BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045766
(663 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224067136|ref|XP_002302373.1| predicted protein [Populus trichocarpa]
gi|222844099|gb|EEE81646.1| predicted protein [Populus trichocarpa]
Length = 680
Score = 789 bits (2037), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/708 (59%), Positives = 504/708 (71%), Gaps = 73/708 (10%)
Query: 1 MSLPLTPSKRPHDDDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIMFRVLCPVSKIDGV 60
MS LTPSKR HD + TE NGK K Q AG S NQP KS P ++FR+LCP KI V
Sbjct: 1 MSTALTPSKRLHDSKS-TETNGKGKRQNTAGTNSPNQPLKSSPAAVVFRILCPAPKIGTV 59
Query: 61 IGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGR 120
G+ G ++SQI Q+TG + VEE + G DE+++VI SD E E SIE+S+ +G
Sbjct: 60 TGEGGAVISQIRQETGAKVIVEENIPGCDEQIIVITGSD------EKTEVSIEQSKKDGD 113
Query: 121 EEASVADESDNKKEDSVNEG---SVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVA 177
EEA+VA+ESDNK + + E V ++ + KETS +QKALLLV +M E +P T+
Sbjct: 114 EEANVAEESDNKNDGNEKEEEKEGVPVEDSGTVKETSSMQKALLLVSGKMFEADPVTDGG 173
Query: 178 DQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI-------------DKLPTCALASDE 224
D+EN K S F+LRLLVLS+QVGCLLGKGG VIKQ+ D+LP C+ SDE
Sbjct: 174 DEENNKPSTFILRLLVLSSQVGCLLGKGGSVIKQMSAESGAQIRISPRDRLPICSSVSDE 233
Query: 225 VVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTG------------PSHPLPDHS 272
+V+ITGE+D VRKAL+ +S QLL+N PRDH+S P NP+G P L HS
Sbjct: 234 LVEITGEIDAVRKALQSVSKQLLENPPRDHDSFPANPSGTSSHSSGHSHPRPEAYLQRHS 293
Query: 273 VSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVI 332
S +G PYA RD HES + D+ KP P++LTFRLLCH+ERVGGVI
Sbjct: 294 FSGRGKPYAVRSRD--------------RHESVIQDQMKPVPDVLTFRLLCHNERVGGVI 339
Query: 333 GKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIAR 392
GKGG II+ LKQETGCDIKVME VS +EDR+IVISG AHPDDRISAPQDAV+RVQTRIA
Sbjct: 340 GKGGTIIKILKQETGCDIKVMEGVSDSEDRVIVISGLAHPDDRISAPQDAVIRVQTRIAM 399
Query: 393 AIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEE 452
AI N+E+ ++ RLLV+SNQIGCLLGKGG+I++EMRK SGAYIRILGKDQIP CASE+E
Sbjct: 400 AI-SNKEKAIIARLLVSSNQIGCLLGKGGAIMSEMRKSSGAYIRILGKDQIPNCASESEG 458
Query: 453 VVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSPFPSFIGRRELSP 512
VV INGEFE V+EAL QITTRLRHHFF++ FPS++ NP FLDQV PFP ++GR+ELSP
Sbjct: 459 VVQINGEFEVVKEALLQITTRLRHHFFQNLFPSMDHLSNPAFLDQVPPFPPYMGRKELSP 518
Query: 513 PGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLM 572
P SF FD + G PP SF PHDDH FMH+IHRPGMPPH+ + KPWGPQG +
Sbjct: 519 PFH------SFPNFDGMVGAPPHVSFPPHDDHPPFMHNIHRPGMPPHIAERKPWGPQGFV 572
Query: 573 EVGGPMGFPDFVGPPHRRVP-----------------VVVPRSLVPIIQGEDGACLKQIR 615
E GGPMG PDF GPP RR+ V+VPR++VP+I GEDGACLKQIR
Sbjct: 573 EGGGPMGLPDFAGPPQRRISGFGGVSHPAIITSTTIEVIVPRTIVPVIYGEDGACLKQIR 632
Query: 616 QISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSETETT 663
QISDAKITI +PKPGA+ETVIIISGTPEQTHAAQSLIQAFVMSE E++
Sbjct: 633 QISDAKITINEPKPGASETVIIISGTPEQTHAAQSLIQAFVMSERESS 680
>gi|225458964|ref|XP_002283591.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera]
Length = 701
Score = 787 bits (2033), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/711 (61%), Positives = 517/711 (72%), Gaps = 60/711 (8%)
Query: 1 MSLPLTPSKRPHDDDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIMFRVLCPVSKIDGV 60
MS LTPSKR ++ + T+ NGK K QK G YS+NQ K PG ++FRVLCP SK V
Sbjct: 1 MSFSLTPSKRSYER-SLTDSNGKGKWQKSGGFYSQNQSLKISPGTVVFRVLCPASKTGSV 59
Query: 61 IGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGR 120
IGK G ++SQI Q+TGV +RVEETVSG DER+V+I SD ++ EA E+S+ +G
Sbjct: 60 IGKGGTIISQIRQETGVKVRVEETVSGCDERVVLITGSD------KDTEADNEQSKEDGE 113
Query: 121 EEASVADESDNKK--EDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVAD 178
+ + + SD K+ E+ ++ SV ++ EK S VQKALLLVFERM E E ET D
Sbjct: 114 DTKAAEEVSDTKEPGENDEDKESVPVEDSQVEKGISSVQKALLLVFERMAEGESETNGGD 173
Query: 179 QENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI-------------DKLPTCALASDEV 225
+++ KS FV+RLLVLS+QVGCLLGKGG VIKQ+ DKLP CA SDE+
Sbjct: 174 EDSNKSPTFVVRLLVLSSQVGCLLGKGGSVIKQMSAESGAQIRILPRDKLPLCASPSDEL 233
Query: 226 VQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPS-------------HPLPDHS 272
VQITGE+D ++AL+ IS QLL+N PRD++ + NPTG S P P++S
Sbjct: 234 VQITGELDACKQALQSISQQLLENPPRDYDIVSTNPTGSSSHLFGPPLPRSEAQPPPNYS 293
Query: 273 VSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVI 332
+QGAPYA G RD D H P + KFHESG+ KP +ILTFRLLCHDERVGG+I
Sbjct: 294 FPAQGAPYAAGVRDT-DYH-SNTPQLHKFHESGMPGWMKPQ-DILTFRLLCHDERVGGII 350
Query: 333 GKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIAR 392
GKGG II++L+ ETGC+IKV++ V +EDR+I ISG AHPDDRIS QDAVLRVQ+RI R
Sbjct: 351 GKGGTIIKNLQNETGCEIKVLDGVPDSEDRVIFISGSAHPDDRISPAQDAVLRVQSRIVR 410
Query: 393 AIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEE 452
AIPD++E+TV+ RLLV+S QIGCLLGKGG+IIAEMRKLSGA+IRILGKDQIPKCASENEE
Sbjct: 411 AIPDSKEKTVIARLLVSSTQIGCLLGKGGAIIAEMRKLSGAHIRILGKDQIPKCASENEE 470
Query: 453 VVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSPFPSFIGRRELSP 512
VV INGEFEAVQEAL QITTRLRHH FRDAF S+N P NP F DQV PFP ++ RRE SP
Sbjct: 471 VVQINGEFEAVQEALLQITTRLRHHHFRDAF-SVNHPSNPAFTDQVPPFPPYLARREFSP 529
Query: 513 PGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMK----PWGP 568
PGMYSN GPSFHKFDAVG P G FHPHDD + FMH IHR G+PPH+P+ K PWG
Sbjct: 530 PGMYSNLGPSFHKFDAVGVLHPHGGFHPHDDRAPFMHSIHRLGIPPHIPERKPSSAPWGH 589
Query: 569 QGLMEVGGPMGFPDFVGPPHRRVP-----------------VVVPRSLVPIIQGEDGACL 611
QGL+E G P+G DF G P RR+P VVVPRSLVP I GEDG CL
Sbjct: 590 QGLIEGGVPIGLADFAGGPQRRIPGFGGGNQQAIITSTTVEVVVPRSLVPSIYGEDGGCL 649
Query: 612 KQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSETET 662
+QIRQISDAKITIT+PKPGA+ETVIIISGTPEQTHAAQSLIQAFV+SETE+
Sbjct: 650 RQIRQISDAKITITEPKPGASETVIIISGTPEQTHAAQSLIQAFVLSETES 700
>gi|302142130|emb|CBI19333.3| unnamed protein product [Vitis vinifera]
Length = 672
Score = 773 bits (1996), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/709 (60%), Positives = 501/709 (70%), Gaps = 85/709 (11%)
Query: 1 MSLPLTPSKRPHDDDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIMFRVLCPVSKIDGV 60
MS LTPSKR ++ + T+ NGK K QK G YS+NQ K PG ++FRVLCP SK V
Sbjct: 1 MSFSLTPSKRSYER-SLTDSNGKGKWQKSGGFYSQNQSLKISPGTVVFRVLCPASKTGSV 59
Query: 61 IGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGR 120
IGK G ++SQI Q+TGV +RVEETVSG DER+V+I SD E
Sbjct: 60 IGKGGTIISQIRQETGVKVRVEETVSGCDERVVLITGSDKDTE----------------- 102
Query: 121 EEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQE 180
AD +K++DS EK S VQKALLLVFERM E E ET D++
Sbjct: 103 -----ADNEQSKEDDS-----------QVEKGISSVQKALLLVFERMAEGESETNGGDED 146
Query: 181 NTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI-------------DKLPTCALASDEVVQ 227
+ KS FV+RLLVLS+QVGCLLGKGG VIKQ+ DKLP CA SDE+VQ
Sbjct: 147 SNKSPTFVVRLLVLSSQVGCLLGKGGSVIKQMSAESGAQIRILPRDKLPLCASPSDELVQ 206
Query: 228 ITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPS-------------HPLPDHSVS 274
ITGE+D ++AL+ IS QLL+N PRD++ + NPTG S P P++S
Sbjct: 207 ITGELDACKQALQSISQQLLENPPRDYDIVSTNPTGSSSHLFGPPLPRSEAQPPPNYSFP 266
Query: 275 SQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGK 334
+QGAPYA G RD D H P + KFHESG+ KP +ILTFRLLCHDERVGG+IGK
Sbjct: 267 AQGAPYAAGVRDT-DYH-SNTPQLHKFHESGMPGWMKPQ-DILTFRLLCHDERVGGIIGK 323
Query: 335 GGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAI 394
GG II++L+ ETGC+IKV++ V +EDR+I ISG AHPDDRIS QDAVLRVQ+RI RAI
Sbjct: 324 GGTIIKNLQNETGCEIKVLDGVPDSEDRVIFISGSAHPDDRISPAQDAVLRVQSRIVRAI 383
Query: 395 PDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVV 454
PD++E+TV+ RLLV+S QIGCLLGKGG+IIAEMRKLSGA+IRILGKDQIPKCASENEEVV
Sbjct: 384 PDSKEKTVIARLLVSSTQIGCLLGKGGAIIAEMRKLSGAHIRILGKDQIPKCASENEEVV 443
Query: 455 LINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPG 514
INGEFEAVQEAL QITTRLRHH FRDAF S+N P NP F DQV PFP ++ RRE SPPG
Sbjct: 444 QINGEFEAVQEALLQITTRLRHHHFRDAF-SVNHPSNPAFTDQVPPFPPYLARREFSPPG 502
Query: 515 MYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMK----PWGPQG 570
MYSN GPSFHKFDAVG P G FHPHDD + FMH IHR G+PPH+P+ K PWG QG
Sbjct: 503 MYSNLGPSFHKFDAVGVLHPHGGFHPHDDRAPFMHSIHRLGIPPHIPERKPSSAPWGHQG 562
Query: 571 LMEVGGPMGFPDFVGPPHRRVP-----------------VVVPRSLVPIIQGEDGACLKQ 613
L+E G P+G DF G P RR+P VVVPRSLVP I GEDG CL+Q
Sbjct: 563 LIEGGVPIGLADFAGGPQRRIPGFGGGNQQAIITSTTVEVVVPRSLVPSIYGEDGGCLRQ 622
Query: 614 IRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSETET 662
IRQISDAKITIT+PKPGA+ETVIIISGTPEQTHAAQSLIQAFV+SETE+
Sbjct: 623 IRQISDAKITITEPKPGASETVIIISGTPEQTHAAQSLIQAFVLSETES 671
>gi|255537898|ref|XP_002510014.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223550715|gb|EEF52201.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 679
Score = 716 bits (1848), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/713 (59%), Positives = 510/713 (71%), Gaps = 84/713 (11%)
Query: 1 MSLPLTPSKRPHDDDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIMFRVLCPVSKIDGV 60
MS LTP+KRPHD NHTE NGK K QK N P + G++FR+LCP SK G+
Sbjct: 1 MSTALTPAKRPHDR-NHTETNGKSKLQKTV-----NSPVR----GVVFRILCPASKTGGI 50
Query: 61 IGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGR 120
IGK G ++SQI Q+TG +RVEETV GSDER+V+I A +K+ N E + S++
Sbjct: 51 IGKGGAIISQIRQETGAKVRVEETVPGSDERVVIIAAGSDKEMEVNNAEQNRGDSDD--- 107
Query: 121 EEASVADESDNKK----EDSVNEGSVLMD-GLNSEKETSKVQKALLLVFERMVEVEPETE 175
+E +V +ES+ K+ ED N+ +V ++ S +ETS +QKAL+LVFERM+E EPE +
Sbjct: 108 KEPNVGEESNGKQAGSDEDDENKETVSVEHSTKSVRETSSLQKALVLVFERMLEAEPEMD 167
Query: 176 VADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI-------------DKLPTCALAS 222
++E K S LRLLVLS+QVGCLLGKGG VIKQ+ DKLP CA +
Sbjct: 168 EGNEEKKKPSMSTLRLLVLSSQVGCLLGKGGSVIKQMSAESGAQIRILPRDKLPICASPT 227
Query: 223 DEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPS-----HPLPD------- 270
DE+VQI GEVD +RKAL+ ++ QLL+N P+D E+ P TGPS HPLP
Sbjct: 228 DELVQIAGEVDAIRKALQSVAQQLLENPPKDPEAYPPISTGPSSHSFGHPLPRPEAYPPP 287
Query: 271 -HSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVG 329
HS +++G Y G R+ FHE G+ R +P+P++LTFRLLC DE+VG
Sbjct: 288 YHSFNARGTTYGAGPRE--------------FHEGGMPGRMRPAPDMLTFRLLCLDEKVG 333
Query: 330 GVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTR 389
GVIGKGGAII++L+QETGC+IKV+E VS +EDR+I+ISGPAHPDDRISA QDAVLRVQTR
Sbjct: 334 GVIGKGGAIIKTLQQETGCEIKVLEGVSDSEDRIILISGPAHPDDRISAAQDAVLRVQTR 393
Query: 390 IARAIP--DNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCA 447
IARA+P + +E+ V+ RLLV+SNQIGCLLGKGG+I+AEMRK +GAYIRILGKDQIPKCA
Sbjct: 394 IARALPLPEGKEKAVIGRLLVSSNQIGCLLGKGGAIMAEMRKSTGAYIRILGKDQIPKCA 453
Query: 448 SENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSPFPSFIGR 507
SENEEVV INGE E VQEAL QITTRLR+HFFRD FPSI+ P NP FLDQ PFP ++GR
Sbjct: 454 SENEEVVQINGEHEVVQEALLQITTRLRNHFFRDVFPSIDHPSNPAFLDQAPPFPPYMGR 513
Query: 508 RELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWG 567
RELSPP +FH FD +GGPPPP FHPHDDHS FMH+IHRPGMPPH + KPWG
Sbjct: 514 RELSPPFH------AFHSFDGMGGPPPPVGFHPHDDHSPFMHNIHRPGMPPHF-ERKPWG 566
Query: 568 PQGLMEVGGPMGFPDFVGPPHRRV--------PVVVPRSL---------VPIIQGEDGAC 610
PQGLME GGPMG P+F G P RR+ P ++ + VP+I GEDGAC
Sbjct: 567 PQGLMEAGGPMGLPEFGGHPQRRISGFGGVNHPAIITSTTVEVVVPRSVVPVIYGEDGAC 626
Query: 611 LKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSETETT 663
LKQIRQISDAKIT+T+PKPGA ETVIIISGTPEQTHAAQSLIQAFVMSE E+
Sbjct: 627 LKQIRQISDAKITVTEPKPGAAETVIIISGTPEQTHAAQSLIQAFVMSERESA 679
>gi|147845094|emb|CAN78473.1| hypothetical protein VITISV_026793 [Vitis vinifera]
Length = 709
Score = 704 bits (1817), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/665 (59%), Positives = 471/665 (70%), Gaps = 60/665 (9%)
Query: 1 MSLPLTPSKRPHDDDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIMFRVLCPVSKIDGV 60
MS LTPSKR ++ + T+ NGK K QK G YS+NQ K PG ++FRVLCP SK V
Sbjct: 1 MSFSLTPSKRSYER-SLTDSNGKGKWQKSGGFYSQNQSLKISPGTVVFRVLCPASKTGSV 59
Query: 61 IGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGR 120
IGK G ++SQI Q+TGV +RVEETVSG DER+V+I SD ++ EA E+S+ +G
Sbjct: 60 IGKGGTIISQIRQETGVKVRVEETVSGCDERVVLITGSD------KDTEADNEQSKEDGE 113
Query: 121 EEASVADESDNKK--EDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVAD 178
+ + + SD K+ E+ ++ SV ++ EK S VQKALLLVFERM E E ET D
Sbjct: 114 DTKAAEEVSDTKEPGENDEDKESVPVEDSQVEKGISSVQKALLLVFERMAEGESETNGGD 173
Query: 179 QENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI-------------DKLPTCALASDEV 225
+++ KS FV+RLLVLS+QVGCLLGKGG VIKQ+ DKLP CA SDE+
Sbjct: 174 EDSNKSPTFVVRLLVLSSQVGCLLGKGGSVIKQMSAESGAQIRILPRDKLPLCASPSDEL 233
Query: 226 VQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPS-------------HPLPDHS 272
VQITGE+D ++AL+ IS QLL+N PRD++ + NPTG S P P++S
Sbjct: 234 VQITGELDACKQALQSISQQLLENPPRDYDIVSTNPTGSSSHLFGPPLPRSEAQPPPNYS 293
Query: 273 VSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVI 332
+QGAPYA G RD D H P + KFHESG+ KP +ILTFRLLCHDERVGG+I
Sbjct: 294 FPAQGAPYAAGVRDT-DYH-SNTPQLHKFHESGMPGXMKPQ-DILTFRLLCHDERVGGII 350
Query: 333 GKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIAR 392
GKGG II++L+ ETGC+IKV++ V +EDR+I ISG AHPDDRIS QDAVLRVQ+RI R
Sbjct: 351 GKGGTIIKNLQNETGCEIKVLDGVPDSEDRVIFISGSAHPDDRISPAQDAVLRVQSRIVR 410
Query: 393 AIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEE 452
AIPD++E+TV+ RLLV+S QIGCLLGKGG+IIAEMRKLSGA+IRILGKDQIPKCASENEE
Sbjct: 411 AIPDSKEKTVIARLLVSSTQIGCLLGKGGAIIAEMRKLSGAHIRILGKDQIPKCASENEE 470
Query: 453 VVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSPFPSFIGRRELSP 512
VV INGEFEAVQEAL QITTRLRHH FRDAF S+N P NP F DQV PFP ++ RRE SP
Sbjct: 471 VVQINGEFEAVQEALLQITTRLRHHHFRDAF-SVNHPSNPAFTDQVPPFPPYLARREFSP 529
Query: 513 PGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMK----PWGP 568
PGMYSN GPSFHKFDAVG P G FHPHDD + FMH IHR G+PPH+P+ K PWG
Sbjct: 530 PGMYSNLGPSFHKFDAVGVLHPHGGFHPHDDRAPFMHSIHRLGIPPHIPERKPSSAPWGH 589
Query: 569 QGLMEVGGPMGFPDFVGPPHRRVP-----------------VVVPRSLVPIIQGEDGACL 611
QGL+E G P+G DF G P RR+P VVVPRSLVP I GEDG CL
Sbjct: 590 QGLIEGGVPIGLADFAGGPQRRIPGFGGGNQQAIITSTTVEVVVPRSLVPSIYGEDGGCL 649
Query: 612 KQIRQ 616
+QIRQ
Sbjct: 650 RQIRQ 654
>gi|356507955|ref|XP_003522728.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 678
Score = 686 bits (1771), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/703 (53%), Positives = 477/703 (67%), Gaps = 69/703 (9%)
Query: 5 LTPSKRPHDDDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIMFRVLCPVSKIDGVIGKD 64
+ SKRP+ PNG+ K +K +G +S P PG ++FR+LC S+I VIGK
Sbjct: 1 MASSKRPN-----AGPNGRGKRRKSSGGFS---PLDVSPGSVVFRLLCHASRIGSVIGKG 52
Query: 65 GEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNK---------KETSENLEASIERS 115
G ++SQI +TGV +++EE V G DER++ I SD + KE ++N + S
Sbjct: 53 GSIISQIRLETGVKVKIEEAVPGCDERVITISGSDKEAEEYTAEQGKEVNDNDDVG---S 109
Query: 116 ENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETE 175
E EE + +D N ED + +V ++ SEK S + KA+ LVFERMVE ET
Sbjct: 110 EGKDGEEKNGSD--GNGNEDKEEKDAVPVEDSKSEKGNSAIWKAISLVFERMVEGVEETT 167
Query: 176 VADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI-------------DKLPTCALAS 222
D+E+ KSS F LRLL+L+ QVGC+LGKGG VIK++ DK+P CA A
Sbjct: 168 EGDEESNKSSSFFLRLLILTAQVGCVLGKGGSVIKRMAAESGAQIRILPKDKVPVCASAF 227
Query: 223 DEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPS------HPLPDHSVSSQ 276
DE+VQI+G V+ VRKAL+ +S QLL+N PRDHES+ TGPS P +HS ++Q
Sbjct: 228 DEIVQISGSVEVVRKALQSVSQQLLENPPRDHESLSAKSTGPSSHSFGQFPPHNHSFAAQ 287
Query: 277 GAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGG 336
G P+ATG D++ H PP IPKFHE+ + R +P E+LTFRLLC ERVG +IGKGG
Sbjct: 288 GEPFATGPHDISAFH-SAPPLIPKFHEAAIHGRTRPLQEMLTFRLLCPVERVGNIIGKGG 346
Query: 337 AIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPD 396
AII++++QET +IKV+EA +ED +IVISGPAHP+DR+S Q+AV RVQTRIA+ IPD
Sbjct: 347 AIIKTVQQETVSEIKVLEAPPDSEDCVIVISGPAHPEDRVSPVQEAVFRVQTRIAKPIPD 406
Query: 397 NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLI 456
+ T++ R LV+SNQIGCLLGKGGSII EMRK SGA+IRILGKD++PKCASE+EEV+ +
Sbjct: 407 ANDHTMLARFLVSSNQIGCLLGKGGSIITEMRKKSGAHIRILGKDKVPKCASEDEEVIQV 466
Query: 457 NGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMY 516
NGE EAV EAL QITTRL+HHFFRD++PS+N P N FLDQ+ PFP ++GRR LSPPGMY
Sbjct: 467 NGEIEAVHEALLQITTRLKHHFFRDSYPSVNYPSNSPFLDQLPPFPPYLGRRGLSPPGMY 526
Query: 517 SNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGG 576
S+ GPPP + P DD AF+++IHRPG+PPH+ KPWGP G++E G
Sbjct: 527 SDL-----------GPPPSHAGFPLDDRPAFLNNIHRPGLPPHISQRKPWGPLGVLEGGT 575
Query: 577 PMGFPDFVGPPHRRV--------PVVVPRS--------LVPIIQGEDGACLKQIRQISDA 620
P+G PDF P RR+ P++ + +VP+I GEDG CLKQI QISDA
Sbjct: 576 PIGLPDFPRGPPRRISGFAGGSQPIITSTTVEVVVPRAVVPVIYGEDGECLKQILQISDA 635
Query: 621 KITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSETETT 663
ITITDPKPGA ET IIISGTPEQTHAAQSLIQAFVMSE E+
Sbjct: 636 NITITDPKPGAVETKIIISGTPEQTHAAQSLIQAFVMSERESV 678
>gi|356518382|ref|XP_003527858.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 676
Score = 675 bits (1742), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/698 (53%), Positives = 476/698 (68%), Gaps = 61/698 (8%)
Query: 5 LTPSKRPHDDDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIMFRVLCPVSKIDGVIGKD 64
+T SKRP+ PNG+ K ++ +G +S S PG ++FR+LC S+I GVIGK
Sbjct: 1 MTSSKRPN-----AGPNGRGKRRRSSGGFSSLGVS---PGSVVFRLLCHASRIGGVIGKG 52
Query: 65 GEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSE-NLEASIERSENN-GREE 122
G ++SQI Q+TGV +R+EE V G DER++ I S+ KET E N E E ++N+ G E
Sbjct: 53 GSIISQIRQETGVKLRIEEAVPGCDERVITISGSE--KETEEDNTEQGKEVNDNDDGGSE 110
Query: 123 ASVADESDNK--KEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQE 180
+E D+ ED + +V ++ SEK S + KA+ LVFERMVE ET D+E
Sbjct: 111 GKDREEKDDGDGNEDKREKDAVPVEDSKSEKGNSAIWKAISLVFERMVEGVEETTEGDEE 170
Query: 181 NTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI-------------DKLPTCALASDEVVQ 227
+ K S F LRLL+L+ QVGC+LGKGG VIK++ DKLP CA ASDE+VQ
Sbjct: 171 SNKPSSFFLRLLILTAQVGCVLGKGGSVIKRMAAESGAQIRILPKDKLPACASASDEIVQ 230
Query: 228 ITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPS------HPLPDHSVSSQGAPYA 281
I+G V+ VRKAL+ +S QLL+N PRDH+S+ TGPS P + S S+QG P+A
Sbjct: 231 ISGSVEVVRKALQSVSQQLLENPPRDHDSLSAKSTGPSSHSFGQFPPHNRSFSAQGEPFA 290
Query: 282 TGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRS 341
+G D++ H P IPKFHE+ + R +P E+LTFRLLC ERVG +IGKGGAII++
Sbjct: 291 SGPHDISAFH-SAAPLIPKFHEAAIHGRMRPLQEMLTFRLLCPAERVGNIIGKGGAIIKT 349
Query: 342 LKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQT 401
++QET +IKV+EA +ED +IVISGPAHP+DRIS Q+AV RVQTRIA+ IPD ++
Sbjct: 350 VQQETASEIKVLEAPPDSEDCVIVISGPAHPEDRISPVQEAVFRVQTRIAKPIPDAKDHI 409
Query: 402 VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFE 461
++ R LV+S QIGCLLGKGGSII EMRK SGA+IRILGKD++PKCASE+EEV+ +NGE E
Sbjct: 410 MLARFLVSSTQIGCLLGKGGSIITEMRKKSGAHIRILGKDKVPKCASEDEEVIQVNGEIE 469
Query: 462 AVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGP 521
AV +AL QITTRL+HH FRD++PS+N P N FLDQ+ PFP ++GRR LSPP MYS+
Sbjct: 470 AVHDALLQITTRLKHHCFRDSYPSVNYPSNSPFLDQLPPFPPYLGRRGLSPPRMYSDL-- 527
Query: 522 SFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFP 581
G P P + P DD F++ IHRPG+PPH+ + KPWGPQG++E G P+G P
Sbjct: 528 ---------GHPHPHAGFPLDDRPPFLNSIHRPGLPPHISERKPWGPQGILEGGIPIGLP 578
Query: 582 DFVGPPHRRV--------PVVVPRS--------LVPIIQGEDGACLKQIRQISDAKITIT 625
DF G P RR+ P++ + +VP+I GEDG CLKQI QISDA ITIT
Sbjct: 579 DFPGGPPRRISGFAGGSQPIITSTTVEVVVPRAVVPVIYGEDGECLKQILQISDANITIT 638
Query: 626 DPKPGATETVIIISGTPEQTHAAQSLIQAFVMSETETT 663
DPKPG ET IIISGTPEQTHAAQSLIQAFVMSE E+
Sbjct: 639 DPKPGTVETKIIISGTPEQTHAAQSLIQAFVMSERESV 676
>gi|449436912|ref|XP_004136236.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
gi|449522219|ref|XP_004168125.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 693
Score = 669 bits (1727), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/706 (52%), Positives = 473/706 (66%), Gaps = 56/706 (7%)
Query: 1 MSLPLTPSKRPHDDDNHTEPNGKEKSQKLAGDYSE-NQPSKSFPGGIMFRVLCPVSKIDG 59
MS PLTPSKR D + + NGK K QK +G S NQ K PG +FRVL PVS+ID
Sbjct: 1 MSAPLTPSKRSRDRSS-VKSNGKGKWQKSSGSRSRRNQSFKLSPGYAVFRVLFPVSRIDS 59
Query: 60 VIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNG 119
++G+DG+ +S+I ++TGV IRVE+T+ G DER+ VI S+ +ET N E + N
Sbjct: 60 LVGRDGDGLSKIREETGVEIRVEDTIPGCDERIAVIGGSN--QETEVNPEKKSKEDNKNS 117
Query: 120 REEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQ 179
E + D + KK++ + V D E S+++KAL LV E++ + EPE + D
Sbjct: 118 EVEENDGDIAKLKKKEDKDSPPV-EDAKQKEVTHSQLRKALFLVSEKIFDEEPEADGTDV 176
Query: 180 ENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI-------------DKLPTCALASDEVV 226
E K F+LRLLVLS+QVGCLLGKGG V+KQ+ DKLP + E+V
Sbjct: 177 EGDKLPTFILRLLVLSSQVGCLLGKGGSVVKQMSSDSGAQIRILPRDKLPPFVATNVELV 236
Query: 227 QITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGP-----------SHPLP-DHSVS 274
QI+G +D V+KAL+L+ QL++N P D + + + +H P S +
Sbjct: 237 QISGGIDVVKKALELVFQQLIENPPNDKDPVASSNAAQSSRSSGQSLSRAHESPRGSSFN 296
Query: 275 SQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGK 334
+ G PY+ RDV + H P PK +E+ + R KPS EIL++RLLC ERVG VIGK
Sbjct: 297 THGGPYSV-PRDVGNFHSSAPSLAPKQYEACIPGRSKPSHEILSYRLLCPTERVGNVIGK 355
Query: 335 GGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAI 394
GGAI+++L+Q+TGCDIKV++ +EDR+I+++GPAHPDDRIS QDAV RVQ RI +A
Sbjct: 356 GGAIVKTLQQDTGCDIKVVDGALDSEDRIILVAGPAHPDDRISPVQDAVFRVQARIVKAA 415
Query: 395 PDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVV 454
D++EQ ++ R LV+SNQIGCLLGKGGSIIAEMRK +GAYIRILGK+QIPKCA E+EEVV
Sbjct: 416 ADSKEQNLVARFLVSSNQIGCLLGKGGSIIAEMRKSTGAYIRILGKEQIPKCAGEDEEVV 475
Query: 455 LINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPG 514
INGE E VQ+A+FQITTRLRHHFFRDAFPS+N NP F+D++ FPS+ GRRELSPPG
Sbjct: 476 QINGEPETVQDAMFQITTRLRHHFFRDAFPSVNSHSNPAFIDRLPSFPSYFGRRELSPPG 535
Query: 515 MYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEV 574
+YS+ GPSFHKFDA+ G P DD F+ HRPG P + D KPW QGL+E
Sbjct: 536 IYSSLGPSFHKFDALSGIPSLSDL--RDDRPPFL---HRPGA-PLLSDRKPWSSQGLVE- 588
Query: 575 GGPMGFPDFVGPPHRR-----------------VPVVVPRSLVPIIQGEDGACLKQIRQI 617
G +G DF G HRR V VVVPR++VP+I GE+G CLKQIRQI
Sbjct: 589 -GGVGLSDFAGAHHRRIAGFGGGNSPAIITSTTVEVVVPRNIVPVICGENGECLKQIRQI 647
Query: 618 SDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSETETT 663
SDAKITIT+PK G ET+IIISGTPEQTHAAQSLIQAFV+SETE++
Sbjct: 648 SDAKITITEPKQGDVETMIIISGTPEQTHAAQSLIQAFVISETESS 693
>gi|357466759|ref|XP_003603664.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355492712|gb|AES73915.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 662
Score = 611 bits (1575), Expect = e-172, Method: Compositional matrix adjust.
Identities = 351/692 (50%), Positives = 461/692 (66%), Gaps = 69/692 (9%)
Query: 8 SKRPHDDDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIMFRVLCPVSKIDGVIGKDGEM 67
+KRP +E N + K +K +G +S S S ++FR+LCP SKI GVIGK G +
Sbjct: 2 TKRP----KKSESNRRPKRRKPSGVFSPLDVSSS----VVFRLLCPASKIGGVIGKGGSI 53
Query: 68 MSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSE-NLEASIERSENNGREEASVA 126
+SQI +TGV +++EE V G +ER++ KE+ E + E E ++N+ E
Sbjct: 54 ISQIRHETGVKVKIEEPVPGCEERVITF-----LKESEEGSAEQGKEVNDNDESESKVKD 108
Query: 127 DESDNKKEDSVNEGSVLMDGLNSEKETSK--VQKALLLVFERMVEVEPETEVADQENTKS 184
DE +D+ ++ SV ++ SEK S + +A++LVFER+ E E E +K
Sbjct: 109 DEEKGNGDDNEDKDSVSVEDSQSEKVNSNPTIMRAVMLVFERVAEDEGGDE------SKK 162
Query: 185 SKFVLRLLVLSTQVGCLLGKGGCVIKQI-------------DKLPTCALASDEVVQITGE 231
F LRLL+LS QVGC+LGKGG VIK++ +++P CA SDE+VQITG
Sbjct: 163 GYFGLRLLILSNQVGCILGKGGSVIKRMSAESGAQIRILPKEEIPACASDSDELVQITGG 222
Query: 232 VDTVRKALKLISHQLLDNSPRDHESIPGNPTGPS------HPLPDHSVSSQGAPYATGHR 285
V+ VR+AL+ + QL++NSPRDHES+P N TGPS P + + QGA +ATG
Sbjct: 223 VEVVRRALQSVFQQLVENSPRDHESLPTNLTGPSSHSYGQFPPNKRTFAGQGASFATGPN 282
Query: 286 DVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQE 345
++ H P IPKFHE +L R +P PEILTFRLLC E VG +IGKGG+II+ L+QE
Sbjct: 283 EIPVFH--SAPMIPKFHEGAILGRMRPPPEILTFRLLCPSESVGNLIGKGGSIIKMLQQE 340
Query: 346 TGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTR 405
T +IKV+EA+ G+ED +I+ISGPAHPDDRIS Q+A+ RVQ RI+RA+ D++E +++ R
Sbjct: 341 TASEIKVIEAIPGSEDCIIIISGPAHPDDRISPVQEAIFRVQNRISRAMLDSKEHSMLAR 400
Query: 406 LLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQE 465
++V+S IGCLLGKGGSIIAEMR LSGA+IR+LGKD+ PKC SE++EV+ ++G EAV +
Sbjct: 401 VIVSSKHIGCLLGKGGSIIAEMRNLSGAHIRMLGKDKGPKCVSEDDEVIQVSGVIEAVHD 460
Query: 466 ALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHK 525
AL QITTRLR++FFRDAFPS N P N FLDQ SPFP ++GRR LSPPGMYS+ GP
Sbjct: 461 ALLQITTRLRNNFFRDAFPSANFPSNSAFLDQHSPFPPYLGRRGLSPPGMYSDLGPRH-- 518
Query: 526 FDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVG 585
P + P DDH FM++++R G+PP + + KPWGP+G++E GG MG P+F G
Sbjct: 519 ---------PHADFPLDDHPPFMNNMYRSGIPPLISERKPWGPKGILEGGGHMGLPEFAG 569
Query: 586 PPHR---------------RVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPG 630
P R V VVVPR+LV I GE+G CLKQI QISDA + ITDP PG
Sbjct: 570 GPRRISGFAGGSQPIITSTTVEVVVPRALVAEIYGENGECLKQILQISDANVIITDPIPG 629
Query: 631 ATETVIIISGTPEQTHAAQSLIQAFVMSETET 662
A ET IIISGTPEQT+AAQSLIQAFVMSE E+
Sbjct: 630 AVETKIIISGTPEQTNAAQSLIQAFVMSERES 661
>gi|357128987|ref|XP_003566150.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 729
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 289/757 (38%), Positives = 400/757 (52%), Gaps = 130/757 (17%)
Query: 1 MSLPLTPSKRPHDDDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIMFRVLCPVSKIDGV 60
M+ + PSKRP N +E NG+ K QK S+ P PG + R+LCP K V
Sbjct: 1 MASNVNPSKRPFQK-NSSEHNGRGKWQKTKHTSSQQPPLVIQPGVPLIRILCPTEKCGNV 59
Query: 61 IGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSE------------NL 108
IGK G ++++I Q+ GV IRV+E V G DER++VI ++ KE S +
Sbjct: 60 IGKGGVIIAKIRQENGVKIRVDEAVPGCDERVIVITITEKDKEASREQGKQNVGGAAVSA 119
Query: 109 EASIER-----------SENNGREEASVADESDNKKEDSV----NEGSVLMDGLNSEKET 153
+A E+ SENN +E V E+++ KE+ V N G + ++SE++
Sbjct: 120 DAEHEKEKDHIKEENVDSENNHGKEEKVDSENNHGKEEKVDSENNHGK--EEKVDSERDA 177
Query: 154 SKVQK----------------------ALLLVFERMVEVEPETEVADQENTKSSKFVLRL 191
SK +K A+L VF+R+ E E D ++ RL
Sbjct: 178 SKEEKDDPSVAKDTKAEPERVLLSPMNAILHVFDRIFITEIGNESGDPSGERTP-VSFRL 236
Query: 192 LVLSTQVGCLLGKGGCVIKQI------------DKLPTCALASDEVVQITGEVDTVRKAL 239
LVL +QVG LLG G VIKQ+ +KLP CAL DE+ QITGE+D+VRK L
Sbjct: 237 LVLDSQVGWLLGNRGSVIKQMSADSGCEIRVSKEKLPLCALLKDELCQITGELDSVRKGL 296
Query: 240 KLISHQLLDNSPRDHESIPGNPTG---------PSHPLPDHSVSSQGAPYATGHRDVADI 290
++ LL + PR+ + +P + P P+ S+ QG +A G D D
Sbjct: 297 NAVAQVLLTHPPRESDVLPSGLSSHAFNRSDALPPGMQPNFSLPFQGPSHARGPFDSIDP 356
Query: 291 HLPMPP------------SIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAI 338
+PP P F ++ + PE LTFRLLC ++VG +IGKGG
Sbjct: 357 RPNIPPFPTFPDQRSNIPPFPAFPDALMHSHASVPPEPLTFRLLCSSDKVGSIIGKGGNN 416
Query: 339 IRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNR 398
I++++++TGC+IK++E V +EDR+IVISGPAHP D IS Q+A+L VQ RI +N+
Sbjct: 417 IKTIQKDTGCEIKILETVPKSEDRVIVISGPAHPGDGISPAQNAILHVQRRITPPTANNK 476
Query: 399 EQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLING 458
E ++RL+V+ NQ+GCLLGKGGSIIAEMRKLS A+I +L KD+IPK E++EVV I G
Sbjct: 477 EGAAISRLIVSPNQVGCLLGKGGSIIAEMRKLSKAHIVVLSKDKIPKGVQESDEVVQITG 536
Query: 459 EFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSN 518
+ EA+QEAL QIT RLR+H FRD ++ + P F F +F G E + P +Y N
Sbjct: 537 DSEAIQEALMQITARLRNHLFRDRMAAMGPNMQPPFGSLDPQFGAFAGSHESTSPRIYPN 596
Query: 519 FGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPM 578
FHK D +G P D+ A PW +G+ +VG PM
Sbjct: 597 -ASQFHK-DFMG--------RPLDEMPA------------------PWNAKGMRDVGDPM 628
Query: 579 GFPDFVGPPHRRV----------------PVVVPRSLVPIIQGEDGACLKQIRQISDAKI 622
G PHR + ++VPR ++P + G DG CL IR+ S A I
Sbjct: 629 SISGMPGMPHRGIGGFSGAGHSSMPNITRDIMVPRFVIPALCGHDGGCLNMIREFSGAMI 688
Query: 623 TITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
T T+P A +T +ISGT +Q HAA+SLIQAFV+SE
Sbjct: 689 TFTEPIADAADTPFMISGTLDQMHAARSLIQAFVLSE 725
>gi|222618061|gb|EEE54193.1| hypothetical protein OsJ_01028 [Oryza sativa Japonica Group]
Length = 748
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 295/735 (40%), Positives = 394/735 (53%), Gaps = 120/735 (16%)
Query: 6 TPSKRPHDDDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIMFRVLCPVSKIDGVIGKDG 65
TPSKRP N +E NG+ K QK + + PG +FR+LCP SK VIGK G
Sbjct: 49 TPSKRPFQK-NSSEQNGRGKWQKTKHNSLQQPQLIVQPGVPIFRILCPTSKSGNVIGKGG 107
Query: 66 EMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS-------------------- 105
++++I Q+TGV IRV+E V G DER++VI A D +E S
Sbjct: 108 GIIAKIRQETGVKIRVDEVVPGCDERVIVITAIDKDREVSHVQTKENDGGVACSVDGNHG 167
Query: 106 -ENLEASIERSENN----------GREEASVADESDNKKED----------SVNEGSVLM 144
E E+ E+N G+EE E D+ KED ++ SV
Sbjct: 168 MEKDHTKEEKDESNKEMDDSEKGLGKEEKDDL-EKDHDKEDRDESGKDNDKKADDSSVAK 226
Query: 145 DG-------LNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQ 197
D L EK KA+LLVF+R+ E E D + + LRLLVL +Q
Sbjct: 227 DTNSEPEAQLELEKGMPLAVKAILLVFDRIFVNEMENGTGDASGER-NHVSLRLLVLDSQ 285
Query: 198 VGCLLGKGGCVIKQI------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQ 245
VG LLGK G VIKQ+ DKLP CAL DE+ QITGE+D+VRK L ++
Sbjct: 286 VGWLLGKNGSVIKQMSTDSCCEIRVSKDKLPLCALPRDELCQITGELDSVRKGLNTVAQL 345
Query: 246 LLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMP----PSIPKF 301
L + P++ + + + +G S S +Q G + ++HLP +P F
Sbjct: 346 LFTHPPKESDVLGAHNSGSS-----RSFFNQPDVLPPGMQ--PNLHLPFQGPNVAHLPNF 398
Query: 302 HESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTED 361
E+ + PE LTFRLLC ++VGG+IGKGG I+S++ +TGC+IKV++ V +ED
Sbjct: 399 PEALMHGHGSVPPEPLTFRLLCSSDKVGGIIGKGGNNIKSIQNDTGCEIKVLDTVPKSED 458
Query: 362 RLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGG 421
R++ ISGPAHP D IS Q+A+L VQ +I + +E + RL+V+ NQ+GCLLGKGG
Sbjct: 459 RIVFISGPAHPGDGISPAQNAILHVQRKIV-PTSNTKEGPAICRLIVSPNQVGCLLGKGG 517
Query: 422 SIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRD 481
SIIAEMRKLSGA+I +L KD+IPK EN+EVV I+G EA+QEAL QIT RLR+H FRD
Sbjct: 518 SIIAEMRKLSGAHIIVLSKDKIPKGVPENDEVVQISGASEAIQEALMQITARLRNHLFRD 577
Query: 482 AFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPH 541
S + P F F S+ G + P ++ N P FHK D +G P
Sbjct: 578 RMASTVPNVQPPFGLVDPQFGSYAGNHDSISPRIFPNV-PQFHK-DFIG--------RPL 627
Query: 542 DDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHR------------ 589
D+ SA PW +G+ VG P+ PD G HR
Sbjct: 628 DEMSA------------------PWTMKGMQVVGDPISLPDIPGMAHRGMGGFPGPGQPS 669
Query: 590 -----RVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQ 644
V+VP+ ++P + GEDG CL +IR+ S AKIT+ DP A +T I+ISGTP+Q
Sbjct: 670 IVSTITADVMVPKLVLPSLCGEDGGCLNRIREFSGAKITVADPMGNAMDTAILISGTPDQ 729
Query: 645 THAAQSLIQAFVMSE 659
HAA+SLIQAFV+SE
Sbjct: 730 MHAARSLIQAFVLSE 744
>gi|218187831|gb|EEC70258.1| hypothetical protein OsI_01061 [Oryza sativa Indica Group]
Length = 722
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 295/731 (40%), Positives = 392/731 (53%), Gaps = 138/731 (18%)
Query: 6 TPSKRPHDDDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIMFRVLCPVSKIDGVIGKDG 65
TPSKRP N +E NG+ K QK + + PG +FR+LCP SK VIGK G
Sbjct: 49 TPSKRPFQK-NSSEQNGRGKWQKTKHNSLQQPQLIVQPGVPIFRILCPTSKSGNVIGKGG 107
Query: 66 EMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKE-----TSEN---LEASI----- 112
++++I Q+TGV IRV+E V G DER++VI A D +E T EN + S+
Sbjct: 108 GIIAKIRQETGVKIRVDEVVPGCDERVIVITAIDKDREVSHVQTKENDGGVACSVDGNHG 167
Query: 113 --------ERSENN----------GREEASVADESDNKKED----------SVNEGSVLM 144
E+ E+N G+EE E D+ KED ++ SV
Sbjct: 168 MEKDHTKEEKDESNKEMDDSEKGLGKEEKDDL-EKDHDKEDRDESGKDNDKKADDSSVAK 226
Query: 145 DG-------LNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQ 197
D L EK KA+LLVF+R+ E E D + + LRLLVL +Q
Sbjct: 227 DTNSEPEAQLELEKGMPLAVKAILLVFDRIFVNEMENGTGDASGER-NHVSLRLLVLDSQ 285
Query: 198 VGCLLGKGGCVIKQI------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQ 245
VG LLGK G VIKQ+ DKLP CAL DE+ QITGE+D+VRK L ++
Sbjct: 286 VGWLLGKNGSVIKQMSTDSCCEIRVSKDKLPLCALPRDELCQITGELDSVRKGLNTVAQL 345
Query: 246 LLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESG 305
L + P++ + + + +GP +VA HL P F E+
Sbjct: 346 LFTHPPKESDVLGAHNSGP---------------------NVA--HL------PNFPEAL 376
Query: 306 VLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIV 365
+ PE LTFRLLC ++VGG+IGKGG I+S++ +TGC+IKV++ V +EDR++
Sbjct: 377 MHGHGSVPPEPLTFRLLCSSDKVGGIIGKGGNNIKSIQNDTGCEIKVLDTVPKSEDRIVF 436
Query: 366 ISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIA 425
ISGPAHP D IS Q+A+L VQ +I + +E + RL+V+ NQ+GCLLGKGGSIIA
Sbjct: 437 ISGPAHPGDGISPAQNAILHVQRKIV-PTSNTKEGPAICRLIVSPNQVGCLLGKGGSIIA 495
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPS 485
EMRKLSGA+I +L KD+IPK EN+EVV I+G EA+QEAL QIT RLR+H FRD S
Sbjct: 496 EMRKLSGAHIIVLSKDKIPKGVPENDEVVQISGASEAIQEALMQITARLRNHLFRDRMAS 555
Query: 486 INRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHS 545
+ P F F S+ G + P ++ N P FHK D +G P D+ S
Sbjct: 556 TVPNVQPPFGLVDPQFGSYAGNHDSISPRIFPNV-PQFHK-DFIG--------RPLDEMS 605
Query: 546 AFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHR---------------- 589
A PW +G+ VG P+ PD G HR
Sbjct: 606 A------------------PWTMKGMQVVGDPISLPDIPGMAHRGMGGFPGPGQPSIVST 647
Query: 590 -RVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAA 648
V+VP+ ++P + GEDG CL +IR+ S AKIT+ DP A +T I+ISGTP+Q HAA
Sbjct: 648 ITADVMVPKLVLPSLCGEDGGCLNRIREFSGAKITVADPMGNAMDTAILISGTPDQMHAA 707
Query: 649 QSLIQAFVMSE 659
+SLIQAFV+SE
Sbjct: 708 RSLIQAFVLSE 718
>gi|226530329|ref|NP_001151982.1| nucleic acid binding protein [Zea mays]
gi|195651499|gb|ACG45217.1| nucleic acid binding protein [Zea mays]
gi|224029689|gb|ACN33920.1| unknown [Zea mays]
gi|413947861|gb|AFW80510.1| nucleic acid binding protein [Zea mays]
Length = 705
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 275/757 (36%), Positives = 395/757 (52%), Gaps = 152/757 (20%)
Query: 1 MSLPLTPSKRPHDDDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIMFRVLCPVSKIDGV 60
M+ +TPSKRP ++ +G+ K QK K PG +FR+LCP SK V
Sbjct: 1 MASRMTPSKRPFQR-RSSDYDGRGKWQKTKHPSPHKSQFKIEPGVPIFRILCPASKSGNV 59
Query: 61 IGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGR 120
IGK G ++++I Q+T + IRV+ G DER++ I A++ +E S + EN+G
Sbjct: 60 IGKGGAIIAKIRQETRMRIRVDRAAPGCDERVIFITAANKDEEA-----GSEQGGENDGG 114
Query: 121 EEASVA-----DESDNKKEDSVN----------------EGSVLMDGL----------NS 149
AS D+ +N KE +V+ G +DG +S
Sbjct: 115 AAASTGGDHEKDKDNNSKEQNVDPEENNCNEQNDDSEKGSGKEEIDGFEKDHGTEEKNDS 174
Query: 150 EKETSKVQK----------------------ALLLVFERMVEVEPETEVADQENTKSSKF 187
EKE +K +K A+ LVF+R+ E E + + S+
Sbjct: 175 EKEHNKGEKDDPLVAKVTKLEPERVIPLALKAVSLVFDRIFATEGNNETGNA-SAASAPV 233
Query: 188 VLRLLVLSTQVGCLLGKGGCVIKQI------------DKLPTCALASDEVVQITGEVDTV 235
LR+LVL +Q G LLGKGG V+KQ+ D LP+CAL +D++ QITGE+D+V
Sbjct: 234 SLRMLVLYSQAGWLLGKGGSVVKQMAADNGCEIRVLKDNLPSCALLNDKLCQITGEIDSV 293
Query: 236 RKALKLISHQLLDNSPRDHESIP-------------GNPTG-PSHPLPDHSVSSQGAP-Y 280
RK L +S LL + P++ +++ P G PS + + QG P
Sbjct: 294 RKGLNAVSEVLLAHPPKETDAVADVHSSGSSSRSLFSQPDGLPSGMQSNFHIPLQGPPSQ 353
Query: 281 ATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIR 340
A G D+ D+ P+ H S + E L+FR+LC ++VG +IGKGG I++
Sbjct: 354 ANGPFDIVDLQPPI-----HGHASVAI-------ESLSFRMLCPQDKVGSIIGKGGNIVK 401
Query: 341 SLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQ 400
+++ +TGC+IKV++ V T+DR+I ISGPAHP D IS Q+A+L VQ +I D +E
Sbjct: 402 TIQNDTGCEIKVLDTVPKTDDRIISISGPAHPSDGISPAQNAILHVQRKIMLPSSDKKEG 461
Query: 401 TVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEF 460
RL+V+ NQ+GC+LGKGGSIIAEMRKLSGA+I +L KD+IP+ E++EV+ ING
Sbjct: 462 PATCRLIVSGNQVGCVLGKGGSIIAEMRKLSGAFIVVLSKDKIPRGVPEHDEVIQINGSC 521
Query: 461 EAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFG 520
EA+QEAL Q+T RLR+H FRD P++ + P F F F G E S
Sbjct: 522 EAIQEALMQVTARLRNHLFRDRMPAVGPNMRPPFGLLDPQFGPFSGNHESS--------- 572
Query: 521 PSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGF 580
FHK D +G P D +A PW +G+ ++ P+
Sbjct: 573 SLFHK-DFMG--------RPLDGIAA------------------PWTVKGMRDLSDPVSI 605
Query: 581 PDFVGPPHRR-----------------VPVVVPRSLVPIIQGEDGACLKQIRQISDAKIT 623
D G HR V+VPR ++P++ GEDG CL +IR+ S+AKIT
Sbjct: 606 SDIPGAGHREAGGFPGPGQPSMMPNLTAEVLVPRLVIPVLCGEDGGCLDRIREFSEAKIT 665
Query: 624 ITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSET 660
+ +P A +T ++ISGTPEQ HAA+SL++AFVMSE+
Sbjct: 666 VAEPTADAMDTAVLISGTPEQMHAARSLVEAFVMSES 702
>gi|242055819|ref|XP_002457055.1| hypothetical protein SORBIDRAFT_03g000560 [Sorghum bicolor]
gi|241929030|gb|EES02175.1| hypothetical protein SORBIDRAFT_03g000560 [Sorghum bicolor]
Length = 716
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 274/766 (35%), Positives = 393/766 (51%), Gaps = 159/766 (20%)
Query: 1 MSLPLTPSKRPHDDDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIMFRVLCPVSKIDGV 60
M+ +TPSKRP N ++ NG+ K QK K PG FR+LCP SK V
Sbjct: 1 MASRMTPSKRPFQK-NSSDYNGRGKWQKTKHSSPHKSQFKIEPGVPFFRILCPASKSGNV 59
Query: 61 IGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEA----------------------- 97
IGK G ++++I ++T + IRV+ G DER++ I A
Sbjct: 60 IGKGGAIIAKIREETRMRIRVDRAAPGCDERVIFITAVDKDEEASSERGVENDRGVAAST 119
Query: 98 -------SDNKKETSENLEASIERSEN------NGREEAS--VADESDNKKEDSVNEGSV 142
DN KE +++ E + + +N NG+EE D S +K+DS + +
Sbjct: 120 GAGHDRDGDNSKEGNDDPEGNNSKEQNDDSEKGNGKEEEDGLEKDHSTEEKDDSEKD-HI 178
Query: 143 LMDGLNSEKETSKVQK----------------------ALLLVFERMVEVEPETEVADQE 180
+ +SEKE K +K A+ LVF+R+ E +
Sbjct: 179 REEKDHSEKEHDKEEKDDPFVAKVAESEPERVIPSALKAISLVFDRIFAAGDNNETGNA- 237
Query: 181 NTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI------------DKLPTCALASDEVVQI 228
+ S+ LRLLVL +Q G LLGKGG VIKQ+ D LP+CAL +D++ QI
Sbjct: 238 SAASTPVSLRLLVLYSQAGWLLGKGGSVIKQMSADNGCEIRVLRDNLPSCALLNDKLCQI 297
Query: 229 TGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTG--------------PSHPLPDHSVS 274
TGE+D+VRK L +S LL + P++ +++ G + PS + +
Sbjct: 298 TGEIDSVRKGLNAVSELLLAHPPKETDAVSGVHSSGSSSRSLFNQSDGLPSGMQSNFHIP 357
Query: 275 SQGAPYATGHRDVADIHLPMP--PSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVI 332
QG A G D+ D+ P+ S+P E L+FR+LC ++VG +I
Sbjct: 358 LQGPSQANGPFDIIDLQPPIHGHASVPI--------------ESLSFRMLCPQDKVGSII 403
Query: 333 GKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIAR 392
GKGG I+++++++TGC+IKV++ V +EDR+I ISGPAHP D IS Q+A+L VQ +I
Sbjct: 404 GKGGNIVKTIQKDTGCEIKVLDTVPKSEDRIISISGPAHPSDGISPAQNAILHVQRKIML 463
Query: 393 AIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEE 452
D +E + RL+V++NQ+GC+LGKGGSIIAEMRKLSGA+I +L KD+IP+ E++E
Sbjct: 464 PTSDKKEGPAICRLIVSANQVGCVLGKGGSIIAEMRKLSGAFIIVLSKDKIPRGVPEHDE 523
Query: 453 VVLINGEFEAVQEALFQITTRLRHHFFR-DAFPSINRPLNPTFLDQVSPFPSFIGRRELS 511
VV I+G EA+QEAL QIT RLR+H FR D P++ + P F S F F G E
Sbjct: 524 VVQISGSCEAIQEALMQITARLRNHLFRVDRMPAMGPNMRPPFGLLDSQFGPFAGNHE-- 581
Query: 512 PPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGL 571
PS D +G P D SA PW +G+
Sbjct: 582 --------SPSLFHKDFMG--------RPLDGISA------------------PWTVKGM 607
Query: 572 MEVGGPMGFPDFVGPPHRR-----------------VPVVVPRSLVPIIQGEDGACLKQI 614
++ P+ D G HR V+VPR ++P + EDG CL +I
Sbjct: 608 RDLSDPLSISDIPGAGHREAGGFSGPGQPSMMPNLTAEVLVPRLIIPALCSEDGGCLDRI 667
Query: 615 RQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSET 660
R+ S+AKIT+ +P A + ++ISGTP+Q HAA+SL+QAFVMSE+
Sbjct: 668 REFSEAKITVAEPIADAMDIPVLISGTPDQMHAARSLVQAFVMSES 713
>gi|225443339|ref|XP_002264125.1| PREDICTED: KH domain-containing protein At4g18375 [Vitis vinifera]
gi|297735779|emb|CBI18466.3| unnamed protein product [Vitis vinifera]
Length = 704
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 257/686 (37%), Positives = 368/686 (53%), Gaps = 105/686 (15%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDER--LVVIEASDNKKE 103
++FR+LCP +K GVIGK G ++ Q +DTG IR++++V G DER L+V +A +K+E
Sbjct: 56 VLFRILCPATKTGGVIGKGGAIIRQFREDTGAKIRIDDSVLGCDERVILIVADAVKSKRE 115
Query: 104 TSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLV 163
S A N+G E A++++ S N V +D + E+S Q+AL+ V
Sbjct: 116 ASAICGAE----ANDGEESANLSNSSPNP---------VAVD----DDESSPAQQALVRV 158
Query: 164 FERMVEVEPETEVADQE-NTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI---------- 212
FER+++V+ E E +++ + + RLL S QVGC+LG+GG ++++I
Sbjct: 159 FERILKVDEEREEKEKKEDLGNVAVCCRLLAPSNQVGCVLGRGGKIVEKIRQESGAQIRV 218
Query: 213 ---DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDH-ESIPGNPTG----- 263
D +P CA DE++QITG VRKAL L+S L DN D S PTG
Sbjct: 219 LPKDHIPACASPGDELIQITGTFPAVRKALLLVSSCLQDNPRADATNSAAAKPTGGMLHG 278
Query: 264 -------PSHPLPDHSVSSQGAPY-ATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPE 315
S P + S G Y + G+ +P P +I H VL+ E
Sbjct: 279 NGMPGQLDSFPQRGYGSSLHGPDYHSRGYSS-----MPGPENIGANHRM-VLE------E 326
Query: 316 ILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDR 375
+ F+LLCH E+VG +IGKGG+IIR L+ ETG IK+ +A +++R++VIS + + +
Sbjct: 327 EVVFKLLCHFEKVGSLIGKGGSIIRFLQSETGASIKIADAAPDSDERVVVISARENLEQK 386
Query: 376 ISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYI 435
S QDAV+RV RIA I V+ RLLV S QIGCLLGKGG II+EMR+ +GA I
Sbjct: 387 HSPAQDAVIRVHCRIAE-IGFEPGAAVVARLLVHSQQIGCLLGKGGIIISEMRRATGASI 445
Query: 436 RILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFL 495
RI K+Q+PKC S+N+E+V + G ++VQ+ALF+IT+R+R F PSI+ P ++
Sbjct: 446 RIFAKEQVPKCGSQNDELVQVIGSLQSVQDALFRITSRIRETIF-PLKPSISNVNGPPYM 504
Query: 496 DQVS--PFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHR 553
P P F R + + PG YS+ H D P HP D S+F H + R
Sbjct: 505 SSFPEIPPPMFRPRHDPASPGHYSSPVGVPHGIDRSAVP-----GHPLDHQSSFSHGVDR 559
Query: 554 PG-----------------------MPPHMPDMKPWGPQGLMEVGGPMGFPDFV---GPP 587
G P P M G G + G +G GPP
Sbjct: 560 IGPSNLDRAPYPYGGDRPGHGPPFDRPSSSPRMWTQGVSGNLR-GTDVGSGSLASRNGPP 618
Query: 588 HR----------RVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVII 637
V V VP++L+ + GE+ + L QIRQIS A++ I DP+ G++E V++
Sbjct: 619 GSGSQAPNITTTTVEVAVPQALLSHVYGENNSNLNQIRQISGARVVIQDPRTGSSEGVVV 678
Query: 638 ISGTPEQTHAAQSLIQAFVMSETETT 663
+SGTP+QT AAQSL+QAF++SE TT
Sbjct: 679 VSGTPDQTRAAQSLVQAFILSEQMTT 704
>gi|225464083|ref|XP_002269250.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera]
Length = 648
Score = 331 bits (848), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 237/680 (34%), Positives = 355/680 (52%), Gaps = 116/680 (17%)
Query: 20 PNGKEKSQKLAGDYSENQPSKSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTI 79
PNG K K P G + FR+LC S+I GVIGK G ++ Q+ DTG I
Sbjct: 30 PNGSSKRSK-----PPPPPIPVPAGHVAFRLLCHASRIGGVIGKSGVIVKQLQSDTGARI 84
Query: 80 RVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASVADESDNKKEDSVNE 139
RVE++ S SD R++++ +A S N++
Sbjct: 85 RVEDSPSTSDHRVILV-----------------------------IAPASVNRR------ 109
Query: 140 GSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVG 199
+ + G + E E S Q+A+L VFER++EV + S RLL ++QVG
Sbjct: 110 --IALQGSSEEVEASAAQEAVLRVFERILEVAAVVDGVPPGGVVS----CRLLAETSQVG 163
Query: 200 CLLGKGGCVIKQI-------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQL 246
++GKGG V+++I +KLPTCA ++DE+V+I G+V V+KAL +S +L
Sbjct: 164 SVIGKGGKVVEKIRRESGSKIKVLTAEKLPTCAASTDEMVEIEGDVLAVKKALVAVSRRL 223
Query: 247 LDNSPRDHES-IPGNP--TGPSHPLPDHSVS-------------SQGAPYATGHRDVADI 290
D D I G P P LPD V S YA+G R
Sbjct: 224 QDCPNVDKTKLIGGRPLEVVPQQSLPDPRVDLFQQRGSVLPPIPSNTISYASGSR----- 278
Query: 291 HLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDI 350
P SI S LD PK S + + F++LC ++RVGGVIGKGG I+++L+ E G I
Sbjct: 279 ----PLSINTERIS-TLD-PKTSQQEVIFKILCSNDRVGGVIGKGGTIVKALQNEAGASI 332
Query: 351 KVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTR-----IARAIPDNREQT-VMT 404
V V+ ++RLI I+ +P+ R S Q+ V+ V R I + + + + V
Sbjct: 333 SVGAPVAECDERLITITASENPESRYSPAQNGVILVFNRSIEAGIEKGLDSGSKGSPVSA 392
Query: 405 RLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQ 464
RL+V SNQ+GCL+GKGG+II+EMRK SGA IRI+G DQ+PKCASEN++VV I+GEF VQ
Sbjct: 393 RLVVPSNQVGCLMGKGGTIISEMRKASGAGIRIIGSDQVPKCASENDQVVQISGEFVNVQ 452
Query: 465 EALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSPFPSFIGR-RELSPPGMYSNFG--P 521
+ L+ IT RLR + F + + + ++++SP+ GR R+ + G++S+ G P
Sbjct: 453 DGLYHITGRLRDNLFPSKTLNGAGIRSSSAMNEISPY----GRVRDPASFGLHSSVGVSP 508
Query: 522 SFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPD-----MKPWGPQGLMEVGG 576
SF + + DH H + P P P + P +G +E+G
Sbjct: 509 SFSRHT---------TLTQSMDHLGLSHSLDHPTSPRLWPSQTVTGVNPRNIKGGIELGS 559
Query: 577 PMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVI 636
+ V +V+P +++ + GE+G L ++R+IS AK+T+ +P+PG ++ ++
Sbjct: 560 GSKSAIIT---NTTVEIVIPENVIGSVYGENGNNLARLRKISGAKVTLHEPRPGTSDRIV 616
Query: 637 IISGTPEQTHAAQSLIQAFV 656
IISGTP++T AAQSL+QAF+
Sbjct: 617 IISGTPDETQAAQSLLQAFI 636
>gi|297596401|ref|NP_001042525.2| Os01g0235800 [Oryza sativa Japonica Group]
gi|56783855|dbj|BAD81267.1| HEN4 -like [Oryza sativa Japonica Group]
gi|255673037|dbj|BAF04439.2| Os01g0235800 [Oryza sativa Japonica Group]
Length = 449
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 202/468 (43%), Positives = 273/468 (58%), Gaps = 57/468 (12%)
Query: 213 DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHS 272
DKLP CAL DE+ QITGE+D+VRK L ++ L + P++ + + + +G S S
Sbjct: 14 DKLPLCALPRDELCQITGELDSVRKGLNTVAQLLFTHPPKESDVLGAHNSGSSR-----S 68
Query: 273 VSSQGAPYATGHRDVADIHLPMP----PSIPKFHESGVLDRPKPSPEILTFRLLCHDERV 328
+Q G + ++HLP +P F E+ + PE LTFRLLC ++V
Sbjct: 69 FFNQPDVLPPGMQ--PNLHLPFQGPNVAHLPNFPEALMHGHGSVPPEPLTFRLLCSSDKV 126
Query: 329 GGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQT 388
GG+IGKGG I+S++ +TGC+IKV++ V +EDR++ ISGPAHP D IS Q+A+L VQ
Sbjct: 127 GGIIGKGGNNIKSIQNDTGCEIKVLDTVPKSEDRIVFISGPAHPGDGISPAQNAILHVQR 186
Query: 389 RIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCAS 448
+I + +E + RL+V+ NQ+GCLLGKGGSIIAEMRKLSGA+I +L KD+IPK
Sbjct: 187 KIV-PTSNTKEGPAICRLIVSPNQVGCLLGKGGSIIAEMRKLSGAHIIVLSKDKIPKGVP 245
Query: 449 ENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSPFPSFIGRR 508
EN+EVV I+G EA+QEAL QIT RLR+H FRD S + P F F S+ G
Sbjct: 246 ENDEVVQISGASEAIQEALMQITARLRNHLFRDRMASTVPNVQPPFGLVDPQFGSYAGNH 305
Query: 509 ELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGP 568
+ P ++ N P FHK D +G P D+ SA PW
Sbjct: 306 DSISPRIFPNV-PQFHK-DFIG--------RPLDEMSA------------------PWTM 337
Query: 569 QGLMEVGGPMGFPDFVGPPHR-----------------RVPVVVPRSLVPIIQGEDGACL 611
+G+ VG P+ PD G HR V+VP+ ++P + GEDG CL
Sbjct: 338 KGMQVVGDPISLPDIPGMAHRGMGGFPGPGQPSIVSTITADVMVPKLVLPSLCGEDGGCL 397
Query: 612 KQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
+IR+ S AKIT+ DP A +T I+ISGTP+Q HAA+SLIQAFV+SE
Sbjct: 398 NRIREFSGAKITVADPMGNAMDTAILISGTPDQMHAARSLIQAFVLSE 445
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 115/274 (41%), Gaps = 77/274 (28%)
Query: 43 PGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKK 102
P + FR+LC K+ G+IGK G + I DTG I+V +TV S++R+V I +
Sbjct: 112 PEPLTFRLLCSSDKVGGIIGKGGNNIKSIQNDTGCEIKVLDTVPKSEDRIVFISGPAHPG 171
Query: 103 ETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLL 162
DG+ S Q A+L
Sbjct: 172 ------------------------------------------DGI------SPAQNAILH 183
Query: 163 VFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI---------- 212
V ++V NTK + RL+V QVGCLLGKGG +I ++
Sbjct: 184 VQRKIVPT---------SNTKEGPAICRLIVSPNQVGCLLGKGGSIIAEMRKLSGAHIIV 234
Query: 213 ---DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLP 269
DK+P +DEVVQI+G + +++AL I+ +L ++ RD + T P+ P
Sbjct: 235 LSKDKIPKGVPENDEVVQISGASEAIQEALMQITARLRNHLFRDRMA----STVPNVQPP 290
Query: 270 DHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHE 303
V Q YA H ++ P++P+FH+
Sbjct: 291 FGLVDPQFGSYAGNHDSISPRIF---PNVPQFHK 321
>gi|449438568|ref|XP_004137060.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 658
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 222/668 (33%), Positives = 330/668 (49%), Gaps = 114/668 (17%)
Query: 43 PGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKK 102
PG + FR+LC S+I GVIGK G ++ Q+ Q TGV IRVEE S S +R+V +
Sbjct: 50 PGHVAFRMLCHASRIGGVIGKSGFVIKQLQQSTGVKIRVEEAPSESPDRVVTVIG----- 104
Query: 103 ETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLL 162
S L + + +N+G E E SK Q+ LL
Sbjct: 105 --SPALTSRVFLEQNSGAS--------------------------GEEVEASKAQEGLLK 136
Query: 163 VFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI---------- 212
VFER++EV E E + + RLL QVG ++GKGG V+++I
Sbjct: 137 VFERILEVAAEIEGVEVGAEVGVVY-CRLLADVAQVGSVIGKGGKVVEKIRKESGCRIRV 195
Query: 213 --DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPD 270
DKLP CA SDE+++I G+V ++KAL +S +L D P + ++ LPD
Sbjct: 196 LTDKLPACAGPSDEMIEIEGDVWAIKKALLAVSRRLQDCPPSEKRTVRPAEAVIHETLPD 255
Query: 271 HSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGV----LDRPKPSP-------EILTF 319
+ H + LP+ PS SG+ +D P + + F
Sbjct: 256 LHMD---------HILQRNSVLPILPSSSNIFASGIHSLSIDADMLPPVDTNVAQQDVVF 306
Query: 320 RLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAP 379
++LC ++R+GGVIGKGG I+R+L+ E+G + V +V+G ++RLI I+ + + R S
Sbjct: 307 KILCANDRIGGVIGKGGTIVRALQNESGATVSVGPSVTGCDERLISITASENIESRYSPA 366
Query: 380 QDAVLRVQTR-IARAIPDNREQT-----VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
Q AV+ V +R + AI +E + V+ RL+V SNQ+GC+LGKGG II+E+RK++G
Sbjct: 367 QKAVVLVFSRSVDVAIEKWQESSSKGSPVVARLVVPSNQVGCVLGKGGVIISEIRKVTGT 426
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPT 493
IRI+ DQ+P CA+E++E+V I+GEF VQ+AL+ +T RLR + F N
Sbjct: 427 NIRIISSDQVPNCAAESDEIVQISGEFSNVQDALYNVTGRLRDNLFSSVLS--NSGTRNG 484
Query: 494 FLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPH-----DDHSAFM 548
V P S GR + P + S + H GSF H D
Sbjct: 485 GGTSVYPETSPYGRVRDTAPLVRSTPVGTSH-----------GSFMQHSTAQSSDDLGLS 533
Query: 549 HHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRR------------------ 590
H + P P W PQ L + G P R
Sbjct: 534 HSLDSPSSP------GLWPPQSLSGISSRAISDAGRGLPSHRSGVQLGSGNKTAIVTNTT 587
Query: 591 VPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQS 650
V +VVP ++ ++ GE+G L ++RQIS AK+ + +P P ++ +I+ISGTP++T AAQS
Sbjct: 588 VEIVVPDDVISLVYGENGTNLTRLRQISGAKVIVHEPDPITSDRLIVISGTPDETQAAQS 647
Query: 651 LIQAFVMS 658
L+ AF+++
Sbjct: 648 LLHAFILT 655
>gi|356546743|ref|XP_003541782.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
Length = 663
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 233/712 (32%), Positives = 348/712 (48%), Gaps = 119/712 (16%)
Query: 7 PSKRPHDDDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIMFRVLCPVSKIDGVIGKDGE 66
P+KR D N PNG K + P PG + FR+LC S+I GVIGK G
Sbjct: 9 PAKRSALDPNPFPPNGPSKRSR---QSKPPPPLSVPPGHVAFRLLCNASRIGGVIGKSGS 65
Query: 67 MMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASVA 126
++ + Q TG IR+E+ S +R++++ +A
Sbjct: 66 VIKTLQQSTGAKIRIEDAPQESPDRVILV-----------------------------IA 96
Query: 127 DESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSK 186
D + + K NE V E SK Q+ALL VF+R++EV E E D + S
Sbjct: 97 DAALSCKVLLRNEEVV---------EVSKAQEALLKVFDRILEVAAEMEGVDVGDRVMS- 146
Query: 187 FVLRLLVLSTQVGCLLGKGGCVIKQI------------DKLPTCALASDEVVQITGEVDT 234
RL+ S Q G ++GKGG V+++I D LP CA ASDE+++I G V +
Sbjct: 147 --CRLVADSAQAGSVIGKGGKVVERIKKETGCKIRVLTDDLPLCASASDEMIEIEGRVSS 204
Query: 235 VRKALKLISHQLLDNSPRDHESIPGNP--------TGPSHPLPDHSVSSQGAPYATGHRD 286
V+KAL +S +L D + + GN T + P + + +G H
Sbjct: 205 VKKALVAVSQRLQDCPSVNRIKMMGNKPYEIVQYETLDALPREILTAAPRGTLTVVPHET 264
Query: 287 V----------ADIHLPMPPSIPKFHE-SGVLDR-----PKPSPEILTFRLLCHDERVGG 330
V + + + H S ++R PK + ++FR+LC ++RVGG
Sbjct: 265 VDHLLLRSSALSTLSSSSNSYATRVHSLSAEVNRVSSLEPKALQQEVSFRILCSNDRVGG 324
Query: 331 VIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRI 390
VIGKGG I+R+L+ ETG I + V+ EDRLI I+ +P+ R S Q A + V +R
Sbjct: 325 VIGKGGNIVRALQSETGATISIGPLVAECEDRLITIAASENPESRYSPAQKAAVLVFSRS 384
Query: 391 ARAIPD-------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQI 443
+ N+ TV RL+V S+Q+GCL+GKGG I++E+RK +GA IRI+G DQ+
Sbjct: 385 IEVGFEKELDSGLNKGSTVTVRLVVPSSQVGCLIGKGGVIVSEIRKATGANIRIIGTDQV 444
Query: 444 PKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSI-NRPLNPTFLDQVSPFP 502
PKCAS+N++VV I+GEF +VQ+AL+ T RLR + F S R L+ +D
Sbjct: 445 PKCASDNDQVVQISGEFSSVQDALYNATGRLRDNLFVSTQNSAGTRSLSSLRVDT----- 499
Query: 503 SFIGRRELSPPGMYSNFGPSFHKFDAVGG-PPPPGSFHPHDDH---SAFMHHIHRPGMPP 558
SP G+ +F P + A +F DH S + H PG+
Sbjct: 500 --------SPYGIQQDFVPHGSQLPATTSHCLSRHTFAQGIDHLGLSRNLDHPSSPGLWT 551
Query: 559 HMPDMKPWGPQGLMEVGGPMGFPDFVG------------PPHRRVPVVVPRSLVPIIQGE 606
D+ + + + +G G + V +VVP + + GE
Sbjct: 552 RNLDLAGINSRSINDF--SLGLTSRKGGLELVSGSKSAIVTNTTVEIVVPDDTIDCVYGE 609
Query: 607 DGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMS 658
+G L ++RQIS AK+ I +P+PG ++ +I+ISGTP++T AAQSL+QAF++S
Sbjct: 610 NGRNLVRLRQISGAKVVIHEPRPGTSDRIIVISGTPDETQAAQSLLQAFILS 661
>gi|302814720|ref|XP_002989043.1| hypothetical protein SELMODRAFT_10869 [Selaginella moellendorffii]
gi|300143144|gb|EFJ09837.1| hypothetical protein SELMODRAFT_10869 [Selaginella moellendorffii]
Length = 630
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 217/661 (32%), Positives = 337/661 (50%), Gaps = 80/661 (12%)
Query: 47 MFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSE 106
+FR+LCP S+I VIGK G ++ + Q TG I++ + + GSDER+++I A D + E
Sbjct: 1 LFRILCPASRIGSVIGKGGSIIKTLRQQTGAKIKIADAIPGSDERVIIIGAFDAEGGGDE 60
Query: 107 NLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFER 166
+ A + D+ D ++ N V Q AL V R
Sbjct: 61 DYPAGSGGGA------PAALDKDDRAMDEYTNGRDV----------ACPAQLALFKVHSR 104
Query: 167 MVEVEP-ETEVADQENTK---SSKFVLRLLVLSTQVGCLLGKGGCVIKQI---------- 212
+++ + E ++ D ++ + S K V R+LV QVGCLLGK G +I+Q+
Sbjct: 105 ILDADKYEDDLDDSDSVEEDLSEKVVTRMLVPENQVGCLLGKKGRIIEQMREETGSQIRI 164
Query: 213 ---DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIP----GNPTGPS 265
++LP CAL +DEVVQ+ G+ +V++AL IS +LLDN P+D S GN G S
Sbjct: 165 LPREQLPVCALPTDEVVQVVGDRPSVKRALNAISTRLLDNPPKDRPSSASFQSGNFGGGS 224
Query: 266 HP---------LPDH-SVSSQGAPYATGHRDVADI-HLPMPPSIPKFHESGVLDRPKPSP 314
+P H S++ Q A D D + + P+ P E G P
Sbjct: 225 RSSGFPASEPYIPQHTSLAPQTRLRAEPRSDSGDNGYQLLRPTAPGLSEFGTGRHLVPMD 284
Query: 315 EILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDD 374
E L FR+LC E++G +IGK I++L++ETG I V +AV G E+R+I++S PDD
Sbjct: 285 EELVFRILCPSEKIGNIIGK---FIQTLQEETGAKINVPDAVPGCEERVIIVSAVESPDD 341
Query: 375 RISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAY 434
+S Q+AV +Q ++ R + V+TRLLV SN +GCLLGKGG+II+EMR + A
Sbjct: 342 DLSPAQEAVFHIQDKL-RDDGGETSERVVTRLLVPSNHVGCLLGKGGNIISEMRNSTRAI 400
Query: 435 IRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTF 494
IR+L ++Q+P CA +N+EVV + GE ++AL QIT+RLR + +R+ +R + +
Sbjct: 401 IRVLDREQLPLCALDNDEVVQVLGEIRVARDALVQITSRLRANLYRE---KTDRSDDYGY 457
Query: 495 LDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRP 554
SP +F G + PPG+ + P V PPP SF ++F+ + R
Sbjct: 458 QRSTSPLSNF-GLQASQPPGIQAPRSPPSWLLQQVLIPPP--SFKSR--LTSFLPCLDRK 512
Query: 555 GMPPHMPDMKP--WGPQGLMEVGGPMGFPDFVGPPHR---------------RVPVVVPR 597
W + L G D+ P++ ++ V++P
Sbjct: 513 RSLQWFATAYKLCWNREKLWLGRRSFGLADW---PYQVSHSIQRHLSVVTSTKIDVLIPE 569
Query: 598 SLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVM 657
+ G++G L QI ++S AK+T+ D + +I ISGTP+QT+ A+++++AF
Sbjct: 570 VTFSAVLGQNGDNLTQISKMSGAKVTLADGCTATGDRLIEISGTPDQTNIAKTVVEAFAA 629
Query: 658 S 658
S
Sbjct: 630 S 630
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 88/210 (41%), Gaps = 51/210 (24%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
++FR+LCP KI +IGK + + ++TG I V + V G +ER++++ A ++ +
Sbjct: 287 LVFRILCPSEKIGNIIGK---FIQTLQEETGAKINVPDAVPGCEERVIIVSAVESPDDDL 343
Query: 106 ENLEASIERSENNGREEASVADESDNKK--EDSVNEGSVLMDGLNSEKETSKVQKALLLV 163
+ ++ ++ R++ E + S + G +L G N E +A++ V
Sbjct: 344 SPAQEAVFHIQDKLRDDGGETSERVVTRLLVPSNHVGCLLGKGGNIISEMRNSTRAIIRV 403
Query: 164 FERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKLPTCALASD 223
+R ++LP CAL +D
Sbjct: 404 LDR----------------------------------------------EQLPLCALDND 417
Query: 224 EVVQITGEVDTVRKALKLISHQLLDNSPRD 253
EVVQ+ GE+ R AL I+ +L N R+
Sbjct: 418 EVVQVLGEIRVARDALVQITSRLRANLYRE 447
>gi|449516663|ref|XP_004165366.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 643
Score = 298 bits (762), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 214/647 (33%), Positives = 329/647 (50%), Gaps = 92/647 (14%)
Query: 43 PGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKK 102
PG + FR+LC S+I GVIGK G ++ Q+ Q TGV IRVEE S S +R+V +
Sbjct: 55 PGHVAFRMLCHASRIGGVIGKSGFVIKQLQQSTGVKIRVEEAPSESPDRVVTVIG----- 109
Query: 103 ETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLL 162
S L + + +N+G E E SK Q+ LL
Sbjct: 110 --SPALTSRVFLEQNSGAS--------------------------GEEVEASKAQEGLLK 141
Query: 163 VFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI---------- 212
VFER++EV E E + + RLL QVG ++GKGG V+++I
Sbjct: 142 VFERILEVAAEIEGVEVGAEVGVVYC-RLLADVAQVGSVIGKGGKVVEKIRKESGCRIRV 200
Query: 213 --DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPD 270
DKLP CA SDE+++I G+V ++KAL +S +L D P + ++ LPD
Sbjct: 201 LTDKLPACAGPSDEMIEIEGDVWAIKKALLAVSRRLQDCPPSEKRTVRPAEAVIHETLPD 260
Query: 271 HSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGV----LDRPKPSP-------EILTF 319
+ H + LP+ PS SG+ +D P + + F
Sbjct: 261 LHMD---------HILQRNSVLPILPSSSNIFASGIHSLSIDADMLPPVDTNVAQQDVVF 311
Query: 320 RLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAP 379
++LC ++R+GGVIGKGG I+R+L+ E+G + V +V+G ++RLI I+ + + R S
Sbjct: 312 KILCANDRIGGVIGKGGTIVRALQNESGATVSVGPSVTGCDERLISITASENIESRYSPA 371
Query: 380 QDAVLRVQTR-IARAIPDNREQT-----VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
Q AV+ V +R + AI +E + V+ RL+V SNQ+GC+LGKGG II+E+RK++G
Sbjct: 372 QKAVVLVFSRSVDVAIEKWQESSSKGSPVVARLVVPSNQVGCVLGKGGVIISEIRKVTGT 431
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPT 493
IRI+ DQ+P CA+E++E+V I+GEF VQ+AL+ +T RLR + F + R +
Sbjct: 432 NIRIISSDQVPNCAAESDEIVQISGEFSNVQDALYNVTGRLRDNLFLVPY---GRVRDTA 488
Query: 494 FLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHR 553
L + +P + G S+ H D+ P PG + P I
Sbjct: 489 PLVRSTPVGTSHGSFMQHSTAQSSDDLGLSHSLDS---PSSPGLWPPQSLSGISSRAISD 545
Query: 554 P--GMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACL 611
G+P H ++ + G + V +VVP ++ ++ GE+G L
Sbjct: 546 AGRGLPSHRSGVQ-------LGSGNKTAIVT-----NTTVEIVVPDDVISLVYGENGTNL 593
Query: 612 KQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMS 658
++RQIS AK+ + +P P + +I+ISGTP++T AAQSL+ AF+++
Sbjct: 594 TRLRQISGAKVIVHEPDPITNDRLIVISGTPDETQAAQSLLHAFILT 640
>gi|356557593|ref|XP_003547100.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 710
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 240/760 (31%), Positives = 365/760 (48%), Gaps = 168/760 (22%)
Query: 7 PSKRPHDDDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIMFRVLCPVSKIDGVIGKDGE 66
P+KR D PNG K + + P PG + FR+LC S+I GVIGK G
Sbjct: 9 PAKRSAPDPYPFHPNGPSKRSRQS---KPPPPLSVPPGHVAFRLLCNASRIGGVIGKSGS 65
Query: 67 MMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASVA 126
++ + Q TG IR+E+ +R++++ A
Sbjct: 66 VIKTLQQSTGAKIRIEDAPQELPDRIILVIA----------------------------- 96
Query: 127 DESDNKKEDSVNEGSVLMDGLNSEK-ETSKVQKALLLVFERMVEV---EPETEVADQENT 182
D+ G +L+ N E E SK Q+ALL VF+R++ + +V D+
Sbjct: 97 --------DAALSGKILLR--NEEVIEVSKAQEALLKVFDRILRSGGGDRSVDVGDR--- 143
Query: 183 KSSKFVLRLLVLSTQVGCLLGKGGCVIKQI------------DKLPTCALASDEVVQITG 230
RL+ + Q G ++GKGG V+++I D LP CA ASDE+++I G
Sbjct: 144 ---VMSCRLVADAAQAGSVIGKGGKVVERIKKETGCKIRVLTDDLPLCASASDEIIEIEG 200
Query: 231 EVDTVRKALKLISHQLLDNSPRD--------------HESIPGNPTGPSHPLPDHSVSS- 275
V +V+KAL +S +L D P D +E++ P S P ++++
Sbjct: 201 RVSSVKKALVAVSQRLQDCHPVDRTKMMGSKPYEIVQYEALDALPRATSTAAPRVTLTAA 260
Query: 276 -QGAPYATGHRDV---------------------ADIHLPMPPSIPKFHESGVLDRPKPS 313
+G A H V IH +P + + PK
Sbjct: 261 PRGTLTAVQHETVDHLLLRSSALSTLSSSSNSYATRIH-SLPTEVNRVSSL----EPKAL 315
Query: 314 PEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPD 373
+ +TFR+LC ++RVGGVIGKGG I+R+L+ ETG I + AV+ EDRLI I+ +P+
Sbjct: 316 KQEVTFRILCSNDRVGGVIGKGGNIVRALQSETGATISIGPAVAECEDRLITIAASENPE 375
Query: 374 DRISAPQDAVLRVQTR-----IARAIPD--NREQTVMTRLLVASNQIGCLLGKGGSIIAE 426
R S Q A + V +R + + N+ V RL+V S+Q+GCL+GKGG I++E
Sbjct: 376 SRYSPAQKAAVLVFSRSIEVGFEKGLDSGLNKGSIVTVRLVVPSSQVGCLIGKGGVIVSE 435
Query: 427 MRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSI 486
MRK +GA IRI+G DQ+PKCAS+N++VV I+GEF +VQ+AL+ RLR + F S
Sbjct: 436 MRKATGANIRIIGTDQVPKCASDNDQVVQISGEFSSVQDALYNAMGRLRDNLFVSTQNSA 495
Query: 487 -NRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGP------SFHKF----DAVG----- 530
R L+ +D SP+ GR++ P + S P S H F D +G
Sbjct: 496 GTRSLSSLRVD-TSPY----GRQQDVVP-LGSQLPPATSHSLSRHTFAQGIDHLGLSRNL 549
Query: 531 -GPPPPGSFHPHDDHSA----FMHHIHR---PGMPPHMPDMKP-----WGPQGLMEVGGP 577
P PG + + D + + ++ R PG+ D +P W P + +
Sbjct: 550 DHPSSPGLWTRNLDRPSSPGLWTRNLDRPSSPGLWTRNLDHRPSSPGLWAPPTVAGINS- 608
Query: 578 MGFPDF-VGPPHRR------------------VPVVVPRSLVPIIQGEDGACLKQIRQIS 618
G DF +G R+ V +VVP + + GE+G+ L ++RQIS
Sbjct: 609 RGINDFSLGLTSRKGGLELVSGSKSAIVTNTIVEIVVPDDTIDCVYGENGSNLARLRQIS 668
Query: 619 DAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMS 658
A + + +P+PG ++ +I+ISGTP++T AAQSL+QAF++S
Sbjct: 669 GANVVVHEPRPGTSDRIIVISGTPDETQAAQSLLQAFILS 708
>gi|302803919|ref|XP_002983712.1| hypothetical protein SELMODRAFT_445677 [Selaginella moellendorffii]
gi|300148549|gb|EFJ15208.1| hypothetical protein SELMODRAFT_445677 [Selaginella moellendorffii]
Length = 668
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 215/649 (33%), Positives = 330/649 (50%), Gaps = 85/649 (13%)
Query: 48 FRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSEN 107
FR+LCP S+I VIGK G ++ + Q TG I++ + + GSDER+++I A D + E+
Sbjct: 62 FRILCPASRIGSVIGKGGSIIKTLRQQTGAKIKIADAIPGSDERVIIIGAFDAEGGGDED 121
Query: 108 LEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERM 167
A A+ D+ D ++ N V Q AL V R+
Sbjct: 122 YPAGSGGGS------AAALDKDDRAMDEYTNGRDV----------ACPAQLALFKVHSRI 165
Query: 168 VEVEP-ETEVADQENTK---SSKFVLRLLVLSTQVGCLLGKGGCVIKQI----------- 212
++ + E ++ D ++ + S K V R+LV QVGCLLGK G +I+Q+
Sbjct: 166 LDADKYEDDLDDSDSVEEDLSEKVVTRMLVPENQVGCLLGKKGRIIEQMREETGSQIRIL 225
Query: 213 --DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIP----GNPTGPSH 266
++LP CAL +DEVVQ+ G+ +V++AL IS +LLDN P+D S GN G S
Sbjct: 226 PREQLPVCALPTDEVVQVVGDRPSVKRALNAISTRLLDNPPKDRPSSASFQSGNFGGGSR 285
Query: 267 P---------LPDH-SVSSQGAPYATGHRDVADI-HLPMPPSIPKFHESGVLDRPKPSPE 315
+P H S++ Q A D D + + P+ P E G P E
Sbjct: 286 SSGFPASEPYIPQHTSLAPQTRLRAEPRSDSGDNGYQLLRPTAPGLSEFGTGRHLVPMDE 345
Query: 316 ILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDR 375
L FR+LC E++G +IGK I++L++ETG I V +AV G E+R+I++S PDD
Sbjct: 346 ELVFRILCPSEKIGNIIGK---FIQTLQEETGAKINVPDAVPGCEERVIIVSAVESPDDD 402
Query: 376 ISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYI 435
+S Q+AV +Q ++ R + V+TRLLV SN +GCLLGKGG+II+EMR + A I
Sbjct: 403 LSPAQEAVFHIQDKL-RDDGGETSERVVTRLLVPSNHVGCLLGKGGNIISEMRNSTRAII 461
Query: 436 RILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFL 495
R+L ++Q+P CA +N+EVV + GE ++AL QIT+RLR + +R+ +R + +
Sbjct: 462 RVLDREQLPLCALDNDEVVQVLGEIRVARDALVQITSRLRANLYRE---KTDRSDDYGYQ 518
Query: 496 DQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPG 555
SP SNFG + PPG P S + R G
Sbjct: 519 RSTSPL---------------SNFGLQASQ--------PPGIQAPRSPPSWLLQQTER-G 554
Query: 556 MPPHMPDMKPW-GPQGLMEVGG-----PMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGA 609
+P + + G + + G P G + ++ V++P + G++G
Sbjct: 555 AYNGLPRLTSYAGIERSYGLAGDRSALPTGLTNLSVVTSTKIDVLIPEVTFSAVLGQNGD 614
Query: 610 CLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMS 658
L QI ++S AK+T+ D + +I ISGTP+QT+ A+++++AF S
Sbjct: 615 NLTQISKMSGAKVTLADGCTATGDRLIEISGTPDQTNIAKTVVEAFAAS 663
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 97/221 (43%), Gaps = 73/221 (33%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
++FR+LCP KI +IGK + + ++TG I V + V G +ER++++ A ++
Sbjct: 347 LVFRILCPSEKIGNIIGK---FIQTLQEETGAKINVPDAVPGCEERVIIVSAVESP---- 399
Query: 106 ENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFE 165
+ + S Q+A+ + +
Sbjct: 400 --------------------------------------------DDDLSPAQEAVFHIQD 415
Query: 166 RMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI------------- 212
++ + ET S + V RLLV S VGCLLGKGG +I ++
Sbjct: 416 KLRDDGGET---------SERVVTRLLVPSNHVGCLLGKGGNIISEMRNSTRAIIRVLDR 466
Query: 213 DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRD 253
++LP CAL +DEVVQ+ GE+ R AL I+ +L N R+
Sbjct: 467 EQLPLCALDNDEVVQVLGEIRVARDALVQITSRLRANLYRE 507
>gi|255563372|ref|XP_002522689.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223538165|gb|EEF39776.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 698
Score = 281 bits (719), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 217/762 (28%), Positives = 351/762 (46%), Gaps = 186/762 (24%)
Query: 7 PSKRPHDDDNHTEPNGKEKSQKLAGDYSENQPSKSF--------PGGIMFRVLCPVSKID 58
PSKRP + P+ + L+ + P+ PG + FR+LC S+I
Sbjct: 9 PSKRPIQYNAAGMPDPNPTANGLSNKRPKQPPANQNAAAPLPLPPGHVSFRLLCHASRIG 68
Query: 59 GVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENN 118
G+IGK G ++ Q+ Q +G IR+EE+ + S +R++ + A
Sbjct: 69 GIIGKSGTIIKQLQQQSGAKIRIEESPAESSDRVITVIA--------------------E 108
Query: 119 GREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVAD 178
G+ + V ES+ E + S+ Q+ L+ VFER++EV E++ +
Sbjct: 109 GQIVSKVRVESE-------------------EVDVSRAQEGLIRVFERILEVAAESDGIN 149
Query: 179 QENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI------------DKLPTCALASDEVV 226
R+L S Q G ++GKGG V+++I DKLP CA ++E++
Sbjct: 150 VVAGGGGVVSCRMLAGSKQAGSVIGKGGKVVEKIRKDCGVKIRVLTDKLPVCAGPNEEMI 209
Query: 227 QITGEVDTVRKALKLISHQLLDNSPRDHESIPGNP---TGPSHPLPDHSVSSQGAPYATG 283
+I G++ +V+KAL +S L D P D + + P PLP+ V + AP
Sbjct: 210 EIEGDILSVKKALIAVSRCLQDCQPVDKPRVGSSKYFEAVPQEPLPEMRV--EIAP---- 263
Query: 284 HRDVADIHLPMPPSIPKFHESGVLDRPKPSPEIL-----------------TFRLLCHDE 326
R++ +P + V P P +L F++LC ++
Sbjct: 264 QRNIM---------VPTMQNNAVSCAPVPHNFLLETDRVPSLDMKLFQQEVVFKILCPND 314
Query: 327 RVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRV 386
VGGVIGKGG II++L+ ETG I + ++ +++RLI + +P+ R SA Q AV+
Sbjct: 315 MVGGVIGKGGTIIKALQNETGASITIGATIAESDERLITVIASENPESRYSAAQKAVV-- 372
Query: 387 QTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKC 446
V +RL+V SNQ+GCLLGKGG II++MRK +G I+IL DQ+PKC
Sbjct: 373 --------------LVFSRLVVPSNQVGCLLGKGGIIISDMRKTTGTSIKILAGDQLPKC 418
Query: 447 ASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPS-----------------INRP 489
ENE+VV I+G+F V++A++ +T RLR + F A + + P
Sbjct: 419 VPENEQVVQISGDFMNVKDAVYHVTGRLRDNLFSSALSTPVTRSTTVITEASPYGRLKEP 478
Query: 490 LNPTFLDQVSPFPSFIG--------------RRELSPPGMYSNFGPSFHK--FDAVGGP- 532
L F + ++ F +G R+ + +FG + D + P
Sbjct: 479 LRDAFKEPLNTFREPLGDAFRDPLRAAMRGPLRDARRDPLRDSFGDTLRDQLRDTLKEPP 538
Query: 533 --PPPGSFHP----------HD------DHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEV 574
P P + HP H+ DH H + P P + W Q + +
Sbjct: 539 RGPAPYNLHPPIGVSHSLNRHNTLTQSMDHLGLSHSLDGPISP------RLWASQTMAGI 592
Query: 575 G------GPMGFPDFVGP------------PHRRVPVVVPRSLVPIIQGEDGACLKQIRQ 616
GF F G + V + VP +++ + GE+ + L ++RQ
Sbjct: 593 NPRVVPDASRGFTSFKGGLELGSGSKSAIVTNTTVEIRVPENVIGSVYGENDSNLTRLRQ 652
Query: 617 ISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMS 658
IS AK+ + +P+ G+++ +I+ISGTP++T AAQSL+QAF+++
Sbjct: 653 ISGAKVIVHEPRLGSSDRIIVISGTPDETQAAQSLLQAFILT 694
>gi|15217969|ref|NP_175569.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|12321677|gb|AAG50879.1|AC025294_17 hypothetical protein [Arabidopsis thaliana]
gi|12325367|gb|AAG52626.1|AC024261_13 hypothetical protein; 15135-12645 [Arabidopsis thaliana]
gi|31711718|gb|AAP68215.1| At1g51580 [Arabidopsis thaliana]
gi|110735740|dbj|BAE99849.1| hypothetical protein [Arabidopsis thaliana]
gi|332194564|gb|AEE32685.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 621
Score = 269 bits (687), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 214/652 (32%), Positives = 323/652 (49%), Gaps = 93/652 (14%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVS-GSDERLVVIEASDNKKET 104
+ FR+LCP ++ +IGK G ++ + TG IRV + + S+ER+V+I A KK+
Sbjct: 19 VHFRLLCPATRTGAIIGKGGSVIRHLQSVTGSKIRVIDDIPVPSEERVVLIIAPSGKKKD 78
Query: 105 SENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVF 164
E+++ SEN G EE +++ S G+ G + E+ S Q ALL VF
Sbjct: 79 ----ESNVCDSENPGSEEP-------KQEKGSECAGT---SGGDDEEAPSSAQMALLRVF 124
Query: 165 ERMVEVEPETEV-ADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI----------- 212
ER+V + V D+ + S+ + R++V QV L+ KGG +I++I
Sbjct: 125 ERIVFGDDAATVDGDELDKGESEGLCRMIVRGNQVDYLMSKGGKMIQKIREDSGAIVRIS 184
Query: 213 --DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDN-SPRDHESIPGNPTGPSHPLP 269
D++P CA D V+Q+ G+ +V+KAL L+++ L ++ +P + P P +P
Sbjct: 185 STDQIPPCAFPGDVVIQMNGKFSSVKKALLLVTNCLQESGAPPTWDECPF--PQPGYPPE 242
Query: 270 DHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVG 329
HS+ PP P + G +RP E+ FRLLC ++VG
Sbjct: 243 YHSMEYHP-------------QWDHPPPNPMPEDVGPFNRPVVEEEV-AFRLLCPADKVG 288
Query: 330 GVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTR 389
+IGKGGA++R+L+ E+G IKV + +E+R+IVIS + + R S QD V+RV R
Sbjct: 289 SLIGKGGAVVRALQNESGASIKVSDPTHDSEERIIVISARENLERRHSLAQDGVMRVHNR 348
Query: 390 IARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASE 449
I I V+ RLLV S IG LLGKGG +I+EMR+ +GA IR+ KDQ K S+
Sbjct: 349 IVE-IGFEPSAAVVARLLVHSPYIGRLLGKGGHLISEMRRATGASIRVFAKDQATKYESQ 407
Query: 450 NEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSI----------------------- 486
++E+V + G + VQ+ALFQI RLR F P
Sbjct: 408 HDEIVQVIGNLKTVQDALFQILCRLREAMFPGRLPFQGMGGPPPPFMGPYPEPPPPFGPR 467
Query: 487 NRPLNP-TFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHS 545
P +P + V PF R PG GP F + PP P S+ P
Sbjct: 468 QYPASPDRYHSPVGPF----HERHCHGPGFDRPPGPGFDR------PPSPMSWTPQPGID 517
Query: 546 AFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQG 605
H GM P PD+ G P+G + V V +V+P++ + + G
Sbjct: 518 G-----HPGGMVP--PDVN----HGFALRNEPIGSENPVM-TSANVEIVIPQAYLGHVYG 565
Query: 606 EDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVM 657
E+ + L I+Q+S A + + DPK G TE ++++SGT +Q H AQSL+ AF++
Sbjct: 566 ENCSNLNYIKQVSGANVVVHDPKAGTTEGLVVVSGTSDQAHFAQSLLHAFIL 617
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 107/394 (27%), Positives = 166/394 (42%), Gaps = 118/394 (29%)
Query: 315 EILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHP- 372
E + FRLLC R G +IGKGG++IR L+ TG I+V++ + +E+R+++I P+
Sbjct: 17 ESVHFRLLCPATRTGAIIGKGGSVIRHLQSVTGSKIRVIDDIPVPSEERVVLIIAPSGKK 76
Query: 373 ---------------------------------DDRISAPQDAVLRVQTRI-----ARAI 394
++ S+ Q A+LRV RI A +
Sbjct: 77 KDESNVCDSENPGSEEPKQEKGSECAGTSGGDDEEAPSSAQMALLRVFERIVFGDDAATV 136
Query: 395 P----DNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASEN 450
D E + R++V NQ+ L+ KGG +I ++R+ SGA +RI DQIP CA
Sbjct: 137 DGDELDKGESEGLCRMIVRGNQVDYLMSKGGKMIQKIREDSGAIVRISSTDQIPPCAFPG 196
Query: 451 EEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSPFPSFIGRREL 510
+ V+ +NG+F +V++AL +T L+ P D+ PFP
Sbjct: 197 DVVIQMNGKFSSVKKALLLVTNCLQESG------------APPTWDEC-PFPQ------- 236
Query: 511 SPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQG 570
PG + P +H + +HP DH PP P
Sbjct: 237 --PG----YPPEYHSME----------YHPQWDH------------PPPNP--------- 259
Query: 571 LMEVGGPMGFPDFVGPPHRRV-------PVVVPRSLVPIIQGEDGACLKQIRQISDAKIT 623
P+ VGP +R V ++ P V + G+ GA ++ ++ S A I
Sbjct: 260 ---------MPEDVGPFNRPVVEEEVAFRLLCPADKVGSLIGKGGAVVRALQNESGASIK 310
Query: 624 ITDPKPGATETVIIISGTPEQTHAAQSLIQAFVM 657
++DP + E +I+IS E SL Q VM
Sbjct: 311 VSDPTHDSEERIIVISAR-ENLERRHSLAQDGVM 343
>gi|168013158|ref|XP_001759268.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689581|gb|EDQ75952.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 427
Score = 269 bits (687), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 168/465 (36%), Positives = 261/465 (56%), Gaps = 70/465 (15%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
++FR+LCP KI VIGK G ++ + Q++G I++ + + G DER+++I ++D
Sbjct: 3 VVFRILCPAPKIGSVIGKGGSIIKTLRQESGAKIKIADAIPGVDERVILISSTD------ 56
Query: 106 ENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFE 165
R + GR + DG NSE E + Q+AL V
Sbjct: 57 --------RGNDRGRGK----------------------DG-NSE-ELTPAQEALFKVHA 84
Query: 166 RMV-EVEPE-TEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI----------- 212
R++ +VE + +DQE S + V RLLV + Q+GCLLGKGG +I+Q+
Sbjct: 85 RIIADVETSGIDGSDQEEEPSQQVVTRLLVPNNQIGCLLGKGGKIIEQMRQTTGAQIRVL 144
Query: 213 --DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPD 270
D+LP CAL +DE+VQ++G+V T++KAL IS +L +N PRD P P+ D
Sbjct: 145 PKDQLPGCALPTDELVQVSGDVSTLKKALLFISARLQENPPRDRPQSYAAPAPAFVPVTD 204
Query: 271 HSVSSQGAPYATGH-------------RDVADIHLPMPPSIPKFHESGVLDRPKPSPEIL 317
+ TGH ++ +L + + + G R E L
Sbjct: 205 YLAKDSYRSKGTGHVFGLGPEPLEGRSWTISSGNLSLDRQDNRRSKEG---RDSGENE-L 260
Query: 318 TFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRIS 377
FRLLC +++G VIGKGG+II +L+++TG IK+ AV G+++R+I++S P D S
Sbjct: 261 VFRLLCPSDKIGSVIGKGGSIIHNLRKDTGARIKIANAVPGSDERVIIVSALELPGDSFS 320
Query: 378 APQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRI 437
+A+++VQ+RI + +++ + TRLLV +NQIGCLLGKGGSII +MR+ + A IR+
Sbjct: 321 PALEAMIQVQSRITAEMGGDKDGIITTRLLVPTNQIGCLLGKGGSIIEDMRRATRANIRV 380
Query: 438 LGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDA 482
L KD +P+CA + +E+V I G+ +EALFQ+ +RLR++ FR++
Sbjct: 381 LPKDTLPRCALDTDELVQIVGDTTVAREALFQVISRLRNNAFRES 425
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 108/368 (29%), Positives = 181/368 (49%), Gaps = 57/368 (15%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDR- 375
+ FR+LC ++G VIGKGG+II++L+QE+G IK+ +A+ G ++R+I+IS +DR
Sbjct: 3 VVFRILCPAPKIGSVIGKGGSIIKTLRQESGAKIKIADAIPGVDERVILISSTDRGNDRG 62
Query: 376 ---------ISAPQDAVLRVQTRIARAI-------PDNRE---QTVMTRLLVASNQIGCL 416
++ Q+A+ +V RI + D E Q V+TRLLV +NQIGCL
Sbjct: 63 RGKDGNSEELTPAQEALFKVHARIIADVETSGIDGSDQEEEPSQQVVTRLLVPNNQIGCL 122
Query: 417 LGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRH 476
LGKGG II +MR+ +GA IR+L KDQ+P CA +E+V ++G+ +++AL I+ RL+
Sbjct: 123 LGKGGKIIEQMRQTTGAQIRVLPKDQLPGCALPTDELVQVSGDVSTLKKALLFISARLQE 182
Query: 477 HFFRDAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPG 536
+ RD S P P F+ P ++ + G FG +G P G
Sbjct: 183 NPPRDRPQSYAAP-APAFV----PVTDYLAKDSYRSKGTGHVFG--------LGPEPLEG 229
Query: 537 -SFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVV 595
S+ + + +R + + G L+ ++
Sbjct: 230 RSWTISSGNLSLDRQDNR-----RSKEGRDSGENELV------------------FRLLC 266
Query: 596 PRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAF 655
P + + G+ G+ + +R+ + A+I I + PG+ E VII+S + ++A
Sbjct: 267 PSDKIGSVIGKGGSIIHNLRKDTGARIKIANAVPGSDERVIIVSALELPGDSFSPALEAM 326
Query: 656 VMSETETT 663
+ ++ T
Sbjct: 327 IQVQSRIT 334
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 56/106 (52%), Gaps = 14/106 (13%)
Query: 164 FERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI----------- 212
E M++V+ A+ K RLLV + Q+GCLLGKGG +I+ +
Sbjct: 323 LEAMIQVQSRI-TAEMGGDKDGIITTRLLVPTNQIGCLLGKGGSIIEDMRRATRANIRVL 381
Query: 213 --DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHES 256
D LP CAL +DE+VQI G+ R+AL + +L +N+ R+ S
Sbjct: 382 PKDTLPRCALDTDELVQIVGDTTVAREALFQVISRLRNNAFRESGS 427
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%), Gaps = 4/76 (5%)
Query: 26 SQKLAGDYSENQPSK----SFPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRV 81
S L+ D +N+ SK S ++FR+LCP KI VIGK G ++ + +DTG I++
Sbjct: 236 SGNLSLDRQDNRRSKEGRDSGENELVFRLLCPSDKIGSVIGKGGSIIHNLRKDTGARIKI 295
Query: 82 EETVSGSDERLVVIEA 97
V GSDER++++ A
Sbjct: 296 ANAVPGSDERVIIVSA 311
Score = 42.7 bits (99), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 141/338 (41%), Gaps = 68/338 (20%)
Query: 31 GDYSENQPSKSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRV--EETVSG- 87
G E +PS+ ++ R+L P ++I ++GK G+++ Q+ Q TG IRV ++ + G
Sbjct: 97 GSDQEEEPSQQ----VVTRLLVPNNQIGCLLGKGGKIIEQMRQTTGAQIRVLPKDQLPGC 152
Query: 88 ---SDERLVVIEASDNKKETSENLEASIERSENNGREEASVADE------SDNKKEDSV- 137
+DE + V K+ + A ++ + R ++ A +D +DS
Sbjct: 153 ALPTDELVQVSGDVSTLKKALLFISARLQENPPRDRPQSYAAPAPAFVPVTDYLAKDSYR 212
Query: 138 NEGSVLMDGLNSE--KETSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLS 195
++G+ + GL E + S + L +R + + ++ ++ V RLL S
Sbjct: 213 SKGTGHVFGLGPEPLEGRSWTISSGNLSLDR----QDNRRSKEGRDSGENELVFRLLCPS 268
Query: 196 TQVGCLLGKGGCVIKQIDKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHE 255
++G ++GKGG +I + K + V + E + AL+L
Sbjct: 269 DKIGSVIGKGGSIIHNLRKDTGARIKIANAVPGSDERVIIVSALEL-------------- 314
Query: 256 SIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPE 315
PG+ P+ V S+ G +D
Sbjct: 315 --PGDSFSPALEAMIQ-VQSRITAEMGGDKD----------------------------G 343
Query: 316 ILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVM 353
I+T RLL ++G ++GKGG+II +++ T +I+V+
Sbjct: 344 IITTRLLVPTNQIGCLLGKGGSIIEDMRRATRANIRVL 381
>gi|147863214|emb|CAN78372.1| hypothetical protein VITISV_006585 [Vitis vinifera]
Length = 807
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 223/676 (32%), Positives = 326/676 (48%), Gaps = 110/676 (16%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
+ R+L P +++ V+G+ G+++ +I Q++G IR V D D
Sbjct: 183 VCCRLLAPSNQVGCVLGRGGKIVEKIRQESGAQIR----VLPKDHIPACASPGD------ 232
Query: 106 ENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFE 165
E ++ S++R GR S +E G VL K+ +V+ L +
Sbjct: 233 ELIQGSMKRKGGVGRVVGGCCCCSRALRE---GYGVVLW------KKLGEVETLLRRLQG 283
Query: 166 RMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKLPTCALASDEV 225
++++ E + + + S V L+++ + PT + +
Sbjct: 284 QVIKGGAEDIMGSRLSKGCSFAVKSFYSLASRF-------------LKGFPTSIMWNPWG 330
Query: 226 VQITGEVDTVRKALKLISHQLLDNSPRDH-ESIPGNPTG------------PSHPLPDHS 272
ITG VRKAL L+S L DN D S PTG S P +
Sbjct: 331 PNITGTFPAVRKALLLVSSCLQDNPRADATNSAAAKPTGGMLHGNGMPGQLDSFPQRGYG 390
Query: 273 VSSQGAPY-ATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGV 331
S G Y + G+ +P P +I H VL+ E + F+LLCH E+VG +
Sbjct: 391 SSLHGPDYHSRGYSS-----MPGPENIGANHRM-VLE------EEVVFKLLCHFEKVGSL 438
Query: 332 IGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGP-----AHPDDRISAPQDAVLRV 386
IGKGG+IIR L+ ETG IK+ +A +++R++VIS + + + S QDAV+RV
Sbjct: 439 IGKGGSIIRXLQSETGASIKIADAAPDSDERVVVISAREACTLTNXEQKHSPAQDAVIRV 498
Query: 387 QTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKC 446
RIA I V+ RLLV S QIGCLLGKGG II+EMR+ +GA IRI K+Q+PKC
Sbjct: 499 HCRIAE-IGFEPGAAVVARLLVHSQQIGCLLGKGGIIISEMRRATGASIRIFAKEQVPKC 557
Query: 447 ASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVS--PFPSF 504
S+N+E+V + G ++VQ+ALF IT+R+R F PSI+ P ++ P P F
Sbjct: 558 GSQNDELVQVIGSLQSVQDALFCITSRIRETIF-PLKPSISNVNGPPYMSSFPEIPPPMF 616
Query: 505 IGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPG--------- 555
R + + PG YS+ H D P HP D S+F H + R G
Sbjct: 617 RPRHDPASPGHYSSPVGVPHGIDRSAVP-----GHPLDHQSSFSHGVDRIGPSNLDRAPY 671
Query: 556 -----MPPHMPDM-------KPWGPQGL------MEVGGPMGFPDFVGPP---------- 587
P H P + W PQG+ +VG G GPP
Sbjct: 672 PYGGDRPGHGPPFDRPSSSPRMWTPQGVSGNLRGTDVGS-GGLASRSGPPGSGSQAPNIT 730
Query: 588 HRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHA 647
V V VP++L+ + GE+ + L QIRQIS A++ I DP+ G++E V+++SGTP+QT A
Sbjct: 731 XTTVEVAVPQALLSHVYGENNSNLNQIRQISGARVVIQDPRTGSSEGVVVVSGTPDQTRA 790
Query: 648 AQSLIQAFVMSETETT 663
AQSL+QAF++SE TT
Sbjct: 791 AQSLVQAFILSEQMTT 806
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 111/198 (56%), Gaps = 33/198 (16%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDER--LVVIEASDNKKE 103
++FR+LCP +K GVIGK G ++ Q +DTG IR++++V G DER L+V +A +K+E
Sbjct: 56 VLFRILCPATKTGGVIGKGGAIIRQFREDTGAKIRIDDSVLGCDERVILIVADAVKSKRE 115
Query: 104 TSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLV 163
S A N+G E A++++ S N V +D + E+S Q+AL+ V
Sbjct: 116 ASAICGA----EANDGEESANLSNSSPNP---------VAVD----DDESSPAQQALVRV 158
Query: 164 FERMVEVE-PETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI---------- 212
FER+++V+ E +E+ + RLL S QVGC+LG+GG ++++I
Sbjct: 159 FERILKVDEEREEKEKKEDLGNVAVCCRLLAPSNQVGCVLGRGGKIVEKIRQESGAQIRV 218
Query: 213 ---DKLPTCALASDEVVQ 227
D +P CA DE++Q
Sbjct: 219 LPKDHIPACASPGDELIQ 236
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 97/183 (53%), Gaps = 43/183 (23%)
Query: 314 PEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVI------- 366
P++L FR+LC + GGVIGKGGAIIR +++TG I++ ++V G ++R+I+I
Sbjct: 54 PQVL-FRILCPATKTGGVIGKGGAIIRQFREDTGAKIRIDDSVLGCDERVILIVADAVKS 112
Query: 367 -----------------------SGP---AHPDDRISAPQDAVLRVQTRIARA------- 393
S P A DD S Q A++RV RI +
Sbjct: 113 KREASAICGAEANDGEESANLSNSSPNPVAVDDDESSPAQQALVRVFERILKVDEEREEK 172
Query: 394 --IPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENE 451
D V RLL SNQ+GC+LG+GG I+ ++R+ SGA IR+L KD IP CAS +
Sbjct: 173 EKKEDLGNVAVCCRLLAPSNQVGCVLGRGGKIVEKIRQESGAQIRVLPKDHIPACASPGD 232
Query: 452 EVV 454
E++
Sbjct: 233 ELI 235
>gi|297847528|ref|XP_002891645.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297337487|gb|EFH67904.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 622
Score = 258 bits (660), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 217/653 (33%), Positives = 321/653 (49%), Gaps = 94/653 (14%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETV-SGSDERLVVIEASDNKKET 104
+ FR+LCP ++ +IGK G ++ + TG IRV + + S+ER+V+I A KK+
Sbjct: 19 VHFRLLCPAARTGAIIGKGGSVIRHLQSVTGSKIRVIDDIPVPSEERVVLIIAPSGKKKD 78
Query: 105 SENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVF 164
N + SEN EE +++ S G+ G + E+ S Q ALL V
Sbjct: 79 DSN----VFDSENPSSEEP-------KQEKGSECAGT---SGGDDEEAPSSAQMALLRVL 124
Query: 165 ERMVEVEPETEV-ADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI----------- 212
ER+V + V D + S+ + R++V QV L+ KGG +I++I
Sbjct: 125 ERIVFGDDAASVDGDGLDKGESESLCRMIVRGNQVDFLMSKGGKMIQRIREDSGAIVRIS 184
Query: 213 --DKLPTCALASDEVVQ--ITGEVDTVRKALKLISHQLLDN-SPRDHESIPGNPTGPSHP 267
D++P CA D V+Q ITG+ +V+KAL LI++ L ++ +P + P P +P
Sbjct: 185 STDQIPPCAFPGDVVIQMKITGKFSSVKKALLLITNCLQESGAPPTWDECPF--PQPGYP 242
Query: 268 LPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDER 327
HS+ H PMP + F +RP E+ +FRLLC ++
Sbjct: 243 PDYHSMEY--------HPQWDHPPNPMPEDVVPF------NRPVVEEEV-SFRLLCPADK 287
Query: 328 VGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQ 387
VG +IGKGGA++R+L+ E+G IKV + +E+R+IVIS + + R S QD V+RV
Sbjct: 288 VGSLIGKGGAVVRALQNESGASIKVSDPTHDSEERIIVISARENLERRHSLAQDGVMRVH 347
Query: 388 TRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCA 447
RI I V+ RLLV S IG LLGKGG +I+EMR+ +GA IR+ KDQ K
Sbjct: 348 NRIVE-IGFEPSAAVVARLLVHSPYIGRLLGKGGHLISEMRRATGASIRVFAKDQATKYE 406
Query: 448 SENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSI--------------------- 486
S+++E+V + G + VQ+ALFQI RLR F P
Sbjct: 407 SQHDEIVQVIGNLKTVQDALFQILCRLREAMFPGRLPFQGLGGPPPPFMGPYPEPPPPFG 466
Query: 487 --NRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDH 544
P +P SP SF R PG GP F + PP P S+ P
Sbjct: 467 PRQYPASPDRYH--SPVGSF-HERHCHGPGFDRPPGPGFDR------PPSPMSWTPQPGI 517
Query: 545 SAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQ 604
H GM P PD+ G P+G + V +V+P++ + +
Sbjct: 518 DG-----HPGGMVP--PDVN----HGFALRNEPIGSEN-PAMTSANVEIVIPQAYLGHVY 565
Query: 605 GEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVM 657
GE+ + L I+Q+S A + + DPK GATE ++++SGT +Q H AQSL+ AF++
Sbjct: 566 GENCSNLNYIKQVSGANVVVHDPKAGATEGLVVVSGTSDQAHFAQSLLHAFIL 618
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 110/396 (27%), Positives = 166/396 (41%), Gaps = 121/396 (30%)
Query: 315 EILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAV-SGTEDRLIVI---SGPA 370
E + FRLLC R G +IGKGG++IR L+ TG I+V++ + +E+R+++I SG
Sbjct: 17 ESVHFRLLCPAARTGAIIGKGGSVIRHLQSVTGSKIRVIDDIPVPSEERVVLIIAPSGKK 76
Query: 371 HPDDRI-------------------------------SAPQDAVLRVQTRI-----ARAI 394
D + S+ Q A+LRV RI A ++
Sbjct: 77 KDDSNVFDSENPSSEEPKQEKGSECAGTSGGDDEEAPSSAQMALLRVLERIVFGDDAASV 136
Query: 395 P----DNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASEN 450
D E + R++V NQ+ L+ KGG +I +R+ SGA +RI DQIP CA
Sbjct: 137 DGDGLDKGESESLCRMIVRGNQVDFLMSKGGKMIQRIREDSGAIVRISSTDQIPPCAFPG 196
Query: 451 EEVVL--INGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSPFPSFIGRR 508
+ V+ I G+F +V++AL IT L+ P D+ PFP
Sbjct: 197 DVVIQMKITGKFSSVKKALLLITNCLQESG------------APPTWDEC-PFPQ----- 238
Query: 509 ELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGP 568
PG + P +H + +HP DH PP+
Sbjct: 239 ----PG----YPPDYHSME----------YHPQWDH------------PPN--------- 259
Query: 569 QGLMEVGGPMGFPDFVGPPHRRV-------PVVVPRSLVPIIQGEDGACLKQIRQISDAK 621
PM P+ V P +R V ++ P V + G+ GA ++ ++ S A
Sbjct: 260 --------PM--PEDVVPFNRPVVEEEVSFRLLCPADKVGSLIGKGGAVVRALQNESGAS 309
Query: 622 ITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVM 657
I ++DP + E +I+IS E SL Q VM
Sbjct: 310 IKVSDPTHDSEERIIVISAR-ENLERRHSLAQDGVM 344
>gi|357159179|ref|XP_003578365.1| PREDICTED: poly(rC)-binding protein 2-like [Brachypodium
distachyon]
Length = 629
Score = 258 bits (658), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 196/563 (34%), Positives = 277/563 (49%), Gaps = 84/563 (14%)
Query: 159 ALLLVFERMVEVEPETEVA---DQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI--- 212
A + V+ER+V + A ++E + R+L QVGC+LGKGG ++++
Sbjct: 81 AAVRVWERVVGHRVGGDDAGEGEEEKEVTGVVGCRMLAAGGQVGCVLGKGGKTVERMRQE 140
Query: 213 -----------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNP 261
D++P CAL DE++ I+G RKAL L+S L DN PR S
Sbjct: 141 SGAQIRVFRNKDQVPPCALQGDELIHISGSFSAARKALLLVSTCLQDN-PRLETS--NFS 197
Query: 262 TGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHE---SGVLDRPKPSPEI-- 316
TG S P V + R +PP IP +H S + P P I
Sbjct: 198 TGRSFGPPGSGVGCPPGVDSHSQRSY------LPPHIPDYHARNFSSNVAAPGPRFFIEQ 251
Query: 317 -LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDR 375
+ FR++C +E VGG+IGKGGA IR+L+ +TG +KV++AV+ +++R+IVIS + +
Sbjct: 252 EIVFRMICLNEMVGGIIGKGGATIRALQSDTGASVKVIDAVADSDERVIVISARENSEMM 311
Query: 376 ISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYI 435
S QDAVLRV +RI+ A D + V RLLV S IGCLLGKGGSIIAEMR ++GA I
Sbjct: 312 HSPAQDAVLRVYSRISEASMD-KSSAVPARLLVPSQHIGCLLGKGGSIIAEMRNVTGASI 370
Query: 436 RILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFL 495
RI G +QIP+CA N+E+V + G F+++Q+AL IT R+R + P P
Sbjct: 371 RIFGNEQIPRCAQRNDELVQVTGNFQSIQDALLHITGRIR---------DVIIPPKPHPS 421
Query: 496 DQVSPF------PSFIGRRELSPPGMYSNFGPS-FHKFDA--------VGGPPPPGSF-- 538
+SP+ P R++ +PP P H F V PPG
Sbjct: 422 GGMSPYPPAGSTPHHPSRQDPAPPHHSGGMPPYPMHPFRPNHPMGPFDVADHRPPGQHPA 481
Query: 539 HPHD----DHSAFMHHIHRPGMPPHM--PDMKPWGPQGLMEVGGPMGFPD---------- 582
HP + D + + + G P + P + W P+ P PD
Sbjct: 482 HPMEHMGADRIPYSYGCEQGGPRPFLEQPSPRTWAPEA-QTADAPRSIPDKGLAMDSRKG 540
Query: 583 --------FVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATET 634
P VV+P + I G +G+ L +I++IS A IT+ DPKPG T+
Sbjct: 541 SVAGSENQVATPTSTTTEVVIPCKYIGFICGTNGSDLAEIQKISGAAITVHDPKPGDTDA 600
Query: 635 VIIISGTPEQTHAAQSLIQAFVM 657
+ + G PEQT AQSLI AF+
Sbjct: 601 SVFVCGDPEQTKKAQSLIHAFIF 623
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 113/440 (25%), Positives = 177/440 (40%), Gaps = 97/440 (22%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
I+FR++C + G+IGK G + + DTG +++V + V+ SDER++VI A +
Sbjct: 253 IVFRMICLNEMVGGIIGKGGATIRALQSDTGASVKVIDAVADSDERVIVISARE------ 306
Query: 106 ENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFE 165
NSE S Q A+L V+
Sbjct: 307 ------------------------------------------NSEMMHSPAQDAVLRVYS 324
Query: 166 RMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI------------- 212
R+ E + KSS RLLV S +GCLLGKGG +I ++
Sbjct: 325 RISEASMD---------KSSAVPARLLVPSQHIGCLLGKGGSIIAEMRNVTGASIRIFGN 375
Query: 213 DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDN--SPRDHESIPGNPTGPSHPLPD 270
+++P CA +DE+VQ+TG +++ AL I+ ++ D P+ H S +P P+ P
Sbjct: 376 EQIPRCAQRNDELVQVTGNFQSIQDALLHITGRIRDVIIPPKPHPSGGMSPYPPAGSTPH 435
Query: 271 HSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLD----RPKPSPEILTFRLLCHDE 326
H AP H PM P P H G D RP + D
Sbjct: 436 HPSRQDPAPP---HHSGGMPPYPMHPFRPN-HPMGPFDVADHRPPGQHPAHPMEHMGAD- 490
Query: 327 RVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRV 386
R+ G R ++ EA + R I G A D R + +V
Sbjct: 491 RIPYSYGCEQGGPRPFLEQPSPRTWAPEAQTADAPRSIPDKGLAM-DSR----KGSVAGS 545
Query: 387 QTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKC 446
+ ++A + T +++ IG + G GS +AE++K+SGA I + D P
Sbjct: 546 ENQVATPT------STTTEVVIPCKYIGFICGTNGSDLAEIQKISGAAITV--HDPKP-- 595
Query: 447 ASENEEVVLINGEFEAVQEA 466
+ + V + G+ E ++A
Sbjct: 596 -GDTDASVFVCGDPEQTKKA 614
>gi|357476219|ref|XP_003608395.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355509450|gb|AES90592.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 616
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 203/675 (30%), Positives = 315/675 (46%), Gaps = 139/675 (20%)
Query: 44 GGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKE 103
G ++FR+LC S+I IGK G ++ + Q TG IR+++ ER++V+
Sbjct: 18 GHVVFRLLCHASRIGAFIGKSGSVIKSLQQLTGARIRIDDAPVDCPERVIVV-------- 69
Query: 104 TSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETS-KVQKALLL 162
+ LN + + S Q+ALL
Sbjct: 70 ----------------------------------------IVNLNGDGDVSLNPQEALLK 89
Query: 163 VFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI---------- 212
VFER+++V +D RLLV + Q G ++GKGG V+ +I
Sbjct: 90 VFERILDVAAAE--SDGNGVGDRVVSCRLLVNAGQAGGVIGKGGMVVAKIRADTGCRIRV 147
Query: 213 --DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPD 270
DKLP C SDE+++I G +V+KAL ++ +L D P D + G T P
Sbjct: 148 LNDKLPACTKPSDEIIEIQGIASSVKKALVAVAGRLQDCPPLDRTKMMG--TRPYEAF-- 203
Query: 271 HSVSSQGAPYATGHRDVADIHLPM------PPSIPKFHESGVLDRPKP-----------S 313
Q A H + D+++ S +GV + P
Sbjct: 204 -----QNETSAVPHEGLTDLNMDFRLQRSSAISTSSIRSNGVPSKSHPLSVEDNRVSSLD 258
Query: 314 PEIL----TFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGP 369
PE L TFR+LC +R+G V+GKGG+I+++L+ ETG +I V V EDRLI I+
Sbjct: 259 PEALKQEVTFRILCSGDRIGAVLGKGGSIVKALQNETGANISVGPPVVECEDRLITITAL 318
Query: 370 AHPDDRISAPQDAVLRVQTR-----IARAIP--DNREQTVMTRLLVASNQIGCLLGKGGS 422
+P+ R S Q+AV+ V R I + + N+E +V +L+V SNQ+G LLGKGG+
Sbjct: 319 ENPESRFSPAQEAVVLVFCRSIECCIEKVVDWRSNKESSVTAQLVVPSNQVGVLLGKGGA 378
Query: 423 IIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDA 482
I++EMRK + IRI ++PKCAS N++VV I+GE V++AL+ T RLR H F A
Sbjct: 379 IVSEMRKATWTSIRITRNGEVPKCASFNDQVVQISGELPNVRDALYNATRRLRDHIFLIA 438
Query: 483 FPS-----INRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDA--------- 528
S RP + P +G + + + SN GPS H
Sbjct: 439 QNSGGTGPYRRPRD--------SIPLGLGGQSV----VGSNHGPSIHSLSQSMDHLTLSR 486
Query: 529 -VGGPPPPGSFHPH---DDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFV 584
G G + P +S + R + P D++ + G +
Sbjct: 487 NSGRSASSGVWAPKVVGGKNSRYTDDAGRR-LNPREGDLE-------LASGSNTVIGNAA 538
Query: 585 GPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETV-IIISGTPE 643
+ V +++P ++ + GE+G+ L Q+RQIS AK+ +P+PG ++ I++SGTP+
Sbjct: 539 IITNTTVEIMLPNDIIGSVYGENGSNLDQLRQISGAKVVFHEPRPGTSDRAKIVLSGTPD 598
Query: 644 QTHAAQSLIQAFVMS 658
+T AAQSL+QA++++
Sbjct: 599 ETQAAQSLLQAYILN 613
>gi|218202392|gb|EEC84819.1| hypothetical protein OsI_31905 [Oryza sativa Indica Group]
Length = 617
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 191/551 (34%), Positives = 272/551 (49%), Gaps = 79/551 (14%)
Query: 163 VFERMV--EVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI-------- 212
+ER+V V + ++E R+L S QVGC+LGKGG ++++
Sbjct: 84 AWERVVGHRVGGDEAAGEEEREVPGVVGCRMLAASGQVGCVLGKGGKTVERMRQESGAQI 143
Query: 213 ------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSH 266
D+LP A DE++ I+G VRKAL L++ L DN
Sbjct: 144 RVFRNRDQLPPWAAPVDELIHISGNFSAVRKALLLVTTCLQDN----------------- 186
Query: 267 PLPDHSVSSQGAPYATGHRDVADIHLP---MPPSIPKFHESGVL-DRPKPSPEI-----L 317
P PD S G G + D H +PPS+P +H + P P +
Sbjct: 187 PRPDASNFPPGRFGPPGPVGI-DPHSQRGYLPPSMPDYHARNYSSNMAAPGPRFFVEQEI 245
Query: 318 TFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRIS 377
FR++C +E VG +IGKGG+ IR+L+ ETG IK++E S +E+R+IVIS + + S
Sbjct: 246 VFRMICLNEMVGSIIGKGGSTIRALQSETGASIKIIEPNSDSEERVIVISAHENSEMMHS 305
Query: 378 APQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRI 437
QDAVLRV +RI+ + D + V RLLV S IGCLLGKGGSIIAEMRK++GA IRI
Sbjct: 306 PAQDAVLRVHSRISESSMD-KSSAVTARLLVPSQHIGCLLGKGGSIIAEMRKITGAGIRI 364
Query: 438 LGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFF----------------RD 481
G +QIP+CA N+E+V + G F+++Q+AL IT R+R +
Sbjct: 365 FGNEQIPRCAQRNDELVQVTGSFQSIQDALLHITGRIRDVIIPMKPHPGGGMPPYPPGGN 424
Query: 482 AFPSINR----PLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGS 537
A P R P +PT P PSF R + P M + P H + +G P S
Sbjct: 425 APPHHPRQEPAPPHPTGGMPPYPMPSFRADRPMGPFDMVDHRPPPPHSMEHMGADRMPYS 484
Query: 538 F--------HPHDDH---SAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGP 586
+ P D SA+ P +MP+ P P + G + + V
Sbjct: 485 YGCEQGGGPRPFLDQPSPSAWAPEAPNSEAPRNMPETVP--PADFRK--GAVAGTNQVAT 540
Query: 587 PHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTH 646
P V++PR + I G +G+ L +I+++S A IT+ PKPG ++II G P+QT
Sbjct: 541 PSNATEVIIPRKYIGFICGANGSDLAEIKKMSGATITVHHPKPGDANALVIICGDPDQTK 600
Query: 647 AAQSLIQAFVM 657
AQSL+ AF+
Sbjct: 601 KAQSLLHAFIF 611
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 116/289 (40%), Gaps = 101/289 (34%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
I+FR++C + +IGK G + + +TG +I++ E S S+ER++VI A +N
Sbjct: 245 IVFRMICLNEMVGSIIGKGGSTIRALQSETGASIKIIEPNSDSEERVIVISAHEN----- 299
Query: 106 ENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFE 165
SE S Q A+L V
Sbjct: 300 -------------------------------------------SEMMHSPAQDAVLRVHS 316
Query: 166 RMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDK----------- 214
R +++ KSS RLLV S +GCLLGKGG +I ++ K
Sbjct: 317 R---------ISESSMDKSSAVTARLLVPSQHIGCLLGKGGSIIAEMRKITGAGIRIFGN 367
Query: 215 --LPTCALASDEVVQITGEVDTVRKALKLISHQLLD--------------------NSPR 252
+P CA +DE+VQ+TG +++ AL I+ ++ D N+P
Sbjct: 368 EQIPRCAQRNDELVQVTGSFQSIQDALLHITGRIRDVIIPMKPHPGGGMPPYPPGGNAPP 427
Query: 253 DH---ESIPGNPTG--PSHPLPDHSVSSQGAPYATGHRDVADIHLPMPP 296
H E P +PTG P +P+P P+ D+ D H P PP
Sbjct: 428 HHPRQEPAPPHPTGGMPPYPMPSFRADRPMGPF-----DMVD-HRPPPP 470
>gi|356522258|ref|XP_003529764.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 559
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 192/565 (33%), Positives = 279/565 (49%), Gaps = 131/565 (23%)
Query: 152 ETSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQ 211
E S Q AL+ VFER V+ E TK+S +L+ S QVGC+LG+GG ++++
Sbjct: 61 EESAAQVALVRVFERTVD----------EETKNSTVSCKLVAPSYQVGCVLGRGGKIVEK 110
Query: 212 I-------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIP 258
I D+ P +E +QITG V+KA+ +S DN+
Sbjct: 111 IRQDTGAHIRVLPKDQPPLPPPPGEEFIQITGNFGAVKKAVLSVSACFYDNN-------- 162
Query: 259 GNPTGPSHPLPDHS--VSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEI 316
+G PL HS S+ A +++ HR + E
Sbjct: 163 ---SGAFKPLDHHSRGCYSESAGHSS-HRMFLE-------------------------ED 193
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
+ F+LLCH E+VG +IGKGG+++R+L+ ETG I+++EA +++R++VIS + +
Sbjct: 194 VVFKLLCHHEKVGSLIGKGGSVVRALQNETGASIQIVEAGPDSDERVVVISARETSEQKH 253
Query: 377 SAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIR 436
S Q+AV+RV R+ I V+ +LLV S Q+GCLLGKGG +I+EMR+++GA IR
Sbjct: 254 SPAQEAVIRVHCRLTE-IGFEPSAAVVAKLLVRSPQVGCLLGKGGLVISEMRRVTGASIR 312
Query: 437 ILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLD 496
I K+QI K S+NEEVV + G ++VQ+ALF IT+R+R F P P F
Sbjct: 313 IFSKEQI-KYISQNEEVVQVIGSLQSVQDALFHITSRIRETIFPIRTP-------PNF-- 362
Query: 497 QVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHD---------DHS-- 545
S P F P H + G PPPP HPHD DH
Sbjct: 363 ------SAPPHLPPFPEMPPPLFRPRNHLMSS-GHPPPPQVGHPHDHSTVPPMPVDHQQH 415
Query: 546 AFMHHIHRPGMPPHMPDM------------KPWGP---------------------QGLM 572
AF+H + R PP+M + + W P + L
Sbjct: 416 AFVHGMGR--GPPNMDRVPYPRGYEGPNSPRSWNPLAVNRGNSGGTADTSSLASRNENLG 473
Query: 573 EVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGAT 632
E G P+ P+ + + + +P + + GE+ + L QIRQ S A + + DPKPGAT
Sbjct: 474 ENGNPLQNPNNL-----TIEITIPHMYLTHVYGENNSNLTQIRQTSGANVVVHDPKPGAT 528
Query: 633 ETVIIISGTPEQTHAAQSLIQAFVM 657
E ++I+SG P+QTHAAQSLIQAF++
Sbjct: 529 EGLVIVSGAPDQTHAAQSLIQAFIL 553
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 87/163 (53%), Gaps = 19/163 (11%)
Query: 310 PKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGP 369
P +P+ + FR++C + V GG G I V + VS E+R++VI G
Sbjct: 13 PPAAPDAV-FRIVCPAAKTEDVATIGG---------DGAKILVEDLVSA-EERVVVIVGE 61
Query: 370 AHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRK 429
SA Q A++RV R + + TV +L+ S Q+GC+LG+GG I+ ++R+
Sbjct: 62 E------SAAQVALVRVFERTVDE--ETKNSTVSCKLVAPSYQVGCVLGRGGKIVEKIRQ 113
Query: 430 LSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITT 472
+GA+IR+L KDQ P EE + I G F AV++A+ ++
Sbjct: 114 DTGAHIRVLPKDQPPLPPPPGEEFIQITGNFGAVKKAVLSVSA 156
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 97/213 (45%), Gaps = 69/213 (32%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
++F++LC K+ +IGK G ++ + +TG +I++ E SDER+VVI A +ETS
Sbjct: 194 VVFKLLCHHEKVGSLIGKGGSVVRALQNETGASIQIVEAGPDSDERVVVISA----RETS 249
Query: 106 ENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFE 165
E ++ S Q+A++ V
Sbjct: 250 E--------------------------------------------QKHSPAQEAVIRVHC 265
Query: 166 RMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKLPTCAL----- 220
R+ E+ E S+ V +LLV S QVGCLLGKGG VI ++ ++ ++
Sbjct: 266 RLTEIGFE---------PSAAVVAKLLVRSPQVGCLLGKGGLVISEMRRVTGASIRIFSK 316
Query: 221 -------ASDEVVQITGEVDTVRKALKLISHQL 246
++EVVQ+ G + +V+ AL I+ ++
Sbjct: 317 EQIKYISQNEEVVQVIGSLQSVQDALFHITSRI 349
>gi|326513114|dbj|BAK06797.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 627
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 190/529 (35%), Positives = 263/529 (49%), Gaps = 79/529 (14%)
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQI--------------DKLPTCALASDEVVQITGEVDT 234
R+L QVGC+LGKGG ++++ +++P CAL DE++ I+G
Sbjct: 112 CRMLAAGGQVGCVLGKGGKTVERMRQESGAQIRVFRNREQVPPCALQGDELIHISGSFSA 171
Query: 235 VRKALKLISHQLLDNSPRDHESIP-GNPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLP 293
RKAL L+S L DN D + P G P GP P V P H + +LP
Sbjct: 172 ARKALLLVSTCLQDNPRPDTSNFPSGRPFGP----PGSGVGC--PPGVDPHSQRS--YLP 223
Query: 294 MPPSIPKFHESGVLDR-PKPSPEI-----LTFRLLCHDERVGGVIGKGGAIIRSLKQETG 347
PP +P +H P P + FR++C ++ VGGVIGKGG+ IR+L+ ETG
Sbjct: 224 -PPHVPDYHARNFSSNGAAPGPRFFVEQEIVFRMICLNDMVGGVIGKGGSTIRALQSETG 282
Query: 348 CDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLL 407
+KV++ V+ +++R+IVIS + + S QDA+LRV ++I+ A D + +V RLL
Sbjct: 283 ASVKVIDPVADSDERIIVISARENSEMMRSPSQDALLRVYSKISEASMD-KSSSVPARLL 341
Query: 408 VASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEAL 467
V + IGCLLGKGGSIIAEMRKL+GA IRI G +QIP+CA N+E+V + G F+++Q+AL
Sbjct: 342 VPAQHIGCLLGKGGSIIAEMRKLTGASIRIFGNEQIPRCAQRNDELVQVTGSFQSIQDAL 401
Query: 468 FQITTRLRHHFF-RDAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPS-FHK 525
IT R+R PS P P + PS R+ +P P H
Sbjct: 402 LHITGRIRDLIIPPKPHPSGGMPPYPPVGN-----PSHHQSRQEAPSHHSGGMPPYPMHP 456
Query: 526 FDAVGGPPPPGSFHPHD------DHSAFMHHIHRPGMP-PH------------MPDMKPW 566
F PP G F D S M H+ MP P+ P + W
Sbjct: 457 FRPN---PPMGPFDVADPRPPGPPPSHPMEHMGADRMPYPYGCEQGGPRPFVEQPSPRTW 513
Query: 567 GPQGLMEVGGPMGFPDFV------------------GPPHRRVPVVVPRSLVPIIQGEDG 608
P+ P PD V P VV+P + + G +G
Sbjct: 514 APEA-PATDAPRSMPDTVPAVDFRKGPVSSSENQVATPATTTTEVVIPCKYIGFVCGTNG 572
Query: 609 ACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVM 657
+ L +I++IS A IT+ DPKPG T + +II G PEQT AQSLI AF+
Sbjct: 573 SDLDEIKKISGAAITVHDPKPGDTNSTVIICGDPEQTKKAQSLIHAFIF 621
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 108/249 (43%), Gaps = 73/249 (29%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
I+FR++C + GVIGK G + + +TG +++V + V+ SDER++VI A +N
Sbjct: 252 IVFRMICLNDMVGGVIGKGGSTIRALQSETGASVKVIDPVADSDERIIVISAREN----- 306
Query: 106 ENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFE 165
SE S Q ALL V+
Sbjct: 307 -------------------------------------------SEMMRSPSQDALLRVYS 323
Query: 166 RMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKL---------- 215
++ E + KSS RLLV + +GCLLGKGG +I ++ KL
Sbjct: 324 KISEASMD---------KSSSVPARLLVPAQHIGCLLGKGGSIIAEMRKLTGASIRIFGN 374
Query: 216 ---PTCALASDEVVQITGEVDTVRKALKLISHQLLD--NSPRDHESIPGNPTGPSHPLPD 270
P CA +DE+VQ+TG +++ AL I+ ++ D P+ H S G P P P
Sbjct: 375 EQIPRCAQRNDELVQVTGSFQSIQDALLHITGRIRDLIIPPKPHPSG-GMPPYPPVGNPS 433
Query: 271 HSVSSQGAP 279
H S Q AP
Sbjct: 434 HHQSRQEAP 442
>gi|356519471|ref|XP_003528396.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 591
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 195/656 (29%), Positives = 322/656 (49%), Gaps = 121/656 (18%)
Query: 39 SKSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEAS 98
S+ + + FR+LC S++ +IGK G ++ + + TG IR+E+ S +R++++ A
Sbjct: 18 SRPYTTHVTFRLLCHASRVGAIIGKSGVLIKTLQEATGAKIRIEDAPPDSPDRVILVSA- 76
Query: 99 DNKKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQK 158
S+ E S Q
Sbjct: 77 ----------------------------------------------PAAASDGEVSTAQV 90
Query: 159 ALLLVFERMVEVEPET---EVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI--- 212
ALL VF+R+++V ET EV D+ RLL ++QVG ++GK G V+++I
Sbjct: 91 ALLKVFDRVLDVAAETAGTEVGDR------VVSCRLLADTSQVGAVIGKAGKVVEKIRMD 144
Query: 213 ---------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNP-- 261
+ LP C SDE+V++ G++ +V+KAL +S L D P D + G+
Sbjct: 145 TGCKIRVLNEGLPACTAPSDEIVEVEGQLTSVKKALVAVSGCLQDCPPPDRTKMTGSRHY 204
Query: 262 ---TGPSHPLPDHSVSS-------QGAPYATGHRDVADIHLPMPPSI-PKFHESGVLDRP 310
+ +P S+++ Q + + + ++ + P + + + LD P
Sbjct: 205 EVVRSETCSVPLESLTNLHIDRRLQRSSTLSTLSNRSNGNASGAPKLSAEVNRVSALD-P 263
Query: 311 KPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGP- 369
K + +TFR++C ++RVG VIGKGG+I+R+L+ E+G I ++ EDRL+ I+
Sbjct: 264 KALQQEVTFRIICSNDRVGAVIGKGGSIVRALQNESGAIISFGPSLVECEDRLVTITASE 323
Query: 370 AHPDDRISAPQDAVLRVQTRIARA-------IPDNREQTVMTRLLVASNQIGCLLGKGGS 422
+P+ R S Q AV+ V ++ A + +E V +L+V SNQ+GCLLGKGG+
Sbjct: 324 QNPESRYSPAQKAVVLVFSKSVEAGVEKGLDMGSKKESYVTAQLVVPSNQVGCLLGKGGA 383
Query: 423 IIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDA 482
I++EMRK +GA IR++G D++PKC S+N+++V I+GEF VQ A++ T R RD
Sbjct: 384 IVSEMRKATGANIRVIGNDKVPKCVSDNDQLVQISGEFSNVQAAIYNATGR-----LRDN 438
Query: 483 FPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHD 542
F+ + G R LS + S P+ ++ PG P
Sbjct: 439 L----------FVSTQNSG----GARSLSS--VLSGGKPTVAVSLSLNRHSLPGLQAPQT 482
Query: 543 DHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPI 602
A ++ G+ + K GL V G + V + VP ++
Sbjct: 483 --VAGINSRVTNGVSRGLTSQKG----GLELVSGS----KTAIVTNTTVQIAVPDDVIGS 532
Query: 603 IQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMS 658
+ GE+G+ L ++RQIS AK+ + +P+PG ++ IIISGTP++T AAQSL+QAF+++
Sbjct: 533 VYGENGSNLARLRQISGAKVIVHEPRPGTSDRTIIISGTPDETRAAQSLLQAFILA 588
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 113/187 (60%), Gaps = 8/187 (4%)
Query: 295 PPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVME 354
P S P H +G ++R +P +TFRLLCH RVG +IGK G +I++L++ TG I++ +
Sbjct: 4 PNSNPN-HSNGHVNRSRPYTTHVTFRLLCHASRVGAIIGKSGVLIKTLQEATGAKIRIED 62
Query: 355 AVSGTEDRLIVISGPAHPDD-RISAPQDAVLRVQTRIARAIPDNR-----EQTVMTRLLV 408
A + DR+I++S PA D +S Q A+L+V R+ + ++ V RLL
Sbjct: 63 APPDSPDRVILVSAPAAASDGEVSTAQVALLKVFDRVLDVAAETAGTEVGDRVVSCRLLA 122
Query: 409 ASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALF 468
++Q+G ++GK G ++ ++R +G IR+L + +P C + ++E+V + G+ +V++AL
Sbjct: 123 DTSQVGAVIGKAGKVVEKIRMDTGCKIRVL-NEGLPACTAPSDEIVEVEGQLTSVKKALV 181
Query: 469 QITTRLR 475
++ L+
Sbjct: 182 AVSGCLQ 188
>gi|357445989|ref|XP_003593272.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
gi|355482320|gb|AES63523.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
Length = 766
Score = 252 bits (643), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 200/621 (32%), Positives = 295/621 (47%), Gaps = 113/621 (18%)
Query: 20 PNGKEKSQKLAGDYSENQPSKSFP---GGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTG 76
PNG K K P + P G + FR+LC S+I GVIGK G ++ + TG
Sbjct: 24 PNGSSKRAK-----PSKPPQQPLPIPAGHVAFRLLCNSSRIGGVIGKSGTVIKNLQLTTG 78
Query: 77 VTIRVEETVSGSDERLV-VIEASDNKKETSENLEASIERSENNGREEASVADESDNKKED 135
IR+E++ + S +R++ VI AS N++ + ++G EA
Sbjct: 79 AKIRIEDSPNESPDRVIMVIGAS--------NIDGKVMVRSHSGDGEA------------ 118
Query: 136 SVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLS 195
E SK Q+ALL VF+R++EV E E + + S RL+ S
Sbjct: 119 ---------------IEVSKAQEALLRVFDRILEVAAEMEGIELGDRTVS---CRLVADS 160
Query: 196 TQVGCLLGKGGCVIKQI------------DKLPTCALASDEVVQITGEVDTVRKALKLIS 243
Q G ++GKGG V+++I D LP C + DEV++I G V +V+KAL +S
Sbjct: 161 AQAGSVIGKGGKVVEKIKKDTGCKIWVCKDNLPACISSPDEVIEIEGSVSSVKKALVAVS 220
Query: 244 HQLLDNSPRD--------------HESIPGNPTGPSHPLPDHSVSSQGAP----YATGHR 285
L D D HE++ G P +P + GAP A
Sbjct: 221 RNLQDRHHADRTKMTGQNSHEVIHHEALVGVPRETLMSVPRETF--IGAPRETLTAVPCE 278
Query: 286 DVADIH----------LPMPPSIPKFHESGV------LDR-----PKPSPEILTFRLLCH 324
+ D+H L + PS + +GV ++R PK + +TF+++C
Sbjct: 279 TLTDLHVDHLLQRRSALSILPSSSNSYATGVHSLSAEVNRVSSLEPKAHQQEITFKIICS 338
Query: 325 DERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVL 384
++R+GGVIGKGG IIR+L+ ETG + V +V+ EDRLI I+ P+ R S Q A +
Sbjct: 339 NDRIGGVIGKGGNIIRALQSETGATVSVGPSVAECEDRLITITASESPESRYSPAQKATV 398
Query: 385 RVQTR-----IARAIPD--NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRI 437
V +R I + I N +V +L+V+SNQ+GCLLGKGG I++EMRK +GA IRI
Sbjct: 399 LVFSRSVEAGIEKGIDSGLNTGSSVTAQLVVSSNQVGCLLGKGGVIVSEMRKATGASIRI 458
Query: 438 LGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQ 497
+G D++ KCAS+N++VV I+GEF VQ+AL+ T RLR + F S +
Sbjct: 459 VGTDKVSKCASDNDQVVQISGEFSNVQDALYNATGRLRDNLFGGTLKSAGTRSLSSVQSD 518
Query: 498 VSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAF--MHHIHRPG 555
SP+ GR P G S+ + F + P G D S + + + G
Sbjct: 519 TSPY----GRLRDVPLGSQSSLRADTNAFVRLRDVPLVGQSSLQADTSPYVRLRDVSLGG 574
Query: 556 MPPHMPDMKPWGPQGLMEVGG 576
D P+G + +GG
Sbjct: 575 QSSLQSDTSPYGRLRDIPLGG 595
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 53/68 (77%)
Query: 591 VPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQS 650
+ +VVP + ++ GE+G+ L ++RQIS AK+ I +P+PG ++ I++SG+P++T AAQS
Sbjct: 696 IEIVVPEDTLYLVYGENGSNLARLRQISGAKVVIHEPRPGTSDRTIVLSGSPDETQAAQS 755
Query: 651 LIQAFVMS 658
L+QAF+++
Sbjct: 756 LLQAFILN 763
>gi|226529077|ref|NP_001146029.1| hypothetical protein [Zea mays]
gi|219885375|gb|ACL53062.1| unknown [Zea mays]
gi|414589866|tpg|DAA40437.1| TPA: hypothetical protein ZEAMMB73_485730 [Zea mays]
Length = 624
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 184/534 (34%), Positives = 268/534 (50%), Gaps = 69/534 (12%)
Query: 178 DQENTKSSKFVLRLLVLSTQVGCLLGKGG---------C-----VIKQIDKLPTCALASD 223
++E + R+L QVGC+LGKGG C V + ++LP A D
Sbjct: 100 EEEREVTGAVGCRMLAAGWQVGCVLGKGGKTVERMRQECGAQIRVFRNREQLPPWAPPGD 159
Query: 224 EVVQITGEVDTVRKALKLISHQLLDNSPRDHESIP-GNPTGPSHPLPDHSVSSQGAPYAT 282
E++ I+G VRKAL +S L DN D +IP G P G LP S G P
Sbjct: 160 ELIHISGSFSQVRKALLAVSTCLQDNPRPDTHNIPIGRPFG----LPG---SGTGCPPGM 212
Query: 283 GHRDVADIHLPMPPSIPKFHESGV-LDRPKPSPEI-----LTFRLLCHDERVGGVIGKGG 336
D +PP IP +H + P P + FR++ +E VG +IGKGG
Sbjct: 213 ---DPHSQRSYLPPHIPDYHTRNYPSNAGPPGPRFFFEQEIVFRMIILNEMVGSIIGKGG 269
Query: 337 AIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPD 396
+ IR+L+ ETG IK++E V+ +++R++ I+ + D S QDAV+RV +RI+ A D
Sbjct: 270 STIRALQSETGACIKILEPVADSDERVVAITARENSDMLHSPAQDAVVRVYSRISEASID 329
Query: 397 NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLI 456
T RLLV S IGCLLGKGGSII+EMRK++GA IRI G +QIP+CA N+E+V +
Sbjct: 330 RSSHTP-ARLLVPSQHIGCLLGKGGSIISEMRKITGANIRIFGNEQIPRCAQRNDEMVQV 388
Query: 457 NGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMY 516
G F+++Q+AL IT R+R PS P P V P R+E PP ++
Sbjct: 389 TGSFQSIQDALLHITGRIRDVILPKPHPSGGMPPYPP----VGNIPVHQSRQEQPPPHLH 444
Query: 517 SNFG-PSF--HKF--DAVGG--------PPPPGSF-HPHDDHSAFMHHIHRPG------- 555
+ G P + H F DA G PPP S + D +++ + + G
Sbjct: 445 PSGGMPPYPMHPFRPDAPMGHFEMGDHRPPPVHSMEYMGADRMPYLYGVEQGGPRPFLEQ 504
Query: 556 -----MPPHMPDMKPWGPQGLMEV-------GGPMGFPDFVGPPHRRVPVVVPRSLVPII 603
PP P P+ + + GP+ + V P V++P + + +
Sbjct: 505 PSPRTCPPEAPRTNSEVPRNMSDAVPATDFRKGPVAIENQVATPTGTTEVIIPCNYIGFV 564
Query: 604 QGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVM 657
G +G+ +++I ++S A IT+ DPK G + ++I G PE+T AQSLI AF+
Sbjct: 565 CGNNGSEIEEIEKMSGASITVHDPKAGDANSKVVICGDPEETKKAQSLIHAFIF 618
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 119/499 (23%), Positives = 194/499 (38%), Gaps = 138/499 (27%)
Query: 7 PSKRPHDDDNHTEPNGKEKSQKLAGDYSENQPSKSFPGG--------IMFRVLCPVSKID 58
P PH ++ P+ + ++ N PS + P G I+FR++ +
Sbjct: 210 PGMDPHSQRSYLPPH-------IPDYHTRNYPSNAGPPGPRFFFEQEIVFRMIILNEMVG 262
Query: 59 GVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENN 118
+IGK G + + +TG I++ E V+ SDER+V I A +
Sbjct: 263 SIIGKGGSTIRALQSETGACIKILEPVADSDERVVAITARE------------------- 303
Query: 119 GREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVAD 178
NS+ S Q A++ V+ R+ E +
Sbjct: 304 -----------------------------NSDMLHSPAQDAVVRVYSRISEASID----- 329
Query: 179 QENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDK-------------LPTCALASDEV 225
+SS RLLV S +GCLLGKGG +I ++ K +P CA +DE+
Sbjct: 330 ----RSSHTPARLLVPSQHIGCLLGKGGSIISEMRKITGANIRIFGNEQIPRCAQRNDEM 385
Query: 226 VQITGEVDTVRKALKLISHQLLDN-SPRDHESIPGNPTGPSHPLPDHSVSSQGAP---YA 281
VQ+TG +++ AL I+ ++ D P+ H S P P +P H + P +
Sbjct: 386 VQVTGSFQSIQDALLHITGRIRDVILPKPHPSGGMPPYPPVGNIPVHQSRQEQPPPHLHP 445
Query: 282 TGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRS 341
+G +H P P P H RP P + + + D R+ + G R
Sbjct: 446 SGGMPPYPMH-PFRPDAPMGHFEMGDHRPPP---VHSMEYMGAD-RMPYLYGVEQGGPRP 500
Query: 342 LKQE------------TGCDI--KVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQ 387
++ T ++ + +AV T+ R GP +++++ P
Sbjct: 501 FLEQPSPRTCPPEAPRTNSEVPRNMSDAVPATDFR----KGPVAIENQVATP-------- 548
Query: 388 TRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCA 447
T T +++ N IG + G GS I E+ K+SGA I + PK
Sbjct: 549 -------------TGTTEVIIPCNYIGFVCGNNGSEIEEIEKMSGASITV----HDPKAG 591
Query: 448 SENEEVVLINGEFEAVQEA 466
N +VV I G+ E ++A
Sbjct: 592 DANSKVV-ICGDPEETKKA 609
>gi|147789223|emb|CAN69138.1| hypothetical protein VITISV_022038 [Vitis vinifera]
Length = 569
Score = 245 bits (625), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 179/515 (34%), Positives = 270/515 (52%), Gaps = 66/515 (12%)
Query: 172 PETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKLPTCALASDEVVQITGE 231
P QE+T K ++ L+ + + L K I + K V+QI G+
Sbjct: 79 PTASHTAQEDTPKVKLLVDLIFMPYHI--LFEKLFNTIFHVKKWV-------NVLQIEGD 129
Query: 232 VDTVRKALKLISHQLLDNSPRDHES-IPGNP--TGPSHPLPDHSVS-------------S 275
V V+KAL +S +L D D I G P P LPD V S
Sbjct: 130 VLAVKKALVAVSRRLQDCPNVDKTKLIGGRPLEVVPQQSLPDPRVDLFQQRGSVLPPIPS 189
Query: 276 QGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKG 335
YA+G R P SI LD PK S + + F++LC ++RVGGVIGKG
Sbjct: 190 NTISYASGSR---------PLSI-NTERISTLD-PKTSQQEVIFKILCSNDRVGGVIGKG 238
Query: 336 GAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTR-----I 390
G I+++L+ E G I V V+ ++RLI I+ +P+ R S Q+ V+ V R I
Sbjct: 239 GTIVKALQNEAGASISVGAPVAECDERLITITASENPESRYSPAQNGVILVFNRSIEAGI 298
Query: 391 ARAIPDNREQT-VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASE 449
+ + + + V RL+V SNQ+GCL+GKGG+II+EMRK SGA IRI+G DQ+PKCASE
Sbjct: 299 EKGLDSGSKGSPVSARLVVPSNQVGCLMGKGGTIISEMRKASGAGIRIIGSDQVPKCASE 358
Query: 450 NEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSPFPSFIGR-R 508
N++VV I+GEF VQ+ L+ IT RLR + F + + + ++++SP+ GR R
Sbjct: 359 NDQVVQISGEFVNVQDGLYHITGRLRDNLFPSKTLNGAGIRSSSAMNEISPY----GRVR 414
Query: 509 ELSPPGMYSNFG--PSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPD---- 562
+ + G++S+ G PSF + + DH H + P P P
Sbjct: 415 DPASFGLHSSVGVSPSFSRHT---------TLTQSMDHLGLSHSLDHPTSPRLWPSQTVT 465
Query: 563 -MKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAK 621
+ P +G +E+G + V +V+P +++ + GE+G L ++R+IS AK
Sbjct: 466 GVNPRNIKGGIELGSGSKSAIIT---NTTVEIVIPENVIGSVYGENGNNLARLRKISGAK 522
Query: 622 ITITDPKPGATETVIIISGTPEQTHAAQSLIQAFV 656
+T+ +P+PG ++ ++IISGTP++T AAQSL+QAF+
Sbjct: 523 VTLHEPRPGTSDRIVIISGTPDETQAAQSLLQAFI 557
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 100/408 (24%), Positives = 163/408 (39%), Gaps = 119/408 (29%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
++F++LC ++ GVIGK G ++ + + G +I V V+ DERL+ I AS+N
Sbjct: 220 VIFKILCSNDRVGGVIGKGGTIVKALQNEAGASISVGAPVAECDERLITITASENP---- 275
Query: 106 ENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFE 165
E S Q ++LVF
Sbjct: 276 --------------------------------------------ESRYSPAQNGVILVFN 291
Query: 166 RMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI------------- 212
R +E E + +K S RL+V S QVGCL+GKGG +I ++
Sbjct: 292 RSIEAGIEKGL--DSGSKGSPVSARLVVPSNQVGCLMGKGGTIISEMRKASGAGIRIIGS 349
Query: 213 DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDN---------------------SP 251
D++P CA +D+VVQI+GE V+ L I+ +L DN SP
Sbjct: 350 DQVPKCASENDQVVQISGEFVNVQDGLYHITGRLRDNLFPSKTLNGAGIRSSSAMNEISP 409
Query: 252 ----RD------HESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSI--- 298
RD H S+ +P+ H S+ G ++ H P P +
Sbjct: 410 YGRVRDPASFGLHSSVGVSPSFSRHTTLTQSMDHLGLSHSLDH--------PTSPRLWPS 461
Query: 299 -------PKFHESGVLDRPKPSPEIL---TFRLLCHDERVGGVIGKGGAIIRSLKQETGC 348
P+ + G+ I+ T ++ + +G V G+ G + L++ +G
Sbjct: 462 QTVTGVNPRNIKGGIELGSGSKSAIITNTTVEIVIPENVIGSVYGENGNNLARLRKISGA 521
Query: 349 DIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPD 396
+ + E GT DR+++ISG PD+ +A ++L+ +PD
Sbjct: 522 KVTLHEPRPGTSDRIVIISGT--PDETQAA--QSLLQAFIHTGPKVPD 565
>gi|296088778|emb|CBI38228.3| unnamed protein product [Vitis vinifera]
Length = 585
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 178/504 (35%), Positives = 268/504 (53%), Gaps = 68/504 (13%)
Query: 183 KSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKLPTCALASDEVVQITGEVDTVRKALKLI 242
K+SK V S + C++ C IK+ L ++ I G+V V+KAL +
Sbjct: 108 KASKLVYTKRCRSKEKFCIIR---CEIKRKITLI--------MIIIEGDVLAVKKALVAV 156
Query: 243 SHQLLDNSPRDHES-IPGNP--TGPSHPLPDHSVS-------------SQGAPYATGHRD 286
S +L D D I G P P LPD V S YA+G R
Sbjct: 157 SRRLQDCPNVDKTKLIGGRPLEVVPQQSLPDPRVDLFQQRGSVLPPIPSNTISYASGSR- 215
Query: 287 VADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQET 346
P SI S LD PK S + + F++LC ++RVGGVIGKGG I+++L+ E
Sbjct: 216 --------PLSINTERIS-TLD-PKTSQQEVIFKILCSNDRVGGVIGKGGTIVKALQNEA 265
Query: 347 GCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTR-----IARAIPDNREQT 401
G I V V+ ++RLI I+ +P+ R S Q+ V+ V R I + + + +
Sbjct: 266 GASISVGAPVAECDERLITITASENPESRYSPAQNGVILVFNRSIEAGIEKGLDSGSKGS 325
Query: 402 -VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEF 460
V RL+V SNQ+GCL+GKGG+II+EMRK SGA IRI+G DQ+PKCASEN++VV I+GEF
Sbjct: 326 PVSARLVVPSNQVGCLMGKGGTIISEMRKASGAGIRIIGSDQVPKCASENDQVVQISGEF 385
Query: 461 EAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSPFPSFIGR-RELSPPGMYSNF 519
VQ+ L+ IT RLR + F + + + ++++SP+ GR R+ + G++S+
Sbjct: 386 VNVQDGLYHITGRLRDNLFPSKTLNGAGIRSSSAMNEISPY----GRVRDPASFGLHSSV 441
Query: 520 G--PSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPD-----MKPWGPQGLM 572
G PSF + + DH H + P P P + P +G +
Sbjct: 442 GVSPSFSRHT---------TLTQSMDHLGLSHSLDHPTSPRLWPSQTVTGVNPRNIKGGI 492
Query: 573 EVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGAT 632
E+G + V +V+P +++ + GE+G L ++R+IS AK+T+ +P+PG +
Sbjct: 493 ELGSGSKSAIIT---NTTVEIVIPENVIGSVYGENGNNLARLRKISGAKVTLHEPRPGTS 549
Query: 633 ETVIIISGTPEQTHAAQSLIQAFV 656
+ ++IISGTP++T AAQSL+QAF+
Sbjct: 550 DRIVIISGTPDETQAAQSLLQAFI 573
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 97/390 (24%), Positives = 156/390 (40%), Gaps = 117/390 (30%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
++F++LC ++ GVIGK G ++ + + G +I V V+ DERL+ I AS+
Sbjct: 236 VIFKILCSNDRVGGVIGKGGTIVKALQNEAGASISVGAPVAECDERLITITASE------ 289
Query: 106 ENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFE 165
N E S Q ++LVF
Sbjct: 290 ------------------------------------------NPESRYSPAQNGVILVFN 307
Query: 166 RMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI------------- 212
R +E E + +K S RL+V S QVGCL+GKGG +I ++
Sbjct: 308 RSIEAGIEKGL--DSGSKGSPVSARLVVPSNQVGCLMGKGGTIISEMRKASGAGIRIIGS 365
Query: 213 DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDN---------------------SP 251
D++P CA +D+VVQI+GE V+ L I+ +L DN SP
Sbjct: 366 DQVPKCASENDQVVQISGEFVNVQDGLYHITGRLRDNLFPSKTLNGAGIRSSSAMNEISP 425
Query: 252 ----RD------HESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSI--- 298
RD H S+ +P+ H S+ G ++ H P P +
Sbjct: 426 YGRVRDPASFGLHSSVGVSPSFSRHTTLTQSMDHLGLSHSLDH--------PTSPRLWPS 477
Query: 299 -------PKFHESGVLDRPKPSPEIL---TFRLLCHDERVGGVIGKGGAIIRSLKQETGC 348
P+ + G+ I+ T ++ + +G V G+ G + L++ +G
Sbjct: 478 QTVTGVNPRNIKGGIELGSGSKSAIITNTTVEIVIPENVIGSVYGENGNNLARLRKISGA 537
Query: 349 DIKVMEAVSGTEDRLIVISGPAHPDDRISA 378
+ + E GT DR+++ISG PD+ +A
Sbjct: 538 KVTLHEPRPGTSDRIVIISGT--PDETQAA 565
>gi|224135123|ref|XP_002321989.1| predicted protein [Populus trichocarpa]
gi|222868985|gb|EEF06116.1| predicted protein [Populus trichocarpa]
Length = 685
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 197/681 (28%), Positives = 301/681 (44%), Gaps = 133/681 (19%)
Query: 38 PSKSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEA 97
PS + +R+LC K GVIGK G ++ I Q TG I V E + G +ER +IE
Sbjct: 78 PSSTLMVTTSYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEER--IIEI 135
Query: 98 SDNKKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQ 157
SD ++ E S S Q
Sbjct: 136 SDTRRRDPEGRMPSF-----------------------------------------SPAQ 154
Query: 158 KALLLVFERMVEVEPETEVA----------DQENTKSSKFVLRLLVLSTQVGCLLGKGGC 207
+AL L+ +R++E + + V + ++ RL+V VGCLLGKGG
Sbjct: 155 EALFLIHDRILENDLQYGVVSSGAGGFEEDEYVGRGGNRVATRLVVSRMHVGCLLGKGGK 214
Query: 208 VIKQI--------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRD 253
+I+Q+ LP C S+E+VQ+ G+V+ V+ A+ +IS +L ++ RD
Sbjct: 215 IIEQMRMETKTQIRILPRDHTLPRCVSVSEEIVQVIGDVNAVKNAVAIISSRLRESQHRD 274
Query: 254 HESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSI------PKFHESGVL 307
G P L D V P+ R D PPS P + +
Sbjct: 275 RSHFHGRVQSPERFLDDDYV-----PHMNTRRSSMD----GPPSFGSRLSGPNYRNNNYS 325
Query: 308 DRPKPSP-----------------EILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDI 350
R P E L FR+LC ++V V+G+ ++ L+ E G D+
Sbjct: 326 SRAPGFPVDAGADPNADSAQPFYVEDLVFRILCPIDKVNRVVGESDGLVDLLQNEIGVDV 385
Query: 351 KVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVAS 410
KV + VSG+++++I I PDD + Q+A+L +QTRI + D ++ + TRLLV S
Sbjct: 386 KVADPVSGSDEQIITICSEEGPDDELFPAQEALLHIQTRIVDLVAD-KDNIITTRLLVPS 444
Query: 411 NQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
++IGCL G+ GS ++EM L+GA I IL K+ +P S +E+V I GE +A ++AL ++
Sbjct: 445 SEIGCLEGRDGS-LSEMESLTGATIEILPKEMLPTYLSGTDELVQIQGEVKAARDALVEV 503
Query: 471 TTRLRHHFFRDAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVG 530
T+RLR + ++D F + L PT +S PG G + +
Sbjct: 504 TSRLRSYLYKDVF---QKDLPPT----------------VSAPGPAGTAG--GLQAASSN 542
Query: 531 GPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRR 590
P P H D A ++ P D + + + + D P R
Sbjct: 543 NPTPAREGHSGGDPPATYQNVQSASTPQPSKDARGSSAETVKQ-NESEHREDLPPPTMNR 601
Query: 591 VP----------VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISG 640
+P VV+P VP + + L QI ++S A +T+ + +P TE +I ISG
Sbjct: 602 IPVTLVTRSILEVVIPEPAVPKLITKSKNKLAQISELSGANVTLVEDRPDVTEKIIQISG 661
Query: 641 TPEQTHAAQSLIQAFVMSETE 661
TPEQ AQSL+Q F++S E
Sbjct: 662 TPEQAERAQSLLQGFILSIQE 682
>gi|356509231|ref|XP_003523354.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 644
Score = 242 bits (617), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 197/698 (28%), Positives = 315/698 (45%), Gaps = 127/698 (18%)
Query: 10 RPHDDDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIMFRVLCPVSKIDGVIGKDGEMMS 69
RP + +++ A +++ Q +R+LC K GVIGK G ++
Sbjct: 25 RPRYNHHYSTGGNHRHRGGGAARHAKTQQDSPLTVTTSYRILCHDLKAGGVIGKSGSIIK 84
Query: 70 QISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASVADES 129
I Q TG I V E + G +ER +IE SD ++ E S
Sbjct: 85 SIRQHTGAWINVHELMPGDEER--IIEISDTRRRDPEGRMPSF----------------- 125
Query: 130 DNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSK--- 186
S Q+ALLL+ ER++E + VA+++ +
Sbjct: 126 ------------------------SPAQEALLLIHERILESDAAFGVAEEDEEYGGRGGG 161
Query: 187 ---FVLRLLVLSTQVGCLLGKGGCVIKQI--------------DKLPTCALASDEVVQIT 229
RL+V VGCLLGKGG +I+Q+ LP C S+E+VQ+
Sbjct: 162 RDRIATRLVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCVSMSEEIVQVV 221
Query: 230 GEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSH---PLPDH--------------- 271
G V+ V+ AL +IS +L ++ RD G P P D+
Sbjct: 222 GNVNAVKNALVIISSRLRESQHRDRSHFHGRVHSPERFFSPDDDYVPHVTSGSRRSSVDG 281
Query: 272 -SVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGG 330
S S+G+ + + + ++ M P V D E L FR+LC E+V
Sbjct: 282 ASFGSRGSNTNSRNNNHPSLNYAMEPGAAPV----VDDAQGFYGEELVFRILCPIEKVDR 337
Query: 331 VIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRI 390
+IG+ I+ L+ E G D+KV + V G+++++I+I+ PDD + Q+A+L VQTRI
Sbjct: 338 IIGESEGIVEFLQNEVGVDVKVTDPVGGSDEQIIIITSEEGPDDELFPAQEALLHVQTRI 397
Query: 391 ARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASEN 450
+ D ++ T+ TRL+V S++I CL GK S ++E+R+L+GA I+IL +D++P C ++
Sbjct: 398 VDLVLD-KDNTITTRLVVPSSEIECLDGKDVS-LSEIRRLTGANIQILPRDELPLCVAKT 455
Query: 451 EEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSPFPSFIGRREL 510
+E+V I GE +A ++A+ ++T+RLR + +RD F PL P L P + +
Sbjct: 456 DELVQIVGEIKAARDAVVEVTSRLRSYLYRDFFQRDTVPL-PAPL----PGAAASSSNNI 510
Query: 511 SP----PGMYSNF---GPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDM 563
P P Y N + + G G D + ++R +
Sbjct: 511 VPVTETPTTYQNLQTVAAALPSKETGGSSTETGKQKESDRRDDLLSGLNRIAV------- 563
Query: 564 KPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKIT 623
P + +E VV+P VP + + + L QI ++S A +T
Sbjct: 564 -PLVTRSTLE-------------------VVLPEYAVPKLVAKSKSKLAQISELSGANVT 603
Query: 624 ITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSETE 661
+ + +P T+ +I ISGTPEQ AQSL+Q F++S E
Sbjct: 604 LVEDRPDVTQKIIQISGTPEQAERAQSLLQGFILSTQE 641
>gi|302767378|ref|XP_002967109.1| hypothetical protein SELMODRAFT_87147 [Selaginella moellendorffii]
gi|300165100|gb|EFJ31708.1| hypothetical protein SELMODRAFT_87147 [Selaginella moellendorffii]
Length = 506
Score = 242 bits (617), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 175/488 (35%), Positives = 259/488 (53%), Gaps = 72/488 (14%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
+++R+LCP +KI VIGK G ++ + +TG I+V + + GSDER++ I AS
Sbjct: 46 VVYRILCPGAKIGSVIGKGGSIIKSLRNETGAKIKVADGIPGSDERVIFISASPR----- 100
Query: 106 ENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFE 165
ER E R + E D KE + E + L Q+AL VF
Sbjct: 101 -------ERREGKPR---GGSKEMDKDKEQNGEESTPL----------PASQEALFKVFA 140
Query: 166 RMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI------------- 212
R+VE E D++ S RLLV S Q+GCLLGK G +I+Q+
Sbjct: 141 RIVE----GEEFDEDEDSSRNVTARLLVPSNQIGCLLGKAGKIIEQMRVESGAQIRVLPR 196
Query: 213 DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGN--PTGPSHPLPD 270
++LP CA +DE+VQ+TGE+ V+KAL IS +L DN PRD G+ P S LP
Sbjct: 197 EQLPKCAYHTDELVQLTGELALVKKALTTISTRLYDNPPRDKPPQAGHLGPFQESTILPG 256
Query: 271 HSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGG 330
++ GA + G+ +A P RLLC +E++G
Sbjct: 257 -TLLPPGAFFPQGNASIA-----------------------PVEGEFAVRLLCPNEKIGS 292
Query: 331 VIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRI 390
VIGKGG IIRS+++ET IK+ +AV+ E+R+I I+ +++S +AVL++Q+RI
Sbjct: 293 VIGKGGMIIRSIREETCARIKIADAVANAEERVIHITSNEVLHEQVSPALEAVLQLQSRI 352
Query: 391 ARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASEN 450
+ + ++ + TR LV S IGCLLGK GSIIA+MR+ + A IR+L K+ +PKCA E+
Sbjct: 353 SDPSAE-KDGAMTTRFLVPSANIGCLLGKKGSIIADMRRNTRANIRVLSKEALPKCAHED 411
Query: 451 EEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVS-PFPSFIGRRE 509
+E+V + G+ ++A+ +I TRLR + F + +++ NP Q S P S R
Sbjct: 412 DELVQVVGDITVARDAVIEIITRLRANIFSEHMKNVSS--NPGLGVQGSVPVSSTYEPRH 469
Query: 510 LSPPGMYS 517
PGM+S
Sbjct: 470 EPSPGMFS 477
>gi|356516077|ref|XP_003526723.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 647
Score = 241 bits (616), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 197/701 (28%), Positives = 314/701 (44%), Gaps = 130/701 (18%)
Query: 10 RPHDDDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIMFRVLCPVSKIDGVIGKDGEMMS 69
RP + ++T + A +++ Q +R+LC K GVIGK G ++
Sbjct: 25 RPRYNHHYTTAGNQRHRGGGAARHAKTQQDSPLTVTTSYRILCHDLKAGGVIGKSGSIIK 84
Query: 70 QISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASVADES 129
I Q TG I V E + G +ER +IE SD ++ E S
Sbjct: 85 SIRQHTGAWINVHELMPGDEER--IIEISDTRRRDPEGRMPSF----------------- 125
Query: 130 DNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQEN-------- 181
S Q+ALLL+ ER++E + VA+ +
Sbjct: 126 ------------------------SPAQEALLLIHERILESDAAFGVAEDDEEYGAGRGG 161
Query: 182 -TKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI--------------DKLPTCALASDEVV 226
+ RL+V VGCLLGKGG +I+Q+ LP C S+E+V
Sbjct: 162 GAGRDRVATRLVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCVSMSEEIV 221
Query: 227 QITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSH---PLPDH------------ 271
Q+ G+V+ V+ AL +IS +L ++ RD G P P D+
Sbjct: 222 QVVGDVNAVKNALVIISSRLRESQHRDRSHFHGRVHSPERFFSPDDDYVPHVTSGSRRSS 281
Query: 272 ----SVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDER 327
S S+G+ + + + + M P V D E L FR+LC E+
Sbjct: 282 VDGASFGSRGSNTNSRNNNHPSLSYAMEPGAAPV----VDDAQGFYGEELVFRILCPVEK 337
Query: 328 VGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQ 387
V +IG+ I+ L+ E G D+KV + V G+++++I+I+ PDD + Q+A+L +Q
Sbjct: 338 VDLIIGESDGIVEFLQSEVGVDVKVTDPVGGSDEQIIIITSEEGPDDELFPAQEALLHIQ 397
Query: 388 TRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCA 447
TRI + D ++ T+ TRL+V S++I CL GK S ++E+R+L+GA I+IL +D +P C
Sbjct: 398 TRIVDLVLD-KDNTITTRLVVPSSEIECLDGKDVS-LSEIRRLTGANIQILPRDDLPLCV 455
Query: 448 SENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSPFPSFIGR 507
++ +E+V I GE +A ++A+ ++T+RLR + +RD F PL +P P G
Sbjct: 456 AKTDELVQIVGEIKAARDAVVEVTSRLRSYLYRDFFQRDPIPLP-------APLP---GA 505
Query: 508 RELSPPGM--YSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKP 565
S + + ++ V PP G + K
Sbjct: 506 EASSSNNIVPVAETSTTYQNVQTVAAALPPK---------------ETGGSSTEVGKQKE 550
Query: 566 WGPQ-----GLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDA 620
G + GL + P+ + VV+P VP + + + L QI ++S A
Sbjct: 551 SGRRDDVLSGLNRIAVPL-------VTRSTLEVVIPEYAVPKLIAKSKSKLAQISELSGA 603
Query: 621 KITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSETE 661
+T+ + +P T+ +I ISGTPEQ AQSL+Q F++S E
Sbjct: 604 NVTLVEDRPDVTQKIIQISGTPEQAERAQSLLQGFILSTQE 644
>gi|356526304|ref|XP_003531758.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Glycine
max]
Length = 565
Score = 239 bits (610), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 209/663 (31%), Positives = 300/663 (45%), Gaps = 175/663 (26%)
Query: 47 MFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSE 106
+FR++CP +K V G+ G I VE+ V G++ER+VVI
Sbjct: 20 VFRIVCPAAKTADVAAIGGD---------GAKILVEDLV-GAEERVVVI----------- 58
Query: 107 NLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFER 166
V DES Q AL+ V ER
Sbjct: 59 ------------------VGDES-------------------------AAQVALIRVLER 75
Query: 167 MVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDK--------LP-- 216
++ E TK+S +L+ S QVGC+LG+GG ++++I + LP
Sbjct: 76 TMD----------EETKNSTVSCKLVAPSYQVGCVLGRGGKIVEKIRQDSGAHIRVLPKD 125
Query: 217 -TCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSS 275
DE +QITG V+KA+ +S L +N+ + G P PDH S
Sbjct: 126 QPPPPPGDEFIQITGNFGAVKKAVLSVSACLHENNYGAFKPSGGGSYAP----PDHH--S 179
Query: 276 QGA-PYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGK 334
+GA + GH S F E E + F+LLC ++VG +IGK
Sbjct: 180 RGAYSESAGHS-----------SHRMFVE-----------EEVVFKLLCRHDKVGSLIGK 217
Query: 335 GGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAI 394
GG+++R+L+ ETG I+++EA +++R++VIS + + S Q+AV+RV R+ I
Sbjct: 218 GGSVVRALQNETGASIQIVEAGPDSDERVVVISAQETSEQKHSPAQEAVIRVHCRLTE-I 276
Query: 395 PDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVV 454
V+ +LLV S Q+GCLLGKGG +I+EMR+ +GA IRI K+QI K S+NEEVV
Sbjct: 277 GFEPSAAVVAKLLVRSPQVGCLLGKGGLVISEMRRATGASIRIFSKEQI-KYISQNEEVV 335
Query: 455 LINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPG 514
+ G ++VQ+ALF IT R+R F P P S P
Sbjct: 336 QVIGSLQSVQDALFHITNRIRETIFPIRTP---------------PNFSAPPHFPPFPEM 380
Query: 515 MYSNFGPSFHKFDAVGGPPPPGSFHPHD---------DHS--AFMHHIHRPGMPPHMPDM 563
F P H + G PPPP HPHD DH AF+H + R PP+M +
Sbjct: 381 PPPLFRPRNHLMSS-GHPPPPQVGHPHDHSTVPPMPVDHQQHAFVHGMGR--GPPNMDRV 437
Query: 564 ------------KPWGPQGLMEVGGPMGFPD-----------------FVGPPHRRVPVV 594
+ W P + + G P G D P + +
Sbjct: 438 PYPRGYEGPNSPRSWNPLAV-DRGNPGGTADTSSLTSRNETPVKNGNPLQNPNSLTIEIT 496
Query: 595 VPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQA 654
+P + + GE+ + L QIRQ S A + + D KPGATE ++I+SG P+QTHAAQ LIQ
Sbjct: 497 IPYMYLTHVYGENNSNLTQIRQTSGANVAVHDSKPGATEGLVIVSGAPDQTHAAQCLIQG 556
Query: 655 FVM 657
F++
Sbjct: 557 FIL 559
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 90/404 (22%), Positives = 155/404 (38%), Gaps = 142/404 (35%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
++F++LC K+ +IGK G ++ + +TG +I++ E SDER+VVI A +
Sbjct: 200 VVFKLLCRHDKVGSLIGKGGSVVRALQNETGASIQIVEAGPDSDERVVVISAQE------ 253
Query: 106 ENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFE 165
SE++ S Q+A++ V
Sbjct: 254 ------------------------------------------TSEQKHSPAQEAVIRVHC 271
Query: 166 RMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKLPTCAL----- 220
R+ E+ E S+ V +LLV S QVGCLLGKGG VI ++ + ++
Sbjct: 272 RLTEIGFE---------PSAAVVAKLLVRSPQVGCLLGKGGLVISEMRRATGASIRIFSK 322
Query: 221 -------ASDEVVQITGEVDTVRKALKLISHQLLDN------------------------ 249
++EVVQ+ G + +V+ AL I++++ +
Sbjct: 323 EQIKYISQNEEVVQVIGSLQSVQDALFHITNRIRETIFPIRTPPNFSAPPHFPPFPEMPP 382
Query: 250 ---SPRDHESIPGNPTGP--SHPLPDHSVSSQGAPYATGHRDVADIH-----------LP 293
PR+H G+P P HP DHS P H+ A +H +P
Sbjct: 383 PLFRPRNHLMSSGHPPPPQVGHPH-DHSTV---PPMPVDHQQHAFVHGMGRGPPNMDRVP 438
Query: 294 MP-----PSIPKFHESGVLDRPKP------------------------SPEILTFRLLCH 324
P P+ P+ +DR P +P LT +
Sbjct: 439 YPRGYEGPNSPRSWNPLAVDRGNPGGTADTSSLTSRNETPVKNGNPLQNPNSLTIEITIP 498
Query: 325 DERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
+ V G+ + + ++Q +G ++ V ++ G + L+++SG
Sbjct: 499 YMYLTHVYGENNSNLTQIRQTSGANVAVHDSKPGATEGLVIVSG 542
>gi|449492545|ref|XP_004159029.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 716
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 217/686 (31%), Positives = 315/686 (45%), Gaps = 107/686 (15%)
Query: 41 SFPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDN 100
S P +FR+LCP SK+ + + + G I V+E + +E ++VI A
Sbjct: 63 SSPSDTLFRLLCPASKVSSI-------LRHLRDIPGARIHVDEPLPSCEECVLVILAGSP 115
Query: 101 KKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKAL 160
K T N E E++ S SD DS E S+ Q+AL
Sbjct: 116 SKPTHTNPGNDREFREHDVHRNVS----SDTVAGDS--------------DERSQAQQAL 157
Query: 161 LLVFE---RMVEVEPETEVADQENTKSSK------------FVLRLLVLSTQVGCLLGKG 205
L FE RM E E + ++N S+ V RLL S QVG +LG+G
Sbjct: 158 LRTFESIVRMNEDSGENQEIQKKNADSAPNDRISGGETDGLVVCRLLAPSHQVGRVLGRG 217
Query: 206 GCVIKQI-------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPR 252
G +++I D+ P CA DE++QI+G V KAL +S L +SPR
Sbjct: 218 GKTVEKIRQESMAHVKIFPKDQNPACASPQDELIQISGNFSAVMKALSSVS-SCLQDSPR 276
Query: 253 --DHESIPGNPTGPSHPLPDHSVSSQGAP----YATGHRDVADIHLPMPPSIPKFHESGV 306
S GP+ SV + Y + H AD SIP +G
Sbjct: 277 VDSSNSSSTKSLGPTSHASSMSVQDEEPSPRRRYGSHHN--ADYRSRSYSSIPGHENAGA 334
Query: 307 LDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVI 366
R +++ FRLLC ++VG +IGKGG ++R+L+ ETG IK+++ ++RL+VI
Sbjct: 335 GPRAAMEEDVV-FRLLCQPDKVGSLIGKGGTVVRALQNETGASIKIVD-TPDLDERLVVI 392
Query: 367 SGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAE 426
S + S Q+AV+R RIA I V+ RLLV QIG L+G+GG II +
Sbjct: 393 SARETLEQTYSPAQEAVIRAHCRIAE-IGYEPGAAVVARLLVHGQQIGYLVGRGGHIIND 451
Query: 427 MRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFF--RDAFP 484
MR+ +G I+I +DQI ++EVV + G +VQ+ALF IT R+R FF R P
Sbjct: 452 MRRGTGTSIQIFPRDQIQNGGPMSDEVVQVIGNLPSVQDALFHITNRIRDTFFPMRPHVP 511
Query: 485 SINRPLNPTFLD--QVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHD 542
+ N +P +L +P P F PG Y + G PP HP D
Sbjct: 512 NFNN--HPPYLSPHPETPPPLFRPGSNAHSPGYYPSQAGGLR-----GTERPPYHSHPLD 564
Query: 543 DHSAFMHHI------HRPGMP-PH-----------MPDMKPWGPQGLMEV-GGPM-GF-- 580
A+ H++ + G+P PH P + W Q E+ GP GF
Sbjct: 565 HQPAYPHNVSFGGGNNMDGVPYPHGMERPGPGSFERPSPRSWTSQVSSEIPKGPTDGFGM 624
Query: 581 -----PDFVGPPH----RRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGA 631
P G PH + +V+P++L+ I GE+ + ++QIS A + + D KPG
Sbjct: 625 VSRNEPYGSGGPHFMGGTSMEMVIPQTLICHIYGENNNNIAHVQQISGAMLVVHDAKPGM 684
Query: 632 TETVIIISGTPEQTHAAQSLIQAFVM 657
+ +I+SGTP+Q AAQ L+ AF++
Sbjct: 685 FDGKVIMSGTPDQIRAAQRLVHAFIL 710
>gi|449448150|ref|XP_004141829.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 716
Score = 235 bits (599), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 216/686 (31%), Positives = 314/686 (45%), Gaps = 107/686 (15%)
Query: 41 SFPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDN 100
S P +FR+LCP SK+ + + + G I V+E + +E ++VI A
Sbjct: 63 SSPSDTLFRLLCPASKVSSI-------LRHLRDIPGARIHVDEPLPSCEECVLVILAGSP 115
Query: 101 KKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKAL 160
K N E E++ S SD DS E S+ Q+AL
Sbjct: 116 SKPAHTNPGNDREFREHDVHRNVS----SDTVAGDS--------------DERSQAQQAL 157
Query: 161 LLVFE---RMVEVEPETEVADQENTKSSK------------FVLRLLVLSTQVGCLLGKG 205
L FE RM E E + ++N S+ V RLL S QVG +LG+G
Sbjct: 158 LRTFESIVRMNEDSGENQEIQKKNADSAPNDRISGGETDGLVVCRLLAPSHQVGRVLGRG 217
Query: 206 GCVIKQI-------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPR 252
G +++I D+ P CA DE++QI+G V KAL +S L +SPR
Sbjct: 218 GKTVEKIRQESMAHVKIFPKDQNPACASPQDELIQISGNFSAVMKALSSVS-SCLQDSPR 276
Query: 253 --DHESIPGNPTGPSHPLPDHSVSSQGAP----YATGHRDVADIHLPMPPSIPKFHESGV 306
S GP+ SV + Y + H AD SIP +G
Sbjct: 277 VDSSNSSSTKSLGPTSHASSMSVQDEEPSPRRRYGSHHN--ADYRSRSYSSIPGHENAGA 334
Query: 307 LDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVI 366
R +++ FRLLC ++VG +IGKGG ++R+L+ ETG IK+++ ++RL+VI
Sbjct: 335 GPRAAMEEDVV-FRLLCQPDKVGSLIGKGGTVVRALQNETGASIKIVD-TPDLDERLVVI 392
Query: 367 SGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAE 426
S + S Q+AV+R RIA I V+ RLLV QIG L+G+GG II +
Sbjct: 393 SARETLEQTYSPAQEAVIRAHCRIAE-IGYEPGAAVVARLLVHGQQIGYLVGRGGHIIND 451
Query: 427 MRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFF--RDAFP 484
MR+ +G I+I +DQI ++EVV + G +VQ+ALF IT R+R FF R P
Sbjct: 452 MRRGTGTSIQIFPRDQIQNGGPMSDEVVQVIGNLPSVQDALFHITNRIRDTFFPMRPHVP 511
Query: 485 SINRPLNPTFLD--QVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHD 542
+ N +P +L +P P F PG Y + G PP HP D
Sbjct: 512 NFNN--HPPYLSPHPETPPPLFRPGSNAHSPGYYPSQAGGLR-----GTERPPYHSHPLD 564
Query: 543 DHSAFMHHI------HRPGMP-PH-----------MPDMKPWGPQGLMEV-GGPM-GF-- 580
A+ H++ + G+P PH P + W Q E+ GP GF
Sbjct: 565 HQPAYPHNVSFGGGNNMDGVPYPHGMERPGPGSFERPSPRSWTSQVSSEIPKGPTDGFGM 624
Query: 581 -----PDFVGPPH----RRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGA 631
P G PH + +V+P++L+ I GE+ + ++QIS A + + D KPG
Sbjct: 625 VSRNEPYGSGGPHFMGGTSMEMVIPQTLICHIYGENNNNIAHVQQISGAMLVVHDAKPGM 684
Query: 632 TETVIIISGTPEQTHAAQSLIQAFVM 657
+ +I+SGTP+Q AAQ L+ AF++
Sbjct: 685 FDGKVIMSGTPDQIRAAQRLVHAFIL 710
>gi|356531744|ref|XP_003534436.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 540
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 162/491 (32%), Positives = 250/491 (50%), Gaps = 78/491 (15%)
Query: 9 KRPHDDDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIMFRVLCPVSKIDGVIGKDGEMM 68
KR H +H++ + K+++ E+ S +FR LCPV KI VIG+ G+++
Sbjct: 10 KRSH---SHSDSDAGSKNKRRNPAADESSSSLITADDTVFRYLCPVRKIGSVIGRGGDIV 66
Query: 69 SQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASVADE 128
Q+ DT IR+ + + G DER+V I +S EE + DE
Sbjct: 67 KQLRADTKAKIRIGDALPGCDERVVTIHSSS---------------------EETNHFDE 105
Query: 129 SDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSKFV 188
+D+ S Q AL V +R++ + + ++ N ++K
Sbjct: 106 TDDL--------------------VSPAQDALFRVHQRVIAEDAREDEDEERNHVTAK-- 143
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQI-------------DKLPTCALASDEVVQITGEVDTV 235
LLV S Q+GC++GKGG +++ I D+LP CAL++DE+VQI+GE V
Sbjct: 144 --LLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDDRLPPCALSTDELVQISGEAAVV 201
Query: 236 RKALKLISHQLLDNSPRDH----ESIPGNPT--GPSHPLPDHSVSSQGAPYATGHRDVAD 289
+KAL I+ Q+ DN R ++PG GP P V+ Y D D
Sbjct: 202 KKALFQIAAQIRDNPSRSQHLLASAVPGGYATGGPGAGAPIMGVAPFVGAYGGYKGDTGD 261
Query: 290 IHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCD 349
+ P+ R + S + R +C +GGVIGKGGAII ++Q++G
Sbjct: 262 WSRSLYPA----------PRDEASMREFSVRFVCPTGNIGGVIGKGGAIINQIRQDSGAT 311
Query: 350 IKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIP-DNREQTVMTRLLV 408
IKV + + +D LI+IS +D S +A +R+Q R + + D+ + TRLLV
Sbjct: 312 IKVDSSATEGDDCLIIISTKEFFEDSFSPTIEAAVRLQPRCSEKVERDSGIVSFTTRLLV 371
Query: 409 ASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALF 468
+++IGCL+GKGG+I+ EMR+L+ A IRIL KD +PK ASE++E+V I+G+ + ++AL
Sbjct: 372 PTSRIGCLIGKGGTIVTEMRRLTKANIRILSKDNLPKIASEDDEMVQISGDLDVAKDALV 431
Query: 469 QITTRLRHHFF 479
Q TRLR + F
Sbjct: 432 QALTRLRANLF 442
>gi|449527609|ref|XP_004170802.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 546
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 177/494 (35%), Positives = 250/494 (50%), Gaps = 96/494 (19%)
Query: 19 EPNGKEKSQKLAGDYSENQPSKSFPGG------------IMFRVLCPVSKIDGVIGKDGE 66
+ N K DYSEN +K G ++R LCPV KI VIG+ GE
Sbjct: 4 QRNSYGKRNHSQSDYSENGGNKRRSHGEDRDQFVIDSEDTVYRYLCPVKKIGSVIGRGGE 63
Query: 67 MMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASVA 126
++ Q+ DT IR+ ETV GSDER++ I ++ N E N EE+S
Sbjct: 64 IVKQLRIDTKSKIRIGETVPGSDERVITIYSASN---------------ETNSLEESS-- 106
Query: 127 DESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSK 186
D V S Q+AL + +R+V + E D E +
Sbjct: 107 --------DYV----------------SPAQEALFKIHDRVVADDYMDE--DSEGG-GHQ 139
Query: 187 FVLRLLVLSTQVGCLLGKGGCVIKQI-------------DKLPTCALASDEVVQITGEVD 233
RLLV S Q+GC++GKGG +++ I D LP CAL+SDE+VQI+GE
Sbjct: 140 VTARLLVPSDQIGCIIGKGGQIVQNIRTETGAQVRILKDDHLPRCALSSDELVQISGEPL 199
Query: 234 TVRKALKLISHQLLDNSPRDH----ESIPG-NPTGPSHPLPDHSVSSQGAPYATGHRDVA 288
V+KAL I+ +L DN R +IPG +G S P H GAP
Sbjct: 200 IVKKALYQIASRLHDNPSRSQHLLASAIPGVYSSGGSLMAPTH-----GAPI-------- 246
Query: 289 DIHLPMPPSIPKFHESGVLDRPKP--SPEILTFRLLCHDERVGGVIGKGGAIIRSLKQET 346
+ + P + + G P+ S + + RL+C E +GGVIGKGGAII ++QET
Sbjct: 247 ---MGLAPLVSPY---GGYKAPREDLSSKEFSLRLICPTENIGGVIGKGGAIINQIRQET 300
Query: 347 GCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIP-DNREQTVMTR 405
IKV + + +D LI IS +D S +A LR+Q R + + D+ + TR
Sbjct: 301 KAAIKVDSSATEGDDCLINISSKEFFEDSYSPTLEAALRLQPRCSEKVERDSGIISFTTR 360
Query: 406 LLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQE 465
LLV +++IGCL+GKGG+II E+R+L+ A IRIL K+ +PK A E++E+V I+G+ + +E
Sbjct: 361 LLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDEMVQISGDLDVAKE 420
Query: 466 ALFQITTRLRHHFF 479
AL I TRLR + F
Sbjct: 421 ALVHIVTRLRANLF 434
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 110/190 (57%), Gaps = 18/190 (9%)
Query: 315 EILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAH--- 371
E +R LC +++G VIG+GG I++ L+ +T I++ E V G+++R+I I ++
Sbjct: 41 EDTVYRYLCPVKKIGSVIGRGGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNETN 100
Query: 372 ----PDDRISAPQDAVLRVQTRIAR--AIPDNRE---QTVMTRLLVASNQIGCLLGKGGS 422
D +S Q+A+ ++ R+ + ++ E V RLLV S+QIGC++GKGG
Sbjct: 101 SLEESSDYVSPAQEALFKIHDRVVADDYMDEDSEGGGHQVTARLLVPSDQIGCIIGKGGQ 160
Query: 423 IIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLR------H 476
I+ +R +GA +RIL D +P+CA ++E+V I+GE V++AL+QI +RL
Sbjct: 161 IVQNIRTETGAQVRILKDDHLPRCALSSDELVQISGEPLIVKKALYQIASRLHDNPSRSQ 220
Query: 477 HFFRDAFPSI 486
H A P +
Sbjct: 221 HLLASAIPGV 230
>gi|449447377|ref|XP_004141445.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 545
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 177/494 (35%), Positives = 250/494 (50%), Gaps = 96/494 (19%)
Query: 19 EPNGKEKSQKLAGDYSENQPSKSFPGG------------IMFRVLCPVSKIDGVIGKDGE 66
+ N K DYSEN +K G ++R LCPV KI VIG+ GE
Sbjct: 4 QRNSYGKRNHSQSDYSENGGNKRRSHGEDRDQFVIDSEDTVYRYLCPVKKIGSVIGRGGE 63
Query: 67 MMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASVA 126
++ Q+ DT IR+ ETV GSDER++ I ++ N E N EE+S
Sbjct: 64 IVKQLRIDTKSKIRIGETVPGSDERVITIYSASN---------------ETNSLEESS-- 106
Query: 127 DESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSK 186
D V S Q+AL + +R+V + E D E +
Sbjct: 107 --------DYV----------------SPAQEALFKIHDRVVADDYMDE--DSEGG-GHQ 139
Query: 187 FVLRLLVLSTQVGCLLGKGGCVIKQI-------------DKLPTCALASDEVVQITGEVD 233
RLLV S Q+GC++GKGG +++ I D LP CAL+SDE+VQI+GE
Sbjct: 140 VTARLLVPSDQIGCIIGKGGQIVQNIRTETGAQVRILKDDHLPRCALSSDELVQISGEPL 199
Query: 234 TVRKALKLISHQLLDNSPRDH----ESIPG-NPTGPSHPLPDHSVSSQGAPYATGHRDVA 288
V+KAL I+ +L DN R +IPG +G S P H GAP
Sbjct: 200 IVKKALYQIASRLHDNPSRSQHLLASAIPGVYSSGGSLMAPTH-----GAPI-------- 246
Query: 289 DIHLPMPPSIPKFHESGVLDRPKP--SPEILTFRLLCHDERVGGVIGKGGAIIRSLKQET 346
+ + P + + G P+ S + + RL+C E +GGVIGKGGAII ++QET
Sbjct: 247 ---MGLAPLVSPY---GGYKAPREDLSSKEFSLRLICPTENIGGVIGKGGAIINQIRQET 300
Query: 347 GCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIP-DNREQTVMTR 405
IKV + + +D LI IS +D S +A LR+Q R + + D+ + TR
Sbjct: 301 KAAIKVDSSATEGDDCLINISSKEFFEDSYSPTLEAALRLQPRCSEKVERDSGIISFTTR 360
Query: 406 LLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQE 465
LLV +++IGCL+GKGG+II E+R+L+ A IRIL K+ +PK A E++E+V I+G+ + +E
Sbjct: 361 LLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDEMVQISGDLDVAKE 420
Query: 466 ALFQITTRLRHHFF 479
AL I TRLR + F
Sbjct: 421 ALVHIVTRLRANLF 434
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 110/190 (57%), Gaps = 18/190 (9%)
Query: 315 EILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAH--- 371
E +R LC +++G VIG+GG I++ L+ +T I++ E V G+++R+I I ++
Sbjct: 41 EDTVYRYLCPVKKIGSVIGRGGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNETN 100
Query: 372 ----PDDRISAPQDAVLRVQTRIAR--AIPDNRE---QTVMTRLLVASNQIGCLLGKGGS 422
D +S Q+A+ ++ R+ + ++ E V RLLV S+QIGC++GKGG
Sbjct: 101 SLEESSDYVSPAQEALFKIHDRVVADDYMDEDSEGGGHQVTARLLVPSDQIGCIIGKGGQ 160
Query: 423 IIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLR------H 476
I+ +R +GA +RIL D +P+CA ++E+V I+GE V++AL+QI +RL
Sbjct: 161 IVQNIRTETGAQVRILKDDHLPRCALSSDELVQISGEPLIVKKALYQIASRLHDNPSRSQ 220
Query: 477 HFFRDAFPSI 486
H A P +
Sbjct: 221 HLLASAIPGV 230
>gi|8809595|dbj|BAA97146.1| RNA-binding protein-like [Arabidopsis thaliana]
Length = 660
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 198/662 (29%), Positives = 300/662 (45%), Gaps = 113/662 (17%)
Query: 38 PSKSFP---GGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVV 94
PSKS P +R+LC +K GVIGK G ++ I Q TG I V E V G ER +
Sbjct: 57 PSKSHPETMATTTYRILCHDAKAGGVIGKSGTIIKSIRQHTGAWINVHELVPGDAER--I 114
Query: 95 IEASDNKKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETS 154
IE SDN+ R + +GR + S
Sbjct: 115 IEISDNR------------RRDPDGRMPS-----------------------------FS 133
Query: 155 KVQKALLLVFERMVEVEP----------ETEVADQENTKSSKFVLRLLVLSTQVGCLLGK 204
Q+AL V +R++E E E E + V RL+V VGCLLGK
Sbjct: 134 PAQEALFSVHDRILESEAQFGYGGPPPEEEEDYGGVRPGGGRVVTRLVVSRMHVGCLLGK 193
Query: 205 GGCVIKQI--------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNS 250
GG +I+Q+ LP C S+E+VQI GE++ V+ AL ++S +L ++
Sbjct: 194 GGKIIEQMRIETKTHIRILPRESNLPRCVSLSEEIVQIVGELNAVKNALAIVSSRLRESQ 253
Query: 251 PRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRP 310
RD N G SH P+ S ++ G Y R + P S +
Sbjct: 254 HRDR----SNFQGRSHS-PERSFAAAGDDYMPQLRRQSSDRFPRGNFRNNNFSSRQSNYA 308
Query: 311 KPSPEI----------LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTE 360
+ +P + L F++LC +++ V+G+ II L+ E G D++V + V+G++
Sbjct: 309 EEAPAVPVGENVYSEELVFQILCPADKIVRVVGESQGIIDLLQNEIGVDVRVSDPVAGSD 368
Query: 361 DRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKG 420
+++I IS PDD Q+A+L +QT+I IPD ++ + TRLLV S CL GK
Sbjct: 369 EQIITISSEEAPDDPFFPAQEALLHIQTQIIDLIPD-KDNLITTRLLVPSRDSICLEGKA 427
Query: 421 GSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFR 480
GS ++E+ +L+G ++IL +++IP+CAS N+ V+ I GE A +EAL ++T LR H F+
Sbjct: 428 GS-VSEISRLTGTSVQILAREEIPRCASINDVVIQITGEIRAAREALVELTLLLRSHMFK 486
Query: 481 DAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPG--MYSNFGPSFHKFDAVGGPPPPGSF 538
+ + P P G E++ + S GP+ + F
Sbjct: 487 ELS---QKETPPASTSTTGPLEGVAGVMEVASSNNTIQSREGPTSSNLNLQQVSTILPQF 543
Query: 539 HPHDDHSAFM-HHIHRPGMPPHMPDMK-PWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVP 596
A HR +P M P + +EV V+P
Sbjct: 544 KEGFGSVAKAGESEHREEVPVTTSRMAVPLVTRSTLEV-------------------VLP 584
Query: 597 RSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFV 656
++VP + + L QI + S A +TI + +P T+ +I ISGTPEQ AQSL+Q F+
Sbjct: 585 EAVVPKLVTKSRNKLAQISEWSGASVTIVEDRPEETQNIIRISGTPEQAERAQSLLQGFI 644
Query: 657 MS 658
+S
Sbjct: 645 LS 646
Score = 46.2 bits (108), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 32 DYSENQPS-----KSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVS 86
+Y+E P+ + ++F++LCP KI V+G+ ++ + + GV +RV + V+
Sbjct: 306 NYAEEAPAVPVGENVYSEELVFQILCPADKIVRVVGESQGIIDLLQNEIGVDVRVSDPVA 365
Query: 87 GSDERLVVIEASD 99
GSDE+++ I + +
Sbjct: 366 GSDEQIITISSEE 378
>gi|30696273|ref|NP_200118.3| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|17065220|gb|AAL32764.1| RNA-binding protein-like [Arabidopsis thaliana]
gi|30725478|gb|AAP37761.1| At5g53060 [Arabidopsis thaliana]
gi|332008915|gb|AED96298.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 652
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 198/662 (29%), Positives = 300/662 (45%), Gaps = 113/662 (17%)
Query: 38 PSKSFP---GGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVV 94
PSKS P +R+LC +K GVIGK G ++ I Q TG I V E V G ER +
Sbjct: 57 PSKSHPETMATTTYRILCHDAKAGGVIGKSGTIIKSIRQHTGAWINVHELVPGDAER--I 114
Query: 95 IEASDNKKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETS 154
IE SDN+ R + +GR + S
Sbjct: 115 IEISDNR------------RRDPDGRMPS-----------------------------FS 133
Query: 155 KVQKALLLVFERMVEVEP----------ETEVADQENTKSSKFVLRLLVLSTQVGCLLGK 204
Q+AL V +R++E E E E + V RL+V VGCLLGK
Sbjct: 134 PAQEALFSVHDRILESEAQFGYGGPPPEEEEDYGGVRPGGGRVVTRLVVSRMHVGCLLGK 193
Query: 205 GGCVIKQI--------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNS 250
GG +I+Q+ LP C S+E+VQI GE++ V+ AL ++S +L ++
Sbjct: 194 GGKIIEQMRIETKTHIRILPRESNLPRCVSLSEEIVQIVGELNAVKNALAIVSSRLRESQ 253
Query: 251 PRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRP 310
RD N G SH P+ S ++ G Y R + P S +
Sbjct: 254 HRDR----SNFQGRSHS-PERSFAAAGDDYMPQLRRQSSDRFPRGNFRNNNFSSRQSNYA 308
Query: 311 KPSPEI----------LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTE 360
+ +P + L F++LC +++ V+G+ II L+ E G D++V + V+G++
Sbjct: 309 EEAPAVPVGENVYSEELVFQILCPADKIVRVVGESQGIIDLLQNEIGVDVRVSDPVAGSD 368
Query: 361 DRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKG 420
+++I IS PDD Q+A+L +QT+I IPD ++ + TRLLV S CL GK
Sbjct: 369 EQIITISSEEAPDDPFFPAQEALLHIQTQIIDLIPD-KDNLITTRLLVPSRDSICLEGKA 427
Query: 421 GSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFR 480
GS ++E+ +L+G ++IL +++IP+CAS N+ V+ I GE A +EAL ++T LR H F+
Sbjct: 428 GS-VSEISRLTGTSVQILAREEIPRCASINDVVIQITGEIRAAREALVELTLLLRSHMFK 486
Query: 481 DAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPG--MYSNFGPSFHKFDAVGGPPPPGSF 538
+ + P P G E++ + S GP+ + F
Sbjct: 487 ELS---QKETPPASTSTTGPLEGVAGVMEVASSNNTIQSREGPTSSNLNLQQVSTILPQF 543
Query: 539 HPHDDHSAFM-HHIHRPGMPPHMPDMK-PWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVP 596
A HR +P M P + +EV V+P
Sbjct: 544 KEGFGSVAKAGESEHREEVPVTTSRMAVPLVTRSTLEV-------------------VLP 584
Query: 597 RSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFV 656
++VP + + L QI + S A +TI + +P T+ +I ISGTPEQ AQSL+Q F+
Sbjct: 585 EAVVPKLVTKSRNKLAQISEWSGASVTIVEDRPEETQNIIRISGTPEQAERAQSLLQGFI 644
Query: 657 MS 658
+S
Sbjct: 645 LS 646
Score = 46.2 bits (108), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 32 DYSENQPS-----KSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVS 86
+Y+E P+ + ++F++LCP KI V+G+ ++ + + GV +RV + V+
Sbjct: 306 NYAEEAPAVPVGENVYSEELVFQILCPADKIVRVVGESQGIIDLLQNEIGVDVRVSDPVA 365
Query: 87 GSDERLVVIEASD 99
GSDE+++ I + +
Sbjct: 366 GSDEQIITISSEE 378
>gi|449456987|ref|XP_004146230.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
gi|449517605|ref|XP_004165836.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 666
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 199/687 (28%), Positives = 304/687 (44%), Gaps = 158/687 (22%)
Query: 48 FRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSEN 107
+R+LC +K GVIGK G ++ I Q TG I V E V G +ER +IE SD ++ E
Sbjct: 62 YRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEER--IIEISDTRRRDPEG 119
Query: 108 LEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERM 167
S S Q+AL L+ ER+
Sbjct: 120 RMPSF-----------------------------------------SPAQEALFLIHERI 138
Query: 168 VEVE-----------PETEVAD-------QENTKSSKFVLRLLVLSTQVGCLLGKGGCVI 209
+E E PE E D + RL+V VGCLLGKGG +I
Sbjct: 139 LESEMSPGFNGMGYGPEDEEDDYGGVRGGGGGGCGGRVATRLVVSRMHVGCLLGKGGKII 198
Query: 210 KQI--------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHE 255
+Q+ LP C S+E+VQI G+ + V+KA+ ++S +L ++ RD
Sbjct: 199 EQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGDTNAVKKAIAIVSSRLRESQHRDRS 258
Query: 256 SIPGNPTGPSHPLP--DHSVSSQGAPYATGHRDVADIHLPMPPSIPKFH---------ES 304
G P P D V R P P + + +S
Sbjct: 259 HFHGRLHSPERIFPPEDDYVPHNARRLPMDGR-------PFRPRMSASNTRGNDYSSRQS 311
Query: 305 GVLDRPKPSP----------EILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVME 354
+ P +P E L F++LC E+V VIG+ II L+ + G DIKV +
Sbjct: 312 NFMVEPGAAPVNDNMMPFYGEDLVFKILCPIEKVDSVIGESNGIIELLRNDVGVDIKVSD 371
Query: 355 AVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIG 414
V+G+ +++++IS PDD + Q+A+L +QTRI +PD +E V TRLLV S+ IG
Sbjct: 372 PVTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPD-KENIVTTRLLVPSSDIG 430
Query: 415 CLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRL 474
CL G+ GS++ EM++L+GA + I+ ++ +P S +E+V I G+ +A ++AL ++T+RL
Sbjct: 431 CLEGRDGSLL-EMKRLTGANVHIVPREDLPMFVSGADELVQIIGDIKAARDALVELTSRL 489
Query: 475 RHHFFRDAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPP 534
R+ +++ F P QVS + + L SN + +
Sbjct: 490 RNCLYKEPFQKDASP-------QVSVQSTMVS---LGLEESSSNNNAAARE--------- 530
Query: 535 PGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWG-PQGLMEVGG----------------- 576
H +D ++ +++P+G Q L E GG
Sbjct: 531 ---VHSGNDSASTAFQ-----------NVQPFGTAQLLKETGGSSNETGTQNENDRREDL 576
Query: 577 PMGFPDFVGPPHRR--VPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATET 634
P G P R + VV+P VP + + L QI ++S A +T+ + +P T+
Sbjct: 577 PSGLNRIPVPLVTRSTLEVVIPEPAVPKLITKSKNKLAQISELSGANVTLVEDRPDVTQK 636
Query: 635 VIIISGTPEQTHAAQSLIQAFVMSETE 661
+I ISGTPEQ AQSL+Q F++S E
Sbjct: 637 IIQISGTPEQAERAQSLLQGFILSLQE 663
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 103/354 (29%), Positives = 160/354 (45%), Gaps = 62/354 (17%)
Query: 318 TFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAH--PDDR 375
T+R+LCHD + GGVIGK G+II+S++Q TG I V E V G E+R+I IS P+ R
Sbjct: 61 TYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGR 120
Query: 376 I---SAPQDAVLRVQTRIARAI-----------PDNREQTV---------------MTRL 406
+ S Q+A+ + RI + P++ E TRL
Sbjct: 121 MPSFSPAQEALFLIHERILESEMSPGFNGMGYGPEDEEDDYGGVRGGGGGGCGGRVATRL 180
Query: 407 LVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQ-IPKCASENEEVVLINGEFEAVQE 465
+V+ +GCLLGKGG II +MR + IRIL +D +P+C S +EE+V I G+ AV++
Sbjct: 181 VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGDTNAVKK 240
Query: 466 ALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHK 525
A+ +++RLR RD R +P + P ++ P F P
Sbjct: 241 AIAIVSSRLRESQHRDRSHFHGRLHSPERI--FPPEDDYVPHNARRLPMDGRPFRPRMSA 298
Query: 526 FDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVG 585
+ G +D S + + PG P +M P+ + L+
Sbjct: 299 SNTRG----------NDYSSRQSNFMVEPGAAPVNDNMMPFYGEDLV------------- 335
Query: 586 PPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIIS 639
++ P V + GE ++ +R I ++DP G+ E ++IIS
Sbjct: 336 -----FKILCPIEKVDSVIGESNGIIELLRNDVGVDIKVSDPVTGSNEQILIIS 384
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 97/213 (45%), Gaps = 69/213 (32%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
++F++LCP+ K+D VIG+ ++ + D GV I+V + V+GS+E++++I
Sbjct: 334 LVFKILCPIEKVDSVIGESNGIIELLRNDVGVDIKVSDPVTGSNEQILII---------- 383
Query: 106 ENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFE 165
S +EG + E Q+ALL +
Sbjct: 384 ------------------------------SSDEG--------PDDELFPAQEALLHIQT 405
Query: 166 RMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI------------D 213
R+V++ P D+EN ++ RLLV S+ +GCL G+ G +++ +
Sbjct: 406 RIVDLVP-----DKENIVTT----RLLVPSSDIGCLEGRDGSLLEMKRLTGANVHIVPRE 456
Query: 214 KLPTCALASDEVVQITGEVDTVRKALKLISHQL 246
LP +DE+VQI G++ R AL ++ +L
Sbjct: 457 DLPMFVSGADELVQIIGDIKAARDALVELTSRL 489
>gi|224141139|ref|XP_002323932.1| predicted protein [Populus trichocarpa]
gi|222866934|gb|EEF04065.1| predicted protein [Populus trichocarpa]
Length = 722
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 172/542 (31%), Positives = 267/542 (49%), Gaps = 106/542 (19%)
Query: 14 DDNHTEPNGKEKSQKLAGDYSENQPSKS-----FPGG-IMFRVLCPVSKIDGVIGKDGEM 67
D N PNG +++ S+ QPS S P G + FR+LC S+I GVIGK G +
Sbjct: 3 DPNPNYPNGSSANKR-----SKPQPSASAAPLPVPSGHVSFRLLCHASRIGGVIGKAGNI 57
Query: 68 MSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASVAD 127
+ + Q TG +R+E+ S S +R++ +
Sbjct: 58 IKGLQQQTGAKVRIEDAPSDSPDRVITVIGP----------------------------- 88
Query: 128 ESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETE-VADQENTKSSK 186
+ + +V+ + S E SK Q+AL+ VFER++EV E++ VAD
Sbjct: 89 ---------ITQSAVVFSRIESAVEVSKGQEALVRVFERILEVAAESDSVAD------GV 133
Query: 187 FVLRLLVLSTQVGCLLGKGGCVIKQI------------DKLPTCALASDEVVQITGEVDT 234
R+L + VG ++GKGG V+++I DKLP CA +++E+++I G+V
Sbjct: 134 VSCRMLAEVSSVGAVIGKGGKVVEKIRKDCGCRIKVLVDKLPDCAASNEEMIEIEGDVSA 193
Query: 235 VRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADI---H 291
V+K L +S L D P D + + P+ + S+S H V +
Sbjct: 194 VKKGLVAVSRCLQDCQPVDKTRVTN--SKPAEAVSRVSLSDVRVEIHPRHSAVLPTIAQN 251
Query: 292 LPMPPSIPKFHESGVLDRPKPS------------------------PEILTFRLLCHDER 327
+ P+IP+ H G+ PK S P+ L FR+LC +R
Sbjct: 252 SSVLPTIPQ-HSLGLPTIPKSSINYASRVHPLSLESDRVVTPDTNIPQQLVFRILCTTDR 310
Query: 328 VGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQ 387
+GGVIGKGG I+R+L+ ETG I V VS ++RLI ++ +P+ R SA Q ++ V
Sbjct: 311 IGGVIGKGGNIVRALQNETGAAISVGPTVSECDERLITVTASENPESRYSAAQKTIVLVF 370
Query: 388 TR-----IARAIP--DNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGK 440
+R I + + +R V RL+V+ +Q+GCLLGKGG+II+EMRK + IRI+
Sbjct: 371 SRAVESGIEKGLDPGSSRGSPVTARLVVSPSQVGCLLGKGGTIISEMRKATSTSIRIIVG 430
Query: 441 DQI-PKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVS 499
DQ PKC E + VV I+G+F V++A++ +T RLR + F + N + L ++S
Sbjct: 431 DQRNPKCVPETDHVVEISGDFVNVKDAIYHVTGRLRDNLFSGMLSTPGARSNSSVLAEIS 490
Query: 500 PF 501
P+
Sbjct: 491 PY 492
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 70/139 (50%), Gaps = 34/139 (24%)
Query: 543 DHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVP---------- 592
DH H + RP P + W Q + V P G D RR+P
Sbjct: 592 DHLGLSHSLDRP------PSPRLWASQTIPRVN-PRGISDV----SRRLPSLKAGLELGS 640
Query: 593 -------------VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIIS 639
+VVP + + GE+G+ L ++RQIS AK+ + +P+ G ++ +++IS
Sbjct: 641 GGKSAFVTNTTVEIVVPENAFGSVYGENGSNLARLRQISGAKVIVHEPRLGTSDRIVVIS 700
Query: 640 GTPEQTHAAQSLIQAFVMS 658
GTP++T AAQSL+QAF+++
Sbjct: 701 GTPDETQAAQSLLQAFILT 719
>gi|255561850|ref|XP_002521934.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223538859|gb|EEF40458.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 704
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 192/662 (29%), Positives = 307/662 (46%), Gaps = 153/662 (23%)
Query: 48 FRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSEN 107
+R+LC K GVIGK G ++ I Q TG I V E + G +ER +IE SD ++ E
Sbjct: 77 YRILCHDMKAGGVIGKSGTIIKSIRQHTGAWINVHELIPGDEER--IIEISDTRRRDPE- 133
Query: 108 LEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERM 167
GR A S Q+AL L+ +R+
Sbjct: 134 -----------GRMPA-----------------------------FSPAQEALFLIHDRI 153
Query: 168 VEVEPE--TEVADQE--------NTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI----- 212
+E + + A++E N +++ RL+V VGCLLGKGG +I+Q+
Sbjct: 154 LESDGQFGMSYANEEDEYGGRGINNSNNRVATRLVVSRMHVGCLLGKGGKIIEQMRIETK 213
Query: 213 ---------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRD--HESIPGNP 261
LP C S+E+VQ+ G+V+ V+ A+ +IS +L ++ RD H + G
Sbjct: 214 TQIRILPRDHTLPRCVSMSEEIVQVVGDVNAVKNAIAIISSRLRESQHRDRSHGNFHGRM 273
Query: 262 TGPSHPLPDHSVSSQGAPYA--TGHRDVADI-HLPMPPSIPKFHESG------------- 305
P PD P+ TG R D S P + S
Sbjct: 274 HSPERFFPDDDY----VPHMNNTGRRSSIDGPSFGSRASGPNYRNSNYSSRQYGYNVEAG 329
Query: 306 --VLDRPKP-SPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDR 362
V D +P + L FR+LC ++V V+G+ I+ L+ + G D+KV + VSG++++
Sbjct: 330 APVADSAQPFYGDDLVFRMLCPADKVNKVVGESDGILDLLQNDIGVDVKVSDPVSGSDEQ 389
Query: 363 LIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGS 422
+I+IS PDD + Q+A+L +QT I +PD+ + + T+L+V+S +IGCL G+ GS
Sbjct: 390 MIIISSEEGPDDELFPAQEALLHIQTHIIDLVPDS-DNIIKTKLIVSSGEIGCLEGRDGS 448
Query: 423 IIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFF--- 479
+ +EM +L+GA I+IL ++++P C SE +E+V I GE +A ++AL ++T+RLR + +
Sbjct: 449 L-SEMERLTGAKIQILPREKLPACVSEADELVQIEGEIKAARDALVEVTSRLRSYLYKEY 507
Query: 480 --RDAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGS 537
+D P I+ P L + P+ ++PP + GG PP +
Sbjct: 508 FQKDTPPPISVPSTGNALGMEAASPN-----NINPP-----------RDGHSGGEPPAAN 551
Query: 538 FHPHDDHSAFMHHIHRPGMPPHMPD-MKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVP 596
+ H + P + + W L + + F
Sbjct: 552 Y-----------HTPKTAAPIQLSKVIILW----LCRIFFLLHFS-------------FS 583
Query: 597 RSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFV 656
RS V ++ L + +S A +T+ + +P TE +I ISGTPEQ AQSL+Q F+
Sbjct: 584 RSYVQLL-------LSTV--LSGANVTLLEDRPEVTEKIIQISGTPEQVERAQSLLQGFI 634
Query: 657 MS 658
+S
Sbjct: 635 LS 636
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/269 (33%), Positives = 130/269 (48%), Gaps = 52/269 (19%)
Query: 318 TFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAH--PDDR 375
++R+LCHD + GGVIGK G II+S++Q TG I V E + G E+R+I IS P+ R
Sbjct: 76 SYRILCHDMKAGGVIGKSGTIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 135
Query: 376 ISA---PQDAVLRVQTRI-------------------ARAIPDNREQTVMTRLLVASNQI 413
+ A Q+A+ + RI R I +N V TRL+V+ +
Sbjct: 136 MPAFSPAQEALFLIHDRILESDGQFGMSYANEEDEYGGRGI-NNSNNRVATRLVVSRMHV 194
Query: 414 GCLLGKGGSIIAEMRKLSGAYIRILGKDQ-IPKCASENEEVVLINGEFEAVQEALFQITT 472
GCLLGKGG II +MR + IRIL +D +P+C S +EE+V + G+ AV+ A+ I++
Sbjct: 195 GCLLGKGGKIIEQMRIETKTQIRILPRDHTLPRCVSMSEEIVQVVGDVNAVKNAIAIISS 254
Query: 473 RLR-------------------HHFF--RDAFPSINRPLNPTFLDQVSPFPSFIGRRELS 511
RLR FF D P +N + +D PSF G R
Sbjct: 255 RLRESQHRDRSHGNFHGRMHSPERFFPDDDYVPHMNNTGRRSSIDG----PSF-GSRASG 309
Query: 512 PPGMYSNFGPSFHKFDAVGGPPPPGSFHP 540
P SN+ + ++ G P S P
Sbjct: 310 PNYRNSNYSSRQYGYNVEAGAPVADSAQP 338
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 95/213 (44%), Gaps = 69/213 (32%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
++FR+LCP K++ V+G+ ++ + D GV ++V + VSGSDE++++I
Sbjct: 344 LVFRMLCPADKVNKVVGESDGILDLLQNDIGVDVKVSDPVSGSDEQMIII---------- 393
Query: 106 ENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFE 165
S EG + E Q+ALL +
Sbjct: 394 ------------------------------SSEEG--------PDDELFPAQEALLHIQT 415
Query: 166 RMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIK---------QI---D 213
++++ P D +N +K L+V S ++GCL G+ G + + QI +
Sbjct: 416 HIIDLVP-----DSDNIIKTK----LIVSSGEIGCLEGRDGSLSEMERLTGAKIQILPRE 466
Query: 214 KLPTCALASDEVVQITGEVDTVRKALKLISHQL 246
KLP C +DE+VQI GE+ R AL ++ +L
Sbjct: 467 KLPACVSEADELVQIEGEIKAARDALVEVTSRL 499
>gi|302754958|ref|XP_002960903.1| hypothetical protein SELMODRAFT_73985 [Selaginella moellendorffii]
gi|300171842|gb|EFJ38442.1| hypothetical protein SELMODRAFT_73985 [Selaginella moellendorffii]
Length = 502
Score = 229 bits (584), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 171/488 (35%), Positives = 255/488 (52%), Gaps = 76/488 (15%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
+++R+LCP +KI VIGK G ++ + +TG I+V + + GSDER++ I
Sbjct: 46 VVYRILCPGAKIGSVIGKGGSIIKSLRNETGAKIKVADGIPGSDERVIFISPR------- 98
Query: 106 ENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFE 165
ER E R + E D KE + E + L Q+AL VF
Sbjct: 99 -------ERREGKPR---GGSKEMDKDKEQNGEESTPL----------PASQEALFKVFA 138
Query: 166 RMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI------------- 212
R+VE E D++ S RLLV S Q+GCLLGK G +I+Q+
Sbjct: 139 RIVE----GEEFDEDEDSSRNVTARLLVPSNQIGCLLGKAGKIIEQMRVESGAQIRVLPR 194
Query: 213 DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGN--PTGPSHPLPD 270
++LP CA +DE+ +TGE+ V+KAL IS +L DN PRD G+ P S LP
Sbjct: 195 EQLPKCAYHTDEL--LTGELALVKKALTTISTRLYDNPPRDKPPQAGHLGPFQESTILPG 252
Query: 271 HSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGG 330
++ GA + G+ +A P RLLC +E++G
Sbjct: 253 -TLLPPGAFFPQGNASIA-----------------------PVEGEFAVRLLCPNEKIGS 288
Query: 331 VIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRI 390
VIGKGG IIRS+++ET IK+ +AV+ E+R+I I+ +++S +AVL++Q+RI
Sbjct: 289 VIGKGGMIIRSIREETCARIKIADAVANAEERVIHITSNEVLHEQVSPALEAVLQLQSRI 348
Query: 391 ARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASEN 450
+ + ++ + TR LV S IGCLLGK GSIIA+MR+ + A IR+L K+ +PKCA E+
Sbjct: 349 SDPSAE-KDGAMTTRFLVPSANIGCLLGKKGSIIADMRRNTRANIRVLSKEALPKCAHED 407
Query: 451 EEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVS-PFPSFIGRRE 509
+E+V + G+ ++A+ +I TRLR + F + +++ NP Q S P S R
Sbjct: 408 DELVQVVGDITVARDAVIEIITRLRANIFSEHMKNVSS--NPGLGVQGSVPVSSTYEPRH 465
Query: 510 LSPPGMYS 517
PGM+S
Sbjct: 466 EPSPGMFS 473
>gi|414589867|tpg|DAA40438.1| TPA: hypothetical protein ZEAMMB73_485730 [Zea mays]
Length = 640
Score = 229 bits (583), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 175/522 (33%), Positives = 258/522 (49%), Gaps = 69/522 (13%)
Query: 178 DQENTKSSKFVLRLLVLSTQVGCLLGKGG---------C-----VIKQIDKLPTCALASD 223
++E + R+L QVGC+LGKGG C V + ++LP A D
Sbjct: 100 EEEREVTGAVGCRMLAAGWQVGCVLGKGGKTVERMRQECGAQIRVFRNREQLPPWAPPGD 159
Query: 224 EVVQITGEVDTVRKALKLISHQLLDNSPRDHESIP-GNPTGPSHPLPDHSVSSQGAPYAT 282
E++ I+G VRKAL +S L DN D +IP G P G LP S G P
Sbjct: 160 ELIHISGSFSQVRKALLAVSTCLQDNPRPDTHNIPIGRPFG----LPG---SGTGCPPGM 212
Query: 283 GHRDVADIHLPMPPSIPKFHESGV-LDRPKPSPEI-----LTFRLLCHDERVGGVIGKGG 336
D +PP IP +H + P P + FR++ +E VG +IGKGG
Sbjct: 213 ---DPHSQRSYLPPHIPDYHTRNYPSNAGPPGPRFFFEQEIVFRMIILNEMVGSIIGKGG 269
Query: 337 AIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPD 396
+ IR+L+ ETG IK++E V+ +++R++ I+ + D S QDAV+RV +RI+ A D
Sbjct: 270 STIRALQSETGACIKILEPVADSDERVVAITARENSDMLHSPAQDAVVRVYSRISEASID 329
Query: 397 NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLI 456
T RLLV S IGCLLGKGGSII+EMRK++GA IRI G +QIP+CA N+E+V +
Sbjct: 330 RSSHTP-ARLLVPSQHIGCLLGKGGSIISEMRKITGANIRIFGNEQIPRCAQRNDEMVQV 388
Query: 457 NGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMY 516
G F+++Q+AL IT R+R PS P P V P R+E PP ++
Sbjct: 389 TGSFQSIQDALLHITGRIRDVILPKPHPSGGMPPYPP----VGNIPVHQSRQEQPPPHLH 444
Query: 517 SNFG-PSF--HKF--DAVGG--------PPPPGSF-HPHDDHSAFMHHIHRPG------- 555
+ G P + H F DA G PPP S + D +++ + + G
Sbjct: 445 PSGGMPPYPMHPFRPDAPMGHFEMGDHRPPPVHSMEYMGADRMPYLYGVEQGGPRPFLEQ 504
Query: 556 -----MPPHMPDMKPWGPQGLMEV-------GGPMGFPDFVGPPHRRVPVVVPRSLVPII 603
PP P P+ + + GP+ + V P V++P + + +
Sbjct: 505 PSPRTCPPEAPRTNSEVPRNMSDAVPATDFRKGPVAIENQVATPTGTTEVIIPCNYIGFV 564
Query: 604 QGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQT 645
G +G+ +++I ++S A IT+ DPK G + ++I G P +
Sbjct: 565 CGNNGSEIEEIEKMSGASITVHDPKAGDANSKVVICGDPRRN 606
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 115/488 (23%), Positives = 188/488 (38%), Gaps = 137/488 (28%)
Query: 7 PSKRPHDDDNHTEPNGKEKSQKLAGDYSENQPSKSFPGG--------IMFRVLCPVSKID 58
P PH ++ P+ + ++ N PS + P G I+FR++ +
Sbjct: 210 PGMDPHSQRSYLPPH-------IPDYHTRNYPSNAGPPGPRFFFEQEIVFRMIILNEMVG 262
Query: 59 GVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENN 118
+IGK G + + +TG I++ E V+ SDER+V I A +
Sbjct: 263 SIIGKGGSTIRALQSETGACIKILEPVADSDERVVAITARE------------------- 303
Query: 119 GREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVAD 178
NS+ S Q A++ V+ R+ E +
Sbjct: 304 -----------------------------NSDMLHSPAQDAVVRVYSRISEASID----- 329
Query: 179 QENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDK-------------LPTCALASDEV 225
+SS RLLV S +GCLLGKGG +I ++ K +P CA +DE+
Sbjct: 330 ----RSSHTPARLLVPSQHIGCLLGKGGSIISEMRKITGANIRIFGNEQIPRCAQRNDEM 385
Query: 226 VQITGEVDTVRKALKLISHQLLDN-SPRDHESIPGNPTGPSHPLPDHSVSSQGAP---YA 281
VQ+TG +++ AL I+ ++ D P+ H S P P +P H + P +
Sbjct: 386 VQVTGSFQSIQDALLHITGRIRDVILPKPHPSGGMPPYPPVGNIPVHQSRQEQPPPHLHP 445
Query: 282 TGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRS 341
+G +H P P P H RP P + + + D R+ + G R
Sbjct: 446 SGGMPPYPMH-PFRPDAPMGHFEMGDHRPPP---VHSMEYMGAD-RMPYLYGVEQGGPRP 500
Query: 342 LKQE------------TGCDI--KVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQ 387
++ T ++ + +AV T+ R GP +++++ P
Sbjct: 501 FLEQPSPRTCPPEAPRTNSEVPRNMSDAVPATDFR----KGPVAIENQVATP-------- 548
Query: 388 TRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCA 447
T T +++ N IG + G GS I E+ K+SGA I + PK
Sbjct: 549 -------------TGTTEVIIPCNYIGFVCGNNGSEIEEIEKMSGASITV----HDPKAG 591
Query: 448 SENEEVVL 455
N +VV+
Sbjct: 592 DANSKVVI 599
>gi|148905782|gb|ABR16055.1| unknown [Picea sitchensis]
Length = 650
Score = 229 bits (583), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 188/549 (34%), Positives = 285/549 (51%), Gaps = 74/549 (13%)
Query: 156 VQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI--- 212
Q LL V +V+ E+ D + K RLLV ++Q+G L+GKGG I+++
Sbjct: 117 AQDGLLRVHSVIVQ---ESSGKDNDADKKRPQDARLLVANSQIGSLIGKGGNNIQKLRSE 173
Query: 213 ----------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPR---------- 252
D+LP CA + DE+V I+G+ V+KAL +S L + P+
Sbjct: 174 SGAQIQIPRKDELPGCAFSFDELVVISGDAAAVKKALYAVSAFLFKHPPKEQIPWSVILP 233
Query: 253 --DHESIP--GNPTGP-SHPLPD-------HSVSSQGAPYAT------GHRDVADIHLPM 294
+ S+P G PT P ++ LP H++S+ YA+ G+ A P+
Sbjct: 234 ETNQSSLPPSGVPTFPPANYLPQGDSLFGHHNLSAPILGYASRLPGLGGYGSEAGSAWPL 293
Query: 295 P-PSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVM 353
P++P F + G K S E + R+LC ++++GGVIGKGG I+S++ +TG I+V
Sbjct: 294 SNPALPSFSKFGNSTTKKTSEE-FSIRVLCPNDKIGGVIGKGGNTIKSMRNDTGASIRVE 352
Query: 354 EAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQI 413
+A + +++R+IV+S DDR+S +AVL +Q + + +++ + TR LV S I
Sbjct: 353 DAQTESDERVIVVSATELADDRVSPTIEAVLLLQGKTSGTT--DKDGAISTRFLVPSKHI 410
Query: 414 GCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTR 473
GCLLGKGG+II+EMRK + A IRI KD+ P C SENEE+V + GE ++AL QI R
Sbjct: 411 GCLLGKGGNIISEMRKQTRANIRIFRKDERPICVSENEELVQVTGEPGVAKDALIQILKR 470
Query: 474 LRHHFFRDAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPG---MYSNFGPSFHKFDAVG 530
LR + F+D + N D V P S LS P + S++G K+D V
Sbjct: 471 LRENIFKDKDGASN-------TDSVLPLSS------LSVPSAVPLSSSYGT--RKYDIVS 515
Query: 531 GPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMG-FPDFVGPPHR 589
P G+ + G + ++P+ P +G G + P H
Sbjct: 516 ---PRGAIAGRSAAGLSGFGALQAGTGSYA-SLQPYAPTRTFGIGLSGGHLNSSLAPSHE 571
Query: 590 RVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQ 649
+P S V + G G+ + IR+IS A + + DP GA++ V+ ISGTPEQ+HAAQ
Sbjct: 572 ---FAIPNSAVSSVLGRGGSNISHIREISGATVKLRDPITGASDRVVEISGTPEQSHAAQ 628
Query: 650 SLIQAFVMS 658
SLIQAF+++
Sbjct: 629 SLIQAFMLT 637
>gi|297792661|ref|XP_002864215.1| hypothetical protein ARALYDRAFT_495374 [Arabidopsis lyrata subsp.
lyrata]
gi|297310050|gb|EFH40474.1| hypothetical protein ARALYDRAFT_495374 [Arabidopsis lyrata subsp.
lyrata]
Length = 652
Score = 228 bits (582), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 197/673 (29%), Positives = 304/673 (45%), Gaps = 136/673 (20%)
Query: 38 PSKSFP---GGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVV 94
PSKS P +R+LC +K GVIGK G ++ I Q TG I V E V G ER +
Sbjct: 58 PSKSHPETMATTTYRILCHDAKAGGVIGKSGTIIKSIRQHTGAWINVHELVPGDVER--I 115
Query: 95 IEASDNKKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETS 154
IE SDN+ R + +GR + S
Sbjct: 116 IEISDNR------------RRDPDGRMPS-----------------------------FS 134
Query: 155 KVQKALLLVFERMVEVEP----------ETEVADQENTKSSKFVLRLLVLSTQVGCLLGK 204
Q+AL V +R++E EP E E + V RL+V VGCLLGK
Sbjct: 135 PAQEALFNVHDRILESEPQFGYGGAQPEEEEDYGGVRPGGGRVVTRLVVSRMHVGCLLGK 194
Query: 205 GGCVIKQI--------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNS 250
GG +I+Q+ LP C S+E+VQI GE+ V+ AL ++S +L ++
Sbjct: 195 GGKIIEQMRIETKTHIRILPRESNLPRCVSLSEEIVQIVGELSAVKNALLIVSSRLRESQ 254
Query: 251 PRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRP 310
RD N G SH P+ ++ G Y R +D P S +
Sbjct: 255 HRDR----SNFQGRSHS-PERQFAAAGDDYIPQRRQSSD-RFPRGNYRNNNFSSRQSNYA 308
Query: 311 KPSPEI----------LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTE 360
+ +P + L F++LC +++ V+G+ I+ L+ E G D++V + V+G++
Sbjct: 309 EEAPAVPVGENVYTEELVFQILCPADKIVRVVGESQGILDLLQNEIGVDVRVSDPVTGSD 368
Query: 361 DRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKG 420
+++I IS PDD Q+A+L +QT+I +PD ++ + TRLLV+S CL GK
Sbjct: 369 EQIITISSEEAPDDPFFPAQEALLHIQTQIIDLLPD-KDNLITTRLLVSSRDSVCLEGKA 427
Query: 421 GSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFR 480
GS ++E+ +L+G ++IL +++IP+CAS N+ V+ I G+ A ++AL ++T LR H F+
Sbjct: 428 GS-VSEISRLTGTSVQILAREEIPRCASINDVVIQITGDIRAARDALVELTLLLRSHMFK 486
Query: 481 D--------AFPSINRPLNPT--FLDQVSPFPSFIGRRELSPPGM----YSNFGPSFHKF 526
+ A S PL ++ S + R L+ + S P F
Sbjct: 487 ELSQKETPPASTSTTGPLEGVAGVMEVASSNNTIQSREGLTGSNLKLQQTSTILPQFK-- 544
Query: 527 DAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMK-PWGPQGLMEVGGPMGFPDFVG 585
+ G G HR +P M P + +EV
Sbjct: 545 EGFGSVAKAGESE------------HREEVPVTTSRMAVPLVTRSTLEV----------- 581
Query: 586 PPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQT 645
V+P ++VP + + L QI + S A +T+ + +P T+ +I ISGTPEQ
Sbjct: 582 --------VLPEAVVPKLVTKSRNKLAQISEWSGASVTLVEDRPEETQNIIRISGTPEQA 633
Query: 646 HAAQSLIQAFVMS 658
AQSL+Q F++S
Sbjct: 634 ERAQSLLQGFILS 646
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 48/88 (54%), Gaps = 8/88 (9%)
Query: 20 PNGKEKSQKLAG---DYSENQPS-----KSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQI 71
P G ++ + +Y+E P+ + ++F++LCP KI V+G+ ++ +
Sbjct: 291 PRGNYRNNNFSSRQSNYAEEAPAVPVGENVYTEELVFQILCPADKIVRVVGESQGILDLL 350
Query: 72 SQDTGVTIRVEETVSGSDERLVVIEASD 99
+ GV +RV + V+GSDE+++ I + +
Sbjct: 351 QNEIGVDVRVSDPVTGSDEQIITISSEE 378
>gi|224118310|ref|XP_002317787.1| predicted protein [Populus trichocarpa]
gi|222858460|gb|EEE96007.1| predicted protein [Populus trichocarpa]
Length = 655
Score = 228 bits (582), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 192/671 (28%), Positives = 298/671 (44%), Gaps = 137/671 (20%)
Query: 48 FRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSEN 107
+R+LC K GVIGK G ++ I Q TG I V E + G +ER +IE SD ++ E
Sbjct: 62 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEER--IIEISDTRRRDPEG 119
Query: 108 LEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERM 167
S S Q+AL L+ +R+
Sbjct: 120 RMPSF-----------------------------------------SPAQEALFLIHDRI 138
Query: 168 VEVEPETEVA----------DQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI----- 212
+E + + V + ++ RL+V VGCLLGKGG +I+Q+
Sbjct: 139 LENDLQYGVVSSGVGGLEEDEYVGRGGNRVATRLVVSRMHVGCLLGKGGKIIEQMRMETK 198
Query: 213 ---------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTG 263
LP C S+E+VQ+ G+V V+ A+ +IS +L ++ RD G
Sbjct: 199 TQIRILPRDHTLPRCVSMSEEIVQVVGDVSAVKNAVAIISSRLRESQHRDRSHFHGRVHS 258
Query: 264 PSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPS----IP---------KFHESG----- 305
P D AP+ R D PPS +P SG
Sbjct: 259 PERLFDDDY-----APHMNTRRSSMD----GPPSFGSRVPGSNYRNNNYSSRASGFAADA 309
Query: 306 ----VLDRPKP-SPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTE 360
+ D +P E L FR+LC +++ V+G+ I+ L+ E G D+KV + VSG++
Sbjct: 310 GADPIADSAQPFYVEDLVFRILCPIDKLNRVVGESDGIVDLLQNEIGVDVKVADPVSGSD 369
Query: 361 DRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKG 420
+++I I PDD + Q+A+L +QTRI +PDN + TRLLV S++IGCL G+
Sbjct: 370 EQIITIFSEEGPDDELFPAQEALLHIQTRIVDLVPDN-DHITTTRLLVRSSEIGCLEGRD 428
Query: 421 GSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFR 480
S ++E+ +L+GA I IL K+++P S +E+V I GE A ++AL ++T+RLR + ++
Sbjct: 429 AS-LSEIERLTGATIEILPKEKLPSYLSGIDEIVQIEGEIRAARDALVEVTSRLRSYIYK 487
Query: 481 DAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHP 540
D F + L P P G + + P P+ + +GG PP
Sbjct: 488 DVF---EKDLPPPV-----SAPGLAGGMQAASP------SPTPAREGPIGGDPP------ 527
Query: 541 HDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVP-------- 592
A ++ P D + + + + + R+P
Sbjct: 528 -----ASYQNVQSAATPQPSKDARGSSVEAVKQ-NESERREELPVTTMNRIPVTLVTRST 581
Query: 593 --VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQS 650
VV+P VP + + L QI ++S A +T+ + +P E +I ISGTPEQ AQS
Sbjct: 582 LEVVIPEPAVPKLITKSKNKLAQISELSGANVTLVEDRPDVKEKIIKISGTPEQAERAQS 641
Query: 651 LIQAFVMSETE 661
L+Q F++S E
Sbjct: 642 LLQGFILSTQE 652
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 107/188 (56%), Gaps = 24/188 (12%)
Query: 318 TFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAH--PDDR 375
++R+LCHD + GGVIGK G+II+S++Q TG I V E + G E+R+I IS P+ R
Sbjct: 61 SYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 120
Query: 376 I---SAPQDAVLRVQTRI----------ARAIPDNRE--------QTVMTRLLVASNQIG 414
+ S Q+A+ + RI + + E V TRL+V+ +G
Sbjct: 121 MPSFSPAQEALFLIHDRILENDLQYGVVSSGVGGLEEDEYVGRGGNRVATRLVVSRMHVG 180
Query: 415 CLLGKGGSIIAEMRKLSGAYIRILGKDQ-IPKCASENEEVVLINGEFEAVQEALFQITTR 473
CLLGKGG II +MR + IRIL +D +P+C S +EE+V + G+ AV+ A+ I++R
Sbjct: 181 CLLGKGGKIIEQMRMETKTQIRILPRDHTLPRCVSMSEEIVQVVGDVSAVKNAVAIISSR 240
Query: 474 LRHHFFRD 481
LR RD
Sbjct: 241 LRESQHRD 248
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 106/247 (42%), Gaps = 73/247 (29%)
Query: 16 NHTEPNGKEKSQKLAGDYSENQPSKS----FPGGIMFRVLCPVSKIDGVIGKDGEMMSQI 71
N+ N ++ A D + + S + ++FR+LCP+ K++ V+G+ ++ +
Sbjct: 292 NYRNNNYSSRASGFAADAGADPIADSAQPFYVEDLVFRILCPIDKLNRVVGESDGIVDLL 351
Query: 72 SQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASVADESDN 131
+ GV ++V + VSGSDE+++ I + +
Sbjct: 352 QNEIGVDVKVADPVSGSDEQIITIFSEEGP------------------------------ 381
Query: 132 KKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRL 191
+ E Q+ALL + R+V++ P D ++ ++ RL
Sbjct: 382 ------------------DDELFPAQEALLHIQTRIVDLVP-----DNDHITTT----RL 414
Query: 192 LVLSTQVGCLLGKG----------GCVIKQI--DKLPTCALASDEVVQITGEVDTVRKAL 239
LV S+++GCL G+ G I+ + +KLP+ DE+VQI GE+ R AL
Sbjct: 415 LVRSSEIGCLEGRDASLSEIERLTGATIEILPKEKLPSYLSGIDEIVQIEGEIRAARDAL 474
Query: 240 KLISHQL 246
++ +L
Sbjct: 475 VEVTSRL 481
>gi|224095794|ref|XP_002310483.1| predicted protein [Populus trichocarpa]
gi|222853386|gb|EEE90933.1| predicted protein [Populus trichocarpa]
Length = 747
Score = 228 bits (581), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 176/538 (32%), Positives = 270/538 (50%), Gaps = 87/538 (16%)
Query: 7 PSKRP-HDDDNHTEPNGKEKSQKLAGDYSENQPSKSFP------GGIMFRVLCPVSKIDG 59
P+KRP + +PN + A S+ PS S G ++FR+LC S+I G
Sbjct: 12 PAKRPVYYSTILPDPNPNSTNGYSANKRSKPHPSTSAAPSPVPSGHVLFRLLCHDSRIGG 71
Query: 60 VIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNG 119
+IGK G ++ + Q TG IR+E+ S +R++ I S
Sbjct: 72 IIGKGGNIIKGLQQQTGAKIRIEDAPLESPDRVITIVGS--------------------- 110
Query: 120 REEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQ 179
V + SV+ G+ S E SK Q+AL+ VFER++EV A+
Sbjct: 111 -----------------VTQSSVVFSGIGSAIEVSKGQEALVRVFERILEV-----AAES 148
Query: 180 ENTKSSKFVLRLLVLSTQVGCLLGKGG-----------CVIK-QIDKLPTCALASDEVVQ 227
++ RLL + VG ++GKGG C +K IDKLP CA +++E+++
Sbjct: 149 DSVAGGLVSCRLLAEISSVGAVIGKGGKTVEKIRKDCGCKVKVLIDKLPACASSNEEMIE 208
Query: 228 ITGEVDTVRKALKLISHQLLDNSPRDHES-IPGNPTGPSHPLPDHSVSSQGAPYATGHRD 286
I G+V V+K L +SH+L D P D I P + V + P + R
Sbjct: 209 IEGDVSAVKKGLVAVSHRLQDCQPVDKTRVISSKPVEAVSRVSFPEVGVEILPQHSAVRP 268
Query: 287 VADIHLPMPPSIPKF---HESGV------------LDRPKPSPEILTFRLLCHDERVGGV 331
H PP++ + SG LD P +++ FR+LC+++RVGGV
Sbjct: 269 TIAQHSVAPPTVTNSSIDYASGTHLFSLESERVSTLDTSTPQQQVV-FRILCNNDRVGGV 327
Query: 332 IGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIA 391
IGKGG I+ +L+ ETG I + V+G ++RLI ++ +P+ R SA Q V+ V +R+
Sbjct: 328 IGKGGNIVTALQNETGATISIGPKVAGCDERLITVTASENPESRYSAAQKTVVLVFSRVV 387
Query: 392 RAI------PDNREQT-VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQ-I 443
++ P + E + V RL+V+ NQ+GCLLGKGG+II+EMRK + IRI+G+DQ
Sbjct: 388 ESVIEKGLDPGSSEGSPVSVRLVVSPNQVGCLLGKGGTIISEMRKATSTSIRIIGRDQGN 447
Query: 444 PKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSPF 501
PKC EN+ VV I G+F V+++++ IT RLR + F + + + L + SP+
Sbjct: 448 PKCVPENDHVVEILGDFLNVKDSIYHITGRLRDNLFSSILGTPGARSSSSVLAETSPY 505
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 70/135 (51%), Gaps = 25/135 (18%)
Query: 543 DHSAFMHHIHRPGMPPHMPDMKPWG--------PQGLMEVGGPM-----GFPDFVGP--- 586
DH F + H P + WG P+G+ ++ G + G D V
Sbjct: 616 DHLGFSRSLD------HSPSPRLWGSQTIPGVNPRGISDLSGGLPSFKAGLDDLVSGGKS 669
Query: 587 ---PHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPE 643
+ V +V+P + GE+G+ L ++RQ S AK+ + +P+ G ++ +I+ISGTP+
Sbjct: 670 AFVTNTTVEIVIPEHTFGSVYGENGSNLARLRQFSGAKVIVHEPRLGTSDRIIVISGTPD 729
Query: 644 QTHAAQSLIQAFVMS 658
+T AAQSL+ AF+++
Sbjct: 730 ETQAAQSLLHAFILT 744
>gi|356496890|ref|XP_003517298.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 602
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 196/686 (28%), Positives = 308/686 (44%), Gaps = 135/686 (19%)
Query: 13 DDDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQIS 72
D D+ T P+ K + S+ K PG I FR++C S + G+IG G ++SQ+
Sbjct: 8 DTDHQTTPSPKRSNTTTTNRSSKRPVFKVLPGQIAFRLVCHASTVGGLIGSSGSIVSQLR 67
Query: 73 QDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASVADESDNK 132
++TG I E+++S +++R++++ S + ++
Sbjct: 68 RETGCKIHCEDSLSSAEDRVILVIGSLSPRK----------------------------- 98
Query: 133 KEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLL 192
G +L DG E E S Q+A++ VFER+ ++E E V F +LL
Sbjct: 99 -------GLLLGDG--GEVEVSSAQEAVVRVFERVWDLEAEKGVNSNRAVNGEVFS-KLL 148
Query: 193 VLSTQVGCLLGKGGCVIKQIDKL----------PTCALASDEVVQITGEVDTVRKALKLI 242
++Q+G ++GKGG I I P CA +E+VQITG + V+KAL +
Sbjct: 149 AHTSQIGAVVGKGGKNITAIRNNTGAKIRVFPPPQCATKDEELVQITGGILAVKKALISV 208
Query: 243 SHQLLDNSP-------------RDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVAD 289
SH L D P + + +P P + ++S
Sbjct: 209 SHCLQDCPPLCKVPVTSSTPTVSSSDRLSSDPNAELFPHLNSLLTSMEG----------- 257
Query: 290 IHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCD 349
L + +E+ D E++ FRLLC + G VIGK GAI+R+L+ +TG
Sbjct: 258 --LSIYERTTNSNETSNRDSKGAEHEVV-FRLLCSNNVAGSVIGKRGAIVRALESKTGAS 314
Query: 350 IKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPD----------NRE 399
I +S +R++ IS + S QDAV+ V AR I D + E
Sbjct: 315 IIFAAPLSEHAERIVTISAVESLESCNSPAQDAVILV---FARIIEDHIGKGFLQVSSME 371
Query: 400 QTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGE 459
V RLLVA++ + C G G +I+E+R+++GA I+IL + +P AS+ + VV I GE
Sbjct: 372 SPVTARLLVATSTVNCFSGNEGQVISELREVTGADIQILHGESVPNGASDEDVVVQITGE 431
Query: 460 FEAVQEALFQITTRLRHHF-----FRDAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPG 514
+ VQ AL++IT+R+R + +A P N +N D + P G+
Sbjct: 432 YRCVQNALYKITSRIRDNLSPNEVVAEARPKSNWKVNK---DPIKGKPFARGKSAF---- 484
Query: 515 MYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHH--IHRPGMPPHMPDMKPWGPQGLM 572
P G F P + A +H I + G ++ + L
Sbjct: 485 -------------------PSGRFLPRN---AGVHAETILQNG------ELHTDLSENLE 516
Query: 573 EVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGAT 632
G M F + V ++V + + GEDG L +IRQIS A +T+ DP G +
Sbjct: 517 RGRGNM----FATVTNTTVEIIVSEHVFGSVYGEDGGNLDRIRQISGAIVTVYDPSVGTS 572
Query: 633 ETVIIISGTPEQTHAAQSLIQAFVMS 658
++ISGTP+QT AAQSL+QAF+ +
Sbjct: 573 GGKVVISGTPDQTFAAQSLLQAFIQT 598
>gi|297807547|ref|XP_002871657.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297317494|gb|EFH47916.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 544
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 175/520 (33%), Positives = 255/520 (49%), Gaps = 107/520 (20%)
Query: 47 MFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSE 106
+FR LCPV KI VIG+ GE++ Q+ DT IR+ E + G DER++ I
Sbjct: 45 VFRYLCPVKKIGSVIGRGGEIVKQLRMDTRSKIRIGEAIPGCDERVITI----------- 93
Query: 107 NLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFER 166
S +DE++ DG EK S Q AL + +R
Sbjct: 94 ----------------YSPSDETN-----------AFGDG---EKVLSPAQDALFRIHDR 123
Query: 167 MVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQID------------- 213
+V + ++E + + +LLV S Q+GC+LG+GG +++ I
Sbjct: 124 VVADDAQSE---DSSEGEQQVTAKLLVPSDQIGCILGRGGQIVQNIRSETGAQIRIIKDR 180
Query: 214 KLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTG--PSHPLPDH 271
+P CAL SDE++QI+GEV V+KAL I+ +L +N R + +G PS L H
Sbjct: 181 NMPLCALNSDELIQISGEVLIVKKALHQIASRLHENPSRSQNLLSSAISGGYPSGSLMSH 240
Query: 272 SVSSQGAPYATG--------HRDVADIHLPM--PPSIPKFHESGVLDRPKPSPEILTFRL 321
+ G P G RD D P+ PP R P RL
Sbjct: 241 A----GGPRLVGIAPLMGSYGRDGGDWSRPLYQPP------------RNDPPATEFFIRL 284
Query: 322 LCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQD 381
+ E + VIGKGGA+I L+QET IKV + + D LI IS +D S +
Sbjct: 285 VSPVENIASVIGKGGALINQLRQETRATIKVDSSRTEGNDCLITISAREVFEDAYSPTIE 344
Query: 382 AVLRVQTRIARAIP-DNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGK 440
AV+R+Q + + + D+ + TRLLV S++IGC+LGKGG+II EMR+++ A IRILGK
Sbjct: 345 AVMRLQPKCSEKVERDSGLVSFTTRLLVPSSRIGCILGKGGAIITEMRRMTKANIRILGK 404
Query: 441 DQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFF-RDAFPSINRPLNPTF----- 494
+ +PK AS+++E+V I+GE + +EAL QIT+RLR + F R+ S P+ P
Sbjct: 405 ENLPKVASDDDEMVQISGELDVAKEALIQITSRLRANVFDREGAVSALMPVLPYVPVAPD 464
Query: 495 --------------LDQVSPFPSFIGRRELSPPGMYSNFG 520
L++ +P+P G LS G YS++G
Sbjct: 465 SGDRLDYDSRDSRRLERGNPYPGGYGSSGLSAEG-YSSYG 503
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 98/353 (27%), Positives = 156/353 (44%), Gaps = 64/353 (18%)
Query: 318 TFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDR-- 375
FR LC +++G VIG+GG I++ L+ +T I++ EA+ G ++R+I I P+ +
Sbjct: 45 VFRYLCPVKKIGSVIGRGGEIVKQLRMDTRSKIRIGEAIPGCDERVITIYSPSDETNAFG 104
Query: 376 -----ISAPQDAVLRVQTRIARAIPDNR-----EQTVMTRLLVASNQIGCLLGKGGSIIA 425
+S QDA+ R+ R+ + EQ V +LLV S+QIGC+LG+GG I+
Sbjct: 105 DGEKVLSPAQDALFRIHDRVVADDAQSEDSSEGEQQVTAKLLVPSDQIGCILGRGGQIVQ 164
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPS 485
+R +GA IRI+ +P CA ++E++ I+GE V++AL QI +RL +
Sbjct: 165 NIRSETGAQIRIIKDRNMPLCALNSDELIQISGEVLIVKKALHQIASRLHEN-------- 216
Query: 486 INRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHS 545
P N S A+ G P GS
Sbjct: 217 ---------------------------PSRSQNLLSS-----AISGGYPSGS-------- 236
Query: 546 AFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRR--VPVVVPRSLVPII 603
M H P + P M +G G + P+ P PP + +V P + +
Sbjct: 237 -LMSHAGGPRLVGIAPLMGSYGRDG-GDWSRPLYQPPRNDPPATEFFIRLVSPVENIASV 294
Query: 604 QGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFV 656
G+ GA + Q+RQ + A I + + + +I IS A I+A +
Sbjct: 295 IGKGGALINQLRQETRATIKVDSSRTEGNDCLITISAREVFEDAYSPTIEAVM 347
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Query: 30 AGDYSE--NQPSKSFPGGIMF--RVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETV 85
GD+S QP ++ P F R++ PV I VIGK G +++Q+ Q+T TI+V+ +
Sbjct: 260 GGDWSRPLYQPPRNDPPATEFFIRLVSPVENIASVIGKGGALINQLRQETRATIKVDSSR 319
Query: 86 SGSDERLVVIEA 97
+ ++ L+ I A
Sbjct: 320 TEGNDCLITISA 331
>gi|326504604|dbj|BAK06593.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 531
Score = 224 bits (572), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 178/503 (35%), Positives = 245/503 (48%), Gaps = 74/503 (14%)
Query: 200 CLLGKGGCVIKQIDKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIP- 258
C +G C + +AS + +I+G RKAL L+S L DN D + P
Sbjct: 52 CFVGGSSCPLP---------MASPDS-EISGSFSAARKALLLVSTCLQDNPRPDTSNFPS 101
Query: 259 GNPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDR-PKPSPEI- 316
G P GP P V P H + +LP PP +P +H P P
Sbjct: 102 GRPFGP----PGSGVGC--PPGVDPHSQRS--YLP-PPHVPDYHARNFSSNGAAPGPRFF 152
Query: 317 ----LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHP 372
+ FR++C ++ VGGVIGKGG+ IR+L+ ETG +KV++ V+ +++R+IVIS +
Sbjct: 153 VEQEIVFRMICLNDMVGGVIGKGGSTIRALQSETGASVKVIDPVADSDERIIVISARENS 212
Query: 373 DDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSG 432
+ S QDA+LRV ++I+ A D + +V RLLV + IGCLLGKGGSIIAEMRKL+G
Sbjct: 213 EMMRSPSQDALLRVYSKISEASMD-KSSSVPARLLVPAQHIGCLLGKGGSIIAEMRKLTG 271
Query: 433 AYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFF-RDAFPSINRPLN 491
A IRI G +QIP+CA N+E+V + G F+++Q+AL IT R+R PS P
Sbjct: 272 ASIRIFGNEQIPRCAQRNDELVQVTGSFQSIQDALLHITGRIRDLIIPPKPHPSGGMPPY 331
Query: 492 PTFLDQVSPFPSFIGRRELSPPGMYSNFGPS-FHKFDAVGGPPPPGSFHPHD------DH 544
P + PS R+ +P P H F PP G F D
Sbjct: 332 PPVGN-----PSHHQSRQEAPSHHSGGMPPYPMHPFRPN---PPMGPFDVADPRPPGPPP 383
Query: 545 SAFMHHIHRPGMP-PH------------MPDMKPWGPQGLMEVGGPMGFPDFV------- 584
S M H+ MP P+ P + W P+ P PD V
Sbjct: 384 SHPMEHMGADRMPYPYGCEQGGPRPFVEQPSPRTWAPEA-PATDAPRSMPDTVPAVDFRK 442
Query: 585 ----------GPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATET 634
P VV+P + + G +G+ L +I++IS A IT+ DPKPG T +
Sbjct: 443 GPVSSENQVATPATTTTEVVIPCKYIGFVCGTNGSDLDEIKKISGAAITVHDPKPGDTNS 502
Query: 635 VIIISGTPEQTHAAQSLIQAFVM 657
+II G PEQT AQSLI AF+
Sbjct: 503 TVIICGDPEQTKKAQSLIHAFIF 525
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 108/249 (43%), Gaps = 73/249 (29%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
I+FR++C + GVIGK G + + +TG +++V + V+ SDER++VI A +
Sbjct: 157 IVFRMICLNDMVGGVIGKGGSTIRALQSETGASVKVIDPVADSDERIIVISARE------ 210
Query: 106 ENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFE 165
NSE S Q ALL V+
Sbjct: 211 ------------------------------------------NSEMMRSPSQDALLRVYS 228
Query: 166 RMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKL---------- 215
++ E + KSS RLLV + +GCLLGKGG +I ++ KL
Sbjct: 229 KISEASMD---------KSSSVPARLLVPAQHIGCLLGKGGSIIAEMRKLTGASIRIFGN 279
Query: 216 ---PTCALASDEVVQITGEVDTVRKALKLISHQLLD--NSPRDHESIPGNPTGPSHPLPD 270
P CA +DE+VQ+TG +++ AL I+ ++ D P+ H S G P P P
Sbjct: 280 EQIPRCAQRNDELVQVTGSFQSIQDALLHITGRIRDLIIPPKPHPSG-GMPPYPPVGNPS 338
Query: 271 HSVSSQGAP 279
H S Q AP
Sbjct: 339 HHQSRQEAP 347
>gi|30685269|ref|NP_851040.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|30685276|ref|NP_197031.3| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|110737265|dbj|BAF00580.1| hypothetical protein [Arabidopsis thaliana]
gi|110738501|dbj|BAF01176.1| hypothetical protein [Arabidopsis thaliana]
gi|332004758|gb|AED92141.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|332004759|gb|AED92142.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 548
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 180/565 (31%), Positives = 269/565 (47%), Gaps = 120/565 (21%)
Query: 15 DNHTEPNGKEKSQKLA---GDYSENQPSKSFPGG------------IMFRVLCPVSKIDG 59
D+ P+ ++ +K + DY +N SK G +FR LCPV KI
Sbjct: 4 DHRMSPDHRDSHRKRSRPQSDYDDNGGSKRRYRGDDRDSLVIDRDDTVFRYLCPVKKIGS 63
Query: 60 VIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNG 119
VIG+ G+++ Q+ DT IR+ E + G DER++ I
Sbjct: 64 VIGRGGDIVKQLRNDTRSKIRIGEAIPGCDERVITI------------------------ 99
Query: 120 REEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQ 179
S +DE++ DG EK S Q AL + +R+V + +E + +
Sbjct: 100 ---YSPSDETN-----------AFGDG---EKVLSPAQDALFRIHDRVVADDARSEDSPE 142
Query: 180 ENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQID-------------KLPTCALASDEVV 226
+ +LLV S Q+GC+LG+GG +++ I +P CAL SDE++
Sbjct: 143 ---GEKQVTAKLLVPSDQIGCILGRGGQIVQNIRSETGAQIRIVKDRNMPLCALNSDELI 199
Query: 227 QITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATG--- 283
QI+GEV V+KAL I+ +L +N R + + P+ L H+ G P G
Sbjct: 200 QISGEVLIVKKALLQIASRLHENPSRSQNLLSSSGGYPAGSLMSHA----GGPRLVGLAP 255
Query: 284 -----HRDVADIHLPM--PPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGG 336
RD D P+ PP R P RL+ E + VIGKGG
Sbjct: 256 LMGSYGRDAGDWSRPLYQPP------------RNDPPATEFFIRLVSPVENIASVIGKGG 303
Query: 337 AIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIP- 395
A+I L+QET IKV + + D LI IS +D S +AV+R+Q + + +
Sbjct: 304 ALINQLRQETRATIKVDSSRTEGNDCLITISAREVFEDAYSPTIEAVMRLQPKCSDKVER 363
Query: 396 DNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVL 455
D+ + TRLLV S++IGC+LGKGG+II EMR+++ A IRILGK+ +PK AS+++E+V
Sbjct: 364 DSGLVSFTTRLLVPSSRIGCILGKGGAIITEMRRMTKANIRILGKENLPKVASDDDEMVQ 423
Query: 456 INGEFEAVQEALFQITTRLRHHFF-RDAFPSINRPLNPTF-------------------L 495
I+GE + +EAL QIT+RLR + F R+ S P+ P L
Sbjct: 424 ISGELDVAKEALIQITSRLRANVFDREGAVSALMPVLPYVPVAPDAGDRFDYDSRDSRRL 483
Query: 496 DQVSPFPSFIGRRELSPPGMYSNFG 520
++ +P+P G +S G YS +G
Sbjct: 484 ERGNPYPGGYGSSGVSAEG-YSPYG 507
>gi|222641854|gb|EEE69986.1| hypothetical protein OsJ_29891 [Oryza sativa Japonica Group]
Length = 609
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 149/401 (37%), Positives = 212/401 (52%), Gaps = 42/401 (10%)
Query: 294 MPPSIPKFHESGVL-DRPKPSPEI-----LTFRLLCHDERVGGVIGKGGAIIRSLKQETG 347
+PPS+P +H + P P + FR++C +E VG +IGKGG+ IR+L+ ETG
Sbjct: 208 LPPSMPDYHARNYSSNMAAPGPRFFVEQEIVFRMICLNEMVGSIIGKGGSTIRALQSETG 267
Query: 348 CDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLL 407
IK++E S +E+R+IVIS + + S QDAVLRV +RI+ + D + V RLL
Sbjct: 268 ASIKIIEPNSDSEERVIVISAHENSEMMHSPAQDAVLRVHSRISESSMD-KSSAVTARLL 326
Query: 408 VASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEAL 467
V S IGCLLGKGGSIIAEMRK++GA IRI G +QIP+CA N+E+V + G F+++Q+AL
Sbjct: 327 VPSQHIGCLLGKGGSIIAEMRKITGAGIRIFGNEQIPRCAQRNDELVQVTGSFQSIQDAL 386
Query: 468 FQITTRLRHHFF----------------RDAFPSINR----PLNPTFLDQVSPFPSFIGR 507
IT R+R +A P R P +PT P PSF
Sbjct: 387 LHITGRIRDVIIPMKPHPGGGMPPYPPGGNAPPHHPRQEPAPPHPTGGMPPYPMPSFRAD 446
Query: 508 RELSPPGMYSNFGPSFHKFDAVGGPPPPGSF--------HPHDDH---SAFMHHIHRPGM 556
R + P M + P H + +G P S+ P D SA+
Sbjct: 447 RPMGPFDMVDHRPPPPHSMEHMGADRMPYSYGCEQGGGPRPFLDQPSPSAWAPEAPNSEA 506
Query: 557 PPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQ 616
P +MP+ P P + G + + V P V++PR + I G +G+ L +I++
Sbjct: 507 PRNMPETVP--PADFRK--GAVAGTNQVATPSNATEVIIPRKYIGFICGANGSDLAEIKK 562
Query: 617 ISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVM 657
+S A IT+ PKPG ++II G P+QT AQSL+ AF+
Sbjct: 563 MSGATITVHHPKPGDANALVIICGDPDQTKKAQSLLHAFIF 603
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 115/459 (25%), Positives = 177/459 (38%), Gaps = 139/459 (30%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
I+FR++C + +IGK G + + +TG +I++ E S S+ER++VI A +
Sbjct: 237 IVFRMICLNEMVGSIIGKGGSTIRALQSETGASIKIIEPNSDSEERVIVISAHE------ 290
Query: 106 ENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFE 165
NSE S Q A+L V
Sbjct: 291 ------------------------------------------NSEMMHSPAQDAVLRVHS 308
Query: 166 RMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDK----------- 214
R +++ KSS RLLV S +GCLLGKGG +I ++ K
Sbjct: 309 R---------ISESSMDKSSAVTARLLVPSQHIGCLLGKGGSIIAEMRKITGAGIRIFGN 359
Query: 215 --LPTCALASDEVVQITGEVDTVRKALKLISHQLLD--------------------NSPR 252
+P CA +DE+VQ+TG +++ AL I+ ++ D N+P
Sbjct: 360 EQIPRCAQRNDELVQVTGSFQSIQDALLHITGRIRDVIIPMKPHPGGGMPPYPPGGNAPP 419
Query: 253 DH---ESIPGNPTG--PSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVL 307
H E P +PTG P +P+P P+ D+ D H P P P E
Sbjct: 420 HHPRQEPAPPHPTGGMPPYPMPSFRADRPMGPF-----DMVD-HRPPP---PHSMEHMGA 470
Query: 308 DRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVIS 367
DR + + C E+ GG R + EA + R + +
Sbjct: 471 DR-------MPYSYGC--EQGGGP--------RPFLDQPSPSAWAPEAPNSEAPRNMPET 513
Query: 368 GPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEM 427
P P D +V T P N + ++ R IG + G GS +AE+
Sbjct: 514 VP--PADFRKGAVAGTNQVAT------PSNATEVIIPR-----KYIGFICGANGSDLAEI 560
Query: 428 RKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEA 466
+K+SGA I + PK N +V+I G+ + ++A
Sbjct: 561 KKMSGATITV----HHPKPGDAN-ALVIICGDPDQTKKA 594
>gi|125555220|gb|EAZ00826.1| hypothetical protein OsI_22856 [Oryza sativa Indica Group]
Length = 693
Score = 221 bits (564), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 190/647 (29%), Positives = 299/647 (46%), Gaps = 115/647 (17%)
Query: 48 FRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSEN 107
FR+LCP SK V G ++++ DT + + G R VIE SD
Sbjct: 87 FRILCPQSK---VYGFPPSFIAKVRDDTNAVVTIHLPYPGDAVR--VIETSDGA------ 135
Query: 108 LEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERM 167
R E +GR + S Q+ALL+V R+
Sbjct: 136 ------RREADGRPPS-----------------------------FSPAQEALLMVHRRI 160
Query: 168 VEVEPETEVADQEN-------TKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI-------- 212
+E EP+ D E K RL+V VGCLLGKGG +I+Q+
Sbjct: 161 LETEPDDGDEDGEYGPRAKDARDRGKVTTRLIVPRLHVGCLLGKGGKIIEQMRAETKTHI 220
Query: 213 ------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSH 266
P C S+EVVQ+ GE + V+KA+ +IS +L ++ RD G P H
Sbjct: 221 RILPRDQHTPRCVSLSEEVVQVVGEGNCVKKAVAIISDRLKESLHRDRGPFRGRMNSPEH 280
Query: 267 PLPDHSVSSQGA--------PYATGHRDVADIHLPMPPSIPKFHESG--VLDRPKPSPEI 316
P GA PY G D + M P +F +G + D + +
Sbjct: 281 RFPQEDEYYGGAQQMPAYEEPY--GRPDQIRNNTSMEPPGYEFDSNGGKINDHTEILFDD 338
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
+ FR+LC ++V ++G ++ L+++ G DI++ +++ G+++R+I+I+ PD +
Sbjct: 339 IIFRILCPSDKVNSLVGTRDGLLEMLQEDVGVDIRLTDSLDGSDERIIIITSREGPDHEL 398
Query: 377 SAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIR 436
Q+A+L +QT I PD ++ + TRLLV S++I C G+ GS ++++++ + A ++
Sbjct: 399 FPAQEALLHLQTHIVDLGPD-KDNIITTRLLVPSSEIACFEGRDGS-LSDIQRQTSANVQ 456
Query: 437 ILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLD 496
IL + +P CA E++E++ I GE A ++AL QIT +LR +F+R+ P N+ N T
Sbjct: 457 ILPRQALPSCALESDELIQIVGEIRAARDALVQITAKLRSYFYRE-IPGPNQLGNITVHG 515
Query: 497 QVSPFPSFIGRRELSPPGMYSNFG---PSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHR 553
+SP SP G Y PS+ + V P S+ D +
Sbjct: 516 SISPAKG-------SPRGPYQGSDIPMPSYQQAQHV-----PASWK---DSGGGANMSFE 560
Query: 554 PGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRR--VPVVVPRSLVPIIQGEDGACL 611
G + DM+ + F P R + VV+P+S V + G+ L
Sbjct: 561 QGSNIN-DDMRQSAAK------------RFAVPLVTRSTLEVVIPKSAVASLTMRAGSKL 607
Query: 612 KQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMS 658
QI ++S A +T+ D +P A E V+ ISGTPEQ AQSL+Q F++S
Sbjct: 608 AQISEMSGATVTLADERPDAIEKVVRISGTPEQADKAQSLLQGFILS 654
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 96/226 (42%), Gaps = 72/226 (31%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
I+FR+LCP K++ ++G ++ + +D GV IR+ +++ GSDER+++I + +
Sbjct: 339 IIFRILCPSDKVNSLVGTRDGLLEMLQEDVGVDIRLTDSLDGSDERIIIITSRE------ 392
Query: 106 ENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFE 165
+ E Q+ALL +
Sbjct: 393 ------------------------------------------GPDHELFPAQEALLHLQT 410
Query: 166 RMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCV------------IKQID 213
+V++ P+ K + RLLV S+++ C G+ G + I
Sbjct: 411 HIVDLGPD---------KDNIITTRLLVPSSEIACFEGRDGSLSDIQRQTSANVQILPRQ 461
Query: 214 KLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPG 259
LP+CAL SDE++QI GE+ R AL I+ +L R+ IPG
Sbjct: 462 ALPSCALESDELIQIVGEIRAARDALVQITAKLRSYFYRE---IPG 504
>gi|225455340|ref|XP_002272224.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera]
Length = 661
Score = 221 bits (564), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 193/658 (29%), Positives = 300/658 (45%), Gaps = 112/658 (17%)
Query: 48 FRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSEN 107
+R+LC K GVIGK G ++ I Q TG I V E + G +ER +IE SD ++ E
Sbjct: 69 YRILCHDVKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEER--IIEISDTRRRDPE- 125
Query: 108 LEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERM 167
GR + S Q+AL ++ +R+
Sbjct: 126 -----------GRM-----------------------------PQFSPAQEALFMIHDRI 145
Query: 168 VEVEPETEVADQENTKS----------SKFVLRLLVLSTQVGCLLGKGGCVIKQI----- 212
+E + N ++ R++V VGCLLGKGG +I+Q+
Sbjct: 146 LESDAGFGNGFGGNGDDDDDFGPRGGGNRVATRMVVSRMHVGCLLGKGGKIIEQMRIETK 205
Query: 213 ---------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRD----HESIPG 259
LP C S+E+VQ+ G+V+ V+ A+ IS +L ++ RD H I
Sbjct: 206 TQIRILPRDHNLPRCVSMSEEIVQVVGDVNAVKNAIANISSRLRESQHRDRSHFHGRIQS 265
Query: 260 NPTGPSHPLPDHSV------------SSQGAPYATGHRDVADIHLPMPPSIPKFHESGVL 307
+P P D+S +S G+ +TG S ESG
Sbjct: 266 SPERFFPPDDDYSHMNNAPRRMPIDGNSFGSRVSTGLVGTRSNSFASRTSGYTL-ESGAA 324
Query: 308 DRPKPSPEIL----TFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRL 363
+ + L FR+LC ++V V+G+ II L+ E G D+KV + V+G+ +++
Sbjct: 325 PIADNAQQFLGEDIVFRILCPVDKVECVVGESDGIIELLQNEIGVDVKVADHVAGSNEQI 384
Query: 364 IVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSI 423
IVI+ PDD + Q+A+L +QTRI +PD +E + TRLLV S++IGC G+ S
Sbjct: 385 IVITSEEGPDDELFPAQEALLHIQTRIVNLLPD-KENVITTRLLVPSSEIGCFEGRDCS- 442
Query: 424 IAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAF 483
++EMR+L+GA I+I+ ++Q+P S +E++ I GE +A ++AL ++T+RLR + +R+ F
Sbjct: 443 LSEMRRLTGANIQIVPREQLPAFISGTDELLEIVGEIKAARDALVEVTSRLRSYLYREFF 502
Query: 484 PSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDD 543
P D P S G E S P +N P+ A PP ++
Sbjct: 503 PK----------DMPPPSISAPGSLEASSP---NNITPAREGHTA--SDPPTTNYQNVQA 547
Query: 544 HSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPII 603
++ G P L + P+ + VV+P VP +
Sbjct: 548 IASVQPSKDSGGTGGETVKQNETVPSVLNRI--PVTL-----VTRSTLEVVIPEHAVPKL 600
Query: 604 QGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSETE 661
L QI + S A +T+ + + AT +I ISGTPEQT AQSL+Q F++S +E
Sbjct: 601 ITRSKNKLAQISEWSGANVTLLEDRLEATGKIIQISGTPEQTEKAQSLLQGFILSISE 658
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 106/188 (56%), Gaps = 24/188 (12%)
Query: 318 TFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAH--PDDR 375
++R+LCHD + GGVIGK G+II+S++Q TG I V E + G E+R+I IS P+ R
Sbjct: 68 SYRILCHDVKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 127
Query: 376 I---SAPQDAVLRVQTRIARA------------------IPDNREQTVMTRLLVASNQIG 414
+ S Q+A+ + RI + P V TR++V+ +G
Sbjct: 128 MPQFSPAQEALFMIHDRILESDAGFGNGFGGNGDDDDDFGPRGGGNRVATRMVVSRMHVG 187
Query: 415 CLLGKGGSIIAEMRKLSGAYIRILGKDQ-IPKCASENEEVVLINGEFEAVQEALFQITTR 473
CLLGKGG II +MR + IRIL +D +P+C S +EE+V + G+ AV+ A+ I++R
Sbjct: 188 CLLGKGGKIIEQMRIETKTQIRILPRDHNLPRCVSMSEEIVQVVGDVNAVKNAIANISSR 247
Query: 474 LRHHFFRD 481
LR RD
Sbjct: 248 LRESQHRD 255
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 98/214 (45%), Gaps = 71/214 (33%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
I+FR+LCPV K++ V+G+ ++ + + GV ++V + V+GS+E+++VI TS
Sbjct: 338 IVFRILCPVDKVECVVGESDGIIELLQNEIGVDVKVADHVAGSNEQIIVI--------TS 389
Query: 106 ENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFE 165
E EG + E Q+ALL +
Sbjct: 390 E--------------------------------EG--------PDDELFPAQEALLHIQT 409
Query: 166 RMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI------------- 212
R+V + P D+EN ++ RLLV S+++GC G+ C + ++
Sbjct: 410 RIVNLLP-----DKENVITT----RLLVPSSEIGCFEGR-DCSLSEMRRLTGANIQIVPR 459
Query: 213 DKLPTCALASDEVVQITGEVDTVRKALKLISHQL 246
++LP +DE+++I GE+ R AL ++ +L
Sbjct: 460 EQLPAFISGTDELLEIVGEIKAARDALVEVTSRL 493
>gi|356528011|ref|XP_003532599.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 433
Score = 221 bits (563), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 156/465 (33%), Positives = 234/465 (50%), Gaps = 72/465 (15%)
Query: 224 EVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGN-------PTGPSHPLP------- 269
E+ QI G++ +V+KAL +SH+L D P D + G+ S PL
Sbjct: 8 ELYQIEGQLTSVKKALIAVSHRLQDCPPPDRTKMTGSRHYEVVQSETFSVPLESLTNLHI 67
Query: 270 DHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVG 329
DH + +R + S + + LD PK + +TFR++C ++RVG
Sbjct: 68 DHHLQRSSTLSTLSNRSNGNASGAHKLS-AEVNRVSALD-PKAYQQEVTFRIICSNDRVG 125
Query: 330 GVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTR 389
VIGKGG+I+R+L+ E+G I V ++ EDRL+ I+ +P+ S Q AV+ V ++
Sbjct: 126 AVIGKGGSIVRALQNESGAIISVGPSLVECEDRLVTITASENPESTYSPAQKAVVLVFSK 185
Query: 390 IARA-------IPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQ 442
A + +E V RL+V SNQ+GCLLGKGG+I++EMRK +GA IR++G DQ
Sbjct: 186 SVEAGVEKGLELGSKKEPYVTARLVVPSNQVGCLLGKGGAIVSEMRKATGANIRVIGNDQ 245
Query: 443 IPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSPFP 502
+P C S+N+++V I+G F VQ A+ T RLR H F VS
Sbjct: 246 VPMCVSDNDQLVQISGVFSNVQAAIHNATGRLRDHLF------------------VSTQN 287
Query: 503 SFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGM--PPHM 560
S G R LS GG P H + HS PG+ P +
Sbjct: 288 SG-GARSLSSV--------------LAGGQPTLAISHSLNRHSL-------PGLQAPQTV 325
Query: 561 PDMKPWGPQGLME--VGGPMGFPDFVGP-----PHRRVPVVVPRSLVPIIQGEDGACLKQ 613
+ G G+ + G G + V +VVP ++ + GE+G+ L +
Sbjct: 326 AGINSRGTNGVSRGLISRKGGLELISGSKTAIVTNTTVQIVVPDDVIGSVYGENGSNLAR 385
Query: 614 IRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMS 658
+RQIS AK+ + +P+PG ++ IIISGTP++T AAQSL+QAF+++
Sbjct: 386 LRQISGAKVIVHEPRPGTSDRTIIISGTPDETRAAQSLLQAFILA 430
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 159/372 (42%), Gaps = 91/372 (24%)
Query: 40 KSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASD 99
K++ + FR++C ++ VIGK G ++ + ++G I V ++ ++RLV I AS+
Sbjct: 107 KAYQQEVTFRIICSNDRVGAVIGKGGSIVRALQNESGAIISVGPSLVECEDRLVTITASE 166
Query: 100 NKKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKA 159
N E S QKA
Sbjct: 167 NP------------------------------------------------ESTYSPAQKA 178
Query: 160 LLLVFERMVE--VEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI----- 212
++LVF + VE VE E+ + K RL+V S QVGCLLGKGG ++ ++
Sbjct: 179 VVLVFSKSVEAGVEKGLELGSK---KEPYVTARLVVPSNQVGCLLGKGGAIVSEMRKATG 235
Query: 213 --------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDN---------SPRDHE 255
D++P C +D++VQI+G V+ A+ + +L D+ R
Sbjct: 236 ANIRVIGNDQVPMCVSDNDQLVQISGVFSNVQAAIHNATGRLRDHLFVSTQNSGGARSLS 295
Query: 256 SI--PGNPT-GPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPK--FHESGVLDRP 310
S+ G PT SH L HS+ AP + VA I+ + + G L+
Sbjct: 296 SVLAGGQPTLAISHSLNRHSLPGLQAP-----QTVAGINSRGTNGVSRGLISRKGGLELI 350
Query: 311 KPSPEIL----TFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVI 366
S + T +++ D+ +G V G+ G+ + L+Q +G + V E GT DR I+I
Sbjct: 351 SGSKTAIVTNTTVQIVVPDDVIGSVYGENGSNLARLRQISGAKVIVHEPRPGTSDRTIII 410
Query: 367 SGPAHPDDRISA 378
SG PD+ +A
Sbjct: 411 SGT--PDETRAA 420
>gi|302143921|emb|CBI23026.3| unnamed protein product [Vitis vinifera]
Length = 575
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 192/648 (29%), Positives = 298/648 (45%), Gaps = 115/648 (17%)
Query: 48 FRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSEN 107
+R+LC K GVIGK G ++ I Q TG I V E + G +ER +IE SD ++ E
Sbjct: 6 YRILCHDVKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEER--IIEISDTRRRDPE- 62
Query: 108 LEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERM 167
GR + S Q+AL ++ +R+
Sbjct: 63 -----------GRM-----------------------------PQFSPAQEALFMIHDRI 82
Query: 168 VEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI--------------D 213
+E + + F ++V VGCLLGKGG +I+Q+
Sbjct: 83 LESD-------------AGFGNGMVVSRMHVGCLLGKGGKIIEQMRIETKTQIRILPRDH 129
Query: 214 KLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRD----HESIPGNPTGPSHPLP 269
LP C S+E+VQ+ G+V+ V+ A+ IS +L ++ RD H I +P P
Sbjct: 130 NLPRCVSMSEEIVQVVGDVNAVKNAIANISSRLRESQHRDRSHFHGRIQSSPERFFPPDD 189
Query: 270 DHS------------VSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEIL 317
D+S +S G+ +TG S ESG + + L
Sbjct: 190 DYSHMNNAPRRMPIDGNSFGSRVSTGLVGTRSNSFASRTSGYTL-ESGAAPIADNAQQFL 248
Query: 318 ----TFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPD 373
FR+LC ++V V+G+ II L+ E G D+KV + V+G+ +++IVI+ PD
Sbjct: 249 GEDIVFRILCPVDKVECVVGESDGIIELLQNEIGVDVKVADHVAGSNEQIIVITSEEGPD 308
Query: 374 DRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
D + Q+A+L +QTRI +PD +E + TRLLV S++IGC G+ S ++EMR+L+GA
Sbjct: 309 DELFPAQEALLHIQTRIVNLLPD-KENVITTRLLVPSSEIGCFEGRDCS-LSEMRRLTGA 366
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPT 493
I+I+ ++Q+P S +E++ I GE +A ++AL ++T+RLR + +R+ FP
Sbjct: 367 NIQIVPREQLPAFISGTDELLEIVGEIKAARDALVEVTSRLRSYLYREFFPK-------- 418
Query: 494 FLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHR 553
D P S G E S P +N P+ A PP ++ ++
Sbjct: 419 --DMPPPSISAPGSLEASSP---NNITPAREGHTA--SDPPTTNYQNVQAIASVQPSKDS 471
Query: 554 PGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQ 613
G P L + P+ + VV+P VP + L Q
Sbjct: 472 GGTGGETVKQNETVPSVLNRI--PVTLVT-----RSTLEVVIPEHAVPKLITRSKNKLAQ 524
Query: 614 IRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSETE 661
I + S A +T+ + + AT +I ISGTPEQT AQSL+Q F++S +E
Sbjct: 525 ISEWSGANVTLLEDRLEATGKIIQISGTPEQTEKAQSLLQGFILSISE 572
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 103/170 (60%), Gaps = 11/170 (6%)
Query: 318 TFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAH--PDDR 375
++R+LCHD + GGVIGK G+II+S++Q TG I V E + G E+R+I IS P+ R
Sbjct: 5 SYRILCHDVKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 64
Query: 376 I---SAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSG 432
+ S Q+A+ + RI + V++R+ +GCLLGKGG II +MR +
Sbjct: 65 MPQFSPAQEALFMIHDRILESDAGFGNGMVVSRM-----HVGCLLGKGGKIIEQMRIETK 119
Query: 433 AYIRILGKDQ-IPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRD 481
IRIL +D +P+C S +EE+V + G+ AV+ A+ I++RLR RD
Sbjct: 120 TQIRILPRDHNLPRCVSMSEEIVQVVGDVNAVKNAIANISSRLRESQHRD 169
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 119/269 (44%), Gaps = 82/269 (30%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
I+FR+LCPV K++ V+G+ ++ + + GV ++V + V+GS+E+++VI TS
Sbjct: 252 IVFRILCPVDKVECVVGESDGIIELLQNEIGVDVKVADHVAGSNEQIIVI--------TS 303
Query: 106 ENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFE 165
E EG + E Q+ALL +
Sbjct: 304 E--------------------------------EG--------PDDELFPAQEALLHIQT 323
Query: 166 RMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI------------- 212
R+V + P D+EN ++ RLLV S+++GC G+ C + ++
Sbjct: 324 RIVNLLP-----DKENVITT----RLLVPSSEIGCFEGR-DCSLSEMRRLTGANIQIVPR 373
Query: 213 DKLPTCALASDEVVQITGEVDTVRKAL-----KLISHQLLDNSPRDHE----SIPGN--P 261
++LP +DE+++I GE+ R AL +L S+ + P+D S PG+
Sbjct: 374 EQLPAFISGTDELLEIVGEIKAARDALVEVTSRLRSYLYREFFPKDMPPPSISAPGSLEA 433
Query: 262 TGPSHPLPDHSVSSQGAPYATGHRDVADI 290
+ P++ P + P T +++V I
Sbjct: 434 SSPNNITPAREGHTASDPPTTNYQNVQAI 462
>gi|356525090|ref|XP_003531160.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 625
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 198/690 (28%), Positives = 308/690 (44%), Gaps = 111/690 (16%)
Query: 9 KRPHDDDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIMFRVLCPVSKIDGVIGKDGEMM 68
KR H +H +G K QK +++ + I++R+LCP I VIGK+G+++
Sbjct: 6 KRYHSQRDH---DGDRKHQKRRMTDRDDRGNDEL---IVYRILCPDEVIGSVIGKNGKVI 59
Query: 69 SQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASVADE 128
+ I Q+T ++V + GS +R++ I +KE E
Sbjct: 60 NSIRQETRAKVKVVDPFPGSKDRVITIYCYVKEKEDVE---------------------- 97
Query: 129 SDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSKFV 188
+ D ++ Q ALL V + + D E + +
Sbjct: 98 --------------IDDEFAGKEPLCAAQDALLKV--HVAIANSIAAIGDSEKKRKDRDE 141
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQI----------------DKLPTCALASDEVVQITGEV 232
++LV S+Q ++GK G IK++ D +CA+ D V ITGE
Sbjct: 142 CQILVPSSQSANIIGKAGATIKKLRSKTRANIKVTAKDAADPTHSCAMEFDNFVVITGES 201
Query: 233 DTVRKALKLISHQLLDNSPRDHES-----------------IPGNPTGPSHPLPDHSVSS 275
+ V++AL +S + PR+ S +P P G +P D V+
Sbjct: 202 EAVKRALFAVSSIMYKFGPREDISLDTAVPEAPPSIIIPSDVPVYPPGGLYPASDPIVTP 261
Query: 276 QGAPYATGHRDVADI--HLPMPPSIPKFHE-----SGVLDRPKPSPEILTFRLLCHDERV 328
+ P G +V D+ + S P + SGV E L R+LC +++
Sbjct: 262 RAVPQIIGATNVPDLQGYADAGNSWPMYSSALPVVSGV---GASRSEELIIRMLCPSDKI 318
Query: 329 GGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQT 388
G VIGKGG+ I+S++Q +G I+V ++ + ++ LI+I+ P D S +AVL +Q
Sbjct: 319 GRVIGKGGSTIKSMRQASGAHIEVDDSKANFDECLIIITTTESPSDLKSMAVEAVLLMQG 378
Query: 389 RIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCAS 448
+I D + TV RLLV S IGC++GK GSII E+RK + A +RI D+ PKCA
Sbjct: 379 KIN----DEDDTTVSIRLLVPSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK-PKCAD 433
Query: 449 ENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSPFPSFIGRR 508
N+E+V + G + V++AL QI RLR R+ + NP+ + S +P G
Sbjct: 434 ANDELVEVGGSVDCVRDALIQIILRLRDDVLRER----DTGHNPSIGAE-SLYPGSAG-- 486
Query: 509 ELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGP 568
LS P M H V P + H S + P P P G
Sbjct: 487 -LSLPSM-------MHSVPPVAAP----MVYDHRAESGAGLGMLSPSSPYGGYGSLPMGD 534
Query: 569 QGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPK 628
G + PP + +++P + V + G+ GA + IR+IS A I I+D K
Sbjct: 535 NGYGSMSSYATKLYGGLPPPSTLDMLIPANAVGKVLGKGGANIANIRKISGASIEISDNK 594
Query: 629 PGATETVIIISGTPEQTHAAQSLIQAFVMS 658
+ + +ISGTPEQ AA++LIQAF+M+
Sbjct: 595 SARGDRIALISGTPEQKRAAENLIQAFIMA 624
>gi|54290950|dbj|BAD61631.1| putative HEN4 [Oryza sativa Japonica Group]
Length = 662
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 187/647 (28%), Positives = 299/647 (46%), Gaps = 115/647 (17%)
Query: 48 FRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSEN 107
FR+LCP SK V G ++++ DT + + G R VIE SD
Sbjct: 87 FRILCPQSK---VYGFPPSFIAKVRDDTNAVVTIHLPYPGDAVR--VIETSDGA------ 135
Query: 108 LEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERM 167
R E +GR + S Q+ALL+V R+
Sbjct: 136 ------RREADGRPPS-----------------------------FSPAQEALLMVHRRI 160
Query: 168 VEVEPETEVADQEN-------TKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI-------- 212
+E EP+ D E K RL+V VGCLLGKGG +I+Q+
Sbjct: 161 LETEPDDGDEDGEYGPRAKDARDRGKVTTRLIVPRLHVGCLLGKGGKIIEQMRAETKTHI 220
Query: 213 ------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSH 266
P C S+EVVQ+ GE + V+KA+ +IS +L ++ RD G P H
Sbjct: 221 RILPRDQHTPRCVSLSEEVVQVVGEGNCVKKAVAIISDRLKESLHRDRGPFRGRMNSPEH 280
Query: 267 PLPDHSVSSQGA--------PYATGHRDVADIHLPMPPSIPKFHESG--VLDRPKPSPEI 316
P GA PY + + + +P +F +G + D + +
Sbjct: 281 RFPQEDEYYGGAQQMPAYEEPYGRPDQIRNNTSMELPGY--EFDSNGGKINDHTEILFDD 338
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
+ FR+LC ++V ++G ++ L+++ G DI++ +++ G+++R+I+I+ PD +
Sbjct: 339 IIFRILCPSDKVNSLVGTRDGLLEMLQEDVGVDIRLTDSLDGSDERIIIITSREGPDHEL 398
Query: 377 SAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIR 436
Q+A+L +QT I PD ++ + TRLLV S++I C G+ GS ++++++ + A ++
Sbjct: 399 FPAQEALLHLQTHIVDLGPD-KDNIITTRLLVPSSEIACFEGRDGS-LSDIQRQTSANVQ 456
Query: 437 ILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLD 496
IL + +P CA E++E++ I GE A ++AL QIT +LR +F+R+ P N+ N T
Sbjct: 457 ILPRQALPSCALESDELIQIVGEIRAARDALVQITAKLRSYFYRE-IPGPNQLGNITVHG 515
Query: 497 QVSPFPSFIGRRELSPPGMYSNFG---PSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHR 553
+SP SP G Y PS+ + V P S+ D +
Sbjct: 516 SISPAKG-------SPRGPYQGSDIPMPSYQQAQHV-----PASWK---DSGGGANMSFE 560
Query: 554 PGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRR--VPVVVPRSLVPIIQGEDGACL 611
G + DM+ + F P R + VV+P+S V + G+ L
Sbjct: 561 QGSNIN-DDMRQSAAK------------RFAVPLVTRSTLEVVIPKSAVASLTMRAGSKL 607
Query: 612 KQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMS 658
QI ++S A +T+ D +P A E V+ ISGTPEQ AQSL+Q F++S
Sbjct: 608 AQISEMSGATVTLADERPDAIEKVVRISGTPEQADKAQSLLQGFILS 654
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 84/385 (21%), Positives = 149/385 (38%), Gaps = 104/385 (27%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
I+FR+LCP K++ ++G ++ + +D GV IR+ +++ GSDER+++I + +
Sbjct: 339 IIFRILCPSDKVNSLVGTRDGLLEMLQEDVGVDIRLTDSLDGSDERIIIITSRE------ 392
Query: 106 ENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFE 165
+ E Q+ALL +
Sbjct: 393 ------------------------------------------GPDHELFPAQEALLHLQT 410
Query: 166 RMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCV------------IKQID 213
+V++ P+ K + RLLV S+++ C G+ G + I
Sbjct: 411 HIVDLGPD---------KDNIITTRLLVPSSEIACFEGRDGSLSDIQRQTSANVQILPRQ 461
Query: 214 KLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRD------------HESIP--- 258
LP+CAL SDE++QI GE+ R AL I+ +L R+ H SI
Sbjct: 462 ALPSCALESDELIQIVGEIRAARDALVQITAKLRSYFYREIPGPNQLGNITVHGSISPAK 521
Query: 259 GNPTGPSH----PLPDH--------SVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGV 306
G+P GP P+P + S G ++I+ M S K +
Sbjct: 522 GSPRGPYQGSDIPMPSYQQAQHVPASWKDSGGGANMSFEQGSNINDDMRQSAAKRFAVPL 581
Query: 307 LDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVI 366
+ R T ++ V + + G+ + + + +G + + + ++++ I
Sbjct: 582 VTRS-------TLEVVIPKSAVASLTMRAGSKLAQISEMSGATVTLADERPDAIEKVVRI 634
Query: 367 SG-PAHPDDRISAPQDAVLRVQTRI 390
SG P D S Q +L +Q I
Sbjct: 635 SGTPEQADKAQSLLQGFILSIQDDI 659
>gi|224141011|ref|XP_002323868.1| predicted protein [Populus trichocarpa]
gi|222866870|gb|EEF04001.1| predicted protein [Populus trichocarpa]
Length = 531
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 158/457 (34%), Positives = 236/457 (51%), Gaps = 79/457 (17%)
Query: 47 MFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSE 106
++R LCP KI +IG+ GE++ Q+ DT IRV ETV G +ER+V I
Sbjct: 43 VYRYLCPARKIGSIIGRGGEIIKQLRIDTKSKIRVGETVPGCEERVVTI----------- 91
Query: 107 NLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFER 166
S +DE+ N+ EDS N S Q AL V ++
Sbjct: 92 ----------------YSPSDET-NEYEDSGNY-------------ISPAQDALFRVHDK 121
Query: 167 MVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI-------------D 213
++ + + E ++ S + +LLV S Q+GC++GKGG +++ I +
Sbjct: 122 VIAEDLQVE---DDSEGSPQVTAKLLVPSDQIGCIIGKGGQIVQNIRSETGAVIRILKDE 178
Query: 214 KLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDH----ESIP------GNPTG 263
LP CAL+SDE+VQI+GE ++KAL I+ +L DN R ++P G+ G
Sbjct: 179 HLPPCALSSDELVQISGEAAVLKKALYQIASRLHDNPSRSQHLLVSAVPNVYSSVGSLVG 238
Query: 264 PSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLC 323
PS P ++ PY D D + S P R + + + + R++C
Sbjct: 239 PSAAAPIVGIAPLMGPYGGFKGDTGDWSRSLY-SAP---------RDELASKEFSLRVVC 288
Query: 324 HDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAV 383
+G VIGKGG II ++QE+G IKV +V+ +D LI IS D S +A
Sbjct: 289 PTANIGAVIGKGGTIINQIRQESGATIKVDSSVAEGDDCLITISAK-EIYDHYSPTIEAA 347
Query: 384 LRVQTRIARAIP-DNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQ 442
+R+Q R + + D+ + TRLLV S++IGCLLGKGG+II EMRKL+ A IRI K+
Sbjct: 348 VRLQPRCSEKMERDSGLISFTTRLLVPSSRIGCLLGKGGAIIDEMRKLTKAIIRIPRKEN 407
Query: 443 IPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFF 479
+PK AS+++E+V I G+ + ++AL QI+ RLR + F
Sbjct: 408 LPKVASDDDEMVQIAGDLDVAKDALIQISRRLRANVF 444
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 108/187 (57%), Gaps = 18/187 (9%)
Query: 318 TFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPA------- 370
+R LC ++G +IG+GG II+ L+ +T I+V E V G E+R++ I P+
Sbjct: 43 VYRYLCPARKIGSIIGRGGEIIKQLRIDTKSKIRVGETVPGCEERVVTIYSPSDETNEYE 102
Query: 371 HPDDRISAPQDAVLRVQTRIAR---AIPDNREQT--VMTRLLVASNQIGCLLGKGGSIIA 425
+ IS QDA+ RV ++ + D+ E + V +LLV S+QIGC++GKGG I+
Sbjct: 103 DSGNYISPAQDALFRVHDKVIAEDLQVEDDSEGSPQVTAKLLVPSDQIGCIIGKGGQIVQ 162
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLR------HHFF 479
+R +GA IRIL + +P CA ++E+V I+GE +++AL+QI +RL H
Sbjct: 163 NIRSETGAVIRILKDEHLPPCALSSDELVQISGEAAVLKKALYQIASRLHDNPSRSQHLL 222
Query: 480 RDAFPSI 486
A P++
Sbjct: 223 VSAVPNV 229
>gi|356568682|ref|XP_003552539.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 543
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 156/495 (31%), Positives = 246/495 (49%), Gaps = 78/495 (15%)
Query: 5 LTPSKRPHDDDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIMFRVLCPVSKIDGVIGKD 64
++ KR H +H++ + K+++ ++ S +FR LCPV KI VIG+
Sbjct: 6 ISYGKRSH---SHSDSDAGSKNKRRNPAADDSSSSLITADDTVFRYLCPVRKIGSVIGRG 62
Query: 65 GEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEAS 124
G+++ Q+ DT IR+ + + G DER+V I +S EE +
Sbjct: 63 GDIVKQLRADTKAKIRIGDALPGCDERVVTIHSSS---------------------EETN 101
Query: 125 VADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKS 184
DE+ + S Q AL V +R++ + + D+ N +
Sbjct: 102 HFDETGDL--------------------VSPAQDALFRVHQRVIAEDAREDEDDERNHVT 141
Query: 185 SKFVLRLLVLSTQVGCLLGKGGCVIKQI-------------DKLPTCALASDEVVQITGE 231
+K LLV S Q+GC++GKGG +++ I D+LP CAL++DE+VQI+GE
Sbjct: 142 AK----LLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDDRLPPCALSNDELVQISGE 197
Query: 232 VDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDH------SVSSQGAPYATGHR 285
V+KAL I+ Q+ DN R + G V+ Y
Sbjct: 198 AAVVKKALFQIAAQIRDNPSRSQHLLASAVPGGYAAGGPGAGAPIMGVAPFVGAYGGYKG 257
Query: 286 DVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQE 345
D D + P+ R + S + R +C +GGVIGKGGAII ++Q+
Sbjct: 258 DTGDWSRSLYPA----------PRDEASMREFSVRFVCPTGNIGGVIGKGGAIINQIRQD 307
Query: 346 TGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIP-DNREQTVMT 404
+G IKV + + +D LI+IS +D S +A +R+Q R + + D+ + T
Sbjct: 308 SGATIKVDSSATEGDDCLIIISMKEFFEDSFSPTIEAAVRLQPRCSEKVERDSGIVSFTT 367
Query: 405 RLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQ 464
RLLV +++IGCL+GKGG+I+ EMR+L+ A IRIL K+ +PK ASE++E+V I+G+ + +
Sbjct: 368 RLLVPTSRIGCLIGKGGTIVTEMRRLTKANIRILSKENLPKIASEDDEMVQISGDLDVAK 427
Query: 465 EALFQITTRLRHHFF 479
+AL Q TRLR + F
Sbjct: 428 DALVQALTRLRANLF 442
>gi|115479947|ref|NP_001063567.1| Os09g0498600 [Oryza sativa Japonica Group]
gi|113631800|dbj|BAF25481.1| Os09g0498600 [Oryza sativa Japonica Group]
gi|215695028|dbj|BAG90219.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 398
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 142/372 (38%), Positives = 201/372 (54%), Gaps = 36/372 (9%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
+ FR++C +E VG +IGKGG+ IR+L+ ETG IK++E S +E+R+IVIS + +
Sbjct: 26 IVFRMICLNEMVGSIIGKGGSTIRALQSETGASIKIIEPNSDSEERVIVISAHENSEMMH 85
Query: 377 SAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIR 436
S QDAVLRV +RI+ + D + V RLLV S IGCLLGKGGSIIAEMRK++GA IR
Sbjct: 86 SPAQDAVLRVHSRISESSMD-KSSAVTARLLVPSQHIGCLLGKGGSIIAEMRKITGAGIR 144
Query: 437 ILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFF----------------R 480
I G +QIP+CA N+E+V + G F+++Q+AL IT R+R
Sbjct: 145 IFGNEQIPRCAQRNDELVQVTGSFQSIQDALLHITGRIRDVIIPMKPHPGGGMPPYPPGG 204
Query: 481 DAFPSINR----PLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPG 536
+A P R P +PT P PSF R + P M + P H + +G P
Sbjct: 205 NAPPHHPRQEPAPPHPTGGMPPYPMPSFRADRPMGPFDMVDHRPPPPHSMEHMGADRMPY 264
Query: 537 SF--------HPHDDH---SAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVG 585
S+ P D SA+ P +MP+ P P + G + + V
Sbjct: 265 SYGCEQGGGPRPFLDQPSPSAWAPEAPNSEAPRNMPETVP--PADFRK--GAVAGTNQVA 320
Query: 586 PPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQT 645
P V++PR + I G +G+ L +I+++S A IT+ PKPG ++II G P+QT
Sbjct: 321 TPSNATEVIIPRKYIGFICGANGSDLAEIKKMSGATITVHHPKPGDANALVIICGDPDQT 380
Query: 646 HAAQSLIQAFVM 657
AQSL+ AF+
Sbjct: 381 KKAQSLLHAFIF 392
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 115/459 (25%), Positives = 177/459 (38%), Gaps = 139/459 (30%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
I+FR++C + +IGK G + + +TG +I++ E S S+ER++VI A +
Sbjct: 26 IVFRMICLNEMVGSIIGKGGSTIRALQSETGASIKIIEPNSDSEERVIVISAHE------ 79
Query: 106 ENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFE 165
NSE S Q A+L V
Sbjct: 80 ------------------------------------------NSEMMHSPAQDAVLRVHS 97
Query: 166 RMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDK----------- 214
R +++ KSS RLLV S +GCLLGKGG +I ++ K
Sbjct: 98 R---------ISESSMDKSSAVTARLLVPSQHIGCLLGKGGSIIAEMRKITGAGIRIFGN 148
Query: 215 --LPTCALASDEVVQITGEVDTVRKALKLISHQLLD--------------------NSPR 252
+P CA +DE+VQ+TG +++ AL I+ ++ D N+P
Sbjct: 149 EQIPRCAQRNDELVQVTGSFQSIQDALLHITGRIRDVIIPMKPHPGGGMPPYPPGGNAPP 208
Query: 253 DH---ESIPGNPTG--PSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVL 307
H E P +PTG P +P+P P+ D+ D H P P P E
Sbjct: 209 HHPRQEPAPPHPTGGMPPYPMPSFRADRPMGPF-----DMVD-HRPPP---PHSMEHMGA 259
Query: 308 DRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVIS 367
DR + + C E+ GG R + EA + R + +
Sbjct: 260 DR-------MPYSYGC--EQGGGP--------RPFLDQPSPSAWAPEAPNSEAPRNMPET 302
Query: 368 GPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEM 427
P P D +V T P N + ++ R IG + G GS +AE+
Sbjct: 303 VP--PADFRKGAVAGTNQVAT------PSNATEVIIPR-----KYIGFICGANGSDLAEI 349
Query: 428 RKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEA 466
+K+SGA I + PK N +V+I G+ + ++A
Sbjct: 350 KKMSGATITV----HHPKPGDAN-ALVIICGDPDQTKKA 383
>gi|53749469|gb|AAU90323.1| KH domain containing protein [Solanum demissum]
Length = 533
Score = 215 bits (547), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 163/519 (31%), Positives = 256/519 (49%), Gaps = 80/519 (15%)
Query: 9 KRPHDDDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIMFRVLCPVSKIDGVIGKDGEMM 68
KR + +++ +G ++ E + + P +FR LCP KI +IG G++
Sbjct: 10 KRMQSESDYSRSDGSKRRTPT----DEKESNSIGPEDTVFRYLCPTGKIGSIIGVGGDIA 65
Query: 69 SQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASVADE 128
Q+ +T IR+ ET+ G +ER+V I + G EE +V+++
Sbjct: 66 KQLRTETNSKIRISETIPGCEERVVTIYS---------------------GSEETNVSED 104
Query: 129 SDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSKFV 188
+ G ++ S Q AL V +R++ E D++ +
Sbjct: 105 T----------GDLI----------SPAQDALFRVHDRVL---AEDLRMDEDLEDHQQIT 141
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQI-------------DKLPTCALASDEVVQITGEVDTV 235
+R+LV S Q+GC++GKGG VI+ + + LP CAL SDE++QITGE V
Sbjct: 142 VRMLVPSDQIGCVIGKGGQVIQNLRSETGAQIRVLSSEHLPPCALNSDELLQITGEGAVV 201
Query: 236 RKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMP 295
+KAL ++ +L DN R + +P S+ GA + H A +
Sbjct: 202 KKALYQVAARLHDNPSRSQHQLLSSP----------SIFRSGAGFVNPH---AGTQVMGV 248
Query: 296 PSIPKFHESGVLDRPKPSPEILTF--RLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVM 353
S+ + S D S + F RL+C E VG VIGKGG II+ L+QE+G IKV
Sbjct: 249 TSLMGPYASYKSDGRSKSSSVKEFAVRLVCPTENVGAVIGKGGGIIKQLRQESGASIKVD 308
Query: 354 EAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIA-RAIPDNREQTVMTRLLVASNQ 412
A + +D +I +S +D+ S DA +R+Q R + + ++ + + TRLLV S++
Sbjct: 309 SAAAEGDDCIIFVSAKEAFEDQ-SPTIDATMRLQPRSSEKTEKESGDAILTTRLLVPSSR 367
Query: 413 IGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITT 472
+GCL+GKGGSII EMR + A IR+L K+ +PK ASE++E+V I G+ AL Q+
Sbjct: 368 VGCLIGKGGSIINEMRNSTRASIRVLSKENLPKVASEDDEMVQITGDANVATNALLQVLM 427
Query: 473 RLRHHFF--RDAFPSINRPLNPTFLDQVSPFPSFIGRRE 509
RLR + F +FP+ + L+ + P S G R+
Sbjct: 428 RLRANTFEMEGSFPAFSPGLSYVPMSASMPDGSRYGNRD 466
>gi|356529691|ref|XP_003533422.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
Length = 611
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 194/648 (29%), Positives = 301/648 (46%), Gaps = 113/648 (17%)
Query: 40 KSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASD 99
K PG I FR++C S + G+IG G ++SQ+ ++T I E+++S +++R++++ S
Sbjct: 44 KVLPGQIAFRLVCHASIVGGLIGSSGSIVSQLRRETACKIHCEDSLSSAEDRVILVIGSV 103
Query: 100 NKKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKA 159
+ ++ G L DG E E S Q+A
Sbjct: 104 SPRK------------------------------------GLQLGDG--GEVEVSSAQEA 125
Query: 160 LLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKL---- 215
++ VFER+ +E E V S F +LL ++Q+G ++GKGG I I
Sbjct: 126 IVRVFERVWGLEAEKGVNSNRAVNSEVFS-KLLAHTSQIGAVVGKGGKNITAIRNSTGAK 184
Query: 216 ------PTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLP 269
P CA +E+V ITG + V+KAL +SH L D P +P + + P+
Sbjct: 185 IRVCPPPQCATKDEELVLITGGILAVKKALISVSHCLQDCPPLCK--VPVSSSIPTVSSF 242
Query: 270 DHSVSSQGAP-YATGHRDVADIH-LPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDER 327
D S S A + + + + L + +ES D E++ FRLLC +
Sbjct: 243 DRSSSDPNAELFPRLNSLLTSMEGLSIYERTTNSNESSNRDSKGGEHEVV-FRLLCSNNV 301
Query: 328 VGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQ 387
G VIGK GAI+R+L+ +TG I +S +R++ IS + S QDAV+ V
Sbjct: 302 AGSVIGKRGAIVRALESKTGASIIFAAPLSEHAERIVTISAIESLESCNSPAQDAVILV- 360
Query: 388 TRIARAIPD----------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRI 437
AR I D + E V RLLVA++ + G G +I E+R+++GA I+I
Sbjct: 361 --FARIIEDHIGKGFLQVSSMESPVTARLLVATSTVNSWSGNEGQVILELREVTGADIQI 418
Query: 438 LGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHF-----FRDAFPSINRPLNP 492
L + +P AS+++ VV I GE+ VQ AL++IT+R+R + +A P N +N
Sbjct: 419 LHGESVPNGASDDDVVVQITGEYRCVQNALYKITSRIRDNLSPNEAVTEARPKSNWKVNK 478
Query: 493 TFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHH-- 550
D V P +S +F P G F P + A +H
Sbjct: 479 ---DPVKGKP-------------FSRGKSAF----------PSGRFLPRN---AGVHAET 509
Query: 551 IHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGAC 610
I + G ++ + L G M F + V ++V + + GEDG
Sbjct: 510 ILQNG------ELHTDLSENLERGRGNM----FATVTNTTVEIIVSEHVFGSVYGEDGGN 559
Query: 611 LKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMS 658
L +IRQIS A +T+ DP G + ++ISGTP+QT AAQSL+QAF+ +
Sbjct: 560 LDRIRQISGATVTVYDPSVGTSGGKVVISGTPDQTLAAQSLLQAFIQT 607
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 89/378 (23%), Positives = 145/378 (38%), Gaps = 88/378 (23%)
Query: 32 DYSENQPSKSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDER 91
+ S N+ SK ++FR+LC + VIGK G ++ + TG +I +S ER
Sbjct: 277 NESSNRDSKGGEHEVVFRLLCSNNVAGSVIGKRGAIVRALESKTGASIIFAAPLSEHAER 336
Query: 92 LVVIEASDNKKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEK 151
+V I A E+LE+
Sbjct: 337 IVTISA-------IESLESC---------------------------------------- 349
Query: 152 ETSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQ 211
S Q A++LVF R++E + + Q ++ S RLLV ++ V G G VI +
Sbjct: 350 -NSPAQDAVILVFARIIE-DHIGKGFLQVSSMESPVTARLLVATSTVNSWSGNEGQVILE 407
Query: 212 I-------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIP 258
+ + +P A D VVQITGE V+ AL I+ ++ DN P
Sbjct: 408 LREVTGADIQILHGESVPNGASDDDVVVQITGEYRCVQNALYKITSRIRDNLS------P 461
Query: 259 GNPTGPSHPLPDHSVSS---QGAPYATGHRDV---------ADIHLPMPPSIPKFHE--S 304
+ P + V+ +G P++ G A +H + H S
Sbjct: 462 NEAVTEARPKSNWKVNKDPVKGKPFSRGKSAFPSGRFLPRNAGVHAETILQNGELHTDLS 521
Query: 305 GVLDRPK----PSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTE 360
L+R + + T ++ + G V G+ G + ++Q +G + V + GT
Sbjct: 522 ENLERGRGNMFATVTNTTVEIIVSEHVFGSVYGEDGGNLDRIRQISGATVTVYDPSVGTS 581
Query: 361 DRLIVISGPAHPDDRISA 378
+VISG PD ++A
Sbjct: 582 GGKVVISGT--PDQTLAA 597
>gi|357112139|ref|XP_003557867.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 542
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 187/571 (32%), Positives = 280/571 (49%), Gaps = 113/571 (19%)
Query: 17 HTEPNGKEKSQKLAGDYSENQPSKSF----------PGGIMFRVLCPVSKIDGVIGKDGE 66
H +GK S DYSEN K P ++R LC KI +IG+ GE
Sbjct: 6 HRNSHGKRHS-----DYSENGGGKRRNPGDDTYAPGPDDTVYRYLCTSRKIGSIIGRGGE 60
Query: 67 MMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASVA 126
+ Q+ DT IR+ E+V G DER++ I +S + T E+
Sbjct: 61 IAKQLRTDTQAKIRIGESVPGCDERVITIFSSSRETNTIED------------------- 101
Query: 127 DESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKS-S 185
+E + Q AL V E+++ + D+EN + +
Sbjct: 102 ----------------------TEDKVCPAQDALFRVHEKLIA---DDGPGDEENEEGLA 136
Query: 186 KFVLRLLVLSTQVGCLLGKGGCVIKQI-------------DKLPTCALASDEVVQITGEV 232
+ +RLLV S Q+GC++GKGG +I+ I ++LP C ++ DE++QI+G+
Sbjct: 137 QVTVRLLVPSDQIGCIIGKGGHIIQGIRSDTGSQIRVLSNERLPACGISGDELLQISGDP 196
Query: 233 DTVRKALKLISHQLLDNSPRD-HESIP--------GNPTGPSHPLPDHSVSSQGAPYATG 283
VRKAL +S +L DN R H P G+ G S P ++ +PY
Sbjct: 197 LVVRKALLQVSSRLHDNPSRSQHLQAPSLMQPYPVGSRNGSSSTAPVVGIAPMVSPYGGY 256
Query: 284 HRD-VADIHLPMPPSI--PKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIR 340
D V D PSI P+ +S D + RLLC VGGVIGKGG II+
Sbjct: 257 KGDMVGDW-----PSIYQPRREDSSAKD--------FSLRLLCAASDVGGVIGKGGGIIK 303
Query: 341 SLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIA-RAIPDNRE 399
++QE+G IKV ++ S +D +I +S +D +S DA +R+Q + + + P++ E
Sbjct: 304 QIRQESGAFIKV-DSSSAEDDCIITVSAKEFFEDPVSPTIDATVRLQPKCSEKTDPESGE 362
Query: 400 QTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGE 459
+ TRLLV+++QIGCL+GKGGSII E+R+ S A IRIL K+ +PK ASE+EE+V I+G+
Sbjct: 363 PSYTTRLLVSTSQIGCLIGKGGSIITEIRRTSRANIRILSKENVPKVASEDEEMVQISGD 422
Query: 460 FEAVQEALFQITTRLRHHFF-RDAFPSINRPLNPT--FLDQVSPFPSFIGRRELSPPGMY 516
E + AL QITTRL+ +FF R+ S +P+ P +S P ++GR
Sbjct: 423 LEVARHALVQITTRLKANFFEREGALSGFQPVIPYHPMPASISDEPKYLGR--------- 473
Query: 517 SNFGPSFHKFDAVGGPPPPGSFHPHDDHSAF 547
+ P+ H + GG P D ++ +
Sbjct: 474 -DTKPAGHDYPYSGGYRASEDMLPVDSYANY 503
>gi|225452863|ref|XP_002283766.1| PREDICTED: KH domain-containing protein At4g18375 [Vitis vinifera]
gi|296082939|emb|CBI22240.3| unnamed protein product [Vitis vinifera]
Length = 548
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 171/496 (34%), Positives = 255/496 (51%), Gaps = 84/496 (16%)
Query: 9 KRPHDDDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIMFRVLCPVSKIDGVIGKDGEMM 68
KR H ++ + G ++ + GD + P P ++R LCP KI +IG+ GE++
Sbjct: 10 KRAHSQSDYGDNGGNKR--RNPGD--DRDPFTIEPEDTVYRYLCPGRKIGSIIGRGGEIV 65
Query: 69 SQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASVADE 128
Q+ DT IR+ ETV G +ER+V I +S + E + D+
Sbjct: 66 KQLRVDTKSKIRIGETVPGCEERVVTIYSSSD---------------------ETNAFDD 104
Query: 129 SDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSKFV 188
SD S Q AL V +R+V EV +++ ++S+
Sbjct: 105 SDTF--------------------VSPAQDALFRVHDRVVS----EEVHGEDSEEASQVT 140
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQI-------------DKLPTCALASDEVVQITGEVDTV 235
+RLLV S Q+GC++GKGG +I+ I D LP+CAL+SDE+VQI+GE V
Sbjct: 141 VRLLVPSDQIGCVIGKGGQIIQSIRSESGAQVRILKDDHLPSCALSSDELVQISGEPSLV 200
Query: 236 RKALKLISHQLLDNSPRDH----ESIP------GNPTGPSHPLPDHSVSSQGAPYATGHR 285
RKAL I+ +L DN R ++P G+ GP+ P ++ Y
Sbjct: 201 RKALYQIASRLHDNPSRSQHLLASAVPTGYSSGGSLMGPTSGAPIMGLAPLVGTYGGYRG 260
Query: 286 DVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQE 345
D D + S P R + S + + RL+C +GGVIGKGG II ++QE
Sbjct: 261 DSGDWSRSLY-SAP---------RDEASSKEFSLRLVCPIGNIGGVIGKGGVIINQIRQE 310
Query: 346 TGCDIKV-MEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIP-DNREQTVM 403
+G IKV + + +D LI IS +D S +A +R+Q R + + D+ +
Sbjct: 311 SGAAIKVDSTSAAEADDCLIAISAKEFFEDTFSPTIEAAVRLQPRCSEKVERDSGIVSFT 370
Query: 404 TRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAV 463
TRLLV +++IGCL+GKGG+II EMRKL+ A IRIL K+ +PK ASE++E+V I G+ +
Sbjct: 371 TRLLVPTSRIGCLIGKGGAIITEMRKLTKANIRILSKENLPKVASEDDEMVQIAGDLDVA 430
Query: 464 QEALFQITTRLRHHFF 479
++AL Q+TTRLR + F
Sbjct: 431 KDALIQVTTRLRANLF 446
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 107/189 (56%), Gaps = 17/189 (8%)
Query: 314 PEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPA--- 370
PE +R LC ++G +IG+GG I++ L+ +T I++ E V G E+R++ I +
Sbjct: 40 PEDTVYRYLCPGRKIGSIIGRGGEIVKQLRVDTKSKIRIGETVPGCEERVVTIYSSSDET 99
Query: 371 ----HPDDRISAPQDAVLRVQTRIARAI---PDNREQT-VMTRLLVASNQIGCLLGKGGS 422
D +S QDA+ RV R+ D+ E + V RLLV S+QIGC++GKGG
Sbjct: 100 NAFDDSDTFVSPAQDALFRVHDRVVSEEVHGEDSEEASQVTVRLLVPSDQIGCVIGKGGQ 159
Query: 423 IIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLR------H 476
II +R SGA +RIL D +P CA ++E+V I+GE V++AL+QI +RL
Sbjct: 160 IIQSIRSESGAQVRILKDDHLPSCALSSDELVQISGEPSLVRKALYQIASRLHDNPSRSQ 219
Query: 477 HFFRDAFPS 485
H A P+
Sbjct: 220 HLLASAVPT 228
>gi|113205451|gb|AAW28569.2| KH domain containing protein, putative [Solanum demissum]
Length = 600
Score = 212 bits (539), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 163/519 (31%), Positives = 255/519 (49%), Gaps = 80/519 (15%)
Query: 9 KRPHDDDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIMFRVLCPVSKIDGVIGKDGEMM 68
KR + +++ +G ++ E + + P +FR LCP KI +IG G++
Sbjct: 10 KRMQSESDYSRSDGSKRRTPT----DEKESNSIGPEDTVFRYLCPTGKIGSIIGVGGDIA 65
Query: 69 SQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASVADE 128
Q+ +T IR+ ET+ G +ER+V I + G EE +V+++
Sbjct: 66 KQLRTETNSKIRISETIPGCEERVVTIYS---------------------GSEETNVSED 104
Query: 129 SDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSKFV 188
+ G ++ S Q AL V +R++ E D++ +
Sbjct: 105 T----------GDLI----------SPAQDALFRVHDRVL---AEDLRMDEDLEDHQQIT 141
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQI-------------DKLPTCALASDEVVQITGEVDTV 235
+R+LV S Q+GC++GKGG VI+ + + LP CAL SDE++QITGE V
Sbjct: 142 VRMLVPSDQIGCVIGKGGQVIQNLRSETGAQIRVLSSEHLPPCALNSDELLQITGEGAVV 201
Query: 236 RKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMP 295
+KAL ++ +L DN R + +P S+ GA H A +
Sbjct: 202 KKALYQVAARLHDNPSRSQHQLLSSP----------SIFRSGAGLVNPH---AGTQVMGV 248
Query: 296 PSIPKFHESGVLDRPKPSPEILTF--RLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVM 353
S+ + S D S + F RL+C E VG VIGKGG II+ L+QE+G IKV
Sbjct: 249 TSLMGPYASYKSDGRSRSSSVKEFAVRLVCPTENVGAVIGKGGGIIKQLRQESGASIKVD 308
Query: 354 EAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIA-RAIPDNREQTVMTRLLVASNQ 412
A + +D +I +S +D+ S DA +R+Q R + + ++ + + TRLLV S++
Sbjct: 309 SAAAEGDDCIIFVSAKEAFEDQ-SPTIDATMRLQPRSSEKTEKESGDAILTTRLLVPSSR 367
Query: 413 IGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITT 472
+GCL+GKGGSII EMR + A IR+L K+ +PK ASE++E+V I G+ AL Q+
Sbjct: 368 VGCLIGKGGSIINEMRNSTRASIRVLSKENLPKVASEDDEMVQITGDANVAANALLQVLM 427
Query: 473 RLRHHFF--RDAFPSINRPLNPTFLDQVSPFPSFIGRRE 509
RLR + F +FP+ + L+ + P S G R+
Sbjct: 428 RLRANTFEMEGSFPAFSPGLSYVPMSASMPDGSRYGNRD 466
>gi|115453243|ref|NP_001050222.1| Os03g0376800 [Oryza sativa Japonica Group]
gi|18921324|gb|AAL82529.1|AC084766_15 putative nucleic acid binding protein [Oryza sativa Japonica Group]
gi|108708431|gb|ABF96226.1| KH domain-containing protein, putative, expressed [Oryza sativa
Japonica Group]
gi|108708432|gb|ABF96227.1| KH domain-containing protein, putative, expressed [Oryza sativa
Japonica Group]
gi|113548693|dbj|BAF12136.1| Os03g0376800 [Oryza sativa Japonica Group]
gi|125586438|gb|EAZ27102.1| hypothetical protein OsJ_11034 [Oryza sativa Japonica Group]
gi|215686826|dbj|BAG89676.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215695345|dbj|BAG90536.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215704897|dbj|BAG94925.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 542
Score = 212 bits (539), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 184/556 (33%), Positives = 281/556 (50%), Gaps = 108/556 (19%)
Query: 17 HTEPNGKEKSQKLAGDYSENQPSKSF----------PGGIMFRVLCPVSKIDGVIGKDGE 66
H +GK S DY+EN K P ++R LCP KI +IG+ GE
Sbjct: 6 HRNSHGKRHS-----DYAENGGGKRRNPGDDTYAPGPDDTVYRYLCPSRKIGSIIGRGGE 60
Query: 67 MMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASVA 126
+ Q+ DT IR+ E+VSG DER++ I +S + T
Sbjct: 61 IAKQMRADTQAKIRIGESVSGCDERVITIFSSSRETNT---------------------- 98
Query: 127 DESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKS-S 185
L+D +E + Q AL V E++ + ++ ++E+ + +
Sbjct: 99 ----------------LVD---AEDKVCPAQDALFRVHEKL---SIDDDIGNEESDEGLA 136
Query: 186 KFVLRLLVLSTQVGCLLGKGGCVIKQI-------------DKLPTCALASDEVVQITGEV 232
+ +RLLV S Q+GC++GKGG +I+ I + LP CA++ DE++QI+G+
Sbjct: 137 QVTVRLLVPSDQIGCIIGKGGHIIQGIRSDTGAHIRVLSNENLPACAISGDELLQISGDS 196
Query: 233 DTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAP----------YAT 282
VRKAL +S +L DN R + + T P +P+ H SS AP Y
Sbjct: 197 TVVRKALLQVSSRLHDNPSRSQHLLASSMTQP-YPVGSHLGSSSTAPVVGITPLISSYGG 255
Query: 283 GHRDVADIHLPMPPSI--PKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIR 340
DVA PSI P+ ES S + + RLLC VGGVIGKGG II+
Sbjct: 256 YKGDVAGDW----PSIYQPRREES--------SAKEFSLRLLCAASNVGGVIGKGGGIIK 303
Query: 341 SLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIA-RAIPDNRE 399
++QE+G IKV ++ + +D +I +S +D +S +A + +Q R + + P++
Sbjct: 304 QIRQESGAFIKV-DSSNTEDDCIITVSAKEFFEDPVSPTINAAVHLQPRCSEKTDPESAI 362
Query: 400 QTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGE 459
+ TRLLV++++IGCL+GKGGSII E+R+ S A IRIL K+ +PK A+E+EE+V I+G+
Sbjct: 363 PSYTTRLLVSTSRIGCLIGKGGSIITEIRRTSRANIRILSKENVPKVAAEDEEMVQISGD 422
Query: 460 FEAVQEALFQITTRLRHHFFR-----DAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPG 514
+ V+ AL QITTRL+ +FF FP + P +P + VS P ++G R+ P G
Sbjct: 423 LDVVRHALLQITTRLKANFFEREGALSGFPPVI-PYHPLPVG-VSEGPKYLG-RDTKPLG 479
Query: 515 MYSNFGPSFHKFDAVG 530
+ + D +G
Sbjct: 480 HDYPYSSGYRGSDDIG 495
>gi|125544080|gb|EAY90219.1| hypothetical protein OsI_11787 [Oryza sativa Indica Group]
Length = 542
Score = 211 bits (537), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 185/564 (32%), Positives = 284/564 (50%), Gaps = 121/564 (21%)
Query: 17 HTEPNGKEKSQKLAGDYSENQPSKSF----------PGGIMFRVLCPVSKIDGVIGKDGE 66
H +GK S DY+EN K P ++R LCP KI +IG+ GE
Sbjct: 6 HRNSHGKRHS-----DYAENGGGKRRNPGDDTYAPGPDDTVYRYLCPSRKIGSIIGRGGE 60
Query: 67 MMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASVA 126
+ Q+ DT IR+ E+VSG DER++ I +S + T
Sbjct: 61 IAKQMRADTQAKIRIGESVSGCDERVITIFSSSRETNT---------------------- 98
Query: 127 DESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKS-S 185
L+D +E + Q AL V E++ + ++ ++E+ + +
Sbjct: 99 ----------------LVD---AEDKVCPAQDALFRVHEKL---SIDDDIGNEESDEGLA 136
Query: 186 KFVLRLLVLSTQVGCLLGKGGCVIKQI-------------DKLPTCALASDEVVQITGEV 232
+ +RLLV S Q+GC++GKGG +I+ I + LP CA++ DE++QI+G+
Sbjct: 137 QVTVRLLVPSDQIGCIIGKGGHIIQGIRSDTGAHIRVLSNENLPACAISGDELLQISGDS 196
Query: 233 DTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAP----------YAT 282
VRKAL +S +L DN R + + T P +P+ H SS AP Y
Sbjct: 197 TVVRKALLQVSSRLHDNPSRSQHLLASSMTQP-YPVGSHLGSSSTAPVVGITPLISSYGG 255
Query: 283 GHRDVADIHLPMPPSI--PKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIR 340
DVA PSI P+ ES S + + RLLC VGGVIGKGG II+
Sbjct: 256 YKGDVAGDW----PSIYQPRREES--------SAKEFSLRLLCAASNVGGVIGKGGGIIK 303
Query: 341 SLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIA-RAIPDNRE 399
++QE+G IKV ++ + +D +I +S +D +S +A + +Q R + + P++
Sbjct: 304 QIRQESGAFIKV-DSSNTEDDCIITVSAKEFFEDPVSPTINAAVHLQPRCSEKTDPESAI 362
Query: 400 QTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGE 459
+ TRLLV++++IGCL+GKGGSII E+R+ S A IRIL K+ +PK A+E+EE+V I+G+
Sbjct: 363 PSYTTRLLVSTSRIGCLIGKGGSIITEIRRTSRANIRILSKENVPKVAAEDEEMVQISGD 422
Query: 460 FEAVQEALFQITTRLRHHFFR-----DAFPSI--NRPL------NPTFLDQVS------- 499
+ V+ AL QITTRL+ +FF FP + PL P +L + +
Sbjct: 423 LDVVRHALLQITTRLKANFFEREGALSGFPPVIPYHPLPVGVSEGPKYLGRDTKPLGHDY 482
Query: 500 PFPS-FIGRRELSPPGMYSNFGPS 522
P+ S + G ++SP Y+++G S
Sbjct: 483 PYSSGYRGSDDISPIDSYASYGSS 506
>gi|356572762|ref|XP_003554535.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 548
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 166/499 (33%), Positives = 245/499 (49%), Gaps = 90/499 (18%)
Query: 9 KRPHDDDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIMFRVLCPVSKIDGVIGKDGEMM 68
KRPH +H NG K + D + ++R +CP KI VIG+ GE++
Sbjct: 10 KRPHSQSDHD--NGPNKRRNHGDDREQFVIDLE---DTVYRYVCPGRKIGSVIGRGGEIV 64
Query: 69 SQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASVADE 128
Q+ +T IR+ ETV G +ER+V I S +DE
Sbjct: 65 KQLRVETKAKIRIGETVPGCEERVVTI---------------------------YSPSDE 97
Query: 129 SDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSKFV 188
+ N E N S Q AL V +R+V E DQ++ +
Sbjct: 98 T-NAVEGGGNY-------------VSPAQDALFKVHDRVV---AEDFHGDQDDDGGQQVT 140
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQI-------------DKLPTCALASDEVVQITGEVDTV 235
+LLV S Q+GC++GKGG +++ I D LP CAL+SDE+VQITG+ V
Sbjct: 141 AKLLVPSDQIGCVIGKGGSIVQNIRSETGAQIRILKDDHLPLCALSSDELVQITGDASVV 200
Query: 236 RKALKLISHQLLDNSPRDH----ESIPG------NPTGPSHPLPDHSVSSQGAPYATGHR 285
+KAL I+ +L DN R ++PG + GP P ++ Y
Sbjct: 201 KKALCQIASRLHDNPSRSQHLLTSAVPGVYPAGGSLIGPGAGAPIVGIAPLVGAYGGYKG 260
Query: 286 DVADIHLPMPP----SIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRS 341
D D PP S P R + S + + RL+C +GGVIGKGG II
Sbjct: 261 DTGD----WPPRSMYSAP---------RDEASTKEFSVRLVCPTGNIGGVIGKGGMIINQ 307
Query: 342 LKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIP-DNREQ 400
++QE+G IKV + + ++ LI IS ++ S +A +R+Q R + + D+
Sbjct: 308 IRQESGATIKVDSSTTEGDECLIAISTKEFFEETFSPTIEAAVRLQPRCSEKVERDSGII 367
Query: 401 TVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEF 460
+ TRLLV +++IGCL+GKGGSII EMR+L+ A IRI+ K+ +PK ASE++E+V I+G+
Sbjct: 368 SFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRIISKENLPKIASEDDEMVQISGDL 427
Query: 461 EAVQEALFQITTRLRHHFF 479
+ ++AL + TRLR + F
Sbjct: 428 DIAKDALVHVLTRLRANLF 446
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 105/190 (55%), Gaps = 18/190 (9%)
Query: 315 EILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHP-- 372
E +R +C ++G VIG+GG I++ L+ ET I++ E V G E+R++ I P+
Sbjct: 40 EDTVYRYVCPGRKIGSVIGRGGEIVKQLRVETKAKIRIGETVPGCEERVVTIYSPSDETN 99
Query: 373 -----DDRISAPQDAVLRVQTRIA-----RAIPDNREQTVMTRLLVASNQIGCLLGKGGS 422
+ +S QDA+ +V R+ D+ Q V +LLV S+QIGC++GKGGS
Sbjct: 100 AVEGGGNYVSPAQDALFKVHDRVVAEDFHGDQDDDGGQQVTAKLLVPSDQIGCVIGKGGS 159
Query: 423 IIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLR------H 476
I+ +R +GA IRIL D +P CA ++E+V I G+ V++AL QI +RL
Sbjct: 160 IVQNIRSETGAQIRILKDDHLPLCALSSDELVQITGDASVVKKALCQIASRLHDNPSRSQ 219
Query: 477 HFFRDAFPSI 486
H A P +
Sbjct: 220 HLLTSAVPGV 229
>gi|125532489|gb|EAY79054.1| hypothetical protein OsI_34164 [Oryza sativa Indica Group]
gi|125575260|gb|EAZ16544.1| hypothetical protein OsJ_32017 [Oryza sativa Japonica Group]
Length = 769
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 186/615 (30%), Positives = 285/615 (46%), Gaps = 124/615 (20%)
Query: 6 TPSKRPHDDDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIMFRVLCPVSKIDGVIGKDG 65
T KRPH + + +GK K +L + + S S P ++R+LCPV KI V+G+ G
Sbjct: 20 TSRKRPHFNSD----DGKRK--RLNSRHDDGTIS-SEPIETIYRILCPVKKIGSVLGRGG 72
Query: 66 EMMSQISQDTGVTIRVEETVSGSDERLVVI-EASDNKKETSENLEASIERSENNGREEAS 124
+++ + T IRV +++ G+DER+++I S +E ++N+
Sbjct: 73 DIVKALRDTTKAKIRVADSIPGADERVIIIFNYSSQTEEAAQNIST-------------- 118
Query: 125 VADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEP-ETEVADQENTK 183
DG K Q ALL + +++ E + +++
Sbjct: 119 --------------------DGFEDMKPHCFAQDALLKIHDKIAADEDLHAGIVHEKSEN 158
Query: 184 SSKFVLRLLVLSTQVGCLLGKGGCVIKQI-------------DKLPTCALASDEVVQITG 230
+ R+LV QVGCLLGKGG +I+Q+ + LP CAL SDE+VQI+G
Sbjct: 159 VDDVIARILVPGNQVGCLLGKGGSIIQQLRNDTGAGIRVLPSENLPQCALKSDELVQISG 218
Query: 231 EVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQ-GAPYATGHRD--V 287
VRKAL IS +L + +D NP P + D S + AP H + +
Sbjct: 219 SSSLVRKALYEISTRLHQHPRKD------NP--PLEEIIDASTQRKHQAPPQLPHANPML 270
Query: 288 ADIHLPMPPSIPKF--HESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQE 345
+H+ P IP + + L E + ++LC E +G VIGK G +R ++Q+
Sbjct: 271 PHLHVDHSPQIPLLDPYRNRPLQYHSAEAEEFSIKILCASEHIGQVIGKSGGNVRQVEQQ 330
Query: 346 TGCDIKVME-AVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMT 404
TG ++V E + +E+RLIV+S PDD +S +A++ + ++++ + +N T T
Sbjct: 331 TGACVQVKEVGKNASEERLIVVSSQEIPDDPVSPTIEALILLHSKVS-TLAENHHLT--T 387
Query: 405 RLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQ 464
RL+V SN++GC++G+GG +I EMR+ +GA IR+ K PK S +EE+V + G +
Sbjct: 388 RLVVPSNKVGCIIGEGGKVITEMRRRTGAEIRVYSKADKPKYLSFDEELVQVAGLPAIAR 447
Query: 465 EALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSPFPSFIG-------RRELSPPGMYS 517
AL +I +RLR RD S NPT PF F G RE G +
Sbjct: 448 GALTEIASRLRTRTLRDGSSSN----NPT------PFAPFDGPPVDILPNREFMLYGRSA 497
Query: 518 NFGPSFHKFDAVGGPP--PPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVG 575
N P GGPP PP RP + P P G +
Sbjct: 498 NSPP-------YGGPPNDPP---------------YGRPAIDP---------PYGRPAID 526
Query: 576 GPMGFPDFVGPPHRR 590
P G P + PP+RR
Sbjct: 527 PPYGRP-AIDPPYRR 540
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 47/80 (58%)
Query: 583 FVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTP 642
G P V +P S + + G G L +IRQIS A++ + + PG++E+++ I G P
Sbjct: 677 LTGYPGGSVEFRIPNSYLESVIGAGGVNLAEIRQISGARVKLHEAHPGSSESIVEIQGIP 736
Query: 643 EQTHAAQSLIQAFVMSETET 662
+Q AAQSL+Q F+ + + +
Sbjct: 737 DQVKAAQSLLQGFIGASSNS 756
>gi|115482708|ref|NP_001064947.1| Os10g0495000 [Oryza sativa Japonica Group]
gi|22128716|gb|AAM92828.1| putative RNA-binding protein [Oryza sativa Japonica Group]
gi|110289325|gb|ABB47821.2| KH domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|113639556|dbj|BAF26861.1| Os10g0495000 [Oryza sativa Japonica Group]
gi|215694845|dbj|BAG90036.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 762
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 186/615 (30%), Positives = 285/615 (46%), Gaps = 124/615 (20%)
Query: 6 TPSKRPHDDDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIMFRVLCPVSKIDGVIGKDG 65
T KRPH + + +GK K +L + + S S P ++R+LCPV KI V+G+ G
Sbjct: 13 TSRKRPHFNSD----DGKRK--RLNSRHDDGTIS-SEPIETIYRILCPVKKIGSVLGRGG 65
Query: 66 EMMSQISQDTGVTIRVEETVSGSDERLVVI-EASDNKKETSENLEASIERSENNGREEAS 124
+++ + T IRV +++ G+DER+++I S +E ++N+
Sbjct: 66 DIVKALRDTTKAKIRVADSIPGADERVIIIFNYSSQTEEAAQNIST-------------- 111
Query: 125 VADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEP-ETEVADQENTK 183
DG K Q ALL + +++ E + +++
Sbjct: 112 --------------------DGFEDMKPHCFAQDALLKIHDKIAADEDLHAGIVHEKSEN 151
Query: 184 SSKFVLRLLVLSTQVGCLLGKGGCVIKQI-------------DKLPTCALASDEVVQITG 230
+ R+LV QVGCLLGKGG +I+Q+ + LP CAL SDE+VQI+G
Sbjct: 152 VDDVIARILVPGNQVGCLLGKGGSIIQQLRNDTGAGIRVLPSENLPQCALKSDELVQISG 211
Query: 231 EVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQ-GAPYATGHRD--V 287
VRKAL IS +L + +D NP P + D S + AP H + +
Sbjct: 212 SSSLVRKALYEISTRLHQHPRKD------NP--PLEEIIDASTQRKHQAPPQLPHANPML 263
Query: 288 ADIHLPMPPSIPKF--HESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQE 345
+H+ P IP + + L E + ++LC E +G VIGK G +R ++Q+
Sbjct: 264 PHLHVDHSPQIPLLDPYRNRPLQYHSAEAEEFSIKILCASEHIGQVIGKSGGNVRQVEQQ 323
Query: 346 TGCDIKVME-AVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMT 404
TG ++V E + +E+RLIV+S PDD +S +A++ + ++++ + +N T T
Sbjct: 324 TGACVQVKEVGKNASEERLIVVSSQEIPDDPVSPTIEALILLHSKVS-TLAENHHLT--T 380
Query: 405 RLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQ 464
RL+V SN++GC++G+GG +I EMR+ +GA IR+ K PK S +EE+V + G +
Sbjct: 381 RLVVPSNKVGCIIGEGGKVITEMRRRTGAEIRVYSKADKPKYLSFDEELVQVAGLPAIAR 440
Query: 465 EALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSPFPSFIG-------RRELSPPGMYS 517
AL +I +RLR RD S NPT PF F G RE G +
Sbjct: 441 GALTEIASRLRTRTLRDGSSSN----NPT------PFAPFDGPPVDILPNREFMLYGRSA 490
Query: 518 NFGPSFHKFDAVGGPP--PPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVG 575
N P GGPP PP RP + P P G +
Sbjct: 491 NSPP-------YGGPPNDPP---------------YGRPAIDP---------PYGRPAID 519
Query: 576 GPMGFPDFVGPPHRR 590
P G P + PP+RR
Sbjct: 520 PPYGRP-AIDPPYRR 533
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 47/80 (58%)
Query: 583 FVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTP 642
G P V +P S + + G G L +IRQIS A++ + + PG++E+++ I G P
Sbjct: 670 LTGYPGGSVEFRIPNSYLESVIGAGGVNLAEIRQISGARVKLHEAHPGSSESIVEIQGIP 729
Query: 643 EQTHAAQSLIQAFVMSETET 662
+Q AAQSL+Q F+ + + +
Sbjct: 730 DQVKAAQSLLQGFIGASSNS 749
>gi|110289326|gb|AAP54423.2| KH domain containing protein, expressed [Oryza sativa Japonica
Group]
Length = 677
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 186/615 (30%), Positives = 285/615 (46%), Gaps = 124/615 (20%)
Query: 6 TPSKRPHDDDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIMFRVLCPVSKIDGVIGKDG 65
T KRPH + + +GK K +L + + S S P ++R+LCPV KI V+G+ G
Sbjct: 13 TSRKRPHFNSD----DGKRK--RLNSRHDDGTIS-SEPIETIYRILCPVKKIGSVLGRGG 65
Query: 66 EMMSQISQDTGVTIRVEETVSGSDERLVVI-EASDNKKETSENLEASIERSENNGREEAS 124
+++ + T IRV +++ G+DER+++I S +E ++N+
Sbjct: 66 DIVKALRDTTKAKIRVADSIPGADERVIIIFNYSSQTEEAAQNIST-------------- 111
Query: 125 VADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEP-ETEVADQENTK 183
DG K Q ALL + +++ E + +++
Sbjct: 112 --------------------DGFEDMKPHCFAQDALLKIHDKIAADEDLHAGIVHEKSEN 151
Query: 184 SSKFVLRLLVLSTQVGCLLGKGGCVIKQI-------------DKLPTCALASDEVVQITG 230
+ R+LV QVGCLLGKGG +I+Q+ + LP CAL SDE+VQI+G
Sbjct: 152 VDDVIARILVPGNQVGCLLGKGGSIIQQLRNDTGAGIRVLPSENLPQCALKSDELVQISG 211
Query: 231 EVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQ-GAPYATGHRD--V 287
VRKAL IS +L + +D NP P + D S + AP H + +
Sbjct: 212 SSSLVRKALYEISTRLHQHPRKD------NP--PLEEIIDASTQRKHQAPPQLPHANPML 263
Query: 288 ADIHLPMPPSIPKF--HESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQE 345
+H+ P IP + + L E + ++LC E +G VIGK G +R ++Q+
Sbjct: 264 PHLHVDHSPQIPLLDPYRNRPLQYHSAEAEEFSIKILCASEHIGQVIGKSGGNVRQVEQQ 323
Query: 346 TGCDIKVME-AVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMT 404
TG ++V E + +E+RLIV+S PDD +S +A++ + ++++ + +N T T
Sbjct: 324 TGACVQVKEVGKNASEERLIVVSSQEIPDDPVSPTIEALILLHSKVS-TLAENHHLT--T 380
Query: 405 RLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQ 464
RL+V SN++GC++G+GG +I EMR+ +GA IR+ K PK S +EE+V + G +
Sbjct: 381 RLVVPSNKVGCIIGEGGKVITEMRRRTGAEIRVYSKADKPKYLSFDEELVQVAGLPAIAR 440
Query: 465 EALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSPFPSFIG-------RRELSPPGMYS 517
AL +I +RLR RD S NPT PF F G RE G +
Sbjct: 441 GALTEIASRLRTRTLRDGSSSN----NPT------PFAPFDGPPVDILPNREFMLYGRSA 490
Query: 518 NFGPSFHKFDAVGGPP--PPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVG 575
N P GGPP PP RP + P P G +
Sbjct: 491 NSPP-------YGGPPNDPP---------------YGRPAIDP---------PYGRPAID 519
Query: 576 GPMGFPDFVGPPHRR 590
P G P + PP+RR
Sbjct: 520 PPYGRP-AIDPPYRR 533
>gi|242045198|ref|XP_002460470.1| hypothetical protein SORBIDRAFT_02g028920 [Sorghum bicolor]
gi|241923847|gb|EER96991.1| hypothetical protein SORBIDRAFT_02g028920 [Sorghum bicolor]
Length = 371
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 142/376 (37%), Positives = 200/376 (53%), Gaps = 39/376 (10%)
Query: 321 LLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQ 380
++ +E VG +IGKGG+ IR+L+ ETG IK++E V+ +++R++ IS + D S Q
Sbjct: 1 MIILNEMVGSIIGKGGSTIRALQSETGACIKILELVADSDERVVAISARENSDMMHSPAQ 60
Query: 381 DAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGK 440
DAV+RV +RI+ A D R RLLV S IGCLLGKGGSII EMRK++GA IRI G
Sbjct: 61 DAVVRVYSRISEASMD-RSSPTPARLLVPSQHIGCLLGKGGSIITEMRKITGASIRIFGN 119
Query: 441 DQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSP 500
+QIP+CA N+E+V + G F+++Q+AL IT R+R PS P P V
Sbjct: 120 EQIPRCAQRNDEMVQVTGSFQSIQDALLHITGRIRDVILPKPHPSGGMPPYPP----VGN 175
Query: 501 FPSFIGRRELSPPGMYSNFG-PSF--HKF--DAVGG--------PPPPGSF-HPHDDHSA 546
P R+E PP ++ + G P + H F DA G PPP S + D
Sbjct: 176 IPVHQSRQEPPPPHLHPSGGMPPYPMHSFRPDAPMGHFETGDHRPPPVHSMEYMGADRMP 235
Query: 547 FMHHIHRPGMPPHM--PDMKPWGPQG-LMEVGGPMGFPDFV-----------------GP 586
+ + + G P + P + W P+ P PD V P
Sbjct: 236 YSYGGEQGGPRPFLEQPSPRTWPPEAPRTNSEAPRNMPDAVLATDLRKGPVASENQVATP 295
Query: 587 PHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTH 646
VV+P + + G G+ +++IRQ+S A IT+ DPKPG T ++++I G PEQT
Sbjct: 296 TSTTTEVVIPCKYIGFVCGNSGSEIEEIRQMSGASITVHDPKPGDTNSIVVICGDPEQTK 355
Query: 647 AAQSLIQAFVMSETET 662
AQSLI AF+ +T
Sbjct: 356 KAQSLIHAFIFCGLQT 371
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 110/433 (25%), Positives = 165/433 (38%), Gaps = 106/433 (24%)
Query: 57 IDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSE 116
+ +IGK G + + +TG I++ E V+ SDER+V I A +
Sbjct: 8 VGSIIGKGGSTIRALQSETGACIKILELVADSDERVVAISARE----------------- 50
Query: 117 NNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEV 176
NS+ S Q A++ V+ R+ E +
Sbjct: 51 -------------------------------NSDMMHSPAQDAVVRVYSRISEASMD--- 76
Query: 177 ADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDK-------------LPTCALASD 223
+SS RLLV S +GCLLGKGG +I ++ K +P CA +D
Sbjct: 77 ------RSSPTPARLLVPSQHIGCLLGKGGSIITEMRKITGASIRIFGNEQIPRCAQRND 130
Query: 224 EVVQITGEVDTVRKALKLISHQLLDN-SPRDHESIPGNPTGPSHPLPDHSVSSQGAPYAT 282
E+VQ+TG +++ AL I+ ++ D P+ H S P P +P H S Q P
Sbjct: 131 EMVQVTGSFQSIQDALLHITGRIRDVILPKPHPSGGMPPYPPVGNIPVHQ-SRQEPPPPH 189
Query: 283 GHRDVADIHLPM---PPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAII 339
H PM P P H RP P + + + D G+ G
Sbjct: 190 LHPSGGMPPYPMHSFRPDAPMGHFETGDHRPPP---VHSMEYMGADRMPYSYGGEQGGPR 246
Query: 340 RSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQ---DAVLRVQTRIARAIPD 396
L+Q + P P AP+ DAVL R +
Sbjct: 247 PFLEQPSPRTWP-----------------PEAPRTNSEAPRNMPDAVLATDLRKGPVASE 289
Query: 397 NREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEV 453
N+ T T +++ IG + G GS I E+R++SGA I + PK N +
Sbjct: 290 NQVATPTSTTTEVVIPCKYIGFVCGNSGSEIEEIRQMSGASITV----HDPKPGDTN-SI 344
Query: 454 VLINGEFEAVQEA 466
V+I G+ E ++A
Sbjct: 345 VVICGDPEQTKKA 357
>gi|357112153|ref|XP_003557874.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 538
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 168/493 (34%), Positives = 251/493 (50%), Gaps = 87/493 (17%)
Query: 20 PNGKEKSQKLAGDYSENQPSKS----------FPGGIMFRVLCPVSKIDGVIGKDGEMMS 69
P + K DY+EN K P ++R LC KI +IG+ GE+
Sbjct: 4 PGHRNSHGKRYSDYAENGGGKRRNPGDDTYAPCPDDTVYRYLCASRKIGSIIGRGGEIAK 63
Query: 70 QISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASVADES 129
Q+ DT IR+ E+V G DER++ I +S + T E+
Sbjct: 64 QLRTDTQAKIRIGESVPGCDERVITIFSSSRETNTVED---------------------- 101
Query: 130 DNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKS-SKFV 188
+E + Q AL V E+++ + D+EN + ++ +
Sbjct: 102 -------------------TEDKVCPAQDALFRVHEKLIT---DDGPGDEENEEGLAQVI 139
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQI-------------DKLPTCALASDEVVQITGEVDTV 235
+RLLV S Q+GC++GKGG +I+ I + LP CA++ DE++QI+G+ V
Sbjct: 140 VRLLVPSDQIGCIIGKGGHIIQGIRSDTGSHIRVLSTEHLPACAISGDELLQISGDPLVV 199
Query: 236 RKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMP 295
RKAL +S +L DN R + + T P +P+ SS P V I PM
Sbjct: 200 RKALLQVSSRLHDNPSRSQHLLASSLTQP-YPVGSRHGSSSTTP-------VVGI-APMV 250
Query: 296 PSIPKFHESGVLDRP--------KPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETG 347
+ V D P + S + + RLLC VGGVIGKGG II+ ++QE+G
Sbjct: 251 NPYGGYKGDMVGDWPSIYQPRREESSAKEFSLRLLCAASDVGGVIGKGGGIIKQIRQESG 310
Query: 348 CDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIA-RAIPDNREQTVMTRL 406
IKV ++ S +D +I +S +D IS DA +R+Q R + + P++ E + TRL
Sbjct: 311 AFIKV-DSSSAEDDCIITVSAKEFFEDPISPTIDATVRLQPRCSEKTDPESGEPSYTTRL 369
Query: 407 LVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEA 466
LV++++IGCL+GKGGSII E+R+ S A IRIL K+ +PK ASE+EE+V I+G+ + + A
Sbjct: 370 LVSTSRIGCLIGKGGSIITEIRRTSRANIRILSKENVPKVASEDEEMVQISGDLDVAKHA 429
Query: 467 LFQITTRLRHHFF 479
L QITTRL+ +FF
Sbjct: 430 LVQITTRLKANFF 442
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 120/218 (55%), Gaps = 19/218 (8%)
Query: 308 DRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVIS 367
D P P+ +R LC ++G +IG+GG I + L+ +T I++ E+V G ++R+I I
Sbjct: 31 DTYAPCPDDTVYRYLCASRKIGSIIGRGGEIAKQLRTDTQAKIRIGESVPGCDERVITIF 90
Query: 368 GPAH-------PDDRISAPQDAVLRVQTR-IARAIPDNREQ-----TVMTRLLVASNQIG 414
+ +D++ QDA+ RV + I P + E V+ RLLV S+QIG
Sbjct: 91 SSSRETNTVEDTEDKVCPAQDALFRVHEKLITDDGPGDEENEEGLAQVIVRLLVPSDQIG 150
Query: 415 CLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRL 474
C++GKGG II +R +G++IR+L + +P CA +E++ I+G+ V++AL Q+++RL
Sbjct: 151 CIIGKGGHIIQGIRSDTGSHIRVLSTEHLPACAISGDELLQISGDPLVVRKALLQVSSRL 210
Query: 475 RHHFFRDAFPSINRPLNPTFLDQVSPFPSFIGRRELSP 512
+ PS ++ L + L Q P S G +P
Sbjct: 211 HDN------PSRSQHLLASSLTQPYPVGSRHGSSSTTP 242
>gi|195655947|gb|ACG47441.1| nucleic acid binding protein [Zea mays]
gi|414870927|tpg|DAA49484.1| TPA: nucleic acid binding protein [Zea mays]
Length = 769
Score = 208 bits (530), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 156/497 (31%), Positives = 248/497 (49%), Gaps = 61/497 (12%)
Query: 10 RPHDDDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIMFRVLCPVSKIDGVIGKDGEMMS 69
R + T N + +K ++ S P ++R+LCPV KI V+G+ G+++
Sbjct: 7 RRSNSKKRTHSNSDDGKRKRLNTRHDDTSMFSEPIETIYRILCPVKKIGSVLGRGGDIVK 66
Query: 70 QISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASVADES 129
+ ++T IRV +++ G+DER+++I N+ E ++ EA+ E++
Sbjct: 67 ALREETKAKIRVADSIPGADERVIIIFNYQNEPEPTD--EAAEEKNS------------- 111
Query: 130 DNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVL 189
DGL + K Q ALL + +++V E EVA+ E ++S+ V
Sbjct: 112 ---------------DGLGNFKSHCFAQDALLKIHDKIVSDEIHDEVANDEKSESADDVT 156
Query: 190 -RLLVLSTQVGCLLGKGGCVIKQI-------------DKLPTCALASDEVVQITGEVDTV 235
R+LV QVGCLLGKGG +I+Q+ + LP CAL SDE+VQI+G V
Sbjct: 157 ARILVQGNQVGCLLGKGGSIIQQLRSNTGAGIRVLPSENLPQCALKSDELVQISGAPSLV 216
Query: 236 RKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRD--VADIHLP 293
RKAL IS +L + P P + D S + H + +H
Sbjct: 217 RKALYEISTRLHQH--------PRKENRPLEEIIDASTQRKRESPTLQHEYSMLPHLHSD 268
Query: 294 MPPSIPKF--HESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIK 351
P IP + SG P E + R+LC E +G VIGK GA +R ++Q+TG IK
Sbjct: 269 HTPPIPLLDPYRSGP-QYPVTETEEFSIRILCASELIGSVIGKSGANVRRVEQQTGARIK 327
Query: 352 VMEA-VSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVAS 410
V E + +RLI+IS P + IS +A++ + +++ P + + TRL+V S
Sbjct: 328 VQEIDKDASGERLIIISSNEIPAEPISPAIEALILLHDKVS--APSEKHHS-STRLVVPS 384
Query: 411 NQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
+++GC++G+GG +I +MR+ +GA IR+ K PK S ++E+V + G + AL +I
Sbjct: 385 SKVGCIIGEGGKVITDMRRRTGAEIRVYSKADKPKYLSFDDELVQVAGPPTIARGALTEI 444
Query: 471 TTRLRHHFFRDAFPSIN 487
+RLR RD + N
Sbjct: 445 ASRLRTRTLRDTSTANN 461
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 180/369 (48%), Gaps = 81/369 (21%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVI---SGPAHPDDR 375
+R+LC +++G V+G+GG I+++L++ET I+V +++ G ++R+I+I P D
Sbjct: 45 YRILCPVKKIGSVLGRGGDIVKALREETKAKIRVADSIPGADERVIIIFNYQNEPEPTDE 104
Query: 376 ISA---------------PQDAVLRVQTRI-ARAIPD---NREQT-----VMTRLLVASN 411
+ QDA+L++ +I + I D N E++ V R+LV N
Sbjct: 105 AAEEKNSDGLGNFKSHCFAQDALLKIHDKIVSDEIHDEVANDEKSESADDVTARILVQGN 164
Query: 412 QIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQIT 471
Q+GCLLGKGGSII ++R +GA IR+L + +P+CA +++E+V I+G V++AL++I+
Sbjct: 165 QVGCLLGKGGSIIQQLRSNTGAGIRVLPSENLPQCALKSDELVQISGAPSLVRKALYEIS 224
Query: 472 TRLRHHFFRDAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGG 531
TRL H ++ NRPL +D + +R+ P + +
Sbjct: 225 TRLHQHPRKE-----NRPLE-EIIDAST-------QRKRESPTLQHEY------------ 259
Query: 532 PPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPW--GPQGLMEVGGPMGFPDFVGPPHR 589
+ + H+H PP +P + P+ GPQ +P
Sbjct: 260 --------------SMLPHLHSDHTPP-IPLLDPYRSGPQ----------YP-VTETEEF 293
Query: 590 RVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITD-PKPGATETVIIISGTPEQTHAA 648
+ ++ L+ + G+ GA ++++ Q + A+I + + K + E +IIIS
Sbjct: 294 SIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIIISSNEIPAEPI 353
Query: 649 QSLIQAFVM 657
I+A ++
Sbjct: 354 SPAIEALIL 362
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 37/186 (19%)
Query: 504 FIGRRELSPPG--MYSNFGPS--FHKFDAVGGPPP---PGSFHPHDDHSAFMHHIHRPGM 556
+ +RE P G M+++ PS + ++ A P P +F P DH HH +R +
Sbjct: 574 YFSKREY-PSGSPMFTSNAPSAAYERYAAPTRFPTREFPSAFSPGVDH--MPHHSYRDHV 630
Query: 557 PPHMPDMKPWGPQGLMEVGGPMG-------FPDFVGPPHRR---------------VPVV 594
P + +G ++G G + + G H R + +
Sbjct: 631 P-----TDSYSSRGTQQLGITRGGNSDAYDYTEAAGQIHGREDYREPTSATGFLSTIELR 685
Query: 595 VPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQA 654
+P S + I G G L +IRQ+S A++ + + G++E+V+ I GT +Q AAQSL+Q
Sbjct: 686 IPNSSLGSIVGAGGVNLAEIRQVSGARLRLHEAHAGSSESVVEIQGTLDQAKAAQSLLQG 745
Query: 655 FVMSET 660
F+ + +
Sbjct: 746 FISANS 751
Score = 38.9 bits (89), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 13 DDDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQIS 72
D ++TE G+ ++ DY E + F I R+ P S + ++G G +++I
Sbjct: 652 DAYDYTEAAGQIHGRE---DYREPTSATGFLSTIELRI--PNSSLGSIVGAGGVNLAEIR 706
Query: 73 QDTGVTIRVEETVSGSDERLVVIEASDNKKETSENL 108
Q +G +R+ E +GS E +V I+ + ++ + +++L
Sbjct: 707 QVSGARLRLHEAHAGSSESVVEIQGTLDQAKAAQSL 742
>gi|414870928|tpg|DAA49485.1| TPA: hypothetical protein ZEAMMB73_398324 [Zea mays]
Length = 770
Score = 208 bits (530), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 156/497 (31%), Positives = 248/497 (49%), Gaps = 61/497 (12%)
Query: 10 RPHDDDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIMFRVLCPVSKIDGVIGKDGEMMS 69
R + T N + +K ++ S P ++R+LCPV KI V+G+ G+++
Sbjct: 7 RRSNSKKRTHSNSDDGKRKRLNTRHDDTSMFSEPIETIYRILCPVKKIGSVLGRGGDIVK 66
Query: 70 QISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASVADES 129
+ ++T IRV +++ G+DER+++I N+ E ++ EA+ E++
Sbjct: 67 ALREETKAKIRVADSIPGADERVIIIFNYQNEPEPTD--EAAEEKNS------------- 111
Query: 130 DNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVL 189
DGL + K Q ALL + +++V E EVA+ E ++S+ V
Sbjct: 112 ---------------DGLGNFKSHCFAQDALLKIHDKIVSDEIHDEVANDEKSESADDVT 156
Query: 190 -RLLVLSTQVGCLLGKGGCVIKQI-------------DKLPTCALASDEVVQITGEVDTV 235
R+LV QVGCLLGKGG +I+Q+ + LP CAL SDE+VQI+G V
Sbjct: 157 ARILVQGNQVGCLLGKGGSIIQQLRSNTGAGIRVLPSENLPQCALKSDELVQISGAPSLV 216
Query: 236 RKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRD--VADIHLP 293
RKAL IS +L + P P + D S + H + +H
Sbjct: 217 RKALYEISTRLHQH--------PRKENRPLEEIIDASTQRKRESPTLQHEYSMLPHLHSD 268
Query: 294 MPPSIPKF--HESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIK 351
P IP + SG P E + R+LC E +G VIGK GA +R ++Q+TG IK
Sbjct: 269 HTPPIPLLDPYRSGP-QYPVTETEEFSIRILCASELIGSVIGKSGANVRRVEQQTGARIK 327
Query: 352 VMEA-VSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVAS 410
V E + +RLI+IS P + IS +A++ + +++ P + + TRL+V S
Sbjct: 328 VQEIDKDASGERLIIISSNEIPAEPISPAIEALILLHDKVS--APSEKHHS-STRLVVPS 384
Query: 411 NQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
+++GC++G+GG +I +MR+ +GA IR+ K PK S ++E+V + G + AL +I
Sbjct: 385 SKVGCIIGEGGKVITDMRRRTGAEIRVYSKADKPKYLSFDDELVQVAGPPTIARGALTEI 444
Query: 471 TTRLRHHFFRDAFPSIN 487
+RLR RD + N
Sbjct: 445 ASRLRTRTLRDTSTANN 461
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 180/369 (48%), Gaps = 81/369 (21%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVI---SGPAHPDDR 375
+R+LC +++G V+G+GG I+++L++ET I+V +++ G ++R+I+I P D
Sbjct: 45 YRILCPVKKIGSVLGRGGDIVKALREETKAKIRVADSIPGADERVIIIFNYQNEPEPTDE 104
Query: 376 ISA---------------PQDAVLRVQTRI-ARAIPD---NREQT-----VMTRLLVASN 411
+ QDA+L++ +I + I D N E++ V R+LV N
Sbjct: 105 AAEEKNSDGLGNFKSHCFAQDALLKIHDKIVSDEIHDEVANDEKSESADDVTARILVQGN 164
Query: 412 QIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQIT 471
Q+GCLLGKGGSII ++R +GA IR+L + +P+CA +++E+V I+G V++AL++I+
Sbjct: 165 QVGCLLGKGGSIIQQLRSNTGAGIRVLPSENLPQCALKSDELVQISGAPSLVRKALYEIS 224
Query: 472 TRLRHHFFRDAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGG 531
TRL H ++ NRPL +D + +R+ P + +
Sbjct: 225 TRLHQHPRKE-----NRPLE-EIIDAST-------QRKRESPTLQHEY------------ 259
Query: 532 PPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPW--GPQGLMEVGGPMGFPDFVGPPHR 589
+ + H+H PP +P + P+ GPQ +P
Sbjct: 260 --------------SMLPHLHSDHTPP-IPLLDPYRSGPQ----------YP-VTETEEF 293
Query: 590 RVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITD-PKPGATETVIIISGTPEQTHAA 648
+ ++ L+ + G+ GA ++++ Q + A+I + + K + E +IIIS
Sbjct: 294 SIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIIISSNEIPAEPI 353
Query: 649 QSLIQAFVM 657
I+A ++
Sbjct: 354 SPAIEALIL 362
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 85/187 (45%), Gaps = 38/187 (20%)
Query: 504 FIGRRELSPPG--MYSNFGPS--FHKFDAVGGPPP---PGSFHPHDDHSAFMHHIHRPGM 556
+ +RE P G M+++ PS + ++ A P P +F P DH HH +R +
Sbjct: 574 YFSKREY-PSGSPMFTSNAPSAAYERYAAPTRFPTREFPSAFSPGVDH--MPHHSYRDHV 630
Query: 557 PPHMPDMKPWGPQGLMEVGGPMG-------FPDFVGPPHRR----------------VPV 593
P + +G ++G G + + G H R + +
Sbjct: 631 P-----TDSYSSRGTQQLGITRGGNSDAYDYTEAAGQIHGREDYREPTSATGRFLSTIEL 685
Query: 594 VVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQ 653
+P S + I G G L +IRQ+S A++ + + G++E+V+ I GT +Q AAQSL+Q
Sbjct: 686 RIPNSSLGSIVGAGGVNLAEIRQVSGARLRLHEAHAGSSESVVEIQGTLDQAKAAQSLLQ 745
Query: 654 AFVMSET 660
F+ + +
Sbjct: 746 GFISANS 752
>gi|7671496|emb|CAB89337.1| putative protein [Arabidopsis thaliana]
Length = 568
Score = 208 bits (529), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 186/618 (30%), Positives = 277/618 (44%), Gaps = 147/618 (23%)
Query: 15 DNHTEPNGKEKSQKLA---GDYSENQPSKSFPGG------------IMFRVLCPVSKIDG 59
D+ P+ ++ +K + DY +N SK G +FR LCPV KI
Sbjct: 4 DHRMSPDHRDSHRKRSRPQSDYDDNGGSKRRYRGDDRDSLVIDRDDTVFRYLCPVKKIGS 63
Query: 60 VIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNG 119
VIG+ G+++ Q+ DT IR+ E + G DER++ I
Sbjct: 64 VIGRGGDIVKQLRNDTRSKIRIGEAIPGCDERVITI------------------------ 99
Query: 120 REEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQ 179
S +DE++ DG EK S Q AL + +R+V + +E + +
Sbjct: 100 ---YSPSDETN-----------AFGDG---EKVLSPAQDALFRIHDRVVADDARSEDSPE 142
Query: 180 ENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQID-------------KLPTCALASDEVV 226
+ +LLV S Q+GC+LG+GG +++ I +P CAL SDE++
Sbjct: 143 ---GEKQVTAKLLVPSDQIGCILGRGGQIVQNIRSETGAQIRIVKDRNMPLCALNSDELI 199
Query: 227 QITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATG--- 283
QI+GEV V+KAL I+ +L +N R + + P+ L H+ G P G
Sbjct: 200 QISGEVLIVKKALLQIASRLHENPSRSQNLLSSSGGYPAGSLMSHA----GGPRLVGLAP 255
Query: 284 -----HRDVADIHLPM--PPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGG 336
RD D P+ PP R P RL+ E + VIGKGG
Sbjct: 256 LMGSYGRDAGDWSRPLYQPP------------RNDPPATEFFIRLVSPVENIASVIGKGG 303
Query: 337 AIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIP- 395
A+I L+QET IKV + + D LI IS +D S +AV+R+Q + + +
Sbjct: 304 ALINQLRQETRATIKVDSSRTEGNDCLITISAREVFEDAYSPTIEAVMRLQPKCSDKVER 363
Query: 396 DNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVL 455
D+ + TRLLV S++IGC+LGKGG+II EMR+++ A IRILGK+ +PK AS+++E+V
Sbjct: 364 DSGLVSFTTRLLVPSSRIGCILGKGGAIITEMRRMTKANIRILGKENLPKVASDDDEMVQ 423
Query: 456 IN-----------------------------------GEFEAVQEALFQITTRLRHHFF- 479
+N GE + +EAL QIT+RLR + F
Sbjct: 424 VNFMVLLLKFSLQFLLSRLRYFTWSVNSNSNFDVQISGELDVAKEALIQITSRLRANVFD 483
Query: 480 RDAFPSINRPLNPTFLDQVSP-------FPSFIGRR--ELSP-PGMYSNFGPSFHKFDAV 529
R+ S P+ P V+P + S RR +P PG Y + G S +
Sbjct: 484 REGAVSALMPVLPYV--PVAPDAGDRFDYDSRDSRRLERGNPYPGGYGSSGVSAEGYSPY 541
Query: 530 GGPPPPGSFHPHDDHSAF 547
G P S P+ + +
Sbjct: 542 GAPVGGSSSTPYGVYGGY 559
>gi|308081899|ref|NP_001183640.1| uncharacterized protein LOC100502234 [Zea mays]
gi|238013618|gb|ACR37844.1| unknown [Zea mays]
gi|414867002|tpg|DAA45559.1| TPA: hypothetical protein ZEAMMB73_773291 [Zea mays]
gi|414867003|tpg|DAA45560.1| TPA: hypothetical protein ZEAMMB73_773291 [Zea mays]
gi|414867004|tpg|DAA45561.1| TPA: hypothetical protein ZEAMMB73_773291 [Zea mays]
Length = 541
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 189/591 (31%), Positives = 283/591 (47%), Gaps = 112/591 (18%)
Query: 17 HTEPNGKEKSQKLAGDYSENQPSKSF----------PGGIMFRVLCPVSKIDGVIGKDGE 66
H +GK +S D++EN SK P ++R LC KI +IG+ GE
Sbjct: 4 HRNSHGKRQS-----DFTENGGSKRRNPGDDTYAPGPDDTVYRYLCASRKIGSIIGRGGE 58
Query: 67 MMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASVA 126
+ Q+ +T IR+ E+V G DER+V I ++ K T
Sbjct: 59 IAKQLRTETQAKIRIGESVPGCDERVVTIFSTSRKTNT---------------------- 96
Query: 127 DESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSK 186
+DG +E E Q AL V ER+ E +E S +
Sbjct: 97 -----------------IDG--AEDEVCPAQDALFRVHERLASDEGLGNEDSEE--ISPQ 135
Query: 187 FVLRLLVLSTQVGCLLGKGGCVIKQI-------------DKLPTCALASDEVVQITGEVD 233
+RLLV S Q+GC++GKGG +I+ I D +P CA++ DE++QI+G+
Sbjct: 136 VTVRLLVPSDQIGCIIGKGGQIIQGIRSETGAQIRVLSNDHIPACAISGDELLQISGDTV 195
Query: 234 TVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLP 293
VRKAL +S +L +N + + + T P +P H S AP V I
Sbjct: 196 VVRKALHQVSSRLHNNPSKSQHLLASSLTQP-YPGSTHLGGSSTAP-------VVGITPV 247
Query: 294 MPP----------SIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLK 343
+PP P ++ R + S + + RLLC VGGVIGKGG II+ ++
Sbjct: 248 IPPYGGYKGDVAGDWPSLYQP---RRDESSAKEFSLRLLCAAANVGGVIGKGGGIIKQIR 304
Query: 344 QETGCDIKVMEAVSGTEDRLIV-ISGPAHPDDRISAPQDAVLRVQTRIA-RAIPDNREQT 401
QE+G IKV + S +D I+ +S +D +S DA +R+Q R + ++ ++ EQ+
Sbjct: 305 QESGALIKVASSNSDPDDDCIITVSAKEFFEDPVSPTIDAAVRLQPRCSEKSDLESAEQS 364
Query: 402 VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFE 461
TRLLV++++IGCL+GKGGSII E+R+ S A +RIL K+ +PK A+E++E+V I G +
Sbjct: 365 YTTRLLVSTSRIGCLIGKGGSIITEIRRTSRANVRILSKENVPKVAAEDDEMVQITGGLD 424
Query: 462 AVQEALFQITTRLRHHFFR-----DAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMY 516
+ AL QI TRL+ +FF AFP + P +P VS P ++G R+ P G Y
Sbjct: 425 VARNALVQIATRLKANFFEREGSLSAFPPVI-PYHP-LPAGVSDEPKYLG-RDTKPVGHY 481
Query: 517 ---SNFGPS-----FHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPH 559
S F S + + GG PG + +S + G+ H
Sbjct: 482 LYSSGFRTSDDTIPSDSYASYGGSQAPG--RGYGAYSGYSARSSNSGLSGH 530
>gi|326490983|dbj|BAK05591.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 688
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 158/554 (28%), Positives = 267/554 (48%), Gaps = 93/554 (16%)
Query: 154 SKVQKALLLVFERMVEVEPETEVADQEN-------TKSSKFVLRLLVLSTQVGCLLGKGG 206
S Q+ALL+V R++E +P+ D E K RL+V VGCLLGKGG
Sbjct: 171 SPAQEALLMVHRRILETQPDDGDEDGEYGPRGKDARDRGKVTTRLIVPRQHVGCLLGKGG 230
Query: 207 CVIKQI--------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPR 252
+I+Q+ +P C S++VVQ+ GE + V+KA+ +IS +L ++ R
Sbjct: 231 KIIEQMRSETKTHIRILPREQNMPRCLSLSEKVVQVVGEGNNVKKAVAIISDRLKESLHR 290
Query: 253 DHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRP-- 310
D P H + SQ Y G + + P P + +G ++ P
Sbjct: 291 DRGPFLRGRNSPEHRI------SQADEYLGGGQQMPAFEEPYP-RFDQIRNNGSMEPPGY 343
Query: 311 ---------KPSPEI----LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS 357
PEI + FR+LC +++ ++G II L+ E G D+++ + ++
Sbjct: 344 EFDSNGSKFNEHPEIPYDEIIFRILCPNDKAISLVGSRDGIIDMLQAEVGVDVRLTDLIA 403
Query: 358 GTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLL 417
G+++R ++I+ PD + Q+A+L +QT I PD ++ + TRLLV S++I C
Sbjct: 404 GSDERTLIITSREGPDHELFPAQEALLHIQTFIVDLGPD-KDNIITTRLLVPSSEIACFE 462
Query: 418 GKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHH 477
G+ GS ++++++ + A ++IL ++++P CA E++E++ I GE A + AL Q+TT+LR +
Sbjct: 463 GRDGS-LSDIQRQTSANVQILPREELPSCALESDELIQIVGEIRAARNALMQVTTKLRSY 521
Query: 478 FFRDAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYS-------------NFGPSFH 524
+R+ P+ + +SP SP G+Y+ S+H
Sbjct: 522 IYRE-MPAPIQIGGINVHGSISPAKG-------SPRGLYAGNDLPMPIYQQAPQMATSWH 573
Query: 525 KFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFV 584
D+ G GSF + S+ + + + P + +EV
Sbjct: 574 SKDS--GLSASGSF---EQGSSINDDMRQSNTKRY---AVPLVTRSTLEV---------- 615
Query: 585 GPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQ 644
V+P+S V + G+ L QI ++S A +T+ + +PG TE V+ ISGTPEQ
Sbjct: 616 ---------VIPQSAVASLSMRAGSKLAQISEMSGASVTLAEERPGVTEKVVRISGTPEQ 666
Query: 645 THAAQSLIQAFVMS 658
AQSL+Q F++S
Sbjct: 667 ADKAQSLLQGFILS 680
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 118/254 (46%), Gaps = 29/254 (11%)
Query: 318 TFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPA--HPDDR 375
+FR+LC + + G + I + + ++G I + G R+I + D R
Sbjct: 110 SFRILCPESKAYGF---PASFINNAQDDSGAIITIHPPFPGDPVRVIETADGTLREADGR 166
Query: 376 ---ISAPQDAVLRVQTRIARAIPDNREQ---------------TVMTRLLVASNQIGCLL 417
S Q+A+L V RI PD+ ++ V TRL+V +GCLL
Sbjct: 167 PPMFSPAQEALLMVHRRILETQPDDGDEDGEYGPRGKDARDRGKVTTRLIVPRQHVGCLL 226
Query: 418 GKGGSIIAEMRKLSGAYIRILGKDQ-IPKCASENEEVVLINGEFEAVQEALFQITTRLRH 476
GKGG II +MR + +IRIL ++Q +P+C S +E+VV + GE V++A+ I+ RL+
Sbjct: 227 GKGGKIIEQMRSETKTHIRILPREQNMPRCLSLSEKVVQVVGEGNNVKKAVAIISDRLKE 286
Query: 477 HFFRDAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPG 536
RD P + +P ++S ++G + P + P F + G PPG
Sbjct: 287 SLHRDRGPFLRGRNSPEH--RISQADEYLGGGQQMP--AFEEPYPRFDQIRNNGSMEPPG 342
Query: 537 SFHPHDDHSAFMHH 550
+ + S F H
Sbjct: 343 -YEFDSNGSKFNEH 355
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 83/384 (21%), Positives = 145/384 (37%), Gaps = 100/384 (26%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
I+FR+LCP K ++G ++ + + GV +R+ + ++GSDER ++I + +
Sbjct: 363 IIFRILCPNDKAISLVGSRDGIIDMLQAEVGVDVRLTDLIAGSDERTLIITSREGP---- 418
Query: 106 ENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFE 165
+ E Q+ALL +
Sbjct: 419 --------------------------------------------DHELFPAQEALLHIQT 434
Query: 166 RMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCV------------IKQID 213
+V++ P+ K + RLLV S+++ C G+ G + I +
Sbjct: 435 FIVDLGPD---------KDNIITTRLLVPSSEIACFEGRDGSLSDIQRQTSANVQILPRE 485
Query: 214 KLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRD------------HESIP--- 258
+LP+CAL SDE++QI GE+ R AL ++ +L R+ H SI
Sbjct: 486 ELPSCALESDELIQIVGEIRAARNALMQVTTKLRSYIYREMPAPIQIGGINVHGSISPAK 545
Query: 259 GNP----TGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPK-------FHESGVL 307
G+P G P+P + Q AP D L S + +S
Sbjct: 546 GSPRGLYAGNDLPMPIY----QQAPQMATSWHSKDSGLSASGSFEQGSSINDDMRQSNTK 601
Query: 308 DRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVIS 367
P T ++ V + + G+ + + + +G + + E G ++++ IS
Sbjct: 602 RYAVPLVTRSTLEVVIPQSAVASLSMRAGSKLAQISEMSGASVTLAEERPGVTEKVVRIS 661
Query: 368 G-PAHPDDRISAPQDAVLRVQTRI 390
G P D S Q +L +Q I
Sbjct: 662 GTPEQADKAQSLLQGFILSIQDDI 685
>gi|413933964|gb|AFW68515.1| hypothetical protein ZEAMMB73_983755 [Zea mays]
Length = 768
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 161/498 (32%), Positives = 246/498 (49%), Gaps = 67/498 (13%)
Query: 9 KRPHDDDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIMFRVLCPVSKIDGVIGKDGEMM 68
KR H + + +GK K +L+ + + S S P ++R+LCP KI V+G+ G+++
Sbjct: 13 KRRHSNSD----DGKRK--RLSSRHDDTSMS-SEPIETIYRILCPAKKIGSVLGRGGDIV 65
Query: 69 SQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASVADE 128
+ ++T IRV +++ G+DER+++I N+ E + DE
Sbjct: 66 KALREETKAKIRVADSIPGADERVIIIFNYQNQPE---------------------LTDE 104
Query: 129 SDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSKFV 188
+ K+ + DGL + K Q ALL + +++V E EVA E+ S
Sbjct: 105 AAEKQ---------ISDGLGNMKPHCFAQDALLKIHDKIVADEIYDEVAHDES--SDDVT 153
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQI-------------DKLPTCALASDEVVQITGEVDTV 235
R+LV QVGCLLGKGG +I+Q+ + LP CAL SDE+VQI+G V
Sbjct: 154 ARILVQGNQVGCLLGKGGSIIQQLRSDTGAGIRVLSSENLPQCALQSDELVQISGAPSLV 213
Query: 236 RKALKLIS---HQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIHL 292
RKAL IS HQ R E I T H P + P+ H L
Sbjct: 214 RKALYEISTRLHQHPRKENRPLEQIIDASTQRKHESPTLQHENPMLPHLHSHHPPPIPLL 273
Query: 293 PMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV 352
S P++ P E + R+LC E +G VIGK GA +R ++Q+TG IKV
Sbjct: 274 DPYRSGPQY--------PVSETEEFSIRILCASELIGSVIGKSGANVRRVEQQTGARIKV 325
Query: 353 MEA-VSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASN 411
E + +RLI++S P + IS +A++ + +++ + + + TRL+V SN
Sbjct: 326 QEIDKDASGERLIIVSSNEIPTEPISPTIEALILLHDKVSAS---SEKHHSSTRLVVPSN 382
Query: 412 QIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQIT 471
++GC+LG+GG +I EMR+ +GA IR+ K PK S +E+V + G + AL +I
Sbjct: 383 KVGCILGEGGQVITEMRRRTGAEIRVYSKADKPKYLSFGDELVQVAGPPAIARGALTEIA 442
Query: 472 TRLRHHFFRDAFPSINRP 489
+RLR RD + N P
Sbjct: 443 SRLRTRTLRDTSTANNPP 460
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 115/196 (58%), Gaps = 29/196 (14%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVI----SGPAHPDD 374
+R+LC +++G V+G+GG I+++L++ET I+V +++ G ++R+I+I + P D+
Sbjct: 45 YRILCPAKKIGSVLGRGGDIVKALREETKAKIRVADSIPGADERVIIIFNYQNQPELTDE 104
Query: 375 RISA--------------PQDAVLRVQTRIA------RAIPDNREQTVMTRLLVASNQIG 414
QDA+L++ +I D V R+LV NQ+G
Sbjct: 105 AAEKQISDGLGNMKPHCFAQDALLKIHDKIVADEIYDEVAHDESSDDVTARILVQGNQVG 164
Query: 415 CLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRL 474
CLLGKGGSII ++R +GA IR+L + +P+CA +++E+V I+G V++AL++I+TRL
Sbjct: 165 CLLGKGGSIIQQLRSDTGAGIRVLSSENLPQCALQSDELVQISGAPSLVRKALYEISTRL 224
Query: 475 RHHFFRDAFPSINRPL 490
H ++ NRPL
Sbjct: 225 HQHPRKE-----NRPL 235
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 86/199 (43%), Gaps = 33/199 (16%)
Query: 484 PSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPS--FHKFDAVGGPPPPGSFHPH 541
P+ + P +P+ P F R S M+++ PS + ++ A P F
Sbjct: 564 PNRSAPRDPS---DAYPVDYFSKREHPSGGPMFTSNAPSAAYERYAA------PTHFPTR 614
Query: 542 DDHSAFMHHIHRPGMPPHMPDMKPWGPQGL-------------MEVGGPM-GFPDFVGPP 587
+ S F H +R MP G Q L E G + G D+ G P
Sbjct: 615 EPPSTFSHRSYRDHMP--TDSYSSRGTQKLDITRDGNSDAYDYTEAAGQIHGLEDYRGLP 672
Query: 588 H------RRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGT 641
+ + +P S + I G G L +IRQIS A++ + + G++E+V+ I GT
Sbjct: 673 SASGRFSSTIELRIPNSSLESIVGVGGVNLAEIRQISGARLRLHEAHAGSSESVVEIQGT 732
Query: 642 PEQTHAAQSLIQAFVMSET 660
+Q AAQSL++ F+ + +
Sbjct: 733 LDQAKAAQSLLEGFISANS 751
>gi|356550877|ref|XP_003543809.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 561
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 162/515 (31%), Positives = 243/515 (47%), Gaps = 91/515 (17%)
Query: 9 KRPHDDDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIMFRVLCPVSKIDGVIGKDGEMM 68
KRPH +H K ++ GD E S ++R +CP KI VIG+ GE++
Sbjct: 10 KRPHSQSDHDNGPNKRRNH---GDDREQFVIDSED--TVYRYVCPGRKIGSVIGRGGEIV 64
Query: 69 SQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASVADE 128
Q+ +T IR+ ETV G +ER+V I ++ E
Sbjct: 65 KQLRVETKAKIRIGETVPGCEERVVTIYGPSDETNAVEG--------------------- 103
Query: 129 SDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSKFV 188
S Q AL V +R+V E DQ++ +
Sbjct: 104 --------------------GGNYVSPAQDALFKVHDRVV---AEDFHGDQDDDGGQQVT 140
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQI-------------DKLPTCALASDEVVQITGEVDTV 235
+LLV S Q+GC++GKGG +++ I D LP CAL+SDE+VQITG+ V
Sbjct: 141 AKLLVPSDQIGCVIGKGGSIVQNIRGETGAQIRILKDDHLPMCALSSDELVQITGDAAVV 200
Query: 236 RKALKLISHQLLDNSPRDHESIP----------GNPTGPSHPLPDHSVSSQGAPYATGHR 285
+KAL I+ +L DN R + G+ GP P ++ Y
Sbjct: 201 KKALYQIASRLHDNPSRSQHLLTSAVSGVYPAGGSLIGPGAGAPIVGIAPLVGSYGGYKG 260
Query: 286 DVADIHLPMPP----SIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRS 341
D D PP S P R + S + + RL+C +GGVIGKGG II
Sbjct: 261 DTGD----WPPRSMYSAP---------RDEASSKEFSVRLVCPTGNIGGVIGKGGMIINQ 307
Query: 342 LKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIP-DNREQ 400
++Q++G IKV + ++ LI IS ++ S +A +R+Q R + + D+
Sbjct: 308 IRQDSGATIKVDSSTIEGDECLIAISTKEFFEETFSPTIEAAVRLQPRCSEKVERDSGII 367
Query: 401 TVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEF 460
+ TRLLV + +IGCL+GKGGSII +MR+L+ A IRI+ K+ +PK A+E++E+V I+G+
Sbjct: 368 SFTTRLLVPTTRIGCLIGKGGSIITDMRRLTKANIRIISKENLPKIANEDDEMVQISGDL 427
Query: 461 EAVQEALFQITTRLRHHFF-RDAFPSINRPLNPTF 494
+ ++AL + TRLR + F R+ S P+ P
Sbjct: 428 DVAKDALVHVLTRLRANLFDREGALSAFLPVLPYL 462
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/338 (30%), Positives = 155/338 (45%), Gaps = 57/338 (16%)
Query: 315 EILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHP-- 372
E +R +C ++G VIG+GG I++ L+ ET I++ E V G E+R++ I GP+
Sbjct: 40 EDTVYRYVCPGRKIGSVIGRGGEIVKQLRVETKAKIRIGETVPGCEERVVTIYGPSDETN 99
Query: 373 -----DDRISAPQDAVLRVQTRIA-----RAIPDNREQTVMTRLLVASNQIGCLLGKGGS 422
+ +S QDA+ +V R+ D+ Q V +LLV S+QIGC++GKGGS
Sbjct: 100 AVEGGGNYVSPAQDALFKVHDRVVAEDFHGDQDDDGGQQVTAKLLVPSDQIGCVIGKGGS 159
Query: 423 IIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDA 482
I+ +R +GA IRIL D +P CA ++E+V I G+ V++AL+QI +RL +
Sbjct: 160 IVQNIRGETGAQIRILKDDHLPMCALSSDELVQITGDAAVVKKALYQIASRLHDN----- 214
Query: 483 FPSINRPLNPTFLDQVSPF-PSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPH 541
PS ++ L + + V P S IG +P VG P GS+ +
Sbjct: 215 -PSRSQHLLTSAVSGVYPAGGSLIGPGAGAP---------------IVGIAPLVGSYGGY 258
Query: 542 DDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVP 601
D W P+ + P D V +V P +
Sbjct: 259 KG------------------DTGDWPPRSMYSA--PR---DEASSKEFSVRLVCPTGNIG 295
Query: 602 IIQGEDGACLKQIRQISDAKITITDPKPGATETVIIIS 639
+ G+ G + QIRQ S A I + E +I IS
Sbjct: 296 GVIGKGGMIINQIRQDSGATIKVDSSTIEGDECLIAIS 333
>gi|357463999|ref|XP_003602281.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355491329|gb|AES72532.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 646
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 177/661 (26%), Positives = 293/661 (44%), Gaps = 129/661 (19%)
Query: 48 FRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSEN 107
+R+LC + GVIGK G ++ I Q TG I V E V+G +ER +IE SD +
Sbjct: 65 YRLLCHDLRAGGVIGKSGSIIKSIRQHTGAWINVHEPVAGDEER--IIEISDTR------ 116
Query: 108 LEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERM 167
R + +GR + S Q+ALLL+ ER+
Sbjct: 117 ------RRDPDGRM-----------------------------PQFSPAQEALLLIHERL 141
Query: 168 VEVEP----ETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI----------- 212
+E +P E + + RL+V VG LLGKGG +I+Q+
Sbjct: 142 LENDPGFEDEEDYGGGRGGGGKRVSSRLVVSKMHVGSLLGKGGKIIEQMRIETKTQIRIL 201
Query: 213 ---DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDH--------------- 254
LP C S+E+VQ+TG++ V+ A +IS +L ++ RD
Sbjct: 202 PRDSYLPRCVSMSEEIVQVTGDIHNVKNAFLVISSRLRESQHRDRSGERGGGGGQFHGRG 261
Query: 255 -----------ESIPGNPTGPSHPLPDHS-VSSQGAPYATGHRDVADIHLPMPP-SIPKF 301
+ +P +G P + S S+ A + + + A I M + P
Sbjct: 262 HSPERFFPPDDDYLPHVSSGSRRPSVERSGFGSRIATTNSRNNNHASISYSMDQGAAPVA 321
Query: 302 HESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTED 361
H+ +P E L FR+LC +RV ++G+ G I+ L+ G D+++ + V G+++
Sbjct: 322 HDE------QPFYEDLIFRILCPVDRVDRIVGESGGILELLQDRVGVDVQISDRVGGSDE 375
Query: 362 RLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGG 421
++++I+ P+D + Q+A+L +QT I D + + TRL+V S+ I CL GK
Sbjct: 376 QMVIITSEEGPNDTMFPAQEALLHIQTHIV----DLSDSIITTRLIVPSSDIECLDGKNA 431
Query: 422 SIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRD 481
S ++E+ + +GA ++IL ++++P C + +E+V I GE EA + + +T +LR + +RD
Sbjct: 432 S-LSEIERSTGASVQILPREELPPCIANTDELVQIVGEIEAARNVILDVTAKLRSYVYRD 490
Query: 482 AFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPH 541
P P+ +P PS E S + + + + +
Sbjct: 491 ILQWDTVP--PS-----APLPSV----EASSSNSMATVAET-------------ATANQN 526
Query: 542 DDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRV-PVVVPRSLV 600
A G M K + + P G V R + VV+P V
Sbjct: 527 MQSVAVALASKESGGSTEMGKQKESDRRDDL----PTGLNRTVSLVTRSILEVVIPEYAV 582
Query: 601 PIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSET 660
P + + + L QI ++S A + + + +P E +I ISGTPEQ QSL+Q F++S
Sbjct: 583 PKLLAKSKSKLAQISELSGANVKLVEDRPDEKEKIIQISGTPEQAERGQSLLQGFILSTQ 642
Query: 661 E 661
E
Sbjct: 643 E 643
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/182 (40%), Positives = 106/182 (58%), Gaps = 18/182 (9%)
Query: 318 TFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAH--PDDR 375
++RLLCHD R GGVIGK G+II+S++Q TG I V E V+G E+R+I IS PD R
Sbjct: 64 SYRLLCHDLRAGGVIGKSGSIIKSIRQHTGAWINVHEPVAGDEERIIEISDTRRRDPDGR 123
Query: 376 I---SAPQDAVLRVQTRIARAIPDNREQ------------TVMTRLLVASNQIGCLLGKG 420
+ S Q+A+L + R+ P ++ V +RL+V+ +G LLGKG
Sbjct: 124 MPQFSPAQEALLLIHERLLENDPGFEDEEDYGGGRGGGGKRVSSRLVVSKMHVGSLLGKG 183
Query: 421 GSIIAEMRKLSGAYIRILGKDQ-IPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFF 479
G II +MR + IRIL +D +P+C S +EE+V + G+ V+ A I++RLR
Sbjct: 184 GKIIEQMRIETKTQIRILPRDSYLPRCVSMSEEIVQVTGDIHNVKNAFLVISSRLRESQH 243
Query: 480 RD 481
RD
Sbjct: 244 RD 245
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 41/63 (65%)
Query: 42 FPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNK 101
F ++FR+LCPV ++D ++G+ G ++ + GV +++ + V GSDE++V+I + +
Sbjct: 327 FYEDLIFRILCPVDRVDRIVGESGGILELLQDRVGVDVQISDRVGGSDEQMVIITSEEGP 386
Query: 102 KET 104
+T
Sbjct: 387 NDT 389
>gi|297791069|ref|XP_002863419.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297309254|gb|EFH39678.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 643
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 201/673 (29%), Positives = 293/673 (43%), Gaps = 133/673 (19%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
+++R+LCP + VIGK G++++ I Q+T I+V + G ER++ I S +K+
Sbjct: 43 VVYRILCPSGVMGSVIGKSGKVINLIRQETRARIKVVDPFPGCSERVITIFCSVTEKKDI 102
Query: 106 ENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFE 165
IE SE LN Q ALL V +
Sbjct: 103 ----IDIEHSE------------------------------LNYSIPLCSAQDALLKVHD 128
Query: 166 RMVEVEPETEVADQENTKSSKFVL---RLLVLSTQVGCLLGKGGCVIKQI---------- 212
+V + ENTK + + RLLV S+Q ++GK G +IK+I
Sbjct: 129 AIV----ASLATAAENTKIDRDDIRECRLLVPSSQCSNVIGKSGSIIKKIRSRTRANVKV 184
Query: 213 ------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSH 266
D TCA+ D +V I+GE ++V+KAL +S + SPR E IP + T
Sbjct: 185 VSKDVSDPSHTCAMDFDNIVLISGESESVKKALFAVSAIMYKVSPR--EQIPLDTTVQEV 242
Query: 267 PL-----PDHSVSSQGAPYAT--------------------GHRDVADIHLPM--PPSIP 299
P D S+ QG Y G+ + A +P+ ++P
Sbjct: 243 PASIIIPSDLSIYPQGGLYPNQDPIFQHGANVSSFIGTLPQGYGESAANPMPVFSASALP 302
Query: 300 KFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSG- 358
H G E L +++C ++G VIGKGG+ I+ ++Q +G I+V ++ +
Sbjct: 303 VVHGFG----GSSKSEKLVIKVICSSSKIGRVIGKGGSTIKGIRQASGSHIEVNDSRANH 358
Query: 359 TEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLG 418
+D +I ++ PDD S +AVL +Q +I D E+ V +LLV S IGC++G
Sbjct: 359 DDDCVITVTATESPDDLKSMAVEAVLLLQEKIN----DEDEEKVKMQLLVPSKVIGCIIG 414
Query: 419 KGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHF 478
K GSII+E+RK + A I I + PKCA N+E+V I+GE V++AL QI RLR
Sbjct: 415 KSGSIISEIRKRTKANIHISKGNNKPKCADPNDELVEISGEVSDVRDALIQIVLRLRDDV 474
Query: 479 FRDAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSF 538
RD IG R PP N F + G P SF
Sbjct: 475 LRD---------------------REIGSRN-QPPARSEN-NNFFSSGSSNTGLALPSSF 511
Query: 539 HPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGG-PMG----------FPDFVG-- 585
A + RP M + G GL G P+G + G
Sbjct: 512 MSSVPQVASVDFDRRPETGSSMSMLPSSG--GLYGYGSFPVGNNSYGSKSSYSSNLYGGL 569
Query: 586 PPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQT 645
P + V +P + V + G G L IR+IS A I I+D K + +ISGTPEQ
Sbjct: 570 PQSTTMEVRIPANAVGKVMGRGGGNLDNIRRISGAMIEISDSKNSHGGRIALISGTPEQK 629
Query: 646 HAAQSLIQAFVMS 658
A++L QAF+MS
Sbjct: 630 RTAENLFQAFIMS 642
>gi|413917022|gb|AFW56954.1| hypothetical protein ZEAMMB73_179405 [Zea mays]
Length = 632
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 196/706 (27%), Positives = 311/706 (44%), Gaps = 137/706 (19%)
Query: 9 KRPHDDDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIMFRVLCPVSKIDGVIGKDGEMM 68
KRP H E +E+ + + Q S + G +++R+LCP S I VIGK G ++
Sbjct: 7 KRP---SQHREYEREERKDQHKRPFPRAQESSNNDGLVLYRILCPDSLIGSVIGKHGNVI 63
Query: 69 SQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASVADE 128
+ I T ++V + G+D+R++++ ++ A+
Sbjct: 64 NAIRHQTSAKVKVVDPYPGADKRVILVYCYVKHRDLD--------------------AEG 103
Query: 129 SDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSKFV 188
DN+ Q ALL V +V+ +++ K S
Sbjct: 104 DDNEP-------------------VCAAQDALLRVHNAIVDALQTLHKNHKDSDKKSTEE 144
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQI----------------DKLPTCALASDEVVQITGEV 232
+LV ++Q ++GK G VIK + D +CA++ D VQITG
Sbjct: 145 ANILVPASQASNVIGKSGAVIKHLRSTSRAFIKVSPKDPSDPTHSCAMSFDNFVQITGGA 204
Query: 233 DTVRKALKLIS-----HQLLDNSPRDHE------------SIPGNPTGPSHPLPDHSVSS 275
+ V+KAL +S H +N P + +P P + PD ++ S
Sbjct: 205 EAVKKALFGVSTIIYKHPSKENIPLETSIPDPTPSIIIPSELPVYPASNFYSAPDAAIPS 264
Query: 276 QGAPYAT--GHRDV------ADIHLPMP------PSIPKFHESGVLDRPKPSPEILTFRL 321
+ R V AD H +P P IP + PK S E L FR+
Sbjct: 265 VHPSMSVLGSTRHVPELAVPADDHGRLPIYQSILPVIPTYSA------PKCSGE-LEFRV 317
Query: 322 LCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQD 381
LC ++G VIG+GGA I++++QE+G I V +A + E+ +I I DD SA +
Sbjct: 318 LCPGGKIGLVIGRGGATIKNIRQESGARIDVDDAKNDKEESIITIISTESTDDVKSAAVE 377
Query: 382 AVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKD 441
AVL +Q +I D+ + + RLLV + IGCL+G+GGSI+ +MRK + A I I D
Sbjct: 378 AVLLLQAKIN----DSEDDRMNLRLLVPNKVIGCLIGRGGSIVNDMRKKTKANILISKGD 433
Query: 442 QIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSPF 501
+ P+ AS ++E+V ++GE + +++AL QI RLR +++ S N +
Sbjct: 434 K-PRRASSSDELVEVSGEADKLRDALVQIILRLREAVLKESVESQNSDRDG--------- 483
Query: 502 PSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPH-- 559
+L+ S +G S P + PH+ A + + R G P
Sbjct: 484 -------QLTVAASDSLYGSSL----------PLPALLPHNQQIAPLGY-DRRGEPERAL 525
Query: 560 --MPDMKPWGPQGLMEV-GGPMGFPDFVGPPHR----RVPVVVPRSLVPIIQGEDGACLK 612
P +G + G G P + + R+ + VP S + + G+ G L
Sbjct: 526 EVFPRTSSYGYSSMQVTDDGYGGLPSYASKAYEEHVPRLEMTVPASGISKVMGKHGTNLD 585
Query: 613 QIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMS 658
IR+IS A I I +PK E + ISGT EQ H+A++LI+AF+MS
Sbjct: 586 NIRKISGAHIEIIEPKSSRHEHIAYISGTSEQRHSAENLIKAFIMS 631
>gi|294462548|gb|ADE76820.1| unknown [Picea sitchensis]
Length = 340
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 131/323 (40%), Positives = 173/323 (53%), Gaps = 20/323 (6%)
Query: 342 LKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIA-RAIPDNREQ 400
++QETG +IKV++ V ++R+IV+S DDRIS +AVL +Q + + ++I + +E
Sbjct: 22 IRQETGANIKVIDQVPDCDERVIVVSSKEFVDDRISPTLEAVLHLQFKTSEKSIEEGKEG 81
Query: 401 TVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEF 460
+ TR LV SN IGCLLGKGGSII+EMRK + A IRI+ KD IPKCA ENEE+V + GE
Sbjct: 82 VITTRFLVPSNSIGCLLGKGGSIISEMRKRTRANIRIMSKDNIPKCAGENEELVQVIGEV 141
Query: 461 EAVQEALFQITTRLRHHFFRDAFPSINR----PLNPTFLDQVSPFPSFIGRRELSPPG-M 515
+ +EAL QI TRLR + F+D N P + + + P F EL G M
Sbjct: 142 DVAREALIQIATRLRSNVFKDQDGGSNAGSVVPPSLSLYGRGVPDSGFGRGDELGSTGRM 201
Query: 516 YSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVG 575
YS PS G S+ + P G
Sbjct: 202 YSL--PSLGLEGTASGRYSSASYGSLGGVQNGGAGGY-GSFSSFSTSRAPAG-------- 250
Query: 576 GPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETV 635
G P V V V +P V I G G+ + QIR+IS AK+ + + KPG T+ V
Sbjct: 251 ---GLPAGVAKSGSTVEVTIPNKSVGSILGRGGSNISQIREISGAKVKLHESKPGGTDRV 307
Query: 636 IIISGTPEQTHAAQSLIQAFVMS 658
+ ISGTPEQTHAAQSL+QAF MS
Sbjct: 308 VEISGTPEQTHAAQSLLQAFAMS 330
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 64/129 (49%), Gaps = 16/129 (12%)
Query: 164 FERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI----------- 212
E ++ ++ +T E K R LV S +GCLLGKGG +I ++
Sbjct: 60 LEAVLHLQFKTSEKSIEEGKEGVITTRFLVPSNSIGCLLGKGGSIISEMRKRTRANIRIM 119
Query: 213 --DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPD 270
D +P CA ++E+VQ+ GEVD R+AL I+ +L N +D + G+ G P P
Sbjct: 120 SKDNIPKCAGENEELVQVIGEVDVAREALIQIATRLRSNVFKDQDG--GSNAGSVVP-PS 176
Query: 271 HSVSSQGAP 279
S+ +G P
Sbjct: 177 LSLYGRGVP 185
>gi|357146815|ref|XP_003574121.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 777
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 173/549 (31%), Positives = 265/549 (48%), Gaps = 98/549 (17%)
Query: 4 PLTPSKRPH---DDDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIMFRVLCPVSKIDGV 60
P T KR H DD N N + ++ P S P ++R+LCP KI V
Sbjct: 11 PSTSRKRTHFNSDDGNRKRLNSRH----------DDGPMSSQPIETVYRILCPGKKIGSV 60
Query: 61 IGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGR 120
+G+ G ++ + ++T IRV +++ G++ER+++I D + ++ + EA+ S N+G
Sbjct: 61 LGRGGHIVKALREETKAKIRVADSIPGAEERVIII--FDYQDQSEQTDEAAQNISNNDGS 118
Query: 121 EEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQE 180
E K Q ALL + +++ E + A E
Sbjct: 119 ENM---------------------------KLQCFAQDALLKIHDKISTHEDPHDGAIHE 151
Query: 181 NTKSSKFVL-RLLVLSTQVGCLLGKGGCVIKQI-------------DKLPTCALASDEVV 226
++++ V R+LV QVGCLLGKGG +I+Q+ LP CAL SDE+V
Sbjct: 152 KSETAADVTARILVPGNQVGCLLGKGGSIIQQLRNDTGAGIRILPSQDLPQCALQSDELV 211
Query: 227 QITGEVDTVRKALKLIS-----HQLLDNSP----------RDHESIPGNPTGPSHPLPDH 271
QI+G VRKAL IS H +N P R ES P PLP
Sbjct: 212 QISGAPSLVRKALYEISTRLHQHPRKENPPLEEIIDASTQRKRESPP--------PLPHE 263
Query: 272 SVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGV 331
++ PY D PMP P + S P P E + R+LC E +G V
Sbjct: 264 NLM---LPYQH-----VDRLPPMPLLDP--YRSRPSQYPVPEAEEFSVRILCASELIGPV 313
Query: 332 IGKGGAIIRSLKQETGCDIKVMEA-VSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRI 390
IGK GA +R ++Q+TG I V E + +RLIV+S P D +S +A++ + +++
Sbjct: 314 IGKSGANVRQVEQQTGARILVQELDKDASGERLIVLSSKEIPGDPVSPAIEALILLHSKV 373
Query: 391 ARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASEN 450
+ + + ++ ++TRL+V S+++GC+LG+GG +I EMR+ GA IR+ K PK S +
Sbjct: 374 SAS---SEKRHLITRLVVPSSKVGCILGEGGKVITEMRRRIGAEIRVYSKADKPKYLSFD 430
Query: 451 EEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSIN-RPLNPTFLDQVSPFPSFIGRRE 509
EE+V + G + ++AL +I +RLR RD N PL P+ + FPS RE
Sbjct: 431 EELVQVAGPPDIARDALTEIASRLRTRTLRDGGSGNNPLPLAPSDGPRGDIFPS----RE 486
Query: 510 LSPPGMYSN 518
+ G +N
Sbjct: 487 FTQNGRPAN 495
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 100/379 (26%), Positives = 180/379 (47%), Gaps = 86/379 (22%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISA 378
+R+LC +++G V+G+GG I+++L++ET I+V +++ G E+R+I+I ++
Sbjct: 48 YRILCPGKKIGSVLGRGGHIVKALREETKAKIRVADSIPGAEERVIIIFDYQDQSEQTDE 107
Query: 379 P-------------------QDAVLRVQTRIAR-------AIPDNREQT--VMTRLLVAS 410
QDA+L++ +I+ AI + E V R+LV
Sbjct: 108 AAQNISNNDGSENMKLQCFAQDALLKIHDKISTHEDPHDGAIHEKSETAADVTARILVPG 167
Query: 411 NQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
NQ+GCLLGKGGSII ++R +GA IRIL +P+CA +++E+V I+G V++AL++I
Sbjct: 168 NQVGCLLGKGGSIIQQLRNDTGAGIRILPSQDLPQCALQSDELVQISGAPSLVRKALYEI 227
Query: 471 TTRLRHHFFRDAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVG 530
+TRL H R NP + + + R+ SPP +
Sbjct: 228 STRLHQH---------PRKENPPLEEIID---ASTQRKRESPPPL--------------- 260
Query: 531 GPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFP-----DFVG 585
PH++ H+ R +PP MP + P+ + P +P +F
Sbjct: 261 ---------PHENLMLPYQHVDR--LPP-MPLLDPYRSR-------PSQYPVPEAEEFS- 300
Query: 586 PPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITD-PKPGATETVIIISGTPEQ 644
V ++ L+ + G+ GA ++Q+ Q + A+I + + K + E +I++S
Sbjct: 301 -----VRILCASELIGPVIGKSGANVRQVEQQTGARILVQELDKDASGERLIVLSSKEIP 355
Query: 645 THAAQSLIQAFVMSETETT 663
I+A ++ ++ +
Sbjct: 356 GDPVSPAIEALILLHSKVS 374
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 43/64 (67%)
Query: 593 VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLI 652
+++P S + + G G L +IRQIS A++ + + PG++E+++ I G P+Q AAQSL+
Sbjct: 691 LMIPNSSLGSVLGAGGVNLAEIRQISGARMKLLEGHPGSSESIMEIQGMPDQVRAAQSLL 750
Query: 653 QAFV 656
Q F+
Sbjct: 751 QGFI 754
>gi|357501947|ref|XP_003621262.1| KH domain-containing protein [Medicago truncatula]
gi|355496277|gb|AES77480.1| KH domain-containing protein [Medicago truncatula]
Length = 571
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 179/523 (34%), Positives = 259/523 (49%), Gaps = 95/523 (18%)
Query: 8 SKRPHD----DDNHTEPNGKEKSQKLAGDYSENQPSKSF---PGGIMFRVLCPVSKIDGV 60
+KR H DDN T N K ++ + E P +F ++R LCPV KI +
Sbjct: 10 NKRSHSHNSVDDNRT--NNKRRNP----NTDETTPRDTFHITQDDTVYRYLCPVRKIGSI 63
Query: 61 IGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGR 120
IG+ GE++ Q+ DT IR+ ETV G DER+V +
Sbjct: 64 IGRGGEIVKQLRLDTKAKIRIGETVPGCDERVVTV------------------------- 98
Query: 121 EEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQE 180
SV+DES N EDS MD L V+ ++ E + VE E D E
Sbjct: 99 --YSVSDES-NDFEDSGEFMCPAMDAL--------VRIHQKVIAEDLRGVEDED--VDME 145
Query: 181 NTKSSKFVL-RLLVLSTQVGCLLGKGGCVIKQI-------------DKLPTCALASDEVV 226
V +LLV S Q+GC++GKGG +++ I D+LP CAL SDE+V
Sbjct: 146 KVDGGDLVTAKLLVASDQIGCVIGKGGQIVQNIRSETGAQIRILKDDRLPLCALNSDELV 205
Query: 227 QITGEVDTVRKALKLISHQLLDNSPRDH----ESIPGNPTGPSHPLPDHSVSSQGAPY-- 280
QI+GE+ V+KAL ++ +L DN R ++PG + H GAP
Sbjct: 206 QISGEIAVVKKALIQVAARLHDNPSRTQHLLTSAVPGVYAASGSMVGSHG----GAPIMG 261
Query: 281 --------ATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVI 332
DV D M P R + S + + R +C +GGVI
Sbjct: 262 MAPIGGGYGGYKGDVVDYPRSMYPG----------SRDEGSVKEFSVRFVCPTANIGGVI 311
Query: 333 GKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIAR 392
GKGG II ++Q++G +IKV + + +D LI IS +D SA +A + +Q R +
Sbjct: 312 GKGGGIINQIRQDSGANIKVDSSATEGDDCLIAISARELFEDPFSATIEAAVLLQPRCSE 371
Query: 393 AIP-DNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENE 451
+ D+ + +RLLV+S++IGCL+GKGGSII EMR+L+ A IRIL K+ +PK A+E++
Sbjct: 372 KVERDSGILSFTSRLLVSSSRIGCLIGKGGSIITEMRRLTKANIRILSKEDLPKIATEDD 431
Query: 452 EVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTF 494
E+V I+GE + ++AL Q+ TRLR + F D S++ L P
Sbjct: 432 EMVQISGELDIAKDALLQVLTRLRANLF-DKERSVSSLLPPVL 473
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 117/238 (49%), Gaps = 25/238 (10%)
Query: 274 SSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIG 333
+S G + H V D P E+ D + + +R LC ++G +IG
Sbjct: 6 TSYGNKRSHSHNSVDDNRTNNKRRNPNTDETTPRDTFHITQDDTVYRYLCPVRKIGSIIG 65
Query: 334 KGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDR-------ISAPQDAVLRV 386
+GG I++ L+ +T I++ E V G ++R++ + + + + DA++R+
Sbjct: 66 RGGEIVKQLRLDTKAKIRIGETVPGCDERVVTVYSVSDESNDFEDSGEFMCPAMDALVRI 125
Query: 387 QTRI----ARAIPD--------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAY 434
++ R + D + V +LLVAS+QIGC++GKGG I+ +R +GA
Sbjct: 126 HQKVIAEDLRGVEDEDVDMEKVDGGDLVTAKLLVASDQIGCVIGKGGQIVQNIRSETGAQ 185
Query: 435 IRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLR------HHFFRDAFPSI 486
IRIL D++P CA ++E+V I+GE V++AL Q+ RL H A P +
Sbjct: 186 IRILKDDRLPLCALNSDELVQISGEIAVVKKALIQVAARLHDNPSRTQHLLTSAVPGV 243
>gi|297794027|ref|XP_002864898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297310733|gb|EFH41157.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 865
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 155/484 (32%), Positives = 239/484 (49%), Gaps = 78/484 (16%)
Query: 244 HQLLDNSPRD-----HESIPGNPTG-PSHPLPDHSVSSQGAPYATGHRDVADIH-LPMPP 296
H+ + PRD ES P + G P +P ++ Q A Y + D H +
Sbjct: 379 HRPFEMVPRDAMGMPFESFPRDAYGRPIETIPQETLRRQSADYLAHRYSILDTHSITTSA 438
Query: 297 SIPKFHESGVLDRPKPSPEI----LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV 352
SI + + P E+ + F++LC E GGVIG GG ++R L ETG I V
Sbjct: 439 SIAN---TASMKPPPSEVEVGNQDVVFKILCSTENAGGVIGSGGKVVRMLHSETGAFINV 495
Query: 353 MEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRI----ARAIPDNREQTVMT-RLL 407
++ E+RLI ++ P +P+ + S Q A++ + +R+ + I DN +T +T RL+
Sbjct: 496 GNTLADCEERLIAVTAPENPECQSSPAQKAIMLLFSRLFELSTKKILDNGPRTSITARLV 555
Query: 408 VASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEAL 467
V ++QIGC+LGKGG I++EMRK +GA I+IL +Q PKC SEN++V+ I GEF V+EA+
Sbjct: 556 VPTSQIGCVLGKGGVIVSEMRKTTGATIQILKVEQNPKCVSENDQVIQITGEFPNVREAI 615
Query: 468 FQITTRLRHHFFRDAFP-SINRPLNPTFLDQV----SPFPSFIGRRE--LSPPGMYS--- 517
F IT+RLR F ++ SI + + +++ S P IG + +PP S
Sbjct: 616 FHITSRLRDSVFSNSMKNSITKSSSALTTERIYHRQSDNPLSIGSHQSVSNPPTNSSSLH 675
Query: 518 -----NFGPSFHKFDAVGGP-----------PPPGSFHPHD------------DHSAFMH 549
+F H P P P F+P DHS H
Sbjct: 676 RRSEDSFLSGSHSSVNYSRPVGTDPYVRPEDPFPDRFNPSAGYSPNFGRRFTMDHSDISH 735
Query: 550 HI-----HRPGMPPHMPDMKPWGPQGLMEVGGPMGFP---DFVGPPHRR-------VPVV 594
H+ PP P P+GL + G + +G H+ V +
Sbjct: 736 HLTEVPSRLWASPP------PAAPRGLSDASGGLSSARAGHALGSGHKSAIVTNTTVEIR 789
Query: 595 VPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQA 654
VP + + + GE G L+Q+RQIS A++ + +P G ++ +I+ISGTP+QT AAQ+L+ A
Sbjct: 790 VPENAMSFVYGEQGYNLEQLRQISGARVIVHEPPLGTSDRIIVISGTPDQTQAAQNLLHA 849
Query: 655 FVMS 658
F+++
Sbjct: 850 FILT 853
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 122/265 (46%), Gaps = 36/265 (13%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI-- 376
FRLLC VG VIGK G +I+ L+Q TG I+V E G+ DR+I I A R+
Sbjct: 47 FRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPFGSPDRVITIIAQADSKSRVKL 106
Query: 377 -------------------SAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLL 417
S Q A+++V +A + TV+ RLL S+ G ++
Sbjct: 107 GVNNNGNAEGEKKEEEVEVSKAQGALIKVFELLA---AEADSDTVVCRLLTESSHAGAVI 163
Query: 418 GKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHH 477
GKGG ++ +RK +G I I + +P CA ++E+V I G AV++AL I+ L++
Sbjct: 164 GKGGQMVGSIRKETGCKISIR-TENLPICADTDDEMVEIEGNAIAVKKALVSISRCLQNC 222
Query: 478 FFRDAFPSI-NRPLNPTFLDQV-SPFPSFIGRRELSPPGMYSNFGPSFHKFDAV---GGP 532
D + NRPL F + P + I +E P + N + D + G
Sbjct: 223 QSIDKVRMVGNRPLEKEFQASLHRPIETII--QESLPRSIEVNPYDYRLRKDEIFPRGTL 280
Query: 533 PPPGSFHPHDDHSAFMHHIHRPGMP 557
P +PHD +HH H +P
Sbjct: 281 ARPSDVNPHDT----LHHRHIEAVP 301
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 100/229 (43%), Gaps = 50/229 (21%)
Query: 44 GGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKE 103
G FR+LCP+S + VIGK G ++ Q+ Q TG IRVEE GS +R++ I A
Sbjct: 43 GHAAFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPFGSPDRVITIIAQ----- 97
Query: 104 TSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLV 163
AD K N G+ + E E SK Q AL+ V
Sbjct: 98 ----------------------ADSKSRVKLGVNNNGNAEGEKKEEEVEVSKAQGALIKV 135
Query: 164 FERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDK--------- 214
FE ++ E +++ V RLL S+ G ++GKGG ++ I K
Sbjct: 136 FE-LLAAEADSDTV----------VCRLLTESSHAGAVIGKGGQMVGSIRKETGCKISIR 184
Query: 215 ---LPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGN 260
LP CA DE+V+I G V+KAL IS L + D + GN
Sbjct: 185 TENLPICADTDDEMVEIEGNAIAVKKALVSISRCLQNCQSIDKVRMVGN 233
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 98/217 (45%), Gaps = 64/217 (29%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
++F++LC GVIG G+++ + +TG I V T++ +ERL+ + A +
Sbjct: 460 VVFKILCSTENAGGVIGSGGKVVRMLHSETGAFINVGNTLADCEERLIAVTAPE------ 513
Query: 106 ENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFE 165
N E ++S QKA++L+F
Sbjct: 514 ------------------------------------------NPECQSSPAQKAIMLLFS 531
Query: 166 RMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKL---------- 215
R+ E+ + + +N + RL+V ++Q+GC+LGKGG ++ ++ K
Sbjct: 532 RLFELSTKKIL---DNGPRTSITARLVVPTSQIGCVLGKGGVIVSEMRKTTGATIQILKV 588
Query: 216 ---PTCALASDEVVQITGEVDTVRKALKLISHQLLDN 249
P C +D+V+QITGE VR+A+ I+ +L D+
Sbjct: 589 EQNPKCVSENDQVIQITGEFPNVREAIFHITSRLRDS 625
>gi|22328051|ref|NP_201244.2| HEN4 isoform 2 [Arabidopsis thaliana]
gi|332010501|gb|AED97884.1| HEN4 isoform 2 [Arabidopsis thaliana]
Length = 857
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 154/483 (31%), Positives = 233/483 (48%), Gaps = 74/483 (15%)
Query: 244 HQLLDNSPRD-----HESIPGNPTG-PSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPS 297
H+ + PRD ES P + G P + ++ Q A Y D H +
Sbjct: 369 HRPFEMVPRDAMGMPFESFPRDAYGRPIETMTQETLRGQSADYLAHRYSTLDTHPHSFTT 428
Query: 298 IPKFHESGVLDRPKPSPEI----LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVM 353
+ + P E+ + F++LC E GGVIG GG ++R L ETG I V
Sbjct: 429 SASMANTATMKPPPSEVEVGNQDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVG 488
Query: 354 EAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRI----ARAIPDNREQTVMT-RLLV 408
+ E+RLI ++ +P+ + S Q A++ + +R+ I DN ++ +T RL+V
Sbjct: 489 NTLDDCEERLIAVTASENPECQSSPAQKAIMLIFSRLFELATNKILDNGPRSSITARLVV 548
Query: 409 ASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALF 468
++QIGC+LGKGG I++EMRK +GA I+IL +Q PKC SEN++VV I GEF V+EA+F
Sbjct: 549 PTSQIGCVLGKGGVIVSEMRKTTGAAIQILKVEQNPKCISENDQVVQITGEFPNVREAIF 608
Query: 469 QITTRLRHHFFRDAF-----PSINRPLNPTFLDQVSPFPSFIGRRE-LSPPG-------- 514
IT+RLR F ++ S + F D+ S P IG + +S P
Sbjct: 609 HITSRLRDSVFSNSMKNSLAKSSSALTTERFYDRQSDNPLSIGSHQSVSNPATNSSSLHR 668
Query: 515 -----MYSNFGPSFHKFDAVGGPPP-------PGSFHP-----HD-------DHSAFMHH 550
S S + +VG P P F+P H+ DHS HH
Sbjct: 669 RSEDSFLSGSHSSVNYSRSVGTDPYIRPEDPFPDRFNPSAGYSHNFGRRFTMDHSDNSHH 728
Query: 551 IHRP-----GMPPHMPDMKPWGPQGLMEVGGPMGFP---DFVGPPHRR-------VPVVV 595
+ PP P P+GL + G + +G H+ V + V
Sbjct: 729 LTEAPSRLWASPP------PAAPRGLSDASGGLSSARAGHVLGSGHKSAIVTNTTVEIRV 782
Query: 596 PRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAF 655
P + + + GE G L+Q+RQIS A++ I +P G ++ +I+ISGTP+QT AAQ+L+ AF
Sbjct: 783 PANAMSFVYGEQGYNLEQLRQISGARVIIHEPPLGTSDRIIVISGTPDQTQAAQNLLHAF 842
Query: 656 VMS 658
+++
Sbjct: 843 ILT 845
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 99/198 (50%), Gaps = 26/198 (13%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI-- 376
FRLLC VG VIGK G +I+ L+Q TG I+V E SG+ DR+I I A R+
Sbjct: 49 FRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVKL 108
Query: 377 -------------------SAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLL 417
S Q A+++V +A + TV+ RLL S+ G ++
Sbjct: 109 GANNNGNAEGEKKEEEVEVSKAQGALIKVFELLA---AEADSDTVVCRLLTESSHAGAVI 165
Query: 418 GKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHH 477
GKGG ++ +RK +G I I + +P CA ++E+V + G AV++AL I+ L++
Sbjct: 166 GKGGQMVGSIRKETGCKISIR-IENLPICADTDDEMVEVEGNAIAVKKALVSISRCLQNC 224
Query: 478 FFRDAFPSI-NRPLNPTF 494
D + NRPL F
Sbjct: 225 QSIDKVRMVGNRPLEKEF 242
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 103/229 (44%), Gaps = 50/229 (21%)
Query: 44 GGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKE 103
G FR+LCP+S + VIGK G ++ Q+ Q TG IRVEE SGS +R++ I A
Sbjct: 45 GHAAFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQ----- 99
Query: 104 TSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLV 163
AD K + N G+ + E E SK Q AL+ V
Sbjct: 100 ----------------------ADSKSRVKLGANNNGNAEGEKKEEEVEVSKAQGALIKV 137
Query: 164 FERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKG-----------GCVIK-Q 211
FE ++ E +++ V RLL S+ G ++GKG GC I +
Sbjct: 138 FE-LLAAEADSDTV----------VCRLLTESSHAGAVIGKGGQMVGSIRKETGCKISIR 186
Query: 212 IDKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGN 260
I+ LP CA DE+V++ G V+KAL IS L + D + GN
Sbjct: 187 IENLPICADTDDEMVEVEGNAIAVKKALVSISRCLQNCQSIDKVRMVGN 235
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 64/217 (29%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
++F++LC GVIG G+++ + +TG I V T+ +ERL+ + AS+N
Sbjct: 452 VVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAVTASENP---- 507
Query: 106 ENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFE 165
E ++S QKA++L+F
Sbjct: 508 --------------------------------------------ECQSSPAQKAIMLIFS 523
Query: 166 RMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKL---------- 215
R+ E+ + +N S RL+V ++Q+GC+LGKGG ++ ++ K
Sbjct: 524 RLFELATNKIL---DNGPRSSITARLVVPTSQIGCVLGKGGVIVSEMRKTTGAAIQILKV 580
Query: 216 ---PTCALASDEVVQITGEVDTVRKALKLISHQLLDN 249
P C +D+VVQITGE VR+A+ I+ +L D+
Sbjct: 581 EQNPKCISENDQVVQITGEFPNVREAIFHITSRLRDS 617
>gi|357485457|ref|XP_003613016.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355514351|gb|AES95974.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 596
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 186/656 (28%), Positives = 295/656 (44%), Gaps = 133/656 (20%)
Query: 40 KSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASD 99
K PG I FR++C S + G+IG G ++SQ+ ++TG I E+ V G+D+R++++
Sbjct: 33 KLLPGQIAFRLVCHSSTVGGLIGSSGSIVSQLRRETGCKIHCEDAVVGTDDRVILV---- 88
Query: 100 NKKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKA 159
+ SD K G VL D E E S Q+
Sbjct: 89 -------------------------IGSMSDRK-------GIVLGD---REMEVSNAQEG 113
Query: 160 LLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDK----- 214
++ VF+R+ +E E + + +LL S+QVG ++GKGG I I
Sbjct: 114 VVRVFDRVWGLE-------SEKGGNGEVYGKLLAHSSQVGAIVGKGGKNISNIRNNSGSN 166
Query: 215 -----LPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLP 269
P CA +E++ ITGE V+KAL +S+ L D P S+ PT
Sbjct: 167 IRVCPAPHCAAKDEELILITGESLAVKKALIYVSYCLQDCPPMGKVSLNTPPT------- 219
Query: 270 DHSVSSQGAPYATGHRDVADIHLPMPPSIPKF------------HESGVLDRPKPSPEIL 317
++S + H D+ PS+ + + LD K S +
Sbjct: 220 ---INSSDRSTSYTHEDLFPHLNSWLPSMEGLSINDASKQTTNANGNSSLD-SKGSGHAV 275
Query: 318 TFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRIS 377
FRLLC + G VIGK G+I+R+ + TG I + E+R++ IS + + S
Sbjct: 276 VFRLLCSNNVAGSVIGKKGSIVRTFEIRTGASIVFAPPLGQYEERIVTISAFENLESSNS 335
Query: 378 APQDAVLRVQTRIARAIPDNR-------EQTVMTRLLVASNQIGCLLGKGGSIIAEMRKL 430
QDAV+ V TRIA N E V RLL+ ++ + L G G +I+E+R++
Sbjct: 336 PAQDAVILVFTRIAEDHIRNGFQPATAVESPVTARLLITTSTLHLLTGNEGQVISELRQV 395
Query: 431 SGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPL 490
SGA I++L + IP AS+N+ VV I G + V+ AL +IT+ +R + + + +
Sbjct: 396 SGADIQLLHGEPIPN-ASDNDVVVQITGGYRCVENALRKITSIIRDNPLTNELLA-EAKI 453
Query: 491 NPTF-LDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPH------DD 543
P+F L++ + FI R++ S P F + P G + +
Sbjct: 454 KPSFPLNKDTVRSKFITRKKSSFP---------FARVP----PQNAGVYQAKKVTENGES 500
Query: 544 HSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPII 603
H+ + ++ PG + + + V ++V + +
Sbjct: 501 HTNLIENVE-PGRGNIVATVT-----------------------NTTVEIIVSEHVFGSV 536
Query: 604 QGEDGACLKQIRQISDAKITITDPKP-GATETVIIISGTPEQTHAAQSLIQAFVMS 658
GEDG L +IRQIS A +T+ DP G + ++ISGTP+QT AAQSL+QAF+ +
Sbjct: 537 YGEDGGNLDRIRQISGADVTVFDPSSTGTSGGKVVISGTPDQTFAAQSLLQAFIQT 592
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/209 (35%), Positives = 114/209 (54%), Gaps = 20/209 (9%)
Query: 279 PYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAI 338
P + + D H P PP + V K P + FRL+CH VGG+IG G+I
Sbjct: 4 PTFSAAVETTDHHHPQPPLKRNNRKRPVF---KLLPGQIAFRLVCHSSTVGGLIGSSGSI 60
Query: 339 IRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHP------DDR---ISAPQDAVLRVQTR 389
+ L++ETGC I +AV GT+DR+I++ G DR +S Q+ V+RV R
Sbjct: 61 VSQLRRETGCKIHCEDAVVGTDDRVILVIGSMSDRKGIVLGDREMEVSNAQEGVVRVFDR 120
Query: 390 IARAIPD---NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKC 446
+ + N E V +LL S+Q+G ++GKGG I+ +R SG+ IR+ P C
Sbjct: 121 VWGLESEKGGNGE--VYGKLLAHSSQVGAIVGKGGKNISNIRNNSGSNIRVC---PAPHC 175
Query: 447 ASENEEVVLINGEFEAVQEALFQITTRLR 475
A+++EE++LI GE AV++AL ++ L+
Sbjct: 176 AAKDEELILITGESLAVKKALIYVSYCLQ 204
>gi|28261403|gb|AAO37828.1| HEN4 [Arabidopsis thaliana]
Length = 869
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 155/486 (31%), Positives = 235/486 (48%), Gaps = 80/486 (16%)
Query: 244 HQLLDNSPRD-----HESIPGNPTG-PSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPS 297
H+ + PRD ES P + G P + ++ Q A Y D H +
Sbjct: 381 HRPFEMVPRDAMGMPFESFPRDAYGRPIETMTQETLRGQSADYLAHRYSTLDTHPHSFTT 440
Query: 298 IPKFHESGVLDRPKPSPEI----LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVM 353
+ + P E+ + F++LC E GGVIG GG ++R L ETG I V
Sbjct: 441 SASMANTATMKPPPSEVEVGNQDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVG 500
Query: 354 EAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRI----ARAIPDNREQTVMT-RLLV 408
A+ E+RLI ++ +P+ + S Q A++ + +R+ I DN ++ +T RL+V
Sbjct: 501 NALDDCEERLIAVTASENPECQSSPAQKAIMLIFSRLFELATNKILDNGPRSSITARLVV 560
Query: 409 ASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALF 468
++QIGC+LGKGG I++EMRK +GA I+IL +Q PKC SEN++VV I EF V+EA+F
Sbjct: 561 PTSQIGCVLGKGGVIVSEMRKTTGAAIQILKVEQNPKCISENDQVVQITEEFPNVREAIF 620
Query: 469 QITTRLRHHFFRDAF-----PSINRPLNPTFLDQVSPFPSFIGRRE-LSPPGMYSNFGPS 522
IT+RLR F ++ S + F D+ S P IG + +S P S+ S
Sbjct: 621 HITSRLRDSVFSNSMKNSLAKSSSALTTERFYDRQSDNPLSIGSHQSVSNPATNSS---S 677
Query: 523 FHKFD----------------AVGGPPP-------PGSFHP-----HD-------DHSAF 547
H+ +VG P P F+P H+ DHS
Sbjct: 678 LHRRSEDSFLSGSHSSVNYSRSVGTDPYIRPEDPFPDRFNPSAGYSHNFGRRFTMDHSDN 737
Query: 548 MHHIHRP-----GMPPHMPDMKPWGPQGLMEVGGPMGFP---DFVGPPHRR-------VP 592
HH+ PP P P+GL + G + +G H+ V
Sbjct: 738 SHHLTEAPSRLWASPP------PAAPRGLSDASGGLSSARAGHVLGSGHKSAIVTNTTVE 791
Query: 593 VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLI 652
+ VP + + + GE G L+Q+RQIS A++ I +P G ++ +I+ISGTP+QT AAQ+L+
Sbjct: 792 IRVPANAMSFVYGEQGYNLEQLRQISGARVIIHEPPLGTSDRIIVISGTPDQTQAAQNLL 851
Query: 653 QAFVMS 658
AF+++
Sbjct: 852 HAFILT 857
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 99/198 (50%), Gaps = 26/198 (13%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI-- 376
FRLLC VG VIGK G +I+ L+Q TG I+V E SG+ DR+I I A R+
Sbjct: 49 FRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVKL 108
Query: 377 -------------------SAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLL 417
S Q A+++V +A + TV+ RLL S+ G ++
Sbjct: 109 GANNNGNAEGEKKEEEVEVSKAQGALIKVFELLA---AEADSDTVVCRLLTESSHAGAVI 165
Query: 418 GKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHH 477
GKGG ++ +RK +G I I + +P CA ++E+V + G AV++AL I+ L++
Sbjct: 166 GKGGQMVGSIRKETGCKISIR-IENLPICADTDDEMVEVEGNAIAVKKALVSISRCLQNC 224
Query: 478 FFRDAFPSI-NRPLNPTF 494
D + NRPL F
Sbjct: 225 QSIDKVRMVGNRPLEKEF 242
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 103/229 (44%), Gaps = 50/229 (21%)
Query: 44 GGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKE 103
G FR+LCP+S + VIGK G ++ Q+ Q TG IRVEE SGS +R++ I A
Sbjct: 45 GHAAFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQ----- 99
Query: 104 TSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLV 163
AD K + N G+ + E E SK Q AL+ V
Sbjct: 100 ----------------------ADSKSRVKLGANNNGNAEGEKKEEEVEVSKAQGALIKV 137
Query: 164 FERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKG-----------GCVIK-Q 211
FE ++ E +++ V RLL S+ G ++GKG GC I +
Sbjct: 138 FE-LLAAEADSDTV----------VCRLLTESSHAGAVIGKGGQMVGSIRKETGCKISIR 186
Query: 212 IDKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGN 260
I+ LP CA DE+V++ G V+KAL IS L + D + GN
Sbjct: 187 IENLPICADTDDEMVEVEGNAIAVKKALVSISRCLQNCQSIDKVRMVGN 235
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 95/217 (43%), Gaps = 64/217 (29%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
++F++LC GVIG G+++ + +TG I V + +ERL+ + AS+N
Sbjct: 464 VVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNALDDCEERLIAVTASENP---- 519
Query: 106 ENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFE 165
E ++S QKA++L+F
Sbjct: 520 --------------------------------------------ECQSSPAQKAIMLIFS 535
Query: 166 RMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKL---------- 215
R+ E+ + +N S RL+V ++Q+GC+LGKGG ++ ++ K
Sbjct: 536 RLFELATNKIL---DNGPRSSITARLVVPTSQIGCVLGKGGVIVSEMRKTTGAAIQILKV 592
Query: 216 ---PTCALASDEVVQITGEVDTVRKALKLISHQLLDN 249
P C +D+VVQIT E VR+A+ I+ +L D+
Sbjct: 593 EQNPKCISENDQVVQITEEFPNVREAIFHITSRLRDS 629
>gi|413933963|gb|AFW68514.1| hypothetical protein ZEAMMB73_983755 [Zea mays]
Length = 464
Score = 200 bits (508), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 160/496 (32%), Positives = 244/496 (49%), Gaps = 67/496 (13%)
Query: 9 KRPHDDDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIMFRVLCPVSKIDGVIGKDGEMM 68
KR H + + +GK K +L+ + + S S P ++R+LCP KI V+G+ G+++
Sbjct: 13 KRRHSNSD----DGKRK--RLSSRHDDTSMS-SEPIETIYRILCPAKKIGSVLGRGGDIV 65
Query: 69 SQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASVADE 128
+ ++T IRV +++ G+DER+++I N+ E + DE
Sbjct: 66 KALREETKAKIRVADSIPGADERVIIIFNYQNQPE---------------------LTDE 104
Query: 129 SDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSKFV 188
+ K+ + DGL + K Q ALL + +++V E EVA E+ S
Sbjct: 105 AAEKQ---------ISDGLGNMKPHCFAQDALLKIHDKIVADEIYDEVAHDES--SDDVT 153
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQI-------------DKLPTCALASDEVVQITGEVDTV 235
R+LV QVGCLLGKGG +I+Q+ + LP CAL SDE+VQI+G V
Sbjct: 154 ARILVQGNQVGCLLGKGGSIIQQLRSDTGAGIRVLSSENLPQCALQSDELVQISGAPSLV 213
Query: 236 RKALKLIS---HQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIHL 292
RKAL IS HQ R E I T H P + P+ H L
Sbjct: 214 RKALYEISTRLHQHPRKENRPLEQIIDASTQRKHESPTLQHENPMLPHLHSHHPPPIPLL 273
Query: 293 PMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV 352
S P++ P E + R+LC E +G VIGK GA +R ++Q+TG IKV
Sbjct: 274 DPYRSGPQY--------PVSETEEFSIRILCASELIGSVIGKSGANVRRVEQQTGARIKV 325
Query: 353 MEA-VSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASN 411
E + +RLI++S P + IS +A++ + +++ + + + TRL+V SN
Sbjct: 326 QEIDKDASGERLIIVSSNEIPTEPISPTIEALILLHDKVSAS---SEKHHSSTRLVVPSN 382
Query: 412 QIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQIT 471
++GC+LG+GG +I EMR+ +GA IR+ K PK S +E+V + G + AL +I
Sbjct: 383 KVGCILGEGGQVITEMRRRTGAEIRVYSKADKPKYLSFGDELVQVAGPPAIARGALTEIA 442
Query: 472 TRLRHHFFRDAFPSIN 487
+RLR RD N
Sbjct: 443 SRLRTRTLRDTSCWTN 458
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 118/196 (60%), Gaps = 29/196 (14%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVI----SGPAHPDD 374
+R+LC +++G V+G+GG I+++L++ET I+V +++ G ++R+I+I + P D+
Sbjct: 45 YRILCPAKKIGSVLGRGGDIVKALREETKAKIRVADSIPGADERVIIIFNYQNQPELTDE 104
Query: 375 ----RISA----------PQDAVLRVQTRIA------RAIPDNREQTVMTRLLVASNQIG 414
+IS QDA+L++ +I D V R+LV NQ+G
Sbjct: 105 AAEKQISDGLGNMKPHCFAQDALLKIHDKIVADEIYDEVAHDESSDDVTARILVQGNQVG 164
Query: 415 CLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRL 474
CLLGKGGSII ++R +GA IR+L + +P+CA +++E+V I+G V++AL++I+TRL
Sbjct: 165 CLLGKGGSIIQQLRSDTGAGIRVLSSENLPQCALQSDELVQISGAPSLVRKALYEISTRL 224
Query: 475 RHHFFRDAFPSINRPL 490
H ++ NRPL
Sbjct: 225 HQHPRKE-----NRPL 235
>gi|357124311|ref|XP_003563844.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 666
Score = 200 bits (508), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 156/544 (28%), Positives = 260/544 (47%), Gaps = 79/544 (14%)
Query: 154 SKVQKALLLVFERMVEVEPETEVADQEN-------TKSSKFVLRLLVLSTQVGCLLGKGG 206
S Q+AL++V R++E EP+ D E K RL+V VGCLLGKGG
Sbjct: 155 SPAQEALIMVHRRILETEPDDGDEDGEYGPRGKDARDRGKVTTRLVVPRLHVGCLLGKGG 214
Query: 207 CVIKQI--------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPR 252
+I+Q+ P C S+EVVQI GE + V+KA+ +IS +L ++ R
Sbjct: 215 KIIEQMRSETKTHIRILPRDQNTPRCVSLSEEVVQIVGEGNCVKKAVAIISDRLKESLHR 274
Query: 253 DHESIPGNPTGPSHPLPDHSVSSQGAPYAT--GHRDVADIHLPMPPSIPKFHESG--VLD 308
D G P H + Q Y D + M P +F +G +
Sbjct: 275 DRGPFRGR-NSPEHRISQADEYQQMPAYEEPFARFDQIRNNGSMEPPGYEFDSNGSKFNE 333
Query: 309 RPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
P+ + + FR+LC +++ ++G I+ L+ E G D+++ + V G+++R ++I+
Sbjct: 334 HPEFPYDEIIFRILCPNDKANNLVGSRDGILEMLQVEVGVDVRLTDLVVGSDERTVIITS 393
Query: 369 PAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMR 428
PD + Q+A+L +QT I PDN + + TRLLV S+++ C G+ GS +++++
Sbjct: 394 REGPDHELFPAQEALLHIQTHIVDLGPDN-DNIITTRLLVPSSEVACFEGRDGS-LSDIQ 451
Query: 429 KLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINR 488
+ + A ++IL ++++P CA E++E++ I G A + AL Q+TT++R + +R+ ++
Sbjct: 452 RQTSANVQILPREELPSCALESDELIQIVGGIRAARSALMQVTTKIRSYIYRE----MSV 507
Query: 489 PLNPTFLDQVSPFPSFIGRRELSPPGMY-------------SNFGPSFHKFDAVGGPPPP 535
P ++ P G SP G+Y S+H D+ G
Sbjct: 508 PNQIASINVHGSIPPANG----SPRGIYPGNDLPMAIYQQSQQMTTSWHSKDSGGS--AS 561
Query: 536 GSFHPHDD-HSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVV 594
GSF + + I R + P + +EV V
Sbjct: 562 GSFEQGSNINDDIRSTIKRFAV--------PLVTRSTLEV-------------------V 594
Query: 595 VPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQA 654
+P+S V + G+ L QI ++S A +T+ + +PG E V+ ISGTPEQ AQSL+Q
Sbjct: 595 IPKSAVASLSMRAGSKLAQISEMSGASVTLGEDRPGVMEKVVRISGTPEQADKAQSLLQG 654
Query: 655 FVMS 658
F++S
Sbjct: 655 FILS 658
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 95/188 (50%), Gaps = 24/188 (12%)
Query: 318 TFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG--PAHPDDR 375
+FR+LC + + G + I + ++G I + +G R+I ++ P D R
Sbjct: 94 SFRILCPESKTYGF---PASFIIKAQDDSGAIITIHAPFAGDPVRVIEMADGVPRDVDGR 150
Query: 376 ---ISAPQDAVLRVQTRIARAIPDNREQ---------------TVMTRLLVASNQIGCLL 417
S Q+A++ V RI PD+ ++ V TRL+V +GCLL
Sbjct: 151 PPMFSPAQEALIMVHRRILETEPDDGDEDGEYGPRGKDARDRGKVTTRLVVPRLHVGCLL 210
Query: 418 GKGGSIIAEMRKLSGAYIRILGKDQ-IPKCASENEEVVLINGEFEAVQEALFQITTRLRH 476
GKGG II +MR + +IRIL +DQ P+C S +EEVV I GE V++A+ I+ RL+
Sbjct: 211 GKGGKIIEQMRSETKTHIRILPRDQNTPRCVSLSEEVVQIVGEGNCVKKAVAIISDRLKE 270
Query: 477 HFFRDAFP 484
RD P
Sbjct: 271 SLHRDRGP 278
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 87/388 (22%), Positives = 154/388 (39%), Gaps = 109/388 (28%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
I+FR+LCP K + ++G ++ + + GV +R+ + V GSDER V+I + +
Sbjct: 342 IIFRILCPNDKANNLVGSRDGILEMLQVEVGVDVRLTDLVVGSDERTVIITSREGP---- 397
Query: 106 ENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFE 165
+ E Q+ALL +
Sbjct: 398 --------------------------------------------DHELFPAQEALLHIQT 413
Query: 166 RMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCV------------IKQID 213
+V++ P D +N ++ RLLV S++V C G+ G + I +
Sbjct: 414 HIVDLGP-----DNDNIITT----RLLVPSSEVACFEGRDGSLSDIQRQTSANVQILPRE 464
Query: 214 KLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRD------------HESIP--- 258
+LP+CAL SDE++QI G + R AL ++ ++ R+ H SIP
Sbjct: 465 ELPSCALESDELIQIVGGIRAARSALMQVTTKIRSYIYREMSVPNQIASINVHGSIPPAN 524
Query: 259 GNPTG--PSHPLP-------------DHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHE 303
G+P G P + LP HS S G+ + + ++I+ + +I +F
Sbjct: 525 GSPRGIYPGNDLPMAIYQQSQQMTTSWHSKDSGGSASGSFEQG-SNINDDIRSTIKRF-- 581
Query: 304 SGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRL 363
P T ++ V + + G+ + + + +G + + E G +++
Sbjct: 582 ------AVPLVTRSTLEVVIPKSAVASLSMRAGSKLAQISEMSGASVTLGEDRPGVMEKV 635
Query: 364 IVISG-PAHPDDRISAPQDAVLRVQTRI 390
+ ISG P D S Q +L +Q I
Sbjct: 636 VRISGTPEQADKAQSLLQGFILSIQDDI 663
>gi|334188619|ref|NP_001190612.1| HEN4 isoform 2 [Arabidopsis thaliana]
gi|332010502|gb|AED97885.1| HEN4 isoform 2 [Arabidopsis thaliana]
Length = 866
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 156/495 (31%), Positives = 235/495 (47%), Gaps = 89/495 (17%)
Query: 244 HQLLDNSPRD-----HESIPGNPTG-PSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPS 297
H+ + PRD ES P + G P + ++ Q A Y D H +
Sbjct: 369 HRPFEMVPRDAMGMPFESFPRDAYGRPIETMTQETLRGQSADYLAHRYSTLDTHPHSFTT 428
Query: 298 IPKFHESGVLDRPKPSPEI----LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVM 353
+ + P E+ + F++LC E GGVIG GG ++R L ETG I V
Sbjct: 429 SASMANTATMKPPPSEVEVGNQDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVG 488
Query: 354 EAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRI----ARAIPDNREQTVMT-RLLV 408
+ E+RLI ++ +P+ + S Q A++ + +R+ I DN ++ +T RL+V
Sbjct: 489 NTLDDCEERLIAVTASENPECQSSPAQKAIMLIFSRLFELATNKILDNGPRSSITARLVV 548
Query: 409 ASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALF 468
++QIGC+LGKGG I++EMRK +GA I+IL +Q PKC SEN++VV I GEF V+EA+F
Sbjct: 549 PTSQIGCVLGKGGVIVSEMRKTTGAAIQILKVEQNPKCISENDQVVQITGEFPNVREAIF 608
Query: 469 QITTRLRHHFFRDAF-----PSINRPLNPTFLDQVSPFPSFIGRRE-LSPPGMYSNFGPS 522
IT+RLR F ++ S + F D+ S P IG + +S P S+ S
Sbjct: 609 HITSRLRDSVFSNSMKNSLAKSSSALTTERFYDRQSDNPLSIGSHQSVSNPATNSS---S 665
Query: 523 FHKFD----------------AVGGPPP-------PGSFHP-----HD-------DHSAF 547
H+ +VG P P F+P H+ DHS
Sbjct: 666 LHRRSEDSFLSGSHSSVNYSRSVGTDPYIRPEDPFPDRFNPSAGYSHNFGRRFTMDHSDN 725
Query: 548 MHHIHRP-----GMPPHMPDMKPWGPQGLMEVGGPMGFP---DFVGPPHRR--------- 590
HH+ PP P P+GL + G + +G H R
Sbjct: 726 SHHLTEAPSRLWASPP------PAAPRGLSDASGGLSSARAGHVLGSLHARLVFSSGHKS 779
Query: 591 -------VPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPE 643
V + VP + + + GE G L+Q+RQIS A++ I +P G ++ +I+ISGTP+
Sbjct: 780 AIVTNTTVEIRVPANAMSFVYGEQGYNLEQLRQISGARVIIHEPPLGTSDRIIVISGTPD 839
Query: 644 QTHAAQSLIQAFVMS 658
QT AAQ+L+ AF+++
Sbjct: 840 QTQAAQNLLHAFILT 854
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 99/198 (50%), Gaps = 26/198 (13%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI-- 376
FRLLC VG VIGK G +I+ L+Q TG I+V E SG+ DR+I I A R+
Sbjct: 49 FRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVKL 108
Query: 377 -------------------SAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLL 417
S Q A+++V +A + TV+ RLL S+ G ++
Sbjct: 109 GANNNGNAEGEKKEEEVEVSKAQGALIKVFELLA---AEADSDTVVCRLLTESSHAGAVI 165
Query: 418 GKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHH 477
GKGG ++ +RK +G I I + +P CA ++E+V + G AV++AL I+ L++
Sbjct: 166 GKGGQMVGSIRKETGCKISIR-IENLPICADTDDEMVEVEGNAIAVKKALVSISRCLQNC 224
Query: 478 FFRDAFPSI-NRPLNPTF 494
D + NRPL F
Sbjct: 225 QSIDKVRMVGNRPLEKEF 242
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 103/229 (44%), Gaps = 50/229 (21%)
Query: 44 GGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKE 103
G FR+LCP+S + VIGK G ++ Q+ Q TG IRVEE SGS +R++ I A
Sbjct: 45 GHAAFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQ----- 99
Query: 104 TSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLV 163
AD K + N G+ + E E SK Q AL+ V
Sbjct: 100 ----------------------ADSKSRVKLGANNNGNAEGEKKEEEVEVSKAQGALIKV 137
Query: 164 FERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKG-----------GCVIK-Q 211
FE ++ E +++ V RLL S+ G ++GKG GC I +
Sbjct: 138 FE-LLAAEADSDTV----------VCRLLTESSHAGAVIGKGGQMVGSIRKETGCKISIR 186
Query: 212 IDKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGN 260
I+ LP CA DE+V++ G V+KAL IS L + D + GN
Sbjct: 187 IENLPICADTDDEMVEVEGNAIAVKKALVSISRCLQNCQSIDKVRMVGN 235
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 64/217 (29%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
++F++LC GVIG G+++ + +TG I V T+ +ERL+ + AS+N
Sbjct: 452 VVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAVTASENP---- 507
Query: 106 ENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFE 165
E ++S QKA++L+F
Sbjct: 508 --------------------------------------------ECQSSPAQKAIMLIFS 523
Query: 166 RMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKL---------- 215
R+ E+ + +N S RL+V ++Q+GC+LGKGG ++ ++ K
Sbjct: 524 RLFELATNKIL---DNGPRSSITARLVVPTSQIGCVLGKGGVIVSEMRKTTGAAIQILKV 580
Query: 216 ---PTCALASDEVVQITGEVDTVRKALKLISHQLLDN 249
P C +D+VVQITGE VR+A+ I+ +L D+
Sbjct: 581 EQNPKCISENDQVVQITGEFPNVREAIFHITSRLRDS 617
>gi|413955311|gb|AFW87960.1| hypothetical protein ZEAMMB73_110576 [Zea mays]
gi|413955312|gb|AFW87961.1| hypothetical protein ZEAMMB73_110576 [Zea mays]
Length = 543
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 173/534 (32%), Positives = 263/534 (49%), Gaps = 97/534 (18%)
Query: 43 PGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKK 102
P ++R LC KI +IG+ GE+ Q+ +T IR+ E+V G +ER++ I +S +
Sbjct: 35 PDDTVYRYLCASRKIGSIIGRGGEIAKQLRTETQAKIRIGESVPGCEERVITIFSSSRRT 94
Query: 103 ETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLL 162
T ++ +E + Q AL
Sbjct: 95 NTIDD-----------------------------------------AEDKVCPAQDALFR 113
Query: 163 VFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI---------- 212
V ER+ E +E S + +RLLV S Q+GC+LGKGG +I+ I
Sbjct: 114 VHERLATDESFGNEDSEE--ISPQVTVRLLVPSDQIGCILGKGGHIIQGIRSETGAQIRV 171
Query: 213 ---DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLP 269
D +P CA++ DE++QI+G++ V+KAL +S +L +N + + + T P +P
Sbjct: 172 LSKDHIPACAISGDELLQISGDMVVVKKALCQVSSRLHNNPSKSQHLLASSLTQP-YPGG 230
Query: 270 DHSVSSQGAPYATGHRDVADIHLPMPP----------SIPKFHESGVLDRPKPSPEILTF 319
H S AP V I +PP P ++ R + S + +
Sbjct: 231 THLGGSSAAP-------VVGITPVIPPYGGYKGDVAGDWPSLYQP---RRDESSAKEFSL 280
Query: 320 RLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIV-ISGPAHPDDRISA 378
RLLC VGGVIGKGG II+ ++QE+G IKV + S +D I+ +S +D +S
Sbjct: 281 RLLCAAANVGGVIGKGGGIIKQIRQESGALIKVASSNSDPDDDCIITVSAKEFFEDPVSP 340
Query: 379 PQDAVLRVQTRIA-RAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRI 437
DA +R+Q R + ++ + EQ+ TRLLV++++IGCL+GKGGSII E+R+ S A IRI
Sbjct: 341 TIDAAVRLQLRCSEKSDSELAEQSYTTRLLVSTSRIGCLIGKGGSIITEIRRTSRANIRI 400
Query: 438 LGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFR-----DAFPSINRPLNP 492
L K+ +PK A+E+EE+V I+G + + AL QI TRL+ +FF AFPS+ P +P
Sbjct: 401 LSKENVPKVAAEDEEMVQISGGLDVARHALVQIATRLKANFFEREGSLSAFPSVI-PYHP 459
Query: 493 TFLD-QVSPFPSFIGRRELSPPGMYSNFGPSFHKFD---------AVGGPPPPG 536
VS P ++ R+ P G Y + +F D + GG PG
Sbjct: 460 LPAGVSVSDEPKYLS-RDTKPVGHYL-YSSAFRTSDDMIPSDSYASYGGSQAPG 511
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/252 (32%), Positives = 131/252 (51%), Gaps = 19/252 (7%)
Query: 308 DRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVIS 367
D P P+ +R LC ++G +IG+GG I + L+ ET I++ E+V G E+R+I I
Sbjct: 29 DTYAPGPDDTVYRYLCASRKIGSIIGRGGEIAKQLRTETQAKIRIGESVPGCEERVITIF 88
Query: 368 GPAH-------PDDRISAPQDAVLRVQTRIARAIPDNREQT------VMTRLLVASNQIG 414
+ +D++ QDA+ RV R+A E + V RLLV S+QIG
Sbjct: 89 SSSRRTNTIDDAEDKVCPAQDALFRVHERLATDESFGNEDSEEISPQVTVRLLVPSDQIG 148
Query: 415 CLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRL 474
C+LGKGG II +R +GA IR+L KD IP CA +E++ I+G+ V++AL Q+++RL
Sbjct: 149 CILGKGGHIIQGIRSETGAQIRVLSKDHIPACAISGDELLQISGDMVVVKKALCQVSSRL 208
Query: 475 RHHFFRDAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPP 534
++ PS ++ L + L Q P + +G +P + P + +
Sbjct: 209 HNN------PSKSQHLLASSLTQPYPGGTHLGGSSAAPVVGITPVIPPYGGYKGDVAGDW 262
Query: 535 PGSFHPHDDHSA 546
P + P D S+
Sbjct: 263 PSLYQPRRDESS 274
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 115/269 (42%), Gaps = 76/269 (28%)
Query: 20 PNGKEKSQKLAGDYSE-NQPSKSFPGGIMF--RVLCPVSKIDGVIGKDGEMMSQISQDTG 76
P G K +AGD+ QP + F R+LC + + GVIGK G ++ QI Q++G
Sbjct: 250 PYGGYKGD-VAGDWPSLYQPRRDESSAKEFSLRLLCAAANVGGVIGKGGGIIKQIRQESG 308
Query: 77 VTIRVEETVSGSDERLVVIEASDNKKE--TSENLEASIERSENNGREEASVADESDNKKE 134
I+V + S D+ ++ ++ E S ++A++ R + +++SD
Sbjct: 309 ALIKVASSNSDPDDDCIITVSAKEFFEDPVSPTIDAAV-------RLQLRCSEKSD---- 357
Query: 135 DSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVL 194
+E+A+Q + RLLV
Sbjct: 358 ---------------------------------------SELAEQ------SYTTRLLVS 372
Query: 195 STQVGCLLGKGGCVIKQI-------------DKLPTCALASDEVVQITGEVDTVRKALKL 241
++++GCL+GKGG +I +I + +P A +E+VQI+G +D R AL
Sbjct: 373 TSRIGCLIGKGGSIITEIRRTSRANIRILSKENVPKVAAEDEEMVQISGGLDVARHALVQ 432
Query: 242 ISHQLLDNSPRDHESIPGNPTG-PSHPLP 269
I+ +L N S+ P+ P HPLP
Sbjct: 433 IATRLKANFFEREGSLSAFPSVIPYHPLP 461
>gi|326512112|dbj|BAJ96037.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 541
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 168/496 (33%), Positives = 247/496 (49%), Gaps = 92/496 (18%)
Query: 17 HTEPNGKEKSQKLAGDYSENQPSKSF----------PGGIMFRVLCPVSKIDGVIGKDGE 66
H +GK +S DYSEN K P ++R LC KI +IG+ GE
Sbjct: 6 HRNSHGKRQS-----DYSENGGGKRRNPGDDTYAPGPDDTVYRYLCTSRKIGSIIGRGGE 60
Query: 67 MMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASVA 126
+ Q+ DT IR+ E+V DER++ I +S + T E+
Sbjct: 61 IAKQLRSDTQAKIRIGESVPACDERVITIFSSSRETNTIED------------------- 101
Query: 127 DESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKS-S 185
+E + Q AL V E++ + ++EN +S
Sbjct: 102 ----------------------TEDKVCPAQDALFRVHEKLAT---DDGPVNKENEESLG 136
Query: 186 KFVLRLLVLSTQVGCLLGKGGCVIKQI-------------DKLPTCALASDEVVQITGEV 232
+ +RLLV S Q+GC++GKGG +I+ I + LP CA + DE++ ITG+
Sbjct: 137 QVTVRLLVPSDQIGCIIGKGGHIIQGIRSDTGSQIRVLSNEHLPLCATSGDELLLITGDP 196
Query: 233 DTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIHL 292
VRKAL +S +L N R + + P P+ SS AP V I
Sbjct: 197 MVVRKALLQVSSRLHGNPSRSQHLLASSLNQP-FPVGSRLGSSSTAP-------VVGI-T 247
Query: 293 PMPPSIPKFHESGVLDRPK--------PSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQ 344
PM ++ V D P SP+ + RLLC VGGVIGKGG II+ ++Q
Sbjct: 248 PMVSPYGRYKGDMVGDWPSIYQPRREVSSPKEFSLRLLCAAANVGGVIGKGGGIIKQIRQ 307
Query: 345 ETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAI-PDNREQTVM 403
E+G IKV ++ S +D +I +S +D +S DA +R+Q R + I ++ E +
Sbjct: 308 ESGAFIKV-DSSSAEDDCIITVSAKEFFEDPVSPTIDATVRLQPRCSEKIDAESGEPSYT 366
Query: 404 TRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAV 463
TRLLV++++IGCL+GKGGSII E+R+ S A IRI+ K +PK AS++EE+VLI+G+ +
Sbjct: 367 TRLLVSTSRIGCLIGKGGSIITEIRRTSRANIRIISKQDVPKVASDDEEMVLISGDLDFA 426
Query: 464 QEALFQITTRLRHHFF 479
+ AL QITTRL+ +FF
Sbjct: 427 RHALLQITTRLKANFF 442
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 81/243 (33%), Positives = 132/243 (54%), Gaps = 25/243 (10%)
Query: 308 DRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVIS 367
D P P+ +R LC ++G +IG+GG I + L+ +T I++ E+V ++R+I I
Sbjct: 31 DTYAPGPDDTVYRYLCTSRKIGSIIGRGGEIAKQLRSDTQAKIRIGESVPACDERVITIF 90
Query: 368 GPAH-------PDDRISAPQDAVLRVQTRIARAI-PDNREQ-----TVMTRLLVASNQIG 414
+ +D++ QDA+ RV ++A P N+E V RLLV S+QIG
Sbjct: 91 SSSRETNTIEDTEDKVCPAQDALFRVHEKLATDDGPVNKENEESLGQVTVRLLVPSDQIG 150
Query: 415 CLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRL 474
C++GKGG II +R +G+ IR+L + +P CA+ +E++LI G+ V++AL Q+++RL
Sbjct: 151 CIIGKGGHIIQGIRSDTGSQIRVLSNEHLPLCATSGDELLLITGDPMVVRKALLQVSSRL 210
Query: 475 RHHFFRDAFPSINRPLNPTFLDQVSPFPSFIGRRELSP----PGMYSNFGPSFHKFDAVG 530
+ PS ++ L + L+Q P S +G +P M S +G +K D VG
Sbjct: 211 HGN------PSRSQHLLASSLNQPFPVGSRLGSSSTAPVVGITPMVSPYGR--YKGDMVG 262
Query: 531 GPP 533
P
Sbjct: 263 DWP 265
>gi|413955310|gb|AFW87959.1| hypothetical protein ZEAMMB73_110576 [Zea mays]
Length = 528
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 173/534 (32%), Positives = 263/534 (49%), Gaps = 97/534 (18%)
Query: 43 PGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKK 102
P ++R LC KI +IG+ GE+ Q+ +T IR+ E+V G +ER++ I +S +
Sbjct: 35 PDDTVYRYLCASRKIGSIIGRGGEIAKQLRTETQAKIRIGESVPGCEERVITIFSSSRRT 94
Query: 103 ETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLL 162
T ++ +E + Q AL
Sbjct: 95 NTIDD-----------------------------------------AEDKVCPAQDALFR 113
Query: 163 VFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI---------- 212
V ER+ E +E S + +RLLV S Q+GC+LGKGG +I+ I
Sbjct: 114 VHERLATDESFGNEDSEE--ISPQVTVRLLVPSDQIGCILGKGGHIIQGIRSETGAQIRV 171
Query: 213 ---DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLP 269
D +P CA++ DE++QI+G++ V+KAL +S +L +N + + + T P +P
Sbjct: 172 LSKDHIPACAISGDELLQISGDMVVVKKALCQVSSRLHNNPSKSQHLLASSLTQP-YPGG 230
Query: 270 DHSVSSQGAPYATGHRDVADIHLPMPP----------SIPKFHESGVLDRPKPSPEILTF 319
H S AP V I +PP P ++ R + S + +
Sbjct: 231 THLGGSSAAP-------VVGITPVIPPYGGYKGDVAGDWPSLYQP---RRDESSAKEFSL 280
Query: 320 RLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIV-ISGPAHPDDRISA 378
RLLC VGGVIGKGG II+ ++QE+G IKV + S +D I+ +S +D +S
Sbjct: 281 RLLCAAANVGGVIGKGGGIIKQIRQESGALIKVASSNSDPDDDCIITVSAKEFFEDPVSP 340
Query: 379 PQDAVLRVQTRIA-RAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRI 437
DA +R+Q R + ++ + EQ+ TRLLV++++IGCL+GKGGSII E+R+ S A IRI
Sbjct: 341 TIDAAVRLQLRCSEKSDSELAEQSYTTRLLVSTSRIGCLIGKGGSIITEIRRTSRANIRI 400
Query: 438 LGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFR-----DAFPSINRPLNP 492
L K+ +PK A+E+EE+V I+G + + AL QI TRL+ +FF AFPS+ P +P
Sbjct: 401 LSKENVPKVAAEDEEMVQISGGLDVARHALVQIATRLKANFFEREGSLSAFPSVI-PYHP 459
Query: 493 TFLD-QVSPFPSFIGRRELSPPGMYSNFGPSFHKFD---------AVGGPPPPG 536
VS P ++ R+ P G Y + +F D + GG PG
Sbjct: 460 LPAGVSVSDEPKYLS-RDTKPVGHYL-YSSAFRTSDDMIPSDSYASYGGSQAPG 511
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/252 (32%), Positives = 131/252 (51%), Gaps = 19/252 (7%)
Query: 308 DRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVIS 367
D P P+ +R LC ++G +IG+GG I + L+ ET I++ E+V G E+R+I I
Sbjct: 29 DTYAPGPDDTVYRYLCASRKIGSIIGRGGEIAKQLRTETQAKIRIGESVPGCEERVITIF 88
Query: 368 GPAH-------PDDRISAPQDAVLRVQTRIARAIPDNREQT------VMTRLLVASNQIG 414
+ +D++ QDA+ RV R+A E + V RLLV S+QIG
Sbjct: 89 SSSRRTNTIDDAEDKVCPAQDALFRVHERLATDESFGNEDSEEISPQVTVRLLVPSDQIG 148
Query: 415 CLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRL 474
C+LGKGG II +R +GA IR+L KD IP CA +E++ I+G+ V++AL Q+++RL
Sbjct: 149 CILGKGGHIIQGIRSETGAQIRVLSKDHIPACAISGDELLQISGDMVVVKKALCQVSSRL 208
Query: 475 RHHFFRDAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPP 534
++ PS ++ L + L Q P + +G +P + P + +
Sbjct: 209 HNN------PSKSQHLLASSLTQPYPGGTHLGGSSAAPVVGITPVIPPYGGYKGDVAGDW 262
Query: 535 PGSFHPHDDHSA 546
P + P D S+
Sbjct: 263 PSLYQPRRDESS 274
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 112/260 (43%), Gaps = 75/260 (28%)
Query: 29 LAGDYSE-NQPSKSFPGGIMF--RVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETV 85
+AGD+ QP + F R+LC + + GVIGK G ++ QI Q++G I+V +
Sbjct: 258 VAGDWPSLYQPRRDESSAKEFSLRLLCAAANVGGVIGKGGGIIKQIRQESGALIKVASSN 317
Query: 86 SGSDERLVVIEASDNKKE--TSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVL 143
S D+ ++ ++ E S ++A++ R + +++SD
Sbjct: 318 SDPDDDCIITVSAKEFFEDPVSPTIDAAV-------RLQLRCSEKSD------------- 357
Query: 144 MDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLG 203
+E+A+Q + RLLV ++++GCL+G
Sbjct: 358 ------------------------------SELAEQ------SYTTRLLVSTSRIGCLIG 381
Query: 204 KGGCVIKQI-------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNS 250
KGG +I +I + +P A +E+VQI+G +D R AL I+ +L N
Sbjct: 382 KGGSIITEIRRTSRANIRILSKENVPKVAAEDEEMVQISGGLDVARHALVQIATRLKANF 441
Query: 251 PRDHESIPGNPTG-PSHPLP 269
S+ P+ P HPLP
Sbjct: 442 FEREGSLSAFPSVIPYHPLP 461
>gi|413953981|gb|AFW86630.1| hypothetical protein ZEAMMB73_253509 [Zea mays]
Length = 667
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 156/539 (28%), Positives = 264/539 (48%), Gaps = 64/539 (11%)
Query: 154 SKVQKALLLVFERMVEVEPETEVAD-------QENTKSSKFVLRLLVLSTQVGCLLGKGG 206
S Q+ALL+V R++E + + D +++ K RL+V VGCLLGKGG
Sbjct: 151 SPAQEALLMVHRRILETDADDGDEDGEYGPRGKDSRDRGKTTTRLIVPKMHVGCLLGKGG 210
Query: 207 CVIKQI--------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPR 252
+I+Q+ P C S+EVVQ+ G+ + V+KA+ +I+ +L ++ R
Sbjct: 211 KIIEQMRMETKTHIRILPRDQHTPRCVSLSEEVVQVVGDGNCVKKAVAIITDRLKESLHR 270
Query: 253 DHESIPGNPTGPSHPLP---DHSVSSQGAPY--ATGHRDVADIHLPMPPSIPKF--HESG 305
D G P + D+ SQ Y + G D + M P +F ++
Sbjct: 271 DRGPFRGRMNSPEPRISQEDDYLGVSQMPAYEESLGRSDQIRNNTSMEPPGYEFDSNDGK 330
Query: 306 VLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIV 365
V++ P + + FR+LC +++V ++ I+ L+ + G D+++ + ++G+++R+++
Sbjct: 331 VIEHPDILYDDIIFRILCPNDKVDNLVATNDGILEMLQADVGVDVRLSDIIAGSDERVVI 390
Query: 366 ISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIA 425
I+ PD + Q+AVL +QT I PD ++ + TRLLV S++I C G+ GS ++
Sbjct: 391 ITSREGPDHELFPAQEAVLHIQTHIVDLGPD-KDNIITTRLLVPSSEIACFDGREGS-LS 448
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPS 485
++++ + A ++IL K+ +P CA E++E++ I GE A + AL Q+TT+LR +R+
Sbjct: 449 DIQRQTSANVQILPKEDLPLCALESDELIQIVGEISAARNALIQVTTKLRSFLYREMSGP 508
Query: 486 INRPLNPTFLDQVSPF------PSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFH 539
I N +SP P+ +S S S+H D+ G GSF
Sbjct: 509 IQVG-NINVHGAISPVAGSPGGPNLGNDMPMSAYHQASQLATSWHSKDS--GGSASGSF- 564
Query: 540 PHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSL 599
D S + I R G P + +E VV+P S
Sbjct: 565 --DQGSNIIDEI-RQGATKRF--AVPLVTRSTLE-------------------VVIPNSA 600
Query: 600 VPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMS 658
V + G+ L QI +IS A +T+ + +P E V+ ISGTPEQ A++L+Q F++S
Sbjct: 601 VASLTMRAGSKLAQISEISGATVTLAEDRPDILEKVVRISGTPEQASKAENLLQGFILS 659
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 112/245 (45%), Gaps = 28/245 (11%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLI-VISGPAHPDD--- 374
FR+LC + + G + ++ ++G + V +G R+I + G D
Sbjct: 91 FRILCPECKAYGF---PPGFVAKVRDDSGALVTVHPPFAGDYVRVIETVDGARREADGRP 147
Query: 375 -RISAPQDAVLRVQTRIARAI--------------PDNREQ-TVMTRLLVASNQIGCLLG 418
S Q+A+L V RI D+R++ TRL+V +GCLLG
Sbjct: 148 PMFSPAQEALLMVHRRILETDADDGDEDGEYGPRGKDSRDRGKTTTRLIVPKMHVGCLLG 207
Query: 419 KGGSIIAEMRKLSGAYIRILGKDQ-IPKCASENEEVVLINGEFEAVQEALFQITTRLRHH 477
KGG II +MR + +IRIL +DQ P+C S +EEVV + G+ V++A+ IT RL+
Sbjct: 208 KGGKIIEQMRMETKTHIRILPRDQHTPRCVSLSEEVVQVVGDGNCVKKAVAIITDRLKES 267
Query: 478 FFRDAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGS 537
RD P R +P ++S ++G ++ P + G S + PP
Sbjct: 268 LHRDRGPFRGRMNSPE--PRISQEDDYLGVSQM--PAYEESLGRSDQIRNNTSMEPPGYE 323
Query: 538 FHPHD 542
F +D
Sbjct: 324 FDSND 328
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 90/213 (42%), Gaps = 69/213 (32%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
I+FR+LCP K+D ++ + ++ + D GV +R+ + ++GSDER+V+I + +
Sbjct: 342 IIFRILCPNDKVDNLVATNDGILEMLQADVGVDVRLSDIIAGSDERVVIITSREGP---- 397
Query: 106 ENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFE 165
+ E Q+A+L +
Sbjct: 398 --------------------------------------------DHELFPAQEAVLHIQT 413
Query: 166 RMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCV------------IKQID 213
+V++ P+ K + RLLV S+++ C G+ G + I +
Sbjct: 414 HIVDLGPD---------KDNIITTRLLVPSSEIACFDGREGSLSDIQRQTSANVQILPKE 464
Query: 214 KLPTCALASDEVVQITGEVDTVRKALKLISHQL 246
LP CAL SDE++QI GE+ R AL ++ +L
Sbjct: 465 DLPLCALESDELIQIVGEISAARNALIQVTTKL 497
>gi|242078463|ref|XP_002444000.1| hypothetical protein SORBIDRAFT_07g005630 [Sorghum bicolor]
gi|241940350|gb|EES13495.1| hypothetical protein SORBIDRAFT_07g005630 [Sorghum bicolor]
Length = 629
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 195/706 (27%), Positives = 317/706 (44%), Gaps = 140/706 (19%)
Query: 9 KRPHDDDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIMFRVLCPVSKIDGVIGKDGEMM 68
KRP H E +E+ + + Q S + G +++R+LCP S I VIGK+G ++
Sbjct: 7 KRPR---QHREYEREERKDQHKRPFPHAQESSNNDGLVLYRILCPDSLIGSVIGKNGNVI 63
Query: 69 SQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASVADE 128
+ I Q T ++V + G+D+R++++ ++ L+A ++ +E
Sbjct: 64 NAIRQQTSAKVKVVDPYPGADKRVILVYCYVKHRD----LDAEVDDNE------------ 107
Query: 129 SDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVE-VEPETEVADQENTKSSKF 187
Q ALL V +V+ + +D++NT+ +
Sbjct: 108 -----------------------PVCAAQDALLRVHNAIVDTLHRNRRDSDKKNTEEAN- 143
Query: 188 VLRLLVLSTQVGCLLGKGGCVIKQI----------------DKLPTCALASDEVVQITGE 231
+LV ++Q ++GK G VIK + D +CA++ D VQITG
Sbjct: 144 ---ILVPASQASNVIGKSGAVIKHLRSTSRAFIKVSPKDPSDATHSCAMSFDNFVQITGG 200
Query: 232 VDTVRKALKLIS-----HQLLDNSPRDHE------------SIPGNPTGPSHPLPDH--- 271
+ V+KAL +S H +N P + +P P + PD
Sbjct: 201 AEAVKKALFGVSTIIYKHPSKENIPLETSIPEPTPSIIIPSELPVYPASNFYSAPDAAIP 260
Query: 272 ----SVSSQGAPYATGHRDV-ADIH--LPMPPSI----PKFHESGVLDRPKPSPEILTFR 320
S+S G+ + + AD H LP+ PSI P + PK S E L FR
Sbjct: 261 SVHPSLSILGSTHHVPELALPADDHGRLPIYPSILPVIPTYSA------PKCSGE-LEFR 313
Query: 321 LLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQ 380
+LC ++G VIG+GGA I++++QE+G I V +A + E+ +I I+ DD SA
Sbjct: 314 VLCPSGKIGLVIGRGGATIKNIRQESGARIDVDDAKNDREESIITITSTEAIDDVKSAAV 373
Query: 381 DAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGK 440
+AVL +Q +I D + + RLLV + IGCL+G+GGSI+ +MRK + A I I
Sbjct: 374 EAVLLLQAKIN----DYEDDRMNLRLLVPNKVIGCLIGRGGSIVNDMRKKTKANILISKG 429
Query: 441 DQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSP 500
D+ P+ AS ++E+V ++GE + +++AL QI RLR +++ S N + V+
Sbjct: 430 DK-PRRASSSDELVEVSGEADKLRDALVQIILRLREDVLKESVESQNSDRDGKL--TVAT 486
Query: 501 FPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPHM 560
S G LS P + PH+ A + + R +
Sbjct: 487 SDSLYG-SSLSLPALL-----------------------PHNPQIAPLSYDRRGESERAL 522
Query: 561 ---PDMKPWGPQGLMEV-GGPMGFPDFVGPPHR----RVPVVVPRSLVPIIQGEDGACLK 612
P +G + G G P + + R + +P S + + G+ G L
Sbjct: 523 EVFPRTSSYGYSSMQVTDDGYGGLPSYTSKAYEEHLPRDEMTIPASGLSKVMGKRGTNLD 582
Query: 613 QIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMS 658
IR+IS A I I + K + + ISGT EQ +A++LI+AF+MS
Sbjct: 583 NIRKISGAHIEIIESKSSRHDHIAYISGTSEQRQSAENLIKAFIMS 628
>gi|297814608|ref|XP_002875187.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321025|gb|EFH51446.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 469
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 150/474 (31%), Positives = 225/474 (47%), Gaps = 89/474 (18%)
Query: 47 MFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSE 106
++R LCPV K +IG+ GE+ QI +T +R+ E + G DER+V I + N +ET
Sbjct: 19 VYRYLCPVRKAGSIIGRGGEIAKQIRSETKANMRINEALPGCDERVVTIYS--NSEET-- 74
Query: 107 NLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFER 166
N+ ED E AL V +
Sbjct: 75 ------------------------NRIEDD-------------EDFVCPAFDALFKVHDM 97
Query: 167 MVEVE---PETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI----------- 212
+V E E ++ +R+LV S Q+GCL+GKGG VI+++
Sbjct: 98 IVAEEFDNDGDYDNGDEYSERQTVTVRMLVPSDQIGCLIGKGGQVIQKLRNDTNAQIRVI 157
Query: 213 -DKLPTCALA--SDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLP 269
D LP CALA DE++QI G+ VR+AL ++ L DN P+ +
Sbjct: 158 NDNLPICALALSHDELLQIIGDPSAVREALYQVAFLLYDN-----------PSRFQNYFL 206
Query: 270 DHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVG 329
S + Q P + M P+I H++ R + + +C E VG
Sbjct: 207 SSSSTLQHQPGG----------ILMSPAITSSHKNYSAPRDAADARVFSICFICPAENVG 256
Query: 330 GVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIV-ISGPAHPDDRISAPQDAVLRVQT 388
GVIGKGG I +QE+G IKV + +D I+ IS +D+ S +A LR+QT
Sbjct: 257 GVIGKGGCFINQTRQESGATIKVHTPETDEDDDCIIFISAKEFFEDQ-SPTVNAALRLQT 315
Query: 389 RIARAI-PDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCA 447
R + + D+ + + TR+L+ S+Q+GCL+GKGG++I+EMR ++ A IRI + +P+ A
Sbjct: 316 RCSEKVGKDSSDSAISTRVLIPSSQVGCLIGKGGALISEMRSVTKANIRIFQGEDVPRIA 375
Query: 448 SENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLN--PTFLDQVS 499
ENEE+V I G +A +AL Q+ RLR + F ++R L PTF +S
Sbjct: 376 RENEEMVQITGSLDAAIKALTQVMLRLRANVF-----DMDRGLVLLPTFFPYIS 424
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 106/205 (51%), Gaps = 28/205 (13%)
Query: 302 HESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTED 361
+ + D E +R LC + G +IG+GG I + ++ ET ++++ EA+ G ++
Sbjct: 3 YSRNIYDNNGAGLEDTVYRYLCPVRKAGSIIGRGGEIAKQIRSETKANMRINEALPGCDE 62
Query: 362 RLIVISGPAHPDDRISAPQ-------DAVLRVQTRIA-----------RAIPDNREQTVM 403
R++ I + +RI + DA+ +V I + QTV
Sbjct: 63 RVVTIYSNSEETNRIEDDEDFVCPAFDALFKVHDMIVAEEFDNDGDYDNGDEYSERQTVT 122
Query: 404 TRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKC--ASENEEVVLINGEFE 461
R+LV S+QIGCL+GKGG +I ++R + A IR++ D +P C A ++E++ I G+
Sbjct: 123 VRMLVPSDQIGCLIGKGGQVIQKLRNDTNAQIRVI-NDNLPICALALSHDELLQIIGDPS 181
Query: 462 AVQEALFQIT-------TRLRHHFF 479
AV+EAL+Q+ +R +++F
Sbjct: 182 AVREALYQVAFLLYDNPSRFQNYFL 206
>gi|15237393|ref|NP_199431.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|9757739|dbj|BAB08264.1| unnamed protein product [Arabidopsis thaliana]
gi|14532588|gb|AAK64022.1| unknown protein [Arabidopsis thaliana]
gi|21280941|gb|AAM44907.1| unknown protein [Arabidopsis thaliana]
gi|332007968|gb|AED95351.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 644
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 196/678 (28%), Positives = 288/678 (42%), Gaps = 143/678 (21%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
+++R+LCP + VIGK G++++ I Q+T I+V + G ER++ I S ++K+
Sbjct: 44 VVYRILCPSGVMGSVIGKSGKVINLIRQETRARIKVVDPFPGCSERVITIFCSVSEKKDI 103
Query: 106 ENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFE 165
++E S L+ Q ALL V +
Sbjct: 104 VDIEYS----------------------------------ELDYSVPLCSAQAALLKVHD 129
Query: 166 RMVEVEPETEVADQENTKSSK---FVLRLLVLSTQVGCLLGKGGCVIKQI---------- 212
+V + ENTK + RLLV S+Q ++GK G +IK I
Sbjct: 130 AIVA----SLATAAENTKIDRDDFRECRLLVPSSQCSIVIGKSGSIIKNIRGRTRANVKV 185
Query: 213 ------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDH-------ESIPG 259
D TCA+ D +V I+GE ++V+KAL +S + SPR+ + +P
Sbjct: 186 VSKDVSDPSHTCAMDFDNIVMISGETESVKKALFAVSAIMYKVSPREQIPLDTTVQEVPA 245
Query: 260 NPTGPS----------HPLPDHSVSSQGA---------PYATGHRDVADIHLPMPPSIPK 300
+ PS +P D S+ GA P G + + ++P
Sbjct: 246 SIIIPSDLSIYPQAGLYPSQD-SIFQHGANVSSFIGTLPQGYGENAANPVPVFSASALPV 304
Query: 301 FHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSG-T 359
H G R E L +++C ++G VIGKGG I+ ++Q +G I+V ++ +
Sbjct: 305 VHGFGGSSRS----EKLAIKVICSSSKIGRVIGKGGLTIKGIRQASGSHIEVNDSRTNHD 360
Query: 360 EDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGK 419
+D +I ++ PDD S +AVL +Q +I D E V +LLV+S IGC++GK
Sbjct: 361 DDCVITVTATESPDDLKSMAVEAVLLLQEKI----NDEDEDKVKMQLLVSSKVIGCIIGK 416
Query: 420 GGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFF 479
GSII+E+RK + A I I + PKCA N+E+V I+GE V++AL QI RLR
Sbjct: 417 SGSIISEIRKRTKADIHISKGNNTPKCADPNDELVEISGEVSNVRDALIQIVLRLRDDVL 476
Query: 480 RDAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFH 539
RD G R PP S F + G P SF
Sbjct: 477 RDRET---------------------GSRN-QPPA-RSENNNFFSSSSSNTGLALPQSFM 513
Query: 540 PHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDF-VG------------- 585
A + RP M M P GG G+ F VG
Sbjct: 514 SSVPQVASVDFNRRPETGSSM-SMLPSS-------GGIYGYGSFPVGNTSYGSNSSYSSN 565
Query: 586 -----PPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISG 640
P + V +P + V + G G L IR+IS A I I+D K V +ISG
Sbjct: 566 LYGGLPQSTTMEVRIPANAVGKVMGRGGGNLDNIRRISGAMIEISDSKNSHGGRVALISG 625
Query: 641 TPEQTHAAQSLIQAFVMS 658
T EQ A++L QAF+MS
Sbjct: 626 TSEQKRTAENLFQAFIMS 643
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 96/193 (49%), Gaps = 24/193 (12%)
Query: 316 ILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDR 375
++ +R+LC +G VIGK G +I ++QET IKV++ G +R+I I
Sbjct: 43 VVVYRILCPSGVMGSVIGKSGKVINLIRQETRARIKVVDPFPGCSERVITIFCSVSEKKD 102
Query: 376 I--------------SAPQDAVLRVQTRIARAIPDNREQTVM-------TRLLVASNQIG 414
I + Q A+L+V I ++ E T + RLLV S+Q
Sbjct: 103 IVDIEYSELDYSVPLCSAQAALLKVHDAIVASLATAAENTKIDRDDFRECRLLVPSSQCS 162
Query: 415 CLLGKGGSIIAEMRKLSGAYIRILGKDQIP---KCASENEEVVLINGEFEAVQEALFQIT 471
++GK GSII +R + A ++++ KD CA + + +V+I+GE E+V++ALF ++
Sbjct: 163 IVIGKSGSIIKNIRGRTRANVKVVSKDVSDPSHTCAMDFDNIVMISGETESVKKALFAVS 222
Query: 472 TRLRHHFFRDAFP 484
+ R+ P
Sbjct: 223 AIMYKVSPREQIP 235
>gi|294464716|gb|ADE77865.1| unknown [Picea sitchensis]
Length = 348
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 136/371 (36%), Positives = 200/371 (53%), Gaps = 39/371 (10%)
Query: 294 MPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVM 353
M P + ++H P S E L FR+LC ++++G VIG+ G+II+SL+ + G IK+
Sbjct: 1 MLPEVVEYHARDY--EPSFSGEELVFRILCPNKKIGSVIGRAGSIIKSLQDDIGAKIKIT 58
Query: 354 EAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQI 413
+AV G+++R+I+IS +D +S Q+A+L +Q++I PD ++ + T+LL+ SNQ
Sbjct: 59 DAVPGSDERIIIISANEVLEDNLSPAQEALLHIQSQIVDLGPD-KDGVITTKLLIPSNQT 117
Query: 414 GCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTR 473
GCLLGKGG+II+EMRK + A IRIL ++ +P CA +++E+V I G+ A + AL Q+T+R
Sbjct: 118 GCLLGKGGAIISEMRKQTRANIRILPREDLPPCALDSDEMVQIVGDIRAARAALVQVTSR 177
Query: 474 LRHHFFRDAFPSINRPLNPTFLDQVSPFPSFIGRR-ELSPPGMYSNFGPSFHKF-----D 527
LR R+ I+ P FL S RR E S PG + G F D
Sbjct: 178 LRSFIHREI--GISGP----FLSSSSAPDPSSKRRLEPSSPGRSYSPGLGFQAGSRSLPD 231
Query: 528 AVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPP 587
A G P D A K GP+G G
Sbjct: 232 AWPSKEISGRNLPEYDERA----------------TKQGGPKG-------SGISTAGLVT 268
Query: 588 HRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHA 647
V VV+P + + G + QI QIS AK+ + + +PG ++ VI ISGTPEQTHA
Sbjct: 269 KTTVEVVIPEHAIAPLIANSGKGVAQIAQISGAKVNLLEVRPG-SDKVIEISGTPEQTHA 327
Query: 648 AQSLIQAFVMS 658
AQ L+QAF+++
Sbjct: 328 AQGLLQAFILN 338
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 102/229 (44%), Gaps = 71/229 (31%)
Query: 32 DYSENQPSKSFPGG-IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDE 90
+Y SF G ++FR+LCP KI VIG+ G ++ + D G I++ + V GSDE
Sbjct: 7 EYHARDYEPSFSGEELVFRILCPNKKIGSVIGRAGSIIKSLQDDIGAKIKITDAVPGSDE 66
Query: 91 RLVVIEASDNKKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSE 150
R+++I A++ VL D L
Sbjct: 67 RIIIISANE------------------------------------------VLEDNL--- 81
Query: 151 KETSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIK 210
S Q+ALL + ++V++ P+ K +LL+ S Q GCLLGKGG +I
Sbjct: 82 ---SPAQEALLHIQSQIVDLGPD---------KDGVITTKLLIPSNQTGCLLGKGGAIIS 129
Query: 211 QIDK-------------LPTCALASDEVVQITGEVDTVRKALKLISHQL 246
++ K LP CAL SDE+VQI G++ R AL ++ +L
Sbjct: 130 EMRKQTRANIRILPREDLPPCALDSDEMVQIVGDIRAARAALVQVTSRL 178
>gi|414870926|tpg|DAA49483.1| TPA: hypothetical protein ZEAMMB73_398324 [Zea mays]
Length = 541
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 147/470 (31%), Positives = 235/470 (50%), Gaps = 61/470 (12%)
Query: 10 RPHDDDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIMFRVLCPVSKIDGVIGKDGEMMS 69
R + T N + +K ++ S P ++R+LCPV KI V+G+ G+++
Sbjct: 7 RRSNSKKRTHSNSDDGKRKRLNTRHDDTSMFSEPIETIYRILCPVKKIGSVLGRGGDIVK 66
Query: 70 QISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASVADES 129
+ ++T IRV +++ G+DER+++I N+ E ++ EA+ E++
Sbjct: 67 ALREETKAKIRVADSIPGADERVIIIFNYQNEPEPTD--EAAEEKNS------------- 111
Query: 130 DNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVL 189
DGL + K Q ALL + +++V E EVA+ E ++S+ V
Sbjct: 112 ---------------DGLGNFKSHCFAQDALLKIHDKIVSDEIHDEVANDEKSESADDVT 156
Query: 190 -RLLVLSTQVGCLLGKGGCVIKQI-------------DKLPTCALASDEVVQITGEVDTV 235
R+LV QVGCLLGKGG +I+Q+ + LP CAL SDE+VQI+G V
Sbjct: 157 ARILVQGNQVGCLLGKGGSIIQQLRSNTGAGIRVLPSENLPQCALKSDELVQISGAPSLV 216
Query: 236 RKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRD--VADIHLP 293
RKAL IS +L + P P + D S + H + +H
Sbjct: 217 RKALYEISTRLHQH--------PRKENRPLEEIIDASTQRKRESPTLQHEYSMLPHLHSD 268
Query: 294 MPPSIPKF--HESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIK 351
P IP + SG P E + R+LC E +G VIGK GA +R ++Q+TG IK
Sbjct: 269 HTPPIPLLDPYRSGP-QYPVTETEEFSIRILCASELIGSVIGKSGANVRRVEQQTGARIK 327
Query: 352 VMEA-VSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVAS 410
V E + +RLI+IS P + IS +A++ + +++ P + + TRL+V S
Sbjct: 328 VQEIDKDASGERLIIISSNEIPAEPISPAIEALILLHDKVS--APSEKHHS-STRLVVPS 384
Query: 411 NQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEF 460
+++GC++G+GG +I +MR+ +GA IR+ K PK S ++E+V G+
Sbjct: 385 SKVGCIIGEGGKVITDMRRRTGAEIRVYSKADKPKYLSFDDELVQAAGQI 434
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 180/369 (48%), Gaps = 81/369 (21%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVI---SGPAHPDDR 375
+R+LC +++G V+G+GG I+++L++ET I+V +++ G ++R+I+I P D
Sbjct: 45 YRILCPVKKIGSVLGRGGDIVKALREETKAKIRVADSIPGADERVIIIFNYQNEPEPTDE 104
Query: 376 ISA---------------PQDAVLRVQTRI-ARAIPD---NREQT-----VMTRLLVASN 411
+ QDA+L++ +I + I D N E++ V R+LV N
Sbjct: 105 AAEEKNSDGLGNFKSHCFAQDALLKIHDKIVSDEIHDEVANDEKSESADDVTARILVQGN 164
Query: 412 QIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQIT 471
Q+GCLLGKGGSII ++R +GA IR+L + +P+CA +++E+V I+G V++AL++I+
Sbjct: 165 QVGCLLGKGGSIIQQLRSNTGAGIRVLPSENLPQCALKSDELVQISGAPSLVRKALYEIS 224
Query: 472 TRLRHHFFRDAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGG 531
TRL H ++ NRPL +D + +R+ P + +
Sbjct: 225 TRLHQHPRKE-----NRPLE-EIIDAST-------QRKRESPTLQHEY------------ 259
Query: 532 PPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPW--GPQGLMEVGGPMGFPDFVGPPHR 589
+ + H+H PP +P + P+ GPQ +P
Sbjct: 260 --------------SMLPHLHSDHTPP-IPLLDPYRSGPQ----------YP-VTETEEF 293
Query: 590 RVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITD-PKPGATETVIIISGTPEQTHAA 648
+ ++ L+ + G+ GA ++++ Q + A+I + + K + E +IIIS
Sbjct: 294 SIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIIISSNEIPAEPI 353
Query: 649 QSLIQAFVM 657
I+A ++
Sbjct: 354 SPAIEALIL 362
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 44/70 (62%)
Query: 591 VPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQS 650
+ + +P S + I G G L +IRQ+S A++ + + G++E+V+ I GT +Q AAQS
Sbjct: 454 IELRIPNSSLGSIVGAGGVNLAEIRQVSGARLRLHEAHAGSSESVVEIQGTLDQAKAAQS 513
Query: 651 LIQAFVMSET 660
L+Q F+ + +
Sbjct: 514 LLQGFISANS 523
>gi|242039239|ref|XP_002467014.1| hypothetical protein SORBIDRAFT_01g018300 [Sorghum bicolor]
gi|241920868|gb|EER94012.1| hypothetical protein SORBIDRAFT_01g018300 [Sorghum bicolor]
Length = 542
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 148/474 (31%), Positives = 239/474 (50%), Gaps = 68/474 (14%)
Query: 10 RPHDDDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIMFRVLCPVSKIDGVIGKDGEMMS 69
R + T N +++ +K ++ S P ++R+LCPV KI V+G+ G+++
Sbjct: 7 RRSNSKKRTYSNSEDRKRKRLNSRHDDTSMSSEPVETIYRILCPVKKIGSVLGRGGDVVK 66
Query: 70 QISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASVADES 129
+ ++T IRV + + G+DER+++I N+ E + DE+
Sbjct: 67 ALREETKAKIRVADPIPGADERVIIIFNYQNQPE---------------------LTDEA 105
Query: 130 DNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVL 189
K DGL + K Q ALL + +++V E VA +E ++S+ V
Sbjct: 106 AETK---------FSDGLGNMKPHCFAQDALLKIHDKIVADEIHDGVAHEEKSESADDVT 156
Query: 190 -RLLVLSTQVGCLLGKGGCVIKQI-------------DKLPTCALASDEVVQITGEVDTV 235
R+LV QVGCLLGKGG +I+Q+ + LP CAL SDE+VQI+G V
Sbjct: 157 ARILVQGNQVGCLLGKGGSIIQQLRSDTGAGIRVLPSEDLPQCALKSDELVQISGAPSLV 216
Query: 236 RKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPD----HSVSSQGAPYATGHRD--VAD 289
RKAL IS +L H+ +P + PL + + + +P H + +
Sbjct: 217 RKALYEISTRL-------HQ----HPRKENRPLEEIINASTQRKRESPILLQHENPMLPH 265
Query: 290 IHLPMPPSIPKF--HESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETG 347
+H PP IP + SG L E + R+LC E +G VIGK GA ++ ++Q+TG
Sbjct: 266 LHSDHPPPIPLLDPYRSG-LQYHVTETEEFSIRILCASELIGSVIGKSGANVKRVEQQTG 324
Query: 348 CDIKVMEA-VSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRL 406
IKV E + + LI++S P + IS +A++ + +++ A + R + TRL
Sbjct: 325 ARIKVQEIDKDASGESLIIVSSKEVPSEPISPAIEALILLHDKVS-APSEKRHSS--TRL 381
Query: 407 LVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEF 460
+V S+++GC+LG+GG +I EMR+ +GA IR+ K PK S ++E+V G+
Sbjct: 382 VVPSSKVGCILGEGGKVITEMRRRTGAEIRVYSKADKPKYLSFDDELVQTAGQI 435
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 177/367 (48%), Gaps = 76/367 (20%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVI----SGPAHPDD 374
+R+LC +++G V+G+GG ++++L++ET I+V + + G ++R+I+I + P D+
Sbjct: 45 YRILCPVKKIGSVLGRGGDVVKALREETKAKIRVADPIPGADERVIIIFNYQNQPELTDE 104
Query: 375 RISA--------------PQDAVLRVQTRI-ARAIPD---NREQT-----VMTRLLVASN 411
QDA+L++ +I A I D + E++ V R+LV N
Sbjct: 105 AAETKFSDGLGNMKPHCFAQDALLKIHDKIVADEIHDGVAHEEKSESADDVTARILVQGN 164
Query: 412 QIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQIT 471
Q+GCLLGKGGSII ++R +GA IR+L + +P+CA +++E+V I+G V++AL++I+
Sbjct: 165 QVGCLLGKGGSIIQQLRSDTGAGIRVLPSEDLPQCALKSDELVQISGAPSLVRKALYEIS 224
Query: 472 TRLRHHFFRDAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGG 531
TRL H ++ NRPL + +R+ P + + P
Sbjct: 225 TRLHQHPRKE-----NRPLEEII--------NASTQRKRESPILLQHENPMLP------- 264
Query: 532 PPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRV 591
H H DH PP +P + P+ V F +
Sbjct: 265 -------HLHSDH------------PPPIPLLDPYRSGLQYHVTETEEFS---------I 296
Query: 592 PVVVPRSLVPIIQGEDGACLKQIRQISDAKITITD-PKPGATETVIIISGTPEQTHAAQS 650
++ L+ + G+ GA +K++ Q + A+I + + K + E++II+S +
Sbjct: 297 RILCASELIGSVIGKSGANVKRVEQQTGARIKVQEIDKDASGESLIIVSSKEVPSEPISP 356
Query: 651 LIQAFVM 657
I+A ++
Sbjct: 357 AIEALIL 363
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 95/430 (22%), Positives = 168/430 (39%), Gaps = 109/430 (25%)
Query: 300 KFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA---- 355
+ H+ + S + +T R+L +VG ++GKGG+II+ L+ +TG I+V+ +
Sbjct: 138 EIHDGVAHEEKSESADDVTARILVQGNQVGCLLGKGGSIIQQLRSDTGAGIRVLPSEDLP 197
Query: 356 -VSGTEDRLIVISGP----------------AHPDDRISAPQDAVLRVQTRIARAIP--- 395
+ D L+ ISG HP + P + ++ T+ R P
Sbjct: 198 QCALKSDELVQISGAPSLVRKALYEISTRLHQHPRKE-NRPLEEIINASTQRKRESPILL 256
Query: 396 --DN-----------------------------REQTVMTRLLVASNQIGCLLGKGGSII 424
+N + R+L AS IG ++GK G+ +
Sbjct: 257 QHENPMLPHLHSDHPPPIPLLDPYRSGLQYHVTETEEFSIRILCASELIGSVIGKSGANV 316
Query: 425 AEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEA-----VQEALFQITTRL----- 474
+ + +GA I++ +I K AS +++ + E + EAL + ++
Sbjct: 317 KRVEQQTGARIKV---QEIDKDASGESLIIVSSKEVPSEPISPAIEALILLHDKVSAPSE 373
Query: 475 -RHHFFRDAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNF-GPSFHKFDAVGGP 532
RH R PS L + + + RR + +YS P + FD
Sbjct: 374 KRHSSTRLVVPSSK---VGCILGEGGKVITEMRRRTGAEIRVYSKADKPKYLSFDD-ELV 429
Query: 533 PPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVP 592
G H +D+ +GL G + +
Sbjct: 430 QTAGQIHGREDY------------------------RGLTSATGFLST----------IE 455
Query: 593 VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLI 652
+ +P S + I G G L +IRQIS A++ + + G++E+V+ I GT E+ AAQSL+
Sbjct: 456 LRIPNSSLESIVGVGGVNLAEIRQISGARLRLHEAHAGSSESVVEIQGTLEEAKAAQSLL 515
Query: 653 QAFVMSETET 662
Q F+ + + +
Sbjct: 516 QGFISANSRS 525
>gi|21553916|gb|AAM62999.1| unknown [Arabidopsis thaliana]
Length = 644
Score = 192 bits (488), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 197/678 (29%), Positives = 292/678 (43%), Gaps = 143/678 (21%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
+++R+LCP + VIGK G++++ I Q+T I+V + G ER++ I S ++K+
Sbjct: 44 VVYRILCPSGVMGSVIGKSGKVINLIRQETRARIKVVDPFPGCSERVITIFCSVSEKKDI 103
Query: 106 ENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFE 165
++E S L+ Q ALL V +
Sbjct: 104 VDIEYS----------------------------------ELDYSVPLCSAQAALLKVHD 129
Query: 166 RMVEVEPETEVADQENTKSSKFVLR---LLVLSTQVGCLLGKGGCVIKQI---------- 212
+V + ENTK + R LLV S+Q ++GK G +IK I
Sbjct: 130 AIVA----SLATAAENTKIDRDDFRECRLLVPSSQCSIVIGKSGSIIKNIRGRTRANVKV 185
Query: 213 ------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDH-------ESIPG 259
D TCA+ D +V I+GE ++V+KAL +S + SPR+ + +P
Sbjct: 186 VSKDASDPSHTCAMDFDNIVMISGETESVKKALFAVSAIMYKVSPREQIPLDTTVQEVPA 245
Query: 260 NPTGPS----------HPLPDHSVSSQGAPYAT-------GHRDVADIHLPM--PPSIPK 300
+ PS +P D S+ GA ++ G+ + A LP+ ++P
Sbjct: 246 SIIIPSDLSIYPQAGLYPSQD-SIFQHGANVSSFIGTLPQGYGENAANPLPVFSASALPV 304
Query: 301 FHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSG-T 359
H G R E L +++C ++G VIGKGG I+ ++Q +G I+V ++ +
Sbjct: 305 VHGFGGSSRS----EKLAIKVICASSKIGRVIGKGGLTIKGIRQASGSHIEVNDSRTNHD 360
Query: 360 EDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGK 419
+D +I ++ PDD S +AVL +Q +I D E V +LLV+S IGC++GK
Sbjct: 361 DDCVITVTATESPDDLKSMAVEAVLLLQEKI----NDEDEDKVKMQLLVSSKVIGCIIGK 416
Query: 420 GGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFF 479
GSII+E+RK + A I I + PK A N+E+V I+GE V++AL QI RLR
Sbjct: 417 SGSIISEIRKRTKADIHISKGNNTPKSADPNDELVEISGEVSNVRDALIQIVLRLRDDVL 476
Query: 480 RDAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFH 539
RD G R PP S F + G P SF
Sbjct: 477 RD---------------------RETGSRN-QPPA-RSENNNFFSSSSSNTGLALPQSFM 513
Query: 540 PHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDF-VG------------- 585
A + RP M M P GG G+ F VG
Sbjct: 514 SSVPQVASVDFDRRPETGSSM-SMLPSS-------GGIYGYGSFPVGNTSYGSNSSYSSN 565
Query: 586 -----PPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISG 640
P + V +P + V + G G L IR+IS A I I+D K V +ISG
Sbjct: 566 LYGGLPQSTTMEVRIPANAVGKVMGRGGGNLDNIRRISGAMIEISDSKNSHGGRVALISG 625
Query: 641 TPEQTHAAQSLIQAFVMS 658
T EQ A++L QAF+MS
Sbjct: 626 TSEQKRTAENLFQAFIMS 643
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 96/193 (49%), Gaps = 24/193 (12%)
Query: 316 ILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDR 375
++ +R+LC +G VIGK G +I ++QET IKV++ G +R+I I
Sbjct: 43 VVVYRILCPSGVMGSVIGKSGKVINLIRQETRARIKVVDPFPGCSERVITIFCSVSEKKD 102
Query: 376 I--------------SAPQDAVLRVQTRIARAIPDNREQTVM-------TRLLVASNQIG 414
I + Q A+L+V I ++ E T + RLLV S+Q
Sbjct: 103 IVDIEYSELDYSVPLCSAQAALLKVHDAIVASLATAAENTKIDRDDFRECRLLVPSSQCS 162
Query: 415 CLLGKGGSIIAEMRKLSGAYIRILGKDQIP---KCASENEEVVLINGEFEAVQEALFQIT 471
++GK GSII +R + A ++++ KD CA + + +V+I+GE E+V++ALF ++
Sbjct: 163 IVIGKSGSIIKNIRGRTRANVKVVSKDASDPSHTCAMDFDNIVMISGETESVKKALFAVS 222
Query: 472 TRLRHHFFRDAFP 484
+ R+ P
Sbjct: 223 AIMYKVSPREQIP 235
>gi|357496471|ref|XP_003618524.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355493539|gb|AES74742.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 553
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 155/457 (33%), Positives = 237/457 (51%), Gaps = 77/457 (16%)
Query: 47 MFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSE 106
+FR LCP KI +IG+ GE++ Q+ +T IR+ ETV G DER+V + +S ++ T
Sbjct: 48 VFRYLCPGRKIGSIIGRGGEIVKQLRVETKAKIRIGETVPGCDERVVTVYSSSDETNT-- 105
Query: 107 NLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFER 166
V++G +K S + AL + +R
Sbjct: 106 ------------------------------VDDG---------DKLVSPAEDALFKIHDR 126
Query: 167 MVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI-------------D 213
+V E +DQE + +LLV S Q+GC+LGKGG +++ + D
Sbjct: 127 VV---AEDLHSDQEEEGGPQVNAKLLVPSDQIGCVLGKGGQIVQNLRSETGAQIRILKDD 183
Query: 214 KLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDH----ESIP------GNPTG 263
+P CAL SDE+VQI+G+ V+KAL I+ +L N R ++P G+ G
Sbjct: 184 HVPACALRSDELVQISGDAAVVKKALHQIASRLHHNPSRTQHLLGSAVPSVYPSGGSLMG 243
Query: 264 PSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLC 323
P+ P ++ PY D D PP + S D S E + RL+C
Sbjct: 244 PTAGPPIVGMAPLVGPYGGYKSDTGD----WPP---RSMYSAPRDEISSSKE-FSVRLVC 295
Query: 324 HDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAV 383
+GGVIGKGG II ++Q++G IKV + G +D LI IS ++ S +A
Sbjct: 296 PTGNLGGVIGKGGGIINQIRQDSGATIKVDSSAKG-DDCLITISTKEFFEETFSPTVEAA 354
Query: 384 LRVQTRIA-RAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQ 442
+ +Q R + ++ D+ + TRLLV+S++IGCL+GKGGSII EMR+L+ + IRIL K+
Sbjct: 355 VLLQPRCSEKSERDSGIISFTTRLLVSSSRIGCLIGKGGSIITEMRRLTKSNIRILSKEN 414
Query: 443 IPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFF 479
+PK AS+++E+V I+G+ + ++AL Q+ TRLR + F
Sbjct: 415 LPKIASDDDEMVQISGDLDVAKDALVQVLTRLRANLF 451
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 109/190 (57%), Gaps = 18/190 (9%)
Query: 315 EILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHP-- 372
E FR LC ++G +IG+GG I++ L+ ET I++ E V G ++R++ + +
Sbjct: 45 EDTVFRYLCPGRKIGSIIGRGGEIVKQLRVETKAKIRIGETVPGCDERVVTVYSSSDETN 104
Query: 373 -----DDRISAPQDAVLRVQTR-IARAIPDNREQ----TVMTRLLVASNQIGCLLGKGGS 422
D +S +DA+ ++ R +A + ++E+ V +LLV S+QIGC+LGKGG
Sbjct: 105 TVDDGDKLVSPAEDALFKIHDRVVAEDLHSDQEEEGGPQVNAKLLVPSDQIGCVLGKGGQ 164
Query: 423 IIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRH------ 476
I+ +R +GA IRIL D +P CA ++E+V I+G+ V++AL QI +RL H
Sbjct: 165 IVQNLRSETGAQIRILKDDHVPACALRSDELVQISGDAAVVKKALHQIASRLHHNPSRTQ 224
Query: 477 HFFRDAFPSI 486
H A PS+
Sbjct: 225 HLLGSAVPSV 234
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 100/235 (42%), Gaps = 70/235 (29%)
Query: 49 RVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENL 108
R++CP + GVIGK G +++QI QD+G TI+V+ + G D+ L+ I T E
Sbjct: 292 RLVCPTGNLGGVIGKGGGIINQIRQDSGATIKVDSSAKG-DDCLITIS-------TKEFF 343
Query: 109 EASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMV 168
E E + V+ A+LL
Sbjct: 344 E----------------------------------------ETFSPTVEAAVLL------ 357
Query: 169 EVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI-------------DKL 215
+P + ++ F RLLV S+++GCL+GKGG +I ++ + L
Sbjct: 358 --QPRCSEKSERDSGIISFTTRLLVSSSRIGCLIGKGGSIITEMRRLTKSNIRILSKENL 415
Query: 216 PTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGN-PTGPSHPLP 269
P A DE+VQI+G++D + AL + +L N ++PG P P P P
Sbjct: 416 PKIASDDDEMVQISGDLDVAKDALVQVLTRLRANLFDREGAVPGFLPVLPYIPAP 470
>gi|357496469|ref|XP_003618523.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355493538|gb|AES74741.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 569
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 154/457 (33%), Positives = 236/457 (51%), Gaps = 77/457 (16%)
Query: 47 MFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSE 106
+FR LCP KI +IG+ GE++ Q+ +T IR+ ETV G DER+V + +S ++ T
Sbjct: 48 VFRYLCPGRKIGSIIGRGGEIVKQLRVETKAKIRIGETVPGCDERVVTVYSSSDETNT-- 105
Query: 107 NLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFER 166
V++G +K S + AL + +R
Sbjct: 106 ------------------------------VDDG---------DKLVSPAEDALFKIHDR 126
Query: 167 MVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI-------------D 213
+V E +DQE + +LLV S Q+GC+LGKGG +++ + D
Sbjct: 127 VV---AEDLHSDQEEEGGPQVNAKLLVPSDQIGCVLGKGGQIVQNLRSETGAQIRILKDD 183
Query: 214 KLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDH----ESIP------GNPTG 263
+P CAL SDE+VQI+G+ V+KAL I+ +L N R ++P G+ G
Sbjct: 184 HVPACALRSDELVQISGDAAVVKKALHQIASRLHHNPSRTQHLLGSAVPSVYPSGGSLMG 243
Query: 264 PSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLC 323
P+ P ++ PY D D P+ S D S E + RL+C
Sbjct: 244 PTAGPPIVGMAPLVGPYGGYKSDTGDWP-------PRSMYSAPRDEISSSKE-FSVRLVC 295
Query: 324 HDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAV 383
+GGVIGKGG II ++Q++G IKV + G +D LI IS ++ S +A
Sbjct: 296 PTGNLGGVIGKGGGIINQIRQDSGATIKVDSSAKG-DDCLITISTKEFFEETFSPTVEAA 354
Query: 384 LRVQTRIA-RAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQ 442
+ +Q R + ++ D+ + TRLLV+S++IGCL+GKGGSII EMR+L+ + IRIL K+
Sbjct: 355 VLLQPRCSEKSERDSGIISFTTRLLVSSSRIGCLIGKGGSIITEMRRLTKSNIRILSKEN 414
Query: 443 IPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFF 479
+PK AS+++E+V I+G+ + ++AL Q+ TRLR + F
Sbjct: 415 LPKIASDDDEMVQISGDLDVAKDALVQVLTRLRANLF 451
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 109/190 (57%), Gaps = 18/190 (9%)
Query: 315 EILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHP-- 372
E FR LC ++G +IG+GG I++ L+ ET I++ E V G ++R++ + +
Sbjct: 45 EDTVFRYLCPGRKIGSIIGRGGEIVKQLRVETKAKIRIGETVPGCDERVVTVYSSSDETN 104
Query: 373 -----DDRISAPQDAVLRVQTR-IARAIPDNREQ----TVMTRLLVASNQIGCLLGKGGS 422
D +S +DA+ ++ R +A + ++E+ V +LLV S+QIGC+LGKGG
Sbjct: 105 TVDDGDKLVSPAEDALFKIHDRVVAEDLHSDQEEEGGPQVNAKLLVPSDQIGCVLGKGGQ 164
Query: 423 IIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRH------ 476
I+ +R +GA IRIL D +P CA ++E+V I+G+ V++AL QI +RL H
Sbjct: 165 IVQNLRSETGAQIRILKDDHVPACALRSDELVQISGDAAVVKKALHQIASRLHHNPSRTQ 224
Query: 477 HFFRDAFPSI 486
H A PS+
Sbjct: 225 HLLGSAVPSV 234
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 100/235 (42%), Gaps = 70/235 (29%)
Query: 49 RVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENL 108
R++CP + GVIGK G +++QI QD+G TI+V+ + G D+ L+ I T E
Sbjct: 292 RLVCPTGNLGGVIGKGGGIINQIRQDSGATIKVDSSAKG-DDCLITIS-------TKEFF 343
Query: 109 EASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMV 168
E E + V+ A+LL
Sbjct: 344 E----------------------------------------ETFSPTVEAAVLL------ 357
Query: 169 EVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI-------------DKL 215
+P + ++ F RLLV S+++GCL+GKGG +I ++ + L
Sbjct: 358 --QPRCSEKSERDSGIISFTTRLLVSSSRIGCLIGKGGSIITEMRRLTKSNIRILSKENL 415
Query: 216 PTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGN-PTGPSHPLP 269
P A DE+VQI+G++D + AL + +L N ++PG P P P P
Sbjct: 416 PKIASDDDEMVQISGDLDVAKDALVQVLTRLRANLFDREGAVPGFLPVLPYIPAP 470
>gi|255583245|ref|XP_002532387.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223527911|gb|EEF29999.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 688
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 153/469 (32%), Positives = 234/469 (49%), Gaps = 74/469 (15%)
Query: 43 PGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIE--ASDN 100
PG + FRV+C S I G+IG+ G +SQI +DTG T+ +E V GSD R++ I AS
Sbjct: 22 PGQVAFRVVCHASIIGGLIGRSGSAISQIRRDTGCTVHCDEQVQGSDHRVITIVGPASPG 81
Query: 101 KKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKE-TSKVQKA 159
K+ T L ++ N EE EKE S Q+A
Sbjct: 82 KRIT---LNSTTCHDHNGAEEE---------------------------EKELVSVAQEA 111
Query: 160 LLLVFERMVEVEPETEV-----ADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDK 214
++ V ERM EV+ + E + N+ + LL +TQ+G ++GKGG + ++ +
Sbjct: 112 VIRVCERMWEVDGQRERRGGVDNNSNNSGLGEGYCGLLADTTQIGAVVGKGGKNVLRMRR 171
Query: 215 L----------PTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGP 264
P CA D+++QITG + V+KAL ++ L D P + + PT
Sbjct: 172 ESGADIRFLPPPHCASKDDQLIQITGSILAVKKALVAVTDCLHDCPPYEKD-----PTLL 226
Query: 265 SHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFH--ESGVLDRPKPSPEI----LT 318
PL S + P+A ++ + P+ + H S + P E ++
Sbjct: 227 MRPLERASHLASSDPHAEFFPHLSSLLPPLSGNSGTSHPLSSDAGEDPNQDAEAVRHEVS 286
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISA 378
FRLLC + G +IGK G I+R+L+ ETG I +S + +R++ IS + + S
Sbjct: 287 FRLLCSNGAAGSIIGKKGTIVRTLQNETGASIMFAAPMSMSGERVVTISALENLESWHSP 346
Query: 379 PQDAVLRVQTRIARAIPDNREQ----------TVMTRLLVASNQIGCLLGKGGS--IIAE 426
Q+A + V AR++ + E+ TV RLLVAS+ + CL+ KGG+ I +E
Sbjct: 347 AQNAAILV---FARSVEHDIEKGHPSGLIEGATVTARLLVASDAVCCLIEKGGTGNIDSE 403
Query: 427 MRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLR 475
M ++SGA IRIL +QI CASE++ V+ I GE++ VQ ALF +T +LR
Sbjct: 404 MIEVSGADIRILDGEQIMACASEDDVVIEITGEYKNVQNALFMVTGKLR 452
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 52/69 (75%)
Query: 591 VPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQS 650
+ +VVP + + GEDG+ L ++RQIS AK+ + +P G + +++ISGTP+QT+AAQS
Sbjct: 619 IELVVPEDTIGSVYGEDGSNLARLRQISGAKVEVREPSSGKSGRIVVISGTPDQTNAAQS 678
Query: 651 LIQAFVMSE 659
L+QAF++++
Sbjct: 679 LLQAFILAD 687
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 97/243 (39%), Gaps = 66/243 (27%)
Query: 26 SQKLAGDYSE--NQPSKSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEE 83
S L+ D E NQ +++ + FR+LC +IGK G ++ + +TG +I
Sbjct: 263 SHPLSSDAGEDPNQDAEAVRHEVSFRLLCSNGAAGSIIGKKGTIVRTLQNETGASIMFAA 322
Query: 84 TVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVL 143
+S S ER+V I A ENLE+
Sbjct: 323 PMSMSGERVVTISAL-------ENLES--------------------------------- 342
Query: 144 MDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLG 203
S Q A +LVF R VE + E + + + RLLV S V CL+
Sbjct: 343 --------WHSPAQNAAILVFARSVEHDIE-KGHPSGLIEGATVTARLLVASDAVCCLIE 393
Query: 204 KGG-------------CVIKQID--KLPTCALASDEVVQITGEVDTVRKALKLISHQLLD 248
KGG I+ +D ++ CA D V++ITGE V+ AL +++ +L
Sbjct: 394 KGGTGNIDSEMIEVSGADIRILDGEQIMACASEDDVVIEITGEYKNVQNALFMVTGKLRG 453
Query: 249 NSP 251
SP
Sbjct: 454 LSP 456
>gi|413933965|gb|AFW68516.1| hypothetical protein ZEAMMB73_983755 [Zea mays]
Length = 537
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 151/474 (31%), Positives = 234/474 (49%), Gaps = 67/474 (14%)
Query: 9 KRPHDDDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIMFRVLCPVSKIDGVIGKDGEMM 68
KR H + + +GK K +L+ + + S S P ++R+LCP KI V+G+ G+++
Sbjct: 13 KRRHSNSD----DGKRK--RLSSRHDDTSMS-SEPIETIYRILCPAKKIGSVLGRGGDIV 65
Query: 69 SQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASVADE 128
+ ++T IRV +++ G+DER+++I N+ E + DE
Sbjct: 66 KALREETKAKIRVADSIPGADERVIIIFNYQNQPE---------------------LTDE 104
Query: 129 SDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSKFV 188
+ K+ + DGL + K Q ALL + +++V E EVA E+ S
Sbjct: 105 AAEKQ---------ISDGLGNMKPHCFAQDALLKIHDKIVADEIYDEVAHDES--SDDVT 153
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQI-------------DKLPTCALASDEVVQITGEVDTV 235
R+LV QVGCLLGKGG +I+Q+ + LP CAL SDE+VQI+G V
Sbjct: 154 ARILVQGNQVGCLLGKGGSIIQQLRSDTGAGIRVLSSENLPQCALQSDELVQISGAPSLV 213
Query: 236 RKALKLIS---HQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIHL 292
RKAL IS HQ R E I T H P + P+ H L
Sbjct: 214 RKALYEISTRLHQHPRKENRPLEQIIDASTQRKHESPTLQHENPMLPHLHSHHPPPIPLL 273
Query: 293 PMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV 352
S P++ P E + R+LC E +G VIGK GA +R ++Q+TG IKV
Sbjct: 274 DPYRSGPQY--------PVSETEEFSIRILCASELIGSVIGKSGANVRRVEQQTGARIKV 325
Query: 353 MEA-VSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASN 411
E + +RLI++S P + IS +A++ + +++ + + TRL+V SN
Sbjct: 326 QEIDKDASGERLIIVSSNEIPTEPISPTIEALILLHDKVS---ASSEKHHSSTRLVVPSN 382
Query: 412 QIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQE 465
++GC+LG+GG +I EMR+ +GA IR+ K PK S +E+V G+ +++
Sbjct: 383 KVGCILGEGGQVITEMRRRTGAEIRVYSKADKPKYLSFGDELVQAAGQIHGLED 436
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 118/196 (60%), Gaps = 29/196 (14%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVI----SGPAHPDD 374
+R+LC +++G V+G+GG I+++L++ET I+V +++ G ++R+I+I + P D+
Sbjct: 45 YRILCPAKKIGSVLGRGGDIVKALREETKAKIRVADSIPGADERVIIIFNYQNQPELTDE 104
Query: 375 ----RISA----------PQDAVLRVQTRIA------RAIPDNREQTVMTRLLVASNQIG 414
+IS QDA+L++ +I D V R+LV NQ+G
Sbjct: 105 AAEKQISDGLGNMKPHCFAQDALLKIHDKIVADEIYDEVAHDESSDDVTARILVQGNQVG 164
Query: 415 CLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRL 474
CLLGKGGSII ++R +GA IR+L + +P+CA +++E+V I+G V++AL++I+TRL
Sbjct: 165 CLLGKGGSIIQQLRSDTGAGIRVLSSENLPQCALQSDELVQISGAPSLVRKALYEISTRL 224
Query: 475 RHHFFRDAFPSINRPL 490
H ++ NRPL
Sbjct: 225 HQHPRKE-----NRPL 235
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 55/106 (51%), Gaps = 6/106 (5%)
Query: 561 PDMKPWGPQGLMEVGGPMGFPDFVGPPH------RRVPVVVPRSLVPIIQGEDGACLKQI 614
P +G + + G G D+ G P + + +P S + I G G L +I
Sbjct: 415 PKYLSFGDELVQAAGQIHGLEDYRGLPSASGRFSSTIELRIPNSSLESIVGVGGVNLAEI 474
Query: 615 RQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSET 660
RQIS A++ + + G++E+V+ I GT +Q AAQSL++ F+ + +
Sbjct: 475 RQISGARLRLHEAHAGSSESVVEIQGTLDQAKAAQSLLEGFISANS 520
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 85/435 (19%), Positives = 168/435 (38%), Gaps = 92/435 (21%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVS------GSDERLVVIEASD 99
+ R+L +++ ++GK G ++ Q+ DTG IRV + + SDE + + A
Sbjct: 152 VTARILVQGNQVGCLLGKGGSIIQQLRSDTGAGIRVLSSENLPQCALQSDELVQISGAPS 211
Query: 100 NKKETSENLEASIE---RSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKV 156
++ + + R EN E+ + D S +K +S + E +
Sbjct: 212 LVRKALYEISTRLHQHPRKENRPLEQ--IIDASTQRKHESPT----------LQHENPML 259
Query: 157 QKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKLP 216
+ ++P +++ +F +R+L S +G ++GK G ++++++
Sbjct: 260 PHLHSHHPPPIPLLDPYRSGPQYPVSETEEFSIRILCASELIGSVIGKSGANVRRVEQQT 319
Query: 217 TCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQ 276
+ E+ + D + L ++S IP P P+
Sbjct: 320 GARIKVQEI-----DKDASGERLIIVSSN----------EIPTEPISPTIEA-------- 356
Query: 277 GAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGG 336
+ +H + S K H S RL+ +VG ++G+GG
Sbjct: 357 ----------LILLHDKVSASSEKHHSS--------------TRLVVPSNKVGCILGEGG 392
Query: 337 AIIRSLKQETGCDIKVMEAVSGTE-----DRLIVISGPAHPDDRISAPQDAVLRVQTRIA 391
+I +++ TG +I+V + D L+ +G H + A R + I
Sbjct: 393 QVITEMRRRTGAEIRVYSKADKPKYLSFGDELVQAAGQIHGLEDYRGLPSASGRFSSTIE 452
Query: 392 RAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENE 451
IP++ +++ +G GG +AE+R++SGA +R+ A +E
Sbjct: 453 LRIPNSSLESI--------------VGVGGVNLAEIRQISGARLRLH-----EAHAGSSE 493
Query: 452 EVVLINGEFEAVQEA 466
VV I G + + A
Sbjct: 494 SVVEIQGTLDQAKAA 508
>gi|296086352|emb|CBI31941.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 176/517 (34%), Positives = 254/517 (49%), Gaps = 114/517 (22%)
Query: 3 LPLTPSKRPHDDDNHTEPNGKEK-SQKLAG---DYSENQPSKSFPGG------------- 45
LP T +NH + +EK S +AG DY + S+S GG
Sbjct: 40 LPTTQLNNTRAPNNHPRYSTREKISLLMAGQRNDYGKRSHSQSDYGGNGGSKRRNPGDDK 99
Query: 46 ---------IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIE 96
++R LCPV KI +IG+ G++ Q+ +T IR+ ET+ G +ER+V I
Sbjct: 100 EQHGIGVEDTVYRYLCPVRKIGSIIGRGGDIAKQLRSETKSNIRIGETMPGCEERVVTIY 159
Query: 97 ASDNKKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKV 156
+S E N D+ G ++ S
Sbjct: 160 SSS----------------------------EETNPFGDT---GELV----------SPA 178
Query: 157 QKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI---- 212
Q AL V +R+V E AD+E ++ + +R+LV S Q+GC++GKGG VI+ I
Sbjct: 179 QDALFRVHDRIVAGELP---ADEEPEEAQQVTVRMLVPSDQIGCVIGKGGQVIQNIRSET 235
Query: 213 ---------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTG 263
+ LP CAL+SDE++QI G+ VRKAL HQL + R HE NP+
Sbjct: 236 RAQIRILKDEHLPPCALSSDELLQIIGDASVVRKAL----HQL---ASRLHE----NPSR 284
Query: 264 PSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLC 323
H L +SS Y +G D H R + S + + RL+C
Sbjct: 285 SQHLL----LSSSPNMYQSG----GDWS----------HSYYSARRDESSAKEFSLRLVC 326
Query: 324 HDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAV 383
+GGVIGKGG II+ ++QE+G IKV + + +D +I IS +D S DA
Sbjct: 327 PTGNIGGVIGKGGGIIKQIRQESGASIKVDSSSAEGDDCIIFISAKEFFED-PSPTIDAA 385
Query: 384 LRVQTRIA-RAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQ 442
LR+Q R + +A ++ + V TRLLV S++IGCL+GKGG+II+EMR ++ A IRIL K+
Sbjct: 386 LRLQPRCSEKAERESSDSVVTTRLLVPSSRIGCLIGKGGAIISEMRSVTRANIRILSKEN 445
Query: 443 IPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFF 479
+PK ASE++E+V I GE AL Q+T RL+ + F
Sbjct: 446 LPKVASEDDEMVQITGELNVASNALLQVTLRLKANLF 482
>gi|357145086|ref|XP_003573519.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 632
Score = 188 bits (478), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 193/723 (26%), Positives = 315/723 (43%), Gaps = 169/723 (23%)
Query: 6 TPSKRPHDDDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIMFRVLCPVSKIDGVIGKDG 65
T R HD + G+++ ++ A EN + +++R+LCP I VIGK+G
Sbjct: 8 TSQHRDHDRE------GRDEKRRPAVHTQENSSNDEL---VVYRILCPDKVIGSVIGKNG 58
Query: 66 EMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASV 125
++++ I Q T ++V + G+D+R++++ + ++ + +++ RE
Sbjct: 59 KVINSIRQQTNAKVKVVDPYPGADKRVILVYCHVHHRDLTHRDIDV---DDDDDREPVCA 115
Query: 126 ADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSS 185
A Q ALL V + +VE +D E
Sbjct: 116 A------------------------------QNALLKVHDAIVEALAINSDSDDEEAN-- 143
Query: 186 KFVLRLLVLSTQVGCLLGKGGCVIKQIDKLP----------------TCALASDEVVQIT 229
+LV ++Q ++GK G VIK++ + +CA++ D VQIT
Sbjct: 144 -----ILVPASQAASVIGKSGSVIKRLRSISKSSIKVRPKDPSEVTHSCAMSFDNFVQIT 198
Query: 230 GEVDTVRKALKLISHQLLDNSPRDH------------------ESIPGNPTGPSHPLPDH 271
G+ V+KAL +S ++ SP +P P + L D
Sbjct: 199 GDARAVKKALFAVS-AIIYKSPSKEIIPLETSVQELPPSIIIPSELPVYPASNFYSLSDG 257
Query: 272 SVSS-------QGAPY-----------ATGHRDVADIHLPMPPSIPKFHESGVLDRPKPS 313
++ S GAP+ A H + I+ M P+IP + PK S
Sbjct: 258 AMPSGHPSLPILGAPHHVSRIPEFTVPADAHGRLP-IYQSMVPAIPTYST------PKGS 310
Query: 314 PEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPD 373
++L R++C +++G VIGKGG I+S+++E+G +I V +A + E+ +I ++ D
Sbjct: 311 GDLL-LRVVCPGDKIGLVIGKGGMTIKSIRKESGANIDVDDAKNDREESIITVTSTEATD 369
Query: 374 DRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
D SA +AVL +Q +I I D + RLLV N IGCL+GKGGSI+ +MR S A
Sbjct: 370 DVKSAAVEAVLLLQAKINDGIEDR----MHIRLLVPGNVIGCLIGKGGSIVNDMRNKSKA 425
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFP--------- 484
I I K P+ AS ++E+V + GE + +++AL QI RLR +D+
Sbjct: 426 IIHI-SKGSKPRRASSSDELVEVFGEVDKLRDALVQIVLRLREDVLKDSVERQNSDKDGK 484
Query: 485 ---SINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAV--GGPPPPGSFH 539
+I P+ + + PS R++SP Y G D S
Sbjct: 485 RTIAITEPMYSSNFSMPALLPST---RQVSPLS-YDQRGEVERGLDVYPRSSSYRYSSLQ 540
Query: 540 PHDD----HSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVV 595
DD HS++ K +G + PD + +++
Sbjct: 541 AVDDGYGAHSSYTS--------------KSYGGR----------RPD--------IEMII 568
Query: 596 PRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAF 655
P S + + G+ G L IR+IS A I I + K + V ISGTPEQ +A++LI+AF
Sbjct: 569 PASGLSKVIGKRGTNLDNIRKISGADIEIIESKSSRHDHVAHISGTPEQRQSAENLIRAF 628
Query: 656 VMS 658
+MS
Sbjct: 629 IMS 631
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 164/376 (43%), Gaps = 56/376 (14%)
Query: 315 EILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDD 374
E++ +R+LC D+ +G VIGK G +I S++Q+T +KV++ G + R+I++ H D
Sbjct: 37 ELVVYRILCPDKVIGSVIGKNGKVINSIRQQTNAKVKVVDPYPGADKRVILVYCHVHHRD 96
Query: 375 R---------------ISAPQDAVLRVQTRIARAIPDNREQ-TVMTRLLVASNQIGCLLG 418
+ A Q+A+L+V I A+ N + +LV ++Q ++G
Sbjct: 97 LTHRDIDVDDDDDREPVCAAQNALLKVHDAIVEALAINSDSDDEEANILVPASQAASVIG 156
Query: 419 KGGSIIAEMRKLSGAYIRILGKD---QIPKCASENEEVVLINGEFEAVQEALFQITTRLR 475
K GS+I +R +S + I++ KD CA + V I G+ AV++ALF ++ +
Sbjct: 157 KSGSVIKRLRSISKSSIKVRPKDPSEVTHSCAMSFDNFVQITGDARAVKKALFAVSAII- 215
Query: 476 HHFFRDAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPP 535
+ S ++ + P PS I EL P SNF + G P
Sbjct: 216 -------YKSPSKEIIPLETSVQELPPSIIIPSEL-PVYPASNF------YSLSDGAMPS 261
Query: 536 GSFHPHDDHSAFMHHIHR----------PGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVG 585
G HP HH+ R G P M P P P G D +
Sbjct: 262 G--HPSLPILGAPHHVSRIPEFTVPADAHGRLPIYQSMVPAIPT----YSTPKGSGDLL- 314
Query: 586 PPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQT 645
+ VV P + ++ G+ G +K IR+ S A I + D K E++I ++ T
Sbjct: 315 -----LRVVCPGDKIGLVIGKGGMTIKSIRKESGANIDVDDAKNDREESIITVTSTEATD 369
Query: 646 HAAQSLIQAFVMSETE 661
+ ++A ++ + +
Sbjct: 370 DVKSAAVEAVLLLQAK 385
>gi|359473301|ref|XP_002272287.2| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera]
Length = 517
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 160/447 (35%), Positives = 232/447 (51%), Gaps = 88/447 (19%)
Query: 47 MFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSE 106
++R LCPV KI +IG+ G++ Q+ +T IR+ ET+ G +ER+V I +S
Sbjct: 44 VYRYLCPVRKIGSIIGRGGDIAKQLRSETKSNIRIGETMPGCEERVVTIYSSS------- 96
Query: 107 NLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFER 166
E N D+ G ++ S Q AL V +R
Sbjct: 97 ---------------------EETNPFGDT---GELV----------SPAQDALFRVHDR 122
Query: 167 MVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI-------------D 213
+V E AD+E ++ + +R+LV S Q+GC++GKGG VI+ I +
Sbjct: 123 IVAGELP---ADEEPEEAQQVTVRMLVPSDQIGCVIGKGGQVIQNIRSETRAQIRILKDE 179
Query: 214 KLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSV 273
LP CAL+SDE++QI G+ VRKAL HQL + R HE NP+ H L +
Sbjct: 180 HLPPCALSSDELLQIIGDASVVRKAL----HQL---ASRLHE----NPSRSQHLL----L 224
Query: 274 SSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIG 333
SS Y +G D H R + S + + RL+C +GGVIG
Sbjct: 225 SSSPNMYQSG----GDWS----------HSYYSARRDESSAKEFSLRLVCPTGNIGGVIG 270
Query: 334 KGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIA-R 392
KGG II+ ++QE+G IKV + + +D +I IS +D S DA LR+Q R + +
Sbjct: 271 KGGGIIKQIRQESGASIKVDSSSAEGDDCIIFISAKEFFED-PSPTIDAALRLQPRCSEK 329
Query: 393 AIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEE 452
A ++ + V TRLLV S++IGCL+GKGG+II+EMR ++ A IRIL K+ +PK ASE++E
Sbjct: 330 AERESSDSVVTTRLLVPSSRIGCLIGKGGAIISEMRSVTRANIRILSKENLPKVASEDDE 389
Query: 453 VVLINGEFEAVQEALFQITTRLRHHFF 479
+V I GE AL Q+T RL+ + F
Sbjct: 390 MVQITGELNVASNALLQVTLRLKANLF 416
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 101/172 (58%), Gaps = 12/172 (6%)
Query: 315 EILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDD 374
E +R LC ++G +IG+GG I + L+ ET +I++ E + G E+R++ I + +
Sbjct: 41 EDTVYRYLCPVRKIGSIIGRGGDIAKQLRSETKSNIRIGETMPGCEERVVTIYSSSEETN 100
Query: 375 -------RISAPQDAVLRVQTRI-ARAIPDNRE----QTVMTRLLVASNQIGCLLGKGGS 422
+S QDA+ RV RI A +P + E Q V R+LV S+QIGC++GKGG
Sbjct: 101 PFGDTGELVSPAQDALFRVHDRIVAGELPADEEPEEAQQVTVRMLVPSDQIGCVIGKGGQ 160
Query: 423 IIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRL 474
+I +R + A IRIL + +P CA ++E++ I G+ V++AL Q+ +RL
Sbjct: 161 VIQNIRSETRAQIRILKDEHLPPCALSSDELLQIIGDASVVRKALHQLASRL 212
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 119/283 (42%), Gaps = 75/283 (26%)
Query: 18 TEPNGKEKSQKLAGDYSENQPSKSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGV 77
+ PN + + Y + +S R++CP I GVIGK G ++ QI Q++G
Sbjct: 226 SSPNMYQSGGDWSHSYYSARRDESSAKEFSLRLVCPTGNIGGVIGKGGGIIKQIRQESGA 285
Query: 78 TIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASVADESDNKKEDSV 137
+I+V+ + + D+ ++ I A + ++ S ++A++ R + +++++ + DSV
Sbjct: 286 SIKVDSSSAEGDDCIIFISAKEFFEDPSPTIDAAL-------RLQPRCSEKAERESSDSV 338
Query: 138 NEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQ 197
RLLV S++
Sbjct: 339 -------------------------------------------------VTTRLLVPSSR 349
Query: 198 VGCLLGKGGCVIKQI-------------DKLPTCALASDEVVQITGEVDTVRKALKLISH 244
+GCL+GKGG +I ++ + LP A DE+VQITGE++ AL ++
Sbjct: 350 IGCLIGKGGAIISEMRSVTRANIRILSKENLPKVASEDDEMVQITGELNVASNALLQVTL 409
Query: 245 QLLDNSPRDHESIPGN-PTGPSHPLPDHSVSSQGAPYATGHRD 286
+L N +I PT P P+ D S G+ Y G RD
Sbjct: 410 RLKANLFEREGAIAAIPPTLPYLPMSDM---SDGSKY--GSRD 447
>gi|147790774|emb|CAN72739.1| hypothetical protein VITISV_027256 [Vitis vinifera]
Length = 668
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 190/674 (28%), Positives = 310/674 (45%), Gaps = 115/674 (17%)
Query: 23 KEKSQKLAGDYSENQPSKSFPGG----IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVT 78
K K G ++ + +SF ++R+LCP KI GVIGK G ++ + ++T
Sbjct: 46 KRKGSNKRGRWNNSSHEQSFGNSQVADTVYRILCPSKKIGGVIGKGGGIVKALREETQAK 105
Query: 79 IRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASVADESDNKKEDSVN 138
I V ++V GSDER+++I ++ K N ER E E
Sbjct: 106 ITVADSVPGSDERVIIIYSAPTKNPKEHNSNEDPEREEEQDHMEPHCP------------ 153
Query: 139 EGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQV 198
Q AL+ V ER++E + +++ +++ RLLV + V
Sbjct: 154 -----------------AQDALMKVHERIIEEDLFGGTEFEDDNENTVVTARLLVPNNMV 196
Query: 199 GCLLGKGGCVIKQI-------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQ 245
GCLLGK G VI+++ + LPTCA++SDE+VQI+G+ +KAL +S
Sbjct: 197 GCLLGKRGDVIQRLRSETGANIRVLPAEHLPTCAMSSDELVQISGKPAVAKKALYEVSTL 256
Query: 246 LLDNSPRDH--ESIP---------------GNPTGPSHPL-PDHSVSSQGAP---YATGH 284
L N +D S P GN P +P+ + + +SQG P + G+
Sbjct: 257 LHQNPRKDKPPSSFPMSFGGQGFHPPGASMGNMPPPGNPMWSNRNSNSQGVPPMPWMGGY 316
Query: 285 RDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQ 344
R P +P + + + ++LC ++GGVIGKGG ++ L+Q
Sbjct: 317 RS-------QPSVVPGGFDGVHAGHGGEASGEFSMKILCPAGKIGGVIGKGGFNVKQLQQ 369
Query: 345 ETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMT 404
ETG I V +A++ +E+R+I +S + S +A+L++Q + + + + + T
Sbjct: 370 ETGASIHVEDALAESEERVIRVSSFEALWNPRSQTIEAILQLQNKTSEY---SDKGGMTT 426
Query: 405 RLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQ 464
RLLV S+++GC+LG+GG +I EMR+ + A IR+ K+ PKCAS++EE+V I+G F +
Sbjct: 427 RLLVPSSKVGCILGQGGHVINEMRRRTQADIRVYSKEDKPKCASDDEELVQISGNFGVAK 486
Query: 465 EALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFH 524
+AL +I +RLR RDA N + P V P P F H
Sbjct: 487 DALAEIASRLRVRCLRDA----NGGVEPA---PVGPVPGF------------------GH 521
Query: 525 KFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFV 584
GG P F + + G + P P P G+ +
Sbjct: 522 PGKLPGGLPSSSGALGAGSSGGF--ELSKGGGLEYEPQSYPVPPAA-------TGYHNVN 572
Query: 585 GPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQ 644
++P + V + G G + + +++ A++ + DP+ G +E V+ I G+ E
Sbjct: 573 SSMESKIP----NNSVSSVIGMGGGNVANMSEMAGARVKLQDPQSGGSECVVEIRGSSEH 628
Query: 645 THAAQSLIQAFVMS 658
AAQS++QAF+ S
Sbjct: 629 LTAAQSILQAFMAS 642
>gi|359488265|ref|XP_003633728.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera]
gi|296087281|emb|CBI33655.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 190/674 (28%), Positives = 314/674 (46%), Gaps = 115/674 (17%)
Query: 23 KEKSQKLAGDYSENQPSKSFPGG----IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVT 78
K K G ++ + +SF ++R+LCP KI GVIGK G ++ + ++T
Sbjct: 18 KRKGSNKRGRWNNSSHEQSFGNSQVADTVYRILCPSKKIGGVIGKGGGIVKALREETQAK 77
Query: 79 IRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASVADESDNKKEDSVN 138
I V ++V GSDER+++I ++ K N KE N
Sbjct: 78 ITVADSVPGSDERVIIIYSAPTK-----------------------------NPKEHDSN 108
Query: 139 EGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQV 198
E + + + + Q AL+ V ER++E + +++ +++ RLLV + V
Sbjct: 109 EDPEMEEEQDHMEPHCPAQDALMKVHERIIEEDLFGGTEFEDDNENTVVTARLLVPNNMV 168
Query: 199 GCLLGKGGCVIKQI-------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQ 245
GCLLGK G VI+++ + LPTCA++SDE+VQI+G+ +KAL +S
Sbjct: 169 GCLLGKRGDVIQRLRSETGANIRVLPAEHLPTCAMSSDELVQISGKPAVAKKALYEVSTL 228
Query: 246 LLDNSPRDH--ESIP---------------GNPTGPSHPL-PDHSVSSQGA---PYATGH 284
L N +D S P GN P +P+ + + +SQG P+ G+
Sbjct: 229 LHQNPRKDKPPSSFPMSFGGQGFHPPGASMGNMPPPGNPMWSNRNSNSQGVPPMPWMGGY 288
Query: 285 RDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQ 344
R P +P + + + ++LC ++GGVIGKGG ++ L+Q
Sbjct: 289 RS-------QPSVVPGGFDGVHAGHGGEASGEFSMKILCPAGKIGGVIGKGGFNVKQLQQ 341
Query: 345 ETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMT 404
ETG I V +A++ +E+R+I +S + S +A+L++Q + + + + + T
Sbjct: 342 ETGASIHVEDALAESEERVIRVSSFEALWNPRSQTIEAILQLQNKTSEY---SDKGGMTT 398
Query: 405 RLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQ 464
RLLV S+++GC+LG+GG +I EMR+ + A IR+ K+ PKCAS++EE+V I+G F +
Sbjct: 399 RLLVPSSKVGCILGQGGHVINEMRRRTQADIRVYSKEDKPKCASDDEELVQISGNFGVAK 458
Query: 465 EALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFH 524
+AL +I +RLR RDA G E +P G FG H
Sbjct: 459 DALAEIASRLRVRCLRDAN----------------------GGVEPAPVGPVPGFG---H 493
Query: 525 KFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFV 584
GG P F + + G + P P P G+ +
Sbjct: 494 PGKLPGGLPSSSGALGAGSSGGF--ELSKGGGLEYEPQSYPVPPAA-------TGYHNVN 544
Query: 585 GPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQ 644
++P + V + G G + + +++ A++ + DP+ G +E V+ I G+ E
Sbjct: 545 SSMESKIP----NNSVSSVIGMGGGNVANMSEMAGARVKLQDPQSGGSECVVEIRGSSEH 600
Query: 645 THAAQSLIQAFVMS 658
AAQS++QAF+ S
Sbjct: 601 LTAAQSILQAFMAS 614
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 109/375 (29%), Positives = 183/375 (48%), Gaps = 63/375 (16%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVI-SGPA-HPDDRI 376
+R+LC +++GGVIGKGG I+++L++ET I V ++V G+++R+I+I S P +P +
Sbjct: 47 YRILCPSKKIGGVIGKGGGIVKALREETQAKITVADSVPGSDERVIIIYSAPTKNPKEHD 106
Query: 377 SA-----------------PQDAVLRVQTRI-------ARAIPDNREQTVMT-RLLVASN 411
S QDA+++V RI D+ E TV+T RLLV +N
Sbjct: 107 SNEDPEMEEEQDHMEPHCPAQDALMKVHERIIEEDLFGGTEFEDDNENTVVTARLLVPNN 166
Query: 412 QIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQIT 471
+GCLLGK G +I +R +GA IR+L + +P CA ++E+V I+G+ ++AL++++
Sbjct: 167 MVGCLLGKRGDVIQRLRSETGANIRVLPAEHLPTCAMSSDELVQISGKPAVAKKALYEVS 226
Query: 472 TRLRHHFFRDAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGG 531
T L + +D P S FP G + PPG ++G
Sbjct: 227 TLLHQNPRKDKPP--------------SSFPMSFGGQGFHPPGA------------SMGN 260
Query: 532 PPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHR-- 589
PPPG+ + +S + G+PP MP M + Q + GG G G
Sbjct: 261 MPPPGNPMWSNRNS------NSQGVPP-MPWMGGYRSQPSVVPGGFDGVHAGHGGEASGE 313
Query: 590 -RVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAA 648
+ ++ P + + G+ G +KQ++Q + A I + D + E VI +S +
Sbjct: 314 FSMKILCPAGKIGGVIGKGGFNVKQLQQETGASIHVEDALAESEERVIRVSSFEALWNPR 373
Query: 649 QSLIQAFVMSETETT 663
I+A + + +T+
Sbjct: 374 SQTIEAILQLQNKTS 388
>gi|413933966|gb|AFW68517.1| hypothetical protein ZEAMMB73_983755 [Zea mays]
Length = 428
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 150/465 (32%), Positives = 231/465 (49%), Gaps = 67/465 (14%)
Query: 9 KRPHDDDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIMFRVLCPVSKIDGVIGKDGEMM 68
KR H + + +GK K +L+ + + S S P ++R+LCP KI V+G+ G+++
Sbjct: 13 KRRHSNSD----DGKRK--RLSSRHDDTSMS-SEPIETIYRILCPAKKIGSVLGRGGDIV 65
Query: 69 SQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASVADE 128
+ ++T IRV +++ G+DER+++I N+ E + DE
Sbjct: 66 KALREETKAKIRVADSIPGADERVIIIFNYQNQPE---------------------LTDE 104
Query: 129 SDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSKFV 188
+ K+ + DGL + K Q ALL + +++V E EVA E+ S
Sbjct: 105 AAEKQ---------ISDGLGNMKPHCFAQDALLKIHDKIVADEIYDEVAHDES--SDDVT 153
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQI-------------DKLPTCALASDEVVQITGEVDTV 235
R+LV QVGCLLGKGG +I+Q+ + LP CAL SDE+VQI+G V
Sbjct: 154 ARILVQGNQVGCLLGKGGSIIQQLRSDTGAGIRVLSSENLPQCALQSDELVQISGAPSLV 213
Query: 236 RKALKLIS---HQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIHL 292
RKAL IS HQ R E I T H P + P+ H L
Sbjct: 214 RKALYEISTRLHQHPRKENRPLEQIIDASTQRKHESPTLQHENPMLPHLHSHHPPPIPLL 273
Query: 293 PMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV 352
S P++ P E + R+LC E +G VIGK GA +R ++Q+TG IKV
Sbjct: 274 DPYRSGPQY--------PVSETEEFSIRILCASELIGSVIGKSGANVRRVEQQTGARIKV 325
Query: 353 MEA-VSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASN 411
E + +RLI++S P + IS +A++ + +++ + + + TRL+V SN
Sbjct: 326 QEIDKDASGERLIIVSSNEIPTEPISPTIEALILLHDKVSAS---SEKHHSSTRLVVPSN 382
Query: 412 QIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLI 456
++GC+LG+GG +I EMR+ +GA IR+ K PK S +E+V +
Sbjct: 383 KVGCILGEGGQVITEMRRRTGAEIRVYSKADKPKYLSFGDELVQV 427
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 118/196 (60%), Gaps = 29/196 (14%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVI----SGPAHPDD 374
+R+LC +++G V+G+GG I+++L++ET I+V +++ G ++R+I+I + P D+
Sbjct: 45 YRILCPAKKIGSVLGRGGDIVKALREETKAKIRVADSIPGADERVIIIFNYQNQPELTDE 104
Query: 375 ----RISA----------PQDAVLRVQTRIA------RAIPDNREQTVMTRLLVASNQIG 414
+IS QDA+L++ +I D V R+LV NQ+G
Sbjct: 105 AAEKQISDGLGNMKPHCFAQDALLKIHDKIVADEIYDEVAHDESSDDVTARILVQGNQVG 164
Query: 415 CLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRL 474
CLLGKGGSII ++R +GA IR+L + +P+CA +++E+V I+G V++AL++I+TRL
Sbjct: 165 CLLGKGGSIIQQLRSDTGAGIRVLSSENLPQCALQSDELVQISGAPSLVRKALYEISTRL 224
Query: 475 RHHFFRDAFPSINRPL 490
H ++ NRPL
Sbjct: 225 HQHPRKE-----NRPL 235
>gi|326517934|dbj|BAK07219.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 632
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 186/683 (27%), Positives = 300/683 (43%), Gaps = 159/683 (23%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
+++R+LCP I VIGK G++++ I Q T ++V + G+D+R++++ ++
Sbjct: 38 VVYRILCPDKVIGSVIGKGGKVINSIRQQTNAKVKVVDPYPGADKRVILVYCYVKHRDV- 96
Query: 106 ENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFE 165
+ + I +++ RE A Q ALL V +
Sbjct: 97 --MLSDINADDDDDREPVCAA------------------------------QNALLKVHD 124
Query: 166 RMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI------------- 212
+V T+ +D + +LV ++Q ++GK G VIK++
Sbjct: 125 AIVGALAVTDDSDDKEAN-------ILVPASQAASVIGKSGSVIKKLRSVSKSFIKVKPK 177
Query: 213 ---DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGN--------- 260
D +CA++ D VQITG+ V+KAL +S ++ P E+IP
Sbjct: 178 DPSDVTHSCAMSFDNFVQITGDARAVKKALFAVS-TIMYKCP-SKENIPLETSIDELPPT 235
Query: 261 -------PTGPSHPLPDHSVSSQGAPYATGHRDVADI-------HLP------------- 293
P P+ L +SVS P +GH ++ + H+P
Sbjct: 236 IILPSELPVYPASSL--YSVSDASMP--SGHPSLSILGATSRGSHVPDFTVPIDTHGGLP 291
Query: 294 ----MPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCD 349
M P++P ++ PK S E+L R++C +++G VIGK G I+++++E+G
Sbjct: 292 IYQSMVPAVPTYNT------PKCSGELL-LRVVCPGDKIGLVIGKAGMTIKNIRKESGAR 344
Query: 350 IKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVA 409
+ V +A + E+ +I +S DD SA +AVL +Q +I D E + RLLV
Sbjct: 345 VDVDDAKNDKEESIITVSSTEATDDVKSAAVEAVLLLQAKIN----DETEDRMHLRLLVP 400
Query: 410 SNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQ 469
N IGCL+GKGGSII +MR S A I I K P+ AS ++E+V + GE + +++AL Q
Sbjct: 401 GNVIGCLIGKGGSIINDMRNKSKAIIHI-SKGTKPRKASSSDELVEVFGEVDKLRDALVQ 459
Query: 470 ITTRLRHHFFRDAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAV 529
I RLR +D+ +GR+ N G A
Sbjct: 460 IVLRLREDVLKDS----------------------VGRQ---------NSGKDGKLTVAT 488
Query: 530 GGPPPPGSF-----HPHDDHSAFMHHIHR------PGMPPHMPDMKPWGPQGLMEVGGPM 578
P SF P+ + H R + P + P+ ++ G +
Sbjct: 489 TEPVSSSSFPMPALLPYSQQITPLRHDQRGEVERGSNVFPRSSLYHGYSPREAVDDGFGV 548
Query: 579 GFPDFVGPPHRRVP---VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETV 635
P RRVP + +P S + + G+ G L IR+IS A I I + K + V
Sbjct: 549 RSSYTSKPYGRRVPDMEMFIPSSGLSKVMGKHGTNLDNIRKISGADIEILESKSSRHDHV 608
Query: 636 IIISGTPEQTHAAQSLIQAFVMS 658
I GTPEQ +A++LI+AF+MS
Sbjct: 609 AHIFGTPEQWQSAENLIKAFIMS 631
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 108/378 (28%), Positives = 176/378 (46%), Gaps = 54/378 (14%)
Query: 315 EILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPA-HPD 373
E++ +R+LC D+ +G VIGKGG +I S++Q+T +KV++ G + R+I++ H D
Sbjct: 36 ELVVYRILCPDKVIGSVIGKGGKVINSIRQQTNAKVKVVDPYPGADKRVILVYCYVKHRD 95
Query: 374 DRIS--------------APQDAVLRVQTRI--ARAIPDNREQTVMTRLLVASNQIGCLL 417
+S A Q+A+L+V I A A+ D+ + +LV ++Q ++
Sbjct: 96 VMLSDINADDDDDREPVCAAQNALLKVHDAIVGALAVTDDSDDK-EANILVPASQAASVI 154
Query: 418 GKGGSIIAEMRKLSGAYIRILGK---DQIPKCASENEEVVLINGEFEAVQEALFQITTRL 474
GK GS+I ++R +S ++I++ K D CA + V I G+ AV++ALF ++T +
Sbjct: 155 GKSGSVIKKLRSVSKSFIKVKPKDPSDVTHSCAMSFDNFVQITGDARAVKKALFAVSTIM 214
Query: 475 RHHFFRDAFPSINRPLNPTFLDQVSPFPSFIGRRELSPP-GMYS---NFGPSFHKFDAVG 530
++ N PL T +D++ P + P +YS PS H ++
Sbjct: 215 YKCPSKE-----NIPLE-TSIDELPPTIILPSELPVYPASSLYSVSDASMPSGHPSLSIL 268
Query: 531 GPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRR 590
G GS P F I G P M P P P G R
Sbjct: 269 GATSRGSHVPD-----FTVPIDTHGGLPIYQSMVPAVPT--------YNTPKCSGELLLR 315
Query: 591 VPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQS 650
VV P + ++ G+ G +K IR+ S A++ + D K E++I +S T E T +S
Sbjct: 316 --VVCPGDKIGLVIGKAGMTIKNIRKESGARVDVDDAKNDKEESIITVSST-EATDDVKS 372
Query: 651 -------LIQAFVMSETE 661
L+QA + ETE
Sbjct: 373 AAVEAVLLLQAKINDETE 390
>gi|297804330|ref|XP_002870049.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297315885|gb|EFH46308.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 605
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 188/703 (26%), Positives = 299/703 (42%), Gaps = 157/703 (22%)
Query: 9 KRPHDDDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIMFRVLCPVSKIDGVIGKDGEMM 68
KR + N+ E N +K + S N + +++R+LCP+ + GVIGK G+++
Sbjct: 6 KRKQNQRNNNESNRNQKRR-----ISNNGEKINRDELVIYRILCPIDVVGGVIGKSGKVI 60
Query: 69 SQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASVADE 128
+ I +T I+V + + G +R++ I S +K+ E
Sbjct: 61 NAIRHNTKAKIKVFDQLHGCSQRVITIYCSVKEKKEEE---------------------- 98
Query: 129 SDNKKEDSVNEGSVLMDGLNSEKE-TSKVQKALLLVFERMVEVEPETEVADQENTKSSKF 187
+D + SE E Q ALL V++ +V + E D+++ K
Sbjct: 99 ---------------IDFMKSETEPLCCAQDALLKVYDAIVASDEENIKIDRDDKKE--- 140
Query: 188 VLRLLVLSTQVGCLLGKGGCVIKQI----------------DKLPTCALASDEVVQITGE 231
LLV S+Q L+GK G IK+I D CA+ D +V I+GE
Sbjct: 141 -CLLLVPSSQSFSLIGKAGENIKRIRSTTRASVKVVSKDVSDPSHVCAMDYDNIVVISGE 199
Query: 232 VDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLP---------------------D 270
++V+KAL +S L +PR+H IP + TG P D
Sbjct: 200 PESVKKALFAVSAILYKINPREH--IPLDSTGQDVPASIIVSSDLSNSVYPQTGFYSNQD 257
Query: 271 HSVSSQ-GAPYATGHRDVADIH-------LPMP---PSIPKFHESGVLDRPKPSPEILTF 319
H + + G P V++ PMP S+P H G R K L
Sbjct: 258 HILQQRAGVPSYFNALSVSNFQGYAETAANPMPVFASSLPVTHGFGGSSRSKE----LVL 313
Query: 320 RLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS--GTEDRLIVISGPAHPDDRIS 377
++LC + VIGKGG+ I+ +++ +G I+V ++ + G ++ +I+++ PDD S
Sbjct: 314 KVLCPLSNITRVIGKGGSTIKRIRETSGSCIEVNDSRTKCGDDECVIIVTATESPDDMKS 373
Query: 378 APQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRI 437
+AVL +Q I D + V +L V+S IGC++GK GS+I E+RK + A I I
Sbjct: 374 MAVEAVLLLQ----EYINDEDAEKVKMQLFVSSKDIGCVIGKSGSVINEIRKRTNANICI 429
Query: 438 LGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFF--RDAFPSINRPLNPTFL 495
+ +++V + GE +V+ A+ QI RLR RD+ + +P P
Sbjct: 430 --------SKGKKDDLVEVAGEISSVRNAIIQIVLRLREDVLGDRDSVAASRKP--PART 479
Query: 496 DQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPG 555
D S F P M S FH + GSF
Sbjct: 480 DNYSLFSGSSNAGYTLPSFMSSASSSGFHGY---------GSF----------------- 513
Query: 556 MPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIR 615
P G V P F P + +++P + + + G+ G L+ IR
Sbjct: 514 ---------PAGDNVFGSV-SPYSFGRL--PSSSALEILIPANAMSKVMGKGGGNLENIR 561
Query: 616 QISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMS 658
+IS A I I+D K + + ++SGT EQ A++L+QAF+MS
Sbjct: 562 RISGAMIEISDSKTSQGDHIALLSGTLEQMRCAENLVQAFIMS 604
>gi|255584811|ref|XP_002533123.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223527086|gb|EEF29268.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 405
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 124/343 (36%), Positives = 191/343 (55%), Gaps = 36/343 (10%)
Query: 177 ADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI-------------DKLPTCALASD 223
+D ++ + RL+V S Q+GC++GKGG +++ I + LP CAL++D
Sbjct: 3 SDDDSEGGHQVTARLIVPSDQIGCIIGKGGQIVQNIRSETGAQIRILKDEHLPPCALSTD 62
Query: 224 EVVQITGEVDTVRKALKLISHQLLDNSPRDH----ESIP------GNPTGPSHPLPDHSV 273
E+VQI+GEV V+KAL I+ +L +N R ++P G+ GP+ P +
Sbjct: 63 ELVQISGEVAVVKKALYQIATRLHENPSRTQHLLFSAVPNVYPATGSLIGPTGA-PIVGI 121
Query: 274 SSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIG 333
+ + Y D D + S P R + S + + R++C +GGVIG
Sbjct: 122 APLMSTYGGYKGDAGDWSRSL-YSAP---------RDELSSKEFSLRIVCPTGNIGGVIG 171
Query: 334 KGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARA 393
KGG II ++QE+G IKV + + +D LI +S DD+ S +A +R+Q R +
Sbjct: 172 KGGTIINQIRQESGAVIKVDSSTAEGDDCLITVSAKEFFDDQYSPTIEAAIRLQPRCSEK 231
Query: 394 IP-DNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEE 452
I D+ + TRLLV +++IGCLLGKGG II EMRK++ A IRILGKD +PK ASE++E
Sbjct: 232 IARDSGLISFTTRLLVPTSRIGCLLGKGGVIINEMRKVTKANIRILGKDNLPKVASEDDE 291
Query: 453 VVLINGEFEAVQEALFQITTRLRHHFF-RDAFPSINRPLNPTF 494
+V I+G+ + ++AL ++ RLR + F R+ S P+ P
Sbjct: 292 MVQISGDLDVAKDALTHVSRRLRANAFDREGAVSTFLPVLPYL 334
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 100/230 (43%), Gaps = 56/230 (24%)
Query: 30 AGDYS--------ENQPSKSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRV 81
AGD+S + SK F R++CP I GVIGK G +++QI Q++G I+V
Sbjct: 135 AGDWSRSLYSAPRDELSSKEFS----LRIVCPTGNIGGVIGKGGTIINQIRQESGAVIKV 190
Query: 82 EETVSGSDERLVVIEASD-NKKETSENLEASIERSENNGREEASVADESDNKKEDSVNEG 140
+ + + D+ L+ + A + + S +EA+I R +A +S
Sbjct: 191 DSSTAEGDDCLITVSAKEFFDDQYSPTIEAAIRLQP---RCSEKIARDS----------- 236
Query: 141 SVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGC 200
GL S LL+ R+ + + V E K +K +R
Sbjct: 237 -----GLIS------FTTRLLVPTSRIGCLLGKGGVIINEMRKVTKANIR---------- 275
Query: 201 LLGKGGCVIKQIDKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNS 250
+LGK D LP A DE+VQI+G++D + AL +S +L N+
Sbjct: 276 ILGK--------DNLPKVASEDDEMVQISGDLDVAKDALTHVSRRLRANA 317
>gi|357447239|ref|XP_003593895.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
gi|357447243|ref|XP_003593897.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
gi|355482943|gb|AES64146.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
gi|355482945|gb|AES64148.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
Length = 631
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 179/660 (27%), Positives = 284/660 (43%), Gaps = 118/660 (17%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
I +R+LCP I VIGK+G++++ I Q++ ++V + G+ R++ I KE
Sbjct: 42 IAYRILCPNEVIGSVIGKNGKVINSIRQESRAKVKVVDPFPGAKHRVITIFCHVKNKEEI 101
Query: 106 ENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFE 165
E + ++EK Q AL+ V
Sbjct: 102 EIEDEF------------------------------------DNEKPLCAAQDALIKVHS 125
Query: 166 RMVEVEPETEVA-DQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI------------ 212
+ E A D E + +K ++LV S+Q L+GK G IKQ+
Sbjct: 126 ---AISNSIETAGDSEKKRKNKDECQILVPSSQSAILIGKAGATIKQLRVKTRTNIKVVP 182
Query: 213 ----DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDH-------------- 254
D +CA+ D V + GE + V++AL +S + SP++
Sbjct: 183 KDAADPEHSCAMEFDNFV-LVGESEAVKRALFAVSTIMYKFSPKEDIPLDTTVPETPHSI 241
Query: 255 ---ESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIH---------LPMPPS-IPKF 301
+P P G +P D V + P G + D+H P+ S +P
Sbjct: 242 IIPSELPIYPPGGLYPASDPIVQPRSFPQLIGATTMQDLHGGYADTGNTWPLYSSPLPVV 301
Query: 302 HESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTED 361
G E L R+LC +++G +IGKGG I+ ++Q +G I+V ++ + ++
Sbjct: 302 SSLGA-----SQSEELIVRMLCPSDKIGQLIGKGGGTIKRMRQASGARIEVDDSKARHDE 356
Query: 362 RLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGG 421
LI I+ D S +AVL +Q +I D + V RLLV S IGC++G+ G
Sbjct: 357 CLITITATESTSDLKSVAVEAVLLLQEKIN----DEDDAPVSIRLLVPSKVIGCIIGRSG 412
Query: 422 SIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRD 481
+II E+RK + A I+I + PK A +N+E+V + GE + V++AL QI RLR ++
Sbjct: 413 AIINEIRKRTKADIQI-SRSNKPKYADDNDELVEVVGEVDCVRDALIQIVLRLREDVLKN 471
Query: 482 AFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNF---GPSFHKFDAVGGPPPPGSF 538
NR + L + LS P M S+ P+ +D G
Sbjct: 472 KDIDHNRHIGSESL--------YASSSVLSAPPMLSSIPATAPAL-AYDQRTGSGTGLGM 522
Query: 539 HPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRS 598
H H + + M D G M + PP + +VVP +
Sbjct: 523 HSSRSHYGYDSY--------SMED----NGYGSMSSYATNLYEGHRLPPLSTLEMVVPAN 570
Query: 599 LVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMS 658
V + G+ GA L IR+IS A + I++ K + V +ISGT E+ AA++LIQAF+M+
Sbjct: 571 AVGKVMGKGGANLANIRKISGATVEISESKSYRGDRVALISGTSEEKRAAENLIQAFIMA 630
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 162/370 (43%), Gaps = 56/370 (15%)
Query: 315 EILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDD 374
E++ +R+LC +E +G VIGK G +I S++QE+ +KV++ G + R+I I H +
Sbjct: 40 ELIAYRILCPNEVIGSVIGKNGKVINSIRQESRAKVKVVDPFPGAKHRVITIF--CHVKN 97
Query: 375 R--------------ISAPQDAVLRVQTRIARAI------PDNREQTVMTRLLVASNQIG 414
+ + A QDA+++V + I+ +I R+ ++LV S+Q
Sbjct: 98 KEEIEIEDEFDNEKPLCAAQDALIKVHSAISNSIETAGDSEKKRKNKDECQILVPSSQSA 157
Query: 415 CLLGKGGSIIAEMRKLSGAYIRILGKDQIP---KCASENEEVVLINGEFEAVQEALFQIT 471
L+GK G+ I ++R + I+++ KD CA E + VL+ GE EAV+ ALF ++
Sbjct: 158 ILIGKAGATIKQLRVKTRTNIKVVPKDAADPEHSCAMEFDNFVLV-GESEAVKRALFAVS 216
Query: 472 TRLRHHFFRDAFP-SINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVG 530
T + ++ P P P + S P + P G+Y P
Sbjct: 217 TIMYKFSPKEDIPLDTTVPETPHSIIIPSELPIY------PPGGLYPASDPIVQ------ 264
Query: 531 GPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRR 590
P SF P + M +H G + P P+ +G
Sbjct: 265 ----PRSF-PQLIGATTMQDLH--GGYADTGNTWPL-------YSSPLPVVSSLGASQSE 310
Query: 591 ---VPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHA 647
V ++ P + + G+ G +K++RQ S A+I + D K E +I I+ T +
Sbjct: 311 ELIVRMLCPSDKIGQLIGKGGGTIKRMRQASGARIEVDDSKARHDECLITITATESTSDL 370
Query: 648 AQSLIQAFVM 657
++A ++
Sbjct: 371 KSVAVEAVLL 380
>gi|293332893|ref|NP_001169297.1| uncharacterized protein LOC100383161 [Zea mays]
gi|224028485|gb|ACN33318.1| unknown [Zea mays]
Length = 664
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 151/550 (27%), Positives = 257/550 (46%), Gaps = 85/550 (15%)
Query: 154 SKVQKALLLVFERMVEVEPETEVAD-------QENTKSSKFVLRLLVLSTQVGCLLGKGG 206
S Q+ALL+V R++E + + D ++ K RL+V VGCLLGKGG
Sbjct: 147 SPAQEALLMVHRRILETDADDGDEDGEYGPRGKDARDRGKTTTRLIVPKQHVGCLLGKGG 206
Query: 207 CVIKQI--------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPR 252
+I+Q+ P C +S+EVVQ+ G+ + V+KA+ +I+ +L ++ R
Sbjct: 207 KIIEQMRMETKTHIRILSRGQHTPRCVSSSEEVVQVVGDGNCVKKAVAIITDRLKESLHR 266
Query: 253 DHESIPGNPTGPS-------------HPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIP 299
D G P +P + V S G P D ++ M P
Sbjct: 267 DRGPFRGRLNSPEPRISQEDEYLGGVQQMPAY-VESLGGP------DQIRNNISMEPPGY 319
Query: 300 KFHESG--VLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS 357
F +G V++ P E + FR+LC +++ ++ I+ L+ + G D+++ + S
Sbjct: 320 VFDSNGGKVIEHPDILYEDIIFRILCPNDKADSLVATRDGILEMLQTDVGVDVRLSDITS 379
Query: 358 GTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLL 417
+++R+++I+ PD + Q+AVL +QT I PD + + TRLLV +++I C
Sbjct: 380 DSDERVLIITSREGPDHELFPAQEAVLHIQTHIVDLGPD-MDNIITTRLLVPASEIACFD 438
Query: 418 GKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHH 477
G+ GS ++++++ + A ++IL ++ +P CA E++E++ I GE +A + AL Q+TT+LR
Sbjct: 439 GREGS-LSDIQRQTSANVQILPREDLPSCALESDELIQIVGEIKAARNALIQVTTKLRSF 497
Query: 478 FFRDAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGS 537
+R+ P + N +SP SP G Y G P G+
Sbjct: 498 LYRE-MPDPIQVGNINLHGAISPVAG-------SPRGPYQ------------GNDIPMGA 537
Query: 538 FHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPM-------GFPDFVGPPHRR 590
+H + H G G E G + F P R
Sbjct: 538 YHQASQLATSWHSKDSGG-----------SASGSFEQGSNINDDIRQSATKRFAVPLVTR 586
Query: 591 --VPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAA 648
+ +V+P S V + G+ L QI +IS A +T+ + + + V+ ISGTPEQ A
Sbjct: 587 STLEIVIPNSAVASLTMRAGSKLAQISEISGAAVTLAEDRSDILQKVVRISGTPEQASKA 646
Query: 649 QSLIQAFVMS 658
++L+Q F++S
Sbjct: 647 ENLLQGFILS 656
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 112/260 (43%), Gaps = 37/260 (14%)
Query: 304 SGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRL 363
S D S +FR+LC + + + ++ ++G + V +G R+
Sbjct: 72 SATADGGAGSTATTSFRILCPECKAYSF---SPGFVAKVRDDSGALVTVHPPFAGDYVRV 128
Query: 364 I-VISGPAHPDD----RISAPQDAVLRVQTRIARAI--------------PDNREQ-TVM 403
I + G D S Q+A+L V RI D R++
Sbjct: 129 IETVDGARREADGCPPMFSPAQEALLMVHRRILETDADDGDEDGEYGPRGKDARDRGKTT 188
Query: 404 TRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQ-IPKCASENEEVVLINGEFEA 462
TRL+V +GCLLGKGG II +MR + +IRIL + Q P+C S +EEVV + G+
Sbjct: 189 TRLIVPKQHVGCLLGKGGKIIEQMRMETKTHIRILSRGQHTPRCVSSSEEVVQVVGDGNC 248
Query: 463 VQEALFQITTRLRHHFFRDAFPSINRPLNP--------TFLDQVSPFPSFIGRRELSPPG 514
V++A+ IT RL+ RD P R +P +L V P+++ L P
Sbjct: 249 VKKAVAIITDRLKESLHRDRGPFRGRLNSPEPRISQEDEYLGGVQQMPAYV--ESLGGPD 306
Query: 515 MYSN---FGPSFHKFDAVGG 531
N P + FD+ GG
Sbjct: 307 QIRNNISMEPPGYVFDSNGG 326
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 89/213 (41%), Gaps = 69/213 (32%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
I+FR+LCP K D ++ ++ + D GV +R+ + S SDER+++I + +
Sbjct: 339 IIFRILCPNDKADSLVATRDGILEMLQTDVGVDVRLSDITSDSDERVLIITSREGP---- 394
Query: 106 ENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFE 165
+ E Q+A+L +
Sbjct: 395 --------------------------------------------DHELFPAQEAVLHIQT 410
Query: 166 RMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCV------------IKQID 213
+V++ P D +N ++ RLLV ++++ C G+ G + I +
Sbjct: 411 HIVDLGP-----DMDNIITT----RLLVPASEIACFDGREGSLSDIQRQTSANVQILPRE 461
Query: 214 KLPTCALASDEVVQITGEVDTVRKALKLISHQL 246
LP+CAL SDE++QI GE+ R AL ++ +L
Sbjct: 462 DLPSCALESDELIQIVGEIKAARNALIQVTTKL 494
>gi|255551350|ref|XP_002516721.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223544094|gb|EEF45619.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 537
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 167/497 (33%), Positives = 263/497 (52%), Gaps = 66/497 (13%)
Query: 15 DNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQD 74
+N + G + K E P ++R+LCP KI GVIGK G ++ + ++
Sbjct: 14 NNQFKRKGVTRKGKWNNSGREESSGNPLPVDTVYRILCPSRKIGGVIGKGGGIIKGLREE 73
Query: 75 TGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASVADESDNKKE 134
T I V + V GSDER+++I +S K I R+ N+ E+ ++ +E D
Sbjct: 74 TQAKITVADPVPGSDERVIIIYSSPEK----------ISRNHND-HEDLTMENEQD---- 118
Query: 135 DSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVL 194
+M+ Q ALL V +R+VE + + ++ ++ RLLV
Sbjct: 119 --------IMEPY------CAAQDALLKVHDRIVEEDLFGGMTSDDDNENGFVTARLLVP 164
Query: 195 STQVGCLLGKGGCVIKQI-------------DKLPTCALASDEVVQITGEVDTVRKALKL 241
+ VGCLLGK G VI+++ D LPTCA+++DE+VQI+ + D +KAL
Sbjct: 165 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADHLPTCAMSTDELVQISAKPDVAKKALYE 224
Query: 242 ISHQLLDNSPRDHE--SIPGNPTGPS-HP--LPDHSVSSQGAPYATGHRDVADIHLPMP- 295
+S LL +PR + S+P +G S HP P ++ G+P H I PMP
Sbjct: 225 VS-TLLHQNPRKDKPPSVPMPYSGQSFHPPGGPMKNLPPLGSPMWPHHNSSHSIP-PMPI 282
Query: 296 -----PSIPKFHESGVLDRPK-----PSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQE 345
F G D P+ PS E + ++LC ++GGVIGKGG+ ++ ++Q+
Sbjct: 283 MGRYGSQSSGFGPGGFDDVPRGHVAEPSAE-FSMKILCSAGKIGGVIGKGGSNVKVVQQD 341
Query: 346 TGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQ-TVMT 404
TG I V +A + +++R+I +S + S DA+L++Q + + D E+ T+ T
Sbjct: 342 TGASIHVEDASAESDERVIRVSASEALWNPRSQTIDAILQLQNKTS----DFSEKGTITT 397
Query: 405 RLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQ 464
RLLV S+++GC+LG+GG +I EMR+ + A IR+ KD+ PKCASE+EE+V I+G+F +
Sbjct: 398 RLLVPSSKVGCILGQGGQVINEMRRRTQADIRVYSKDEKPKCASEDEELVQISGKFGVAK 457
Query: 465 EALFQITTRLRHHFFRD 481
+AL +I +RLR RD
Sbjct: 458 DALAEIASRLRVRTLRD 474
>gi|218192926|gb|EEC75353.1| hypothetical protein OsI_11789 [Oryza sativa Indica Group]
Length = 478
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 164/497 (32%), Positives = 255/497 (51%), Gaps = 106/497 (21%)
Query: 74 DTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASVADESDNKK 133
DT IR+ E+VSG DER++ I +S + T
Sbjct: 4 DTQAKIRIGESVSGCDERVITIFSSSRETNT----------------------------- 34
Query: 134 EDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKS-SKFVLRLL 192
L+D +E + Q AL V E++ + ++ ++E+ + ++ +RLL
Sbjct: 35 ---------LVD---AEDKVCPAQDALFRVHEKL---SIDDDIGNEESDEGLAQVTVRLL 79
Query: 193 VLSTQVGCLLGKGGCVIKQI-------------DKLPTCALASDEVVQITGEVDTVRKAL 239
V S Q+GC++GKGG +I+ I + LP CA++ DE++QI+G+ VRKAL
Sbjct: 80 VPSDQIGCIIGKGGHIIQGIRSDTGAHIRVLSNENLPACAISGDELLQISGDSTVVRKAL 139
Query: 240 KLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAP----------YATGHRDVAD 289
+S +L DN R + + T P +P+ H SS AP Y DVA
Sbjct: 140 LQVSSRLHDNPSRSQHLLASSMTQP-YPVGSHLGSSSTAPVVGITPLISSYGGYKGDVAG 198
Query: 290 IHLPMPPSI--PKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETG 347
PSI P+ ES S + + RLLC VGGVIGKGG II+ ++QE+G
Sbjct: 199 DW----PSIYQPRREES--------SAKEFSLRLLCAASNVGGVIGKGGGIIKQIRQESG 246
Query: 348 CDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIA-RAIPDNREQTVMTRL 406
IKV ++ + +D +I +S +D +S +A + +Q R + + P++ + TRL
Sbjct: 247 AFIKV-DSSNTEDDCIITVSAKEFFEDPVSPTINAAVHLQPRCSEKTDPESAIPSYTTRL 305
Query: 407 LVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEA 466
LV++++IGCL+GKGGSII E+R+ S A IRIL K+ +PK A+E+EE+V I+G+ + V+ A
Sbjct: 306 LVSTSRIGCLIGKGGSIITEIRRTSRANIRILSKENVPKVAAEDEEMVQISGDLDVVRHA 365
Query: 467 LFQITTRLRHHFFR-----DAFPSI--NRPL------NPTFLDQVS-------PFPS-FI 505
L QITTRL+ +FF FP + PL P +L + + P+ S +
Sbjct: 366 LLQITTRLKANFFEREGALSGFPPVIPYHPLPVGVSEGPKYLGRDTKPLGHDYPYSSGYR 425
Query: 506 GRRELSPPGMYSNFGPS 522
G ++SP Y+++G S
Sbjct: 426 GSDDISPIDSYASYGSS 442
>gi|124359392|gb|ABN05856.1| KH, type 1 [Medicago truncatula]
Length = 564
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 130/390 (33%), Positives = 190/390 (48%), Gaps = 54/390 (13%)
Query: 226 VQITGEVDTVRKALKLISHQLLDNSPRD--------------HESIPGNPTGPSHPLPDH 271
+ I G V +V+KAL +S L D D HE++ G P +P
Sbjct: 1 MMIEGSVSSVKKALVAVSRNLQDRHHADRTKMTGQNSHEVIHHEALVGVPRETLMSVPRE 60
Query: 272 SVSSQGAPYATGH----RDVADIH----------LPMPPSIPKFHESGV------LDR-- 309
+ GAP T + D+H L + PS + +GV ++R
Sbjct: 61 TF--IGAPRETLTAVPCETLTDLHVDHLLQRRSALSILPSSSNSYATGVHSLSAEVNRVS 118
Query: 310 ---PKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVI 366
PK + +TF+++C ++R+GGVIGKGG IIR+L+ ETG + V +V+ EDRLI I
Sbjct: 119 SLEPKAHQQEITFKIICSNDRIGGVIGKGGNIIRALQSETGATVSVGPSVAECEDRLITI 178
Query: 367 SGPAHPDDRISAPQDAVLRVQTR-----IARAIPD--NREQTVMTRLLVASNQIGCLLGK 419
+ P+ R S Q A + V +R I + I N +V +L+V+SNQ+GCLLGK
Sbjct: 179 TASESPESRYSPAQKATVLVFSRSVEAGIEKGIDSGLNTGSSVTAQLVVSSNQVGCLLGK 238
Query: 420 GGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFF 479
GG I++EMRK +GA IRI+G D++ KCAS+N++VV I+GEF VQ+AL+ T RLR + F
Sbjct: 239 GGVIVSEMRKATGASIRIVGTDKVSKCASDNDQVVQISGEFSNVQDALYNATGRLRDNLF 298
Query: 480 RDAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFH 539
S + SP+ GR P G S+ + F + P G
Sbjct: 299 GGTLKSAGTRSLSSVQSDTSPY----GRLRDVPLGSQSSLRADTNAFVRLRDVPLVGQSS 354
Query: 540 PHDDHSAF--MHHIHRPGMPPHMPDMKPWG 567
D S + + + G D P+G
Sbjct: 355 LQADTSPYVRLRDVSLGGQSSLQSDTSPYG 384
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 97/217 (44%), Gaps = 62/217 (28%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
I F+++C +I GVIGK G ++ + +TG T+ V +V+ ++RL+ I AS++
Sbjct: 129 ITFKIICSNDRIGGVIGKGGNIIRALQSETGATVSVGPSVAECEDRLITITASESP---- 184
Query: 106 ENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFE 165
E S QKA +LVF
Sbjct: 185 --------------------------------------------ESRYSPAQKATVLVFS 200
Query: 166 RMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI------------- 212
R VE E + NT SS +L+V S QVGCLLGKGG ++ ++
Sbjct: 201 RSVEAGIEKGIDSGLNTGSS-VTAQLVVSSNQVGCLLGKGGVIVSEMRKATGASIRIVGT 259
Query: 213 DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDN 249
DK+ CA +D+VVQI+GE V+ AL + +L DN
Sbjct: 260 DKVSKCASDNDQVVQISGEFSNVQDALYNATGRLRDN 296
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 72/138 (52%), Gaps = 20/138 (14%)
Query: 537 SFHPHDDHSAFMHHIHRPG-----MPPHMPDMKP-------WGPQ----GLMEVGGPMGF 580
+F DH + + RP PP + M WG GL V G
Sbjct: 428 TFSQGIDHFSLGRNYDRPSSPGLWTPPRVTGMNSGSINEASWGSTSRKGGLELVSGSKSA 487
Query: 581 PDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISG 640
+ + +VVP + ++ GE+G+ L ++RQIS AK+ I +P+PG ++ I++SG
Sbjct: 488 I----VTNTTIEIVVPEDTLYLVYGENGSNLARLRQISGAKVVIHEPRPGTSDRTIVLSG 543
Query: 641 TPEQTHAAQSLIQAFVMS 658
+P++T AAQSL+QAF+++
Sbjct: 544 SPDETQAAQSLLQAFILN 561
>gi|147853553|emb|CAN81693.1| hypothetical protein VITISV_009249 [Vitis vinifera]
Length = 543
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 158/470 (33%), Positives = 233/470 (49%), Gaps = 93/470 (19%)
Query: 47 MFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSE 106
++R LCPV KI +IG+ G++ Q+ +T IR+ ET+ G +ER+V I +S
Sbjct: 44 VYRYLCPVRKIGSIIGRGGDIAKQLRSETKSNIRIGETMPGCEERVVTIYSSS------- 96
Query: 107 NLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFER 166
E N D+ G ++ S Q AL V +R
Sbjct: 97 ---------------------EETNPFGDT---GELV----------SPAQDALFRVHDR 122
Query: 167 MVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI-------------D 213
+V E AD+E ++ + +R+LV S Q+GC++GKGG VI+ I +
Sbjct: 123 IVAGELP---ADEEPEEAQQVTVRMLVPSDQIGCVIGKGGQVIQNIRSETRAQIRILKDE 179
Query: 214 KLPTCALASDEVVQ------------ITGEVDTVRKALKLIS-----------HQLLDNS 250
LP CAL+SDE++Q I G+ VRKAL ++ H LL +S
Sbjct: 180 HLPPCALSSDELLQAFGNVFWALTSQIIGDASVVRKALHQLASRLHENPSRSQHLLLSSS 239
Query: 251 PRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRP 310
P ++S G P+ P V+ Y D D H R
Sbjct: 240 PNMYQS-GGTFMTPNIDAPLVGVAPLMGSYGGYKGDTGDWS----------HSYYSARRD 288
Query: 311 KPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPA 370
+ S + + RL+C +GGVIGKGG II+ ++QE+G IKV + + +D +I IS
Sbjct: 289 ESSAKEFSLRLVCPTGNIGGVIGKGGGIIKQIRQESGASIKVDSSSAEGDDCIIFISAKE 348
Query: 371 HPDDRISAPQDAVLRVQTRIA-RAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRK 429
+D S DA LR+Q R + +A ++ + V TRLLV S++IGCL+GKGG+II+EMR
Sbjct: 349 FFEDP-SPTIDAALRLQPRCSEKAERESSDSVVTTRLLVPSSRIGCLIGKGGAIISEMRS 407
Query: 430 LSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFF 479
++ A IRIL K+ +PK ASE++E+V I GE AL Q+T RL+ + F
Sbjct: 408 VTRANIRILSKENLPKVASEDDEMVQITGELNVASNALLQVTLRLKANLF 457
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 102/187 (54%), Gaps = 24/187 (12%)
Query: 315 EILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDD 374
E +R LC ++G +IG+GG I + L+ ET +I++ E + G E+R++ I + +
Sbjct: 41 EDTVYRYLCPVRKIGSIIGRGGDIAKQLRSETKSNIRIGETMPGCEERVVTIYSSSEETN 100
Query: 375 -------RISAPQDAVLRVQTRI-ARAIPDNRE----QTVMTRLLVASNQIGCLLGKGGS 422
+S QDA+ RV RI A +P + E Q V R+LV S+QIGC++GKGG
Sbjct: 101 PFGDTGELVSPAQDALFRVHDRIVAGELPADEEPEEAQQVTVRMLVPSDQIGCVIGKGGQ 160
Query: 423 IIAEMRKLSGAYIRILGKDQIPKCASENEEVV------------LINGEFEAVQEALFQI 470
+I +R + A IRIL + +P CA ++E++ I G+ V++AL Q+
Sbjct: 161 VIQNIRSETRAQIRILKDEHLPPCALSSDELLQAFGNVFWALTSQIIGDASVVRKALHQL 220
Query: 471 TTRLRHH 477
+RL +
Sbjct: 221 ASRLHEN 227
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 118/274 (43%), Gaps = 79/274 (28%)
Query: 31 GDYSENQPS----KSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVS 86
GD+S + S +S R++CP I GVIGK G ++ QI Q++G +I+V+ + +
Sbjct: 276 GDWSHSYYSARRDESSAKEFSLRLVCPTGNIGGVIGKGGGIIKQIRQESGASIKVDSSSA 335
Query: 87 GSDERLVVIEASDNKKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDG 146
D+ ++ I A + ++ S ++A++ R + +++++ + DSV
Sbjct: 336 EGDDCIIFISAKEFFEDPSPTIDAAL-------RLQPRCSEKAERESSDSV--------- 379
Query: 147 LNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGG 206
RLLV S+++GCL+GKGG
Sbjct: 380 ----------------------------------------VTTRLLVPSSRIGCLIGKGG 399
Query: 207 CVIKQI-------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRD 253
+I ++ + LP A DE+VQITGE++ AL ++ +L N
Sbjct: 400 AIISEMRSVTRANIRILSKENLPKVASEDDEMVQITGELNVASNALLQVTLRLKANLFER 459
Query: 254 HESIPGN-PTGPSHPLPDHSVSSQGAPYATGHRD 286
+I PT P P+ D S G+ Y G RD
Sbjct: 460 EGAIAAIPPTLPYLPMSDM---SDGSKY--GSRD 488
>gi|15236863|ref|NP_193572.1| KH domain-containing protein [Arabidopsis thaliana]
gi|15214341|sp|P58223.1|Y4837_ARATH RecName: Full=KH domain-containing protein At4g18375
gi|22136632|gb|AAM91635.1| unknown protein [Arabidopsis thaliana]
gi|332658636|gb|AEE84036.1| KH domain-containing protein [Arabidopsis thaliana]
Length = 606
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 181/676 (26%), Positives = 294/676 (43%), Gaps = 169/676 (25%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
+++R+LCP+ + GVIGK G++++ I +T I+V + + G +R++ I S +K+
Sbjct: 36 VVYRILCPIDVVGGVIGKSGKVINAIRHNTKAKIKVFDQLHGCSQRVITIYCSVKEKQE- 94
Query: 106 ENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFE 165
E +SEN E A Q ALL V++
Sbjct: 95 ---EIGFTKSEN---EPLCCA------------------------------QDALLKVYD 118
Query: 166 RMVEVEPETEV---ADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI---------- 212
+V + E D+++ K RLLV +Q L+GK G IK+I
Sbjct: 119 AIVASDEENNTKTNVDRDDNKE----CRLLVPFSQSSSLIGKAGENIKRIRRRTRASVKV 174
Query: 213 ------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSH 266
D CA+ D VV I+GE ++V++AL +S + +PR E+IP + T
Sbjct: 175 VSKDVSDPSHVCAMEYDNVVVISGEPESVKQALFAVSAIMYKINPR--ENIPLDSTSQDV 232
Query: 267 PLPD--------HSVSSQGAPYAT------------------------GHRDVADIHLPM 294
P +SV Q Y+ G+ + A +P+
Sbjct: 233 PAASVIVPSDLSNSVYPQTGFYSNQDHILQQGAGVPSYFNALSVSDFQGYAETAANPVPV 292
Query: 295 -PPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVM 353
S+P H G R E L F++LC + VIGKGG+ I+ +++ +G I+V
Sbjct: 293 FASSLPVTHGFGGSSRS----EELVFKVLCPLCNIMRVIGKGGSTIKRIREASGSCIEVN 348
Query: 354 EAVS--GTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASN 411
++ + G ++ +I+++ PDD S +AVL +Q I D + V +LLV+S
Sbjct: 349 DSRTKCGDDECVIIVTATESPDDMKSMAVEAVLLLQ----EYINDEDAENVKMQLLVSSK 404
Query: 412 QIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQIT 471
IGC++GK GS+I E+RK + A I I + +++V ++GE +V++AL QI
Sbjct: 405 VIGCVIGKSGSVINEIRKRTNANICI--------SKGKKDDLVEVSGEVSSVRDALIQIV 456
Query: 472 TRLRHHFF--RDAFPSIN---RPLNPTFLDQVS----PFPSFIGRRELSPPGMYSNFGPS 522
RLR +D+ + R N +FL S PSF+ M S G
Sbjct: 457 LRLREDVLGDKDSVATRKPPARTDNCSFLSGSSNAGYTLPSFM-------SSMASTSG-- 507
Query: 523 FHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPD 582
FH + GSF D+ ++ GP +
Sbjct: 508 FHGY---------GSFPAGDN---------------------------VLGSTGPYSYGR 531
Query: 583 FVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTP 642
P + +++P + + G+ G L+ IR+IS A I I+ K + + ++SGT
Sbjct: 532 L--PSSSALEILIPAHAMSKVMGKGGGNLENIRRISGAMIEISASKTSHGDHIALLSGTL 589
Query: 643 EQTHAAQSLIQAFVMS 658
EQ A++L+QAFVMS
Sbjct: 590 EQMRCAENLVQAFVMS 605
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 155/362 (42%), Gaps = 64/362 (17%)
Query: 315 EILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAH--- 371
E++ +R+LC + VGGVIGK G +I +++ T IKV + + G R+I I
Sbjct: 34 ELVVYRILCPIDVVGGVIGKSGKVINAIRHNTKAKIKVFDQLHGCSQRVITIYCSVKEKQ 93
Query: 372 --------PDDRISAPQDAVLRVQTRIARAIPDNREQTVM-------TRLLVASNQIGCL 416
++ + QDA+L+V I + +N +T + RLLV +Q L
Sbjct: 94 EEIGFTKSENEPLCCAQDALLKVYDAIVASDEENNTKTNVDRDDNKECRLLVPFSQSSSL 153
Query: 417 LGKGGSIIAEMRKLSGAYIRILGKDQIP---KCASENEEVVLINGEFEAVQEALFQITTR 473
+GK G I +R+ + A ++++ KD CA E + VV+I+GE E+V++ALF ++
Sbjct: 154 IGKAGENIKRIRRRTRASVKVVSKDVSDPSHVCAMEYDNVVVISGEPESVKQALFAVSA- 212
Query: 474 LRHHFFRDAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPP 533
P N PL+ T D P S I +LS +Y
Sbjct: 213 ----IMYKINPRENIPLDSTSQD--VPAASVIVPSDLSNS-VY----------------- 248
Query: 534 PPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGG------------PMGFP 581
P F+ + DH + G+P + + QG E GF
Sbjct: 249 PQTGFYSNQDH--ILQ--QGAGVPSYFNALSVSDFQGYAETAANPVPVFASSLPVTHGFG 304
Query: 582 DFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDP--KPGATETVIIIS 639
V+ P + + G+ G+ +K+IR+ S + I + D K G E VII++
Sbjct: 305 GSSRSEELVFKVLCPLCNIMRVIGKGGSTIKRIREASGSCIEVNDSRTKCGDDECVIIVT 364
Query: 640 GT 641
T
Sbjct: 365 AT 366
>gi|13605589|gb|AAK32788.1|AF361620_1 AT5g46190/MCL19_25 [Arabidopsis thaliana]
Length = 640
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 144/482 (29%), Positives = 223/482 (46%), Gaps = 93/482 (19%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
+++R+LCP + VIGK G++++ I Q+T I+V + G ER++ I S ++K+
Sbjct: 44 VVYRILCPSGVMGSVIGKSGKVINLIRQETRARIKVVDPFPGCSERVITIFCSVSEKKDI 103
Query: 106 ENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFE 165
++E S L+ Q ALL V +
Sbjct: 104 VDIEYS----------------------------------ELDYSVPLCSAQAALLKVHD 129
Query: 166 RMVEVEPETEVADQENTKSSKFVLR---LLVLSTQVGCLLGKGGCVIKQI---------- 212
+V + ENTK + R LLV S+Q ++GK G +IK I
Sbjct: 130 AIVA----SLATAAENTKIDRDDFRECRLLVPSSQCSIVIGKSGSIIKNIRGRTRANVKV 185
Query: 213 ------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDH-------ESIPG 259
D TCA+ D +V I+GE ++V+KAL +S + SPR+ + +P
Sbjct: 186 VSKDVSDPSHTCAMDFDNIVMISGETESVKKALFAVSAIMYKVSPREQIPLDTTVQEVPA 245
Query: 260 NPTGPS----------HPLPDHSVSSQGA---------PYATGHRDVADIHLPMPPSIPK 300
+ PS +P D S+ GA P G + + ++P
Sbjct: 246 SIIIPSDLSIYPQAGLYPSQD-SIFQHGANVSSFIGTLPQGYGENAANPVPVFSASALPV 304
Query: 301 FHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSG-T 359
H G R E L +++C ++G VIGKGG I+ ++Q +G I+V ++ +
Sbjct: 305 VHGFGGSSRS----EKLAIKVICSSSKIGRVIGKGGLTIKGIRQASGSHIEVNDSRTNHD 360
Query: 360 EDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGK 419
+D +I ++ PDD S +AVL +Q +I D E V +LLV+S IGC++GK
Sbjct: 361 DDCVITVTATESPDDLKSMAVEAVLLLQEKIN----DEDEDKVKMQLLVSSKVIGCIIGK 416
Query: 420 GGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFF 479
GSII+E+RK + A I I + PKCA N+E+V I+GE V++AL QI RLR
Sbjct: 417 SGSIISEIRKRTKADIHISKGNNTPKCADPNDELVEISGEVSNVRDALIQIVLRLRDDVL 476
Query: 480 RD 481
RD
Sbjct: 477 RD 478
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 96/193 (49%), Gaps = 24/193 (12%)
Query: 316 ILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDR 375
++ +R+LC +G VIGK G +I ++QET IKV++ G +R+I I
Sbjct: 43 VVVYRILCPSGVMGSVIGKSGKVINLIRQETRARIKVVDPFPGCSERVITIFCSVSEKKD 102
Query: 376 I--------------SAPQDAVLRVQTRIARAIPDNREQTVM-------TRLLVASNQIG 414
I + Q A+L+V I ++ E T + RLLV S+Q
Sbjct: 103 IVDIEYSELDYSVPLCSAQAALLKVHDAIVASLATAAENTKIDRDDFRECRLLVPSSQCS 162
Query: 415 CLLGKGGSIIAEMRKLSGAYIRILGKDQIP---KCASENEEVVLINGEFEAVQEALFQIT 471
++GK GSII +R + A ++++ KD CA + + +V+I+GE E+V++ALF ++
Sbjct: 163 IVIGKSGSIIKNIRGRTRANVKVVSKDVSDPSHTCAMDFDNIVMISGETESVKKALFAVS 222
Query: 472 TRLRHHFFRDAFP 484
+ R+ P
Sbjct: 223 AIMYKVSPREQIP 235
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 88/224 (39%), Gaps = 72/224 (32%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
+ +V+C SKI VIGK G + I Q +G I V ++ + D+ V+
Sbjct: 317 LAIKVICSSSKIGRVIGKGGLTIKGIRQASGSHIEVNDSRTNHDDDCVI----------- 365
Query: 106 ENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFE 165
+ + D+ K +V +L + +N E E
Sbjct: 366 ----------------TVTATESPDDLKSMAVEAVLLLQEKINDEDE------------- 396
Query: 166 RMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDK----------- 214
K ++LLV S +GC++GK G +I +I K
Sbjct: 397 -------------------DKVKMQLLVSSKVIGCIIGKSGSIISEIRKRTKADIHISKG 437
Query: 215 --LPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHES 256
P CA +DE+V+I+GEV VR AL I +L D+ RD E+
Sbjct: 438 NNTPKCADPNDELVEISGEVSNVRDALIQIVLRLRDDVLRDRET 481
>gi|110224788|emb|CAL07994.1| putative nucleic acid binding protein [Platanus x acerifolia]
Length = 288
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 106/282 (37%), Positives = 158/282 (56%), Gaps = 33/282 (11%)
Query: 223 DEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIP----------GNPTGPSHPLPDHS 272
DE++QITGE V+KAL IS +L DN R + G+ TGP+ P
Sbjct: 1 DELLQITGEASVVKKALYQISTRLHDNPSRSQHLLTSAMSNAHQSGGSLTGPNAGAPIVG 60
Query: 273 VSSQGAPYATGHRDVA----DIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERV 328
++ PY D + P P R S + + RL+C +
Sbjct: 61 LAPLMGPYGGYKGDTGSEWPNAFYPAP-------------RDSVSAKEFSLRLVCPTGNI 107
Query: 329 GGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQT 388
GGVIGKGG++I+ ++QE+G IKV + + +D +I IS +D IS DA +R+Q
Sbjct: 108 GGVIGKGGSVIKQIRQESGAFIKVDSSAAEADDCIISISSKEFFEDPISPTIDAAVRLQP 167
Query: 389 RIA-RAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCA 447
+ + ++ ++ + T TRLLV +++IGCL+GKGGSII+EMRK++ A IRIL K+ +PK A
Sbjct: 168 KCSEKSDRESGDSTFTTRLLVPTSRIGCLIGKGGSIISEMRKVTKANIRILSKENLPKVA 227
Query: 448 SENEEVVLINGEFEAVQEALFQITTRLRHHFFR-----DAFP 484
SE++E+V I G+ + + AL Q+TTRL+ +FF AFP
Sbjct: 228 SEDDEMVQITGDLDVARNALIQVTTRLKTNFFEREGALSAFP 269
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 102/241 (42%), Gaps = 78/241 (32%)
Query: 31 GDYSENQPSKSFPG--------GIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVE 82
GD P+ +P R++CP I GVIGK G ++ QI Q++G I+V+
Sbjct: 73 GDTGSEWPNAFYPAPRDSVSAKEFSLRLVCPTGNIGGVIGKGGSVIKQIRQESGAFIKVD 132
Query: 83 ETVSGSDERLVVIEASDNKKE-TSENLEASIERSENNGREEASVADESDNKKEDSVNEGS 141
+ + +D+ ++ I + + ++ S ++A++ R + +++SD + DS
Sbjct: 133 SSAAEADDCIISISSKEFFEDPISPTIDAAV-------RLQPKCSEKSDRESGDST---- 181
Query: 142 VLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCL 201
F RLLV ++++GCL
Sbjct: 182 ---------------------------------------------FTTRLLVPTSRIGCL 196
Query: 202 LGKGGCVIKQIDK-------------LPTCALASDEVVQITGEVDTVRKALKLISHQLLD 248
+GKGG +I ++ K LP A DE+VQITG++D R AL ++ +L
Sbjct: 197 IGKGGSIISEMRKVTKANIRILSKENLPKVASEDDEMVQITGDLDVARNALIQVTTRLKT 256
Query: 249 N 249
N
Sbjct: 257 N 257
>gi|224127654|ref|XP_002329331.1| predicted protein [Populus trichocarpa]
gi|222870785|gb|EEF07916.1| predicted protein [Populus trichocarpa]
Length = 563
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 156/471 (33%), Positives = 249/471 (52%), Gaps = 71/471 (15%)
Query: 44 GGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNK-- 101
G ++R+LCP KI GVIGK G ++ + ++T I V ++V GSDER+++I +S +K
Sbjct: 42 GDTVYRILCPSRKIGGVIGKGGNIVKALREETQSKITVADSVQGSDERVIIIYSSSDKPP 101
Query: 102 --KETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKA 159
+ E L A NG++EA + Q A
Sbjct: 102 RKMDGDEGLPAG------NGQQEAF--------------------------EPHCAAQDA 129
Query: 160 LLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI------- 212
LL V +R+VE + +A ++ ++ RLLV + VGC+LGK G VI+++
Sbjct: 130 LLKVHDRIVEEDLFGGMASDDDNDNNVVTARLLVPNNMVGCVLGKRGDVIQRLRSETGAN 189
Query: 213 ------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHE--SIPGNPTGP 264
D LP+CA+ +DE+VQI+G+ ++AL IS LL +PR + S+P G
Sbjct: 190 IRVLPADHLPSCAMDTDELVQISGKPAVAKRALYEIS-ILLHQNPRKDKLPSVPMPYGGR 248
Query: 265 SHPLPDHSVSSQ---GAPYATGHRDVADIHLPMPPSI----PKFHESGVLDRP-----KP 312
+ P S+++ G P HR+ +P +F G P +P
Sbjct: 249 TFHPPSDSMANMLPPGNPMWP-HRNSTPHSMPWMGEYGNHPSEFGPGGFNGVPPGHGREP 307
Query: 313 SPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHP 372
S E + ++LC ++GGVIGKGG+ ++ ++QETG I V +A + +E+R I +S
Sbjct: 308 SAE-FSMKILCSTGKIGGVIGKGGSNVKIVQQETGASIHVEDASAESEERAIRVSAFEGL 366
Query: 373 DDRISAPQDAVLRVQTRIARAIPDNREQ-TVMTRLLVASNQIGCLLGKGGSIIAEMRKLS 431
+ S DA+L++Q + + D E+ ++TRLLV S+++GC+LG+GG +I EMR+
Sbjct: 367 WNPRSQTIDAILQLQDKTS----DFSEKGMIITRLLVPSSKVGCILGQGGQVINEMRRRL 422
Query: 432 GAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDA 482
A IR+ K+ PKCAS++EE+V I+G + ++AL +I +RLR RDA
Sbjct: 423 QADIRVYPKNDKPKCASDDEELVQISGNYGVAKDALAEIASRLRARTLRDA 473
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 109/384 (28%), Positives = 173/384 (45%), Gaps = 81/384 (21%)
Query: 318 TFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVI-SGPAHPDDRI 376
+R+LC ++GGVIGKGG I+++L++ET I V ++V G+++R+I+I S P ++
Sbjct: 45 VYRILCPSRKIGGVIGKGGNIVKALREETQSKITVADSVQGSDERVIIIYSSSDKPPRKM 104
Query: 377 -------------------SAPQDAVLRVQTRIAR--------AIPDNREQTVMTRLLVA 409
A QDA+L+V RI + DN V RLLV
Sbjct: 105 DGDEGLPAGNGQQEAFEPHCAAQDALLKVHDRIVEEDLFGGMASDDDNDNNVVTARLLVP 164
Query: 410 SNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQ 469
+N +GC+LGK G +I +R +GA IR+L D +P CA + +E+V I+G+ + AL++
Sbjct: 165 NNMVGCVLGKRGDVIQRLRSETGANIRVLPADHLPSCAMDTDELVQISGKPAVAKRALYE 224
Query: 470 ITTRLRHHFFRDAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAV 529
I+ L + +D PS+ P P G R PP D++
Sbjct: 225 ISILLHQNPRKDKLPSV-------------PMP--YGGRTFHPPS------------DSM 257
Query: 530 GGPPPPGS-FHPHDDHSAFMHHIHRPGMPPHMPDMKPWG--PQGLMEVGGPMGFPDFVGP 586
PPG+ P HR P MP M +G P GP GF + V P
Sbjct: 258 ANMLPPGNPMWP-----------HRNSTPHSMPWMGEYGNHPSEF----GPGGF-NGVPP 301
Query: 587 PHRRVP-------VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIIS 639
H R P ++ + + G+ G+ +K ++Q + A I + D + E I +S
Sbjct: 302 GHGREPSAEFSMKILCSTGKIGGVIGKGGSNVKIVQQETGASIHVEDASAESEERAIRVS 361
Query: 640 GTPEQTHAAQSLIQAFVMSETETT 663
+ I A + + +T+
Sbjct: 362 AFEGLWNPRSQTIDAILQLQDKTS 385
>gi|224098894|ref|XP_002311309.1| predicted protein [Populus trichocarpa]
gi|222851129|gb|EEE88676.1| predicted protein [Populus trichocarpa]
Length = 447
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 149/459 (32%), Positives = 225/459 (49%), Gaps = 84/459 (18%)
Query: 47 MFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSE 106
++R LCP+ KI +IGK GE+ Q+ D+ IR+ E + G DER+V I +S
Sbjct: 11 VYRYLCPLRKIGSIIGKGGEIAKQLRADSKSNIRISEAMPGYDERVVTIFSSS------- 63
Query: 107 NLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFER 166
E N ED+ + Q AL +V +R
Sbjct: 64 ---------------------EETNLFEDT-------------GEYVCPAQDALFMVHDR 89
Query: 167 MVEVEPETEVADQENTKSSKF------VLRLLVLSTQVGCLLGKGGCVIKQI-------- 212
++ E A E + +F +R+LV + Q+GC++GKGG VI+ I
Sbjct: 90 VI-AEDLNNAAAAEEEEEDRFGEVQQVTVRMLVPTDQIGCVIGKGGQVIQNIRSETRAQI 148
Query: 213 -----DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHP 267
+ LP AL++DE++ I GE VRKAL ++ +L HE NP+ H
Sbjct: 149 RITKDEHLPPLALSTDELLLIHGEPSVVRKALYQVATRL-------HE----NPSRSQHL 197
Query: 268 LPDHSVSSQGAPYATGHRDV-ADIHLPMPPSIPKFHESGVLD-----RPKPSPEILTFRL 321
L +SS Y +G V A+ P+ + S R + S + + RL
Sbjct: 198 L----LSSSANTYQSGGMFVTANAGAPLLGLYGNYKGSWSSSFYPDQRDEASAKDFSLRL 253
Query: 322 LCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQD 381
+C +GGVIGKGG II+ ++QE+ IKV + + D +I IS +D+ S +
Sbjct: 254 VCPIANIGGVIGKGGGIIKQIRQESRASIKVDSSGAEGNDCIIFISAKEFFEDQ-SPTMN 312
Query: 382 AVLRVQTRIA-RAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGK 440
A LR+Q R + + ++ + + TRLLV +QIGCL+GKGG+II+EMR L+ A IRI+ +
Sbjct: 313 AALRMQPRCSEKTEKESGDSVITTRLLVGRSQIGCLMGKGGAIISEMRNLTRANIRIISE 372
Query: 441 DQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFF 479
D +PK A E++E+V I G E AL Q+ RL+ + F
Sbjct: 373 DNLPKVAGEDDEMVQITGSLEVASNALLQVILRLKANIF 411
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 101/190 (53%), Gaps = 20/190 (10%)
Query: 308 DRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVIS 367
D+ + E +R LC ++G +IGKGG I + L+ ++ +I++ EA+ G ++R++ I
Sbjct: 1 DQHTVTNEDTVYRYLCPLRKIGSIIGKGGEIAKQLRADSKSNIRISEAMPGYDERVVTIF 60
Query: 368 GPAHPDD-------RISAPQDAVLRVQTRIARAIPDNRE-------------QTVMTRLL 407
+ + + QDA+ V R+ +N Q V R+L
Sbjct: 61 SSSEETNLFEDTGEYVCPAQDALFMVHDRVIAEDLNNAAAAEEEEEDRFGEVQQVTVRML 120
Query: 408 VASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEAL 467
V ++QIGC++GKGG +I +R + A IRI + +P A +E++LI+GE V++AL
Sbjct: 121 VPTDQIGCVIGKGGQVIQNIRSETRAQIRITKDEHLPPLALSTDELLLIHGEPSVVRKAL 180
Query: 468 FQITTRLRHH 477
+Q+ TRL +
Sbjct: 181 YQVATRLHEN 190
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 100/242 (41%), Gaps = 77/242 (31%)
Query: 29 LAGDYSENQPSKSFPG--------GIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIR 80
L G+Y + S +P R++CP++ I GVIGK G ++ QI Q++ +I+
Sbjct: 224 LYGNYKGSWSSSFYPDQRDEASAKDFSLRLVCPIANIGGVIGKGGGIIKQIRQESRASIK 283
Query: 81 VEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASVADESDNKKEDSVNEG 140
V+ + + ++ ++ I A + ++ S + A++ R + +++++ + DSV
Sbjct: 284 VDSSGAEGNDCIIFISAKEFFEDQSPTMNAAL-------RMQPRCSEKTEKESGDSV--- 333
Query: 141 SVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGC 200
RLLV +Q+GC
Sbjct: 334 ----------------------------------------------ITTRLLVGRSQIGC 347
Query: 201 LLGKGGCVIKQI-------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLL 247
L+GKGG +I ++ D LP A DE+VQITG ++ AL + +L
Sbjct: 348 LMGKGGAIISEMRNLTRANIRIISEDNLPKVAGEDDEMVQITGSLEVASNALLQVILRLK 407
Query: 248 DN 249
N
Sbjct: 408 AN 409
>gi|413953982|gb|AFW86631.1| hypothetical protein ZEAMMB73_253509 [Zea mays]
Length = 581
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/356 (30%), Positives = 193/356 (54%), Gaps = 30/356 (8%)
Query: 154 SKVQKALLLVFERMVEVEPETEVAD-------QENTKSSKFVLRLLVLSTQVGCLLGKGG 206
S Q+ALL+V R++E + + D +++ K RL+V VGCLLGKGG
Sbjct: 151 SPAQEALLMVHRRILETDADDGDEDGEYGPRGKDSRDRGKTTTRLIVPKMHVGCLLGKGG 210
Query: 207 CVIKQI--------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPR 252
+I+Q+ P C S+EVVQ+ G+ + V+KA+ +I+ +L ++ R
Sbjct: 211 KIIEQMRMETKTHIRILPRDQHTPRCVSLSEEVVQVVGDGNCVKKAVAIITDRLKESLHR 270
Query: 253 DHESIPGNPTGPSHPLP---DHSVSSQGAPY--ATGHRDVADIHLPMPPSIPKF--HESG 305
D G P + D+ SQ Y + G D + M P +F ++
Sbjct: 271 DRGPFRGRMNSPEPRISQEDDYLGVSQMPAYEESLGRSDQIRNNTSMEPPGYEFDSNDGK 330
Query: 306 VLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIV 365
V++ P + + FR+LC +++V ++ I+ L+ + G D+++ + ++G+++R+++
Sbjct: 331 VIEHPDILYDDIIFRILCPNDKVDNLVATNDGILEMLQADVGVDVRLSDIIAGSDERVVI 390
Query: 366 ISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIA 425
I+ PD + Q+AVL +QT I PD ++ + TRLLV S++I C G+ GS ++
Sbjct: 391 ITSREGPDHELFPAQEAVLHIQTHIVDLGPD-KDNIITTRLLVPSSEIACFDGREGS-LS 448
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRD 481
++++ + A ++IL K+ +P CA E++E++ I GE A + AL Q+TT+LR +R+
Sbjct: 449 DIQRQTSANVQILPKEDLPLCALESDELIQIVGEISAARNALIQVTTKLRSFLYRE 504
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 112/245 (45%), Gaps = 28/245 (11%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLI-VISGPAHPDD--- 374
FR+LC + + G + ++ ++G + V +G R+I + G D
Sbjct: 91 FRILCPECKAYGF---PPGFVAKVRDDSGALVTVHPPFAGDYVRVIETVDGARREADGRP 147
Query: 375 -RISAPQDAVLRVQTRIARAI--------------PDNREQ-TVMTRLLVASNQIGCLLG 418
S Q+A+L V RI D+R++ TRL+V +GCLLG
Sbjct: 148 PMFSPAQEALLMVHRRILETDADDGDEDGEYGPRGKDSRDRGKTTTRLIVPKMHVGCLLG 207
Query: 419 KGGSIIAEMRKLSGAYIRILGKDQ-IPKCASENEEVVLINGEFEAVQEALFQITTRLRHH 477
KGG II +MR + +IRIL +DQ P+C S +EEVV + G+ V++A+ IT RL+
Sbjct: 208 KGGKIIEQMRMETKTHIRILPRDQHTPRCVSLSEEVVQVVGDGNCVKKAVAIITDRLKES 267
Query: 478 FFRDAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGS 537
RD P R +P ++S ++G ++ P + G S + PP
Sbjct: 268 LHRDRGPFRGRMNSPE--PRISQEDDYLGVSQM--PAYEESLGRSDQIRNNTSMEPPGYE 323
Query: 538 FHPHD 542
F +D
Sbjct: 324 FDSND 328
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 90/213 (42%), Gaps = 69/213 (32%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
I+FR+LCP K+D ++ + ++ + D GV +R+ + ++GSDER+V+I + +
Sbjct: 342 IIFRILCPNDKVDNLVATNDGILEMLQADVGVDVRLSDIIAGSDERVVIITSRE------ 395
Query: 106 ENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFE 165
+ E Q+A+L +
Sbjct: 396 ------------------------------------------GPDHELFPAQEAVLHIQT 413
Query: 166 RMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCV------------IKQID 213
+V++ P+ K + RLLV S+++ C G+ G + I +
Sbjct: 414 HIVDLGPD---------KDNIITTRLLVPSSEIACFDGREGSLSDIQRQTSANVQILPKE 464
Query: 214 KLPTCALASDEVVQITGEVDTVRKALKLISHQL 246
LP CAL SDE++QI GE+ R AL ++ +L
Sbjct: 465 DLPLCALESDELIQIVGEISAARNALIQVTTKL 497
>gi|388500506|gb|AFK38319.1| unknown [Lotus japonicus]
Length = 437
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 136/463 (29%), Positives = 222/463 (47%), Gaps = 57/463 (12%)
Query: 223 DEVVQITGEVDTVRKALKLISHQLLDNSPRDHES-----------------IPGNPTGPS 265
D V ITGE ++V++AL +S + P++ S +P P G
Sbjct: 4 DNFVVITGESESVKRALFAVSSIMYKFGPKEDISLDTTVPEAPPSIIIPSEVPYYPHGGL 63
Query: 266 HPLPDHSVSSQGAPYATGHRDVADI--HLPMPPSIPKFHE-----SGVLDRPKPSPEILT 318
+P D + + P G ++ D+ + + + P + SG +D + E L
Sbjct: 64 YPSSDPIIPPRAVPQIMGGTNIQDVQGYADIGNTWPLYSSALPVVSGGVDASQS--EELI 121
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISA 378
R+LC ++G VIG+GG+ I+S++Q +G I+V ++ + ++ LI+I+ P D S
Sbjct: 122 IRMLCPSNKIGRVIGRGGSTIKSMRQASGTRIEVDDSKANHDECLIIITTTESPSDLKSM 181
Query: 379 PQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRIL 438
+AVL +Q +I+ D + V +LLV S IGC++GK GSII E+RK + A IRI
Sbjct: 182 AVEAVLLIQGKIS----DEDDTEVSIQLLVPSKVIGCIIGKSGSIINEIRKRTRADIRIS 237
Query: 439 GKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQV 498
D+ PKCA N+E+V + G + V++AL QI RLR R+ + NPT
Sbjct: 238 KGDK-PKCADVNDELVEVGGAIDCVRDALIQIILRLRDDVLRER----DTGHNPT----- 287
Query: 499 SPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPP 558
IG L G + P +V P + + + M + +
Sbjct: 288 ------IGGESLYSGGAAYSLPPMLPSVSSVAAPM---VYDQRAESATGMGMLSSSSLYG 338
Query: 559 HMPDMKPWGPQGLMEVGGPMGFP-DFVG--PPHRRVPVVVPRSLVPIIQGEDGACLKQIR 615
+ + W G +P G PP + +++P + V + G+ GA + IR
Sbjct: 339 YGSLSQMWESG----YGSISSYPTKLYGSLPPPSTLDILIPANAVGKVLGKGGANIANIR 394
Query: 616 QISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMS 658
+IS A I I+D + + + +ISGTPE+ AA++LIQAF+M+
Sbjct: 395 KISGATIEISDAR-ARGDRIALISGTPEEKRAAENLIQAFIMA 436
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 158/363 (43%), Gaps = 104/363 (28%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
++ R+LCP +KI VIG+ G + + Q +G I V+++ + DE L++I +++
Sbjct: 120 LIIRMLCPSNKIGRVIGRGGSTIKSMRQASGTRIEVDDSKANHDECLIIITTTESP---- 175
Query: 106 ENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFE 165
S+ ++ V+ LL+
Sbjct: 176 -------------------------------------------SDLKSMAVEAVLLI--- 189
Query: 166 RMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKL---------- 215
+ +++D+++T+ S ++LLV S +GC++GK G +I +I K
Sbjct: 190 -------QGKISDEDDTEVS---IQLLVPSKVIGCIIGKSGSIINEIRKRTRADIRISKG 239
Query: 216 --PTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPT---------GP 264
P CA +DE+V++ G +D VR AL I +L D+ R+ ++ NPT G
Sbjct: 240 DKPKCADVNDELVEVGGAIDCVRDALIQIILRLRDDVLRERDT-GHNPTIGGESLYSGGA 298
Query: 265 SHPLPDH--SVSSQGAPYATGHRDVADIHLPM--------PPSIPKFHESGV-------- 306
++ LP SVSS AP R + + M S+ + ESG
Sbjct: 299 AYSLPPMLPSVSSVAAPMVYDQRAESATGMGMLSSSSLYGYGSLSQMWESGYGSISSYPT 358
Query: 307 -LDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIV 365
L P P T +L VG V+GKGGA I ++++ +G I++ +A DR+ +
Sbjct: 359 KLYGSLPPPS--TLDILIPANAVGKVLGKGGANIANIRKISGATIEISDA-RARGDRIAL 415
Query: 366 ISG 368
ISG
Sbjct: 416 ISG 418
>gi|359386146|gb|AEV43362.1| poly C-binding protein [Citrus sinensis]
Length = 569
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 148/471 (31%), Positives = 242/471 (51%), Gaps = 78/471 (16%)
Query: 31 GDYSENQPSKSF----PGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVS 86
G++S + +SF P ++R+LCP KI GVIGK G ++ + ++T I V +T+
Sbjct: 28 GNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIP 87
Query: 87 GSDERLVVIEASDNKKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDG 146
GS+ER+++I +S K I +++N + A ++ KKE
Sbjct: 88 GSEERVIIIYSSPTK----------IAKTQNKDDDSA-----AETKKE------------ 120
Query: 147 LNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGG 206
S + Q ALL V +R++E + +A ++ ++S RLLV + VGCLLGK G
Sbjct: 121 --SMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRG 178
Query: 207 CVIKQI-------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRD 253
VI+++ D+LP CA+ +DE+VQI+G+ + ++AL +S L N +D
Sbjct: 179 DVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKD 238
Query: 254 H--ESIP-----GNPTGPSHPLPD-HSVSSQGAPYATGHRDVADIHLPMPPSI------P 299
S P N P P+ D H + + P R+ + +P P + P
Sbjct: 239 KPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPA----RNSSLHGMPSTPWMGGYGDQP 294
Query: 300 KFHESGVLDRPKP------SPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVM 353
SG ++ P S E + ++LC ++GGVIGKGG ++ L+QETG I V
Sbjct: 295 SRMGSGSINSCPPGQMGEVSAE-FSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE 353
Query: 354 EAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQI 413
+A + +++R+I S + S DA+L++Q + + + + T+ TRLLV S+++
Sbjct: 354 DAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEF---SEKGTITTRLLVPSSKV 410
Query: 414 GCLLGKGGSIIAEMRKLSGAYIRILG---KDQIPKCASENEEVVLINGEFE 461
GC+LG+GG +I EMR+ + A IR++G K Q P S +E +V I G E
Sbjct: 411 GCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGS-SECIVDIRGSSE 460
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/199 (36%), Positives = 111/199 (55%), Gaps = 27/199 (13%)
Query: 314 PEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVI-SGPA-- 370
P +R+LC ++GGVIGK G I++SL++ET I V + + G+E+R+I+I S P
Sbjct: 44 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 103
Query: 371 ----HPDDRISA------------PQDAVLRVQTRIAR--------AIPDNREQTVMTRL 406
+ DD +A QDA+L+V RI + DN T+ RL
Sbjct: 104 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARL 163
Query: 407 LVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEA 466
LV +N +GCLLGK G +I +R +GA IR+L D++P CA +E+V I+G+ + A
Sbjct: 164 LVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRA 223
Query: 467 LFQITTRLRHHFFRDAFPS 485
L++++T L + +D PS
Sbjct: 224 LYEVSTLLHQNPRKDKPPS 242
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 593 VVVPRSLVPIIQGEDGACLKQIRQ-------ISDAKITITDPKPGATETVIIISGTPEQT 645
++VP S V I G+ G + ++R+ + A++ + DP PG++E ++ I G+ E
Sbjct: 403 LLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHL 462
Query: 646 HAAQSLIQAFVMS 658
+A Q+F+ S
Sbjct: 463 ISAHGTYQSFMTS 475
>gi|42573788|ref|NP_974990.1| HEN4 isoform 2 [Arabidopsis thaliana]
gi|332010500|gb|AED97883.1| HEN4 isoform 2 [Arabidopsis thaliana]
Length = 824
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 136/446 (30%), Positives = 204/446 (45%), Gaps = 80/446 (17%)
Query: 244 HQLLDNSPRD-----HESIPGNPTG-PSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPS 297
H+ + PRD ES P + G P + ++ Q A Y D H +
Sbjct: 369 HRPFEMVPRDAMGMPFESFPRDAYGRPIETMTQETLRGQSADYLAHRYSTLDTHPHSFTT 428
Query: 298 IPKFHESGVLDRPKPSPEI----LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVM 353
+ + P E+ + F++LC E GGVIG GG ++R L ETG I V
Sbjct: 429 SASMANTATMKPPPSEVEVGNQDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVG 488
Query: 354 EAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRI----ARAIPDNREQTVMT-RLLV 408
+ E+RLI ++ +P+ + S Q A++ + +R+ I DN ++ +T RL+V
Sbjct: 489 NTLDDCEERLIAVTASENPECQSSPAQKAIMLIFSRLFELATNKILDNGPRSSITARLVV 548
Query: 409 ASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALF 468
++QIGC+LGKGG I++EMRK +GA I+IL +Q PKC SEN++VV I GEF V+EA+F
Sbjct: 549 PTSQIGCVLGKGGVIVSEMRKTTGAAIQILKVEQNPKCISENDQVVQITGEFPNVREAIF 608
Query: 469 QITTRLRHHFFRDAF-----PSINRPLNPTFLDQVSPFPSFIGRRE-LSPPGMYSNFGPS 522
IT+RLR F ++ S + F D+ S P IG + +S P S+ S
Sbjct: 609 HITSRLRDSVFSNSMKNSLAKSSSALTTERFYDRQSDNPLSIGSHQSVSNPATNSS---S 665
Query: 523 FHKFD----------------AVGGPPP-------PGSFHP-----HD-------DHSAF 547
H+ +VG P P F+P H+ DHS
Sbjct: 666 LHRRSEDSFLSGSHSSVNYSRSVGTDPYIRPEDPFPDRFNPSAGYSHNFGRRFTMDHSDN 725
Query: 548 MHHIHRP-----GMPPHMPDMKPWGPQGLMEVGGPMGFP---DFVGPPHRR-------VP 592
HH+ PP P P+GL + G + +G H+ V
Sbjct: 726 SHHLTEAPSRLWASPP------PAAPRGLSDASGGLSSARAGHVLGSGHKSAIVTNTTVE 779
Query: 593 VVVPRSLVPIIQGEDGACLKQIRQIS 618
+ VP + + + GE G L+Q+RQ+S
Sbjct: 780 IRVPANAMSFVYGEQGYNLEQLRQVS 805
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 99/198 (50%), Gaps = 26/198 (13%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI-- 376
FRLLC VG VIGK G +I+ L+Q TG I+V E SG+ DR+I I A R+
Sbjct: 49 FRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVKL 108
Query: 377 -------------------SAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLL 417
S Q A+++V +A + TV+ RLL S+ G ++
Sbjct: 109 GANNNGNAEGEKKEEEVEVSKAQGALIKVFELLA---AEADSDTVVCRLLTESSHAGAVI 165
Query: 418 GKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHH 477
GKGG ++ +RK +G I I + +P CA ++E+V + G AV++AL I+ L++
Sbjct: 166 GKGGQMVGSIRKETGCKISIR-IENLPICADTDDEMVEVEGNAIAVKKALVSISRCLQNC 224
Query: 478 FFRDAFPSI-NRPLNPTF 494
D + NRPL F
Sbjct: 225 QSIDKVRMVGNRPLEKEF 242
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 103/229 (44%), Gaps = 50/229 (21%)
Query: 44 GGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKE 103
G FR+LCP+S + VIGK G ++ Q+ Q TG IRVEE SGS +R++ I A
Sbjct: 45 GHAAFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQ----- 99
Query: 104 TSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLV 163
AD K + N G+ + E E SK Q AL+ V
Sbjct: 100 ----------------------ADSKSRVKLGANNNGNAEGEKKEEEVEVSKAQGALIKV 137
Query: 164 FERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKG-----------GCVIK-Q 211
FE ++ E +++ V RLL S+ G ++GKG GC I +
Sbjct: 138 FE-LLAAEADSDTV----------VCRLLTESSHAGAVIGKGGQMVGSIRKETGCKISIR 186
Query: 212 IDKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGN 260
I+ LP CA DE+V++ G V+KAL IS L + D + GN
Sbjct: 187 IENLPICADTDDEMVEVEGNAIAVKKALVSISRCLQNCQSIDKVRMVGN 235
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 64/217 (29%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
++F++LC GVIG G+++ + +TG I V T+ +ERL+ + AS+N
Sbjct: 452 VVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAVTASENP---- 507
Query: 106 ENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFE 165
E ++S QKA++L+F
Sbjct: 508 --------------------------------------------ECQSSPAQKAIMLIFS 523
Query: 166 RMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKL---------- 215
R+ E+ + +N S RL+V ++Q+GC+LGKGG ++ ++ K
Sbjct: 524 RLFELATNKIL---DNGPRSSITARLVVPTSQIGCVLGKGGVIVSEMRKTTGAAIQILKV 580
Query: 216 ---PTCALASDEVVQITGEVDTVRKALKLISHQLLDN 249
P C +D+VVQITGE VR+A+ I+ +L D+
Sbjct: 581 EQNPKCISENDQVVQITGEFPNVREAIFHITSRLRDS 617
>gi|145347410|ref|XP_001418160.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578389|gb|ABO96453.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 651
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 167/666 (25%), Positives = 273/666 (40%), Gaps = 153/666 (22%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
+ +R+LCP ++I VIGK+G ++ +TG ++V T G+DER++++ + D+
Sbjct: 58 VRYRLLCPTTRIGRVIGKEGRVIKATRAETGARVKVAPTTRGADERVILVASGDD----- 112
Query: 106 ENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFE 165
L G + E T+ + AL +F+
Sbjct: 113 -------------------------------------LTVGEDGEGMTT-AEVALFRIFD 134
Query: 166 RMVEVEPETEV-----------ADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI-- 212
+ E T + +S + RLLV QVG L+GKGG VI I
Sbjct: 135 TITGEEGVTAARGGEGEGEGEASGGSTRGASTPICRLLVPRVQVGSLIGKGGTVISAIRA 194
Query: 213 -----------DKLPTCALASDEVVQITG--------------EVDTVRKALKLISHQLL 247
+ LP CA DE++QIT + +V+ AL++I+ L
Sbjct: 195 SSGATVRVMPANMLPACASQGDELLQITAPSRDADGAERDQKLSMASVKNALRMIAKHL- 253
Query: 248 DNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVL 307
R++ S P + ++ AP+A A M + + +GV
Sbjct: 254 ----REYPSKNAATESNRSPFEAFMIGNKTAPHAGVESPGAKNGGHMST---RMNLNGVY 306
Query: 308 DRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVIS 367
P +TFRLLC + G VIG+ G +I+ ++ +TG +KV E V+G E+R+I +S
Sbjct: 307 ---VPGGTEITFRLLCPVSKTGSVIGRNGEVIQQIRSQTGAKVKVCEQVNGAEERIICVS 363
Query: 368 GPAHPDDRIS---APQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSII 424
DD ++ A Q A+ RV I + + E + RLLV ++QIGCL+GKGGSII
Sbjct: 364 ---SSDDGLAPMLAAQVALFRVYRCIVESAGN--EIPLPFRLLVQTSQIGCLIGKGGSII 418
Query: 425 AEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFP 484
++R +GA +R+L + +P CA+++E + + +A + ++ RLR + A
Sbjct: 419 KQIRNETGATVRVLPSEALPSCANDDELLEIGQWPADACALGIRIVSGRLRGNIRHKAAE 478
Query: 485 SINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDH 544
+ + Q F + + EL P GM A G P
Sbjct: 479 RLTSTADAQN-TQTMGFDATWQQAELIPYGMTQT---------AYGSP-----------E 517
Query: 545 SAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPP---HRRVPVVVPRSLVP 601
+ M GG P + P V + + +
Sbjct: 518 TVMMSKTK--------------------STGGARAPPVEIAPGVSVVNSVQMAISSQHIG 557
Query: 602 IIQGEDGACLKQIRQISDAKITITDPKPGATET---------VIIISGTPEQTHAAQSLI 652
+ G G + RQ+S A+I + G+ T ++ ISG+ EQ +AQ +I
Sbjct: 558 SVLGRGGCNISLARQVSGARIKLYPGAAGSRRTADRSVDSDRLLEISGSSEQVASAQDII 617
Query: 653 QAFVMS 658
Q F+ S
Sbjct: 618 QRFIAS 623
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 44/60 (73%), Gaps = 2/60 (3%)
Query: 43 PGG--IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDN 100
PGG I FR+LCPVSK VIG++GE++ QI TG ++V E V+G++ER++ + +SD+
Sbjct: 308 PGGTEITFRLLCPVSKTGSVIGRNGEVIQQIRSQTGAKVKVCEQVNGAEERIICVSSSDD 367
>gi|224112243|ref|XP_002316129.1| predicted protein [Populus trichocarpa]
gi|222865169|gb|EEF02300.1| predicted protein [Populus trichocarpa]
Length = 553
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 148/473 (31%), Positives = 231/473 (48%), Gaps = 89/473 (18%)
Query: 47 MFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSE 106
++R LCP+ KI +IGK GE+ Q+ D+ IR+ E + G DER+V I +S
Sbjct: 43 VYRYLCPLRKIGSIIGKGGEIAKQLRADSKSNIRISEAMPGYDERIVTIYSSS------- 95
Query: 107 NLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFER 166
EE ++ E+ + Q AL +V +R
Sbjct: 96 --------------EETNLFGETG--------------------EYVCPAQDALFMVHDR 121
Query: 167 MVEVEPETEVADQENTKSS-----KFVLRLLVLSTQVGCLLGKGGCVIKQI--------- 212
++ + A++E + + + +R+LV + Q+GC++GKGG VI+ I
Sbjct: 122 VIAEDLNNAAAEEEEGEDNFGEVQQVTVRMLVPADQIGCVIGKGGQVIQNIRSETCAQIR 181
Query: 213 ----DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPL 268
D LP AL+ DE++ I GE VRKAL ++ +L HE NP+ H +
Sbjct: 182 ITKDDHLPPLALSIDELLLIHGEPSAVRKALYQVATRL-------HE----NPSRSQHLI 230
Query: 269 PDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLD-RPKPSPEILTFRLLCHDER 327
S + G + T + + L + S D R + S + + RL+C
Sbjct: 231 LSSSANVHGGVFVTANAGAPVLGL-YGNYKGGWSSSFYPDQRDESSTKEFSLRLVCPTAN 289
Query: 328 VGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQ 387
+GGVIGKGG II+ ++QE+ IKV + + +D +I IS +D+ S +A LR+Q
Sbjct: 290 IGGVIGKGGGIIKQIRQESRASIKVDSSGAEGDDCIIFISAKEFFEDQ-SPTMNAALRLQ 348
Query: 388 TRIA-RAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKC 446
R + + ++ + + TRLLV +QIGCL+GKGG+II+EMR + A IRI+ +D +PK
Sbjct: 349 PRCSDKTEKESGDSVITTRLLVGRSQIGCLMGKGGAIISEMRNQTRANIRIISEDNLPKV 408
Query: 447 ASENEEVVLIN----------GEFEAVQEALFQITTRLRHHFF-RD----AFP 484
A E++E+V +N G E AL Q+ RL+ + F RD AFP
Sbjct: 409 AVEDDEMVQVNVYNFNSVQITGSLEVASNALLQVILRLKANLFGRDGALTAFP 461
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 101/187 (54%), Gaps = 20/187 (10%)
Query: 308 DRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVIS 367
D+ + E +R LC ++G +IGKGG I + L+ ++ +I++ EA+ G ++R++ I
Sbjct: 33 DQNTITNEDTVYRYLCPLRKIGSIIGKGGEIAKQLRADSKSNIRISEAMPGYDERIVTIY 92
Query: 368 GPAHPDD-------RISAPQDAVLRVQTRIARAIPDNRE-------------QTVMTRLL 407
+ + + QDA+ V R+ +N Q V R+L
Sbjct: 93 SSSEETNLFGETGEYVCPAQDALFMVHDRVIAEDLNNAAAEEEEGEDNFGEVQQVTVRML 152
Query: 408 VASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEAL 467
V ++QIGC++GKGG +I +R + A IRI D +P A +E++LI+GE AV++AL
Sbjct: 153 VPADQIGCVIGKGGQVIQNIRSETCAQIRITKDDHLPPLALSIDELLLIHGEPSAVRKAL 212
Query: 468 FQITTRL 474
+Q+ TRL
Sbjct: 213 YQVATRL 219
Score = 39.3 bits (90), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 99/252 (39%), Gaps = 87/252 (34%)
Query: 29 LAGDYSENQPSKSFPGG--------IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIR 80
L G+Y S +P R++CP + I GVIGK G ++ QI Q++ +I+
Sbjct: 254 LYGNYKGGWSSSFYPDQRDESSTKEFSLRLVCPTANIGGVIGKGGGIIKQIRQESRASIK 313
Query: 81 VEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASVADESDNKKEDSVNEG 140
V+ + + D+ ++ I A + ++ S + A++ R + +D+++ + DSV
Sbjct: 314 VDSSGAEGDDCIIFISAKEFFEDQSPTMNAAL-------RLQPRCSDKTEKESGDSV--- 363
Query: 141 SVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGC 200
RLLV +Q+GC
Sbjct: 364 ----------------------------------------------ITTRLLVGRSQIGC 377
Query: 201 LLGKGGCVIKQI-------------DKLPTCALASDEV----------VQITGEVDTVRK 237
L+GKGG +I ++ D LP A+ DE+ VQITG ++
Sbjct: 378 LMGKGGAIISEMRNQTRANIRIISEDNLPKVAVEDDEMVQVNVYNFNSVQITGSLEVASN 437
Query: 238 ALKLISHQLLDN 249
AL + +L N
Sbjct: 438 ALLQVILRLKAN 449
>gi|28261405|gb|AAO37829.1| HEN4 isoform 2 [Arabidopsis thaliana]
Length = 836
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 136/446 (30%), Positives = 204/446 (45%), Gaps = 80/446 (17%)
Query: 244 HQLLDNSPRD-----HESIPGNPTG-PSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPS 297
H+ + PRD ES P + G P + ++ Q A Y D H +
Sbjct: 381 HRPFEMVPRDAMGMPFESFPRDAYGRPIETMTQETLRGQSADYLAHRYSTLDTHPHSFTT 440
Query: 298 IPKFHESGVLDRPKPSPEI----LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVM 353
+ + P E+ + F++LC E GGVIG GG ++R L ETG I V
Sbjct: 441 SASMANTATMKPPPSEVEVGNQDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVG 500
Query: 354 EAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRI----ARAIPDNREQTVMT-RLLV 408
A+ E+RLI ++ +P+ + S Q A++ + +R+ I DN ++ +T RL+V
Sbjct: 501 NALDDCEERLIAVTASENPECQSSPAQKAIMLIFSRLFELATNKILDNGPRSSITARLVV 560
Query: 409 ASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALF 468
++QIGC+LGKGG I++EMRK +GA I+IL +Q PKC SEN++VV I EF V+EA+F
Sbjct: 561 PTSQIGCVLGKGGVIVSEMRKTTGAAIQILKVEQNPKCISENDQVVQITEEFPNVREAIF 620
Query: 469 QITTRLRHHFFRDAF-----PSINRPLNPTFLDQVSPFPSFIGRRE-LSPPGMYSNFGPS 522
IT+RLR F ++ S + F D+ S P IG + +S P S+ S
Sbjct: 621 HITSRLRDSVFSNSMKNSLAKSSSALTTERFYDRQSDNPLSIGSHQSVSNPATNSS---S 677
Query: 523 FHKFD----------------AVGGPPP-------PGSFHP-----HD-------DHSAF 547
H+ +VG P P F+P H+ DHS
Sbjct: 678 LHRRSEDSFLSGSHSSVNYSRSVGTDPYIRPEDPFPDRFNPSAGYSHNFGRRFTMDHSDN 737
Query: 548 MHHIHRP-----GMPPHMPDMKPWGPQGLMEVGGPMGFP---DFVGPPHRR-------VP 592
HH+ PP P P+GL + G + +G H+ V
Sbjct: 738 SHHLTEAPSRLWASPP------PAAPRGLSDASGGLSSARAGHVLGSGHKSAIVTNTTVE 791
Query: 593 VVVPRSLVPIIQGEDGACLKQIRQIS 618
+ VP + + + GE G L+Q+RQ+S
Sbjct: 792 IRVPANAMSFVYGEQGYNLEQLRQVS 817
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 99/198 (50%), Gaps = 26/198 (13%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI-- 376
FRLLC VG VIGK G +I+ L+Q TG I+V E SG+ DR+I I A R+
Sbjct: 49 FRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVKL 108
Query: 377 -------------------SAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLL 417
S Q A+++V +A + TV+ RLL S+ G ++
Sbjct: 109 GANNNGNAEGEKKEEEVEVSKAQGALIKVFELLA---AEADSDTVVCRLLTESSHAGAVI 165
Query: 418 GKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHH 477
GKGG ++ +RK +G I I + +P CA ++E+V + G AV++AL I+ L++
Sbjct: 166 GKGGQMVGSIRKETGCKISIR-IENLPICADTDDEMVEVEGNAIAVKKALVSISRCLQNC 224
Query: 478 FFRDAFPSI-NRPLNPTF 494
D + NRPL F
Sbjct: 225 QSIDKVRMVGNRPLEKEF 242
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 103/229 (44%), Gaps = 50/229 (21%)
Query: 44 GGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKE 103
G FR+LCP+S + VIGK G ++ Q+ Q TG IRVEE SGS +R++ I A
Sbjct: 45 GHAAFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQ----- 99
Query: 104 TSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLV 163
AD K + N G+ + E E SK Q AL+ V
Sbjct: 100 ----------------------ADSKSRVKLGANNNGNAEGEKKEEEVEVSKAQGALIKV 137
Query: 164 FERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKG-----------GCVIK-Q 211
FE ++ E +++ V RLL S+ G ++GKG GC I +
Sbjct: 138 FE-LLAAEADSDTV----------VCRLLTESSHAGAVIGKGGQMVGSIRKETGCKISIR 186
Query: 212 IDKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGN 260
I+ LP CA DE+V++ G V+KAL IS L + D + GN
Sbjct: 187 IENLPICADTDDEMVEVEGNAIAVKKALVSISRCLQNCQSIDKVRMVGN 235
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 95/217 (43%), Gaps = 64/217 (29%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
++F++LC GVIG G+++ + +TG I V + +ERL+ + AS+N
Sbjct: 464 VVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNALDDCEERLIAVTASENP---- 519
Query: 106 ENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFE 165
E ++S QKA++L+F
Sbjct: 520 --------------------------------------------ECQSSPAQKAIMLIFS 535
Query: 166 RMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKL---------- 215
R+ E+ + +N S RL+V ++Q+GC+LGKGG ++ ++ K
Sbjct: 536 RLFELATNKIL---DNGPRSSITARLVVPTSQIGCVLGKGGVIVSEMRKTTGAAIQILKV 592
Query: 216 ---PTCALASDEVVQITGEVDTVRKALKLISHQLLDN 249
P C +D+VVQIT E VR+A+ I+ +L D+
Sbjct: 593 EQNPKCISENDQVVQITEEFPNVREAIFHITSRLRDS 629
>gi|147818880|emb|CAN73780.1| hypothetical protein VITISV_042181 [Vitis vinifera]
Length = 637
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 139/481 (28%), Positives = 218/481 (45%), Gaps = 96/481 (19%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
I++R+LCP I VIGK G++++ I QDT I+V + G+ +R++ I +KE
Sbjct: 37 IVYRILCPDGVIGSVIGKSGKVINSIRQDTRAKIKVVDPFPGAKDRVITIYCYVKEKEEV 96
Query: 106 ENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFE 165
E + N ++ Q ALL V
Sbjct: 97 EVDDE------------------------------------FNDKQPLCPAQDALLKVHA 120
Query: 166 RMVEVEPETEVADQENTKSSKFV---LRLLVLSTQVGCLLGKGGCVIKQI---------- 212
+V VA EN+ K ++LV S+Q ++GK G IK++
Sbjct: 121 AIVNA-----VASLENSDKKKKDKEECQILVPSSQSANVIGKAGATIKRLRSKTRANIKI 175
Query: 213 ------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDH------------ 254
D +CA+ D V I G+ + V+KAL IS + +PR+
Sbjct: 176 TAKDSTDPSHSCAMEFDNFVLIAGDSEAVKKALFAISAIMYKFTPREEIPLDTTVPEAPP 235
Query: 255 -----ESIPGNPTGPSHPLPDHSVSSQGAP---YAT------GHRDVADIHLPMPPSIPK 300
+P P G +P D VS++ P AT G+ D+ ++P
Sbjct: 236 SIIIPSDVPIYPAGGFYPSADSIVSARSVPPVLAATHVPELQGYSDMGSTWPVYSSNLPV 295
Query: 301 FHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTE 360
G E L R+LC +++G VIG+GG+ I+S+++ +G ++V + + +
Sbjct: 296 VSGYGA-----SRSEELIIRVLCPFDKIGRVIGRGGSSIKSVREASGAHVEVDDTKADRD 350
Query: 361 DRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKG 420
+ LI ++ DD S +AVL +Q +I D + TV RLLV S IGC++GK
Sbjct: 351 ECLITVTSTESVDDLKSMAVEAVLLLQAKIN----DEDDDTVAIRLLVPSKIIGCIIGKS 406
Query: 421 GSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFR 480
GSII E+RK + A +RI K + PKCA N+E++ + GE +V++AL QI RLR +
Sbjct: 407 GSIINEIRKRTRADVRI-SKSERPKCADANDELIEVVGEVGSVRDALVQIVLRLRDDALK 465
Query: 481 D 481
D
Sbjct: 466 D 466
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 100/385 (25%), Positives = 166/385 (43%), Gaps = 60/385 (15%)
Query: 311 KPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVI---- 366
K S E++ +R+LC D +G VIGK G +I S++Q+T IKV++ G +DR+I I
Sbjct: 31 KGSDELIVYRILCPDGVIGSVIGKSGKVINSIRQDTRAKIKVVDPFPGAKDRVITIYCYV 90
Query: 367 ------SGPAHPDDR--ISAPQDAVLRVQTRIARAIPD------NREQTVMTRLLVASNQ 412
+D+ + QDA+L+V I A+ ++ ++LV S+Q
Sbjct: 91 KEKEEVEVDDEFNDKQPLCPAQDALLKVHAAIVNAVASLENSDKKKKDKEECQILVPSSQ 150
Query: 413 IGCLLGKGGSIIAEMRKLSGAYIRILGKDQIP---KCASENEEVVLINGEFEAVQEALFQ 469
++GK G+ I +R + A I+I KD CA E + VLI G+ EAV++ALF
Sbjct: 151 SANVIGKAGATIKRLRSKTRANIKITAKDSTDPSHSCAMEFDNFVLIAGDSEAVKKALFA 210
Query: 470 ITTRLRHHFFRDAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAV 529
I+ + R+ P LD P E P + + P +
Sbjct: 211 ISAIMYKFTPREEIP----------LDTTVP--------EAPPSIIIPSDVPIY------ 246
Query: 530 GGPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHR 589
P G F+P D + H+P+++ + G P G
Sbjct: 247 ----PAGGFYPSADSIVSARSVPPVLAATHVPELQGYSDMGSTWPVYSSNLPVVSGYGAS 302
Query: 590 RVPVVVPRSLVPI-----IQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPE- 643
R ++ R L P + G G+ +K +R+ S A + + D K E +I ++ T
Sbjct: 303 RSEELIIRVLCPFDKIGRVIGRGGSSIKSVREASGAHVEVDDTKADRDECLITVTSTESV 362
Query: 644 ---QTHAAQS--LIQAFVMSETETT 663
++ A ++ L+QA + E + T
Sbjct: 363 DDLKSMAVEAVLLLQAKINDEDDDT 387
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 104/241 (43%), Gaps = 77/241 (31%)
Query: 33 YSENQPSKSFPGG-----IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSG 87
YS N P S G ++ RVLCP KI VIG+ G + + + +G + V++T +
Sbjct: 289 YSSNLPVVSGYGASRSEELIIRVLCPFDKIGRVIGRGGSSIKSVREASGAHVEVDDTKAD 348
Query: 88 SDERLVVIEASDNKKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGL 147
DE L+ + ++++ +D L
Sbjct: 349 RDECLITVTSTES-------------------------------------------VDDL 365
Query: 148 NSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGC 207
S V+ LLL + ++ D+++ +RLLV S +GC++GK G
Sbjct: 366 KS----MAVEAVLLL----------QAKINDEDD---DTVAIRLLVPSKIIGCIIGKSGS 408
Query: 208 VIKQIDKL------------PTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHE 255
+I +I K P CA A+DE++++ GEV +VR AL I +L D++ +D +
Sbjct: 409 IINEIRKRTRADVRISKSERPKCADANDELIEVVGEVGSVRDALVQIVLRLRDDALKDRD 468
Query: 256 S 256
+
Sbjct: 469 T 469
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 44/66 (66%)
Query: 593 VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLI 652
+V+P + V + G+ GA + IR+IS A I I+D K + V +ISGTPEQ A++LI
Sbjct: 571 MVIPANAVGKVMGKGGANIANIRKISGAVIEISDSKSSRGDRVALISGTPEQKRTAENLI 630
Query: 653 QAFVMS 658
QAF+M+
Sbjct: 631 QAFIMA 636
>gi|225443912|ref|XP_002278367.1| PREDICTED: KH domain-containing protein At4g18375 [Vitis vinifera]
Length = 623
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 139/481 (28%), Positives = 218/481 (45%), Gaps = 96/481 (19%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
I++R+LCP I VIGK G++++ I QDT I+V + G+ +R++ I +KE
Sbjct: 37 IVYRILCPDGVIGSVIGKSGKVINSIRQDTRAKIKVVDPFPGAKDRVITIYCYVKEKEEV 96
Query: 106 ENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFE 165
E + N ++ Q ALL V
Sbjct: 97 EVDDE------------------------------------FNDKQPLCPAQDALLKVHA 120
Query: 166 RMVEVEPETEVADQENTKSSKFV---LRLLVLSTQVGCLLGKGGCVIKQI---------- 212
+V VA EN+ K ++LV S+Q ++GK G IK++
Sbjct: 121 AIVNA-----VASLENSDKKKKDKEECQILVPSSQSANVIGKAGATIKRLRSKTRANIKI 175
Query: 213 ------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDH------------ 254
D +CA+ D V I G+ + V+KAL IS + +PR+
Sbjct: 176 TAKDSTDPSHSCAMEFDNFVLIAGDSEAVKKALFAISAIMYKFTPREEIPLDTTVPEAPP 235
Query: 255 -----ESIPGNPTGPSHPLPDHSVSSQGAP---YAT------GHRDVADIHLPMPPSIPK 300
+P P G +P D VS++ P AT G+ D+ ++P
Sbjct: 236 SIIIPSDVPIYPAGGFYPSADSIVSARSVPPVLAATHVPELQGYSDMGSTWPVYSSNLPV 295
Query: 301 FHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTE 360
G E L R+LC +++G VIG+GG+ I+S+++ +G ++V + + +
Sbjct: 296 VSGYGA-----SRSEELIIRVLCPFDKIGRVIGRGGSSIKSVREASGAHVEVDDTKADRD 350
Query: 361 DRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKG 420
+ LI ++ DD S +AVL +Q +I D + TV RLLV S IGC++GK
Sbjct: 351 ECLITVTSTESVDDLKSMAVEAVLLLQAKIN----DEDDDTVAIRLLVPSKIIGCIIGKS 406
Query: 421 GSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFR 480
GSII E+RK + A +RI K + PKCA N+E++ + GE +V++AL QI RLR +
Sbjct: 407 GSIINEIRKRTRADVRI-SKSERPKCADANDELIEVVGEVGSVRDALVQIVLRLRDDALK 465
Query: 481 D 481
D
Sbjct: 466 D 466
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 100/385 (25%), Positives = 166/385 (43%), Gaps = 60/385 (15%)
Query: 311 KPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVI---- 366
K S E++ +R+LC D +G VIGK G +I S++Q+T IKV++ G +DR+I I
Sbjct: 31 KGSDELIVYRILCPDGVIGSVIGKSGKVINSIRQDTRAKIKVVDPFPGAKDRVITIYCYV 90
Query: 367 ------SGPAHPDDR--ISAPQDAVLRVQTRIARAIPD------NREQTVMTRLLVASNQ 412
+D+ + QDA+L+V I A+ ++ ++LV S+Q
Sbjct: 91 KEKEEVEVDDEFNDKQPLCPAQDALLKVHAAIVNAVASLENSDKKKKDKEECQILVPSSQ 150
Query: 413 IGCLLGKGGSIIAEMRKLSGAYIRILGKDQIP---KCASENEEVVLINGEFEAVQEALFQ 469
++GK G+ I +R + A I+I KD CA E + VLI G+ EAV++ALF
Sbjct: 151 SANVIGKAGATIKRLRSKTRANIKITAKDSTDPSHSCAMEFDNFVLIAGDSEAVKKALFA 210
Query: 470 ITTRLRHHFFRDAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAV 529
I+ + R+ P LD P E P + + P +
Sbjct: 211 ISAIMYKFTPREEIP----------LDTTVP--------EAPPSIIIPSDVPIY------ 246
Query: 530 GGPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHR 589
P G F+P D + H+P+++ + G P G
Sbjct: 247 ----PAGGFYPSADSIVSARSVPPVLAATHVPELQGYSDMGSTWPVYSSNLPVVSGYGAS 302
Query: 590 RVPVVVPRSLVPI-----IQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPE- 643
R ++ R L P + G G+ +K +R+ S A + + D K E +I ++ T
Sbjct: 303 RSEELIIRVLCPFDKIGRVIGRGGSSIKSVREASGAHVEVDDTKADRDECLITVTSTESV 362
Query: 644 ---QTHAAQS--LIQAFVMSETETT 663
++ A ++ L+QA + E + T
Sbjct: 363 DDLKSMAVEAVLLLQAKINDEDDDT 387
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 94/389 (24%), Positives = 158/389 (40%), Gaps = 126/389 (32%)
Query: 33 YSENQPSKSFPGG-----IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSG 87
YS N P S G ++ RVLCP KI VIG+ G + + + +G + V++T +
Sbjct: 289 YSSNLPVVSGYGASRSEELIIRVLCPFDKIGRVIGRGGSSIKSVREASGAHVEVDDTKAD 348
Query: 88 SDERLVVIEASDNKKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGL 147
DE L+ + ++++ +D L
Sbjct: 349 RDECLITVTSTES-------------------------------------------VDDL 365
Query: 148 NSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGC 207
S V+ LLL + ++ D+++ +RLLV S +GC++GK G
Sbjct: 366 KS----MAVEAVLLL----------QAKINDEDD---DTVAIRLLVPSKIIGCIIGKSGS 408
Query: 208 VIKQIDKL------------PTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHE 255
+I +I K P CA A+DE++++ GEV +VR AL I +L D++ +D +
Sbjct: 409 IINEIRKRTRADVRISKSERPKCADANDELIEVVGEVGSVRDALVQIVLRLRDDALKDRD 468
Query: 256 SIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHE------------ 303
TG + S+ S GA + V+ + PP P ++
Sbjct: 469 ------TGHNTSAGTDSLYSGGAGLS-----VSSVLPSAPPVAPLSYDQRAETGSGLGLL 517
Query: 304 ------------------------SGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAII 339
S L P+P TF ++ VG V+GKGGA I
Sbjct: 518 SSSSLYGYGSLSVGENAYGSMSSYSSKLYGGLPTPS--TFDMVIPANAVGKVMGKGGANI 575
Query: 340 RSLKQETGCDIKVMEAVSGTEDRLIVISG 368
++++ +G I++ ++ S DR+ +ISG
Sbjct: 576 ANIRKISGAVIEISDSKSSRGDRVALISG 604
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 44/66 (66%)
Query: 593 VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLI 652
+V+P + V + G+ GA + IR+IS A I I+D K + V +ISGTPEQ A++LI
Sbjct: 557 MVIPANAVGKVMGKGGANIANIRKISGAVIEISDSKSSRGDRVALISGTPEQKRTAENLI 616
Query: 653 QAFVMS 658
QAF+M+
Sbjct: 617 QAFIMA 622
>gi|9759415|dbj|BAB09870.1| unnamed protein product [Arabidopsis thaliana]
Length = 833
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 137/455 (30%), Positives = 204/455 (44%), Gaps = 89/455 (19%)
Query: 244 HQLLDNSPRD-----HESIPGNPTG-PSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPS 297
H+ + PRD ES P + G P + ++ Q A Y D H +
Sbjct: 369 HRPFEMVPRDAMGMPFESFPRDAYGRPIETMTQETLRGQSADYLAHRYSTLDTHPHSFTT 428
Query: 298 IPKFHESGVLDRPKPSPEI----LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVM 353
+ + P E+ + F++LC E GGVIG GG ++R L ETG I V
Sbjct: 429 SASMANTATMKPPPSEVEVGNQDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVG 488
Query: 354 EAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRI----ARAIPDNREQTVMT-RLLV 408
+ E+RLI ++ +P+ + S Q A++ + +R+ I DN ++ +T RL+V
Sbjct: 489 NTLDDCEERLIAVTASENPECQSSPAQKAIMLIFSRLFELATNKILDNGPRSSITARLVV 548
Query: 409 ASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALF 468
++QIGC+LGKGG I++EMRK +GA I+IL +Q PKC SEN++VV I GEF V+EA+F
Sbjct: 549 PTSQIGCVLGKGGVIVSEMRKTTGAAIQILKVEQNPKCISENDQVVQITGEFPNVREAIF 608
Query: 469 QITTRLRHHFFRDAF-----PSINRPLNPTFLDQVSPFPSFIGRRE-LSPPGMYSNFGPS 522
IT+RLR F ++ S + F D+ S P IG + +S P S+ S
Sbjct: 609 HITSRLRDSVFSNSMKNSLAKSSSALTTERFYDRQSDNPLSIGSHQSVSNPATNSS---S 665
Query: 523 FHKFD----------------AVGGPPP-------PGSFHP-----HD-------DHSAF 547
H+ +VG P P F+P H+ DHS
Sbjct: 666 LHRRSEDSFLSGSHSSVNYSRSVGTDPYIRPEDPFPDRFNPSAGYSHNFGRRFTMDHSDN 725
Query: 548 MHHIHRP-----GMPPHMPDMKPWGPQGLMEVGGPMGFP---DFVGPPHRR--------- 590
HH+ PP P P+GL + G + +G H R
Sbjct: 726 SHHLTEAPSRLWASPP------PAAPRGLSDASGGLSSARAGHVLGSLHARLVFSSGHKS 779
Query: 591 -------VPVVVPRSLVPIIQGEDGACLKQIRQIS 618
V + VP + + + GE G L+Q+RQ+S
Sbjct: 780 AIVTNTTVEIRVPANAMSFVYGEQGYNLEQLRQVS 814
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 99/198 (50%), Gaps = 26/198 (13%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI-- 376
FRLLC VG VIGK G +I+ L+Q TG I+V E SG+ DR+I I A R+
Sbjct: 49 FRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVKL 108
Query: 377 -------------------SAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLL 417
S Q A+++V +A + TV+ RLL S+ G ++
Sbjct: 109 GANNNGNAEGEKKEEEVEVSKAQGALIKVFELLA---AEADSDTVVCRLLTESSHAGAVI 165
Query: 418 GKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHH 477
GKGG ++ +RK +G I I + +P CA ++E+V + G AV++AL I+ L++
Sbjct: 166 GKGGQMVGSIRKETGCKISIR-IENLPICADTDDEMVEVEGNAIAVKKALVSISRCLQNC 224
Query: 478 FFRDAFPSI-NRPLNPTF 494
D + NRPL F
Sbjct: 225 QSIDKVRMVGNRPLEKEF 242
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 103/229 (44%), Gaps = 50/229 (21%)
Query: 44 GGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKE 103
G FR+LCP+S + VIGK G ++ Q+ Q TG IRVEE SGS +R++ I A
Sbjct: 45 GHAAFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQ----- 99
Query: 104 TSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLV 163
AD K + N G+ + E E SK Q AL+ V
Sbjct: 100 ----------------------ADSKSRVKLGANNNGNAEGEKKEEEVEVSKAQGALIKV 137
Query: 164 FERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKG-----------GCVIK-Q 211
FE ++ E +++ V RLL S+ G ++GKG GC I +
Sbjct: 138 FE-LLAAEADSDTV----------VCRLLTESSHAGAVIGKGGQMVGSIRKETGCKISIR 186
Query: 212 IDKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGN 260
I+ LP CA DE+V++ G V+KAL IS L + D + GN
Sbjct: 187 IENLPICADTDDEMVEVEGNAIAVKKALVSISRCLQNCQSIDKVRMVGN 235
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 64/217 (29%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
++F++LC GVIG G+++ + +TG I V T+ +ERL+ + AS+N
Sbjct: 452 VVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAVTASENP---- 507
Query: 106 ENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFE 165
E ++S QKA++L+F
Sbjct: 508 --------------------------------------------ECQSSPAQKAIMLIFS 523
Query: 166 RMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKL---------- 215
R+ E+ + +N S RL+V ++Q+GC+LGKGG ++ ++ K
Sbjct: 524 RLFELATNKIL---DNGPRSSITARLVVPTSQIGCVLGKGGVIVSEMRKTTGAAIQILKV 580
Query: 216 ---PTCALASDEVVQITGEVDTVRKALKLISHQLLDN 249
P C +D+VVQITGE VR+A+ I+ +L D+
Sbjct: 581 EQNPKCISENDQVVQITGEFPNVREAIFHITSRLRDS 617
>gi|297806983|ref|XP_002871375.1| hypothetical protein ARALYDRAFT_325507 [Arabidopsis lyrata subsp.
lyrata]
gi|297317212|gb|EFH47634.1| hypothetical protein ARALYDRAFT_325507 [Arabidopsis lyrata subsp.
lyrata]
Length = 525
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 140/485 (28%), Positives = 230/485 (47%), Gaps = 70/485 (14%)
Query: 27 QKLAGDYSENQPSKSFP-GGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETV 85
+K + P +S P G ++FR+L VS++ VIGKDG ++ Q+ + T I VE+
Sbjct: 4 KKFGAQSTARVPRQSPPEGYVLFRILGHVSQVGDVIGKDGRVIRQLKESTNSQIWVEKAP 63
Query: 86 SGSDERLVVIEASDNKKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMD 145
S R++ I A + + + + + + N+K++ V E
Sbjct: 64 LDSLYRVITIIA---------------DVGSTSRVKLGVIVNNASNRKKEEVQE------ 102
Query: 146 GLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKG 205
E E S+ Q AL+ VFE + + SS RLL+ + V ++GKG
Sbjct: 103 ---QEVEVSRAQGALIRVFEAL----------NVRFGTSSTVSSRLLMEACHVVTVIGKG 149
Query: 206 GCVIKQIDK------------LPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRD 253
G +++ I K LP+CA D +V+I G V V+K L IS +L
Sbjct: 150 GELMEMIRKETGCNVEICQYNLPSCADPDDVMVKIEGNVFAVKKVLVSISSRLQACQSIF 209
Query: 254 HESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADI------HLPMPPSIPKFHESGVL 307
+ + GNP H + + V + A Y + DI H + P + H + L
Sbjct: 210 KKKMVGNP----HNMQTNVVPRE-ALYRASNVFQGDISVSRLKHRELDP-LESLHRN--L 261
Query: 308 DRPKPSPE----ILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRL 363
+P+ E + ++LC ER+G VIG G A IR L+ ETG I + ++ L
Sbjct: 262 SQPRKDSEDNKQQVVLKILCSKERIGRVIGNGRATIRDLQSETGAFITLGSNRLDCDEGL 321
Query: 364 IVISGPAHPDDRISAPQDAVLRVQTRI-----ARAIPDNREQTVMTRLLVASNQIGCLLG 418
I+ P+ + S Q A++ V +++ A+ + ++ RL+V SNQI CL+G
Sbjct: 322 FTITASEDPNAKNSPSQRALVLVFSKMYENTTAKVLDSGLTSSITARLVVRSNQINCLMG 381
Query: 419 KGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHF 478
+ G I + +++ +GA+I +L +Q PKC SEN ++V I+G F V+EA+ Q+T+ LR
Sbjct: 382 EEGHIKSTIQQRTGAFITVLNVEQNPKCVSENNQIVQISGAFPNVKEAINQVTSMLREDL 441
Query: 479 FRDAF 483
+F
Sbjct: 442 INQSF 446
>gi|297821485|ref|XP_002878625.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297324464|gb|EFH54884.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 633
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 178/666 (26%), Positives = 281/666 (42%), Gaps = 107/666 (16%)
Query: 42 FPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNK 101
P RV+C S I G+IG +G ++S++ ++TG I E V+GSD +V I S
Sbjct: 21 LPDETAIRVVCHASVIGGIIGSNGYVVSKLRRETGTKIHCESPVNGSDHWVVFIVGS--- 77
Query: 102 KETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALL 161
T+ N + V D S + ED V + S Q AL+
Sbjct: 78 --TAVNKSVLLTDR---------VGDFSGGEHEDWVT------------CDVSAAQTALI 114
Query: 162 LVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKL------ 215
V ER V + + + + +L Q+G +LG GG ++ + +
Sbjct: 115 RVLERSWVVLAAKDGGGVVDGEDEEAYCGILADRNQIGAVLGLGGKNVEWMRRSSGAMIR 174
Query: 216 ----PTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRD-----------HESIPGN 260
P C +DE++QITG+V V+KAL ++S + DN P + S GN
Sbjct: 175 VLPPPICGTNTDELIQITGDVLAVKKALVMVSTCIQDNPPVNGYPQPLCIKAYESSTDGN 234
Query: 261 PTGP-SHPLPD-HSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILT 318
P S P+ S + A+ +R HLP V D + +
Sbjct: 235 SEDPHSEFFPNLRSSVPNASDSASSNR-----HLP-----------AVYDEGNGTERKVV 278
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISA 378
F+++ GG+IGK G IIR+L+ ETG I + + + +R++ IS + + R S
Sbjct: 279 FKIIFTSVVAGGIIGKQGTIIRALQNETGASISIGAPLKVSGERVVTISARENLESRYSH 338
Query: 379 PQDAVLRVQTRIARAIPDNREQ----------TVMTRLLVASNQIGCLLGKGG--SIIAE 426
Q+A+ V AR++ + E+ V T+LLV S L+G G +IIA
Sbjct: 339 AQNALALV---FARSVEIDVEKGLRPGLHNGAVVKTKLLVPSQFANSLVGNGNREAIIA- 394
Query: 427 MRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFF-RDAFPS 485
+GA + I +QI + SENE V+ I GE+ VQ+AL ++++LR + +
Sbjct: 395 ----TGADVHIPVDNQILEWISENEVVIEIKGEYGHVQKALTHVSSKLRENLLPKKVLGE 450
Query: 486 IN-RPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAV--GGPPPPGSFHPHD 542
+ R NP S + ++ S G + F V G + H
Sbjct: 451 MRARVSNPYESAGTSQIYNLKQSQQNSSRGDSLSVSDGEQNFKMVRSGAEVMKLNSVMHT 510
Query: 543 DHSAFMHHIHRPGMPPHM--PDMKPWGPQGLMEVGGPMGFPDFVGPPHRR---------- 590
+ + + +P + D+ Q M G D P RR
Sbjct: 511 EVLKEVDELKGFTLPQSLLEDDLTQEMKQLQMSRNG-----DVSSLPQRRGKGVYVRKIT 565
Query: 591 VPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQS 650
+ + V + + + G DG + +RQIS A + + DP G TV+IISG PEQT A S
Sbjct: 566 LELTVEKDALGSLYGRDGTGVDNLRQISGAGVDVKDP-TGIEATVLIISGNPEQTRTAMS 624
Query: 651 LIQAFV 656
LI++ +
Sbjct: 625 LIESIL 630
>gi|255562910|ref|XP_002522460.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223538345|gb|EEF39952.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 559
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 143/470 (30%), Positives = 226/470 (48%), Gaps = 83/470 (17%)
Query: 47 MFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSE 106
++R LCP+ KI +IG+ GE+ Q+ ++ IR+ E ++G +ER+V I + N +E+
Sbjct: 51 VYRYLCPLRKIGSIIGRGGEIAKQLRSESKSNIRISEAMAGFEERIVTIYS--NSEES-- 106
Query: 107 NLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFER 166
NL +S + Q AL +V +R
Sbjct: 107 NLFG-------------------------------------DSGEFVCPAQDALFMVHDR 129
Query: 167 MVEVEPETEVADQE-----------NTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI--- 212
++ + + E +K +R+LV + Q+GC++GKGG VI+ I
Sbjct: 130 IIAEDLNNSNNNNEEEDDEEEEEFGESKEQVVTVRMLVPADQIGCVIGKGGQVIQSIRSE 189
Query: 213 ----------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPT 262
+ LP AL+SDE++ I GE VRKAL ++ +L HE+ +
Sbjct: 190 TGAQIRILKDEHLPPLALSSDELLLIIGEPAVVRKALYQVATRL-------HENPSRSQH 242
Query: 263 GPSHPLPDHSVSSQGAPYAT--GHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFR 320
+ S G + T + ++ + S R + S + + R
Sbjct: 243 LLLSSSSTNMYQSGGGMFVTPTAGASLMGLYGSYKGGWSSSYYSD--QRDEGSSKEFSLR 300
Query: 321 LLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQ 380
L+C +GGVIGKGG II+ ++QE+ IKV + + +D +I IS +D+ SA
Sbjct: 301 LVCPIGNIGGVIGKGGGIIKQIRQESRASIKVDSSAAEGDDCIIFISAKEFFEDQ-SATL 359
Query: 381 DAVLRVQTRIARAIP-DNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILG 439
A LR+Q R + D+ + + TRLLV +QIGCL+GKGG+II+EMR ++ A IRIL
Sbjct: 360 TAALRLQPRCSEKTERDSGDSVITTRLLVPRSQIGCLMGKGGAIISEMRNVTRASIRILA 419
Query: 440 KDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFF-RD----AFP 484
+D +PK ASE++E+V I G + AL + RL+ + F RD AFP
Sbjct: 420 EDNLPKVASEDDEMVQITGSHDVASNALLHVVLRLKANLFGRDGALTAFP 469
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 102/186 (54%), Gaps = 26/186 (13%)
Query: 315 EILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDD 374
E +R LC ++G +IG+GG I + L+ E+ +I++ EA++G E+R++ I + +
Sbjct: 48 EDTVYRYLCPLRKIGSIIGRGGEIAKQLRSESKSNIRISEAMAGFEERIVTIYSNSEESN 107
Query: 375 R-------ISAPQDAVLRVQTRI-------------------ARAIPDNREQTVMTRLLV 408
+ QDA+ V RI +++EQ V R+LV
Sbjct: 108 LFGDSGEFVCPAQDALFMVHDRIIAEDLNNSNNNNEEEDDEEEEEFGESKEQVVTVRMLV 167
Query: 409 ASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALF 468
++QIGC++GKGG +I +R +GA IRIL + +P A ++E++LI GE V++AL+
Sbjct: 168 PADQIGCVIGKGGQVIQSIRSETGAQIRILKDEHLPPLALSSDELLLIIGEPAVVRKALY 227
Query: 469 QITTRL 474
Q+ TRL
Sbjct: 228 QVATRL 233
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 95/237 (40%), Gaps = 73/237 (30%)
Query: 26 SQKLAGDYSENQPSKSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETV 85
S D + SK F R++CP+ I GVIGK G ++ QI Q++ +I+V+ +
Sbjct: 281 SSSYYSDQRDEGSSKEFS----LRLVCPIGNIGGVIGKGGGIIKQIRQESRASIKVDSSA 336
Query: 86 SGSDERLVVIEASDNKKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMD 145
+ D+ ++ I A + ++ S L A++ R + +++++ DSV
Sbjct: 337 AEGDDCIIFISAKEFFEDQSATLTAAL-------RLQPRCSEKTERDSGDSV-------- 381
Query: 146 GLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKG 205
RLLV +Q+GCL+GKG
Sbjct: 382 -----------------------------------------ITTRLLVPRSQIGCLMGKG 400
Query: 206 GCVIKQI-------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDN 249
G +I ++ D LP A DE+VQITG D AL + +L N
Sbjct: 401 GAIISEMRNVTRASIRILAEDNLPKVASEDDEMVQITGSHDVASNALLHVVLRLKAN 457
>gi|449525363|ref|XP_004169687.1| PREDICTED: KH domain-containing protein At4g18375-like, partial
[Cucumis sativus]
Length = 531
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 144/518 (27%), Positives = 226/518 (43%), Gaps = 92/518 (17%)
Query: 5 LTPSKRPHDDDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIMFRVLCPVSKIDGVIGKD 64
+ KRP+ ++ NG K K ++ S +++R+LCP I VIGK
Sbjct: 1 MVSGKRPYGQRDY---NGDNKGYKRRITEQDDWVSDEL---VVYRILCPDEVIGSVIGKS 54
Query: 65 GEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEAS 124
G++++ I Q+T I+V + G+ +R++ I KE E
Sbjct: 55 GKVINSIRQETRAKIKVVDPFPGAKDRVITIFCFVKDKEDVE------------------ 96
Query: 125 VADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKS 184
V DE N + Q ALL V + D + +
Sbjct: 97 VDDE------------------FNDRQTLCAAQDALLKVHAAIANAL--ASAGDLDRKQR 136
Query: 185 SKFVLRLLVLSTQVGCLLGKGGCVIKQI----------------DKLPTCALASDEVVQI 228
K ++L+ S+Q ++GK G IK++ D + +CA+ D I
Sbjct: 137 DKEQCQILIPSSQSANVIGKAGSTIKKLRSKTRTSIKISPKDATDPIHSCAMDFDNFAVI 196
Query: 229 TGEVDTVRKALKLISHQLLDNSPRDH-----------------ESIPGNPTGPSHPLPDH 271
GE + VR+AL IS + PR+ +P G +P D
Sbjct: 197 AGEPEGVRRALFAISSIMYKFPPREEIPLDTNVNEAPPNIIIPSDVPLYSAGGLYPSADP 256
Query: 272 SVSSQGAPYATGHRDVADIH--------LPMPPSIPKFHESGVLDRPKPSPEILTFRLLC 323
+ + P G + V D+H P+ S G+ P PS E L R+LC
Sbjct: 257 ILPPRSIPPMLGAQHVQDLHDYPESGNAWPLYSSSLPVVPGGISGHP-PSEE-LVVRVLC 314
Query: 324 HDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAV 383
+ +G VIGKGG I+S++Q +G ++V + ++ +I IS DD S + V
Sbjct: 315 PFDNIGRVIGKGGGTIKSIRQASGARVEVDDTKRDCDECIITISSFESLDDLKSMAVETV 374
Query: 384 LRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQI 443
L +Q +I D+ TV+ RLL+ S IGC++GK GSII E+RK + A IRI D++
Sbjct: 375 LLLQEKIN----DDEGGTVIMRLLIPSKVIGCIIGKSGSIINEIRKSTRADIRISKGDKL 430
Query: 444 PKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRD 481
KCAS ++E+V + G+ V++AL QI RLR ++
Sbjct: 431 -KCASSSDELVEVTGKVGCVRDALVQIVLRLRDDALKE 467
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 104/352 (29%), Positives = 154/352 (43%), Gaps = 50/352 (14%)
Query: 313 SPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVI------ 366
S E++ +R+LC DE +G VIGK G +I S++QET IKV++ G +DR+I I
Sbjct: 32 SDELVVYRILCPDEVIGSVIGKSGKVINSIRQETRAKIKVVDPFPGAKDRVITIFCFVKD 91
Query: 367 SGPAHPDDR------ISAPQDAVLRVQTRIARA------IPDNREQTVMTRLLVASNQIG 414
DD + A QDA+L+V IA A + + ++L+ S+Q
Sbjct: 92 KEDVEVDDEFNDRQTLCAAQDALLKVHAAIANALASAGDLDRKQRDKEQCQILIPSSQSA 151
Query: 415 CLLGKGGSIIAEMRKLSGAYIRILGKDQ---IPKCASENEEVVLINGEFEAVQEALFQIT 471
++GK GS I ++R + I+I KD I CA + + +I GE E V+ ALF I+
Sbjct: 152 NVIGKAGSTIKKLRSKTRTSIKISPKDATDPIHSCAMDFDNFAVIAGEPEGVRRALFAIS 211
Query: 472 TRLRHHFFRDAFP-SINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVG 530
+ + R+ P N P + S P + S G+Y + P
Sbjct: 212 SIMYKFPPREEIPLDTNVNEAPPNIIIPSDVPLY------SAGGLYPSADPILPPRSI-- 263
Query: 531 GPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEV-GGPMGFPDFVGPPHR 589
PP G+ H D H P + P L V GG G PP
Sbjct: 264 -PPMLGAQHVQDLHDY-----------PESGNAWPLYSSSLPVVPGGISGH-----PPSE 306
Query: 590 R--VPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIIS 639
V V+ P + + G+ G +K IRQ S A++ + D K E +I IS
Sbjct: 307 ELVVRVLCPFDNIGRVIGKGGGTIKSIRQASGARVEVDDTKRDCDECIITIS 358
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 101/245 (41%), Gaps = 85/245 (34%)
Query: 33 YSENQPSKSFPGGI---------MFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEE 83
YS + P PGGI + RVLCP I VIGK G + I Q +G + V++
Sbjct: 288 YSSSLPV--VPGGISGHPPSEELVVRVLCPFDNIGRVIGKGGGTIKSIRQASGARVEVDD 345
Query: 84 TVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVL 143
T DE ++ I + ++
Sbjct: 346 TKRDCDECIITISSFES------------------------------------------- 362
Query: 144 MDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLG 203
+D L S V+ LLL + ++ D E ++RLL+ S +GC++G
Sbjct: 363 LDDLKS----MAVETVLLL----------QEKINDDEG---GTVIMRLLIPSKVIGCIIG 405
Query: 204 KGGCVIKQI-------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNS 250
K G +I +I DKL CA +SDE+V++TG+V VR AL I +L D++
Sbjct: 406 KSGSIINEIRKSTRADIRISKGDKL-KCASSSDELVEVTGKVGCVRDALVQIVLRLRDDA 464
Query: 251 PRDHE 255
++ +
Sbjct: 465 LKERD 469
>gi|449433573|ref|XP_004134572.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 625
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 144/518 (27%), Positives = 226/518 (43%), Gaps = 92/518 (17%)
Query: 5 LTPSKRPHDDDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIMFRVLCPVSKIDGVIGKD 64
+ KRP+ ++ NG K K ++ S +++R+LCP I VIGK
Sbjct: 1 MVSGKRPYGQRDY---NGDNKGYKRRITEQDDWVSDEL---VVYRILCPDEVIGSVIGKS 54
Query: 65 GEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEAS 124
G++++ I Q+T I+V + G+ +R++ I KE E
Sbjct: 55 GKVINSIRQETRAKIKVVDPFPGAKDRVITIFCFVKDKEDVE------------------ 96
Query: 125 VADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKS 184
V DE N + Q ALL V + D + +
Sbjct: 97 VDDE------------------FNDRQTLCAAQDALLKVHAAIANAL--ASAGDLDRKQR 136
Query: 185 SKFVLRLLVLSTQVGCLLGKGGCVIKQI----------------DKLPTCALASDEVVQI 228
K ++L+ S+Q ++GK G IK++ D + +CA+ D I
Sbjct: 137 DKEQCQILIPSSQSANVIGKAGSTIKKLRSKTRTSIKISPKDATDPIHSCAMDFDNFAVI 196
Query: 229 TGEVDTVRKALKLISHQLLDNSPRDH-----------------ESIPGNPTGPSHPLPDH 271
GE + VR+AL IS + PR+ +P G +P D
Sbjct: 197 AGEPEGVRRALFAISSIMYKFPPREEIPLDTNVNEAPPNIIIPSDVPLYSAGGLYPSADP 256
Query: 272 SVSSQGAPYATGHRDVADIH--------LPMPPSIPKFHESGVLDRPKPSPEILTFRLLC 323
+ + P G + V D+H P+ S G+ P PS E L R+LC
Sbjct: 257 ILPPRSIPPMLGAQHVQDLHDYPESGNAWPLYSSSLPVVPGGISGHP-PSEE-LVVRVLC 314
Query: 324 HDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAV 383
+ +G VIGKGG I+S++Q +G ++V + ++ +I IS DD S + V
Sbjct: 315 PFDNIGRVIGKGGGTIKSIRQASGARVEVDDTKRDCDECIITISSFESLDDLKSMAVETV 374
Query: 384 LRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQI 443
L +Q +I D+ TV+ RLL+ S IGC++GK GSII E+RK + A IRI D++
Sbjct: 375 LLLQEKIN----DDEGGTVIMRLLIPSKVIGCIIGKSGSIINEIRKSTRADIRISKGDKL 430
Query: 444 PKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRD 481
KCAS ++E+V + G+ V++AL QI RLR ++
Sbjct: 431 -KCASSSDELVEVTGKVGCVRDALVQIVLRLRDDALKE 467
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 102/351 (29%), Positives = 153/351 (43%), Gaps = 48/351 (13%)
Query: 313 SPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVI------ 366
S E++ +R+LC DE +G VIGK G +I S++QET IKV++ G +DR+I I
Sbjct: 32 SDELVVYRILCPDEVIGSVIGKSGKVINSIRQETRAKIKVVDPFPGAKDRVITIFCFVKD 91
Query: 367 SGPAHPDDR------ISAPQDAVLRVQTRIARA------IPDNREQTVMTRLLVASNQIG 414
DD + A QDA+L+V IA A + + ++L+ S+Q
Sbjct: 92 KEDVEVDDEFNDRQTLCAAQDALLKVHAAIANALASAGDLDRKQRDKEQCQILIPSSQSA 151
Query: 415 CLLGKGGSIIAEMRKLSGAYIRILGKDQ---IPKCASENEEVVLINGEFEAVQEALFQIT 471
++GK GS I ++R + I+I KD I CA + + +I GE E V+ ALF I+
Sbjct: 152 NVIGKAGSTIKKLRSKTRTSIKISPKDATDPIHSCAMDFDNFAVIAGEPEGVRRALFAIS 211
Query: 472 TRLRHHFFRDAFP-SINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVG 530
+ + R+ P N P + S P + S G+Y + P
Sbjct: 212 SIMYKFPPREEIPLDTNVNEAPPNIIIPSDVPLY------SAGGLYPSADPILPPRSI-- 263
Query: 531 GPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRR 590
PP G+ H D H P +P + P G G PP
Sbjct: 264 -PPMLGAQHVQDLHDYPESGNAWPLYSSSLP-VVPGGISG--------------HPPSEE 307
Query: 591 --VPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIIS 639
V V+ P + + G+ G +K IRQ S A++ + D K E +I IS
Sbjct: 308 LVVRVLCPFDNIGRVIGKGGGTIKSIRQASGARVEVDDTKRDCDECIITIS 358
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 45/73 (61%)
Query: 586 PPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQT 645
PP + +++P + + G+ GA + IR+IS A I I+D K + + +ISGT EQ
Sbjct: 552 PPPSSLEMLIPANAAGKVIGKGGANIANIRKISGALIEISDSKSSRGDRIALISGTSEQK 611
Query: 646 HAAQSLIQAFVMS 658
A++LIQAF+M+
Sbjct: 612 RTAENLIQAFIMA 624
>gi|224097168|ref|XP_002310861.1| predicted protein [Populus trichocarpa]
gi|222853764|gb|EEE91311.1| predicted protein [Populus trichocarpa]
Length = 404
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 127/436 (29%), Positives = 208/436 (47%), Gaps = 76/436 (17%)
Query: 43 PGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKK 102
PG + FRV+C SKI +IG G ++SQI +TG + EE V GS+ R +V+ S
Sbjct: 23 PGQVAFRVVCHASKIGALIGHSGSVISQIRLETGCLVHCEEAVKGSEHRAIVVAGS---- 78
Query: 103 ETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLL 162
AS ER G +E E S Q+A++
Sbjct: 79 -------ASPERKIAVGEDETV---------------------------EVSAAQEAVVR 104
Query: 163 VFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKL------- 215
V ERM EV+ + D E LL ++Q+G ++G+ G IK++ +
Sbjct: 105 VLERMWEVDAVKDGGDCEGYCG------LLANTSQIGAVVGREGRNIKRMKRASGAHIWI 158
Query: 216 ---PTCALASDEVVQITGEVDT-VRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDH 271
P CAL D+++QITG V+KA+ I+ L D P + + + + +
Sbjct: 159 LPAPLCALKEDQLIQITGSSTVAVKKAVIAITSCLQDCPPYEKDEVDLSL----EAVRRR 214
Query: 272 SVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDR--PKPSPEI-LTFRLLCHDERV 328
S G P+A + + +P + E+ D+ KP+ ++ + FR++C
Sbjct: 215 RSGSSGDPHAEFFPHLCSL-------LPTYSENIATDKDHKKPNEQLQVQFRMICPHGAA 267
Query: 329 GGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQT 388
G +IGKGG+++R+L+ +TG I + ++ ++ RL+ +S + + S Q+A+L V
Sbjct: 268 GSIIGKGGSVVRALQNQTGASIILAPPITNSDGRLVTVSALENLESSHSPAQNALLLVFA 327
Query: 389 RI-------ARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKD 441
R AR++ E TV LL+ SN++ CL+ +GG I +EM + +GA I+IL D
Sbjct: 328 RSIEHDIERARSLGLIEEITVTATLLLPSNRVSCLIERGGRIDSEMIETTGADIQILQGD 387
Query: 442 QIPKCASENEEVVLIN 457
Q CAS N+ V+ +
Sbjct: 388 QFFYCASNNDVVLQVQ 403
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 101/175 (57%), Gaps = 16/175 (9%)
Query: 314 PEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPD 373
P + FR++CH ++G +IG G++I ++ ETGC + EAV G+E R IV++G A P+
Sbjct: 23 PGQVAFRVVCHASKIGALIGHSGSVISQIRLETGCLVHCEEAVKGSEHRAIVVAGSASPE 82
Query: 374 DRI----------SAPQDAVLRVQTRIAR--AIPDNREQTVMTRLLVASNQIGCLLGKGG 421
+I SA Q+AV+RV R+ A+ D + LL ++QIG ++G+ G
Sbjct: 83 RKIAVGEDETVEVSAAQEAVVRVLERMWEVDAVKDGGDCEGYCGLLANTSQIGAVVGREG 142
Query: 422 SIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFE-AVQEALFQITTRLR 475
I M++ SGA+I IL P CA + ++++ I G AV++A+ IT+ L+
Sbjct: 143 RNIKRMKRASGAHIWILPA---PLCALKEDQLIQITGSSTVAVKKAVIAITSCLQ 194
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 85/222 (38%), Gaps = 76/222 (34%)
Query: 26 SQKLAGDYSENQPSKSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETV 85
S+ +A D +P++ + FR++CP +IGK G ++ + TG +I + +
Sbjct: 238 SENIATDKDHKKPNEQLQ--VQFRMICPHGAAGSIIGKGGSVVRALQNQTGASIILAPPI 295
Query: 86 SGSDERLVVIEASDNKKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMD 145
+ SD RLV + A ENLE+S
Sbjct: 296 TNSDGRLVTVSA-------LENLESS---------------------------------- 314
Query: 146 GLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSKFV------LRLLVLSTQVG 199
S Q ALLLVF R +E D E +S + LL+ S +V
Sbjct: 315 -------HSPAQNALLLVFARSIE-------HDIERARSLGLIEEITVTATLLLPSNRVS 360
Query: 200 CLLGKGGCV-------------IKQIDKLPTCALASDEVVQI 228
CL+ +GG + I Q D+ CA +D V+Q+
Sbjct: 361 CLIERGGRIDSEMIETTGADIQILQGDQFFYCASNNDVVLQV 402
>gi|308804768|ref|XP_003079696.1| putative KH domain containing protein (ISS) [Ostreococcus tauri]
gi|116058152|emb|CAL53341.1| putative KH domain containing protein (ISS), partial [Ostreococcus
tauri]
Length = 709
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 143/486 (29%), Positives = 230/486 (47%), Gaps = 87/486 (17%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASD----NK 101
+ FR+LCPV++I VIGK+G ++ + +TG ++V T G+DER+V++ + + +
Sbjct: 70 VQFRLLCPVARIGRVIGKEGRVIKALRAETGARVKVAPTTRGADERVVLVASGEELMMDD 129
Query: 102 KETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALL 161
+ S+ + ER+ R +VA ES + + DG +SE +
Sbjct: 130 GDGSDVPVTTAERALF--RIFDTVASESGGALDGT-------RDGTSSESGSGV------ 174
Query: 162 LVFERMVEVEPETEVADQE---NTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDK---- 214
PE+ E N + + RLLV QVG L+GKGG VI I
Sbjct: 175 ----------PESSSTGGERSMNGGRAVPICRLLVPRAQVGSLIGKGGAVISAIRASSGA 224
Query: 215 ---------LPTCALASDEVVQITG--------EVD----TVRKALKLISHQLLDNSPRD 253
LPTCA DE++QIT +VD +V+ AL++++ L R+
Sbjct: 225 TVRLMPATMLPTCASRGDELLQITAPVRDTDGNDVDLALASVKSALRMVAKNL-----RE 279
Query: 254 HESIPGNPTGPSHPL--------PDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESG 305
+ + PL P + G A + H+ + + +G
Sbjct: 280 YPTKMATSESFRSPLEAFMLGIKPGANADGDGGNGAGIAGGSSGGHMS-----TRMNLNG 334
Query: 306 VLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIV 365
V P + FRLLC + G VIG+ G +I+ ++ ETG +KV E ++ E+R+I
Sbjct: 335 VY---VPGGTEIMFRLLCPVSKTGSVIGRNGEVIQQIRSETGAKVKVCEQINNAEERIIC 391
Query: 366 ISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMT--RLLVASNQIGCLLGKGGSI 423
+S DD + AP A R+ R I D+ V RLLV ++QIGCL+GKGGSI
Sbjct: 392 VS---SNDDGL-APMLAAQVALFRVYRCIVDSSGSDVPLPFRLLVQTSQIGCLIGKGGSI 447
Query: 424 IAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEF--EAVQEALFQITTRLRHHFFRD 481
I ++R +GA +R+L D +P CA+ ++E++ I G++ +A + ++ RLR +
Sbjct: 448 IRQIRNETGATVRVLPSDALPACANADDELLEI-GQWPADACALGIRIVSGRLRGNMRHK 506
Query: 482 AFPSIN 487
A +N
Sbjct: 507 AAERLN 512
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 45/60 (75%), Gaps = 2/60 (3%)
Query: 43 PGG--IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDN 100
PGG IMFR+LCPVSK VIG++GE++ QI +TG ++V E ++ ++ER++ + ++D+
Sbjct: 338 PGGTEIMFRLLCPVSKTGSVIGRNGEVIQQIRSETGAKVKVCEQINNAEERIICVSSNDD 397
>gi|115475229|ref|NP_001061211.1| Os08g0200400 [Oryza sativa Japonica Group]
gi|38636959|dbj|BAD03220.1| putative KH domain protein [Oryza sativa Japonica Group]
gi|113623180|dbj|BAF23125.1| Os08g0200400 [Oryza sativa Japonica Group]
gi|215695475|dbj|BAG90642.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 441
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 144/480 (30%), Positives = 222/480 (46%), Gaps = 81/480 (16%)
Query: 220 LASDEVVQITGEVDTVRKALKLISHQL----------LDNSPRDH-------ESIPGNPT 262
++ D VQITG+ VRKAL +S + L+ S D +P P+
Sbjct: 1 MSFDNFVQITGDARAVRKALFAVSTIIYKCPSKETIPLETSVSDLPPSIIVPSELPVYPS 60
Query: 263 GPSHPLPDHSVSSQ--------GAPYATGHRDVADIHLPMP------PSIPKFHESGVLD 308
+ D ++SS P+ AD H +P P IP + +
Sbjct: 61 SNFYSPSDAAISSGHPSLSILGSTPHVPELTVSADAHSRLPIYQSVLPVIPAY------N 114
Query: 309 RPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
PK S E L R+LC ++G VIGKGG I+S+++E+G I V ++ + E+ +I I+
Sbjct: 115 TPKCSGE-LVLRVLCPAGKIGLVIGKGGVTIKSIRKESGARIDVDDSKNDREESIITITS 173
Query: 369 PAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMR 428
DD SA +AVL +Q++I D+ E + RLLV IGCL+GKGGSI+ +MR
Sbjct: 174 NEATDDAKSAAVEAVLLLQSKIN----DDNEGKMNLRLLVPGKVIGCLIGKGGSIVNDMR 229
Query: 429 KLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINR 488
+ A I I K + P+ AS ++E+V + GE E +++AL QI RLR RD+ N
Sbjct: 230 SKTKAAIYI-SKGEKPRKASSSDELVEVFGEVENLRDALVQIVLRLRDDVLRDSVDRQNS 288
Query: 489 ---------PLNPTFLDQVSPFPSFI-GRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSF 538
+P + P P+ + R++++P G +D G
Sbjct: 289 EKDGKLTVATTDPLYASSY-PLPALLPYRQQITPLG-----------YDHRGDIERGLEV 336
Query: 539 HPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRS 598
+P HS+ + + + + +G GG PPH + + +P S
Sbjct: 337 YP---HSSLYGYSSLQAIDDGYSAVSSYASKGY---GGR--------PPH--MEMTIPAS 380
Query: 599 LVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMS 658
+ + G+ G L I +IS A I I + K V ISGT EQ +A++LI+AF+MS
Sbjct: 381 GLSKVMGKHGTNLDNIIKISGAHIEIIESKSSRHGHVARISGTTEQKQSAENLIKAFIMS 440
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 94/222 (42%), Gaps = 72/222 (32%)
Query: 44 GGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKE 103
G ++ RVLCP KI VIGK G + I +++G I V+++
Sbjct: 120 GELVLRVLCPAGKIGLVIGKGGVTIKSIRKESGARIDVDDS------------------- 160
Query: 104 TSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLV 163
N REE+ + S+ +D+ +++ V+ LLL
Sbjct: 161 -------------KNDREESIITITSNEATDDA---------------KSAAVEAVLLL- 191
Query: 164 FERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI----------- 212
++++ D K LRLLV +GCL+GKGG ++ +
Sbjct: 192 ---------QSKINDDNE---GKMNLRLLVPGKVIGCLIGKGGSIVNDMRSKTKAAIYIS 239
Query: 213 -DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRD 253
+ P A +SDE+V++ GEV+ +R AL I +L D+ RD
Sbjct: 240 KGEKPRKASSSDELVEVFGEVENLRDALVQIVLRLRDDVLRD 281
>gi|297849822|ref|XP_002892792.1| hypothetical protein ARALYDRAFT_471578 [Arabidopsis lyrata subsp.
lyrata]
gi|297338634|gb|EFH69051.1| hypothetical protein ARALYDRAFT_471578 [Arabidopsis lyrata subsp.
lyrata]
Length = 477
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 145/476 (30%), Positives = 225/476 (47%), Gaps = 85/476 (17%)
Query: 21 NGKEKSQKLAGDYSENQPSKSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIR 80
NG K + L D +N ++R LCPV K +IGK G++ QI +T +R
Sbjct: 22 NGGSKRRNLHDDTDQNVIGSE---ETVYRYLCPVKKTGSIIGKGGDIAKQIRSETKSNMR 78
Query: 81 VEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASVADESDNKKEDSV-NE 139
+ E + G EE V S N++ + ++
Sbjct: 79 INEALPGC--------------------------------EERVVTIYSTNEELNHFGDD 106
Query: 140 GSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSKFV-LRLLVLSTQV 198
G ++ L+ AL V + +V + D ++ + V +R+LV S Q+
Sbjct: 107 GELVCPALD----------ALFKVHDMVVADIDHDDGNDDDDLGEKQTVTVRMLVPSDQI 156
Query: 199 GCLLGKGGCVIKQI------------DKLPTCAL--ASDEVVQITGEVDTVRKALKLISH 244
GC++GKGG VI+ + D LP+CAL + DE++QI GE VR+AL ++
Sbjct: 157 GCVIGKGGQVIQNLRNDTNAQIRVIKDHLPSCALTLSHDELLQIIGEPLVVREALYQVAS 216
Query: 245 QLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHES 304
L N R + + + P GA + M ++ H +
Sbjct: 217 LLHANPSRFQHLLLSSSSSMHQP---------GA-------------MLMSAALTSSHRN 254
Query: 305 GVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLI 364
+ R +C E VGGVIGKGG I ++QETG I+V + + +D +I
Sbjct: 255 YAVRRDIADAREFCVCFICPAENVGGVIGKGGGFINQIRQETGATIRVNTSETDEDDCII 314
Query: 365 VISGPAHPDDRISAPQDAVLRVQTRIARAI-PDNREQTVMTRLLVASNQIGCLLGKGGSI 423
VIS +D+ S +A +R+Q R + + D + + TRLLV+S+QIGCL+GKGG++
Sbjct: 315 VISSKEFYEDQ-SPAVNAAIRLQQRCSEKVGKDANDLAISTRLLVSSSQIGCLIGKGGAV 373
Query: 424 IAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFF 479
I+EMR ++ A IRIL K+ +PK A E+EE+V I G +A +AL Q+ RLR + F
Sbjct: 374 ISEMRSVTRANIRILQKEDVPKIAREDEEMVQITGNPDAAMKALTQVILRLRANSF 429
>gi|186478468|ref|NP_001117282.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|5080792|gb|AAD39302.1|AC007576_25 Unknown protein [Arabidopsis thaliana]
gi|332190995|gb|AEE29116.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 479
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 149/477 (31%), Positives = 226/477 (47%), Gaps = 85/477 (17%)
Query: 21 NGKEKSQKLAGDYSENQPSKSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIR 80
NG K + L + +N + ++R LCPV K +IGK GE+ QI +T +R
Sbjct: 22 NGGSKRRNLHDETDQNVIASE---DTVYRYLCPVKKTGSIIGKGGEIAKQIRSETKSNMR 78
Query: 81 VEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASVADESDNKKEDSV-NE 139
+ E + G EE V S N++ + ++
Sbjct: 79 INEALPGC--------------------------------EERVVTMYSTNEELNHFGDD 106
Query: 140 GSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQ 197
G ++ L+ AL V + +V + + D +N K +R+LV S Q
Sbjct: 107 GELVCPALD----------ALFKVHDMVVADADQDDGTDDDNDLGEKQTVTVRMLVPSDQ 156
Query: 198 VGCLLGKGGCVIKQI------------DKLPTCAL--ASDEVVQITGEVDTVRKALKLIS 243
+GC++GKGG VI+ + D LP CAL + DE++ I GE VR+AL ++
Sbjct: 157 IGCVIGKGGQVIQNLRNDTNAQIRVIKDHLPACALTLSHDELLLIIGEPLVVREALYQVA 216
Query: 244 HQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHE 303
L DN P+ H L S SS P A + M ++ H
Sbjct: 217 SLLHDN-----------PSRFQHLLLSSSSSSMHQPGA----------MLMSAALTSSHR 255
Query: 304 SGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRL 363
+ + R +C E VGGVIGKGG I ++QETG I+V + + +D +
Sbjct: 256 NYAVRRDIADAREFCVCFICPAENVGGVIGKGGGFINQIRQETGATIRVNTSETDDDDCI 315
Query: 364 IVISGPAHPDDRISAPQDAVLRVQTRIARAI-PDNREQTVMTRLLVASNQIGCLLGKGGS 422
I IS +D+ S +A +R+Q R + + D + + TRLLV+S+QIGCL+GKGG+
Sbjct: 316 IFISSKEFYEDQ-SPAVNAAIRLQQRCSEKVGKDANDLAISTRLLVSSSQIGCLIGKGGA 374
Query: 423 IIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFF 479
+I+EMR ++ A IRIL K+ +PK A E+EE+V I G +A +AL Q+ RLR + F
Sbjct: 375 VISEMRSVTRANIRILQKEDVPKIAREDEEMVQITGSPDAAMKALTQVILRLRANSF 431
>gi|79317957|ref|NP_001031044.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|222424209|dbj|BAH20063.1| AT1G14170 [Arabidopsis thaliana]
gi|332190994|gb|AEE29115.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 446
Score = 152 bits (383), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 144/451 (31%), Positives = 217/451 (48%), Gaps = 82/451 (18%)
Query: 47 MFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSE 106
++R LCPV K +IGK GE+ QI +T +R+ E + G
Sbjct: 12 VYRYLCPVKKTGSIIGKGGEIAKQIRSETKSNMRINEALPGC------------------ 53
Query: 107 NLEASIERSENNGREEASVADESDNKKEDSV-NEGSVLMDGLNSEKETSKVQKALLLVFE 165
EE V S N++ + ++G ++ L+ AL V +
Sbjct: 54 --------------EERVVTMYSTNEELNHFGDDGELVCPALD----------ALFKVHD 89
Query: 166 RMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIKQI----------- 212
+V + + D +N K +R+LV S Q+GC++GKGG VI+ +
Sbjct: 90 MVVADADQDDGTDDDNDLGEKQTVTVRMLVPSDQIGCVIGKGGQVIQNLRNDTNAQIRVI 149
Query: 213 -DKLPTCAL--ASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLP 269
D LP CAL + DE++ I GE VR+AL ++ L DN P+ H L
Sbjct: 150 KDHLPACALTLSHDELLLIIGEPLVVREALYQVASLLHDN-----------PSRFQHLLL 198
Query: 270 DHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVG 329
S SS P A + M ++ H + + R +C E VG
Sbjct: 199 SSSSSSMHQPGA----------MLMSAALTSSHRNYAVRRDIADAREFCVCFICPAENVG 248
Query: 330 GVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTR 389
GVIGKGG I ++QETG I+V + + +D +I IS +D+ S +A +R+Q R
Sbjct: 249 GVIGKGGGFINQIRQETGATIRVNTSETDDDDCIIFISSKEFYEDQ-SPAVNAAIRLQQR 307
Query: 390 IARAI-PDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCAS 448
+ + D + + TRLLV+S+QIGCL+GKGG++I+EMR ++ A IRIL K+ +PK A
Sbjct: 308 CSEKVGKDANDLAISTRLLVSSSQIGCLIGKGGAVISEMRSVTRANIRILQKEDVPKIAR 367
Query: 449 ENEEVVLINGEFEAVQEALFQITTRLRHHFF 479
E+EE+V I G +A +AL Q+ RLR + F
Sbjct: 368 EDEEMVQITGSPDAAMKALTQVILRLRANSF 398
>gi|30683629|ref|NP_172869.2| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|30102666|gb|AAP21251.1| At1g14170 [Arabidopsis thaliana]
gi|110743444|dbj|BAE99608.1| hypothetical protein [Arabidopsis thaliana]
gi|332190993|gb|AEE29114.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 454
Score = 152 bits (383), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 144/451 (31%), Positives = 217/451 (48%), Gaps = 82/451 (18%)
Query: 47 MFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSE 106
++R LCPV K +IGK GE+ QI +T +R+ E + G
Sbjct: 20 VYRYLCPVKKTGSIIGKGGEIAKQIRSETKSNMRINEALPGC------------------ 61
Query: 107 NLEASIERSENNGREEASVADESDNKKEDSV-NEGSVLMDGLNSEKETSKVQKALLLVFE 165
EE V S N++ + ++G ++ L+ AL V +
Sbjct: 62 --------------EERVVTMYSTNEELNHFGDDGELVCPALD----------ALFKVHD 97
Query: 166 RMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIKQI----------- 212
+V + + D +N K +R+LV S Q+GC++GKGG VI+ +
Sbjct: 98 MVVADADQDDGTDDDNDLGEKQTVTVRMLVPSDQIGCVIGKGGQVIQNLRNDTNAQIRVI 157
Query: 213 -DKLPTCAL--ASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLP 269
D LP CAL + DE++ I GE VR+AL ++ L DN P+ H L
Sbjct: 158 KDHLPACALTLSHDELLLIIGEPLVVREALYQVASLLHDN-----------PSRFQHLLL 206
Query: 270 DHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVG 329
S SS P A + M ++ H + + R +C E VG
Sbjct: 207 SSSSSSMHQPGA----------MLMSAALTSSHRNYAVRRDIADAREFCVCFICPAENVG 256
Query: 330 GVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTR 389
GVIGKGG I ++QETG I+V + + +D +I IS +D+ S +A +R+Q R
Sbjct: 257 GVIGKGGGFINQIRQETGATIRVNTSETDDDDCIIFISSKEFYEDQ-SPAVNAAIRLQQR 315
Query: 390 IARAI-PDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCAS 448
+ + D + + TRLLV+S+QIGCL+GKGG++I+EMR ++ A IRIL K+ +PK A
Sbjct: 316 CSEKVGKDANDLAISTRLLVSSSQIGCLIGKGGAVISEMRSVTRANIRILQKEDVPKIAR 375
Query: 449 ENEEVVLINGEFEAVQEALFQITTRLRHHFF 479
E+EE+V I G +A +AL Q+ RLR + F
Sbjct: 376 EDEEMVQITGSPDAAMKALTQVILRLRANSF 406
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 106/200 (53%), Gaps = 25/200 (12%)
Query: 294 MPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVM 353
M ++ H+ V+ + E +R LC ++ G +IGKGG I + ++ ET ++++
Sbjct: 1 MASTLRNIHDQNVI-----ASEDTVYRYLCPVKKTGSIIGKGGEIAKQIRSETKSNMRIN 55
Query: 354 EAVSGTEDRLIVISGPAHP------DDRISAPQ-DAVLRVQTRIARAIPD---------- 396
EA+ G E+R++ + D + P DA+ +V +
Sbjct: 56 EALPGCEERVVTMYSTNEELNHFGDDGELVCPALDALFKVHDMVVADADQDDGTDDDNDL 115
Query: 397 NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCA--SENEEVV 454
+QTV R+LV S+QIGC++GKGG +I +R + A IR++ KD +P CA ++E++
Sbjct: 116 GEKQTVTVRMLVPSDQIGCVIGKGGQVIQNLRNDTNAQIRVI-KDHLPACALTLSHDELL 174
Query: 455 LINGEFEAVQEALFQITTRL 474
LI GE V+EAL+Q+ + L
Sbjct: 175 LIIGEPLVVREALYQVASLL 194
>gi|30681758|ref|NP_850026.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|330252232|gb|AEC07326.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 632
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 176/672 (26%), Positives = 289/672 (43%), Gaps = 114/672 (16%)
Query: 42 FPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNK 101
P RV+C S I G+IG +G ++S++ ++TG I E V+GSD +V I S
Sbjct: 21 LPDETAIRVVCHASVIGGIIGSNGYVVSKLRRETGTKIHCESPVNGSDHWVVFIVGS--- 77
Query: 102 KETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALL 161
T+ N SI ++ V + S + ED V E S Q AL+
Sbjct: 78 --TAVN--QSILLTDR-------VGEFSGGEHEDWVT------------CEVSAAQTALI 114
Query: 162 LVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKL------ 215
V ER V + + + + +L Q+G +LG GG ++ + +
Sbjct: 115 RVLERSWVVLAAKDGGGVVDGEDEEAYCGILADRNQIGAVLGLGGKNVEWMRRNSGAMIR 174
Query: 216 ----PTCALASDEVVQITGEVDTVRKALKLISHQLLDNSP----------RDHESIP--G 259
P C +DE++QITG+V V+KAL ++S + +N+P + +ES+ G
Sbjct: 175 VLPPPICGTKNDELIQITGDVLAVKKALVMVSSYIQNNAPLNGYPPPLSIKGYESLSTDG 234
Query: 260 NPTGP-SHPLPD--HSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEI 316
N P S P+ S S +R HLP D +
Sbjct: 235 NSEDPHSEFFPNLRSSSLSNATEIVASNR-----HLPY-------------DGGNSTERK 276
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
+ F+++ GG+IGK G IIR+L+ ETG I V + + +R++ +S + + R
Sbjct: 277 VVFKIIFTSVVAGGIIGKQGTIIRALQNETGASISVGAPLKVSGERVVTVSARENLESRY 336
Query: 377 SAPQDAVLRVQTRIARAIPDNREQ----------TVMTRLLVASNQIGCLLGKGG--SII 424
S Q+A+ V AR++ + E+ V T+LLV S+ G G +II
Sbjct: 337 SHAQNALALV---FARSVEIDVEKGLRPGLHNGAIVKTKLLVPSHFANSFNGNGNREAII 393
Query: 425 AEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFP 484
A +GA + I +Q+ + SENE V+ I GE+ VQ+AL ++++LR + P
Sbjct: 394 A-----TGADVHISVGNQVLEWISENEVVIEIKGEYSHVQKALTHVSSKLRENL----LP 444
Query: 485 SINRPLNPTFLDQVSPFPSFIGRRE---LSPPGMYSNFGPSFHKFDAV--------GGPP 533
+ L +P+ S GR + L P ++ G S AV G
Sbjct: 445 --KKVLGEMRARVSNPYESAGGRSQIYNLQPSQQDASRGDSLSVSAAVPDLKMVRSGAEV 502
Query: 534 PPGSFHPHDDHSAFMHHIHRPGMPPHM--PDMKPWGPQGLMEVGGPMGF--PDFVGPPHR 589
+ H + + ++ +P + D+ Q M G + P G R
Sbjct: 503 LKSNSVMHTEVLKEVDELNDFTLPQSLLEEDLTQGMKQLQMSSNGDVSSLPPRSKGVSVR 562
Query: 590 RVP--VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHA 647
++ + V + + + G DG + ++QIS A + + DP TE ++ISG PEQ
Sbjct: 563 KITLELAVEKDALGSLYGRDGTGVDNLQQISGANVDVKDPT--GTEATVLISGNPEQART 620
Query: 648 AQSLIQAFVMSE 659
A SLI++ + +
Sbjct: 621 AMSLIESILTDQ 632
>gi|224076902|ref|XP_002305041.1| predicted protein [Populus trichocarpa]
gi|222848005|gb|EEE85552.1| predicted protein [Populus trichocarpa]
Length = 623
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 132/482 (27%), Positives = 215/482 (44%), Gaps = 86/482 (17%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
+++R+LCP I VIGK G++++ I ++ ++V + G+ R++ I +
Sbjct: 36 VVYRILCPDEVIGSVIGKSGKVINSIRNESRARVKVVDPFPGAMYRVITIYCN------- 88
Query: 106 ENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFE 165
V ++ D +D ++ L Q ALL V
Sbjct: 89 -------------------VKEKGDADVDDDFHQADPL----------CPAQDALLKVHA 119
Query: 166 RMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI------------- 212
+ + D + K ++LV ++Q ++GK G IK++
Sbjct: 120 AISNAV--AALGDSDKRCRDKKECQILVPTSQSANIIGKAGATIKKLRSKTRANIKITAK 177
Query: 213 ---DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLP 269
D +CA+ D + ITGE + V+KAL +S + SP+ E IP T P P P
Sbjct: 178 DASDPTHSCAMDFDNFLLITGESEAVKKALFAVSAIMYKFSPK--EEIPLETTVPEAP-P 234
Query: 270 DHSVSSQGAPYATG----HRDVADIHLPMPP-----SIPKFHESGVLDRPKP-------- 312
+SS Y G + D +PP IP+F G + P
Sbjct: 235 SIIISSDVPIYQPGGFYPNADPIVSSRSVPPILGATHIPEFQGYGDMRSSWPIYSSTVPV 294
Query: 313 -------SPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIV 365
S L RLLC +++G VIGKGG+ I+S++Q +G I+V + + ++ +I
Sbjct: 295 VPSFGNTSRSELIIRLLCPFDKIGRVIGKGGSTIKSIRQVSGARIEVDDTKADRDECIIT 354
Query: 366 ISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIA 425
+ PDD S +A+L +Q +I D V R LV S IGC++GK G+I+
Sbjct: 355 VIATESPDDLKSMAVEAILLLQGKIN----DEDNDIVGIRFLVPSKVIGCIIGKSGAIVN 410
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPS 485
E+RK + A + I D++ KCA N+E+V + GE +V++AL QI RLR ++
Sbjct: 411 EIRKRTNADVCISKVDKL-KCADSNDELVEVAGEVGSVRDALVQIVLRLRDDVLKEKDGG 469
Query: 486 IN 487
+N
Sbjct: 470 LN 471
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 164/373 (43%), Gaps = 62/373 (16%)
Query: 315 EILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVI------SG 368
E++ +R+LC DE +G VIGK G +I S++ E+ +KV++ G R+I I G
Sbjct: 34 ELVVYRILCPDEVIGSVIGKSGKVINSIRNESRARVKVVDPFPGAMYRVITIYCNVKEKG 93
Query: 369 PA------HPDDRISAPQDAVLRVQTRIARAIP-----DNR-EQTVMTRLLVASNQIGCL 416
A H D + QDA+L+V I+ A+ D R ++LV ++Q +
Sbjct: 94 DADVDDDFHQADPLCPAQDALLKVHAAISNAVAALGDSDKRCRDKKECQILVPTSQSANI 153
Query: 417 LGKGGSIIAEMRKLSGAYIRILGKDQ---IPKCASENEEVVLINGEFEAVQEALFQITTR 473
+GK G+ I ++R + A I+I KD CA + + +LI GE EAV++ALF ++
Sbjct: 154 IGKAGATIKKLRSKTRANIKITAKDASDPTHSCAMDFDNFLLITGESEAVKKALFAVSAI 213
Query: 474 LRHHFFRDAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPP 533
+ ++ P L+ P E P + S+ P +
Sbjct: 214 MYKFSPKEEIP----------LETTVP--------EAPPSIIISSDVPIYQ--------- 246
Query: 534 PPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMG------FPDFVGPP 587
PG F+P+ D + H+P+ + +G M P+ P F G
Sbjct: 247 -PGGFYPNADPIVSSRSVPPILGATHIPEFQGYGD---MRSSWPIYSSTVPVVPSF-GNT 301
Query: 588 HRR---VPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQ 644
R + ++ P + + G+ G+ +K IRQ+S A+I + D K E +I + T
Sbjct: 302 SRSELIIRLLCPFDKIGRVIGKGGSTIKSIRQVSGARIEVDDTKADRDECIITVIATESP 361
Query: 645 THAAQSLIQAFVM 657
++A ++
Sbjct: 362 DDLKSMAVEAILL 374
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 152/368 (41%), Gaps = 114/368 (30%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
++ R+LCP KI VIGK G + I Q +G I V++T + DE ++ + A+ E+
Sbjct: 306 LIIRLLCPFDKIGRVIGKGGSTIKSIRQVSGARIEVDDTKADRDECIITVIAT----ESP 361
Query: 106 ENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFE 165
++L+ S +A+LL+
Sbjct: 362 DDLK--------------------------------------------SMAVEAILLL-- 375
Query: 166 RMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI------------- 212
+ ++ D++N +R LV S +GC++GK G ++ +I
Sbjct: 376 -------QGKINDEDNDIVG---IRFLVPSKVIGCIIGKSGAIVNEIRKRTNADVCISKV 425
Query: 213 DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDH- 271
DKL CA ++DE+V++ GEV +VR AL I +L D+ ++ + + G P H
Sbjct: 426 DKL-KCADSNDELVEVAGEVGSVRDALVQIVLRLRDDVLKEKDGGLNSSVGTDSVYPVHA 484
Query: 272 -----SVSSQGAPYA-TGHRDVAD----------------IHLPM---------PPSIPK 300
S+ P A G+ A+ LPM S+ K
Sbjct: 485 GISIPSILPSVPPVAPMGYDQRAESGSGLGLFSSSSLYGYGSLPMGENSYGSLASYSLSK 544
Query: 301 FHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTE 360
+E P PS T +L VG VIGKGGA I ++++ +G I++ +A S
Sbjct: 545 LYEG----LPPPS----TLEMLVPANAVGKVIGKGGANIANIRKISGAMIEISDAKSARG 596
Query: 361 DRLIVISG 368
DR+ ISG
Sbjct: 597 DRIAYISG 604
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 46/73 (63%)
Query: 586 PPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQT 645
PP + ++VP + V + G+ GA + IR+IS A I I+D K + + ISG PEQ
Sbjct: 550 PPPSTLEMLVPANAVGKVIGKGGANIANIRKISGAMIEISDAKSARGDRIAYISGKPEQK 609
Query: 646 HAAQSLIQAFVMS 658
AA++LIQAF+M+
Sbjct: 610 QAAENLIQAFIMA 622
>gi|30684386|ref|NP_849406.1| KH domain-containing protein [Arabidopsis thaliana]
gi|24762211|gb|AAN64172.1| putative KH domain protein [Arabidopsis thaliana]
gi|332658635|gb|AEE84035.1| KH domain-containing protein [Arabidopsis thaliana]
Length = 532
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 152/556 (27%), Positives = 248/556 (44%), Gaps = 125/556 (22%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
+++R+LCP+ + GVIGK G++++ I +T I+V + + G +R++ I S +K+
Sbjct: 36 VVYRILCPIDVVGGVIGKSGKVINAIRHNTKAKIKVFDQLHGCSQRVITIYCSVKEKQE- 94
Query: 106 ENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFE 165
E +SEN E A Q ALL V++
Sbjct: 95 ---EIGFTKSEN---EPLCCA------------------------------QDALLKVYD 118
Query: 166 RMVEVEPETEV---ADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI---------- 212
+V + E D+++ K RLLV +Q L+GK G IK+I
Sbjct: 119 AIVASDEENNTKTNVDRDDNKE----CRLLVPFSQSSSLIGKAGENIKRIRRRTRASVKV 174
Query: 213 ------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSH 266
D CA+ D VV I+GE ++V++AL +S + +PR E+IP + T
Sbjct: 175 VSKDVSDPSHVCAMEYDNVVVISGEPESVKQALFAVSAIMYKINPR--ENIPLDSTSQDV 232
Query: 267 PLPD--------HSVSSQGAPYAT------------------------GHRDVADIHLPM 294
P +SV Q Y+ G+ + A +P+
Sbjct: 233 PAASVIVPSDLSNSVYPQTGFYSNQDHILQQGAGVPSYFNALSVSDFQGYAETAANPVPV 292
Query: 295 -PPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVM 353
S+P H G R E L F++LC + VIGKGG+ I+ +++ +G I+V
Sbjct: 293 FASSLPVTHGFGGSSRS----EELVFKVLCPLCNIMRVIGKGGSTIKRIREASGSCIEVN 348
Query: 354 EAVS--GTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASN 411
++ + G ++ +I+++ PDD S +AVL +Q I D + V +LLV+S
Sbjct: 349 DSRTKCGDDECVIIVTATESPDDMKSMAVEAVLLLQ----EYINDEDAENVKMQLLVSSK 404
Query: 412 QIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQIT 471
IGC++GK GS+I E+RK + A I I + +++V ++GE +V++AL QI
Sbjct: 405 VIGCVIGKSGSVINEIRKRTNANICI--------SKGKKDDLVEVSGEVSSVRDALIQIV 456
Query: 472 TRLRHHFF--RDAFPSIN---RPLNPTFLDQVS----PFPSFIGRRELSPPGMYSNFGPS 522
RLR +D+ + R N +FL S PSF+ ++ + +G S
Sbjct: 457 LRLREDVLGDKDSVATRKPPARTDNCSFLSGSSNAGYTLPSFMS--SMASTSGFHGYG-S 513
Query: 523 FHKFDAVGGPPPPGSF 538
F D V G P S+
Sbjct: 514 FPAGDNVLGSTGPYSY 529
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 155/362 (42%), Gaps = 64/362 (17%)
Query: 315 EILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAH--- 371
E++ +R+LC + VGGVIGK G +I +++ T IKV + + G R+I I
Sbjct: 34 ELVVYRILCPIDVVGGVIGKSGKVINAIRHNTKAKIKVFDQLHGCSQRVITIYCSVKEKQ 93
Query: 372 --------PDDRISAPQDAVLRVQTRIARAIPDNREQTVM-------TRLLVASNQIGCL 416
++ + QDA+L+V I + +N +T + RLLV +Q L
Sbjct: 94 EEIGFTKSENEPLCCAQDALLKVYDAIVASDEENNTKTNVDRDDNKECRLLVPFSQSSSL 153
Query: 417 LGKGGSIIAEMRKLSGAYIRILGKDQIP---KCASENEEVVLINGEFEAVQEALFQITTR 473
+GK G I +R+ + A ++++ KD CA E + VV+I+GE E+V++ALF ++
Sbjct: 154 IGKAGENIKRIRRRTRASVKVVSKDVSDPSHVCAMEYDNVVVISGEPESVKQALFAVSA- 212
Query: 474 LRHHFFRDAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPP 533
P N PL+ T D P S I +LS +Y
Sbjct: 213 ----IMYKINPRENIPLDSTSQD--VPAASVIVPSDLS-NSVY----------------- 248
Query: 534 PPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGG------------PMGFP 581
P F+ + DH + G+P + + QG E GF
Sbjct: 249 PQTGFYSNQDH--ILQ--QGAGVPSYFNALSVSDFQGYAETAANPVPVFASSLPVTHGFG 304
Query: 582 DFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDP--KPGATETVIIIS 639
V+ P + + G+ G+ +K+IR+ S + I + D K G E VII++
Sbjct: 305 GSSRSEELVFKVLCPLCNIMRVIGKGGSTIKRIREASGSCIEVNDSRTKCGDDECVIIVT 364
Query: 640 GT 641
T
Sbjct: 365 AT 366
>gi|388509486|gb|AFK42809.1| unknown [Lotus japonicus]
Length = 134
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/133 (57%), Positives = 89/133 (66%), Gaps = 18/133 (13%)
Query: 548 MHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRV--------PVVVPRSL 599
M++IHR G+PPH+ + KPWGPQG++E GG MG PDF G P RR+ P++ S
Sbjct: 1 MNNIHRSGIPPHIAERKPWGPQGILEGGGHMGLPDFAGGPPRRILGFGGGNQPIITHTSA 60
Query: 600 VPI----------IQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQ 649
I GEDG CL+QI QI DAKI ITDPKPGA ET IIISGTPEQTH AQ
Sbjct: 61 TVEVVVPRAVVPEIYGEDGECLRQILQIFDAKIMITDPKPGAVETKIIISGTPEQTHTAQ 120
Query: 650 SLIQAFVMSETET 662
S IQAFVMSE ++
Sbjct: 121 SFIQAFVMSERDS 133
>gi|218200638|gb|EEC83065.1| hypothetical protein OsI_28176 [Oryza sativa Indica Group]
gi|222640076|gb|EEE68208.1| hypothetical protein OsJ_26373 [Oryza sativa Japonica Group]
Length = 431
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 141/480 (29%), Positives = 218/480 (45%), Gaps = 91/480 (18%)
Query: 220 LASDEVVQITGEVDTVRKALKLISHQL----------LDNSPRDH-------ESIPGNPT 262
++ D VQITG+ VRKAL +S + L+ S D +P P+
Sbjct: 1 MSFDNFVQITGDARAVRKALFAVSTIIYKCPSKETIPLETSVSDLPPSIIVPSELPVYPS 60
Query: 263 GPSHPLPDHSVSSQ--------GAPYATGHRDVADIHLPMP------PSIPKFHESGVLD 308
+ D ++SS P+ AD H +P P IP + +
Sbjct: 61 SNFYSPSDAAISSGHPSLSILGSTPHVPELTVSADAHSRLPIYQSVLPVIPAY------N 114
Query: 309 RPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
PK S E L R+LC ++G VIGKGG I+S+++E+G I V ++ + E+ +I I+
Sbjct: 115 TPKCSGE-LVLRVLCPAGKIGLVIGKGGVTIKSIRKESGARIDVDDSKNDREESIITITS 173
Query: 369 PAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMR 428
DD SA +AVL +Q++I D+ E V IGCL+GKGGSI+ +MR
Sbjct: 174 NEATDDAKSAAVEAVLLLQSKIN----DDNEGKV----------IGCLIGKGGSIVNDMR 219
Query: 429 KLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINR 488
+ A I I K + P+ AS ++E+V + GE E +++AL QI RLR RD+ N
Sbjct: 220 SKTKAAIYI-SKGEKPRKASSSDELVEVFGEVENLRDALVQIVLRLRDDVLRDSVDRQNS 278
Query: 489 ---------PLNPTFLDQVSPFPSFI-GRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSF 538
+P + P P+ + R++++P G +D G
Sbjct: 279 EKDGKLTVATTDPLYASSY-PLPALLPYRQQITPLG-----------YDHRGDIERGLEV 326
Query: 539 HPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRS 598
+P HS+ + + + + +G GG PPH + + +P S
Sbjct: 327 YP---HSSLYGYSSLQAIDDGYSAVSSYASKGY---GGR--------PPH--MEMTIPAS 370
Query: 599 LVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMS 658
+ + G+ G L I +IS A I I + K V ISGT EQ +A++LI+AF+MS
Sbjct: 371 GLSKVMGKHGTNLDNIIKISGAHIEIIESKSSRHGHVARISGTTEQKQSAENLIKAFIMS 430
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 89/222 (40%), Gaps = 82/222 (36%)
Query: 44 GGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKE 103
G ++ RVLCP KI VIGK G + I +++G I V+++
Sbjct: 120 GELVLRVLCPAGKIGLVIGKGGVTIKSIRKESGARIDVDDS------------------- 160
Query: 104 TSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLV 163
N REE+ + S+ +D+ +++ V+ LLL
Sbjct: 161 -------------KNDREESIITITSNEATDDA---------------KSAAVEAVLLL- 191
Query: 164 FERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI----------- 212
++++ D K +GCL+GKGG ++ +
Sbjct: 192 ---------QSKINDDNEGK-------------VIGCLIGKGGSIVNDMRSKTKAAIYIS 229
Query: 213 -DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRD 253
+ P A +SDE+V++ GEV+ +R AL I +L D+ RD
Sbjct: 230 KGEKPRKASSSDELVEVFGEVENLRDALVQIVLRLRDDVLRD 271
>gi|384253488|gb|EIE26963.1| hypothetical protein COCSUDRAFT_59455 [Coccomyxa subellipsoidea
C-169]
Length = 648
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 174/698 (24%), Positives = 281/698 (40%), Gaps = 167/698 (23%)
Query: 40 KSFPGGIM-FRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEAS 98
+S G ++ +R+LCP ++I VIGK G ++ Q+ TG I+VE V+G ERL+ + +S
Sbjct: 24 RSAAGAMVEYRLLCPATRIGTVIGKGGSVIQQMRDSTGARIKVEPEVAGCSERLISLSSS 83
Query: 99 DNKKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQK 158
D E + Q+
Sbjct: 84 DEPG------------------------------------------------AELCRAQE 95
Query: 159 ALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDK---- 214
AL V R+ E + A QE+T V+R+LV QVGC+LGKGG VI + +
Sbjct: 96 ALFAVQSRLSEAD-----AAQEDTCC---VVRMLVEQAQVGCVLGKGGEVISDLRRRTGA 147
Query: 215 ---------LPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPG------ 259
LP CA + D +V + GE V AL+ +S L +S R +
Sbjct: 148 NIRVSDKRDLPACAGSEDSLVAVKGEAQAVSDALRQLSALLRTHSQRKPQQARAPMTFNI 207
Query: 260 --------NPTGPSH---PLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLD 308
P H P+ + ++ P+ H + D H P S V++
Sbjct: 208 TAVATAAVQPEQAQHRRQPMREPVLAPIARPHQC-HNCLPDAHAMQPRMTAVQEASAVVE 266
Query: 309 RPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTE-------- 360
+ RLL +G VIG+ G +IR+++ +TG IKV E G
Sbjct: 267 --------VQLRLLVPATHIGCVIGRRGEMIRTIRDDTGAHIKVHEGSQGARAFPPSEKK 318
Query: 361 --DRLIVISGPAHPDDRISAPQDAVLRVQ--------------TRIARAIPDNREQTVMT 404
DR+I ++ +S ++AV + RI P ++
Sbjct: 319 GVDRVITVAAAEAAGAAVSPTEEAVCLMALCLLGPSGLPPVPCIRILVPTPQGGTAEALS 378
Query: 405 RLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRIL---GKD--QIPK--CASENEEVVLIN 457
L Q+G +LGKGG+ I ++RK SGA +R++ +D +P+ A + +VV I
Sbjct: 379 LL-----QVGGVLGKGGATITQVRKDSGAGVRLVPLEAEDDRWLPRDVAAGQMHKVVQIE 433
Query: 458 GEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFL-----DQVSPFPSFIGRRELSP 512
G A +A+ + +LR R R L + Q P + RE +
Sbjct: 434 GPITATVKAVRAVCAQLRAWQARSQGAQPARELTEAYGGAHAPQQFHPMHQAMLPRE-TA 492
Query: 513 PGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPHMP-DMKPWGPQGL 571
PG+ P + + + + + H RP + P D++ +G
Sbjct: 493 PGLRGRGLPDLSRAE-------------MGMYDSPLRHCERPVLQLRHPLDLQVLS-RGQ 538
Query: 572 MEVGGPMGFPDFVGPPHRRVPVVVPRSL-----------VPIIQGEDGACLKQIRQISDA 620
M+ M P + ++V V P V + G+ G + QIR+IS A
Sbjct: 539 MDRA--MSQPLMMQQVTQQV-VTAPDQTQSCELRLVGVQVGCVLGKAGENITQIRKISGA 595
Query: 621 KITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMS 658
++ ++D G TE ++ +SGT EQ AA +L+QAF+++
Sbjct: 596 RVKLSDAPRGVTERLLRLSGTCEQVQAAVNLVQAFLLA 633
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 109/178 (61%), Gaps = 1/178 (0%)
Query: 303 ESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDR 362
E+GV+ R + ++ +RLLC R+G VIGKGG++I+ ++ TG IKV V+G +R
Sbjct: 18 EAGVVKR-SAAGAMVEYRLLCPATRIGTVIGKGGSVIQQMRDSTGARIKVEPEVAGCSER 76
Query: 363 LIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGS 422
LI +S P + Q+A+ VQ+R++ A + + R+LV Q+GC+LGKGG
Sbjct: 77 LISLSSSDEPGAELCRAQEALFAVQSRLSEADAAQEDTCCVVRMLVEQAQVGCVLGKGGE 136
Query: 423 IIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFR 480
+I+++R+ +GA IR+ K +P CA + +V + GE +AV +AL Q++ LR H R
Sbjct: 137 VISDLRRRTGANIRVSDKRDLPACAGSEDSLVAVKGEAQAVSDALRQLSALLRTHSQR 194
>gi|388511497|gb|AFK43810.1| unknown [Lotus japonicus]
Length = 279
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 73/164 (44%), Positives = 110/164 (67%), Gaps = 1/164 (0%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
+ R++C +GGVIGKGGAII ++Q++G IKV + + +D LI IS DD
Sbjct: 14 FSVRVVCPTGNIGGVIGKGGAIINQIRQDSGATIKVDSSATEGDDCLIAISTKEFFDDSF 73
Query: 377 SAPQDAVLRVQTRIARAIP-DNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYI 435
S +A +R+Q R + + D+ + TRLLV S++IGCL+GKGG+II EMR+L+ A I
Sbjct: 74 SPTIEAAVRLQPRCSDKVERDSGIVSFTTRLLVPSSRIGCLIGKGGTIITEMRRLTKANI 133
Query: 436 RILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFF 479
RIL K+ +PK ASE++E+V I+G+ + ++AL Q+ TRL+ + F
Sbjct: 134 RILPKEDLPKIASEDDEMVQISGDLDVAKDALVQVLTRLKANLF 177
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 70/154 (45%), Gaps = 26/154 (16%)
Query: 163 VFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDK-------- 214
E V ++P + ++ F RLLV S+++GCL+GKGG +I ++ +
Sbjct: 76 TIEAAVRLQPRCSDKVERDSGIVSFTTRLLVPSSRIGCLIGKGGTIITEMRRLTKANIRI 135
Query: 215 -----LPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPG---------- 259
LP A DE+VQI+G++D + AL + +L N ++PG
Sbjct: 136 LPKEDLPKIASEDDEMVQISGDLDVAKDALVQVLTRLKANLFDKERAVPGFLPVMPYLPA 195
Query: 260 ---NPTGPSHPLPDHSVSSQGAPYATGHRDVADI 290
G ++ D +G Y++G+ ++D+
Sbjct: 196 SVDGSDGLNYDSRDGKRHGRGHSYSSGYGGLSDL 229
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 49 RVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKET-SEN 107
RV+CP I GVIGK G +++QI QD+G TI+V+ + + D+ L+ I + ++ S
Sbjct: 17 RVVCPTGNIGGVIGKGGAIINQIRQDSGATIKVDSSATEGDDCLIAISTKEFFDDSFSPT 76
Query: 108 LEASIE 113
+EA++
Sbjct: 77 IEAAVR 82
>gi|224077694|ref|XP_002305366.1| predicted protein [Populus trichocarpa]
gi|222848330|gb|EEE85877.1| predicted protein [Populus trichocarpa]
Length = 262
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 80/188 (42%), Positives = 116/188 (61%), Gaps = 2/188 (1%)
Query: 309 RPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
R + + + + R++C +G VIGKGG II ++QE+G IKV + S +D LI IS
Sbjct: 23 RDELASKEFSLRMVCPTANIGAVIGKGGTIINQIRQESGATIKVDSSASEGDDCLITISA 82
Query: 369 PAHPDDRISAPQDAVLRVQTRIARAIP-DNREQTVMTRLLVASNQIGCLLGKGGSIIAEM 427
DD+ S +A LR+Q R + + D+ + TRLLV S+ IGCLLGKGG II EM
Sbjct: 83 KEICDDQYSPTIEAALRLQPRCSEKMERDSGLFSFTTRLLVPSSHIGCLLGKGGLIIDEM 142
Query: 428 RKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFF-RDAFPSI 486
RKL+ A IRI KD++PK A +++E+V I+G+ + ++AL QI+ RLR + F R+ S
Sbjct: 143 RKLTKAIIRIPRKDKLPKTALDDDEMVQISGDLDIAKDALIQISRRLRANAFDREGLMSA 202
Query: 487 NRPLNPTF 494
P+ P
Sbjct: 203 ILPVFPYL 210
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 54/101 (53%), Gaps = 13/101 (12%)
Query: 163 VFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI---------- 212
E + ++P + ++ F RLLV S+ +GCLLGKGG +I ++
Sbjct: 93 TIEAALRLQPRCSEKMERDSGLFSFTTRLLVPSSHIGCLLGKGGLIIDEMRKLTKAIIRI 152
Query: 213 ---DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNS 250
DKLP AL DE+VQI+G++D + AL IS +L N+
Sbjct: 153 PRKDKLPKTALDDDEMVQISGDLDIAKDALIQISRRLRANA 193
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 48 FRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASD-NKKETSE 106
R++CP + I VIGK G +++QI Q++G TI+V+ + S D+ L+ I A + + S
Sbjct: 33 LRMVCPTANIGAVIGKGGTIINQIRQESGATIKVDSSASEGDDCLITISAKEICDDQYSP 92
Query: 107 NLEASI 112
+EA++
Sbjct: 93 TIEAAL 98
>gi|7486302|pir||T04533 hypothetical protein F28J12.30 - Arabidopsis thaliana
gi|2832642|emb|CAA16717.1| putative protein [Arabidopsis thaliana]
gi|7268630|emb|CAB78839.1| putative protein [Arabidopsis thaliana]
Length = 846
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 139/504 (27%), Positives = 220/504 (43%), Gaps = 127/504 (25%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
+++R+LCP+ + GVIGK G++++ I +T I+V + + G +R++ I S +K+
Sbjct: 344 VVYRILCPIDVVGGVIGKSGKVINAIRHNTKAKIKVFDQLHGCSQRVITIYCSVKEKQE- 402
Query: 106 ENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFE 165
E +SEN E A Q ALL V++
Sbjct: 403 ---EIGFTKSEN---EPLCCA------------------------------QDALLKVYD 426
Query: 166 RMVEVEPETEV---ADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI---------- 212
+V + E D+++ K RLLV +Q L+GK G IK+I
Sbjct: 427 AIVASDEENNTKTNVDRDDNKE----CRLLVPFSQSSSLIGKAGENIKRIRRRTRASVKV 482
Query: 213 ------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSH 266
D CA+ D VV I+GE ++V++AL +S + +PR E+IP + T
Sbjct: 483 VSKDVSDPSHVCAMEYDNVVVISGEPESVKQALFAVSAIMYKINPR--ENIPLDSTSQDV 540
Query: 267 PLPD--------HSVSSQGAPYAT------------------------GHRDVADIHLPM 294
P +SV Q Y+ G+ + A +P+
Sbjct: 541 PAASVIVPSDLSNSVYPQTGFYSNQDHILQQGAGVPSYFNALSVSDFQGYAETAANPVPV 600
Query: 295 -PPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVM 353
S+P H G R E L F++LC + VIGKGG+ I+ +++ +G I+V
Sbjct: 601 FASSLPVTHGFGGSSRS----EELVFKVLCPLCNIMRVIGKGGSTIKRIREASGSCIEVN 656
Query: 354 EA------------VSGTEDRLIVISGP----AHPDDRISAPQDAVLRVQTRIARAIPDN 397
++ V+ TE +S P PDD S +AVL +Q I D
Sbjct: 657 DSRTKCGDDECVIIVTATEILFCCLSTPFVFMQSPDDMKSMAVEAVLLLQ----EYINDE 712
Query: 398 REQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLIN 457
+ V +LLV+S IGC++GK GS+I E+RK + A I I + +++V ++
Sbjct: 713 DAENVKMQLLVSSKVIGCVIGKSGSVINEIRKRTNANICI--------SKGKKDDLVEVS 764
Query: 458 GEFEAVQEALFQITTRLRHHFFRD 481
GE +V++AL QI RLR D
Sbjct: 765 GEVSSVRDALIQIVLRLREDVLGD 788
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 155/362 (42%), Gaps = 64/362 (17%)
Query: 315 EILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAH--- 371
E++ +R+LC + VGGVIGK G +I +++ T IKV + + G R+I I
Sbjct: 342 ELVVYRILCPIDVVGGVIGKSGKVINAIRHNTKAKIKVFDQLHGCSQRVITIYCSVKEKQ 401
Query: 372 --------PDDRISAPQDAVLRVQTRIARAIPDNREQTVM-------TRLLVASNQIGCL 416
++ + QDA+L+V I + +N +T + RLLV +Q L
Sbjct: 402 EEIGFTKSENEPLCCAQDALLKVYDAIVASDEENNTKTNVDRDDNKECRLLVPFSQSSSL 461
Query: 417 LGKGGSIIAEMRKLSGAYIRILGKDQIP---KCASENEEVVLINGEFEAVQEALFQITTR 473
+GK G I +R+ + A ++++ KD CA E + VV+I+GE E+V++ALF ++
Sbjct: 462 IGKAGENIKRIRRRTRASVKVVSKDVSDPSHVCAMEYDNVVVISGEPESVKQALFAVSA- 520
Query: 474 LRHHFFRDAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPP 533
P N PL+ T Q P S I +LS +Y
Sbjct: 521 ----IMYKINPRENIPLDST--SQDVPAASVIVPSDLSNS-VY----------------- 556
Query: 534 PPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGG------------PMGFP 581
P F+ + DH + G+P + + QG E GF
Sbjct: 557 PQTGFYSNQDH--ILQ--QGAGVPSYFNALSVSDFQGYAETAANPVPVFASSLPVTHGFG 612
Query: 582 DFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDP--KPGATETVIIIS 639
V+ P + + G+ G+ +K+IR+ S + I + D K G E VII++
Sbjct: 613 GSSRSEELVFKVLCPLCNIMRVIGKGGSTIKRIREASGSCIEVNDSRTKCGDDECVIIVT 672
Query: 640 GT 641
T
Sbjct: 673 AT 674
>gi|4314357|gb|AAD15568.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 649
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 132/475 (27%), Positives = 213/475 (44%), Gaps = 89/475 (18%)
Query: 42 FPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNK 101
P RV+C S I G+IG +G ++S++ ++TG I E V+GSD +V I S
Sbjct: 21 LPDETAIRVVCHASVIGGIIGSNGYVVSKLRRETGTKIHCESPVNGSDHWVVFIVGS--- 77
Query: 102 KETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALL 161
T+ N SI ++ V + S + ED V E S Q AL+
Sbjct: 78 --TAVN--QSILLTDR-------VGEFSGGEHEDWVT------------CEVSAAQTALI 114
Query: 162 LVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKL------ 215
V ER V + + + + +L Q+G +LG GG ++ + +
Sbjct: 115 RVLERSWVVLAAKDGGGVVDGEDEEAYCGILADRNQIGAVLGLGGKNVEWMRRNSGAMIR 174
Query: 216 ----PTCALASDEVVQITGEVDTVRKALKLISHQLLDNSP----------RDHESIP--G 259
P C +DE++QITG+V V+KAL ++S + +N+P + +ES+ G
Sbjct: 175 VLPPPICGTKNDELIQITGDVLAVKKALVMVSSYIQNNAPLNGYPPPLSIKGYESLSTDG 234
Query: 260 NPTGP-SHPLPD--HSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEI 316
N P S P+ S S +R HLP D +
Sbjct: 235 NSEDPHSEFFPNLRSSSLSNATEIVASNR-----HLPY-------------DGGNSTERK 276
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
+ F+++ GG+IGK G IIR+L+ ETG I V + + +R++ +S + + R
Sbjct: 277 VVFKIIFTSVVAGGIIGKQGTIIRALQNETGASISVGAPLKVSGERVVTVSARENLESRY 336
Query: 377 SAPQDAVLRVQTRIARAIPDNREQ----------TVMTRLLVASNQIGCLLGKGG--SII 424
S Q+A+ V AR++ + E+ V T+LLV S+ G G +II
Sbjct: 337 SHAQNALALV---FARSVEIDVEKGLRPGLHNGAIVKTKLLVPSHFANSFNGNGNREAII 393
Query: 425 AEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFF 479
A +GA + I +Q+ + SENE V+ I GE+ VQ+AL ++++LR +
Sbjct: 394 A-----TGADVHISVGNQVLEWISENEVVIEIKGEYSHVQKALTHVSSKLRENLL 443
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 99/201 (49%), Gaps = 33/201 (16%)
Query: 314 PEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTE------------- 360
P+ R++CH +GG+IG G ++ L++ETG I V+G++
Sbjct: 22 PDETAIRVVCHASVIGGIIGSNGYVVSKLRRETGTKIHCESPVNGSDHWVVFIVGSTAVN 81
Query: 361 ------DRLIVISGPAHPDD---RISAPQDAVLRVQTRI--------ARAIPDNREQTVM 403
DR+ SG H D +SA Q A++RV R + D ++
Sbjct: 82 QSILLTDRVGEFSGGEHEDWVTCEVSAAQTALIRVLERSWVVLAAKDGGGVVDGEDEEAY 141
Query: 404 TRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAV 463
+L NQIG +LG GG + MR+ SGA IR+L P C ++N+E++ I G+ AV
Sbjct: 142 CGILADRNQIGAVLGLGGKNVEWMRRNSGAMIRVLPP---PICGTKNDELIQITGDVLAV 198
Query: 464 QEALFQITTRLRHHFFRDAFP 484
++AL +++ ++++ + +P
Sbjct: 199 KKALVMVSSYIQNNAPLNGYP 219
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 603 IQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
+ G DG + ++QIS A + + DP TE ++ISG PEQ A SLI++ + +
Sbjct: 595 LYGRDGTGVDNLQQISGANVDVKDPT--GTEATVLISGNPEQARTAMSLIESILTDQ 649
>gi|326530414|dbj|BAJ97633.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 580
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 126/231 (54%), Gaps = 26/231 (11%)
Query: 290 IHLPMPPSIPKF--HESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETG 347
+H+ PP +P + + L P P PE + R+LC E +G VIG+ GA +R ++Q+TG
Sbjct: 38 LHVDHPPPMPLLDPYRNRPLQYPVPEPEEFSIRILCASELIGPVIGRSGANVRQVEQQTG 97
Query: 348 CDIKVMEA-VSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPD-------NRE 399
I V E + +RLIVIS P D +S +A++ + ++++ + + E
Sbjct: 98 ARIVVQELHKDASGERLIVISSKEIPADPVSPTIEALILLHSKVSASKVSEPSESEPSGE 157
Query: 400 QTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGE 459
++TRL+V S ++GC+LG+GG +I EMR+ GA IR+ K PK S NEE+V ++G
Sbjct: 158 HKLVTRLVVPSKKVGCILGEGGKVITEMRRRIGAEIRVYSKADKPKYLSFNEELVQVSGS 217
Query: 460 FEAVQEALFQITTRLRHHFFRDA-----------FPS-----INRPLNPTF 494
+ +EAL +I +RLR RD FPS RP+NP +
Sbjct: 218 PDIAREALTEIASRLRDRILRDGISSFDGPPADIFPSREFTQYGRPVNPPY 268
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 94/225 (41%), Gaps = 63/225 (28%)
Query: 43 PGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEET-VSGSDERLVVIEASDNK 101
P R+LC I VIG+ G + Q+ Q TG I V+E S ERL+VI + K
Sbjct: 64 PEEFSIRILCASELIGPVIGRSGANVRQVEQQTGARIVVQELHKDASGERLIVISS---K 120
Query: 102 KETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALL 161
+ ++ + +IE AL+
Sbjct: 121 EIPADPVSPTIE---------------------------------------------ALI 135
Query: 162 LVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKL------ 215
L+ + V +E ++ E + K V RL+V S +VGC+LG+GG VI ++ +
Sbjct: 136 LLHSK-VSASKVSEPSESEPSGEHKLVTRLVVPSKKVGCILGEGGKVITEMRRRIGAEIR 194
Query: 216 -------PTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRD 253
P ++E+VQ++G D R+AL I+ +L D RD
Sbjct: 195 VYSKADKPKYLSFNEELVQVSGSPDIAREALTEIASRLRDRILRD 239
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 47/82 (57%)
Query: 582 DFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGT 641
D G V + +P S + + G G L +IRQIS A++ + + +PG++E+++ I G
Sbjct: 485 DVTGYSSSSVELRIPNSSLESVVGAGGVNLAEIRQISGARMKLLEARPGSSESIMEIQGM 544
Query: 642 PEQTHAAQSLIQAFVMSETETT 663
Q AQSL+Q F+ + +++
Sbjct: 545 AHQVRVAQSLLQGFIGANSQSA 566
>gi|308080276|ref|NP_001183239.1| hypothetical protein [Zea mays]
gi|238010240|gb|ACR36155.1| unknown [Zea mays]
gi|414884425|tpg|DAA60439.1| TPA: hypothetical protein ZEAMMB73_126154 [Zea mays]
Length = 647
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 91/271 (33%), Positives = 128/271 (47%), Gaps = 21/271 (7%)
Query: 223 DEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPL-------PDHSVSS 275
+EVV+ITG+ VRKAL +S L + P + + G P P+ S
Sbjct: 186 EEVVEITGDRTAVRKALVALSSFLQGDLPIGNSTTYVKKEGSILPWASSEVPGPNMGASC 245
Query: 276 QGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKG 335
A VA H P E D + + ++FRLL GG+IGK
Sbjct: 246 SEASTEFAQGSVAKTHCP---------EGNTGDAQSKTLQQVSFRLLLPTYLAGGLIGKK 296
Query: 336 GAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIP 395
G II+ ++ ETG I V V+G ++R+I I PD Q A+L + R+
Sbjct: 297 GLIIKGIEVETGACIDVGAPVAGCKERVITICALESPDSEYHIVQSALLLIFDRMMEMET 356
Query: 396 DN-----REQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASEN 450
+ + + R+LV NQ GCL+G GGSII EM +GA I+IL +IP CAS
Sbjct: 357 NTHSTFEKASQFLVRVLVLKNQFGCLVGLGGSIIKEMVNTTGARIQILDDTEIPACASTF 416
Query: 451 EEVVLINGEFEAVQEALFQITTRLRHHFFRD 481
E VV I GE ++ AL + +LR+H F +
Sbjct: 417 ELVVQITGELMNIRNALSLVFWKLRNHIFSN 447
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 115/259 (44%), Gaps = 65/259 (25%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
+ FR+L P G+IGK G ++ I +TG I V V+G ER++ I A ++
Sbjct: 278 VSFRLLLPTYLAGGLIGKKGLIIKGIEVETGACIDVGAPVAGCKERVITICALESP---- 333
Query: 106 ENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFE 165
+ E VQ ALLL+F+
Sbjct: 334 --------------------------------------------DSEYHIVQSALLLIFD 349
Query: 166 RMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI------------- 212
RM+E+E T + K+S+F++R+LVL Q GCL+G GG +IK++
Sbjct: 350 RMMEMETNTHSTFE---KASQFLVRVLVLKNQFGCLVGLGGSIIKEMVNTTGARIQILDD 406
Query: 213 DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHS 272
++P CA + VVQITGE+ +R AL L+ + L N +E+ N S + + +
Sbjct: 407 TEIPACASTFELVVQITGELMNIRNALSLVFWK-LRNHIFSNETDYNNSHISSSEIAESN 465
Query: 273 VSSQGAPYATGHRDVADIH 291
+SQ Y+T V + H
Sbjct: 466 ATSQANIYSTIQYSVDNGH 484
>gi|255557235|ref|XP_002519648.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223541065|gb|EEF42621.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 462
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 113/364 (31%), Positives = 172/364 (47%), Gaps = 40/364 (10%)
Query: 304 SGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVM--------EA 355
S VLD + + R+L + +IGK G I+ L+ +T IKV +
Sbjct: 129 SSVLDSDRKMKDKEECRILVPSSQSANIIGKAGTTIKKLRSKTRATIKVTPKDASDPTHS 188
Query: 356 VSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGC 415
+ D I+ PDD S +A+L +Q +I D + TV RLLV IGC
Sbjct: 189 CAMDFDNFIM-----SPDDLKSMAVEAILLLQGKIN----DEDDDTVSIRLLVPCKVIGC 239
Query: 416 LLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLR 475
++GK GSII E+R+ + A IRI K Q PKCA ++E+V + GE +V++AL QI RLR
Sbjct: 240 IIGKSGSIINEIRRRTKADIRI-SKGQKPKCADSSDELVEVLGEVGSVRDALVQIVLRLR 298
Query: 476 HHFFRDAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPP 535
DA + NP+ V P + G +S P + S+ P P
Sbjct: 299 D----DALKEKDGSHNPS----VGADPLYSGGSGISVPSLLSSVPPV-----------TP 339
Query: 536 GSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVG-PPHRRVPVV 594
++ + + + + + + G G + + G PP + ++
Sbjct: 340 LAYDQRPETGSGLGLLSSSNLYGYGS--LTMGDNGYDSMSSYSSSKLYGGLPPPSTLEML 397
Query: 595 VPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQA 654
VP + V + G+ GA + IR+IS A I I+D K + + ISGTPEQ AA++LIQA
Sbjct: 398 VPANAVGKVLGKGGANIANIRKISGAMIEISDAKSARGDRIAHISGTPEQKRAAENLIQA 457
Query: 655 FVMS 658
F+M+
Sbjct: 458 FIMA 461
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 78/148 (52%), Gaps = 24/148 (16%)
Query: 315 EILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVI-------- 366
E++ +R+LC DE +G VIGK G +I S++QET +KV++ G DR+I I
Sbjct: 37 ELVAYRILCPDEVIGSVIGKNGKVINSIRQETRAKVKVVDPFPGPNDRVITIYCYVKKKE 96
Query: 367 ----SGPAHPDDRISAPQDAVLRVQTRIARAIPD---------NREQTVMTRLLVASNQI 413
H A QDA+LRV + I+ A+ ++E+ R+LV S+Q
Sbjct: 97 DVELDDEFHDHQPFCAAQDALLRVHSAISNAVSSVLDSDRKMKDKEE---CRILVPSSQS 153
Query: 414 GCLLGKGGSIIAEMRKLSGAYIRILGKD 441
++GK G+ I ++R + A I++ KD
Sbjct: 154 ANIIGKAGTTIKKLRSKTRATIKVTPKD 181
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 97/223 (43%), Gaps = 50/223 (22%)
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQIDKL------------PTCALASDEVVQITGEVDTVR 236
+RLLV +GC++GK G +I +I + P CA +SDE+V++ GEV +VR
Sbjct: 228 IRLLVPCKVIGCIIGKSGSIINEIRRRTKADIRISKGQKPKCADSSDELVEVLGEVGSVR 287
Query: 237 KALKLISHQLLDNSPRDHESIPGNPTGPSHPL-----------------PDHSVSSQGAP 279
AL I +L D++ ++ + NP+ + PL P ++ P
Sbjct: 288 DALVQIVLRLRDDALKEKDG-SHNPSVGADPLYSGGSGISVPSLLSSVPPVTPLAYDQRP 346
Query: 280 --------------YATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHD 325
Y G + D S G L P PS T +L
Sbjct: 347 ETGSGLGLLSSSNLYGYGSLTMGDNGYDSMSSYSSSKLYGGL--PPPS----TLEMLVPA 400
Query: 326 ERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
VG V+GKGGA I ++++ +G I++ +A S DR+ ISG
Sbjct: 401 NAVGKVLGKGGANIANIRKISGAMIEISDAKSARGDRIAHISG 443
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 68/167 (40%), Gaps = 38/167 (22%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
+ +R+LCP I VIGK+G++++ I Q+T ++V + G ++R++ I KKE
Sbjct: 39 VAYRILCPDEVIGSVIGKNGKVINSIRQETRAKVKVVDPFPGPNDRVITIYCYVKKKEDV 98
Query: 106 ENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFE 165
E L D + + Q ALL V
Sbjct: 99 E------------------------------------LDDEFHDHQPFCAAQDALLRVHS 122
Query: 166 RMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI 212
+ + V D + K R+LV S+Q ++GK G IK++
Sbjct: 123 AISNA--VSSVLDSDRKMKDKEECRILVPSSQSANIIGKAGTTIKKL 167
>gi|118485588|gb|ABK94645.1| unknown [Populus trichocarpa]
Length = 294
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 73/164 (44%), Positives = 106/164 (64%), Gaps = 2/164 (1%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
+ R++C +G VIGKGG II ++QE+G IKV +V+ +D LI IS D
Sbjct: 31 FSLRVVCPTANIGAVIGKGGTIINQIRQESGATIKVDSSVAEGDDCLITISAK-EIYDHY 89
Query: 377 SAPQDAVLRVQTRIARAIP-DNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYI 435
S +A +R+Q R + + D+ + TRLLV S++IGCLLGKGG+II EMRKL+ A I
Sbjct: 90 SPTIEAAVRLQPRCSEKMERDSGLISFTTRLLVPSSRIGCLLGKGGAIIDEMRKLTKAII 149
Query: 436 RILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFF 479
RI K+ +PK AS+++E+V I G+ + ++AL QI+ RLR + F
Sbjct: 150 RIPRKENLPKVASDDDEMVQIAGDLDVAKDALIQISRRLRANVF 193
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 13/100 (13%)
Query: 163 VFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDK-------- 214
E V ++P + ++ F RLLV S+++GCLLGKGG +I ++ K
Sbjct: 92 TIEAAVRLQPRCSEKMERDSGLISFTTRLLVPSSRIGCLLGKGGAIIDEMRKLTKAIIRI 151
Query: 215 -----LPTCALASDEVVQITGEVDTVRKALKLISHQLLDN 249
LP A DE+VQI G++D + AL IS +L N
Sbjct: 152 PRKENLPKVASDDDEMVQIAGDLDVAKDALIQISRRLRAN 191
>gi|116787223|gb|ABK24418.1| unknown [Picea sitchensis]
gi|224286491|gb|ACN40952.1| unknown [Picea sitchensis]
Length = 481
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 111/382 (29%), Positives = 170/382 (44%), Gaps = 55/382 (14%)
Query: 304 SGVLDRPKPS-PEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDR 362
+G+ D+ P P FRLL + VGG+IG+ G ++ + +ET IK++E + GT +R
Sbjct: 71 AGLTDKKWPGWPGDNVFRLLVPTQMVGGIIGRKGEFVKKMCEETRSRIKILEGLRGTPER 130
Query: 363 LIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQ----------TVMTRLLVASNQ 412
+++S P+ +S D +LRV RI PD R + T+ TRLLVA Q
Sbjct: 131 TVMVSAKEEPEAPVSPAMDGILRVHKRIIEGGPDGRGELGRAQQGGSGTISTRLLVAGTQ 190
Query: 413 IGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITT 472
G L+G+ G+ I +++ SGA +R+L + +P CA ++ +V + GE +V +A+ I +
Sbjct: 191 AGSLIGRQGATIKAIQEGSGAIVRVLAAEDLPFCALADDRLVEVQGEAGSVHKAVELIVS 250
Query: 473 RLRHHFFRDAFPSINRPLNPTFLDQVSPFPSFIGRREL-SPPGMYSNFGPSFHKFDAVGG 531
LR FL S P F R + + P + N +
Sbjct: 251 HLRK-----------------FLVDRSVLPLFEADRTIGNQPQIEENLPHQSWGHNQSSS 293
Query: 532 PPPPGSFHPHDDH---SAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVG--- 585
P G + SAF H + P P +P ++ G GL G P G
Sbjct: 294 VPSSGGAGLGNTQYMSSAFQHDNYYP--PSDLP-LESQGHHGLSVYGRD---PSLAGHSV 347
Query: 586 ---PPHRRVPVV--------VPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATET 634
PP PV+ +P S I G GA + +R+ S A I + + + E
Sbjct: 348 ANPPP---APVITQVTQHMQIPLSYADAIIGTAGANISYMRRNSGATIAVQETRGVPGEM 404
Query: 635 VIIISGTPEQTHAAQSLIQAFV 656
+ I GT Q AQ LIQ F+
Sbjct: 405 TVEIRGTATQVQTAQQLIQNFM 426
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 140/364 (38%), Gaps = 99/364 (27%)
Query: 42 FPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNK 101
+PG +FR+L P + G+IG+ GE + ++ ++T I++ E + G+ ER V++ A
Sbjct: 81 WPGDNVFRLLVPTQMVGGIIGRKGEFVKKMCEETRSRIKILEGLRGTPERTVMVSAK--- 137
Query: 102 KETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALL 161
E EA + S MDG+ L
Sbjct: 138 ----EEPEAPV----------------------------SPAMDGI-------------L 152
Query: 162 LVFERMVEVEPET--EVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI------- 212
V +R++E P+ E+ + S RLLV TQ G L+G+ G IK I
Sbjct: 153 RVHKRIIEGGPDGRGELGRAQQGGSGTISTRLLVAGTQAGSLIGRQGATIKAIQEGSGAI 212
Query: 213 ------DKLPTCALASDEVVQITGEVDTVRKALKLISHQL------------------LD 248
+ LP CALA D +V++ GE +V KA++LI L +
Sbjct: 213 VRVLAAEDLPFCALADDRLVEVQGEAGSVHKAVELIVSHLRKFLVDRSVLPLFEADRTIG 272
Query: 249 NSPRDHESIPGNPTG--PSHPLPDHSVSSQGAPYATGHRDVADIHLP---MPPSIPKFHE 303
N P+ E++P G S +P + G D + P +P H
Sbjct: 273 NQPQIEENLPHQSWGHNQSSSVPSSGGAGLGNTQYMSSAFQHDNYYPPSDLPLESQGHHG 332
Query: 304 SGVLDR-----------PKPSPEI--LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDI 350
V R P P+P I +T + +IG GA I +++ +G I
Sbjct: 333 LSVYGRDPSLAGHSVANPPPAPVITQVTQHMQIPLSYADAIIGTAGANISYMRRNSGATI 392
Query: 351 KVME 354
V E
Sbjct: 393 AVQE 396
>gi|297740744|emb|CBI30926.3| unnamed protein product [Vitis vinifera]
Length = 435
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/285 (32%), Positives = 143/285 (50%), Gaps = 36/285 (12%)
Query: 223 DEVVQITGEVDTVRKALKLISHQLLDNSPRDH-----------------ESIPGNPTGPS 265
D V I G+ + V+KAL IS + +PR+ +P P G
Sbjct: 4 DNFVLIAGDSEAVKKALFAISAIMYKFTPREEIPLDTTVPEAPPSIIIPSDVPIYPAGGF 63
Query: 266 HPLPDHSVSSQGAP---YAT------GHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEI 316
+P D VS++ P AT G+ D+ ++P G E
Sbjct: 64 YPSADSIVSARSVPPVLAATHVPELQGYSDMGSTWPVYSSNLPVVSGYGA-----SRSEE 118
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
L R+LC +++G VIG+GG+ I+S+++ +G ++V + + ++ LI ++ DD
Sbjct: 119 LIIRVLCPFDKIGRVIGRGGSSIKSVREASGAHVEVDDTKADRDECLITVTSTESVDDLK 178
Query: 377 SAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIR 436
S +AVL +Q +I D + TV RLLV S IGC++GK GSII E+RK + A +R
Sbjct: 179 SMAVEAVLLLQAKIN----DEDDDTVAIRLLVPSKIIGCIIGKSGSIINEIRKRTRADVR 234
Query: 437 ILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRD 481
I K + PKCA N+E++ + GE +V++AL QI RLR +D
Sbjct: 235 I-SKSERPKCADANDELIEVVGEVGSVRDALVQIVLRLRDDALKD 278
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 94/389 (24%), Positives = 158/389 (40%), Gaps = 126/389 (32%)
Query: 33 YSENQPSKSFPGG-----IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSG 87
YS N P S G ++ RVLCP KI VIG+ G + + + +G + V++T +
Sbjct: 101 YSSNLPVVSGYGASRSEELIIRVLCPFDKIGRVIGRGGSSIKSVREASGAHVEVDDTKAD 160
Query: 88 SDERLVVIEASDNKKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGL 147
DE L+ + ++++ +D L
Sbjct: 161 RDECLITVTSTES-------------------------------------------VDDL 177
Query: 148 NSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGC 207
S V+ LLL + ++ D+++ +RLLV S +GC++GK G
Sbjct: 178 KSMA----VEAVLLL----------QAKINDEDD---DTVAIRLLVPSKIIGCIIGKSGS 220
Query: 208 VIKQIDKL------------PTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHE 255
+I +I K P CA A+DE++++ GEV +VR AL I +L D++ +D +
Sbjct: 221 IINEIRKRTRADVRISKSERPKCADANDELIEVVGEVGSVRDALVQIVLRLRDDALKDRD 280
Query: 256 SIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHE------------ 303
TG + S+ S GA + V+ + PP P ++
Sbjct: 281 ------TGHNTSAGTDSLYSGGAGLS-----VSSVLPSAPPVAPLSYDQRAETGSGLGLL 329
Query: 304 ------------------------SGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAII 339
S L P+P TF ++ VG V+GKGGA I
Sbjct: 330 SSSSLYGYGSLSVGENAYGSMSSYSSKLYGGLPTPS--TFDMVIPANAVGKVMGKGGANI 387
Query: 340 RSLKQETGCDIKVMEAVSGTEDRLIVISG 368
++++ +G I++ ++ S DR+ +ISG
Sbjct: 388 ANIRKISGAVIEISDSKSSRGDRVALISG 416
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 44/66 (66%)
Query: 593 VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLI 652
+V+P + V + G+ GA + IR+IS A I I+D K + V +ISGTPEQ A++LI
Sbjct: 369 MVIPANAVGKVMGKGGANIANIRKISGAVIEISDSKSSRGDRVALISGTPEQKRTAENLI 428
Query: 653 QAFVMS 658
QAF+M+
Sbjct: 429 QAFIMA 434
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 79/214 (36%), Gaps = 33/214 (15%)
Query: 449 ENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSPFPSFIGRR 508
E + VLI G+ EAV++ALF I+ + R+ P LD P
Sbjct: 2 EFDNFVLIAGDSEAVKKALFAISAIMYKFTPREEIP----------LDTTVP-------- 43
Query: 509 ELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGP 568
E P + + P + P G F+P D + H+P+++ +
Sbjct: 44 EAPPSIIIPSDVPIY----------PAGGFYPSADSIVSARSVPPVLAATHVPELQGYSD 93
Query: 569 QGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPI-----IQGEDGACLKQIRQISDAKIT 623
G P G R ++ R L P + G G+ +K +R+ S A +
Sbjct: 94 MGSTWPVYSSNLPVVSGYGASRSEELIIRVLCPFDKIGRVIGRGGSSIKSVREASGAHVE 153
Query: 624 ITDPKPGATETVIIISGTPEQTHAAQSLIQAFVM 657
+ D K E +I ++ T ++A ++
Sbjct: 154 VDDTKADRDECLITVTSTESVDDLKSMAVEAVLL 187
>gi|148907101|gb|ABR16694.1| unknown [Picea sitchensis]
Length = 490
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 166/353 (47%), Gaps = 33/353 (9%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISA 378
FR+L ++VGG+IG+ G ++ + +ET IK+++ +SGT +R++++S PD IS
Sbjct: 52 FRMLVPSQKVGGIIGRKGEFVKKMCEETRSRIKILDGLSGTPERVVMVSAKEEPDATISP 111
Query: 379 PQDAVLRVQTRIARAIPD-NREQTV-----MTRLLVASNQIGCLLGKGGSIIAEMRKLSG 432
D +L+V RI I + R Q +TRLL+A Q G L+GK G+ I +++ SG
Sbjct: 112 AMDGILKVHKRIIEGIDEVGRTQQAAGGPTITRLLLAGIQSGSLIGKQGATIKSIQENSG 171
Query: 433 AYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFF-RDAFPSINRPLN 491
+++G + IP CA +++V+ I GE V +AL + + LR R P ++
Sbjct: 172 VAAKVVGSEDIPYCALADDKVLEIQGEPANVHKALELVVSHLRKFLVDRSVLPMYEMNMS 231
Query: 492 PTFLDQVSPFPS---FIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFM 548
T Q+ S + + S P S FG + K+ P P PHD++ A
Sbjct: 232 KTNQSQMEQNLSHQPWSHNQTSSLPNSGSGFG-NNSKYT----PTAP----PHDNYYAPS 282
Query: 549 HHIHRPGMPP-----HMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPII 603
+PP H +M P G V P R + +P S +
Sbjct: 283 D------LPPETHSHHGLNMYGRDPLGGHSVPNAAPAPVITQVSQR---MQIPLSYADAV 333
Query: 604 QGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFV 656
G +GA + R+ S A ITI + + E + I GT Q AQ LIQ F+
Sbjct: 334 IGTNGANISYCRRNSGAIITIEETRGVPGEMTVEIHGTASQVQTAQQLIQNFM 386
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 97/218 (44%), Gaps = 63/218 (28%)
Query: 42 FPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNK 101
+PG +FR+L P K+ G+IG+ GE + ++ ++T I++ + +SG+ ER+V++ A
Sbjct: 46 WPGENVFRMLVPSQKVGGIIGRKGEFVKKMCEETRSRIKILDGLSGTPERVVMVSAK--- 102
Query: 102 KETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALL 161
E +A+I S MDG+ L
Sbjct: 103 ----EEPDATI----------------------------SPAMDGI-------------L 117
Query: 162 LVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI--------- 212
V +R++E EV + + RLL+ Q G L+GK G IK I
Sbjct: 118 KVHKRIIE--GIDEVGRTQQAAGGPTITRLLLAGIQSGSLIGKQGATIKSIQENSGVAAK 175
Query: 213 ----DKLPTCALASDEVVQITGEVDTVRKALKLISHQL 246
+ +P CALA D+V++I GE V KAL+L+ L
Sbjct: 176 VVGSEDIPYCALADDKVLEIQGEPANVHKALELVVSHL 213
>gi|169647179|gb|ACA61608.1| hypothetical protein AP1_E07.1 [Arabidopsis lyrata subsp. petraea]
Length = 532
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 106/336 (31%), Positives = 168/336 (50%), Gaps = 47/336 (13%)
Query: 32 DYSENQPSKSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETV-SGSDE 90
++S ++ + + FR+LCP S+ +IGK G ++ + TG IRV + + S+E
Sbjct: 228 EFSSSKRPATAAESVHFRLLCPASRTGAIIGKGGSVIRHLQSVTGSKIRVIDDIPVPSEE 287
Query: 91 RLVVIEASDNKKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSE 150
R+V+I A KK+ N + SEN EE +++ S G+ G + E
Sbjct: 288 RVVLIIAPSGKKKDDSN----VFDSENPSSEEP-------KQEKGSECAGT---SGGDDE 333
Query: 151 KETSKVQKALLLVFERMVEVEPETEV-ADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVI 209
+ S Q ALL V ER+V + V D + S+ + R++V QV L+ KGG +I
Sbjct: 334 EAPSSAQMALLRVLERIVFGDDAASVDGDGLDKGESESLCRMIVRGNQVDFLMSKGGKMI 393
Query: 210 KQI-------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDN-SPRDHE 255
++I D++P CA D V+QITG+ +V+KAL LI++ L ++ +P +
Sbjct: 394 QRIREDSGAIVRISSTDQIPPCAFPGDVVIQITGKFSSVKKALLLITNCLQESGAPPTWD 453
Query: 256 SIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPE 315
P P +P HS+ H PMP + F+ RP E
Sbjct: 454 ECPF--PQPGYPPDYHSMEY--------HPQWDHPPNPMPEDVVPFN------RPVVEEE 497
Query: 316 ILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIK 351
+ +FRLLC ++VG +IGKGGA++R+L+ E+G IK
Sbjct: 498 V-SFRLLCPADKVGSLIGKGGAVVRALQNESGASIK 532
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 106/212 (50%), Gaps = 44/212 (20%)
Query: 309 RPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAV-SGTEDRLIVI- 366
RP + E + FRLLC R G +IGKGG++IR L+ TG I+V++ + +E+R+++I
Sbjct: 234 RPATAAESVHFRLLCPASRTGAIIGKGGSVIRHLQSVTGSKIRVIDDIPVPSEERVVLII 293
Query: 367 --SGPAHPDDRI-------------------------------SAPQDAVLRVQTRI--- 390
SG D + S+ Q A+LRV RI
Sbjct: 294 APSGKKKDDSNVFDSENPSSEEPKQEKGSECAGTSGGDDEEAPSSAQMALLRVLERIVFG 353
Query: 391 --ARAIP----DNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIP 444
A ++ D E + R++V NQ+ L+ KGG +I +R+ SGA +RI DQIP
Sbjct: 354 DDAASVDGDGLDKGESESLCRMIVRGNQVDFLMSKGGKMIQRIREDSGAIVRISSTDQIP 413
Query: 445 KCASENEEVVLINGEFEAVQEALFQITTRLRH 476
CA + V+ I G+F +V++AL IT L+
Sbjct: 414 PCAFPGDVVIQITGKFSSVKKALLLITNCLQE 445
>gi|224115590|ref|XP_002332094.1| predicted protein [Populus trichocarpa]
gi|222874914|gb|EEF12045.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 107/374 (28%), Positives = 166/374 (44%), Gaps = 55/374 (14%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISA 378
FRL+ +VG +IG+ G +++ + ET I+++E G DR+++ISG P+ +S
Sbjct: 55 FRLIVPVSKVGSIIGRKGELVKKMCDETRARIRILEGPLGITDRIVLISGKEEPEAPLSP 114
Query: 379 PQDAVLRVQTRIARAIPDNREQTVMT-------------RLLVASNQIGCLLGKGGSIIA 425
DAVLRV R++ P + T RLLVAS+Q L+GK GSII
Sbjct: 115 AMDAVLRVFKRVSGLSPGEGDNTGSAAAAAAAGSAFCSIRLLVASSQAINLIGKQGSIIK 174
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFF-RDAFP 484
+++ +G +R++ +D IP A+ +E +V I+GE V +AL + LR P
Sbjct: 175 SIQENTGVVVRVMAEDDIPTYATSDERIVEIHGEAMKVFKALEAVIGHLRKFLVDHSVIP 234
Query: 485 SINRPLNPTF---------LDQVSP----FPSFIGRRELSPPGMYSNFGPSFHKFDAVGG 531
+ N T D P P+F G+ S++ S +
Sbjct: 235 IFEKTYNATISLERPADACADNAQPSLHSAPAF-------SSGIISDYSLSLKR------ 281
Query: 532 PPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRV 591
S + H+ H F H I +PG +G GL+ + G P +V
Sbjct: 282 ---DPSIYEHETH--FEHKISQPG-------FSLYGDPGLVGLRS-TGLGRATAPIVTQV 328
Query: 592 --PVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQ 649
+ VP S I G G+ + IR+ S A ++I + + E + I GT Q AQ
Sbjct: 329 TQTMQVPLSYAEDIIGVAGSNIAYIRRTSGAILSIQESRGLPDEITVEIKGTSSQVQMAQ 388
Query: 650 SLIQAFVMSETETT 663
LIQ F+ + E T
Sbjct: 389 QLIQEFISNHKEPT 402
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 100/236 (42%), Gaps = 69/236 (29%)
Query: 42 FPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNK 101
+PG +FR++ PVSK+ +IG+ GE++ ++ +T IR+ E G +R+V+I
Sbjct: 49 WPGDNVFRLIVPVSKVGSIIGRKGELVKKMCDETRARIRILEGPLGITDRIVLI------ 102
Query: 102 KETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALL 161
+G+EE E S A+L
Sbjct: 103 ----------------SGKEEP--------------------------EAPLSPAMDAVL 120
Query: 162 LVFERMVEVEP----ETEVADQENTKSSKFV-LRLLVLSTQVGCLLGKGGCVIKQI---- 212
VF+R+ + P T A S F +RLLV S+Q L+GK G +IK I
Sbjct: 121 RVFKRVSGLSPGEGDNTGSAAAAAAAGSAFCSIRLLVASSQAINLIGKQGSIIKSIQENT 180
Query: 213 ---------DKLPTCALASDEVVQITGEVDTVRKALK-LISHQLLDNSPRDHESIP 258
D +PT A + + +V+I GE V KAL+ +I H L DH IP
Sbjct: 181 GVVVRVMAEDDIPTYATSDERIVEIHGEAMKVFKALEAVIGH--LRKFLVDHSVIP 234
>gi|297833144|ref|XP_002884454.1| hypothetical protein ARALYDRAFT_477721 [Arabidopsis lyrata subsp.
lyrata]
gi|297330294|gb|EFH60713.1| hypothetical protein ARALYDRAFT_477721 [Arabidopsis lyrata subsp.
lyrata]
Length = 568
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 163/352 (46%), Gaps = 29/352 (8%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISA 378
FR+L ++VG +IG+ G +I+ + +ET IK+++ GT +R +++SG P+ +
Sbjct: 180 FRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSGKEEPESSLPP 239
Query: 379 PQDAVLRVQTRIARAIPDNREQT-----VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
D +LRV RI + Q V TRLLV ++Q G L+GK G + +++ S
Sbjct: 240 SMDGLLRVHMRIVDGLDGEPSQAPPASKVSTRLLVPASQAGSLIGKQGGTVKAIQEASAC 299
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPT 493
+R+LG + +P A +++ VV + GE +V +AL I + LR ++R + P
Sbjct: 300 IVRVLGSEDLPVFALQDDRVVEVVGEPTSVHKALELIASHLRKFL-------VDRSIIPF 352
Query: 494 FLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHR 553
F +Q+ P+ R+ P + +GP +VGG G + + H
Sbjct: 353 FENQMQK-PT---RQMDHMPAPHQAWGPPQGHAPSVGG----GGYGHNPPPYMQPPPRHD 404
Query: 554 PGMPP---HMPDMKPWGPQGLMEVGG--PMGFPDFVGPPHRRVPVV----VPRSLVPIIQ 604
PP P M+ QG+ G PM PP V +P S +
Sbjct: 405 SYYPPPEMRQPPMEKQPHQGISAYGREPPMNVHVSSAPPMVAQQVTQQMQIPLSYADAVI 464
Query: 605 GEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFV 656
G G+ + R++S A +TI + + E + +SGT Q A LIQ F+
Sbjct: 465 GTSGSNISYTRRLSGATVTIQETRGVPGEMTVEVSGTGSQVQTAMQLIQNFM 516
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 108/250 (43%), Gaps = 70/250 (28%)
Query: 13 DDDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQIS 72
D++ +E K +S++ A E + +PG +FR+L P K+ +IG+ G+++ +I
Sbjct: 145 DEEGISESLQKSESEEGATVGGEEKRWPGWPGETVFRMLVPAQKVGSIIGRKGDVIKKIV 204
Query: 73 QDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASVADESDNK 132
++T I++ + G+ ER V++ K+E +L S
Sbjct: 205 EETRARIKILDGPPGTTERAVMV---SGKEEPESSLPPS--------------------- 240
Query: 133 KEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMV---EVEPETEVADQENTKSSKFVL 189
MDG LL V R+V + EP + +SK
Sbjct: 241 -----------MDG-------------LLRVHMRIVDGLDGEPS------QAPPASKVST 270
Query: 190 RLLVLSTQVGCLLGKGGCVIKQI-------------DKLPTCALASDEVVQITGEVDTVR 236
RLLV ++Q G L+GK G +K I + LP AL D VV++ GE +V
Sbjct: 271 RLLVPASQAGSLIGKQGGTVKAIQEASACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVH 330
Query: 237 KALKLISHQL 246
KAL+LI+ L
Sbjct: 331 KALELIASHL 340
>gi|148909250|gb|ABR17725.1| unknown [Picea sitchensis]
Length = 435
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 107/382 (28%), Positives = 184/382 (48%), Gaps = 58/382 (15%)
Query: 312 PSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVI-SGPA 370
P + +R+LC +G VIGKGG +I+S++QET I+V +AV G ++R+IVI S P
Sbjct: 37 PGADSTVYRILCPSNVIGSVIGKGGKVIKSMRQETRSKIRVADAVPGVDERVIVIFSSPL 96
Query: 371 HPDDR------------ISAPQDAVLRVQTRIAR--AIPDN---REQTVMTRLLVASNQI 413
D + QD +LRV + I + + DN +++ RLLVA++QI
Sbjct: 97 SKDKEKDDDDDDNENEPVCPAQDGLLRVHSVIVQESSGKDNDADKKRPQDARLLVANSQI 156
Query: 414 GCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTR 473
G L+GKGG+ I ++R SGA I+I KD++P CA +E+V+I+G+ AV++AL+ ++
Sbjct: 157 GSLIGKGGNNIQKLRSESGAQIQIPRKDELPGCAFSFDELVVISGDAAAVKKALYAVSAF 216
Query: 474 LRHHFFRDAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPP 533
L H ++ P L + + + L P G+ P+F
Sbjct: 217 LFKHPPKEQIPW------SVILPETN-------QSSLPPSGV-----PTF---------- 248
Query: 534 PPGSFHPHDDHSAFMHHIHRP--GMPPHMPDMKPWGPQG--LMEVGGPM--GFPDFVGPP 587
PP ++ P D H++ P G +P + +G + + P F F
Sbjct: 249 PPANYLPQGDSLFGHHNLSAPILGYASRLPGLGGYGSEAGSAWPLSNPALPSFSKFGNST 308
Query: 588 HRR------VPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGT 641
++ + V+ P + + G+ G +K +R + A I + D + + E VI++S T
Sbjct: 309 TKKTSEEFSIRVLCPNDKIGGVIGKGGNTIKSMRNDTGASIRVEDAQTESDERVIVVSAT 368
Query: 642 PEQTHAAQSLIQAFVMSETETT 663
I+A ++ + +T+
Sbjct: 369 ELADDRVSPTIEAVLLLQGKTS 390
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
Query: 5 LTPSKRPHDDDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIMFRVLCPVSKIDGVIGKD 64
L KR + + E N + K + + P ++R+LCP + I VIGK
Sbjct: 4 LYSGKRTRTEHDLAENNDRNKRRNSGTGREQTMPGAD---STVYRILCPSNVIGSVIGKG 60
Query: 65 GEMMSQISQDTGVTIRVEETVSGSDERLVVIEAS 98
G+++ + Q+T IRV + V G DER++VI +S
Sbjct: 61 GKVIKSMRQETRSKIRVADAVPGVDERVIVIFSS 94
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 70/165 (42%), Gaps = 58/165 (35%)
Query: 48 FRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSEN 107
RVLCP KI GVIGK G + + DTG +IRVE+ + SDER++V+ A++
Sbjct: 318 IRVLCPNDKIGGVIGKGGNTIKSMRNDTGASIRVEDAQTESDERVIVVSATE-------- 369
Query: 108 LEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERM 167
L ++ + ++ LLL +
Sbjct: 370 ---------------------------------------LADDRVSPTIEAVLLLQGK-- 388
Query: 168 VEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI 212
+ D++ S++F LV S +GCLLGKGG +I ++
Sbjct: 389 -----TSGTTDKDGAISTRF----LVPSKHIGCLLGKGGNIISEM 424
>gi|224121400|ref|XP_002330818.1| predicted protein [Populus trichocarpa]
gi|222872620|gb|EEF09751.1| predicted protein [Populus trichocarpa]
Length = 405
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 171/371 (46%), Gaps = 50/371 (13%)
Query: 318 TFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRIS 377
FRL+ +VG +IG+ G +++ + ET I+++E G DR+++ISG P+ S
Sbjct: 12 VFRLIVPLSKVGSIIGRRGELVKKMCDETRARIRILEGPLGISDRIVLISGKEEPEAPQS 71
Query: 378 APQDAVLRVQTRIARAIPDNREQTVMT-----------RLLVASNQIGCLLGKGGSIIAE 426
DAV+RV R++ P + T RLLVAS+Q L+GK GSII
Sbjct: 72 PAMDAVMRVFKRVSGLSPGEGDNTGSAAAAAGSAFCSIRLLVASSQAINLIGKQGSIIKS 131
Query: 427 MRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFF-RDAFPS 485
+++ +GA + ++ +D++P A+ +E +V I+GE V +AL + +LR P
Sbjct: 132 IQENTGAAVHVMAEDELPSYATSDERIVEIHGEAMKVFKALEAVIGQLRKFLVDHSVIPI 191
Query: 486 INRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSF-------HKFDAVGGPPPPGSF 538
+ N T + Q P + R +++ P ++S + P+ + P S
Sbjct: 192 FEKTYNAT-ISQECPADA---RPDIAQPSLHSAYVPTIPSGIASDYSLSFKRDP----SI 243
Query: 539 HPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVV---- 594
+ H+ + F H I +PG+ + D G +GF G P+V
Sbjct: 244 YEHE--TQFEHKISQPGLSIYGQD------------PGIVGFRS-TGLGRAAAPIVTQVT 288
Query: 595 ----VPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQS 650
VP S I G G+ + IR+ S A ++I + + E + I GT Q AQ
Sbjct: 289 QTMQVPLSYAEDIIGVAGSNIAYIRRTSRAILSIQESRGLPDEITVEIKGTGAQVQMAQQ 348
Query: 651 LIQAFVMSETE 661
LIQ F+ + E
Sbjct: 349 LIQEFITNHKE 359
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 105/245 (42%), Gaps = 75/245 (30%)
Query: 34 SENQPSKSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLV 93
SE P +PG +FR++ P+SK+ +IG+ GE++ ++ +T IR+ E G +R+V
Sbjct: 1 SEKWPG--WPGDNVFRLIVPLSKVGSIIGRRGELVKKMCDETRARIRILEGPLGISDRIV 58
Query: 94 VIEASDNKKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKET 153
+I +G+EE E
Sbjct: 59 LI----------------------SGKEEP--------------------------EAPQ 70
Query: 154 SKVQKALLLVFERMVEVEPETEVADQENTKSSKFV-------LRLLVLSTQVGCLLGKGG 206
S A++ VF+R+ + P + +NT S+ +RLLV S+Q L+GK G
Sbjct: 71 SPAMDAVMRVFKRVSGLSP----GEGDNTGSAAAAAGSAFCSIRLLVASSQAINLIGKQG 126
Query: 207 CVIKQI-------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRD 253
+IK I D+LP+ A + + +V+I GE V KAL+ + Q L D
Sbjct: 127 SIIKSIQENTGAAVHVMAEDELPSYATSDERIVEIHGEAMKVFKALEAVIGQ-LRKFLVD 185
Query: 254 HESIP 258
H IP
Sbjct: 186 HSVIP 190
>gi|61661324|gb|AAX51268.1| FLK [Arabidopsis thaliana]
gi|61661326|gb|AAX51269.1| FLK [Arabidopsis thaliana]
Length = 577
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/352 (27%), Positives = 162/352 (46%), Gaps = 29/352 (8%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISA 378
FR+L ++VG +IG+ G +I+ + +ET IK+++ GT +R +++SG P+ +
Sbjct: 189 FRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSGKEEPESSLPP 248
Query: 379 PQDAVLRVQTRIARAIPDNREQT-----VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
D +LRV RI + Q V TRLLV ++Q G L+GK G + +++ S
Sbjct: 249 SMDGLLRVHMRIVDGLDGEASQAPPPSKVSTRLLVPASQAGSLIGKQGGTVKAIQEASAC 308
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPT 493
+R+LG + +P A +++ VV + GE +V AL I + LR ++R + P
Sbjct: 309 IVRVLGSEDLPVFALQDDRVVEVVGEPTSVHRALELIASHLRKFL-------VDRSIIPF 361
Query: 494 FLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHR 553
F +Q+ + + PP + ++GP +VGG G + + H
Sbjct: 362 FENQMQKPTRQMDH--MPPP--HQSWGPPQGHAPSVGG----GGYGHNPPPYMQPPPRHD 413
Query: 554 PGMPP---HMPDMKPWGPQGLMEVGG--PMGFPDFVGPPHRRVPVV----VPRSLVPIIQ 604
PP P M+ QG+ G PM PP V +P S +
Sbjct: 414 SYYPPPEMRQPPMEKQPHQGISAYGREPPMNVHVSSAPPMVAQQVTQQMQIPLSYADAVI 473
Query: 605 GEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFV 656
G G+ + R++S A +TI + + E + +SGT Q A LIQ F+
Sbjct: 474 GTSGSNISYTRRLSGATVTIQETRGVPGEMTVEVSGTGSQVQTAVQLIQNFM 525
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 96/221 (43%), Gaps = 70/221 (31%)
Query: 42 FPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNK 101
+PG +FR+L P K+ +IG+ G+++ +I ++T I++ + G+ ER V++ K
Sbjct: 183 WPGETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSG---K 239
Query: 102 KETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALL 161
+E +L S MDG LL
Sbjct: 240 EEPESSLPPS--------------------------------MDG-------------LL 254
Query: 162 LVFERMVEVEPETEVADQENTKS---SKFVLRLLVLSTQVGCLLGKGGCVIKQI------ 212
V R+V + D E +++ SK RLLV ++Q G L+GK G +K I
Sbjct: 255 RVHMRIV------DGLDGEASQAPPPSKVSTRLLVPASQAGSLIGKQGGTVKAIQEASAC 308
Query: 213 -------DKLPTCALASDEVVQITGEVDTVRKALKLISHQL 246
+ LP AL D VV++ GE +V +AL+LI+ L
Sbjct: 309 IVRVLGSEDLPVFALQDDRVVEVVGEPTSVHRALELIASHL 349
>gi|356536806|ref|XP_003536925.1| PREDICTED: poly(rC)-binding protein 1-like [Glycine max]
Length = 561
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 162/380 (42%), Gaps = 66/380 (17%)
Query: 318 TFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRIS 377
FR+L ++VG +IG+ G IR + ++T IK+++ GT +R +++S PD I
Sbjct: 163 VFRMLVPVQKVGSIIGRKGEFIRKITEDTKARIKILDGPPGTSERAVMVSAKEEPDCSIP 222
Query: 378 APQDAVLRVQTRIARAIPDNREQT------VMTRLLVASNQIGCLLGKGGSIIAEMRKLS 431
D +LRV ++ P + V+TRLLVA Q G L+GK GS I + +
Sbjct: 223 PAVDGLLRVHKQVVNVDPHPADSASGAVRPVVTRLLVADTQAGSLIGKQGSTIKSFQDAT 282
Query: 432 GAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLN 491
G IRILG + +P A ++ +V I GE V +A+ + LR ++R +
Sbjct: 283 GCNIRILGSEHLPVFALRDDSIVEIQGESSGVHKAVELVAIHLRKFL-------VDRSIV 335
Query: 492 PTFLDQVSPFPSFIGRRELSPPG--------------------------MYSNFGPSFHK 525
F Q+ P + + PPG + + P H
Sbjct: 336 GVFETQMQ-RPDVRANQNV-PPGPPHQPWGPPQGFPAPGPGSGGGPAFPPNTQYMPPSHN 393
Query: 526 FDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVG 585
+D +++P D S H+H+ P ++ D+ MG
Sbjct: 394 YD---------NYYPPADLSPMDKHLHQGPPPAYVRDVS-------------MGIHSSSA 431
Query: 586 PPHRRVP--VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPE 643
+ V + +P S + G GA + IR+ S A ITI + + E + ISGT
Sbjct: 432 QAQQSVTQHMQIPLSYADAVIGASGANISYIRRASGASITIQETRGVPGEMTVEISGTAS 491
Query: 644 QTHAAQSLIQAFVMSETETT 663
Q AAQ L+Q F M+E +
Sbjct: 492 QIQAAQQLVQNF-MAEAASA 510
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 94/218 (43%), Gaps = 63/218 (28%)
Query: 42 FPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNK 101
+PG +FR+L PV K+ +IG+ GE + +I++DT I++ + G+ ER V++ A K
Sbjct: 158 WPGENVFRMLVPVQKVGSIIGRKGEFIRKITEDTKARIKILDGPPGTSERAVMVSA---K 214
Query: 102 KETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALL 161
+E ++ +++ LL
Sbjct: 215 EEPDCSIPPAVD---------------------------------------------GLL 229
Query: 162 LVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI--------- 212
V +++V V+P AD + V RLLV TQ G L+GK G IK
Sbjct: 230 RVHKQVVNVDPHP--ADSASGAVRPVVTRLLVADTQAGSLIGKQGSTIKSFQDATGCNIR 287
Query: 213 ----DKLPTCALASDEVVQITGEVDTVRKALKLISHQL 246
+ LP AL D +V+I GE V KA++L++ L
Sbjct: 288 ILGSEHLPVFALRDDSIVEIQGESSGVHKAVELVAIHL 325
>gi|15229321|ref|NP_187112.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|6175183|gb|AAF04909.1|AC011437_24 putative RNA-binding protein [Arabidopsis thaliana]
gi|17979249|gb|AAL49941.1| AT3g04610/F7O18_9 [Arabidopsis thaliana]
gi|332640585|gb|AEE74106.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 577
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/352 (27%), Positives = 162/352 (46%), Gaps = 29/352 (8%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISA 378
FR+L ++VG +IG+ G +I+ + +ET IK+++ GT +R +++SG P+ +
Sbjct: 189 FRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSGKEEPESSLPP 248
Query: 379 PQDAVLRVQTRIARAIPDNREQT-----VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
D +LRV RI + Q V TRLLV ++Q G L+GK G + +++ S
Sbjct: 249 SMDGLLRVHMRIVDGLDGEASQAPPPSKVSTRLLVPASQAGSLIGKQGGTVKAIQEASAC 308
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPT 493
+R+LG + +P A +++ VV + GE +V AL I + LR ++R + P
Sbjct: 309 IVRVLGSEDLPVFALQDDRVVEVVGEPTSVHRALELIASHLRKFL-------VDRSIIPF 361
Query: 494 FLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHR 553
F +Q+ + + PP + ++GP +VGG G + + H
Sbjct: 362 FENQMQKPTRQMDH--MPPP--HQSWGPPQGHAPSVGG----GGYGHNPPPYMQPPPRHD 413
Query: 554 PGMPP---HMPDMKPWGPQGLMEVGG--PMGFPDFVGPPHRRVPVV----VPRSLVPIIQ 604
PP P M+ QG+ G PM PP V +P S +
Sbjct: 414 SYYPPPEMRQPPMEKQPHQGISAYGREPPMNVHVSSAPPMVAQQVTQQMQIPLSYADAVI 473
Query: 605 GEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFV 656
G G+ + R++S A +TI + + E + +SGT Q A LIQ F+
Sbjct: 474 GTSGSNISYTRRLSGATVTIQETRGVPGEMTVEVSGTGSQVQTAVQLIQNFM 525
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 96/221 (43%), Gaps = 70/221 (31%)
Query: 42 FPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNK 101
+PG +FR+L P K+ +IG+ G+++ +I ++T I++ + G+ ER V++ K
Sbjct: 183 WPGETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSG---K 239
Query: 102 KETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALL 161
+E +L S MDG LL
Sbjct: 240 EEPESSLPPS--------------------------------MDG-------------LL 254
Query: 162 LVFERMVEVEPETEVADQENTKS---SKFVLRLLVLSTQVGCLLGKGGCVIKQI------ 212
V R+V + D E +++ SK RLLV ++Q G L+GK G +K I
Sbjct: 255 RVHMRIV------DGLDGEASQAPPPSKVSTRLLVPASQAGSLIGKQGGTVKAIQEASAC 308
Query: 213 -------DKLPTCALASDEVVQITGEVDTVRKALKLISHQL 246
+ LP AL D VV++ GE +V +AL+LI+ L
Sbjct: 309 IVRVLGSEDLPVFALQDDRVVEVVGEPTSVHRALELIASHL 349
>gi|357117002|ref|XP_003560265.1| PREDICTED: uncharacterized protein LOC100827626 [Brachypodium
distachyon]
Length = 656
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/270 (34%), Positives = 135/270 (50%), Gaps = 29/270 (10%)
Query: 224 EVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATG 283
EV++ITG+ T+RKA+ +S L + S+ + T PS P S Y
Sbjct: 190 EVIEITGDRTTIRKAIVALSSYLQGD--LHACSLTTSVTTPSPMFPWKSSEVPEPNYGDL 247
Query: 284 HRDV----ADIHLPM---PPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGG 336
H V A+I++P P + E+ L + ++FRLLCH GG+IGK G
Sbjct: 248 HSGVSTKCANINVPWIDCPQDVAGNVETENLQQ-------ISFRLLCHVNLAGGLIGKKG 300
Query: 337 AIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPD 396
II+ + ETG I V SG +R+I IS P S Q A+L + R+ +
Sbjct: 301 MIIKGFETETGASIDVGNPFSGCMERVITISALESPGKH-SKVQSAILCIFDRM-----E 354
Query: 397 NREQTVM-------TRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASE 449
E+ +M R+LV +Q L+G GG+II EM K +GA I IL + +P CAS
Sbjct: 355 EVERNLMFGKPECSARVLVPKSQFSSLVGLGGAIIKEMVKSTGARIEILDEMDVPACASN 414
Query: 450 NEEVVLINGEFEAVQEALFQITTRLRHHFF 479
E V+ I G V++ALF ++ +LR+H F
Sbjct: 415 CERVLQITGNLVNVRDALFVVSEKLRNHAF 444
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 102/418 (24%), Positives = 162/418 (38%), Gaps = 104/418 (24%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
I FR+LC V+ G+IGK G ++ +TG +I V SG ER++ I A
Sbjct: 281 ISFRLLCHVNLAGGLIGKKGMIIKGFETETGASIDVGNPFSGCMERVITISA-------- 332
Query: 106 ENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFE 165
L S + SKVQ A+L +F+
Sbjct: 333 -----------------------------------------LESPGKHSKVQSAILCIFD 351
Query: 166 RMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDK----------- 214
RM EVE E + R+LV +Q L+G GG +IK++ K
Sbjct: 352 RMEEVERNLMFGKPECSA------RVLVPKSQFSSLVGLGGAIIKEMVKSTGARIEILDE 405
Query: 215 --LPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHS 272
+P CA + V+QITG + VR AL ++S +L +H+
Sbjct: 406 MDVPACASNCERVLQITGNLVNVRDALFVVSEKLR----------------------NHA 443
Query: 273 VSSQGAPYATGHRDVADI-----HLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDER 327
SS+ + G+ +DI + + S + + R P ++ L +
Sbjct: 444 FSSKCTKHDDGNATASDIIESTASMTVNISSTDNYSTDNFPRTDHEPSVIQMESLENSFS 503
Query: 328 VGGVIGKGGAIIRSL--KQETGCDIKVMEAVSGTEDRLIVISGPAHP----DDRISAPQD 381
+ G + SL ++TG E VI+G P DDRIS
Sbjct: 504 AFHLGSPGSLELESLANAEDTGIINLKNEGQKPPNRSCAVITGVQKPADGDDDRISKSNH 563
Query: 382 AVLR-VQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKG-GSIIAEMRKLSGAYIRI 437
+ + ++ R + D T MT + A I CLL + G+ +A++R+++GA I +
Sbjct: 564 GITSPDENQLMRVMKDPV-VTRMTYEIAACGGIFCLLYRDKGNNLAQLRQITGADISV 620
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 602 IIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAA 648
++ + G L Q+RQI+ A I++ DP P ++ I+ISGTP+Q A
Sbjct: 598 LLYRDKGNNLAQLRQITGADISVYDPPPETSDCSIVISGTPDQAQLA 644
>gi|225445949|ref|XP_002264417.1| PREDICTED: KH domain-containing protein At4g18375 isoform 1 [Vitis
vinifera]
Length = 466
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 104/357 (29%), Positives = 161/357 (45%), Gaps = 36/357 (10%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISA 378
FRL+ +VG +IG+ G +I+ + +ET I+V++ GT DR+++ISG P+ +S
Sbjct: 80 FRLIVPVLKVGSIIGRKGELIKKMCEETRARIRVLDGAVGTSDRIVLISGREEPEAPLSP 139
Query: 379 PQDAVLRVQTRI---------ARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRK 429
DAV+RV R+ +A RLLVAS Q L+GK GS+I +++
Sbjct: 140 AMDAVIRVFKRVTGLSESEGDGKAYGAAGVAFCSIRLLVASTQAINLIGKQGSLIKSIQE 199
Query: 430 LSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFF-RDAFPSINR 488
+GA +R+L D++P A+ +E +V + GE VQ+AL + LR P R
Sbjct: 200 STGASVRVLSGDEVPFYAAADERIVELQGEALKVQKALEAVVGHLRKFLVDHSVLPLFER 259
Query: 489 PLNPTFLDQVSPFPSFIGRREL---SPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHS 545
N T + Q ++ + L S GM S++ P + D
Sbjct: 260 TYNAT-ISQDRQSDTWADKSLLHGTSQTGMGSDYS------------LPAKRESLYLDRE 306
Query: 546 AFMHHIHRPGMPPHMPDMKPWGPQGLMEVG-GPMGFPDFVGPPHRRVPVVVPRSLVPIIQ 604
M H G+P + + G G+ G G G P + +P S I
Sbjct: 307 TQMEH---SGLPMYGQEH---GLSGIRSSGLGRAGAPIVTQIAQ---TMQIPLSYAEDII 357
Query: 605 GEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSETE 661
G GA + IR+ S A +T+ + + E + I GT Q AQ LIQ F+ + E
Sbjct: 358 GIGGANIAYIRRTSGAILTVQESRGLPDEITVEIKGTSSQVQTAQQLIQEFISNHKE 414
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 92/219 (42%), Gaps = 62/219 (28%)
Query: 42 FPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNK 101
+PG +FR++ PV K+ +IG+ GE++ ++ ++T IRV + G+ +R+V+I
Sbjct: 74 WPGDCVFRLIVPVLKVGSIIGRKGELIKKMCEETRARIRVLDGAVGTSDRIVLI------ 127
Query: 102 KETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALL 161
+GREE E S A++
Sbjct: 128 ----------------SGREEP--------------------------EAPLSPAMDAVI 145
Query: 162 LVFERMVEVEPETEVADQENTKSSKFV-LRLLVLSTQVGCLLGKGGCVIKQI-------- 212
VF+R+ + F +RLLV STQ L+GK G +IK I
Sbjct: 146 RVFKRVTGLSESEGDGKAYGAAGVAFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASV 205
Query: 213 -----DKLPTCALASDEVVQITGEVDTVRKALKLISHQL 246
D++P A A + +V++ GE V+KAL+ + L
Sbjct: 206 RVLSGDEVPFYAAADERIVELQGEALKVQKALEAVVGHL 244
>gi|255561873|ref|XP_002521945.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223538749|gb|EEF40349.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 548
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 161/381 (42%), Gaps = 53/381 (13%)
Query: 304 SGVLDRPKPS-PEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDR 362
SG +++ P P FR+L ++VG +IG+ G I+ + +ET IK+++ GT +R
Sbjct: 138 SGGIEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTER 197
Query: 363 LIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQT-------VMTRLLVASNQIGC 415
+++S PD + D +LRV RI + + V TRLLV ++Q G
Sbjct: 198 AVMVSAKEEPDSALPPAMDGLLRVHKRIVDGLDGDSSHASSGTGTKVSTRLLVPASQAGS 257
Query: 416 LLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLR 475
L+GK G + +++ S +R+LG + +P A +++ VV + G+ V +A+ I + LR
Sbjct: 258 LIGKQGGTVKSIQEASSCVVRVLGAEDLPVFALQDDRVVEVLGDAAGVHKAVELIASHLR 317
Query: 476 HHFF-RDAFPSINRPL---NPTFLDQVSPF----------------PSFIGRRELSPPGM 515
R P + NP ++ + P P + + + PP
Sbjct: 318 KFLVDRSIIPLFEMHMQMQNPPHMEHMPPHQSWGPPQGIPPNAGGGPGYGNPQYMPPPRQ 377
Query: 516 YSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVG 575
N+ P PPP PH SA+ P G+
Sbjct: 378 IENYYPPADL-------PPPMEKQPHQGISAYGRE----------------APMGVHGSS 414
Query: 576 GPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETV 635
P + +++ +P S + G G + IR+ S A +TI + + E
Sbjct: 415 NSQAAPSMITQITQQMQ--IPLSYADAVIGTAGTSISYIRRASGATVTIQETRGVPGEMT 472
Query: 636 IIISGTPEQTHAAQSLIQAFV 656
+ ISGT Q AQ LIQ F+
Sbjct: 473 VEISGTASQVQTAQQLIQNFM 493
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 94/218 (43%), Gaps = 62/218 (28%)
Query: 42 FPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNK 101
+PG +FR+L P K+ +IG+ GE + +I ++T I++ + G+ ER V++ A K
Sbjct: 148 WPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMVSA---K 204
Query: 102 KETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALL 161
+E L + MDGL L
Sbjct: 205 EEPDSALPPA--------------------------------MDGL-------------L 219
Query: 162 LVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI--------- 212
V +R+V+ + + + + +K RLLV ++Q G L+GK G +K I
Sbjct: 220 RVHKRIVD-GLDGDSSHASSGTGTKVSTRLLVPASQAGSLIGKQGGTVKSIQEASSCVVR 278
Query: 213 ----DKLPTCALASDEVVQITGEVDTVRKALKLISHQL 246
+ LP AL D VV++ G+ V KA++LI+ L
Sbjct: 279 VLGAEDLPVFALQDDRVVEVLGDAAGVHKAVELIASHL 316
>gi|356504987|ref|XP_003521274.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 529
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 103/383 (26%), Positives = 159/383 (41%), Gaps = 71/383 (18%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISA 378
FR+L ++VG +IG+ G I+ + +ET IK+++ G +R +++S PD I
Sbjct: 128 FRMLVPVQKVGSIIGRKGEFIKKITEETKARIKILDGPPGISERAVMVSAKEEPDRPIPP 187
Query: 379 PQDAVLRVQTRIARAIPDNRE------QTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSG 432
D +LRV ++ D + ++V+TRLLVA Q G L+GK GS I ++ SG
Sbjct: 188 AIDGLLRVHKQVINVDRDLVDSALAAGRSVVTRLLVADTQAGSLIGKQGSTIKSIQDGSG 247
Query: 433 AYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNP 492
IR+LG + +P A ++ +V I GE V +A+ I LR ++R +
Sbjct: 248 CTIRVLGSENLPVFALRDDSIVEIQGESAGVHKAVELIAVHLRKFL-------VDRSIVG 300
Query: 493 TFLDQVSPFPSFIGRRELSPPGMYSNFG--------------------------PSFHKF 526
F Q+ P + + P + N+G P H +
Sbjct: 301 VFETQMQ-RPDVRVNQNVPP---HQNWGPPPQGFPAPAGGGGGGPAFAPNHQYMPPSHHY 356
Query: 527 DAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGP 586
D+ PP P D H+H+ P + D MG P
Sbjct: 357 DSYY---PPTELPPMDK------HLHQGPPPAYAKDAS-------------MGIHSSSAP 394
Query: 587 PHRRVPVVV------PRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISG 640
P + V V P + + G G + IR+ S A ITI + + E + ISG
Sbjct: 395 PQQSVVTKVTQHMQIPLTYADAVIGASGTNISYIRRASGASITIQETRGVPGEMTVEISG 454
Query: 641 TPEQTHAAQSLIQAFVMSETETT 663
T Q AAQ L+Q F+ T
Sbjct: 455 TSSQIQAAQQLVQNFMAEAASAT 477
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 92/218 (42%), Gaps = 63/218 (28%)
Query: 42 FPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNK 101
+PG +FR+L PV K+ +IG+ GE + +I+++T I++ + G ER V++ A K
Sbjct: 122 WPGENVFRMLVPVQKVGSIIGRKGEFIKKITEETKARIKILDGPPGISERAVMVSA---K 178
Query: 102 KETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALL 161
+E + +I+ LL
Sbjct: 179 EEPDRPIPPAID---------------------------------------------GLL 193
Query: 162 LVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI--------- 212
V ++++ V+ ++ D V RLLV TQ G L+GK G IK I
Sbjct: 194 RVHKQVINVD--RDLVDSALAAGRSVVTRLLVADTQAGSLIGKQGSTIKSIQDGSGCTIR 251
Query: 213 ----DKLPTCALASDEVVQITGEVDTVRKALKLISHQL 246
+ LP AL D +V+I GE V KA++LI+ L
Sbjct: 252 VLGSENLPVFALRDDSIVEIQGESAGVHKAVELIAVHL 289
>gi|356572245|ref|XP_003554280.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 528
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 160/362 (44%), Gaps = 28/362 (7%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISA 378
FR+L ++VG +IG+ G I+ + +ET IK+++ G +R +++S PD I
Sbjct: 127 FRMLVPVQKVGSIIGRKGEFIKKITEETKARIKILDGPPGISERAVMVSAKEEPDCPIPP 186
Query: 379 PQDAVLRVQTRIA---RAIPDNR---EQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSG 432
D +LRV ++ R + D+ ++V+TRLLVA Q G L+GK GS I ++ SG
Sbjct: 187 AVDGLLRVHKQVINVDRDLADSALAAGRSVVTRLLVADTQAGSLIGKQGSTIKSIQDGSG 246
Query: 433 AYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNP 492
IR+LG + +P A ++ +V I GE V +A+ I LR ++R +
Sbjct: 247 CTIRVLGSENLPIFALRDDSIVEIQGESAGVHKAVELIAVHLRKFL-------VDRSIVG 299
Query: 493 TFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAF--MHH 550
F Q+ S + + PP + N+GP F A G G +H HH
Sbjct: 300 VFETQMQ--MSDVRVNQNLPP--HQNWGPPPQGFPAPAGGGGGGGPAFAPNHQYMPPSHH 355
Query: 551 IHRPGMPPHMPDMKP---WGPQGLMEVGGPMGFPDFVGPPHRRVPVVV------PRSLVP 601
P +P M GP MG P + V V P +
Sbjct: 356 YDSYYPPTELPPMDKHLHQGPPPAYARDASMGIHSSSAQPQQSVVTKVTQHMQIPLTYAD 415
Query: 602 IIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSETE 661
+ G G + IR+ S A ITI + + E + ISGT Q AAQ L+Q F+
Sbjct: 416 AVIGASGTNISYIRRASGASITIQETRGVPGEMTVEISGTSSQIQAAQQLVQNFMAEAAS 475
Query: 662 TT 663
T
Sbjct: 476 AT 477
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 93/218 (42%), Gaps = 63/218 (28%)
Query: 42 FPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNK 101
+PG +FR+L PV K+ +IG+ GE + +I+++T I++ + G ER V++ A K
Sbjct: 121 WPGENVFRMLVPVQKVGSIIGRKGEFIKKITEETKARIKILDGPPGISERAVMVSA---K 177
Query: 102 KETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALL 161
+E + +++ LL
Sbjct: 178 EEPDCPIPPAVD---------------------------------------------GLL 192
Query: 162 LVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI--------- 212
V ++++ V+ ++AD V RLLV TQ G L+GK G IK I
Sbjct: 193 RVHKQVINVD--RDLADSALAAGRSVVTRLLVADTQAGSLIGKQGSTIKSIQDGSGCTIR 250
Query: 213 ----DKLPTCALASDEVVQITGEVDTVRKALKLISHQL 246
+ LP AL D +V+I GE V KA++LI+ L
Sbjct: 251 VLGSENLPIFALRDDSIVEIQGESAGVHKAVELIAVHL 288
>gi|224123476|ref|XP_002319087.1| predicted protein [Populus trichocarpa]
gi|222857463|gb|EEE95010.1| predicted protein [Populus trichocarpa]
Length = 392
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 106/368 (28%), Positives = 170/368 (46%), Gaps = 62/368 (16%)
Query: 321 LLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQ 380
+L ++VG +IG+ G I+ + +ET IK+++ GT +R +++S PD +
Sbjct: 1 MLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMVSAKEEPDSSLPPAM 60
Query: 381 DAVLRVQTRIARAIPDNREQT-------VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
D +LRV RI + + T V TRLLV ++Q G L+GK G + +++ S
Sbjct: 61 DGLLRVHKRIIDGLDSDSSNTPPTSGAKVSTRLLVPASQAGSLIGKQGGTVKSIQEASTC 120
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFF-RDAFPSINRPL-- 490
+R+LG + +P A +++ VV + GE V +A+ I + LR R P +
Sbjct: 121 IVRVLGAEDLPVFALQDDRVVEVLGEAAGVHKAVELIASHLRKFLVDRSIIPLFEMQMQM 180
Query: 491 -NPTFLDQVSPFPSFIGRRELSP-----PGMYSNFGPSFHKFDAVGGPPPP---GSFHPH 541
NP+ ++Q+ P S+ + L P PG N P + PPP +++P
Sbjct: 181 SNPS-MEQMPPHQSWGPPQPLPPNHGGGPGYGQN--PQYM--------PPPRQLDNYYPP 229
Query: 542 DDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVG--GPMG---------FPDFVGPPHRR 590
D MPP M + +P QG+ G PMG P + ++
Sbjct: 230 AD------------MPPLM-EKQPH--QGISAYGREAPMGSHASSNAQAAPSMITQITQQ 274
Query: 591 VPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPK--PGATETVIIISGTPEQTHAA 648
+ +P S + G GA + IR+ S A +TI + + PGA + ISGT Q A
Sbjct: 275 --MQIPLSYADAVIGTAGASISYIRRASGATVTIQETRGVPGA--MTVEISGTASQVQTA 330
Query: 649 QSLIQAFV 656
Q LIQ F+
Sbjct: 331 QQLIQNFM 338
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 87/373 (23%), Positives = 145/373 (38%), Gaps = 101/373 (27%)
Query: 50 VLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLE 109
+L P K+ +IG+ GE + +I ++T I++ + G+ ER V++ A K+E +L
Sbjct: 1 MLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMVSA---KEEPDSSLP 57
Query: 110 ASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVE 169
+ MDGL L V +R+++
Sbjct: 58 PA--------------------------------MDGL-------------LRVHKRIID 72
Query: 170 VEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKLPTC----------- 218
+++ ++ T +K RLLV ++Q G L+GK G +K I + TC
Sbjct: 73 GL-DSDSSNTPPTSGAKVSTRLLVPASQAGSLIGKQGGTVKSIQEASTCIVRVLGAEDLP 131
Query: 219 --ALASDEVVQITGEVDTVRKALKLI-SH----------------QLLDNSPRDHESIPG 259
AL D VV++ GE V KA++LI SH Q+ ++P + P
Sbjct: 132 VFALQDDRVVEVLGEAAGVHKAVELIASHLRKFLVDRSIIPLFEMQMQMSNPSMEQMPPH 191
Query: 260 NPTGPSHPL-PDHSVS---SQGAPYATGHRDVADIHLP--MPPSIPKFHESGVLDRPKPS 313
GP PL P+H Q Y R + + + P MPP + K G+ + +
Sbjct: 192 QSWGPPQPLPPNHGGGPGYGQNPQYMPPPRQLDNYYPPADMPPLMEKQPHQGISAYGREA 251
Query: 314 P----------------EILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS 357
P +T ++ VIG GA I +++ +G + + E
Sbjct: 252 PMGSHASSNAQAAPSMITQITQQMQIPLSYADAVIGTAGASISYIRRASGATVTIQETRG 311
Query: 358 GTEDRLIVISGPA 370
+ ISG A
Sbjct: 312 VPGAMTVEISGTA 324
>gi|356562072|ref|XP_003549298.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
Length = 436
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 169/366 (46%), Gaps = 52/366 (14%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISA 378
FRL+ +VG +IG+ G +I+ +ET I+V++ GT DR+++ISG P+ +S
Sbjct: 48 FRLIVPVLKVGSIIGRKGELIKKTCEETKARIRVLDGAVGTSDRIVLISGKEEPEAPLSP 107
Query: 379 PQDAVLRVQTRI---ARAIPDNREQTVM---TRLLVASNQIGCLLGKGGSIIAEMRKLSG 432
+AV+RV R+ + +N+ V RLLVAS Q L+GK GS+I +++ +G
Sbjct: 108 AMNAVIRVFKRVSGFSEIDAENKASAVAFCSVRLLVASTQAINLIGKQGSLIKSIQENTG 167
Query: 433 AYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDA-FPSINRPLN 491
A +R+L D++P A+ +E +V + GE V +AL + LR ++ P + N
Sbjct: 168 ASVRVLSGDEVPFYAAADERIVELQGEAMKVLKALEAVVGHLRKFLVDNSVLPLFEKTYN 227
Query: 492 PTFLDQVSPFPSFIGRREL---SPPGMYSNFGPSFHKFDAVGG----------PPPPGSF 538
T + +++ + L S P + ++ P K D++ PP S
Sbjct: 228 ATISQEHQADTTWVDKPSLHSASQPSIVTDL-PLSTKRDSLFADRESQLDSLLPPSTMSI 286
Query: 539 HPHDDHSAFMHH--IHRPGMPPHMPDMKPWGPQGLMEVGGPMGFP-DFVGPPHRRVPVVV 595
+ D + + + RP PP + + + + P+ + D +G
Sbjct: 287 YGQDSSLSGLRSSALSRPSAPPIVTTV-------IQTMQIPLSYAEDIIG---------- 329
Query: 596 PRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAF 655
IQG + ++ IR S A +T+ + P E ++ I GT Q AQ LIQ
Sbjct: 330 -------IQGTN---IEYIRCTSGAILTVQE-SPVPDEIIVEIKGTSSQVQTAQQLIQEV 378
Query: 656 VMSETE 661
+ + E
Sbjct: 379 ISNHKE 384
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 69/227 (30%)
Query: 42 FPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNK 101
+PG +FR++ PV K+ +IG+ GE++ + ++T IRV + G+ +R+V+I
Sbjct: 42 WPGHCVFRLIVPVLKVGSIIGRKGELIKKTCEETKARIRVLDGAVGTSDRIVLI------ 95
Query: 102 KETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALL 161
+G+EE E S A++
Sbjct: 96 ----------------SGKEEP--------------------------EAPLSPAMNAVI 113
Query: 162 LVFERMVEVEPETEVADQENTKSSKFV-LRLLVLSTQVGCLLGKGGCVIKQI-------- 212
VF+R V +E+ + + F +RLLV STQ L+GK G +IK I
Sbjct: 114 RVFKR---VSGFSEIDAENKASAVAFCSVRLLVASTQAINLIGKQGSLIKSIQENTGASV 170
Query: 213 -----DKLPTCALASDEVVQITGEVDTVRKALK-LISHQ---LLDNS 250
D++P A A + +V++ GE V KAL+ ++ H L+DNS
Sbjct: 171 RVLSGDEVPFYAAADERIVELQGEAMKVLKALEAVVGHLRKFLVDNS 217
>gi|116784616|gb|ABK23409.1| unknown [Picea sitchensis]
Length = 407
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 161/359 (44%), Gaps = 65/359 (18%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
+ FR++ ++G VIGK G+ I L+++TG IK+ + V+ EDR+I+IS ++
Sbjct: 93 IVFRIVVASNKIGKVIGKQGSKINQLREDTGARIKIADPVTPLEDRVIIISSKGEEEEET 152
Query: 377 SAPQDAVLRVQTRIARAIPDNREQTV------------MTRLLVASNQIGCLLGKGGSII 424
SA + A++++ T I + ++ E + M RLL+A +Q G L+G G I
Sbjct: 153 SAAEQALIQIATVI---LEESGESSATAKVGTRHVGPNMMRLLIAGSQAGSLIGASGKTI 209
Query: 425 AEMRKLSGAYIRILGKDQIPKC--ASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDA 482
E+R SGA I+IL ++ P C ASE + +V I+GE V +AL I LR H R+
Sbjct: 210 KEIRNDSGATIKILPQNLSPICASASETDRLVQISGEVSQVLKALDHIGVTLREHPPREV 269
Query: 483 FPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHD 542
+ PT+ +SP + + PG G S + + G G+
Sbjct: 270 IST-----RPTYYAGLSPANGLMVLPQTVLPGYNMQTGNSNYSYLGAAGRAAGGTI---- 320
Query: 543 DHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPI 602
+AF +P +MK +P S+
Sbjct: 321 -SAAF-------ALPKVTVEMK------------------------------IPSSVAGG 342
Query: 603 IQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSETE 661
+ G+ G + QIR +S A + + K GAT T I GT Q AQ+L+ + ++ +
Sbjct: 343 VIGKRGDNISQIRSLSGAIVKVIGEKDGATRT-IFFEGTAHQVATAQNLVNNHINAQAQ 400
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 141/355 (39%), Gaps = 94/355 (26%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
I+FR++ +KI VIGK G ++Q+ +DTG I++ + V+ ++R+++I +
Sbjct: 93 IVFRIVVASNKIGKVIGKQGSKINQLREDTGARIKIADPVTPLEDRVIIISSKGE----- 147
Query: 106 ENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFE 165
E+ETS ++AL+ +
Sbjct: 148 -------------------------------------------EEEETSAAEQALIQIAT 164
Query: 166 RMVEVEPETEVADQENTKSSK-FVLRLLVLSTQVGCLLGKGGCVIKQI------------ 212
++E E+ + T+ ++RLL+ +Q G L+G G IK+I
Sbjct: 165 VILEESGESSATAKVGTRHVGPNMMRLLIAGSQAGSLIGASGKTIKEIRNDSGATIKILP 224
Query: 213 -DKLPTCALAS--DEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTG------ 263
+ P CA AS D +VQI+GEV V KAL I L ++ PR E I PT
Sbjct: 225 QNLSPICASASETDRLVQISGEVSQVLKALDHIGVTLREHPPR--EVISTRPTYYAGLSP 282
Query: 264 -------PSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEI 316
P LP +++ + + Y+ +L S PK
Sbjct: 283 ANGLMVLPQTVLPGYNMQTGNSNYS---------YLGAAGRAAGGTISAAFALPK----- 328
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAH 371
+T + GGVIGK G I ++ +G +KV+ G R I G AH
Sbjct: 329 VTVEMKIPSSVAGGVIGKRGDNISQIRSLSGAIVKVIGEKDGAT-RTIFFEGTAH 382
Score = 39.3 bits (90), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 50/87 (57%), Gaps = 11/87 (12%)
Query: 392 RAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENE 451
RA R + ++ R++VASN+IG ++GK GS I ++R+ +GA I+I P E +
Sbjct: 83 RAKRAARGRDIVFRIVVASNKIGKVIGKQGSKINQLREDTGARIKIAD----PVTPLE-D 137
Query: 452 EVVLINGE------FEAVQEALFQITT 472
V++I+ + A ++AL QI T
Sbjct: 138 RVIIISSKGEEEEETSAAEQALIQIAT 164
>gi|449463577|ref|XP_004149510.1| PREDICTED: LOW QUALITY PROTEIN: poly(rC)-binding protein 3-like
[Cucumis sativus]
Length = 468
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 106/375 (28%), Positives = 166/375 (44%), Gaps = 29/375 (7%)
Query: 294 MPPSIPKFHE----SGVLDRPKPS-PEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGC 348
+PPS HE +G D+ P P FRL+ +VG +IG+ G +I+ + +ET
Sbjct: 53 VPPSDSAAHEPSNHTGPSDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRA 112
Query: 349 DIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMT---- 404
I+V++ GT DR+++ISG + +S DAV+RV R++ + +N ++ +
Sbjct: 113 RIRVLDGAVGTPDRVVLISGKEELESPLSPAMDAVIRVFKRVS-GLSENEDEAKASFCSI 171
Query: 405 RLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQ 464
RLLVAS Q L+GK GS+I +++ +GA +R+L D++P A +E +V + GE V
Sbjct: 172 RLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVL 231
Query: 465 EALFQITTRLRHHFF-RDAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSF 523
+AL + LR P + N P+ R+ + S S
Sbjct: 232 KALEGVVGHLRKFLVDHSVLPLFEKSFNT---------PASQDRQTETWADKSSLLTASQ 282
Query: 524 HKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPD--MKPWGPQGLMEVGGPMGFP 581
A P D + F HI G+ + D + G+ GGP+
Sbjct: 283 SIISAEYAPSTKRESLFLDREAHFDSHISSSGISLYGQDRVLPTIRSSGVGRSGGPI--- 339
Query: 582 DFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGT 641
+ +P S I G G + IR+ S A +TI + + E + I GT
Sbjct: 340 ----VTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGT 395
Query: 642 PEQTHAAQSLIQAFV 656
Q AQ LIQ V
Sbjct: 396 SSQVQMAQQLIQEAV 410
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 112/261 (42%), Gaps = 83/261 (31%)
Query: 12 HDDDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQI 71
H+ NHT P+ K K G +PG +FR++ PV K+ +IG+ G+++ ++
Sbjct: 61 HEPSNHTGPSDK----KWPG----------WPGDCVFRLIVPVVKVGSIIGRKGDLIKKM 106
Query: 72 SQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASVADESDN 131
++T IRV + G+ +R+V+I +G+EE
Sbjct: 107 CEETRARIRVLDGAVGTPDRVVLI----------------------SGKEEL-------- 136
Query: 132 KKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRL 191
E S A++ VF+R+ + +++ K+S +RL
Sbjct: 137 ------------------ESPLSPAMDAVIRVFKRVSGLS-----ENEDEAKASFCSIRL 173
Query: 192 LVLSTQVGCLLGKGGCVIKQI-------------DKLPTCALASDEVVQITGEVDTVRKA 238
LV STQ L+GK G +IK I D++P A A + +V++ GE V KA
Sbjct: 174 LVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKA 233
Query: 239 LK-LISHQLLDNSPRDHESIP 258
L+ ++ H L DH +P
Sbjct: 234 LEGVVGH--LRKFLVDHSVLP 252
>gi|293331673|ref|NP_001170496.1| uncharacterized protein LOC100384498 [Zea mays]
gi|238005660|gb|ACR33865.1| unknown [Zea mays]
Length = 239
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/264 (32%), Positives = 130/264 (49%), Gaps = 39/264 (14%)
Query: 405 RLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQ 464
RLLV + IGCL+G+GGSI+ +MRK + A I I D+ P+ AS ++E+V ++GE + ++
Sbjct: 4 RLLVPNKVIGCLIGRGGSIVNDMRKKTKANILISKGDK-PRRASSSDELVEVSGEADKLR 62
Query: 465 EALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFH 524
+AL QI RLR +++ S N + +L+ S +G S
Sbjct: 63 DALVQIILRLREAVLKESVESQNSDRDG----------------QLTVAASDSLYGSSL- 105
Query: 525 KFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPH----MPDMKPWGPQGLMEV--GGPM 578
P + PH+ A + + R G P P +G M+V G
Sbjct: 106 ---------PLPALLPHNQQIAPLGY-DRRGEPERALEVFPRTSSYGYSS-MQVTDDGYG 154
Query: 579 GFPDFVGPPHR----RVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATET 634
G P + + R+ + VP S + + G+ G L IR+IS A I I +PK E
Sbjct: 155 GLPSYASKAYEEHVPRLEMTVPASGISKVMGKHGTNLDNIRKISGAHIEIIEPKSSRHEH 214
Query: 635 VIIISGTPEQTHAAQSLIQAFVMS 658
+ ISGT EQ H+A++LI+AF+MS
Sbjct: 215 IAYISGTSEQRHSAENLIKAFIMS 238
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 97/222 (43%), Gaps = 42/222 (18%)
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQIDK------------LPTCALASDEVVQITGEVDTVR 236
LRLLV + +GCL+G+GG ++ + K P A +SDE+V+++GE D +R
Sbjct: 3 LRLLVPNKVIGCLIGRGGSIVNDMRKKTKANILISKGDKPRRASSSDELVEVSGEADKLR 62
Query: 237 KALKLISHQLLD----------NSPRDHE---SIPGNPTGPSHPLPD---HSVSSQGAPY 280
AL I +L + NS RD + + + G S PLP H + Q AP
Sbjct: 63 DALVQIILRLREAVLKESVESQNSDRDGQLTVAASDSLYGSSLPLPALLPH--NQQIAPL 120
Query: 281 ATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERV------------ 328
R + L + P + S + + ++ ++E V
Sbjct: 121 GYDRRGEPERALEVFPRTSSYGYSSMQVTDDGYGGLPSYASKAYEEHVPRLEMTVPASGI 180
Query: 329 GGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPA 370
V+GK G + ++++ +G I+++E S + + ISG +
Sbjct: 181 SKVMGKHGTNLDNIRKISGAHIEIIEPKSSRHEHIAYISGTS 222
>gi|212723602|ref|NP_001132277.1| uncharacterized protein LOC100193713 [Zea mays]
gi|194693942|gb|ACF81055.1| unknown [Zea mays]
Length = 510
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 101/168 (60%), Gaps = 4/168 (2%)
Query: 315 EILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA-VSGTEDRLIVISGPAHPD 373
E + R+LC E +G VIGK GA +R ++Q+TG IKV E + +RLI+IS P
Sbjct: 31 EEFSIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIIISSNEIPA 90
Query: 374 DRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
+ IS +A++ + +++ P + + TRL+V S+++GC++G+GG +I +MR+ +GA
Sbjct: 91 EPISPAIEALILLHDKVS--APSEKHHS-STRLVVPSSKVGCIIGEGGKVITDMRRRTGA 147
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRD 481
IR+ K PK S ++E+V + G + AL +I +RLR RD
Sbjct: 148 EIRVYSKADKPKYLSFDDELVQVAGPPTIARGALTEIASRLRTRTLRD 195
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 87/220 (39%), Gaps = 73/220 (33%)
Query: 48 FRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEET-VSGSDERLVVIEASDNKKETSE 106
R+LC I VIGK G + ++ Q TG I+V+E S ERL++I +++ +E
Sbjct: 35 IRILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIIISSNEIP---AE 91
Query: 107 NLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFER 166
+ +IE AL+L+ ++
Sbjct: 92 PISPAIE---------------------------------------------ALILLHDK 106
Query: 167 MVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKL----------- 215
+ A E SS RL+V S++VGC++G+GG VI + +
Sbjct: 107 V--------SAPSEKHHSST---RLVVPSSKVGCIIGEGGKVITDMRRRTGAEIRVYSKA 155
Query: 216 --PTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRD 253
P DE+VQ+ G R AL I+ +L + RD
Sbjct: 156 DKPKYLSFDDELVQVAGPPTIARGALTEIASRLRTRTLRD 195
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%)
Query: 595 VPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQA 654
+P S + I G G L +IRQ+S A++ + + G++E+V+ I GT +Q AAQSL+Q
Sbjct: 427 IPNSSLGSIVGAGGVNLAEIRQVSGARLRLHEAHAGSSESVVEIQGTLDQAKAAQSLLQG 486
Query: 655 FVMSETE 661
F+ + +
Sbjct: 487 FISANSR 493
>gi|356549146|ref|XP_003542958.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
Length = 436
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 169/366 (46%), Gaps = 52/366 (14%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISA 378
FRL+ +VG +IG+ G +I+ +ET I+V++ GT DR+++ISG + +S
Sbjct: 48 FRLIVPVLKVGSIIGRKGELIKKTCEETKARIRVLDGAVGTSDRIVLISGKEDLEAPLSP 107
Query: 379 PQDAVLRVQTRI---ARAIPDNREQTVM---TRLLVASNQIGCLLGKGGSIIAEMRKLSG 432
DAV+RV R+ + N+ V RLLVAS Q L+GK GS+I +++ +G
Sbjct: 108 AMDAVIRVFKRVSGFSEIDAKNKASAVAFCSVRLLVASTQAINLIGKQGSLIKSIQENTG 167
Query: 433 AYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDA-FPSINRPLN 491
A +R+L D++P A+ +E +V + GE V +AL + LR ++ P + N
Sbjct: 168 ASVRVLSGDEVPFYAAADERIVELQGEAMKVLKALEAVVGHLRKFLVDNSVLPLFEKTYN 227
Query: 492 PTFLDQVSPFPSFIGRREL---SPPGMYSNFGPSFHKFDAVGG----------PPPPGSF 538
T + +++ + L S P + ++ P K D++ PP S
Sbjct: 228 ATISQERQADTTWVDKPSLHSASQPSIVTDI-PLSTKRDSLFADRESQLDSLLPPSTMSM 286
Query: 539 HPHDDHSAFMHH--IHRPGMPPHMPDMKPWGPQGLMEVGGPMGFP-DFVGPPHRRVPVVV 595
+ D + + + RP PP + + + + P+ + D +G
Sbjct: 287 YGQDSSLSGLRSSALSRPSAPPIVTTV-------IQTMQIPLSYAEDIIG---------- 329
Query: 596 PRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAF 655
IQG + ++ IR+ S A +T+ + + E ++ I GT Q AQ LIQ
Sbjct: 330 -------IQGTN---IEYIRRTSGAILTVQESRV-PDEIIVEIKGTSSQVQTAQQLIQEV 378
Query: 656 VMSETE 661
+ + TE
Sbjct: 379 ISNHTE 384
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 69/227 (30%)
Query: 42 FPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNK 101
+PG +FR++ PV K+ +IG+ GE++ + ++T IRV + G+ +R+V+I
Sbjct: 42 WPGHCVFRLIVPVLKVGSIIGRKGELIKKTCEETKARIRVLDGAVGTSDRIVLISG---- 97
Query: 102 KETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALL 161
E+LEA + S A++
Sbjct: 98 ---KEDLEAPL-----------------------------------------SPAMDAVI 113
Query: 162 LVFERMVEVEPETEVADQENTKSSKFV-LRLLVLSTQVGCLLGKGGCVIKQI-------- 212
VF+R V +E+ + + F +RLLV STQ L+GK G +IK I
Sbjct: 114 RVFKR---VSGFSEIDAKNKASAVAFCSVRLLVASTQAINLIGKQGSLIKSIQENTGASV 170
Query: 213 -----DKLPTCALASDEVVQITGEVDTVRKALK-LISHQ---LLDNS 250
D++P A A + +V++ GE V KAL+ ++ H L+DNS
Sbjct: 171 RVLSGDEVPFYAAADERIVELQGEAMKVLKALEAVVGHLRKFLVDNS 217
>gi|413944062|gb|AFW76711.1| hypothetical protein ZEAMMB73_249479 [Zea mays]
Length = 426
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 140/296 (47%), Gaps = 42/296 (14%)
Query: 372 PDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLS 431
PD + Q+AVL +QT I PD + + TRLLV +++I C G+ GS+ +++++ +
Sbjct: 156 PDHELFPAQEAVLHIQTHIVDLGPD-MDNIITTRLLVPASEIACFDGREGSL-SDIQRQT 213
Query: 432 GAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLN 491
A ++IL ++ +P CA E++E++ I GE +A + AL Q+TT+LR +R+ P + N
Sbjct: 214 SANVQILPREDLPSCALESDELIQIVGEIKAARNALIQVTTKLRSFLYRE-MPDPIQVGN 272
Query: 492 PTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHI 551
+SP SP G Y G P G++H + H
Sbjct: 273 INLHGAISPVAG-------SPRGPYQ------------GNDIPMGAYHQASQLATSWHSK 313
Query: 552 HRPGMPPHMPDMKPWGPQGLMEVGGPM-------GFPDFVGPPHRR--VPVVVPRSLVPI 602
G G E G + F P R + +V+P S V
Sbjct: 314 DSGG-----------SASGSFEQGSNINDDIRQSATKRFAVPLVTRSTLEIVIPNSAVAS 362
Query: 603 IQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMS 658
+ G+ L QI +IS A +T+ + + + V+ ISGTPEQ A++L+Q F++S
Sbjct: 363 LTMRAGSKLAQISEISGAAVTLAEDRSDILQKVVRISGTPEQASKAENLLQGFILS 418
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 54/103 (52%), Gaps = 21/103 (20%)
Query: 156 VQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCV------- 208
Q+A+L + +V++ P D +N ++ RLLV ++++ C G+ G +
Sbjct: 163 AQEAVLHIQTHIVDLGP-----DMDNIITT----RLLVPASEIACFDGREGSLSDIQRQT 213
Query: 209 -----IKQIDKLPTCALASDEVVQITGEVDTVRKALKLISHQL 246
I + LP+CAL SDE++QI GE+ R AL ++ +L
Sbjct: 214 SANVQILPREDLPSCALESDELIQIVGEIKAARNALIQVTTKL 256
>gi|356505941|ref|XP_003521747.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 443
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 153/366 (41%), Gaps = 53/366 (14%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISA 378
FR+L ++VGG+IG+ G I+ + +ET +K+++ GT R ++IS P +
Sbjct: 46 FRMLVPAQKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTVQRAVMISAKEEPGSSVPP 105
Query: 379 PQDAVLRVQTRIARAI-------PDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLS 431
D +LR+ RI + P V T+LLV ++Q G L+GK G + +++ S
Sbjct: 106 AVDGLLRIHKRIIDGLESDFTHAPSGVAGKVSTKLLVPASQAGSLIGKQGGTVKSIQEAS 165
Query: 432 GAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFF-RDAFPSINRPL 490
+R+LG + +P A +++ VV + G+ V +AL I + LR R P +
Sbjct: 166 NCIVRVLGAEDLPIFALQDDRVVEVVGDPAGVHKALELIASHLRKFLVDRGVIPIFEMNM 225
Query: 491 ---NPTFLDQVSPFPSF-----------------IGRRELSPPGMYSNFGPSFHKFDAVG 530
NP + + P S+ + + PP ++ PS
Sbjct: 226 QTANPHHAEHMPPHQSWGPSQGLPPNVGGGPGFGPPSQYMPPPRQLDSYYPSAEM----- 280
Query: 531 GPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRR 590
PPP PH SA+ + H P + ++ M
Sbjct: 281 --PPPVDRQPHQGISAYGRDA---SIGVHASSNTQSAPSIVTQITQQM------------ 323
Query: 591 VPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQS 650
+P S + G GA + IR+ S A +TI + + E + ISGT Q AQ
Sbjct: 324 ---QIPLSYADAVIGTAGASISYIRRASGATVTIQEARGVPGEMTVEISGTASQVQTAQQ 380
Query: 651 LIQAFV 656
LIQ F+
Sbjct: 381 LIQNFM 386
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 95/218 (43%), Gaps = 62/218 (28%)
Query: 42 FPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNK 101
+PG +FR+L P K+ G+IG+ GE + +I ++T +++ + G+ +R V+I A K
Sbjct: 40 WPGESVFRMLVPAQKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTVQRAVMISA---K 96
Query: 102 KETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALL 161
+E ++ +++ LL
Sbjct: 97 EEPGSSVPPAVD---------------------------------------------GLL 111
Query: 162 LVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI--------- 212
+ +R+++ E++ + + K +LLV ++Q G L+GK G +K I
Sbjct: 112 RIHKRIID-GLESDFTHAPSGVAGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVR 170
Query: 213 ----DKLPTCALASDEVVQITGEVDTVRKALKLISHQL 246
+ LP AL D VV++ G+ V KAL+LI+ L
Sbjct: 171 VLGAEDLPIFALQDDRVVEVVGDPAGVHKALELIASHL 208
>gi|168039902|ref|XP_001772435.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676232|gb|EDQ62717.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 375
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 157/354 (44%), Gaps = 35/354 (9%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISA 378
FRL+ ++VGG+IG+ G ++ + +ET IK++E V GT +R++++S P+ IS
Sbjct: 15 FRLVVPVQKVGGIIGRKGEFVKRMCEETRSRIKILEGVPGTAERIVMVSAREDPEAAISP 74
Query: 379 PQDAVLRVQTRIAR-AIPDNREQT-------VMTRLLVASNQIGCLLGKGGSIIAEMRKL 430
+ +LRV R+ A P++ + V +RLLVA+ Q G L+G+ G+ I ++
Sbjct: 75 AMEGLLRVHRRVIEGAEPESVDAEIAPGGAPVSSRLLVAATQAGSLIGRQGATIKSIQDT 134
Query: 431 SGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFF-RDAFP--SIN 487
SGA +R+L +++P CA ++ VV + G+ VQ A+ + + LR R P +N
Sbjct: 135 SGANVRVLPAEELPLCALADDRVVEVQGDPRNVQRAMELVVSHLRKFLVDRSVLPLFELN 194
Query: 488 RPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAF 547
N + P YS+ +++ G S H
Sbjct: 195 VMANQNNQQSTGSQWQQPSSTQQQQPPSYSSNDSTYYG----GADISHHSQTQQQSHDLA 250
Query: 548 MHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVG-----PPHRRVPVVVPRSLVPI 602
H H M P + GG + P H ++P+ S
Sbjct: 251 NQHHHGVSMYGRDPTL-----------GGSIAPPPPAPVITQVTQHMQIPL----SYADA 295
Query: 603 IQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFV 656
I G GA + +R+ S A ITI + + E + I G+ Q AQ LIQ F+
Sbjct: 296 IIGSAGANISYMRRTSGATITIQETRSVPGEMTVEIHGSASQVQTAQQLIQNFM 349
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 103/222 (46%), Gaps = 69/222 (31%)
Query: 42 FPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNK 101
+PG +FR++ PV K+ G+IG+ GE + ++ ++T I++ E V G+ ER+V++ A
Sbjct: 9 WPGDNVFRLVVPVQKVGGIIGRKGEFVKRMCEETRSRIKILEGVPGTAERIVMVSAR--- 65
Query: 102 KETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALL 161
E+ EA+I S + LL
Sbjct: 66 ----EDPEAAI-----------------------------------------SPAMEGLL 80
Query: 162 LVFERMVE-VEPET---EVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI----- 212
V R++E EPE+ E+A SS RLLV +TQ G L+G+ G IK I
Sbjct: 81 RVHRRVIEGAEPESVDAEIAPGGAPVSS----RLLVAATQAGSLIGRQGATIKSIQDTSG 136
Query: 213 --------DKLPTCALASDEVVQITGEVDTVRKALKLISHQL 246
++LP CALA D VV++ G+ V++A++L+ L
Sbjct: 137 ANVRVLPAEELPLCALADDRVVEVQGDPRNVQRAMELVVSHL 178
>gi|168018585|ref|XP_001761826.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686881|gb|EDQ73267.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 355
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 159/350 (45%), Gaps = 32/350 (9%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISA 378
FRL+ ++VGG+IG+ G ++ + +ET IK++E V GT +R++++S P+ IS
Sbjct: 12 FRLIVPVQKVGGIIGRKGEFVKRMCEETRSRIKILEGVPGTAERIVMVSAREDPEAAISP 71
Query: 379 PQDAVLRVQTRIAR-AIPDNREQT-------VMTRLLVASNQIGCLLGKGGSIIAEMRKL 430
+ +LRV R+ A P++ + V +RLLVA+ Q G L+G+ G+ I ++
Sbjct: 72 AMEGLLRVHRRVIEGAEPESADAEIAPGGAPVSSRLLVAATQAGSLIGRQGATIKSIQDS 131
Query: 431 SGAYIRIL-GKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFF-RDAFP--SI 486
SGA +R+L +++P CA ++ VV + GE VQ A + LR R P +
Sbjct: 132 SGATVRVLPAAEELPLCALADDRVVEVTGEPRNVQRATELVVAHLRKFLVDRSVLPLFEL 191
Query: 487 NRPL-NPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHS 545
NR + N + + + P YS+ S++ G P P
Sbjct: 192 NRAVANQSNQQSTASQWQQPSSTQQQQPPNYSSNDSSYY-----GAAELPHHSQPQQQSH 246
Query: 546 AFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVP--VVVPRSLVPII 603
+H H + P + GG + P P +V + +P S I
Sbjct: 247 DLANHHHGLSLYGRDPTL-----------GGTI-VPPTPAPVITQVTQHMQIPLSYADAI 294
Query: 604 QGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQ 653
G GA + +R+ S A ITI + + E + I G+ Q AQ LIQ
Sbjct: 295 IGGAGANISYMRRTSGATITIQETRSVPGEMTVEIHGSASQVQTAQQLIQ 344
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 104/221 (47%), Gaps = 66/221 (29%)
Query: 42 FPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNK 101
+PG +FR++ PV K+ G+IG+ GE + ++ ++T I++ E V G+ ER+V++ A
Sbjct: 6 WPGDNVFRLIVPVQKVGGIIGRKGEFVKRMCEETRSRIKILEGVPGTAERIVMVSAR--- 62
Query: 102 KETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALL 161
E+ EA+I S M+GL L
Sbjct: 63 ----EDPEAAI----------------------------SPAMEGL-------------L 77
Query: 162 LVFERMVE-VEPETEVADQENTKSSKFVL-RLLVLSTQVGCLLGKGGCVIKQI------- 212
V R++E EPE+ AD E V RLLV +TQ G L+G+ G IK I
Sbjct: 78 RVHRRVIEGAEPES--ADAEIAPGGAPVSSRLLVAATQAGSLIGRQGATIKSIQDSSGAT 135
Query: 213 -------DKLPTCALASDEVVQITGEVDTVRKALKLISHQL 246
++LP CALA D VV++TGE V++A +L+ L
Sbjct: 136 VRVLPAAEELPLCALADDRVVEVTGEPRNVQRATELVVAHL 176
>gi|297735516|emb|CBI17956.3| unnamed protein product [Vitis vinifera]
Length = 433
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 161/375 (42%), Gaps = 64/375 (17%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISA 378
FR+L ++VG +IG+ G I+ L +ET IK+++ GT +R +++S PD I+
Sbjct: 42 FRMLIPVQKVGYIIGRKGEHIKKLSEETKARIKILDGPPGTSERAVMVSAKEEPDAPIAP 101
Query: 379 PQDAVLRVQTRIARA---IPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYI 435
D +LRV I +P V TRLLV + Q G L+GK G+ I +++ S +
Sbjct: 102 AIDGLLRVHKCIMDVESDVPSAAGVMVSTRLLVVAAQAGSLIGKQGATIKSIQEASNCIV 161
Query: 436 RILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSI--------- 486
R+LG++ +P A +N+ VV I GE +V +A+ I + LR + +
Sbjct: 162 RVLGEN-LPLFALQNDTVVEIQGEPASVHKAVELIASNLRKFLVDRSVIKVFEMEMQKPN 220
Query: 487 -----NRPLNPTF-LDQVSPF-----PSFI-GRRELSPPGMYSNFGPSFHKFDAVGGPPP 534
N P ++ QV P P F+ + + PP N+ PP
Sbjct: 221 TQGNENMPPQQSWDPSQVFPINTGGEPGFVPNLQYMQPPYQLDNY------------YPP 268
Query: 535 PGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRV--- 591
P P D H HH P P+G E G + P P + +
Sbjct: 269 PAQT-PLDQH----HHHQGP----------PYG----RETGAGVSSPSLT--PQQSIVNK 307
Query: 592 ---PVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAA 648
+ VP S + G G + +R+ S A I I + K E + I+G+ Q A
Sbjct: 308 ITQYMQVPLSYADAVIGASGVNISYVRRTSGATIAIEETKGVPGEMTVEINGSVSQVQTA 367
Query: 649 QSLIQAFVMSETETT 663
Q LIQ F+ +T
Sbjct: 368 QQLIQNFMAEAASST 382
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 94/217 (43%), Gaps = 65/217 (29%)
Query: 42 FPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNK 101
+PG +FR+L PV K+ +IG+ GE + ++S++T I++ + G+ ER V++ A +
Sbjct: 36 WPGENVFRMLIPVQKVGYIIGRKGEHIKKLSEETKARIKILDGPPGTSERAVMVSAKE-- 93
Query: 102 KETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALL 161
+A +A D LL
Sbjct: 94 ------------------EPDAPIAPAID----------------------------GLL 107
Query: 162 LVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI--------- 212
V + +++VE +D + RLLV++ Q G L+GK G IK I
Sbjct: 108 RVHKCIMDVE-----SDVPSAAGVMVSTRLLVVAAQAGSLIGKQGATIKSIQEASNCIVR 162
Query: 213 ---DKLPTCALASDEVVQITGEVDTVRKALKLISHQL 246
+ LP AL +D VV+I GE +V KA++LI+ L
Sbjct: 163 VLGENLPLFALQNDTVVEIQGEPASVHKAVELIASNL 199
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 6/105 (5%)
Query: 7 PSKRPHDDDNHTE--PNGKEKSQKLAGDYSEN-QPSKSFPGGIMFRVLCPVSKIDGVIGK 63
P++ P D +H + P G+E AG S + P +S I + P+S D VIG
Sbjct: 269 PAQTPLDQHHHHQGPPYGRETG---AGVSSPSLTPQQSIVNKITQYMQVPLSYADAVIGA 325
Query: 64 DGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENL 108
G +S + + +G TI +EET E V I S ++ +T++ L
Sbjct: 326 SGVNISYVRRTSGATIAIEETKGVPGEMTVEINGSVSQVQTAQQL 370
>gi|356573119|ref|XP_003554712.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Glycine max]
Length = 446
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 156/360 (43%), Gaps = 41/360 (11%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISA 378
FR+L ++VGG+IG+ G I+ + +ET +K+++ GT R ++IS P +
Sbjct: 49 FRMLVPAQKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTVQRAVMISAKEEPGSSVPP 108
Query: 379 PQDAVLRVQTRIARAI-------PDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLS 431
D +LRV RI + P V T+LLV ++Q G L+GK G + +++ S
Sbjct: 109 AVDGLLRVHKRIIDGLESDFTHAPSGVAGKVSTKLLVPASQAGSLIGKQGGTVKSIQEAS 168
Query: 432 GAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFF-RDAFPSINRPL 490
+R+LG + +P A +++ VV + G+ V +AL I + LR R P +
Sbjct: 169 NCIVRVLGAEDLPIFALQDDRVVEVVGDPTGVHKALELIASHLRKFLVDRGVIPIFEMNM 228
Query: 491 ---NPTFLDQVSPFPSFIGRRELSPPGM--------YSNFGPSFHKFDAVGGP---PPPG 536
N + + P S+ G + PP + S + P + D+ P PPP
Sbjct: 229 QTANTHHAEHMPPHQSW-GPPQGLPPNVGGGSGFGPPSQYMPPPRQLDSYYPPAEMPPPV 287
Query: 537 SFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVP 596
PH SA+ + H P + ++ M +P
Sbjct: 288 DRQPHQGISAYGRDA---SIGVHASSNTQSAPSIVTQITQQM---------------QIP 329
Query: 597 RSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFV 656
S + G GA + IR+ S A +TI + + E + ISGT Q AQ LIQ F+
Sbjct: 330 LSYADAVIGTAGASISYIRRASGATVTIQEARGVPGEMTVEISGTASQVQTAQQLIQNFM 389
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 95/218 (43%), Gaps = 62/218 (28%)
Query: 42 FPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNK 101
+PG +FR+L P K+ G+IG+ GE + +I ++T +++ + G+ +R V+I A K
Sbjct: 43 WPGESVFRMLVPAQKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTVQRAVMISA---K 99
Query: 102 KETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALL 161
+E ++ +++ LL
Sbjct: 100 EEPGSSVPPAVD---------------------------------------------GLL 114
Query: 162 LVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI--------- 212
V +R+++ E++ + + K +LLV ++Q G L+GK G +K I
Sbjct: 115 RVHKRIID-GLESDFTHAPSGVAGKVSTKLLVPASQAGSLIGKQGGTVKSIQEASNCIVR 173
Query: 213 ----DKLPTCALASDEVVQITGEVDTVRKALKLISHQL 246
+ LP AL D VV++ G+ V KAL+LI+ L
Sbjct: 174 VLGAEDLPIFALQDDRVVEVVGDPTGVHKALELIASHL 211
>gi|348511523|ref|XP_003443293.1| PREDICTED: poly(rC)-binding protein 3-like [Oreochromis niloticus]
Length = 321
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 97/348 (27%), Positives = 153/348 (43%), Gaps = 54/348 (15%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R++ I+GP D
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT--DTIF 71
Query: 377 SAPQDAVLRVQTRIARAI---PDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + + I ++ P + V RL+V ++Q G L+GKGGS I EMR+ +GA
Sbjct: 72 KAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGA 131
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDA-FPSINRPLNP 492
+++ G D +P + E V I+G EA+ + + QI + + A P +P +
Sbjct: 132 QVQVAG-DMLP---NSTERAVTISGTPEAIIQCVRQICVVMLESPPKGATIPYRPKPTST 187
Query: 493 TFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIH 552
+ F G + + G Y+ PH D +H +
Sbjct: 188 PVI--------FSGGQAYTIQGQYA---------------------IPHPDQLTKLHQLA 218
Query: 553 RPGMPPHMPDMKPWGPQGLMEVGGPMGFPDF-VGPPHRRVPVVVPRSLVPIIQGEDGACL 611
P+ P G FP PP + +P L+ I G G +
Sbjct: 219 M--------QQTPFTPLGQTTP----AFPGLDASPPASTHELTIPNDLIGCIIGRQGTKI 266
Query: 612 KQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
+IRQ+S A+I I + G++E I I+GTP AQ LI A + SE
Sbjct: 267 NEIRQMSGAQIKIANAMEGSSERQITITGTPANISLAQYLINARLTSE 314
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 96/210 (45%), Gaps = 39/210 (18%)
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQI------------DKLPTCALASDEVVQITGEVDTVR 236
LRL+V ++Q G L+GKGG IK++ D LP +++ V I+G + +
Sbjct: 102 LRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLPN---STERAVTISGTPEAII 158
Query: 237 KALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPP 296
+ ++ I +L++ P+ +IP P S P+ + S G Y +P P
Sbjct: 159 QCVRQICVVMLESPPKG-ATIPYRPKPTSTPV----IFSGGQAYTIQ----GQYAIPHPD 209
Query: 297 SIPKFHESGVLDRP--------------KPSPEILTFRLLCHDERVGGVIGKGGAIIRSL 342
+ K H+ + P SP T L ++ +G +IG+ G I +
Sbjct: 210 QLTKLHQLAMQQTPFTPLGQTTPAFPGLDASPPASTHELTIPNDLIGCIIGRQGTKINEI 269
Query: 343 KQETGCDIKVMEAVSGTEDRLIVISG-PAH 371
+Q +G IK+ A+ G+ +R I I+G PA+
Sbjct: 270 RQMSGAQIKIANAMEGSSERQITITGTPAN 299
>gi|432931637|ref|XP_004081712.1| PREDICTED: poly(rC)-binding protein 3-like isoform 1 [Oryzias
latipes]
Length = 321
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 97/348 (27%), Positives = 153/348 (43%), Gaps = 54/348 (15%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R++ I+GP D
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT--DTIF 71
Query: 377 SAPQDAVLRVQTRIARAI---PDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + + I ++ P + V RL+V ++Q G L+GKGGS I EMR+ +GA
Sbjct: 72 KAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGA 131
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDA-FPSINRPLNP 492
+++ G D +P + E V I+G EA+ + + QI + + A P +P +
Sbjct: 132 QVQVAG-DMLP---NSTERAVTISGTPEAIIQCVKQICVVMLESPPKGATIPYRPKPAST 187
Query: 493 TFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIH 552
+ F G + + G Y+ PH D +H +
Sbjct: 188 PVI--------FSGGQAYTIQGQYA---------------------IPHPDQLTKLHQLA 218
Query: 553 RPGMPPHMPDMKPWGPQGLMEVGGPMGFPDF-VGPPHRRVPVVVPRSLVPIIQGEDGACL 611
P+ P G FP PP + +P L+ I G G +
Sbjct: 219 M--------QQTPFTPLGQTTP----AFPGLDAAPPASTHELTIPNDLIGCIIGRQGTKI 266
Query: 612 KQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
+IRQ+S A+I I + G++E I I+GTP AQ LI A + SE
Sbjct: 267 NEIRQMSGAQIKIANAMEGSSERQITITGTPANISLAQYLINARLTSE 314
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 96/210 (45%), Gaps = 39/210 (18%)
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQI------------DKLPTCALASDEVVQITGEVDTVR 236
LRL+V ++Q G L+GKGG IK++ D LP +++ V I+G + +
Sbjct: 102 LRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLPN---STERAVTISGTPEAII 158
Query: 237 KALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPP 296
+ +K I +L++ P+ +IP P S P+ + S G Y +P P
Sbjct: 159 QCVKQICVVMLESPPKG-ATIPYRPKPASTPV----IFSGGQAYTIQ----GQYAIPHPD 209
Query: 297 SIPKFHESGVLDRP--------------KPSPEILTFRLLCHDERVGGVIGKGGAIIRSL 342
+ K H+ + P +P T L ++ +G +IG+ G I +
Sbjct: 210 QLTKLHQLAMQQTPFTPLGQTTPAFPGLDAAPPASTHELTIPNDLIGCIIGRQGTKINEI 269
Query: 343 KQETGCDIKVMEAVSGTEDRLIVISG-PAH 371
+Q +G IK+ A+ G+ +R I I+G PA+
Sbjct: 270 RQMSGAQIKIANAMEGSSERQITITGTPAN 299
>gi|147789222|emb|CAN69137.1| hypothetical protein VITISV_022037 [Vitis vinifera]
Length = 587
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 61/160 (38%), Positives = 98/160 (61%), Gaps = 15/160 (9%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
+ FRLLCH R+GGVIGK G I++ L+ +TG I+V ++ S ++ R+I++ PA + RI
Sbjct: 51 VAFRLLCHASRIGGVIGKSGVIVKQLQSDTGARIRVEDSPSTSDHRVILVIAPASVNRRI 110
Query: 377 -----------SAPQDAVLRVQTRI--ARAIPDNR--EQTVMTRLLVASNQIGCLLGKGG 421
SA Q+AVLRV RI A+ D V RLL ++Q+G ++GKGG
Sbjct: 111 ALQGSSEEVEASAAQEAVLRVFERILEVAAVVDGVPPGGVVSCRLLAETSQVGSVIGKGG 170
Query: 422 SIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFE 461
++ ++R+ SG+ I++L +++P CA+ +E+V +G E
Sbjct: 171 KVVEKIRRESGSKIKVLTAEKLPTCAASTDEMVEHSGSLE 210
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 108/227 (47%), Gaps = 59/227 (25%)
Query: 20 PNGKEKSQKLAGDYSENQPSKSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTI 79
PNG K K P G + FR+LC S+I GVIGK G ++ Q+ DTG I
Sbjct: 30 PNGSSKRSK-----PPPPPIPVPAGHVAFRLLCHASRIGGVIGKSGVIVKQLQSDTGARI 84
Query: 80 RVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASVADESDNKKEDSVNE 139
RVE++ S SD R++++ +A S N++
Sbjct: 85 RVEDSPSTSDHRVILV-----------------------------IAPASVNRR------ 109
Query: 140 GSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVG 199
+ + G + E E S Q+A+L VFER++EV + S RLL ++QVG
Sbjct: 110 --IALQGSSEEVEASAAQEAVLRVFERILEVAAVVDGVPPGGVVSC----RLLAETSQVG 163
Query: 200 CLLGKGGCVIKQI-------------DKLPTCALASDEVVQITGEVD 233
++GKGG V+++I +KLPTCA ++DE+V+ +G ++
Sbjct: 164 SVIGKGGKVVEKIRRESGSKIKVLTAEKLPTCAASTDEMVEHSGSLE 210
>gi|410897345|ref|XP_003962159.1| PREDICTED: poly(rC)-binding protein 3-like [Takifugu rubripes]
Length = 321
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 98/351 (27%), Positives = 154/351 (43%), Gaps = 60/351 (17%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R++ I+GP D
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT--DTIF 71
Query: 377 SAPQDAVLRVQTRIARAI---PDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + + I ++ P + V RL+V ++Q G L+GKGGS I EMR+ +GA
Sbjct: 72 KAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGA 131
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDA-FPSINRPLNP 492
+++ G D +P + E V I+G EA+ + + QI + + A P +P +
Sbjct: 132 QVQVAG-DMLP---NSTERAVTISGTPEAIIQCVKQICVVMLESPPKGATIPYRPKPAST 187
Query: 493 TFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIH 552
+ F G + + G Y+ PH D +H +
Sbjct: 188 PVI--------FSGGQAYTIQGQYA---------------------IPHPDQLTKLHQLA 218
Query: 553 RPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVG----PPHRRVPVVVPRSLVPIIQGEDG 608
P+ P G P F G PP + +P L+ I G G
Sbjct: 219 M--------QQTPFTPLG-------QATPAFPGLDASPPASTHELTIPNDLIGCIIGRQG 263
Query: 609 ACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
+ +IRQ+S A+I I + G++E I I+GTP AQ LI A + SE
Sbjct: 264 TKINEIRQMSGAQIKIANAMEGSSERQITITGTPANISLAQYLINARLTSE 314
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 93/206 (45%), Gaps = 38/206 (18%)
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQI------------DKLPTCALASDEVVQITGEVDTVR 236
LRL+V ++Q G L+GKGG IK++ D LP +++ V I+G + +
Sbjct: 102 LRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLPN---STERAVTISGTPEAII 158
Query: 237 KALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPP 296
+ +K I +L++ P+ +IP P S P+ + S G Y +P P
Sbjct: 159 QCVKQICVVMLESPPKG-ATIPYRPKPASTPV----IFSGGQAYTIQ----GQYAIPHPD 209
Query: 297 SIPKFHESGVLDRP--------------KPSPEILTFRLLCHDERVGGVIGKGGAIIRSL 342
+ K H+ + P SP T L ++ +G +IG+ G I +
Sbjct: 210 QLTKLHQLAMQQTPFTPLGQATPAFPGLDASPPASTHELTIPNDLIGCIIGRQGTKINEI 269
Query: 343 KQETGCDIKVMEAVSGTEDRLIVISG 368
+Q +G IK+ A+ G+ +R I I+G
Sbjct: 270 RQMSGAQIKIANAMEGSSERQITITG 295
>gi|147794489|emb|CAN67081.1| hypothetical protein VITISV_007074 [Vitis vinifera]
Length = 534
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 159/380 (41%), Gaps = 74/380 (19%)
Query: 315 EILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDD 374
E + FR+L ++VG +IG+ G I+ + +ET IK+++ GT +R +++S PD
Sbjct: 126 ERVFFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKEEPDS 185
Query: 375 RISAPQDAVLRVQTRIARAIPDNREQT-----VMTRLLVASNQIGCLLGKGGSIIAEMRK 429
+ D +L+V RI + + V TRLLVA++Q G L+GK G + +++
Sbjct: 186 SLPPAMDGLLKVHKRIVDGLEGDSSHMPPGGKVSTRLLVAASQAGSLIGKQGGTVKSIQE 245
Query: 430 LSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRP 489
S +R+LG + +P A +++ VV + GE V +A+ I + LR ++R
Sbjct: 246 ASNCIVRVLGAEDLPIFALQDDRVVEVVGEPIGVHKAVELIASHLRKFL-------VDRS 298
Query: 490 LNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSF----------- 538
+ P F Q+ I R PP + +GP G PP S
Sbjct: 299 VIPLFEMQMQMSNPPIEHR---PP--HQPWGPP-------QGLPPNASGGPGFGPNPPYM 346
Query: 539 ---------------------HPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGP 577
PH SA+ + G H P P + +V
Sbjct: 347 PPPRQLDSYYPPPELPPPVEKQPHQGISAYGREVPMGG---HAPSSAQPAPSMITQVTQQ 403
Query: 578 MGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVII 637
M +P S + G GA + IR+ S A +TI + + E +
Sbjct: 404 MQ---------------IPLSYADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVE 448
Query: 638 ISGTPEQTHAAQSLIQAFVM 657
I+GT Q AAQ LIQA +
Sbjct: 449 INGTASQVQAAQQLIQALFL 468
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 99/255 (38%), Gaps = 83/255 (32%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
+ FR+L P K+ +IG+ GE + +I ++T I++ + G+ ER V++ A K+E
Sbjct: 128 VFFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSA---KEEPD 184
Query: 106 ENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFE 165
+L + MDGL L V +
Sbjct: 185 SSLPPA--------------------------------MDGL-------------LKVHK 199
Query: 166 RMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI------------- 212
R+V+ E K RLLV ++Q G L+GK G +K I
Sbjct: 200 RIVD---GLEGDSSHMPPGGKVSTRLLVAASQAGSLIGKQGGTVKSIQEASNCIVRVLGA 256
Query: 213 DKLPTCALASDEVVQITGEVDTVRKALKLISHQL------------------LDNSPRDH 254
+ LP AL D VV++ GE V KA++LI+ L + N P +H
Sbjct: 257 EDLPIFALQDDRVVEVVGEPIGVHKAVELIASHLRKFLVDRSVIPLFEMQMQMSNPPIEH 316
Query: 255 ESIPGNPTGPSHPLP 269
P P GP LP
Sbjct: 317 RP-PHQPWGPPQGLP 330
>gi|384248562|gb|EIE22046.1| hypothetical protein COCSUDRAFT_43031 [Coccomyxa subellipsoidea
C-169]
Length = 243
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 83/139 (59%), Gaps = 2/139 (1%)
Query: 318 TFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRIS 377
+RLL ++VG VIGK G I+++++ ETG I+V+E V ++R+IVIS +
Sbjct: 104 VYRLLVQSKKVGSVIGKAGTIVKAIRDETGARIRVVEGVPNCDERVIVISARSDAARHTD 163
Query: 378 APQDAVLRVQTRI--ARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYI 435
A Q+A+ +V R+ P TR+LV Q GCL+GK G+II E+R+ SGA+I
Sbjct: 164 AAQEALFKVHARVHEHEEGPHPPPANATTRMLVCHTQAGCLIGKAGAIIKEIREASGAHI 223
Query: 436 RILGKDQIPKCASENEEVV 454
+IL + +P C N+ VV
Sbjct: 224 KILPAEDLPPCGLSNDRVV 242
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 77/195 (39%), Gaps = 69/195 (35%)
Query: 47 MFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEA-SDNKKETS 105
++R+L K+ VIGK G ++ I +TG IRV E V DER++VI A SD + T
Sbjct: 104 VYRLLVQSKKVGSVIGKAGTIVKAIRDETGARIRVVEGVPNCDERVIVISARSDAARHT- 162
Query: 106 ENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFE 165
D+ E AL V
Sbjct: 163 -----------------------------DAAQE-------------------ALFKVHA 174
Query: 166 RMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI------------- 212
R+ E E + + + R+LV TQ GCL+GK G +IK+I
Sbjct: 175 RVHEHE------EGPHPPPANATTRMLVCHTQAGCLIGKAGAIIKEIREASGAHIKILPA 228
Query: 213 DKLPTCALASDEVVQ 227
+ LP C L++D VVQ
Sbjct: 229 EDLPPCGLSNDRVVQ 243
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 54/99 (54%), Gaps = 21/99 (21%)
Query: 395 PDNREQTV----------MTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIP 444
PD + Q + + RLLV S ++G ++GK G+I+ +R +GA IR++ + +P
Sbjct: 86 PDAKRQAIGAAEGPQTETVYRLLVQSKKVGSVIGKAGTIVKAIRDETGARIRVV--EGVP 143
Query: 445 KCASENEEVVLINGE------FEAVQEALFQITTRLRHH 477
C +E V++I+ +A QEALF++ R+ H
Sbjct: 144 NC---DERVIVISARSDAARHTDAAQEALFKVHARVHEH 179
>gi|426218399|ref|XP_004003434.1| PREDICTED: poly(rC)-binding protein 3 isoform 3 [Ovis aries]
Length = 336
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 101/364 (27%), Positives = 160/364 (43%), Gaps = 69/364 (18%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R++ I+GP
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT------ 65
Query: 377 SAPQDAVLRVQTRIARAI-----------PDNREQTVMTRLLVASNQIGCLLGKGGSIIA 425
DA+ + IA P + V RL+V ++Q G L+GKGGS I
Sbjct: 66 ----DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 121
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPS 485
E+R+ +GA +++ G D +P + E V I+G +A+ + + QI + +
Sbjct: 122 EIRESTGAQVQVAG-DMLP---NSTERAVTISGTPDAIIQCVKQICVVMLEVQSKSPPRG 177
Query: 486 INRPLNPTFLDQVSPFPS-----FIGRRELSPPGMYSNFGPSFHKFDAVGGP----PPPG 536
++R V+P P+ F G + + G Y+ P K + PP G
Sbjct: 178 VSR--------VVAPKPASTPVIFAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLG 229
Query: 537 SFHPHDDHSAFMHHIHRPGMPPHMPDMK-PWGPQGLMEVGGPMGFPDFVGPPHRRVPVVV 595
+P AF PG +P ++ PW PP + +
Sbjct: 230 QTNP-----AF------PGTDRAVPFVRSPWACLD-------------ASPPASTHELTI 265
Query: 596 PRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAF 655
P L+ I G G + +IRQ+S A+I I + G++E I I+GTP AQ LI A
Sbjct: 266 PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINAR 325
Query: 656 VMSE 659
+ SE
Sbjct: 326 LTSE 329
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 97/218 (44%), Gaps = 45/218 (20%)
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQI------------DKLPTCALASDEVVQITGEVDTVR 236
LRL+V ++Q G L+GKGG IK+I D LP +++ V I+G D +
Sbjct: 100 LRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN---STERAVTISGTPDAII 156
Query: 237 KALKLISHQLLD---NSPRDHESIPGNPTGPSHPL---PDHSVSSQGAPYATGHRDVADI 290
+ +K I +L+ SP S P S P+ + + QG YA H D+ +
Sbjct: 157 QCVKQICVVMLEVQSKSPPRGVSRVVAPKPASTPVIFAGGQAYTIQGQ-YAIPHPDLTKL 215
Query: 291 H------LPMPP---SIPKFHESGVLDRPKP-----------SPEILTFRLLCHDERVGG 330
H P PP + P F + DR P SP T L ++ +G
Sbjct: 216 HQLAMQQTPFPPLGQTNPAFPGT---DRAVPFVRSPWACLDASPPASTHELTIPNDLIGC 272
Query: 331 VIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
+IG+ G I ++Q +G IK+ A G+ +R I I+G
Sbjct: 273 IIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITG 310
>gi|193248243|dbj|BAC04327.2| unnamed protein product [Homo sapiens]
Length = 319
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 152/356 (42%), Gaps = 70/356 (19%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R++ I+GP
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT------ 65
Query: 377 SAPQDAVLRVQTRIARAI-----------PDNREQTVMTRLLVASNQIGCLLGKGGSIIA 425
DA+ + IA P + V RL+V ++Q G L+GKGGS I
Sbjct: 66 ----DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 121
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDA-FP 484
E+R+ +GA +++ G D +P + E V I+G +A+ + + QI + + A P
Sbjct: 122 EIRESTGAQVQVAG-DMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIP 177
Query: 485 SINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDH 544
+P + + F G + + G Y+ PH D
Sbjct: 178 YRPKPASTPVI--------FAGGQAYTIQGQYA---------------------IPHPDQ 208
Query: 545 SAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDF-VGPPHRRVPVVVPRSLVPII 603
+H + P P + P FP PP + +P L+ I
Sbjct: 209 LTKLHQLAMQQTP--FPPLGQTNP----------AFPGLDASPPASTHELTIPNDLIGCI 256
Query: 604 QGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
G G + +IRQ+S A+I I + G++E I I+GTP AQ LI A + SE
Sbjct: 257 IGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARLTSE 312
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 96/210 (45%), Gaps = 39/210 (18%)
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQI------------DKLPTCALASDEVVQITGEVDTVR 236
LRL+V ++Q G L+GKGG IK+I D LP +++ V I+G D +
Sbjct: 100 LRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN---STERAVTISGTPDAII 156
Query: 237 KALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPP 296
+ +K I +L++ P+ +IP P S P+ + + G Y +P P
Sbjct: 157 QCVKQICVVMLESPPKG-ATIPYRPKPASTPV----IFAGGQAYTIQ----GQYAIPHPD 207
Query: 297 SIPKFHESGVLDRPKP--------------SPEILTFRLLCHDERVGGVIGKGGAIIRSL 342
+ K H+ + P P SP T L ++ +G +IG+ G I +
Sbjct: 208 QLTKLHQLAMQQTPFPPLGQTNPAFPGLDASPPASTHELTIPNDLIGCIIGRQGTKINEI 267
Query: 343 KQETGCDIKVMEAVSGTEDRLIVISG-PAH 371
+Q +G IK+ A G+ +R I I+G PA+
Sbjct: 268 RQMSGAQIKIANATEGSSERQITITGTPAN 297
>gi|291414465|ref|XP_002723480.1| PREDICTED: poly(rC) binding protein 2-like [Oryctolagus cuniculus]
Length = 319
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 154/355 (43%), Gaps = 68/355 (19%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R++ I+GP
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT------ 65
Query: 377 SAPQDAVLRVQTRIARAI-----------PDNREQTVMTRLLVASNQIGCLLGKGGSIIA 425
DA+ + IA P + V RL+V ++Q G L+GKGGS I
Sbjct: 66 ----DAIFKAFAMIAYKFEEDIISSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 121
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDA-FP 484
E+R+ +GA +++ G D +P + E V I+G +A+ + + QI + + A P
Sbjct: 122 EIRESTGAQVQVAG-DMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIP 177
Query: 485 SINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDH 544
+P + + F G + + G Y+ PH D
Sbjct: 178 YRPKPASTPVI--------FAGGQAYTIQGQYA---------------------IPHPD- 207
Query: 545 SAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQ 604
+ +H+ M P+ P G P G PP + +P L+ I
Sbjct: 208 ---LTKLHQLAM-----QQTPFPPLGQTNPAFPAGLD--ASPPASTHELTIPNDLIGCII 257
Query: 605 GEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
G G + +IRQ+S A+I I + G++E I I+GTP AQ LI A + SE
Sbjct: 258 GRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARLTSE 312
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 112/240 (46%), Gaps = 35/240 (14%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI 212
T + KA ++ + E + + +++ T LRL+V ++Q G L+GKGG IK+I
Sbjct: 65 TDAIFKAFAMIAYKFEE-DIISSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 213 ------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGN 260
D LP +++ V I+G D + + +K I +L++ P+ +IP
Sbjct: 124 RESTGAQVQVAGDMLPN---STERAVTISGTPDAIIQCVKQICVVMLESPPKG-ATIPYR 179
Query: 261 PTGPSHPL---PDHSVSSQGAPYATGHRDVADIH------LPMPP---SIPKFHESGVLD 308
P S P+ + + QG YA H D+ +H P PP + P F LD
Sbjct: 180 PKPASTPVIFAGGQAYTIQGQ-YAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPAG--LD 236
Query: 309 RPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
SP T L ++ +G +IG+ G I ++Q +G IK+ A G+ +R I I+G
Sbjct: 237 A---SPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITG 293
>gi|431893776|gb|ELK03594.1| Poly(rC)-binding protein 3 [Pteropus alecto]
Length = 339
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 101/368 (27%), Positives = 156/368 (42%), Gaps = 74/368 (20%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ ++ E+G I + E +R++ I+GP
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMRDESGARINISEG--NCPERIVTITGPT------ 65
Query: 377 SAPQDAVLRVQTRIARAI-----------PDNREQTVMTRLLVASNQIGCLLGKGGSIIA 425
DA+ + IA P + V RL+V ++Q G L+GKGGS I
Sbjct: 66 ----DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 121
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDA-FP 484
E+R+ +GA +++ G D +P + E V I+G +A+ + + QI + + A P
Sbjct: 122 EIRESTGAQVQVAG-DMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIP 177
Query: 485 SINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDH 544
+P + + F G + + G Y+ PH D
Sbjct: 178 YRPKPASTPVI--------FAGGQAYTIQGQYA---------------------IPHPDQ 208
Query: 545 SAFMHHIHRPGMP-PHMPDMKPWGP------------QGLMEVGGPMGFPDFVGPPHRRV 591
+H + P P + P P Q LM G P G PP
Sbjct: 209 LTKLHQLAMQQTPFPPLGQTNPAFPGEKLSLHSSEEAQNLM--GQPSGLD--ASPPASTH 264
Query: 592 PVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSL 651
+ +P L+ I G G + +IRQ+S A+I I + G++E I I+GTP AQ L
Sbjct: 265 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYL 324
Query: 652 IQAFVMSE 659
I A + SE
Sbjct: 325 INARLTSE 332
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 101/221 (45%), Gaps = 44/221 (19%)
Query: 187 FVLRLLVLSTQVGCLLGKGGCVIKQI------------DKLPTCALASDEVVQITGEVDT 234
LRL+V ++Q G L+GKGG IK+I D LP +++ V I+G D
Sbjct: 98 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN---STERAVTISGTPDA 154
Query: 235 VRKALKLISHQLLDNSPRDHESIPGNPTGPSHPL---PDHSVSSQGAPYATGHRD----- 286
+ + +K I +L++ P+ +IP P S P+ + + QG YA H D
Sbjct: 155 IIQCVKQICVVMLESPPKG-ATIPYRPKPASTPVIFAGGQAYTIQGQ-YAIPHPDQLTKL 212
Query: 287 --VADIHLPMPP---SIPKF-------HES----GVLDRPK---PSPEILTFRLLCHDER 327
+A P PP + P F H S ++ +P SP T L ++
Sbjct: 213 HQLAMQQTPFPPLGQTNPAFPGEKLSLHSSEEAQNLMGQPSGLDASPPASTHELTIPNDL 272
Query: 328 VGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
+G +IG+ G I ++Q +G IK+ A G+ +R I I+G
Sbjct: 273 IGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITG 313
>gi|58865460|ref|NP_001011945.1| poly(rC)-binding protein 3 [Rattus norvegicus]
gi|50927011|gb|AAH79196.1| Poly(rC) binding protein 3 [Rattus norvegicus]
Length = 319
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 152/356 (42%), Gaps = 70/356 (19%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R++ I+GP
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT------ 65
Query: 377 SAPQDAVLRVQTRIARAI-----------PDNREQTVMTRLLVASNQIGCLLGKGGSIIA 425
DA+ + IA P + V RL+V ++Q G L+GKGGS I
Sbjct: 66 ----DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 121
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDA-FP 484
E+R+ +GA +++ G D +P + E V I+G +A+ + + QI + + A P
Sbjct: 122 EIRESTGAQVQVAG-DMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIP 177
Query: 485 SINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDH 544
+P + + F G + + G Y+ PH D
Sbjct: 178 YRPKPASTPVI--------FAGGQAYTIQGQYA---------------------IPHPDQ 208
Query: 545 SAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDF-VGPPHRRVPVVVPRSLVPII 603
+H + P P + P FP PP + +P L+ I
Sbjct: 209 LTKLHQLAMQQTP--FPPLGQTNP----------AFPGLDASPPASTHELTIPNDLIGCI 256
Query: 604 QGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
G G + +IRQ+S A+I I + G++E I I+GTP AQ LI A + SE
Sbjct: 257 IGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARLTSE 312
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 93/206 (45%), Gaps = 38/206 (18%)
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQI------------DKLPTCALASDEVVQITGEVDTVR 236
LRL+V ++Q G L+GKGG IK+I D LP +++ V I+G D +
Sbjct: 100 LRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN---STERAVTISGTPDAII 156
Query: 237 KALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPP 296
+ +K I +L++ P+ +IP P S P+ + + G Y +P P
Sbjct: 157 QCVKQICVVMLESPPKG-ATIPYRPKPASTPV----IFAGGQAYTIQ----GQYAIPHPD 207
Query: 297 SIPKFHESGVLDRPKP--------------SPEILTFRLLCHDERVGGVIGKGGAIIRSL 342
+ K H+ + P P SP T L ++ +G +IG+ G I +
Sbjct: 208 QLTKLHQLAMQQTPFPPLGQTNPAFPGLDASPPASTHELTIPNDLIGCIIGRQGTKINEI 267
Query: 343 KQETGCDIKVMEAVSGTEDRLIVISG 368
+Q +G IK+ A G+ +R I I+G
Sbjct: 268 RQMSGAQIKIANATEGSSERQITITG 293
>gi|114684793|ref|XP_001157578.1| PREDICTED: poly(rC)-binding protein 3 isoform 2 [Pan troglodytes]
gi|397506694|ref|XP_003823856.1| PREDICTED: poly(rC)-binding protein 3 isoform 2 [Pan paniscus]
gi|426393343|ref|XP_004062984.1| PREDICTED: poly(rC)-binding protein 3 [Gorilla gorilla gorilla]
Length = 351
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 152/356 (42%), Gaps = 70/356 (19%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R++ I+GP
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT------ 97
Query: 377 SAPQDAVLRVQTRIARAI-----------PDNREQTVMTRLLVASNQIGCLLGKGGSIIA 425
DA+ + IA P + V RL+V ++Q G L+GKGGS I
Sbjct: 98 ----DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 153
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDA-FP 484
E+R+ +GA +++ G D +P + E V I+G +A+ + + QI + + A P
Sbjct: 154 EIRESTGAQVQVAG-DMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIP 209
Query: 485 SINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDH 544
+P + + F G + + G Y+ PH D
Sbjct: 210 YRPKPASTPVI--------FAGGQAYTIQGQYA---------------------IPHPDQ 240
Query: 545 SAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDF-VGPPHRRVPVVVPRSLVPII 603
+H + P P + P FP PP + +P L+ I
Sbjct: 241 LTKLHQLAMQQTP--FPPLGQTNP----------AFPGLDASPPASTHELTIPNDLIGCI 288
Query: 604 QGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
G G + +IRQ+S A+I I + G++E I I+GTP AQ LI A + SE
Sbjct: 289 IGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARLTSE 344
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 106/242 (43%), Gaps = 39/242 (16%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI 212
T + KA ++ + E + +++ T LRL+V ++Q G L+GKGG IK+I
Sbjct: 97 TDAIFKAFAMIAYKFEE-DIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 155
Query: 213 ------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGN 260
D LP +++ V I+G D + + +K I +L++ P+ +IP
Sbjct: 156 RESTGAQVQVAGDMLPN---STERAVTISGTPDAIIQCVKQICVVMLESPPKG-ATIPYR 211
Query: 261 PTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKP-------- 312
P S P+ + + G Y +P P + K H+ + P P
Sbjct: 212 PKPASTPV----IFAGGQAYTIQ----GQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPA 263
Query: 313 ------SPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVI 366
SP T L ++ +G +IG+ G I ++Q +G IK+ A G+ +R I I
Sbjct: 264 FPGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITI 323
Query: 367 SG 368
+G
Sbjct: 324 TG 325
>gi|357121091|ref|XP_003562255.1| PREDICTED: poly(rC)-binding protein 1-like [Brachypodium
distachyon]
Length = 518
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 100/376 (26%), Positives = 154/376 (40%), Gaps = 73/376 (19%)
Query: 318 TFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRIS 377
FR+L +VG +IG+ G I+ + +E+ IK+++ G +R ++IS PD++IS
Sbjct: 115 VFRILVPVHKVGAIIGRKGEFIKRMCEESKARIKILDGPPGVPERAVMISAKDEPDEQIS 174
Query: 378 APQDAVLRVQTRIARAIPDNREQTVM-------TRLLVASNQIGCLLGKGGSIIAEMRKL 430
D +LR+ RIA QT TRLLV ++Q G L+GK G+ I ++
Sbjct: 175 PAMDGLLRIHKRIADGSDGEFGQTQRGTGTMGPTRLLVPASQAGSLIGKQGATIKSIQDS 234
Query: 431 SGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFF-RDAFPSINRP 489
S A +RI+ + +P A ++ VV I GE +VQ+A+ I + LR P +
Sbjct: 235 SKAVVRIV--ENVPPVALNDDRVVEIQGEPLSVQKAVELIASHLRKFLVDHSVLPLFEQQ 292
Query: 490 LNPTFLDQVSPFPS----------------------FIGRRELSPPGMYSNFGPSFHKFD 527
+ + + P P+ + G + PP N+ P
Sbjct: 293 MKMHSMPREQPMPAPQQWGPPQPWGPPPNHPPGGPGYAGNPQFMPPRPQDNYYP------ 346
Query: 528 AVGGPP--PPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVG 585
PP PP PH SA+ P G+ G
Sbjct: 347 ----PPDVPPMEKQPHYGISAYGRE----------------APSGVSASGN--------Q 378
Query: 586 PPHRRVPVV-----VPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISG 640
PP V +P S + G GA + IR+ S A +TI + + E + I G
Sbjct: 379 PPSHVASQVTHNMQIPLSYADAVIGAAGASISYIRRHSGAAVTIQESRGAPGEMNVEIIG 438
Query: 641 TPEQTHAAQSLIQAFV 656
+ Q AQ LIQ F+
Sbjct: 439 SASQVQTAQQLIQNFM 454
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 105/247 (42%), Gaps = 62/247 (25%)
Query: 11 PHDDDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQ 70
P+ ++N NG+ K Q + ++ +PG +FR+L PV K+ +IG+ GE + +
Sbjct: 81 PYQEENAF--NGEVKQQDNLQVEANDKRWPGWPGDSVFRILVPVHKVGAIIGRKGEFIKR 138
Query: 71 ISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASVADESD 130
+ +++ I++ + G ER V+I A D E
Sbjct: 139 MCEESKARIKILDGPPGVPERAVMISAKDEPDE--------------------------- 171
Query: 131 NKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLR 190
+ S MDGL L + +R+ + + E + + R
Sbjct: 172 --------QISPAMDGL-------------LRIHKRIADGS-DGEFGQTQRGTGTMGPTR 209
Query: 191 LLVLSTQVGCLLGKGGCVIKQI-----------DKLPTCALASDEVVQITGEVDTVRKAL 239
LLV ++Q G L+GK G IK I + +P AL D VV+I GE +V+KA+
Sbjct: 210 LLVPASQAGSLIGKQGATIKSIQDSSKAVVRIVENVPPVALNDDRVVEIQGEPLSVQKAV 269
Query: 240 KLISHQL 246
+LI+ L
Sbjct: 270 ELIASHL 276
>gi|403297205|ref|XP_003939469.1| PREDICTED: poly(rC)-binding protein 3 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 351
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 152/356 (42%), Gaps = 70/356 (19%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R++ I+GP
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT------ 97
Query: 377 SAPQDAVLRVQTRIARAI-----------PDNREQTVMTRLLVASNQIGCLLGKGGSIIA 425
DA+ + IA P + V RL+V ++Q G L+GKGGS I
Sbjct: 98 ----DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 153
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDA-FP 484
E+R+ +GA +++ G D +P + E V I+G +A+ + + QI + + A P
Sbjct: 154 EIRESTGAQVQVAG-DMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIP 209
Query: 485 SINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDH 544
+P + + F G + + G Y+ PH D
Sbjct: 210 YRPKPASTPVI--------FAGGQAYTIQGQYA---------------------IPHPDQ 240
Query: 545 SAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDF-VGPPHRRVPVVVPRSLVPII 603
+H + P P + P FP PP + +P L+ I
Sbjct: 241 LTKLHQLAMQQTP--FPPLGQTNP----------AFPGLDASPPASTHELTIPNDLIGCI 288
Query: 604 QGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
G G + +IRQ+S A+I I + G++E I I+GTP AQ LI A + SE
Sbjct: 289 IGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARLTSE 344
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 106/242 (43%), Gaps = 39/242 (16%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI 212
T + KA ++ + E + +++ T LRL+V ++Q G L+GKGG IK+I
Sbjct: 97 TDAIFKAFAMIAYKFEE-DIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 155
Query: 213 ------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGN 260
D LP +++ V I+G D + + +K I +L++ P+ +IP
Sbjct: 156 RESTGAQVQVAGDMLPN---STERAVTISGTPDAIIQCVKQICVVMLESPPKG-ATIPYR 211
Query: 261 PTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKP-------- 312
P S P+ + + G Y +P P + K H+ + P P
Sbjct: 212 PKPASTPV----IFAGGQAYTIQ----GQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPA 263
Query: 313 ------SPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVI 366
SP T L ++ +G +IG+ G I ++Q +G IK+ A G+ +R I I
Sbjct: 264 FPGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITI 323
Query: 367 SG 368
+G
Sbjct: 324 TG 325
>gi|147817258|emb|CAN62067.1| hypothetical protein VITISV_030085 [Vitis vinifera]
Length = 288
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 98/185 (52%), Gaps = 43/185 (23%)
Query: 314 PEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG----- 368
P++L FR+LC + GGVIGKGGAIIR +++TG I++ ++V G ++R+I+I
Sbjct: 98 PQVL-FRILCPATKTGGVIGKGGAIIRQFREDTGAKIRIDDSVLGCDERVILIVADAVKS 156
Query: 369 ---------------------------PAHPDDRISAP-QDAVLRVQTRIARA------- 393
P DD S+P Q A++RV RI +
Sbjct: 157 KREASAICGAEANDGEESANLRNSSPNPVAVDDDESSPAQQALVRVFERILKVDEEREEK 216
Query: 394 --IPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENE 451
D V RLL SNQ+GC+LG+GG I+ ++R+ SGA IR+L KD IP CAS +
Sbjct: 217 EKKEDLGNVAVCCRLLAPSNQVGCVLGRGGKIVEKIRQESGAQIRVLPKDHIPACASPGD 276
Query: 452 EVVLI 456
E++ +
Sbjct: 277 ELIQV 281
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 111/200 (55%), Gaps = 33/200 (16%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDER--LVVIEASDNKKE 103
++FR+LCP +K GVIGK G ++ Q +DTG IR++++V G DER L+V +A +K+E
Sbjct: 100 VLFRILCPATKTGGVIGKGGAIIRQFREDTGAKIRIDDSVLGCDERVILIVADAVKSKRE 159
Query: 104 TSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLV 163
S A N+G E A++ + S N V +D + E+S Q+AL+ V
Sbjct: 160 ASAICGA----EANDGEESANLRNSSPN---------PVAVD----DDESSPAQQALVRV 202
Query: 164 FERMVEVE-PETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI---------- 212
FER+++V+ E +E+ + RLL S QVGC+LG+GG ++++I
Sbjct: 203 FERILKVDEEREEKEKKEDLGNVAVCCRLLAPSNQVGCVLGRGGKIVEKIRQESGAQIRV 262
Query: 213 ---DKLPTCALASDEVVQIT 229
D +P CA DE++Q+
Sbjct: 263 LPKDHIPACASPGDELIQVV 282
>gi|119629730|gb|EAX09325.1| poly(rC) binding protein 3, isoform CRA_c [Homo sapiens]
Length = 370
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 104/361 (28%), Positives = 161/361 (44%), Gaps = 61/361 (16%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R++ I+GP
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT------ 97
Query: 377 SAPQDAVLRVQTRIARAI-----------PDNREQTVMTRLLVASNQIGCLLGKGGSIIA 425
DA+ + IA P + V RL+V ++Q G L+GKGGS I
Sbjct: 98 ----DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 153
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDA-FP 484
E+R+ +GA +++ G D +P + E V I+G +A+ + + QI + + A P
Sbjct: 154 EIRESTGAQVQVAG-DMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIP 209
Query: 485 SINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGP----PPPGSFHP 540
+P + + F G + + G Y+ P K + PP G +P
Sbjct: 210 YRPKPASTPVI--------FAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNP 261
Query: 541 HDDHSAFMHHIHRPG--MPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRS 598
AF PG +P H + Q LM G G PP + +P
Sbjct: 262 -----AF------PGEKLPLHSSEEA----QNLM--GQSSGLD--ASPPASTHELTIPND 302
Query: 599 LVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMS 658
L+ I G G + +IRQ+S A+I I + G++E I I+GTP AQ LI A + S
Sbjct: 303 LIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARLTS 362
Query: 659 E 659
E
Sbjct: 363 E 363
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 112/254 (44%), Gaps = 44/254 (17%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI 212
T + KA ++ + E + +++ T LRL+V ++Q G L+GKGG IK+I
Sbjct: 97 TDAIFKAFAMIAYKFEE-DIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 155
Query: 213 ------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGN 260
D LP +++ V I+G D + + +K I +L++ P+ +IP
Sbjct: 156 RESTGAQVQVAGDMLPN---STERAVTISGTPDAIIQCVKQICVVMLESPPKG-ATIPYR 211
Query: 261 PTGPSHPL---PDHSVSSQGAPYATGHRDVADIH------LPMPP---SIPKF------- 301
P S P+ + + QG YA H D+ +H P PP + P F
Sbjct: 212 PKPASTPVIFAGGQAYTIQGQ-YAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPL 270
Query: 302 HES-------GVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVME 354
H S G SP T L ++ +G +IG+ G I ++Q +G IK+
Sbjct: 271 HSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN 330
Query: 355 AVSGTEDRLIVISG 368
A G+ +R I I+G
Sbjct: 331 ATEGSSERQITITG 344
>gi|26330216|dbj|BAC28838.1| unnamed protein product [Mus musculus]
Length = 370
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 104/361 (28%), Positives = 161/361 (44%), Gaps = 61/361 (16%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R++ I+GP
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT------ 97
Query: 377 SAPQDAVLRVQTRIARAI-----------PDNREQTVMTRLLVASNQIGCLLGKGGSIIA 425
DA+ + IA P + V RL+V ++Q G L+GKGGS I
Sbjct: 98 ----DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 153
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDA-FP 484
E+R+ +GA +++ G D +P + E V I+G +A+ + + QI + + A P
Sbjct: 154 EIRESTGAQVQVAG-DMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIP 209
Query: 485 SINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGP----PPPGSFHP 540
+P + + F G + + G Y+ P K + PP G +P
Sbjct: 210 YRPKPASTPVI--------FAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNP 261
Query: 541 HDDHSAFMHHIHRPG--MPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRS 598
AF PG +P H + Q LM G G PP + +P
Sbjct: 262 -----AF------PGEKLPLHSSEEA----QNLM--GQSSGLD--ASPPASTHELTIPND 302
Query: 599 LVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMS 658
L+ I G G + +IRQ+S A+I I + G++E I I+GTP AQ LI A + S
Sbjct: 303 LIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARLTS 362
Query: 659 E 659
E
Sbjct: 363 E 363
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 112/254 (44%), Gaps = 44/254 (17%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI 212
T + KA ++ + E + +++ T LRL+V ++Q G L+GKGG IK+I
Sbjct: 97 TDAIFKAFAMIAYKFEE-DIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 155
Query: 213 ------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGN 260
D LP +++ V I+G D + + +K I +L++ P+ +IP
Sbjct: 156 RESTGAQVQVAGDMLPN---STERAVTISGTPDAIIQCVKQICVVMLESPPKG-ATIPYR 211
Query: 261 PTGPSHPL---PDHSVSSQGAPYATGHRDVADIH------LPMPP---SIPKF------- 301
P S P+ + + QG YA H D+ +H P PP + P F
Sbjct: 212 PKPASTPVIFAGGQAYTIQGQ-YAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPL 270
Query: 302 HES-------GVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVME 354
H S G SP T L ++ +G +IG+ G I ++Q +G IK+
Sbjct: 271 HSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN 330
Query: 355 AVSGTEDRLIVISG 368
A G+ +R I I+G
Sbjct: 331 ATEGSSERQITITG 344
>gi|109065035|ref|XP_001099540.1| PREDICTED: poly(rC)-binding protein 3-like isoform 4 [Macaca
mulatta]
Length = 370
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 104/361 (28%), Positives = 161/361 (44%), Gaps = 61/361 (16%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R++ I+GP
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT------ 97
Query: 377 SAPQDAVLRVQTRIARAI-----------PDNREQTVMTRLLVASNQIGCLLGKGGSIIA 425
DA+ + IA P + V RL+V ++Q G L+GKGGS I
Sbjct: 98 ----DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 153
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDA-FP 484
E+R+ +GA +++ G D +P + E V I+G +A+ + + QI + + A P
Sbjct: 154 EIRESTGAQVQVAG-DMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIP 209
Query: 485 SINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGP----PPPGSFHP 540
+P + + F G + + G Y+ P K + PP G +P
Sbjct: 210 YRPKPASTPVI--------FAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNP 261
Query: 541 HDDHSAFMHHIHRPG--MPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRS 598
AF PG +P H + Q LM G G PP + +P
Sbjct: 262 -----AF------PGEKLPLHSSEEA----QNLM--GQSSGLD--ASPPASTHELTIPND 302
Query: 599 LVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMS 658
L+ I G G + +IRQ+S A+I I + G++E I I+GTP AQ LI A + S
Sbjct: 303 LIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARLTS 362
Query: 659 E 659
E
Sbjct: 363 E 363
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 112/254 (44%), Gaps = 44/254 (17%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI 212
T + KA ++ + E + +++ T LRL+V ++Q G L+GKGG IK+I
Sbjct: 97 TDAIFKAFAMIAYKFEE-DIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 155
Query: 213 ------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGN 260
D LP +++ V I+G D + + +K I +L++ P+ +IP
Sbjct: 156 RESTGAQVQVAGDMLPN---STERAVTISGTPDAIIQCVKQICVVMLESPPKG-ATIPYR 211
Query: 261 PTGPSHPL---PDHSVSSQGAPYATGHRDVADIH------LPMPP---SIPKF------- 301
P S P+ + + QG YA H D+ +H P PP + P F
Sbjct: 212 PKPASTPVIFAGGQAYTIQGQ-YAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPL 270
Query: 302 HES-------GVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVME 354
H S G SP T L ++ +G +IG+ G I ++Q +G IK+
Sbjct: 271 HSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN 330
Query: 355 AVSGTEDRLIVISG 368
A G+ +R I I+G
Sbjct: 331 ATEGSSERQITITG 344
>gi|148699887|gb|EDL31834.1| poly(rC) binding protein 3, isoform CRA_c [Mus musculus]
Length = 373
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 104/361 (28%), Positives = 161/361 (44%), Gaps = 61/361 (16%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R++ I+GP
Sbjct: 49 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT------ 100
Query: 377 SAPQDAVLRVQTRIARAI-----------PDNREQTVMTRLLVASNQIGCLLGKGGSIIA 425
DA+ + IA P + V RL+V ++Q G L+GKGGS I
Sbjct: 101 ----DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 156
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDA-FP 484
E+R+ +GA +++ G D +P + E V I+G +A+ + + QI + + A P
Sbjct: 157 EIRESTGAQVQVAG-DMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIP 212
Query: 485 SINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGP----PPPGSFHP 540
+P + + F G + + G Y+ P K + PP G +P
Sbjct: 213 YRPKPASTPVI--------FAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNP 264
Query: 541 HDDHSAFMHHIHRPG--MPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRS 598
AF PG +P H + Q LM G G PP + +P
Sbjct: 265 -----AF------PGEKLPLHSSEEA----QNLM--GQSSGLD--ASPPASTHELTIPND 305
Query: 599 LVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMS 658
L+ I G G + +IRQ+S A+I I + G++E I I+GTP AQ LI A + S
Sbjct: 306 LIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARLTS 365
Query: 659 E 659
E
Sbjct: 366 E 366
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 112/254 (44%), Gaps = 44/254 (17%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI 212
T + KA ++ + E + +++ T LRL+V ++Q G L+GKGG IK+I
Sbjct: 100 TDAIFKAFAMIAYKFEE-DIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 158
Query: 213 ------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGN 260
D LP +++ V I+G D + + +K I +L++ P+ +IP
Sbjct: 159 RESTGAQVQVAGDMLPN---STERAVTISGTPDAIIQCVKQICVVMLESPPKG-ATIPYR 214
Query: 261 PTGPSHPL---PDHSVSSQGAPYATGHRDVADIH------LPMPP---SIPKF------- 301
P S P+ + + QG YA H D+ +H P PP + P F
Sbjct: 215 PKPASTPVIFAGGQAYTIQGQ-YAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPL 273
Query: 302 HES-------GVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVME 354
H S G SP T L ++ +G +IG+ G I ++Q +G IK+
Sbjct: 274 HSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN 333
Query: 355 AVSGTEDRLIVISG 368
A G+ +R I I+G
Sbjct: 334 ATEGSSERQITITG 347
>gi|384947752|gb|AFI37481.1| poly(rC)-binding protein 3 isoform 1 [Macaca mulatta]
Length = 370
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 104/361 (28%), Positives = 161/361 (44%), Gaps = 61/361 (16%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R++ I+GP
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT------ 97
Query: 377 SAPQDAVLRVQTRIARAI-----------PDNREQTVMTRLLVASNQIGCLLGKGGSIIA 425
DA+ + IA P + V RL+V ++Q G L+GKGGS I
Sbjct: 98 ----DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 153
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDA-FP 484
E+R+ +GA +++ G D +P + E V I+G +A+ + + QI + + A P
Sbjct: 154 EIRESTGAQVQVAG-DMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIP 209
Query: 485 SINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGP----PPPGSFHP 540
+P + + F G + + G Y+ P K + PP G +P
Sbjct: 210 YRPKPASTPVI--------FAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNP 261
Query: 541 HDDHSAFMHHIHRPG--MPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRS 598
AF PG +P H + Q LM G G PP + +P
Sbjct: 262 -----AF------PGEKLPLHSSEEA----QNLM--GQSSGLD--ASPPASTHELTIPND 302
Query: 599 LVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMS 658
L+ I G G + +IRQ+S A+I I + G++E I I+GTP AQ LI A + S
Sbjct: 303 LIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARLTS 362
Query: 659 E 659
E
Sbjct: 363 E 363
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 112/254 (44%), Gaps = 44/254 (17%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI 212
T + KA ++ + E + +++ T LRL+V ++Q G L+GKGG IK+I
Sbjct: 97 TDAIFKAFAMIAYKFEE-DIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 155
Query: 213 ------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGN 260
D LP +++ V I+G D + + +K I +L++ P+ +IP
Sbjct: 156 RESTGAQVQVAGDMLPN---STERAVTISGTPDAIIQCVKQICVVMLESPPKG-ATIPYR 211
Query: 261 PTGPSHPL---PDHSVSSQGAPYATGHRDVADIH------LPMPP---SIPKF------- 301
P S P+ + + QG YA H D+ +H P PP + P F
Sbjct: 212 PKPASTPVIFAGGQAYTIQGQ-YAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPL 270
Query: 302 HES-------GVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVME 354
H S G SP T L ++ +G +IG+ G I ++Q +G IK+
Sbjct: 271 HSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN 330
Query: 355 AVSGTEDRLIVISG 368
A G+ +R I I+G
Sbjct: 331 ATEGSSERQITITG 344
>gi|354476790|ref|XP_003500606.1| PREDICTED: poly(rC)-binding protein 3 [Cricetulus griseus]
gi|149043674|gb|EDL97125.1| rCG61051, isoform CRA_a [Rattus norvegicus]
gi|149043675|gb|EDL97126.1| rCG61051, isoform CRA_a [Rattus norvegicus]
gi|149043676|gb|EDL97127.1| rCG61051, isoform CRA_a [Rattus norvegicus]
gi|149043677|gb|EDL97128.1| rCG61051, isoform CRA_a [Rattus norvegicus]
gi|344241934|gb|EGV98037.1| Poly(rC)-binding protein 3 [Cricetulus griseus]
Length = 371
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 105/362 (29%), Positives = 162/362 (44%), Gaps = 62/362 (17%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R++ I+GP
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT------ 97
Query: 377 SAPQDAVLRVQTRIARAI-----------PDNREQTVMTRLLVASNQIGCLLGKGGSIIA 425
DA+ + IA P + V RL+V ++Q G L+GKGGS I
Sbjct: 98 ----DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 153
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDA-FP 484
E+R+ +GA +++ G D +P + E V I+G +A+ + + QI + + A P
Sbjct: 154 EIRESTGAQVQVAG-DMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIP 209
Query: 485 SINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGP----SFHKFDAVGGP-PPPGSFH 539
+P + + F G + + G Y+ P H+ P PP G +
Sbjct: 210 YRPKPASTPVI--------FAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTN 261
Query: 540 PHDDHSAFMHHIHRPG--MPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPR 597
P AF PG +P H + Q LM G G PP + +P
Sbjct: 262 P-----AF------PGEKLPLHSSEEA----QNLM--GQSSGLD--ASPPASTHELTIPN 302
Query: 598 SLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVM 657
L+ I G G + +IRQ+S A+I I + G++E I I+GTP AQ LI A +
Sbjct: 303 DLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARLT 362
Query: 658 SE 659
SE
Sbjct: 363 SE 364
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 111/255 (43%), Gaps = 45/255 (17%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI 212
T + KA ++ + E + +++ T LRL+V ++Q G L+GKGG IK+I
Sbjct: 97 TDAIFKAFAMIAYKFEE-DIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 155
Query: 213 ------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGN 260
D LP +++ V I+G D + + +K I +L++ P+ +IP
Sbjct: 156 RESTGAQVQVAGDMLPN---STERAVTISGTPDAIIQCVKQICVVMLESPPKG-ATIPYR 211
Query: 261 PTGPSHPL---PDHSVSSQGAPYATGHRD-------VADIHLPMPP---SIPKF------ 301
P S P+ + + QG YA H D +A P PP + P F
Sbjct: 212 PKPASTPVIFAGGQAYTIQGQ-YAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLP 270
Query: 302 -HES-------GVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVM 353
H S G SP T L ++ +G +IG+ G I ++Q +G IK+
Sbjct: 271 LHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIA 330
Query: 354 EAVSGTEDRLIVISG 368
A G+ +R I I+G
Sbjct: 331 NATEGSSERQITITG 345
>gi|334187557|ref|NP_196518.3| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|332004027|gb|AED91410.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 612
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 160/661 (24%), Positives = 258/661 (39%), Gaps = 136/661 (20%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEET-VSGSDERLVVIEASDNKKET 104
+ FR+LC VS+ VIGK G M+ ++ + T +I VE+T + S R++ I
Sbjct: 30 VTFRILCNVSQAGHVIGKHGGMVKKLHKSTESSIWVEKTPLDDSPYRIIKIFGH------ 83
Query: 105 SENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVF 164
S+ R + + + N+++ E E S+ Q AL+ VF
Sbjct: 84 ----VGSVSRVK-----LGVIVNNVSNREKKEQE----------QEVEVSRAQYALIRVF 124
Query: 165 ERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI------------ 212
E + + + SS LL+ + V ++GK G ++++I
Sbjct: 125 EAL----------NFGDCTSSTVSCNLLMEGSHVVTVIGKNGELMQRILEETGCNVQLRS 174
Query: 213 DKLPTCALASDEVVQITG-EVDTVRKALKLISHQLLDNSPRDHESIPGN--PTGPSHPLP 269
L C D V++I G + V KAL IS +L P S+ P P+
Sbjct: 175 HDLSICTNPGDVVLKIEGNRLSAVMKALVSISSRLQACPPISTASLHAEAVPDALRRPME 234
Query: 270 DHSVSSQGA-PYATGHRDVADI-------------------HLPMPPSIPKFHESGV--- 306
S + P+ + HR V +LP P + S
Sbjct: 235 YRSQQYREVDPHGSLHRHVEISQEDALVRPFFRTITQPRIDYLPHPSYDHRLITSASKNP 294
Query: 307 -------LDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGT 359
L K + ++LC +E VI RS+ T I V +
Sbjct: 295 PVTIKQPLQASKDDIRQVDLKILCSNESASVVIKT-----RSV---TDASISVGDRHPDC 346
Query: 360 EDRLIVISGPAHPDDRISAPQDAVLRVQTRI-----ARAIPDNREQTVMTRLLVASNQIG 414
++RL+ I+ D S Q A++ V + + A+ + ++ RL+V SNQI
Sbjct: 347 DERLVTITAFEKTKDITSESQRALVLVFSNMYENATAKVLDSGLTSSITARLVVRSNQIN 406
Query: 415 CLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRL 474
CLLG+ G I +++ +GA+I +L +Q PKC SEN +VV I+GEF V+EA+ Q+T+ L
Sbjct: 407 CLLGEEGRIKTTIQQRTGAFITVLNVEQNPKCVSENNQVVQISGEFPNVREAINQVTSML 466
Query: 475 RHHFFRDAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPP 534
R +F R PFP SP Y+ P+F + + P
Sbjct: 467 REDLINQSF---QRGSQYAVNYSEDPFPEL-----FSPTAGYT---PTFGRSSTMD---P 512
Query: 535 PGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVV 594
FH S+ + P P + D G GL + R+ V
Sbjct: 513 NDIFHYSSQASSRLWESPPPAAPRSVND----GSGGLFSTRDDLVLT--------RIRCV 560
Query: 595 VPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQA 654
+ V I +G ++ + + + G + I ISGTP++ AA+ + A
Sbjct: 561 L---YVWIWKGW-------------SQSSTEESERGNMDMTICISGTPDEIQAAEHRLHA 604
Query: 655 F 655
Sbjct: 605 I 605
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 84/186 (45%), Gaps = 28/186 (15%)
Query: 315 EILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA-VSGTEDRLIVISGPAHPD 373
E +TFR+LC+ + G VIGK G +++ L + T I V + + + R+I I G
Sbjct: 28 EYVTFRILCNVSQAGHVIGKHGGMVKKLHKSTESSIWVEKTPLDDSPYRIIKIFGHVGSV 87
Query: 374 DRI-----------------------SAPQDAVLRVQTRIARAIPDNREQTVMTRLLVAS 410
R+ S Q A++RV A D TV LL+
Sbjct: 88 SRVKLGVIVNNVSNREKKEQEQEVEVSRAQYALIRVFE--ALNFGDCTSSTVSCNLLMEG 145
Query: 411 NQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLING-EFEAVQEALFQ 469
+ + ++GK G ++ + + +G +++ D + C + + V+ I G AV +AL
Sbjct: 146 SHVVTVIGKNGELMQRILEETGCNVQLRSHD-LSICTNPGDVVLKIEGNRLSAVMKALVS 204
Query: 470 ITTRLR 475
I++RL+
Sbjct: 205 ISSRLQ 210
>gi|9957165|gb|AAG09240.1|AF176329_1 alphaCP-3 [Homo sapiens]
Length = 339
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 105/362 (29%), Positives = 162/362 (44%), Gaps = 62/362 (17%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R++ I+GP
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT------ 65
Query: 377 SAPQDAVLRVQTRIARAI-----------PDNREQTVMTRLLVASNQIGCLLGKGGSIIA 425
DA+ + IA P + V RL+V ++Q G L+GKGGS I
Sbjct: 66 ----DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 121
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDA-FP 484
E+R+ +GA +++ G D +P + E V I+G +A+ + + QI + + A P
Sbjct: 122 EIRESTGAQVQVAG-DMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIP 177
Query: 485 SINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGP----SFHKFDAVGGP-PPPGSFH 539
+P + + F G + + G Y+ P H+ P PP G +
Sbjct: 178 YRPKPASTPVI--------FAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTN 229
Query: 540 PHDDHSAFMHHIHRPG--MPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPR 597
P AF PG +P H + Q LM G G PP + +P
Sbjct: 230 P-----AF------PGEKLPLHSSEEA----QNLM--GQSSGLD--ASPPASTHELTIPN 270
Query: 598 SLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVM 657
L+ I G G + +IRQ+S A+I I + G++E I I+GTP AQ LI A +
Sbjct: 271 DLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARLT 330
Query: 658 SE 659
SE
Sbjct: 331 SE 332
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 98/221 (44%), Gaps = 44/221 (19%)
Query: 187 FVLRLLVLSTQVGCLLGKGGCVIKQI------------DKLPTCALASDEVVQITGEVDT 234
LRL+V ++Q G L+GKGG IK+I D LP +++ V I+G D
Sbjct: 98 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN---STERAVTISGTPDA 154
Query: 235 VRKALKLISHQLLDNSPRDHESIPGNPTGPSHPL---PDHSVSSQGAPYATGHRD----- 286
+ + +K I +L++ P+ +IP P S P+ + + QG YA H D
Sbjct: 155 IIQCVKQICVVMLESPPKG-ATIPYRPKPASTPVIFAGGQAYTIQGQ-YAIPHPDQLTKL 212
Query: 287 --VADIHLPMPP---SIPKF-------HES-------GVLDRPKPSPEILTFRLLCHDER 327
+A P PP + P F H S G SP T L ++
Sbjct: 213 HQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDL 272
Query: 328 VGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
+G +IG+ G I ++Q +G IK+ A G+ +R I I+G
Sbjct: 273 IGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITG 313
>gi|148699884|gb|EDL31831.1| poly(rC) binding protein 3, isoform CRA_b [Mus musculus]
gi|148699885|gb|EDL31832.1| poly(rC) binding protein 3, isoform CRA_b [Mus musculus]
gi|148699886|gb|EDL31833.1| poly(rC) binding protein 3, isoform CRA_b [Mus musculus]
gi|148699889|gb|EDL31836.1| poly(rC) binding protein 3, isoform CRA_b [Mus musculus]
gi|148699890|gb|EDL31837.1| poly(rC) binding protein 3, isoform CRA_b [Mus musculus]
gi|149043678|gb|EDL97129.1| rCG61051, isoform CRA_b [Rattus norvegicus]
gi|149043679|gb|EDL97130.1| rCG61051, isoform CRA_b [Rattus norvegicus]
gi|149043680|gb|EDL97131.1| rCG61051, isoform CRA_b [Rattus norvegicus]
Length = 339
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 105/362 (29%), Positives = 162/362 (44%), Gaps = 62/362 (17%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R++ I+GP
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT------ 65
Query: 377 SAPQDAVLRVQTRIARAI-----------PDNREQTVMTRLLVASNQIGCLLGKGGSIIA 425
DA+ + IA P + V RL+V ++Q G L+GKGGS I
Sbjct: 66 ----DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 121
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDA-FP 484
E+R+ +GA +++ G D +P + E V I+G +A+ + + QI + + A P
Sbjct: 122 EIRESTGAQVQVAG-DMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIP 177
Query: 485 SINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGP----SFHKFDAVGGP-PPPGSFH 539
+P + + F G + + G Y+ P H+ P PP G +
Sbjct: 178 YRPKPASTPVI--------FAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTN 229
Query: 540 PHDDHSAFMHHIHRPG--MPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPR 597
P AF PG +P H + Q LM G G PP + +P
Sbjct: 230 P-----AF------PGEKLPLHSSEEA----QNLM--GQSSGLD--ASPPASTHELTIPN 270
Query: 598 SLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVM 657
L+ I G G + +IRQ+S A+I I + G++E I I+GTP AQ LI A +
Sbjct: 271 DLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARLT 330
Query: 658 SE 659
SE
Sbjct: 331 SE 332
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 98/221 (44%), Gaps = 44/221 (19%)
Query: 187 FVLRLLVLSTQVGCLLGKGGCVIKQI------------DKLPTCALASDEVVQITGEVDT 234
LRL+V ++Q G L+GKGG IK+I D LP +++ V I+G D
Sbjct: 98 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN---STERAVTISGTPDA 154
Query: 235 VRKALKLISHQLLDNSPRDHESIPGNPTGPSHPL---PDHSVSSQGAPYATGHRD----- 286
+ + +K I +L++ P+ +IP P S P+ + + QG YA H D
Sbjct: 155 IIQCVKQICVVMLESPPKG-ATIPYRPKPASTPVIFAGGQAYTIQGQ-YAIPHPDQLTKL 212
Query: 287 --VADIHLPMPP---SIPKF-------HES-------GVLDRPKPSPEILTFRLLCHDER 327
+A P PP + P F H S G SP T L ++
Sbjct: 213 HQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDL 272
Query: 328 VGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
+G +IG+ G I ++Q +G IK+ A G+ +R I I+G
Sbjct: 273 IGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITG 313
>gi|257831439|gb|ACV71020.1| UPA21 [Capsicum annuum]
Length = 433
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 95/363 (26%), Positives = 163/363 (44%), Gaps = 52/363 (14%)
Query: 318 TFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRIS 377
+RL+ +VG +IG+ G +++ + ++TG I+V+E G DR+++ISG PD ++S
Sbjct: 55 VYRLVVPLVKVGSIIGRKGELVKKMCEQTGARIRVLEGPLGNADRIVLISGREDPDAQVS 114
Query: 378 APQDAVLRVQTRIAR------AIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLS 431
DAV RV R+A +LL+AS+Q L+G+ GS I E+++ S
Sbjct: 115 PAMDAVFRVFKRVAGLEGGDPGAAAAGFAFCSFKLLMASSQAVHLIGRHGSTIKEIQERS 174
Query: 432 GAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLN 491
GA +R+L +D + A+ +E +V I GE V +A + +LR ++ +
Sbjct: 175 GASLRVLSEDDVVPYATADERIVEIRGEGLKVLDAFEAVVRQLRKFL-------VDHSMI 227
Query: 492 PTF---LDQVSPFPSFIGRREL--SPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSA 546
P F Q P S+ + + S G S++ S ++ + D +A
Sbjct: 228 PIFEKTCSQDRPLESWAEKSQSLNSEAGAVSDYSFSMNR-----------DTYLLDCEAA 276
Query: 547 FMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRS---LVPII 603
+ R + + D G G+ G +G PVV + VP++
Sbjct: 277 MDSKLPRSTLSLYGQDP---GHGGIRTSAGRIG------------PVVTQMTKVMQVPLL 321
Query: 604 QGED-----GACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMS 658
ED G + IR+ S A +T+ + + E I I G+ + A+ LIQ F+ +
Sbjct: 322 YAEDIIGIGGTNIAYIRRTSKAVLTVQESRGLPEEITIEIKGSSSEVQTAEQLIQEFISN 381
Query: 659 ETE 661
E
Sbjct: 382 HKE 384
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 137/368 (37%), Gaps = 75/368 (20%)
Query: 42 FPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNK 101
+PG ++R++ P+ K+ +IG+ GE++ ++ + TG IRV E G+ +R+V+I
Sbjct: 50 WPGDNVYRLVVPLVKVGSIIGRKGELVKKMCEQTGARIRVLEGPLGNADRIVLI------ 103
Query: 102 KETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALL 161
+GRE + + + S A+
Sbjct: 104 ----------------SGRE--------------------------DPDAQVSPAMDAVF 121
Query: 162 LVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI--------- 212
VF+R+ +E A F +LL+ S+Q L+G+ G IK+I
Sbjct: 122 RVFKRVAGLEGGDPGAAAAGFAFCSF--KLLMASSQAVHLIGRHGSTIKEIQERSGASLR 179
Query: 213 ----DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPL 268
D + A A + +V+I GE V A + + Q L DH IP S
Sbjct: 180 VLSEDDVVPYATADERIVEIRGEGLKVLDAFEAVVRQ-LRKFLVDHSMIPIFEKTCSQDR 238
Query: 269 PDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERV 328
P S + + + V+D M +D P T L D
Sbjct: 239 PLESWAEKSQSLNSEAGAVSDYSFSMNRDTYLLDCEAAMDSKLPRS---TLSLYGQDPGH 295
Query: 329 GGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQT 388
GG+ G I + Q T KVM+ + +I I G I AVL VQ
Sbjct: 296 GGIRTSAGRIGPVVTQMT----KVMQVPLLYAEDIIGIGGTNIA--YIRRTSKAVLTVQE 349
Query: 389 RIARAIPD 396
+R +P+
Sbjct: 350 --SRGLPE 355
>gi|403297203|ref|XP_003939468.1| PREDICTED: poly(rC)-binding protein 3 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 371
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 105/362 (29%), Positives = 162/362 (44%), Gaps = 62/362 (17%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R++ I+GP
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT------ 97
Query: 377 SAPQDAVLRVQTRIARAI-----------PDNREQTVMTRLLVASNQIGCLLGKGGSIIA 425
DA+ + IA P + V RL+V ++Q G L+GKGGS I
Sbjct: 98 ----DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 153
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDA-FP 484
E+R+ +GA +++ G D +P + E V I+G +A+ + + QI + + A P
Sbjct: 154 EIRESTGAQVQVAG-DMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIP 209
Query: 485 SINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGP----SFHKFDAVGGP-PPPGSFH 539
+P + + F G + + G Y+ P H+ P PP G +
Sbjct: 210 YRPKPASTPVI--------FAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTN 261
Query: 540 PHDDHSAFMHHIHRPG--MPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPR 597
P AF PG +P H + Q LM G G PP + +P
Sbjct: 262 P-----AF------PGEKLPLHSSEEA----QNLM--GQSSGLD--ASPPASTHELTIPN 302
Query: 598 SLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVM 657
L+ I G G + +IRQ+S A+I I + G++E I I+GTP AQ LI A +
Sbjct: 303 DLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARLT 362
Query: 658 SE 659
SE
Sbjct: 363 SE 364
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 111/255 (43%), Gaps = 45/255 (17%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI 212
T + KA ++ + E + +++ T LRL+V ++Q G L+GKGG IK+I
Sbjct: 97 TDAIFKAFAMIAYKFEE-DIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 155
Query: 213 ------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGN 260
D LP +++ V I+G D + + +K I +L++ P+ +IP
Sbjct: 156 RESTGAQVQVAGDMLPN---STERAVTISGTPDAIIQCVKQICVVMLESPPKG-ATIPYR 211
Query: 261 PTGPSHPL---PDHSVSSQGAPYATGHRD-------VADIHLPMPP---SIPKF------ 301
P S P+ + + QG YA H D +A P PP + P F
Sbjct: 212 PKPASTPVIFAGGQAYTIQGQ-YAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLP 270
Query: 302 -HES-------GVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVM 353
H S G SP T L ++ +G +IG+ G I ++Q +G IK+
Sbjct: 271 LHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIA 330
Query: 354 EAVSGTEDRLIVISG 368
A G+ +R I I+G
Sbjct: 331 NATEGSSERQITITG 345
>gi|380798665|gb|AFE71208.1| poly(rC)-binding protein 3 isoform 1, partial [Macaca mulatta]
Length = 370
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 105/362 (29%), Positives = 162/362 (44%), Gaps = 62/362 (17%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R++ I+GP
Sbjct: 45 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT------ 96
Query: 377 SAPQDAVLRVQTRIARAI-----------PDNREQTVMTRLLVASNQIGCLLGKGGSIIA 425
DA+ + IA P + V RL+V ++Q G L+GKGGS I
Sbjct: 97 ----DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 152
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDA-FP 484
E+R+ +GA +++ G D +P + E V I+G +A+ + + QI + + A P
Sbjct: 153 EIRESTGAQVQVAG-DMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIP 208
Query: 485 SINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGP----SFHKFDAVGGP-PPPGSFH 539
+P + + F G + + G Y+ P H+ P PP G +
Sbjct: 209 YRPKPASTPVI--------FAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTN 260
Query: 540 PHDDHSAFMHHIHRPG--MPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPR 597
P AF PG +P H + Q LM G G PP + +P
Sbjct: 261 P-----AF------PGEKLPLHSSEEA----QNLM--GQSSGLD--ASPPASTHELTIPN 301
Query: 598 SLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVM 657
L+ I G G + +IRQ+S A+I I + G++E I I+GTP AQ LI A +
Sbjct: 302 DLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARLT 361
Query: 658 SE 659
SE
Sbjct: 362 SE 363
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 111/255 (43%), Gaps = 45/255 (17%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI 212
T + KA ++ + E + +++ T LRL+V ++Q G L+GKGG IK+I
Sbjct: 96 TDAIFKAFAMIAYKFEE-DIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 154
Query: 213 ------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGN 260
D LP +++ V I+G D + + +K I +L++ P+ +IP
Sbjct: 155 RESTGAQVQVAGDMLPN---STERAVTISGTPDAIIQCVKQICVVMLESPPKG-ATIPYR 210
Query: 261 PTGPSHPL---PDHSVSSQGAPYATGHRD-------VADIHLPMPP---SIPKF------ 301
P S P+ + + QG YA H D +A P PP + P F
Sbjct: 211 PKPASTPVIFAGGQAYTIQGQ-YAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLP 269
Query: 302 -HES-------GVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVM 353
H S G SP T L ++ +G +IG+ G I ++Q +G IK+
Sbjct: 270 LHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIA 329
Query: 354 EAVSGTEDRLIVISG 368
A G+ +R I I+G
Sbjct: 330 NATEGSSERQITITG 344
>gi|348554794|ref|XP_003463210.1| PREDICTED: poly(rC)-binding protein 3-like [Cavia porcellus]
Length = 384
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 105/362 (29%), Positives = 162/362 (44%), Gaps = 62/362 (17%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R++ I+GP
Sbjct: 59 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT------ 110
Query: 377 SAPQDAVLRVQTRIARAI-----------PDNREQTVMTRLLVASNQIGCLLGKGGSIIA 425
DA+ + IA P + V RL+V ++Q G L+GKGGS I
Sbjct: 111 ----DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 166
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDA-FP 484
E+R+ +GA +++ G D +P + E V I+G +A+ + + QI + + A P
Sbjct: 167 EIRESTGAQVQVAG-DMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIP 222
Query: 485 SINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGP----SFHKFDAVGGP-PPPGSFH 539
+P + + F G + + G Y+ P H+ P PP G +
Sbjct: 223 YRPKPASTPVI--------FAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTN 274
Query: 540 PHDDHSAFMHHIHRPG--MPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPR 597
P AF PG +P H + Q LM G G PP + +P
Sbjct: 275 P-----AF------PGEKLPLHSSEEA----QNLM--GQSSGLD--ASPPASTHELTIPN 315
Query: 598 SLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVM 657
L+ I G G + +IRQ+S A+I I + G++E I I+GTP AQ LI A +
Sbjct: 316 DLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARLT 375
Query: 658 SE 659
SE
Sbjct: 376 SE 377
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 111/255 (43%), Gaps = 45/255 (17%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI 212
T + KA ++ + E + +++ T LRL+V ++Q G L+GKGG IK+I
Sbjct: 110 TDAIFKAFAMIAYKFEE-DIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 168
Query: 213 ------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGN 260
D LP +++ V I+G D + + +K I +L++ P+ +IP
Sbjct: 169 RESTGAQVQVAGDMLPN---STERAVTISGTPDAIIQCVKQICVVMLESPPKG-ATIPYR 224
Query: 261 PTGPSHPL---PDHSVSSQGAPYATGHRD-------VADIHLPMPP---SIPKF------ 301
P S P+ + + QG YA H D +A P PP + P F
Sbjct: 225 PKPASTPVIFAGGQAYTIQGQ-YAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLP 283
Query: 302 -HES-------GVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVM 353
H S G SP T L ++ +G +IG+ G I ++Q +G IK+
Sbjct: 284 LHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIA 343
Query: 354 EAVSGTEDRLIVISG 368
A G+ +R I I+G
Sbjct: 344 NATEGSSERQITITG 358
>gi|440894425|gb|ELR46887.1| Poly(rC)-binding protein 3 [Bos grunniens mutus]
Length = 374
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 105/362 (29%), Positives = 162/362 (44%), Gaps = 62/362 (17%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R++ I+GP
Sbjct: 49 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT------ 100
Query: 377 SAPQDAVLRVQTRIARAI-----------PDNREQTVMTRLLVASNQIGCLLGKGGSIIA 425
DA+ + IA P + V RL+V ++Q G L+GKGGS I
Sbjct: 101 ----DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 156
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDA-FP 484
E+R+ +GA +++ G D +P + E V I+G +A+ + + QI + + A P
Sbjct: 157 EIRESTGAQVQVAG-DMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIP 212
Query: 485 SINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGP----SFHKFDAVGGP-PPPGSFH 539
+P + + F G + + G Y+ P H+ P PP G +
Sbjct: 213 YRPKPASTPVI--------FAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTN 264
Query: 540 PHDDHSAFMHHIHRPG--MPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPR 597
P AF PG +P H + Q LM G G PP + +P
Sbjct: 265 P-----AF------PGEKLPLHSSEEA----QNLM--GQSSGLD--ASPPASTHELTIPN 305
Query: 598 SLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVM 657
L+ I G G + +IRQ+S A+I I + G++E I I+GTP AQ LI A +
Sbjct: 306 DLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARLT 365
Query: 658 SE 659
SE
Sbjct: 366 SE 367
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 111/255 (43%), Gaps = 45/255 (17%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI 212
T + KA ++ + E + +++ T LRL+V ++Q G L+GKGG IK+I
Sbjct: 100 TDAIFKAFAMIAYKFEE-DIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 158
Query: 213 ------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGN 260
D LP +++ V I+G D + + +K I +L++ P+ +IP
Sbjct: 159 RESTGAQVQVAGDMLPN---STERAVTISGTPDAIIQCVKQICVVMLESPPKG-ATIPYR 214
Query: 261 PTGPSHPL---PDHSVSSQGAPYATGHRD-------VADIHLPMPP---SIPKF------ 301
P S P+ + + QG YA H D +A P PP + P F
Sbjct: 215 PKPASTPVIFAGGQAYTIQGQ-YAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLP 273
Query: 302 -HES-------GVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVM 353
H S G SP T L ++ +G +IG+ G I ++Q +G IK+
Sbjct: 274 LHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIA 333
Query: 354 EAVSGTEDRLIVISG 368
A G+ +R I I+G
Sbjct: 334 NATEGSSERQITITG 348
>gi|413933627|gb|AFW68178.1| nucleic acid binding protein [Zea mays]
Length = 637
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 101/359 (28%), Positives = 152/359 (42%), Gaps = 40/359 (11%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISA 378
FR+L ++VG +IG+ G I+ + +ET IK+++ G +R ++IS PD +S
Sbjct: 233 FRILVPAQKVGAIIGRKGEFIKKMCEETKARIKILDGPPGVPERAVMISAKDEPDAPLSP 292
Query: 379 PQDAVLRVQTRIARAIPDNREQTVM-------TRLLVASNQIGCLLGKGGSIIAEMRKLS 431
D +LRV RI + Q TRLLV S+Q G L+GK G+ I ++ S
Sbjct: 293 AMDGLLRVHKRITDSSDGESSQPQRSAGNIGPTRLLVPSSQAGSLIGKQGATIKSIQDSS 352
Query: 432 GAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFF-RDAFPSINRPL 490
+ +RI+ + +P A ++ VV I GE VQEA+ I++ LR R P +
Sbjct: 353 KSIVRIV--ENVPPVALNDDRVVEIQGEPLGVQEAVELISSHLRKFLVDRSVLPLFEAHM 410
Query: 491 NPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGG------PPPPGSFHPHDDH 544
+ + P P + PP + GG P P S++P D
Sbjct: 411 KMHGMPREQPVPP---PQHWGPPQTWIRPPNIPPGGPGFGGNPQFMHPRPQDSYYPSPDV 467
Query: 545 SAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVG---PPHRRVPVV----VPR 597
PHM +G P G G P H V +P
Sbjct: 468 -------------PHMEKQPHYGISAYGREAPPSGA-SATGNQPPSHAGSQVAHDMHIPL 513
Query: 598 SLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFV 656
+ + G GA + IR+ S A +TI + + E + I+GT Q AQ LIQ F+
Sbjct: 514 AYADAVIGAAGASISYIRRHSGATVTIQESRGAPGEMTVEITGTAAQVQTAQQLIQNFM 572
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 95/221 (42%), Gaps = 70/221 (31%)
Query: 42 FPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNK 101
+PG +FR+L P K+ +IG+ GE + ++ ++T I++ + G ER V+I A D
Sbjct: 227 WPGESVFRILVPAQKVGAIIGRKGEFIKKMCEETKARIKILDGPPGVPERAVMISAKDEP 286
Query: 102 KETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALL 161
+A + S MDG LL
Sbjct: 287 -------DAPL----------------------------SPAMDG-------------LL 298
Query: 162 LVFERMVEVEPETEVADQENTKSSKFV-----LRLLVLSTQVGCLLGKGGCVIKQI---- 212
V +R+ T+ +D E+++ + RLLV S+Q G L+GK G IK I
Sbjct: 299 RVHKRI------TDSSDGESSQPQRSAGNIGPTRLLVPSSQAGSLIGKQGATIKSIQDSS 352
Query: 213 -------DKLPTCALASDEVVQITGEVDTVRKALKLISHQL 246
+ +P AL D VV+I GE V++A++LIS L
Sbjct: 353 KSIVRIVENVPPVALNDDRVVEIQGEPLGVQEAVELISSHL 393
>gi|332872312|ref|XP_001157899.2| PREDICTED: poly(rC)-binding protein 3 isoform 8 [Pan troglodytes]
gi|397506692|ref|XP_003823855.1| PREDICTED: poly(rC)-binding protein 3 isoform 1 [Pan paniscus]
gi|426393341|ref|XP_004062983.1| PREDICTED: poly(rC)-binding protein 3 [Gorilla gorilla gorilla]
Length = 371
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 105/362 (29%), Positives = 162/362 (44%), Gaps = 62/362 (17%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R++ I+GP
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT------ 97
Query: 377 SAPQDAVLRVQTRIARAI-----------PDNREQTVMTRLLVASNQIGCLLGKGGSIIA 425
DA+ + IA P + V RL+V ++Q G L+GKGGS I
Sbjct: 98 ----DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 153
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDA-FP 484
E+R+ +GA +++ G D +P + E V I+G +A+ + + QI + + A P
Sbjct: 154 EIRESTGAQVQVAG-DMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIP 209
Query: 485 SINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGP----SFHKFDAVGGP-PPPGSFH 539
+P + + F G + + G Y+ P H+ P PP G +
Sbjct: 210 YRPKPASTPVI--------FAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTN 261
Query: 540 PHDDHSAFMHHIHRPG--MPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPR 597
P AF PG +P H + Q LM G G PP + +P
Sbjct: 262 P-----AF------PGEKLPLHSSEEA----QNLM--GQSSGLD--ASPPASTHELTIPN 302
Query: 598 SLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVM 657
L+ I G G + +IRQ+S A+I I + G++E I I+GTP AQ LI A +
Sbjct: 303 DLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARLT 362
Query: 658 SE 659
SE
Sbjct: 363 SE 364
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 111/255 (43%), Gaps = 45/255 (17%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI 212
T + KA ++ + E + +++ T LRL+V ++Q G L+GKGG IK+I
Sbjct: 97 TDAIFKAFAMIAYKFEE-DIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 155
Query: 213 ------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGN 260
D LP +++ V I+G D + + +K I +L++ P+ +IP
Sbjct: 156 RESTGAQVQVAGDMLPN---STERAVTISGTPDAIIQCVKQICVVMLESPPKG-ATIPYR 211
Query: 261 PTGPSHPL---PDHSVSSQGAPYATGHRD-------VADIHLPMPP---SIPKF------ 301
P S P+ + + QG YA H D +A P PP + P F
Sbjct: 212 PKPASTPVIFAGGQAYTIQGQ-YAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLP 270
Query: 302 -HES-------GVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVM 353
H S G SP T L ++ +G +IG+ G I ++Q +G IK+
Sbjct: 271 LHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIA 330
Query: 354 EAVSGTEDRLIVISG 368
A G+ +R I I+G
Sbjct: 331 NATEGSSERQITITG 345
>gi|171906586|ref|NP_067543.2| poly(rC)-binding protein 3 [Mus musculus]
gi|296439279|sp|P57722.3|PCBP3_MOUSE RecName: Full=Poly(rC)-binding protein 3; AltName: Full=Alpha-CP3
gi|26348076|dbj|BAC37686.1| unnamed protein product [Mus musculus]
gi|148699881|gb|EDL31828.1| poly(rC) binding protein 3, isoform CRA_a [Mus musculus]
gi|148699882|gb|EDL31829.1| poly(rC) binding protein 3, isoform CRA_a [Mus musculus]
gi|148699883|gb|EDL31830.1| poly(rC) binding protein 3, isoform CRA_a [Mus musculus]
gi|148699888|gb|EDL31835.1| poly(rC) binding protein 3, isoform CRA_a [Mus musculus]
Length = 371
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 105/362 (29%), Positives = 162/362 (44%), Gaps = 62/362 (17%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R++ I+GP
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT------ 97
Query: 377 SAPQDAVLRVQTRIARAI-----------PDNREQTVMTRLLVASNQIGCLLGKGGSIIA 425
DA+ + IA P + V RL+V ++Q G L+GKGGS I
Sbjct: 98 ----DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 153
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDA-FP 484
E+R+ +GA +++ G D +P + E V I+G +A+ + + QI + + A P
Sbjct: 154 EIRESTGAQVQVAG-DMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIP 209
Query: 485 SINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGP----SFHKFDAVGGP-PPPGSFH 539
+P + + F G + + G Y+ P H+ P PP G +
Sbjct: 210 YRPKPASTPVI--------FAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTN 261
Query: 540 PHDDHSAFMHHIHRPG--MPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPR 597
P AF PG +P H + Q LM G G PP + +P
Sbjct: 262 P-----AF------PGEKLPLHSSEEA----QNLM--GQSSGLD--ASPPASTHELTIPN 302
Query: 598 SLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVM 657
L+ I G G + +IRQ+S A+I I + G++E I I+GTP AQ LI A +
Sbjct: 303 DLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARLT 362
Query: 658 SE 659
SE
Sbjct: 363 SE 364
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 111/255 (43%), Gaps = 45/255 (17%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI 212
T + KA ++ + E + +++ T LRL+V ++Q G L+GKGG IK+I
Sbjct: 97 TDAIFKAFAMIAYKFEE-DIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 155
Query: 213 ------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGN 260
D LP +++ V I+G D + + +K I +L++ P+ +IP
Sbjct: 156 RESTGAQVQVAGDMLPN---STERAVTISGTPDAIIQCVKQICVVMLESPPKG-ATIPYR 211
Query: 261 PTGPSHPL---PDHSVSSQGAPYATGHRD-------VADIHLPMPP---SIPKF------ 301
P S P+ + + QG YA H D +A P PP + P F
Sbjct: 212 PKPASTPVIFAGGQAYTIQGQ-YAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLP 270
Query: 302 -HES-------GVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVM 353
H S G SP T L ++ +G +IG+ G I ++Q +G IK+
Sbjct: 271 LHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIA 330
Query: 354 EAVSGTEDRLIVISG 368
A G+ +R I I+G
Sbjct: 331 NATEGSSERQITITG 345
>gi|194306631|ref|NP_065389.2| poly(rC)-binding protein 3 isoform 1 [Homo sapiens]
gi|296439262|sp|P57721.2|PCBP3_HUMAN RecName: Full=Poly(rC)-binding protein 3; AltName: Full=Alpha-CP3
gi|119629729|gb|EAX09324.1| poly(rC) binding protein 3, isoform CRA_b [Homo sapiens]
Length = 371
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 105/362 (29%), Positives = 162/362 (44%), Gaps = 62/362 (17%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R++ I+GP
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT------ 97
Query: 377 SAPQDAVLRVQTRIARAI-----------PDNREQTVMTRLLVASNQIGCLLGKGGSIIA 425
DA+ + IA P + V RL+V ++Q G L+GKGGS I
Sbjct: 98 ----DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 153
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDA-FP 484
E+R+ +GA +++ G D +P + E V I+G +A+ + + QI + + A P
Sbjct: 154 EIRESTGAQVQVAG-DMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIP 209
Query: 485 SINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGP----SFHKFDAVGGP-PPPGSFH 539
+P + + F G + + G Y+ P H+ P PP G +
Sbjct: 210 YRPKPASTPVI--------FAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTN 261
Query: 540 PHDDHSAFMHHIHRPG--MPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPR 597
P AF PG +P H + Q LM G G PP + +P
Sbjct: 262 P-----AF------PGEKLPLHSSEEA----QNLM--GQSSGLD--ASPPASTHELTIPN 302
Query: 598 SLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVM 657
L+ I G G + +IRQ+S A+I I + G++E I I+GTP AQ LI A +
Sbjct: 303 DLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARLT 362
Query: 658 SE 659
SE
Sbjct: 363 SE 364
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 111/255 (43%), Gaps = 45/255 (17%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI 212
T + KA ++ + E + +++ T LRL+V ++Q G L+GKGG IK+I
Sbjct: 97 TDAIFKAFAMIAYKFEE-DIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 155
Query: 213 ------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGN 260
D LP +++ V I+G D + + +K I +L++ P+ +IP
Sbjct: 156 RESTGAQVQVAGDMLPN---STERAVTISGTPDAIIQCVKQICVVMLESPPKG-ATIPYR 211
Query: 261 PTGPSHPL---PDHSVSSQGAPYATGHRD-------VADIHLPMPP---SIPKF------ 301
P S P+ + + QG YA H D +A P PP + P F
Sbjct: 212 PKPASTPVIFAGGQAYTIQGQ-YAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLP 270
Query: 302 -HES-------GVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVM 353
H S G SP T L ++ +G +IG+ G I ++Q +G IK+
Sbjct: 271 LHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIA 330
Query: 354 EAVSGTEDRLIVISG 368
A G+ +R I I+G
Sbjct: 331 NATEGSSERQITITG 345
>gi|426218397|ref|XP_004003433.1| PREDICTED: poly(rC)-binding protein 3 isoform 2 [Ovis aries]
Length = 319
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 98/359 (27%), Positives = 154/359 (42%), Gaps = 76/359 (21%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R++ I+GP
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT------ 65
Query: 377 SAPQDAVLRVQTRIARAI-----------PDNREQTVMTRLLVASNQIGCLLGKGGSIIA 425
DA+ + IA P + V RL+V ++Q G L+GKGGS I
Sbjct: 66 ----DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 121
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPS 485
E+R+ +GA +++ G D +P + E V I+G +A+ + + QI + R
Sbjct: 122 EIRESTGAQVQVAG-DMLP---NSTERAVTISGTPDAIIQCVKQICVVMLES-PRKGVTV 176
Query: 486 INRPLNPTFLDQVSPFPS-----FIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHP 540
+ V+P P+ F G + + G Y+ P
Sbjct: 177 V-----------VAPKPASTPVIFAGGQAYTIQGQYA---------------------IP 204
Query: 541 HDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLV 600
H D + +H+ M P+ P G P G PP + +P L+
Sbjct: 205 HPD----LTKLHQLAM-----QQTPFPPLGQTNPAFPAGLD--ASPPASTHELTIPNDLI 253
Query: 601 PIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
I G G + +IRQ+S A+I I + G++E I I+GTP AQ LI A + SE
Sbjct: 254 GCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARLTSE 312
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 100/208 (48%), Gaps = 35/208 (16%)
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQI------------DKLPTCALASDEVVQITGEVDTVR 236
LRL+V ++Q G L+GKGG IK+I D LP +++ V I+G D +
Sbjct: 100 LRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN---STERAVTISGTPDAII 156
Query: 237 KALKLISHQLLDNSPRDHESIPGNPTGPSHPL---PDHSVSSQGAPYATGHRDVADIH-- 291
+ +K I +L+ SPR ++ P S P+ + + QG YA H D+ +H
Sbjct: 157 QCVKQICVVMLE-SPRKGVTVVVAPKPASTPVIFAGGQAYTIQGQ-YAIPHPDLTKLHQL 214
Query: 292 ----LPMPP---SIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQ 344
P PP + P F LD SP T L ++ +G +IG+ G I ++Q
Sbjct: 215 AMQQTPFPPLGQTNPAFPAG--LDA---SPPASTHELTIPNDLIGCIIGRQGTKINEIRQ 269
Query: 345 ETGCDIKVMEAVSGTEDRLIVISG-PAH 371
+G IK+ A G+ +R I I+G PA+
Sbjct: 270 MSGAQIKIANATEGSSERQITITGTPAN 297
>gi|356556240|ref|XP_003546434.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 442
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 159/361 (44%), Gaps = 42/361 (11%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISA 378
FRL+ +VG +IG+ G +I+ + +ET I+V++A GT DR++++SG P+ +S
Sbjct: 54 FRLIVPVGKVGSIIGRKGELIKKMCEETRSRIRVLDAPLGTPDRIVLVSGKEEPEAALSP 113
Query: 379 PQDAVLRVQTRI---ARAIPDNREQTV-----MTRLLVASNQIGCLLGKGGSIIAEMRKL 430
DAV+R+ R+ + +N+E RLLVAS Q L+GK GS+I +++
Sbjct: 114 AMDAVVRIFKRVSGLSETDAENKESAAGLAFCSIRLLVASTQAINLIGKQGSLIKSIQEN 173
Query: 431 SGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFF-RDAFPSINRP 489
+ A +R+L D++ A+ +E +V I GE V +AL + LR P +
Sbjct: 174 TSASVRVLSGDEVQSYATVDERIVEIQGEALKVLKALEAVVGHLRKFLVDHSVLPLFEKT 233
Query: 490 LNPTFLDQVSPFPSFIGRRELSPPGMYSNFG--PSFHKFDAVGGPPPP--GSFHPHDDHS 545
N + Q ++ + L S F P K D+V SF P S
Sbjct: 234 YNAS-TSQDRQAETWSDKSLLHTTSRTSIFADIPYSTKRDSVLADRESQLDSFLPSSTMS 292
Query: 546 AFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQG 605
+ G+ L VG P+ V V+ +P+
Sbjct: 293 LYGQDSSLSGVRSS----------ALGRVGAPI------------VTTVIQTMQIPLSYA 330
Query: 606 ED-----GACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSET 660
ED G ++ IR+ S A +T+ + + E V+ I GT + AQ LIQ + S
Sbjct: 331 EDIIGIQGTNIEYIRRTSGAILTVQESRV-PDEIVVEIKGTSSEVQTAQQLIQDVISSHK 389
Query: 661 E 661
E
Sbjct: 390 E 390
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 103/232 (44%), Gaps = 66/232 (28%)
Query: 42 FPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNK 101
+PG +FR++ PV K+ +IG+ GE++ ++ ++T IRV + G+ +R+V++
Sbjct: 48 WPGDCVFRLIVPVGKVGSIIGRKGELIKKMCEETRSRIRVLDAPLGTPDRIVLV------ 101
Query: 102 KETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALL 161
+G+EE E S A++
Sbjct: 102 ----------------SGKEEP--------------------------EAALSPAMDAVV 119
Query: 162 LVFERMVEVEPETEVADQENTKSSKFV-LRLLVLSTQVGCLLGKGGCVIKQI-------- 212
+F+R+ + ET+ ++E+ F +RLLV STQ L+GK G +IK I
Sbjct: 120 RIFKRVSGLS-ETDAENKESAAGLAFCSIRLLVASTQAINLIGKQGSLIKSIQENTSASV 178
Query: 213 -----DKLPTCALASDEVVQITGEVDTVRKALK-LISHQLLDNSPRDHESIP 258
D++ + A + +V+I GE V KAL+ ++ H L DH +P
Sbjct: 179 RVLSGDEVQSYATVDERIVEIQGEALKVLKALEAVVGH--LRKFLVDHSVLP 228
>gi|426218401|ref|XP_004003435.1| PREDICTED: poly(rC)-binding protein 3 isoform 4 [Ovis aries]
Length = 332
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 101/364 (27%), Positives = 158/364 (43%), Gaps = 73/364 (20%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R++ I+GP
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT------ 65
Query: 377 SAPQDAVLRVQTRIARAI-----------PDNREQTVMTRLLVASNQIGCLLGKGGSIIA 425
DA+ + IA P + V RL+V ++Q G L+GKGGS I
Sbjct: 66 ----DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 121
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPS 485
E+R+ +GA +++ G D +P + E V I+G +A+ + + QI + R
Sbjct: 122 EIRESTGAQVQVAG-DMLP---NSTERAVTISGTPDAIIQCVKQICVVMLES-PRKGVTV 176
Query: 486 INRPLNPTFLDQVSPFPS-----FIGRRELSPPGMYSNFGPSFHKFDAVGGP----PPPG 536
+ V+P P+ F G + + G Y+ P K + PP G
Sbjct: 177 V-----------VAPKPASTPVIFAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLG 225
Query: 537 SFHPHDDHSAFMHHIHRPGMPPHMPDMK-PWGPQGLMEVGGPMGFPDFVGPPHRRVPVVV 595
+P AF PG +P ++ PW PP + +
Sbjct: 226 QTNP-----AF------PGTDRAVPFVRSPWACLD-------------ASPPASTHELTI 261
Query: 596 PRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAF 655
P L+ I G G + +IRQ+S A+I I + G++E I I+GTP AQ LI A
Sbjct: 262 PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINAR 321
Query: 656 VMSE 659
+ SE
Sbjct: 322 LTSE 325
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 102/219 (46%), Gaps = 44/219 (20%)
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQI------------DKLPTCALASDEVVQITGEVDTVR 236
LRL+V ++Q G L+GKGG IK+I D LP +++ V I+G D +
Sbjct: 100 LRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN---STERAVTISGTPDAII 156
Query: 237 KALKLISHQLLDNSPRDHESIPGNPTGPSHPL---PDHSVSSQGAPYATGHRDVADIH-- 291
+ +K I +L+ SPR ++ P S P+ + + QG YA H D+ +H
Sbjct: 157 QCVKQICVVMLE-SPRKGVTVVVAPKPASTPVIFAGGQAYTIQGQ-YAIPHPDLTKLHQL 214
Query: 292 ----LPMPP---SIPKFHESGVLDRPKP-----------SPEILTFRLLCHDERVGGVIG 333
P PP + P F + DR P SP T L ++ +G +IG
Sbjct: 215 AMQQTPFPPLGQTNPAFPGT---DRAVPFVRSPWACLDASPPASTHELTIPNDLIGCIIG 271
Query: 334 KGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG-PAH 371
+ G I ++Q +G IK+ A G+ +R I I+G PA+
Sbjct: 272 RQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPAN 310
>gi|15236094|ref|NP_194330.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|4538929|emb|CAB39665.1| putative nucleic acid binding protein [Arabidopsis thaliana]
gi|7269451|emb|CAB79455.1| putative nucleic acid binding protein [Arabidopsis thaliana]
gi|15810499|gb|AAL07137.1| putative nucleic acid binding protein [Arabidopsis thaliana]
gi|20466386|gb|AAM20510.1| putative nucleic acid binding protein [Arabidopsis thaliana]
gi|21280915|gb|AAM45112.1| putative nucleic acid binding protein [Arabidopsis thaliana]
gi|332659742|gb|AEE85142.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 495
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 96/168 (57%), Gaps = 9/168 (5%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISA 378
FR++ +VG +IG+ G I+ + +ET IKV++ T DR+++ISG P+ +S
Sbjct: 76 FRMIVPVTKVGAIIGRKGDFIKKMCEETRARIKVLDGPVNTPDRIVLISGKEEPEAYMSP 135
Query: 379 PQDAVLRVQTRIARAIPDNREQTVM--------TRLLVASNQIGCLLGKGGSIIAEMRKL 430
DAVLRV R++ +PDN + V RLLVAS Q L+GK GS+I + +
Sbjct: 136 AMDAVLRVFRRVS-GLPDNDDDDVQNAGSVFSSVRLLVASTQAINLIGKQGSLIKSIVEN 194
Query: 431 SGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHF 478
SGA +RIL +++ P A+++E +V + GE + +AL I LR
Sbjct: 195 SGASVRILSEEETPFYAAQDERIVDLQGEALKILKALEAIVGHLRRFL 242
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 92/218 (42%), Gaps = 62/218 (28%)
Query: 42 FPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNK 101
+PG +FR++ PV+K+ +IG+ G+ + ++ ++T I+V + + +R+V+I
Sbjct: 70 WPGDCVFRMIVPVTKVGAIIGRKGDFIKKMCEETRARIKVLDGPVNTPDRIVLI------ 123
Query: 102 KETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALL 161
+G+EE E S A+L
Sbjct: 124 ----------------SGKEEP--------------------------EAYMSPAMDAVL 141
Query: 162 LVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI--------- 212
VF R+ + P+ + D +N S +RLLV STQ L+GK G +IK I
Sbjct: 142 RVFRRVSGL-PDNDDDDVQNAGSVFSSVRLLVASTQAINLIGKQGSLIKSIVENSGASVR 200
Query: 213 ----DKLPTCALASDEVVQITGEVDTVRKALKLISHQL 246
++ P A + +V + GE + KAL+ I L
Sbjct: 201 ILSEEETPFYAAQDERIVDLQGEALKILKALEAIVGHL 238
>gi|302803885|ref|XP_002983695.1| hypothetical protein SELMODRAFT_445667 [Selaginella moellendorffii]
gi|300148532|gb|EFJ15191.1| hypothetical protein SELMODRAFT_445667 [Selaginella moellendorffii]
Length = 1020
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 94/350 (26%), Positives = 152/350 (43%), Gaps = 61/350 (17%)
Query: 325 DERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVL 384
+ ++G VIGK G+ I+ L+ ETG IK+ + ++ TEDR ++IS + + A+L
Sbjct: 511 EWKIGKVIGKKGSQIKKLRDETGAHIKIADPMNTTEDRAVLISSKNEGGSDRTCAELALL 570
Query: 385 RVQTRIAR---------AI-PDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAY 434
V T + + AI P ++ +TRLL+A +Q G L+GK G+ I +R S A
Sbjct: 571 EVVTILLKDGDGATPSAAIGPQHQGSPNLTRLLIAGSQAGSLIGKAGANIKNIRGSSSAS 630
Query: 435 IRILGKDQIPKC--ASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNP 492
+R+L DQ+P C A E + +V I+GE AVQ A+ + LR + ++ P+
Sbjct: 631 VRVLPSDQLPLCSAACETDRLVQISGEVAAVQMAIELVAANLRDNPPKETVPTTPEAKTA 690
Query: 493 TFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHH-- 550
FL + G PH +A H
Sbjct: 691 YFL--------------------------------GIDGKTGQQVLLPHSSVAAVYGHSP 718
Query: 551 --IHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVV--------VPRSLV 600
+ G+ PH P P G++ P+ + P R P++ VP S++
Sbjct: 719 SSMALYGLQPH-PLAGPAYAGGVLAQAPPL----YANPAARLPPMLPKVSAEMSVPSSVM 773
Query: 601 PIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQS 650
+ G+ G + +R +S A I + K + E I+ GT EQ +S
Sbjct: 774 GGLIGKGGFHISHMRSVSGATIKVNGSKESSVERTILFEGTQEQCFRKKS 823
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 148/357 (41%), Gaps = 100/357 (28%)
Query: 56 KIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERS 115
KI VIGK G + ++ +TG I++ + ++ +++R V+I S
Sbjct: 513 KIGKVIGKKGSQIKKLRDETGAHIKIADPMNTTEDRAVLIS------------------S 554
Query: 116 ENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVE----VE 171
+N G + + A+ ALL V +++
Sbjct: 555 KNEGGSDRTCAE------------------------------LALLEVVTILLKDGDGAT 584
Query: 172 PETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI-------------DKLPTC 218
P + Q + S + RLL+ +Q G L+GK G IK I D+LP C
Sbjct: 585 PSAAIGPQH--QGSPNLTRLLIAGSQAGSLIGKAGANIKNIRGSSSASVRVLPSDQLPLC 642
Query: 219 ALA--SDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNP-------------TG 263
+ A +D +VQI+GEV V+ A++L++ L DN P+ E++P P TG
Sbjct: 643 SAACETDRLVQISGEVAAVQMAIELVAANLRDNPPK--ETVPTTPEAKTAYFLGIDGKTG 700
Query: 264 PSHPLPDHSVSSQGAPYATGHRDVADIHL-PMPPSIPKFHESGVLDRPKP--------SP 314
LP SV+ A Y +A L P P + P + GVL + P P
Sbjct: 701 QQVLLPHSSVA---AVYGHSPSSMALYGLQPHPLAGPAY-AGGVLAQAPPLYANPAARLP 756
Query: 315 EIL---TFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
+L + + +GG+IGKGG I ++ +G IKV + + +R I+ G
Sbjct: 757 PMLPKVSAEMSVPSSVMGGLIGKGGFHISHMRSVSGATIKVNGSKESSVERTILFEG 813
>gi|344306639|ref|XP_003421993.1| PREDICTED: poly(rC)-binding protein 3 [Loxodonta africana]
Length = 396
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 104/362 (28%), Positives = 162/362 (44%), Gaps = 62/362 (17%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R++ I+GP
Sbjct: 71 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT------ 122
Query: 377 SAPQDAVLRVQTRIARAI-----------PDNREQTVMTRLLVASNQIGCLLGKGGSIIA 425
DA+ + IA P + V RL+V ++Q G L+GKGGS I
Sbjct: 123 ----DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 178
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDA-FP 484
E+R+ +GA +++ G D +P + E V I+G +A+ + + QI + + A P
Sbjct: 179 EIRESTGAQVQVAG-DMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIP 234
Query: 485 SINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGP----SFHKFDAVGGP-PPPGSFH 539
+P + + F G + + G Y+ P H+ P PP G +
Sbjct: 235 YRPKPASTPVI--------FAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTN 286
Query: 540 PHDDHSAFMHHIHRPG--MPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPR 597
P AF PG +P H + Q LM G G PP + +P
Sbjct: 287 P-----AF------PGEKLPLHSSEEA----QNLM--GQSSGLD--ASPPASTHELTIPN 327
Query: 598 SLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVM 657
L+ I G G + +IRQ+S A+I I + G++E I I+G+P AQ LI A +
Sbjct: 328 DLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGSPANISLAQYLINARLT 387
Query: 658 SE 659
SE
Sbjct: 388 SE 389
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 111/255 (43%), Gaps = 45/255 (17%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI 212
T + KA ++ + E + +++ T LRL+V ++Q G L+GKGG IK+I
Sbjct: 122 TDAIFKAFAMIAYKFEE-DIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 180
Query: 213 ------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGN 260
D LP +++ V I+G D + + +K I +L++ P+ +IP
Sbjct: 181 RESTGAQVQVAGDMLPN---STERAVTISGTPDAIIQCVKQICVVMLESPPKG-ATIPYR 236
Query: 261 PTGPSHPL---PDHSVSSQGAPYATGHRD-------VADIHLPMPP---SIPKF------ 301
P S P+ + + QG YA H D +A P PP + P F
Sbjct: 237 PKPASTPVIFAGGQAYTIQGQ-YAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLP 295
Query: 302 -HES-------GVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVM 353
H S G SP T L ++ +G +IG+ G I ++Q +G IK+
Sbjct: 296 LHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIA 355
Query: 354 EAVSGTEDRLIVISG 368
A G+ +R I I+G
Sbjct: 356 NATEGSSERQITITG 370
>gi|302814684|ref|XP_002989025.1| hypothetical protein SELMODRAFT_447544 [Selaginella moellendorffii]
gi|300143126|gb|EFJ09819.1| hypothetical protein SELMODRAFT_447544 [Selaginella moellendorffii]
Length = 1034
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 98/344 (28%), Positives = 152/344 (44%), Gaps = 61/344 (17%)
Query: 325 DERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVL 384
+ ++G VIGK G+ I+ L+ ETG IK+ + ++ TEDR ++IS S + A+L
Sbjct: 510 EWKIGKVIGKKGSQIKKLRDETGAHIKIADPMNTTEDRAVLISSKNEGVSDRSCAELALL 569
Query: 385 RVQTRIAR---------AI-PDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAY 434
V T + + AI P ++ +TRLL+A +Q G L+GK G+ I +R S A
Sbjct: 570 EVVTILLKDGDGATPSAAIGPQHQGSPNLTRLLIAGSQAGSLIGKAGANIKNIRGSSSAS 629
Query: 435 IRILGKDQIPKC--ASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNP 492
+R+L DQ+P C A E + +V I+GE AVQ A+ + L RD P P NP
Sbjct: 630 VRVLPSDQLPLCSAACETDRLVQISGEVAAVQMAIELVAANL-----RDNPPKETVPTNP 684
Query: 493 TFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHH-- 550
+ F+G + G PH +A H
Sbjct: 685 E-----AKTAYFLG----------------------IDGNTGQQVLLPHSSVAAVYGHSP 717
Query: 551 --IHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVV--------VPRSLV 600
+ G+ PH P P G++ P+ + P R P++ VP S++
Sbjct: 718 SSMALYGLQPH-PLAGPAYAGGVLAQAPPL----YANPAARLPPMLPKVSAEMSVPSSVM 772
Query: 601 PIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQ 644
+ G+ G + +R +S A I + K + E I+ GT EQ
Sbjct: 773 GGLIGKGGFHISHMRSVSGATIKVNGSKESSVERTILFEGTQEQ 816
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 94/357 (26%), Positives = 149/357 (41%), Gaps = 100/357 (28%)
Query: 56 KIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERS 115
KI VIGK G + ++ +TG I++ + ++ +++R V+I S
Sbjct: 512 KIGKVIGKKGSQIKKLRDETGAHIKIADPMNTTEDRAVLIS------------------S 553
Query: 116 ENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVE----VE 171
+N G + S A + ALL V +++
Sbjct: 554 KNEGVSDRSCA------------------------------ELALLEVVTILLKDGDGAT 583
Query: 172 PETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI-------------DKLPTC 218
P + Q + S + RLL+ +Q G L+GK G IK I D+LP C
Sbjct: 584 PSAAIGPQH--QGSPNLTRLLIAGSQAGSLIGKAGANIKNIRGSSSASVRVLPSDQLPLC 641
Query: 219 ALA--SDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNP-------------TG 263
+ A +D +VQI+GEV V+ A++L++ L DN P+ E++P NP TG
Sbjct: 642 SAACETDRLVQISGEVAAVQMAIELVAANLRDNPPK--ETVPTNPEAKTAYFLGIDGNTG 699
Query: 264 PSHPLPDHSVSSQGAPYATGHRDVADIHL-PMPPSIPKFHESGVLDRPKP--------SP 314
LP SV+ A Y +A L P P + P + GVL + P P
Sbjct: 700 QQVLLPHSSVA---AVYGHSPSSMALYGLQPHPLAGPAY-AGGVLAQAPPLYANPAARLP 755
Query: 315 EIL---TFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
+L + + +GG+IGKGG I ++ +G IKV + + +R I+ G
Sbjct: 756 PMLPKVSAEMSVPSSVMGGLIGKGGFHISHMRSVSGATIKVNGSKESSVERTILFEG 812
>gi|297803502|ref|XP_002869635.1| hypothetical protein ARALYDRAFT_492216 [Arabidopsis lyrata subsp.
lyrata]
gi|297315471|gb|EFH45894.1| hypothetical protein ARALYDRAFT_492216 [Arabidopsis lyrata subsp.
lyrata]
Length = 495
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 96/168 (57%), Gaps = 9/168 (5%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISA 378
FR++ +VG +IG+ G I+ + +ET IKV++ T DR+++ISG P+ +S
Sbjct: 76 FRMIVPVSKVGAIIGRKGDFIKKMCEETRARIKVLDGPVNTPDRIVLISGKEEPEAYMSP 135
Query: 379 PQDAVLRVQTRIARAIPDNREQTVM--------TRLLVASNQIGCLLGKGGSIIAEMRKL 430
DAVLRV R++ +PDN + V RLLVAS Q L+GK GS+I + +
Sbjct: 136 AMDAVLRVFRRVS-GLPDNDDDDVQNAGSAFCSVRLLVASTQAINLIGKQGSLIKSIVEN 194
Query: 431 SGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHF 478
SGA +RIL +++ P A+++E +V + GE + +AL I LR
Sbjct: 195 SGASVRILSEEETPFYAAQDERIVDLQGEALKILKALEAIVGHLRKFL 242
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 93/218 (42%), Gaps = 62/218 (28%)
Query: 42 FPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNK 101
+PG +FR++ PVSK+ +IG+ G+ + ++ ++T I+V + + +R+V+I
Sbjct: 70 WPGDCVFRMIVPVSKVGAIIGRKGDFIKKMCEETRARIKVLDGPVNTPDRIVLI------ 123
Query: 102 KETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALL 161
+G+EE E S A+L
Sbjct: 124 ----------------SGKEEP--------------------------EAYMSPAMDAVL 141
Query: 162 LVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI--------- 212
VF R+ + P+ + D +N S+ +RLLV STQ L+GK G +IK I
Sbjct: 142 RVFRRVSGL-PDNDDDDVQNAGSAFCSVRLLVASTQAINLIGKQGSLIKSIVENSGASVR 200
Query: 213 ----DKLPTCALASDEVVQITGEVDTVRKALKLISHQL 246
++ P A + +V + GE + KAL+ I L
Sbjct: 201 ILSEEETPFYAAQDERIVDLQGEALKILKALEAIVGHL 238
>gi|356530338|ref|XP_003533739.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 443
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 102/362 (28%), Positives = 162/362 (44%), Gaps = 44/362 (12%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISA 378
FRL+ +VG +IG+ G +I+ + +ET I+V++A GT DR++++SG P+ +S
Sbjct: 55 FRLIVPVGKVGSIIGRKGELIKKMCEETRSRIRVLDAPLGTPDRIVLVSGKEDPEAALSP 114
Query: 379 PQDAVLRVQTRI---ARAIPDNREQTV-----MTRLLVASNQIGCLLGKGGSIIAEMRKL 430
DAV+R+ R+ + +N+E RLLVAS Q L+GK GS+I +++
Sbjct: 115 AMDAVVRIFKRVSGFSETDAENQESAAGLAFSSIRLLVASTQAINLIGKQGSLIKSIQEN 174
Query: 431 SGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFF-RDAFPSINRP 489
+ A +R+L D++ A+ NE +V I GE V +AL + LR P +
Sbjct: 175 TSASVRVLSGDEVQFYATANERIVEIQGEALKVLKALEAVVGHLRKFLVDHSVLPLFEKT 234
Query: 490 LN-PTFLDQVSPFPSFIGRRELSPPGMYSNFG--PSFHKFDAVGGPPPPGSFHPHDDHSA 546
N PT D+ + ++ + L S F P K D+V D S
Sbjct: 235 YNAPTSQDRQA--ETWSDKSLLHTSSRTSIFADIPLSTKRDSVLA----------DRESQ 282
Query: 547 FMHHIHRPGMPPHMPDMKPWG--PQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQ 604
+ M + D G L VG P+ V V+ +P+
Sbjct: 283 LDLFLPSSTMSLYGQDSSLSGVHSSALGRVGAPI------------VTTVIQTMQIPLSY 330
Query: 605 GED-----GACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
ED G ++ IR+ S A +T+ + + E V+ I GT + AQ LIQ + S
Sbjct: 331 AEDIIGIQGTNIEYIRRTSGAILTVQESRV-PDEIVVEIKGTSSEVQTAQQLIQDVISSH 389
Query: 660 TE 661
E
Sbjct: 390 KE 391
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 103/232 (44%), Gaps = 66/232 (28%)
Query: 42 FPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNK 101
+PG +FR++ PV K+ +IG+ GE++ ++ ++T IRV + G+ +R+V++
Sbjct: 49 WPGDCVFRLIVPVGKVGSIIGRKGELIKKMCEETRSRIRVLDAPLGTPDRIVLV------ 102
Query: 102 KETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALL 161
+G+E + E S A++
Sbjct: 103 ----------------SGKE--------------------------DPEAALSPAMDAVV 120
Query: 162 LVFERMVEVEPETEVADQENTKSSKF-VLRLLVLSTQVGCLLGKGGCVIKQI-------- 212
+F+R V ET+ +QE+ F +RLLV STQ L+GK G +IK I
Sbjct: 121 RIFKR-VSGFSETDAENQESAAGLAFSSIRLLVASTQAINLIGKQGSLIKSIQENTSASV 179
Query: 213 -----DKLPTCALASDEVVQITGEVDTVRKALK-LISHQLLDNSPRDHESIP 258
D++ A A++ +V+I GE V KAL+ ++ H L DH +P
Sbjct: 180 RVLSGDEVQFYATANERIVEIQGEALKVLKALEAVVGH--LRKFLVDHSVLP 229
>gi|9957161|gb|AAG09238.1|AF176327_1 alphaCP-3 [Mus musculus]
Length = 339
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 105/362 (29%), Positives = 161/362 (44%), Gaps = 62/362 (17%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R++ I+GP
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT------ 65
Query: 377 SAPQDAVLRVQTRIARAI-----------PDNREQTVMTRLLVASNQIGCLLGKGGSIIA 425
DA+ + IA P + V RL+V ++Q G L+GKGGS I
Sbjct: 66 ----DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 121
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDA-FP 484
E+R+ +GA +++ G D +P + E V I+G +A+ + + QI + + A P
Sbjct: 122 EIRESTGAQVQVAG-DMLP---NSTERAVTISGTPDAIFQCVKQICVVMLESPPKGATIP 177
Query: 485 SINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGP----SFHKFDAVGGP-PPPGSFH 539
+P + F G + + G Y+ P H+ P PP G +
Sbjct: 178 YRPKPACTPVI--------FAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTN 229
Query: 540 PHDDHSAFMHHIHRPG--MPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPR 597
P AF PG +P H + Q LM G G PP + +P
Sbjct: 230 P-----AF------PGEKLPLHSSEEA----QNLM--GQSSGLD--ASPPASTHELTIPN 270
Query: 598 SLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVM 657
L+ I G G + +IRQ+S A+I I + G++E I I+GTP AQ LI A +
Sbjct: 271 DLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARLT 330
Query: 658 SE 659
SE
Sbjct: 331 SE 332
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 97/219 (44%), Gaps = 44/219 (20%)
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQI------------DKLPTCALASDEVVQITGEVDTVR 236
LRL+V ++Q G L+GKGG IK+I D LP +++ V I+G D +
Sbjct: 100 LRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN---STERAVTISGTPDAIF 156
Query: 237 KALKLISHQLLDNSPRDHESIPGNPTGPSHPL---PDHSVSSQGAPYATGHRD------- 286
+ +K I +L++ P+ +IP P P+ + + QG YA H D
Sbjct: 157 QCVKQICVVMLESPPKG-ATIPYRPKPACTPVIFAGGQAYTIQGQ-YAIPHPDQLTKLHQ 214
Query: 287 VADIHLPMPP---SIPKF-------HES-------GVLDRPKPSPEILTFRLLCHDERVG 329
+A P PP + P F H S G SP T L ++ +G
Sbjct: 215 LAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIG 274
Query: 330 GVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
+IG+ G I ++Q +G IK+ A G+ +R I I+G
Sbjct: 275 CIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITG 313
>gi|395536907|ref|XP_003770450.1| PREDICTED: poly(rC)-binding protein 3 isoform 1 [Sarcophilus
harrisii]
Length = 339
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 158/356 (44%), Gaps = 50/356 (14%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R++ I+GP D
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT--DAIF 69
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + + I ++ ++ + V RL+V ++Q G L+GKGGS I E+R+ +GA
Sbjct: 70 KAFAMIAYKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDA-FPSINRPLNP 492
+++ G D +P + E V I+G +A+ + + QI + + A P +P +
Sbjct: 130 QVQVAG-DMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPAST 185
Query: 493 TFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIH 552
+ F G + + G Y+ PH D +H +
Sbjct: 186 PVI--------FAGGQAYTIQGQYA---------------------IPHPDQLTKLHQLA 216
Query: 553 RPGMP-PHMPDMKPWGPQGLMEVGGPMGFPDFVG--------PPHRRVPVVVPRSLVPII 603
P P + P P + + + +G PP + +P L+ I
Sbjct: 217 MQQTPFPPLGQTTPAFPGEKLPLHSSEEAQNLMGQSPGLDASPPASTHELTIPNDLIGCI 276
Query: 604 QGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
G G + +IRQ+S A+I I + G++E I I+GTP AQ LI A + SE
Sbjct: 277 IGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARLTSE 332
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 104/229 (45%), Gaps = 46/229 (20%)
Query: 181 NTKSSK--FVLRLLVLSTQVGCLLGKGGCVIKQI------------DKLPTCALASDEVV 226
+T +SK LRL+V ++Q G L+GKGG IK+I D LP +++ V
Sbjct: 90 STATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN---STERAV 146
Query: 227 QITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPL---PDHSVSSQGAPYATG 283
I+G D + + +K I +L++ P+ +IP P S P+ + + QG YA
Sbjct: 147 TISGTPDAIIQCVKQICVVMLESPPKG-ATIPYRPKPASTPVIFAGGQAYTIQGQ-YAIP 204
Query: 284 HRD-------VADIHLPMPP---SIPKF----------HESGVLDRPKP----SPEILTF 319
H D +A P PP + P F E+ L P SP T
Sbjct: 205 HPDQLTKLHQLAMQQTPFPPLGQTTPAFPGEKLPLHSSEEAQNLMGQSPGLDASPPASTH 264
Query: 320 RLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
L ++ +G +IG+ G I ++Q +G IK+ A G+ +R I I+G
Sbjct: 265 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITG 313
>gi|395536911|ref|XP_003770452.1| PREDICTED: poly(rC)-binding protein 3 isoform 3 [Sarcophilus
harrisii]
Length = 318
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 156/348 (44%), Gaps = 55/348 (15%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R++ I+GP D
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT--DAIF 69
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + + I ++ ++ + V RL+V ++Q G L+GKGGS I E+R+ +GA
Sbjct: 70 KAFAMIAYKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDA-FPSINRPLNP 492
+++ G D +P + E V I+G +A+ + + QI + + A P +P +
Sbjct: 130 QVQVAG-DMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPAST 185
Query: 493 TFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIH 552
+ F G + + G Y+ PH D + +H
Sbjct: 186 PVI--------FAGGQAYTIQGQYA---------------------IPHPD----LTKLH 212
Query: 553 RPGMPPHMPDMKPWGPQGLMEVGGPMGFPDF-VGPPHRRVPVVVPRSLVPIIQGEDGACL 611
+ M P+ P G FP PP + +P L+ I G G +
Sbjct: 213 QLAM-----QQTPFPPLGQTTP----AFPGLDASPPASTHELTIPNDLIGCIIGRQGTKI 263
Query: 612 KQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
+IRQ+S A+I I + G++E I I+GTP AQ LI A + SE
Sbjct: 264 NEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARLTSE 311
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 106/218 (48%), Gaps = 38/218 (17%)
Query: 181 NTKSSK--FVLRLLVLSTQVGCLLGKGGCVIKQI------------DKLPTCALASDEVV 226
+T +SK LRL+V ++Q G L+GKGG IK+I D LP +++ V
Sbjct: 90 STATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN---STERAV 146
Query: 227 QITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPL---PDHSVSSQGAPYATG 283
I+G D + + +K I +L++ P+ +IP P S P+ + + QG YA
Sbjct: 147 TISGTPDAIIQCVKQICVVMLESPPKG-ATIPYRPKPASTPVIFAGGQAYTIQGQ-YAIP 204
Query: 284 HRDVADIH------LPMPP---SIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGK 334
H D+ +H P PP + P F LD SP T L ++ +G +IG+
Sbjct: 205 HPDLTKLHQLAMQQTPFPPLGQTTPAFPG---LDA---SPPASTHELTIPNDLIGCIIGR 258
Query: 335 GGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG-PAH 371
G I ++Q +G IK+ A G+ +R I I+G PA+
Sbjct: 259 QGTKINEIRQMSGAQIKIANATEGSSERQITITGTPAN 296
>gi|255574127|ref|XP_002527979.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223532605|gb|EEF34391.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 416
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 100/372 (26%), Positives = 165/372 (44%), Gaps = 49/372 (13%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISA 378
+RL+ +VG +IG+ G +I+ + ET I++++ DR+++ISG P+ +S
Sbjct: 29 YRLIVPVAKVGSIIGRKGELIKKMCVETRARIRILDGPPSISDRIVLISGKEEPEAALSP 88
Query: 379 PQDAVLRVQTRIA-----------RAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEM 427
DAVLRV R++ A+ +V +LLVAS+Q L+GK GS I +
Sbjct: 89 AMDAVLRVFKRVSGLSAGEADAMGSAVAGAAFSSV--KLLVASSQAINLIGKQGSTIKSI 146
Query: 428 RKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFF-------- 479
++ + A +R+L +++ P A+ +E +V I+GE V +AL + +LR
Sbjct: 147 QESTAATVRVLAEEEAPSYATSDERIVEIHGEASKVLKALEGVIGQLRKFLVDHTVVPIF 206
Query: 480 ---RDAFPSINRPLNPTFLDQVSP-FPSFIGRRELSPP--GMYSNFGPSFHKFDAVGGPP 533
+A S +R + D+ P PS P G+ S + S + ++
Sbjct: 207 EKTHNAIISQDRSADAR-ADKTQPSIPSLTALHSAPAPQVGIGSEYSLSLKRDPSI---- 261
Query: 534 PPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWG--PQGLMEVGGPMGFPDFVGPPHRRV 591
+D S I + G+ D G P GL P+
Sbjct: 262 -------YDRESHLDQKIPQSGLLLFGQDSSLGGLRPTGLGRAAAPI-------VTQMTQ 307
Query: 592 PVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSL 651
+ VP S I G G+ + IR+ S A +TI + + E + I GT Q AQ L
Sbjct: 308 TMQVPLSYAEDIIGVGGSNIAYIRRTSGAILTIQESRT-PDEITVEIKGTASQVQMAQQL 366
Query: 652 IQAFVMSETETT 663
IQ F+ ++ E+T
Sbjct: 367 IQEFISNQKEST 378
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 91/219 (41%), Gaps = 62/219 (28%)
Query: 42 FPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNK 101
+PG ++R++ PV+K+ +IG+ GE++ ++ +T IR+ + +R+V+I
Sbjct: 23 WPGDNVYRLIVPVAKVGSIIGRKGELIKKMCVETRARIRILDGPPSISDRIVLI------ 76
Query: 102 KETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALL 161
+G+EE E S A+L
Sbjct: 77 ----------------SGKEEP--------------------------EAALSPAMDAVL 94
Query: 162 LVFERMVEVEPETEVADQENTKSSKFV-LRLLVLSTQVGCLLGKGGCVIKQI-------- 212
VF+R+ + A + F ++LLV S+Q L+GK G IK I
Sbjct: 95 RVFKRVSGLSAGEADAMGSAVAGAAFSSVKLLVASSQAINLIGKQGSTIKSIQESTAATV 154
Query: 213 -----DKLPTCALASDEVVQITGEVDTVRKALKLISHQL 246
++ P+ A + + +V+I GE V KAL+ + QL
Sbjct: 155 RVLAEEEAPSYATSDERIVEIHGEASKVLKALEGVIGQL 193
>gi|432931639|ref|XP_004081713.1| PREDICTED: poly(rC)-binding protein 3-like isoform 2 [Oryzias
latipes]
Length = 343
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 101/352 (28%), Positives = 157/352 (44%), Gaps = 40/352 (11%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R++ I+GP D
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT--DTIF 71
Query: 377 SAPQDAVLRVQTRIARAI---PDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + + I ++ P + V RL+V ++Q G L+GKGGS I EMR+ +GA
Sbjct: 72 KAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGA 131
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDA-FPSINRPLN- 491
+++ G D +P + E V I+G EA+ + + QI + + A P +P +
Sbjct: 132 QVQVAG-DMLP---NSTERAVTISGTPEAIIQCVKQICVVMLESPPKGATIPYRPKPAST 187
Query: 492 PTFLD--QVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFH-PHDDHSAFM 548
P QVS M P++ G + PH D +
Sbjct: 188 PVIFSGGQVSAELLKTTLTPNLTLLMQQKC-PAYTI---------QGQYAIPHPD----L 233
Query: 549 HHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDF-VGPPHRRVPVVVPRSLVPIIQGED 607
+H+ M P+ P G FP PP + +P L+ I G
Sbjct: 234 TKLHQLAM-----QQTPFTPLGQTTP----AFPGLDAAPPASTHELTIPNDLIGCIIGRQ 284
Query: 608 GACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
G + +IRQ+S A+I I + G++E I I+GTP AQ LI A + SE
Sbjct: 285 GTKINEIRQMSGAQIKIANAMEGSSERQITITGTPANISLAQYLINARLTSE 336
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 99/227 (43%), Gaps = 51/227 (22%)
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQI------------DKLPTCALASDEVVQITGEVDTVR 236
LRL+V ++Q G L+GKGG IK++ D LP +++ V I+G + +
Sbjct: 102 LRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLPN---STERAVTISGTPEAII 158
Query: 237 KALKLISHQLLDNSPRDHESIPGNPTGPSHPL---------------------------- 268
+ +K I +L++ P+ +IP P S P+
Sbjct: 159 QCVKQICVVMLESPPKG-ATIPYRPKPASTPVIFSGGQVSAELLKTTLTPNLTLLMQQKC 217
Query: 269 PDHSVSSQGAPYATGHRDVADIH---LPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHD 325
P +++ Q YA H D+ +H + P P + +P T L +
Sbjct: 218 PAYTIQGQ---YAIPHPDLTKLHQLAMQQTPFTPLGQTTPAFPGLDAAPPASTHELTIPN 274
Query: 326 ERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG-PAH 371
+ +G +IG+ G I ++Q +G IK+ A+ G+ +R I I+G PA+
Sbjct: 275 DLIGCIIGRQGTKINEIRQMSGAQIKIANAMEGSSERQITITGTPAN 321
>gi|363735768|ref|XP_003641607.1| PREDICTED: poly(rC)-binding protein 3-like [Gallus gallus]
gi|449506326|ref|XP_002191682.2| PREDICTED: poly(rC)-binding protein 3 [Taeniopygia guttata]
Length = 339
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 157/360 (43%), Gaps = 58/360 (16%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R++ I+GP D
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT--DAIF 69
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + + I ++ ++ + V RL+V ++Q G L+GKGGS I E+R+ +GA
Sbjct: 70 KAFAMIAYKFEEDITNSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDA-FPSINRPLNP 492
+++ G D +P + E V I+G +A+ + + QI + + A P +P +
Sbjct: 130 QVQVAG-DMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPAST 185
Query: 493 TFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIH 552
+ F G + + G Y+ PH D +H +
Sbjct: 186 PVI--------FAGGQAYTIQGQYA---------------------IPHPDQLTKLHQLA 216
Query: 553 RPGMP--------PHMPDMK-----PWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSL 599
P P P K Q LM G G PP + +P L
Sbjct: 217 MQQTPFTPLGQTTPAFPGEKLPLHSSEEAQNLM--GQSSGLD--ASPPASTHELTIPNDL 272
Query: 600 VPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
+ I G G + +IRQ+S A+I I + G++E I I+GTP AQ LI A + SE
Sbjct: 273 IGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARLTSE 332
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 114/259 (44%), Gaps = 46/259 (17%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI 212
T + KA ++ + E + +++ T LRL+V ++Q G L+GKGG IK+I
Sbjct: 65 TDAIFKAFAMIAYKFEE-DITNSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 213 ------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGN 260
D LP +++ V I+G D + + +K I +L++ P+ +IP
Sbjct: 124 RESTGAQVQVAGDMLPN---STERAVTISGTPDAIIQCVKQICVVMLESPPKG-ATIPYR 179
Query: 261 PTGPSHPL---PDHSVSSQGAPYATGHRD-VADIH---------LPMPPSIPKF------ 301
P S P+ + + QG YA H D + +H P+ + P F
Sbjct: 180 PKPASTPVIFAGGQAYTIQGQ-YAIPHPDQLTKLHQLAMQQTPFTPLGQTTPAFPGEKLP 238
Query: 302 -HES-------GVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVM 353
H S G SP T L ++ +G +IG+ G I ++Q +G IK+
Sbjct: 239 LHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIA 298
Query: 354 EAVSGTEDRLIVISG-PAH 371
A G+ +R I I+G PA+
Sbjct: 299 NATEGSSERQITITGTPAN 317
>gi|297735477|emb|CBI17917.3| unnamed protein product [Vitis vinifera]
Length = 364
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 96/334 (28%), Positives = 146/334 (43%), Gaps = 40/334 (11%)
Query: 344 QETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRI---------ARAI 394
+ET I+V++ GT DR+++ISG P+ +S DAV+RV R+ +A
Sbjct: 3 EETRARIRVLDGAVGTSDRIVLISGREEPEAPLSPAMDAVIRVFKRVTGLSESEGDGKAY 62
Query: 395 PDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVV 454
RLLVAS Q L+GK GS+I +++ +GA +R+L D++P A+ +E +V
Sbjct: 63 GAAGVAFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEVPFYAAADERIV 122
Query: 455 LINGEFEAVQEALFQITTRLRHHFFRD--AFPSINRPLNPTFLDQVSPFPSFIGRREL-- 510
+ GE VQ+AL + LR F D P R N T + Q ++ + L
Sbjct: 123 ELQGEALKVQKALEAVVGHLR-KFLVDHSVLPLFERTYNAT-ISQDRQSDTWADKSLLHG 180
Query: 511 -SPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWG-- 567
S GM S++ P + D M H G+P + + G
Sbjct: 181 TSQTGMGSDY------------SLPAKRESLYLDRETQMEH---SGLPMYGQEHGLSGIR 225
Query: 568 PQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDP 627
GL G P+ + +P S I G GA + IR+ S A +T+ +
Sbjct: 226 SSGLGRAGAPI-------VTQIAQTMQIPLSYAEDIIGIGGANIAYIRRTSGAILTVQES 278
Query: 628 KPGATETVIIISGTPEQTHAAQSLIQAFVMSETE 661
+ E + I GT Q AQ LIQ F+ + E
Sbjct: 279 RGLPDEITVEIKGTSSQVQTAQQLIQEFISNHKE 312
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 54/115 (46%), Gaps = 17/115 (14%)
Query: 159 ALLLVFERMVEVEPETEVADQENTKSSKFV-LRLLVLSTQVGCLLGKGGCVIKQI----- 212
A++ VF+R+ + F +RLLV STQ L+GK G +IK I
Sbjct: 41 AVIRVFKRVTGLSESEGDGKAYGAAGVAFCSIRLLVASTQAINLIGKQGSLIKSIQESTG 100
Query: 213 --------DKLPTCALASDEVVQITGEVDTVRKALK-LISHQLLDNSPRDHESIP 258
D++P A A + +V++ GE V+KAL+ ++ H L DH +P
Sbjct: 101 ASVRVLSGDEVPFYAAADERIVELQGEALKVQKALEAVVGH--LRKFLVDHSVLP 153
>gi|56566054|gb|AAV98363.1| poly(rC) binding protein 3 [Homo sapiens]
Length = 361
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 106/382 (27%), Positives = 162/382 (42%), Gaps = 80/382 (20%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R++ I+GP
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT------ 65
Query: 377 SAPQDAVLRVQTRIARAI-----------PDNREQTVMTRLLVASNQIGCLLGKGGSIIA 425
DA+ + IA P + V RL+V ++Q G L+GKGGS I
Sbjct: 66 ----DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 121
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAF-- 483
E+R+ +GA +++ G D +P + E V I+G +A+ + + QI + + A
Sbjct: 122 EIRESTGAQVQVAG-DMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIP 177
Query: 484 --------------------PSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSF 523
P N + L Q P P++ + G Y+ P
Sbjct: 178 YRPKPASTPVIFAGGQVRADPLAASTANLSLLLQHPPLPAYTIQ------GQYAIPHPDL 231
Query: 524 HKFDAVGGP----PPPGSFHPHDDHSAFMHHIHRPG--MPPHMPDMKPWGPQGLMEVGGP 577
K + PP G +P AF PG +P H + Q LM G
Sbjct: 232 TKLHQLAMQQTPLPPLGQTNP-----AF------PGEKLPLHSSEEA----QNLM--GQS 274
Query: 578 MGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVII 637
G PP + +P L+ I G G + +IRQ+S A+I I + G++E I
Sbjct: 275 SGLD--ASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQIT 332
Query: 638 ISGTPEQTHAAQSLIQAFVMSE 659
I+GTP AQ LI A + SE
Sbjct: 333 ITGTPANISLAQYLINARLTSE 354
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 101/245 (41%), Gaps = 70/245 (28%)
Query: 187 FVLRLLVLSTQVGCLLGKGGCVIKQI------------DKLPTCALASDEVVQITGEVDT 234
LRL+V ++Q G L+GKGG IK+I D LP +++ V I+G D
Sbjct: 98 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN---STERAVTISGTPDA 154
Query: 235 VRKALKLISHQLLDNSPRDHESIPGNPTGPSH---------------------------- 266
+ + +K I +L++ P+ +IP P S
Sbjct: 155 IIQCVKQICVVMLESPPKG-ATIPYRPKPASTPVIFAGGQVRADPLAASTANLSLLLQHP 213
Query: 267 PLPDHSVSSQGAPYATGHRDVADIH------LPMPP---SIPKF-------HES------ 304
PLP +++ Q YA H D+ +H P+PP + P F H S
Sbjct: 214 PLPAYTIQGQ---YAIPHPDLTKLHQLAMQQTPLPPLGQTNPAFPGEKLPLHSSEEAQNL 270
Query: 305 -GVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRL 363
G SP T L ++ +G +IG+ G I ++Q +G IK+ A G+ +R
Sbjct: 271 MGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQ 330
Query: 364 IVISG 368
I I+G
Sbjct: 331 ITITG 335
>gi|355560220|gb|EHH16906.1| hypothetical protein EGK_13160 [Macaca mulatta]
Length = 361
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 107/381 (28%), Positives = 165/381 (43%), Gaps = 78/381 (20%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R++ I+GP
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT------ 65
Query: 377 SAPQDAVLRVQTRIARAI-----------PDNREQTVMTRLLVASNQIGCLLGKGGSIIA 425
DA+ + IA P + V RL+V ++Q G L+GKGGS I
Sbjct: 66 ----DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 121
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDA-FP 484
E+R+ +GA +++ G D +P + E V I+G +A+ + + QI + + A P
Sbjct: 122 EIRESTGAQVQVAG-DMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIP 177
Query: 485 SINRP---------------------LNPTFLDQVSPFPSFI--GRRELSPPGMYSNFGP 521
+P N + L Q P P++ G+ + P +
Sbjct: 178 YRPKPASTPVIFAGGQVRADPLAASTANLSLLLQHPPLPAYTIQGQYAIPHPDLT----- 232
Query: 522 SFHKFDAVGGP-PPPGSFHPHDDHSAFMHHIHRPG--MPPHMPDMKPWGPQGLMEVGGPM 578
H+ P PP G +P AF PG +P H + Q LM G
Sbjct: 233 KLHQLAMQQTPFPPLGQTNP-----AF------PGEKLPLHSSEEA----QNLM--GQSS 275
Query: 579 GFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIII 638
G PP + +P L+ I G G + +IRQ+S A+I I + G++E I I
Sbjct: 276 GLD--ASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITI 333
Query: 639 SGTPEQTHAAQSLIQAFVMSE 659
+GTP AQ LI A + SE
Sbjct: 334 TGTPANISLAQYLINARLTSE 354
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 100/245 (40%), Gaps = 70/245 (28%)
Query: 187 FVLRLLVLSTQVGCLLGKGGCVIKQI------------DKLPTCALASDEVVQITGEVDT 234
LRL+V ++Q G L+GKGG IK+I D LP +++ V I+G D
Sbjct: 98 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN---STERAVTISGTPDA 154
Query: 235 VRKALKLISHQLLDNSPRDHESIPGNPTGPSH---------------------------- 266
+ + +K I +L++ P+ +IP P S
Sbjct: 155 IIQCVKQICVVMLESPPKG-ATIPYRPKPASTPVIFAGGQVRADPLAASTANLSLLLQHP 213
Query: 267 PLPDHSVSSQGAPYATGHRDVADIH------LPMPP---SIPKF-------HES------ 304
PLP +++ Q YA H D+ +H P PP + P F H S
Sbjct: 214 PLPAYTIQGQ---YAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNL 270
Query: 305 -GVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRL 363
G SP T L ++ +G +IG+ G I ++Q +G IK+ A G+ +R
Sbjct: 271 MGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQ 330
Query: 364 IVISG 368
I I+G
Sbjct: 331 ITITG 335
>gi|390478281|ref|XP_002761548.2| PREDICTED: poly(rC)-binding protein 3 [Callithrix jacchus]
Length = 393
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 107/381 (28%), Positives = 165/381 (43%), Gaps = 78/381 (20%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R++ I+GP
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT------ 97
Query: 377 SAPQDAVLRVQTRIARAI-----------PDNREQTVMTRLLVASNQIGCLLGKGGSIIA 425
DA+ + IA P + V RL+V ++Q G L+GKGGS I
Sbjct: 98 ----DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 153
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDA-FP 484
E+R+ +GA +++ G D +P + E V I+G +A+ + + QI + + A P
Sbjct: 154 EIRESTGAQVQVAG-DMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIP 209
Query: 485 SINRP---------------------LNPTFLDQVSPFPSFI--GRRELSPPGMYSNFGP 521
+P N + L Q P P++ G+ + P +
Sbjct: 210 YRPKPASTPVIFAGGQVRADPLAASTANLSLLLQHPPLPAYTIQGQYAIPHPDLT----- 264
Query: 522 SFHKFDAVGGP-PPPGSFHPHDDHSAFMHHIHRPG--MPPHMPDMKPWGPQGLMEVGGPM 578
H+ P PP G +P AF PG +P H + Q LM G
Sbjct: 265 KLHQLAMQQTPFPPLGQTNP-----AF------PGEKLPLHSSEEA----QNLM--GQSS 307
Query: 579 GFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIII 638
G PP + +P L+ I G G + +IRQ+S A+I I + G++E I I
Sbjct: 308 GLD--ASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITI 365
Query: 639 SGTPEQTHAAQSLIQAFVMSE 659
+GTP AQ LI A + SE
Sbjct: 366 TGTPANISLAQYLINARLTSE 386
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 113/279 (40%), Gaps = 71/279 (25%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI 212
T + KA ++ + E + +++ T LRL+V ++Q G L+GKGG IK+I
Sbjct: 97 TDAIFKAFAMIAYKFEE-DIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 155
Query: 213 ------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGN 260
D LP +++ V I+G D + + +K I +L++ P+ +IP
Sbjct: 156 RESTGAQVQVAGDMLPN---STERAVTISGTPDAIIQCVKQICVVMLESPPKG-ATIPYR 211
Query: 261 PTGPSH----------------------------PLPDHSVSSQGAPYATGHRDVADIH- 291
P S PLP +++ Q YA H D+ +H
Sbjct: 212 PKPASTPVIFAGGQVRADPLAASTANLSLLLQHPPLPAYTIQGQ---YAIPHPDLTKLHQ 268
Query: 292 -----LPMPP---SIPKF-------HES-------GVLDRPKPSPEILTFRLLCHDERVG 329
P PP + P F H S G SP T L ++ +G
Sbjct: 269 LAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIG 328
Query: 330 GVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
+IG+ G I ++Q +G IK+ A G+ +R I I+G
Sbjct: 329 CIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITG 367
>gi|194306633|ref|NP_001123613.1| poly(rC)-binding protein 3 isoform 2 [Homo sapiens]
gi|119629728|gb|EAX09323.1| poly(rC) binding protein 3, isoform CRA_a [Homo sapiens]
Length = 345
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 102/359 (28%), Positives = 155/359 (43%), Gaps = 82/359 (22%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R++ I+GP
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT------ 97
Query: 377 SAPQDAVLRVQTRIARAI-----------PDNREQTVMTRLLVASNQIGCLLGKGGSIIA 425
DA+ + IA P + V RL+V ++Q G L+GKGGS I
Sbjct: 98 ----DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 153
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPS 485
E+R+ +GA +++ G D +P + E V I+G +A+ + + QI + + +
Sbjct: 154 EIRESTGAQVQVAG-DMLP---NSTERAVTISGTPDAIIQCVKQICVVMLEAYTIQGQYA 209
Query: 486 INRPLNPTFLDQV----SPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHP- 540
I P + T L Q+ +PFP P G + P+F PG P
Sbjct: 210 IPHP-DLTKLHQLAMQQTPFP---------PLGQTN---PAF-----------PGEKLPL 245
Query: 541 HDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLV 600
H A Q LM G G PP + +P L+
Sbjct: 246 HSSEEA----------------------QNLM--GQSSGLD--ASPPASTHELTIPNDLI 279
Query: 601 PIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
I G G + +IRQ+S A+I I + G++E I I+GTP AQ LI A + SE
Sbjct: 280 GCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARLTSE 338
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 91/199 (45%), Gaps = 28/199 (14%)
Query: 188 VLRLLVLSTQVGCLLGKGGCVIKQI------------DKLPTCALASDEVVQITGEVDTV 235
LRL+V ++Q G L+GKGG IK+I D LP +++ V I+G D +
Sbjct: 131 TLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN---STERAVTISGTPDAI 187
Query: 236 RKALKLISHQLLD-NSPRDHESIPGNPTGPSHP--LPDHSVSSQGAPYA-TGHRDVA--D 289
+ +K I +L+ + + +IP HP H ++ Q P+ G + A
Sbjct: 188 IQCVKQICVVMLEAYTIQGQYAIP-------HPDLTKLHQLAMQQTPFPPLGQTNPAFPG 240
Query: 290 IHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCD 349
LP+ S + G SP T L ++ +G +IG+ G I ++Q +G
Sbjct: 241 EKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQ 300
Query: 350 IKVMEAVSGTEDRLIVISG 368
IK+ A G+ +R I I+G
Sbjct: 301 IKIANATEGSSERQITITG 319
>gi|119629731|gb|EAX09326.1| poly(rC) binding protein 3, isoform CRA_d [Homo sapiens]
Length = 393
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 107/381 (28%), Positives = 165/381 (43%), Gaps = 78/381 (20%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R++ I+GP
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT------ 97
Query: 377 SAPQDAVLRVQTRIARAI-----------PDNREQTVMTRLLVASNQIGCLLGKGGSIIA 425
DA+ + IA P + V RL+V ++Q G L+GKGGS I
Sbjct: 98 ----DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 153
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDA-FP 484
E+R+ +GA +++ G D +P + E V I+G +A+ + + QI + + A P
Sbjct: 154 EIRESTGAQVQVAG-DMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIP 209
Query: 485 SINRP---------------------LNPTFLDQVSPFPSFI--GRRELSPPGMYSNFGP 521
+P N + L Q P P++ G+ + P +
Sbjct: 210 YRPKPASTPVIFAGGQVRADPLAASTANLSLLLQHPPLPAYTIQGQYAIPHPDLT----- 264
Query: 522 SFHKFDAVGGP-PPPGSFHPHDDHSAFMHHIHRPG--MPPHMPDMKPWGPQGLMEVGGPM 578
H+ P PP G +P AF PG +P H + Q LM G
Sbjct: 265 KLHQLAMQQTPFPPLGQTNP-----AF------PGEKLPLHSSEEA----QNLM--GQSS 307
Query: 579 GFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIII 638
G PP + +P L+ I G G + +IRQ+S A+I I + G++E I I
Sbjct: 308 GLD--ASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITI 365
Query: 639 SGTPEQTHAAQSLIQAFVMSE 659
+GTP AQ LI A + SE
Sbjct: 366 TGTPANISLAQYLINARLTSE 386
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 113/279 (40%), Gaps = 71/279 (25%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI 212
T + KA ++ + E + +++ T LRL+V ++Q G L+GKGG IK+I
Sbjct: 97 TDAIFKAFAMIAYKFEE-DIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 155
Query: 213 ------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGN 260
D LP +++ V I+G D + + +K I +L++ P+ +IP
Sbjct: 156 RESTGAQVQVAGDMLPN---STERAVTISGTPDAIIQCVKQICVVMLESPPKG-ATIPYR 211
Query: 261 PTGPSH----------------------------PLPDHSVSSQGAPYATGHRDVADIH- 291
P S PLP +++ Q YA H D+ +H
Sbjct: 212 PKPASTPVIFAGGQVRADPLAASTANLSLLLQHPPLPAYTIQGQ---YAIPHPDLTKLHQ 268
Query: 292 -----LPMPP---SIPKF-------HES-------GVLDRPKPSPEILTFRLLCHDERVG 329
P PP + P F H S G SP T L ++ +G
Sbjct: 269 LAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIG 328
Query: 330 GVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
+IG+ G I ++Q +G IK+ A G+ +R I I+G
Sbjct: 329 CIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITG 367
>gi|332256670|ref|XP_003277439.1| PREDICTED: poly(rC)-binding protein 3 [Nomascus leucogenys]
Length = 393
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 107/381 (28%), Positives = 165/381 (43%), Gaps = 78/381 (20%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R++ I+GP
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT------ 97
Query: 377 SAPQDAVLRVQTRIARAI-----------PDNREQTVMTRLLVASNQIGCLLGKGGSIIA 425
DA+ + IA P + V RL+V ++Q G L+GKGGS I
Sbjct: 98 ----DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 153
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDA-FP 484
E+R+ +GA +++ G D +P + E V I+G +A+ + + QI + + A P
Sbjct: 154 EIRESTGAQVQVAG-DMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIP 209
Query: 485 SINRP---------------------LNPTFLDQVSPFPSFI--GRRELSPPGMYSNFGP 521
+P N + L Q P P++ G+ + P +
Sbjct: 210 YRPKPASTPVIFAGGQVRADPLAASTANLSLLLQHPPLPAYTIQGQYAIPHPDLT----- 264
Query: 522 SFHKFDAVGGP-PPPGSFHPHDDHSAFMHHIHRPG--MPPHMPDMKPWGPQGLMEVGGPM 578
H+ P PP G +P AF PG +P H + Q LM G
Sbjct: 265 KLHQLAMQQTPFPPLGQTNP-----AF------PGEKLPLHSSEEA----QNLM--GQSS 307
Query: 579 GFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIII 638
G PP + +P L+ I G G + +IRQ+S A+I I + G++E I I
Sbjct: 308 GLD--ASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITI 365
Query: 639 SGTPEQTHAAQSLIQAFVMSE 659
+GTP AQ LI A + SE
Sbjct: 366 TGTPANISLAQYLINARLTSE 386
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 113/279 (40%), Gaps = 71/279 (25%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI 212
T + KA ++ + E + +++ T LRL+V ++Q G L+GKGG IK+I
Sbjct: 97 TDAIFKAFAMIAYKFEE-DIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 155
Query: 213 ------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGN 260
D LP +++ V I+G D + + +K I +L++ P+ +IP
Sbjct: 156 RESTGAQVQVAGDMLPN---STERAVTISGTPDAIIQCVKQICVVMLESPPKG-ATIPYR 211
Query: 261 PTGPSH----------------------------PLPDHSVSSQGAPYATGHRDVADIH- 291
P S PLP +++ Q YA H D+ +H
Sbjct: 212 PKPASTPVIFAGGQVRADPLAASTANLSLLLQHPPLPAYTIQGQ---YAIPHPDLTKLHQ 268
Query: 292 -----LPMPP---SIPKF-------HES-------GVLDRPKPSPEILTFRLLCHDERVG 329
P PP + P F H S G SP T L ++ +G
Sbjct: 269 LAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIG 328
Query: 330 GVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
+IG+ G I ++Q +G IK+ A G+ +R I I+G
Sbjct: 329 CIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITG 367
>gi|15082311|gb|AAH12061.1| PCBP3 protein [Homo sapiens]
Length = 313
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 102/359 (28%), Positives = 155/359 (43%), Gaps = 82/359 (22%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R++ I+GP
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT------ 65
Query: 377 SAPQDAVLRVQTRIARAI-----------PDNREQTVMTRLLVASNQIGCLLGKGGSIIA 425
DA+ + IA P + V RL+V ++Q G L+GKGGS I
Sbjct: 66 ----DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 121
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPS 485
E+R+ +GA +++ G D +P + E V I+G +A+ + + QI + + +
Sbjct: 122 EIRESTGAQVQVAG-DMLP---NSTERAVTISGTPDAIIQCVKQICVVMLEAYTIQGQYA 177
Query: 486 INRPLNPTFLDQV----SPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHP- 540
I P + T L Q+ +PFP P G + P+F PG P
Sbjct: 178 IPHP-DLTKLHQLAMQQTPFP---------PLGQTN---PAF-----------PGEKLPL 213
Query: 541 HDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLV 600
H A Q LM G G PP + +P L+
Sbjct: 214 HSSEEA----------------------QNLM--GQSSGLD--ASPPASTHELTIPNDLI 247
Query: 601 PIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
I G G + +IRQ+S A+I I + G++E I I+GTP AQ LI A + SE
Sbjct: 248 GCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARLTSE 306
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 94/204 (46%), Gaps = 29/204 (14%)
Query: 187 FVLRLLVLSTQVGCLLGKGGCVIKQI------------DKLPTCALASDEVVQITGEVDT 234
LRL+V ++Q G L+GKGG IK+I D LP +++ V I+G D
Sbjct: 98 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN---STERAVTISGTPDA 154
Query: 235 VRKALKLISHQLLD-NSPRDHESIPGNPTGPSHP--LPDHSVSSQGAPYA-TGHRDVA-- 288
+ + +K I +L+ + + +IP HP H ++ Q P+ G + A
Sbjct: 155 IIQCVKQICVVMLEAYTIQGQYAIP-------HPDLTKLHQLAMQQTPFPPLGQTNPAFP 207
Query: 289 DIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGC 348
LP+ S + G SP T L ++ +G +IG+ G I ++Q +G
Sbjct: 208 GEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGA 267
Query: 349 DIKVMEAVSGTEDRLIVISG-PAH 371
IK+ A G+ +R I I+G PA+
Sbjct: 268 QIKIANATEGSSERQITITGTPAN 291
>gi|426218395|ref|XP_004003432.1| PREDICTED: poly(rC)-binding protein 3 isoform 1 [Ovis aries]
Length = 345
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 102/359 (28%), Positives = 155/359 (43%), Gaps = 82/359 (22%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R++ I+GP
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT------ 97
Query: 377 SAPQDAVLRVQTRIARAI-----------PDNREQTVMTRLLVASNQIGCLLGKGGSIIA 425
DA+ + IA P + V RL+V ++Q G L+GKGGS I
Sbjct: 98 ----DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 153
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPS 485
E+R+ +GA +++ G D +P + E V I+G +A+ + + QI + + +
Sbjct: 154 EIRESTGAQVQVAG-DMLP---NSTERAVTISGTPDAIIQCVKQICVVMLEAYTIQGQYA 209
Query: 486 INRPLNPTFLDQV----SPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHP- 540
I P + T L Q+ +PFP P G + P+F PG P
Sbjct: 210 IPHP-DLTKLHQLAMQQTPFP---------PLGQTN---PAF-----------PGEKLPL 245
Query: 541 HDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLV 600
H A Q LM G G PP + +P L+
Sbjct: 246 HSSEEA----------------------QNLM--GQSSGLD--ASPPASTHELTIPNDLI 279
Query: 601 PIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
I G G + +IRQ+S A+I I + G++E I I+GTP AQ LI A + SE
Sbjct: 280 GCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARLTSE 338
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 91/200 (45%), Gaps = 28/200 (14%)
Query: 187 FVLRLLVLSTQVGCLLGKGGCVIKQI------------DKLPTCALASDEVVQITGEVDT 234
LRL+V ++Q G L+GKGG IK+I D LP +++ V I+G D
Sbjct: 130 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN---STERAVTISGTPDA 186
Query: 235 VRKALKLISHQLLD-NSPRDHESIPGNPTGPSHP--LPDHSVSSQGAPYA-TGHRDVA-- 288
+ + +K I +L+ + + +IP HP H ++ Q P+ G + A
Sbjct: 187 IIQCVKQICVVMLEAYTIQGQYAIP-------HPDLTKLHQLAMQQTPFPPLGQTNPAFP 239
Query: 289 DIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGC 348
LP+ S + G SP T L ++ +G +IG+ G I ++Q +G
Sbjct: 240 GEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGA 299
Query: 349 DIKVMEAVSGTEDRLIVISG 368
IK+ A G+ +R I I+G
Sbjct: 300 QIKIANATEGSSERQITITG 319
>gi|395851184|ref|XP_003798146.1| PREDICTED: poly(rC)-binding protein 3 [Otolemur garnettii]
Length = 361
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 107/381 (28%), Positives = 165/381 (43%), Gaps = 78/381 (20%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R++ I+GP
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT------ 65
Query: 377 SAPQDAVLRVQTRIARAI-----------PDNREQTVMTRLLVASNQIGCLLGKGGSIIA 425
DA+ + IA P + V RL+V ++Q G L+GKGGS I
Sbjct: 66 ----DAIFKAFAMIAYKFEEDIVNSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 121
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDA-FP 484
E+R+ +GA +++ G D +P + E V I+G +A+ + + QI + + A P
Sbjct: 122 EIRESTGAQVQVAG-DMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIP 177
Query: 485 SINRP---------------------LNPTFLDQVSPFPSFI--GRRELSPPGMYSNFGP 521
+P N + L Q P P++ G+ + P +
Sbjct: 178 YRPKPASTPVIFAGGQVRADPLAASTANLSLLLQHPPLPAYTIQGQYAIPHPDLT----- 232
Query: 522 SFHKFDAVGGP-PPPGSFHPHDDHSAFMHHIHRPG--MPPHMPDMKPWGPQGLMEVGGPM 578
H+ P PP G +P AF PG +P H + Q LM G
Sbjct: 233 KLHQLAMQQTPFPPLGQANP-----AF------PGEKLPLHSSEEA----QNLM--GQSS 275
Query: 579 GFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIII 638
G PP + +P L+ I G G + +IRQ+S A+I I + G++E I I
Sbjct: 276 GLD--ASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITI 333
Query: 639 SGTPEQTHAAQSLIQAFVMSE 659
+GTP AQ LI A + SE
Sbjct: 334 TGTPANISLAQYLINARLTSE 354
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 113/279 (40%), Gaps = 71/279 (25%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI 212
T + KA ++ + E + +++ T LRL+V ++Q G L+GKGG IK+I
Sbjct: 65 TDAIFKAFAMIAYKFEE-DIVNSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 213 ------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGN 260
D LP +++ V I+G D + + +K I +L++ P+ +IP
Sbjct: 124 RESTGAQVQVAGDMLPN---STERAVTISGTPDAIIQCVKQICVVMLESPPKG-ATIPYR 179
Query: 261 PTGPSH----------------------------PLPDHSVSSQGAPYATGHRDVADIH- 291
P S PLP +++ Q YA H D+ +H
Sbjct: 180 PKPASTPVIFAGGQVRADPLAASTANLSLLLQHPPLPAYTIQGQ---YAIPHPDLTKLHQ 236
Query: 292 -----LPMPP---SIPKF-------HES-------GVLDRPKPSPEILTFRLLCHDERVG 329
P PP + P F H S G SP T L ++ +G
Sbjct: 237 LAMQQTPFPPLGQANPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIG 296
Query: 330 GVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
+IG+ G I ++Q +G IK+ A G+ +R I I+G
Sbjct: 297 CIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITG 335
>gi|327260862|ref|XP_003215252.1| PREDICTED: poly(rC)-binding protein 3-like [Anolis carolinensis]
Length = 339
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 157/360 (43%), Gaps = 58/360 (16%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R++ I+GP D
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT--DAIF 69
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + + I ++ ++ + V RL+V ++Q G L+GKGGS I E+R+ +GA
Sbjct: 70 KAFAMIAYKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDA-FPSINRPLNP 492
+++ G D +P + E V I+G +A+ + + QI + + A P +P +
Sbjct: 130 QVQVAG-DMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPAST 185
Query: 493 TFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIH 552
+ F G + + G Y+ PH D +H +
Sbjct: 186 PVI--------FAGGQAYTIQGQYA---------------------IPHPDQLTKLHQLA 216
Query: 553 RPGMP--------PHMPDMK-----PWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSL 599
P P P K Q LM G G PP + +P L
Sbjct: 217 MQQTPFTPLGQTTPAFPGEKLPLHSSEEAQNLM--GQSSGLD--ASPPASTHELTIPNDL 272
Query: 600 VPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
+ I G G + +IRQ+S A+I I + G++E I I+GTP AQ LI A + SE
Sbjct: 273 IGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARLTSE 332
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 106/233 (45%), Gaps = 47/233 (20%)
Query: 181 NTKSSK--FVLRLLVLSTQVGCLLGKGGCVIKQI------------DKLPTCALASDEVV 226
+T +SK LRL+V ++Q G L+GKGG IK+I D LP +++ V
Sbjct: 90 STATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN---STERAV 146
Query: 227 QITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPL---PDHSVSSQGAPYATG 283
I+G D + + +K I +L++ P+ +IP P S P+ + + QG YA
Sbjct: 147 TISGTPDAIIQCVKQICVVMLESPPKG-ATIPYRPKPASTPVIFAGGQAYTIQGQ-YAIP 204
Query: 284 HRD-VADIH---------LPMPPSIPKF-------HES-------GVLDRPKPSPEILTF 319
H D + +H P+ + P F H S G SP T
Sbjct: 205 HPDQLTKLHQLAMQQTPFTPLGQTTPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTH 264
Query: 320 RLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG-PAH 371
L ++ +G +IG+ G I ++Q +G IK+ A G+ +R I I+G PA+
Sbjct: 265 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPAN 317
>gi|326505208|dbj|BAK02991.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 513
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 149/356 (41%), Gaps = 23/356 (6%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISA 378
FR+L ++VG +IG+ G I+ + +++ IK+++ G +R ++IS PD+ IS
Sbjct: 116 FRILVPAQKVGAIIGRKGEFIKKMCEQSKARIKILDGPPGVTERAVIISAKDEPDEPISP 175
Query: 379 PQDAVLRVQTRIARAI------PDNREQTVM-TRLLVASNQIGCLLGKGGSIIAEMRKLS 431
D +LR+ RI P V TRLLV ++Q G L+GK G+ I ++ S
Sbjct: 176 AMDGLLRIHKRITDGSDGEFGQPQRGASNVGPTRLLVPASQAGSLIGKQGATIKSIQDSS 235
Query: 432 GAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFF-RDAFPSINRPL 490
+ +RI+ + +P A ++ VV I GE V +A+ I LR P + +
Sbjct: 236 KSVVRIV--ENVPPVALNDDRVVEIQGEPLGVHKAVELIANHLRKFLVDHSVLPLFEQQM 293
Query: 491 NPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHH 550
+ + P + +P + GG P P D++
Sbjct: 294 KMHSVQREQP---MTAPQHWTPTQPWLPPPNLPPVGPGYGGNPQFMPPRPQDNYYP---- 346
Query: 551 IHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPV---VVPRSLVPIIQGED 607
RP +PP M +G P G P H V +P S + G
Sbjct: 347 --RPDVPP-MEKQPHYGISAYGREAPPSGTSGNQPPLHVASQVHNMQIPLSYADAVIGAA 403
Query: 608 GACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSETETT 663
GA + IR+ S A +TI + + E + I G+ Q AQ LIQ F+ T
Sbjct: 404 GASISYIRRQSGAAVTIQESRGAPGEMTVEIIGSASQVQTAQQLIQNFMAEAAPQT 459
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 98/237 (41%), Gaps = 60/237 (25%)
Query: 21 NGKEKSQKLAGDYSENQPSKSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIR 80
NG+ K Q+ E++ +PG +FR+L P K+ +IG+ GE + ++ + + I+
Sbjct: 89 NGQVKQQESLQVEGEDKRWPGWPGDSVFRILVPAQKVGAIIGRKGEFIKKMCEQSKARIK 148
Query: 81 VEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASVADESDNKKEDSVNEG 140
+ + G ER V+I A D E
Sbjct: 149 ILDGPPGVTERAVIISAKDEPDEPI----------------------------------- 173
Query: 141 SVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGC 200
S MDG LL + +R+ + + E + S+ RLLV ++Q G
Sbjct: 174 SPAMDG-------------LLRIHKRITDGS-DGEFGQPQRGASNVGPTRLLVPASQAGS 219
Query: 201 LLGKGGCVIKQI-----------DKLPTCALASDEVVQITGEVDTVRKALKLISHQL 246
L+GK G IK I + +P AL D VV+I GE V KA++LI++ L
Sbjct: 220 LIGKQGATIKSIQDSSKSVVRIVENVPPVALNDDRVVEIQGEPLGVHKAVELIANHL 276
>gi|326922311|ref|XP_003207393.1| PREDICTED: poly(rC)-binding protein 3-like [Meleagris gallopavo]
Length = 313
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 157/347 (45%), Gaps = 58/347 (16%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R++ I+GP D
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT--DAIF 69
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + + I ++ ++ + V RL+V ++Q G L+GKGGS I E+R+ +GA
Sbjct: 70 KAFAMIAYKFEEDITNSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPT 493
+++ G D +P + E V I+G +A+ + + QI + + +I P + T
Sbjct: 130 QVQVAG-DMLP---NSTERAVTISGTPDAIIQCVKQICVVMLEAYTIQGQYAIPHP-DLT 184
Query: 494 FLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHP-HDDHSAFMHHIH 552
L Q++ + + +P G + P+F PG P H A
Sbjct: 185 KLHQLA-----MQQTPFTPLGQTT---PAF-----------PGEKLPLHSSEEA------ 219
Query: 553 RPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLK 612
Q LM G G PP + +P L+ I G G +
Sbjct: 220 ----------------QNLM--GQSSGLD--ASPPASTHELTIPNDLIGCIIGRQGTKIN 259
Query: 613 QIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
+IRQ+S A+I I + G++E I I+GTP AQ LI A + SE
Sbjct: 260 EIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARLTSE 306
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 31/212 (14%)
Query: 181 NTKSSK--FVLRLLVLSTQVGCLLGKGGCVIKQI------------DKLPTCALASDEVV 226
+T +SK LRL+V ++Q G L+GKGG IK+I D LP +++ V
Sbjct: 90 STATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN---STERAV 146
Query: 227 QITGEVDTVRKALKLISHQLLD-NSPRDHESIPGNPTGPSHP--LPDHSVSSQGAPYATG 283
I+G D + + +K I +L+ + + +IP HP H ++ Q P+
Sbjct: 147 TISGTPDAIIQCVKQICVVMLEAYTIQGQYAIP-------HPDLTKLHQLAMQQTPFTPL 199
Query: 284 HRDVADI---HLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIR 340
+ LP+ S + G SP T L ++ +G +IG+ G I
Sbjct: 200 GQTTPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKIN 259
Query: 341 SLKQETGCDIKVMEAVSGTEDRLIVISG-PAH 371
++Q +G IK+ A G+ +R I I+G PA+
Sbjct: 260 EIRQMSGAQIKIANATEGSSERQITITGTPAN 291
>gi|108862919|gb|ABA99242.2| FLK, putative, expressed [Oryza sativa Japonica Group]
gi|222617409|gb|EEE53541.1| hypothetical protein OsJ_36750 [Oryza sativa Japonica Group]
Length = 517
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 106/355 (29%), Positives = 151/355 (42%), Gaps = 33/355 (9%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISA 378
FR+L ++VG VIG+ G I+ + +E+ IKV++ G DR ++IS PD +
Sbjct: 117 FRILVPAQKVGAVIGRKGEFIKKMCEESRARIKVLDGPPGVPDRAVMISAKDEPDAPLPP 176
Query: 379 PQDAVLRVQTRIARAIPDNREQ------TVM-TRLLVASNQIGCLLGKGGSIIAEMRKLS 431
D +LRV RI + +Q TV TRLLV ++Q G L+GK G+ I ++ S
Sbjct: 177 AVDGLLRVHKRITDGLDGESDQPQRAAGTVGPTRLLVPASQAGSLIGKQGATIKSIQDAS 236
Query: 432 GAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFF-RDAFPSINRPL 490
+RIL + +P A ++ VV I GE V +A+ I + LR R P +
Sbjct: 237 KCVLRIL--ESVPPVALSDDRVVEIQGEPLDVHKAVELIASHLRKFLVDRSVLPLFEMQM 294
Query: 491 NPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGG--PPPPGSFHPHDDHSAFM 548
+ P P P G SN P + PP P DH
Sbjct: 295 KVHNAHREQPMPPPQTWGPPPPWGHPSNVPPGGPGYGGNPQFMPPRP------QDHYYPP 348
Query: 549 HHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVG---PPHRRVPVV----VPRSLVP 601
+ PH +G P G P G PPH + VP S
Sbjct: 349 PDVPPVEKQPH------YGISSYGRDAPPTGAPPASGNQHPPHGSSQITHSMQVPLSYAD 402
Query: 602 IIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFV 656
+ G GA + IR+ S A I+I + PG E + ISG+ Q AQ LI+ F+
Sbjct: 403 AVIGAAGASISYIRRHSGATISIQEGVPG--EMTVEISGSASQVQTAQQLIKNFM 455
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 102/241 (42%), Gaps = 70/241 (29%)
Query: 22 GKEKSQKLAGDYSENQPSKSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRV 81
G+ + ++ A ++ + +PG +FR+L P K+ VIG+ GE + ++ +++ I+V
Sbjct: 91 GEAQGEQQANAVTDEKKWPGWPGESVFRILVPAQKVGAVIGRKGEFIKKMCEESRARIKV 150
Query: 82 EETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGS 141
+ G +R V+I S DE D +V+
Sbjct: 151 LDGPPGVPDRAVMI----------------------------SAKDEPDAPLPPAVD--- 179
Query: 142 VLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSKFV-----LRLLVLST 196
LL V +R+ T+ D E+ + + RLLV ++
Sbjct: 180 -----------------GLLRVHKRI------TDGLDGESDQPQRAAGTVGPTRLLVPAS 216
Query: 197 QVGCLLGKGG-----------CVIKQIDKLPTCALASDEVVQITGEVDTVRKALKLISHQ 245
Q G L+GK G CV++ ++ +P AL+ D VV+I GE V KA++LI+
Sbjct: 217 QAGSLIGKQGATIKSIQDASKCVLRILESVPPVALSDDRVVEIQGEPLDVHKAVELIASH 276
Query: 246 L 246
L
Sbjct: 277 L 277
>gi|351697348|gb|EHB00267.1| Poly(rC)-binding protein 3 [Heterocephalus glaber]
Length = 427
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 106/375 (28%), Positives = 164/375 (43%), Gaps = 75/375 (20%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R++ I+GP
Sbjct: 89 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT------ 140
Query: 377 SAPQDAVLRVQTRIARAI-----------PDNREQTVMTRLLVASNQIGCLLGKGGSIIA 425
DA+ + IA P + V RL+V ++Q G L+GKGGS I
Sbjct: 141 ----DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 196
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDA-FP 484
E+R+ +GA +++ G D +P + E V I+G +A+ + + QI + + A P
Sbjct: 197 EIRESTGAQVQVAG-DMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIP 252
Query: 485 SINRPLNPTFLDQVSPFPSFIGRRELSPPGMYS----------NFGPS-------FHKFD 527
+P + + F G + + G Y+ + PS H+
Sbjct: 253 YRPKPASTPVI--------FAGGQAYTIQGQYAIPHPDPLAHGLYQPSAILQLTKLHQLA 304
Query: 528 AVGGP-PPPGSFHPHDDHSAFMHHIHRPG--MPPHMPDMKPWGPQGLMEVGGPMGFPDFV 584
P PP G +P AF PG +P H + Q LM G G
Sbjct: 305 MQQTPFPPLGQTNP-----AF------PGEKLPLHSSEEA----QNLM--GQSPGLD--A 345
Query: 585 GPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQ 644
PP + +P L+ I G G + +IRQ+S A+I I + G++E I I+GTP
Sbjct: 346 SPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPAN 405
Query: 645 THAAQSLIQAFVMSE 659
AQ LI A + SE
Sbjct: 406 ISLAQYLINARLTSE 420
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 97/232 (41%), Gaps = 57/232 (24%)
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQI------------DKLPTCALASDEVVQITGEVDTVR 236
LRL+V ++Q G L+GKGG IK+I D LP +++ V I+G D +
Sbjct: 175 LRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN---STERAVTISGTPDAII 231
Query: 237 KALKLISHQLLDNSPRDHESIPGNPTGPSHPL---PDHSVSSQGAPYATGHRDVADIHLP 293
+ +K I +L++ P+ +IP P S P+ + + QG YA H D L
Sbjct: 232 QCVKQICVVMLESPPKG-ATIPYRPKPASTPVIFAGGQAYTIQGQ-YAIPHPDPLAHGLY 289
Query: 294 MPPSI---PKFHESGVLDRPKP----------------------------------SPEI 316
P +I K H+ + P P SP
Sbjct: 290 QPSAILQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSPGLDASPPA 349
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
T L ++ +G +IG+ G I ++Q +G IK+ A G+ +R I I+G
Sbjct: 350 STHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITG 401
>gi|395536909|ref|XP_003770451.1| PREDICTED: poly(rC)-binding protein 3 isoform 2 [Sarcophilus
harrisii]
Length = 361
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 105/373 (28%), Positives = 164/373 (43%), Gaps = 62/373 (16%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R++ I+GP D
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT--DAIF 69
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + + I ++ ++ + V RL+V ++Q G L+GKGGS I E+R+ +GA
Sbjct: 70 KAFAMIAYKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHH---------------- 477
+++ G D +P + E V I+G +A+ + + QI +
Sbjct: 130 QVQVAG-DMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPAST 185
Query: 478 --FFRD----AFPSINRPLNPTFLDQVSPFPSFI--GRRELSPPGMYSNFGPSFHKFDAV 529
F A P N + L Q P P++ G+ + P + H+
Sbjct: 186 PVIFAGGQVRADPLAASTANLSLLLQHQPLPAYTIQGQYAIPHPDLT-----KLHQLAMQ 240
Query: 530 GGP-PPPGSFHPHDDHSAFMHHIHRPG--MPPHMPDMKPWGPQGLMEVGGPMGFPDFVGP 586
P PP G P AF PG +P H + Q LM G G P
Sbjct: 241 QTPFPPLGQTTP-----AF------PGEKLPLHSSEEA----QNLM--GQSPGLD--ASP 281
Query: 587 PHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTH 646
P + +P L+ I G G + +IRQ+S A+I I + G++E I I+GTP
Sbjct: 282 PASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANIS 341
Query: 647 AAQSLIQAFVMSE 659
AQ LI A + SE
Sbjct: 342 LAQYLINARLTSE 354
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 106/253 (41%), Gaps = 72/253 (28%)
Query: 181 NTKSSK--FVLRLLVLSTQVGCLLGKGGCVIKQI------------DKLPTCALASDEVV 226
+T +SK LRL+V ++Q G L+GKGG IK+I D LP +++ V
Sbjct: 90 STATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN---STERAV 146
Query: 227 QITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPS--------------------- 265
I+G D + + +K I +L++ P+ +IP P S
Sbjct: 147 TISGTPDAIIQCVKQICVVMLESPPKG-ATIPYRPKPASTPVIFAGGQVRADPLAASTAN 205
Query: 266 -------HPLPDHSVSSQGAPYATGHRDVADIH------LPMPP---SIPKF-------- 301
PLP +++ Q YA H D+ +H P PP + P F
Sbjct: 206 LSLLLQHQPLPAYTIQGQ---YAIPHPDLTKLHQLAMQQTPFPPLGQTTPAFPGEKLPLH 262
Query: 302 --HESGVLDRPKP----SPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA 355
E+ L P SP T L ++ +G +IG+ G I ++Q +G IK+ A
Sbjct: 263 SSEEAQNLMGQSPGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANA 322
Query: 356 VSGTEDRLIVISG 368
G+ +R I I+G
Sbjct: 323 TEGSSERQITITG 335
>gi|291237680|ref|XP_002738761.1| PREDICTED: poly(rC) binding protein 2-like [Saccoglossus
kowalevskii]
Length = 409
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 152/353 (43%), Gaps = 65/353 (18%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RL+ + VG +IGKGG I+ ++++G I + + S +R++ ++G
Sbjct: 19 LTIRLIMQGKEVGSIIGKGGETIKKFREQSGARINISD--SSCAERIVTVTGSTE----- 71
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT------VMTRLLVASNQIGCLLGKGGSIIAEMRKL 430
A +A + + + +N + V RL+V ++Q G L+GKGGS I E+R+
Sbjct: 72 -AINNAFEMITKKFEEDVSNNMANSSTPKPPVTLRLVVPASQCGSLIGKGGSKIKEIREN 130
Query: 431 SGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPL 490
+GA +++ G D + + E V I+G EA+ + ++QI + + A P
Sbjct: 131 TGASVQVAG-DMLHQ---STERAVTISGTPEAITKCVYQICCVMLESPPKGA----TIPY 182
Query: 491 NPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHH 550
P + + P++ + G Y+ P F K H M H
Sbjct: 183 RPKPTNATATHPAY------AVHGNYAVPYPDFMKL-----------------HHLTMQH 219
Query: 551 IHRPGMPPHMPDMKPWGPQGLMEVGGPMGF---------PDFVGPPHRRVPVVVPRSLVP 601
P +P P+ P L MG+ + +++P L+
Sbjct: 220 T------PFLPGQTPFTPTAL-----NMGYGVANAASAGTQVATTGQQTYEIMIPNDLIG 268
Query: 602 IIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQA 654
+ G GA + +IRQIS A I I + + G+ + + ISGT E + A LI +
Sbjct: 269 CVIGRGGAKINEIRQISGATIKIANSQEGSNDRSVTISGTVEAINLAHFLINS 321
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 107/233 (45%), Gaps = 30/233 (12%)
Query: 164 FERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIKQIDKLPTCAL- 220
FE + + E + N+ + K LRL+V ++Q G L+GKGG IK+I + ++
Sbjct: 77 FEMITKKFEEDVSNNMANSSTPKPPVTLRLVVPASQCGSLIGKGGSKIKEIRENTGASVQ 136
Query: 221 --------ASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHS 272
+++ V I+G + + K + I +L++ P+ +IP P P++ H
Sbjct: 137 VAGDMLHQSTERAVTISGTPEAITKCVYQICCVMLESPPKG-ATIPYRPK-PTNATATHP 194
Query: 273 VSSQGAPYATGHRDVADIH------LPMPPSIPKFHES------GVLDRPKPSPEILT-- 318
+ YA + D +H P P F + GV + ++ T
Sbjct: 195 AYAVHGNYAVPYPDFMKLHHLTMQHTPFLPGQTPFTPTALNMGYGVANAASAGTQVATTG 254
Query: 319 ---FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
+ ++ ++ +G VIG+GGA I ++Q +G IK+ + G+ DR + ISG
Sbjct: 255 QQTYEIMIPNDLIGCVIGRGGAKINEIRQISGATIKIANSQEGSNDRSVTISG 307
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Query: 406 LLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQE 465
+++ ++ IGC++G+GG+ I E+R++SGA I+I + N+ V I+G EA+
Sbjct: 260 IMIPNDLIGCVIGRGGAKINEIRQISGATIKIANSQE-----GSNDRSVTISGTVEAINL 314
Query: 466 ALFQITTRL 474
A F I + L
Sbjct: 315 AHFLINSSL 323
>gi|326488325|dbj|BAJ93831.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 520
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 151/358 (42%), Gaps = 40/358 (11%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISA 378
FR+L ++VG +IG+ G I+ + E+ IK+++ G +R ++IS PD +
Sbjct: 122 FRVLVSTQKVGALIGRKGEFIKRMCDESKARIKILDGPPGVPERAVMISAKDEPDALVPP 181
Query: 379 PQDAVLRVQTRIARAIPDNREQTVM-------TRLLVASNQIGCLLGKGGSIIAEMRKLS 431
D +LRV RI + +Q TRLLV ++Q G L+GK G+ I ++ S
Sbjct: 182 AIDVLLRVHNRITDGLDSETDQAQKGASPAGPTRLLVPASQAGSLIGKQGTTIKSIQDAS 241
Query: 432 GAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFF-RDAFPSINRPL 490
+RIL + +P A ++ VV I GE V +A+ I LR R P +
Sbjct: 242 KCALRIL--ENVPPVALNDDRVVEIQGEPHDVHKAVELIANHLRKFLVDRSVLPLFEMQM 299
Query: 491 NPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPP------PPGSFHPHDDH 544
+ P P+ P N PS + GG P P S++P +
Sbjct: 300 KVHSAPREQPMPAPQQWGPPPPWSHPPNIPPSGPGY---GGNPHFMPPRPQDSYYPPPN- 355
Query: 545 SAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFV------GPPHRRVPVVVPRS 598
+HH+ + PH +G P P G + VP S
Sbjct: 356 ---VHHVEK---QPH------YGISSYGRDANPTAAPTSGNQHLSHGSSQLSQKMQVPLS 403
Query: 599 LVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFV 656
+ G GA + IR+ S A I+I + PG E + I+G+ Q AQ LI+ F+
Sbjct: 404 YADAVIGSAGANISYIRKHSGATISIQEGVPG--EMTVEIAGSASQVQTAQQLIKNFM 459
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 96/236 (40%), Gaps = 60/236 (25%)
Query: 22 GKEKSQKLAGDYSENQPSKSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRV 81
G+ ++ +LA +E+ +PG +FRVL K+ +IG+ GE + ++ ++ I++
Sbjct: 96 GEAEADQLANVVAEDTKWPGWPGESVFRVLVSTQKVGALIGRKGEFIKRMCDESKARIKI 155
Query: 82 EETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGS 141
+ G ER V+I A D + R N
Sbjct: 156 LDGPPGVPERAVMISAKDEPDALVPPAIDVLLRVHNR----------------------- 192
Query: 142 VLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCL 201
+ DGL+SE T + QK S RLLV ++Q G L
Sbjct: 193 -ITDGLDSE--TDQAQKGA-----------------------SPAGPTRLLVPASQAGSL 226
Query: 202 LGKGGCVIKQI-----------DKLPTCALASDEVVQITGEVDTVRKALKLISHQL 246
+GK G IK I + +P AL D VV+I GE V KA++LI++ L
Sbjct: 227 IGKQGTTIKSIQDASKCALRILENVPPVALNDDRVVEIQGEPHDVHKAVELIANHL 282
>gi|326917277|ref|XP_003204927.1| PREDICTED: poly(rC)-binding protein 3-like [Meleagris gallopavo]
Length = 448
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 98/364 (26%), Positives = 155/364 (42%), Gaps = 74/364 (20%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R++ I+GP D
Sbjct: 17 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--SCPERIVTITGPT--DAIF 72
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A L+ + I ++ ++ + V RL+V ++Q G L+GKGGS I E+R+ +GA
Sbjct: 73 KAFSMIALKFEEDINASMTNSSVTSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGA 132
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDA-FPSINRPL-- 490
+++ G D +P + E V I+G +A+ + + QI + + A P +P
Sbjct: 133 QVQVAG-DMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASA 188
Query: 491 -------------------NPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGG 531
N T L Q P P+F + G Y+ P K
Sbjct: 189 PIIFAGGQVRADTILASAGNHTVLAQPQPAPAFTIQ------GQYAIPHPDLTKL----- 237
Query: 532 PPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDF-VGPPHRR 590
H M H PP P + P GFP P
Sbjct: 238 ------------HQLAMQH------PPFTP-LGQTTP----------GFPGLDATSPTSS 268
Query: 591 VPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQS 650
+ +P L+ I G G+ + +IRQ+S A+I I + G+ E + I+G+P AQ
Sbjct: 269 HELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANATEGSAERQVTITGSPANISLAQY 328
Query: 651 LIQA 654
LI A
Sbjct: 329 LINA 332
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 103/223 (46%), Gaps = 50/223 (22%)
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQI------------DKLPTCALASDEVVQITGEVDTVR 236
LRL+V ++Q G L+GKGG IK+I D LP +++ V I+G D +
Sbjct: 103 LRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN---STERAVTISGTPDAII 159
Query: 237 KALKLISHQLLDNSPRDHESIPGNPTGPSHPL----------------PDHSVSSQGAP- 279
+ +K I +L++ P+ +IP P S P+ +H+V +Q P
Sbjct: 160 QCVKQICVVMLESPPKG-ATIPYRPKPASAPIIFAGGQVRADTILASAGNHTVLAQPQPA 218
Query: 280 --------YATGHRDVADIH-LPM--PPSIPKFHES-GV--LDRPKPSPEILTFRLLCHD 325
YA H D+ +H L M PP P + G LD P+ + L +
Sbjct: 219 PAFTIQGQYAIPHPDLTKLHQLAMQHPPFTPLGQTTPGFPGLDATSPTS---SHELTIPN 275
Query: 326 ERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
+ +G +IG+ G+ I ++Q +G IK+ A G+ +R + I+G
Sbjct: 276 DLIGCIIGRQGSKINEIRQMSGAQIKIANATEGSAERQVTITG 318
>gi|118086587|ref|XP_419049.2| PREDICTED: poly(rC)-binding protein 3 [Gallus gallus]
Length = 448
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 98/364 (26%), Positives = 155/364 (42%), Gaps = 74/364 (20%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R++ I+GP D
Sbjct: 17 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--SCPERIVTITGPT--DAIF 72
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A L+ + I ++ ++ + V RL+V ++Q G L+GKGGS I E+R+ +GA
Sbjct: 73 KAFSMIALKFEEDINASMTNSTVTSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGA 132
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDA-FPSINRPL-- 490
+++ G D +P + E V I+G +A+ + + QI + + A P +P
Sbjct: 133 QVQVAG-DMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASA 188
Query: 491 -------------------NPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGG 531
N T L Q P P+F + G Y+ P K
Sbjct: 189 PIIFAGGQVRADTILASAGNHTVLAQPQPAPAFTIQ------GQYAIPHPDLTKL----- 237
Query: 532 PPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDF-VGPPHRR 590
H M H PP P + P GFP P
Sbjct: 238 ------------HQLAMQH------PPFTP-LGQTTP----------GFPGLDATSPTSS 268
Query: 591 VPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQS 650
+ +P L+ I G G+ + +IRQ+S A+I I + G+ E + I+G+P AQ
Sbjct: 269 HELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANATEGSAERQVTITGSPANISLAQY 328
Query: 651 LIQA 654
LI A
Sbjct: 329 LINA 332
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 117/256 (45%), Gaps = 53/256 (20%)
Query: 159 ALLLVFERM-VEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIKQI--- 212
A+ F + ++ E + + +T +SK LRL+V ++Q G L+GKGG IK+I
Sbjct: 70 AIFKAFSMIALKFEEDINASMTNSTVTSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRES 129
Query: 213 ---------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTG 263
D LP +++ V I+G D + + +K I +L++ P+ +IP P
Sbjct: 130 TGAQVQVAGDMLPN---STERAVTISGTPDAIIQCVKQICVVMLESPPKG-ATIPYRPKP 185
Query: 264 PSHPL----------------PDHSVSSQGAP---------YATGHRDVADIH-LPM--P 295
S P+ +H+V +Q P YA H D+ +H L M P
Sbjct: 186 ASAPIIFAGGQVRADTILASAGNHTVLAQPQPAPAFTIQGQYAIPHPDLTKLHQLAMQHP 245
Query: 296 PSIPKFHES-GV--LDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV 352
P P + G LD P+ + L ++ +G +IG+ G+ I ++Q +G IK+
Sbjct: 246 PFTPLGQTTPGFPGLDATSPTS---SHELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKI 302
Query: 353 MEAVSGTEDRLIVISG 368
A G+ +R + I+G
Sbjct: 303 ANATEGSAERQVTITG 318
>gi|193848519|gb|ACF22709.1| hypothetical protein-2 [Brachypodium distachyon]
Length = 429
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 83/245 (33%), Positives = 119/245 (48%), Gaps = 29/245 (11%)
Query: 224 EVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATG 283
EV++ITG+ T+RKA+ +S L + S+ + T PS P S Y
Sbjct: 190 EVIEITGDRTTIRKAIVALSSYLQGD--LHACSLTTSVTTPSPMFPWKSSEVPEPNYGDL 247
Query: 284 HRDV----ADIHLPM---PPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGG 336
H V A+I++P P + E+ L + ++FRLLCH GG+IGK G
Sbjct: 248 HSGVSTKCANINVPWIDCPQDVAGNVETENLQQ-------ISFRLLCHVNLAGGLIGKKG 300
Query: 337 AIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPD 396
II+ + ETG I V SG +R+I IS P S Q A+L + R+ +
Sbjct: 301 MIIKGFETETGASIDVGNPFSGCMERVITISALESPGKH-SKVQSAILCIFDRM-----E 354
Query: 397 NREQTVM-------TRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASE 449
E+ +M R+LV +Q L+G GG+II EM K +GA I IL + +P CAS
Sbjct: 355 EVERNLMFGKPECSARVLVPKSQFSSLVGLGGAIIKEMVKSTGARIEILDEMDVPACASN 414
Query: 450 NEEVV 454
E V+
Sbjct: 415 CERVL 419
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 75/195 (38%), Gaps = 68/195 (34%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
I FR+LC V+ G+IGK G ++ +TG +I V SG ER++ I A
Sbjct: 281 ISFRLLCHVNLAGGLIGKKGMIIKGFETETGASIDVGNPFSGCMERVITISA-------- 332
Query: 106 ENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFE 165
L S + SKVQ A+L +F+
Sbjct: 333 -----------------------------------------LESPGKHSKVQSAILCIFD 351
Query: 166 RMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDK----------- 214
RM EVE E + R+LV +Q L+G GG +IK++ K
Sbjct: 352 RMEEVERNLMFGKPECSA------RVLVPKSQFSSLVGLGGAIIKEMVKSTGARIEILDE 405
Query: 215 --LPTCALASDEVVQ 227
+P CA + V+Q
Sbjct: 406 MDVPACASNCERVLQ 420
>gi|357449597|ref|XP_003595075.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355484123|gb|AES65326.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 470
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 156/359 (43%), Gaps = 38/359 (10%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISA 378
FRL+ +VGG+IG+ G +I+ L ET ++V++A G DR+I+ISG + IS
Sbjct: 72 FRLIVPVGKVGGIIGRKGDLIKKLCDETKARVRVLDADLGIPDRIILISGKEELEAAISP 131
Query: 379 PQDAVLRVQTRIARAIPDNREQT-------VMTRLLVASNQIGCLLGKGGSIIAEMRKLS 431
DAV+R+ R++ + E RLLVAS Q L+GK G+II +++ S
Sbjct: 132 AMDAVIRIFKRVSGLSETDSENKGPAGVTLCSIRLLVASTQAISLIGKQGTIIRSIQESS 191
Query: 432 GAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFF-RDAFPSINRPL 490
GA +R+L D++ A+ E +V + GE V +AL + LR P +
Sbjct: 192 GASVRVLSGDEVQYFATAEERIVDLQGEALMVLKALEAVIGHLRKFLVDHSILPVYEKTY 251
Query: 491 NPTFLDQVSPFPSFIGRREL---SPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAF 547
N + Q ++ + L S M+S+ P K D+V F + H
Sbjct: 252 NASLPQQDRQAETWSDKPLLHTTSQTSMFSDI-PFPTKRDSV--------FADRESHLDS 302
Query: 548 MHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGED 607
+ + + L VG P+ V V+ +P+ ED
Sbjct: 303 LLSSSTMSLYGQDSSLSGVRSSSLSRVGAPI------------VTTVIQTMQIPLSYAED 350
Query: 608 -----GACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSETE 661
G + IR+ S A +T+ + + E V+ I GT Q AQ LIQ + S E
Sbjct: 351 IIGIQGTNIDYIRRTSGAILTVQESRV-PDEIVVEIKGTTSQVQTAQQLIQEVISSHRE 408
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 99/231 (42%), Gaps = 65/231 (28%)
Query: 42 FPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNK 101
+PG +FR++ PV K+ G+IG+ G+++ ++ +T +RV + G +R+++I
Sbjct: 66 WPGDCVFRLIVPVGKVGGIIGRKGDLIKKLCDETKARVRVLDADLGIPDRIILISG---- 121
Query: 102 KETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALL 161
E LEA+I S A++
Sbjct: 122 ---KEELEAAI-----------------------------------------SPAMDAVI 137
Query: 162 LVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI--------- 212
+F+R+ + ET+ ++ + +RLLV STQ L+GK G +I+ I
Sbjct: 138 RIFKRVSGLS-ETDSENKGPAGVTLCSIRLLVASTQAISLIGKQGTIIRSIQESSGASVR 196
Query: 213 ----DKLPTCALASDEVVQITGEVDTVRKALK-LISHQLLDNSPRDHESIP 258
D++ A A + +V + GE V KAL+ +I H L DH +P
Sbjct: 197 VLSGDEVQYFATAEERIVDLQGEALMVLKALEAVIGH--LRKFLVDHSILP 245
>gi|449493846|ref|XP_002188887.2| PREDICTED: poly(rC)-binding protein 3-like [Taeniopygia guttata]
Length = 352
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 101/372 (27%), Positives = 159/372 (42%), Gaps = 77/372 (20%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R++ I+GP D
Sbjct: 17 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGTC--PERIVTITGPT--DAIF 72
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A L+ + I ++ ++ + V RL+V ++Q G L+GKGGS I E+R+ +GA
Sbjct: 73 KAFSMIALKFEEDINASMTNSSVTSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGA 132
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDA-FPSINRPL-- 490
+++ G D +P + E V I+G +A+ + + QI + + A P +P
Sbjct: 133 QVQVAG-DMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASA 188
Query: 491 -------------------NPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGG 531
N T L Q P P+F + G Y+ P K
Sbjct: 189 PIIFAGGQVRADTILASAGNHTVLAQPQPAPAFTIQ------GQYAIPHPDLTKL----- 237
Query: 532 PPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDF-VGPPHRR 590
H M H PP P + P GFP P
Sbjct: 238 ------------HQLAMQH------PPFTP-LGQTTP----------GFPGLDATTPTSS 268
Query: 591 VPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQS 650
+ +P L+ I G G+ + +IRQ+S A+I I + G+ E + I+G+P AQ
Sbjct: 269 HELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANATEGSAERQVTITGSPANISLAQY 328
Query: 651 LIQA---FVMSE 659
LI A F+ SE
Sbjct: 329 LINASIYFLKSE 340
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 115/259 (44%), Gaps = 51/259 (19%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI 212
T + KA ++ + E + + + T LRL+V ++Q G L+GKGG IK+I
Sbjct: 68 TDAIFKAFSMIALKFEE-DINASMTNSSVTSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 126
Query: 213 ------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGN 260
D LP +++ V I+G D + + +K I +L++ P+ +IP
Sbjct: 127 RESTGAQVQVAGDMLPN---STERAVTISGTPDAIIQCVKQICVVMLESPPKG-ATIPYR 182
Query: 261 PTGPSHPL----------------PDHSVSSQGAP---------YATGHRDVADIH-LPM 294
P S P+ +H+V +Q P YA H D+ +H L M
Sbjct: 183 PKPASAPIIFAGGQVRADTILASAGNHTVLAQPQPAPAFTIQGQYAIPHPDLTKLHQLAM 242
Query: 295 --PPSIPKFHES-GV--LDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCD 349
PP P + G LD P+ + L ++ +G +IG+ G+ I ++Q +G
Sbjct: 243 QHPPFTPLGQTTPGFPGLDATTPTS---SHELTIPNDLIGCIIGRQGSKINEIRQMSGAQ 299
Query: 350 IKVMEAVSGTEDRLIVISG 368
IK+ A G+ +R + I+G
Sbjct: 300 IKIANATEGSAERQVTITG 318
>gi|392884376|gb|AFM91020.1| poly(rC) binding protein 3, isoform CRAb [Callorhinchus milii]
Length = 349
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 157/366 (42%), Gaps = 60/366 (16%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ ++ E+G I + E +R++ I+GP D
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMRVESGARINISEG--NCPERIVTITGPT--DAIF 69
Query: 377 SAPQDAVLRVQTRIARAI---PDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + + I ++ P + V RL+V ++Q G L+GKGGS I E+R+ +GA
Sbjct: 70 KAFAMIAFKFEEDINNSMTNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDA-FPSINRPLNP 492
+++ G D +P + E V I+G +A+ + + QI + + A P +P +
Sbjct: 130 QVQVAG-DMLP---NSTERAVTISGMPDAIIQCVKQICVVMLESPPKGATIPYRPKPASA 185
Query: 493 TFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIH 552
+ F G + + G Y+ PH D + + +
Sbjct: 186 PVI--------FAGGQAYTIQGQYA---------------------IPHPDDACLLSAEY 216
Query: 553 RPGM------------PPHMPDMKPWGPQGL---MEVGGPMGFPDFVG----PPHRRVPV 593
+ + P W P+ L ME+ + G P +
Sbjct: 217 KTALTSTLWRSPQLAHPSSQLKEAAWRPESLRGKMELKNCNEESENWGMDANPQASTHEL 276
Query: 594 VVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQ 653
+P L+ I G G + +IRQ+S A+I I + G+TE I I+G+P AQ LI
Sbjct: 277 TIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSTERQITITGSPANISLAQYLIN 336
Query: 654 AFVMSE 659
A + SE
Sbjct: 337 ARLTSE 342
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 100/235 (42%), Gaps = 55/235 (23%)
Query: 187 FVLRLLVLSTQVGCLLGKGGCVIKQI------------DKLPTCALASDEVVQITGEVDT 234
LRL+V ++Q G L+GKGG IK+I D LP +++ V I+G D
Sbjct: 98 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN---STERAVTISGMPDA 154
Query: 235 VRKALKLISHQLLDNSPRDHESIPGNPTGPSHPL---PDHSVSSQGAPYATGHRD----- 286
+ + +K I +L++ P+ +IP P S P+ + + QG YA H D
Sbjct: 155 IIQCVKQICVVMLESPPKG-ATIPYRPKPASAPVIFAGGQAYTIQGQ-YAIPHPDDACLL 212
Query: 287 VADIHLPMPPSIPK----FHESGVLDRPKPSPEIL------------------------- 317
A+ + ++ + H S L PE L
Sbjct: 213 SAEYKTALTSTLWRSPQLAHPSSQLKEAAWRPESLRGKMELKNCNEESENWGMDANPQAS 272
Query: 318 TFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG-PAH 371
T L ++ +G +IG+ G I ++Q +G IK+ A G+ +R I I+G PA+
Sbjct: 273 THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSTERQITITGSPAN 327
>gi|297742912|emb|CBI35779.3| unnamed protein product [Vitis vinifera]
Length = 340
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 88/178 (49%), Gaps = 8/178 (4%)
Query: 315 EILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDD 374
I + RL+C +GGVI KGG I +++E+G IKV + D +V
Sbjct: 41 RIFSLRLVCPIRNIGGVIRKGGVFINQIRRESGAIIKVDSTSAAEADDCLVTILAKERLH 100
Query: 375 RISAPQDAVLRVQTRIARAIPDNR--EQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSG 432
PQ + R+ + D T RLLV+ NQIGC++GKGG II +R SG
Sbjct: 101 FPRGPQTSHCIFLYRMCMRLWDWNCPSGTFTVRLLVSFNQIGCVIGKGGQIIQSIRSESG 160
Query: 433 AYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLR------HHFFRDAFP 484
A IRIL D +P C+ + E++ I+ E V++ L+QI +RL H F P
Sbjct: 161 AQIRILKDDHLPSCSLSSNELIQISKEPSIVRKILYQIASRLHDNPSRSQHLFVYVVP 218
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 96/203 (47%), Gaps = 44/203 (21%)
Query: 181 NTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI-------------DKLPTCALASDEVVQ 227
N S F +RLLV Q+GC++GKGG +I+ I D LP+C+L+S+E++Q
Sbjct: 124 NCPSGTFTVRLLVSFNQIGCVIGKGGQIIQSIRSESGAQIRILKDDHLPSCSLSSNELIQ 183
Query: 228 ITGEVDTVRKALKLISHQLLDNSPRD-HESIPGNPTGPSHPLPDHSVSSQGAPYATGHRD 286
I+ E VRK L I+ +L DN R H + P G S ++S GAP
Sbjct: 184 ISKEPSIVRKILYQIASRLHDNPSRSQHLFVYVVPIGYSSSGSLMGLTS-GAP------- 235
Query: 287 VADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQET 346
++D + S + + L+C +GG+IGKG II ++QE
Sbjct: 236 -------------------IMD--EASSKEFSLCLVCPIGNIGGMIGKGDVIINQIRQEF 274
Query: 347 GCDIKV-MEAVSGTEDRLIVISG 368
G IKV +V D L+ IS
Sbjct: 275 GATIKVDSTSVVEANDCLVTISA 297
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 17/114 (14%)
Query: 8 SKRPHDDDNHTE-------PNGKEKSQKLAGDYS-----ENQPSKSFPGGIMFRVLCPVS 55
+ R HD+ + ++ P G S L G S + SK F ++CP+
Sbjct: 199 ASRLHDNPSRSQHLFVYVVPIGYSSSGSLMGLTSGAPIMDEASSKEFS----LCLVCPIG 254
Query: 56 KIDGVIGKDGEMMSQISQDTGVTIRVEET-VSGSDERLVVIEASDNKKETSENL 108
I G+IGK +++QI Q+ G TI+V+ T V +++ LV I A + NL
Sbjct: 255 NIGGMIGKGDVIINQIRQEFGATIKVDSTSVVEANDCLVTISAKERLHLFKVNL 308
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 48 FRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSG-SDERLVVIEASD 99
R++CP+ I GVI K G ++QI +++G I+V+ T + +D+ LV I A +
Sbjct: 45 LRLVCPIRNIGGVIRKGGVFINQIRRESGAIIKVDSTSAAEADDCLVTILAKE 97
>gi|255554418|ref|XP_002518248.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223542595|gb|EEF44134.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 451
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 96/168 (57%), Gaps = 9/168 (5%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISA 378
FRL+ +VG +IG+ G +I+ + ET I+V++A GT DR+++ISG + +S
Sbjct: 63 FRLIVPVLKVGSIIGRKGDLIKKMCDETRARIRVLDAPIGTPDRVVLISGKEDVEAPLSP 122
Query: 379 PQDAVLRVQTRIARAIPDNREQTV--------MTRLLVASNQIGCLLGKGGSIIAEMRKL 430
DAV+RV R++ +P+ Q + RLLVAS Q L+GK GSII +++
Sbjct: 123 AMDAVIRVFKRVS-GLPEGNAQELGAAGIAFSSIRLLVASTQAINLIGKQGSIIKSIQES 181
Query: 431 SGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHF 478
+GA +R+L ++++P + +E +V + GE V EAL I LR
Sbjct: 182 TGASVRVLSENEVPFYVATDERIVDLQGEAMKVLEALEAIVGHLRKFL 229
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 93/226 (41%), Gaps = 64/226 (28%)
Query: 34 SENQPSKSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLV 93
S N P +PG +FR++ PV K+ +IG+ G+++ ++ +T IRV + G+ +R+V
Sbjct: 51 SANWPG--WPGDCVFRLIVPVLKVGSIIGRKGDLIKKMCDETRARIRVLDAPIGTPDRVV 108
Query: 94 VIEASDNKKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKET 153
+I +G+E+ E
Sbjct: 109 LI----------------------SGKEDV--------------------------EAPL 120
Query: 154 SKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI- 212
S A++ VF+R+ + PE + + +RLLV STQ L+GK G +IK I
Sbjct: 121 SPAMDAVIRVFKRVSGL-PEGNAQELGAAGIAFSSIRLLVASTQAINLIGKQGSIIKSIQ 179
Query: 213 ------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQL 246
+++P + +V + GE V +AL+ I L
Sbjct: 180 ESTGASVRVLSENEVPFYVATDERIVDLQGEAMKVLEALEAIVGHL 225
>gi|348518109|ref|XP_003446574.1| PREDICTED: poly(rC)-binding protein 3-like [Oreochromis niloticus]
Length = 349
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 96/351 (27%), Positives = 152/351 (43%), Gaps = 48/351 (13%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++++G I + E +R++ I+GP
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREDSGARINISEG--NCPERIVTITGPT------ 67
Query: 377 SAPQDAVLRVQTRIARAI-----------PDNREQTVMTRLLVASNQIGCLLGKGGSIIA 425
DA+ + IA P + V RL+V ++Q G L+GKGGS I
Sbjct: 68 ----DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 123
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDA-FP 484
EMR+ +GA +++ G D +P + E V I+G EA+ + + QI L + A P
Sbjct: 124 EMRESTGAQVQVAG-DMLP---NSTERAVTISGAPEAIIQCVKQICVVLLESPPKGATIP 179
Query: 485 SINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFH-PHDD 543
+P + +P G+ P G + + + G + PH D
Sbjct: 180 YRPKPAS-------TPVIFSGGQVRADPLGASTANLSLLLQHQPLPAYTIQGQYAIPHPD 232
Query: 544 HSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPII 603
+ +H+ M P+ P G P H + +P L+ I
Sbjct: 233 ----LSKLHQLAM-----QQTPFTPLGQTTPAFPGLDASNQASTHE---LTIPNDLIGCI 280
Query: 604 QGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQA 654
G G + +IRQ+S A+I I + G++E I I+GTP AQ LI A
Sbjct: 281 IGRQGTKINEIRQMSGAQIKIANAMEGSSERQITITGTPANISLAQYLINA 331
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 99/223 (44%), Gaps = 50/223 (22%)
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQI------------DKLPTCALASDEVVQITGEVDTVR 236
LRL+V ++Q G L+GKGG IK++ D LP +++ V I+G + +
Sbjct: 102 LRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLPN---STERAVTISGAPEAII 158
Query: 237 KALKLISHQLLDNSPRDHESIP------------------GNPTGPS----------HPL 268
+ +K I LL++ P+ +IP +P G S PL
Sbjct: 159 QCVKQICVVLLESPPKG-ATIPYRPKPASTPVIFSGGQVRADPLGASTANLSLLLQHQPL 217
Query: 269 PDHSVSSQGAPYATGHRDVADIH---LPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHD 325
P +++ Q YA H D++ +H + P P + S + T L +
Sbjct: 218 PAYTIQGQ---YAIPHPDLSKLHQLAMQQTPFTPLGQTTPAFPGLDASNQASTHELTIPN 274
Query: 326 ERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
+ +G +IG+ G I ++Q +G IK+ A+ G+ +R I I+G
Sbjct: 275 DLIGCIIGRQGTKINEIRQMSGAQIKIANAMEGSSERQITITG 317
>gi|225463940|ref|XP_002269249.1| PREDICTED: poly(rC)-binding protein 3-like [Vitis vinifera]
Length = 442
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 98/186 (52%), Gaps = 12/186 (6%)
Query: 318 TFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRIS 377
FR+L ++VG +IG+ G I+ + +ET IK+++ GT +R +++S PD +
Sbjct: 49 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKEEPDSSLP 108
Query: 378 APQDAVLRVQTRIARAIPDNREQT-----VMTRLLVASNQIGCLLGKGGSIIAEMRKLSG 432
D +L+V RI + + V TRLLVA++Q G L+GK G + +++ S
Sbjct: 109 PAMDGLLKVHKRIVDGLEGDSSHMPPGGKVSTRLLVAASQAGSLIGKQGGTVKSIQEASN 168
Query: 433 AYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNP 492
+R+LG + +P A +++ VV + GE V +A+ I + LR ++R + P
Sbjct: 169 CIVRVLGAEDLPIFALQDDRVVEVVGEPIGVHKAVELIASHLRKFL-------VDRSVIP 221
Query: 493 TFLDQV 498
F Q+
Sbjct: 222 LFEMQM 227
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 102/259 (39%), Gaps = 83/259 (32%)
Query: 42 FPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNK 101
+PG +FR+L P K+ +IG+ GE + +I ++T I++ + G+ ER V++ A K
Sbjct: 44 WPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSA---K 100
Query: 102 KETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALL 161
+E +L + MDGL L
Sbjct: 101 EEPDSSLPPA--------------------------------MDGL-------------L 115
Query: 162 LVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI--------- 212
V +R+V+ E K RLLV ++Q G L+GK G +K I
Sbjct: 116 KVHKRIVD---GLEGDSSHMPPGGKVSTRLLVAASQAGSLIGKQGGTVKSIQEASNCIVR 172
Query: 213 ----DKLPTCALASDEVVQITGEVDTVRKALKLISHQL------------------LDNS 250
+ LP AL D VV++ GE V KA++LI+ L + N
Sbjct: 173 VLGAEDLPIFALQDDRVVEVVGEPIGVHKAVELIASHLRKFLVDRSVIPLFEMQMQMSNP 232
Query: 251 PRDHESIPGNPTGPSHPLP 269
P +H P P GP LP
Sbjct: 233 PIEHMP-PHQPWGPPQGLP 250
>gi|296087899|emb|CBI35182.3| unnamed protein product [Vitis vinifera]
Length = 511
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 98/186 (52%), Gaps = 12/186 (6%)
Query: 318 TFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRIS 377
FR+L ++VG +IG+ G I+ + +ET IK+++ GT +R +++S PD +
Sbjct: 118 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKEEPDSSLP 177
Query: 378 APQDAVLRVQTRIARAIPDNREQT-----VMTRLLVASNQIGCLLGKGGSIIAEMRKLSG 432
D +L+V RI + + V TRLLVA++Q G L+GK G + +++ S
Sbjct: 178 PAMDGLLKVHKRIVDGLEGDSSHMPPGGKVSTRLLVAASQAGSLIGKQGGTVKSIQEASN 237
Query: 433 AYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNP 492
+R+LG + +P A +++ VV + GE V +A+ I + LR ++R + P
Sbjct: 238 CIVRVLGAEDLPIFALQDDRVVEVVGEPIGVHKAVELIASHLRKFL-------VDRSVIP 290
Query: 493 TFLDQV 498
F Q+
Sbjct: 291 LFEMQM 296
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 102/259 (39%), Gaps = 83/259 (32%)
Query: 42 FPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNK 101
+PG +FR+L P K+ +IG+ GE + +I ++T I++ + G+ ER V++ A K
Sbjct: 113 WPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSA---K 169
Query: 102 KETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALL 161
+E +L + MDGL L
Sbjct: 170 EEPDSSLPPA--------------------------------MDGL-------------L 184
Query: 162 LVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI--------- 212
V +R+V+ E K RLLV ++Q G L+GK G +K I
Sbjct: 185 KVHKRIVD---GLEGDSSHMPPGGKVSTRLLVAASQAGSLIGKQGGTVKSIQEASNCIVR 241
Query: 213 ----DKLPTCALASDEVVQITGEVDTVRKALKLISHQL------------------LDNS 250
+ LP AL D VV++ GE V KA++LI+ L + N
Sbjct: 242 VLGAEDLPIFALQDDRVVEVVGEPIGVHKAVELIASHLRKFLVDRSVIPLFEMQMQMSNP 301
Query: 251 PRDHESIPGNPTGPSHPLP 269
P +H P P GP LP
Sbjct: 302 PIEHMP-PHQPWGPPQGLP 319
>gi|356528013|ref|XP_003532600.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
Length = 167
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 97/156 (62%), Gaps = 4/156 (2%)
Query: 302 HESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTED 361
H + ++R + +TFRLLCH RVG +IGK G +I+SL++ TG I++++A + D
Sbjct: 10 HSNAHVNRSRHYTTHVTFRLLCHASRVGAIIGKSGVLIKSLQEATGAKIRIVDAPPDSPD 69
Query: 362 RLIVISGPAHPDD-RISAPQDAVLRVQTRI--ARAIPDNREQTVMTRLLVASNQIGCLLG 418
R+I++S P+ +D +S Q+A+L+V R+ A + + V RLL ++Q+G ++G
Sbjct: 70 RVILVSAPSVTEDGELSTAQEALLKVFDRVLDVAAGTEVGDLVVSCRLLAETSQVGAVIG 129
Query: 419 KGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVV 454
K G ++ ++R +G IR+L + +P + ++E+V
Sbjct: 130 KAGKVVEKIRMDTGCKIRVL-NEGLPAGTAPSDEIV 164
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 88/203 (43%), Gaps = 65/203 (32%)
Query: 39 SKSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEAS 98
S+ + + FR+LC S++ +IGK G ++ + + TG IR+ + S +R++++ A
Sbjct: 18 SRHYTTHVTFRLLCHASRVGAIIGKSGVLIKSLQEATGAKIRIVDAPPDSPDRVILVSAP 77
Query: 99 DNKKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQK 158
SV DG E S Q+
Sbjct: 78 ------------------------------------------SVTEDG-----ELSTAQE 90
Query: 159 ALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI------ 212
ALL VF+R+++V TEV D + RLL ++QVG ++GK G V+++I
Sbjct: 91 ALLKVFDRVLDVAAGTEVGDLVVS------CRLLAETSQVGAVIGKAGKVVEKIRMDTGC 144
Query: 213 ------DKLPTCALASDEVVQIT 229
+ LP SDE+V+++
Sbjct: 145 KIRVLNEGLPAGTAPSDEIVEVS 167
>gi|412992928|emb|CCO16461.1| predicted protein [Bathycoccus prasinos]
Length = 703
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/238 (32%), Positives = 116/238 (48%), Gaps = 29/238 (12%)
Query: 265 SHPLPDHSVSSQGAPYATGHRDVADI-HLPMPPSIPKFHESGV-------LDRPKPSPE- 315
S+ D + Q YA HRD D HL + +P PE
Sbjct: 199 SYDFVDEAQGEQRRSYAPTHRDTTDDPHLKAQLEQRVQQQQSTHQSQTLPFSQPYRMPEN 258
Query: 316 -----ILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGT-EDRLIVISGP 369
L +RLLC + R G VIGK G ++ L++++G IKV V T +R+I I
Sbjct: 259 HGATRTLLYRLLCPNARAGSVIGKNGEKVKQLQRDSGAKIKVEPPVDSTIAERVIAIEAQ 318
Query: 370 AHPDDRISAP-QDAVLRV----------QTRIARAIPDNREQTVMTRLLVASNQIGCLLG 418
D + AP Q A+LR+ T I A +N ++ RLL+ S+QI ++G
Sbjct: 319 DVDDPTVWAPSQIALLRIVETIVLDAERNTTIGAAEENNGH--IVIRLLLPSSQIRNVIG 376
Query: 419 KGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGE-FEAVQEALFQITTRLR 475
+ G++I +R SG+++R+L + P+CA N+EV+ I+ E E V AL ITT+LR
Sbjct: 377 RFGNVIERIRVGSGSHVRVLPSSETPRCAKRNDEVLQISAESMENVASALAMITTQLR 434
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 112/232 (48%), Gaps = 68/232 (29%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGS-DERLVVIEASDNKKET 104
+++R+LCP ++ VIGK+GE + Q+ +D+G I+VE V + ER++ IEA D
Sbjct: 265 LLYRLLCPNARAGSVIGKNGEKVKQLQRDSGAKIKVEPPVDSTIAERVIAIEAQD----- 319
Query: 105 SENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVF 164
V++ +V + Q ALL +
Sbjct: 320 --------------------------------VDDPTVW----------APSQIALLRIV 337
Query: 165 ERMV-EVEPETEV-ADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI---------- 212
E +V + E T + A +EN + V+RLL+ S+Q+ ++G+ G VI++I
Sbjct: 338 ETIVLDAERNTTIGAAEEN--NGHIVIRLLLPSSQIRNVIGRFGNVIERIRVGSGSHVRV 395
Query: 213 ---DKLPTCALASDEVVQITGE-VDTVRKALKLISHQL-LDNSPRDHESIPG 259
+ P CA +DEV+QI+ E ++ V AL +I+ QL LD R HE +PG
Sbjct: 396 LPSSETPRCAKRNDEVLQISAESMENVASALAMITTQLRLDPPVRAHE-LPG 446
>gi|359489188|ref|XP_002272998.2| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera]
Length = 343
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 136/271 (50%), Gaps = 42/271 (15%)
Query: 251 PRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRP 310
P+ P PT P D G A+ +VAD H PK R
Sbjct: 13 PQSEAPAPSEPTSMKRPRDDD-----GGVIASATGEVADDHRS-----PK--------RR 54
Query: 311 KPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPA 370
+ ++L FR++ ++G VIGK G+ I+ +++ET IK+ +A++ E+R+I+IS
Sbjct: 55 AKNQDVL-FRIVVPSRQIGKVIGKEGSRIQKIREETKATIKIADAIARHEERVIIISSK- 112
Query: 371 HPDDRISAPQDAVLRVQTRIARAIPDNREQTVM---------TRLLVASNQIGCLLGKGG 421
++ IS ++A+L+V + I + N + + RLL+A +Q GCL+G G
Sbjct: 113 DSENVISDAENALLQVASLILKEDDSNTDALKVGVGHVVANAIRLLIAGSQAGCLIGMSG 172
Query: 422 SIIAEMRKLSGAYIRILGKDQIPKCAS--ENEEVVLINGEFEAVQEALFQITTRLRHHFF 479
I ++R SGA I IL ++Q+P CAS +++ +V I+G+ AV +AL +I +LR +
Sbjct: 173 QNIEKLRNSSGATITILPQNQLPLCASAHDSDRMVQISGDVPAVLKALEEIGCQLRENPP 232
Query: 480 RDAF-------PSINRP----LNPTFLDQVS 499
R P+ NR L+P D V+
Sbjct: 233 RQVISISPIYNPNTNRTSQQYLDPASADYVT 263
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 96/396 (24%), Positives = 159/396 (40%), Gaps = 133/396 (33%)
Query: 6 TPSKRPHDDD-------------NHTEPNGKEKSQKLAGDYSENQPSKSFPGGIMFRVLC 52
T KRP DDD +H P + K+Q ++FR++
Sbjct: 24 TSMKRPRDDDGGVIASATGEVADDHRSPKRRAKNQD-----------------VLFRIVV 66
Query: 53 PVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASI 112
P +I VIGK+G + +I ++T TI++ + ++ +ER+++I + D SEN+ I
Sbjct: 67 PSRQIGKVIGKEGSRIQKIREETKATIKIADAIARHEERVIIISSKD-----SENV---I 118
Query: 113 ERSENNGREEASVADESDNKKEDS--VNEGSVLMDGLNSEKETSKVQKALLLVFERMVEV 170
+EN + AS+ + D+ D+ V G V+ +
Sbjct: 119 SDAENALLQVASLILKEDDSNTDALKVGVGHVVANA------------------------ 154
Query: 171 EPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI-------------DKLPT 217
+RLL+ +Q GCL+G G I+++ ++LP
Sbjct: 155 ------------------IRLLIAGSQAGCLIGMSGQNIEKLRNSSGATITILPQNQLPL 196
Query: 218 CALA--SDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSS 275
CA A SD +VQI+G+V V KAL+ I QL +N PR SI P+ + + +
Sbjct: 197 CASAHDSDRMVQISGDVPAVLKALEEIGCQLRENPPRQVISI--------SPIYNPNTNR 248
Query: 276 QGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKG 335
Y + P+ S + +T ++ + VGG+IG+
Sbjct: 249 TSQQY-------------LDPA---------------SADYVTLNMMIPETLVGGLIGRC 280
Query: 336 GAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAH 371
G+ I ++ E+G IKV R I G A
Sbjct: 281 GSNISRIRNESGAMIKVYGGKGEQNHRQIQFGGSAQ 316
>gi|387915508|gb|AFK11363.1| alphaCP-3 [Callorhinchus milii]
Length = 349
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 157/366 (42%), Gaps = 60/366 (16%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R++ I+GP D
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT--DAIF 69
Query: 377 SAPQDAVLRVQTRIARAI---PDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + + I ++ P + V RL+V ++Q G L+GKGGS I E+R+ +GA
Sbjct: 70 KAFAMIAFKFEEDINNSMTNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDA-FPSINRPLNP 492
+++ G D +P + E V I+G +A+ + + QI + + A P +P +
Sbjct: 130 QVQVAG-DMLP---NSTERAVTISGMPDAIIQCVKQICVVMLESPPKGATIPYRPKPASA 185
Query: 493 TFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIH 552
+ F G + + G + PH D + + +
Sbjct: 186 PVI--------FAGGQAYTIQGQCA---------------------IPHPDDACLLSAEY 216
Query: 553 RPGM------------PPHMPDMKPWGPQGL---MEVGGPMGFPDFVG----PPHRRVPV 593
+ + P W P+ L ME+ + G P +
Sbjct: 217 KTALTSTLWRSPQLAHPSSQLKEAAWRPESLRGKMELKNCNEESENWGMDANPQASTHEL 276
Query: 594 VVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQ 653
+P L+ I G G + +IRQ+S A+I I + G+TE I I+G+P AQ LI
Sbjct: 277 TIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSTERQITITGSPANISLAQYLIN 336
Query: 654 AFVMSE 659
A + SE
Sbjct: 337 ARLTSE 342
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 99/236 (41%), Gaps = 57/236 (24%)
Query: 187 FVLRLLVLSTQVGCLLGKGGCVIKQI------------DKLPTCALASDEVVQITGEVDT 234
LRL+V ++Q G L+GKGG IK+I D LP +++ V I+G D
Sbjct: 98 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN---STERAVTISGMPDA 154
Query: 235 VRKALKLISHQLLDNSPRDHESIPGNPTGPSHPL-----PDHSVSSQGA-PY-------A 281
+ + +K I +L++ P+ +IP P S P+ +++ Q A P+ +
Sbjct: 155 IIQCVKQICVVMLESPPKGA-TIPYRPKPASAPVIFAGGQAYTIQGQCAIPHPDDACLLS 213
Query: 282 TGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEIL------------------------ 317
++ L P + H S L PE L
Sbjct: 214 AEYKTALTSTLWRSPQLA--HPSSQLKEAAWRPESLRGKMELKNCNEESENWGMDANPQA 271
Query: 318 -TFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG-PAH 371
T L ++ +G +IG+ G I ++Q +G IK+ A G+ +R I I+G PA+
Sbjct: 272 STHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSTERQITITGSPAN 327
>gi|297734587|emb|CBI16638.3| unnamed protein product [Vitis vinifera]
Length = 346
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 136/271 (50%), Gaps = 42/271 (15%)
Query: 251 PRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRP 310
P+ P PT P D G A+ +VAD H PK R
Sbjct: 13 PQSEAPAPSEPTSMKRPRDDD-----GGVIASATGEVADDHRS-----PK--------RR 54
Query: 311 KPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPA 370
+ ++L FR++ ++G VIGK G+ I+ +++ET IK+ +A++ E+R+I+IS
Sbjct: 55 AKNQDVL-FRIVVPSRQIGKVIGKEGSRIQKIREETKATIKIADAIARHEERVIIISSK- 112
Query: 371 HPDDRISAPQDAVLRVQTRIARAIPDNREQTVM---------TRLLVASNQIGCLLGKGG 421
++ IS ++A+L+V + I + N + + RLL+A +Q GCL+G G
Sbjct: 113 DSENVISDAENALLQVASLILKEDDSNTDALKVGVGHVVANAIRLLIAGSQAGCLIGMSG 172
Query: 422 SIIAEMRKLSGAYIRILGKDQIPKCAS--ENEEVVLINGEFEAVQEALFQITTRLRHHFF 479
I ++R SGA I IL ++Q+P CAS +++ +V I+G+ AV +AL +I +LR +
Sbjct: 173 QNIEKLRNSSGATITILPQNQLPLCASAHDSDRMVQISGDVPAVLKALEEIGCQLRENPP 232
Query: 480 RDAF-------PSINRP----LNPTFLDQVS 499
R P+ NR L+P D V+
Sbjct: 233 RQVISISPIYNPNTNRTSQQYLDPASADYVT 263
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 96/396 (24%), Positives = 159/396 (40%), Gaps = 133/396 (33%)
Query: 6 TPSKRPHDDD-------------NHTEPNGKEKSQKLAGDYSENQPSKSFPGGIMFRVLC 52
T KRP DDD +H P + K+Q ++FR++
Sbjct: 24 TSMKRPRDDDGGVIASATGEVADDHRSPKRRAKNQD-----------------VLFRIVV 66
Query: 53 PVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASI 112
P +I VIGK+G + +I ++T TI++ + ++ +ER+++I + D SEN+ I
Sbjct: 67 PSRQIGKVIGKEGSRIQKIREETKATIKIADAIARHEERVIIISSKD-----SENV---I 118
Query: 113 ERSENNGREEASVADESDNKKEDS--VNEGSVLMDGLNSEKETSKVQKALLLVFERMVEV 170
+EN + AS+ + D+ D+ V G V+ +
Sbjct: 119 SDAENALLQVASLILKEDDSNTDALKVGVGHVVANA------------------------ 154
Query: 171 EPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI-------------DKLPT 217
+RLL+ +Q GCL+G G I+++ ++LP
Sbjct: 155 ------------------IRLLIAGSQAGCLIGMSGQNIEKLRNSSGATITILPQNQLPL 196
Query: 218 CALA--SDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSS 275
CA A SD +VQI+G+V V KAL+ I QL +N PR SI P+ + + +
Sbjct: 197 CASAHDSDRMVQISGDVPAVLKALEEIGCQLRENPPRQVISI--------SPIYNPNTNR 248
Query: 276 QGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKG 335
Y + P+ S + +T ++ + VGG+IG+
Sbjct: 249 TSQQY-------------LDPA---------------SADYVTLNMMIPETLVGGLIGRC 280
Query: 336 GAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAH 371
G+ I ++ E+G IKV R I G A
Sbjct: 281 GSNISRIRNESGAMIKVYGGKGEQNHRQIQFGGSAQ 316
>gi|449442959|ref|XP_004139248.1| PREDICTED: poly(rC)-binding protein 3-like [Cucumis sativus]
Length = 483
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 95/183 (51%), Gaps = 13/183 (7%)
Query: 318 TFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRIS 377
FR+L ++VG +IG+ G I+ + +ET IK+++ GT +R +++S PD
Sbjct: 86 VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKDEPDSAFP 145
Query: 378 APQDAVLRVQTRIARAIPD------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLS 431
D +LRV RI + N V TRLLVA++Q G L+GK G + +++ S
Sbjct: 146 PAVDGLLRVHKRIVDGLEGDNAHAPNAGSKVSTRLLVAASQAGSLIGKQGGTVKSIQEES 205
Query: 432 GAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLN 491
+R+LG + +P A +++ VV + G+ V +A+ I + LR ++R +
Sbjct: 206 NCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKFL-------VDRSII 258
Query: 492 PTF 494
P F
Sbjct: 259 PVF 261
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 93/218 (42%), Gaps = 63/218 (28%)
Query: 42 FPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNK 101
+PG +FR+L P K+ +IG+ GE + +I ++T I++ + G+ ER V++ A
Sbjct: 81 WPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAK--- 137
Query: 102 KETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALL 161
DE D+ +V+ LL
Sbjct: 138 -------------------------DEPDSAFPPAVD--------------------GLL 152
Query: 162 LVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI--------- 212
V +R+V+ E + A N SK RLLV ++Q G L+GK G +K I
Sbjct: 153 RVHKRIVD-GLEGDNAHAPNA-GSKVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVR 210
Query: 213 ----DKLPTCALASDEVVQITGEVDTVRKALKLISHQL 246
+ LP AL D VV++ G+ V KA++LI+ L
Sbjct: 211 VLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHL 248
>gi|410900550|ref|XP_003963759.1| PREDICTED: poly(rC)-binding protein 3-like [Takifugu rubripes]
Length = 434
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 98/359 (27%), Positives = 151/359 (42%), Gaps = 82/359 (22%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E S +R++ I+G
Sbjct: 17 LTLRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGSS--PERIVTITGAT------ 68
Query: 377 SAPQDAVLRVQTRIAR-------AIPDNREQT----VMTRLLVASNQIGCLLGKGGSIIA 425
+A+ R IA+ A N T V RL+ +Q G L+GKGGS I
Sbjct: 69 ----EAIFRAFAMIAQKFEEDISAAMSNSSVTSKPPVTLRLVFPGSQCGSLIGKGGSKIK 124
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPS 485
E+R+ +GA +++ G D +P E V I+G +A+ + + I + +
Sbjct: 125 EIRETTGAQVQVAG-DMLPD---STERAVTISGTPQAITQCVRHICSVMLE--------- 171
Query: 486 INRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGP--SFHKFDAVGGPPPPGSF-HPHD 542
+ P T P+ R + G+++ P S H F PG + H
Sbjct: 172 -SPPKGATI-----PY-----RPKAVTVGVHAVLAPQQSAHAFAI------PGQYTFAHQ 214
Query: 543 D----HSAFMHHIHRPGM---PPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVV 595
D H M HI P + P P + P P E+ P DF+G
Sbjct: 215 DLTKLHQLAMQHIPLPSLGQSNPTFPGLDPSAPTSSQEMAIPN---DFIG---------- 261
Query: 596 PRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQA 654
I G G+ + +IRQ+S A I I G+ + I+G+P + AQ LI A
Sbjct: 262 ------CIIGRQGSKINEIRQVSGAHIKIASTTDGSAVRQVTITGSPASINVAQYLINA 314
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 117/266 (43%), Gaps = 49/266 (18%)
Query: 136 SVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLV 193
+++EGS + T + +A ++ ++ E + A ++ +SK LRL+
Sbjct: 51 NISEGSSPERIVTITGATEAIFRAFAMIAQKF---EEDISAAMSNSSVTSKPPVTLRLVF 107
Query: 194 LSTQVGCLLGKGGCVIKQI------------DKLPTCALASDEVVQITGEVDTVRKALKL 241
+Q G L+GKGG IK+I D LP +++ V I+G + + ++
Sbjct: 108 PGSQCGSLIGKGGSKIKEIRETTGAQVQVAGDMLPD---STERAVTISGTPQAITQCVRH 164
Query: 242 ISHQLLDNSPRDHESIPGNPTGPS---HPL--PDHSVSSQGAP--YATGHRDVADIH--- 291
I +L++ P+ +IP P + H + P S + P Y H+D+ +H
Sbjct: 165 ICSVMLESPPKG-ATIPYRPKAVTVGVHAVLAPQQSAHAFAIPGQYTFAHQDLTKLHQLA 223
Query: 292 ---LPMP------PSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSL 342
+P+P P+ P S P S E + ++ +G +IG+ G+ I +
Sbjct: 224 MQHIPLPSLGQSNPTFPGLDPSA----PTSSQE-----MAIPNDFIGCIIGRQGSKINEI 274
Query: 343 KQETGCDIKVMEAVSGTEDRLIVISG 368
+Q +G IK+ G+ R + I+G
Sbjct: 275 RQVSGAHIKIASTTDGSAVRQVTITG 300
Score = 39.7 bits (91), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 7/74 (9%)
Query: 401 TVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEF 460
T+ RLL+ ++G ++GK G + +MR+ SGA I I S E +V I G
Sbjct: 16 TLTLRLLMHGKEVGSIIGKKGETVKKMREESGARINI-------SEGSSPERIVTITGAT 68
Query: 461 EAVQEALFQITTRL 474
EA+ A I +
Sbjct: 69 EAIFRAFAMIAQKF 82
>gi|359479585|ref|XP_002275698.2| PREDICTED: uncharacterized protein LOC100266515 [Vitis vinifera]
Length = 858
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 91/160 (56%), Gaps = 4/160 (2%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISA 378
FR+L ++VG +IG+ G I+ L +ET IK+++ GT +R +++S PD I+
Sbjct: 42 FRMLIPVQKVGYIIGRKGEHIKKLSEETKARIKILDGPPGTSERAVMVSAKEEPDAPIAP 101
Query: 379 PQDAVLRVQTRIARA---IPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYI 435
D +LRV I +P V TRLLV + Q G L+GK G+ I +++ S +
Sbjct: 102 AIDGLLRVHKCIMDVESDVPSAAGVMVSTRLLVVAAQAGSLIGKQGATIKSIQEASNCIV 161
Query: 436 RILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLR 475
R+LG++ +P A +N+ VV I GE +V +A+ I + LR
Sbjct: 162 RVLGEN-LPLFALQNDTVVEIQGEPASVHKAVELIASNLR 200
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 94/217 (43%), Gaps = 65/217 (29%)
Query: 42 FPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNK 101
+PG +FR+L PV K+ +IG+ GE + ++S++T I++ + G+ ER V++ A +
Sbjct: 36 WPGENVFRMLIPVQKVGYIIGRKGEHIKKLSEETKARIKILDGPPGTSERAVMVSAKE-- 93
Query: 102 KETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALL 161
+A +A D LL
Sbjct: 94 ------------------EPDAPIAPAID----------------------------GLL 107
Query: 162 LVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI--------- 212
V + +++VE +D + RLLV++ Q G L+GK G IK I
Sbjct: 108 RVHKCIMDVE-----SDVPSAAGVMVSTRLLVVAAQAGSLIGKQGATIKSIQEASNCIVR 162
Query: 213 ---DKLPTCALASDEVVQITGEVDTVRKALKLISHQL 246
+ LP AL +D VV+I GE +V KA++LI+ L
Sbjct: 163 VLGENLPLFALQNDTVVEIQGEPASVHKAVELIASNL 199
>gi|134026176|gb|AAI35317.1| LOC733863 protein [Xenopus (Silurana) tropicalis]
Length = 475
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 160/372 (43%), Gaps = 66/372 (17%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R++ I+GP D
Sbjct: 17 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--SCPERIVTITGPT--DAIF 72
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A L+ + I ++ ++ + V RL+V ++Q G L+GKGGS I E+R+ +GA
Sbjct: 73 KAFSMIALKFEEDINASMTNSTVTSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGA 132
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDA-FPSINRPL-- 490
+++ G D +P + E V I+G +A+ + + QI + + A P +P
Sbjct: 133 QVQVAG-DMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASG 188
Query: 491 -------------------NPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGG 531
N T L Q P P+F + G Y+
Sbjct: 189 PIIFAGGQVRAETILASAGNHTVLAQPQPAPAFAIQ------GQYAI------------- 229
Query: 532 PPPPGSFHPHDDHS------AFMHHIHRPGMPPHMPDMK--PWGPQGLMEVGGPMGFPDF 583
P P H +++ F H+ H M+ P+ P G GFP
Sbjct: 230 -PHPDVSSAHANYTLLFLFICFGQHLLSTLTKLHQLAMQHTPFTPLGQTTP----GFPGL 284
Query: 584 -VGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTP 642
P + +P L+ I G G+ + +IRQ+S A+I I + G E + I+G+P
Sbjct: 285 DATSPTSSHELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANASEGNGERQVTITGSP 344
Query: 643 EQTHAAQSLIQA 654
AQ LI A
Sbjct: 345 ANISLAQYLINA 356
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 125/302 (41%), Gaps = 79/302 (26%)
Query: 136 SVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLV 193
+++EGS + T + KA ++ ++ E + + +T +SK LRL+V
Sbjct: 51 NISEGSCPERIVTITGPTDAIFKAFSMI---ALKFEEDINASMTNSTVTSKPPVTLRLVV 107
Query: 194 LSTQVGCLLGKGGCVIKQI------------DKLPTCALASDEVVQITGEVDTVRKALKL 241
++Q G L+GKGG IK+I D LP +++ V I+G D + + +K
Sbjct: 108 PASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN---STERAVTISGTPDAIIQCVKQ 164
Query: 242 ISHQLLDNSPRDHESIPGNPTGPSHPL----------------PDHSVSSQGAP------ 279
I +L++ P+ +IP P S P+ +H+V +Q P
Sbjct: 165 ICVVMLESPPKG-ATIPYRPKPASGPIIFAGGQVRAETILASAGNHTVLAQPQPAPAFAI 223
Query: 280 ---YATGHRDVADIHLP-------------MPPSIPKFHESGV----------------- 306
YA H DV+ H + ++ K H+ +
Sbjct: 224 QGQYAIPHPDVSSAHANYTLLFLFICFGQHLLSTLTKLHQLAMQHTPFTPLGQTTPGFPG 283
Query: 307 LDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVI 366
LD P+ + L ++ +G +IG+ G+ I ++Q +G IK+ A G +R + I
Sbjct: 284 LDATSPTS---SHELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANASEGNGERQVTI 340
Query: 367 SG 368
+G
Sbjct: 341 TG 342
>gi|348507477|ref|XP_003441282.1| PREDICTED: poly(rC)-binding protein 3-like [Oreochromis niloticus]
Length = 434
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 97/357 (27%), Positives = 150/357 (42%), Gaps = 78/357 (21%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E S +R++ I+GP
Sbjct: 17 LTLRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGSS--PERIVTITGPT------ 68
Query: 377 SAPQDAVLRVQTRIAR-------AIPDNREQT----VMTRLLVASNQIGCLLGKGGSIIA 425
+ + R + IA+ A N T V RL+ +Q G L+GKGGS I
Sbjct: 69 ----EGIFRAFSMIAQKFEEDITAAMTNSNVTSKPPVTLRLVFPGSQCGSLIGKGGSKIK 124
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPS 485
E+R+ +GA +++ G D +P E V I+G +A+ + + I + +
Sbjct: 125 EIRETTGAQVQVAG-DMLPD---STERAVTISGTPQAITQCVRHICSVMLE--------- 171
Query: 486 INRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSF-HPHDD- 543
+ P T P+ R ++ P G ++ P H A PG + H D
Sbjct: 172 -SPPKGATI-----PY-----RPKVIPAGTHAVLAPQ-HSAQAFA---IPGQYAFAHQDL 216
Query: 544 ---HSAFMHHIHRPGM---PPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPR 597
H M HI P + P P + P E+ P DF+G
Sbjct: 217 TKLHQLAMQHIPLPSLGQSNPTFPGLDASAPTSSQELAIPN---DFIG------------ 261
Query: 598 SLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQA 654
I G G+ + +IRQ+S A I I G+ + I+G+P AQ LI A
Sbjct: 262 ----CIIGRQGSKINEIRQVSGAHIKIASATDGSAMRQVTITGSPASISVAQYLINA 314
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 97/211 (45%), Gaps = 44/211 (20%)
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQI------------DKLPTCALASDEVVQITGEVDTVR 236
LRL+ +Q G L+GKGG IK+I D LP +++ V I+G +
Sbjct: 103 LRLVFPGSQCGSLIGKGGSKIKEIRETTGAQVQVAGDMLPD---STERAVTISGTPQAIT 159
Query: 237 KALKLISHQLLDNSPRDHESIPGNPT---GPSHPL--PDHSVSSQGAP--YATGHRDVAD 289
+ ++ I +L++ P+ +IP P +H + P HS + P YA H+D+
Sbjct: 160 QCVRHICSVMLESPPKG-ATIPYRPKVIPAGTHAVLAPQHSAQAFAIPGQYAFAHQDLTK 218
Query: 290 I------HLPMP------PSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGA 337
+ H+P+P P+ P S P S E L ++ +G +IG+ G+
Sbjct: 219 LHQLAMQHIPLPSLGQSNPTFPGLDASA----PTSSQE-----LAIPNDFIGCIIGRQGS 269
Query: 338 IIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
I ++Q +G IK+ A G+ R + I+G
Sbjct: 270 KINEIRQVSGAHIKIASATDGSAMRQVTITG 300
>gi|224097170|ref|XP_002310862.1| predicted protein [Populus trichocarpa]
gi|222853765|gb|EEE91312.1| predicted protein [Populus trichocarpa]
Length = 245
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 104/196 (53%), Gaps = 16/196 (8%)
Query: 293 PMPPSIPKFHESGVLD----RPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGC 348
PM +P + E+ D +P ++ FR++C G +IG GG+++R+L+ +TG
Sbjct: 55 PMCSLLPTYSENIATDGDHKKPNEQSQV-QFRMICSHGAAGRIIGTGGSVVRALQNQTGA 113
Query: 349 DIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRI-------ARAIPDNREQT 401
I ++ ++DRL+ +S + + S Q+A+L V R AR++ E T
Sbjct: 114 SIIFARPITNSDDRLVTVSALENLESSHSPAQNALLLVFARSIEHDIERARSLGLIEEIT 173
Query: 402 VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFE 461
V LL+ SN++ CL+G+GG + +EM + +GA I+I+ DQ AS+N+ VV + +
Sbjct: 174 VTATLLLPSNKVYCLIGRGGRVDSEMIETTGADIQIMQGDQFFDLASKNDAVV----QVQ 229
Query: 462 AVQEALFQITTRLRHH 477
+ F + +L H
Sbjct: 230 FLSSYFFLLVFKLLRH 245
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 89/246 (36%), Gaps = 94/246 (38%)
Query: 2 SLPLTPSKRPHDDDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIMFRVLCPVSKIDGVI 61
SL T S+ D +H +PN E+SQ + FR++C +I
Sbjct: 58 SLLPTYSENIATDGDHKKPN--EQSQ------------------VQFRMICSHGAAGRII 97
Query: 62 GKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGRE 121
G G ++ + TG +I ++ SD+RLV + A ENLE+S
Sbjct: 98 GTGGSVVRALQNQTGASIIFARPITNSDDRLVTVSA-------LENLESS---------- 140
Query: 122 EASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQEN 181
S Q ALLLVF R +E D E
Sbjct: 141 -------------------------------HSPAQNALLLVFARSIE-------HDIER 162
Query: 182 TKSSKFV------LRLLVLSTQVGCLLGKGGCV-------------IKQIDKLPTCALAS 222
+S + LL+ S +V CL+G+GG V I Q D+ A +
Sbjct: 163 ARSLGLIEEITVTATLLLPSNKVYCLIGRGGRVDSEMIETTGADIQIMQGDQFFDLASKN 222
Query: 223 DEVVQI 228
D VVQ+
Sbjct: 223 DAVVQV 228
>gi|417399108|gb|JAA46584.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 333
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 156/355 (43%), Gaps = 53/355 (14%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTNAIFKA 71
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I+ ++ ++ + V RL+V ++Q G L+GKGG I E+R+ +GA
Sbjct: 72 FA--MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPT 493
+++ G D +P + E + I G +++ E + QI + + + P P
Sbjct: 130 QVQVAG-DMLP---NSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPK 185
Query: 494 FLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHR 553
SP F G + + G Y+ P K H M H
Sbjct: 186 --PSSSPVI-FAGGQAYTIQGQYAIPQPDLTKL-----------------HQLAMQQSHF 225
Query: 554 P---------GMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQ 604
P G+ P++K + + + +P +L+ I
Sbjct: 226 PMTHGNTGFSGIESSSPEVKGY-------------WASLDASTQTTHELTIPNNLIGCII 272
Query: 605 GEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
G GA + +IRQ+S A+I I +P G++ + I+G+ AQ LI A + SE
Sbjct: 273 GRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLINARLSSE 327
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 110/250 (44%), Gaps = 36/250 (14%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T +S+ LRL+V ++Q G L+GKGGC IK
Sbjct: 65 TNAIFKAFAMIIDKL---EEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIP 258
+I D LP + + I + K + ++ + L SP +IP
Sbjct: 122 EIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIP 181
Query: 259 GNPTGPSHPL---PDHSVSSQGAPYATGHRDVADIH-LPMPPS-IPKFH-ESGVLDRPKP 312
P S P+ + + QG YA D+ +H L M S P H +G
Sbjct: 182 YRPKPSSSPVIFAGGQAYTIQGQ-YAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESS 240
Query: 313 SPEI------------LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTE 360
SPE+ T L + +G +IG+ GA I ++Q +G IK+ V G+
Sbjct: 241 SPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSS 300
Query: 361 DRLIVISGPA 370
R + I+G A
Sbjct: 301 GRQVTITGSA 310
>gi|449531912|ref|XP_004172929.1| PREDICTED: poly(rC)-binding protein 3-like [Cucumis sativus]
Length = 453
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 95/182 (52%), Gaps = 13/182 (7%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISA 378
FR+L ++VG +IG+ G I+ + +ET IK+++ GT +R +++S PD
Sbjct: 87 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKDEPDSAFPP 146
Query: 379 PQDAVLRVQTRIARAIPD------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSG 432
D +LRV RI + N V TRLLVA++Q G L+GK G + +++ S
Sbjct: 147 AVDGLLRVHKRIVDGLEGDNAHAPNAGSKVSTRLLVAASQAGSLIGKQGGTVKSIQEESN 206
Query: 433 AYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNP 492
+R+LG + +P A +++ VV + G+ V +A+ I + LR ++R + P
Sbjct: 207 CIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKFL-------VDRSIIP 259
Query: 493 TF 494
F
Sbjct: 260 VF 261
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 95/219 (43%), Gaps = 65/219 (29%)
Query: 42 FPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNK 101
+PG +FR+L P K+ +IG+ GE + +I ++T I++ + G+ ER V++ A
Sbjct: 81 WPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAK--- 137
Query: 102 KETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALL 161
DE D+ +V DG LL
Sbjct: 138 -------------------------DEPDSAFPPAV-------DG-------------LL 152
Query: 162 LVFERMVE-VEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI-------- 212
V +R+V+ +E + A +K S RLLV ++Q G L+GK G +K I
Sbjct: 153 RVHKRIVDGLEGDNAHAPNAGSKVST---RLLVAASQAGSLIGKQGGTVKSIQEESNCIV 209
Query: 213 -----DKLPTCALASDEVVQITGEVDTVRKALKLISHQL 246
+ LP AL D VV++ G+ V KA++LI+ L
Sbjct: 210 RVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHL 248
>gi|224116392|ref|XP_002317286.1| predicted protein [Populus trichocarpa]
gi|222860351|gb|EEE97898.1| predicted protein [Populus trichocarpa]
Length = 363
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 155/356 (43%), Gaps = 61/356 (17%)
Query: 316 ILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVI--------- 366
++ +R+LC D +G VIGK G +I S++ E+ +KV++ G +DR+I I
Sbjct: 35 LIVYRILCPDGVIGSVIGKSGKVINSIRHESRARVKVVDPFPGAKDRIITIYCHIKEKED 94
Query: 367 ---SGPAHPDDRISAPQDAVLRVQTRIARAIP-----DNR-EQTVMTRLLVASNQIGCLL 417
+ + + A QDA+L+V I+ A+ D R ++LV ++Q ++
Sbjct: 95 VDVDDDFNHTNPLCAAQDALLKVHAAISNAVASLGDSDKRLRDKEECQILVPASQSANII 154
Query: 418 GKGGSIIAEMRKLSGAYIRILGKDQIP---KCASENEEVVLINGEFEAVQEALFQITTRL 474
GK G+ I +R + I+I+ KD CA + + +LI GE EAV++ALF ++ +
Sbjct: 155 GKAGATIKRLRSKTRTSIKIIAKDSTDPTHSCAMDFDNFLLITGESEAVKKALFAVSA-I 213
Query: 475 RHHFFRDAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPP 534
+ F P PL T + P G Y N P PP
Sbjct: 214 MYKF----NPKEEIPLEATVPEPPPSIIIPSDVPIYQPGGFYPNAEPIVSSRSV---PPI 266
Query: 535 PGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQG----LMEVGGPMGFPDFVGPPHRR 590
G+ H+P+++ +G G + P+ P F G R
Sbjct: 267 LGA--------------------THIPELQGYGDMGSSWPVYTSTLPV-VPSF-GNVSRY 304
Query: 591 VPVVVPRSLVPI-----IQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGT 641
+++ R L P + G+ G+ +K IRQ S A+I + D K E +I ++ T
Sbjct: 305 EELII-RVLCPFDKIGRVIGKGGSTIKSIRQASGARIEVDDTKADRDECIITVTAT 359
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 84/372 (22%), Positives = 149/372 (40%), Gaps = 94/372 (25%)
Query: 44 GGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKE 103
G I++R+LCP I VIGK G++++ I ++ ++V + G+ +R++ I +KE
Sbjct: 34 GLIVYRILCPDGVIGSVIGKSGKVINSIRHESRARVKVVDPFPGAKDRIITIYCHIKEKE 93
Query: 104 TSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLV 163
+ + N Q ALL V
Sbjct: 94 DVDVDDD------------------------------------FNHTNPLCAAQDALLKV 117
Query: 164 FERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI----------- 212
+ + D + K ++LV ++Q ++GK G IK++
Sbjct: 118 HAAISNAV--ASLGDSDKRLRDKEECQILVPASQSANIIGKAGATIKRLRSKTRTSIKII 175
Query: 213 -----DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPT----- 262
D +CA+ D + ITGE + V+KAL +S + +P+ E IP T
Sbjct: 176 AKDSTDPTHSCAMDFDNFLLITGESEAVKKALFAVSAIMYKFNPK--EEIPLEATVPEPP 233
Query: 263 --------------GPSHPLPDHSVSSQGAPYATGHRDVAD------------IHLPMPP 296
G +P + VSS+ P G + + ++ P
Sbjct: 234 PSIIIPSDVPIYQPGGFYPNAEPIVSSRSVPPILGATHIPELQGYGDMGSSWPVYTSTLP 293
Query: 297 SIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAV 356
+P F G + R E L R+LC +++G VIGKGG+ I+S++Q +G I+V +
Sbjct: 294 VVPSF---GNVSRY----EELIIRVLCPFDKIGRVIGKGGSTIKSIRQASGARIEVDDTK 346
Query: 357 SGTEDRLIVISG 368
+ ++ +I ++
Sbjct: 347 ADRDECIITVTA 358
Score = 45.8 bits (107), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 33/54 (61%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASD 99
++ RVLCP KI VIGK G + I Q +G I V++T + DE ++ + A++
Sbjct: 307 LIIRVLCPFDKIGRVIGKGGSTIKSIRQASGARIEVDDTKADRDECIITVTATE 360
>gi|327275209|ref|XP_003222366.1| PREDICTED: poly(rC)-binding protein 3-like [Anolis carolinensis]
Length = 461
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 161/354 (45%), Gaps = 38/354 (10%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R++ I+GP D
Sbjct: 17 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--SCPERIVTITGPT--DAIF 72
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A L+ + I ++ ++ + V RL++ ++Q G L+GKGGS I E+R+ +GA
Sbjct: 73 KAFSMIALKFEEDINASMTNSTVTSKPPVTLRLVIPASQCGSLIGKGGSKIKEIRESTGA 132
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPT 493
+++ G D +P + E V I+G +A+ + + QI + + A P P
Sbjct: 133 QVQVAG-DMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGA----TIPYRP- 183
Query: 494 FLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFH-----PHDDHSA-- 546
+ + P ++ + ++ G H A P + PH D S+
Sbjct: 184 ---KPASAPIIFAGGQVRADTLLASAG--NHAVLAQPQTAPAFTIQGQYAIPHPDVSSMH 238
Query: 547 ---FMHHIHRPGMPPHMPDMK--PWGPQGLMEVGGPMGFPDF-VGPPHRRVPVVVPRSLV 600
F++ + H M+ P+ P G GFP P + +P L+
Sbjct: 239 VLYFLYSLLPSLTKLHQLAMQHPPFTPLGQTTP----GFPGLDASTPASSHELTIPNDLI 294
Query: 601 PIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQA 654
I G G+ + +IRQ+S A+I I + G+ E + I+G+P AQ LI A
Sbjct: 295 GCIIGRQGSKINEIRQMSGAQIKIANATEGSAERQVTITGSPANISLAQYLINA 348
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 130/294 (44%), Gaps = 71/294 (24%)
Query: 136 SVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLV 193
+++EGS + T + KA ++ ++ E + + +T +SK LRL++
Sbjct: 51 NISEGSCPERIVTITGPTDAIFKAFSMI---ALKFEEDINASMTNSTVTSKPPVTLRLVI 107
Query: 194 LSTQVGCLLGKGGCVIKQI------------DKLPTCALASDEVVQITGEVDTVRKALKL 241
++Q G L+GKGG IK+I D LP +++ V I+G D + + +K
Sbjct: 108 PASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN---STERAVTISGTPDAIIQCVKQ 164
Query: 242 ISHQLLDNSPRDHESIPGNPTGPSHPL----------------PDHSVSSQ--GAP---- 279
I +L++ P+ +IP P S P+ +H+V +Q AP
Sbjct: 165 ICVVMLESPPKG-ATIPYRPKPASAPIIFAGGQVRADTLLASAGNHAVLAQPQTAPAFTI 223
Query: 280 ---YATGHRDVADIHL-----PMPPSIPKFHESGV-----------------LDRPKPSP 314
YA H DV+ +H+ + PS+ K H+ + LD P+
Sbjct: 224 QGQYAIPHPDVSSMHVLYFLYSLLPSLTKLHQLAMQHPPFTPLGQTTPGFPGLDASTPAS 283
Query: 315 EILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
+ L ++ +G +IG+ G+ I ++Q +G IK+ A G+ +R + I+G
Sbjct: 284 ---SHELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANATEGSAERQVTITG 334
>gi|449265657|gb|EMC76819.1| Poly(rC)-binding protein 3 [Columba livia]
Length = 343
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 99/354 (27%), Positives = 157/354 (44%), Gaps = 44/354 (12%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R++ I+GP D
Sbjct: 17 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--SCPERIVTITGPT--DAIF 72
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A L+ + I ++ ++ + V RL+V ++Q G L+GKGGS I E+R+ +GA
Sbjct: 73 KAFSMIALKFEEDINASMTNSTVTSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGA 132
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDA-FPSINRPLNP 492
+++ G D +P + E V I+G +A+ + + QI + + A P +P +
Sbjct: 133 QVQVAG-DMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASA 188
Query: 493 TFL---DQV---SPFPSFIGRRELSPPGMYS---NFGPSFHKFDAVGGPPPPGSFHP--H 541
+ QV + S EL + N F F G P HP
Sbjct: 189 PIIFAGGQVRADTILASAGNHTELRLSYLTDLCLNCACCFQAFTIQGQYAIP---HPDLT 245
Query: 542 DDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDF-VGPPHRRVPVVVPRSLV 600
H M H PP P + P GFP P + +P L+
Sbjct: 246 KLHQLAMQH------PPFTP-LGQTTP----------GFPGLDATTPTSSHELTIPNDLI 288
Query: 601 PIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQA 654
I G G+ + +IRQ+S A+I I + G+ E + I+G+P AQ LI A
Sbjct: 289 GCIIGRQGSKINEIRQMSGAQIKIANATEGSAERQVTITGSPANISLAQYLINA 342
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 124/288 (43%), Gaps = 65/288 (22%)
Query: 136 SVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLV 193
+++EGS + T + KA ++ ++ E + + +T +SK LRL+V
Sbjct: 51 NISEGSCPERIVTITGPTDAIFKAFSMI---ALKFEEDINASMTNSTVTSKPPVTLRLVV 107
Query: 194 LSTQVGCLLGKGGCVIKQI------------DKLPTCALASDEVVQITGEVDTVRKALKL 241
++Q G L+GKGG IK+I D LP +++ V I+G D + + +K
Sbjct: 108 PASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN---STERAVTISGTPDAIIQCVKQ 164
Query: 242 ISHQLLDNSPRDHESIPGNPTGPSHPL--------PDHSVSSQG---------------- 277
I +L++ P+ +IP P S P+ D ++S G
Sbjct: 165 ICVVMLESPPKG-ATIPYRPKPASAPIIFAGGQVRADTILASAGNHTELRLSYLTDLCLN 223
Query: 278 -----------APYATGHRDVADIH-LPM--PPSIPKFHES-GV--LDRPKPSPEILTFR 320
YA H D+ +H L M PP P + G LD P+ +
Sbjct: 224 CACCFQAFTIQGQYAIPHPDLTKLHQLAMQHPPFTPLGQTTPGFPGLDATTPTS---SHE 280
Query: 321 LLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
L ++ +G +IG+ G+ I ++Q +G IK+ A G+ +R + I+G
Sbjct: 281 LTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANATEGSAERQVTITG 328
>gi|357479529|ref|XP_003610050.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355511105|gb|AES92247.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 431
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 154/358 (43%), Gaps = 36/358 (10%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISA 378
FRL+ +VG +IG+ G +I+ +ET I+V++A GT DR+++ISG + +S
Sbjct: 46 FRLIVPVVKVGIIIGRKGELIKKTCEETHARIRVLDAPVGTPDRIVLISGKEDLEAPLSP 105
Query: 379 PQDAVLRVQTRIARAIPDNREQTVMT-------RLLVASNQIGCLLGKGGSIIAEMRKLS 431
DA+LR+ R++ + T RLLVAS Q L+GK GS I +++ +
Sbjct: 106 AMDAILRIFKRVSGLSETDNNNTAAAGVALCSIRLLVASTQAINLIGKQGSSIKAIQENT 165
Query: 432 GAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDA--FPSINRP 489
GA IR+L D++P A +E ++ + GE V +AL + LR F D+ P +
Sbjct: 166 GAVIRVLSGDELPSYAGADERIIDLQGETLKVLKALEAVVGHLR-KFLVDSSVIPLFEKT 224
Query: 490 LNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMH 549
N T + Q ++ + P +YS PS V P D S
Sbjct: 225 CNAT-ISQDRQTDAWADK-----PSLYSASQPSI-----VADIPTKRDSFFADRESQLDS 273
Query: 550 HIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGED-- 607
+ M + D F V V+ +P+ ED
Sbjct: 274 LLSSSTMSLYGQDSSSISGLRSSA---------FNRASASIVTTVIQTMQIPLSYAEDII 324
Query: 608 ---GACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSETET 662
G + IR+ S A +T+ + + E ++ I GT Q AQ LIQ + + ET
Sbjct: 325 GIQGTNIDYIRRTSGAILTVQESRV-PDEIIVEIKGTSTQVQTAQQLIQEVITNHNET 381
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 106/252 (42%), Gaps = 77/252 (30%)
Query: 20 PNGKEKSQKL------AGDYSENQPSKSFPGG---IMFRVLCPVSKIDGVIGKDGEMMSQ 70
PNG +S+ A E++ K +PG +FR++ PV K+ +IG+ GE++ +
Sbjct: 9 PNGTLQSESYTIFDAAANPTDESESEKRWPGWPGHCVFRLIVPVVKVGIIIGRKGELIKK 68
Query: 71 ISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASVADESD 130
++T IRV + G+ +R+V+I E+LEA +
Sbjct: 69 TCEETHARIRVLDAPVGTPDRIVLISG-------KEDLEAPL------------------ 103
Query: 131 NKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVL- 189
S A+L +F+R+ + ET D NT ++ L
Sbjct: 104 -----------------------SPAMDAILRIFKRVSGLS-ET---DNNNTAAAGVALC 136
Query: 190 --RLLVLSTQVGCLLGKGGCVIKQI-------------DKLPTCALASDEVVQITGEVDT 234
RLLV STQ L+GK G IK I D+LP+ A A + ++ + GE
Sbjct: 137 SIRLLVASTQAINLIGKQGSSIKAIQENTGAVIRVLSGDELPSYAGADERIIDLQGETLK 196
Query: 235 VRKALKLISHQL 246
V KAL+ + L
Sbjct: 197 VLKALEAVVGHL 208
>gi|432906521|ref|XP_004077571.1| PREDICTED: poly(rC)-binding protein 3-like [Oryzias latipes]
Length = 434
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 146/359 (40%), Gaps = 82/359 (22%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E S +R++ I+GP
Sbjct: 17 LTLRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGSS--PERIVTITGPT------ 68
Query: 377 SAPQDAVLRVQTRIAR-------AIPDNREQT----VMTRLLVASNQIGCLLGKGGSIIA 425
+ + R + IA+ A N T V RL+ +Q G L+GKGGS I
Sbjct: 69 ----EGIFRAFSMIAQKFEEDITAAMTNSNVTSKPPVTLRLVFPGSQCGSLIGKGGSKIK 124
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPS 485
E+R+ +GA +++ G D +P E V I+G +A+ + + I + + + A
Sbjct: 125 EIRETTGAQVQVAG-DMLPD---STERAVTISGTPQAITQCVRHICSVMLESPPKGA--- 177
Query: 486 INRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGP--SFHKFDAVGGPPPPGSF-HPHD 542
P P L P G ++ P S H F PG + H
Sbjct: 178 -TIPYRPKIL----------------PAGAHAVLAPQHSAHAFAI------PGQYAFAHQ 214
Query: 543 D----HSAFMHHIHRPGM---PPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVV 595
D H M HI P + P P + E+ +
Sbjct: 215 DLTKLHQLAMQHIPLPSLGQSNPTFPGLDSSASTSTQELA-------------------I 255
Query: 596 PRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQA 654
P L+ I G G+ + +IRQ+S A I I G+ + I+G+P AQ LI A
Sbjct: 256 PNDLIGCIIGRQGSKINEIRQVSGAHIKIASATDGSAVRQVTITGSPASISIAQYLINA 314
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 95/211 (45%), Gaps = 44/211 (20%)
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQI------------DKLPTCALASDEVVQITGEVDTVR 236
LRL+ +Q G L+GKGG IK+I D LP +++ V I+G +
Sbjct: 103 LRLVFPGSQCGSLIGKGGSKIKEIRETTGAQVQVAGDMLPD---STERAVTISGTPQAIT 159
Query: 237 KALKLISHQLLDNSPRDHESIPGNPT---GPSHPL--PDHSVSSQGAP--YATGHRDVAD 289
+ ++ I +L++ P+ +IP P +H + P HS + P YA H+D+
Sbjct: 160 QCVRHICSVMLESPPKG-ATIPYRPKILPAGAHAVLAPQHSAHAFAIPGQYAFAHQDLTK 218
Query: 290 I------HLPMP------PSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGA 337
+ H+P+P P+ P S T L ++ +G +IG+ G+
Sbjct: 219 LHQLAMQHIPLPSLGQSNPTFPGLDSSASTS---------TQELAIPNDLIGCIIGRQGS 269
Query: 338 IIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
I ++Q +G IK+ A G+ R + I+G
Sbjct: 270 KINEIRQVSGAHIKIASATDGSAVRQVTITG 300
>gi|193083112|ref|NP_001122385.1| poly(rC)-binding protein 2 isoform f [Homo sapiens]
gi|66911068|gb|AAH97410.1| Pcbp2 protein [Rattus norvegicus]
gi|78395095|gb|AAI07689.1| PCBP2 protein [Homo sapiens]
gi|417399138|gb|JAA46599.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 335
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 158/358 (44%), Gaps = 56/358 (15%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTNAIFKA 71
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I+ ++ ++ + V RL+V ++Q G L+GKGG I E+R+ +GA
Sbjct: 72 FA--MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPT 493
+++ G D +P + E + I G +++ E + QI + + + P P
Sbjct: 130 QVQVAG-DMLP---NSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPK 185
Query: 494 FLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHR 553
SP F G + + G Y+ P K H M H
Sbjct: 186 --PSSSPVI-FAGGQAYTIQGQYAIPQPDLTKL-----------------HQLAMQQSHF 225
Query: 554 P---------GMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVP--VVVPRSLVPI 602
P G+ P++K G+ + + + +P L+
Sbjct: 226 PMTHGNTGFSGIESSSPEVK--------------GYWAGLDASAQTTSHELTIPNDLIGC 271
Query: 603 IQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSET 660
I G GA + +IRQ+S A+I I +P G+T+ + I+G+ AQ LI + SET
Sbjct: 272 IIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVRLSSET 329
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 112/251 (44%), Gaps = 37/251 (14%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T +S+ LRL+V ++Q G L+GKGGC IK
Sbjct: 65 TNAIFKAFAMIIDKL---EEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIP 258
+I D LP + + I + K + ++ + L SP +IP
Sbjct: 122 EIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIP 181
Query: 259 GNPTGPSHPL---PDHSVSSQGAPYATGHRDVADIH-LPMPPS-IPKFH-ESGVLDRPKP 312
P S P+ + + QG YA D+ +H L M S P H +G
Sbjct: 182 YRPKPSSSPVIFAGGQAYTIQGQ-YAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESS 240
Query: 313 SPEILTF-------------RLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGT 359
SPE+ + L ++ +G +IG+ GA I ++Q +G IK+ V G+
Sbjct: 241 SPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGS 300
Query: 360 EDRLIVISGPA 370
DR + I+G A
Sbjct: 301 TDRQVTITGSA 311
>gi|291327528|ref|NP_001167544.1| poly(rC)-binding protein 2 isoform 4 [Mus musculus]
gi|348581081|ref|XP_003476306.1| PREDICTED: poly(rC)-binding protein 2 isoform 4 [Cavia porcellus]
gi|74149644|dbj|BAE36444.1| unnamed protein product [Mus musculus]
gi|194378584|dbj|BAG63457.1| unnamed protein product [Homo sapiens]
gi|417398924|gb|JAA46495.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 322
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 153/349 (43%), Gaps = 51/349 (14%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTNAIFKA 71
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I+ ++ ++ + V RL+V ++Q G L+GKGG I E+R+ +GA
Sbjct: 72 FAM--IIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPT 493
+++ G D +P + E + I G +++ E + QI + + + P P
Sbjct: 130 QVQVAG-DMLP---NSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPK 185
Query: 494 FLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHR 553
SP F G + + G Y+ P K H M H
Sbjct: 186 --PSSSPVI-FAGGQAYTIQGQYAIPQPDLTKL-----------------HQLAMQQSHF 225
Query: 554 PGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVP--VVVPRSLVPIIQGEDGACL 611
P G GF + + + +P L+ I G GA +
Sbjct: 226 P------------------MTHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKI 267
Query: 612 KQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSET 660
+IRQ+S A+I I +P G+T+ + I+G+ AQ LI + SET
Sbjct: 268 NEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVRLSSET 316
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 110/238 (46%), Gaps = 24/238 (10%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T +S+ LRL+V ++Q G L+GKGGC IK
Sbjct: 65 TNAIFKAFAMIIDKL---EEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIP 258
+I D LP + + I + K + ++ + L SP +IP
Sbjct: 122 EIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIP 181
Query: 259 GNPTGPSHPL---PDHSVSSQGAPYATGHRDVADIH-LPMPPS-IPKFH-ESGVLDRPKP 312
P S P+ + + QG YA D+ +H L M S P H +G
Sbjct: 182 YRPKPSSSPVIFAGGQAYTIQGQ-YAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSAGLDA 240
Query: 313 SPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPA 370
S + + L ++ +G +IG+ GA I ++Q +G IK+ V G+ DR + I+G A
Sbjct: 241 SAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSA 298
>gi|147807331|emb|CAN73002.1| hypothetical protein VITISV_044056 [Vitis vinifera]
Length = 1121
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 91/161 (56%), Gaps = 4/161 (2%)
Query: 318 TFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRIS 377
FR+L ++VG +IG+ G I+ L +ET IK+++ GT +R +++S PD I+
Sbjct: 41 VFRMLIPVQKVGYIIGRKGEHIKKLSEETKARIKILDGPPGTSERAVMVSAKEEPDAPIA 100
Query: 378 APQDAVLRVQTRIARA---IPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAY 434
D +LRV I +P V TRLLV + Q G L+GK G+ I +++ S
Sbjct: 101 PAIDGLLRVHKCIMDVESDVPSAAGVMVSTRLLVVAAQAGSLIGKQGATIKSIQEASNCI 160
Query: 435 IRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLR 475
+R+LG++ +P A +N+ VV I GE +V +A+ I + LR
Sbjct: 161 VRVLGEN-LPLFALQNDTVVEIQGEPASVHKAVELIASNLR 200
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 96/217 (44%), Gaps = 65/217 (29%)
Query: 42 FPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNK 101
+PG +FR+L PV K+ +IG+ GE + ++S++T I++ + G+ ER V++ A K
Sbjct: 36 WPGENVFRMLIPVQKVGYIIGRKGEHIKKLSEETKARIKILDGPPGTSERAVMVSA---K 92
Query: 102 KETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALL 161
+E + +I DGL +V K ++
Sbjct: 93 EEPDAPIAPAI--------------------------------DGL------LRVHKCIM 114
Query: 162 LVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI--------- 212
V E++V S RLLV++ Q G L+GK G IK I
Sbjct: 115 DV---------ESDVPSAAGVMVST---RLLVVAAQAGSLIGKQGATIKSIQEASNCIVR 162
Query: 213 ---DKLPTCALASDEVVQITGEVDTVRKALKLISHQL 246
+ LP AL +D VV+I GE +V KA++LI+ L
Sbjct: 163 VLGENLPLFALQNDTVVEIQGEPASVHKAVELIASNL 199
>gi|301604860|ref|XP_002932078.1| PREDICTED: poly(rC)-binding protein 3-like [Xenopus (Silurana)
tropicalis]
Length = 339
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 153/360 (42%), Gaps = 58/360 (16%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R++ I+GP D
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT--DAIF 69
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + + I ++ ++ + V RL+V ++Q G L+GKGGS I E+R+ +GA
Sbjct: 70 KAFAMIAYKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDA-FPSINRPLNP 492
+++ G D +P + E V I+G +A+ + + QI + + A P +P +
Sbjct: 130 QVQVAG-DMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASA 185
Query: 493 TFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIH 552
+ F G + S G Y+ PH D +H +
Sbjct: 186 PVI--------FAGGQAYSIQGQYA---------------------IPHPDQLTKLHQLA 216
Query: 553 RPGMP--------PHMPDMK-----PWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSL 599
P P P K Q LM M H + +P L
Sbjct: 217 MQQTPFTPLGQTTPAFPGEKLPLHSSEEAQNLMGQSAGMDASSQAS-THE---LTIPNDL 272
Query: 600 VPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
+ I G G + +IRQ+S A+I I G+ E I I+G+P AQ LI A + SE
Sbjct: 273 IGCIIGRQGTKINEIRQMSGAQIKIASAMEGSAERQITITGSPANISLAQYLINARLTSE 332
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 104/229 (45%), Gaps = 46/229 (20%)
Query: 181 NTKSSK--FVLRLLVLSTQVGCLLGKGGCVIKQI------------DKLPTCALASDEVV 226
+T +SK LRL+V ++Q G L+GKGG IK+I D LP +++ V
Sbjct: 90 STATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN---STERAV 146
Query: 227 QITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPL---PDHSVSSQGAPYATG 283
I+G D + + +K I +L++ P+ +IP P S P+ + S QG YA
Sbjct: 147 TISGTPDAIIQCVKQICVVMLESPPKG-ATIPYRPKPASAPVIFAGGQAYSIQGQ-YAIP 204
Query: 284 HRD-VADIH---------LPMPPSIPKF-------HES-------GVLDRPKPSPEILTF 319
H D + +H P+ + P F H S G S + T
Sbjct: 205 HPDQLTKLHQLAMQQTPFTPLGQTTPAFPGEKLPLHSSEEAQNLMGQSAGMDASSQASTH 264
Query: 320 RLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
L ++ +G +IG+ G I ++Q +G IK+ A+ G+ +R I I+G
Sbjct: 265 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIASAMEGSAERQITITG 313
>gi|219888687|gb|ACL54718.1| unknown [Zea mays]
Length = 448
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 97/361 (26%), Positives = 156/361 (43%), Gaps = 52/361 (14%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISA 378
FRL+ +VG +IG+ G +I+ L +ET ++++E G +R++++SG PD +
Sbjct: 48 FRLVVPVLKVGSIIGRKGELIKRLVEETKARVRILEGPVGATERIVLVSGKEDPDLELPP 107
Query: 379 PQDAVLRVQTRI------------ARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAE 426
DA++RV R+ A A PD RLLV Q L+GK G+ I
Sbjct: 108 AMDALMRVFKRVTGITDGAAEGTQAAATPD----VCAARLLVPGAQAINLIGKQGATIKA 163
Query: 427 MRKLSGAYIRILGKD--QIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFP 484
+++ + A IR++ D + P +++E +V I G+ E V +AL ++ LR +
Sbjct: 164 IQESTSATIRVISVDEHERPFYVTDDERIVEIQGDTEKVLKALQAVSNHLRKFLVDHSVL 223
Query: 485 SINRPLNPTFLDQVSPFPSFIGRRELSPPGMYS---NFGPSFHKFDAVGGPPPPGSFHPH 541
+ N T VS + G ++S P + S N PS + P
Sbjct: 224 PLFEKTNTT----VSQDRNGDGWSDMSRPSIGSAQVNQLPSVLDDYILQVKRDPLYL--- 276
Query: 542 DDHSAFMHHIHRPGMP-----PHMPDMKPWGPQG----LMEVGGPMGFPDFVGPPHRRVP 592
+ S H+IHR G+ P + ++P G L ++ M
Sbjct: 277 ERESLVDHNIHRSGVSLYGRDPALSTLRPSAVHGAGSLLTQITQTMQ------------- 323
Query: 593 VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLI 652
+P + I G GA + IR S A +TI + + + I GT Q AAQ LI
Sbjct: 324 --IPLTYAEDIIGVKGANIAYIRANSGAVVTIQESLGSPDDITVEIKGTSSQVQAAQQLI 381
Query: 653 Q 653
Q
Sbjct: 382 Q 382
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 88/220 (40%), Gaps = 63/220 (28%)
Query: 42 FPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNK 101
+PG +FR++ PV K+ +IG+ GE++ ++ ++T +R+ E G+ ER+V++
Sbjct: 42 WPGDSVFRLVVPVLKVGSIIGRKGELIKRLVEETKARVRILEGPVGATERIVLVSG---- 97
Query: 102 KETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALL 161
KED E MD AL+
Sbjct: 98 -------------------------------KEDPDLELPPAMD-------------ALM 113
Query: 162 LVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKLPTC--- 218
VF+R+ + Q RLLV Q L+GK G IK I + +
Sbjct: 114 RVFKRVTGITDGAAEGTQAAATPDVCAARLLVPGAQAINLIGKQGATIKAIQESTSATIR 173
Query: 219 ALASDE------------VVQITGEVDTVRKALKLISHQL 246
++ DE +V+I G+ + V KAL+ +S+ L
Sbjct: 174 VISVDEHERPFYVTDDERIVEIQGDTEKVLKALQAVSNHL 213
>gi|61557337|ref|NP_001013241.1| poly(rC)-binding protein 2 [Rattus norvegicus]
gi|193083108|ref|NP_001122383.1| poly(rC)-binding protein 2 isoform d [Homo sapiens]
gi|6707736|sp|Q15366.1|PCBP2_HUMAN RecName: Full=Poly(rC)-binding protein 2; AltName: Full=Alpha-CP2;
AltName: Full=Heterogeneous nuclear ribonucleoprotein
E2; Short=hnRNP E2
gi|460773|emb|CAA55015.1| hnRNP-E2 [Homo sapiens]
gi|50926841|gb|AAH78906.1| Poly(rC) binding protein 2 [Rattus norvegicus]
gi|119617116|gb|EAW96710.1| poly(rC) binding protein 2, isoform CRA_e [Homo sapiens]
Length = 365
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 165/370 (44%), Gaps = 50/370 (13%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTNAIFKA 71
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I+ ++ ++ + V RL+V ++Q G L+GKGG I E+R+ +GA
Sbjct: 72 FA--MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPT 493
+++ G D +P + E + I G +++ E + QI + + + P P
Sbjct: 130 QVQVAG-DMLP---NSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPK 185
Query: 494 FLDQVSPFPSFIGRRELSPPGMYSNF---GPSFHKFDAVGGPP-----PPGSFH-PHDD- 543
SP G+ S ++F PS + GPP G + P D
Sbjct: 186 --PSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDL 243
Query: 544 ---HSAFMHHIHRP---------GMPPHMPDMKP-WGPQGLMEVGGPMGFPDFVGPPHRR 590
H M H P G+ P++K WG + H
Sbjct: 244 TKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWGLDASAQT-----------TSHE- 291
Query: 591 VPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQS 650
+ +P L+ I G GA + +IRQ+S A+I I +P G+T+ + I+G+ AQ
Sbjct: 292 --LTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQY 349
Query: 651 LIQAFVMSET 660
LI + SET
Sbjct: 350 LINVRLSSET 359
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 113/281 (40%), Gaps = 67/281 (23%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T +S+ LRL+V ++Q G L+GKGGC IK
Sbjct: 65 TNAIFKAFAMIIDKL---EEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIP 258
+I D LP + + I + K + ++ + L SP +IP
Sbjct: 122 EIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIP 181
Query: 259 GNPTGPSHPL----------------------------------PDHSVSSQGAPYATGH 284
P S P+ P + + QG YA
Sbjct: 182 YRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQ-YAIPQ 240
Query: 285 RDVADIH-LPMPPS-IPKFH-ESGVLDRPKPSPEILTF------------RLLCHDERVG 329
D+ +H L M S P H +G SPE+ + L ++ +G
Sbjct: 241 PDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWGLDASAQTTSHELTIPNDLIG 300
Query: 330 GVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPA 370
+IG+ GA I ++Q +G IK+ V G+ DR + I+G A
Sbjct: 301 CIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSA 341
>gi|414867775|tpg|DAA46332.1| TPA: nucleic acid binding protein [Zea mays]
Length = 448
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 97/361 (26%), Positives = 156/361 (43%), Gaps = 52/361 (14%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISA 378
FRL+ +VG +IG+ G +I+ L +ET ++++E G +R++++SG PD +
Sbjct: 48 FRLVVPVLKVGSIIGRKGELIKRLVEETKARVRILEGPVGATERIVLVSGKEDPDLELPP 107
Query: 379 PQDAVLRVQTRI------------ARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAE 426
DA++RV R+ A A PD RLLV Q L+GK G+ I
Sbjct: 108 AMDALMRVFKRVTGITDGAAEGTQAAATPD----VCAARLLVPGAQAINLIGKQGATIKA 163
Query: 427 MRKLSGAYIRILGKD--QIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFP 484
+++ + A IR++ D + P +++E +V I G+ E V +AL ++ LR +
Sbjct: 164 IQESTSATIRVISVDEHERPFYVTDDERIVEIQGDTEKVLKALQAVSNHLRKFLVDHSVL 223
Query: 485 SINRPLNPTFLDQVSPFPSFIGRRELSPPGMYS---NFGPSFHKFDAVGGPPPPGSFHPH 541
+ N T VS + G ++S P + S N PS + P
Sbjct: 224 PLFEKTNTT----VSQDRNGDGWSDMSRPSIGSAQVNQLPSVLDDYILQVKRDPLYL--- 276
Query: 542 DDHSAFMHHIHRPGMP-----PHMPDMKPWGPQG----LMEVGGPMGFPDFVGPPHRRVP 592
+ S H+IHR G+ P + ++P G L ++ M
Sbjct: 277 ERESLVDHNIHRSGVSLYGRDPALSTLRPSAVHGAGSLLTQITQTMQ------------- 323
Query: 593 VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLI 652
+P + I G GA + IR S A +TI + + + I GT Q AAQ LI
Sbjct: 324 --IPLTYAEDIIGVKGANIAYIRANSGAVVTIQESLGSPDDITVEIKGTSSQVQAAQQLI 381
Query: 653 Q 653
Q
Sbjct: 382 Q 382
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 88/220 (40%), Gaps = 63/220 (28%)
Query: 42 FPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNK 101
+PG +FR++ PV K+ +IG+ GE++ ++ ++T +R+ E G+ ER+V++
Sbjct: 42 WPGDSVFRLVVPVLKVGSIIGRKGELIKRLVEETKARVRILEGPVGATERIVLVSG---- 97
Query: 102 KETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALL 161
KED E MD AL+
Sbjct: 98 -------------------------------KEDPDLELPPAMD-------------ALM 113
Query: 162 LVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKLPTC--- 218
VF+R+ + Q RLLV Q L+GK G IK I + +
Sbjct: 114 RVFKRVTGITDGAAEGTQAAATPDVCAARLLVPGAQAINLIGKQGATIKAIQESTSATIR 173
Query: 219 ALASDE------------VVQITGEVDTVRKALKLISHQL 246
++ DE +V+I G+ + V KAL+ +S+ L
Sbjct: 174 VISVDEHERPFYVTDDERIVEIQGDTEKVLKALQAVSNHL 213
>gi|242040159|ref|XP_002467474.1| hypothetical protein SORBIDRAFT_01g028800 [Sorghum bicolor]
gi|241921328|gb|EER94472.1| hypothetical protein SORBIDRAFT_01g028800 [Sorghum bicolor]
Length = 452
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 157/361 (43%), Gaps = 52/361 (14%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISA 378
FRL+ +VG +IG+ G +I+ L +ET ++++E G +R++++SG P +
Sbjct: 52 FRLVVPVLKVGSIIGRKGELIKRLVEETKARVRILEGPVGATERIVLVSGKEDPGLELPP 111
Query: 379 PQDAVLRVQTRIARAIPDNREQT--------VMTRLLVASNQIGCLLGKGGSIIAEMRKL 430
DA++RV R+ E T RLLV Q L+GK G+ I +++
Sbjct: 112 AMDALMRVFKRVIGITDGAAEGTQAAATPGVCAARLLVPGAQAINLIGKQGATIKAIQES 171
Query: 431 SGAYIRILGKD--QIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINR 488
+GA IR++ D + P +++E ++ I G+ E V +AL ++ LR + +
Sbjct: 172 TGATIRVISVDERERPFYVTDDERIIEIQGDTEKVLKALQAVSNHLRKFLVDHSVLPLFE 231
Query: 489 PLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFH--PHDDHSA 546
N T VS + G ++S P + S V PP + P S
Sbjct: 232 KTNTT----VSQDRNGDGWSDMSHPSIGSA---------QVNQPPSVVDEYILPVKRESL 278
Query: 547 FM-------HHIHRPGMP-----PHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRV--P 592
++ H+IHR G+ P + ++P G G GP ++
Sbjct: 279 YLEREPLVDHNIHRSGVSLYGRDPALSTLRPSGIHG-------------AGPLLTQITQT 325
Query: 593 VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLI 652
+ +P + I G GA + IR S A +TI + + + I GT Q AAQ LI
Sbjct: 326 MQIPLTYAEDIIGVKGANIAYIRANSGAVVTIQESLGSPDDITVEIKGTSSQVQAAQQLI 385
Query: 653 Q 653
Q
Sbjct: 386 Q 386
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 86/220 (39%), Gaps = 63/220 (28%)
Query: 42 FPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNK 101
+PG +FR++ PV K+ +IG+ GE++ ++ ++T +R+ E G+ ER+V++
Sbjct: 46 WPGDSVFRLVVPVLKVGSIIGRKGELIKRLVEETKARVRILEGPVGATERIVLVSG---- 101
Query: 102 KETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALL 161
KED E MD AL+
Sbjct: 102 -------------------------------KEDPGLELPPAMD-------------ALM 117
Query: 162 LVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQID-------- 213
VF+R++ + Q RLLV Q L+GK G IK I
Sbjct: 118 RVFKRVIGITDGAAEGTQAAATPGVCAARLLVPGAQAINLIGKQGATIKAIQESTGATIR 177
Query: 214 -------KLPTCALASDEVVQITGEVDTVRKALKLISHQL 246
+ P + +++I G+ + V KAL+ +S+ L
Sbjct: 178 VISVDERERPFYVTDDERIIEIQGDTEKVLKALQAVSNHL 217
>gi|413955216|gb|AFW87865.1| nucleic acid binding protein [Zea mays]
Length = 441
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 158/360 (43%), Gaps = 51/360 (14%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISA 378
FRL+ +VG +IG+ G +I+ L + T ++++E G +R++++SG P +S
Sbjct: 42 FRLVVPVLKVGSIIGRKGELIKRLVEGTKARVRILEGPVGATERIVLVSGKEDPGLELSP 101
Query: 379 PQDAVLRVQTRIARAIPDNREQT--------VMTRLLVASNQIGCLLGKGGSIIAEMRKL 430
DA++RV R+ E T RLLV Q L+GK G+ I +++
Sbjct: 102 AMDALMRVFKRVIGITDGAAEGTQAAATPGVCAARLLVPGAQAINLIGKQGATIKAIQES 161
Query: 431 SGAYIRILGKD--QIPKCASENEEVVLINGEFEAVQEALFQITTRLRHH--------FFR 480
+GA IR++ D + P +++E +V I G+ E V +AL ++ LR F
Sbjct: 162 TGATIRVISVDEHERPFYVTDDERIVEIQGDTEKVLKALQAVSNHLRKFLVDHSVLPLFE 221
Query: 481 DAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHP 540
++++ N + D P IG +++ P PS D P + +
Sbjct: 222 KTNTAVSQDHNVGWSDMSHP---SIGSAQVNQP-------PSV--VDEYILPVKRDTLY- 268
Query: 541 HDDHSAFMHHIHRPGMP-----PHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRV--PV 593
+ + H+IHR G+ P + ++P G G GP ++ +
Sbjct: 269 LERETLLDHNIHRSGVSLYGRDPALSTLRPPGIHG-------------AGPLLTQITQTM 315
Query: 594 VVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQ 653
+P + I G GA + IR S A +TI + + + I GT Q AAQ LIQ
Sbjct: 316 QIPLTYAEDIIGVKGANIAYIRANSGAVVTIQESLGSPDDITVEIKGTSSQVQAAQQLIQ 375
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 102/272 (37%), Gaps = 68/272 (25%)
Query: 42 FPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNK 101
+PG +FR++ PV K+ +IG+ GE++ ++ + T +R+ E G+ ER+V++
Sbjct: 36 WPGDSVFRLVVPVLKVGSIIGRKGELIKRLVEGTKARVRILEGPVGATERIVLVSG---- 91
Query: 102 KETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALL 161
KED E S MD AL+
Sbjct: 92 -------------------------------KEDPGLELSPAMD-------------ALM 107
Query: 162 LVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQID-------- 213
VF+R++ + Q RLLV Q L+GK G IK I
Sbjct: 108 RVFKRVIGITDGAAEGTQAAATPGVCAARLLVPGAQAINLIGKQGATIKAIQESTGATIR 167
Query: 214 -------KLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSH 266
+ P + +V+I G+ + V KAL+ +S+ L DH +P +
Sbjct: 168 VISVDEHERPFYVTDDERIVEIQGDTEKVLKALQAVSNH-LRKFLVDHSVLPLFEKTNTA 226
Query: 267 PLPDHSVSSQGAPYATGHRDVADIHLPMPPSI 298
DH+V H + + PPS+
Sbjct: 227 VSQDHNVGWSD----MSHPSIGSAQVNQPPSV 254
>gi|354490197|ref|XP_003507246.1| PREDICTED: poly(rC)-binding protein 2 isoform 4 [Cricetulus
griseus]
Length = 322
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 152/349 (43%), Gaps = 51/349 (14%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTNAIFKA 71
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I+ ++ ++ + V RL+V ++Q G L+GKGG I E+R+ +GA
Sbjct: 72 FAM--IIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPT 493
+++ G D +P + E + I G +++ E + QI + + + P P
Sbjct: 130 QVQVAG-DMLP---NSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPK 185
Query: 494 FLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHR 553
SP F G + + G Y+ P K H M H
Sbjct: 186 --PSSSPVI-FAGGQAYTIQGQYAIPQPDLTKL-----------------HQLAMQQSHF 225
Query: 554 PGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVP--VVVPRSLVPIIQGEDGACL 611
P G GF + + + +P L+ I G GA +
Sbjct: 226 P------------------MTHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKI 267
Query: 612 KQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSET 660
+IRQ+S A+I +P G+T+ + I+G+ AQ LI + SET
Sbjct: 268 NEIRQMSGAQIKTANPVEGSTDRQVTITGSAASISLAQYLINVRLSSET 316
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 109/238 (45%), Gaps = 24/238 (10%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T +S+ LRL+V ++Q G L+GKGGC IK
Sbjct: 65 TNAIFKAFAMIIDKL---EEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIP 258
+I D LP + + I + K + ++ + L SP +IP
Sbjct: 122 EIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIP 181
Query: 259 GNPTGPSHPL---PDHSVSSQGAPYATGHRDVADIH-LPMPPS-IPKFH-ESGVLDRPKP 312
P S P+ + + QG YA D+ +H L M S P H +G
Sbjct: 182 YRPKPSSSPVIFAGGQAYTIQGQ-YAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSAGLDA 240
Query: 313 SPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPA 370
S + + L ++ +G +IG+ GA I ++Q +G IK V G+ DR + I+G A
Sbjct: 241 SAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKTANPVEGSTDRQVTITGSA 298
>gi|147855522|emb|CAN83854.1| hypothetical protein VITISV_031103 [Vitis vinifera]
Length = 321
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 109/190 (57%), Gaps = 12/190 (6%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
+ FR++ ++G VIGK G+ I+ +++ET IK+ +A++ E+R+I+IS ++ I
Sbjct: 60 VLFRIVVPSRQIGKVIGKEGSRIQKIREETKATIKIADAIARHEERVIIISSK-DSENVI 118
Query: 377 SAPQDAVLRVQTRIARAIPDNREQTVM---------TRLLVASNQIGCLLGKGGSIIAEM 427
S ++A+L+ + I + N + + RLL+A +Q GCL+G G I ++
Sbjct: 119 SDAENALLQXASLILKEDDSNTDALKVGVGHVVANAIRLLIAGSQAGCLIGMSGQNIEKL 178
Query: 428 RKLSGAYIRILGKDQIPKCAS--ENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPS 485
R SGA I IL ++Q+P CAS +++ +V I+G+ AV +AL +I +LR + +
Sbjct: 179 RNSSGATITILPQNQLPLCASAHDSDRMVQISGDVPAVLKALEEIGCQLRTTNLAADYVT 238
Query: 486 INRPLNPTFL 495
+N + T +
Sbjct: 239 LNMMIPETLV 248
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 115/271 (42%), Gaps = 97/271 (35%)
Query: 6 TPSKRPHDDD-------------NHTEPNGKEKSQKLAGDYSENQPSKSFPGGIMFRVLC 52
T KRP DDD +H P + K+Q ++FR++
Sbjct: 24 TSMKRPRDDDGGVIASATGEVADDHRSPKRRAKNQD-----------------VLFRIVV 66
Query: 53 PVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASI 112
P +I VIGK+G + +I ++T TI++ + ++ +ER+++I + D SEN+ I
Sbjct: 67 PSRQIGKVIGKEGSRIQKIREETKATIKIADAIARHEERVIIISSKD-----SENV---I 118
Query: 113 ERSENNGREEASVADESDNKKEDS--VNEGSVLMDGLNSEKETSKVQKALLLVFERMVEV 170
+EN + AS+ + D+ D+ V G V+ +
Sbjct: 119 SDAENALLQXASLILKEDDSNTDALKVGVGHVVANA------------------------ 154
Query: 171 EPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI-------------DKLPT 217
+RLL+ +Q GCL+G G I+++ ++LP
Sbjct: 155 ------------------IRLLIAGSQAGCLIGMSGQNIEKLRNSSGATITILPQNQLPL 196
Query: 218 CALA--SDEVVQITGEVDTVRKALKLISHQL 246
CA A SD +VQI+G+V V KAL+ I QL
Sbjct: 197 CASAHDSDRMVQISGDVPAVLKALEEIGCQL 227
Score = 39.7 bits (91), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 55/131 (41%), Gaps = 19/131 (14%)
Query: 318 TFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDR-- 375
RLL + G +IG G I L+ +G I ++ + + AH DR
Sbjct: 154 AIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATITILP------QNQLPLCASAHDSDRMV 207
Query: 376 -ISAPQDAVLRV------QTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMR 428
IS AVL+ Q R D V +++ +G L+G+ GS I+ +R
Sbjct: 208 QISGDVPAVLKALEEIGCQLRTTNLAAD----YVTLNMMIPETLVGGLIGRCGSNISRIR 263
Query: 429 KLSGAYIRILG 439
SGA I++ G
Sbjct: 264 NESGAMIKVYG 274
>gi|417398902|gb|JAA46484.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 320
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 153/347 (44%), Gaps = 50/347 (14%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTNAIFKA 71
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I+ ++ ++ + V RL+V ++Q G L+GKGG I E+R+ +GA
Sbjct: 72 FA--MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPT 493
+++ G D +P + E + I G +++ E + QI + + + P P
Sbjct: 130 QVQVAG-DMLP---NSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPK 185
Query: 494 FLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHR 553
SP F G + + G Y+ P K H M H
Sbjct: 186 --PSSSPVI-FAGGQAYTIQGQYAIPQPDLTKL-----------------HQLAMQQSHF 225
Query: 554 PGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRV-PVVVPRSLVPIIQGEDGACLK 612
P G GF + + + +P +L+ I G GA +
Sbjct: 226 P------------------MTHGNTGFSASLDASTQTTHELTIPNNLIGCIIGRQGANIN 267
Query: 613 QIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
+IRQ+S A+I I +P G++ + I+G+ AQ LI A + SE
Sbjct: 268 EIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLINARLSSE 314
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 106/237 (44%), Gaps = 23/237 (9%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T +S+ LRL+V ++Q G L+GKGGC IK
Sbjct: 65 TNAIFKAFAMIIDKL---EEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIP 258
+I D LP + + I + K + ++ + L SP +IP
Sbjct: 122 EIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIP 181
Query: 259 GNPTGPSHPL---PDHSVSSQGAPYATGHRDVADIH-LPMPPS-IPKFHESGVLDRPKPS 313
P S P+ + + QG YA D+ +H L M S P H + +
Sbjct: 182 YRPKPSSSPVIFAGGQAYTIQGQ-YAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSASLDA 240
Query: 314 PEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPA 370
T L + +G +IG+ GA I ++Q +G IK+ V G+ R + I+G A
Sbjct: 241 STQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSA 297
>gi|297262518|ref|XP_001105618.2| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Macaca mulatta]
Length = 335
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 157/358 (43%), Gaps = 56/358 (15%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTNAIFKA 71
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ + ++ ++ + V RL+V ++Q G L+GKGG I E+R+ +GA
Sbjct: 72 FA--MIIDKLEEVFSSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPT 493
+++ G D +P + E + I G +++ E + QI + + + P P
Sbjct: 130 QVQVAG-DMLP---NSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPK 185
Query: 494 FLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHR 553
SP F G + + G Y+ P K H M H
Sbjct: 186 --PSSSPVI-FAGGQAYTIQGQYAIPQPDLTKL-----------------HQLAMQQSHF 225
Query: 554 P---------GMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVP--VVVPRSLVPI 602
P G+ P++K G+ + + + +P L+
Sbjct: 226 PMTHGNTGFSGIESSSPEVK--------------GYWAGLDASAQTTSHELTIPNDLIGC 271
Query: 603 IQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSET 660
I G GA + +IRQ+S A+I I +P G+T+ + I+G+ AQ LI + SET
Sbjct: 272 IIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVRLSSET 329
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 112/251 (44%), Gaps = 37/251 (14%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ EV + +T +S+ LRL+V ++Q G L+GKGGC IK
Sbjct: 65 TNAIFKAFAMIIDKLEEVFSSSMT---NSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIP 258
+I D LP + + I + K + ++ + L SP +IP
Sbjct: 122 EIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIP 181
Query: 259 GNPTGPSHPL---PDHSVSSQGAPYATGHRDVADIH-LPMPPS-IPKFH-ESGVLDRPKP 312
P S P+ + + QG YA D+ +H L M S P H +G
Sbjct: 182 YRPKPSSSPVIFAGGQAYTIQGQ-YAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESS 240
Query: 313 SPEILTF-------------RLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGT 359
SPE+ + L ++ +G +IG+ GA I ++Q +G IK+ V G+
Sbjct: 241 SPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGS 300
Query: 360 EDRLIVISGPA 370
DR + I+G A
Sbjct: 301 TDRQVTITGSA 311
>gi|226497902|ref|NP_001151605.1| nucleic acid binding protein [Zea mays]
gi|195648058|gb|ACG43497.1| nucleic acid binding protein [Zea mays]
Length = 524
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 89/164 (54%), Gaps = 9/164 (5%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISA 378
FR+L ++VG +IG+ G I+ + +ET IK+++ G +R ++IS PD +S
Sbjct: 123 FRILVPAQKVGAIIGRKGEFIKKMCEETKARIKILDGPPGVPERAVMISAKDEPDAPLSP 182
Query: 379 PQDAVLRVQTRIARAIPDNREQTVM-------TRLLVASNQIGCLLGKGGSIIAEMRKLS 431
D +LRV RI + Q TRLLV S+Q G L+GK G+ I ++ S
Sbjct: 183 AMDGLLRVHKRITDSSDGESSQPQRSAGNIGPTRLLVPSSQAGSLIGKQGATIKSIQDSS 242
Query: 432 GAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLR 475
+ +RI+ + +P A ++ VV I GE VQ+A+ I++ LR
Sbjct: 243 KSIVRIV--ENVPPVALNDDRVVEIQGEPLGVQKAVELISSHLR 284
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 93/216 (43%), Gaps = 60/216 (27%)
Query: 42 FPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNK 101
+PG +FR+L P K+ +IG+ GE + ++ ++T I++ + G ER V+I A D
Sbjct: 117 WPGESVFRILVPAQKVGAIIGRKGEFIKKMCEETKARIKILDGPPGVPERAVMISAKDEP 176
Query: 102 KETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALL 161
+A + S MDGL L
Sbjct: 177 -------DAPL----------------------------SPAMDGL-------------L 188
Query: 162 LVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI--------- 212
V +R+ + + E + + + + RLLV S+Q G L+GK G IK I
Sbjct: 189 RVHKRITDSS-DGESSQPQRSAGNIGPTRLLVPSSQAGSLIGKQGATIKSIQDSSKSIVR 247
Query: 213 --DKLPTCALASDEVVQITGEVDTVRKALKLISHQL 246
+ +P AL D VV+I GE V+KA++LIS L
Sbjct: 248 IVENVPPVALNDDRVVEIQGEPLGVQKAVELISSHL 283
>gi|417410186|gb|JAA51570.1| Putative polyc-binding alphacp-1, partial [Desmodus rotundus]
Length = 376
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 163/368 (44%), Gaps = 48/368 (13%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 26 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTNAIFKA 83
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I+ ++ ++ + V RL+V ++Q G L+GKGG I E+R+ +GA
Sbjct: 84 FA--MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 141
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPT 493
+++ G D +P + E + I G +++ E + QI + + + P P
Sbjct: 142 QVQVAG-DMLP---NSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPK 197
Query: 494 FLDQVSPFPSFIGRRELSPPGMYSNF---GPSFHKFDAVGGPPP-----PGSFH-PHDD- 543
SP G+ S ++F PS + GPP G + P D
Sbjct: 198 --PSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDL 255
Query: 544 ---HSAFMHHIHRP---------GMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRV 591
H M H P G+ P++K + +
Sbjct: 256 TKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGY-------------WASLDASTQTTH 302
Query: 592 PVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSL 651
+ +P +L+ I G GA + +IRQ+S A+I I +P G++ + I+G+ AQ L
Sbjct: 303 ELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYL 362
Query: 652 IQAFVMSE 659
I A + SE
Sbjct: 363 INARLSSE 370
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 111/281 (39%), Gaps = 67/281 (23%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T +S+ LRL+V ++Q G L+GKGGC IK
Sbjct: 77 TNAIFKAFAMIIDKL---EEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 133
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIP 258
+I D LP + + I + K + ++ + L SP +IP
Sbjct: 134 EIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIP 193
Query: 259 GNPTGPSHPL----------------------------------PDHSVSSQGAPYATGH 284
P S P+ P + + QG YA
Sbjct: 194 YRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQ-YAIPQ 252
Query: 285 RDVADIH-LPMPPS-IPKFH-ESGVLDRPKPSPEI------------LTFRLLCHDERVG 329
D+ +H L M S P H +G SPE+ T L + +G
Sbjct: 253 PDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWASLDASTQTTHELTIPNNLIG 312
Query: 330 GVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPA 370
+IG+ GA I ++Q +G IK+ V G+ R + I+G A
Sbjct: 313 CIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSA 353
>gi|347300276|ref|NP_001231441.1| poly(rC) binding protein 2 [Sus scrofa]
gi|417399505|gb|JAA46755.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 353
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 161/359 (44%), Gaps = 40/359 (11%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTNAIFKA 71
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I+ ++ ++ + V RL+V ++Q G L+GKGG I E+R+ +GA
Sbjct: 72 FA--MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPT 493
+++ G D +P + E + I G +++ E + QI + + + P P
Sbjct: 130 QVQVAG-DMLP---NSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPK 185
Query: 494 FLDQVSPFPSFIGRRELSPPGMYSNF---GPSFHKFDAVGGPPPPGSFHPHDDHSAF--- 547
SP G+ S ++F PS + GPP + +
Sbjct: 186 --PSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPP----LEAYTIQGQYAIP 239
Query: 548 ---MHHIHRPGM-PPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVP--VVVPRSLVP 601
+ +H+ M H P G GF + + + +P L+
Sbjct: 240 QPDLTKLHQLAMQQSHFPMTH-----------GNTGFSAGLDASAQTTSHELTIPNDLIG 288
Query: 602 IIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSET 660
I G GA + +IRQ+S A+I I +P G+T+ + I+G+ AQ LI + SET
Sbjct: 289 CIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVRLSSET 347
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 111/269 (41%), Gaps = 55/269 (20%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T +S+ LRL+V ++Q G L+GKGGC IK
Sbjct: 65 TNAIFKAFAMIIDKL---EEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIP 258
+I D LP + + I + K + ++ + L SP +IP
Sbjct: 122 EIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIP 181
Query: 259 GNPTGPSHPL----------------------------------PDHSVSSQGAPYATGH 284
P S P+ P + + QG YA
Sbjct: 182 YRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQ-YAIPQ 240
Query: 285 RDVADIH-LPMPPS-IPKFH-ESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRS 341
D+ +H L M S P H +G S + + L ++ +G +IG+ GA I
Sbjct: 241 PDLTKLHQLAMQQSHFPMTHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINE 300
Query: 342 LKQETGCDIKVMEAVSGTEDRLIVISGPA 370
++Q +G IK+ V G+ DR + I+G A
Sbjct: 301 IRQMSGAQIKIANPVEGSTDRQVTITGSA 329
>gi|327263852|ref|XP_003216731.1| PREDICTED: poly(rC)-binding protein 2-like isoform 1 [Anolis
carolinensis]
Length = 360
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 163/369 (44%), Gaps = 53/369 (14%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTNAIFKA 71
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I+ ++ ++ + V RL+V ++Q G L+GKGG I E+R+ +GA
Sbjct: 72 FA--MIIDKLEEDISSSMTNSTASSRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPT 493
+++ G D +P + E + I G +++ E + QI + + P P
Sbjct: 130 QVQVAG-DMLP---NSTERAITIAGIPQSIIECVKQICVVM----LESPPKGVTIPYRPK 181
Query: 494 FLDQVSPFPSFIGR-RELSPPGMYSNFGPSFHKFDAVGGPPP-----PGSFH-PHDD--- 543
SP G+ R S Y + PS + GPP G + P D
Sbjct: 182 --PSSSPVIFAGGQDRYSSGSASYPHTAPSMCLNSDLEGPPQEAYTIQGQYAIPQPDLTK 239
Query: 544 -HSAFMHHIHRP---------GMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVP- 592
H M H P G+ PD K G+ + +
Sbjct: 240 LHQLAMQQSHFPMSHGNTGFSGVESSSPDEK--------------GYWAGLDASAQTTSH 285
Query: 593 -VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSL 651
+ +P L+ I G GA + +IRQ+S A+I I +P G+T+ + I+G+ AQ L
Sbjct: 286 ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYL 345
Query: 652 IQAFVMSET 660
I + SET
Sbjct: 346 INVRLSSET 354
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 118/280 (42%), Gaps = 70/280 (25%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T SS+ LRL+V ++Q G L+GKGGC IK
Sbjct: 65 TNAIFKAFAMIIDKL---EEDISSSMTNSTASSRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIP 258
+I D LP +++ + I G ++ + +K I +L++ P+ +IP
Sbjct: 122 EIRESTGAQVQVAGDMLPN---STERAITIAGIPQSIIECVKQICVVMLESPPKG-VTIP 177
Query: 259 GNP-------------------------TGPSHPL-------PDHSVSSQGAPYATGHRD 286
P T PS L P + + QG YA D
Sbjct: 178 YRPKPSSSPVIFAGGQDRYSSGSASYPHTAPSMCLNSDLEGPPQEAYTIQGQ-YAIPQPD 236
Query: 287 VADIH-LPMPPS-IPKFH--------------ESGVLDRPKPSPEILTFRLLCHDERVGG 330
+ +H L M S P H E G S + + L ++ +G
Sbjct: 237 LTKLHQLAMQQSHFPMSHGNTGFSGVESSSPDEKGYWAGLDASAQTTSHELTIPNDLIGC 296
Query: 331 VIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPA 370
+IG+ GA I ++Q +G IK+ V G+ DR + I+G A
Sbjct: 297 IIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSA 336
>gi|296189557|ref|XP_002742821.1| PREDICTED: poly(rC)-binding protein 1 isoform 1 [Callithrix
jacchus]
Length = 375
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 156/358 (43%), Gaps = 37/358 (10%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G IK++E +R+I ++GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIRKESGARIKILEG--NCPERIITLTGPTNAIFKA 71
Query: 377 SAPQDAVLR--VQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAY 434
A L + + + ++ +R T+ RL+V + Q G L+GKGG I E+RK +GA
Sbjct: 72 FAMIIYKLEEDINSSMTKSTAASRLVTL--RLVVPATQCGSLIGKGGCKIKEIRKSTGAQ 129
Query: 435 IRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTF 494
+++ G D +P + E + I G ++V + + QI + + L
Sbjct: 130 VQVAG-DMLP---NSTERAITIAGVPQSVTKCVKQICLVMLETLSHSPQGKVKTILYQPM 185
Query: 495 LDQVSPFPSFIGRRELSPPGMYSNF-----GPSFHKFDAVG----GPPPPGSFHP---HD 542
+ SP G+ S Y + GP + G P +
Sbjct: 186 PSR-SPVTCAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLNLAKLNQVARQQ 244
Query: 543 DHSAFMH-HIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVP 601
H A MH G+ P++K + + + +P +L+
Sbjct: 245 SHFAMMHGGTGFAGIDSSSPEVKGY-------------WASLDASTQITHELTIPNNLIG 291
Query: 602 IIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
I G G + +IRQ+S A+I I +P G++ + I+G+ AQ LI+A + SE
Sbjct: 292 CIIGRQGTNINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLIKARLSSE 349
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 117/274 (42%), Gaps = 62/274 (22%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSKFV-LRLLVLSTQVGCLLGKGGCVIKQ 211
T+ + KA ++ ++ E + + ++T +S+ V LRL+V +TQ G L+GKGGC IK+
Sbjct: 65 TNAIFKAFAMIIYKL---EEDINSSMTKSTAASRLVTLRLVVPATQCGSLIGKGGCKIKE 121
Query: 212 I------------DKLPTCALASDEVVQITGEVDTVRKALK---LISHQLLDNSPRDH-E 255
I D LP +++ + I G +V K +K L+ + L +SP+ +
Sbjct: 122 IRKSTGAQVQVAGDMLPN---STERAITIAGVPQSVTKCVKQICLVMLETLSHSPQGKVK 178
Query: 256 SIPGNPTGPSHPLP-----DHSVSSQGAPYAT--------GHRDVADIHLPMPPSIPKFH 302
+I P P+ D + G P+AT + H P ++ K +
Sbjct: 179 TILYQPMPSRSPVTCAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLNLAKLN 238
Query: 303 E--------------SGVLDRPKPSPEI------------LTFRLLCHDERVGGVIGKGG 336
+ +G SPE+ +T L + +G +IG+ G
Sbjct: 239 QVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQITHELTIPNNLIGCIIGRQG 298
Query: 337 AIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPA 370
I ++Q +G IK+ V G+ R + I+G A
Sbjct: 299 TNINEIRQMSGAQIKIANPVEGSSGRQVTITGSA 332
>gi|124359391|gb|ABN05855.1| KH, type 1 [Medicago truncatula]
Length = 222
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 96/177 (54%), Gaps = 24/177 (13%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDR- 375
+ FRLLC+ R+GGVIGK G +I++L+ TG I++ ++ + + DR+I++ G ++ D +
Sbjct: 48 VAFRLLCNSSRIGGVIGKSGTVIKNLQLTTGAKIRIEDSPNESPDRVIMVIGASNIDGKV 107
Query: 376 -------------ISAPQDAVLRVQTRIARAIPDNR-----EQTVMTRLLVASNQIGCLL 417
+S Q+A+LRV RI + ++TV RL+ S Q G ++
Sbjct: 108 MVRSHSGDGEAIEVSKAQEALLRVFDRILEVAAEMEGIELGDRTVSCRLVADSAQAGSVI 167
Query: 418 GKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRL 474
GKGG ++ +++K +G I + KD +P C S +EV+ E A + TR+
Sbjct: 168 GKGGKVVEKIKKDTGCKIWVC-KDNLPACISSPDEVI----ECSASRSMFGSAVTRI 219
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 102/222 (45%), Gaps = 51/222 (22%)
Query: 20 PNGKEKSQKLAGDYSENQPSKSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTI 79
PNG K K + QP G + FR+LC S+I GVIGK G ++ + TG I
Sbjct: 24 PNGSSKRAKPS--KPPQQPLPIPAGHVAFRLLCNSSRIGGVIGKSGTVIKNLQLTTGAKI 81
Query: 80 RVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASVADESDNKKEDSVNE 139
R+E++ + S +R++++ + N++ + ++G EA
Sbjct: 82 RIEDSPNESPDRVIMVIG-------ASNIDGKVMVRSHSGDGEAI--------------- 119
Query: 140 GSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVG 199
E SK Q+ALL VF+R++EV E E + + S RL+ S Q G
Sbjct: 120 ------------EVSKAQEALLRVFDRILEVAAEMEGIELGDRTVS---CRLVADSAQAG 164
Query: 200 CLLGKGGCVIKQI------------DKLPTCALASDEVVQIT 229
++GKGG V+++I D LP C + DEV++ +
Sbjct: 165 SVIGKGGKVVEKIKKDTGCKIWVCKDNLPACISSPDEVIECS 206
>gi|357147442|ref|XP_003574345.1| PREDICTED: LOW QUALITY PROTEIN: poly(rC)-binding protein 1-like
[Brachypodium distachyon]
Length = 447
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 158/360 (43%), Gaps = 49/360 (13%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISA 378
FR++ +VG +IG+ G +I+ L +ET ++V++ G +R++++SG P +
Sbjct: 49 FRMVVPVXKVGSIIGRKGELIKRLVEETKARVRVLDGPVGATERVVLVSGKEEPGLDLPP 108
Query: 379 PQDAVLRVQTR---IARAIPDNREQTV------MTRLLVASNQIGCLLGKGGSIIAEMRK 429
DA++RV R I D+ QT RLLV Q L+GK G+ I +++
Sbjct: 109 AMDALIRVFKRVNGITDVAADSTTQTAAPPGVCAARLLVPGAQAINLIGKQGASIKAIQE 168
Query: 430 LSGAYIRILGKD--QIPKCASENEEVVLINGEFEAVQEALFQITTRLRH----HFFRDAF 483
+GA IR++ D + P +++E +V I GE E V +AL ++ LR H F
Sbjct: 169 GTGATIRVISIDERERPFYVTDDERIVEIQGETEKVLKALQAVSNHLRKFLVDHSVLPLF 228
Query: 484 PSINRPLNP-----TFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSF 538
N P++ T+ D P S + + P + + P
Sbjct: 229 EKTNAPVSQDRSADTWADM--PHHSIVSTQVNQQPEVRDEY------------ILPMKRE 274
Query: 539 HPHDDHSAFM-HHIHRPGMPPHM--PDMKPWGPQGLMEVGGPMGFPDFVGPPHRRV--PV 593
H + + + H+IHR G+ + P + P G+ VGP ++ +
Sbjct: 275 HLYLEREPLVDHNIHRSGVSLYGRDPALSALRPSGMHS----------VGPLLTQITQTM 324
Query: 594 VVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQ 653
+P + I G GA + IR S A +TI + + + I GT Q AAQ LIQ
Sbjct: 325 QIPLTYAEDIIGVKGANIAYIRANSGAVVTIQESLGSPDDITVEIKGTSSQVQAAQQLIQ 384
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 93/224 (41%), Gaps = 70/224 (31%)
Query: 42 FPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNK 101
+PG +FR++ PV K+ +IG+ GE++ ++ ++T +RV + G+ ER+V++
Sbjct: 43 WPGDSVFRMVVPVXKVGSIIGRKGELIKRLVEETKARVRVLDGPVGATERVVLV------ 96
Query: 102 KETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALL 161
+G+EE + + AL+
Sbjct: 97 ----------------SGKEEPGL--------------------------DLPPAMDALI 114
Query: 162 LVFERMVEVEPETEVADQENTKSSK----FVLRLLVLSTQVGCLLGKGGCVIKQID---- 213
VF+R+ + T+VA T+++ RLLV Q L+GK G IK I
Sbjct: 115 RVFKRVNGI---TDVAADSTTQTAAPPGVCAARLLVPGAQAINLIGKQGASIKAIQEGTG 171
Query: 214 -----------KLPTCALASDEVVQITGEVDTVRKALKLISHQL 246
+ P + +V+I GE + V KAL+ +S+ L
Sbjct: 172 ATIRVISIDERERPFYVTDDERIVEIQGETEKVLKALQAVSNHL 215
>gi|63115359|gb|AAY33858.1| KH domain-containing protein [Betula platyphylla]
Length = 166
Score = 91.3 bits (225), Expect = 1e-15, Method: Composition-based stats.
Identities = 45/90 (50%), Positives = 67/90 (74%), Gaps = 1/90 (1%)
Query: 404 TRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAV 463
TRLLV +++IGCL+GKGG+I+ EMR+L+ A IRIL K+ +PK ASE++E+V I+G+ +
Sbjct: 8 TRLLVPTSRIGCLIGKGGAIVTEMRRLTKANIRILSKENLPKVASEDDEMVQISGDLDVA 67
Query: 464 QEALFQITTRLRHHFF-RDAFPSINRPLNP 492
++AL Q+ TRLR + F R+ S P+ P
Sbjct: 68 KDALMQVVTRLRANLFDREGAVSTFLPVLP 97
Score = 49.7 bits (117), Expect = 0.005, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 13/76 (17%)
Query: 187 FVLRLLVLSTQVGCLLGKGGCVIKQI-------------DKLPTCALASDEVVQITGEVD 233
F RLLV ++++GCL+GKGG ++ ++ + LP A DE+VQI+G++D
Sbjct: 6 FTTRLLVPTSRIGCLIGKGGAIVTEMRRLTKANIRILSKENLPKVASEDDEMVQISGDLD 65
Query: 234 TVRKALKLISHQLLDN 249
+ AL + +L N
Sbjct: 66 VAKDALMQVVTRLRAN 81
Score = 45.8 bits (107), Expect = 0.066, Method: Composition-based stats.
Identities = 33/97 (34%), Positives = 54/97 (55%), Gaps = 12/97 (12%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVME-----AVSGTEDRLIVISGPAH 371
T RLL R+G +IGKGGAI+ +++ T +I+++ V+ +D ++ ISG
Sbjct: 6 FTTRLLVPTSRIGCLIGKGGAIVTEMRRLTKANIRILSKENLPKVASEDDEMVQISGD-- 63
Query: 372 PDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLV 408
+ +DA+++V TR+ RA +RE V T L V
Sbjct: 64 ----LDVAKDALMQVVTRL-RANLFDREGAVSTFLPV 95
>gi|226502036|ref|NP_001148766.1| nucleic acid binding protein [Zea mays]
gi|195621990|gb|ACG32825.1| nucleic acid binding protein [Zea mays]
Length = 441
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 157/360 (43%), Gaps = 51/360 (14%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISA 378
FRL+ +VG +IG+ G +I+ L + T ++++E G +R++++SG P +S
Sbjct: 42 FRLVVPVLKVGSIIGRKGELIKRLVEGTKARVRILEGPVGATERIVLVSGKEDPGLELSP 101
Query: 379 PQDAVLRVQTRIARAIPDNREQT--------VMTRLLVASNQIGCLLGKGGSIIAEMRKL 430
DA++RV R+ E T RLLV Q L+GK G+ I +++
Sbjct: 102 AMDALMRVFKRVIGITDGAAEGTQAAATPGVCAARLLVPGAQAINLIGKQGATIKAIQES 161
Query: 431 SGAYIRILGKD--QIPKCASENEEVVLINGEFEAVQEALFQITTRLRHH--------FFR 480
+GA IR++ D + P +++E +V I G+ E V +AL ++ LR F
Sbjct: 162 TGATIRVISVDEHERPFYVTDDERIVEIQGDTEKVLKALQAVSNHLRKFLVDHSVLPLFE 221
Query: 481 DAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHP 540
++++ N + D P IG +++ P PS D P + +
Sbjct: 222 KTNTAVSQDHNVGWSDMSHP---SIGSAQVNQP-------PSV--VDEYILPVKRDTLY- 268
Query: 541 HDDHSAFMHHIHRPGMP-----PHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRV--PV 593
+ H+IHR G+ P + ++P G G GP ++ +
Sbjct: 269 LEREPLLDHNIHRSGVSLYGRDPALSTLRPPGIHG-------------AGPLLTQITQTM 315
Query: 594 VVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQ 653
+P + I G GA + IR S A +TI + + + I GT Q AAQ LIQ
Sbjct: 316 QIPLTYAEDIIGVKGANIAYIRANSGAVVTIQESLGSPDDITVEIKGTSSQVQAAQQLIQ 375
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 102/272 (37%), Gaps = 68/272 (25%)
Query: 42 FPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNK 101
+PG +FR++ PV K+ +IG+ GE++ ++ + T +R+ E G+ ER+V++
Sbjct: 36 WPGDSVFRLVVPVLKVGSIIGRKGELIKRLVEGTKARVRILEGPVGATERIVLVSG---- 91
Query: 102 KETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALL 161
KED E S MD AL+
Sbjct: 92 -------------------------------KEDPGLELSPAMD-------------ALM 107
Query: 162 LVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQID-------- 213
VF+R++ + Q RLLV Q L+GK G IK I
Sbjct: 108 RVFKRVIGITDGAAEGTQAAATPGVCAARLLVPGAQAINLIGKQGATIKAIQESTGATIR 167
Query: 214 -------KLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSH 266
+ P + +V+I G+ + V KAL+ +S+ L DH +P +
Sbjct: 168 VISVDEHERPFYVTDDERIVEIQGDTEKVLKALQAVSNH-LRKFLVDHSVLPLFEKTNTA 226
Query: 267 PLPDHSVSSQGAPYATGHRDVADIHLPMPPSI 298
DH+V H + + PPS+
Sbjct: 227 VSQDHNVGWSD----MSHPSIGSAQVNQPPSV 254
>gi|387017714|gb|AFJ50975.1| Poly(rC)-binding protein 2-like [Crotalus adamanteus]
Length = 347
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 162/357 (45%), Gaps = 42/357 (11%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTNAIFKA 71
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I+ ++ ++ + V RL+V ++Q G L+GKGG I E+R+ +GA
Sbjct: 72 FA--MIIDKLEEDISSSMTNSTASSRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPT 493
+++ G D +P + E + I G +++ E + QI + + P P
Sbjct: 130 QVQVAG-DMLP---NSTERAITIAGIPQSIIECVKQICVVM----LESPPKGVTIPYRPK 181
Query: 494 FLDQVSPFPSFIGR-RELSPPGMYSNFGPSFHKFDAVGGPPP-----PGSFH-PHDDHSA 546
SP G+ R S Y + PS + GPP G + P D
Sbjct: 182 --PSSSPVIFAGGQDRYSSGSASYPHTAPSMCLNSDLEGPPQEAYTIQGQYAIPQPD--- 236
Query: 547 FMHHIHRPGM-PPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVP--VVVPRSLVPII 603
+ +H+ M H P G GF + + + +P L+ I
Sbjct: 237 -LTKLHQLAMQQSHFPMSH-----------GNTGFSAGLDASAQTTSHELTIPNDLIGCI 284
Query: 604 QGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSET 660
G GA + +IRQ+S A+I I +P G+T+ + I+G+ AQ LI + SET
Sbjct: 285 IGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVRLSSET 341
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 118/267 (44%), Gaps = 57/267 (21%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T SS+ LRL+V ++Q G L+GKGGC IK
Sbjct: 65 TNAIFKAFAMIIDKL---EEDISSSMTNSTASSRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIP 258
+I D LP +++ + I G ++ + +K I +L++ P+ +IP
Sbjct: 122 EIRESTGAQVQVAGDMLPN---STERAITIAGIPQSIIECVKQICVVMLESPPKG-VTIP 177
Query: 259 GNP-------------------------TGPSHPL-------PDHSVSSQGAPYATGHRD 286
P T PS L P + + QG YA D
Sbjct: 178 YRPKPSSSPVIFAGGQDRYSSGSASYPHTAPSMCLNSDLEGPPQEAYTIQGQ-YAIPQPD 236
Query: 287 VADIH-LPMPPS-IPKFH-ESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLK 343
+ +H L M S P H +G S + + L ++ +G +IG+ GA I ++
Sbjct: 237 LTKLHQLAMQQSHFPMSHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIR 296
Query: 344 QETGCDIKVMEAVSGTEDRLIVISGPA 370
Q +G IK+ V G+ DR + I+G A
Sbjct: 297 QMSGAQIKIANPVEGSTDRQVTITGSA 323
>gi|14141168|ref|NP_005007.2| poly(rC)-binding protein 2 isoform a [Homo sapiens]
gi|47940610|gb|AAH71942.1| Poly(rC) binding protein 2 [Homo sapiens]
gi|119617115|gb|EAW96709.1| poly(rC) binding protein 2, isoform CRA_d [Homo sapiens]
Length = 366
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 165/371 (44%), Gaps = 51/371 (13%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTNAIFKA 71
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I+ ++ ++ + V RL+V ++Q G L+GKGG I E+R+ +GA
Sbjct: 72 FA--MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPT 493
+++ G D +P + E + I G +++ E + QI + + + P P
Sbjct: 130 QVQVAG-DMLP---NSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPK 185
Query: 494 FLDQVSPFPSFIGRRELSPPGMYSNF---GPSFHKFDAVGGPP-----PPGSFH-PHDD- 543
SP G+ S ++F PS + GPP G + P D
Sbjct: 186 --PSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDL 243
Query: 544 ---HSAFMHHIHRP---------GMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRV 591
H M H P G+ P++K G+ + +
Sbjct: 244 TKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVK--------------GYWAGLDASAQTT 289
Query: 592 P--VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQ 649
+ +P L+ I G GA + +IRQ+S A+I I +P G+T+ + I+G+ AQ
Sbjct: 290 SHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQ 349
Query: 650 SLIQAFVMSET 660
LI + SET
Sbjct: 350 YLINVRLSSET 360
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 113/282 (40%), Gaps = 68/282 (24%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T +S+ LRL+V ++Q G L+GKGGC IK
Sbjct: 65 TNAIFKAFAMIIDKL---EEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIP 258
+I D LP + + I + K + ++ + L SP +IP
Sbjct: 122 EIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIP 181
Query: 259 GNPTGPSHPL----------------------------------PDHSVSSQGAPYATGH 284
P S P+ P + + QG YA
Sbjct: 182 YRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQ-YAIPQ 240
Query: 285 RDVADIH-LPMPPS-IPKFH-ESGVLDRPKPSPEILTF-------------RLLCHDERV 328
D+ +H L M S P H +G SPE+ + L ++ +
Sbjct: 241 PDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLI 300
Query: 329 GGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPA 370
G +IG+ GA I ++Q +G IK+ V G+ DR + I+G A
Sbjct: 301 GCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSA 342
>gi|327263854|ref|XP_003216732.1| PREDICTED: poly(rC)-binding protein 2-like isoform 2 [Anolis
carolinensis]
Length = 331
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/358 (25%), Positives = 156/358 (43%), Gaps = 60/358 (16%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTNAIFKA 71
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I+ ++ ++ + V RL+V ++Q G L+GKGG I E+R+ +GA
Sbjct: 72 FAM--IIDKLEEDISSSMTNSTASSRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPT 493
+++ G D +P + E + I G +++ E + QI + + P P
Sbjct: 130 QVQVAG-DMLP---NSTERAITIAGIPQSIIECVKQICVVM----LESPPKGVTIPYRPK 181
Query: 494 FLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHR 553
SP F G + + G Y+ P K H M H
Sbjct: 182 --PSSSPVI-FAGGQAYTIQGQYAIPQPDLTKL-----------------HQLAMQQSHF 221
Query: 554 P---------GMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVP--VVVPRSLVPI 602
P G+ PD K G+ + + + +P L+
Sbjct: 222 PMSHGNTGFSGVESSSPDEK--------------GYWAGLDASAQTTSHELTIPNDLIGC 267
Query: 603 IQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSET 660
I G GA + +IRQ+S A+I I +P G+T+ + I+G+ AQ LI + SET
Sbjct: 268 IIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVRLSSET 325
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 116/251 (46%), Gaps = 41/251 (16%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T SS+ LRL+V ++Q G L+GKGGC IK
Sbjct: 65 TNAIFKAFAMIIDKL---EEDISSSMTNSTASSRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIP 258
+I D LP +++ + I G ++ + +K I +L++ P+ +IP
Sbjct: 122 EIRESTGAQVQVAGDMLPN---STERAITIAGIPQSIIECVKQICVVMLESPPKG-VTIP 177
Query: 259 GNPTGPSHPL---PDHSVSSQGAPYATGHRDVADIH-LPMPPS-IPKFH----------- 302
P S P+ + + QG YA D+ +H L M S P H
Sbjct: 178 YRPKPSSSPVIFAGGQAYTIQGQ-YAIPQPDLTKLHQLAMQQSHFPMSHGNTGFSGVESS 236
Query: 303 ---ESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGT 359
E G S + + L ++ +G +IG+ GA I ++Q +G IK+ V G+
Sbjct: 237 SPDEKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGS 296
Query: 360 EDRLIVISGPA 370
DR + I+G A
Sbjct: 297 TDRQVTITGSA 307
>gi|417410200|gb|JAA51577.1| Putative polyc-binding alphacp-1, partial [Desmodus rotundus]
Length = 378
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 165/371 (44%), Gaps = 51/371 (13%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 26 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTNAIFKA 83
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I+ ++ ++ + V RL+V ++Q G L+GKGG I E+R+ +GA
Sbjct: 84 FA--MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 141
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPT 493
+++ G D +P + E + I G +++ E + QI + + + P P
Sbjct: 142 QVQVAG-DMLP---NSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPK 197
Query: 494 FLDQVSPFPSFIGRRELSPPGMYSNF---GPSFHKFDAVGGPPP-----PGSFH-PHDD- 543
SP G+ S ++F PS + GPP G + P D
Sbjct: 198 --PSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDL 255
Query: 544 ---HSAFMHHIHRP---------GMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRV 591
H M H P G+ P++K G+ + +
Sbjct: 256 TKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVK--------------GYWAGLDASAQTT 301
Query: 592 P--VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQ 649
+ +P L+ I G GA + +IRQ+S A+I I +P G+T+ + I+G+ AQ
Sbjct: 302 SHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQ 361
Query: 650 SLIQAFVMSET 660
LI + SET
Sbjct: 362 YLINVRLSSET 372
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 113/282 (40%), Gaps = 68/282 (24%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T +S+ LRL+V ++Q G L+GKGGC IK
Sbjct: 77 TNAIFKAFAMIIDKL---EEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 133
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIP 258
+I D LP + + I + K + ++ + L SP +IP
Sbjct: 134 EIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIP 193
Query: 259 GNPTGPSHPL----------------------------------PDHSVSSQGAPYATGH 284
P S P+ P + + QG YA
Sbjct: 194 YRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQ-YAIPQ 252
Query: 285 RDVADIH-LPMPPS-IPKFH-ESGVLDRPKPSPEILTF-------------RLLCHDERV 328
D+ +H L M S P H +G SPE+ + L ++ +
Sbjct: 253 PDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLI 312
Query: 329 GGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPA 370
G +IG+ GA I ++Q +G IK+ V G+ DR + I+G A
Sbjct: 313 GCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSA 354
>gi|222613081|gb|EEE51213.1| hypothetical protein OsJ_32035 [Oryza sativa Japonica Group]
Length = 861
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 151/343 (44%), Gaps = 86/343 (25%)
Query: 357 SGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCL 416
+ +E+RLIV+S PDD +S +A++ + ++ A + +N + T TRL+V SN++GC+
Sbjct: 543 NASEERLIVVSSQEIPDDPVSPTIEALILLHSK-ASTLAENHQLT--TRLVVPSNKVGCI 599
Query: 417 LGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRH 476
LG+GG +I EMR+ +GA IR+ K PK S +EE+ VQ ++F T L++
Sbjct: 600 LGEGGKVITEMRRRTGAEIRVYSKADKPKYLSFDEEL---------VQASVFSFTLGLQN 650
Query: 477 ----------------HFFRDAFPSINRPLNPT----------------FLDQVSPFPSF 504
+F + +PS + + P+ +SP +
Sbjct: 651 LRTGPAHDPYTVYPVEYFSKREYPSGSSKVAPSASYERYAATTRLPNGELPSSISPGADY 710
Query: 505 IGRREL---SPPGMYSN-----FGPSFHKFDAVG--GPPPPGSFHPHDDHSAFMHHIHRP 554
+ R P YSN G S V G G+ + + D++ IH
Sbjct: 711 MSCRSYLDQVPTDRYSNRVTLQLGLSRAGNSNVQQLGITRAGNSNAY-DYTEAAEQIH-- 767
Query: 555 GMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVV-VPRSLVPIIQGEDGACLKQ 613
G + + G G+P G + +V SLV +I G
Sbjct: 768 ------------GREDYRRLSGLTGYPG--GSSNCGFQIVNWSLSLVLVISG-------- 805
Query: 614 IRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFV 656
A++ + + PG++E+++ I G P+Q AAQSL+Q F+
Sbjct: 806 ------ARVKLHEAHPGSSESIVEIQGIPDQVKAAQSLLQGFI 842
>gi|358343600|ref|XP_003635888.1| Poly(rC)-binding protein [Medicago truncatula]
gi|358344098|ref|XP_003636130.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355501823|gb|AES83026.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355502065|gb|AES83268.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 241
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 124/254 (48%), Gaps = 51/254 (20%)
Query: 410 SNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQ 469
S+Q+G ++GKGG I+ +R SG+ IR+ P CA+++EE++LI G + ++ AL +
Sbjct: 28 SSQVGAIVGKGGKNISNIRNNSGSNIRVC---PAPHCAAKDEELILITGGYRCIENALRK 84
Query: 470 ITTRLRHHFFRDAFPSINRPLNPTF-LDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDA 528
IT+ +R++ + + R + P+F L++ + FI R++ S P F
Sbjct: 85 ITSIIRNNPLTNEVLAEAR-IKPSFPLNKDTVRSKFITRKKSSFP------------FAR 131
Query: 529 VGGPPPPGSFHPH-------DDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFP 581
V PP + + H+ + ++ PG + +
Sbjct: 132 V--PPQNAGVYQAKKVTENGESHTNLIENVE-PGRGNIVATV------------------ 170
Query: 582 DFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKP-GATETVIIISG 640
+ V ++V + + GEDG L +IRQIS A +T+ DP G + ++ISG
Sbjct: 171 -----TNTTVEIIVSEHVFGSVYGEDGGNLDRIRQISGADVTVFDPSSTGTSGGKVVISG 225
Query: 641 TPEQTHAAQSLIQA 654
TP+QT AAQSL+QA
Sbjct: 226 TPDQTFAAQSLLQA 239
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 91/209 (43%), Gaps = 28/209 (13%)
Query: 195 STQVGCLLGKGGCVIKQIDK----------LPTCALASDEVVQITGEVDTVRKALKLISH 244
S+QVG ++GKGG I I P CA +E++ ITG + AL+ I+
Sbjct: 28 SSQVGAIVGKGGKNISNIRNNSGSNIRVCPAPHCAAKDEELILITGGYRCIENALRKIT- 86
Query: 245 QLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQ-------GAPYATGHRDVADIHLPMPPS 297
++ N+P +E + PS PL +V S+ P+A A ++ +
Sbjct: 87 SIIRNNPLTNEVLAEARIKPSFPLNKDTVRSKFITRKKSSFPFARVPPQNAGVYQAKKVT 146
Query: 298 IPKFHESGVLDRPKPSPEIL-------TFRLLCHDERVGGVIGKGGAIIRSLKQETGCDI 350
+ +++ +P + T ++ + G V G+ G + ++Q +G D+
Sbjct: 147 ENGESHTNLIENVEPGRGNIVATVTNTTVEIIVSEHVFGSVYGEDGGNLDRIRQISGADV 206
Query: 351 KVME-AVSGTEDRLIVISGPAHPDDRISA 378
V + + +GT +VISG PD +A
Sbjct: 207 TVFDPSSTGTSGGKVVISGT--PDQTFAA 233
>gi|242038781|ref|XP_002466785.1| hypothetical protein SORBIDRAFT_01g014200 [Sorghum bicolor]
gi|241920639|gb|EER93783.1| hypothetical protein SORBIDRAFT_01g014200 [Sorghum bicolor]
Length = 430
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 90/167 (53%), Gaps = 13/167 (7%)
Query: 318 TFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRIS 377
FR+L ++VG +IG+ G I+ + +ET IK+++ G +R ++IS PD +S
Sbjct: 122 VFRILVPAQKVGAIIGRKGEFIKKMCEETKARIKILDGPPGVPERAVMISAKDEPDAPLS 181
Query: 378 APQDAVLRVQTRIARAIPDNREQTVM---------TRLLVASNQIGCLLGKGGSIIAEMR 428
D +LRV RI + N E + TRLLV S+Q G L+GK G+ I ++
Sbjct: 182 PAVDGLLRVHKRITDS--SNGESGQLQRSAGNIGPTRLLVPSSQAGSLIGKQGATIKSIQ 239
Query: 429 KLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLR 475
S + +RI+ + +P A ++ VV I GE VQ+A+ I + LR
Sbjct: 240 DSSKSVVRIV--ENVPPVALNDDRVVEIQGEPLGVQKAVELIASHLR 284
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 89/216 (41%), Gaps = 60/216 (27%)
Query: 42 FPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNK 101
+PG +FR+L P K+ +IG+ GE + ++ ++T I++ + G ER V+I
Sbjct: 117 WPGESVFRILVPAQKVGAIIGRKGEFIKKMCEETKARIKILDGPPGVPERAVMI------ 170
Query: 102 KETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALL 161
S DE D +V+ LL
Sbjct: 171 ----------------------SAKDEPDAPLSPAVD--------------------GLL 188
Query: 162 LVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI--------- 212
V +R+ + E + + + RLLV S+Q G L+GK G IK I
Sbjct: 189 RVHKRITDSS-NGESGQLQRSAGNIGPTRLLVPSSQAGSLIGKQGATIKSIQDSSKSVVR 247
Query: 213 --DKLPTCALASDEVVQITGEVDTVRKALKLISHQL 246
+ +P AL D VV+I GE V+KA++LI+ L
Sbjct: 248 IVENVPPVALNDDRVVEIQGEPLGVQKAVELIASHL 283
>gi|308798891|ref|XP_003074225.1| putative nucleic acid binding protein (ISS) [Ostreococcus tauri]
gi|116000397|emb|CAL50077.1| putative nucleic acid binding protein (ISS) [Ostreococcus tauri]
Length = 402
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 106/386 (27%), Positives = 164/386 (42%), Gaps = 81/386 (20%)
Query: 318 TFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAH---PDD 374
FR+LC + RVGG+IG+ G +R + ETG +KV+ + + +R ++I P P D
Sbjct: 17 VFRVLCAETRVGGLIGRQGKRVRGIVTETGAQVKVLASTARCHERAVLIFAPRARDGPGD 76
Query: 375 RISAPQDA--VLRVQTRIARAIPDNR--------------------------------EQ 400
+A + A V+R TR ARA+ ++
Sbjct: 77 TCAAREGARRVVRYLTR-ARAVTEDECDGARDESEDESDDDDDGRRGDGVGGQDLGRSTA 135
Query: 401 TVMTRLLVASNQIGCLLGKGGSIIAEMRK-LSGAYIRILGKDQIPKCASENEEVVLINGE 459
V RLLV + Q G L+GKGG I E+RK +GA++ + Q+P CA+ + VV I+G+
Sbjct: 136 HVTLRLLVPAGQAGHLIGKGGENIQEVRKRANGAHVAVQEVGQVPPCATSEDRVVEIHGK 195
Query: 460 FEAVQEALFQITTRLRHHFFRDAF-----PSINRPLNPTFLDQVSPFPSFIGRRELSPPG 514
+ V+ A + L+ + + P++ P D V IG +S P
Sbjct: 196 PKDVRVAADAVFESLKDYLVDSSVLGHYQPTVAAPAGANVGD-VGATAMGIGNHPMSAPM 254
Query: 515 MYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEV 574
+ G VG PG+ M P MP M P G+
Sbjct: 255 GMAPVG-----MAPVG--MAPGTM-----------------MIPVMPMMTQMQP-GMQ-- 287
Query: 575 GGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATET 634
P G P P H V + + V + GE GA + I QIS ++++ + P +
Sbjct: 288 --PAGMP----PVHDSVEIDGEK--VANVLGEHGANISTIAQISGCQVSLIETNPDTNLS 339
Query: 635 VIIISGTPEQT-HAAQSLIQAFVMSE 659
+ +SG E AA+SL++AF E
Sbjct: 340 EVELSGPHESNIAAAKSLVRAFAEGE 365
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 152/366 (41%), Gaps = 73/366 (19%)
Query: 44 GGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVI---EASDN 100
G +FRVLC +++ G+IG+ G+ + I +TG ++V + + ER V+I A D
Sbjct: 14 GTAVFRVLCAETRVGGLIGRQGKRVRGIVTETGAQVKVLASTARCHERAVLIFAPRARDG 73
Query: 101 KKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKAL 160
+T E + R A DE D +++S +E
Sbjct: 74 PGDTCAAREGARRVVRYLTRARAVTEDECDGARDESEDE--------------------- 112
Query: 161 LLVFERMVEVEPETEVADQENTKSSKFV-LRLLVLSTQVGCLLGKGG------------- 206
+ + V Q+ +S+ V LRLLV + Q G L+GKGG
Sbjct: 113 ---SDDDDDGRRGDGVGGQDLGRSTAHVTLRLLVPAGQAGHLIGKGGENIQEVRKRANGA 169
Query: 207 -CVIKQIDKLPTCALASDEVVQITGEVDTVRKA----LKLISHQLLDNSPRDH-ESIPGN 260
++++ ++P CA + D VV+I G+ VR A + + L+D+S H +
Sbjct: 170 HVAVQEVGQVPPCATSEDRVVEIHGKPKDVRVAADAVFESLKDYLVDSSVLGHYQPTVAA 229
Query: 261 PTGPSHPLPDHSVSSQG-------APYATGHRDVADIHLP----MPPSIPKFHESGVLDR 309
P G + + D ++ G AP +A + + M P +P + +
Sbjct: 230 PAGAN--VGDVGATAMGIGNHPMSAPMGMAPVGMAPVGMAPGTMMIPVMPMMTQMQPGMQ 287
Query: 310 PKPSPEILTFRLLCHD------ERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRL 363
P P + HD E+V V+G+ GA I ++ Q +GC + ++E T
Sbjct: 288 PAGMPPV-------HDSVEIDGEKVANVLGEHGANISTIAQISGCQVSLIETNPDTNLSE 340
Query: 364 IVISGP 369
+ +SGP
Sbjct: 341 VELSGP 346
>gi|28317389|tpe|CAD29864.1| TPA: hnRNP-E2 b [Xenopus laevis]
Length = 319
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 151/348 (43%), Gaps = 54/348 (15%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTNAIFK- 70
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I+ ++ ++ + V RL+V ++Q G L+GKGG I E+R+ +GA
Sbjct: 71 -AFSMIIDKLEEDISSSMTNSTASSKPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPT 493
+++ G D +P + E + I G +++ E + QI + + P P
Sbjct: 130 QVQVAG-DMLP---NSTERAITIAGIPQSIIECVKQICVVM----LESPPKGVTIPYRPK 181
Query: 494 FLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHR 553
SP F G + + G Y+ P K H M H
Sbjct: 182 --PSSSPVI-FAGGQAYTIQGQYAIPQPDLTKL-----------------HQLAMQQSHF 221
Query: 554 PGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVP--VVVPRSLVPIIQGEDGACL 611
P M G GF + + + +P L+ I G GA +
Sbjct: 222 P-----------------MSHSGNTGFSGGIDASAQATSHELTIPNDLIGCIIGRQGAKI 264
Query: 612 KQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
+IRQ+S A+I I +P G+ + + I+G+ AQ LI + SE
Sbjct: 265 NEIRQMSGAQIKIANPVEGSNDRQVTITGSTASISLAQYLINVRLSSE 312
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 117/240 (48%), Gaps = 35/240 (14%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T SSK LRL+V ++Q G L+GKGGC IK
Sbjct: 65 TNAIFKAFSMIIDKL---EEDISSSMTNSTASSKPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIP 258
+I D LP +++ + I G ++ + +K I +L++ P+ +IP
Sbjct: 122 EIRESTGAQVQVAGDMLPN---STERAITIAGIPQSIIECVKQICVVMLESPPKG-VTIP 177
Query: 259 GNPTGPSHPL---PDHSVSSQGAPYATGHRDVADIH-LPMPPS-IPKFHE-----SGVLD 308
P S P+ + + QG YA D+ +H L M S P H SG +D
Sbjct: 178 YRPKPSSSPVIFAGGQAYTIQGQ-YAIPQPDLTKLHQLAMQQSHFPMSHSGNTGFSGGID 236
Query: 309 RPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
S + + L ++ +G +IG+ GA I ++Q +G IK+ V G+ DR + I+G
Sbjct: 237 ---ASAQATSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSNDRQVTITG 293
>gi|384947380|gb|AFI37295.1| poly(rC)-binding protein 1 [Macaca mulatta]
Length = 358
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 94/361 (26%), Positives = 161/361 (44%), Gaps = 39/361 (10%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTNAIFKA 71
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I ++ ++ + V RL+V + Q G L+GKGG I E+R+ +GA
Sbjct: 72 FAM--IIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSI-NRPLNP 492
+++ G D +P + E + I G ++V E + QI + + + P P
Sbjct: 130 QVQVAG-DMLP---NSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQP 185
Query: 493 TFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHS------A 546
+ SP G+ S Y + + H + PP ++ H+ A
Sbjct: 186 --MPASSPVICAGGQDRCSDAAGYPH---ATHDLEG----PPLDAYSIQGQHTISPLDLA 236
Query: 547 FMHHIHRPGMPPHMPDMKPWGPQGLM-------EVGGPMGFPDFVGPPHRRVPVVVPRSL 599
++ + R H M G G EV G D + +P L
Sbjct: 237 KLNQVAR--QQSHFAMMH--GGTGFAGIDSSSPEVKGYWAGLDASAQTTSH-ELTIPNDL 291
Query: 600 VPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
+ I G GA + +IRQ+S A+I I +P G+T+ + I+G+ AQ LI + SE
Sbjct: 292 IGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVRLSSE 351
Query: 660 T 660
T
Sbjct: 352 T 352
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 117/276 (42%), Gaps = 64/276 (23%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T +S+ LRL+V +TQ G L+GKGGC IK
Sbjct: 65 TNAIFKAFAMIIDKL---EEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIK 121
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALK---LISHQLLDNSPRDH- 254
+I D LP +++ + I G +V + +K L+ + L SP+
Sbjct: 122 EIRESTGAQVQVAGDMLPN---STERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRV 178
Query: 255 ESIPGNPTGPSHPL-----PDHSVSSQGAPYAT--------GHRDVADIHLPMPPSIPKF 301
+IP P S P+ D + G P+AT + H P + K
Sbjct: 179 MTIPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKL 238
Query: 302 HE--------------SGVLDRPKPSPEILTF-------------RLLCHDERVGGVIGK 334
++ +G SPE+ + L ++ +G +IG+
Sbjct: 239 NQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGR 298
Query: 335 GGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPA 370
GA I ++Q +G IK+ V G+ DR + I+G A
Sbjct: 299 QGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSA 334
>gi|417399455|gb|JAA46731.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 351
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 161/357 (45%), Gaps = 39/357 (10%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTNAIFKA 71
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I+ ++ ++ + V RL+V ++Q G L+GKGG I E+R+ +GA
Sbjct: 72 FA--MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPT 493
+++ G D +P + E + I G +++ E + QI + + + P P
Sbjct: 130 QVQVAG-DMLP---NSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPK 185
Query: 494 FLDQVSPFPSFIGRRELSPPGMYSNF---GPSFHKFDAVGGPPPPGSFHPHDDHSAF--- 547
SP G+ S ++F PS + GPP + +
Sbjct: 186 --PSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPP----LEAYTIQGQYAIP 239
Query: 548 ---MHHIHRPGM-PPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRV-PVVVPRSLVPI 602
+ +H+ M H P G GF + + + +P +L+
Sbjct: 240 QPDLTKLHQLAMQQSHFPMTH-----------GNTGFSASLDASTQTTHELTIPNNLIGC 288
Query: 603 IQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
I G GA + +IRQ+S A+I I +P G++ + I+G+ AQ LI A + SE
Sbjct: 289 IIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLINARLSSE 345
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 107/268 (39%), Gaps = 54/268 (20%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T +S+ LRL+V ++Q G L+GKGGC IK
Sbjct: 65 TNAIFKAFAMIIDKL---EEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIP 258
+I D LP + + I + K + ++ + L SP +IP
Sbjct: 122 EIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIP 181
Query: 259 GNPTGPSHPL----------------------------------PDHSVSSQGAPYATGH 284
P S P+ P + + QG YA
Sbjct: 182 YRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQ-YAIPQ 240
Query: 285 RDVADIH-LPMPPS-IPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSL 342
D+ +H L M S P H + + T L + +G +IG+ GA I +
Sbjct: 241 PDLTKLHQLAMQQSHFPMTHGNTGFSASLDASTQTTHELTIPNNLIGCIIGRQGANINEI 300
Query: 343 KQETGCDIKVMEAVSGTEDRLIVISGPA 370
+Q +G IK+ V G+ R + I+G A
Sbjct: 301 RQMSGAQIKIANPVEGSSGRQVTITGSA 328
>gi|397521888|ref|XP_003831016.1| PREDICTED: poly(rC)-binding protein 1 [Pan paniscus]
Length = 455
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 161/373 (43%), Gaps = 40/373 (10%)
Query: 304 SGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRL 363
+G LD LT RLL H + VG +IGK G ++ +++E+G I + E +R+
Sbjct: 100 TGGLDEENELNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERI 157
Query: 364 IVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKG 420
I ++GP + + A + +++ I ++ ++ + V RL+V + Q G L+GKG
Sbjct: 158 ITLTGPTNAIFKAFAM--IIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKG 215
Query: 421 GSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFR 480
G I E+R+ +GA +++ G D +P + E + I G ++V E + QI + +
Sbjct: 216 GCKIKEIRESTGAQVQVAG-DMLP---NSTERAITIAGVPQSVTECVKQICLVMLETLSQ 271
Query: 481 DAFPSI-NRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNF-----GPSFHKFDAVG---- 530
+ P P + SP G+ S Y + GP + G
Sbjct: 272 SPQGRVMTIPYQP--MPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTI 329
Query: 531 GPPPPGSFHP---HDDHSAFMH-HIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGP 586
P + H A MH G+ P++K + +
Sbjct: 330 SPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGY-------------WASLDAS 376
Query: 587 PHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTH 646
+ +P +L+ I G GA + +IRQ+S A+I I +P G++ + I+G+
Sbjct: 377 TQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASIS 436
Query: 647 AAQSLIQAFVMSE 659
AQ LI A + SE
Sbjct: 437 LAQYLINARLSSE 449
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 115/275 (41%), Gaps = 63/275 (22%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T +S+ LRL+V +TQ G L+GKGGC IK
Sbjct: 164 TNAIFKAFAMIIDKL---EEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIK 220
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALK---LISHQLLDNSPRDH- 254
+I D LP +++ + I G +V + +K L+ + L SP+
Sbjct: 221 EIRESTGAQVQVAGDMLPN---STERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRV 277
Query: 255 ESIPGNPTGPSHPL-----PDHSVSSQGAPYAT--------GHRDVADIHLPMPPSIPKF 301
+IP P S P+ D + G P+AT + H P + K
Sbjct: 278 MTIPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKL 337
Query: 302 HE--------------SGVLDRPKPSPEI------------LTFRLLCHDERVGGVIGKG 335
++ +G SPE+ T L + +G +IG+
Sbjct: 338 NQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQ 397
Query: 336 GAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPA 370
GA I ++Q +G IK+ V G+ R + I+G A
Sbjct: 398 GANINEIRQMSGAQIKIANPVEGSSGRQVTITGSA 432
>gi|351712813|gb|EHB15732.1| Poly(rC)-binding protein 1 [Heterocephalus glaber]
Length = 355
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 158/366 (43%), Gaps = 52/366 (14%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 13 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTNAIFKA 70
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I ++ ++ + V RL+V + Q G L+GKGG I E+R+ +GA
Sbjct: 71 FAM--IIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGA 128
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSI-NRPLNP 492
+++ G D +P + E + I G ++V E + QI + + + P P
Sbjct: 129 QVQVAG-DMLP---NSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQP 184
Query: 493 TFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPG-------SFHPHD--- 542
+ SP G+ S Y H + GPP + P D
Sbjct: 185 --MPASSPVICAGGQDRCSDAAGYP------HATHDLEGPPLDAYSIQGQHTISPLDLAK 236
Query: 543 --------DHSAFMH-HIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPV 593
H A MH G+ P++K + + +
Sbjct: 237 LNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGY-------------WASLDASTQTTHEL 283
Query: 594 VVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQ 653
+P +L+ I G GA + +IRQ+S A+I I +P G++ I I+G+ AQ LI
Sbjct: 284 TIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQITITGSAASISLAQYLIN 343
Query: 654 AFVMSE 659
A + SE
Sbjct: 344 ARLSSE 349
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 143/361 (39%), Gaps = 86/361 (23%)
Query: 67 MMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASVA 126
M + +++ VT+ + + G + ++ + ++ K E A I SE N E
Sbjct: 1 MDAGVTEGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERI--- 57
Query: 127 DESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSK 186
+ + G T+ + KA ++ +++ E + + +T +S+
Sbjct: 58 ---------------ITLTG-----PTNAIFKAFAMIIDKL---EEDINSSMTNSTAASR 94
Query: 187 --FVLRLLVLSTQVGCLLGKGGCVIKQI------------DKLPTCALASDEVVQITGEV 232
LRL+V +TQ G L+GKGGC IK+I D LP +++ + I G
Sbjct: 95 PPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPN---STERAITIAGVP 151
Query: 233 DTVRKALK---LISHQLLDNSPRDH-ESIPGNPTGPSHPL-----PDHSVSSQGAPYAT- 282
+V + +K L+ + L SP+ +IP P S P+ D + G P+AT
Sbjct: 152 QSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHATH 211
Query: 283 -------GHRDVADIHLPMPPSIPKFHE--------------SGVLDRPKPSPEI----- 316
+ H P + K ++ +G SPE+
Sbjct: 212 DLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWA 271
Query: 317 -------LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGP 369
T L + +G +IG+ GA I ++Q +G IK+ V G+ R I I+G
Sbjct: 272 SLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQITITGS 331
Query: 370 A 370
A
Sbjct: 332 A 332
>gi|148833484|ref|NP_001092090.1| poly(rC)-binding protein 2 isoform c [Homo sapiens]
gi|157042772|ref|NP_001096636.1| poly(rC)-binding protein 2 isoform 3 [Mus musculus]
gi|73996241|ref|XP_857995.1| PREDICTED: poly(rC)-binding protein 2 isoform 20 [Canis lupus
familiaris]
gi|149714839|ref|XP_001504575.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Equus caballus]
gi|291389259|ref|XP_002711066.1| PREDICTED: poly(rC) binding protein 2-like isoform 3 [Oryctolagus
cuniculus]
gi|332206041|ref|XP_003252098.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Nomascus
leucogenys]
gi|348581075|ref|XP_003476303.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Cavia porcellus]
gi|410964551|ref|XP_003988817.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Felis catus]
gi|426224372|ref|XP_004006345.1| PREDICTED: poly(rC)-binding protein 2 isoform 3 [Ovis aries]
gi|426372755|ref|XP_004053283.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Gorilla gorilla
gorilla]
gi|51491472|dbj|BAD36897.1| poly(rC) binding protein 2 [Homo sapiens]
gi|119617112|gb|EAW96706.1| poly(rC) binding protein 2, isoform CRA_a [Homo sapiens]
gi|148672027|gb|EDL03974.1| poly(rC) binding protein 2, isoform CRA_a [Mus musculus]
gi|149031921|gb|EDL86833.1| rCG50739, isoform CRA_b [Rattus norvegicus]
Length = 331
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 157/358 (43%), Gaps = 60/358 (16%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTNAIFKA 71
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I+ ++ ++ + V RL+V ++Q G L+GKGG I E+R+ +GA
Sbjct: 72 FA--MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPT 493
+++ G D +P + E + I G +++ E + QI + + P P
Sbjct: 130 QVQVAG-DMLP---NSTERAITIAGIPQSIIECVKQICVVM----LESPPKGVTIPYRPK 181
Query: 494 FLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHR 553
SP F G + + G Y+ P K H M H
Sbjct: 182 --PSSSPVI-FAGGQAYTIQGQYAIPQPDLTKL-----------------HQLAMQQSHF 221
Query: 554 P---------GMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVP--VVVPRSLVPI 602
P G+ P++K G+ + + + +P L+
Sbjct: 222 PMTHGNTGFSGIESSSPEVK--------------GYWAGLDASAQTTSHELTIPNDLIGC 267
Query: 603 IQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSET 660
I G GA + +IRQ+S A+I I +P G+T+ + I+G+ AQ LI + SET
Sbjct: 268 IIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVRLSSET 325
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 118/251 (47%), Gaps = 41/251 (16%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T +S+ LRL+V ++Q G L+GKGGC IK
Sbjct: 65 TNAIFKAFAMIIDKL---EEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIP 258
+I D LP +++ + I G ++ + +K I +L++ P+ +IP
Sbjct: 122 EIRESTGAQVQVAGDMLPN---STERAITIAGIPQSIIECVKQICVVMLESPPKG-VTIP 177
Query: 259 GNPTGPSHPL---PDHSVSSQGAPYATGHRDVADIH-LPMPPS-IPKFH-ESGVLDRPKP 312
P S P+ + + QG YA D+ +H L M S P H +G
Sbjct: 178 YRPKPSSSPVIFAGGQAYTIQGQ-YAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESS 236
Query: 313 SPEILTF-------------RLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGT 359
SPE+ + L ++ +G +IG+ GA I ++Q +G IK+ V G+
Sbjct: 237 SPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGS 296
Query: 360 EDRLIVISGPA 370
DR + I+G A
Sbjct: 297 TDRQVTITGSA 307
>gi|427796273|gb|JAA63588.1| Putative polyc-binding alphacp-1, partial [Rhipicephalus
pulchellus]
Length = 510
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 159/372 (42%), Gaps = 83/372 (22%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RL+ + VG +IGK G I+ ++E+G I + + +R++ ++G
Sbjct: 74 LTVRLIMQGKEVGSIIGKKGDNIKKFREESGAKINISDG--SCPERIVTVTGST------ 125
Query: 377 SAPQDAVLRVQTRIARAI---------------PDNREQT----------VMTRLLVASN 411
+A+L+ + IAR P +E V RL+V ++
Sbjct: 126 ----EAILKAFSLIARKFEEMLSLLCLPVQTVGPTLQELQSNGSHLPKPPVTLRLIVPAS 181
Query: 412 QIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQIT 471
Q G L+GKGGS I E+R+++GA I++ + +P + E V ++G EA+ + ++QI
Sbjct: 182 QCGSLIGKGGSKIKEIREVTGASIQV-ASEMLP---NSTERAVTVSGTAEAITKCIYQIC 237
Query: 472 TRLRHHFFRDA-FPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVG 530
+ + A P +P P + F G + + G Y+
Sbjct: 238 CVMMESPPKGATIPYRPKPAMPPVI--------FAGGQAYTVQGQYA------------- 276
Query: 531 GPPPPGSFHPHDDHSAFMHHI---HRPGMPPHMPDMKPWGPQGLMEVGGPMGF-PDFVGP 586
PH D + +H + H P +P H + PQ L + P+
Sbjct: 277 --------IPHPDLTK-LHQLALQHAPLLPGH--SVGAINPQALAALATTNNLRPNTAAA 325
Query: 587 PHRRVP-----VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGT 641
+ +P L+ I G+ G+ + +IRQ+S A I I++ + G+ + + ISGT
Sbjct: 326 AIATASTTTTEMTIPNDLIGCIIGKGGSKINEIRQLSGATIKISNSEEGSKDRTVTISGT 385
Query: 642 PEQTHAAQSLIQ 653
PE + AQ LI
Sbjct: 386 PEAINLAQYLIN 397
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 102/218 (46%), Gaps = 41/218 (18%)
Query: 187 FVLRLLVLSTQVGCLLGKGGCVIKQIDKLPTCAL---------ASDEVVQITGEVDTVRK 237
LRL+V ++Q G L+GKGG IK+I ++ ++ +++ V ++G + + K
Sbjct: 172 VTLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASEMLPNSTERAVTVSGTAEAITK 231
Query: 238 ALKLISHQLLDNSPRDHESIPGNPTGPSHP----LPDHSVSSQGAPYATGHRDVADIH-- 291
+ I ++++ P+ +IP P P+ P + + QG YA H D+ +H
Sbjct: 232 CIYQICCVMMESPPKG-ATIPYRPK-PAMPPVIFAGGQAYTVQGQ-YAIPHPDLTKLHQL 288
Query: 292 -LPMPPSIPKFHESGVLDRPKPSPEILTFR--------------------LLCHDERVGG 330
L P +P H G ++ P+ + T + ++ +G
Sbjct: 289 ALQHAPLLPG-HSVGAIN-PQALAALATTNNLRPNTAAAAIATASTTTTEMTIPNDLIGC 346
Query: 331 VIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
+IGKGG+ I ++Q +G IK+ + G++DR + ISG
Sbjct: 347 IIGKGGSKINEIRQLSGATIKISNSEEGSKDRTVTISG 384
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
Query: 406 LLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQE 465
+ + ++ IGC++GKGGS I E+R+LSGA I+I ++ + V I+G EA+
Sbjct: 337 MTIPNDLIGCIIGKGGSKINEIRQLSGATIKISNSEE-----GSKDRTVTISGTPEAINL 391
Query: 466 ALFQITTRLRHH 477
A + I T + H
Sbjct: 392 AQYLINTSMELH 403
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 82/194 (42%), Gaps = 45/194 (23%)
Query: 184 SSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKLPTCAL------ASDEVVQITGEVDTVRK 237
S +RL++ +VG ++GK G IK+ + + + +V +TG + + K
Sbjct: 71 SVTLTVRLIMQGKEVGSIIGKKGDNIKKFREESGAKINISDGSCPERIVTVTGSTEAILK 130
Query: 238 ALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPS 297
A LI+ + + +P GP+ + S G+ HLP PP
Sbjct: 131 AFSLIARKFEEM--LSLLCLPVQTVGPTL----QELQSNGS------------HLPKPP- 171
Query: 298 IPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVM-EAV 356
+T RL+ + G +IGKGG+ I+ +++ TG I+V E +
Sbjct: 172 -------------------VTLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASEML 212
Query: 357 SGTEDRLIVISGPA 370
+ +R + +SG A
Sbjct: 213 PNSTERAVTVSGTA 226
>gi|363747261|ref|XP_003643959.1| PREDICTED: poly(rC)-binding protein 2-like isoform 1 [Gallus
gallus]
Length = 348
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 95/360 (26%), Positives = 160/360 (44%), Gaps = 52/360 (14%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTNAIFKA 71
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I+ ++ ++ + V RL+V ++Q G L+GKGG I E+R+ +GA
Sbjct: 72 FA--MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPT 493
+++ G D +P + E + I G +++ E + QI + + P P
Sbjct: 130 QVQVAG-DMLP---NSTERAITIAGIPQSIIECVKQICVVM----LESPPKGVTIPYRPK 181
Query: 494 FLDQVSPFPSFIGR-RELSPPGMYSNFGPSFHKFDAVGGPPP-----PGSFH-PHDD--- 543
SP G+ R S Y + PS + GPP G + P D
Sbjct: 182 --PSSSPVIFAGGQDRYSSGSASYPHTAPSMCLNSDLEGPPQEAYTIQGQYAIPQPDLTK 239
Query: 544 -HSAFMHHIHRP---------GMPPHMPDMKP-WGPQGLMEVGGPMGFPDFVGPPHRRVP 592
H M H P G+ P++K WG + H
Sbjct: 240 LHQLAMQQSHFPMSHGNTGFSGIESSSPEVKGYWGLDASAQT-----------TSHE--- 285
Query: 593 VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLI 652
+ +P L+ I G GA + +IRQ+S A+I I +P G+T+ + I+G+ AQ LI
Sbjct: 286 LTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLI 345
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 120/279 (43%), Gaps = 69/279 (24%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T +S+ LRL+V ++Q G L+GKGGC IK
Sbjct: 65 TNAIFKAFAMIIDKL---EEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIP 258
+I D LP +++ + I G ++ + +K I +L++ P+ +IP
Sbjct: 122 EIRESTGAQVQVAGDMLPN---STERAITIAGIPQSIIECVKQICVVMLESPPKG-VTIP 177
Query: 259 GNP-------------------------TGPSHPL-------PDHSVSSQGAPYATGHRD 286
P T PS L P + + QG YA D
Sbjct: 178 YRPKPSSSPVIFAGGQDRYSSGSASYPHTAPSMCLNSDLEGPPQEAYTIQGQ-YAIPQPD 236
Query: 287 VADIH-LPMPPS-IPKFH-ESGVLDRPKPSPEILTF------------RLLCHDERVGGV 331
+ +H L M S P H +G SPE+ + L ++ +G +
Sbjct: 237 LTKLHQLAMQQSHFPMSHGNTGFSGIESSSPEVKGYWGLDASAQTTSHELTIPNDLIGCI 296
Query: 332 IGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPA 370
IG+ GA I ++Q +G IK+ V G+ DR + I+G A
Sbjct: 297 IGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSA 335
Score = 39.3 bits (90), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 396 DNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVL 455
D QT L + ++ IGC++G+ G+ I E+R++SGA I+I P S + +V
Sbjct: 276 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN----PVEGSTDRQVT- 330
Query: 456 INGEFEAVQEALFQITTR 473
I G ++ A + I R
Sbjct: 331 ITGSAASISLAQYLINVR 348
>gi|218193355|gb|EEC75782.1| hypothetical protein OsI_12699 [Oryza sativa Indica Group]
Length = 510
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 96/188 (51%), Gaps = 16/188 (8%)
Query: 318 TFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRIS 377
FR+L ++VG +IG+ G I+ + +E+ IK+++ G +R ++IS PD IS
Sbjct: 109 VFRILIPAQKVGAIIGRKGEFIKKMCEESKARIKILDGPPGVPERTVMISAKDEPDAPIS 168
Query: 378 APQDAVLRVQTRIA------RAIPDNREQTVM-TRLLVASNQIGCLLGKGGSIIAEMRKL 430
D + RV RI P+ V TRLLV ++Q G L+GK G+ I ++
Sbjct: 169 PAMDGLFRVYKRITDGSDGDSGQPERNISNVGPTRLLVPASQAGSLIGKQGATIKSIQDS 228
Query: 431 SGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPL 490
S + +RI+ + +P A ++ VV I GE VQ+AL I + LR ++R +
Sbjct: 229 SKSIVRIV--ETLPLVALNDDRVVEIQGEPVGVQKALESIASHLRKFL-------VDRSV 279
Query: 491 NPTFLDQV 498
P F Q+
Sbjct: 280 LPLFEGQM 287
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 91/216 (42%), Gaps = 60/216 (27%)
Query: 42 FPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNK 101
+PG +FR+L P K+ +IG+ GE + ++ +++ I++ + G ER V+I A D
Sbjct: 104 WPGESVFRILIPAQKVGAIIGRKGEFIKKMCEESKARIKILDGPPGVPERTVMISAKDEP 163
Query: 102 KETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALL 161
+A I S MDGL
Sbjct: 164 -------DAPI----------------------------SPAMDGL-------------F 175
Query: 162 LVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI--------- 212
V++R+ + + + E S+ RLLV ++Q G L+GK G IK I
Sbjct: 176 RVYKRITDGS-DGDSGQPERNISNVGPTRLLVPASQAGSLIGKQGATIKSIQDSSKSIVR 234
Query: 213 --DKLPTCALASDEVVQITGEVDTVRKALKLISHQL 246
+ LP AL D VV+I GE V+KAL+ I+ L
Sbjct: 235 IVETLPLVALNDDRVVEIQGEPVGVQKALESIASHL 270
>gi|443687982|gb|ELT90806.1| hypothetical protein CAPTEDRAFT_1308 [Capitella teleta]
Length = 333
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 154/366 (42%), Gaps = 61/366 (16%)
Query: 316 ILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDR 375
++T R++ + G +IGK G ++ ++++G I + + S +R++ ++G
Sbjct: 1 MVTLRMIMQGKEAGSIIGKKGDNVKKFREDSGAKINISD--SSCPERIVTVTGTT----- 53
Query: 376 ISAPQDAVLRVQTRIARAIPDNREQT----------VMTRLLVASNQIGCLLGKGGSIIA 425
D + + T I + ++ T V RL+V ++Q G L+GKGG+ I
Sbjct: 54 -----DQIFKAFTMICKKFEEDIVNTHNSTTLPKPPVTLRLIVPASQCGSLIGKGGAKIK 108
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDA-FP 484
E+R+L+GA I++ + +P + E V ++G+ +A+ + ++ I + + A P
Sbjct: 109 EIRELTGASIQV-ASEMLP---NSTERAVTVSGQADAITQCIYNICCVMLESPPKGATIP 164
Query: 485 SINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFD-------AVGGPPPP-- 535
+P P + PS G + S G PS V PPP
Sbjct: 165 YRPKPCVPPVM-----LPSSCGGQAFSIQGQQILLPPSHPNATQPDVSPHCVPLPPPCFI 219
Query: 536 ---GSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVP 592
H + ++ PGM M G P P GP
Sbjct: 220 SLRARLQTHSLICIIIRDVY-PGM------------NAAMAAGIPQFAPRQAGPGANMSA 266
Query: 593 ----VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAA 648
+ +P L+ I G GA + +IRQ+S A I I + G+++ + I G+ E HAA
Sbjct: 267 QTHEMTIPNDLIGCIIGRGGAKINEIRQLSGATIKIANADEGSSDRKVTIMGSLETIHAA 326
Query: 649 QSLIQA 654
Q +I A
Sbjct: 327 QYMINA 332
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 88/380 (23%), Positives = 157/380 (41%), Gaps = 81/380 (21%)
Query: 119 GREEASV-ADESDNKK---EDS-----VNEGSVLMDGLNSEKETSKVQKALLLVFERMVE 169
G+E S+ + DN K EDS +++ S + T ++ KA ++ ++
Sbjct: 10 GKEAGSIIGKKGDNVKKFREDSGAKINISDSSCPERIVTVTGTTDQIFKAFTMICKKF-- 67
Query: 170 VEPETEVADQENTKS---SKFVLRLLVLSTQVGCLLGKGGCVIKQIDKLPTCAL------ 220
E ++ + N+ + LRL+V ++Q G L+GKGG IK+I +L ++
Sbjct: 68 ---EEDIVNTHNSTTLPKPPVTLRLIVPASQCGSLIGKGGAKIKEIRELTGASIQVASEM 124
Query: 221 ---ASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPG--NPTGPSHPLPDHSVSS 275
+++ V ++G+ D + + + I +L+ SP +IP P P LP S
Sbjct: 125 LPNSTERAVTVSGQADAITQCIYNICCVMLE-SPPKGATIPYRPKPCVPPVMLPS---SC 180
Query: 276 QGAPYATGHRDVADIHLPMPPSIPKFHESGVLDR--PKPSPEILTFRLLCHDERVGGVIG 333
G ++ + + +PPS P + V P P P ++ R + +I
Sbjct: 181 GGQAFSIQGQQIL-----LPPSHPNATQPDVSPHCVPLPPPCFISLRARLQTHSLICII- 234
Query: 334 KGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARA 393
IR + G + + + R A P +SA QT
Sbjct: 235 -----IRDV--YPGMNAAMAAGIPQFAPRQ------AGPGANMSA--------QTH---- 269
Query: 394 IPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEV 453
+ + ++ IGC++G+GG+ I E+R+LSGA I+I D+ ++
Sbjct: 270 -----------EMTIPNDLIGCIIGRGGAKINEIRQLSGATIKIANADE-----GSSDRK 313
Query: 454 VLINGEFEAVQEALFQITTR 473
V I G E + A + I R
Sbjct: 314 VTIMGSLETIHAAQYMINAR 333
>gi|193083114|ref|NP_001122386.1| poly(rC)-binding protein 2 isoform g [Homo sapiens]
gi|73996231|ref|XP_857798.1| PREDICTED: poly(rC)-binding protein 2 isoform 15 [Canis lupus
familiaris]
gi|291389261|ref|XP_002711067.1| PREDICTED: poly(rC) binding protein 2-like isoform 4 [Oryctolagus
cuniculus]
gi|338726296|ref|XP_003365293.1| PREDICTED: poly(rC)-binding protein 2 [Equus caballus]
gi|426224374|ref|XP_004006346.1| PREDICTED: poly(rC)-binding protein 2 isoform 4 [Ovis aries]
gi|119617117|gb|EAW96711.1| poly(rC) binding protein 2, isoform CRA_f [Homo sapiens]
Length = 318
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 152/349 (43%), Gaps = 55/349 (15%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTNAIFKA 71
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I+ ++ ++ + V RL+V ++Q G L+GKGG I E+R+ +GA
Sbjct: 72 FAM--IIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPT 493
+++ G D +P + E + I G +++ E + QI + + P P
Sbjct: 130 QVQVAG-DMLP---NSTERAITIAGIPQSIIECVKQICVVM----LESPPKGVTIPYRPK 181
Query: 494 FLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHR 553
SP F G + + G Y+ P K H M H
Sbjct: 182 --PSSSPVI-FAGGQAYTIQGQYAIPQPDLTKL-----------------HQLAMQQSHF 221
Query: 554 PGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVP--VVVPRSLVPIIQGEDGACL 611
P G GF + + + +P L+ I G GA +
Sbjct: 222 P------------------MTHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKI 263
Query: 612 KQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSET 660
+IRQ+S A+I I +P G+T+ + I+G+ AQ LI + SET
Sbjct: 264 NEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVRLSSET 312
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 116/238 (48%), Gaps = 28/238 (11%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T +S+ LRL+V ++Q G L+GKGGC IK
Sbjct: 65 TNAIFKAFAMIIDKL---EEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIP 258
+I D LP +++ + I G ++ + +K I +L++ P+ +IP
Sbjct: 122 EIRESTGAQVQVAGDMLPN---STERAITIAGIPQSIIECVKQICVVMLESPPKG-VTIP 177
Query: 259 GNPTGPSHPL---PDHSVSSQGAPYATGHRDVADIH-LPMPPS-IPKFH-ESGVLDRPKP 312
P S P+ + + QG YA D+ +H L M S P H +G
Sbjct: 178 YRPKPSSSPVIFAGGQAYTIQGQ-YAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSAGLDA 236
Query: 313 SPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPA 370
S + + L ++ +G +IG+ GA I ++Q +G IK+ V G+ DR + I+G A
Sbjct: 237 SAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSA 294
>gi|351714348|gb|EHB17267.1| Poly(rC)-binding protein 1 [Heterocephalus glaber]
Length = 355
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 92/366 (25%), Positives = 158/366 (43%), Gaps = 52/366 (14%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 13 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTNAIFKA 70
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I ++ ++ + V RL+V + Q G L+GKGG I E+R+ +GA
Sbjct: 71 FAM--IIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGA 128
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSI-NRPLNP 492
+++ G D +P + E + I G ++V E + QI + + + P P
Sbjct: 129 QVQVAG-DMLP---NSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQP 184
Query: 493 TFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPG-------SFHPHD--- 542
+ SP G+ S Y H + GPP + P D
Sbjct: 185 --MPASSPVICAGGQDRCSDAAGYP------HATHDLEGPPLDAYSIQGQHTISPLDLAK 236
Query: 543 --------DHSAFMH-HIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPV 593
H A MH G+ P++K + + +
Sbjct: 237 LNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGY-------------WASLDASTQTTHEL 283
Query: 594 VVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQ 653
+P +L+ I G GA + +IRQ+S A+I I +P G++ + I+G+ AQ LI
Sbjct: 284 TIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLIN 343
Query: 654 AFVMSE 659
A + SE
Sbjct: 344 ARLSSE 349
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 143/361 (39%), Gaps = 86/361 (23%)
Query: 67 MMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASVA 126
M + +++ VT+ + + G + ++ + ++ K E A I SE N E
Sbjct: 1 MDAGVTEGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERI--- 57
Query: 127 DESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSK 186
+ + G T+ + KA ++ +++ E + + +T +S+
Sbjct: 58 ---------------ITLTG-----PTNAIFKAFAMIIDKL---EEDINSSMTNSTAASR 94
Query: 187 --FVLRLLVLSTQVGCLLGKGGCVIKQI------------DKLPTCALASDEVVQITGEV 232
LRL+V +TQ G L+GKGGC IK+I D LP +++ + I G
Sbjct: 95 PPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPN---STERAITIAGVP 151
Query: 233 DTVRKALK---LISHQLLDNSPRDH-ESIPGNPTGPSHPL-----PDHSVSSQGAPYAT- 282
+V + +K L+ + L SP+ +IP P S P+ D + G P+AT
Sbjct: 152 QSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHATH 211
Query: 283 -------GHRDVADIHLPMPPSIPKFHE--------------SGVLDRPKPSPEI----- 316
+ H P + K ++ +G SPE+
Sbjct: 212 DLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWA 271
Query: 317 -------LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGP 369
T L + +G +IG+ GA I ++Q +G IK+ V G+ R + I+G
Sbjct: 272 SLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGS 331
Query: 370 A 370
A
Sbjct: 332 A 332
>gi|291402366|ref|XP_002717547.1| PREDICTED: poly(rC) binding protein 2-like [Oryctolagus cuniculus]
Length = 334
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 158/358 (44%), Gaps = 57/358 (15%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVK-MREESGARINISEG--NCPERIITLAGPTNAIFKA 70
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I+ ++ ++ + V RL+V ++Q G L+GKGG I E+R+ +GA
Sbjct: 71 FAM--IIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 128
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPT 493
+++ G D +P + E + I G +++ E + QI + + + P P
Sbjct: 129 QVQVAG-DMLP---NSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYWPK 184
Query: 494 FLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHR 553
SP F G + + G Y+ P K H M H
Sbjct: 185 --PSSSPVI-FAGGQAYTIQGQYAIPQPDLTKL-----------------HQLAMQQSHF 224
Query: 554 P---------GMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVP--VVVPRSLVPI 602
P G+ P++K G+ + + + +P L+
Sbjct: 225 PMTHGNTGFSGIESSSPEVK--------------GYWAGLDASAQTTSHELTIPNDLIGC 270
Query: 603 IQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSET 660
I G GA + +IRQ+S A+I I +P G+T+ + I+G+ AQ LI + SET
Sbjct: 271 IIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVRLSSET 328
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 133/310 (42%), Gaps = 37/310 (11%)
Query: 94 VIEASDNKKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKET 153
VIE N T L E G++ SV ++ +++EG+ + T
Sbjct: 5 VIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKMREESGARINISEGNCPERIITLAGPT 64
Query: 154 SKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIKQ 211
+ + KA ++ +++ E + + +T +S+ LRL+V ++Q G L+GKGGC IK+
Sbjct: 65 NAIFKAFAMIIDKL---EEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKE 121
Query: 212 I------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPG 259
I D LP + + I + K + ++ + L SP +IP
Sbjct: 122 IRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPY 181
Query: 260 NPTGPSHPL---PDHSVSSQGAPYATGHRDVADIH-LPMPPS-IPKFH-ESGVLDRPKPS 313
P S P+ + + QG YA D+ +H L M S P H +G S
Sbjct: 182 WPKPSSSPVIFAGGQAYTIQGQ-YAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSS 240
Query: 314 PEILTF-------------RLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTE 360
PE+ + L ++ +G +IG+ GA I ++Q +G IK+ V G+
Sbjct: 241 PEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGST 300
Query: 361 DRLIVISGPA 370
DR + I+G A
Sbjct: 301 DRQVTITGSA 310
>gi|7671433|emb|CAB89374.1| putative protein [Arabidopsis thaliana]
Length = 567
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 88/170 (51%), Gaps = 13/170 (7%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISA 378
++LC +E VI + T I V + ++RL+ I+ D S
Sbjct: 318 LKILCSNESASVVIKT--------RSVTDASISVGDRHPDCDERLVTITAFEKTKDITSE 369
Query: 379 PQDAVLRVQTRI-----ARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
Q A++ V + + A+ + ++ RL+V SNQI CLLG+ G I +++ +GA
Sbjct: 370 SQRALVLVFSNMYENATAKVLDSGLTSSITARLVVRSNQINCLLGEEGRIKTTIQQRTGA 429
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAF 483
+I +L +Q PKC SEN +VV I+GEF V+EA+ Q+T+ LR +F
Sbjct: 430 FITVLNVEQNPKCVSENNQVVQISGEFPNVREAINQVTSMLREDLINQSF 479
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 56/107 (52%), Gaps = 16/107 (14%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCV---- 208
TS+ Q+AL+LVF M E +V D T S RL+V S Q+ CLLG+ G +
Sbjct: 367 TSESQRALVLVFSNMYE-NATAKVLDSGLTSS--ITARLVVRSNQINCLLGEEGRIKTTI 423
Query: 209 ---------IKQIDKLPTCALASDEVVQITGEVDTVRKALKLISHQL 246
+ +++ P C +++VVQI+GE VR+A+ ++ L
Sbjct: 424 QQRTGAFITVLNVEQNPKCVSENNQVVQISGEFPNVREAINQVTSML 470
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 79/195 (40%), Gaps = 42/195 (21%)
Query: 315 EILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA-VSGTEDRLIVISGPAHPD 373
E +TFR+LC+ + G VIGK G +++ L + T I V + + + R+I I G
Sbjct: 28 EYVTFRILCNVSQAGHVIGKHGGMVKKLHKSTESSIWVEKTPLDDSPYRIIKIFGHVGSV 87
Query: 374 DRI-----------------------SAPQDAVLRVQTRIARAIPDNREQTVMTRLLVAS 410
R+ S Q A++RV A D TV LL+
Sbjct: 88 SRVKLGVIVNNVSNREKKEQEQEVEVSRAQYALIRVFE--ALNFGDCTSSTVSCNLLMEG 145
Query: 411 NQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEF---------- 460
+ + ++GK G ++ + + +G I + +I+G +
Sbjct: 146 SHVVTVIGKNGELMQRILEETGC------NSLIKALLFGSSSCRIIHGTYARDKIEGNRL 199
Query: 461 EAVQEALFQITTRLR 475
AV +AL I++RL+
Sbjct: 200 SAVMKALVSISSRLQ 214
>gi|16924113|gb|AAL31692.1|AC092390_13 putative RNA binding protein [Oryza sativa Japonica Group]
gi|108709929|gb|ABF97724.1| KH domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|215695360|dbj|BAG90551.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625405|gb|EEE59537.1| hypothetical protein OsJ_11804 [Oryza sativa Japonica Group]
Length = 510
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 96/188 (51%), Gaps = 16/188 (8%)
Query: 318 TFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRIS 377
FR+L ++VG +IG+ G I+ + +E+ IK+++ G +R ++IS PD IS
Sbjct: 109 VFRILIPAQKVGAIIGRKGEFIKKMCEESKARIKILDGPPGVPERTVMISAKDEPDAPIS 168
Query: 378 APQDAVLRVQTRIA------RAIPDNREQTVM-TRLLVASNQIGCLLGKGGSIIAEMRKL 430
D + RV RI P+ V TRLLV ++Q G L+GK G+ I ++
Sbjct: 169 PAMDGLFRVYKRITDGSDGDSGQPERNISNVGPTRLLVPASQAGSLIGKQGATIKSIQDS 228
Query: 431 SGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPL 490
S + +RI+ + +P A ++ VV I GE VQ+AL I + LR ++R +
Sbjct: 229 SKSIVRIV--ETLPLVALNDDRVVEIQGEPVGVQKALESIASHLRKFL-------VDRSV 279
Query: 491 NPTFLDQV 498
P F Q+
Sbjct: 280 LPLFEGQM 287
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 105/248 (42%), Gaps = 63/248 (25%)
Query: 11 PHDDDNHTEPNGKEKSQ-KLAGDYSENQPSKSFPGGIMFRVLCPVSKIDGVIGKDGEMMS 69
P+ +++ NG+ K Q L + + P +PG +FR+L P K+ +IG+ GE +
Sbjct: 74 PYQEESDNAYNGEVKQQDSLPVEADKKWPG--WPGESVFRILIPAQKVGAIIGRKGEFIK 131
Query: 70 QISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASVADES 129
++ +++ I++ + G ER V+I A D +A I
Sbjct: 132 KMCEESKARIKILDGPPGVPERTVMISAKDEP-------DAPI----------------- 167
Query: 130 DNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVL 189
S MDGL V++R+ + + + E S+
Sbjct: 168 -----------SPAMDGL-------------FRVYKRITDGS-DGDSGQPERNISNVGPT 202
Query: 190 RLLVLSTQVGCLLGKGGCVIKQI-----------DKLPTCALASDEVVQITGEVDTVRKA 238
RLLV ++Q G L+GK G IK I + LP AL D VV+I GE V+KA
Sbjct: 203 RLLVPASQAGSLIGKQGATIKSIQDSSKSIVRIVETLPLVALNDDRVVEIQGEPVGVQKA 262
Query: 239 LKLISHQL 246
L+ I+ L
Sbjct: 263 LESIASHL 270
>gi|297601352|ref|NP_001050707.2| Os03g0627500 [Oryza sativa Japonica Group]
gi|255674723|dbj|BAF12621.2| Os03g0627500, partial [Oryza sativa Japonica Group]
Length = 512
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 96/188 (51%), Gaps = 16/188 (8%)
Query: 318 TFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRIS 377
FR+L ++VG +IG+ G I+ + +E+ IK+++ G +R ++IS PD IS
Sbjct: 111 VFRILIPAQKVGAIIGRKGEFIKKMCEESKARIKILDGPPGVPERTVMISAKDEPDAPIS 170
Query: 378 APQDAVLRVQTRIA------RAIPDNREQTVM-TRLLVASNQIGCLLGKGGSIIAEMRKL 430
D + RV RI P+ V TRLLV ++Q G L+GK G+ I ++
Sbjct: 171 PAMDGLFRVYKRITDGSDGDSGQPERNISNVGPTRLLVPASQAGSLIGKQGATIKSIQDS 230
Query: 431 SGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPL 490
S + +RI+ + +P A ++ VV I GE VQ+AL I + LR ++R +
Sbjct: 231 SKSIVRIV--ETLPLVALNDDRVVEIQGEPVGVQKALESIASHLRKFL-------VDRSV 281
Query: 491 NPTFLDQV 498
P F Q+
Sbjct: 282 LPLFEGQM 289
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 105/249 (42%), Gaps = 63/249 (25%)
Query: 10 RPHDDDNHTEPNGKEKSQ-KLAGDYSENQPSKSFPGGIMFRVLCPVSKIDGVIGKDGEMM 68
P+ +++ NG+ K Q L + + P +PG +FR+L P K+ +IG+ GE +
Sbjct: 75 NPYQEESDNAYNGEVKQQDSLPVEADKKWPG--WPGESVFRILIPAQKVGAIIGRKGEFI 132
Query: 69 SQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASVADE 128
++ +++ I++ + G ER V+I A D +A I
Sbjct: 133 KKMCEESKARIKILDGPPGVPERTVMISAKDEP-------DAPI---------------- 169
Query: 129 SDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSKFV 188
S MDGL V++R+ + + + E S+
Sbjct: 170 ------------SPAMDGL-------------FRVYKRITDGS-DGDSGQPERNISNVGP 203
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQI-----------DKLPTCALASDEVVQITGEVDTVRK 237
RLLV ++Q G L+GK G IK I + LP AL D VV+I GE V+K
Sbjct: 204 TRLLVPASQAGSLIGKQGATIKSIQDSSKSIVRIVETLPLVALNDDRVVEIQGEPVGVQK 263
Query: 238 ALKLISHQL 246
AL+ I+ L
Sbjct: 264 ALESIASHL 272
>gi|356530005|ref|XP_003533576.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 385
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 96/378 (25%), Positives = 158/378 (41%), Gaps = 109/378 (28%)
Query: 9 KRPHDDDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIMFRVLCPVSKIDGVIGKDGEMM 68
KR DD+N + E+S A ++ Q ++FR++ P +I VIGK+G +
Sbjct: 75 KRRRDDENSGTASAPEQS---AAKRAKGQ-------DVIFRIVVPSRQIGKVIGKEGHRI 124
Query: 69 SQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASVADE 128
+I +DT TI++ + ++ +ER+++I + DN ++ ++ +A + + +E+ S D
Sbjct: 125 QKIREDTKATIKIADAIARHEERVIIISSKDNDEKVTDAEKALEQIAHLILKEDDSSLDA 184
Query: 129 SDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSKFV 188
S V G V +
Sbjct: 185 S------KVTAGHVAAN------------------------------------------T 196
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQI-------------DKLPTCALA--SDEVVQITGEVD 233
+RLL+ +Q G L+G G I+++ ++LP CA A SD VVQ++G+V
Sbjct: 197 IRLLIAGSQAGGLIGMSGQNIEKLRDSSGASITVLAPNQLPLCASAHESDRVVQLSGDVP 256
Query: 234 TVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLP 293
V KAL+ I QL +N PR SI +PT YA
Sbjct: 257 AVMKALEEIGCQLRENPPRQVISI--SPT---------------YNYAA----------- 288
Query: 294 MPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVM 353
+ PS P + V + +TF +L + VGG+IG+ G+ I ++ E+G IKV
Sbjct: 289 IRPSQPYLDPTSV--------DYVTFEMLISETMVGGLIGRCGSNISRIRNESGAMIKVY 340
Query: 354 EAVSGTEDRLIVISGPAH 371
+ R I G A
Sbjct: 341 GGKGEQKHRQIQFGGSAQ 358
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 116/205 (56%), Gaps = 23/205 (11%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
+ FR++ ++G VIGK G I+ ++++T IK+ +A++ E+R+I+IS + D+++
Sbjct: 102 VIFRIVVPSRQIGKVIGKEGHRIQKIREDTKATIKIADAIARHEERVIIISSKDN-DEKV 160
Query: 377 SAPQDAVLRVQTRIARAIPDNREQTVMT---------RLLVASNQIGCLLGKGGSIIAEM 427
+ + A+ ++ I + + + + +T RLL+A +Q G L+G G I ++
Sbjct: 161 TDAEKALEQIAHLILKEDDSSLDASKVTAGHVAANTIRLLIAGSQAGGLIGMSGQNIEKL 220
Query: 428 RKLSGAYIRILGKDQIPKCAS--ENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAF-- 483
R SGA I +L +Q+P CAS E++ VV ++G+ AV +AL +I +LR + R
Sbjct: 221 RDSSGASITVLAPNQLPLCASAHESDRVVQLSGDVPAVMKALEEIGCQLRENPPRQVISI 280
Query: 484 -PSIN----RP----LNPTFLDQVS 499
P+ N RP L+PT +D V+
Sbjct: 281 SPTYNYAAIRPSQPYLDPTSVDYVT 305
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 62/152 (40%), Gaps = 36/152 (23%)
Query: 318 TFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI- 376
T RLL + GG+IG G I L+ +G I V+ + + AH DR+
Sbjct: 196 TIRLLIAGSQAGGLIGMSGQNIEKLRDSSGASITVLAP------NQLPLCASAHESDRVV 249
Query: 377 --SAPQDAVLRVQTRIARAIPDNREQTVMT---------------------------RLL 407
S AV++ I + +N + V++ +L
Sbjct: 250 QLSGDVPAVMKALEEIGCQLRENPPRQVISISPTYNYAAIRPSQPYLDPTSVDYVTFEML 309
Query: 408 VASNQIGCLLGKGGSIIAEMRKLSGAYIRILG 439
++ +G L+G+ GS I+ +R SGA I++ G
Sbjct: 310 ISETMVGGLIGRCGSNISRIRNESGAMIKVYG 341
>gi|390458234|ref|XP_003732080.1| PREDICTED: poly(rC)-binding protein 1-like [Callithrix jacchus]
Length = 349
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 158/365 (43%), Gaps = 52/365 (14%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTNAIFKA 71
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I ++ ++ + V RL+V + Q G L+GKGG I E+RK +GA
Sbjct: 72 FAM--IIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRKSTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSI-NRPLNP 492
+++ G D +P + E+ + I G ++V E + QI + + + P P
Sbjct: 130 QVQVAG-DMLP---NSTEQAITIAGMPQSVTECVKQICLVMLETISQSPQGRVMTIPYQP 185
Query: 493 TFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPG-------SFHP----- 540
+ SP G+ YSN H + GPP + P
Sbjct: 186 --MPASSPVICAGGQDR------YSNTAGYPHATHDLEGPPLDAYSIQGQHTISPLHLAN 237
Query: 541 ------HDDHSAFMH-HIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPV 593
H A MH G+ + P++K + + +
Sbjct: 238 LNQVARQQSHFAMMHGGTGFAGIDSNSPEVKGY-------------WASLDASTQTTHEL 284
Query: 594 VVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQ 653
+P +L+ I G G + +IRQ+S A+I I +P G++ + I+G+ AQ LI
Sbjct: 285 TIPNNLIGCIIGRQGTNINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLIN 344
Query: 654 AFVMS 658
A + S
Sbjct: 345 AKLSS 349
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 117/275 (42%), Gaps = 63/275 (22%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T +S+ LRL+V +TQ G L+GKGGC IK
Sbjct: 65 TNAIFKAFAMIIDKL---EEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIK 121
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDN---SPRDH- 254
+I D LP ++++ + I G +V + +K I +L+ SP+
Sbjct: 122 EIRKSTGAQVQVAGDMLPN---STEQAITIAGMPQSVTECVKQICLVMLETISQSPQGRV 178
Query: 255 ESIPGNPTGPSHPL-----PDHSVSSQGAPYAT--------------GHRDVADIHLPMP 295
+IP P S P+ D ++ G P+AT G ++ +HL
Sbjct: 179 MTIPYQPMPASSPVICAGGQDRYSNTAGYPHATHDLEGPPLDAYSIQGQHTISPLHLANL 238
Query: 296 PSIPKFHE--------SGVLDRPKPSPEI------------LTFRLLCHDERVGGVIGKG 335
+ + +G SPE+ T L + +G +IG+
Sbjct: 239 NQVARQQSHFAMMHGGTGFAGIDSNSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQ 298
Query: 336 GAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPA 370
G I ++Q +G IK+ V G+ R + I+G A
Sbjct: 299 GTNINEIRQMSGAQIKIANPVEGSSGRQVTITGSA 333
>gi|6754994|ref|NP_035995.1| poly(rC)-binding protein 1 [Mus musculus]
gi|62751650|ref|NP_001015565.1| poly(rC)-binding protein 1 [Bos taurus]
gi|126723096|ref|NP_001075593.1| poly(rC)-binding protein 1 [Oryctolagus cuniculus]
gi|222352151|ref|NP_006187.2| poly(rC)-binding protein 1 [Homo sapiens]
gi|379642963|ref|NP_001243850.1| poly(rC)-binding protein 1 [Equus caballus]
gi|114577924|ref|XP_515530.2| PREDICTED: poly(rC)-binding protein 1 isoform 3 [Pan troglodytes]
gi|296223628|ref|XP_002757702.1| PREDICTED: poly(rC)-binding protein 1-like [Callithrix jacchus]
gi|297667414|ref|XP_002811975.1| PREDICTED: poly(rC)-binding protein 1 isoform 1 [Pongo abelii]
gi|301758216|ref|XP_002914950.1| PREDICTED: poly(rC)-binding protein 1-like [Ailuropoda melanoleuca]
gi|332226765|ref|XP_003262561.1| PREDICTED: poly(rC)-binding protein 1 [Nomascus leucogenys]
gi|348566575|ref|XP_003469077.1| PREDICTED: poly(rC)-binding protein 1-like [Cavia porcellus]
gi|354491739|ref|XP_003508012.1| PREDICTED: poly(rC)-binding protein 1-like [Cricetulus griseus]
gi|395731716|ref|XP_003775951.1| PREDICTED: poly(rC)-binding protein 1 isoform 2 [Pongo abelii]
gi|395841306|ref|XP_003793486.1| PREDICTED: poly(rC)-binding protein 1 [Otolemur garnettii]
gi|402891162|ref|XP_003908824.1| PREDICTED: poly(rC)-binding protein 1 [Papio anubis]
gi|410954989|ref|XP_003984141.1| PREDICTED: poly(rC)-binding protein 1 [Felis catus]
gi|426223390|ref|XP_004005858.1| PREDICTED: poly(rC)-binding protein 1 [Ovis aries]
gi|426335835|ref|XP_004029412.1| PREDICTED: poly(rC)-binding protein 1 [Gorilla gorilla gorilla]
gi|12230408|sp|O19048.1|PCBP1_RABIT RecName: Full=Poly(rC)-binding protein 1; AltName: Full=Alpha-CP1;
AltName: Full=Heterogeneous nuclear ribonucleoprotein
E1; Short=hnRNP E1
gi|42559420|sp|P60335.1|PCBP1_MOUSE RecName: Full=Poly(rC)-binding protein 1; AltName: Full=Alpha-CP1;
AltName: Full=Heterogeneous nuclear ribonucleoprotein
E1; Short=hnRNP E1
gi|42560548|sp|Q15365.2|PCBP1_HUMAN RecName: Full=Poly(rC)-binding protein 1; AltName: Full=Alpha-CP1;
AltName: Full=Heterogeneous nuclear ribonucleoprotein
E1; Short=hnRNP E1; AltName: Full=Nucleic acid-binding
protein SUB2.3
gi|75040221|sp|Q5E9A3.1|PCBP1_BOVIN RecName: Full=Poly(rC)-binding protein 1; AltName: Full=Alpha-CP1
gi|2134737|pir||S58529 alpha-complex protein 1 - human
gi|5805273|gb|AAD51920.1|AF139894_1 RNA-binding protein alpha-CP1 [Mus musculus]
gi|5805275|gb|AAD51921.1|AF139895_1 RNA-binding protein alpha-CP1 [Mus musculus]
gi|1215671|gb|AAA91317.1| alpha-CP1 [Homo sapiens]
gi|2644966|emb|CAA05814.1| hnRNP-E1 protein [Oryctolagus cuniculus]
gi|13435897|gb|AAH04793.1| Poly(rC) binding protein 1 [Mus musculus]
gi|24980783|gb|AAH39742.1| Poly(rC) binding protein 1 [Homo sapiens]
gi|47124405|gb|AAH69915.1| Poly(rC) binding protein 1 [Mus musculus]
gi|59858399|gb|AAX09034.1| poly(rC) binding protein 1 [Bos taurus]
gi|62702265|gb|AAX93191.1| unknown [Homo sapiens]
gi|119620240|gb|EAW99834.1| poly(rC) binding protein 1 [Homo sapiens]
gi|148666767|gb|EDK99183.1| mCG130511 [Mus musculus]
gi|189054893|dbj|BAG36897.1| unnamed protein product [Homo sapiens]
gi|208968661|dbj|BAG74169.1| poly(rC) binding protein 1 [synthetic construct]
gi|281346699|gb|EFB22283.1| hypothetical protein PANDA_002891 [Ailuropoda melanoleuca]
gi|296482414|tpg|DAA24529.1| TPA: poly(rC)-binding protein 1 [Bos taurus]
gi|312151908|gb|ADQ32466.1| poly(rC) binding protein 1 [synthetic construct]
gi|344250809|gb|EGW06913.1| Poly(rC)-binding protein 1 [Cricetulus griseus]
gi|355565760|gb|EHH22189.1| hypothetical protein EGK_05412 [Macaca mulatta]
gi|355751386|gb|EHH55641.1| hypothetical protein EGM_04885 [Macaca fascicularis]
gi|380813262|gb|AFE78505.1| poly(rC)-binding protein 1 [Macaca mulatta]
gi|380813264|gb|AFE78506.1| poly(rC)-binding protein 1 [Macaca mulatta]
gi|383418769|gb|AFH32598.1| poly(rC)-binding protein 1 [Macaca mulatta]
gi|384940310|gb|AFI33760.1| poly(rC)-binding protein 1 [Macaca mulatta]
gi|384947378|gb|AFI37294.1| poly(rC)-binding protein 1 [Macaca mulatta]
gi|410262902|gb|JAA19417.1| poly(rC) binding protein 1 [Pan troglodytes]
gi|431912608|gb|ELK14626.1| Poly(rC)-binding protein 1 [Pteropus alecto]
gi|444723406|gb|ELW64063.1| Poly(rC)-binding protein 1 [Tupaia chinensis]
Length = 356
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 92/366 (25%), Positives = 158/366 (43%), Gaps = 52/366 (14%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTNAIFKA 71
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I ++ ++ + V RL+V + Q G L+GKGG I E+R+ +GA
Sbjct: 72 FAM--IIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSI-NRPLNP 492
+++ G D +P + E + I G ++V E + QI + + + P P
Sbjct: 130 QVQVAG-DMLP---NSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQP 185
Query: 493 TFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPG-------SFHPHD--- 542
+ SP G+ S Y H + GPP + P D
Sbjct: 186 --MPASSPVICAGGQDRCSDAAGYP------HATHDLEGPPLDAYSIQGQHTISPLDLAK 237
Query: 543 --------DHSAFMH-HIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPV 593
H A MH G+ P++K + + +
Sbjct: 238 LNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGY-------------WASLDASTQTTHEL 284
Query: 594 VVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQ 653
+P +L+ I G GA + +IRQ+S A+I I +P G++ + I+G+ AQ LI
Sbjct: 285 TIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLIN 344
Query: 654 AFVMSE 659
A + SE
Sbjct: 345 ARLSSE 350
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 115/275 (41%), Gaps = 63/275 (22%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T +S+ LRL+V +TQ G L+GKGGC IK
Sbjct: 65 TNAIFKAFAMIIDKL---EEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIK 121
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALK---LISHQLLDNSPRDH- 254
+I D LP +++ + I G +V + +K L+ + L SP+
Sbjct: 122 EIRESTGAQVQVAGDMLPN---STERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRV 178
Query: 255 ESIPGNPTGPSHPL-----PDHSVSSQGAPYAT--------GHRDVADIHLPMPPSIPKF 301
+IP P S P+ D + G P+AT + H P + K
Sbjct: 179 MTIPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKL 238
Query: 302 HE--------------SGVLDRPKPSPEI------------LTFRLLCHDERVGGVIGKG 335
++ +G SPE+ T L + +G +IG+
Sbjct: 239 NQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQ 298
Query: 336 GAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPA 370
GA I ++Q +G IK+ V G+ R + I+G A
Sbjct: 299 GANINEIRQMSGAQIKIANPVEGSSGRQVTITGSA 333
>gi|410227970|gb|JAA11204.1| poly(rC) binding protein 1 [Pan troglodytes]
Length = 356
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 158/360 (43%), Gaps = 40/360 (11%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTNAIFKA 71
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I ++ ++ + V RL+V + Q G L+GKGG I E+R+ +GA
Sbjct: 72 FAM--IIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSI-NRPLNP 492
+++ G D +P + E + I G ++V E + QI + + + P P
Sbjct: 130 QVQVAG-DMLP---NSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQP 185
Query: 493 TFLDQVSPFPSFIGRRELSPPGMYSNF-----GPSFHKFDAVG----GPPPPGSFHP--- 540
+ SP G+ S Y + GP + G P +
Sbjct: 186 --MPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKLNQVAR 243
Query: 541 HDDHSAFMH-HIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSL 599
H A MH G+ P++K + G H + +P +L
Sbjct: 244 QQSHFAMMHGGTGFAGIDSSSPEVKGYWA----------GLDASTQTTHE---LTIPNNL 290
Query: 600 VPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
+ I G GA + +IRQ+S A+I I +P G++ + I+G+ AQ LI A + SE
Sbjct: 291 IGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLINARLSSE 350
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 115/275 (41%), Gaps = 63/275 (22%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T +S+ LRL+V +TQ G L+GKGGC IK
Sbjct: 65 TNAIFKAFAMIIDKL---EEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIK 121
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALK---LISHQLLDNSPRDH- 254
+I D LP +++ + I G +V + +K L+ + L SP+
Sbjct: 122 EIRESTGAQVQVAGDMLPN---STERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRV 178
Query: 255 ESIPGNPTGPSHPL-----PDHSVSSQGAPYAT--------GHRDVADIHLPMPPSIPKF 301
+IP P S P+ D + G P+AT + H P + K
Sbjct: 179 MTIPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKL 238
Query: 302 HE--------------SGVLDRPKPSPEI------------LTFRLLCHDERVGGVIGKG 335
++ +G SPE+ T L + +G +IG+
Sbjct: 239 NQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWAGLDASTQTTHELTIPNNLIGCIIGRQ 298
Query: 336 GAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPA 370
GA I ++Q +G IK+ V G+ R + I+G A
Sbjct: 299 GANINEIRQMSGAQIKIANPVEGSSGRQVTITGSA 333
>gi|417410101|gb|JAA51528.1| Putative polyc-binding alphacp-1, partial [Desmodus rotundus]
Length = 365
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 158/364 (43%), Gaps = 48/364 (13%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 23 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTNAIFKA 80
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I ++ ++ + V RL+V + Q G L+GKGG I E+R+ +GA
Sbjct: 81 FAM--IIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGA 138
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSI-NRPLNP 492
+++ G D +P + E + I G ++V E + QI + + + P P
Sbjct: 139 QVQVAG-DMLP---NSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQP 194
Query: 493 TFLDQVSPFPSFIGRRELSPPGMYSNF-----GPSFHKFDAVGGPPPPGSFHPHD----- 542
+ SP G+ S Y + GP + G + P D
Sbjct: 195 --MPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQG----QHTISPLDLAKLN 248
Query: 543 ------DHSAFMH-HIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVV 595
H A MH G+ P++K + + + +
Sbjct: 249 QVARQQSHFAMMHGGTGFAGIDSSSPEVKGY-------------WASLDASTQTTHELTI 295
Query: 596 PRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAF 655
P +L+ I G GA + +IRQ+S A+I I +P G++ + I+G+ AQ LI A
Sbjct: 296 PNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLINAR 355
Query: 656 VMSE 659
+ SE
Sbjct: 356 LSSE 359
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 115/275 (41%), Gaps = 63/275 (22%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T +S+ LRL+V +TQ G L+GKGGC IK
Sbjct: 74 TNAIFKAFAMIIDKL---EEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIK 130
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALK---LISHQLLDNSPRDH- 254
+I D LP +++ + I G +V + +K L+ + L SP+
Sbjct: 131 EIRESTGAQVQVAGDMLPN---STERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRV 187
Query: 255 ESIPGNPTGPSHPL-----PDHSVSSQGAPYAT--------GHRDVADIHLPMPPSIPKF 301
+IP P S P+ D + G P+AT + H P + K
Sbjct: 188 MTIPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKL 247
Query: 302 HE--------------SGVLDRPKPSPEI------------LTFRLLCHDERVGGVIGKG 335
++ +G SPE+ T L + +G +IG+
Sbjct: 248 NQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQ 307
Query: 336 GAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPA 370
GA I ++Q +G IK+ V G+ R + I+G A
Sbjct: 308 GANINEIRQMSGAQIKIANPVEGSSGRQVTITGSA 342
>gi|108709930|gb|ABF97725.1| KH domain containing protein, expressed [Oryza sativa Japonica
Group]
Length = 389
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 96/188 (51%), Gaps = 16/188 (8%)
Query: 318 TFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRIS 377
FR+L ++VG +IG+ G I+ + +E+ IK+++ G +R ++IS PD IS
Sbjct: 109 VFRILIPAQKVGAIIGRKGEFIKKMCEESKARIKILDGPPGVPERTVMISAKDEPDAPIS 168
Query: 378 APQDAVLRVQTRIA------RAIPDNREQTVM-TRLLVASNQIGCLLGKGGSIIAEMRKL 430
D + RV RI P+ V TRLLV ++Q G L+GK G+ I ++
Sbjct: 169 PAMDGLFRVYKRITDGSDGDSGQPERNISNVGPTRLLVPASQAGSLIGKQGATIKSIQDS 228
Query: 431 SGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPL 490
S + +RI+ + +P A ++ VV I GE VQ+AL I + LR ++R +
Sbjct: 229 SKSIVRIV--ETLPLVALNDDRVVEIQGEPVGVQKALESIASHLRKFL-------VDRSV 279
Query: 491 NPTFLDQV 498
P F Q+
Sbjct: 280 LPLFEGQM 287
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 105/248 (42%), Gaps = 63/248 (25%)
Query: 11 PHDDDNHTEPNGKEKSQ-KLAGDYSENQPSKSFPGGIMFRVLCPVSKIDGVIGKDGEMMS 69
P+ +++ NG+ K Q L + + P +PG +FR+L P K+ +IG+ GE +
Sbjct: 74 PYQEESDNAYNGEVKQQDSLPVEADKKWPG--WPGESVFRILIPAQKVGAIIGRKGEFIK 131
Query: 70 QISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASVADES 129
++ +++ I++ + G ER V+I A D +A I
Sbjct: 132 KMCEESKARIKILDGPPGVPERTVMISAKDEP-------DAPI----------------- 167
Query: 130 DNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVL 189
S MDGL V++R+ + + + E S+
Sbjct: 168 -----------SPAMDGL-------------FRVYKRITDGS-DGDSGQPERNISNVGPT 202
Query: 190 RLLVLSTQVGCLLGKGGCVIKQI-----------DKLPTCALASDEVVQITGEVDTVRKA 238
RLLV ++Q G L+GK G IK I + LP AL D VV+I GE V+KA
Sbjct: 203 RLLVPASQAGSLIGKQGATIKSIQDSSKSIVRIVETLPLVALNDDRVVEIQGEPVGVQKA 262
Query: 239 LKLISHQL 246
L+ I+ L
Sbjct: 263 LESIASHL 270
>gi|410355313|gb|JAA44260.1| poly(rC) binding protein 1 [Pan troglodytes]
Length = 356
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 92/366 (25%), Positives = 158/366 (43%), Gaps = 52/366 (14%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTNAIFKA 71
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I ++ ++ + V RL+V + Q G L+GKGG I E+R+ +GA
Sbjct: 72 FAM--IIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSI-NRPLNP 492
+++ G D +P + E + I G ++V E + QI + + + P P
Sbjct: 130 QVQVAG-DMLP---NSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQP 185
Query: 493 TFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPG-------SFHPHD--- 542
+ SP G+ S Y H + GPP + P D
Sbjct: 186 --MPASSPVICAGGQDRCSDAAGYP------HATHDLEGPPLDAYSIQGQHTISPLDLAK 237
Query: 543 --------DHSAFMH-HIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPV 593
H A MH G+ P++K + + +
Sbjct: 238 LNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGY-------------WASLDASTQTTHEL 284
Query: 594 VVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQ 653
+P +L+ I G GA + +IRQ+S A+I I +P G++ + I+G+ AQ LI
Sbjct: 285 TIPNNLIGYIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLIN 344
Query: 654 AFVMSE 659
A + SE
Sbjct: 345 ARLSSE 350
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 115/275 (41%), Gaps = 63/275 (22%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T +S+ LRL+V +TQ G L+GKGGC IK
Sbjct: 65 TNAIFKAFAMIIDKL---EEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIK 121
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALK---LISHQLLDNSPRDH- 254
+I D LP +++ + I G +V + +K L+ + L SP+
Sbjct: 122 EIRESTGAQVQVAGDMLPN---STERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRV 178
Query: 255 ESIPGNPTGPSHPL-----PDHSVSSQGAPYAT--------GHRDVADIHLPMPPSIPKF 301
+IP P S P+ D + G P+AT + H P + K
Sbjct: 179 MTIPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKL 238
Query: 302 HE--------------SGVLDRPKPSPEI------------LTFRLLCHDERVGGVIGKG 335
++ +G SPE+ T L + +G +IG+
Sbjct: 239 NQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGYIIGRQ 298
Query: 336 GAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPA 370
GA I ++Q +G IK+ V G+ R + I+G A
Sbjct: 299 GANINEIRQMSGAQIKIANPVEGSSGRQVTITGSA 333
>gi|357157425|ref|XP_003577794.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 527
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 95/188 (50%), Gaps = 16/188 (8%)
Query: 318 TFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRIS 377
FR+L ++VG VIG+ G I+ + +E+ IK+++ G +R ++IS PD +S
Sbjct: 127 VFRVLVPVQKVGAVIGRKGEFIKKMCEESRARIKILDGPPGVPERAVMISAKDEPDALVS 186
Query: 378 APQDAVLRVQTRIARAIPDNREQTVM-------TRLLVASNQIGCLLGKGGSIIAEMRKL 430
D +LRV RI + +Q TRLLV ++Q G L+GK G+ I ++
Sbjct: 187 PAVDGLLRVHKRITDGLDSETDQPQRGAGPVGPTRLLVPASQAGSLIGKQGATIKSIQDA 246
Query: 431 SGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPL 490
S +RIL + +P A ++ VV I GE V +A+ I + LR ++R +
Sbjct: 247 SKCALRIL--ENVPPVALNDDRVVEIQGEPLDVHKAVELIASHLRKFL-------VDRSV 297
Query: 491 NPTFLDQV 498
P F Q+
Sbjct: 298 LPLFEAQM 305
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 102/241 (42%), Gaps = 70/241 (29%)
Query: 22 GKEKSQKLAGDYSENQPSKSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRV 81
G+ ++++LA +E++ +PG +FRVL PV K+ VIG+ GE + ++ +++ I++
Sbjct: 102 GEAEAEQLANVETEDKKWPGWPGESVFRVLVPVQKVGAVIGRKGEFIKKMCEESRARIKI 161
Query: 82 EETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGS 141
+ G ER V+I S DE D +V+
Sbjct: 162 LDGPPGVPERAVMI----------------------------SAKDEPDALVSPAVD--- 190
Query: 142 VLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSKFV-----LRLLVLST 196
LL V +R+ T+ D E + + RLLV ++
Sbjct: 191 -----------------GLLRVHKRI------TDGLDSETDQPQRGAGPVGPTRLLVPAS 227
Query: 197 QVGCLLGKGGCVIKQI-----------DKLPTCALASDEVVQITGEVDTVRKALKLISHQ 245
Q G L+GK G IK I + +P AL D VV+I GE V KA++LI+
Sbjct: 228 QAGSLIGKQGATIKSIQDASKCALRILENVPPVALNDDRVVEIQGEPLDVHKAVELIASH 287
Query: 246 L 246
L
Sbjct: 288 L 288
>gi|193083110|ref|NP_001122384.1| poly(rC)-binding protein 2 isoform e [Homo sapiens]
gi|291389255|ref|XP_002711064.1| PREDICTED: poly(rC) binding protein 2-like isoform 1 [Oryctolagus
cuniculus]
gi|348581079|ref|XP_003476305.1| PREDICTED: poly(rC)-binding protein 2 isoform 3 [Cavia porcellus]
gi|184186908|gb|ACC69194.1| poly(rC) binding protein 2 [Mus musculus]
gi|208967068|dbj|BAG73548.1| poly(rC) binding protein 2 [synthetic construct]
Length = 361
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 164/370 (44%), Gaps = 54/370 (14%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTNAIFKA 71
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I+ ++ ++ + V RL+V ++Q G L+GKGG I E+R+ +GA
Sbjct: 72 FA--MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPT 493
+++ G D +P + E + I G +++ E + QI + + P P
Sbjct: 130 QVQVAG-DMLP---NSTERAITIAGIPQSIIECVKQICVVM----LESPPKGVTIPYRPK 181
Query: 494 FLDQVSPFPSFIGRRELSPPGMYSNF---GPSFHKFDAVGGPPP-----PGSFH-PHDD- 543
SP G+ S ++F PS + GPP G + P D
Sbjct: 182 --PSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDL 239
Query: 544 ---HSAFMHHIHRP---------GMPPHMPDMKP-WGPQGLMEVGGPMGFPDFVGPPHRR 590
H M H P G+ P++K WG + H
Sbjct: 240 TKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWGLDASAQT-----------TSHE- 287
Query: 591 VPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQS 650
+ +P L+ I G GA + +IRQ+S A+I I +P G+T+ + I+G+ AQ
Sbjct: 288 --LTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQY 345
Query: 651 LIQAFVMSET 660
LI + SET
Sbjct: 346 LINVRLSSET 355
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 118/282 (41%), Gaps = 73/282 (25%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T +S+ LRL+V ++Q G L+GKGGC IK
Sbjct: 65 TNAIFKAFAMIIDKL---EEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPR------ 252
+I D LP +++ + I G ++ + +K I +L++ P+
Sbjct: 122 EIRESTGAQVQVAGDMLPN---STERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPY 178
Query: 253 ----------------------DHESIPG-------NPTGPSHPLPDHSVSSQGAPYATG 283
D S P NP PL +++ Q YA
Sbjct: 179 RPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQ---YAIP 235
Query: 284 HRDVADIH-LPMPPS-IPKFH-ESGVLDRPKPSPEILTF------------RLLCHDERV 328
D+ +H L M S P H +G SPE+ + L ++ +
Sbjct: 236 QPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWGLDASAQTTSHELTIPNDLI 295
Query: 329 GGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPA 370
G +IG+ GA I ++Q +G IK+ V G+ DR + I+G A
Sbjct: 296 GCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSA 337
>gi|62087230|dbj|BAD92062.1| poly(rC)-binding protein 2 isoform b variant [Homo sapiens]
Length = 373
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 164/370 (44%), Gaps = 54/370 (14%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 26 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTNAIFKA 83
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I+ ++ ++ + V RL+V ++Q G L+GKGG I E+R+ +GA
Sbjct: 84 FA--MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 141
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPT 493
+++ G D +P + E + I G +++ E + QI + + P P
Sbjct: 142 QVQVAG-DMLP---NSTERAITIAGIPQSIIECVKQICVVM----LESPPKGVTIPYRPK 193
Query: 494 FLDQVSPFPSFIGRRELSPPGMYSNF---GPSFHKFDAVGGPPP-----PGSFH-PHDD- 543
SP G+ S ++F PS + GPP G + P D
Sbjct: 194 --PSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDL 251
Query: 544 ---HSAFMHHIHRP---------GMPPHMPDMKP-WGPQGLMEVGGPMGFPDFVGPPHRR 590
H M H P G+ P++K WG + H
Sbjct: 252 TKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWGLDASAQT-----------TSHE- 299
Query: 591 VPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQS 650
+ +P L+ I G GA + +IRQ+S A+I I +P G+T+ + I+G+ AQ
Sbjct: 300 --LTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQY 357
Query: 651 LIQAFVMSET 660
LI + SET
Sbjct: 358 LINVRLSSET 367
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 118/282 (41%), Gaps = 73/282 (25%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T +S+ LRL+V ++Q G L+GKGGC IK
Sbjct: 77 TNAIFKAFAMIIDKL---EEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 133
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPR------ 252
+I D LP +++ + I G ++ + +K I +L++ P+
Sbjct: 134 EIRESTGAQVQVAGDMLPN---STERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPY 190
Query: 253 ----------------------DHESIPG-------NPTGPSHPLPDHSVSSQGAPYATG 283
D S P NP PL +++ Q YA
Sbjct: 191 RPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQ---YAIP 247
Query: 284 HRDVADIH-LPMPPS-IPKFH-ESGVLDRPKPSPEILTF------------RLLCHDERV 328
D+ +H L M S P H +G SPE+ + L ++ +
Sbjct: 248 QPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWGLDASAQTTSHELTIPNDLI 307
Query: 329 GGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPA 370
G +IG+ GA I ++Q +G IK+ V G+ DR + I+G A
Sbjct: 308 GCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSA 349
>gi|392340090|ref|XP_002726454.2| PREDICTED: poly(rC)-binding protein 1, partial [Rattus norvegicus]
Length = 365
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 158/364 (43%), Gaps = 48/364 (13%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 23 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTNAIFKA 80
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I ++ ++ + V RL+V + Q G L+GKGG I E+R+ +GA
Sbjct: 81 FAM--IIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGA 138
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSI-NRPLNP 492
+++ G D +P + E + I G ++V E + QI + + + P P
Sbjct: 139 QVQVAG-DMLP---NSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQP 194
Query: 493 TFLDQVSPFPSFIGRRELSPPGMYSNF-----GPSFHKFDAVGGPPPPGSFHPHD----- 542
+ SP G+ S Y + GP + G + P D
Sbjct: 195 --MPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQG----QHTISPLDLAKLN 248
Query: 543 ------DHSAFMH-HIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVV 595
H A MH G+ P++K + + + +
Sbjct: 249 QVARQQSHFAMMHGGTGFAGIDSSSPEVKGY-------------WASLDASTQTTHELTI 295
Query: 596 PRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAF 655
P +L+ I G GA + +IRQ+S A+I I +P G++ + I+G+ AQ LI A
Sbjct: 296 PNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLINAR 355
Query: 656 VMSE 659
+ SE
Sbjct: 356 LSSE 359
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 115/275 (41%), Gaps = 63/275 (22%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T +S+ LRL+V +TQ G L+GKGGC IK
Sbjct: 74 TNAIFKAFAMIIDKL---EEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIK 130
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALK---LISHQLLDNSPRDH- 254
+I D LP +++ + I G +V + +K L+ + L SP+
Sbjct: 131 EIRESTGAQVQVAGDMLPN---STERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRV 187
Query: 255 ESIPGNPTGPSHPL-----PDHSVSSQGAPYAT--------GHRDVADIHLPMPPSIPKF 301
+IP P S P+ D + G P+AT + H P + K
Sbjct: 188 MTIPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKL 247
Query: 302 HE--------------SGVLDRPKPSPEI------------LTFRLLCHDERVGGVIGKG 335
++ +G SPE+ T L + +G +IG+
Sbjct: 248 NQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQ 307
Query: 336 GAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPA 370
GA I ++Q +G IK+ V G+ R + I+G A
Sbjct: 308 GANINEIRQMSGAQIKIANPVEGSSGRQVTITGSA 342
>gi|294460460|gb|ADE75808.1| unknown [Picea sitchensis]
Length = 131
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/127 (47%), Positives = 75/127 (59%), Gaps = 20/127 (15%)
Query: 551 IHRPGMPPHM---PDMKPWGPQGLMEVGGPMGFPDF-VGPPHR---------------RV 591
+HRPGM ++ P PW QG+ G D+ G P R V
Sbjct: 1 MHRPGMHHNIDQPPSPGPWAVQGI-GAGSARSMTDYGRGFPQRGSLGSGSQSAVVTNTTV 59
Query: 592 PVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSL 651
VVVP ++ I GE+G L QIRQIS AK+ I DP+PGATE +++ISGTPEQTHAAQSL
Sbjct: 60 EVVVPERVIGSIYGENGNNLTQIRQISGAKVIIHDPRPGATEGLVVISGTPEQTHAAQSL 119
Query: 652 IQAFVMS 658
+QAF+MS
Sbjct: 120 LQAFIMS 126
>gi|449445515|ref|XP_004140518.1| PREDICTED: poly(rC)-binding protein 2-like [Cucumis sativus]
gi|449529952|ref|XP_004171961.1| PREDICTED: poly(rC)-binding protein 2-like [Cucumis sativus]
Length = 276
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 100/170 (58%), Gaps = 12/170 (7%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
+ FR++ +++G VIGK G I+ +++ET IK+ +AV+ E+R+I+IS + ++ +
Sbjct: 69 VLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDN-ENSV 127
Query: 377 SAPQDAVLRVQTRIARAIPDNREQTVM---------TRLLVASNQIGCLLGKGGSIIAEM 427
+ + A+ ++ I + + E+ + RLL+A +Q G L+G G I ++
Sbjct: 128 TDAEKALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKL 187
Query: 428 RKLSGAYIRILGKDQIPKCAS--ENEEVVLINGEFEAVQEALFQITTRLR 475
R SGA I IL +Q+P CAS E++ VV I+G+ AV +AL +I +LR
Sbjct: 188 RNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLR 237
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 111/250 (44%), Gaps = 64/250 (25%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
++FR++ P +I VIGK G + ++ ++T TI++ + V+ +ER+++I + DN
Sbjct: 69 VLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDN----- 123
Query: 106 ENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFE 165
E+SV + E + Q A L++ E
Sbjct: 124 ----------------------------ENSVTDA-----------EKALQQIAALILKE 144
Query: 166 RMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI------------- 212
+E E +V ++ +RLL+ +Q G L+G G I+++
Sbjct: 145 DGSSIE-ELKVGTGHVAANT---IRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP 200
Query: 213 DKLPTCALA--SDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESI-PGNPTGPSHPLP 269
++LP CA A SD VVQI+G++ V KAL+ I +QL N PR S+ P HP
Sbjct: 201 NQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVNPPRQVISVSPTYNYNTMHPPQ 260
Query: 270 DHSVSSQGAP 279
+ + G P
Sbjct: 261 SYMDPTSGKP 270
>gi|226528431|ref|NP_001149906.1| nucleic acid binding protein [Zea mays]
gi|195635381|gb|ACG37159.1| nucleic acid binding protein [Zea mays]
Length = 448
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 94/359 (26%), Positives = 153/359 (42%), Gaps = 46/359 (12%)
Query: 318 TFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRIS 377
FRL+ +VG +IG+ G +I+ L +ET ++++E G +R++++SG PD +
Sbjct: 47 VFRLVVPVLKVGSIIGRKGELIKRLVEETKARVRILEGPVGATERIVLVSGKEDPDLELP 106
Query: 378 APQDAVLRVQTRIARAIPDNRE---------QTVMTRLLVASNQIGCLLGKGGSIIAEMR 428
DA++RV + I D RLLV Q L+GK G+ I ++
Sbjct: 107 PAMDALMRVFKXVT-GITDGAAEXTQAAATPDVCAARLLVPGAQAINLIGKQGATIKAIQ 165
Query: 429 KLSGAYIRILGKD--QIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSI 486
+ + A IR++ D + P +++E +V I G+ E V +AL ++ LR + +
Sbjct: 166 ESTSATIRVISVDEHERPFYVTDDERIVEIQGDTEKVLKALQAVSNHLRKFLVDHSVLPL 225
Query: 487 NRPLNPTFLDQVSPFPSFIGRRELSPPGMYS---NFGPSFHKFDAVGGPPPPGSFHPHDD 543
N T VS + G ++S P + S N PS + P +
Sbjct: 226 FEKTNTT----VSQDRNGDGWSDMSRPSIGSAQVNQLPSVLDDYILQVKRDPLYL---ER 278
Query: 544 HSAFMHHIHRPGMP-----PHMPDMKPWGPQG----LMEVGGPMGFPDFVGPPHRRVPVV 594
S H+IHR G+ P + ++P G L ++ M
Sbjct: 279 ESLVDHNIHRSGVSLYGRDPALSTLRPSAVHGAGSLLTQITQTMQ--------------- 323
Query: 595 VPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQ 653
+P + I G GA + IR S A +TI + + + I GT Q AAQ LIQ
Sbjct: 324 IPLTYAEDIIGVKGANIAYIRANSGAVVTIQESLGSPDDITVEIKGTSSQVQAAQQLIQ 382
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 87/220 (39%), Gaps = 63/220 (28%)
Query: 42 FPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNK 101
+PG +FR++ PV K+ +IG+ GE++ ++ ++T +R+ E G+ ER+V++
Sbjct: 42 WPGDSVFRLVVPVLKVGSIIGRKGELIKRLVEETKARVRILEGPVGATERIVLVSG---- 97
Query: 102 KETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALL 161
KED E MD AL+
Sbjct: 98 -------------------------------KEDPDLELPPAMD-------------ALM 113
Query: 162 LVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKLPTC--- 218
VF+ + + Q RLLV Q L+GK G IK I + +
Sbjct: 114 RVFKXVTGITDGAAEXTQAAATPDVCAARLLVPGAQAINLIGKQGATIKAIQESTSATIR 173
Query: 219 ALASDE------------VVQITGEVDTVRKALKLISHQL 246
++ DE +V+I G+ + V KAL+ +S+ L
Sbjct: 174 VISVDEHERPFYVTDDERIVEIQGDTEKVLKALQAVSNHL 213
>gi|460771|emb|CAA55016.1| hnRNP-E1 [Homo sapiens]
Length = 356
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 96/367 (26%), Positives = 161/367 (43%), Gaps = 54/367 (14%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTNAIFKA 71
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I ++ ++ + V RL+V + Q G L+GKGG I E+R+ +GA
Sbjct: 72 FAM--IIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPT 493
+++ G D +P + E + I G ++V E + QI + + P
Sbjct: 130 QVQVAG-DMLP---NSTERAITIAGVPQSVTECVKQICLVMLETLSQS-------PQGRV 178
Query: 494 FLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGP--------PPPGSFHPHDDHS 545
P P+ S P + + G DAVG P PP ++ H+
Sbjct: 179 MTIPYQPMPA-------SSPVICA--GGQDRCSDAVGYPHATHDLEGPPLDAYSIQGQHT 229
Query: 546 ------AFMHHIHRPGMPPHMPDMKPWGPQGLM-------EVGGPMGFPDFVGPPHRRVP 592
A ++ + R H M G G EV G D
Sbjct: 230 ISPLDLAKLNQVAR--QQSHFAMMH--GGTGFAGIDSSSPEVKGYWASLD--ASTQTTHE 283
Query: 593 VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLI 652
+ +P +L+ I G GA + +IRQ+S A+I I +P G++ + I+G+ AQ LI
Sbjct: 284 LTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLI 343
Query: 653 QAFVMSE 659
A + SE
Sbjct: 344 NARLSSE 350
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 115/275 (41%), Gaps = 63/275 (22%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T +S+ LRL+V +TQ G L+GKGGC IK
Sbjct: 65 TNAIFKAFAMIIDKL---EEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIK 121
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALK---LISHQLLDNSPRDH- 254
+I D LP +++ + I G +V + +K L+ + L SP+
Sbjct: 122 EIRESTGAQVQVAGDMLPN---STERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRV 178
Query: 255 ESIPGNPTGPSHPL-----PDHSVSSQGAPYAT--------GHRDVADIHLPMPPSIPKF 301
+IP P S P+ D + G P+AT + H P + K
Sbjct: 179 MTIPYQPMPASSPVICAGGQDRCSDAVGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKL 238
Query: 302 HE--------------SGVLDRPKPSPEI------------LTFRLLCHDERVGGVIGKG 335
++ +G SPE+ T L + +G +IG+
Sbjct: 239 NQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQ 298
Query: 336 GAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPA 370
GA I ++Q +G IK+ V G+ R + I+G A
Sbjct: 299 GANINEIRQMSGAQIKIANPVEGSSGRQVTITGSA 333
>gi|440907813|gb|ELR57910.1| Poly(rC)-binding protein 1 [Bos grunniens mutus]
Length = 356
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 158/366 (43%), Gaps = 52/366 (14%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTNAIFKA 71
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I ++ ++ + V RL+V + Q G L+GKGG I E+R+ +GA
Sbjct: 72 FAM--IIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSI-NRPLNP 492
+++ G D +P + E + I G ++V E + QI + + + P P
Sbjct: 130 QVQVAG-DMLP---NSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQP 185
Query: 493 TFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPG-------SFHPHD--- 542
+ SP G+ S Y H + GPP + P D
Sbjct: 186 --MPASSPVICAGGQDRCSDAAGYP------HATHDLEGPPLDAYSIQGQHTISPLDLAK 237
Query: 543 --------DHSAFMH-HIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPV 593
H A MH G+ P++K + + +
Sbjct: 238 LNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGY-------------WASLDASTQTTHEL 284
Query: 594 VVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQ 653
+P +L+ I G G+ + +IRQ+S A+I I +P G++ + I+G+ AQ LI
Sbjct: 285 TIPNNLIGCIIGRQGSNINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLIN 344
Query: 654 AFVMSE 659
A + SE
Sbjct: 345 ARLSSE 350
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 115/275 (41%), Gaps = 63/275 (22%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T +S+ LRL+V +TQ G L+GKGGC IK
Sbjct: 65 TNAIFKAFAMIIDKL---EEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIK 121
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALK---LISHQLLDNSPRDH- 254
+I D LP +++ + I G +V + +K L+ + L SP+
Sbjct: 122 EIRESTGAQVQVAGDMLPN---STERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRV 178
Query: 255 ESIPGNPTGPSHPL-----PDHSVSSQGAPYAT--------GHRDVADIHLPMPPSIPKF 301
+IP P S P+ D + G P+AT + H P + K
Sbjct: 179 MTIPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKL 238
Query: 302 HE--------------SGVLDRPKPSPEI------------LTFRLLCHDERVGGVIGKG 335
++ +G SPE+ T L + +G +IG+
Sbjct: 239 NQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQ 298
Query: 336 GAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPA 370
G+ I ++Q +G IK+ V G+ R + I+G A
Sbjct: 299 GSNINEIRQMSGAQIKIANPVEGSSGRQVTITGSA 333
>gi|392347468|ref|XP_003749842.1| PREDICTED: poly(rC)-binding protein 1 [Rattus norvegicus]
Length = 516
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 158/364 (43%), Gaps = 48/364 (13%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 174 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTNAIFKA 231
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I ++ ++ + V RL+V + Q G L+GKGG I E+R+ +GA
Sbjct: 232 FA--MIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGA 289
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSI-NRPLNP 492
+++ G D +P + E + I G ++V E + QI + + + P P
Sbjct: 290 QVQVAG-DMLP---NSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQP 345
Query: 493 TFLDQVSPFPSFIGRRELSPPGMYSNF-----GPSFHKFDAVGGPPPPGSFHPHD----- 542
+ SP G+ S Y + GP + G + P D
Sbjct: 346 --MPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQG----QHTISPLDLAKLN 399
Query: 543 ------DHSAFMH-HIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVV 595
H A MH G+ P++K + + + +
Sbjct: 400 QVARQQSHFAMMHGGTGFAGIDSSSPEVKGY-------------WASLDASTQTTHELTI 446
Query: 596 PRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAF 655
P +L+ I G GA + +IRQ+S A+I I +P G++ + I+G+ AQ LI A
Sbjct: 447 PNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLINAR 506
Query: 656 VMSE 659
+ SE
Sbjct: 507 LSSE 510
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 115/275 (41%), Gaps = 63/275 (22%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T +S+ LRL+V +TQ G L+GKGGC IK
Sbjct: 225 TNAIFKAFAMIIDKL---EEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIK 281
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALK---LISHQLLDNSPRDH- 254
+I D LP +++ + I G +V + +K L+ + L SP+
Sbjct: 282 EIRESTGAQVQVAGDMLPN---STERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRV 338
Query: 255 ESIPGNPTGPSHPL-----PDHSVSSQGAPYAT--------GHRDVADIHLPMPPSIPKF 301
+IP P S P+ D + G P+AT + H P + K
Sbjct: 339 MTIPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKL 398
Query: 302 HE--------------SGVLDRPKPSPEI------------LTFRLLCHDERVGGVIGKG 335
++ +G SPE+ T L + +G +IG+
Sbjct: 399 NQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQ 458
Query: 336 GAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPA 370
GA I ++Q +G IK+ V G+ R + I+G A
Sbjct: 459 GANINEIRQMSGAQIKIANPVEGSSGRQVTITGSA 493
>gi|354490193|ref|XP_003507244.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Cricetulus
griseus]
Length = 331
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 156/358 (43%), Gaps = 60/358 (16%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTNAIFKA 71
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I+ ++ ++ + V RL+V ++Q G L+GKGG I E+R+ +GA
Sbjct: 72 FA--MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPT 493
+++ G D +P + E + I G +++ E + QI + + P P
Sbjct: 130 QVQVAG-DMLP---NSTERAITIAGIPQSIIECVKQICVVM----LESPPKGVTIPYRPK 181
Query: 494 FLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHR 553
SP F G + + G Y+ P K H M H
Sbjct: 182 --PSSSPVI-FAGGQAYTIQGQYAIPQPDLTKL-----------------HQLAMQQSHF 221
Query: 554 P---------GMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVP--VVVPRSLVPI 602
P G+ P++K G+ + + + +P L+
Sbjct: 222 PMTHGNTGFSGIESSSPEVK--------------GYWAGLDASAQTTSHELTIPNDLIGC 267
Query: 603 IQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSET 660
I G GA + +IRQ+S A+I +P G+T+ + I+G+ AQ LI + SET
Sbjct: 268 IIGRQGAKINEIRQMSGAQIKTANPVEGSTDRQVTITGSAASISLAQYLINVRLSSET 325
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 117/251 (46%), Gaps = 41/251 (16%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T +S+ LRL+V ++Q G L+GKGGC IK
Sbjct: 65 TNAIFKAFAMIIDKL---EEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIP 258
+I D LP +++ + I G ++ + +K I +L++ P+ +IP
Sbjct: 122 EIRESTGAQVQVAGDMLPN---STERAITIAGIPQSIIECVKQICVVMLESPPKG-VTIP 177
Query: 259 GNPTGPSHPL---PDHSVSSQGAPYATGHRDVADIH-LPMPPS-IPKFH-ESGVLDRPKP 312
P S P+ + + QG YA D+ +H L M S P H +G
Sbjct: 178 YRPKPSSSPVIFAGGQAYTIQGQ-YAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESS 236
Query: 313 SPEILTF-------------RLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGT 359
SPE+ + L ++ +G +IG+ GA I ++Q +G IK V G+
Sbjct: 237 SPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKTANPVEGS 296
Query: 360 EDRLIVISGPA 370
DR + I+G A
Sbjct: 297 TDRQVTITGSA 307
>gi|57093423|ref|XP_538537.1| PREDICTED: poly(rC)-binding protein 1 isoform 1 [Canis lupus
familiaris]
Length = 356
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 156/360 (43%), Gaps = 40/360 (11%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTNAIFKA 71
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I ++ ++ + V RL+V + Q G L+GKGG I E+R+ +GA
Sbjct: 72 FAM--IIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSI-NRPLNP 492
+++ G D +P + E + I G ++V E + QI + + + P P
Sbjct: 130 QVQVAG-DMLP---NSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQP 185
Query: 493 TFLDQVSPFPSFIGRRELSPPGMYSNF-----GPSFHKFDAVG----GPPPPGSFHP--- 540
+ SP G+ Y + GP + G P +
Sbjct: 186 --MPASSPVICAGGQDRCGDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKLNQVAR 243
Query: 541 HDDHSAFMH-HIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSL 599
H A MH G+ P++K + + + +P +L
Sbjct: 244 QQSHFAMMHGGTGFAGIDSSSPEVKGY-------------WASLDASTQTTHELTIPNNL 290
Query: 600 VPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
+ I G GA + +IRQ+S A+I I +P G++ + I+G+ AQ LI A + SE
Sbjct: 291 IGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLINARLSSE 350
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 115/275 (41%), Gaps = 63/275 (22%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T +S+ LRL+V +TQ G L+GKGGC IK
Sbjct: 65 TNAIFKAFAMIIDKL---EEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIK 121
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALK---LISHQLLDNSPRDH- 254
+I D LP +++ + I G +V + +K L+ + L SP+
Sbjct: 122 EIRESTGAQVQVAGDMLPN---STERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRV 178
Query: 255 ESIPGNPTGPSHPL-----PDHSVSSQGAPYAT--------GHRDVADIHLPMPPSIPKF 301
+IP P S P+ D + G P+AT + H P + K
Sbjct: 179 MTIPYQPMPASSPVICAGGQDRCGDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKL 238
Query: 302 HE--------------SGVLDRPKPSPEI------------LTFRLLCHDERVGGVIGKG 335
++ +G SPE+ T L + +G +IG+
Sbjct: 239 NQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQ 298
Query: 336 GAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPA 370
GA I ++Q +G IK+ V G+ R + I+G A
Sbjct: 299 GANINEIRQMSGAQIKIANPVEGSSGRQVTITGSA 333
>gi|326511144|dbj|BAJ87586.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 450
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 160/372 (43%), Gaps = 56/372 (15%)
Query: 318 TFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRIS 377
FR++ +VG +IG+ G +I+ L +ET ++V+E G +R++++S P +
Sbjct: 52 VFRMVVPVLKVGSIIGRKGELIKRLVEETKARVRVLEGPVGATERIVLVSAKEDPGLELP 111
Query: 378 APQDAVLRVQTRIARAIPDNREQTVMT---------RLLVASNQIGCLLGKGGSIIAEMR 428
DA++RV R+ I D + T RL+V Q L+GK G+ I ++
Sbjct: 112 PAMDALIRVFKRV-NGISDGAAEGTQTSAAPGVCAARLVVPGAQAINLIGKQGASIKAIQ 170
Query: 429 KLSGAYIRILGKDQ--IPKCASENEEVVLINGEFEAVQEALFQITTRLRH----HFFRDA 482
+ +GA IR++ D+ P +++E +V I GE E V +AL ++ LR H
Sbjct: 171 EGTGATIRVISVDERDRPFYVTDDERIVEIQGETEKVLKALQAVSNHLRKFLVDHSVLPL 230
Query: 483 FPSINRPLN-----PTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGS 537
F N P++ T+ D P S + + P + + P
Sbjct: 231 FEKTNAPVSQDRSAETWNDM--PHHSIVSTQVNQQPEVRDEY------------VLPMKR 276
Query: 538 FHPHDDHSAFM-HHIHRPGMP-----PHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRV 591
H + + + H+IHR G+ P + ++P G G GP ++
Sbjct: 277 DHLYLEREPLVEHNIHRSGVSLYGRDPALSALRPSGMHG-------------AGPLLTQI 323
Query: 592 --PVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQ 649
+ +P + I G GA + IR S A +TI + + + I GT Q +AQ
Sbjct: 324 TQTMQIPLTYAEDIIGVKGANIAYIRANSGAVVTIQESLGSPDDITVEIKGTSSQVQSAQ 383
Query: 650 SLIQAFVMSETE 661
LIQ + + E
Sbjct: 384 QLIQDSLAAHRE 395
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 87/220 (39%), Gaps = 63/220 (28%)
Query: 42 FPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNK 101
+PG +FR++ PV K+ +IG+ GE++ ++ ++T +RV E G+ ER+V++ A
Sbjct: 47 WPGDNVFRMVVPVLKVGSIIGRKGELIKRLVEETKARVRVLEGPVGATERIVLVSA---- 102
Query: 102 KETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALL 161
KED E MD AL+
Sbjct: 103 -------------------------------KEDPGLELPPAMD-------------ALI 118
Query: 162 LVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDK------- 214
VF+R+ + Q + RL+V Q L+GK G IK I +
Sbjct: 119 RVFKRVNGISDGAAEGTQTSAAPGVCAARLVVPGAQAINLIGKQGASIKAIQEGTGATIR 178
Query: 215 --------LPTCALASDEVVQITGEVDTVRKALKLISHQL 246
P + +V+I GE + V KAL+ +S+ L
Sbjct: 179 VISVDERDRPFYVTDDERIVEIQGETEKVLKALQAVSNHL 218
>gi|311252459|ref|XP_003125105.1| PREDICTED: poly(rC)-binding protein 1-like [Sus scrofa]
Length = 356
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 156/367 (42%), Gaps = 54/367 (14%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTNAIFKA 71
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I ++ ++ + V RL+V + Q G L+GKGG I E+R+ +GA
Sbjct: 72 FAM--IIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRD------AFPSIN 487
+++ G D +P + E + I G ++V E + QI + + P
Sbjct: 130 QVQVAG-DMLP---NSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQP 185
Query: 488 RPLNPTFL--------DQVSPFPSFIGRRELSPPGMYSNFGP------SFHKFDAVGGPP 533
P + + + +P E +P YS G K + V
Sbjct: 186 MPASSPVICAGGQDRCSDAAGYPHATHDLEGTPLDAYSIQGQHTISPLDLAKLNQVA--- 242
Query: 534 PPGSFHPHDDHSAFMH-HIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVP 592
H A MH G+ P++K + +
Sbjct: 243 ------RQQSHFAMMHGGTGFAGIDSSSPEVKGY-------------WASLDASTQTTHE 283
Query: 593 VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLI 652
+ +P +L+ I G GA + +IRQ+S A+I I +P G++ + I+G+ AQ LI
Sbjct: 284 LTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLI 343
Query: 653 QAFVMSE 659
A + SE
Sbjct: 344 NARLSSE 350
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 115/275 (41%), Gaps = 63/275 (22%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T +S+ LRL+V +TQ G L+GKGGC IK
Sbjct: 65 TNAIFKAFAMIIDKL---EEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIK 121
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALK---LISHQLLDNSPRDH- 254
+I D LP +++ + I G +V + +K L+ + L SP+
Sbjct: 122 EIRESTGAQVQVAGDMLPN---STERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRV 178
Query: 255 ESIPGNPTGPSHPL-----PDHSVSSQGAPYAT--------GHRDVADIHLPMPPSIPKF 301
+IP P S P+ D + G P+AT + H P + K
Sbjct: 179 MTIPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGTPLDAYSIQGQHTISPLDLAKL 238
Query: 302 HE--------------SGVLDRPKPSPEI------------LTFRLLCHDERVGGVIGKG 335
++ +G SPE+ T L + +G +IG+
Sbjct: 239 NQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQ 298
Query: 336 GAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPA 370
GA I ++Q +G IK+ V G+ R + I+G A
Sbjct: 299 GANINEIRQMSGAQIKIANPVEGSSGRQVTITGSA 333
>gi|449281891|gb|EMC88850.1| Poly(rC)-binding protein 3 [Columba livia]
Length = 330
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 151/357 (42%), Gaps = 60/357 (16%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSL--KQETGCDIKVMEAVSGTEDRLIVISGPAHPDD 374
LT RLL H + VG +IGK +SL ++G I + E +R++ I+GP D
Sbjct: 14 LTIRLLMHGKEVGSIIGKVRMSFKSLPFSFQSGARINISEG--NCPERIVTITGPT--DA 69
Query: 375 RISAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLS 431
A + + I ++ ++ + V RL+V ++Q G L+GKGGS I E+R+ +
Sbjct: 70 IFKAFAMIAYKFEEDITNSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIREST 129
Query: 432 GAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDA-FPSINRPL 490
GA +++ G D +P + E V I+G +A+ + + QI + + A P +P
Sbjct: 130 GAQVQVAG-DMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPA 185
Query: 491 NPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHH 550
+ + F G + + G Y+ PH D +H
Sbjct: 186 STPVI--------FAGGQAYTIQGQYA---------------------IPHPDQLTKLHQ 216
Query: 551 IHRPGMP--------PHMPDMK-----PWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPR 597
+ P P P K Q LM G G PP + +P
Sbjct: 217 LAMQQTPFTPLGQTTPAFPGEKLPLHSSEEAQNLM--GQSSGLD--ASPPASTHELTIPN 272
Query: 598 SLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQA 654
L+ I G G + +IRQ+S A+I I + G++E I I+GTP AQ LI A
Sbjct: 273 DLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINA 329
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 111/255 (43%), Gaps = 45/255 (17%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI 212
T + KA ++ + E + +++ T LRL+V ++Q G L+GKGG IK+I
Sbjct: 67 TDAIFKAFAMIAYKFEE-DITNSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 125
Query: 213 ------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGN 260
D LP +++ V I+G D + + +K I +L++ P+ +IP
Sbjct: 126 RESTGAQVQVAGDMLPN---STERAVTISGTPDAIIQCVKQICVVMLESPPKG-ATIPYR 181
Query: 261 PTGPSHPL---PDHSVSSQGAPYATGHRD-VADIH---------LPMPPSIPKF------ 301
P S P+ + + QG YA H D + +H P+ + P F
Sbjct: 182 PKPASTPVIFAGGQAYTIQGQ-YAIPHPDQLTKLHQLAMQQTPFTPLGQTTPAFPGEKLP 240
Query: 302 -HES-------GVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVM 353
H S G SP T L ++ +G +IG+ G I ++Q +G IK+
Sbjct: 241 LHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIA 300
Query: 354 EAVSGTEDRLIVISG 368
A G+ +R I I+G
Sbjct: 301 NATEGSSERQITITG 315
>gi|363747263|ref|XP_003643960.1| PREDICTED: poly(rC)-binding protein 2-like isoform 2 [Gallus
gallus]
Length = 349
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 160/361 (44%), Gaps = 53/361 (14%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTNAIFKA 71
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I+ ++ ++ + V RL+V ++Q G L+GKGG I E+R+ +GA
Sbjct: 72 FA--MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPT 493
+++ G D +P + E + I G +++ E + QI + + P P
Sbjct: 130 QVQVAG-DMLP---NSTERAITIAGIPQSIIECVKQICVVM----LESPPKGVTIPYRPK 181
Query: 494 FLDQVSPFPSFIGR-RELSPPGMYSNFGPSFHKFDAVGGPPP-----PGSFH-PHDD--- 543
SP G+ R S Y + PS + GPP G + P D
Sbjct: 182 --PSSSPVIFAGGQDRYSSGSASYPHTAPSMCLNSDLEGPPQEAYTIQGQYAIPQPDLTK 239
Query: 544 -HSAFMHHIHRP---------GMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVP- 592
H M H P G+ P++K G+ + +
Sbjct: 240 LHQLAMQQSHFPMSHGNTGFSGIESSSPEVK--------------GYWAGLDASAQTTSH 285
Query: 593 -VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSL 651
+ +P L+ I G GA + +IRQ+S A+I I +P G+T+ + I+G+ AQ L
Sbjct: 286 ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYL 345
Query: 652 I 652
I
Sbjct: 346 I 346
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 120/280 (42%), Gaps = 70/280 (25%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T +S+ LRL+V ++Q G L+GKGGC IK
Sbjct: 65 TNAIFKAFAMIIDKL---EEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIP 258
+I D LP +++ + I G ++ + +K I +L++ P+ +IP
Sbjct: 122 EIRESTGAQVQVAGDMLPN---STERAITIAGIPQSIIECVKQICVVMLESPPKG-VTIP 177
Query: 259 GNP-------------------------TGPSHPL-------PDHSVSSQGAPYATGHRD 286
P T PS L P + + QG YA D
Sbjct: 178 YRPKPSSSPVIFAGGQDRYSSGSASYPHTAPSMCLNSDLEGPPQEAYTIQGQ-YAIPQPD 236
Query: 287 VADIH-LPMPPS-IPKFH-ESGVLDRPKPSPEILTF-------------RLLCHDERVGG 330
+ +H L M S P H +G SPE+ + L ++ +G
Sbjct: 237 LTKLHQLAMQQSHFPMSHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGC 296
Query: 331 VIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPA 370
+IG+ GA I ++Q +G IK+ V G+ DR + I+G A
Sbjct: 297 IIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSA 336
Score = 39.3 bits (90), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 396 DNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVL 455
D QT L + ++ IGC++G+ G+ I E+R++SGA I+I P S + +V
Sbjct: 277 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN----PVEGSTDRQVT- 331
Query: 456 INGEFEAVQEALFQITTR 473
I G ++ A + I R
Sbjct: 332 ITGSAASISLAQYLINVR 349
>gi|376338927|gb|AFB33992.1| hypothetical protein CL1760Contig1_01, partial [Larix decidua]
gi|376338929|gb|AFB33993.1| hypothetical protein CL1760Contig1_01, partial [Larix decidua]
gi|376338931|gb|AFB33994.1| hypothetical protein CL1760Contig1_01, partial [Larix decidua]
gi|376338933|gb|AFB33995.1| hypothetical protein CL1760Contig1_01, partial [Larix decidua]
Length = 86
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 59/81 (72%)
Query: 401 TVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEF 460
+ T+LL+ SNQ GCLLGKGG+II+EMRK + A IRIL K+ +P CA +++E+V I G+
Sbjct: 2 VITTKLLIPSNQTGCLLGKGGAIISEMRKQTRANIRILPKEDLPPCALDSDEMVQIVGDI 61
Query: 461 EAVQEALFQITTRLRHHFFRD 481
A + AL Q+T+RLR R+
Sbjct: 62 RAARAALVQVTSRLRSFIHRE 82
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 41/70 (58%), Gaps = 13/70 (18%)
Query: 190 RLLVLSTQVGCLLGKGGCVIKQIDK-------------LPTCALASDEVVQITGEVDTVR 236
+LL+ S Q GCLLGKGG +I ++ K LP CAL SDE+VQI G++ R
Sbjct: 6 KLLIPSNQTGCLLGKGGAIISEMRKQTRANIRILPKEDLPPCALDSDEMVQIVGDIRAAR 65
Query: 237 KALKLISHQL 246
AL ++ +L
Sbjct: 66 AALVQVTSRL 75
>gi|147901405|ref|NP_001084264.1| poly(rC) binding protein 2 [Xenopus laevis]
gi|5459450|emb|CAB50743.1| hnRNP-E2 protein [Xenopus laevis]
Length = 353
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 156/359 (43%), Gaps = 42/359 (11%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTNAIFK- 70
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I+ ++ ++ + V RL+V ++Q G L+GKGG I E+R+ +GA
Sbjct: 71 -AFSMIIDKLEEDISSSMTNSTASSKPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPT 493
+++ G D +P + E + I G +++ E + QI + + P P
Sbjct: 130 QVQVAG-DMLP---NSTERAITIAGIPQSIIECVKQICVVM----LESPPKGVTIPYRPK 181
Query: 494 FLDQVSPFPSFIGRRELSPPGMYSNF---------GPSFHKFDAVGGPPPPGSFH-PHDD 543
F R+ ++ G S D G G + P D
Sbjct: 182 PSSSPVIFAGGQVSRQAGGHACETDLWEGRRSHTGGVSLDAVDLHGAYTIQGQYAIPQPD 241
Query: 544 HSAFMHHIHRPGM-PPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVP--VVVPRSLV 600
+ +H+ M H P M G GF + + + +P L+
Sbjct: 242 ----LTKLHQLAMQQSHFP----------MSHSGNTGFSGGIDASAQTTSHELTIPNDLI 287
Query: 601 PIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
I G GA + +IRQ+S A+I I +P G+ + + I+G+ AQ LI + SE
Sbjct: 288 GCIIGRQGAKINEIRQMSGAQIKIANPVEGSNDRQVTITGSTASISLAQYLINVRLSSE 346
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 120/273 (43%), Gaps = 67/273 (24%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T SSK LRL+V ++Q G L+GKGGC IK
Sbjct: 65 TNAIFKAFSMIIDKL---EEDISSSMTNSTASSKPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIP 258
+I D LP +++ + I G ++ + +K I +L++ P+ +IP
Sbjct: 122 EIRESTGAQVQVAGDMLPN---STERAITIAGIPQSIIECVKQICVVMLESPPKG-VTIP 177
Query: 259 GNPTGPSHPL--PDHSVSSQGAPYAT------GHR--------DVADIH--------LPM 294
P S P+ VS Q +A G R D D+H +
Sbjct: 178 YRPKPSSSPVIFAGGQVSRQAGGHACETDLWEGRRSHTGGVSLDAVDLHGAYTIQGQYAI 237
Query: 295 P-PSIPKFHE------------------SGVLDRPKPSPEILTFRLLCHDERVGGVIGKG 335
P P + K H+ SG +D S + + L ++ +G +IG+
Sbjct: 238 PQPDLTKLHQLAMQQSHFPMSHSGNTGFSGGID---ASAQTTSHELTIPNDLIGCIIGRQ 294
Query: 336 GAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
GA I ++Q +G IK+ V G+ DR + I+G
Sbjct: 295 GAKINEIRQMSGAQIKIANPVEGSNDRQVTITG 327
>gi|223947189|gb|ACN27678.1| unknown [Zea mays]
gi|223950255|gb|ACN29211.1| unknown [Zea mays]
gi|414868821|tpg|DAA47378.1| TPA: KH domain containing protein [Zea mays]
Length = 508
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 92/187 (49%), Gaps = 16/187 (8%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISA 378
FR+L +VG VIG+ G I+ + +E+ IKV+E +R ++IS PD +
Sbjct: 109 FRILVPTTKVGAVIGRKGDFIKKMCEESRARIKVLEGPPAVPERAVMISAKDEPDTELPP 168
Query: 379 PQDAVLRVQTRIARAIPDNREQ-------TVMTRLLVASNQIGCLLGKGGSIIAEMRKLS 431
D +LRV RI + +Q T TRLLV ++Q G L+GK G+ I ++ S
Sbjct: 169 AVDGLLRVHRRITDGLETETDQPQRATVNTGPTRLLVPASQAGSLIGKQGATIKSIQDAS 228
Query: 432 GAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLN 491
+RI+ + +P A ++ VV I GE +A+ I + LR ++R +
Sbjct: 229 KCVLRIV--ENVPPVALNDDRVVEIQGEPHDSHKAVELIASHLRKFL-------VDRSVL 279
Query: 492 PTFLDQV 498
P F Q+
Sbjct: 280 PLFETQI 286
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 94/216 (43%), Gaps = 60/216 (27%)
Query: 42 FPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNK 101
+PG +FR+L P +K+ VIG+ G+ + ++ +++ I+V E ER V+I A D
Sbjct: 103 WPGESVFRILVPTTKVGAVIGRKGDFIKKMCEESRARIKVLEGPPAVPERAVMISAKD-- 160
Query: 102 KETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALL 161
E L +++ R + DGL E ET + Q+A +
Sbjct: 161 -EPDTELPPAVDGLLRVHRR---------------------ITDGL--ETETDQPQRATV 196
Query: 162 LVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGG-----------CVIK 210
NT + RLLV ++Q G L+GK G CV++
Sbjct: 197 -------------------NTGPT----RLLVPASQAGSLIGKQGATIKSIQDASKCVLR 233
Query: 211 QIDKLPTCALASDEVVQITGEVDTVRKALKLISHQL 246
++ +P AL D VV+I GE KA++LI+ L
Sbjct: 234 IVENVPPVALNDDRVVEIQGEPHDSHKAVELIASHL 269
>gi|53749712|ref|NP_001005451.1| poly(rC) binding protein 3 [Xenopus (Silurana) tropicalis]
gi|49250542|gb|AAH74565.1| poly(rC) binding protein 2 [Xenopus (Silurana) tropicalis]
gi|89266917|emb|CAJ82240.1| novel protein similar to poly(rC) binding protein 2 [Xenopus
(Silurana) tropicalis]
Length = 353
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 156/359 (43%), Gaps = 42/359 (11%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTNAIFK- 70
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I+ ++ ++ + V RL+V ++Q G L+GKGG I E+R+ +GA
Sbjct: 71 -AFSMIIDKLEEDISSSMTNSTASSKPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPT 493
+++ G D +P + E + I G +++ E + QI + + P P
Sbjct: 130 QVQVAG-DMLP---NSTERAITIAGIPQSIIECVKQICVVM----LESPPKGVTIPYRPK 181
Query: 494 FLDQVSPFPSFIGRRELSPPGMYSNF---------GPSFHKFDAVGGPPPPGSFH-PHDD 543
F R+ ++ G S D G G + P D
Sbjct: 182 PSSSPVIFAGGQVSRQAGGHACETDLWEGRRSHTGGVSLDAVDLHGAYTIQGQYAIPQPD 241
Query: 544 HSAFMHHIHRPGM-PPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVP--VVVPRSLV 600
+ +H+ M H P M G GF + + + +P L+
Sbjct: 242 ----LTKLHQLAMQQSHFP----------MSHSGNTGFSGGIDASAQTTSHELTIPNDLI 287
Query: 601 PIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
I G GA + +IRQ+S A+I I +P G+ + + I+G+ AQ LI + SE
Sbjct: 288 GCIIGRQGAKINEIRQMSGAQIKIANPVEGSNDRQVTITGSTASISLAQYLINVRLSSE 346
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 120/273 (43%), Gaps = 67/273 (24%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T SSK LRL+V ++Q G L+GKGGC IK
Sbjct: 65 TNAIFKAFSMIIDKL---EEDISSSMTNSTASSKPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIP 258
+I D LP +++ + I G ++ + +K I +L++ P+ +IP
Sbjct: 122 EIRESTGAQVQVAGDMLPN---STERAITIAGIPQSIIECVKQICVVMLESPPKG-VTIP 177
Query: 259 GNPTGPSHPL--PDHSVSSQGAPYAT------GHR--------DVADIH--------LPM 294
P S P+ VS Q +A G R D D+H +
Sbjct: 178 YRPKPSSSPVIFAGGQVSRQAGGHACETDLWEGRRSHTGGVSLDAVDLHGAYTIQGQYAI 237
Query: 295 P-PSIPKFHE------------------SGVLDRPKPSPEILTFRLLCHDERVGGVIGKG 335
P P + K H+ SG +D S + + L ++ +G +IG+
Sbjct: 238 PQPDLTKLHQLAMQQSHFPMSHSGNTGFSGGID---ASAQTTSHELTIPNDLIGCIIGRQ 294
Query: 336 GAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
GA I ++Q +G IK+ V G+ DR + I+G
Sbjct: 295 GAKINEIRQMSGAQIKIANPVEGSNDRQVTITG 327
>gi|148226696|ref|NP_001080123.1| poly(rC) binding protein 3 [Xenopus laevis]
gi|27370875|gb|AAH41241.1| Pcbp2b protein [Xenopus laevis]
Length = 353
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 156/359 (43%), Gaps = 42/359 (11%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTNAIFK- 70
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I+ ++ ++ + V RL+V ++Q G L+GKGG I E+R+ +GA
Sbjct: 71 -AFSMIIDKLEEDISSSMTNSTASSKPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPT 493
+++ G D +P + E + I G +++ E + QI + + P P
Sbjct: 130 QVQVAG-DMLP---NSTERAITIAGIPQSIIECVKQICVVM----LESPPKGVTIPYRPK 181
Query: 494 FLDQVSPFPSFIGRRELSPPGMYSNF---------GPSFHKFDAVGGPPPPGSFH-PHDD 543
F R+ ++ G S D G G + P D
Sbjct: 182 PSSSPVIFAGGQVSRQAGGHACETDLWEGRRSHTGGVSLDAVDLHGAYTIQGQYAIPQPD 241
Query: 544 HSAFMHHIHRPGM-PPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVP--VVVPRSLV 600
+ +H+ M H P M G GF + + + +P L+
Sbjct: 242 ----LTKLHQLAMQQSHFP----------MSHSGNTGFSGGIDASAQATSHELTIPNDLI 287
Query: 601 PIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
I G GA + +IRQ+S A+I I +P G+ + + I+G+ AQ LI + SE
Sbjct: 288 GCIIGRQGAKINEIRQMSGAQIKIANPVEGSNDRQVTITGSTASISLAQYLINVRLSSE 346
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 120/273 (43%), Gaps = 67/273 (24%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T SSK LRL+V ++Q G L+GKGGC IK
Sbjct: 65 TNAIFKAFSMIIDKL---EEDISSSMTNSTASSKPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIP 258
+I D LP +++ + I G ++ + +K I +L++ P+ +IP
Sbjct: 122 EIRESTGAQVQVAGDMLPN---STERAITIAGIPQSIIECVKQICVVMLESPPKG-VTIP 177
Query: 259 GNPTGPSHPL--PDHSVSSQGAPYAT------GHR--------DVADIH--------LPM 294
P S P+ VS Q +A G R D D+H +
Sbjct: 178 YRPKPSSSPVIFAGGQVSRQAGGHACETDLWEGRRSHTGGVSLDAVDLHGAYTIQGQYAI 237
Query: 295 P-PSIPKFHE------------------SGVLDRPKPSPEILTFRLLCHDERVGGVIGKG 335
P P + K H+ SG +D S + + L ++ +G +IG+
Sbjct: 238 PQPDLTKLHQLAMQQSHFPMSHSGNTGFSGGID---ASAQATSHELTIPNDLIGCIIGRQ 294
Query: 336 GAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
GA I ++Q +G IK+ V G+ DR + I+G
Sbjct: 295 GAKINEIRQMSGAQIKIANPVEGSNDRQVTITG 327
>gi|414868822|tpg|DAA47379.1| TPA: hypothetical protein ZEAMMB73_380288 [Zea mays]
Length = 499
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 92/187 (49%), Gaps = 16/187 (8%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISA 378
FR+L +VG VIG+ G I+ + +E+ IKV+E +R ++IS PD +
Sbjct: 109 FRILVPTTKVGAVIGRKGDFIKKMCEESRARIKVLEGPPAVPERAVMISAKDEPDTELPP 168
Query: 379 PQDAVLRVQTRIARAIPDNREQ-------TVMTRLLVASNQIGCLLGKGGSIIAEMRKLS 431
D +LRV RI + +Q T TRLLV ++Q G L+GK G+ I ++ S
Sbjct: 169 AVDGLLRVHRRITDGLETETDQPQRATVNTGPTRLLVPASQAGSLIGKQGATIKSIQDAS 228
Query: 432 GAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLN 491
+RI+ + +P A ++ VV I GE +A+ I + LR ++R +
Sbjct: 229 KCVLRIV--ENVPPVALNDDRVVEIQGEPHDSHKAVELIASHLRKFL-------VDRSVL 279
Query: 492 PTFLDQV 498
P F Q+
Sbjct: 280 PLFETQI 286
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 94/216 (43%), Gaps = 60/216 (27%)
Query: 42 FPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNK 101
+PG +FR+L P +K+ VIG+ G+ + ++ +++ I+V E ER V+I A D
Sbjct: 103 WPGESVFRILVPTTKVGAVIGRKGDFIKKMCEESRARIKVLEGPPAVPERAVMISAKD-- 160
Query: 102 KETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALL 161
E L +++ R + DGL E ET + Q+A +
Sbjct: 161 -EPDTELPPAVDGLLRVHRR---------------------ITDGL--ETETDQPQRATV 196
Query: 162 LVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGG-----------CVIK 210
NT + RLLV ++Q G L+GK G CV++
Sbjct: 197 -------------------NTGPT----RLLVPASQAGSLIGKQGATIKSIQDASKCVLR 233
Query: 211 QIDKLPTCALASDEVVQITGEVDTVRKALKLISHQL 246
++ +P AL D VV+I GE KA++LI+ L
Sbjct: 234 IVENVPPVALNDDRVVEIQGEPHDSHKAVELIASHL 269
>gi|226494805|ref|NP_001148654.1| KH domain containing protein [Zea mays]
gi|195621126|gb|ACG32393.1| KH domain containing protein [Zea mays]
Length = 529
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 92/187 (49%), Gaps = 16/187 (8%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISA 378
FR+L +VG VIG+ G I+ + +E+ IKV+E +R ++IS PD +
Sbjct: 109 FRILVPTTKVGAVIGRKGDFIKKMCEESRARIKVLEGPPAVPERAVMISAKDEPDTELPP 168
Query: 379 PQDAVLRVQTRIARAIPDNREQ-------TVMTRLLVASNQIGCLLGKGGSIIAEMRKLS 431
D +LRV RI + +Q T TRLLV ++Q G L+GK G+ I ++ S
Sbjct: 169 AVDGLLRVHRRITDGLETETDQPQRATVNTGPTRLLVPASQAGSLIGKQGATIKSIQDAS 228
Query: 432 GAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLN 491
+RI+ + +P A ++ VV I GE +A+ I + LR ++R +
Sbjct: 229 KCVLRIV--ENVPPVALNDDRVVEIQGEPHDSHKAVELIASHLRKFL-------VDRSVL 279
Query: 492 PTFLDQV 498
P F Q+
Sbjct: 280 PLFETQI 286
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 94/216 (43%), Gaps = 60/216 (27%)
Query: 42 FPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNK 101
+PG +FR+L P +K+ VIG+ G+ + ++ +++ I+V E ER V+I A D
Sbjct: 103 WPGESVFRILVPTTKVGAVIGRKGDFIKKMCEESRARIKVLEGPPAVPERAVMISAKD-- 160
Query: 102 KETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALL 161
E L +++ R + DGL E ET + Q+A +
Sbjct: 161 -EPDTELPPAVDGLLRVHRR---------------------ITDGL--ETETDQPQRATV 196
Query: 162 LVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGG-----------CVIK 210
NT + RLLV ++Q G L+GK G CV++
Sbjct: 197 -------------------NTGPT----RLLVPASQAGSLIGKQGATIKSIQDASKCVLR 233
Query: 211 QIDKLPTCALASDEVVQITGEVDTVRKALKLISHQL 246
++ +P AL D VV+I GE KA++LI+ L
Sbjct: 234 IVENVPPVALNDDRVVEIQGEPHDSHKAVELIASHL 269
>gi|495128|emb|CAA53546.1| mCBP [Mus musculus]
Length = 331
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 156/358 (43%), Gaps = 60/358 (16%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTNAIFKA 71
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I+ ++ ++ + V RL+V ++Q G L+GKGG I E+R+ +GA
Sbjct: 72 FA--MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPT 493
+++ G D +P + E + I G +++ E + QI + + P P
Sbjct: 130 QVQVAG-DMLP---NSTERAITIAGIPQSIIECVKQICVVM----LESPPKGVTIPYRPK 181
Query: 494 FLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHR 553
SP F G + + G Y+ P K H M H
Sbjct: 182 --PSSSPVI-FAGGQAYTIQGQYAIPQPDLTKL-----------------HQLAMQQSHF 221
Query: 554 P---------GMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVP--VVVPRSLVPI 602
P G+ P++K G+ + + + +P L+
Sbjct: 222 PMTHGNTGFSGIESSSPEVK--------------GYWAGLDASAQTTSHELTIPNDLIGC 267
Query: 603 IQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSET 660
I GA + +IRQ+S A+I I +P G+T+ + I+G+ AQ LI + SET
Sbjct: 268 IIRRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVRLSSET 325
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 117/251 (46%), Gaps = 41/251 (16%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T +S+ LRL+V ++Q G L+GKGGC IK
Sbjct: 65 TNAIFKAFAMIIDKL---EEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIP 258
+I D LP +++ + I G ++ + +K I +L++ P+ +IP
Sbjct: 122 EIRESTGAQVQVAGDMLPN---STERAITIAGIPQSIIECVKQICVVMLESPPKG-VTIP 177
Query: 259 GNPTGPSHPL---PDHSVSSQGAPYATGHRDVADIH-LPMPPS-IPKFH-ESGVLDRPKP 312
P S P+ + + QG YA D+ +H L M S P H +G
Sbjct: 178 YRPKPSSSPVIFAGGQAYTIQGQ-YAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESS 236
Query: 313 SPEILTF-------------RLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGT 359
SPE+ + L ++ +G +I + GA I ++Q +G IK+ V G+
Sbjct: 237 SPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIRRQGAKINEIRQMSGAQIKIANPVEGS 296
Query: 360 EDRLIVISGPA 370
DR + I+G A
Sbjct: 297 TDRQVTITGSA 307
>gi|147789387|emb|CAN73316.1| hypothetical protein VITISV_043333 [Vitis vinifera]
Length = 511
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 92/165 (55%), Gaps = 18/165 (10%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPA-------H 371
+R LC +++G +I +G I++ + +T I + + VSG E+ ++ I + +
Sbjct: 294 YRYLCPGKKIGSIIRRGWKIVKQQRVDTKPKISIGDTVSGCEEHVVTIYNFSIESNVFDN 353
Query: 372 PDDRISAPQDAVLRVQTR-IARAIPD-NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRK 429
+ +S Q+ + RV R I+ + D N E+ ++QIGC++GKGG II +R
Sbjct: 354 SNTFVSPTQNVLFRVHDRVISDEVHDENFEE---------ASQIGCVIGKGGQIIQSIRS 404
Query: 430 LSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRL 474
SGA IRIL D +P +++++ I+GE V +AL+QI +RL
Sbjct: 405 ESGAQIRILKDDHLPSRVLSSDKLIQISGEPSLVMKALYQIASRL 449
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 99/233 (42%), Gaps = 70/233 (30%)
Query: 47 MFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSE 106
++R LCP KI +I + +++ Q DT I + +TVSG +E +V I
Sbjct: 293 IYRYLCPGKKIGSIIRRGWKIVKQQRVDTKPKISIGDTVSGCEEHVVTIY---------- 342
Query: 107 NLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFER 166
N E++V D NS S Q L V +R
Sbjct: 343 -----------NFSIESNVFD--------------------NSNTFVSPTQNVLFRVHDR 371
Query: 167 MVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI-------------D 213
++ EV D+ ++S Q+GC++GKGG +I+ I D
Sbjct: 372 VIS----DEVHDENFEEAS-----------QIGCVIGKGGQIIQSIRSESGAQIRILKDD 416
Query: 214 KLPTCALASDEVVQITGEVDTVRKALKLISHQLLDN-SPRDHESIPGNPTGPS 265
LP+ L+SD+++QI+GE V KAL I+ +L DN S H + PTG S
Sbjct: 417 HLPSRVLSSDKLIQISGEPSLVMKALYQIASRLHDNPSQSQHLLVXTMPTGYS 469
>gi|307136423|gb|ADN34230.1| hypothetical protein [Cucumis melo subsp. melo]
Length = 331
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 100/170 (58%), Gaps = 12/170 (7%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
+ FR++ +++G VIGK G I+ +++ET IK+ +AV+ E+R+I+IS + ++ +
Sbjct: 69 VLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDN-ENSV 127
Query: 377 SAPQDAVLRVQTRIARAIPDNREQTVM---------TRLLVASNQIGCLLGKGGSIIAEM 427
+ + A+ ++ I + + E+ + RLL+A +Q G L+G G I ++
Sbjct: 128 TDAEKALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKL 187
Query: 428 RKLSGAYIRILGKDQIPKCAS--ENEEVVLINGEFEAVQEALFQITTRLR 475
R SGA I IL +Q+P CAS E++ VV I+G+ AV +AL +I +LR
Sbjct: 188 RNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLR 237
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 100/216 (46%), Gaps = 63/216 (29%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
++FR++ P +I VIGK G + ++ ++T TI++ + V+ +ER+++I + DN
Sbjct: 69 VLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDN----- 123
Query: 106 ENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFE 165
E+SV ++ E + Q A L++ E
Sbjct: 124 ----------------------------ENSV-----------TDAEKALQQIAALILKE 144
Query: 166 RMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI------------- 212
+E E +V ++ +RLL+ +Q G L+G G I+++
Sbjct: 145 DGSSIE-ELKVGTGHVAANT---IRLLIAGSQAGSLIGASGQNIEKLRNSSGASITILAP 200
Query: 213 DKLPTCALA--SDEVVQITGEVDTVRKALKLISHQL 246
++LP CA A SD VVQI+G++ V KAL+ I +QL
Sbjct: 201 NQLPLCASAHESDRVVQISGDILAVLKALEEIGNQL 236
>gi|54037961|gb|AAH84195.1| Pcbp2 protein [Xenopus laevis]
Length = 353
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 154/351 (43%), Gaps = 26/351 (7%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTNAIFK- 70
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I+ ++ ++ + V RL+V ++Q G L+GKGG I E+R+ +GA
Sbjct: 71 -AFSMIIDKLEEDISSSMTNSTASSKPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPT 493
+++ G D +P + E + I G +++ E + QI + + P P
Sbjct: 130 QVQVAG-DMLP---NSTERAITIAGIPQSIIECVKQICVVM----LESPPKGVTIPYRPK 181
Query: 494 FLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHR 553
SP G+ G + GG S D H A++
Sbjct: 182 --PSSSPVIFAGGQVSRQAGGHACETDLWEGRRSHTGGV----SLDAVDLHGAYIIQGQY 235
Query: 554 PGMPPHMPDMKPWGPQGL---MEVGGPMGFPDFVGPPHRRVP--VVVPRSLVPIIQGEDG 608
P + + Q M G GF + + + +P L+ I G G
Sbjct: 236 AIPQPDLTKLHQLAMQQSHFPMSHSGNTGFSGGIDASAQTTSHELTIPNDLIGCIIGRQG 295
Query: 609 ACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
A + +IRQ+S A+I I +P G+ + + I+G+ AQ LI + SE
Sbjct: 296 AKINEIRQMSGAQIKIANPVEGSNDRQVTITGSTASISLAQYLINVRLSSE 346
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 120/273 (43%), Gaps = 67/273 (24%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T SSK LRL+V ++Q G L+GKGGC IK
Sbjct: 65 TNAIFKAFSMIIDKL---EEDISSSMTNSTASSKPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIP 258
+I D LP +++ + I G ++ + +K I +L++ P+ +IP
Sbjct: 122 EIRESTGAQVQVAGDMLPN---STERAITIAGIPQSIIECVKQICVVMLESPPKG-VTIP 177
Query: 259 GNPTGPSHPL--PDHSVSSQGAPYAT------GHR--------DVADIH--------LPM 294
P S P+ VS Q +A G R D D+H +
Sbjct: 178 YRPKPSSSPVIFAGGQVSRQAGGHACETDLWEGRRSHTGGVSLDAVDLHGAYIIQGQYAI 237
Query: 295 P-PSIPKFHE------------------SGVLDRPKPSPEILTFRLLCHDERVGGVIGKG 335
P P + K H+ SG +D S + + L ++ +G +IG+
Sbjct: 238 PQPDLTKLHQLAMQQSHFPMSHSGNTGFSGGID---ASAQTTSHELTIPNDLIGCIIGRQ 294
Query: 336 GAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
GA I ++Q +G IK+ V G+ DR + I+G
Sbjct: 295 GAKINEIRQMSGAQIKIANPVEGSNDRQVTITG 327
>gi|363747265|ref|XP_003643961.1| PREDICTED: poly(rC)-binding protein 2-like isoform 3 [Gallus
gallus]
Length = 320
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 153/350 (43%), Gaps = 60/350 (17%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTNAIFKA 71
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I+ ++ ++ + V RL+V ++Q G L+GKGG I E+R+ +GA
Sbjct: 72 FA--MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPT 493
+++ G D +P + E + I G +++ E + QI + + P P
Sbjct: 130 QVQVAG-DMLP---NSTERAITIAGIPQSIIECVKQICVVM----LESPPKGVTIPYRPK 181
Query: 494 FLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHR 553
SP F G + + G Y+ P K H M H
Sbjct: 182 --PSSSPV-IFAGGQAYTIQGQYAIPQPDLTKL-----------------HQLAMQQSHF 221
Query: 554 P---------GMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVP--VVVPRSLVPI 602
P G+ P++K G+ + + + +P L+
Sbjct: 222 PMSHGNTGFSGIESSSPEVK--------------GYWAGLDASAQTTSHELTIPNDLIGC 267
Query: 603 IQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLI 652
I G GA + +IRQ+S A+I I +P G+T+ + I+G+ AQ LI
Sbjct: 268 IIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLI 317
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 118/251 (47%), Gaps = 41/251 (16%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T +S+ LRL+V ++Q G L+GKGGC IK
Sbjct: 65 TNAIFKAFAMIIDKL---EEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIP 258
+I D LP +++ + I G ++ + +K I +L++ P+ +IP
Sbjct: 122 EIRESTGAQVQVAGDMLPN---STERAITIAGIPQSIIECVKQICVVMLESPPKG-VTIP 177
Query: 259 GNPTGPSHPL---PDHSVSSQGAPYATGHRDVADIH-LPMPPS-IPKFH-ESGVLDRPKP 312
P S P+ + + QG YA D+ +H L M S P H +G
Sbjct: 178 YRPKPSSSPVIFAGGQAYTIQGQ-YAIPQPDLTKLHQLAMQQSHFPMSHGNTGFSGIESS 236
Query: 313 SPEILTF-------------RLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGT 359
SPE+ + L ++ +G +IG+ GA I ++Q +G IK+ V G+
Sbjct: 237 SPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGS 296
Query: 360 EDRLIVISGPA 370
DR + I+G A
Sbjct: 297 TDRQVTITGSA 307
Score = 38.9 bits (89), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 396 DNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVL 455
D QT L + ++ IGC++G+ G+ I E+R++SGA I+I P S + +V
Sbjct: 248 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN----PVEGSTDRQVT- 302
Query: 456 INGEFEAVQEALFQITTR 473
I G ++ A + I R
Sbjct: 303 ITGSAASISLAQYLINVR 320
>gi|12597878|gb|AAG60186.1|AC084763_6 putative nucleic acid binding protein [Oryza sativa Japonica Group]
gi|31433543|gb|AAP55041.1| KH domain-containing protein, putative, expressed [Oryza sativa
Japonica Group]
gi|125532979|gb|EAY79544.1| hypothetical protein OsI_34673 [Oryza sativa Indica Group]
gi|125575714|gb|EAZ16998.1| hypothetical protein OsJ_32483 [Oryza sativa Japonica Group]
gi|215769329|dbj|BAH01558.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 458
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 151/356 (42%), Gaps = 39/356 (10%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISA 378
FRL+ +VG +IG+ G +I+ L +ET ++V+E G +R++++SG P +
Sbjct: 58 FRLVVPVLKVGSIIGRKGELIKRLVEETKAKVRVLEGPVGATERIVLVSGKEDPALELPP 117
Query: 379 PQDAVLRVQTRIARAIPDNREQT--------VMTRLLVASNQIGCLLGKGGSIIAEMRKL 430
DA++RV R++ E T RLLV Q L+GK G+ I +++
Sbjct: 118 AMDALMRVFKRVSGITDGAAEGTQAATAPGVCAARLLVPGAQAINLIGKQGASIKAIQEG 177
Query: 431 SGAYIRILGKD--QIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINR 488
+GA IR++ D + P E+E +V I GE E V +AL ++ LR + +
Sbjct: 178 TGATIRVISIDERERPFYVIEDERIVEIQGETEKVLKALQAVSNHLRKFLVDHSVLPLFE 237
Query: 489 PLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFH--PHDDHSA 546
N T V+ S ++S P + S + PPP + P
Sbjct: 238 KTNAT----VTQDRSTDAWTDISHPSIVSA---------QINQPPPVVDEYILPMKRDPL 284
Query: 547 FM-------HHIHRPGMPPHM--PDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPR 597
F+ H+IHR G+ + P + G+ G + + +P
Sbjct: 285 FLEREPLIDHNIHRSGVSLYGRDPALSTLRTSGIHGGGPGGPLLSQITQTMQ-----IPL 339
Query: 598 SLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQ 653
+ I G GA + IR S A +TI + + + + GT Q AA LIQ
Sbjct: 340 TYAEDIIGVKGANIAYIRANSGAVVTIQESLGSPDDITVEMKGTSSQVQAAYQLIQ 395
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 87/220 (39%), Gaps = 63/220 (28%)
Query: 42 FPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNK 101
+PG +FR++ PV K+ +IG+ GE++ ++ ++T +RV E G+ ER+V++
Sbjct: 52 WPGDSVFRLVVPVLKVGSIIGRKGELIKRLVEETKAKVRVLEGPVGATERIVLVSG---- 107
Query: 102 KETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALL 161
KED E MD AL+
Sbjct: 108 -------------------------------KEDPALELPPAMD-------------ALM 123
Query: 162 LVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQID-------- 213
VF+R+ + Q T RLLV Q L+GK G IK I
Sbjct: 124 RVFKRVSGITDGAAEGTQAATAPGVCAARLLVPGAQAINLIGKQGASIKAIQEGTGATIR 183
Query: 214 -------KLPTCALASDEVVQITGEVDTVRKALKLISHQL 246
+ P + + +V+I GE + V KAL+ +S+ L
Sbjct: 184 VISIDERERPFYVIEDERIVEIQGETEKVLKALQAVSNHL 223
>gi|255541092|ref|XP_002511610.1| conserved hypothetical protein [Ricinus communis]
gi|223548790|gb|EEF50279.1| conserved hypothetical protein [Ricinus communis]
Length = 363
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 98/173 (56%), Gaps = 13/173 (7%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
+ FR++ ++G VIGK G I+ +++ET IK+ +A++ E+R+I+IS D +
Sbjct: 71 VIFRIVVPSRQIGKVIGKVGCRIQKIREETKATIKIADAIARHEERVIIISS-KESDCVV 129
Query: 377 SAPQDAVLRVQTRIARAIPDNREQTVMT----------RLLVASNQIGCLLGKGGSIIAE 426
S ++A+ ++ T I + E + + RLL+A +Q G L+G G I +
Sbjct: 130 SDAENALKKIATLILKEDESPAESSKVVGAGHLGANTIRLLIAGSQAGSLIGVSGQNIEK 189
Query: 427 MRKLSGAYIRILGKDQIPKCAS--ENEEVVLINGEFEAVQEALFQITTRLRHH 477
+R SGA I +L +Q+P CAS E++ VV I+G+ V +A+ +I +LR +
Sbjct: 190 LRNSSGATITVLAPNQLPLCASAHESDRVVQISGDVPVVLKAVEEIGCQLREN 242
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 156/381 (40%), Gaps = 111/381 (29%)
Query: 6 TPSKRPHDDDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIMFRVLCPVSKIDGVIGKDG 65
T +R + D EP G + A D ++FR++ P +I VIGK G
Sbjct: 44 TAKRRRDEFDVADEPEGSAAKRAKAQD-------------VIFRIVVPSRQIGKVIGKVG 90
Query: 66 EMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASV 125
+ +I ++T TI++ + ++ +ER+++I +S+ + + +EN ++ A++
Sbjct: 91 CRIQKIREETKATIKIADAIARHEERVIII--------SSKESDCVVSDAENALKKIATL 142
Query: 126 ADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSS 185
+ D S E+SKV A L NT
Sbjct: 143 ILKEDE-----------------SPAESSKVVGAGHL----------------GANT--- 166
Query: 186 KFVLRLLVLSTQVGCLLGKGGCVIKQI-------------DKLPTCALA--SDEVVQITG 230
+RLL+ +Q G L+G G I+++ ++LP CA A SD VVQI+G
Sbjct: 167 ---IRLLIAGSQAGSLIGVSGQNIEKLRNSSGATITVLAPNQLPLCASAHESDRVVQISG 223
Query: 231 EVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADI 290
+V V KA++ I QL +N P+ SI P +++ PY
Sbjct: 224 DVPVVLKAVEEIGCQLRENPPKQVISI--------SPTYNYATVRPTQPY---------- 265
Query: 291 HLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDI 350
+ P+ S + +T ++ + VGG+IG+ G+ I ++ E+G I
Sbjct: 266 ---VDPT---------------SADYVTLEMMVSETLVGGLIGRCGSNISRIRNESGAMI 307
Query: 351 KVMEAVSGTEDRLIVISGPAH 371
KV + R I G A
Sbjct: 308 KVYGGKGEKKHRHIQFGGTAQ 328
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 111/308 (36%), Gaps = 92/308 (29%)
Query: 171 EPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI--DKLPTCALA------S 222
EPE A + K+ + R++V S Q+G ++GK GC I++I + T +A
Sbjct: 57 EPEGSAA--KRAKAQDVIFRIVVPSRQIGKVIGKVGCRIQKIREETKATIKIADAIARHE 114
Query: 223 DEVVQITGE-----VDTVRKALKLISHQLL--DNSPRDHESIPGNPTGPSHPLPDHSVSS 275
+ V+ I+ + V ALK I+ +L D SP + + G
Sbjct: 115 ERVIIISSKESDCVVSDAENALKKIATLILKEDESPAESSKVVG---------------- 158
Query: 276 QGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKG 335
GH T RLL + G +IG
Sbjct: 159 ------AGHLGAN-----------------------------TIRLLIAGSQAGSLIGVS 183
Query: 336 GAIIRSLKQETGCDIKVME-------AVSGTEDRLIVISGPA----------------HP 372
G I L+ +G I V+ A + DR++ ISG +P
Sbjct: 184 GQNIEKLRNSSGATITVLAPNQLPLCASAHESDRVVQISGDVPVVLKAVEEIGCQLRENP 243
Query: 373 DDRISAPQDAVLRVQTRIARAIPD-NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLS 431
++ + R + D V ++V+ +G L+G+ GS I+ +R S
Sbjct: 244 PKQVISISPTYNYATVRPTQPYVDPTSADYVTLEMMVSETLVGGLIGRCGSNISRIRNES 303
Query: 432 GAYIRILG 439
GA I++ G
Sbjct: 304 GAMIKVYG 311
>gi|334350025|ref|XP_003342306.1| PREDICTED: poly(rC)-binding protein 2-like [Monodelphis domestica]
gi|444513888|gb|ELV10473.1| Poly(rC)-binding protein 2 [Tupaia chinensis]
Length = 307
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 148/341 (43%), Gaps = 55/341 (16%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTNAIFKA 71
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I+ ++ ++ + V RL+V ++Q G L+GKGG I E+R+ +GA
Sbjct: 72 FA--MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPT 493
+++ G D +P + E + I G +++ E + QI + + P P
Sbjct: 130 QVQVAG-DMLP---NSTERAITIAGIPQSIIECVKQICVVM----LESPPKGVTIPYRPK 181
Query: 494 FLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHR 553
SP F G + + G Y+ P K H M H
Sbjct: 182 --PSSSPV-IFAGGQAYTIQGQYAIPQPDLTKL-----------------HQLAMQQSHF 221
Query: 554 PGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVP--VVVPRSLVPIIQGEDGACL 611
P G GF + + + +P L+ I G GA +
Sbjct: 222 P------------------MTHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKI 263
Query: 612 KQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLI 652
+IRQ+S A+I I +P G+T+ + I+G+ AQ LI
Sbjct: 264 NEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLI 304
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 116/238 (48%), Gaps = 28/238 (11%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T +S+ LRL+V ++Q G L+GKGGC IK
Sbjct: 65 TNAIFKAFAMIIDKL---EEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIP 258
+I D LP +++ + I G ++ + +K I +L++ P+ +IP
Sbjct: 122 EIRESTGAQVQVAGDMLPN---STERAITIAGIPQSIIECVKQICVVMLESPPKG-VTIP 177
Query: 259 GNPTGPSHPL---PDHSVSSQGAPYATGHRDVADIH-LPMPPS-IPKFH-ESGVLDRPKP 312
P S P+ + + QG YA D+ +H L M S P H +G
Sbjct: 178 YRPKPSSSPVIFAGGQAYTIQGQ-YAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSAGLDA 236
Query: 313 SPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPA 370
S + + L ++ +G +IG+ GA I ++Q +G IK+ V G+ DR + I+G A
Sbjct: 237 SAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSA 294
>gi|334350022|ref|XP_003342305.1| PREDICTED: poly(rC)-binding protein 2-like [Monodelphis domestica]
Length = 320
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 153/350 (43%), Gaps = 60/350 (17%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTNAIFKA 71
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I+ ++ ++ + V RL+V ++Q G L+GKGG I E+R+ +GA
Sbjct: 72 FA--MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPT 493
+++ G D +P + E + I G +++ E + QI + + P P
Sbjct: 130 QVQVAG-DMLP---NSTERAITIAGIPQSIIECVKQICVVM----LESPPKGVTIPYRPK 181
Query: 494 FLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHR 553
SP F G + + G Y+ P K H M H
Sbjct: 182 --PSSSPV-IFAGGQAYTIQGQYAIPQPDLTKL-----------------HQLAMQQSHF 221
Query: 554 P---------GMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVP--VVVPRSLVPI 602
P G+ P++K G+ + + + +P L+
Sbjct: 222 PMTHGNTGFSGIESSSPEVK--------------GYWAGLDASAQTTSHELTIPNDLIGC 267
Query: 603 IQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLI 652
I G GA + +IRQ+S A+I I +P G+T+ + I+G+ AQ LI
Sbjct: 268 IIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLI 317
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 118/251 (47%), Gaps = 41/251 (16%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T +S+ LRL+V ++Q G L+GKGGC IK
Sbjct: 65 TNAIFKAFAMIIDKL---EEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIP 258
+I D LP +++ + I G ++ + +K I +L++ P+ +IP
Sbjct: 122 EIRESTGAQVQVAGDMLPN---STERAITIAGIPQSIIECVKQICVVMLESPPKG-VTIP 177
Query: 259 GNPTGPSHPL---PDHSVSSQGAPYATGHRDVADIH-LPMPPS-IPKFH-ESGVLDRPKP 312
P S P+ + + QG YA D+ +H L M S P H +G
Sbjct: 178 YRPKPSSSPVIFAGGQAYTIQGQ-YAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESS 236
Query: 313 SPEILTF-------------RLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGT 359
SPE+ + L ++ +G +IG+ GA I ++Q +G IK+ V G+
Sbjct: 237 SPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGS 296
Query: 360 EDRLIVISGPA 370
DR + I+G A
Sbjct: 297 TDRQVTITGSA 307
Score = 38.9 bits (89), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 396 DNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVL 455
D QT L + ++ IGC++G+ G+ I E+R++SGA I+I P S + +V
Sbjct: 248 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN----PVEGSTDRQVT- 302
Query: 456 INGEFEAVQEALFQITTR 473
I G ++ A + I R
Sbjct: 303 ITGSAASISLAQYLINVR 320
>gi|363747267|ref|XP_423701.3| PREDICTED: poly(rC)-binding protein 2-like isoform 4 [Gallus
gallus]
Length = 307
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 149/341 (43%), Gaps = 55/341 (16%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTNAIFKA 71
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I+ ++ ++ + V RL+V ++Q G L+GKGG I E+R+ +GA
Sbjct: 72 FA--MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPT 493
+++ G D +P + E + I G +++ E + QI + + P P
Sbjct: 130 QVQVAG-DMLP---NSTERAITIAGIPQSIIECVKQICVVM----LESPPKGVTIPYRPK 181
Query: 494 FLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHR 553
SP F G + + G Y+ P K H M H
Sbjct: 182 --PSSSPV-IFAGGQAYTIQGQYAIPQPDLTKL-----------------HQLAMQQSHF 221
Query: 554 PGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVP--VVVPRSLVPIIQGEDGACL 611
P H G GF + + + +P L+ I G GA +
Sbjct: 222 P--MSH----------------GNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKI 263
Query: 612 KQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLI 652
+IRQ+S A+I I +P G+T+ + I+G+ AQ LI
Sbjct: 264 NEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLI 304
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 116/238 (48%), Gaps = 28/238 (11%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T +S+ LRL+V ++Q G L+GKGGC IK
Sbjct: 65 TNAIFKAFAMIIDKL---EEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIP 258
+I D LP +++ + I G ++ + +K I +L++ P+ +IP
Sbjct: 122 EIRESTGAQVQVAGDMLPN---STERAITIAGIPQSIIECVKQICVVMLESPPKG-VTIP 177
Query: 259 GNPTGPSHPL---PDHSVSSQGAPYATGHRDVADIH-LPMPPS-IPKFH-ESGVLDRPKP 312
P S P+ + + QG YA D+ +H L M S P H +G
Sbjct: 178 YRPKPSSSPVIFAGGQAYTIQGQ-YAIPQPDLTKLHQLAMQQSHFPMSHGNTGFSAGLDA 236
Query: 313 SPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPA 370
S + + L ++ +G +IG+ GA I ++Q +G IK+ V G+ DR + I+G A
Sbjct: 237 SAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSA 294
>gi|357507881|ref|XP_003624229.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355499244|gb|AES80447.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 275
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 99/170 (58%), Gaps = 12/170 (7%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
+ FR++ +++G VIGK G I+ +++ T +IK+ +A++ E+R+I+IS + D+ +
Sbjct: 100 VIFRIVVPSKQIGKVIGKEGCRIQKIREMTRANIKIADAIARHEERVIIISSKDN-DEMV 158
Query: 377 SAPQDAVLRVQTRIARAIPDNREQTVMT---------RLLVASNQIGCLLGKGGSIIAEM 427
+ + A+ ++ I + + + + +T RLL+A +Q G L+G G I ++
Sbjct: 159 TDAEKALEQIANLILKEDNSSFDASKLTAGHVAANTIRLLIAGSQAGGLIGMSGQNIEKL 218
Query: 428 RKLSGAYIRILGKDQIPKCAS--ENEEVVLINGEFEAVQEALFQITTRLR 475
R SGA I +L Q+P CAS E++ VV ++G+ V +AL +I +LR
Sbjct: 219 RNSSGAMITVLAPSQLPLCASAHESDRVVQLSGDVSTVMKALEEIGCQLR 268
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 98/216 (45%), Gaps = 63/216 (29%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
++FR++ P +I VIGK+G + +I + T I++ + ++ +ER+++I + DN E
Sbjct: 100 VIFRIVVPSKQIGKVIGKEGCRIQKIREMTRANIKIADAIARHEERVIIISSKDN-DEMV 158
Query: 106 ENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFE 165
+ E ++E+ N +++ NS + SK+
Sbjct: 159 TDAEKALEQIAN------------------------LILKEDNSSFDASKLTAG------ 188
Query: 166 RMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI------------- 212
VA NT +RLL+ +Q G L+G G I+++
Sbjct: 189 ---------HVA--ANT------IRLLIAGSQAGGLIGMSGQNIEKLRNSSGAMITVLAP 231
Query: 213 DKLPTCALA--SDEVVQITGEVDTVRKALKLISHQL 246
+LP CA A SD VVQ++G+V TV KAL+ I QL
Sbjct: 232 SQLPLCASAHESDRVVQLSGDVSTVMKALEEIGCQL 267
>gi|74007267|ref|XP_548937.2| PREDICTED: poly(rC)-binding protein 1-like [Canis lupus familiaris]
Length = 362
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 155/366 (42%), Gaps = 46/366 (12%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G + ++E+G I + E +R+I ++GP +
Sbjct: 14 LTIRLLMHRKEVGSIIGKKGESPKRFRKESGARINISEG--NCPERIITLTGPT--NAIF 69
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I ++ ++ + V RL+V + Q G L+GKGG I E+R+ +GA
Sbjct: 70 KAFVMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPAYQCGSLIGKGGCKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSI-NRPLNP 492
+++ G D +P + E + I G ++V E + QI + + + P P
Sbjct: 130 QVQVAG-DMLP---NSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQP 185
Query: 493 TFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPG-------SFHPHD--- 542
+ SP G+ Y + H + GPP + P D
Sbjct: 186 --MPASSPVICAGGQDRWGYAAGYPHAAGYPHDTHYLEGPPLDAYSIQGQHTVSPLDLAK 243
Query: 543 --------DHSAFMH-HIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPV 593
H A MH G+ + P++K + +
Sbjct: 244 LNQVARQQSHFAMMHGGTGFAGIDSNSPEVKGY-------------WASLDASTQTTHEF 290
Query: 594 VVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQ 653
+P +L+ I G GA + +IRQ+S A+I I +P G++ + I+G+ AQ LI
Sbjct: 291 TIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLIN 350
Query: 654 AFVMSE 659
A + SE
Sbjct: 351 ARLSSE 356
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 117/283 (41%), Gaps = 73/283 (25%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA +++ +++ E + + +T +S+ LRL+V + Q G L+GKGGC IK
Sbjct: 65 TNAIFKAFVMIIDKL---EEDINSSMTNSTAASRPPVTLRLVVPAYQCGSLIGKGGCKIK 121
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALK---LISHQLLDNSPRDH- 254
+I D LP +++ + I G +V + +K L+ + L SP+
Sbjct: 122 EIRESTGAQVQVAGDMLPN---STERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRV 178
Query: 255 ESIPGNPTGPSHPL-----PDHSVSSQGAPYATGHRDVADIH-LPMPP----SIPKFHES 304
+IP P S P+ D + G P+A G+ D H L PP SI H
Sbjct: 179 MTIPYQPMPASSPVICAGGQDRWGYAAGYPHAAGYPH--DTHYLEGPPLDAYSIQGQHTV 236
Query: 305 GVLDRPK-------------------------PSPEI------------LTFRLLCHDER 327
LD K SPE+ T +
Sbjct: 237 SPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSNSPEVKGYWASLDASTQTTHEFTIPNNL 296
Query: 328 VGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPA 370
+G +IG+ GA I ++Q +G IK+ V G+ R + I+G A
Sbjct: 297 IGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSA 339
>gi|432848574|ref|XP_004066413.1| PREDICTED: poly(rC)-binding protein 3-like [Oryzias latipes]
Length = 349
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 149/343 (43%), Gaps = 32/343 (9%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++++G I + E +R +++
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREDSGARINISEG--NCPER--IVTXXXXXXXIF 71
Query: 377 SAPQDAVLRVQTRIARAI---PDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + + I ++ P + V RL+V ++Q G L+GKGGS I EMR+ +GA
Sbjct: 72 KAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGA 131
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDA-FPSINRPLNP 492
+++ G D +P + E V I+G EA+ + + QI + + A P +P +
Sbjct: 132 QVQVAG-DMLP---NSTERAVTISGAPEAIIQCVKQICVVMLESPPKGATIPYRPKPAS- 186
Query: 493 TFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFH-PHDDHSAFMHHI 551
+P G+ P G + + + G + PH D + +
Sbjct: 187 ------TPVIFSGGQVRADPLGASTANLSLLLQHQPLPAYTIQGQYAIPHPD----LSKL 236
Query: 552 HRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACL 611
H+ M P+ P G P H + +P L+ I G G +
Sbjct: 237 HQLAM-----QQTPFTPLGQTTPAFPGLDASNQASTHE---LTIPNDLIGCIIGRQGTKI 288
Query: 612 KQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQA 654
+IRQ+S A+I I + G++E I I+GTP AQ LI A
Sbjct: 289 NEIRQMSGAQIKIANAMEGSSERQITITGTPANISLAQYLINA 331
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 99/223 (44%), Gaps = 50/223 (22%)
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQI------------DKLPTCALASDEVVQITGEVDTVR 236
LRL+V ++Q G L+GKGG IK++ D LP +++ V I+G + +
Sbjct: 102 LRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLPN---STERAVTISGAPEAII 158
Query: 237 KALKLISHQLLDNSPRDHESIP------------------GNPTGPS----------HPL 268
+ +K I +L++ P+ +IP +P G S PL
Sbjct: 159 QCVKQICVVMLESPPKG-ATIPYRPKPASTPVIFSGGQVRADPLGASTANLSLLLQHQPL 217
Query: 269 PDHSVSSQGAPYATGHRDVADIH---LPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHD 325
P +++ Q YA H D++ +H + P P + S + T L +
Sbjct: 218 PAYTIQGQ---YAIPHPDLSKLHQLAMQQTPFTPLGQTTPAFPGLDASNQASTHELTIPN 274
Query: 326 ERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
+ +G +IG+ G I ++Q +G IK+ A+ G+ +R I I+G
Sbjct: 275 DLIGCIIGRQGTKINEIRQMSGAQIKIANAMEGSSERQITITG 317
>gi|302839775|ref|XP_002951444.1| hypothetical protein VOLCADRAFT_105091 [Volvox carteri f.
nagariensis]
gi|300263419|gb|EFJ47620.1| hypothetical protein VOLCADRAFT_105091 [Volvox carteri f.
nagariensis]
Length = 1261
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 99/196 (50%), Gaps = 16/196 (8%)
Query: 311 KPS-PEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGP 369
KP+ P+ + FRLLCH+ + G VIGKGG +R++++ +G ++ V + G R+I+I
Sbjct: 56 KPAVPKGIHFRLLCHEGQAGAVIGKGGDTVRNIRKNSGAEVSVQPPIQGHRLRVIIID-- 113
Query: 370 AHPDDRI--SAPQD------AVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLG--- 418
+ P +R S P A+L V+ PD + V RLLV S LLG
Sbjct: 114 SSPGNRAVPSYPAKEALLTCAMLTVEGDQPLNAPDP-SKLVDVRLLVHSALAAGLLGLKH 172
Query: 419 KGGSIIA-EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHH 477
GS+ A ++ GA + I G+ + PK A +EE +L+ G + AV AL + +R
Sbjct: 173 SHGSLAAGDISARCGANVIIPGEAERPKLAEADEEYLLLRGPWPAVYAALGMVADEVRRQ 232
Query: 478 FFRDAFPSINRPLNPT 493
FF P + L P
Sbjct: 233 FFELRDPHVEPTLGPA 248
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 85/183 (46%), Gaps = 10/183 (5%)
Query: 298 IPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCD-IKVMEAV 356
+P+F S +P +T++L+ + + G IGKGG +R ++ G +KV AV
Sbjct: 330 VPEFRSSAEAS----TPIAVTYKLVVPESKAGRFIGKGGENLRDMRLALGLSTLKVHPAV 385
Query: 357 SGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPD----NREQTVMTRLLVASNQ 412
T R++ +S A DA+L R+ + P NR + + ++L+
Sbjct: 386 KDTSVRVLEVSSTEPAASNRCAAADALLYYVERLGQNTPQGAGGNRGR-ITIKMLLQQQH 444
Query: 413 IGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITT 472
G ++G ++I ++ L+ A + K +P + +++ + G+ + V EA+ +
Sbjct: 445 CGPVVGPRAAVIRQISALTKASCVVHKKGDVPPYGAPDDQELEAEGDAQHVFEAIRIVAA 504
Query: 473 RLR 475
+R
Sbjct: 505 IVR 507
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 49/94 (52%), Gaps = 12/94 (12%)
Query: 9 KRPHDDDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIMFRVLCPVSKIDGVIGKDGEMM 68
++P D DN KEK+++ + + P GI FR+LC + VIGK G+ +
Sbjct: 38 RKPQDKDN------KEKAKRRRSE------KPAVPKGIHFRLLCHEGQAGAVIGKGGDTV 85
Query: 69 SQISQDTGVTIRVEETVSGSDERLVVIEASDNKK 102
I +++G + V+ + G R+++I++S +
Sbjct: 86 RNIRKNSGAEVSVQPPIQGHRLRVIIIDSSPGNR 119
>gi|308321889|gb|ADO28082.1| poly(rc)-binding protein 2 [Ictalurus furcatus]
Length = 318
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 148/346 (42%), Gaps = 51/346 (14%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTTAIFK- 70
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I+ ++ ++ + V R++V ++Q G L+GKGG I E+R+ +GA
Sbjct: 71 -AFSMIIDKLEEDISSSMSNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPT 493
+++ G D +P + E + I G ++ E + QI + + P P
Sbjct: 130 QVQVAG-DMLP---NSTERAITIAGTPLSIIECVKQICVVM----LESPPKGVTIPYRPK 181
Query: 494 FLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHR 553
SP +F G + + G ++ P K + P P
Sbjct: 182 --PSGSPV-TFAGGQAYAVQGQHAIPQPDLTKLHQLAMQQSPFPLAPSSQ---------- 228
Query: 554 PGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQ 613
G M G L +P L+ I G GA + +
Sbjct: 229 -GFTAGMDATTQTGSHEL----------------------TIPNDLIGCIIGRQGAKINE 265
Query: 614 IRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
IRQ+S A+I I +P G+ + + I+G+P A+ LI A + SE
Sbjct: 266 IRQMSGAQIKIANPVEGSNDRQVTITGSPASISLAEYLINARLSSE 311
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 110/242 (45%), Gaps = 40/242 (16%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI 212
T+ + KA ++ +++ E + + +++ T LR++V ++Q G L+GKGGC IK+I
Sbjct: 65 TTAIFKAFSMIIDKLEE-DISSSMSNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEI 123
Query: 213 ------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGN 260
D LP +++ + I G ++ + +K I +L++ P+ +IP
Sbjct: 124 RESTGAQVQVAGDMLPN---STERAITIAGTPLSIIECVKQICVVMLESPPKGV-TIPYR 179
Query: 261 PTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKP-------- 312
P P+ + G YA V H P + K H+ + P P
Sbjct: 180 PKPSGSPV----TFAGGQAYA-----VQGQHAIPQPDLTKLHQLAMQQSPFPLAPSSQGF 230
Query: 313 ------SPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVI 366
+ + + L ++ +G +IG+ GA I ++Q +G IK+ V G+ DR + I
Sbjct: 231 TAGMDATTQTGSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSNDRQVTI 290
Query: 367 SG 368
+G
Sbjct: 291 TG 292
>gi|209156062|gb|ACI34263.1| PolyrC-binding protein 2 [Salmo salar]
Length = 318
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 153/346 (44%), Gaps = 51/346 (14%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTTAIFK- 70
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I+ ++ ++ + V R++V ++Q G L+GKGG I E+R+ +GA
Sbjct: 71 -AFSMIIEKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPT 493
+++ G D +P + E + I G +++ E + QI + + P P
Sbjct: 130 QVQVAG-DMLP---NSTERAITIAGTPQSIIECVKQICVVM----LESPPKGVTIPYRPK 181
Query: 494 FLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHR 553
SP F G + + G ++ P K H M
Sbjct: 182 --PSGSPV-IFAGGQAYAVQGQHAIPQPDLTKL-----------------HQLAMQQSPF 221
Query: 554 PGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQ 613
P M P+ P G QG M+ + +P L+ I G G+ + +
Sbjct: 222 P-MGPNNP-----GFQGGMDASAQTSSHEM----------TIPNDLIGCIIGRQGSKINE 265
Query: 614 IRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
IRQ+S A+I I +P G+ + + I+G+ A+ LI A + SE
Sbjct: 266 IRQMSGAQIKIANPVEGSADRQVTITGSAASISLAEYLINARLSSE 311
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 114/246 (46%), Gaps = 44/246 (17%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI 212
T+ + KA ++ E++ E + + + + T LR++V ++Q G L+GKGGC IK+I
Sbjct: 65 TTAIFKAFSMIIEKLEE-DISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEI 123
Query: 213 ------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGN 260
D LP +++ + I G ++ + +K I +L++ P+
Sbjct: 124 RESTGAQVQVAGDMLPN---STERAITIAGTPQSIIECVKQICVVMLESPPK-------G 173
Query: 261 PTGPSHPLPDHS--VSSQGAPYATGHR------DVADIH--------LPMPPSIPKFHES 304
T P P P S + + G YA + D+ +H PM P+ P F
Sbjct: 174 VTIPYRPKPSGSPVIFAGGQAYAVQGQHAIPQPDLTKLHQLAMQQSPFPMGPNNPGFQ-- 231
Query: 305 GVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLI 364
G +D S + + + ++ +G +IG+ G+ I ++Q +G IK+ V G+ DR +
Sbjct: 232 GGMD---ASAQTSSHEMTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANPVEGSADRQV 288
Query: 365 VISGPA 370
I+G A
Sbjct: 289 TITGSA 294
>gi|390604812|gb|EIN14203.1| hypothetical protein PUNSTDRAFT_95868 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 330
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 143/351 (40%), Gaps = 60/351 (17%)
Query: 314 PEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPD 373
P+ LT R L + G +IGKGG + L+ +TG V + V G DR++ ISG
Sbjct: 25 PDTLTLRALVSTKDAGVIIGKGGKNVADLRDQTGVKAGVSKVVPGVHDRVLTISGSV--- 81
Query: 374 DRISAPQDAVLR--VQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLS 431
DR++ ++ V + I + RLL++ N +G ++G+GG+ I ++ S
Sbjct: 82 DRVAKAYGLIVAQLVASNPTSPISASSSTHTSLRLLISHNLMGTIIGRGGTRIKAIQDNS 141
Query: 432 GAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLN 491
GA + + KD +P+ E VV ++G EA++ A+ I L + R + +
Sbjct: 142 GARM-VASKDMLPQS---TERVVEVHGSVEAIERAVDDIGKSLLEDWERGLGTVL---FH 194
Query: 492 PTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHI 551
P D+ S RR G Y GS +
Sbjct: 195 PGAGDERSGSS----RRYSENRGSYG------------------GSRQSNG--------- 223
Query: 552 HRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACL 611
RPG P P PQ P R + +P +V I G G+ +
Sbjct: 224 -RPGSPGSPSRQAPSSPQ-------PTNL--------RTQNISIPSDMVGCIIGRGGSKI 267
Query: 612 KQIRQISDAKITITD-PKPGATETVIIISGTPEQTHAAQSLIQAFVMSETE 661
+IR++S +KI+I P E + I GTPE A L+ + SE E
Sbjct: 268 TEIRRLSGSKISIAKAPHDETGERMFTIVGTPEANEKALFLLYNQLESEKE 318
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 100/219 (45%), Gaps = 36/219 (16%)
Query: 155 KVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI-- 212
+V KA L+ ++V P + ++ +T +S LRLL+ +G ++G+GG IK I
Sbjct: 83 RVAKAYGLIVAQLVASNPTSPISASSSTHTS---LRLLISHNLMGTIIGRGGTRIKAIQD 139
Query: 213 ----------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNP- 261
D LP +++ VV++ G V+ + +A+ I LL++ R ++ +P
Sbjct: 140 NSGARMVASKDMLPQ---STERVVEVHGSVEAIERAVDDIGKSLLEDWERGLGTVLFHPG 196
Query: 262 -----TGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEI 316
+G S ++ S G+ + G P P P P+P+ +
Sbjct: 197 AGDERSGSSRRYSENRGSYGGSRQSNGR--------PGSPGSPSRQAP---SSPQPT-NL 244
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA 355
T + + VG +IG+GG+ I +++ +G I + +A
Sbjct: 245 RTQNISIPSDMVGCIIGRGGSKITEIRRLSGSKISIAKA 283
>gi|410982764|ref|XP_003997718.1| PREDICTED: RNA-binding protein Nova-2 [Felis catus]
Length = 372
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 92/366 (25%), Positives = 159/366 (43%), Gaps = 73/366 (19%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA---VSGTEDRLIVISGPAHPDDR 375
++L G +IGKGG I L++ETG IK+ ++ GT +R+ ++ G A +
Sbjct: 43 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 102
Query: 376 ISA---------PQDA-------VLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGK 419
+ + PQ +L+ QT + PD +Q +L+V ++ G ++GK
Sbjct: 103 VHSFIAEKVREIPQAMTKPEVVNILQPQTTMN---PDRAKQA---KLIVPNSTAGLIIGK 156
Query: 420 GGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFF 479
GG+ + + + SGA++++ Q P+ + E VV ++GE E V +A+ I +++
Sbjct: 157 GGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQED-- 211
Query: 480 RDAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFH 539
P + LN ++ + P +N P+ + + P
Sbjct: 212 ----PQSSSCLNISYANVAGPV---------------ANSNPTGSPYAS------PADVL 246
Query: 540 PHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGG-PMGFPDFVGPPHRR--VPVVVP 596
P ++ G+ GP GL VG P P F G + V + VP
Sbjct: 247 PAAAAASAAAAS---GL---------LGPAGLAGVGAFPAALPAFSGTDLAKELVEIAVP 294
Query: 597 RSLVPIIQGEDGACLKQIRQISDAKITITDPK---PGATETVIIISGTPEQTHAAQSLIQ 653
+LV I G+ G L + ++++ A+I I+ PG + I+G+P T AAQ LI
Sbjct: 295 ENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQYLIS 354
Query: 654 AFVMSE 659
V E
Sbjct: 355 QRVTYE 360
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 93/212 (43%), Gaps = 45/212 (21%)
Query: 190 RLLVLSTQVGCLLGKGGCVIK----------QIDKLPTCALASDEVVQITGEVDTVRKAL 239
+L+V ++ G ++GKGG +K Q+ + P + VV ++GE + V KA+
Sbjct: 142 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAV 201
Query: 240 KLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYAT----------------- 282
I ++ ++ P+ + + + P+ + + + G+PYA+
Sbjct: 202 SAIVQKVQED-PQSSSCLNISYANVAGPVANSNPT--GSPYASPADVLPAAAAASAAAAS 258
Query: 283 ---GHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAII 339
G +A + P ++P F + D K EI + VG ++GKGG +
Sbjct: 259 GLLGPAGLAGVG-AFPAALPAFSGT---DLAKELVEIAV-----PENLVGAILGKGGKTL 309
Query: 340 RSLKQETGCDIKVM---EAVSGTEDRLIVISG 368
++ TG I++ E + GT +R + I+G
Sbjct: 310 VEYQELTGARIQISKKGEFLPGTRNRRVTITG 341
>gi|340959534|gb|EGS20715.1| hypothetical protein CTHT_0025510 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 373
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 143/358 (39%), Gaps = 75/358 (20%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT R L + G +IGKGG + +L++ETG V + V G DR++ I+G
Sbjct: 51 LTLRALVSSKEAGVIIGKGGQNVANLREETGVKAGVSKVVQGVYDRVLTITGGC------ 104
Query: 377 SAPQDAVLRVQTRIARAIPDNREQTVM-----------TRLLVASNQIGCLLGKGGSIIA 425
DAV R +ARA+ + M +LL++ NQ+G ++G+ G I
Sbjct: 105 ----DAVSRAYAVVARALLEGAPAVSMGGVVQHNGTHPIKLLISHNQMGTIIGRQGQRIK 160
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPS 485
++ +SG + + K+ +P+ E +V + G E +Q A+++I L + R
Sbjct: 161 YIQDVSGVRM-VAQKEMLPQS---TERIVEVQGTPEGIQRAVWEICKCLVDDWQRGTGTV 216
Query: 486 INRPLNPTFLDQVSPFPSFIGRRELSPPGM--YSNFGPSF-HKFDAVGGPPPPGSFHPHD 542
NP QV F G R L +SN S+ + D+ GGP P
Sbjct: 217 F---YNPAVRTQVGGFHDRYGSRVLRTGNGADFSNGSRSYGRRSDSEGGPRGP------- 266
Query: 543 DHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPI 602
P H D G + + +P +V
Sbjct: 267 --------------PTH----------------------DENGEEIQTQNISIPADMVGC 290
Query: 603 IQGEDGACLKQIRQISDAKITITD-PKPGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
I G G+ + +IR+ S A+I+I P E + I GT + A L+ + +E
Sbjct: 291 IIGRGGSKISEIRKTSGARISIAKAPHDETGERMFTIMGTAKANETALFLLYENLEAE 348
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 90/205 (43%), Gaps = 27/205 (13%)
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQIDKLPTCAL---------ASDEVVQITGEVDTVRKAL 239
++LL+ Q+G ++G+ G IK I + + +++ +V++ G + +++A+
Sbjct: 139 IKLLISHNQMGTIIGRQGQRIKYIQDVSGVRMVAQKEMLPQSTERIVEVQGTPEGIQRAV 198
Query: 240 KLISHQLLDNSPRDHESIPGNPT-----GPSHPLPDHSV--SSQGAPYATGHRDVA--DI 290
I L+D+ R ++ NP G H V + GA ++ G R
Sbjct: 199 WEICKCLVDDWQRGTGTVFYNPAVRTQVGGFHDRYGSRVLRTGNGADFSNGSRSYGRRSD 258
Query: 291 HLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDI 350
P P E+G EI T + + VG +IG+GG+ I +++ +G I
Sbjct: 259 SEGGPRGPPTHDENG--------EEIQTQNISIPADMVGCIIGRGGSKISEIRKTSGARI 310
Query: 351 KVMEA-VSGTEDRLIVISGPAHPDD 374
+ +A T +R+ I G A ++
Sbjct: 311 SIAKAPHDETGERMFTIMGTAKANE 335
>gi|213511793|ref|NP_001133381.1| poly(rC)-binding protein 2 [Salmo salar]
gi|209152662|gb|ACI33123.1| PolyrC-binding protein 2 [Salmo salar]
Length = 327
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 153/346 (44%), Gaps = 42/346 (12%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTTAIFK- 70
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I+ ++ ++ + V R++V ++Q G L+GKGG I E+R+ +GA
Sbjct: 71 -AFSMIIEKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPT 493
+++ G D +P + E + I G +++ E + QI + + P P
Sbjct: 130 QVQVAG-DMLP---NSTERAITIAGTPQSIIECVKQICVVM----LESPPKGVTIPYRPK 181
Query: 494 FLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHR 553
SP F G + + G ++ P P S +H +
Sbjct: 182 --PSGSPV-IFAGGQAYAVQGQHAI-------------PQPDSSSASISPQLTKLHQLAM 225
Query: 554 PGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQ 613
P M P G QG M+ + +P L+ I G G+ + +
Sbjct: 226 QQSPFPMGPNNP-GFQGGMDASAQTSSHEM----------TIPNDLIGCIIGRQGSKINE 274
Query: 614 IRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
IRQ+S A+I I +P G+ + + I+G+ A+ LI A + SE
Sbjct: 275 IRQMSGAQIKIANPVEGSADRQVTITGSAASISLAEYLINARLSSE 320
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 113/252 (44%), Gaps = 47/252 (18%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI 212
T+ + KA ++ E++ E + + + + T LR++V ++Q G L+GKGGC IK+I
Sbjct: 65 TTAIFKAFSMIIEKLEE-DISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEI 123
Query: 213 ------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGN 260
D LP +++ + I G ++ + +K I +L++ P+ +IP
Sbjct: 124 RESTGAQVQVAGDMLPN---STERAITIAGTPQSIIECVKQICVVMLESPPKGV-TIPYR 179
Query: 261 PTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMP--------PSIPKFHESGVLDRPKP 312
P P+ + + G YA + +P P P + K H+ + P P
Sbjct: 180 PKPSGSPV----IFAGGQAYAVQGQHA----IPQPDSSSASISPQLTKLHQLAMQQSPFP 231
Query: 313 --------------SPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSG 358
S + + + ++ +G +IG+ G+ I ++Q +G IK+ V G
Sbjct: 232 MGPNNPGFQGGMDASAQTSSHEMTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANPVEG 291
Query: 359 TEDRLIVISGPA 370
+ DR + I+G A
Sbjct: 292 SADRQVTITGSA 303
>gi|363808250|ref|NP_001242748.1| uncharacterized protein LOC100819415 [Glycine max]
gi|255637181|gb|ACU18921.1| unknown [Glycine max]
Length = 318
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 124/324 (38%), Gaps = 59/324 (18%)
Query: 365 VISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQT------VMTRLLVASNQIGCLLG 418
++S PD I D +LRV ++ P + V+TRLLVA Q G L+G
Sbjct: 1 MVSAKEEPDCSIPPAVDVLLRVHKQVVNVDPHPADSASGAGRPVVTRLLVADTQAGSLIG 60
Query: 419 KGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHF 478
K GS I + +G IRILG + +P A ++ VV I GE V +A+ + LR
Sbjct: 61 KQGSTIKSFQDATGCNIRILGSEHLPVFALRDDSVVEIQGESSGVHKAVELVAIHLRKFL 120
Query: 479 FRDAF-----PSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYS---------------- 517
+ + RP + V P P + PP +
Sbjct: 121 VDRSIVVVFETQMQRP-DVRVNQNVPPGPP---HQPWGPPQGFQAPGPGSGGGPVFPPNP 176
Query: 518 NFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGP 577
+ P H +D PP P D H+H+ P ++ D
Sbjct: 177 QYMPPSHNYDNYY---PPADLPPMDK------HLHQGPAPAYVRDAS------------- 214
Query: 578 MGFPDFVGPPHRRVPVVV------PRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGA 631
MG P + V V P S + G GA + IR+ S A ITI + +
Sbjct: 215 MGIHSSSAQPQQSVVTKVTQHMQIPLSYADAVIGASGANISYIRRASGASITIQETRGVP 274
Query: 632 TETVIIISGTPEQTHAAQSLIQAF 655
E + ISGT Q AAQ L+Q F
Sbjct: 275 GEMTVEISGTASQIQAAQQLVQVF 298
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 49/100 (49%), Gaps = 15/100 (15%)
Query: 160 LLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI------- 212
LL V +++V V+P AD + V RLLV TQ G L+GK G IK
Sbjct: 19 LLRVHKQVVNVDPHP--ADSASGAGRPVVTRLLVADTQAGSLIGKQGSTIKSFQDATGCN 76
Query: 213 ------DKLPTCALASDEVVQITGEVDTVRKALKLISHQL 246
+ LP AL D VV+I GE V KA++L++ L
Sbjct: 77 IRILGSEHLPVFALRDDSVVEIQGESSGVHKAVELVAIHL 116
>gi|449524744|ref|XP_004169381.1| PREDICTED: poly(rC)-binding protein 3-like [Cucumis sativus]
Length = 224
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 89/154 (57%), Gaps = 10/154 (6%)
Query: 294 MPPSIPKFHE----SGVLDRPKPS-PEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGC 348
+PPS HE +G D+ P P FRL+ +VG +IG+ G +I+ + +ET
Sbjct: 53 VPPSDSAAHEPSNHTGPSDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRA 112
Query: 349 DIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMT---- 404
I+V++ GT DR+++ISG + +S DAV+RV R++ + +N ++ +
Sbjct: 113 RIRVLDGAVGTPDRVVLISGKEELESPLSPAMDAVIRVFKRVS-GLSENEDEAKASFCSI 171
Query: 405 RLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRIL 438
RLLVAS Q L+GK GS+I +++ +GA +R+L
Sbjct: 172 RLLVASTQAINLIGKQGSLIKSIQESTGASVRVL 205
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 87/203 (42%), Gaps = 67/203 (33%)
Query: 12 HDDDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQI 71
H+ NHT P+ K K G +PG +FR++ PV K+ +IG+ G+++ ++
Sbjct: 61 HEPSNHTGPSDK----KWPG----------WPGDCVFRLIVPVVKVGSIIGRKGDLIKKM 106
Query: 72 SQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASVADESDN 131
++T IRV + G+ +R+V+I +G+EE
Sbjct: 107 CEETRARIRVLDGAVGTPDRVVLI----------------------SGKEEL-------- 136
Query: 132 KKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRL 191
E S A++ VF+R+ + +++ K+S +RL
Sbjct: 137 ------------------ESPLSPAMDAVIRVFKRVSGLS-----ENEDEAKASFCSIRL 173
Query: 192 LVLSTQVGCLLGKGGCVIKQIDK 214
LV STQ L+GK G +IK I +
Sbjct: 174 LVASTQAINLIGKQGSLIKSIQE 196
>gi|432873594|ref|XP_004072294.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Oryzias
latipes]
Length = 433
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 102/418 (24%), Positives = 161/418 (38%), Gaps = 93/418 (22%)
Query: 307 LDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVI 366
R + S E++ R+L + G VIGKGG I++L+ + + V ++ SG E R++
Sbjct: 33 FKRSRNSDEMVELRILLQSKNAGAVIGKGGKNIKALRSDYNASVSVPDS-SGPE-RILS- 89
Query: 367 SGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMT-----RLLVASNQIGCLLGKGG 421
ISA + V + +I + + ++ M RLL+ + G ++G G
Sbjct: 90 ---------ISADIETVGEILLKIIPTLEEYQQYNGMDFDCELRLLIHQSLAGSIIGVKG 140
Query: 422 SIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRD 481
+ I E+R+ + I++ + C + VVL+ G+ E V E + T L +
Sbjct: 141 AKIKELRENTKTSIKLFQE----CCPQSTDRVVLVGGKSERVVEC---VKTML--ELISE 191
Query: 482 A-FPSINRPLNPTFLDQVSPFPSFI-------GRRELSPPGMYSNFGPSFHKFD-----A 528
A +P +P F D+ + F GRR + M + +D
Sbjct: 192 APIKGRTQPYDPNFYDETYEYGGFTMFEERGGGRRLMGSFPMRGSRSSGDRGYDRMPSSR 251
Query: 529 VGGPPPPGSFHPHDDHSAF----------------------MHHIHRPG----------- 555
VG P P S +DD S M H HR G
Sbjct: 252 VGRGPLPPSRRDYDDISPRRGPPPPHHSRVVRPSGRSRNMPMGHPHRGGDDRYYDSYRGS 311
Query: 556 -----------------MPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRS 598
M + W + GG + D GP V +P+
Sbjct: 312 DERSNDRRSRPDRYGDNMSGGYDNSSSWDS---YQSGGRGSYSDMGGPVI-TTQVTIPKD 367
Query: 599 LVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFV 656
L I G+ G +KQIR S A I I +P G+ + +I I+GT +Q AQ L+Q V
Sbjct: 368 LAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSV 425
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 38/63 (60%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
I +V P +IGK G+ + QI ++G +I+++E + GS++R++ I + ++ + +
Sbjct: 358 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNA 417
Query: 106 ENL 108
+ L
Sbjct: 418 QYL 420
>gi|67969673|dbj|BAE01185.1| unnamed protein product [Macaca fascicularis]
Length = 324
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 142/333 (42%), Gaps = 50/333 (15%)
Query: 324 HDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAV 383
H + VG +IGK G ++ +++E+G I + E +R+I ++GP + + A +
Sbjct: 2 HGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTNAIFKAFA--MII 57
Query: 384 LRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGK 440
+++ I+ ++ ++ + V RL+V ++Q G L+GKGG I E+R+ +GA +++ G
Sbjct: 58 DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAG- 116
Query: 441 DQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSP 500
D +P + E + I G +++ E + QI + + + P P SP
Sbjct: 117 DMLP---NSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPK--PSSSP 171
Query: 501 FPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPHM 560
F G + + G Y+ P K H M H P
Sbjct: 172 V-IFAGGQAYTIQGQYAIPQPDLTKL-----------------HQLAMQQSHFP------ 207
Query: 561 PDMKPWGPQGLMEVGGPMGFPDFVGPPHRRV-PVVVPRSLVPIIQGEDGACLKQIRQISD 619
G GF + +P L+ I G GA + +IRQ+S
Sbjct: 208 ------------MTHGNTGFSGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSG 255
Query: 620 AKITITDPKPGATETVIIISGTPEQTHAAQSLI 652
A+I I +P G+T+ + I+G+ AQ LI
Sbjct: 256 AQIKIANPVEGSTDRQVTITGSAASISLAQYLI 288
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 109/237 (45%), Gaps = 23/237 (9%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T +S+ LRL+V ++Q G L+GKGGC IK
Sbjct: 46 TNAIFKAFAMIIDKL---EEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 102
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIP 258
+I D LP + + I + K + ++ + L SP +IP
Sbjct: 103 EIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIP 162
Query: 259 GNPTGPSHPL---PDHSVSSQGAPYATGHRDVADIH-LPMPPS-IPKFHESGVLDRPKPS 313
P S P+ + + QG YA D+ +H L M S P H + S
Sbjct: 163 YRPKPSSSPVIFAGGQAYTIQGQ-YAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGLDAS 221
Query: 314 PEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPA 370
+ + L ++ +G +IG+ GA I ++Q +G IK+ V G+ DR + I+G A
Sbjct: 222 AQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSA 278
>gi|224137186|ref|XP_002327061.1| predicted protein [Populus trichocarpa]
gi|222835376|gb|EEE73811.1| predicted protein [Populus trichocarpa]
Length = 357
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 104/206 (50%), Gaps = 24/206 (11%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
+ FR++ ++G VIGK G I+ ++++T IK+ +AV+ E+R+I+IS + +
Sbjct: 51 VIFRIVVPSGKIGKVIGKQGHRIQKIREDTKATIKIADAVARHEERVIIISSKENENGAT 110
Query: 377 SAPQDAVLRV----------------QTRIARAIPDNREQTVMTRLLVASNQIGCLLGKG 420
A ++A+ R+ I + + RLL+A +Q G L+G
Sbjct: 111 DA-ENALQRIAELILNEDDGGSSAGGGVEIGKLVNAGHVAANTIRLLIAGSQAGSLIGMS 169
Query: 421 GSIIAEMRKLSGAYIRILGKDQIPKCAS--ENEEVVLINGEFEAVQEALFQITTRLRHHF 478
G I ++R SGA I +L +Q+P CAS E++ VV I+G+ V +AL +I +LR +
Sbjct: 170 GQNIVKLRNSSGAMITVLAPNQLPLCASAYESDRVVQISGDVPVVLKALEEIGCQLRENP 229
Query: 479 FRDAFPSINRPLNPTFLDQVSPFPSF 504
+ ++P++ PF +
Sbjct: 230 PKQVI-----SISPSYNYSAVPFQQY 250
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 87/386 (22%), Positives = 155/386 (40%), Gaps = 111/386 (28%)
Query: 2 SLPLTPSKRPHDDDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIMFRVLCPVSKIDGVI 61
+LP+T +R D D K +++ ++FR++ P KI VI
Sbjct: 23 ALPVTAKRRRDDFDGGETSAAKRQAR----------------ADVIFRIVVPSGKIGKVI 66
Query: 62 GKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGRE 121
GK G + +I +DT TI++ + V+ +ER+++I + +N+ NG
Sbjct: 67 GKQGHRIQKIREDTKATIKIADAVARHEERVIIISSKENE----------------NGAT 110
Query: 122 EASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQEN 181
+A E ++ + +L + E+ N
Sbjct: 111 DA--------------------------ENALQRIAELILNEDDGGSSAGGGVEIGKLVN 144
Query: 182 T-KSSKFVLRLLVLSTQVGCLLGKGGCVIKQI-------------DKLPTCALA--SDEV 225
+ +RLL+ +Q G L+G G I ++ ++LP CA A SD V
Sbjct: 145 AGHVAANTIRLLIAGSQAGSLIGMSGQNIVKLRNSSGAMITVLAPNQLPLCASAYESDRV 204
Query: 226 VQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHR 285
VQI+G+V V KAL+ I QL +N P+ SI P ++ S
Sbjct: 205 VQISGDVPVVLKALEEIGCQLRENPPKQVISIS----------PSYNYS----------- 243
Query: 286 DVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQE 345
++P F + P+ + + +T ++ + +GG+IG+ G+ I ++ E
Sbjct: 244 -----------AVP-FQQYA----PQAAADYVTMEMMVPETMMGGLIGRSGSNISRIRVE 287
Query: 346 TGCDIKVMEAVSGTEDRLIVISGPAH 371
+G IKV + R I ++G +
Sbjct: 288 SGAVIKVHGGKGAQKHRHIQLAGSSQ 313
>gi|110740181|dbj|BAF01989.1| HEN4 [Arabidopsis thaliana]
Length = 263
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 116/259 (44%), Gaps = 65/259 (25%)
Query: 456 INGEFEAVQEALFQITTRLRHHFFRDAFP-----SINRPLNPTFLDQVSPFPSFIGRRE- 509
I GEF V+EA+F IT+RLR F ++ S + F D+ S P IG +
Sbjct: 2 ITGEFPNVREAIFHITSRLRDSVFSNSMKNSLAKSSSALTTERFYDRQSDNPLSIGSHQS 61
Query: 510 LSPPGMYSNFGPSFHKFD----------------AVGGPPP-------PGSFHP-----H 541
+S P S+ S H+ +VG P P F+P H
Sbjct: 62 VSNPATNSS---SLHRRSEDSFLSGSHSSVNYSRSVGTDPYIRPEDPFPDRFNPSAGYSH 118
Query: 542 D-------DHSAFMHHIHRP-----GMPPHMPDMKPWGPQGLMEVGGPMGFP---DFVGP 586
+ DHS HH+ PP P P+GL + G + +G
Sbjct: 119 NFGRRFTMDHSDNSHHLTEAPSRLWASPP------PAAPRGLSDASGGLSSARAGHVLGS 172
Query: 587 PHRR-------VPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIIS 639
H+ V + VP + + + GE G L+Q+RQIS A++ I +P G ++ +I+IS
Sbjct: 173 GHKSAIVTNTTVEIRVPANAMSFVYGEQGYNLEQLRQISGARVIIHEPPLGTSDRIIVIS 232
Query: 640 GTPEQTHAAQSLIQAFVMS 658
GTP+QT AAQ+L+ AF+++
Sbjct: 233 GTPDQTQAAQNLLHAFILT 251
>gi|224131210|ref|XP_002328482.1| predicted protein [Populus trichocarpa]
gi|222838197|gb|EEE76562.1| predicted protein [Populus trichocarpa]
Length = 346
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 132/326 (40%), Gaps = 68/326 (20%)
Query: 365 VISGPAHPDDRISAPQDAVLRVQTRIARAI-------PDNREQTVMTRLLVASNQIGCLL 417
++S PD + D +LRV RI + P + V TRLLV ++Q G L+
Sbjct: 1 MVSAKEEPDSSLPPAMDGLLRVHKRIIDGLEGDSSHAPPSSGAKVSTRLLVPASQAGSLI 60
Query: 418 GKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHH 477
GK G + +++ S +R+LG + +P + +++ VV + GE V +A+ I ++LR
Sbjct: 61 GKQGGTVKSIQEASACIVRVLGAEDLPVFSLQDDRVVEVLGEAVGVHKAVELIASQLRKF 120
Query: 478 FFRDAFPSINRPLNPTF----------LDQVSPFPSFIGRREL----------------- 510
++R + P F ++Q+ P S+ G + L
Sbjct: 121 L-------VDRSIIPLFEMQMQMANPPMEQMPPHQSWGGPQSLPLNPVGGPGYGQNPQYM 173
Query: 511 SPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQG 570
PP + N+ P PPP PH SA+ G H P
Sbjct: 174 QPPRQHDNYYPPSDM-------PPPMEKQPHQGISAYGRQTPMGG---HASSNAQAAPSM 223
Query: 571 LMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPG 630
+ ++ M +P S + G GA + IR+ S A +TI + + G
Sbjct: 224 ITQITQQM---------------QIPLSYADAVIGTAGASISYIRRASGATVTIQETR-G 267
Query: 631 ATETVII-ISGTPEQTHAAQSLIQAF 655
E + + ISGT Q AQ LIQA
Sbjct: 268 VPEAMTVEISGTASQVQTAQQLIQAI 293
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 108/266 (40%), Gaps = 59/266 (22%)
Query: 160 LLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI------- 212
LL V +R+++ E + + + +K RLLV ++Q G L+GK G +K I
Sbjct: 19 LLRVHKRIIDGL-EGDSSHAPPSSGAKVSTRLLVPASQAGSLIGKQGGTVKSIQEASACI 77
Query: 213 ------DKLPTCALASDEVVQITGEVDTVRKALKLISHQL------------------LD 248
+ LP +L D VV++ GE V KA++LI+ QL +
Sbjct: 78 VRVLGAEDLPVFSLQDDRVVEVLGEAVGVHKAVELIASQLRKFLVDRSIIPLFEMQMQMA 137
Query: 249 NSPRD----HESIPGNPTGPSHPL--PDHSVSSQGAPYATGHRDVADIHLP--MPPSIPK 300
N P + H+S G + P +P+ P + + Q Y R + + P MPP + K
Sbjct: 138 NPPMEQMPPHQSWGGPQSLPLNPVGGPGYGQNPQ---YMQPPRQHDNYYPPSDMPPPMEK 194
Query: 301 FHESGVLDRPKPSP----------------EILTFRLLCHDERVGGVIGKGGAIIRSLKQ 344
G+ + +P +T ++ VIG GA I +++
Sbjct: 195 QPHQGISAYGRQTPMGGHASSNAQAAPSMITQITQQMQIPLSYADAVIGTAGASISYIRR 254
Query: 345 ETGCDIKVMEAVSGTEDRLIVISGPA 370
+G + + E E + ISG A
Sbjct: 255 ASGATVTIQETRGVPEAMTVEISGTA 280
>gi|66472276|ref|NP_001018567.1| poly(rC) binding protein 3 [Danio rerio]
gi|63101380|gb|AAH95089.1| Poly(rC) binding protein 3 [Danio rerio]
gi|182890686|gb|AAI65090.1| Pcbp3 protein [Danio rerio]
Length = 241
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 85/165 (51%), Gaps = 27/165 (16%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R++ I+GP
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT------ 67
Query: 377 SAPQDAVLRVQTRIARAI-----------PDNREQTVMTRLLVASNQIGCLLGKGGSIIA 425
DA+ + IA P + V RL+V ++Q G L+GKGGS I
Sbjct: 68 ----DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 123
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
EMR+ +GA +++ G D +P + E V I+G EA+ + + QI
Sbjct: 124 EMRESTGAQVQVAG-DMLP---NSTERAVTISGTPEAIIQCVKQI 164
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 18/127 (14%)
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQI------------DKLPTCALASDEVVQITGEVDTVR 236
LRL+V ++Q G L+GKGG IK++ D LP +++ V I+G + +
Sbjct: 102 LRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLPN---STERAVTISGTPEAII 158
Query: 237 KALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADI--HLPM 294
+ +K I +L++ P+ +IP P S P+ + P A +++ + H P+
Sbjct: 159 QCVKQICVVMLESPPKG-ATIPYRPKPASTPVIFSGGQVRADPLAASAANLSLLLQHQPL 217
Query: 295 PPSIPKF 301
P S +F
Sbjct: 218 PVSSLRF 224
>gi|410922719|ref|XP_003974830.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Takifugu
rubripes]
Length = 434
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 104/421 (24%), Positives = 162/421 (38%), Gaps = 88/421 (20%)
Query: 303 ESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDR 362
E R + E++ R+L + G VIGKGG I++L+ + + V ++ SG E R
Sbjct: 29 EQKSFKRSRNCDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYKASVSVPDS-SGPE-R 86
Query: 363 LIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMT-----RLLVASNQIGCLL 417
++ IS A V + +I + + ++ + M RLL+ + G ++
Sbjct: 87 ILSIS----------ADIKTVGEILLKIIPTLEEYQQYSGMDFDCELRLLIHQSLAGSII 136
Query: 418 GKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHH 477
G G+ I E+R+ + I++ + C + VVL+ G+ E V E I T L
Sbjct: 137 GVKGAKIKELRENTKTSIKLFQE----CCPQSTDRVVLVGGKMERVVEC---IKTML--E 187
Query: 478 FFRDA-FPSINRPLNPTFLDQVSPFPSFI--------GRREL------------------ 510
DA +P +P F D+ + F GRR +
Sbjct: 188 LIADAPIKGRAQPYDPNFYDETYEYGGFTVMFEERVGGRRPMGGFPSRGNRSSGGDRGFE 247
Query: 511 ---SPPGMYSNFGPSFHKFDAV--GGPPPP-----------------GSFHPHDDHSAFM 548
S G S +D GPPPP G H D +
Sbjct: 248 RMSSSRGGRGPMSSSRRDYDDSPRRGPPPPHSSRVSRGNSRGRNMSIGHSHRGGDDRYYD 307
Query: 549 HHI-------HRPGMPPHMPDMKPWG-----PQGLMEVGGPMGFPDFVGPPHRRVPVVVP 596
+ R G P D G GG + D +G P V +P
Sbjct: 308 SYRGSDERSNDRRGRPDRYSDSMSGGYDNGSSWDNYHSGGRCSYND-IGGPVVTTQVTIP 366
Query: 597 RSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFV 656
+ L I G+ G +KQIR S A I I +P G+ + +I I+GT +Q AQ L+Q+ V
Sbjct: 367 KDLAGSIIGKGGQRIKQIRHDSGAAIKIDEPLEGSEDRIITITGTQDQIQNAQFLLQSSV 426
Query: 657 M 657
+
Sbjct: 427 L 427
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%)
Query: 297 SIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAV 356
S +H G ++T ++ + G +IGKGG I+ ++ ++G IK+ E +
Sbjct: 339 SWDNYHSGGRCSYNDIGGPVVTTQVTIPKDLAGSIIGKGGQRIKQIRHDSGAAIKIDEPL 398
Query: 357 SGTEDRLIVISG 368
G+EDR+I I+G
Sbjct: 399 EGSEDRIITITG 410
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 97/447 (21%), Positives = 169/447 (37%), Gaps = 95/447 (21%)
Query: 103 ETSENLEASIERSENNGREEASVADESDNKKED--------------SVNEGSVLMDGLN 148
E + EAS +E+NG+ A ADE + K S N G+V+ G
Sbjct: 4 EIDQQEEASFSNAESNGKRPAEDADEQKSFKRSRNCDEMVELRILLQSKNAGAVIGKGGK 63
Query: 149 SEKETSKVQKA-------------------LLLVFERMVEVEPETEVADQENTKSSKFVL 189
+ K KA + V E ++++ P E Q + L
Sbjct: 64 NIKALRTDYKASVSVPDSSGPERILSISADIKTVGEILLKIIPTLEEYQQYSGMDFDCEL 123
Query: 190 RLLVLSTQVGCLLGKGGCVIKQIDK---------LPTCALASDEVVQITGEVDTVRKALK 240
RLL+ + G ++G G IK++ + C ++D VV + G+++ V + +K
Sbjct: 124 RLLIHQSLAGSIIGVKGAKIKELRENTKTSIKLFQECCPQSTDRVVLVGGKMERVVECIK 183
Query: 241 LISHQLLDNSPRDHESIPGNPT-------------------GPSHPLPDHSVSSQGAPYA 281
+ +L+ ++P + P +P G P+ S+G +
Sbjct: 184 TM-LELIADAPIKGRAQPYDPNFYDETYEYGGFTVMFEERVGGRRPMG--GFPSRGNRSS 240
Query: 282 TGHRDVADI------HLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERV--GGVIG 333
G R + PM S + +S P P H RV G G
Sbjct: 241 GGDRGFERMSSSRGGRGPMSSSRRDYDDSPRRGPPPP-----------HSSRVSRGNSRG 289
Query: 334 KGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG-PAHPDDRISAPQD---AVLRVQTR 389
+ +I S + G D + ++ G+++R G P D +S D + +
Sbjct: 290 RNMSIGHSHR---GGDDRYYDSYRGSDERSNDRRGRPDRYSDSMSGGYDNGSSWDNYHSG 346
Query: 390 IARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASE 449
+ D V T++ + + G ++GKGG I ++R SGA I+I P SE
Sbjct: 347 GRCSYNDIGGPVVTTQVTIPKDLAGSIIGKGGQRIKQIRHDSGAAIKI----DEPLEGSE 402
Query: 450 NEEVVLINGEFEAVQEALFQITTRLRH 476
+ ++ I G + +Q A F + + + H
Sbjct: 403 -DRIITITGTQDQIQNAQFLLQSSVLH 428
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 37/63 (58%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
+ +V P +IGK G+ + QI D+G I+++E + GS++R++ I + ++ + +
Sbjct: 359 VTTQVTIPKDLAGSIIGKGGQRIKQIRHDSGAAIKIDEPLEGSEDRIITITGTQDQIQNA 418
Query: 106 ENL 108
+ L
Sbjct: 419 QFL 421
>gi|90081810|dbj|BAE90186.1| unnamed protein product [Macaca fascicularis]
Length = 300
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 145/336 (43%), Gaps = 61/336 (18%)
Query: 342 LKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAI------- 394
+++E+G I + E +R++ I+GP DA+ + IA
Sbjct: 1 MREESGARINISEG--NCPERIVTITGPT----------DAIFKAFAMIAYKFEEDIINS 48
Query: 395 ----PDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASEN 450
P + V RL+V ++Q G L+GKGGS I E+R+ +GA +++ G D +P +
Sbjct: 49 MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAG-DMLP---NST 104
Query: 451 EEVVLINGEFEAVQEALFQITTRLRHHFFRDA-FPSINRPLNPTFLDQVSPFPSFIGRRE 509
E V I+G +A+ + + QI + + A P +P + + F G +
Sbjct: 105 ERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPVI--------FAGGQA 156
Query: 510 LSPPGMYSNFGPSFHKFDAVGGP----PPPGSFHPHDDHSAFMHHIHRPG--MPPHMPDM 563
+ G Y+ P K + PP G +P AF PG +P H +
Sbjct: 157 YTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNP-----AF------PGEKLPLHSSEE 205
Query: 564 KPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKIT 623
Q LM G G PP + +P L+ I G G + +IRQ+S A+I
Sbjct: 206 A----QNLM--GQSSGLD--ASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIK 257
Query: 624 ITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
I + G++E I I+GTP AQ LI A + SE
Sbjct: 258 IANATEGSSERQITITGTPANISLAQYLINARLTSE 293
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 112/254 (44%), Gaps = 44/254 (17%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI 212
T + KA ++ + E + +++ T LRL+V ++Q G L+GKGG IK+I
Sbjct: 27 TDAIFKAFAMIAYKFEE-DIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 85
Query: 213 ------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGN 260
D LP +++ V I+G D + + +K I +L++ P+ +IP
Sbjct: 86 RESTGAQVQVAGDMLPN---STERAVTISGTPDAIIQCVKQICVVMLESPPKG-ATIPYR 141
Query: 261 PTGPSHPL---PDHSVSSQGAPYATGHRDVADIH------LPMPP---SIPKF------- 301
P S P+ + + QG YA H D+ +H P PP + P F
Sbjct: 142 PKPASTPVIFAGGQAYTIQGQ-YAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPL 200
Query: 302 HES-------GVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVME 354
H S G SP T L ++ +G +IG+ G I ++Q +G IK+
Sbjct: 201 HSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN 260
Query: 355 AVSGTEDRLIVISG 368
A G+ +R I I+G
Sbjct: 261 ATEGSSERQITITG 274
>gi|149036630|gb|EDL91248.1| similar to Pol(yrC)-binding protein 1 (Alpha-CP1) (hnRNP-E1)
(predicted) [Rattus norvegicus]
Length = 337
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 153/357 (42%), Gaps = 48/357 (13%)
Query: 324 HDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAV 383
H + VG +IGK G ++ +++E+G I + E +R+I ++GP + + A +
Sbjct: 2 HGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTNAIFKAFAM--II 57
Query: 384 LRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGK 440
+++ I ++ ++ + V RL+V + Q G L+GKGG I E+R+ +GA +++ G
Sbjct: 58 DKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAG- 116
Query: 441 DQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSI-NRPLNPTFLDQVS 499
D +P + E + I G ++V E + QI + + + P P + S
Sbjct: 117 DMLP---NSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQP--MPASS 171
Query: 500 PFPSFIGRRELSPPGMYSNF-----GPSFHKFDAVGGPPPPGSFHPHD-----------D 543
P G+ S Y + GP + G + P D
Sbjct: 172 PVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQG----QHTISPLDLAKLNQVARQQS 227
Query: 544 HSAFMH-HIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPI 602
H A MH G+ P++K + + + +P +L+
Sbjct: 228 HFAMMHGGTGFAGIDSSSPEVKGY-------------WASLDASTQTTHELTIPNNLIGC 274
Query: 603 IQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
I G GA + +IRQ+S A+I I +P G++ + I+G+ AQ LI A + SE
Sbjct: 275 IIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLINARLSSE 331
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 115/275 (41%), Gaps = 63/275 (22%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T +S+ LRL+V +TQ G L+GKGGC IK
Sbjct: 46 TNAIFKAFAMIIDKL---EEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIK 102
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALK---LISHQLLDNSPRDH- 254
+I D LP +++ + I G +V + +K L+ + L SP+
Sbjct: 103 EIRESTGAQVQVAGDMLPN---STERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRV 159
Query: 255 ESIPGNPTGPSHPL-----PDHSVSSQGAPYAT--------GHRDVADIHLPMPPSIPKF 301
+IP P S P+ D + G P+AT + H P + K
Sbjct: 160 MTIPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKL 219
Query: 302 HE--------------SGVLDRPKPSPEI------------LTFRLLCHDERVGGVIGKG 335
++ +G SPE+ T L + +G +IG+
Sbjct: 220 NQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQ 279
Query: 336 GAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPA 370
GA I ++Q +G IK+ V G+ R + I+G A
Sbjct: 280 GANINEIRQMSGAQIKIANPVEGSSGRQVTITGSA 314
>gi|116787292|gb|ABK24450.1| unknown [Picea sitchensis]
Length = 357
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 150/354 (42%), Gaps = 56/354 (15%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVM---EAVSGTEDRLIVISGPAHPDDR 375
RLL + G VIGKGGA + + ++G I++ E GT DR+I+++G +
Sbjct: 48 LRLLVSNAAAGSVIGKGGATVSDFQTQSGARIQLSRNHEFFPGTTDRIILVTGSI---NE 104
Query: 376 ISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYI 435
I + +L+ A D E+T RL++ ++ G ++GKGG+ I + S A I
Sbjct: 105 ILTAANLILQKLLSEAEDNNDVDEKTSQVRLVLPNSVCGGIIGKGGATIKSFVEHSQASI 164
Query: 436 RILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRH--HFFRDAFPSINRPLNPT 493
++ +DQI S + +V I G E A+F I ++L ++ + A N PL+ T
Sbjct: 165 KLSSQDQILPGVS--DRLVTITGTLEQQLRAIFLIVSKLAEDPNYAQYA----NAPLSYT 218
Query: 494 FLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAV-GGPPPPGSFHPHDDHSAF-MHHI 551
G S + GG P G P+ S + ++
Sbjct: 219 --------------------------GGSVAGIQGIPGGYTPVGYGLPNYGSSVYGVNAR 252
Query: 552 HRPG-MPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGAC 610
+ G M P + P P+G P V + VP V +I G G
Sbjct: 253 NNKGLMAPLVAMRSPL----------PIGVPLVASGALTSVKMAVPDDRVGVIVGRAGRT 302
Query: 611 LKQIRQISDAKITITDPK---PGATETVIIISGTPEQTHAAQSLIQAFVMSETE 661
+ I+Q+S AKI I+D G + + ISG + A+ +++ + S+ E
Sbjct: 303 ILDIQQVSGAKIKISDRGDFISGTNDRQVTISGPIDAVQHARHMLEQRLSSDLE 356
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 111/249 (44%), Gaps = 48/249 (19%)
Query: 154 SKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQID 213
+++ A L+ ++++ +E D + +RL++ ++ G ++GKGG IK
Sbjct: 103 NEILTAANLILQKLL-----SEAEDNNDVDEKTSQVRLVLPNSVCGGIIGKGGATIKSFV 157
Query: 214 KLPTCAL-----------ASDEVVQITGEVDTVRKALKLISHQLLD--------NSPRDH 254
+ ++ SD +V ITG ++ +A+ LI +L + N+P +
Sbjct: 158 EHSQASIKLSSQDQILPGVSDRLVTITGTLEQQLRAIFLIVSKLAEDPNYAQYANAPLSY 217
Query: 255 --------ESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVA---DIHLPMPPSIPKFHE 303
+ IPG T + LP++ S G +A + P+P +P
Sbjct: 218 TGGSVAGIQGIPGGYTPVGYGLPNYGSSVYGVNARNNKGLMAPLVAMRSPLPIGVP-LVA 276
Query: 304 SGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA---VSGTE 360
SG L + ++ D+RVG ++G+ G I ++Q +G IK+ + +SGT
Sbjct: 277 SGALT---------SVKMAVPDDRVGVIVGRAGRTILDIQQVSGAKIKISDRGDFISGTN 327
Query: 361 DRLIVISGP 369
DR + ISGP
Sbjct: 328 DRQVTISGP 336
>gi|432865686|ref|XP_004070563.1| PREDICTED: poly(rC)-binding protein 4-like [Oryzias latipes]
Length = 467
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 157/366 (42%), Gaps = 52/366 (14%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+ + + E +R+I I+G
Sbjct: 27 LTLRLLMHGKEVGSIIGKKGETVKRIREESSARVNISEG--SCPERIITITGST------ 78
Query: 377 SAPQDAVLRVQTRIARAIPDNREQTVMT-----------RLLVASNQIGCLLGKGGSIIA 425
D+V R T I + ++ V RL++ ++Q G L+GKGG+ I
Sbjct: 79 ----DSVFRAFTMITYKLEEDLTALVANGTISSKPPVTLRLVIPASQCGSLIGKGGAKIK 134
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPS 485
E+R+ +GA I++ G D +P + E V I+G ++V + + I T + + A
Sbjct: 135 EIRESTGAQIQVAG-DLLP---NSTERGVTISGNQDSVIQCVKLICTVILESPPKGA--- 187
Query: 486 INRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAV--GGPPPPGSFH---- 539
P PT SP I ++ S+F P H +V GG ++
Sbjct: 188 -TIPYRPT----PSPAALLIAGNQVFEA---SDFAP--HPLYSVTQGGLDLQQAYALQNQ 237
Query: 540 ---PHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVP 596
PH + + + G+ P P L+ P G +++P
Sbjct: 238 YGIPHSELAKLHQLSVQQGLSPIAQPASTIMPGKLLLHFLPSGMDS---TSQTSQELLIP 294
Query: 597 RSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFV 656
L+ I G G + +IRQ+S A+I I G ++ + I+GTP + AQ LI + +
Sbjct: 295 NDLIGSIIGRQGTKINEIRQVSGAQIKIGSQLDGTSDRHVTITGTPVSINLAQYLITSCL 354
Query: 657 MSETET 662
+ T
Sbjct: 355 ETAKST 360
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 130/305 (42%), Gaps = 75/305 (24%)
Query: 120 REEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQ 179
REE+S N E S E + + G T V +A ++ ++ E + VA+
Sbjct: 53 REESSA---RVNISEGSCPERIITITG-----STDSVFRAFTMITYKLEE-DLTALVANG 103
Query: 180 ENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI------------DKLPTCALASDEVVQ 227
+ LRL++ ++Q G L+GKGG IK+I D LP +++ V
Sbjct: 104 TISSKPPVTLRLVIPASQCGSLIGKGGAKIKEIRESTGAQIQVAGDLLPN---STERGVT 160
Query: 228 ITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPS-----------------HPLPD 270
I+G D+V + +KLI +L++ P+ +IP PT PS P P
Sbjct: 161 ISGNQDSVIQCVKLICTVILESPPKG-ATIPYRPT-PSPAALLIAGNQVFEASDFAPHPL 218
Query: 271 HSVSSQGA----------PYATGHRDVADIH----------LPMPPS-------IPKFHE 303
+SV+ G Y H ++A +H + P S + F
Sbjct: 219 YSVTQGGLDLQQAYALQNQYGIPHSELAKLHQLSVQQGLSPIAQPASTIMPGKLLLHFLP 278
Query: 304 SGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRL 363
SG+ + S E LL ++ +G +IG+ G I ++Q +G IK+ + GT DR
Sbjct: 279 SGMDSTSQTSQE-----LLIPNDLIGSIIGRQGTKINEIRQVSGAQIKIGSQLDGTSDRH 333
Query: 364 IVISG 368
+ I+G
Sbjct: 334 VTITG 338
>gi|444519891|gb|ELV12903.1| Poly(rC)-binding protein 3 [Tupaia chinensis]
Length = 300
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 140/356 (39%), Gaps = 89/356 (25%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H GK GA I E C +R++ I+GP
Sbjct: 14 LTIRLLMH--------GKSGARIN--ISEGNCP-----------ERIVTITGPT------ 46
Query: 377 SAPQDAVLRVQTRIARAI-----------PDNREQTVMTRLLVASNQIGCLLGKGGSIIA 425
DA+ + IA P + V RL+V ++Q G L+GKGGS I
Sbjct: 47 ----DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 102
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDA-FP 484
E+R+ +GA +++ G D +P + E V I+G +A+ + + QI + + A P
Sbjct: 103 EIRESTGAQVQVAG-DMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIP 158
Query: 485 SINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDH 544
+P + + F G + + G Y+ PH D
Sbjct: 159 YRPKPASTPVI--------FAGGQAYTIQGQYA---------------------IPHPDQ 189
Query: 545 SAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDF-VGPPHRRVPVVVPRSLVPII 603
+H + P P + P FP PP + +P L+ I
Sbjct: 190 LTKLHQLAMQQTP--FPPLGQTNP----------AFPGLDASPPASTHELTIPNDLIGCI 237
Query: 604 QGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
G G + +IRQ+S A+I I + G++E I I+GTP AQ LI A + SE
Sbjct: 238 IGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARLTSE 293
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 106/242 (43%), Gaps = 39/242 (16%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI 212
T + KA ++ + E + +++ T LRL+V ++Q G L+GKGG IK+I
Sbjct: 46 TDAIFKAFAMIAYKFEE-DIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 104
Query: 213 ------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGN 260
D LP +++ V I+G D + + +K I +L++ P+ +IP
Sbjct: 105 RESTGAQVQVAGDMLPN---STERAVTISGTPDAIIQCVKQICVVMLESPPKG-ATIPYR 160
Query: 261 PTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKP-------- 312
P S P+ + + G Y +P P + K H+ + P P
Sbjct: 161 PKPASTPV----IFAGGQAYTIQ----GQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPA 212
Query: 313 ------SPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVI 366
SP T L ++ +G +IG+ G I ++Q +G IK+ A G+ +R I I
Sbjct: 213 FPGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITI 272
Query: 367 SG 368
+G
Sbjct: 273 TG 274
>gi|156051102|ref|XP_001591512.1| hypothetical protein SS1G_06958 [Sclerotinia sclerotiorum 1980]
gi|154704736|gb|EDO04475.1| hypothetical protein SS1G_06958 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 371
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 89/388 (22%), Positives = 153/388 (39%), Gaps = 81/388 (20%)
Query: 293 PMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV 352
P+P + ++ ES LT R + + G +IGKGG + L+ ETG V
Sbjct: 37 PLPKTDEEYAES-----------QLTLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGV 85
Query: 353 MEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVM--------- 403
+ V G DR++ ISG D++ R + +A+A+ + Q M
Sbjct: 86 SKVVQGVHDRVLTISGGC----------DSISRAYSIVAKALLEGAPQMGMGGVVSNNGT 135
Query: 404 --TRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFE 461
+LL++ NQ+G ++G+ G I ++ +SG + + K+ +P+ E +V + G E
Sbjct: 136 HPIKLLISHNQMGTIIGRQGLKIKHIQDVSGVRM-VAQKEMLPQST---ERIVEVQGNPE 191
Query: 462 AVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSPFPSF-------IGRRELSPPG 514
+Q+A+++I L + R + NP Q GR S
Sbjct: 192 GIQKAVWEICKCLVDDWARGTGTVL---YNPVVRTQTGGSGGMSQGNLGGTGREYGSSRV 248
Query: 515 MYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEV 574
M + G F + P S++ D A G P H
Sbjct: 249 MRTGNGADFSE-------GAPRSYNRRSDSDAAQR-----GPPTH--------------- 281
Query: 575 GGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITIT-DPKPGATE 633
D G + + +P +V I G G+ + +IR+ S A+I+I P E
Sbjct: 282 -------DENGEELQTQNISIPSDMVGCIIGRAGSKISEIRKTSGARISIAKSPHDETGE 334
Query: 634 TVIIISGTPEQTHAAQSLIQAFVMSETE 661
+ I GT + +A L+ + +E +
Sbjct: 335 RMFTIMGTAKANDSALYLLYENLEAEKQ 362
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 94/210 (44%), Gaps = 24/210 (11%)
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQIDKLPTCAL---------ASDEVVQITGEVDTVRKAL 239
++LL+ Q+G ++G+ G IK I + + +++ +V++ G + ++KA+
Sbjct: 138 IKLLISHNQMGTIIGRQGLKIKHIQDVSGVRMVAQKEMLPQSTERIVEVQGNPEGIQKAV 197
Query: 240 KLISHQLLDNSPRDHESIPGNP-----TGPSHPLPDHSVSSQGAPYATGH----RDVADI 290
I L+D+ R ++ NP TG S + ++ G Y + + AD
Sbjct: 198 WEICKCLVDDWARGTGTVLYNPVVRTQTGGSGGMSQGNLGGTGREYGSSRVMRTGNGADF 257
Query: 291 HLPMPPSIPKFHESGVLDRPKPS-----PEILTFRLLCHDERVGGVIGKGGAIIRSLKQE 345
P S + +S R P+ E+ T + + VG +IG+ G+ I +++
Sbjct: 258 SEGAPRSYNRRSDSDAAQRGPPTHDENGEELQTQNISIPSDMVGCIIGRAGSKISEIRKT 317
Query: 346 TGCDIKVMEA-VSGTEDRLIVISGPAHPDD 374
+G I + ++ T +R+ I G A +D
Sbjct: 318 SGARISIAKSPHDETGERMFTIMGTAKAND 347
>gi|348503027|ref|XP_003439068.1| PREDICTED: poly(rC)-binding protein 4-like [Oreochromis niloticus]
Length = 446
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 155/362 (42%), Gaps = 54/362 (14%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+ + + E +R+I I+G
Sbjct: 16 LTLRLLMHGKEVGSIIGKKGETVKRIREESSARVNISEG--SCPERIITITGST------ 67
Query: 377 SAPQDAVLRVQTRIARAIPDNREQTVMT-----------RLLVASNQIGCLLGKGGSIIA 425
D+V R T I + ++ V RL++ ++Q G L+GKGG+ I
Sbjct: 68 ----DSVFRAFTMITYKLEEDLTALVANGTISSKPPVTLRLVIPASQCGSLIGKGGAKIK 123
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPS 485
E+R+ +GA I++ G D +P + E V I+G ++V + + I T + + A
Sbjct: 124 EIRESTGAQIQVAG-DLLP---NSTERGVTISGNQDSVIQCVKLICTVILESPPKGA--- 176
Query: 486 INRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHS 545
P P+ SP I ++ S F P A GG ++ + +
Sbjct: 177 -TIPYRPS----PSPAALLIAGNQVFEA---SEFAPHPLYSVAQGGLDLQQAYTLQNQYG 228
Query: 546 ---AFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMG--FPDFVGPPHRRVPVVVPRSLV 600
+ + +H+ + QGL + P P +++P L+
Sbjct: 229 IPHSELAKLHQLSV-----------QQGLSPIAQPASAVIPGMDSNSQTSQELLIPNDLI 277
Query: 601 PIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSET 660
I G G + +IRQ+S A+I I G ++ + I+GTP + AQ LI + + +
Sbjct: 278 GSIIGRQGTKINEIRQVSGAQIKIGSQLDGTSDRHVTITGTPVSINLAQYLITSCLETAK 337
Query: 661 ET 662
T
Sbjct: 338 ST 339
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 127/293 (43%), Gaps = 61/293 (20%)
Query: 120 REEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQ 179
REE+S N E S E + + G T V +A ++ ++ E +
Sbjct: 42 REESSA---RVNISEGSCPERIITITG-----STDSVFRAFTMITYKL---EEDLTALVA 90
Query: 180 ENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIKQI------------DKLPTCALASDEV 225
T SSK LRL++ ++Q G L+GKGG IK+I D LP +++
Sbjct: 91 NGTISSKPPVTLRLVIPASQCGSLIGKGGAKIKEIRESTGAQIQVAGDLLPN---STERG 147
Query: 226 VQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPS-----------------HPL 268
V I+G D+V + +KLI +L++ P+ +IP P+ PS P
Sbjct: 148 VTISGNQDSVIQCVKLICTVILESPPKG-ATIPYRPS-PSPAALLIAGNQVFEASEFAPH 205
Query: 269 PDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHE----SGVLDRPKPSPEIL------- 317
P +SV+ G + +P + K H+ G+ +P+ ++
Sbjct: 206 PLYSVAQGGLDLQQAYTLQNQYGIPHS-ELAKLHQLSVQQGLSPIAQPASAVIPGMDSNS 264
Query: 318 --TFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
+ LL ++ +G +IG+ G I ++Q +G IK+ + GT DR + I+G
Sbjct: 265 QTSQELLIPNDLIGSIIGRQGTKINEIRQVSGAQIKIGSQLDGTSDRHVTITG 317
>gi|361066699|gb|AEW07661.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
Length = 139
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 71/116 (61%), Gaps = 7/116 (6%)
Query: 376 ISAPQDAVLRVQTRIARAIPDNREQTVM-------TRLLVASNQIGCLLGKGGSIIAEMR 428
I QDA+LRV + IA+ + + RLLVA++QIG L+GKGG+ I +MR
Sbjct: 16 ICPAQDALLRVHSVIAQESSAKDKDSDADKKGQQNARLLVANSQIGSLIGKGGNNIQKMR 75
Query: 429 KLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFP 484
SGA I+I KD++P CA +E+V+I+G+ AV++AL+ ++ L H ++ P
Sbjct: 76 TESGAQIQIPRKDELPGCAFSFDELVVISGDATAVKKALYAVSAFLYKHLPKEQIP 131
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 51/89 (57%), Gaps = 15/89 (16%)
Query: 190 RLLVLSTQVGCLLGKGGCVIKQI-------------DKLPTCALASDEVVQITGEVDTVR 236
RLLV ++Q+G L+GKGG I+++ D+LP CA + DE+V I+G+ V+
Sbjct: 52 RLLVANSQIGSLIGKGGNNIQKMRTESGAQIQIPRKDELPGCAFSFDELVVISGDATAVK 111
Query: 237 KALKLISHQLLDNSPRDHESIPGNPTGPS 265
KAL +S L + P+ E IP + P+
Sbjct: 112 KALYAVSAFLYKHLPK--EQIPWSLILPA 138
>gi|357140452|ref|XP_003571781.1| PREDICTED: uncharacterized protein LOC100836040 [Brachypodium
distachyon]
Length = 587
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 93/193 (48%), Gaps = 3/193 (1%)
Query: 314 PEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPD 373
P FR+L +VG +IG+ G +R L +ET ++V+ +R+++I PD
Sbjct: 59 PGTTVFRMLISSTKVGAIIGQKGERVRRLCEETKASVRVIGGHFAAAERVVLIFAKEQPD 118
Query: 374 DRISAPQDAVLRVQTRIAR--AIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLS 431
+ I DA+LRV I + + V+TR+L+ S Q L+G+ GS+I + + S
Sbjct: 119 EPIPPAMDALLRVYQNIVNDDGLGMGSDSAVVTRILIPSEQALNLIGEQGSMINLIEEAS 178
Query: 432 GAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLN 491
IR+L + +P A + + +V I G+ V++AL + LR + + + P
Sbjct: 179 QTDIRVLDCN-LPPAALDEDRIVEIWGQPTRVRKALELVARHLRKYLVDRSVIPLFDPHV 237
Query: 492 PTFLDQVSPFPSF 504
P V P +
Sbjct: 238 PMTTSHVDTSPCY 250
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 93/217 (42%), Gaps = 66/217 (30%)
Query: 42 FPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNK 101
+PG +FR+L +K+ +IG+ GE + ++ ++T ++RV + ER+V+I A K
Sbjct: 58 WPGTTVFRMLISSTKVGAIIGQKGERVRRLCEETKASVRVIGGHFAAAERVVLIFA---K 114
Query: 102 KETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALL 161
++ E + +++ ALL
Sbjct: 115 EQPDEPIPPAMD---------------------------------------------ALL 129
Query: 162 LVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDK------- 214
V++ +V + +D S V R+L+ S Q L+G+ G +I I++
Sbjct: 130 RVYQNIVNDDGLGMGSD------SAVVTRILIPSEQALNLIGEQGSMINLIEEASQTDIR 183
Query: 215 -----LPTCALASDEVVQITGEVDTVRKALKLISHQL 246
LP AL D +V+I G+ VRKAL+L++ L
Sbjct: 184 VLDCNLPPAALDEDRIVEIWGQPTRVRKALELVARHL 220
>gi|358255903|dbj|GAA57520.1| heterogeneous nuclear ribonucleoprotein K, partial [Clonorchis
sinensis]
Length = 1085
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 143/361 (39%), Gaps = 50/361 (13%)
Query: 328 VGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQ 387
G +IGKGG I+ +++E +KVM S +R++V+ G +VL +
Sbjct: 2 AGVIIGKGGENIQRIREEY--SVKVMIPDSNGPERVLVLDGDL----------GSVLEIF 49
Query: 388 TRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCA 447
+ +NR++ V RLLV +Q GC++G+GG I E+R+ SG ++ L Q+ C
Sbjct: 50 VENLERMQNNRDEGVDLRLLVHQSQAGCIIGRGGYKIKELREQSG--LQTLKVYQM-LCP 106
Query: 448 SENEEVVLINGEFEAVQEALFQITTRL---------RHHFFRDAFPSINRPLNPTFLDQV 498
+ V+ + G+ + V + L I L +++ RDA SI +
Sbjct: 107 GSTDRVIQLVGDLDKVVDCLQAIAELLEGAPPKGSRQNYDARDADESIAADYGGWGVGNQ 166
Query: 499 SPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPP 558
+ + RR Y GG + +A + P
Sbjct: 167 NAALGLVQRRNNLSTAAYGQNNVLAAGLFGGGGTGVTVAGRTGGQAAAVTQALA--SSLP 224
Query: 559 HMPDMKPWGPQGLMEVGGP--------------------MGFPDFVG----PPHRRVPVV 594
H G GGP G P+ V P V
Sbjct: 225 HASAAAMLAATGGQTAGGPNAGPAGDAAAAAAMMAAGLMRGLPNRVAMNFLTPTTTTQVS 284
Query: 595 VPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQA 654
V ++ I G G + Q+RQ S+A I I+ +PG + +I I+GTPEQ AQ L+Q
Sbjct: 285 VSNKMIGAIMGRAGVRINQVRQESNADIKISRQEPGVEDRIITITGTPEQIQNAQFLLQM 344
Query: 655 F 655
+
Sbjct: 345 W 345
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 48/82 (58%), Gaps = 11/82 (13%)
Query: 180 ENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDK---LPT-------CALASDEVVQIT 229
+N + LRLLV +Q GC++G+GG IK++ + L T C ++D V+Q+
Sbjct: 57 QNNRDEGVDLRLLVHQSQAGCIIGRGGYKIKELREQSGLQTLKVYQMLCPGSTDRVIQLV 116
Query: 230 GEVDTVRKALKLISHQLLDNSP 251
G++D V L+ I+ +LL+ +P
Sbjct: 117 GDLDKVVDCLQAIA-ELLEGAP 137
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 31/51 (60%)
Query: 318 TFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
T ++ ++ +G ++G+ G I ++QE+ DIK+ G EDR+I I+G
Sbjct: 280 TTQVSVSNKMIGAIMGRAGVRINQVRQESNADIKISRQEPGVEDRIITITG 330
>gi|148223740|ref|NP_001083021.1| poly(rC)-binding protein 3 [Danio rerio]
gi|134025331|gb|AAI35089.1| Zgc:162999 protein [Danio rerio]
Length = 350
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 86/165 (52%), Gaps = 27/165 (16%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+ I V E +R++ I+GP
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREESSARINVSEG--NCPERIVTITGPT------ 67
Query: 377 SAPQDAVLRVQTRIARAIPD-------NREQT----VMTRLLVASNQIGCLLGKGGSIIA 425
DA+ + IA + N + T V RL+V ++Q G L+GKGGS I
Sbjct: 68 ----DAIFKAFAMIAYKFEEDIINSMSNSQATSKPPVTLRLVVPASQCGSLIGKGGSKIK 123
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
EMR+ +GA +++ G D +P + E V I+G EA+ + + QI
Sbjct: 124 EMRESTGAQVQVAG-DMLP---NSTERAVTISGTPEAIIQCVKQI 164
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 115/265 (43%), Gaps = 55/265 (20%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI 212
T + KA ++ + E + +++ + T LRL+V ++Q G L+GKGG IK++
Sbjct: 67 TDAIFKAFAMIAYKFEE-DIINSMSNSQATSKPPVTLRLVVPASQCGSLIGKGGSKIKEM 125
Query: 213 ------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGN 260
D LP +++ V I+G + + + +K I +L++ P+ +IP
Sbjct: 126 RESTGAQVQVAGDMLPN---STERAVTISGTPEAIIQCVKQICVVMLESPPKG-ATIPYR 181
Query: 261 P-------------------TGPS----------HPLPDHSVSSQGAPYATGHRDVADIH 291
P T P+ PLP +++ Q YA H D+ +H
Sbjct: 182 PKPATAPVIFSGGQVRADTLTAPATANLSLLLQHQPLPAYTIQGQ---YAIPHPDLTKLH 238
Query: 292 LPMPPSIPKFHESGVLDRPKP----SPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETG 347
P F G P S + T L ++ +G +IG+ G I ++Q +G
Sbjct: 239 QLAMQQTP-FTSLGQTTPAFPGVDASSQASTHELTIPNDLIGCIIGRQGTKINEIRQMSG 297
Query: 348 CDIKVMEAVSGTEDRLIVISG-PAH 371
IK+ A+ G+ DR I I+G PA+
Sbjct: 298 AQIKIANAMEGSSDRQITITGTPAN 322
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%)
Query: 593 VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLI 652
+ +P L+ I G G + +IRQ+S A+I I + G+++ I I+GTP AQ LI
Sbjct: 271 LTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAMEGSSDRQITITGTPANISLAQYLI 330
Query: 653 QA 654
A
Sbjct: 331 NA 332
>gi|27503479|gb|AAH42440.1| Pcbp3 protein [Mus musculus]
Length = 249
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 85/165 (51%), Gaps = 27/165 (16%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R++ I+GP
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT------ 65
Query: 377 SAPQDAVLRVQTRIARAI-----------PDNREQTVMTRLLVASNQIGCLLGKGGSIIA 425
DA+ + IA P + V RL+V ++Q G L+GKGGS I
Sbjct: 66 ----DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 121
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
E+R+ +GA +++ G D +P + E V I+G +A+ + + QI
Sbjct: 122 EIRESTGAQVQVAG-DMLP---NSTERAVTISGTPDAIIQCVKQI 162
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 72/157 (45%), Gaps = 19/157 (12%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI 212
T + KA ++ + E + +++ T LRL+V ++Q G L+GKGG IK+I
Sbjct: 65 TDAIFKAFAMIAYKFEE-DIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 213 ------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGN 260
D LP +++ V I+G D + + +K I +L++ P+ +IP
Sbjct: 124 RESTGAQVQVAGDMLPN---STERAVTISGTPDAIIQCVKQICVVMLESPPKG-ATIPYR 179
Query: 261 PTGPSHPLPDHSVSSQGAPYATGHRDVADI--HLPMP 295
P S P+ + P A +++ + H P+P
Sbjct: 180 PKPASTPVIFAGGQVRADPLAASTANLSLLLQHPPLP 216
>gi|154295229|ref|XP_001548051.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
gi|347829292|emb|CCD44989.1| similar to KH domain RNA-binding protein [Botryotinia fuckeliana]
Length = 371
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 87/385 (22%), Positives = 152/385 (39%), Gaps = 75/385 (19%)
Query: 293 PMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV 352
P+P + ++ ES LT R + + G +IGKGG + L+ ETG V
Sbjct: 37 PLPKTDEEYAES-----------QLTLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGV 85
Query: 353 MEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVM--------- 403
+ V G DR++ ISG D++ R + +A+A+ + Q M
Sbjct: 86 SKVVQGVHDRVLTISGGC----------DSISRAYSIVAKALLEGAPQMGMGGVVSNNGT 135
Query: 404 --TRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFE 461
+LL++ NQ+G ++G+ G I ++ SG + + K+ +P+ E +V + G E
Sbjct: 136 HPIKLLISHNQMGTIIGRQGLKIKHIQDASGVRM-VAQKEMLPQST---ERIVEVQGNPE 191
Query: 462 AVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSPFP----SFIGRRELSPPGMYS 517
+Q+A+++I L + R + P+ T GR S M +
Sbjct: 192 GIQKAIWEICKCLVDDWARGTGTVLYNPMVRTQTGNSGGMSQGNVGGTGREYGSSRVMRT 251
Query: 518 NFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGP 577
G F + P S++ + A G P H
Sbjct: 252 GNGADFSE-------SAPRSYNRRSESDAAQR-----GPPTH------------------ 281
Query: 578 MGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITIT-DPKPGATETVI 636
D G + + +P +V I G G+ + +IR+ S A+I+I P E +
Sbjct: 282 ----DENGEELQTQNISIPADMVGCIIGRAGSKISEIRKTSGARISIAKSPHDETGERMF 337
Query: 637 IISGTPEQTHAAQSLIQAFVMSETE 661
I GT + +A L+ + +E +
Sbjct: 338 TIMGTAKANDSALYLLYENLEAEKQ 362
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 93/210 (44%), Gaps = 24/210 (11%)
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQIDKLPTCAL---------ASDEVVQITGEVDTVRKAL 239
++LL+ Q+G ++G+ G IK I + +++ +V++ G + ++KA+
Sbjct: 138 IKLLISHNQMGTIIGRQGLKIKHIQDASGVRMVAQKEMLPQSTERIVEVQGNPEGIQKAI 197
Query: 240 KLISHQLLDNSPRDHESIPGNP-----TGPSHPLPDHSVSSQGAPYATGH----RDVADI 290
I L+D+ R ++ NP TG S + +V G Y + + AD
Sbjct: 198 WEICKCLVDDWARGTGTVLYNPMVRTQTGNSGGMSQGNVGGTGREYGSSRVMRTGNGADF 257
Query: 291 HLPMPPSIPKFHESGVLDRPKPS-----PEILTFRLLCHDERVGGVIGKGGAIIRSLKQE 345
P S + ES R P+ E+ T + + VG +IG+ G+ I +++
Sbjct: 258 SESAPRSYNRRSESDAAQRGPPTHDENGEELQTQNISIPADMVGCIIGRAGSKISEIRKT 317
Query: 346 TGCDIKVMEA-VSGTEDRLIVISGPAHPDD 374
+G I + ++ T +R+ I G A +D
Sbjct: 318 SGARISIAKSPHDETGERMFTIMGTAKAND 347
>gi|338720838|ref|XP_001488421.3| PREDICTED: poly(rC)-binding protein 3 [Equus caballus]
Length = 393
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 85/165 (51%), Gaps = 27/165 (16%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R++ I+GP
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT------ 97
Query: 377 SAPQDAVLRVQTRIARAI-----------PDNREQTVMTRLLVASNQIGCLLGKGGSIIA 425
DA+ + IA P + V RL+V ++Q G L+GKGGS I
Sbjct: 98 ----DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 153
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
E+R+ +GA +++ G D +P + E V I+G +A+ + + QI
Sbjct: 154 EIRESTGAQVQVAG-DMLP---NSTERAVTISGTPDAIIQCVKQI 194
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 113/277 (40%), Gaps = 67/277 (24%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI 212
T + KA ++ + E + +++ T LRL+V ++Q G L+GKGG IK+I
Sbjct: 97 TDAIFKAFAMIAYKFEE-DIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 155
Query: 213 ------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGN 260
D LP +++ V I+G D + + +K I +L++ P+ +IP
Sbjct: 156 RESTGAQVQVAGDMLPN---STERAVTISGTPDAIIQCVKQICVVMLESPPKG-ATIPYR 211
Query: 261 PTGPSHPL--------------------------PDHSVSSQGAPYATGHRDVADIH--- 291
P S P+ P + + QG YA H ++ +H
Sbjct: 212 PKPASTPVIFAGGQVRADPLAASTANLSLLLQPPPLPAYTIQGQ-YAIPHPELTKLHQLA 270
Query: 292 ---LPMPP---SIPKF-------HES-------GVLDRPKPSPEILTFRLLCHDERVGGV 331
P PP + P F H S G SP T L ++ +G +
Sbjct: 271 MQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCI 330
Query: 332 IGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
IG+ G I ++Q +G IK+ A G+ +R I I+G
Sbjct: 331 IGRQGTKINEIRQMSGAQIKIANATEGSSERQITITG 367
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 40/74 (54%)
Query: 586 PPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQT 645
PP + +P L+ I G G + +IRQ+S A+I I + G++E I I+GTP
Sbjct: 313 PPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANI 372
Query: 646 HAAQSLIQAFVMSE 659
AQ LI A + SE
Sbjct: 373 SLAQYLINARLTSE 386
>gi|402862114|ref|XP_003895414.1| PREDICTED: poly(rC)-binding protein 3-like, partial [Papio anubis]
Length = 327
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 85/165 (51%), Gaps = 27/165 (16%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R++ I+GP
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT------ 97
Query: 377 SAPQDAVLRVQTRIARAI-----------PDNREQTVMTRLLVASNQIGCLLGKGGSIIA 425
DA+ + IA P + V RL+V ++Q G L+GKGGS I
Sbjct: 98 ----DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 153
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
E+R+ +GA +++ G D +P + E V I+G +A+ + + QI
Sbjct: 154 EIRESTGAQVQVAG-DMLP---NSTERAVTISGTPDAIIQCVKQI 194
Score = 42.4 bits (98), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 21/151 (13%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI 212
T + KA ++ + E + +++ T LRL+V ++Q G L+GKGG IK+I
Sbjct: 97 TDAIFKAFAMIAYKFEE-DIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 155
Query: 213 ------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGN 260
D LP +++ V I+G D + + +K I +L++ P+ +IP
Sbjct: 156 RESTGAQVQVAGDMLPN---STERAVTISGTPDAIIQCVKQICVVMLESPPKG-ATIPYR 211
Query: 261 PTGPSHPL---PDHSVSSQGAPYATGHRDVA 288
P S P+ + + QG YA H DV+
Sbjct: 212 PKPASTPVIFAGGQAYTIQGQ-YAIPHPDVS 241
>gi|449274935|gb|EMC83962.1| Poly(rC)-binding protein 4 [Columba livia]
Length = 324
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 151/353 (42%), Gaps = 65/353 (18%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT R+L H + +G +IGK G ++ +++++ I + E +R+ I+G
Sbjct: 23 LTLRMLMHGKEIGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGST------ 74
Query: 377 SAPQDAVLRVQTRIARAIPDNR----------EQTVMTRLLVASNQIGCLLGKGGSIIAE 426
DAV R + IA + ++ V RL++ ++Q G L+GK G+ I E
Sbjct: 75 ----DAVFRAVSMIAFKLEEDLGAGSDGAAVGRSPVTLRLVIPASQCGSLIGKAGAKIRE 130
Query: 427 MRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSI 486
+R+ +GA +++ G D +P + E V ++G + + + QI + +
Sbjct: 131 IRESTGAQVQVAG-DLLP---NSTERAVTVSGVPDTIIHCVRQICAVI-----------L 175
Query: 487 NRPL-NPTFLDQVSPFPSFIGRRELSPPGM---YSNFGPSFHKFDAVGGPPPPGSFHPHD 542
P +PT + +F + PP M ++ P H+ PP P
Sbjct: 176 EVPTESPT-----QAWGAFPHQHGYLPPKMTLSLISWSPCTHQ-----SPPNP------- 218
Query: 543 DHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPI 602
A H H P M +P P L + P G + +VP L+
Sbjct: 219 ---AVGKHWH-PIMTDAYSYWRPTTPL-LTSLSLPPGLD--TSSQNSSQEFLVPNDLIGC 271
Query: 603 IQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAF 655
I G G+ + +IRQ+S A I I + G++E + I+G+P AQ LI A+
Sbjct: 272 IIGRHGSKISEIRQMSGAHIKIGNQTEGSSERHVTITGSPVSITVAQYLITAW 324
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 90/224 (40%), Gaps = 42/224 (18%)
Query: 177 ADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI------------DKLPTCALASDE 224
+D S LRL++ ++Q G L+GK G I++I D LP +++
Sbjct: 96 SDGAAVGRSPVTLRLVIPASQCGSLIGKAGAKIREIRESTGAQVQVAGDLLPN---STER 152
Query: 225 VVQITGEVDTVRKALKLISHQLLD-----------NSPRDHESIP---------GNPTGP 264
V ++G DT+ ++ I +L+ P H +P +P
Sbjct: 153 AVTVSGVPDTIIHCVRQICAVILEVPTESPTQAWGAFPHQHGYLPPKMTLSLISWSPCTH 212
Query: 265 SHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCH 324
P P+ +V P T D P P + LD S + + L
Sbjct: 213 QSP-PNPAVGKHWHPIMT---DAYSYWRPTTPLLTSLSLPPGLDT---SSQNSSQEFLVP 265
Query: 325 DERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
++ +G +IG+ G+ I ++Q +G IK+ G+ +R + I+G
Sbjct: 266 NDLIGCIIGRHGSKISEIRQMSGAHIKIGNQTEGSSERHVTITG 309
>gi|259487459|tpe|CBF86155.1| TPA: KH domain RNA binding protein (AFU_orthologue; AFUA_2G04940)
[Aspergillus nidulans FGSC A4]
Length = 465
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 149/381 (39%), Gaps = 49/381 (12%)
Query: 309 RPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
RP+ + R + + VIGKGG + +++ +G V + G +R++ +SG
Sbjct: 100 RPQDESNWIHIRAVISSQEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSG 159
Query: 369 PAHPDDRISAPQDAVLRVQTRIARAIPDN--------REQTVMTRLLVASNQIGCLLGKG 420
PQDAV + I R + + + +T RLL+ IG ++GKG
Sbjct: 160 ----------PQDAVAKAFGLIIRTLNNEPLDAASTAQSKTYPLRLLIPHILIGSIIGKG 209
Query: 421 GSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFR 480
G+ I E++ SGA R+ D ++E V+L G +AV A + + L
Sbjct: 210 GTRIREIQDASGA--RLNASDACLPLSTERSLVIL--GVADAVHIATYYVAVTLVEQLTE 265
Query: 481 D---------AFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHK--FDAV 529
A S QV P+ + P + P + A
Sbjct: 266 RFGGPAASAYATRSGGPAGAVPGGMQVVPYVPQPAGGQYGHPDTFKRHHPGQARAGAGAY 325
Query: 530 GGPPPPGSFHPHDDHSAFMHH----IHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVG 585
G P G P MH+ G PH P P G + P G P
Sbjct: 326 GVPYLHGQHAPAPVAPQPMHYGAPQTPYAGAGPHQPT-----PYGAPQAAQPRGGPTPAA 380
Query: 586 PPHRRVP-------VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIII 638
P +P + +P +V I G+ GA + +IR +S + I I +P+ + E ++ I
Sbjct: 381 PVGGAMPGQPLTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQENSNERLVTI 440
Query: 639 SGTPEQTHAAQSLIQAFVMSE 659
+GT E A ++ + + SE
Sbjct: 441 TGTQECNQMALYMLYSRLESE 461
Score = 42.4 bits (98), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 53/115 (46%), Gaps = 20/115 (17%)
Query: 264 PSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSP--------- 314
P P P H + Q PYA A H P P P+ + R P+P
Sbjct: 338 PVAPQPMHYGAPQ-TPYAG-----AGPHQPTPYGAPQAAQ----PRGGPTPAAPVGGAMP 387
Query: 315 -EILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
+ LT ++ ++ VG +IGKGGA I ++ +G IK+ E + +RL+ I+G
Sbjct: 388 GQPLTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQENSNERLVTITG 442
>gi|115495373|ref|NP_001069752.1| poly(rC)-binding protein 3 [Bos taurus]
gi|301767382|ref|XP_002919105.1| PREDICTED: poly(rC)-binding protein 3-like [Ailuropoda melanoleuca]
gi|359323604|ref|XP_848733.3| PREDICTED: poly(rC)-binding protein 3 [Canis lupus familiaris]
gi|109659150|gb|AAI18167.1| Poly(rC) binding protein 3 [Bos taurus]
gi|296490840|tpg|DAA32953.1| TPA: poly(rC) binding protein 3 [Bos taurus]
Length = 361
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 85/165 (51%), Gaps = 27/165 (16%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R++ I+GP
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT------ 65
Query: 377 SAPQDAVLRVQTRIARAI-----------PDNREQTVMTRLLVASNQIGCLLGKGGSIIA 425
DA+ + IA P + V RL+V ++Q G L+GKGGS I
Sbjct: 66 ----DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 121
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
E+R+ +GA +++ G D +P + E V I+G +A+ + + QI
Sbjct: 122 EIRESTGAQVQVAG-DMLP---NSTERAVTISGTPDAIIQCVKQI 162
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 100/243 (41%), Gaps = 66/243 (27%)
Query: 187 FVLRLLVLSTQVGCLLGKGGCVIKQI------------DKLPTCALASDEVVQITGEVDT 234
LRL+V ++Q G L+GKGG IK+I D LP +++ V I+G D
Sbjct: 98 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN---STERAVTISGTPDA 154
Query: 235 VRKALKLISHQLLDNSPRDHESIPGNPTGPSHPL-------------------------- 268
+ + +K I +L++ P+ +IP P S P+
Sbjct: 155 IIQCVKQICVVMLESPPKG-ATIPYRPKPASTPVIFAGGQVRADPLAASTANLSLLLQPP 213
Query: 269 PDHSVSSQGAPYATGHRDVADIH------LPMPP---SIPKF-------HES-------G 305
P + + QG YA H D+ +H P PP + P F H S G
Sbjct: 214 PLPAYTIQGQ-YAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMG 272
Query: 306 VLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIV 365
SP T L ++ +G +IG+ G I ++Q +G IK+ A G+ +R I
Sbjct: 273 QSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQIT 332
Query: 366 ISG 368
I+G
Sbjct: 333 ITG 335
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 40/74 (54%)
Query: 586 PPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQT 645
PP + +P L+ I G G + +IRQ+S A+I I + G++E I I+GTP
Sbjct: 281 PPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANI 340
Query: 646 HAAQSLIQAFVMSE 659
AQ LI A + SE
Sbjct: 341 SLAQYLINARLTSE 354
>gi|296213265|ref|XP_002753197.1| PREDICTED: poly(rC)-binding protein 2-like isoform 1 [Callithrix
jacchus]
Length = 342
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 145/341 (42%), Gaps = 55/341 (16%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTNAIFKA 71
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I ++ ++ + V L+V ++Q G L+GKGG I E+R+ +GA
Sbjct: 72 FA--MIIDKLEEDIRSSMTNSTAASRPPVTLSLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPT 493
+++ G D +P + E + I G + +++ + ++ + P P
Sbjct: 130 QVQVAG-DMLP---NSTERAITIAG----IPQSIIECVKQIFVVMLESPPKGVTIPYRPK 181
Query: 494 FLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHR 553
SP F G + + G Y+ P K H + H
Sbjct: 182 --PSSSPV-IFAGGQAYTIQGQYAIPQPDLTKL-----------------HQLAIQQSHF 221
Query: 554 PGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVP--VVVPRSLVPIIQGEDGACL 611
P G GF + + + +P L+ I G GA +
Sbjct: 222 P------------------MTHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKI 263
Query: 612 KQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLI 652
+IRQ+S A+I I +P G+T+ + I+G+ AQ LI
Sbjct: 264 NEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLI 304
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 115/238 (48%), Gaps = 28/238 (11%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T +S+ L L+V ++Q G L+GKGGC IK
Sbjct: 65 TNAIFKAFAMIIDKL---EEDIRSSMTNSTAASRPPVTLSLVVPASQCGSLIGKGGCKIK 121
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIP 258
+I D LP +++ + I G ++ + +K I +L++ P+ +IP
Sbjct: 122 EIRESTGAQVQVAGDMLPN---STERAITIAGIPQSIIECVKQIFVVMLESPPKG-VTIP 177
Query: 259 GNPTGPSHPL---PDHSVSSQGAPYATGHRDVADIH-LPMPPS-IPKFH-ESGVLDRPKP 312
P S P+ + + QG YA D+ +H L + S P H +G
Sbjct: 178 YRPKPSSSPVIFAGGQAYTIQGQ-YAIPQPDLTKLHQLAIQQSHFPMTHGNTGFSAGLDA 236
Query: 313 SPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPA 370
S + + L ++ +G +IG+ GA I ++Q +G IK+ V G+ DR + I+G A
Sbjct: 237 SAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSA 294
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 396 DNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVL 455
D QT L + ++ IGC++G+ G+ I E+R++SGA I+I P S + +V
Sbjct: 235 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN----PVEGSTDRQVT- 289
Query: 456 INGEFEAVQEALFQITTRL 474
I G ++ A + I RL
Sbjct: 290 ITGSAASISLAQYLINVRL 308
>gi|410969851|ref|XP_003991405.1| PREDICTED: poly(rC)-binding protein 3 [Felis catus]
Length = 361
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 85/165 (51%), Gaps = 27/165 (16%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R++ I+GP
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT------ 65
Query: 377 SAPQDAVLRVQTRIARAI-----------PDNREQTVMTRLLVASNQIGCLLGKGGSIIA 425
DA+ + IA P + V RL+V ++Q G L+GKGGS I
Sbjct: 66 ----DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 121
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
E+R+ +GA +++ G D +P + E V I+G +A+ + + QI
Sbjct: 122 EIRESTGAQVQVAG-DMLP---NSTERAVTISGTPDAIIQCVKQI 162
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 100/243 (41%), Gaps = 66/243 (27%)
Query: 187 FVLRLLVLSTQVGCLLGKGGCVIKQI------------DKLPTCALASDEVVQITGEVDT 234
LRL+V ++Q G L+GKGG IK+I D LP +++ V I+G D
Sbjct: 98 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN---STERAVTISGTPDA 154
Query: 235 VRKALKLISHQLLDNSPRDHESIPGNPTGPSHPL-------------------------- 268
+ + +K I +L++ P+ +IP P S P+
Sbjct: 155 IIQCVKQICVVMLESPPKG-ATIPYRPKPASTPVIFAGGQVRADPLAASTANLSLLLQPP 213
Query: 269 PDHSVSSQGAPYATGHRDVADIH------LPMPP---SIPKF-------HES-------G 305
P + + QG YA H D+ +H P PP + P F H S G
Sbjct: 214 PLPAYTIQGQ-YAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMG 272
Query: 306 VLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIV 365
SP T L ++ +G +IG+ G I ++Q +G IK+ A G+ +R I
Sbjct: 273 QSSGLDVSPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQIT 332
Query: 366 ISG 368
I+G
Sbjct: 333 ITG 335
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 41/76 (53%)
Query: 584 VGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPE 643
V PP + +P L+ I G G + +IRQ+S A+I I + G++E I I+GTP
Sbjct: 279 VSPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPA 338
Query: 644 QTHAAQSLIQAFVMSE 659
AQ LI A + SE
Sbjct: 339 NISLAQYLINARLTSE 354
>gi|326500580|dbj|BAK06379.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 471
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 85/376 (22%), Positives = 149/376 (39%), Gaps = 52/376 (13%)
Query: 303 ESGVLDRPKPS-PEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTED 361
E G P P P FRL+ ++VGG+IG+ G +I+ L + T ++V++ G
Sbjct: 79 EEGKKATPWPGFPGASVFRLVVAGDKVGGLIGRRGEVIKRLCEVTRARVRVLDPTDGVSS 138
Query: 362 RLIVISGPAHPDDRISAPQDAVLRVQTRIAR--------AIPDNREQTVMTRLLVASNQI 413
R+++IS ++ DA +R+ + +P + + RLLV Q
Sbjct: 139 RIVLISATEETQAELAPAMDAAVRIFKHVNDIEGINPDFTLPVSGPEICSARLLVPKAQG 198
Query: 414 GCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTR 473
L+GK G+ I M++ +G IRI+ KD++ E +V I G V AL +
Sbjct: 199 RHLIGKQGTTIQLMQESTGTTIRIIDKDELLSNQMVEERIVEIRGASLKVLNALKSVLGL 258
Query: 474 LRH--------HFFRDAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHK 525
LR H F + N + +QV+ + + ++L S+ P+ +
Sbjct: 259 LRRFLVDHSVLHLFERKNEEVAEVQNSSKENQVTNDYALVVNQDLLLSDSRSHHNPNGGR 318
Query: 526 FDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVG 585
+ + G P + D I RP + + ++ M
Sbjct: 319 YLSYGHDPSVCDPYSRD--------IRRPTV------------SLISKITQTM------- 351
Query: 586 PPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQT 645
R+P+ ++ G G + IR +S A + + + E ++ I GT Q
Sbjct: 352 ----RIPLPQAEEII----GVRGQTIAHIRSVSGAMVVLEETGNYLDEVLVSIEGTSSQV 403
Query: 646 HAAQSLIQAFVMSETE 661
A LIQ ++ E
Sbjct: 404 QTAHQLIQEVLLGNGE 419
Score = 46.2 bits (108), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 38 PSKSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEA 97
P FPG +FR++ K+ G+IG+ GE++ ++ + T +RV + G R+V+I A
Sbjct: 86 PWPGFPGASVFRLVVAGDKVGGLIGRRGEVIKRLCEVTRARVRVLDPTDGVSSRIVLISA 145
Query: 98 S-DNKKETSENLEASI 112
+ + + E + ++A++
Sbjct: 146 TEETQAELAPAMDAAV 161
>gi|383158165|gb|AFG61431.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
Length = 139
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 73/122 (59%), Gaps = 19/122 (15%)
Query: 376 ISAPQDAVLRVQTRIARAIPDNREQTVM-------------TRLLVASNQIGCLLGKGGS 422
I QDA+LRV + IA+ E +V RLLVA++QIG L+GKGG+
Sbjct: 16 ICPAQDALLRVHSVIAQ------ESSVKDKDNDADKKGQQNARLLVANSQIGSLIGKGGN 69
Query: 423 IIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDA 482
I +MR SGA I+I KD++P CA +E+V+I+G+ +AV++AL+ ++ L H ++
Sbjct: 70 NIQKMRTESGAQIQIPRKDELPGCAFSFDELVVISGDAKAVKKALYSVSAFLYKHPPKEQ 129
Query: 483 FP 484
P
Sbjct: 130 IP 131
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 51/89 (57%), Gaps = 15/89 (16%)
Query: 190 RLLVLSTQVGCLLGKGGCVIKQI-------------DKLPTCALASDEVVQITGEVDTVR 236
RLLV ++Q+G L+GKGG I+++ D+LP CA + DE+V I+G+ V+
Sbjct: 52 RLLVANSQIGSLIGKGGNNIQKMRTESGAQIQIPRKDELPGCAFSFDELVVISGDAKAVK 111
Query: 237 KALKLISHQLLDNSPRDHESIPGNPTGPS 265
KAL +S L + P+ E IP + P+
Sbjct: 112 KALYSVSAFLYKHPPK--EQIPWSLILPA 138
>gi|403174064|ref|XP_003333074.2| hypothetical protein PGTG_14860, partial [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
gi|375170814|gb|EFP88655.2| hypothetical protein PGTG_14860, partial [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 365
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 97/388 (25%), Positives = 167/388 (43%), Gaps = 54/388 (13%)
Query: 293 PMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV 352
P P +P + +G P + +T R L + G +IGKGG + ++++TG V
Sbjct: 1 PRPNGVP-INSTGAGADPASN---VTLRALVSTKEAGVIIGKGGKTVAEIREQTGTKAGV 56
Query: 353 MEAVSGTEDRLIVISGPAHPDDRISA-PQDAVLR---VQTRIARAIPDNREQTVMTRLLV 408
+AV G DR+ +SG + A +A+L+ T A +P T + R+LV
Sbjct: 57 SKAVQGVHDRIFSVSGGLEGVSKAYAIVAEAILQNPLAATDPALTVPPPTATTTIIRVLV 116
Query: 409 ASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALF 468
+ N +G ++G+ GS I E++ SG + + K+ +P+ E VV + G +A++ A+
Sbjct: 117 SHNLMGSIIGRQGSKIKEIQDTSGVRM-VASKEMLPQS---TERVVEVQGAPDAIRVAIH 172
Query: 469 QITTRLRHHFFRDAFPSINRPLNPTFLDQVSPFPSFI--------------GRRELSPPG 514
+I L + R + +P + +P + GRR +P G
Sbjct: 173 EIGKCLMDDWERAHGTVLYQPGALGAEGPSAAYPGGVLAGGFGGANQGFSNGRRSSAPLG 232
Query: 515 MYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEV 574
+A G P G+ + +S + + PPH +G +
Sbjct: 233 ------------NANGNPLSGGARRASNYNSTNIEN------PPHRSR------EGSLGA 268
Query: 575 GGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITD-PKPGATE 633
P D V R + +P +V I G+ GA + +IR++S +KI+I P + E
Sbjct: 269 SLPPASTDQV---LRTQNISIPSDMVGCIIGKGGAKINEIRRLSGSKISIAKTPHDESGE 325
Query: 634 TVIIISGTPEQTHAAQSLIQAFVMSETE 661
+ I G+PE A L+ + SE E
Sbjct: 326 RMFTIIGSPEANEKALFLLYNQLESEKE 353
Score = 46.6 bits (109), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 89/207 (42%), Gaps = 40/207 (19%)
Query: 188 VLRLLVLSTQVGCLLGKGGCVIKQI-DKLPTCALASDE--------VVQITGEVDTVRKA 238
++R+LV +G ++G+ G IK+I D +AS E VV++ G D +R A
Sbjct: 111 IIRVLVSHNLMGSIIGRQGSKIKEIQDTSGVRMVASKEMLPQSTERVVEVQGAPDAIRVA 170
Query: 239 LKLISHQLLDNSPRDHESI---PG--NPTGPSHPLPDHSV-------------------- 273
+ I L+D+ R H ++ PG GPS P +
Sbjct: 171 IHEIGKCLMDDWERAHGTVLYQPGALGAEGPSAAYPGGVLAGGFGGANQGFSNGRRSSAP 230
Query: 274 --SSQGAPYATGHRDVADIH---LPMPPSIPKFHESGVLDRPKPSPEIL-TFRLLCHDER 327
++ G P + G R ++ + + PP + G P + ++L T + +
Sbjct: 231 LGNANGNPLSGGARRASNYNSTNIENPPHRSREGSLGASLPPASTDQVLRTQNISIPSDM 290
Query: 328 VGGVIGKGGAIIRSLKQETGCDIKVME 354
VG +IGKGGA I +++ +G I + +
Sbjct: 291 VGCIIGKGGAKINEIRRLSGSKISIAK 317
>gi|361066701|gb|AEW07662.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158160|gb|AFG61426.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158161|gb|AFG61427.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158162|gb|AFG61428.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158163|gb|AFG61429.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158164|gb|AFG61430.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158166|gb|AFG61432.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158167|gb|AFG61433.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158168|gb|AFG61434.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158169|gb|AFG61435.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158170|gb|AFG61436.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158171|gb|AFG61437.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158172|gb|AFG61438.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158173|gb|AFG61439.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158174|gb|AFG61440.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158175|gb|AFG61441.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158176|gb|AFG61442.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158177|gb|AFG61443.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
Length = 139
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 73/122 (59%), Gaps = 19/122 (15%)
Query: 376 ISAPQDAVLRVQTRIARAIPDNREQTVM-------------TRLLVASNQIGCLLGKGGS 422
I QDA+LRV + IA+ E +V RLLVA++QIG L+GKGG+
Sbjct: 16 ICPAQDALLRVHSVIAQ------ESSVKDKDNDADKKGQQNARLLVANSQIGSLIGKGGN 69
Query: 423 IIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDA 482
I +MR SGA I+I KD++P CA +E+V+I+G+ +AV++AL+ ++ L H ++
Sbjct: 70 NIQKMRTESGAQIQIPRKDELPGCAFSFDELVVISGDAKAVKKALYSVSAFLYKHPPKEQ 129
Query: 483 FP 484
P
Sbjct: 130 IP 131
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 51/89 (57%), Gaps = 15/89 (16%)
Query: 190 RLLVLSTQVGCLLGKGGCVIKQI-------------DKLPTCALASDEVVQITGEVDTVR 236
RLLV ++Q+G L+GKGG I+++ D+LP CA + DE+V I+G+ V+
Sbjct: 52 RLLVANSQIGSLIGKGGNNIQKMRTESGAQIQIPRKDELPGCAFSFDELVVISGDAKAVK 111
Query: 237 KALKLISHQLLDNSPRDHESIPGNPTGPS 265
KAL +S L + P+ E IP + P+
Sbjct: 112 KALYSVSAFLYKHPPK--EQIPWSLILPA 138
>gi|345320820|ref|XP_001521752.2| PREDICTED: poly(rC)-binding protein 3-like [Ornithorhynchus
anatinus]
Length = 261
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 87/157 (55%), Gaps = 11/157 (7%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R++ I+GP D
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT--DAIF 69
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + + I ++ ++ + V RL+V ++Q G L+GKGGS I E+R+ +GA
Sbjct: 70 KAFAMIAYKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
+++ G D +P + E V I+G +A+ + + QI
Sbjct: 130 QVQVAG-DMLP---NSTERAVTISGTPDAIIQCVKQI 162
Score = 42.4 bits (98), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 66/144 (45%), Gaps = 26/144 (18%)
Query: 181 NTKSSK--FVLRLLVLSTQVGCLLGKGGCVIKQI------------DKLPTCALASDEVV 226
+T +SK LRL+V ++Q G L+GKGG IK+I D LP +++ V
Sbjct: 90 STATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN---STERAV 146
Query: 227 QITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRD 286
I+G D + + +K I +L++ P+ +IP P S P+ + + G Y
Sbjct: 147 TISGTPDAIIQCVKQICVVMLESPPKG-ATIPYRPKPASTPV----IFAGGQAYTIQ--- 198
Query: 287 VADIHLPMPPSIPKFHESGVLDRP 310
+P P + K H+ + P
Sbjct: 199 -GQYAIPHPDQLTKLHQLAMQQTP 221
>gi|47214279|emb|CAG01336.1| unnamed protein product [Tetraodon nigroviridis]
Length = 408
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 105/399 (26%), Positives = 162/399 (40%), Gaps = 85/399 (21%)
Query: 317 LTFRLLCHDERVGGVIGK------------------------GGAIIRSLKQETGCDIKV 352
LT RLL H + VG +IGK G ++ ++++ G +V
Sbjct: 16 LTIRLLMHGKEVGSIIGKVTPANVAAPDRLCSGSDPCSPLFQKGETVKKMREDVGG--RV 73
Query: 353 MEAVSGT----EDRLIV----------ISGPAHPDD--RISAPQDAVLRVQTRIARAI-- 394
+SG + RL++ IS P+ I+ P DA+ + IA
Sbjct: 74 STWLSGRLPLPDARLLLSFQQSGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKFEE 133
Query: 395 ---------PDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPK 445
P + V RL+V ++Q G L+GKGGS I EMR+ +GA +++ G D +P
Sbjct: 134 DIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAG-DMLP- 191
Query: 446 CASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDA-FPSINRPLNPTFLDQVSPFPSF 504
+ E V I+G EA+ + + QI + + A P +P + + F
Sbjct: 192 --NSTERAVTISGTPEAIIQCVKQICVVMLESPPKGATIPYRPKPASTPVI--------F 241
Query: 505 IGRRELSPPGMYSNFGP-SFHKFDAVGGPPPPGSFHPHDDHS-AFMHHIHRPGMPPHMPD 562
G + + G Y+ P K + PP F P + AF PG P P
Sbjct: 242 SGGQAYTIQGQYAIPHPDQLSKLHQLAMQQPP--FTPLGQTTPAF------PGTYP--PT 291
Query: 563 MKPWGPQGLMEV-------GGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIR 615
+P PQ L+ + G + +P L+ I G G + +IR
Sbjct: 292 WRPRWPQLLLSFVPADARSSSSVTAALDAGNQASTHELTIPNDLIGCIIGRQGTKINEIR 351
Query: 616 QISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQA 654
Q+S A+I I + G++E I I+GTP AQ LI A
Sbjct: 352 QMSGAQIKIANAMEGSSERQITITGTPANISLAQYLINA 390
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 114/266 (42%), Gaps = 56/266 (21%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI 212
T + KA ++ + E + +++ T LRL+V ++Q G L+GKGG IK++
Sbjct: 117 TDAIFKAFAMIAYKFEE-DIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEM 175
Query: 213 ------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGN 260
D LP +++ V I+G + + + +K I +L++ P+ +IP
Sbjct: 176 RESTGAQVQVAGDMLPN---STERAVTISGTPEAIIQCVKQICVVMLESPPKG-ATIPYR 231
Query: 261 PTGPSHPL---PDHSVSSQGAPYATGHRD-VADIH---LPMPPSIPKFHESGVL------ 307
P S P+ + + QG YA H D ++ +H + PP P +
Sbjct: 232 PKPASTPVIFSGGQAYTIQGQ-YAIPHPDQLSKLHQLAMQQPPFTPLGQTTPAFPGTYPP 290
Query: 308 -DRPKPSPEILTF------------------------RLLCHDERVGGVIGKGGAIIRSL 342
RP+ +L+F L ++ +G +IG+ G I +
Sbjct: 291 TWRPRWPQLLLSFVPADARSSSSVTAALDAGNQASTHELTIPNDLIGCIIGRQGTKINEI 350
Query: 343 KQETGCDIKVMEAVSGTEDRLIVISG 368
+Q +G IK+ A+ G+ +R I I+G
Sbjct: 351 RQMSGAQIKIANAMEGSSERQITITG 376
>gi|302816563|ref|XP_002989960.1| hypothetical protein SELMODRAFT_428421 [Selaginella moellendorffii]
gi|300142271|gb|EFJ08973.1| hypothetical protein SELMODRAFT_428421 [Selaginella moellendorffii]
Length = 393
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 82/170 (48%), Gaps = 29/170 (17%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISA 378
FRL+ +VG +IG+ G ++ + +ET IK+++ V GT +R++++S P+ IS
Sbjct: 51 FRLIVPLHKVGAIIGRKGEFVKRMCEETRSRIKILDGVPGTLERIVLVSAKEDPEATISP 110
Query: 379 PQDAVLRVQTRIARAIPDNREQT---------VMTRLLVASNQIGCLLGKGGSIIAEMRK 429
D +LRV R+ + E V +RLLV + Q G L+G+
Sbjct: 111 AMDGLLRVHRRVTEGSSGDGEPVEHIILPSGLVQSRLLVTATQAGSLIGR---------- 160
Query: 430 LSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFF 479
++++P CA ++ +V + GE VQ+A+ + + LR
Sbjct: 161 ----------QEELPLCALADDRMVEVQGEILKVQKAMELVVSHLRKFLV 200
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 101/223 (45%), Gaps = 60/223 (26%)
Query: 29 LAGDYSENQPSK----SFPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEET 84
+AG E P + +PG +FR++ P+ K+ +IG+ GE + ++ ++T I++ +
Sbjct: 28 VAGSQEETPPGERKWPGWPGDNVFRLIVPLHKVGAIIGRKGEFVKRMCEETRSRIKILDG 87
Query: 85 VSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLM 144
V G+ ER+V++ A E+ EA+I S M
Sbjct: 88 VPGTLERIVLVSA-------KEDPEATI----------------------------SPAM 112
Query: 145 DGLNSEKETSKVQKALLLVFERMVE-VEPETEVADQENTKSSKFVLRLLVLSTQVGCLLG 203
DG LL V R+ E + E + S RLLV +TQ G L+G
Sbjct: 113 DG-------------LLRVHRRVTEGSSGDGEPVEHIILPSGLVQSRLLVTATQAGSLIG 159
Query: 204 KGGCVIKQIDKLPTCALASDEVVQITGEVDTVRKALKLISHQL 246
+ ++LP CALA D +V++ GE+ V+KA++L+ L
Sbjct: 160 RQ-------EELPLCALADDRMVEVQGEILKVQKAMELVVSHL 195
>gi|348517286|ref|XP_003446165.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like
[Oreochromis niloticus]
Length = 435
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 106/423 (25%), Positives = 162/423 (38%), Gaps = 93/423 (21%)
Query: 303 ESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDR 362
E R + S E++ R+L + G VIGKGG I++L+ + + V ++ SG E R
Sbjct: 29 EQKSFKRSRNSDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYKASVSVPDS-SGPE-R 86
Query: 363 LIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMT-----RLLVASNQIGCLL 417
++ IS A + V + +I + + ++ M RLL+ + G ++
Sbjct: 87 ILSIS----------ADIETVGEILLKIIPTLEEYQQYNGMDFDCELRLLIHQSLAGSII 136
Query: 418 GKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHH 477
G G+ I E+R+ + I++ + C + VVL+ G+ E V E I T L
Sbjct: 137 GVKGAKIKELRENTKTSIKLFQE----CCPQSTDRVVLVGGKTERVVEC---IKTML--E 187
Query: 478 FFRDA-FPSINRPLNPTFLDQVSPFPSFI-------------------GRR----ELSPP 513
+A +P +P F D+ + F G R E S
Sbjct: 188 LISEAPIKGRTQPYDPNFYDETYEYGGFTMMFEERGGGRRPMGGFPMRGSRSSHGERSFD 247
Query: 514 GMYSNFG------PSFHKFDAV--------------------GGPPPPGSFHPHDDHSAF 547
M S+ G PS +D + G P G HPH +
Sbjct: 248 RMPSSRGGRGPMPPSRRDYDEMSPRRGPPPPHPSRVGRGSSRGRNMPMG--HPHRGDDRY 305
Query: 548 MHHIH--------RPGMPPHMPDMKPWG------PQGLMEVGGPMGFPDFVGPPHRRVPV 593
R G P D G + GG + D GP V
Sbjct: 306 YDSYRGSDERSNDRRGRPDRYSDSMSGGGYDNSSSWDSYQSGGRGSYNDMGGPVIT-TQV 364
Query: 594 VVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQ 653
+P+ L I G+ G +KQIR S A I I +P G+ + +I ISGT +Q AQ L+Q
Sbjct: 365 TIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITISGTQDQIQNAQYLLQ 424
Query: 654 AFV 656
V
Sbjct: 425 NSV 427
Score = 40.0 bits (92), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 38/63 (60%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
I +V P +IGK G+ + QI ++G +I+++E + GS++R++ I + ++ + +
Sbjct: 360 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITISGTQDQIQNA 419
Query: 106 ENL 108
+ L
Sbjct: 420 QYL 422
>gi|432934409|ref|XP_004081928.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Oryzias latipes]
Length = 600
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 146/355 (41%), Gaps = 44/355 (12%)
Query: 304 SGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQET--GCDIKVMEAVSGTED 361
SG P+P + R+L + VG +IGK G I+++ ++T DI E E
Sbjct: 175 SGSYSSPRPRQQDFPLRILVPTQFVGAIIGKEGLTIKNVTKQTQSKVDIHRKENAGAAEK 234
Query: 362 RLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGG 421
+ + S P + S+ +L + + A N E + ++L ++ +G L+GK G
Sbjct: 235 PITIHSTP----EGCSSACRMILDIMQKEANETKTNEE--IPLKILAHNSLVGRLIGKEG 288
Query: 422 SIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRD 481
+ ++ + +G I I + C E + + G EA +A +I +L+ + D
Sbjct: 289 RNLKKIEEETGTKITISSLQDLTIC--NPERTITVKGSLEACCKAEVEIMKKLKEAYEND 346
Query: 482 AFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGG---PPPPGSF 538
+IN+ N I L+ G++S+ P G P PP +
Sbjct: 347 -IAAINQQAN------------LIPGLNLNALGIFSSGLPVLPPAAGSRGAVPPMPPAGY 393
Query: 539 HPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRS 598
+P HS+ + ++ G+PP Q P V + +P
Sbjct: 394 NPFLSHSSHLSGLY--GVPPTSAIPHQHSQQ---------------APEQEVVYLFIPTQ 436
Query: 599 LVPIIQGEDGACLKQIRQISDAKITITDPK-PGATETVIIISGTPEQTHAAQSLI 652
V + G+ G +KQ+ + A I I + P TE ++II+GTPE AQ I
Sbjct: 437 AVGALIGKKGQHIKQLAHFAGASIKIAPAESPDVTERMVIITGTPEAQFKAQGRI 491
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 112/481 (23%), Positives = 184/481 (38%), Gaps = 121/481 (25%)
Query: 30 AGDYSENQP-SKSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGS 88
+G YS +P + FP R+L P + +IGK+G + +++ T +
Sbjct: 175 SGSYSSPRPRQQDFP----LRILVPTQFVGAIIGKEGLTIKNVTKQTQSKV--------- 221
Query: 89 DERLVVIEASDNKKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLN 148
I R EN G E + S E + +++D +
Sbjct: 222 ----------------------DIHRKENAGAAEKPITIHST--PEGCSSACRMILDIMQ 257
Query: 149 SEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCV 208
E +K + + L++L ++ VG L+GK G
Sbjct: 258 KEANETKT---------------------------NEEIPLKILAHNSLVGRLIGKEGRN 290
Query: 209 IKQID-----KLPTCALAS------DEVVQITGEVDTVRKALKLISHQLLDNSPRDHESI 257
+K+I+ K+ +L + + + G ++ KA I +L + D +I
Sbjct: 291 LKKIEEETGTKITISSLQDLTICNPERTITVKGSLEACCKAEVEIMKKLKEAYENDIAAI 350
Query: 258 PGNPTG-PSHPLPDHSVSSQGAPY---ATGHRDVADIHLPMPPS------IPKFHESGVL 307
P L + S G P A G R PMPP+ H SG+
Sbjct: 351 NQQANLIPGLNLNALGIFSSGLPVLPPAAGSRGAVP---PMPPAGYNPFLSHSSHLSGLY 407
Query: 308 DRP----------KPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS 357
P + +PE L + VG +IGK G I+ L G IK+ A S
Sbjct: 408 GVPPTSAIPHQHSQQAPEQEVVYLFIPTQAVGALIGKKGQHIKQLAHFAGASIKIAPAES 467
Query: 358 -GTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPD------NREQTVMTRLLVAS 410
+R+++I+G +A + Q RI + + E + T + V S
Sbjct: 468 PDVTERMVIITGTP----------EAQFKAQGRIFGKLKEENFFSAKEEVKLETHIKVPS 517
Query: 411 NQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEV-VLINGEFEAVQEALFQ 469
+ G ++GKGG + E++ L+ A + I+ +DQIP EN+EV V I+G F A Q A +
Sbjct: 518 SAAGRVIGKGGKTVNELQNLTSAEV-IVPRDQIP---DENDEVFVKISGHFFASQTAQRK 573
Query: 470 I 470
I
Sbjct: 574 I 574
>gi|302770987|ref|XP_002968912.1| hypothetical protein SELMODRAFT_409630 [Selaginella moellendorffii]
gi|300163417|gb|EFJ30028.1| hypothetical protein SELMODRAFT_409630 [Selaginella moellendorffii]
Length = 393
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 82/169 (48%), Gaps = 29/169 (17%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISA 378
FRL+ +VG +IG+ G ++ + +ET IK+++ V GT +R++++S P+ IS
Sbjct: 51 FRLIVPLHKVGAIIGRKGEFVKRMCEETRSRIKILDGVPGTLERIVLVSAKEDPEATISP 110
Query: 379 PQDAVLRVQTRIARAIPDNREQT---------VMTRLLVASNQIGCLLGKGGSIIAEMRK 429
D +LRV R+ + E V +RLLV + Q G L+G+
Sbjct: 111 AMDGLLRVHRRVTEGSSGDGEPVEHIILPSGLVQSRLLVTATQAGSLIGR---------- 160
Query: 430 LSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHF 478
++++P CA ++ +V + GE VQ+A+ + + LR
Sbjct: 161 ----------QEELPLCALADDRMVEVQGEILKVQKAMELVVSHLRKFL 199
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 106/241 (43%), Gaps = 60/241 (24%)
Query: 11 PHDDDNHTEPNGKEKSQKLAGDYSENQPSK----SFPGGIMFRVLCPVSKIDGVIGKDGE 66
P D + +P +AG E P + +PG +FR++ P+ K+ +IG+ GE
Sbjct: 10 PVDLLHFEDPASVTLPSTVAGSQEETPPGERKWPGWPGDNVFRLIVPLHKVGAIIGRKGE 69
Query: 67 MMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASVA 126
+ ++ ++T I++ + V G+ ER+V++ A E+ EA+I
Sbjct: 70 FVKRMCEETRSRIKILDGVPGTLERIVLVSA-------KEDPEATI-------------- 108
Query: 127 DESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVE-VEPETEVADQENTKSS 185
S MDG LL V R+ E + E + S
Sbjct: 109 --------------SPAMDG-------------LLRVHRRVTEGSSGDGEPVEHIILPSG 141
Query: 186 KFVLRLLVLSTQVGCLLGKGGCVIKQIDKLPTCALASDEVVQITGEVDTVRKALKLISHQ 245
RLLV +TQ G L+G+ ++LP CALA D +V++ GE+ V+KA++L+
Sbjct: 142 LVQSRLLVTATQAGSLIGRQ-------EELPLCALADDRMVEVQGEILKVQKAMELVVSH 194
Query: 246 L 246
L
Sbjct: 195 L 195
>gi|302916853|ref|XP_003052237.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256733176|gb|EEU46524.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 373
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 145/363 (39%), Gaps = 68/363 (18%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT R + + G +IGKGG + L+ ETG V + V G DR++ I+G
Sbjct: 48 LTLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTITGGC------ 101
Query: 377 SAPQDAVLRVQTRIARAIPDNREQTVM-----------TRLLVASNQIGCLLGKGGSIIA 425
DA+ R +ARA+ + M +LL++ NQ+G ++G+ G I
Sbjct: 102 ----DAISRAYAIVARALLEGAPAMGMGGIVQSNGTHPIKLLISHNQMGTIIGRQGLKIK 157
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPS 485
++ SG + + K+ +P+ E +V + G E +Q A+++I L + R
Sbjct: 158 HIQDASGVRM-VAQKEMLPQS---TERIVEVQGTPEGIQRAVWEICKCLVDDWQRGTGTV 213
Query: 486 INRPL---NPTFLDQV----SPFPSFIGRREL-SPPGMYSNFGPSFHKFDAVGGPPPPGS 537
+ P+ P V + + GR E SP M + G F GS
Sbjct: 214 LYNPVVRTQPASSTSVGSGGAGYSQGSGRSEYGSPRVMRTGNGADFSN----------GS 263
Query: 538 FHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPR 597
P++ S I P P H D G + + +P
Sbjct: 264 SRPYNRRSDSDAAIRGP--PTH----------------------DENGEEIQTQNISIPA 299
Query: 598 SLVPIIQGEDGACLKQIRQISDAKITITD-PKPGATETVIIISGTPEQTHAAQSLIQAFV 656
+V I G G+ + +IR+ S A+I+I P E + I GT + +A L+ +
Sbjct: 300 DMVGCIIGRAGSKISEIRKTSGARISIAKAPHDETGERMFTIMGTAKANESALFLLYENL 359
Query: 657 MSE 659
+E
Sbjct: 360 EAE 362
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 92/214 (42%), Gaps = 28/214 (13%)
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQIDKLPTCAL---------ASDEVVQITGEVDTVRKAL 239
++LL+ Q+G ++G+ G IK I + +++ +V++ G + +++A+
Sbjct: 136 IKLLISHNQMGTIIGRQGLKIKHIQDASGVRMVAQKEMLPQSTERIVEVQGTPEGIQRAV 195
Query: 240 KLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGH-------------RD 286
I L+D+ R ++ NP + P SV S GA Y+ G +
Sbjct: 196 WEICKCLVDDWQRGTGTVLYNPVVRTQPASSTSVGSGGAGYSQGSGRSEYGSPRVMRTGN 255
Query: 287 VADIHLPMPPSIPKFHESGVLDRPKPS-----PEILTFRLLCHDERVGGVIGKGGAIIRS 341
AD + +S R P+ EI T + + VG +IG+ G+ I
Sbjct: 256 GADFSNGSSRPYNRRSDSDAAIRGPPTHDENGEEIQTQNISIPADMVGCIIGRAGSKISE 315
Query: 342 LKQETGCDIKVMEA-VSGTEDRLIVISGPAHPDD 374
+++ +G I + +A T +R+ I G A ++
Sbjct: 316 IRKTSGARISIAKAPHDETGERMFTIMGTAKANE 349
>gi|432110248|gb|ELK34019.1| Poly(rC)-binding protein 3 [Myotis davidii]
Length = 347
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 85/165 (51%), Gaps = 27/165 (16%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R++ I+GP
Sbjct: 56 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT------ 107
Query: 377 SAPQDAVLRVQTRIARAI-----------PDNREQTVMTRLLVASNQIGCLLGKGGSIIA 425
DA+ + IA P + V RL+V ++Q G L+GKGGS I
Sbjct: 108 ----DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 163
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
E+R+ +GA +++ G D +P + E V I+G +A+ + + QI
Sbjct: 164 EIRESTGAQVQVAG-DMLP---NSTERAVTISGTPDAIIQCVKQI 204
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 108/231 (46%), Gaps = 31/231 (13%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI 212
T + KA ++ + E + +++ T LRL+V ++Q G L+GKGG IK+I
Sbjct: 107 TDAIFKAFAMIAYKFEE-DIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 165
Query: 213 ------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGN 260
D LP +++ V I+G D + + +K I +L++ P+ +IP
Sbjct: 166 RESTGAQVQVAGDMLPN---STERAVTISGTPDAIIQCVKQICVVMLESPPKG-ATIPYR 221
Query: 261 PTGPSHPL---PDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEIL 317
P S P+ + + QG YA H DV+ + +P S LD SP
Sbjct: 222 PKPASTPVIFAGGQAYTIQGQ-YAIPHPDVSFHFVCLP-------FSSCLDA---SPPAS 270
Query: 318 TFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
T L ++ +G +IG+ G I ++Q +G IK+ A G+ +R I I+G
Sbjct: 271 THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITG 321
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 40/74 (54%)
Query: 586 PPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQT 645
PP + +P L+ I G G + +IRQ+S A+I I + G++E I I+GTP
Sbjct: 267 PPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANI 326
Query: 646 HAAQSLIQAFVMSE 659
AQ LI A + SE
Sbjct: 327 SLAQYLINARLTSE 340
>gi|320591828|gb|EFX04267.1| kh domain containing RNA-binding protein [Grosmannia clavigera
kw1407]
Length = 476
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 97/389 (24%), Positives = 153/389 (39%), Gaps = 71/389 (18%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
+ R + +IGKGG + ++Q + V + G +R++ +SG D +
Sbjct: 117 IHIRAVISSPEAATIIGKGGENVSKIRQMSNAKCTVSDYQKGAVERILTVSGVV---DAV 173
Query: 377 SAPQDAVLRVQTRIARAIPDN-REQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYI 435
+ ++R P N +T RLL+ IG ++GKGGS I E+++ SGA
Sbjct: 174 AKAFGLIIRTLNNEPLGEPSNAHSKTYPLRLLIPHILIGSIIGKGGSRIKEIQEASGA-- 231
Query: 436 RILGKDQIPKCASENEEVVLINGEFEAVQEALFQI-TTRLRHHFFRDAFPSIN------- 487
R+ D +SE VV+ G +AV A + + +T L R P+ +
Sbjct: 232 RLNASDSCLPMSSERSLVVM--GVADAVHIATYYVGSTLLEQLNERFGGPAASAYAARGG 289
Query: 488 -RPLNPTFLDQVSPF-PSFIG---------------RRELSPPGMYSNFG-PSFHKFDAV 529
QV P+ P G R +L P G + +G P H
Sbjct: 290 GPVGVVPGGMQVVPYLPQPAGGSYGRTENYSRRQDPRAQLPPQGYGAPYGAPIAH----- 344
Query: 530 GGPPP---------------PGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEV 574
GP P P H + H M H G PPH
Sbjct: 345 -GPGPAVPMYGAQAAGAYGAPQLPHQNAAHHGAMPHGPHAGQPPH--------------- 388
Query: 575 GGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATET 634
GP G P G P + + +P +V I G+ G + +IRQ+S + I I +P+ + E
Sbjct: 389 AGPGGHPAMAGAPLTQQ-IYIPNDMVGAIIGKGGQKINEIRQVSGSVIKINEPQDNSNER 447
Query: 635 VIIISGTPEQTHAAQSLIQAFVMSETETT 663
++ I+GT E A ++ + + SE T
Sbjct: 448 LVTITGTEECNRMALYMLYSRLESEKHRT 476
Score = 39.7 bits (91), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 8/71 (11%)
Query: 37 QPSKSFPGG--------IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGS 88
QP + PGG + ++ P + +IGK G+ +++I Q +G I++ E S
Sbjct: 385 QPPHAGPGGHPAMAGAPLTQQIYIPNDMVGAIIGKGGQKINEIRQVSGSVIKINEPQDNS 444
Query: 89 DERLVVIEASD 99
+ERLV I ++
Sbjct: 445 NERLVTITGTE 455
>gi|67523265|ref|XP_659693.1| hypothetical protein AN2089.2 [Aspergillus nidulans FGSC A4]
gi|40745765|gb|EAA64921.1| hypothetical protein AN2089.2 [Aspergillus nidulans FGSC A4]
Length = 745
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 90/374 (24%), Positives = 145/374 (38%), Gaps = 49/374 (13%)
Query: 309 RPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
RP+ + R + + VIGKGG + +++ +G V + G +R++ +SG
Sbjct: 100 RPQDESNWIHIRAVISSQEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSG 159
Query: 369 PAHPDDRISAPQDAVLRVQTRIARAIPDN--------REQTVMTRLLVASNQIGCLLGKG 420
PQDAV + I R + + + +T RLL+ IG ++GKG
Sbjct: 160 ----------PQDAVAKAFGLIIRTLNNEPLDAASTAQSKTYPLRLLIPHILIGSIIGKG 209
Query: 421 GSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFR 480
G+ I E++ SGA R+ D ++E V+L G +AV A + + L
Sbjct: 210 GTRIREIQDASGA--RLNASDACLPLSTERSLVIL--GVADAVHIATYYVAVTLVEQLTE 265
Query: 481 D---------AFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHK--FDAV 529
A S QV P+ + P + P + A
Sbjct: 266 RFGGPAASAYATRSGGPAGAVPGGMQVVPYVPQPAGGQYGHPDTFKRHHPGQARAGAGAY 325
Query: 530 GGPPPPGSFHPHDDHSAFMHH----IHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVG 585
G P G P MH+ G PH P P G + P G P
Sbjct: 326 GVPYLHGQHAPAPVAPQPMHYGAPQTPYAGAGPHQPT-----PYGAPQAAQPRGGPTPAA 380
Query: 586 PPHRRVP-------VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIII 638
P +P + +P +V I G+ GA + +IR +S + I I +P+ + E ++ I
Sbjct: 381 PVGGAMPGQPLTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQENSNERLVTI 440
Query: 639 SGTPEQTHAAQSLI 652
+GT E A ++
Sbjct: 441 TGTQECNQMALYML 454
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 400 QTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGE 459
Q + ++ + ++ +G ++GKGG+ I E+R LSG+ I+I + + NE +V I G
Sbjct: 389 QPLTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQE-----NSNERLVTITGT 443
Query: 460 FEAVQEALFQITTRL 474
E Q AL+ + +RL
Sbjct: 444 QECNQMALYMLYSRL 458
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 52/116 (44%), Gaps = 20/116 (17%)
Query: 263 GPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEI------ 316
P P P H + Q PYA A H P P P+ + R P+P
Sbjct: 337 APVAPQPMHYGAPQ-TPYAG-----AGPHQPTPYGAPQAAQP----RGGPTPAAPVGGAM 386
Query: 317 ----LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
LT ++ ++ VG +IGKGGA I ++ +G IK+ E + +RL+ I+G
Sbjct: 387 PGQPLTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQENSNERLVTITG 442
>gi|320588068|gb|EFX00543.1| kh domain protein RNA-binding protein [Grosmannia clavigera kw1407]
Length = 375
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 146/355 (41%), Gaps = 49/355 (13%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT R + + G +IGKGG + L+ ETG V + V G DR++ I+G
Sbjct: 47 LTLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTITGGC------ 100
Query: 377 SAPQDAVLRVQTRIARAIPDNREQTVM-----------TRLLVASNQIGCLLGKGGSIIA 425
DA+ + +ARA+ + M +LL++ NQ+G ++G+GG I
Sbjct: 101 ----DAISKAYAVVARALLEGVPTMGMGGILQGNGTHPIKLLISHNQMGTVIGRGGLKIK 156
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPS 485
++ +SG + + KD +P+ E +V + G E +Q+A+++I L + R
Sbjct: 157 HIQDVSGVRM-VAQKDILPQS---TERIVEVQGTPEGIQKAVWEICKCLVDDWQRGTGTV 212
Query: 486 INRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHS 545
+ P+ T SP +G ++P Y++ G S + V F
Sbjct: 213 LYNPVVRT--QGTSP---TLGSGSIAPTSNYNSGGRSEYGNSRVTRTGNGADFSNGAS-- 265
Query: 546 AFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQG 605
RP D GP E G + + + +P +V I G
Sbjct: 266 ------SRPNNRRSDSDAAARGPPTHDEQGNEIQTQN----------ISIPADMVGCIIG 309
Query: 606 EDGACLKQIRQISDAKITITD-PKPGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
G+ + +IR+ S A+I+I P E + I G+ + A L+ + +E
Sbjct: 310 RAGSKISEIRKTSGARISIAKAPHDETGERMFTIMGSAKANETALFLLYENLEAE 364
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 93/218 (42%), Gaps = 33/218 (15%)
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQIDKLPTCAL---------ASDEVVQITGEVDTVRKAL 239
++LL+ Q+G ++G+GG IK I + + +++ +V++ G + ++KA+
Sbjct: 135 IKLLISHNQMGTVIGRGGLKIKHIQDVSGVRMVAQKDILPQSTERIVEVQGTPEGIQKAV 194
Query: 240 KLISHQLLDNSPRDHESIPGNPT----GPSHPLPDHSVSSQGAPYATGHRDVADIHLPMP 295
I L+D+ R ++ NP G S L S++ + G + + +
Sbjct: 195 WEICKCLVDDWQRGTGTVLYNPVVRTQGTSPTLGSGSIAPTSNYNSGGRSEYGNSRVTRT 254
Query: 296 PSIPKFHESGVLDRP------------------KPSPEILTFRLLCHDERVGGVIGKGGA 337
+ F +G RP + EI T + + VG +IG+ G+
Sbjct: 255 GNGADF-SNGASSRPNNRRSDSDAAARGPPTHDEQGNEIQTQNISIPADMVGCIIGRAGS 313
Query: 338 IIRSLKQETGCDIKVMEA-VSGTEDRLIVISGPAHPDD 374
I +++ +G I + +A T +R+ I G A ++
Sbjct: 314 KISEIRKTSGARISIAKAPHDETGERMFTIMGSAKANE 351
>gi|400593892|gb|EJP61786.1| KH domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 373
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 91/363 (25%), Positives = 145/363 (39%), Gaps = 66/363 (18%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT R + + G +IGKGG + L+ ETG V + V G DR++ I+G
Sbjct: 46 LTLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTITGGC------ 99
Query: 377 SAPQDAVLRVQTRIARAIPDNREQTVM-----------TRLLVASNQIGCLLGKGGSIIA 425
DA+ R +ARA+ + M +LL++ NQ+G ++G+ G I
Sbjct: 100 ----DAISRAYAIVARALLEGAPAMGMGGILQGNGTHPIKLLISHNQMGTVIGRQGLKIK 155
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPS 485
++ +SG + + K+ +P+ E +V + G E +Q AL++I L + R
Sbjct: 156 HIQDVSGVRM-VAQKEMLPQS---TERIVEVQGTPEGIQRALWEICKCLVDDWQRGTGTV 211
Query: 486 INRPL---NPTFLDQVSPFPSF----IGRRELSPPG-MYSNFGPSFHKFDAVGGPPPPGS 537
+ P+ P SF GR E S P M + G F + GG P
Sbjct: 212 LYNPVVRTQPGTTGGTGSTGSFGATGNGRAEYSSPRVMRTGNGSDFS--NGGGGTRP--- 266
Query: 538 FHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPR 597
F D A G P H D G + + +P
Sbjct: 267 FSRRSDSDAASR-----GPPTH----------------------DENGEEIQTQNISIPA 299
Query: 598 SLVPIIQGEDGACLKQIRQISDAKITITD-PKPGATETVIIISGTPEQTHAAQSLIQAFV 656
+V I G G+ + +IR+ S A+I+I P E + I GT + +A L+ +
Sbjct: 300 DMVGCIIGRAGSKISEIRKTSGARISIAKAPHDETGERMFTIMGTAKANESALFLLYENL 359
Query: 657 MSE 659
+E
Sbjct: 360 EAE 362
>gi|296209450|ref|XP_002751548.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
[Callithrix jacchus]
Length = 579
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 118/479 (24%), Positives = 190/479 (39%), Gaps = 128/479 (26%)
Query: 39 SKSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEAS 98
SK P + R+L P + +IGK+G + I++ T I V
Sbjct: 189 SKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVH---------------- 232
Query: 99 DNKKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQK 158
R EN G E S+ L++ + TS K
Sbjct: 233 ---------------RKENAGAAEKSITI-------------------LSTPEGTSAACK 258
Query: 159 ALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDK---- 214
++L + + E D + T+ + L++L + VG L+GK G +K+I++
Sbjct: 259 SILEIMHK--------EAQDIKFTE--EIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDT 308
Query: 215 ------LPTCALASDE-VVQITGEVDTVRKALKLISHQLLDNSPRDHES-------IPG- 259
L L + E + + G V+T KA + I ++ ++ D S IPG
Sbjct: 309 KITISPLQELTLYNPERTITVKGNVETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGL 368
Query: 260 --NPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEIL 317
N G P + G P A M P P+F +S E
Sbjct: 369 NLNALGLFPPTSGMPPPTSGPPSA------------MTPPYPQFEQS----------ETE 406
Query: 318 TFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRI 376
T L VG +IGK G I+ L + G IK+ A + + R+++I+GP
Sbjct: 407 TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPP------ 460
Query: 377 SAPQDAVLRVQTRIARAIPD------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKL 430
+A + Q RI I + E + + V S G ++GKGG + E++ L
Sbjct: 461 ----EAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNL 516
Query: 431 SGAYIRILGKDQIPKCASENEEVVL-INGEFEAVQEA---LFQITTRLRHHFFRDAFPS 485
S A + ++ +DQ P EN++VV+ I G F A Q A + +I T+++ H + A PS
Sbjct: 517 SSAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVKQHQQQKALPS 571
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 140/358 (39%), Gaps = 69/358 (19%)
Query: 305 GVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV--MEAVSGTEDR 362
G + + KP L RLL + VG +IGK GA IR++ ++T I V E E
Sbjct: 186 GSMSKQKPCD--LPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKS 243
Query: 363 LIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGS 422
+ ++S P + SA ++L + + A+ I E + ++L +N +G L+GK G
Sbjct: 244 ITILSTP----EGTSAACKSILEIMHKEAQDIKFTEE--IPLKILAHNNFVGRLIGKEGR 297
Query: 423 IIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDA 482
+ ++ + + I I ++ E + + G E +A +I ++R + D
Sbjct: 298 NLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGNVETCAKAEEEIMKKIRESYEND- 354
Query: 483 FPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHD 542
S+N L + PG+ N + F G PPP S P
Sbjct: 355 IASMN--LQAHLI-----------------PGLNLN---ALGLFPPTSGMPPPTSGPP-- 390
Query: 543 DHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPI 602
SA PP +P F V + +P V
Sbjct: 391 --SAM--------TPP---------------------YPQFEQSETETVHLFIPALSVGA 419
Query: 603 IQGEDGACLKQIRQISDAKITITDPK-PGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
I G+ G +KQ+ + + A I I + P A ++II+G PE AQ I + E
Sbjct: 420 IIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFKAQGRIYGKIKEE 477
>gi|119193374|ref|XP_001247293.1| hypothetical protein CIMG_01064 [Coccidioides immitis RS]
gi|303312121|ref|XP_003066072.1| KH domain containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|240105734|gb|EER23927.1| KH domain containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|320040053|gb|EFW21987.1| KH domain RNA binding protein [Coccidioides posadasii str.
Silveira]
gi|392863461|gb|EAS35786.2| KH domain RNA binding protein [Coccidioides immitis RS]
Length = 489
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 150/375 (40%), Gaps = 52/375 (13%)
Query: 316 ILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDR 375
+ R + IGKGG + +++ +G V + G +R++ +SGP
Sbjct: 132 FIHIRAVISSAEAATCIGKGGENVSQIRRLSGAKCTVSDYTRGAVERILTVSGP------ 185
Query: 376 ISAPQDAVLRVQTRIARAIPDN--------REQTVMTRLLVASNQIGCLLGKGGSIIAEM 427
QDAV + I R + + + +T RLL+ IG ++GK G I E+
Sbjct: 186 ----QDAVAKAFGLIIRTLNNEPLDSPSTAQSKTYPLRLLIPHILIGSIIGKSGVRIREI 241
Query: 428 RKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRD------ 481
++ SGA R+ D ++E V+L G +AV A + + L
Sbjct: 242 QEHSGA--RLNASDSCLPLSTERSLVIL--GVADAVHIATYYVAATLVEQLTERFGGPAA 297
Query: 482 ---AFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVG-------- 530
A S QV P+ + P + P ++ + G
Sbjct: 298 SAYATRSGGPAGVVPGGMQVVPYVPQPAGGQYGHPDSFKRHHPQANRAMSTGYGVPYMHG 357
Query: 531 -GPPPPGSFHP-HDDHSAFMHHIHRPGMPPHMPDMKPWG----PQGLMEVGGPMGFPDFV 584
GP P G P H + S + G PH P P+G P PMG P
Sbjct: 358 PGPSPHGMQQPIHYNASPRQGYT---GAGPHQP--APYGAPQPPHSHGTPAQPMGAPVAG 412
Query: 585 GPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQ 644
GP +++ +P +V I G+ GA + +IR +S + I I +P+ + E ++ I+GT E
Sbjct: 413 GPLTQQI--FIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQDNSNERLVTITGTQEC 470
Query: 645 THAAQSLIQAFVMSE 659
A ++ + + SE
Sbjct: 471 NQMALYMLYSRLESE 485
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 111/283 (39%), Gaps = 75/283 (26%)
Query: 156 VQKALLLVFERMVEVEPETEVADQENTKSSK-FVLRLLVLSTQVGCLLGKGGCVIKQI-- 212
V KA L+ R + EP D +T SK + LRLL+ +G ++GK G I++I
Sbjct: 189 VAKAFGLII-RTLNNEP----LDSPSTAQSKTYPLRLLIPHILIGSIIGKSGVRIREIQE 243
Query: 213 ------DKLPTCA-LASDEVVQITGEVDTVRKALKLISH--------------------- 244
+ +C L+++ + I G D V A ++
Sbjct: 244 HSGARLNASDSCLPLSTERSLVILGVADAVHIATYYVAATLVEQLTERFGGPAASAYATR 303
Query: 245 ------------QLLDNSPRDHESIPGNPTG--PSHPLPDHSVSS-QGAPYATG------ 283
Q++ P+ G+P HP + ++S+ G PY G
Sbjct: 304 SGGPAGVVPGGMQVVPYVPQPAGGQYGHPDSFKRHHPQANRAMSTGYGVPYMHGPGPSPH 363
Query: 284 ------HRDV--------ADIHLPMPPSIPKF-HESGVLDRPKPSPEI---LTFRLLCHD 325
H + A H P P P+ H G +P +P LT ++ +
Sbjct: 364 GMQQPIHYNASPRQGYTGAGPHQPAPYGAPQPPHSHGTPAQPMGAPVAGGPLTQQIFIPN 423
Query: 326 ERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
+ VG +IGKGGA I ++ +G IK+ E + +RL+ I+G
Sbjct: 424 DMVGAIIGKGGAKINEIRHLSGSVIKINEPQDNSNERLVTITG 466
>gi|148229933|ref|NP_001086212.1| MGC84166 protein [Xenopus laevis]
gi|49256273|gb|AAH74333.1| MGC84166 protein [Xenopus laevis]
Length = 225
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 88/161 (54%), Gaps = 11/161 (6%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R++ I+GP D
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT--DAIF 69
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + + I ++ ++ + V RL+V ++Q G L+GKGGS I E+R+ +GA
Sbjct: 70 KAFAMIAYKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRL 474
+++ G D +P + E V I+G +A+ + + QI +
Sbjct: 130 QVQVAG-DMLP---NSTERAVTISGTPDAIIQCVKQICVVM 166
Score = 45.4 bits (106), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 66/132 (50%), Gaps = 25/132 (18%)
Query: 181 NTKSSK--FVLRLLVLSTQVGCLLGKGGCVIKQI------------DKLPTCALASDEVV 226
+T +SK LRL+V ++Q G L+GKGG IK+I D LP +++ V
Sbjct: 90 STATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN---STERAV 146
Query: 227 QITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPL---PDHSVSSQGAPYATG 283
I+G D + + +K I +L++ P+ +IP P S P+ + S QG YA
Sbjct: 147 TISGTPDAIIQCVKQICVVMLESPPKG-ATIPYRPKPASAPVIFAGGQAYSIQGQ-YAIP 204
Query: 284 HRDVADIHLPMP 295
H DV +P+P
Sbjct: 205 HPDV---WMPVP 213
>gi|241025456|ref|XP_002406183.1| poly(rc) binding protein, putative [Ixodes scapularis]
gi|215491885|gb|EEC01526.1| poly(rc) binding protein, putative [Ixodes scapularis]
Length = 398
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 148/343 (43%), Gaps = 75/343 (21%)
Query: 326 ERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLR 385
+ VG +IGK G I+ ++E+G I + + +R++ ++G +A+L+
Sbjct: 2 QEVGSIIGKKGDNIKKFREESGAKINISDG--SCPERIVTVTGST----------EAILK 49
Query: 386 VQTRIARAIPDNREQT-----------VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAY 434
+ IAR + + V RL+V ++Q G L+GKGGS I E+R+ + A
Sbjct: 50 AFSLIARKFEEVSTSSHSNGSHLPKPPVTLRLIVPASQCGSLIGKGGSKIKEIRE-ARAS 108
Query: 435 IRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDA-FPSINRPLNPT 493
I++ + +P + E V ++G +A+ + ++QI + + A P +P P
Sbjct: 109 IQV-ASEMLP---NSTERAVTVSGTADAITKCIYQICCVMMESPPKGATIPYRPKPAMPP 164
Query: 494 FLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHI-- 551
+ F G + + G Y+ PH D + +H +
Sbjct: 165 VI--------FAGGQAYTVQGQYA---------------------IPHPDLTK-LHQLAL 194
Query: 552 -HRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGAC 610
H P +P H + PQ + + +P L+ I G+ G+
Sbjct: 195 QHAPLLPGH--SVGAINPQAAIAT-----------ASTTTTEMTIPNDLIGCIIGKGGSK 241
Query: 611 LKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQ 653
+ +IRQ+S A I I++ + G+ + + ISGTPE + AQ LI
Sbjct: 242 INEIRQLSGATIKISNSEEGSKDRTVTISGTPEAINLAQYLIN 284
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 112/236 (47%), Gaps = 28/236 (11%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI 212
T + KA L+ + EV + ++ + LRL+V ++Q G L+GKGG IK+I
Sbjct: 44 TEAILKAFSLIARKFEEVSTSSH-SNGSHLPKPPVTLRLIVPASQCGSLIGKGGSKIKEI 102
Query: 213 -----------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNP 261
+ LP +++ V ++G D + K + I ++++ P+ +IP P
Sbjct: 103 REARASIQVASEMLPN---STERAVTVSGTADAITKCIYQICCVMMESPPKG-ATIPYRP 158
Query: 262 TGPSHP----LPDHSVSSQGAPYATGHRDVADIH---LPMPPSIPKFHESGVLD--RPKP 312
P+ P + + QG YA H D+ +H L P +P H G ++
Sbjct: 159 K-PAMPPVIFAGGQAYTVQGQ-YAIPHPDLTKLHQLALQHAPLLPG-HSVGAINPQAAIA 215
Query: 313 SPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
+ T + ++ +G +IGKGG+ I ++Q +G IK+ + G++DR + ISG
Sbjct: 216 TASTTTTEMTIPNDLIGCIIGKGGSKINEIRQLSGATIKISNSEEGSKDRTVTISG 271
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 5/65 (7%)
Query: 413 IGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITT 472
IGC++GKGGS I E+R+LSGA I+I ++ K + V I+G EA+ A + I T
Sbjct: 231 IGCIIGKGGSKINEIRQLSGATIKISNSEEGSK-----DRTVTISGTPEAINLAQYLINT 285
Query: 473 RLRHH 477
+ H
Sbjct: 286 SMELH 290
>gi|148222025|ref|NP_001090223.1| neuro-oncological ventral antigen 2 [Xenopus laevis]
gi|49256115|gb|AAH72959.1| Nova1 protein [Xenopus laevis]
Length = 413
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 102/394 (25%), Positives = 161/394 (40%), Gaps = 77/394 (19%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA---VSGTEDRLIVISGPAHPD 373
L ++L G +IGKGG I L++ETG IK+ ++ GT +R+ ++ G A
Sbjct: 34 LFLKVLIPSYAAGSIIGKGGQTIVQLQRETGATIKLSKSKDFYPGTTERVCLVQGSA--- 90
Query: 374 DRISAPQDAVLRVQTRIA---RAIPD-----------------NREQTVMTRLLVASNQI 413
+A+L V IA R +P N E+ +L+V +
Sbjct: 91 -------EALLSVHNFIAEKVREVPQGAPKNDLGVLLPPQSTINAERAKQAKLIVPNTTA 143
Query: 414 GCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI--- 470
G ++GKGG+ + + + SGA++++ Q P ++ +E VV ++GE VQ+A+ I
Sbjct: 144 GLIIGKGGATVRNIMEESGAWVQL---SQKPAGSNLHERVVTVSGEPSQVQKAIHSIIHK 200
Query: 471 --------TTRLRHHFFRDAFPSINRPLNPTFLDQ--------VSPF------PSFIGRR 508
TT L + P N NPT ++PF P I
Sbjct: 201 SREDPPQGTTHLNISYINTQGPVANS--NPTGSPYAGGAAEPVLTPFQPAPPAPPAISGG 258
Query: 509 ELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGP 568
+L N S+ +G P G HP + + G P + G
Sbjct: 259 DLLAISAALNTLASYGYSTGMGYNPLVGGVHPAAVN-LLASYTGEAG-----PSLGLGGG 312
Query: 569 QGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPK 628
L+E MG G + + VP +LV I G+ G L + ++++ A+I I+
Sbjct: 313 GILLE---KMGAESVTG--KETLEMAVPETLVGAILGKGGKTLVEYQELTGARIQISKKG 367
Query: 629 ---PGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
PG + I+G P T AAQ LI V E
Sbjct: 368 EFVPGTRSRKVTITGPPGATQAAQYLIGQRVAYE 401
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 102/253 (40%), Gaps = 61/253 (24%)
Query: 44 GGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEET---VSGSDERLVVIEASDN 100
G + +VL P +IGK G+ + Q+ ++TG TI++ ++ G+ ER+ +++ S
Sbjct: 32 GELFLKVLIPSYAAGSIIGKGGQTIVQLQRETGATIKLSKSKDFYPGTTERVCLVQGSAE 91
Query: 101 KKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKAL 160
+ N A R G + N+ VL+
Sbjct: 92 ALLSVHNFIAEKVREVPQGAPK---------------NDLGVLL---------------- 120
Query: 161 LLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIK---------- 210
P + E K +K L+V +T G ++GKGG ++
Sbjct: 121 -----------PPQSTINAERAKQAK----LIVPNTTAGLIIGKGGATVRNIMEESGAWV 165
Query: 211 QIDKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPD 270
Q+ + P + + VV ++GE V+KA+ I H+ ++ P+ + + P+ +
Sbjct: 166 QLSQKPAGSNLHERVVTVSGEPSQVQKAIHSIIHKSREDPPQGTTHLNISYINTQGPVAN 225
Query: 271 HSVSSQGAPYATG 283
+ + G+PYA G
Sbjct: 226 SNPT--GSPYAGG 236
>gi|46125203|ref|XP_387155.1| hypothetical protein FG06979.1 [Gibberella zeae PH-1]
Length = 372
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 143/356 (40%), Gaps = 54/356 (15%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT R + + G +IGKGG + L+ ETG V + V G DR++ I+G
Sbjct: 47 LTLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTITGGC------ 100
Query: 377 SAPQDAVLRVQTRIARAIPDNREQTVM-----------TRLLVASNQIGCLLGKGGSIIA 425
DA+ R +ARA+ + M +LL++ NQ+G ++G+ G I
Sbjct: 101 ----DAISRAYAIVARALLEGAPAMGMGGVVQSNGTHPIKLLISHNQMGTIIGRQGLKIK 156
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPS 485
++ SG + + K+ +P+ E +V + G E +Q A+++I L + R
Sbjct: 157 HIQDASGVRM-VAQKEMLPQS---TERIVEVQGTPEGIQRAIWEICKCLVDDWQRGTGTV 212
Query: 486 INRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPP-PPGSFHPHDDH 544
+ NP Q S + G + S++G S G GS P++
Sbjct: 213 L---YNPVVRTQPSSGGNTSGGAGFNQGSGRSDYGGSPRVMRTGNGADFSNGSSRPYNRR 269
Query: 545 SAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQ 604
S + P P H D G + + +P +V I
Sbjct: 270 SDSDAALRGP--PTH----------------------DENGEEIQTQNISIPADMVGCII 305
Query: 605 GEDGACLKQIRQISDAKITITD-PKPGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
G G+ + +IR+ S A+I+I P E + I GT + +A L+ + +E
Sbjct: 306 GRAGSKISEIRKTSGARISIAKAPHDETGERMFTIMGTAKANESALFLLYENLEAE 361
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 47/225 (20%), Positives = 92/225 (40%), Gaps = 50/225 (22%)
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQIDKLPTCAL---------ASDEVVQITGEVDTVRKAL 239
++LL+ Q+G ++G+ G IK I + +++ +V++ G + +++A+
Sbjct: 135 IKLLISHNQMGTIIGRQGLKIKHIQDASGVRMVAQKEMLPQSTERIVEVQGTPEGIQRAI 194
Query: 240 KLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVS-----------------------SQ 276
I L+D+ R ++ NP + P + S
Sbjct: 195 WEICKCLVDDWQRGTGTVLYNPVVRTQPSSGGNTSGGAGFNQGSGRSDYGGSPRVMRTGN 254
Query: 277 GAPYATG------HRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGG 330
GA ++ G R +D L PP+ E+G EI T + + VG
Sbjct: 255 GADFSNGSSRPYNRRSDSDAALRGPPT---HDENG--------EEIQTQNISIPADMVGC 303
Query: 331 VIGKGGAIIRSLKQETGCDIKVMEA-VSGTEDRLIVISGPAHPDD 374
+IG+ G+ I +++ +G I + +A T +R+ I G A ++
Sbjct: 304 IIGRAGSKISEIRKTSGARISIAKAPHDETGERMFTIMGTAKANE 348
>gi|18071423|gb|AAL58282.1|AC068923_24 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 952
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 66/98 (67%), Gaps = 3/98 (3%)
Query: 357 SGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCL 416
+ +E+RLIV+S PDD +S +A++ + ++ A + +N + T TRL+V SN++GC+
Sbjct: 561 NASEERLIVVSSQEIPDDPVSPTIEALILLHSK-ASTLAENHQLT--TRLVVPSNKVGCI 617
Query: 417 LGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVV 454
LG+GG +I EMR+ +GA IR+ K PK S +EE+V
Sbjct: 618 LGEGGKVITEMRRRTGAEIRVYSKADKPKYLSFDEELV 655
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 31/46 (67%)
Query: 611 LKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFV 656
L + IS A++ + + PG++E+++ I G P+Q AAQSL+Q F+
Sbjct: 888 LSLVLVISGARVKLHEAHPGSSESIVEIQGIPDQVKAAQSLLQGFI 933
>gi|405977635|gb|EKC42074.1| Poly(rC)-binding protein 3 [Crassostrea gigas]
Length = 439
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 155/363 (42%), Gaps = 66/363 (18%)
Query: 316 ILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDR 375
+LT R++ + VG +IGK G I+ ++++G I + + +R++ ++G
Sbjct: 11 LLTVRMIMQGKEVGSIIGKKGDNIKKFREDSGAKINISDG--SCPERIVTVTGTT----- 63
Query: 376 ISAPQDAVLRVQTRIARAIPDNREQT-------VMTRLLVASNQIGCLLGKGGSIIAEMR 428
+ + + T I + ++ + T V RL+V ++Q G L+GKGGS I E+R
Sbjct: 64 -----ECIHKAFTMICKKFEEDLQNTPTVPKPPVTLRLVVPASQCGSLIGKGGSKIKEIR 118
Query: 429 KLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSIN- 487
+ +GA I++ + +P + E V ++G +A+ + I + + + A
Sbjct: 119 ETTGASIQV-ASEMLP---NSTERAVTVSGTADAITLCIQNICSIMLESPPKGATIQYRP 174
Query: 488 RPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAF 547
+P+ P + F G + + PG G + + +G P
Sbjct: 175 KPVVPPVI--------FAGGQAYTVPGQMQ--GVQASEKERLGIP------------KME 212
Query: 548 MHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVV------------- 594
+ +H+ + +P + PQ L++ P G P R V
Sbjct: 213 LSKLHQLSLGQPIPIIPCTSPQ-LIQATMP-GLPHMAAAYPRATNTVPQALPAQPQQQQT 270
Query: 595 -----VPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQ 649
+P L+ I G G + +IRQ+S A I I++ + GA + + I+GTPE AQ
Sbjct: 271 TTEMAIPNDLIGCIIGRGGQKINEIRQMSGAMIKISNAEEGAPDRKVTITGTPETIGLAQ 330
Query: 650 SLI 652
LI
Sbjct: 331 YLI 333
Score = 42.4 bits (98), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 128/316 (40%), Gaps = 80/316 (25%)
Query: 119 GREEASV-ADESDNKK---EDS-----VNEGSVLMDGLNSEKETSKVQKALLLVFERMVE 169
G+E S+ + DN K EDS +++GS + T + KA ++ ++ E
Sbjct: 20 GKEVGSIIGKKGDNIKKFREDSGAKINISDGSCPERIVTVTGTTECIHKAFTMICKKFEE 79
Query: 170 VEPETEVADQENTKSSK---FVLRLLVLSTQVGCLLGKGGCVIKQIDKLPTCAL------ 220
D +NT + LRL+V ++Q G L+GKGG IK+I + ++
Sbjct: 80 --------DLQNTPTVPKPPVTLRLVVPASQCGSLIGKGGSKIKEIRETTGASIQVASEM 131
Query: 221 ---ASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQG 277
+++ V ++G D + ++ I +L+ SP +I P P+ + + G
Sbjct: 132 LPNSTERAVTVSGTADAITLCIQNICSIMLE-SPPKGATIQYRP----KPVVPPVIFAGG 186
Query: 278 APYAT-----GHRDVADIHLPMPP-SIPKFHESGVLDRPKP-----SPEILTFRL--LCH 324
Y G + L +P + K H+ L +P P SP+++ + L H
Sbjct: 187 QAYTVPGQMQGVQASEKERLGIPKMELSKLHQLS-LGQPIPIIPCTSPQLIQATMPGLPH 245
Query: 325 --------------------------------DERVGGVIGKGGAIIRSLKQETGCDIKV 352
++ +G +IG+GG I ++Q +G IK+
Sbjct: 246 MAAAYPRATNTVPQALPAQPQQQQTTTEMAIPNDLIGCIIGRGGQKINEIRQMSGAMIKI 305
Query: 353 MEAVSGTEDRLIVISG 368
A G DR + I+G
Sbjct: 306 SNAEEGAPDRKVTITG 321
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 406 LLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQE 465
+ + ++ IGC++G+GG I E+R++SGA I+I ++ + V I G E +
Sbjct: 274 MAIPNDLIGCIIGRGGQKINEIRQMSGAMIKISNAEE-----GAPDRKVTITGTPETIGL 328
Query: 466 ALFQITTRLRHH 477
A + I T + H
Sbjct: 329 AQYLINTSMELH 340
Score = 39.7 bits (91), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 310 PKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVM-EAVSGTEDRLIVISG 368
PKP +T RL+ + G +IGKGG+ I+ +++ TG I+V E + + +R + +SG
Sbjct: 88 PKPP---VTLRLVVPASQCGSLIGKGGSKIKEIRETTGASIQVASEMLPNSTERAVTVSG 144
Query: 369 PA 370
A
Sbjct: 145 TA 146
>gi|380024759|ref|XP_003696159.1| PREDICTED: poly(rC)-binding protein 3-like [Apis florea]
Length = 560
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 85/167 (50%), Gaps = 29/167 (17%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RL+ + VG +IGK G I++ ++E+G I + + +R++ ++GP
Sbjct: 18 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTVTGPT------ 69
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT-------------VMTRLLVASNQIGCLLGKGGSI 423
+++ + T I + + Q + RL+V ++Q G L+GKGGS
Sbjct: 70 ----NSIFKAFTLICKKFEEWCSQFHDIQGSGGVPRPPITLRLIVPASQCGSLIGKGGSK 125
Query: 424 IAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
I E+R+++GA I++ D +P + E V I+G EA+ + ++ I
Sbjct: 126 IKEIREVTGASIQV-ASDMLP---NSTERAVTISGTSEAITQCIYHI 168
Score = 46.2 bits (108), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Query: 392 RAIPDNREQTVMTR----LLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCA 447
R NR+Q + V + IGC++GKGG+ IAE+R++SGA IRI ++ +
Sbjct: 352 RTSNTNRQQPAANNQTHEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REG 409
Query: 448 SENEEVVLINGEFEAVQEALFQIT 471
+ + I G +AV A + I+
Sbjct: 410 GATDRTITITGNPDAVSLAQYLIS 433
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 593 VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKP---GATETVIIISGTPEQTHAAQ 649
+ VP L+ I G+ G + +IRQIS A I I++ + GAT+ I I+G P+ AQ
Sbjct: 370 MTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVSLAQ 429
Query: 650 SLIQAFV 656
LI V
Sbjct: 430 YLISMSV 436
Score = 39.7 bits (91), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 69/152 (45%), Gaps = 15/152 (9%)
Query: 153 TSKVQKALLLVFERMVEVEPET-EVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQ 211
T+ + KA L+ ++ E + ++ LRL+V ++Q G L+GKGG IK+
Sbjct: 69 TNSIFKAFTLICKKFEEWCSQFHDIQGSGGVPRPPITLRLIVPASQCGSLIGKGGSKIKE 128
Query: 212 IDKLPTCAL---------ASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPT 262
I ++ ++ +++ V I+G + + + + I +L++ P+ +IP P
Sbjct: 129 IREVTGASIQVASDMLPNSTERAVTISGTSEAITQCIYHICCVMLESPPKG-ATIPYRPK 187
Query: 263 ----GPSHPLPDHSVSSQGAPYATGHRDVADI 290
GP + + QG H DV+ +
Sbjct: 188 PQVGGPVILAGGQAYTIQGNYAVPAHSDVSTV 219
>gi|353243541|emb|CCA75070.1| related to poly(rC)-binding protein 3 [Piriformospora indica DSM
11827]
Length = 631
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 147/360 (40%), Gaps = 22/360 (6%)
Query: 310 PKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGP 369
P + + LT R L + G +IGK G + L+++TG V + V+G +R++ ++G
Sbjct: 271 PSAAQDTLTLRALVGTKDAGIIIGKAGKNVADLREQTGVKAGVSKVVAGVHERVLSVTGS 330
Query: 370 AHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRK 429
+ L + + P N + RLL++ N +G ++G+ G I ++
Sbjct: 331 VQGVAKAYTTILQQLVTSSPSSTTAPANPSNHTIIRLLISHNLMGTIIGRNGLKIKNIQD 390
Query: 430 LSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRP 489
SGA + + KD +P+ E +V + G EA+ +A+ +I L + R + +P
Sbjct: 391 SSGARM-VAQKDMLPQ---STERIVEVQGSPEAIGKAIEEIGKCLLEDWERGLGTVLYQP 446
Query: 490 --LNPTFLDQVSPFPSFIGRRELSPPGMYSN-----FGPSFHKFDAVGGPPPPGSFHPHD 542
P + + RR G Y+N S + V P GS +
Sbjct: 447 GAGGPDAITNI--LAGSASRR-----GSYANPSVNALTESARRLSLVDFTPSVGSANSRS 499
Query: 543 DHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPI 602
+ + P ++ Q P P G P R + +P +V
Sbjct: 500 TNGSSAASSGAT-SSVVAPSVQSQSSQATAIP--PSNAPPGSGQPLRTQSISIPSDMVGC 556
Query: 603 IQGEDGACLKQIRQISDAKITITD-PKPGATETVIIISGTPEQTHAAQSLIQAFVMSETE 661
I G G + +IR++S +KI+I P E + I GTPE A L+ + SE E
Sbjct: 557 IIGRAGTKITEIRRLSGSKISIAKGPHDETGERMFTIVGTPESNEKALYLLYNQLESEKE 616
>gi|218184819|gb|EEC67246.1| hypothetical protein OsI_34185 [Oryza sativa Indica Group]
Length = 470
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 75/120 (62%), Gaps = 12/120 (10%)
Query: 357 SGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCL 416
+ +E+RLIV+S PDD +S +A++ + ++++ + +N + T TRL+V SN++GC+
Sbjct: 220 NASEERLIVVSSQEIPDDPVSPTIEALILLHSKVS-TLAENHQLT--TRLVVPSNKVGCI 276
Query: 417 LGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRH 476
LG+GG +I EMR+ +GA IR+ K PK S +EE+ VQ ++F T L++
Sbjct: 277 LGEGGKVITEMRRRTGAEIRVYSKADKPKYLSFDEEL---------VQASVFSFTLGLQN 327
>gi|115482006|ref|NP_001064596.1| Os10g0414700 [Oryza sativa Japonica Group]
gi|78708635|gb|ABB47610.1| KH domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|113639205|dbj|BAF26510.1| Os10g0414700 [Oryza sativa Japonica Group]
gi|215693240|dbj|BAG88622.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222612825|gb|EEE50957.1| hypothetical protein OsJ_31513 [Oryza sativa Japonica Group]
Length = 586
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 96/217 (44%), Gaps = 8/217 (3%)
Query: 314 PEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPD 373
P FR+L +VG VIG G +R L +ET ++V+ +R ++I PD
Sbjct: 56 PGTSVFRMLIPATKVGAVIGHSGERLRRLCEETKACVRVIGGHFAAAERAVIIFAKEQPD 115
Query: 374 DRISAPQDAVLRVQTRIAR--AIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLS 431
+ DA+LRV I + V+ R+L S Q L+G GS+I ++K S
Sbjct: 116 EPKPPAIDALLRVYECIINDDGLDVRYNNIVVARILTPSEQAASLIGDQGSVINYIKKAS 175
Query: 432 GAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAF-----PSI 486
I ++ D +P A E++ ++ I G V +AL + LR + + P +
Sbjct: 176 KTNIHVIDGD-LPPVALEDDMIIEIWGLPARVHQALELVACHLRKYLVHRSVIPLFDPHV 234
Query: 487 NRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSF 523
+ P++P + G + PG YS + +F
Sbjct: 235 SIPISPVDMPPFHYSDHHEGLLHEASPGYYSLYAEAF 271
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 86/218 (39%), Gaps = 68/218 (31%)
Query: 42 FPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNK 101
+PG +FR+L P +K+ VIG GE + ++ ++T +RV + ER V+I A
Sbjct: 55 WPGTSVFRMLIPATKVGAVIGHSGERLRRLCEETKACVRVIGGHFAAAERAVIIFAK--- 111
Query: 102 KETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALL 161
++ D K +++ ALL
Sbjct: 112 -------------------------EQPDEPKPPAID--------------------ALL 126
Query: 162 LVFERMVEVEPETEVADQENTKSSKFVL-RLLVLSTQVGCLLGKGGCVIKQIDK------ 214
V+E ++ D + + + V+ R+L S Q L+G G VI I K
Sbjct: 127 RVYECIIN-------DDGLDVRYNNIVVARILTPSEQAASLIGDQGSVINYIKKASKTNI 179
Query: 215 ------LPTCALASDEVVQITGEVDTVRKALKLISHQL 246
LP AL D +++I G V +AL+L++ L
Sbjct: 180 HVIDGDLPPVALEDDMIIEIWGLPARVHQALELVACHL 217
>gi|341894976|gb|EGT50911.1| hypothetical protein CAEBREN_13773 [Caenorhabditis brenneri]
Length = 397
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 105/413 (25%), Positives = 172/413 (41%), Gaps = 69/413 (16%)
Query: 287 VADIHLPMPPSIPKFHESGVLDR----PKPSPEILT---------FRLLCHDERVGGVIG 333
A I L P ++ + H++ DR +P + T RLL + G +IG
Sbjct: 7 AAAIGLDSPKAMKREHDNDEADRTARHKRPKTDGFTEAIQQGKFEVRLLVSSKSAGAIIG 66
Query: 334 KGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARA 393
KGG I+ L+ E ++V + S T +R+ ++ A + VL + +
Sbjct: 67 KGGENIKRLRAEFNAHVQVPD--SNTPERVCTVT----------ADEKTVLNILKDVLPR 114
Query: 394 IPDNREQT--VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENE 451
+ DN + R+L+ + G L+G+ GS I E+R+ A ++I CA +
Sbjct: 115 LEDNFSERDPCEVRMLIHQSHAGALIGRNGSKIKELREKCSARLKIF-----TGCAPGST 169
Query: 452 EVVLI-NGEFEAVQEALFQITTRLRHHFFRDA----FPSINRPLNPTFLDQVSPFPSFIG 506
+ VLI +GE + V + ++ L+ + + PS + +P+ + + FP
Sbjct: 170 DRVLITSGEQKNVLAIIEEVMRELKEIPIKGSATPYLPSFH--YDPSNISEYGGFPG--- 224
Query: 507 RRELSPPGMYSNFGPSFHKFD--------AVGGPPPPG----SFHPHDDHSAFM------ 548
+S G ++ GPS + + GG PG SF D F
Sbjct: 225 --TMSSGGPPNSRGPSQQRGGQGPPGGPRSYGGAVTPGGGPRSFEA-GDFQQFRGGPVQG 281
Query: 549 HHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDG 608
+ ++ PG PP P GP G V +P L I G G
Sbjct: 282 YAMNAPGYPPQQGQFGGAPPANTGYGYGPGGGGPVT-----TAQVTIPSDLGGTIIGRGG 336
Query: 609 ACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSETE 661
+ +IRQ S A+IT+ +P G E +I I GT +Q H+AQ L+Q V + T+
Sbjct: 337 ERIARIRQDSGAQITL-EPSNGQPERIITIKGTEQQIHSAQYLLQQCVRNSTQ 388
Score = 39.3 bits (90), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 60 VIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNG 119
+IG+ GE +++I QD+G I +E + +G ER++ I+ ++ + +++ L R+ G
Sbjct: 331 IIGRGGERIARIRQDSGAQITLEPS-NGQPERIITIKGTEQQIHSAQYLLQQCVRNSTQG 389
Query: 120 RE 121
RE
Sbjct: 390 RE 391
>gi|328723973|ref|XP_003247998.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
isoform 3 [Acyrthosiphon pisum]
gi|328723975|ref|XP_003247999.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
isoform 4 [Acyrthosiphon pisum]
Length = 553
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 148/327 (45%), Gaps = 45/327 (13%)
Query: 175 EVADQE--NTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI-----DKLPTCALASDEVVQ 227
EV QE NT S +L++L + +G ++GK G IK+I K+ + + ++
Sbjct: 214 EVMQQEATNTNKSDVILKILAHNNLIGRIIGKEGNTIKRIMSETETKITVSSFNYERIIT 273
Query: 228 ITGEVDTVRKALKLISHQLLDNSPRDHESI-PGNPTGPS-HPLPDHSVSS-----QGAPY 280
+ G ++ + KA IS +L + D +S+ P P HP+ S + +G P
Sbjct: 274 VKGSIENMSKAEAQISAKLRQSFENDLQSMAPQTVMFPGLHPMAMMSATGITYPGRGGPT 333
Query: 281 ATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIR 340
+ A P +IP + + D + T L + VG +IG G+ IR
Sbjct: 334 SYQQFAPAPYPPMYPSTIPPINPALAADVQE------TAFLFIPNSAVGAIIGTKGSNIR 387
Query: 341 SLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQ-----------DAVLRVQTR 389
S+ + +G +KV + TE+ + G A D SA Q D+ + Q
Sbjct: 388 SMIRFSGASVKV----ASTENEKQGVVGNA--GDANSAQQASRKVTIVGTADSQWKAQGM 441
Query: 390 IARA------IPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQI 443
I +P+N E + +LV S+Q+G ++G+GGS + E+++++G+ I++ Q
Sbjct: 442 IFDKLRDEGFVPNNEEVRLTVEILVPSSQVGRIIGRGGSNVRELQRVTGSIIKL--PTQG 499
Query: 444 PKCASENEEVVLINGEFEAVQEALFQI 470
+E+ V I G F A Q A +I
Sbjct: 500 STDGTEDTTTVHIIGHFLATQSAQRRI 526
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 98/204 (48%), Gaps = 29/204 (14%)
Query: 291 HLPMPPSIPKFHESGVLDR----PKPSPEI------LTFRLLCHDERVGGVIGKGGAIIR 340
+ + P++ + + S + R P +P I R+L H + VG +IG+GG+ IR
Sbjct: 112 QIKVEPAMERRNRSAIRQRTYGAPGATPTIGNRQTEFPLRILVHSDMVGAIIGRGGSTIR 171
Query: 341 SLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNRE 399
+ Q+T + V + G+ ++ I I G +P++ +A + +L V + A + +
Sbjct: 172 QITQQTRARVDVHRKDNVGSLEKAITIYG--NPENCTNACRK-ILEVMQQEA---TNTNK 225
Query: 400 QTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQ--IPKCASENEEVVLIN 457
V+ ++L +N IG ++GK G+ I RI+ + + I + E ++ +
Sbjct: 226 SDVILKILAHNNLIGRIIGKEGNTIK----------RIMSETETKITVSSFNYERIITVK 275
Query: 458 GEFEAVQEALFQITTRLRHHFFRD 481
G E + +A QI+ +LR F D
Sbjct: 276 GSIENMSKAEAQISAKLRQSFEND 299
>gi|348528027|ref|XP_003451520.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like
[Oreochromis niloticus]
Length = 429
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 102/421 (24%), Positives = 161/421 (38%), Gaps = 96/421 (22%)
Query: 303 ESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDR 362
E R + + E++ R+L + G VIGKGG I++L+ + + V ++
Sbjct: 30 EEQAFKRSRNTDEMVELRVLLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDS------- 82
Query: 363 LIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMT--------RLLVASNQIG 414
SGP +RI + ++ + + + IP E + RLL+ + G
Sbjct: 83 ----SGP----ERILSVNASIDTIGEILLKIIPTLEEYQHYSGIDFDCELRLLIHQSLAG 134
Query: 415 CLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRL 474
++G G+ I E+R+ + I++ + C + VVL+ G+ E V E + I +
Sbjct: 135 GIIGVKGAKIKELRENTQTTIKLFQE----CCPHSTDRVVLVGGKPERVVECIKVILELV 190
Query: 475 RHHFFRDAFPSINRPLNPTFLDQVSPFPSFI------GRR-------------ELSPPGM 515
+P +P F D+ + F GRR E PP
Sbjct: 191 SEA----PIKGRAQPYDPNFYDETYDYGGFTMLFEERGRRPIGGFPIRVRGGFERMPPVR 246
Query: 516 YSN-FGPSFHKFDAVG---GPPPP------------------------------GSFH-P 540
S PS +D + GPPPP GS+H
Sbjct: 247 GSRPMPPSRRDYDDMSPRRGPPPPLSRGRGGSRARNLPLPPPPPPRGGGDRFSHGSYHGS 306
Query: 541 HDDHSAFMHHIHRPGMPPHMPDMKPWGPQGL-----MEVGGPMGFPDFVGPPHRRVPVVV 595
DD + R G M G + GG + D +G P V +
Sbjct: 307 MDDRPS-----DRRGRGDRYDSMSGGGYDNSSSWDHFQSGGRGSYSD-IGGPVITTQVTI 360
Query: 596 PRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAF 655
P+ L I G+ G +KQIR S A I I +P G+ + +I I+GT +Q AQ L+Q
Sbjct: 361 PKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNS 420
Query: 656 V 656
V
Sbjct: 421 V 421
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 56/111 (50%), Gaps = 4/111 (3%)
Query: 2 SLPLTPSKRPHDDDNHTEPNGKEKSQKLAGDYSENQPSKSFP--GG--IMFRVLCPVSKI 57
S+ PS R D + +G + D+ ++ S+ GG I +V P
Sbjct: 306 SMDDRPSDRRGRGDRYDSMSGGGYDNSSSWDHFQSGGRGSYSDIGGPVITTQVTIPKDLA 365
Query: 58 DGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENL 108
+IGK G+ + QI ++G +I+++E + GS++R++ I + ++ + ++ L
Sbjct: 366 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYL 416
>gi|225429818|ref|XP_002280789.1| PREDICTED: poly(rC)-binding protein 3-like [Vitis vinifera]
Length = 420
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 136/351 (38%), Gaps = 37/351 (10%)
Query: 318 TFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRIS 377
FRL+ VG +IG+ G II+ + + TG I V+ +GT D +++IS P R+S
Sbjct: 28 AFRLIVPGSAVGSIIGREGKIIKRISEGTGARIHVISLPAGTTDCIVLISAKEQPHLRLS 87
Query: 378 APQDAVLRVQTRIARAIP---------DNREQTVMTRLLVASNQIGCLLGKGGSIIAEMR 428
+AV+ V R+ P + + LV +Q ++GK GS + +
Sbjct: 88 PAMEAVIEVFKRVTGLYPIDGNGMCSKASEVKLSSVTFLVGYSQALSIIGKEGSRVRAIE 147
Query: 429 KLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFF-RDAFPSIN 487
+ SG + IL + +P S +E ++ I G+ V A+ + LR + P+ +
Sbjct: 148 ESSGTTVGILSR--VPFYVSPDERIIKIQGQVLKVMAAMEAVLYHLRLYLVDSSVIPAFS 205
Query: 488 RPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAF 547
T + Q S PG S + +A P S+ S +
Sbjct: 206 EKCK-TGISQADQSLSLHHSTPAHQPGADSMYSLPLLGHEAKVEAKIPSSY-----SSLY 259
Query: 548 MHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGED 607
G+P D P R + +P S I G
Sbjct: 260 AQEPVLGGLPLRRSDRA-------------------AAPAQRTERIKIPFSAAKDIIGIA 300
Query: 608 GACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMS 658
G + IR+ S + ITI + + E ++ + GT Q AQ LI+ + S
Sbjct: 301 GETIDHIRRTSGSIITIEEDRSLPDEYILEVRGTTSQLQTAQQLIEELLES 351
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 42 FPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDN- 100
+PG FR++ P S + +IG++G+++ +IS+ TG I V +G+ + +V+I A +
Sbjct: 23 WPGQNAFRLIVPGSAVGSIIGREGKIIKRISEGTGARIHVISLPAGTTDCIVLISAKEQP 82
Query: 101 KKETSENLEASIE 113
S +EA IE
Sbjct: 83 HLRLSPAMEAVIE 95
>gi|410952456|ref|XP_003982896.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
isoform 2 [Felis catus]
Length = 580
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 117/479 (24%), Positives = 190/479 (39%), Gaps = 127/479 (26%)
Query: 39 SKSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEAS 98
SK P + R+L P + +IGK+G + I++ T I V
Sbjct: 189 SKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVH---------------- 232
Query: 99 DNKKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQK 158
R EN G E S+ L++ + TS K
Sbjct: 233 ---------------RKENAGAAEKSITI-------------------LSTPEGTSAACK 258
Query: 159 ALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDK---- 214
++L + + E D + T+ + L++L + VG L+GK G +K+I++
Sbjct: 259 SILEIMHK--------EAQDIKFTE--EIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDT 308
Query: 215 ------LPTCALASDE-VVQITGEVDTVRKALKLISHQLLDNSPRDHES-------IPG- 259
L L + E + + G V+T KA + I ++ ++ D S IPG
Sbjct: 309 KITISPLQELTLYNPERTITVKGNVETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGL 368
Query: 260 --NPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEIL 317
N G P + G P A M P P+F ++ PE
Sbjct: 369 NLNALGLFPPTSGMPPPTSGPPSA------------MTPPYPQFEQA---------PETE 407
Query: 318 TFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRI 376
T L VG +IGK G I+ L + G IK+ A + + R+++I+GP
Sbjct: 408 TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPP------ 461
Query: 377 SAPQDAVLRVQTRIARAIPD------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKL 430
+A + Q RI I + E + + V S G ++GKGG + E++ L
Sbjct: 462 ----EAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNL 517
Query: 431 SGAYIRILGKDQIPKCASENEEVVL-INGEFEAVQEA---LFQITTRLRHHFFRDAFPS 485
S A + ++ +DQ P EN++VV+ I G F A Q A + +I T+++ H + A S
Sbjct: 518 SSAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVKQHQQQKALQS 572
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 141/359 (39%), Gaps = 70/359 (19%)
Query: 305 GVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV--MEAVSGTEDR 362
G + + KP L RLL + VG +IGK GA IR++ ++T I V E E
Sbjct: 186 GSISKQKPCD--LPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKS 243
Query: 363 LIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGS 422
+ ++S P + SA ++L + + A+ I E + ++L +N +G L+GK G
Sbjct: 244 ITILSTP----EGTSAACKSILEIMHKEAQDIKFTEE--IPLKILAHNNFVGRLIGKEGR 297
Query: 423 IIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDA 482
+ ++ + + I I ++ E + + G E +A +I ++R + D
Sbjct: 298 NLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGNVETCAKAEEEIMKKIRESYEND- 354
Query: 483 FPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHD 542
S+N L + PG+ N + F G PPP S P
Sbjct: 355 IASMN--LQAHLI-----------------PGLNLN---ALGLFPPTSGMPPPTSGPP-- 390
Query: 543 DHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDF-VGPPHRRVPVVVPRSLVP 601
SA PP +P F P V + +P V
Sbjct: 391 --SAM--------TPP---------------------YPQFEQAPETETVHLFIPALSVG 419
Query: 602 IIQGEDGACLKQIRQISDAKITITDPK-PGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
I G+ G +KQ+ + + A I I + P A ++II+G PE AQ I + E
Sbjct: 420 AIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFKAQGRIYGKIKEE 478
>gi|428183593|gb|EKX52450.1| hypothetical protein GUITHDRAFT_101621 [Guillardia theta CCMP2712]
Length = 358
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 136/348 (39%), Gaps = 47/348 (13%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV---MEAVSGTEDRLIVISGPAHPD 373
+ ++L ++ G VIGK GA I S+K +G +KV E GT DR+++ISG
Sbjct: 36 MALKILIGNKSAGSVIGKAGATINSIKDTSGAKVKVSSNSETFPGTADRIVLISG----- 90
Query: 374 DRISAPQDAVLRVQTRIAR-----AIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMR 428
++ A V + + R +PD+ + +++ + G ++GKGG I +R
Sbjct: 91 -KVETVLSAAKMVISEMYRDPNSGRVPDDVNAVMTVSIVIPAAACGLVIGKGGEKINSLR 149
Query: 429 KLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINR 488
+ + A I++ KD++ NE +V I G Q A+ +I H D
Sbjct: 150 EETQAKIQLQAKDKVA-IPGLNERIVTIQGTLPQAQTAVEKIV----HLIHEDG------ 198
Query: 489 PLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFH-PHDDHSAF 547
N + + + + G + G+ +G G G P A
Sbjct: 199 --NIRYENLGTNY----GMSGMMGKGLGQGYGMGMMPMQ--GAAAMYGGMQMPMGMDMAS 250
Query: 548 MHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGED 607
PGMP +P + WG M H + + + V + G+
Sbjct: 251 QGMGMAPGMPGVVPGQEYWG----------MSQHGLGTDMHTVLKLSITDDAVGPLLGKG 300
Query: 608 GACLKQIRQISDAKITIT---DPKPGATETVIIISGTPEQTHAAQSLI 652
G LK+ +S A I ++ D PG I I GT AQ L+
Sbjct: 301 GCNLKEYISVSGANIKVSQRGDTIPGTNNRYITIQGTAAAVQYAQLLV 348
>gi|403287927|ref|XP_003935171.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
[Saimiri boliviensis boliviensis]
Length = 579
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 117/478 (24%), Positives = 189/478 (39%), Gaps = 128/478 (26%)
Query: 40 KSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASD 99
K P + R+L P + +IGK+G + I++ T I V
Sbjct: 190 KQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVH----------------- 232
Query: 100 NKKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKA 159
R EN G E S+ L++ + TS K+
Sbjct: 233 --------------RKENAGAAEKSITI-------------------LSTPEGTSAACKS 259
Query: 160 LLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDK----- 214
+L + + E D + T+ + L++L + VG L+GK G +K+I++
Sbjct: 260 ILEIMHK--------EAQDIKFTE--EIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTK 309
Query: 215 -----LPTCALASDE-VVQITGEVDTVRKALKLISHQLLDNSPRDHES-------IPG-- 259
L L + E + + G V+T KA + I ++ ++ D S IPG
Sbjct: 310 ITISPLQELTLYNPERTITVKGNVETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGLN 369
Query: 260 -NPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILT 318
N G P + G P A M P P+F +S E T
Sbjct: 370 LNALGLFPPTSGMPPPTSGPPSA------------MTPPYPQFEQS----------ETET 407
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRIS 377
L VG +IGK G I+ L + G IK+ A + + R+++I+GP
Sbjct: 408 VHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPP------- 460
Query: 378 APQDAVLRVQTRIARAIPD------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLS 431
+A + Q RI I + E + + V S G ++GKGG + E++ LS
Sbjct: 461 ---EAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLS 517
Query: 432 GAYIRILGKDQIPKCASENEEVVL-INGEFEAVQEA---LFQITTRLRHHFFRDAFPS 485
A + ++ +DQ P EN++VV+ I G F A Q A + +I T+++ H + A PS
Sbjct: 518 SAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVKQHQQQKALPS 571
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 137/352 (38%), Gaps = 67/352 (19%)
Query: 311 KPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV--MEAVSGTEDRLIVISG 368
K P L RLL + VG +IGK GA IR++ ++T I V E E + ++S
Sbjct: 190 KQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILST 249
Query: 369 PAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMR 428
P + SA ++L + + A+ I E + ++L +N +G L+GK G + ++
Sbjct: 250 P----EGTSAACKSILEIMHKEAQDIKFTEE--IPLKILAHNNFVGRLIGKEGRNLKKIE 303
Query: 429 KLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINR 488
+ + I I ++ E + + G E +A +I ++R + D S+N
Sbjct: 304 QDTDTKITISPLQEL--TLYNPERTITVKGNVETCAKAEEEIMKKIRESYEND-IASMN- 359
Query: 489 PLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFM 548
L + PG+ N + F G PPP S P SA
Sbjct: 360 -LQAHLI-----------------PGLNLN---ALGLFPPTSGMPPPTSGPP----SAM- 393
Query: 549 HHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDG 608
PP +P F V + +P V I G+ G
Sbjct: 394 -------TPP---------------------YPQFEQSETETVHLFIPALSVGAIIGKQG 425
Query: 609 ACLKQIRQISDAKITITDPK-PGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
+KQ+ + + A I I + P A ++II+G PE AQ I + E
Sbjct: 426 QHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFKAQGRIYGKIKEE 477
>gi|322792902|gb|EFZ16735.1| hypothetical protein SINV_14612 [Solenopsis invicta]
Length = 555
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 152/320 (47%), Gaps = 38/320 (11%)
Query: 175 EVADQE--NTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI----DKLPTCALASD----- 223
EV QE NT + L++L + +G ++GKGG IK+I D T + +D
Sbjct: 178 EVMQQEANNTNKGEITLKILAHNNLIGRIIGKGGNTIKRIMQDTDTKITVSSINDINSFN 237
Query: 224 --EVVQITGEVDTVRKALKLISHQLLDNSPRDHESI-PGNPTGPS-HPLPDHSVSSQGAP 279
++ + G +D + KA +IS +L + D +++ P + P HP+ +S+ G
Sbjct: 238 LERIITVKGSIDNMSKAESMISSKLRQSYENDLQAMAPQSMMFPGLHPMA--MMSTAGMG 295
Query: 280 YAT---GHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGG 336
Y++ G P S+P + GV P + TF L + VG +IG G
Sbjct: 296 YSSRGPGLYGSGPAPYPYQSSLPT--QQGV---PASDTQETTF-LYIPNNSVGAIIGTKG 349
Query: 337 AIIRSLKQETGCDIKV--ME----AVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRI 390
+ IR++ + +G +K+ +E A TE ++ ++ P+ + A ++ + R
Sbjct: 350 SHIRNIIRFSGASVKIAPLEQDKPAEQQTERKVTIV---GSPESQWKA--QYLIFEKMRE 404
Query: 391 ARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASEN 450
+ + + +LV S Q+G ++GKGG + E+++++G+ I++ + P A E
Sbjct: 405 EGYVAGTEDVRLTIEILVPSTQVGRIIGKGGQNVRELQRVTGSVIKLSEQQATPPSA-EE 463
Query: 451 EEVVLINGEFEAVQEALFQI 470
E V I G F +VQ A +I
Sbjct: 464 ETTVHIIGPFFSVQSAQRRI 483
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 138/342 (40%), Gaps = 65/342 (19%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRIS 377
R+L + VG +IG+ G IR + Q T + V + G+ ++ I I G +P++ +
Sbjct: 114 LRILVQSDMVGAIIGRQGTTIRQITQLTRARVDVHRKDNVGSLEKAITIYG--NPENCTN 171
Query: 378 APQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRI 437
A + +L V + A + + + ++L +N IG ++GKGG+ I + + + I +
Sbjct: 172 ACKK-ILEVMQQEAN---NTNKGEITLKILAHNNLIGRIIGKGGNTIKRIMQDTDTKITV 227
Query: 438 LGKDQIPKCASEN-EEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLD 496
I S N E ++ + G + + +A I+++LR + D + + P
Sbjct: 228 ---SSINDINSFNLERIITVKGSIDNMSKAESMISSKLRQSYENDL-----QAMAP---- 275
Query: 497 QVSPFPSFIGRRELSPPGM-YSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPG 555
Q FP +S GM YS+ GP + GP P +P+
Sbjct: 276 QSMMFPGLHPMAMMSTAGMGYSSRGPGLYG----SGPAP----YPYQS------------ 315
Query: 556 MPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIR 615
+P + G P + +P + V I G G+ ++ I
Sbjct: 316 ---SLPTQQ--------------GVP--ASDTQETTFLYIPNNSVGAIIGTKGSHIRNII 356
Query: 616 QISDAKITIT-----DPKPGATETVIIISGTPEQTHAAQSLI 652
+ S A + I P TE + I G+PE AQ LI
Sbjct: 357 RFSGASVKIAPLEQDKPAEQQTERKVTIVGSPESQWKAQYLI 398
>gi|332025247|gb|EGI65421.1| Insulin-like growth factor 2 mRNA-binding protein 1 [Acromyrmex
echinatior]
Length = 568
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 150/316 (47%), Gaps = 38/316 (12%)
Query: 175 EVADQE--NTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI----DKLPTCALASD----- 223
EV QE NT + L++L + +G ++GKGG IK+I D T + +D
Sbjct: 187 EVMQQEANNTNKGEITLKILAHNNLIGRIIGKGGNTIKRIMQDTDTKITVSSINDINSFN 246
Query: 224 --EVVQITGEVDTVRKALKLISHQLLDNSPRDHESI-PGNPTGPS-HPLPDHSVSSQGAP 279
++ + G +D + KA +IS +L + D +++ P + P HP+ +S+ G
Sbjct: 247 LERIITVKGSIDNMSKAESMISSKLRQSYENDLQAMAPQSMMFPGLHPMA--MMSTAGMG 304
Query: 280 YAT---GHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGG 336
Y++ G P S+P + GV P + TF L + VG +IG G
Sbjct: 305 YSSRGPGLYGSGPAPYPYQSSLPT--QQGV---PASDTQETTF-LYIPNNSVGAIIGTKG 358
Query: 337 AIIRSLKQETGCDIKV--ME----AVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRI 390
+ IR++ + +G +K+ +E A TE ++ ++ P+ + A ++ + R
Sbjct: 359 SHIRNIIRFSGASVKIAPLEQDKPAEQQTERKVTIV---GSPESQWKA--QYLIFEKMRE 413
Query: 391 ARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASEN 450
+ + + +LV S Q+G ++GKGG + E+++++G+ I++ + P A E
Sbjct: 414 EGYVAGTEDVRLTIEILVPSTQVGRIIGKGGQNVRELQRVTGSVIKLSEQQATPPSA-EE 472
Query: 451 EEVVLINGEFEAVQEA 466
E V I G F +VQ A
Sbjct: 473 ETTVHIIGPFFSVQSA 488
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 139/342 (40%), Gaps = 65/342 (19%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRIS 377
R+L + VG +IG+ G+ IR + Q T + V + G+ ++ I I G +P++ +
Sbjct: 123 LRILVQSDMVGAIIGRQGSTIRQITQMTRARVDVHRKDNVGSLEKAITIYG--NPENCTN 180
Query: 378 APQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRI 437
A + +L V + A + + + ++L +N IG ++GKGG+ I + + + I +
Sbjct: 181 ACKK-ILEVMQQEAN---NTNKGEITLKILAHNNLIGRIIGKGGNTIKRIMQDTDTKITV 236
Query: 438 LGKDQIPKCASEN-EEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLD 496
I S N E ++ + G + + +A I+++LR + D + + P
Sbjct: 237 ---SSINDINSFNLERIITVKGSIDNMSKAESMISSKLRQSYENDL-----QAMAP---- 284
Query: 497 QVSPFPSFIGRRELSPPGM-YSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPG 555
Q FP +S GM YS+ GP + GP P +P+
Sbjct: 285 QSMMFPGLHPMAMMSTAGMGYSSRGPGLYG----SGPAP----YPYQS------------ 324
Query: 556 MPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIR 615
+P + G P + +P + V I G G+ ++ I
Sbjct: 325 ---SLPTQQ--------------GVP--ASDTQETTFLYIPNNSVGAIIGTKGSHIRNII 365
Query: 616 QISDAKITIT-----DPKPGATETVIIISGTPEQTHAAQSLI 652
+ S A + I P TE + I G+PE AQ LI
Sbjct: 366 RFSGASVKIAPLEQDKPAEQQTERKVTIVGSPESQWKAQYLI 407
>gi|171687621|ref|XP_001908751.1| hypothetical protein [Podospora anserina S mat+]
gi|170943772|emb|CAP69424.1| unnamed protein product [Podospora anserina S mat+]
Length = 500
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 90/377 (23%), Positives = 147/377 (38%), Gaps = 49/377 (12%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
+ R + +IGKGG + ++Q +G V + G +R++ +SG D
Sbjct: 135 IHIRAVISSPEAATIIGKGGENVSKIRQSSGAKCTVSDYQKGAVERILTVSGVV---DAA 191
Query: 377 SAPQDAVLRVQTRIARAIPDNRE-QTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYI 435
+ ++R + P N+ +T RLL+ IG ++GKGGS I E+++ SGA
Sbjct: 192 AKAFGLIIRTLNNEPLSEPSNQHSKTYPLRLLIPHVLIGSIIGKGGSRIKEIQEASGA-- 249
Query: 436 RILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHF---FRDA---------- 482
R+ D +SE +++ G +AV A + + + L F A
Sbjct: 250 RLNASDSCLPASSERS--LVVTGVADAVHIATYYVGSTLLEQLNERFGGAAASAYATRSG 307
Query: 483 -----------FPSINRPLNPTF-----LDQVSPFPSFIGRRELSPPGMYSNFGPSFHKF 526
P + +P F + P P R PP Y P + +
Sbjct: 308 GPAAVTGGMTVVPYVPQPAGGNFGQRDHYNNRRPDP----RAHHMPPQAYGG-APQYGAY 362
Query: 527 DAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGP 586
P P H +A + P MPPH GPQ GP G
Sbjct: 363 PQAAHPGPAVPMHFAGAQAAGGYGPAAPHMPPHAGHAGHVGPQPHT---GPHGPQAAGSG 419
Query: 587 PHRRVP----VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTP 642
P + +P +V I G+ G + +IRQIS + I I +P+ + E ++ I+GT
Sbjct: 420 GAAGGPMTQQIYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQDNSNERLVTITGTD 479
Query: 643 EQTHAAQSLIQAFVMSE 659
E A ++ + +E
Sbjct: 480 ECNKMALYMLYTRLENE 496
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 45/76 (59%), Gaps = 5/76 (6%)
Query: 405 RLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQ 464
++ + ++ +G ++GKGG I E+R++SG+ I+I P+ S NE +V I G E +
Sbjct: 429 QIYIPNDMVGAIIGKGGQKINEIRQISGSVIKI----NEPQDNS-NERLVTITGTDECNK 483
Query: 465 EALFQITTRLRHHFFR 480
AL+ + TRL + R
Sbjct: 484 MALYMLYTRLENEKHR 499
Score = 39.3 bits (90), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 30/51 (58%)
Query: 49 RVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASD 99
++ P + +IGK G+ +++I Q +G I++ E S+ERLV I +D
Sbjct: 429 QIYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQDNSNERLVTITGTD 479
>gi|147903491|ref|NP_001091320.1| poly(rC) binding protein 1 [Xenopus laevis]
gi|124481736|gb|AAI33216.1| LOC100037147 protein [Xenopus laevis]
Length = 221
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 87/157 (55%), Gaps = 11/157 (7%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R++ I+GP D
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT--DAIF 69
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + + I ++ ++ + V RL+V ++Q G L+GKGGS I E+R+ +G+
Sbjct: 70 KAFAMIAYKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGS 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
+++ G D +P + E V I+G +A+ + + QI
Sbjct: 130 QVQVAG-DMLP---NSTERAVTISGTPDAIIQCVKQI 162
Score = 42.4 bits (98), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 61/123 (49%), Gaps = 22/123 (17%)
Query: 181 NTKSSK--FVLRLLVLSTQVGCLLGKGGCVIKQI------------DKLPTCALASDEVV 226
+T +SK LRL+V ++Q G L+GKGG IK+I D LP +++ V
Sbjct: 90 STATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGSQVQVAGDMLPN---STERAV 146
Query: 227 QITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPL---PDHSVSSQGAPYATG 283
I+G D + + +K I +L++ P+ +IP P S P+ + S QG YA
Sbjct: 147 TISGTPDAIIQCVKQICVVMLESPPKGA-TIPYRPKPASAPVIFAGGQAYSIQGQ-YAIP 204
Query: 284 HRD 286
H D
Sbjct: 205 HPD 207
>gi|408395856|gb|EKJ75028.1| hypothetical protein FPSE_04740 [Fusarium pseudograminearum CS3096]
Length = 372
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 86/363 (23%), Positives = 144/363 (39%), Gaps = 68/363 (18%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT R + + G +IGKGG + L+ ETG V + V G DR++ I+G
Sbjct: 47 LTLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTITGGC------ 100
Query: 377 SAPQDAVLRVQTRIARAIPDNREQTVM-----------TRLLVASNQIGCLLGKGGSIIA 425
DA+ R +ARA+ + M +LL++ NQ+G ++G+ G I
Sbjct: 101 ----DAISRAYAIVARALLEGAPAMGMGGVVQSNGTHPIKLLISHNQMGTIIGRQGLKIK 156
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPS 485
++ SG + + K+ +P+ E +V + G E +Q A+++I L + R
Sbjct: 157 HIQDASGVRM-VAQKEMLPQS---TERIVEVQGTPEGIQRAIWEICKCLVDDWQRGTGTV 212
Query: 486 INRPLNPT------FLDQVSPFPSFIGRREL--SPPGMYSNFGPSFHKFDAVGGPPPPGS 537
+ P+ T + F GR + SP M + G F GS
Sbjct: 213 LYNPVVRTQPSSSGSTSGGAGFNQGSGRSDYGGSPRVMRTGNGADFSN----------GS 262
Query: 538 FHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPR 597
P++ S + P P H D G + + +P
Sbjct: 263 SRPYNRRSDSDAALRGP--PTH----------------------DENGEEIQTQNISIPA 298
Query: 598 SLVPIIQGEDGACLKQIRQISDAKITITD-PKPGATETVIIISGTPEQTHAAQSLIQAFV 656
+V I G G+ + +IR+ S A+I+I P E + I GT + +A L+ +
Sbjct: 299 DMVGCIIGRAGSKISEIRKTSGARISIAKAPHDETGERMFTIMGTAKANESALFLLYENL 358
Query: 657 MSE 659
+E
Sbjct: 359 EAE 361
Score = 39.7 bits (91), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 47/225 (20%), Positives = 92/225 (40%), Gaps = 50/225 (22%)
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQIDKLPTCAL---------ASDEVVQITGEVDTVRKAL 239
++LL+ Q+G ++G+ G IK I + +++ +V++ G + +++A+
Sbjct: 135 IKLLISHNQMGTIIGRQGLKIKHIQDASGVRMVAQKEMLPQSTERIVEVQGTPEGIQRAI 194
Query: 240 KLISHQLLDNSPRDHESIPGNPTGPSHPL-----------------------PDHSVSSQ 276
I L+D+ R ++ NP + P P +
Sbjct: 195 WEICKCLVDDWQRGTGTVLYNPVVRTQPSSSGSTSGGAGFNQGSGRSDYGGSPRVMRTGN 254
Query: 277 GAPYATG------HRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGG 330
GA ++ G R +D L PP+ E+G EI T + + VG
Sbjct: 255 GADFSNGSSRPYNRRSDSDAALRGPPT---HDENG--------EEIQTQNISIPADMVGC 303
Query: 331 VIGKGGAIIRSLKQETGCDIKVMEA-VSGTEDRLIVISGPAHPDD 374
+IG+ G+ I +++ +G I + +A T +R+ I G A ++
Sbjct: 304 IIGRAGSKISEIRKTSGARISIAKAPHDETGERMFTIMGTAKANE 348
>gi|401885149|gb|EJT49276.1| cytoplasm protein [Trichosporon asahii var. asahii CBS 2479]
gi|406694587|gb|EKC97911.1| cytoplasm protein [Trichosporon asahii var. asahii CBS 8904]
Length = 351
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 87/170 (51%), Gaps = 5/170 (2%)
Query: 313 SPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG-PAH 371
SPE LT R L + G +IGKGGA I +++Q C V + V G +DR++ +SG P
Sbjct: 15 SPEELTLRSLVSTKEAGIIIGKGGATIANIRQVANCKAGVSKVVPGVQDRVLSVSGDPEA 74
Query: 372 PDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLS 431
+ +L + P Q RLL++ N +G ++G+ G I +++ +S
Sbjct: 75 IAAAYAEVARLLLETPLSDSSMPPPPVNQFTSIRLLISHNLMGTVIGRAGVKIKQIQDMS 134
Query: 432 GAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRD 481
GA + + K+ +P+ E VV + G +A++ A+F+I L + R+
Sbjct: 135 GARM-VASKEMLPQS---TERVVEVQGAQDAIKTAIFEIAKCLLEDWERN 180
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 138/336 (41%), Gaps = 40/336 (11%)
Query: 186 KFVLRLLVLSTQVGCLLGKGGCVIKQIDKLPTCALA--------SDEVVQITGEVDTVRK 237
+ LR LV + + G ++GKGG I I ++ C D V+ ++G+ + +
Sbjct: 18 ELTLRSLVSTKEAGIIIGKGGATIANIRQVANCKAGVSKVVPGVQDRVLSVSGDPEAIAA 77
Query: 238 ALKLISHQLLDNSPRDHESIPGNPTGP--------SHPLPDHSVSSQGAPYA-----TGH 284
A ++ LL+ +P S+P P SH L + G +G
Sbjct: 78 AYAEVARLLLE-TPLSDSSMPPPPVNQFTSIRLLISHNLMGTVIGRAGVKIKQIQDMSGA 136
Query: 285 RDVADIHLPMPPSIPKFHE-SGVLDRPKPSPEILTFRLLCHDERVGGVI-------GKGG 336
R VA + +P S + E G D K + + LL ER G + G G
Sbjct: 137 RMVASKEM-LPQSTERVVEVQGAQDAIKTAIFEIAKCLLEDWERNTGTVQYHPGAAGDAG 195
Query: 337 AIIRSLKQE--TGCDIKVMEAVSGTEDRLIVISGPAHPDDRIS--APQDAVLRVQTRIAR 392
+ L + TG + G + D R+S + + R++
Sbjct: 196 VLAGGLGAQAVTGPTGGIRRTSMGGFGSGSPGPNFNNSDRRVSRGSISGGTSGQERRVSE 255
Query: 393 AIPDNREQTVMTR-LLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENE 451
+ P + + T+ + + S+ +GC++G+GG+ I E+R+LSG+ I I ++P + E
Sbjct: 256 SQPVLNDPNLRTQNISIPSDMVGCIIGRGGTKITEIRRLSGSRISIA---KVPHDET-GE 311
Query: 452 EVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSIN 487
+ I G E+ + AL + ++L R SI+
Sbjct: 312 RMFTIVGTAESTERALMLLYSQLESEKERRVNQSID 347
>gi|390347463|ref|XP_792931.3| PREDICTED: poly(rC)-binding protein 3-like [Strongylocentrotus
purpuratus]
Length = 369
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 114/259 (44%), Gaps = 33/259 (12%)
Query: 402 VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFE 461
V RL+V ++Q G L+GKGGS I ++R+ + A I + + +P S E V I+G E
Sbjct: 18 VSLRLIVPTSQCGSLIGKGGSKIKDIRETTSASITV-ASEMLP---SSTERAVTISGTPE 73
Query: 462 AVQEALFQITTRLRHHFFRDA-FPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFG 520
A+ +A++Q+ + + A P +P +P G ++ ++
Sbjct: 74 AITKAIYQVCCVMLESPPKGATIPYRPKP-------ATAPIIFAGGSVSMTEQHLHQQQA 126
Query: 521 PSFHKFDAVGGPPPPGSFHPHDDHSAFMHHI--HRPGMPPHMPDMKPWGPQGLMEVGGPM 578
+ H A+ P D + H + H P +P P+ P L +
Sbjct: 127 YAVHGNYALAQP----------DLTKLHHQLALHHQQTPYAIPGQTPFSPAALTQFAAQT 176
Query: 579 GFPDFVGPPHRR-----VPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATE 633
P PP + + +P L+ + G G +++IRQ+S A I I + + G+T+
Sbjct: 177 AAP----PPQVQGQATTQEITIPNHLIGCVIGRGGTKIQEIRQMSGANIKIANSQEGSTD 232
Query: 634 TVIIISGTPEQTHAAQSLI 652
+ I+G+PE AQ LI
Sbjct: 233 RSVTITGSPESVAVAQCLI 251
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 98/221 (44%), Gaps = 42/221 (19%)
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQIDKLPTCAL---------ASDEVVQITGEVDTVRKAL 239
LRL+V ++Q G L+GKGG IK I + + ++ +++ V I+G + + KA+
Sbjct: 20 LRLIVPTSQCGSLIGKGGSKIKDIRETTSASITVASEMLPSSTERAVTISGTPEAITKAI 79
Query: 240 KLISHQLLDNSPRDHESIPGNP---------TGPSHPLPDHSVSSQGA-----PYATGHR 285
+ +L++ P+ +IP P G S + + + Q A YA
Sbjct: 80 YQVCCVMLESPPKG-ATIPYRPKPATAPIIFAGGSVSMTEQHLHQQQAYAVHGNYALAQP 138
Query: 286 DVADIHLPM------------------PPSIPKFHESGVLDRPKPSPEILTFRLLCHDER 327
D+ +H + P ++ +F P+ + T + +
Sbjct: 139 DLTKLHHQLALHHQQTPYAIPGQTPFSPAALTQFAAQTAAPPPQVQGQATTQEITIPNHL 198
Query: 328 VGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
+G VIG+GG I+ ++Q +G +IK+ + G+ DR + I+G
Sbjct: 199 IGCVIGRGGTKIQEIRQMSGANIKIANSQEGSTDRSVTITG 239
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 5/93 (5%)
Query: 382 AVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKD 441
A+ + + A P + Q + + ++ IGC++G+GG+ I E+R++SGA I+I
Sbjct: 168 ALTQFAAQTAAPPPQVQGQATTQEITIPNHLIGCVIGRGGTKIQEIRQMSGANIKIANSQ 227
Query: 442 QIPKCASENEEVVLINGEFEAVQEALFQITTRL 474
+ + V I G E+V A I T L
Sbjct: 228 E-----GSTDRSVTITGSPESVAVAQCLINTSL 255
>gi|386771590|ref|NP_001246875.1| mushroom-body expressed, isoform K [Drosophila melanogaster]
gi|383292065|gb|AFH04546.1| mushroom-body expressed, isoform K [Drosophila melanogaster]
Length = 573
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 147/372 (39%), Gaps = 55/372 (14%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RL+ + VG +IGK G I+ ++E+G I + + +R++ +SG
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDG--SCPERIVTVSGTT------ 75
Query: 377 SAPQDAVLRVQTRIARAIPDNREQ----------TVMTRLLVASNQIGCLLGKGGSIIAE 426
+A+ T I + + Q + RL+V ++Q G L+GK GS I E
Sbjct: 76 ----NAIFSAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKE 131
Query: 427 MRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDA-FPS 485
+R+ +G I++ + +P + E V ++G E + + ++QI + R A P
Sbjct: 132 IRQTTGCSIQV-ASEMLP---NSTERAVTLSGSAEQITQCIYQICLVMLESPPRGATIPY 187
Query: 486 INRP--LNPTFLDQVSPFP----SFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFH 539
+P P L F + +E P + H + G P
Sbjct: 188 RPKPQVTGPVILANGQAFTIQGNYAVPTQETCPVFPLALATGGLHA--GISGLADPLLKG 245
Query: 540 PHDDHSAFMHHIHRPGMPPHMPD------------MKPWGPQGLMEVGGPMGFPDFVGPP 587
H + HH H MP + M P G+ P
Sbjct: 246 AHLQGAIPAHHHHLQQMPDVAKNPLASLAALGLAGMNPASTGGINHTANPANRAQ----- 300
Query: 588 HRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKP---GATETVIIISGTPEQ 644
++ + V L+ I G+ G + +IRQIS A I I++ + G T+ I ISG P+
Sbjct: 301 QQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDS 360
Query: 645 THAAQSLIQAFV 656
AQ LI V
Sbjct: 361 VALAQYLINMSV 372
>gi|385305943|gb|EIF49885.1| kh domain rna binding protein [Dekkera bruxellensis AWRI1499]
Length = 541
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 94/364 (25%), Positives = 144/364 (39%), Gaps = 61/364 (16%)
Query: 314 PEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPD 373
P + FR+LC V+GKGG I+ +K+ + I V + + G +R+I + GPA
Sbjct: 153 PTYVHFRMLCTISEAATVVGKGGETIKKIKELSNARINVSDNLKGVPERVISVRGPA--- 209
Query: 374 DRISAPQDAVLRVQTRIARAIPDNRE-QTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSG 432
+ ++ ++R+Q +P + E Q RLL +G ++GK GS E+ + S
Sbjct: 210 EYVAKAFGLIVRMQLGEPLNVPSSLESQQYNLRLLFPHTIMGYIIGKKGSRFREIEESSA 269
Query: 433 AYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHH--------------F 478
A ++ DQI ++ + V+ ING +A+ A + I + H F
Sbjct: 270 AALK--ANDQILPAST--DRVLNINGVADAIHIATYYIAQTVIEHKQQMSKAIYYNPANF 325
Query: 479 FRDAFPSIN---RPLNPTFLD---------QVSPFPSFIGRRELSPPGMYSNFGPSFHKF 526
+ P +N R + Q P P F G P M +G +
Sbjct: 326 AQPTIPLVNSSARRFQHRMMGDFRGGRMGRQFGPQPGF-GPMMGMPSQMMGMYGQMSPQG 384
Query: 527 DAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGP 586
+A G P G D + M I G PP M P PQ P P V
Sbjct: 385 NANGQSPESG------DGQSNMGRIP-GGKPPQMGGYFP--PQ-----YAPQFNPAAVAS 430
Query: 587 PHRRVPVV------------VPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATET 634
R V VP+ + +I G G LK IRQ + + I D PG+TE
Sbjct: 431 NTRAETVTTGADGKLNQDIFVPQKHIGLIIGRGGRNLKDIRQQTGCYVKINDEVPGSTER 490
Query: 635 VIII 638
+ +
Sbjct: 491 KLTL 494
Score = 42.0 bits (97), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 406 LLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQE 465
+ V IG ++G+GG + ++R+ +G Y++I D++P S ++ L++ +Q
Sbjct: 449 IFVPQKHIGLIIGRGGRNLKDIRQQTGCYVKI--NDEVP--GSTERKLTLMSNNMYGIQN 504
Query: 466 ALFQITTRLRHHFFRD 481
AL I ++ + R+
Sbjct: 505 ALLLINNKIENEKMRE 520
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 40/64 (62%), Gaps = 7/64 (10%)
Query: 328 VGGVIGKGGAIIRSLKQETGCDIKVMEAVSG-TEDRLIVISGPAHPDDRISAPQDAVLRV 386
+G +IG+GG ++ ++Q+TGC +K+ + V G TE +L ++S + + Q+A+L +
Sbjct: 456 IGLIIGRGGRNLKDIRQQTGCYVKINDEVPGSTERKLTLMS------NNMYGIQNALLLI 509
Query: 387 QTRI 390
+I
Sbjct: 510 NNKI 513
Score = 39.7 bits (91), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 31/53 (58%)
Query: 43 PGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVI 95
P + FR+LC +S+ V+GK GE + +I + + I V + + G ER++ +
Sbjct: 153 PTYVHFRMLCTISEAATVVGKGGETIKKIKELSNARINVSDNLKGVPERVISV 205
>gi|322707130|gb|EFY98709.1| KH domain RNA-binding protein [Metarhizium anisopliae ARSEF 23]
Length = 368
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 145/362 (40%), Gaps = 70/362 (19%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT R + + G +IGKGG + L+ ETG V + V G DR++ I+G
Sbjct: 47 LTLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTITGEC------ 100
Query: 377 SAPQDAVLRVQTRIARAIPDNREQTVM-----------TRLLVASNQIGCLLGKGGSIIA 425
DA+ R +ARA+ + M +LL++ NQ+G ++G+ G I
Sbjct: 101 ----DAISRAYAIVARALLEGAPAMGMGGIVQSNGTHPIKLLISHNQMGTIIGRQGLKIK 156
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPS 485
++ +SG + + K+ +P+ E +V + G + +Q A+++I L + R
Sbjct: 157 HIQDVSGVRM-VAQKEMLPQS---TERIVEVQGTPDGIQRAVWEICKCLVDDWQRGTGTV 212
Query: 486 INRPLNPTFLDQV------SPFPSFIGRREL-SPPGMYSNFGPSFHKFDAVGGPPPPGSF 538
+ NP Q S + + GR + SP M + G F GG P F
Sbjct: 213 L---YNPVVRTQAGSGSLGSNYNNGGGRSDYGSPRVMRTGNGADFSN----GGVRP---F 262
Query: 539 HPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRS 598
D A G P H D G + + +P
Sbjct: 263 SRRSDSDAASR-----GPPTH----------------------DENGEEIQTQNISIPAD 295
Query: 599 LVPIIQGEDGACLKQIRQISDAKITITD-PKPGATETVIIISGTPEQTHAAQSLIQAFVM 657
+V I G G+ + +IR+ S A+I+I P E + I GT + +A L+ +
Sbjct: 296 MVGCIIGRAGSKISEIRKTSGARISIAKAPHDETGERMFTIMGTAKANESALFLLYENLE 355
Query: 658 SE 659
+E
Sbjct: 356 AE 357
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 103/247 (41%), Gaps = 25/247 (10%)
Query: 152 ETSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQ 211
E + +A +V ++E P + + + ++LL+ Q+G ++G+ G IK
Sbjct: 99 ECDAISRAYAIVARALLEGAPAMGMGGIVQSNGT-HPIKLLISHNQMGTIIGRQGLKIKH 157
Query: 212 IDKLPTCAL---------ASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPT 262
I + + +++ +V++ G D +++A+ I L+D+ R ++ NP
Sbjct: 158 IQDVSGVRMVAQKEMLPQSTERIVEVQGTPDGIQRAVWEICKCLVDDWQRGTGTVLYNPV 217
Query: 263 ----GPSHPLPDH-----SVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPS 313
S L + S G+P + AD + +S R P+
Sbjct: 218 VRTQAGSGSLGSNYNNGGGRSDYGSPRVMRTGNGADFSNGGVRPFSRRSDSDAASRGPPT 277
Query: 314 -----PEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA-VSGTEDRLIVIS 367
EI T + + VG +IG+ G+ I +++ +G I + +A T +R+ I
Sbjct: 278 HDENGEEIQTQNISIPADMVGCIIGRAGSKISEIRKTSGARISIAKAPHDETGERMFTIM 337
Query: 368 GPAHPDD 374
G A ++
Sbjct: 338 GTAKANE 344
>gi|321455006|gb|EFX66153.1| hypothetical protein DAPPUDRAFT_2216 [Daphnia pulex]
Length = 388
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 148/318 (46%), Gaps = 38/318 (11%)
Query: 175 EVADQE--NTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI-----DKLPTCALAS----- 222
EV QE NT + L++L + +G ++GKGG IK++ K+ +L
Sbjct: 77 EVMQQEADNTNKGEISLKILAHNNLIGRIIGKGGSTIKRVMLETETKITVSSLNDVSSFN 136
Query: 223 -DEVVQITGEVDTVRKALKLISHQLLDNSPRDHESI-PGNPTGPS-HPLPDHSVSSQG-A 278
+ V+ I G +D + +A +IS +L + D +++ P + P HP+ S G +
Sbjct: 137 MERVITIKGTIDNMSRAEGMISAKLRQSYESDLQAMAPQSMMFPGLHPMAMMSTVGMGFS 196
Query: 279 PYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAI 338
P G A + PP + ++G P+ T L + VG +IG G+
Sbjct: 197 PSVRGTPPAAAPGM-YPPGAAPYAQAG------PAGVGETSFLYIPNSAVGAIIGTRGSH 249
Query: 339 IRSLKQETGCDIKVMEAVSGT-----EDRLIVISGPAHPDDRISAPQDAVLRVQTRIARA 393
IR++ + +G +K+ GT +R + I G P+ + A ++ + R
Sbjct: 250 IRNIIRFSGASVKITSLPEGTTAEPQAERKVTIVGT--PEAQWKA--QYLIFEKMREEGF 305
Query: 394 IPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEV 453
+P + + LLVAS+Q+G ++GKGG + EM++ + + I++ + AS EE
Sbjct: 306 MPAGEDVRLTVELLVASSQVGRIIGKGGQNVREMQRTTSSVIKLP-----EQGASTGEET 360
Query: 454 VL-INGEFEAVQEALFQI 470
+ I G F AVQ A +I
Sbjct: 361 TVHIIGNFFAVQSAQRRI 378
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 139/343 (40%), Gaps = 68/343 (19%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRIS 377
R+L E VG +IG+ G IR + Q+T + V + G+ ++ I I G +P++
Sbjct: 13 LRVLVASEMVGAIIGRQGGTIRQITQQTRARVDVHRKENVGSLEKAITIYG--NPEN--- 67
Query: 378 APQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRI 437
+A RV + + + + + ++L +N IG ++GKGGS I + + I +
Sbjct: 68 -CTNACRRVLEVMQQEADNTNKGEISLKILAHNNLIGRIIGKGGSTIKRVMLETETKITV 126
Query: 438 LGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQ 497
+ + + E V+ I G + + A I+ +LR + D + + P Q
Sbjct: 127 SSLNDV--SSFNMERVITIKGTIDNMSRAEGMISAKLRQSYESDL-----QAMAP----Q 175
Query: 498 VSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMP 557
FP L P M S G F +V G PP + PGM
Sbjct: 176 SMMFPG------LHPMAMMSTVGMGFS--PSVRGTPPAAA----------------PGMY 211
Query: 558 PHMPDMKPW---GPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQI 614
P P P+ GP G+ E F + +P S V I G G+ ++ I
Sbjct: 212 P--PGAAPYAQAGPAGVGET-------SF---------LYIPNSAVGAIIGTRGSHIRNI 253
Query: 615 RQISDAKITITDPKPGAT-----ETVIIISGTPEQTHAAQSLI 652
+ S A + IT G T E + I GTPE AQ LI
Sbjct: 254 IRFSGASVKITSLPEGTTAEPQAERKVTIVGTPEAQWKAQYLI 296
>gi|147832545|emb|CAN68300.1| hypothetical protein VITISV_009906 [Vitis vinifera]
Length = 408
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 50/73 (68%)
Query: 402 VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFE 461
V RLLV SNQIGC++GKGG II +R SGA IRIL D +P C+ + E++ I+ E
Sbjct: 283 VTVRLLVPSNQIGCVIGKGGQIIQSIRSESGAQIRILKDDHLPSCSLSSNELIQISREPF 342
Query: 462 AVQEALFQITTRL 474
V++ L+QI +RL
Sbjct: 343 IVRKILYQIASRL 355
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 67/114 (58%), Gaps = 14/114 (12%)
Query: 166 RMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI------------- 212
R++ ++ EV +++ ++++ +RLLV S Q+GC++GKGG +I+ I
Sbjct: 262 RVIIMDYPEEVHGEDSEEANQVTVRLLVPSNQIGCVIGKGGQIIQSIRSESGAQIRILKD 321
Query: 213 DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRD-HESIPGNPTGPS 265
D LP+C+L+S+E++QI+ E VRK L I+ +L DN R H + P G S
Sbjct: 322 DHLPSCSLSSNELIQISREPFIVRKILYQIASRLHDNPSRSQHLFVYVVPIGYS 375
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 64/122 (52%), Gaps = 9/122 (7%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
+T RLL ++G VIGKGG II+S++ E+G I++++ +D L S ++ +I
Sbjct: 283 VTVRLLVPSNQIGCVIGKGGQIIQSIRSESGAQIRILK-----DDHLPSCSLSSNELIQI 337
Query: 377 SAPQDAVLRVQTRIARAIPDN--REQTVMTRLL-VASNQIGCLLG-KGGSIIAEMRKLSG 432
S V ++ +IA + DN R Q + ++ + + G L+G G+ I + L G
Sbjct: 338 SREPFIVRKILYQIASRLHDNPSRSQHLFVYVVPIGYSSSGSLMGLTSGAPIIGLAPLVG 397
Query: 433 AY 434
Y
Sbjct: 398 TY 399
>gi|340522569|gb|EGR52802.1| predicted protein [Trichoderma reesei QM6a]
Length = 369
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 144/360 (40%), Gaps = 65/360 (18%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT R + + G +IGKGG + L+ ETG V + V G DR++ I+G
Sbjct: 47 LTLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTITGGC------ 100
Query: 377 SAPQDAVLRVQTRIARAIPDNREQTVM-----------TRLLVASNQIGCLLGKGGSIIA 425
DA+ R +ARA+ + M +LL++ NQ+G ++G+ G I
Sbjct: 101 ----DAISRAYAIVARALLEGAPVVGMGGVVQNNGTHPIKLLISHNQMGTIIGRQGLKIK 156
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPS 485
++ +SG + + KD +P+ E +V + G E +Q A+++I+ L + R
Sbjct: 157 HIQDVSGVRM-VAQKDMLPQS---TERIVEVQGTPEGIQRAIWEISKCLVDDWQRGTGTV 212
Query: 486 INRPLNPT-----FLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHP 540
+ P+ T S + + GR SP M + G F GG P F
Sbjct: 213 LYNPVVRTQSSGSGSLGGSGYGNGSGRDYGSPRVMRTGNGADFSN----GGSRP---FSR 265
Query: 541 HDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLV 600
D A G P H D G + + +P +V
Sbjct: 266 RSDSDAATR-----GPPTH----------------------DENGEEIQTQNISIPADMV 298
Query: 601 PIIQGEDGACLKQIRQISDAKITITD-PKPGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
I G G+ + IR+ S A+I+I P E + I GT + +A L+ + +E
Sbjct: 299 GCIIGRGGSKISDIRKTSGARISIAKAPHDETGERMFTIMGTAKANESALFLLYENLEAE 358
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 91/211 (43%), Gaps = 25/211 (11%)
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQIDKLPTCAL---------ASDEVVQITGEVDTVRKAL 239
++LL+ Q+G ++G+ G IK I + + +++ +V++ G + +++A+
Sbjct: 135 IKLLISHNQMGTIIGRQGLKIKHIQDVSGVRMVAQKDMLPQSTERIVEVQGTPEGIQRAI 194
Query: 240 KLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQ----------GAPYATGHRDVAD 289
IS L+D+ R ++ NP + S+ G+P + AD
Sbjct: 195 WEISKCLVDDWQRGTGTVLYNPVVRTQSSGSGSLGGSGYGNGSGRDYGSPRVMRTGNGAD 254
Query: 290 IHLPMPPSIPKFHESGVLDRPKPS-----PEILTFRLLCHDERVGGVIGKGGAIIRSLKQ 344
+ +S R P+ EI T + + VG +IG+GG+ I +++
Sbjct: 255 FSNGGSRPFSRRSDSDAATRGPPTHDENGEEIQTQNISIPADMVGCIIGRGGSKISDIRK 314
Query: 345 ETGCDIKVMEA-VSGTEDRLIVISGPAHPDD 374
+G I + +A T +R+ I G A ++
Sbjct: 315 TSGARISIAKAPHDETGERMFTIMGTAKANE 345
>gi|383862495|ref|XP_003706719.1| PREDICTED: poly(rC)-binding protein 4-like isoform 2 [Megachile
rotundata]
Length = 560
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 85/167 (50%), Gaps = 29/167 (17%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RL+ + VG +IGK G I++ ++E+G I + + +R++ ++GP
Sbjct: 18 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTVTGPT------ 69
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT-------------VMTRLLVASNQIGCLLGKGGSI 423
+++ + T I + + Q + RL+V ++Q G L+GKGGS
Sbjct: 70 ----NSIFKAFTLICKKFEEWCSQFHDIQSGGGVPRPPITLRLIVPASQCGSLIGKGGSK 125
Query: 424 IAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
I E+R+++GA I++ + +P + E V I+G EA+ + ++ I
Sbjct: 126 IKEIREVTGASIQV-ASEMLP---NSTERAVTISGTSEAITQCIYHI 168
Score = 46.2 bits (108), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 6/79 (7%)
Query: 397 NREQTVMTR----LLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEE 452
NR+Q + V + IGC++GKGG+ IAE+R++SGA IRI ++ + +
Sbjct: 357 NRQQPAANNQTHEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGATDR 414
Query: 453 VVLINGEFEAVQEALFQIT 471
+ I G +AV A + I+
Sbjct: 415 TITITGNPDAVALAQYLIS 433
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 593 VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKP---GATETVIIISGTPEQTHAAQ 649
+ VP L+ I G+ G + +IRQIS A I I++ + GAT+ I I+G P+ AQ
Sbjct: 370 MTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVALAQ 429
Query: 650 SLIQAFV 656
LI V
Sbjct: 430 YLISMSV 436
Score = 38.9 bits (89), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 56/117 (47%), Gaps = 14/117 (11%)
Query: 187 FVLRLLVLSTQVGCLLGKGGCVIKQIDKLPTCAL---------ASDEVVQITGEVDTVRK 237
LRL+V ++Q G L+GKGG IK+I ++ ++ +++ V I+G + + +
Sbjct: 104 ITLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASEMLPNSTERAVTISGTSEAITQ 163
Query: 238 ALKLISHQLLDNSPRDHESIPGNPT----GPSHPLPDHSVSSQGAPYATGHRDVADI 290
+ I +L++ P+ +IP P GP + + QG H DV+ +
Sbjct: 164 CIYHICCVMLESPPKG-ATIPYRPKPQVGGPLILAGGQAYTIQGNYAVPAHSDVSTV 219
>gi|410899813|ref|XP_003963391.1| PREDICTED: poly(rC)-binding protein 4-like [Takifugu rubripes]
Length = 447
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 149/363 (41%), Gaps = 55/363 (15%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+ + + E +R+I I+G
Sbjct: 16 LTLRLLMHGKEVGSIIGKKGETVKRIREESSARVNISEG--SCPERIITITGST------ 67
Query: 377 SAPQDAVLRVQTRIARAIPDNREQTVMT-----------RLLVASNQIGCLLGKGGSIIA 425
D V R T I + ++ V RL++ ++Q G L+GKGG+ I
Sbjct: 68 ----DCVFRAFTMITHKLEEDLAALVANGTISTKPPVTLRLVIPASQCGSLIGKGGAKIK 123
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPS 485
E+R+ +GA I++ G D +P + E V I+G Q+++ Q +
Sbjct: 124 EIRESTGAQIQVAG-DLLP---NSTERGVTISGN----QDSVIQCVKLICTVILESPPKG 175
Query: 486 INRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHS 545
P P+ SP I +L S F A GG ++ + +
Sbjct: 176 ATIPYRPS----PSPAAVLIAGNQLFDA---SEFATHPMYSVAQGGLDLQQAYTLQNQYG 228
Query: 546 ---AFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVG---PPHRRVPVVVPRSL 599
+ + +H+ M QGL + P G +++P L
Sbjct: 229 IPHSELAKLHQLSMQ-----------QGLNPIAQPASTVIPAGMDSNSQTSQELLIPNDL 277
Query: 600 VPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
+ I G G + +IRQ+S A+I I G ++ + I+GTP + AQ LI + + +
Sbjct: 278 IGSIIGRQGTKINEIRQVSGAQIKIGSQLDGTSDRHVTITGTPVSINLAQYLITSCLETA 337
Query: 660 TET 662
T
Sbjct: 338 KST 340
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 123/274 (44%), Gaps = 46/274 (16%)
Query: 136 SVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLS 195
+++EGS + T V +A ++ ++ E + VA+ + LRL++ +
Sbjct: 50 NISEGSCPERIITITGSTDCVFRAFTMITHKLEE-DLAALVANGTISTKPPVTLRLVIPA 108
Query: 196 TQVGCLLGKGGCVIKQI------------DKLPTCALASDEVVQITGEVDTVRKALKLIS 243
+Q G L+GKGG IK+I D LP +++ V I+G D+V + +KLI
Sbjct: 109 SQCGSLIGKGGAKIKEIRESTGAQIQVAGDLLPN---STERGVTISGNQDSVIQCVKLIC 165
Query: 244 HQLLDNSPRDHESIPGNPT-GPSHPL---------------PDHSVSSQGA--------- 278
+L++ P+ +IP P+ P+ L P +SV+ G
Sbjct: 166 TVILESPPKG-ATIPYRPSPSPAAVLIAGNQLFDASEFATHPMYSVAQGGLDLQQAYTLQ 224
Query: 279 -PYATGHRDVADIH-LPMPPSIPKFHE--SGVLDRPKPSPEILTFRLLCHDERVGGVIGK 334
Y H ++A +H L M + + S V+ S + LL ++ +G +IG+
Sbjct: 225 NQYGIPHSELAKLHQLSMQQGLNPIAQPASTVIPAGMDSNSQTSQELLIPNDLIGSIIGR 284
Query: 335 GGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
G I ++Q +G IK+ + GT DR + I+G
Sbjct: 285 QGTKINEIRQVSGAQIKIGSQLDGTSDRHVTITG 318
>gi|328778258|ref|XP_391921.3| PREDICTED: poly(rC)-binding protein 3-like [Apis mellifera]
Length = 466
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 85/167 (50%), Gaps = 29/167 (17%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RL+ + VG +IGK G I++ ++E+G I + + +R++ ++GP
Sbjct: 18 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTVTGPT------ 69
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT-------------VMTRLLVASNQIGCLLGKGGSI 423
+++ + T I + + Q + RL+V ++Q G L+GKGGS
Sbjct: 70 ----NSIFKAFTLICKKFEEWCSQFHDIQGSGGVPRPPITLRLIVPASQCGSLIGKGGSK 125
Query: 424 IAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
I E+R+++GA I++ D +P + E V I+G EA+ + ++ I
Sbjct: 126 IKEIREVTGASIQV-ASDMLP---NSTERAVTISGTSEAITQCIYHI 168
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Query: 392 RAIPDNREQTVMTR----LLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCA 447
R NR+Q + V + IGC++GKGG+ IAE+R++SGA IRI ++ +
Sbjct: 258 RTSNTNRQQPAANNQTHEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REG 315
Query: 448 SENEEVVLINGEFEAVQEALFQIT 471
+ + I G +AV A + I+
Sbjct: 316 GATDRTITITGNPDAVSLAQYLIS 339
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 593 VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKP---GATETVIIISGTPEQTHAAQ 649
+ VP L+ I G+ G + +IRQIS A I I++ + GAT+ I I+G P+ AQ
Sbjct: 276 MTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVSLAQ 335
Query: 650 SLIQAFV 656
LI V
Sbjct: 336 YLISMSV 342
>gi|85109816|ref|XP_963102.1| hypothetical protein NCU06251 [Neurospora crassa OR74A]
gi|28924753|gb|EAA33866.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 371
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 146/360 (40%), Gaps = 68/360 (18%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT R + + G +IGKGG + +L+ ETG V + V G DR++ I+G
Sbjct: 50 LTLRAIVSSKEAGVIIGKGGQNVANLRDETGVKAGVSKVVQGVHDRVLTITGGC------ 103
Query: 377 SAPQDAVLRVQTRIARAIPDNREQTVM-----------TRLLVASNQIGCLLGKGGSIIA 425
DAV + +AR++ + M +LL++ NQ+G ++G+ G I
Sbjct: 104 ----DAVSKAYAVVARSLLEGAPSVGMGGVISANGTHPIKLLISHNQMGTVIGRQGLKIK 159
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPS 485
++ +SG + + K+ +P+ E VV + G E +Q A+++I L + R
Sbjct: 160 HIQDVSGVRM-VAQKEMLPQS---TERVVEVQGTPEGIQRAVWEICKCLVDDWQRGTGTV 215
Query: 486 INRPL-----NPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHP 540
+ P+ P D+ P G ++ G ++F + GG P ++
Sbjct: 216 LYNPVVRGGGQPLGGDRNYPQERSYGSSRVTRTGNGADFSSNS------GGRP----YNR 265
Query: 541 HDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLV 600
D A G P H D G + + +P +V
Sbjct: 266 RSDSDAASR-----GPPTH----------------------DENGEEIQTQNISIPADMV 298
Query: 601 PIIQGEDGACLKQIRQISDAKITITD-PKPGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
I G G+ + +IR+ S A+I+I P + E + I G+ + A L+ + +E
Sbjct: 299 GCIIGRQGSKISEIRKASGARISIAKGPHDESGERMFTIMGSAKANETALYLLYENLEAE 358
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 105/256 (41%), Gaps = 53/256 (20%)
Query: 156 VQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKL 215
V KA +V ++E P + + + ++LL+ Q+G ++G+ G IK I +
Sbjct: 106 VSKAYAVVARSLLEGAPSVGMGGVISANGT-HPIKLLISHNQMGTVIGRQGLKIKHIQDV 164
Query: 216 PTCAL---------ASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPT--GP 264
+ +++ VV++ G + +++A+ I L+D+ R ++ NP G
Sbjct: 165 SGVRMVAQKEMLPQSTERVVEVQGTPEGIQRAVWEICKCLVDDWQRGTGTVLYNPVVRGG 224
Query: 265 SHPL-----------------------PDHSVSSQGAPYATGHRDVADIHLPMPPSIPKF 301
PL D S +S G PY R +D PP+
Sbjct: 225 GQPLGGDRNYPQERSYGSSRVTRTGNGADFSSNSGGRPY--NRRSDSDAASRGPPT---H 279
Query: 302 HESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA---VSG 358
E+G EI T + + VG +IG+ G+ I +++ +G I + + SG
Sbjct: 280 DENG--------EEIQTQNISIPADMVGCIIGRQGSKISEIRKASGARISIAKGPHDESG 331
Query: 359 TEDRLIVISGPAHPDD 374
+R+ I G A ++
Sbjct: 332 --ERMFTIMGSAKANE 345
>gi|225543383|ref|NP_076159.3| insulin-like growth factor 2 mRNA-binding protein 3 [Mus musculus]
gi|81916748|sp|Q9CPN8.1|IF2B3_MOUSE RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 3;
Short=IGF2 mRNA-binding protein 3; Short=IMP-3;
Short=mIMP-3; AltName: Full=IGF-II mRNA-binding protein
3; AltName: Full=VICKZ family member 3
gi|11933384|dbj|BAB19755.1| igf2 mRNA-binding protein 3 [Mus musculus]
gi|12847973|dbj|BAB27779.1| unnamed protein product [Mus musculus]
gi|28175449|gb|AAH45138.1| Insulin-like growth factor 2 mRNA binding protein 3 [Mus musculus]
gi|29145081|gb|AAH49082.1| Insulin-like growth factor 2 mRNA binding protein 3 [Mus musculus]
gi|148666183|gb|EDK98599.1| insulin-like growth factor 2 mRNA binding protein 3, isoform CRA_b
[Mus musculus]
Length = 579
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 110/471 (23%), Positives = 192/471 (40%), Gaps = 112/471 (23%)
Query: 39 SKSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEAS 98
SK P + R+L P + +IGK+G + I++ T I
Sbjct: 189 SKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKI------------------- 229
Query: 99 DNKKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQK 158
+ R EN G E S+ L++ + TS K
Sbjct: 230 ------------DVHRKENTGAAEKSITI-------------------LSTPEGTSAACK 258
Query: 159 ALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDK---- 214
++L + + E D + T+ + L++L + VG L+GK G +K+I++
Sbjct: 259 SILEIMHK--------EAQDIKFTE--EIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDT 308
Query: 215 ------LPTCALASDE-VVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHP 267
L L + E + + G V+T KA + I ++ ++ D S+ +H
Sbjct: 309 KITISPLQELTLYNPERTITVKGSVETCAKAEEEIMKKIRESYENDIASM----NLQAHL 364
Query: 268 LPDHSVSSQGA--PYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHD 325
+P ++++ G P + + + P P+F +S E T L
Sbjct: 365 IPGLNLNALGLFPPTSGMPPPTSGPPSTLTPPYPQFEQS----------ETETVHLFIPA 414
Query: 326 ERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRISAPQDAVL 384
VG +IGK G I+ L + G IK+ A + + R+++I+GP +A
Sbjct: 415 LSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPP----------EAQF 464
Query: 385 RVQTRIARAIPD------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRIL 438
+ Q RI I + E + + V S G ++GKGG + E++ LS A + ++
Sbjct: 465 KAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQSLSSAEV-VV 523
Query: 439 GKDQIPKCASENEEVVL-INGEFEAVQEA---LFQITTRLRHHFFRDAFPS 485
+DQ P EN++VV+ I G F A Q A + +I T+++ H + A S
Sbjct: 524 PRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVKQHQQQKALQS 571
>gi|350405177|ref|XP_003487350.1| PREDICTED: poly(rC)-binding protein 3-like [Bombus impatiens]
Length = 466
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 85/167 (50%), Gaps = 29/167 (17%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RL+ + VG +IGK G I++ ++E+G I + + +R++ ++GP
Sbjct: 18 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTVTGPT------ 69
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT-------------VMTRLLVASNQIGCLLGKGGSI 423
+++ + T I + + Q + RL+V ++Q G L+GKGGS
Sbjct: 70 ----NSIFKAFTLICKKFEEWCSQFHDIQGSGGVPRPPITLRLIVPASQCGSLIGKGGSK 125
Query: 424 IAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
I E+R+++GA I++ D +P + E V I+G EA+ + ++ I
Sbjct: 126 IKEIREVTGASIQV-ASDMLP---NSTERAVTISGTSEAITQCIYHI 168
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Query: 392 RAIPDNREQTVMTR----LLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCA 447
R NR+Q + V + IGC++GKGG+ IAE+R++SGA IRI ++ +
Sbjct: 258 RTSNTNRQQPAANNQTHEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REG 315
Query: 448 SENEEVVLINGEFEAVQEALFQIT 471
+ + I G +AV A + I+
Sbjct: 316 GATDRTITITGNPDAVALAQYLIS 339
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 593 VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKP---GATETVIIISGTPEQTHAAQ 649
+ VP L+ I G+ G + +IRQIS A I I++ + GAT+ I I+G P+ AQ
Sbjct: 276 MTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVALAQ 335
Query: 650 SLIQAFV 656
LI V
Sbjct: 336 YLISMSV 342
>gi|209151855|gb|ACI33086.1| Heterogeneous nuclear ribonucleoprotein K [Salmo salar]
Length = 433
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 99/424 (23%), Positives = 160/424 (37%), Gaps = 94/424 (22%)
Query: 301 FHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTE 360
E R + + E++ R+L + G VIGKGG I++L+ + + V ++ SG E
Sbjct: 28 MEEEQAFKRSRNTDEMVELRVLLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDS-SGPE 86
Query: 361 DRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMT-----RLLVASNQIGC 415
L V SA D + + +I + + + + RLL+ + G
Sbjct: 87 RILSV-----------SADIDTIGEILLKIIPTLEEYQHYNGIDFDCELRLLIHQSLAGG 135
Query: 416 LLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLR 475
++G G+ I E+R+ + I++ + C + VVL+ G+ + V E + I +
Sbjct: 136 IIGVKGAKIKELRENTQTTIKLFQE----CCPQSTDRVVLVGGKPDRVVECIKVILDLVS 191
Query: 476 HHFFRDAFPSINRPLNPTFLDQVSPFPSFI------GRRELSPPGMYSNFGPSFHKF-DA 528
+P +P F D+ + F GRR + M G F +
Sbjct: 192 EA----PIKGRAQPYDPNFYDETYDYGGFTMIYEERGRRPMGGFPMRGRGG--FERMPPG 245
Query: 529 VGGPPPPGSFHPHDDHSA------------------------------------FMHHIH 552
GG P P S +DD S F H +
Sbjct: 246 RGGRPMPPSRRDYDDMSPRRGPPPPLPGRGGRGGSRARNLPLPPPPPPRGGGDRFSHQSY 305
Query: 553 -----------RPGMP---------PHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVP 592
R G P + + W P + GG + D +G P
Sbjct: 306 HGNMDDRPNSDRRGRPGDRYNSMSGGYGDNNSSWEP---FQSGGRGSYSD-IGGPVITTQ 361
Query: 593 VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLI 652
V +P+ L I G+ G +KQIR S A I I +P G+ + +I I+GT +Q AQ L+
Sbjct: 362 VTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITINGTQDQIQNAQYLL 421
Query: 653 QAFV 656
Q V
Sbjct: 422 QNSV 425
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 56/111 (50%), Gaps = 15/111 (13%)
Query: 13 DDDNHTEPNGK--EKSQKLAGDYSENQPSKS-FPGG------------IMFRVLCPVSKI 57
DD +++ G+ ++ ++G Y +N S F G I +V P
Sbjct: 310 DDRPNSDRRGRPGDRYNSMSGGYGDNNSSWEPFQSGGRGSYSDIGGPVITTQVTIPKDLA 369
Query: 58 DGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENL 108
+IGK G+ + QI ++G +I+++E + GS++R++ I + ++ + ++ L
Sbjct: 370 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITINGTQDQIQNAQYL 420
>gi|342880804|gb|EGU81822.1| hypothetical protein FOXB_07617 [Fusarium oxysporum Fo5176]
Length = 372
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 85/363 (23%), Positives = 144/363 (39%), Gaps = 68/363 (18%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT R + + G +IGKGG + L+ ETG V + V G DR++ I+G
Sbjct: 47 LTLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTITGGC------ 100
Query: 377 SAPQDAVLRVQTRIARAIPDNREQTVM-----------TRLLVASNQIGCLLGKGGSIIA 425
DA+ R +ARA+ + M +LL++ NQ+G ++G+ G I
Sbjct: 101 ----DAISRAYAIVARALLEGAPAMGMGGVVQSNGTHPIKLLISHNQMGTIIGRQGLKIK 156
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPS 485
++ SG + + K+ +P+ E +V + G E +Q A+++I L + R
Sbjct: 157 HIQDASGVRM-VAQKEMLPQS---TERIVEVQGTPEGIQRAIWEICKCLVDDWQRGTGTV 212
Query: 486 INRPLNPT------FLDQVSPFPSFIGRREL--SPPGMYSNFGPSFHKFDAVGGPPPPGS 537
+ P+ T + F GR + SP M + G F G+
Sbjct: 213 LYNPVVRTQPSGSGNASGGAGFSQGSGRSDYGGSPRVMRTGNGADFSN----------GN 262
Query: 538 FHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPR 597
P++ S + P P H D G + + +P
Sbjct: 263 SRPYNRRSDSDAALRGP--PTH----------------------DENGEEIQTQNISIPA 298
Query: 598 SLVPIIQGEDGACLKQIRQISDAKITITD-PKPGATETVIIISGTPEQTHAAQSLIQAFV 656
+V I G G+ + +IR+ S A+I+I P E + I GT + +A L+ +
Sbjct: 299 DMVGCIIGRAGSKISEIRKTSGARISIAKAPHDETGERMFTIMGTAKANESALFLLYENL 358
Query: 657 MSE 659
+E
Sbjct: 359 EAE 361
>gi|397493518|ref|XP_003817651.1| PREDICTED: RNA-binding protein Nova-2 [Pan paniscus]
Length = 349
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 154/367 (41%), Gaps = 63/367 (17%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA---VSGTEDRLIVISGPAHPDDR 375
++L G +IGKGG I L++ETG IK+ ++ GT +R+ ++ G A +
Sbjct: 8 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 67
Query: 376 ISA---------PQDA-------VLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGK 419
+ + PQ +L+ QT + PD +Q +L+V ++ G ++GK
Sbjct: 68 VHSFIAEKVREIPQAMTKPEVVNILQPQTTMN---PDRAKQA---KLIVPNSTAGLIIGK 121
Query: 420 GGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFF 479
GG+ + + + SGA++++ Q P+ + E VV ++GE E V +A+ I +++
Sbjct: 122 GGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQED-- 176
Query: 480 RDAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFH 539
P + LN ++ + P +N P+ + + P
Sbjct: 177 ----PQSSSCLNISYANVAGPV---------------ANSNPTGSPYAS------PADVL 211
Query: 540 PHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPD----FVGPPHRRVPVVV 595
P ++ G P + + + G GF V + V
Sbjct: 212 PAAAAASAAAASGLLG-PAGLAGVGAFPAXXXXXAGAAGGFLTAEKLAAESAKELVEIAV 270
Query: 596 PRSLVPIIQGEDGACLKQIRQISDAKITITDPK---PGATETVIIISGTPEQTHAAQSLI 652
P +LV I G+ G L + ++++ A+I I+ PG + I+G+P T AAQ LI
Sbjct: 271 PENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQYLI 330
Query: 653 QAFVMSE 659
V E
Sbjct: 331 SQRVTYE 337
Score = 39.3 bits (90), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 90/215 (41%), Gaps = 39/215 (18%)
Query: 190 RLLVLSTQVGCLLGKGGCVIK----------QIDKLPTCALASDEVVQITGEVDTVRKAL 239
+L+V ++ G ++GKGG +K Q+ + P + VV ++GE + V KA+
Sbjct: 107 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAV 166
Query: 240 KLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYAT----------------- 282
I ++ ++ P+ + + + P+ + + + G+PYA+
Sbjct: 167 SAIVQKVQED-PQSSSCLNISYANVAGPVANSNPT--GSPYASPADVLPAAAAASAAAAS 223
Query: 283 ---GHRDVADI-HLPMPPSIPKFHESGVLDRPKPSPEILT--FRLLCHDERVGGVIGKGG 336
G +A + P G L K + E + + VG ++GKGG
Sbjct: 224 GLLGPAGLAGVGAFPAXXXXXAGAAGGFLTAEKLAAESAKELVEIAVPENLVGAILGKGG 283
Query: 337 AIIRSLKQETGCDIKVM---EAVSGTEDRLIVISG 368
+ ++ TG I++ E + GT +R + I+G
Sbjct: 284 KTLVEYQELTGARIQISKKGEFLPGTRNRRVTITG 318
>gi|340726176|ref|XP_003401437.1| PREDICTED: poly(rC)-binding protein 3-like [Bombus terrestris]
Length = 466
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 85/167 (50%), Gaps = 29/167 (17%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RL+ + VG +IGK G I++ ++E+G I + + +R++ ++GP
Sbjct: 18 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTVTGPT------ 69
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT-------------VMTRLLVASNQIGCLLGKGGSI 423
+++ + T I + + Q + RL+V ++Q G L+GKGGS
Sbjct: 70 ----NSIFKAFTLICKKFEEWCSQFHDIQGSGGVPRPPITLRLIVPASQCGSLIGKGGSK 125
Query: 424 IAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
I E+R+++GA I++ D +P + E V I+G EA+ + ++ I
Sbjct: 126 IKEIREVTGASIQV-ASDMLP---NSTERAVTISGTSEAITQCIYHI 168
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 406 LLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQE 465
+ V + IGC++GKGG+ IAE+R++SGA IRI ++ + + + I G +AV
Sbjct: 276 MTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGATDRTITITGNPDAVAL 333
Query: 466 ALFQIT 471
A + I+
Sbjct: 334 AQYLIS 339
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 593 VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKP---GATETVIIISGTPEQTHAAQ 649
+ VP L+ I G+ G + +IRQIS A I I++ + GAT+ I I+G P+ AQ
Sbjct: 276 MTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVALAQ 335
Query: 650 SLIQAFV 656
LI V
Sbjct: 336 YLISMSV 342
>gi|336469496|gb|EGO57658.1| hypothetical protein NEUTE1DRAFT_116898 [Neurospora tetrasperma
FGSC 2508]
gi|350290860|gb|EGZ72074.1| hypothetical protein NEUTE2DRAFT_144709 [Neurospora tetrasperma
FGSC 2509]
Length = 371
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 145/360 (40%), Gaps = 68/360 (18%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT R + + G +IGKGG + +L+ ETG V + V G DR++ I+G
Sbjct: 50 LTLRAIVSSKEAGVIIGKGGQNVANLRDETGVKAGVSKVVQGVHDRVLTITGGC------ 103
Query: 377 SAPQDAVLRVQTRIARAIPDNREQTVM-----------TRLLVASNQIGCLLGKGGSIIA 425
DAV + +AR++ + M +LL++ NQ+G ++G+ G I
Sbjct: 104 ----DAVSKAYAVVARSLLEGAPSVGMGGVISANGTHPIKLLISHNQMGTVIGRQGLKIK 159
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPS 485
++ +SG + + K+ +P+ E VV + G E +Q A+++I L + R
Sbjct: 160 HIQDVSGVRM-VAQKEMLPQS---TERVVEVQGTPEGIQRAVWEICKCLVDDWQRGTGTV 215
Query: 486 INRPL-----NPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHP 540
+ P+ P D+ P G ++ G ++F + GG P ++
Sbjct: 216 LYNPVVRGGGQPLGGDRNYPQERSYGSSRVTRTGNGADFSSNS------GGRP----YNR 265
Query: 541 HDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLV 600
D A G P H D G + + +P +V
Sbjct: 266 RSDSDAASR-----GPPTH----------------------DENGEELQTQNISIPADMV 298
Query: 601 PIIQGEDGACLKQIRQISDAKITITD-PKPGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
I G G + +IR+ S A+I+I P + E + I G+ + A L+ + +E
Sbjct: 299 GCIIGRQGTKISEIRKASGARISIAKGPHDESGERMFTIMGSAKANETALYLLYENLEAE 358
Score = 39.3 bits (90), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 104/256 (40%), Gaps = 53/256 (20%)
Query: 156 VQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKL 215
V KA +V ++E P + + + ++LL+ Q+G ++G+ G IK I +
Sbjct: 106 VSKAYAVVARSLLEGAPSVGMGGVISANGT-HPIKLLISHNQMGTVIGRQGLKIKHIQDV 164
Query: 216 PTCAL---------ASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPT--GP 264
+ +++ VV++ G + +++A+ I L+D+ R ++ NP G
Sbjct: 165 SGVRMVAQKEMLPQSTERVVEVQGTPEGIQRAVWEICKCLVDDWQRGTGTVLYNPVVRGG 224
Query: 265 SHPL-----------------------PDHSVSSQGAPYATGHRDVADIHLPMPPSIPKF 301
PL D S +S G PY R +D PP+
Sbjct: 225 GQPLGGDRNYPQERSYGSSRVTRTGNGADFSSNSGGRPY--NRRSDSDAASRGPPT---H 279
Query: 302 HESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA---VSG 358
E+G E+ T + + VG +IG+ G I +++ +G I + + SG
Sbjct: 280 DENG--------EELQTQNISIPADMVGCIIGRQGTKISEIRKASGARISIAKGPHDESG 331
Query: 359 TEDRLIVISGPAHPDD 374
+R+ I G A ++
Sbjct: 332 --ERMFTIMGSAKANE 345
>gi|73976022|ref|XP_863341.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 3
isoform 7 [Canis lupus familiaris]
Length = 580
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 116/479 (24%), Positives = 190/479 (39%), Gaps = 127/479 (26%)
Query: 39 SKSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEAS 98
SK P + R+L P + +IGK+G + I++ T I V
Sbjct: 189 SKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVH---------------- 232
Query: 99 DNKKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQK 158
R EN G E S+ L++ + TS K
Sbjct: 233 ---------------RKENAGAAEKSITI-------------------LSTPEGTSAACK 258
Query: 159 ALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDK---- 214
++L + + E D + T+ + L++L + VG L+GK G +K+I++
Sbjct: 259 SILEIMHK--------EAQDIKFTE--EIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDT 308
Query: 215 ------LPTCALASDE-VVQITGEVDTVRKALKLISHQLLDNSPRDHES-------IPG- 259
L L + E + + G V+T KA + I ++ ++ D S IPG
Sbjct: 309 KITISPLQELTLYNPERTITVKGNVETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGL 368
Query: 260 --NPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEIL 317
N G P + G P A M P P+F ++ P+
Sbjct: 369 NLNALGLFPPTSGMPPPTSGPPSA------------MTPPYPQFEQA---------PQTE 407
Query: 318 TFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRI 376
T L VG +IGK G I+ L + G IK+ A + + R+++I+GP
Sbjct: 408 TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPP------ 461
Query: 377 SAPQDAVLRVQTRIARAIPD------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKL 430
+A + Q RI I + E + + V S G ++GKGG + E++ L
Sbjct: 462 ----EAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNL 517
Query: 431 SGAYIRILGKDQIPKCASENEEVVL-INGEFEAVQEA---LFQITTRLRHHFFRDAFPS 485
S A + ++ +DQ P EN++VV+ I G F A Q A + +I T+++ H + A S
Sbjct: 518 SSAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVKQHQQQKALQS 572
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 138/353 (39%), Gaps = 68/353 (19%)
Query: 311 KPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV--MEAVSGTEDRLIVISG 368
K P L RLL + VG +IGK GA IR++ ++T I V E E + ++S
Sbjct: 190 KQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILST 249
Query: 369 PAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMR 428
P + SA ++L + + A+ I E + ++L +N +G L+GK G + ++
Sbjct: 250 P----EGTSAACKSILEIMHKEAQDIKFTEE--IPLKILAHNNFVGRLIGKEGRNLKKIE 303
Query: 429 KLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINR 488
+ + I I ++ E + + G E +A +I ++R + D S+N
Sbjct: 304 QDTDTKITISPLQEL--TLYNPERTITVKGNVETCAKAEEEIMKKIRESYEND-IASMN- 359
Query: 489 PLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFM 548
L + PG+ N + F G PPP S P SA
Sbjct: 360 -LQAHLI-----------------PGLNLN---ALGLFPPTSGMPPPTSGPP----SAM- 393
Query: 549 HHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPH-RRVPVVVPRSLVPIIQGED 607
PP +P F P V + +P V I G+
Sbjct: 394 -------TPP---------------------YPQFEQAPQTETVHLFIPALSVGAIIGKQ 425
Query: 608 GACLKQIRQISDAKITITDPK-PGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
G +KQ+ + + A I I + P A ++II+G PE AQ I + E
Sbjct: 426 GQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFKAQGRIYGKIKEE 478
>gi|402086578|gb|EJT81476.1| Poly(rC)-binding protein 3 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 486
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 99/397 (24%), Positives = 156/397 (39%), Gaps = 94/397 (23%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
+ R + VIGKGG + ++Q +G V + G +R++ +SG
Sbjct: 126 IHIRAVISSPEAATVIGKGGENVSKIRQLSGAKCTVSDYQKGAVERILTVSGIV------ 179
Query: 377 SAPQDAVLRVQTRIARAIPDN--------REQTVMTRLLVASNQIGCLLGKGGSIIAEMR 428
DAV + I R + + +T RLL+ IG ++GKGG+ I E++
Sbjct: 180 ----DAVAKAFGLIIRTLNNEPLSDASSAHSKTYPLRLLIPHILIGSIIGKGGARIKEIQ 235
Query: 429 KLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINR 488
+ SGA R+ D +SE VV+ G +AV A + + + L D F
Sbjct: 236 EASGA--RLNASDSCLPLSSERSLVVM--GVADAVHIATYYVGSTLLEQL-NDRF---GG 287
Query: 489 PLNPTFLD-------------QVSPF-----PSFIGRRELSPPGMYSNFGPSFHKFDAVG 530
P + QV P+ G RE N+G + D
Sbjct: 288 PAASAYATRAGGPVGAVPGGMQVVPYLPQPAGGNFGNRE--------NYG---RRPDPRA 336
Query: 531 GPPPPGSFHPHDDH-SAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGF---PDFVG- 585
GP P G+ P+ H + H P +P H +G QG G G P VG
Sbjct: 337 GPVPQGAAVPYAQHYNPHAAHQPTPAVPVH------YGAQG-----GAYGAHVQPPHVGH 385
Query: 586 ------------PPHRRVP-----------VVVPRSLVPIIQGEDGACLKQIRQISDAKI 622
P H ++P + +P +V I G+ G + +IRQIS + I
Sbjct: 386 AGPQVHGAPHQQPMHSQMPGPGGAQSLTQQIYIPNDMVGAIIGKGGTKINEIRQISGSVI 445
Query: 623 TITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
I +P+ + E ++ I+GT E A ++ + + SE
Sbjct: 446 KINEPQDNSNERLVTITGTEECNRMALYMLYSRLESE 482
>gi|74151175|dbj|BAE27710.1| unnamed protein product [Mus musculus]
Length = 579
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 110/471 (23%), Positives = 192/471 (40%), Gaps = 112/471 (23%)
Query: 39 SKSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEAS 98
SK P + R+L P + +IGK+G + I++ T I
Sbjct: 189 SKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKI------------------- 229
Query: 99 DNKKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQK 158
+ R EN G E S+ L++ + TS K
Sbjct: 230 ------------DVHRKENTGAAEKSITI-------------------LSTPEGTSAACK 258
Query: 159 ALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDK---- 214
++L + + E D + T+ + L++L + VG L+GK G +K+I++
Sbjct: 259 SILEIMHK--------EAQDIKFTE--EIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDT 308
Query: 215 ------LPTCALASDE-VVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHP 267
L L + E + + G V+T KA + I ++ ++ D S+ +H
Sbjct: 309 KITISPLQELTLYNPERTITVKGSVETCAKAEEEIMKKIRESYENDIASM----NLQAHL 364
Query: 268 LPDHSVSSQGA--PYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHD 325
+P ++++ G P + + + P P+F +S E T L
Sbjct: 365 IPGLNLNALGLFPPTSGMPPPTSGPPSTLTPPYPQFEQS----------ETETVHLFIPA 414
Query: 326 ERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRISAPQDAVL 384
VG +IGK G I+ L + G IK+ A + + R+++I+GP +A
Sbjct: 415 LSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPP----------EAQF 464
Query: 385 RVQTRIARAIPD------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRIL 438
+ Q RI I + E + + V S G ++GKGG + E++ LS A + ++
Sbjct: 465 KAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQSLSSAEV-VV 523
Query: 439 GKDQIPKCASENEEVVL-INGEFEAVQEA---LFQITTRLRHHFFRDAFPS 485
+DQ P EN++VV+ I G F A Q A + +I T+++ H + A S
Sbjct: 524 PRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVKQHQQQKALQS 571
>gi|407917412|gb|EKG10721.1| K-like protein [Macrophomina phaseolina MS6]
Length = 488
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 90/378 (23%), Positives = 144/378 (38%), Gaps = 60/378 (15%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
L R + VIGKGG + +++ +G V + G +R++ +SG
Sbjct: 132 LHVRAIISSAEAATVIGKGGENVTQIRRMSGAKCTVSDYSRGAVERILTVSGLV------ 185
Query: 377 SAPQDAVLRVQTRIARAIPDN--------REQTVMTRLLVASNQIGCLLGKGGSIIAEMR 428
DAV + I R + + + +T RLL+ IG ++GK G I E++
Sbjct: 186 ----DAVAKAFGLIIRTLNNEDLNSPSTPQSKTYPLRLLIPHILIGSIIGKSGVRIREIQ 241
Query: 429 KLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRD------- 481
+ SGA R+ D ++E VVL G +AV A + + + L
Sbjct: 242 EASGA--RLNASDSCLPLSTERSLVVL--GVADAVHIATYYVGSTLVEQLTERFGGPAAS 297
Query: 482 --AFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFH 539
A S QV P+ + PP + GP + A G P +
Sbjct: 298 AYATRSGGPAGVVPGGMQVVPYVPQPAGGQWGPPDTFHRKGPQAQRTPAAGYGAPMHGQY 357
Query: 540 PHDDHSAFMHHIHRP-----GMPPHMPDM-------------KPWGPQGLMEVGGPMGFP 581
P + + P G PH P +P P M G PM
Sbjct: 358 PQQPQAPLHYGAGSPRHAYTGAGPHQPQQYGAPHVAQPSHAGQPAQPMQGMMPGQPMTQQ 417
Query: 582 DFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGT 641
F+ P +V I G+ GA + +IRQ+S + I I +P+ + E ++ I+GT
Sbjct: 418 IFI-----------PNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQDNSNERLVTITGT 466
Query: 642 PEQTHAAQSLIQAFVMSE 659
E A ++ + + SE
Sbjct: 467 QECNQMALYMLYSRLESE 484
>gi|294460692|gb|ADE75920.1| unknown [Picea sitchensis]
Length = 199
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 60/87 (68%), Gaps = 4/87 (4%)
Query: 579 GFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIII 638
GFP V V V +P++ V + G+ G+ ++ IR+IS AK+ + D + GA++ VI I
Sbjct: 108 GFPKNVSTT--TVEVTIPKNAVGSVLGKRGSNIQHIREISGAKVKLHDSESGASDRVIEI 165
Query: 639 SGTPEQTHAAQSLIQAFVMS--ETETT 663
SGTPEQTHAA+SL+QAF+ + +++TT
Sbjct: 166 SGTPEQTHAAKSLLQAFIATGGQSQTT 192
>gi|119614192|gb|EAW93786.1| insulin-like growth factor 2 mRNA binding protein 3, isoform CRA_a
[Homo sapiens]
Length = 422
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 116/479 (24%), Positives = 189/479 (39%), Gaps = 128/479 (26%)
Query: 39 SKSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEAS 98
SK P + R+L P + +IGK+G + I++ T I
Sbjct: 32 SKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKI------------------- 72
Query: 99 DNKKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQK 158
+ R EN G E S+ L++ + TS K
Sbjct: 73 ------------DVHRKENAGAAEKSITI-------------------LSTPEGTSAACK 101
Query: 159 ALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDK---- 214
++L + + E D + T+ + L++L + VG L+GK G +K+I++
Sbjct: 102 SILEIMHK--------EAQDIKFTE--EIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDT 151
Query: 215 ------LPTCALASDE-VVQITGEVDTVRKALKLISHQLLDNSPRDHES-------IPG- 259
L L + E + + G V+T KA + I ++ ++ D S IPG
Sbjct: 152 KITISPLQELTLYNPERTITVKGNVETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGL 211
Query: 260 --NPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEIL 317
N G P + G P A M P P+F +S E
Sbjct: 212 NLNALGLFPPTSGMPPPTSGPPSA------------MTPPYPQFEQS----------ETE 249
Query: 318 TFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRI 376
T L VG +IGK G I+ L + G IK+ A + + R+++I+GP
Sbjct: 250 TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPP------ 303
Query: 377 SAPQDAVLRVQTRIARAIPD------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKL 430
+A + Q RI I + E + + V S G ++GKGG + E++ L
Sbjct: 304 ----EAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNL 359
Query: 431 SGAYIRILGKDQIPKCASENEEVVL-INGEFEAVQEA---LFQITTRLRHHFFRDAFPS 485
S A + ++ +DQ P EN++VV+ I G F A Q A + +I T+++ H + A S
Sbjct: 360 SSAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVKQHQQQKALQS 414
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 137/352 (38%), Gaps = 67/352 (19%)
Query: 311 KPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV--MEAVSGTEDRLIVISG 368
K P L RLL + VG +IGK GA IR++ ++T I V E E + ++S
Sbjct: 33 KQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILST 92
Query: 369 PAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMR 428
P + SA ++L + + A+ I E + ++L +N +G L+GK G + ++
Sbjct: 93 P----EGTSAACKSILEIMHKEAQDIKFTEE--IPLKILAHNNFVGRLIGKEGRNLKKIE 146
Query: 429 KLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINR 488
+ + I I ++ E + + G E +A +I ++R + D S+N
Sbjct: 147 QDTDTKITISPLQEL--TLYNPERTITVKGNVETCAKAEEEIMKKIRESYEND-IASMN- 202
Query: 489 PLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFM 548
L + PG+ N + F G PPP S P SA
Sbjct: 203 -LQAHLI-----------------PGLNLN---ALGLFPPTSGMPPPTSGPP----SAM- 236
Query: 549 HHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDG 608
PP +P F V + +P V I G+ G
Sbjct: 237 -------TPP---------------------YPQFEQSETETVHLFIPALSVGAIIGKQG 268
Query: 609 ACLKQIRQISDAKITITDPK-PGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
+KQ+ + + A I I + P A ++II+G PE AQ I + E
Sbjct: 269 QHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFKAQGRIYGKIKEE 320
>gi|258574629|ref|XP_002541496.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237901762|gb|EEP76163.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 491
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 148/376 (39%), Gaps = 47/376 (12%)
Query: 316 ILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDR 375
+ R + IGKGG + +++ +G V + G +R++ +SGP
Sbjct: 131 FIHIRAVISSAEAATCIGKGGENVSQIRRLSGAKCTVSDYTRGAVERILTVSGP------ 184
Query: 376 ISAPQDAVLRVQTRIARAIPDN--------REQTVMTRLLVASNQIGCLLGKGGSIIAEM 427
QDAV + I R + + + +T RLL+ IG ++GK G I E+
Sbjct: 185 ----QDAVAKAFGLIIRTLNNEPLDAPSTAQSKTYPLRLLIPHILIGSIIGKSGVRIREI 240
Query: 428 RKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFR-----DA 482
++ SGA R+ D ++E V+L G +AV A + + L A
Sbjct: 241 QEHSGA--RLNASDSCLPLSTERSLVIL--GVADAVHIATYYVAATLVEQLTERFGGPAA 296
Query: 483 FPSINRPLNPTFL----DQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSF 538
R P + QV P+ + P + P ++ + G P
Sbjct: 297 SAYATRSGGPAGVIPGGMQVVPYVPQPAGGQYGHPDSFKRHHPQANRAMSTGYGMPYMQG 356
Query: 539 HPHDDHSAFMHHIHRPGMP--------PHMPDMKPWG----PQGLMEVGGPMGFPDFVGP 586
P A IH P PH P P+G P PMG P GP
Sbjct: 357 GPGPSPHAMQQPIHYNASPRQGYTGAGPHQP--APYGAPQPPHSHGTPAQPMGAPVAGGP 414
Query: 587 PHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTH 646
+++ +P +V I G+ GA + +IR +S + I I +P+ + E ++ I+GT E
Sbjct: 415 LTQQI--FIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQDNSNERLVTITGTQECNQ 472
Query: 647 AAQSLIQAFVMSETET 662
A ++ + + +T
Sbjct: 473 MALYMLYSRLGESKQT 488
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 114/284 (40%), Gaps = 76/284 (26%)
Query: 156 VQKALLLVFERMVEVEPETEVADQENTKSSK-FVLRLLVLSTQVGCLLGKGGCVIKQI-- 212
V KA L+ R + EP D +T SK + LRLL+ +G ++GK G I++I
Sbjct: 188 VAKAFGLII-RTLNNEP----LDAPSTAQSKTYPLRLLIPHILIGSIIGKSGVRIREIQE 242
Query: 213 ------DKLPTC-ALASDEVVQITGEVDTVRKALKLISHQLLDN--------SPRDHESI 257
+ +C L+++ + I G D V A ++ L++ + + +
Sbjct: 243 HSGARLNASDSCLPLSTERSLVILGVADAVHIATYYVAATLVEQLTERFGGPAASAYATR 302
Query: 258 PGNPTG--------------PS-------------HPLPDHSVSS-QGAPYATG------ 283
G P G P+ HP + ++S+ G PY G
Sbjct: 303 SGGPAGVIPGGMQVVPYVPQPAGGQYGHPDSFKRHHPQANRAMSTGYGMPYMQGGPGPSP 362
Query: 284 -------HRDV--------ADIHLPMPPSIPKF-HESGVLDRPKPSPEI---LTFRLLCH 324
H + A H P P P+ H G +P +P LT ++
Sbjct: 363 HAMQQPIHYNASPRQGYTGAGPHQPAPYGAPQPPHSHGTPAQPMGAPVAGGPLTQQIFIP 422
Query: 325 DERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
++ VG +IGKGGA I ++ +G IK+ E + +RL+ I+G
Sbjct: 423 NDMVGAIIGKGGAKINEIRHLSGSVIKINEPQDNSNERLVTITG 466
>gi|388502730|gb|AFK39431.1| unknown [Lotus japonicus]
Length = 123
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 47/68 (69%)
Query: 591 VPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQS 650
V +VV + + GEDG + +IRQIS A +T+ DP G ++ ++ISGTP+QT AAQS
Sbjct: 52 VEIVVSEHVFSSVYGEDGGNVDRIRQISGASVTVYDPSAGTSQGKVVISGTPDQTFAAQS 111
Query: 651 LIQAFVMS 658
L+QAF+ S
Sbjct: 112 LLQAFIQS 119
>gi|392339927|ref|XP_003753941.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 3
[Rattus norvegicus]
gi|392347297|ref|XP_003749789.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 3
[Rattus norvegicus]
gi|149033413|gb|EDL88214.1| insulin-like growth factor 2, binding protein 3 [Rattus norvegicus]
Length = 579
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 116/479 (24%), Positives = 189/479 (39%), Gaps = 128/479 (26%)
Query: 39 SKSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEAS 98
SK P + R+L P + +IGK+G + I++ T I
Sbjct: 189 SKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKI------------------- 229
Query: 99 DNKKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQK 158
+ R EN G E S+ L++ + TS K
Sbjct: 230 ------------DVHRKENTGAAEKSITI-------------------LSTPEGTSAACK 258
Query: 159 ALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDK---- 214
++L + + E D + T+ + L++L + VG L+GK G +K+I++
Sbjct: 259 SILEIMHK--------EAQDIKFTE--EIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDT 308
Query: 215 ------LPTCALASDE-VVQITGEVDTVRKALKLISHQLLDNSPRDHES-------IPG- 259
L L + E + + G V+T KA + I ++ ++ D S IPG
Sbjct: 309 KITISPLQELTLYNPERTITVKGNVETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGL 368
Query: 260 --NPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEIL 317
N G P + G P A M P P+F +S E
Sbjct: 369 NLNALGLFPPTSGMPPPTSGPPSA------------MTPPYPQFEQS----------ETE 406
Query: 318 TFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRI 376
T L VG +IGK G I+ L + G IK+ A + + R+++I+GP
Sbjct: 407 TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPP------ 460
Query: 377 SAPQDAVLRVQTRIARAIPD------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKL 430
+A + Q RI I + E + + V S G ++GKGG + E++ L
Sbjct: 461 ----EAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNL 516
Query: 431 SGAYIRILGKDQIPKCASENEEVVL-INGEFEAVQEA---LFQITTRLRHHFFRDAFPS 485
S A + ++ +DQ P EN++VV+ I G F A Q A + +I T+++ H + A S
Sbjct: 517 SSAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVKQHQQQKALQS 571
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 137/352 (38%), Gaps = 67/352 (19%)
Query: 311 KPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV--MEAVSGTEDRLIVISG 368
K P L RLL + VG +IGK GA IR++ ++T I V E E + ++S
Sbjct: 190 KQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENTGAAEKSITILST 249
Query: 369 PAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMR 428
P + SA ++L + + A+ I E + ++L +N +G L+GK G + ++
Sbjct: 250 P----EGTSAACKSILEIMHKEAQDIKFTEE--IPLKILAHNNFVGRLIGKEGRNLKKIE 303
Query: 429 KLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINR 488
+ + I I ++ E + + G E +A +I ++R + D S+N
Sbjct: 304 QDTDTKITISPLQEL--TLYNPERTITVKGNVETCAKAEEEIMKKIRESYEND-IASMN- 359
Query: 489 PLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFM 548
L + PG+ N + F G PPP S P SA
Sbjct: 360 -LQAHLI-----------------PGLNLN---ALGLFPPTSGMPPPTSGPP----SAM- 393
Query: 549 HHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDG 608
PP +P F V + +P V I G+ G
Sbjct: 394 -------TPP---------------------YPQFEQSETETVHLFIPALSVGAIIGKQG 425
Query: 609 ACLKQIRQISDAKITITDPK-PGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
+KQ+ + + A I I + P A ++II+G PE AQ I + E
Sbjct: 426 QHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFKAQGRIYGKIKEE 477
>gi|55742577|ref|NP_998282.1| poly(rC)-binding protein 4 [Danio rerio]
gi|33604078|gb|AAH56323.1| Zgc:65870 [Danio rerio]
gi|41946775|gb|AAH65955.1| Zgc:65870 [Danio rerio]
Length = 442
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 160/355 (45%), Gaps = 37/355 (10%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+ I + E +R+I I+G R
Sbjct: 5 LTLRLLMHGKEVGSIIGKKGETVKRIREESSARINISEG--SCPERIITITGATECVFR- 61
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A ++++ +A + + + V RL++ ++Q G L+GKGGS I E+R+ +GA
Sbjct: 62 -AFTMITIKLEEDLAALVANGTVTSKPPVTLRLVIPASQCGSLIGKGGSKIKEIREKTGA 120
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPT 493
+++ G D +P + E V I+G +A+ + + I T + + P T
Sbjct: 121 QVQVAG-DLLP---NSTERGVTISGSQDAIIQCVKLICTVILE----------SPPKGAT 166
Query: 494 FLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAV--GGPPPPGSFHPHDDHS---AFM 548
+ SP P G L+ ++ + H +V GG ++ + + + +
Sbjct: 167 IPYRPSPAP---GAVLLAGNQVFETSEFASHPLFSVAQGGLDLQQAYTVQNQYGIPHSEL 223
Query: 549 HHIHRPGMPPHM-PDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGED 607
+H+ M + P + Q L P G + +++P L+ I G
Sbjct: 224 AKLHQLSMQQGLGPIAQATATQVL-----PAGIESSSQTASQE--LLIPNDLIGSIIGRQ 276
Query: 608 GACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSETET 662
G + +IRQ+S A+I I ++ + I+G+P + AQ LI + + + T
Sbjct: 277 GTKINEIRQVSGAQIKIGSQLDSTSDRHVTITGSPISINLAQYLITSCLETAKST 331
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 127/295 (43%), Gaps = 62/295 (21%)
Query: 120 REEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQ 179
REE+S N E S E + + G T V +A ++ ++ E + VA+
Sbjct: 31 REESSA---RINISEGSCPERIITITG-----ATECVFRAFTMITIKLEE-DLAALVANG 81
Query: 180 ENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI------------DKLPTCALASDEVVQ 227
T LRL++ ++Q G L+GKGG IK+I D LP +++ V
Sbjct: 82 TVTSKPPVTLRLVIPASQCGSLIGKGGSKIKEIREKTGAQVQVAGDLLPN---STERGVT 138
Query: 228 ITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPT------------------GPSHPL- 268
I+G D + + +KLI +L++ P+ +IP P+ SHPL
Sbjct: 139 ISGSQDAIIQCVKLICTVILESPPKG-ATIPYRPSPAPGAVLLAGNQVFETSEFASHPLF 197
Query: 269 ----------PDHSVSSQGAPYATGHRDVADIH-LPMPPSI-PKFHESGVLDRP---KPS 313
++V +Q Y H ++A +H L M + P + P + S
Sbjct: 198 SVAQGGLDLQQAYTVQNQ---YGIPHSELAKLHQLSMQQGLGPIAQATATQVLPAGIESS 254
Query: 314 PEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
+ + LL ++ +G +IG+ G I ++Q +G IK+ + T DR + I+G
Sbjct: 255 SQTASQELLIPNDLIGSIIGRQGTKINEIRQVSGAQIKIGSQLDSTSDRHVTITG 309
>gi|255932595|ref|XP_002557854.1| Pc12g10310 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582473|emb|CAP80658.1| Pc12g10310 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 473
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 91/385 (23%), Positives = 147/385 (38%), Gaps = 88/385 (22%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISA 378
R + VIGKGG + +++ +G V + G +R++ +SGP
Sbjct: 109 IRAVISSPEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGP--------- 159
Query: 379 PQDAVLRVQTRIARAIPDN--------REQTVMTRLLVASNQIGCLLGKGGSIIAEMRKL 430
QDA + I R + + + +T RLL+ IG ++GKGGS I E+++
Sbjct: 160 -QDAAAKAFGLIIRTLNNEPLEAASTAQSKTYPLRLLIPHILIGSIIGKGGSRIREIQEA 218
Query: 431 SGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFF-RDAFPSINRP 489
SGA R+ D ++E V+L G +AV A + + L R P+ +
Sbjct: 219 SGA--RLNASDACLPLSTERSLVIL--GVADAVHIATYYVAVTLVEQLSERYGGPAASAY 274
Query: 490 LNPTFLD--------QVSPF-PSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSF-- 538
+ QV P+ P G G Y + P +F
Sbjct: 275 ATRSGGPAGAVPGGMQVVPYVPQPAG-------GQYGH----------------PDTFKR 311
Query: 539 -HPHDDHSA-------FMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRR 590
HPH + + ++H P P P P PQ GP FVG P +
Sbjct: 312 HHPHPNRAGGGAYGVPYLHGQPAPAPVPQTPMHFPAAPQAPYGGAGPHQPAPFVGGPQQP 371
Query: 591 VP-----------------------VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDP 627
P + +P +V I G+ GA + +IR +S + I I +P
Sbjct: 372 TPGRGPPTAPAPVGAAMPGQPLTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEP 431
Query: 628 KPGATETVIIISGTPEQTHAAQSLI 652
+ + E ++ I+GT E A ++
Sbjct: 432 QESSNERLVTITGTAECNQMALYML 456
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 400 QTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGE 459
Q + ++ + ++ +G ++GKGG+ I E+R LSG+ I+I + S NE +V I G
Sbjct: 391 QPLTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQE-----SSNERLVTITGT 445
Query: 460 FEAVQEALFQITTRL 474
E Q AL+ + +RL
Sbjct: 446 AECNQMALYMLYSRL 460
Score = 42.4 bits (98), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 33/54 (61%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPA 370
LT ++ ++ VG +IGKGGA I ++ +G IK+ E + +RL+ I+G A
Sbjct: 393 LTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQESSNERLVTITGTA 446
>gi|348502908|ref|XP_003439009.1| PREDICTED: poly(rC)-binding protein 2-like [Oreochromis niloticus]
Length = 324
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 112/243 (46%), Gaps = 36/243 (14%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI 212
T+ + KA ++ E++ E + T + + T +RL+V ++Q G L+GKGGC IK+I
Sbjct: 65 TTSIFKAFSMIIEKLEE-DISTSMTNSTATSKPPVTMRLVVPASQCGSLIGKGGCKIKEI 123
Query: 213 ------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGN 260
D LP +++ + + G ++ + +K I +L++ P+ +IP
Sbjct: 124 RESAGAQVQVAGDMLPN---STERAITVAGTPQSIIECVKQICIVMLESPPKG-VTIPYR 179
Query: 261 PTGPSHPLPDHSVSSQGAPYAT-GHRDVADIHLPMPPSIPKFHESGVLDRPKP------- 312
P P+ + + G YA G + + PS+ K H+ + P P
Sbjct: 180 PKPSGSPV----IFAGGQAYAVQGQHAIPQPDVSEGPSLTKLHQLAMQQSPFPIAHSNQG 235
Query: 313 -------SPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIV 365
S + + L ++ +G +IG+ GA I ++Q +G IK+ V G+ DR +
Sbjct: 236 FQAGMDASAQTGSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVT 295
Query: 366 ISG 368
I+G
Sbjct: 296 ITG 298
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 87/157 (55%), Gaps = 11/157 (7%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT--TSIF 69
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I+ ++ ++ + V RL+V ++Q G L+GKGG I E+R+ +GA
Sbjct: 70 KAFSMIIEKLEEDISTSMTNSTATSKPPVTMRLVVPASQCGSLIGKGGCKIKEIRESAGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
+++ G D +P + E + + G +++ E + QI
Sbjct: 130 QVQVAG-DMLP---NSTERAITVAGTPQSIIECVKQI 162
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 39/67 (58%)
Query: 593 VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLI 652
+ +P L+ I G GA + +IRQ+S A+I I +P G+T+ + I+G+ A+ LI
Sbjct: 251 LTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSHASISLAEYLI 310
Query: 653 QAFVMSE 659
A + SE
Sbjct: 311 NARLSSE 317
Score = 39.3 bits (90), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 396 DNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVL 455
D QT L + ++ IGC++G+ G+ I E+R++SGA I+I P S + +V
Sbjct: 241 DASAQTGSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN----PVEGSTDRQVT- 295
Query: 456 INGEFEAVQEALFQITTRL 474
I G ++ A + I RL
Sbjct: 296 ITGSHASISLAEYLINARL 314
>gi|71019141|ref|XP_759801.1| hypothetical protein UM03654.1 [Ustilago maydis 521]
gi|46099599|gb|EAK84832.1| hypothetical protein UM03654.1 [Ustilago maydis 521]
Length = 442
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 90/367 (24%), Positives = 151/367 (41%), Gaps = 52/367 (14%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
L R L + G +IGKGGA + L+++TG V + V G DR++ ++G +
Sbjct: 52 LQLRALVSTKEAGIIIGKGGANVAELREQTGVKAGVSKVVPGVHDRVLSVTGT------L 105
Query: 377 SAPQDAVLRVQTRIARAIPDN---------------REQTVMTRLLVASNQIGCLLGKGG 421
DA IA+ I +N QT RLL++ N +G ++G+ G
Sbjct: 106 VGISDAF----ALIAKTILENPLNAPVQADGSPAEAAAQTTSVRLLISHNLMGTVIGRQG 161
Query: 422 SIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRD 481
I ++ LSGA + + K+ +P+ E VV + G +A++ A+ +I L + R
Sbjct: 162 LKIKHIQDLSGARM-VASKEMLPQS---TERVVEVQGSVDAIRVAIHEIAKCLAEDWDRA 217
Query: 482 AFPSINRPLN---PTFL--DQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPG 536
+ P P L + RR+ P + ++ G
Sbjct: 218 QNVVLYLPGQGDGPGILAAGGMGGLQQQGSRRQGGPA-----YLAGAMSNMSLNSNSNAG 272
Query: 537 SFHPHDDHSAFMHHIHRPGMPPHMPD--MKPWGP--QGLMEVGGPMGFPDFVGPP----- 587
+FH + H+ H + G P+ + P G G G P+ PP
Sbjct: 273 AFHSNRQHN--NHTNNSTGSRRTDPNAVVTPGGGLVAGTTANSANAGEPNASAPPLVDAA 330
Query: 588 -HRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITD-PKPGATETVIIISGTPEQT 645
R + +P +V I G+ G+ + +IR++S ++I+I P E + I GTPE
Sbjct: 331 NLRTQNISIPSDMVGCIIGKGGSKITEIRRLSGSRISIAKVPHDETGERMFTIQGTPEAN 390
Query: 646 HAAQSLI 652
A L+
Sbjct: 391 EKALYLL 397
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 410 SNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQ 469
S+ +GC++GKGGS I E+R+LSG+ I I ++P + E + I G EA ++AL+
Sbjct: 341 SDMVGCIIGKGGSKITEIRRLSGSRISIA---KVPHDET-GERMFTIQGTPEANEKALYL 396
Query: 470 ITTRL 474
+ +L
Sbjct: 397 LYNQL 401
>gi|425778068|gb|EKV16213.1| hypothetical protein PDIP_37280 [Penicillium digitatum Pd1]
gi|425780605|gb|EKV18611.1| hypothetical protein PDIG_09250 [Penicillium digitatum PHI26]
Length = 496
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 91/382 (23%), Positives = 146/382 (38%), Gaps = 82/382 (21%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISA 378
R + VIGKGG + +++ +G V + G +R++ +SG
Sbjct: 112 IRAVISSPEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSG---------- 161
Query: 379 PQDAVLRVQTRIARAIPDN--------REQTVMTRLLVASNQIGCLLGKGGSIIAEMRKL 430
PQDA + I R + + + +T RLL+ IG ++GKGGS I E+++
Sbjct: 162 PQDAAAKAFGLIIRTLNNEPLEAASTAQSKTYPLRLLIPHILIGSIIGKGGSRIREIQEA 221
Query: 431 SGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFF-RDAFPSINRP 489
SGA R+ D ++E V+L G +AV A + + L R P+ +
Sbjct: 222 SGA--RLNASDACLPLSTERSLVIL--GVADAVHIATYYVAVTLVEQLSERYGGPAASAY 277
Query: 490 LNPTFLD--------QVSPF-PSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHP 540
+ QV P+ P G G Y + P K HP
Sbjct: 278 ATRSGGPAGAVPGGMQVVPYVPQPAG-------GQYGH--PETFK-----------RHHP 317
Query: 541 HDDHSA-------FMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVP- 592
H + + ++H P P P P PQ GP FVG P + P
Sbjct: 318 HPNRAGGGAYGVPYLHGQPAPAPVPQTPMHFPAAPQAPYGGAGPHQPAPFVGGPQQPTPG 377
Query: 593 ----------------------VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPG 630
+ +P +V I G+ GA + +IR +S + I I +P+
Sbjct: 378 RGPPTAPAPVGASMPGQPLTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQES 437
Query: 631 ATETVIIISGTPEQTHAAQSLI 652
+ E ++ I+GT E A ++
Sbjct: 438 SNERLVTITGTAECNQMALYML 459
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 400 QTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGE 459
Q + ++ + ++ +G ++GKGG+ I E+R LSG+ I+I + S NE +V I G
Sbjct: 394 QPLTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQE-----SSNERLVTITGT 448
Query: 460 FEAVQEALFQITTRLRHHFFRDAFPSI 486
E Q AL+ + +RL FPS+
Sbjct: 449 AECNQMALYMLYSRLGWSPPFPDFPSL 475
Score = 42.4 bits (98), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 33/54 (61%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPA 370
LT ++ ++ VG +IGKGGA I ++ +G IK+ E + +RL+ I+G A
Sbjct: 396 LTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQESSNERLVTITGTA 449
>gi|348564372|ref|XP_003467979.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
[Cavia porcellus]
Length = 741
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 117/479 (24%), Positives = 190/479 (39%), Gaps = 129/479 (26%)
Query: 39 SKSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEAS 98
SK P + R+L P + +IGK+G + I++ T I
Sbjct: 352 SKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKI------------------- 392
Query: 99 DNKKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQK 158
+ R EN G E S+ L++ + TS K
Sbjct: 393 ------------DVHRKENAGAAEKSITI-------------------LSTPEGTSAACK 421
Query: 159 ALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDK---- 214
++L + + E D + T+ + L++L + VG L+GK G +K+I++
Sbjct: 422 SILEIMHK--------EAQDIKFTE--EIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDT 471
Query: 215 ------LPTCALASDE-VVQITGEVDTVRKALKLISHQLLDNSPRDHES-------IPG- 259
L L + E + + G V+T KA + I ++ ++ D S IPG
Sbjct: 472 KITISPLQELTLYNPERTITVKGSVETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGL 531
Query: 260 --NPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEIL 317
N G P + G P A MPP P+F +S E
Sbjct: 532 NLNALGLFPPTSGMPPPTSGPPSA------------MPP-YPQFEQS----------ETE 568
Query: 318 TFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRI 376
T L VG +IGK G I+ L + G IK+ A + + R+++I+GP
Sbjct: 569 TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPP------ 622
Query: 377 SAPQDAVLRVQTRIARAIPD------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKL 430
+A + Q RI I + E + + V S G ++GKGG + E++ L
Sbjct: 623 ----EAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNL 678
Query: 431 SGAYIRILGKDQIPKCASENEEVVL-INGEFEAVQEA---LFQITTRLRHHFFRDAFPS 485
S A + ++ +DQ P EN++VV+ I G F A Q A + +I T+++ H + A S
Sbjct: 679 SSAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVKQHQQQKALQS 733
>gi|71895775|ref|NP_001025686.1| neuro-oncological ventral antigen 2 [Xenopus (Silurana) tropicalis]
gi|62205009|gb|AAH93475.1| neuro-oncological ventral antigen 2 [Xenopus (Silurana) tropicalis]
Length = 413
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 103/394 (26%), Positives = 162/394 (41%), Gaps = 77/394 (19%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA---VSGTEDRLIVISGPAHPD 373
L ++L G +IGKGG I L++ETG IK+ ++ GT +R+ ++ G A
Sbjct: 34 LFLKVLIPSYAAGSIIGKGGQTIVQLQRETGATIKLSKSKDFYPGTTERVCLVQGSA--- 90
Query: 374 DRISAPQDAVLRVQTRIA---RAIPD-----------------NREQTVMTRLLVASNQI 413
+++L V IA R +P N E+ +L+V +
Sbjct: 91 -------ESLLSVHNFIAEKVREVPQGGTKNDLGVLLPPQTTINAERAKQAKLIVPNTTA 143
Query: 414 GCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI--- 470
G ++GKGG+ + + + SGA++++ Q P + +E VV ++GE VQ+A+ I
Sbjct: 144 GLIIGKGGATVRSIMEESGAWVQL---SQKPAGPNLHERVVTVSGEPSQVQKAIRSIIHK 200
Query: 471 --------TTRLRHHFFRDAFPSINRPLNPT-------FLDQV-SPF------PSFIGRR 508
TT L + P N NPT +QV +PF P I
Sbjct: 201 SREDPPQGTTHLNISYTNSQGPVANS--NPTGSPYAGGSAEQVLTPFQPAPPAPPAITGG 258
Query: 509 ELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGP 568
+L N S+ +G P G HP + + G P + G
Sbjct: 259 DLLAISAALNTLASYGYSTGMGFNPLVGGVHPAAVN-LLASYTGEAG-----PALGLGGG 312
Query: 569 QGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPK 628
L+E MG G + + VP +LV I G+ G L + ++++ A+I I+
Sbjct: 313 GILLE---KMGAESVTG--KETLEMAVPETLVGAILGKGGKTLVEYQELTGARIQISKKG 367
Query: 629 ---PGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
PG + I+G P T AAQ LI V E
Sbjct: 368 EFVPGTRSRKVTITGPPGATQAAQYLIGQRVAYE 401
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 107/256 (41%), Gaps = 61/256 (23%)
Query: 44 GGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEET---VSGSDERLVVIEASDN 100
G + +VL P +IGK G+ + Q+ ++TG TI++ ++ G+ ER+ +++ S
Sbjct: 32 GELFLKVLIPSYAAGSIIGKGGQTIVQLQRETGATIKLSKSKDFYPGTTERVCLVQGSAE 91
Query: 101 KKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKAL 160
+ N A R G + N+ VL+
Sbjct: 92 SLLSVHNFIAEKVREVPQG---------------GTKNDLGVLLP--------------- 121
Query: 161 LLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIK---------- 210
P+T + + E K +K L+V +T G ++GKGG ++
Sbjct: 122 -----------PQTTI-NAERAKQAK----LIVPNTTAGLIIGKGGATVRSIMEESGAWV 165
Query: 211 QIDKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPD 270
Q+ + P + VV ++GE V+KA++ I H+ ++ P+ + + T P+ +
Sbjct: 166 QLSQKPAGPNLHERVVTVSGEPSQVQKAIRSIIHKSREDPPQGTTHLNISYTNSQGPVAN 225
Query: 271 HSVSSQGAPYATGHRD 286
+ + G+PYA G +
Sbjct: 226 SNPT--GSPYAGGSAE 239
>gi|392873506|gb|AFM85585.1| heterogeneous nuclear ribonucleoprotein K [Callorhinchus milii]
Length = 424
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 102/413 (24%), Positives = 162/413 (39%), Gaps = 80/413 (19%)
Query: 303 ESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDR 362
E R + + + + RLL + G VIGKGG I+SL+ + + V ++
Sbjct: 34 EEQAFKRSRNNDQCVELRLLLQSKNAGAVIGKGGKNIKSLRTDYNASVSVPDS------- 86
Query: 363 LIVISGPAHPDDRISAPQDAVLRVQTRIARAIP--------DNREQTVMTRLLVASNQIG 414
SGP +RI + + + +++ +P ++ R+LV +Q G
Sbjct: 87 ----SGP----ERILSINADIETIGDILSKIVPTLEEYQHYKGKDFDCELRMLVHQSQAG 138
Query: 415 CLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRL 474
++G G I E+R+ + I++ + C + VVL+ G+ + V E + I L
Sbjct: 139 SIIGVKGVKIKELRESTQTTIKLFQE----CCPHSTDRVVLLGGKPDRVVECIKIIMGLL 194
Query: 475 RHHFFRDAFPSINRPLNPTFLDQVSPFPSFI------GRREL--SPPGM---------YS 517
+ +P +P F D+ + F GRR + P G Y
Sbjct: 195 SESPVKGR----AQPYDPNFYDETYDYGGFTMMFDERGRRGMPFGPRGRGGPHPPSPGYE 250
Query: 518 NFGPSFHKFDAVGGPPPPGSFHPHDDHS----------------AFMHHIHRPGMPPHMP 561
GP VG P PP +DD S A I P PP
Sbjct: 251 RRGPMGPPRGPVGRPIPPPRRDAYDDMSPPPRRGPPPPLSRSRNARGGRIPPPPPPPPRG 310
Query: 562 DMKPWGPQGLMEVGGP----MGFPDF--------VGPPHRRVPVVVPRSLVPIIQGEDGA 609
+ G G +G MG + +G P V +P+ L I G+ G
Sbjct: 311 SDRDRGMYGRSRLGADRYDGMGISGYGGRGRYGDLGGPVITTQVTIPKDLAGSIIGKGGQ 370
Query: 610 CLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQ----AFVMS 658
+KQIR S A I I +P G+ + +I I+GT +Q AQ L+Q +F M+
Sbjct: 371 RIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSCSSFFMT 423
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 38/63 (60%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
I +V P +IGK G+ + QI ++G +I+++E + GS++R++ I + ++ + +
Sbjct: 350 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNA 409
Query: 106 ENL 108
+ L
Sbjct: 410 QYL 412
>gi|30795212|ref|NP_006538.2| insulin-like growth factor 2 mRNA-binding protein 3 [Homo sapiens]
gi|114612360|ref|XP_001157593.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 3
isoform 4 [Pan troglodytes]
gi|397472938|ref|XP_003807987.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3 [Pan
paniscus]
gi|254763311|sp|O00425.2|IF2B3_HUMAN RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 3;
Short=IGF2 mRNA-binding protein 3; Short=IMP-3; AltName:
Full=IGF-II mRNA-binding protein 3; AltName: Full=KH
domain-containing protein overexpressed in cancer;
Short=hKOC; AltName: Full=VICKZ family member 3
gi|4191612|gb|AAD09828.1| IGF-II mRNA-binding protein 3 [Homo sapiens]
gi|40807047|gb|AAH65269.1| Insulin-like growth factor 2 mRNA binding protein 3 [Homo sapiens]
gi|51095013|gb|EAL24257.1| IGF-II mRNA-binding protein 3 [Homo sapiens]
gi|119614193|gb|EAW93787.1| insulin-like growth factor 2 mRNA binding protein 3, isoform CRA_b
[Homo sapiens]
gi|261861412|dbj|BAI47228.1| insulin-like growth factor 2 mRNA binding protein 3 [synthetic
construct]
gi|410216456|gb|JAA05447.1| insulin-like growth factor 2 mRNA binding protein 3 [Pan
troglodytes]
gi|410260770|gb|JAA18351.1| insulin-like growth factor 2 mRNA binding protein 3 [Pan
troglodytes]
gi|410287810|gb|JAA22505.1| insulin-like growth factor 2 mRNA binding protein 3 [Pan
troglodytes]
gi|410334615|gb|JAA36254.1| insulin-like growth factor 2 mRNA binding protein 3 [Pan
troglodytes]
Length = 579
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 117/479 (24%), Positives = 189/479 (39%), Gaps = 128/479 (26%)
Query: 39 SKSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEAS 98
SK P + R+L P + +IGK+G + I++ T I V
Sbjct: 189 SKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVH---------------- 232
Query: 99 DNKKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQK 158
R EN G E S+ L++ + TS K
Sbjct: 233 ---------------RKENAGAAEKSITI-------------------LSTPEGTSAACK 258
Query: 159 ALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDK---- 214
++L + + E D + T+ + L++L + VG L+GK G +K+I++
Sbjct: 259 SILEIMHK--------EAQDIKFTE--EIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDT 308
Query: 215 ------LPTCALASDE-VVQITGEVDTVRKALKLISHQLLDNSPRDHES-------IPG- 259
L L + E + + G V+T KA + I ++ ++ D S IPG
Sbjct: 309 KITISPLQELTLYNPERTITVKGNVETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGL 368
Query: 260 --NPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEIL 317
N G P + G P A M P P+F +S E
Sbjct: 369 NLNALGLFPPTSGMPPPTSGPPSA------------MTPPYPQFEQS----------ETE 406
Query: 318 TFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRI 376
T L VG +IGK G I+ L + G IK+ A + + R+++I+GP
Sbjct: 407 TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPP------ 460
Query: 377 SAPQDAVLRVQTRIARAIPD------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKL 430
+A + Q RI I + E + + V S G ++GKGG + E++ L
Sbjct: 461 ----EAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNL 516
Query: 431 SGAYIRILGKDQIPKCASENEEVVL-INGEFEAVQEA---LFQITTRLRHHFFRDAFPS 485
S A + ++ +DQ P EN++VV+ I G F A Q A + +I T+++ H + A S
Sbjct: 517 SSAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVKQHQQQKALQS 571
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 137/353 (38%), Gaps = 67/353 (18%)
Query: 311 KPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV--MEAVSGTEDRLIVISG 368
K P L RLL + VG +IGK GA IR++ ++T I V E E + ++S
Sbjct: 190 KQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILST 249
Query: 369 PAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMR 428
P + SA ++L + + A+ I E + ++L +N +G L+GK G + ++
Sbjct: 250 P----EGTSAACKSILEIMHKEAQDIKFTEE--IPLKILAHNNFVGRLIGKEGRNLKKIE 303
Query: 429 KLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINR 488
+ + I I ++ E + + G E +A +I ++R + D S+N
Sbjct: 304 QDTDTKITISPLQEL--TLYNPERTITVKGNVETCAKAEEEIMKKIRESYEND-IASMN- 359
Query: 489 PLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFM 548
L + PG+ N + F G PPP S P SA
Sbjct: 360 -LQAHLI-----------------PGLNLN---ALGLFPPTSGMPPPTSGPP----SAM- 393
Query: 549 HHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDG 608
PP +P F V + +P V I G+ G
Sbjct: 394 -------TPP---------------------YPQFEQSETETVHLFIPALSVGAIIGKQG 425
Query: 609 ACLKQIRQISDAKITITDPK-PGATETVIIISGTPEQTHAAQSLIQAFVMSET 660
+KQ+ + + A I I + P A ++II+G PE AQ I + E
Sbjct: 426 QHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFKAQGRIYGKIKEEN 478
>gi|395830897|ref|XP_003788549.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
[Otolemur garnettii]
Length = 579
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 117/479 (24%), Positives = 189/479 (39%), Gaps = 128/479 (26%)
Query: 39 SKSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEAS 98
SK P + R+L P + +IGK+G + I++ T I V
Sbjct: 189 SKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVH---------------- 232
Query: 99 DNKKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQK 158
R EN G E S+ L++ + TS K
Sbjct: 233 ---------------RKENAGAAEKSITI-------------------LSTPEGTSAACK 258
Query: 159 ALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDK---- 214
++L + + E D + T+ + L++L + VG L+GK G +K+I++
Sbjct: 259 SILEIMHK--------EAQDIKFTE--EIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDT 308
Query: 215 ------LPTCALASDE-VVQITGEVDTVRKALKLISHQLLDNSPRDHES-------IPG- 259
L L + E + + G V+T KA + I ++ ++ D S IPG
Sbjct: 309 KITISPLQELTLYNPERTITVKGNVETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGL 368
Query: 260 --NPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEIL 317
N G P + G P A M P P+F +S E
Sbjct: 369 NLNALGLFPPTSGMPPPTSGPPSA------------MTPPYPQFEQS----------ETE 406
Query: 318 TFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRI 376
T L VG +IGK G I+ L + G IK+ A + + R+++I+GP
Sbjct: 407 TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPP------ 460
Query: 377 SAPQDAVLRVQTRIARAIPD------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKL 430
+A + Q RI I + E + + V S G ++GKGG + E++ L
Sbjct: 461 ----EAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNL 516
Query: 431 SGAYIRILGKDQIPKCASENEEVVL-INGEFEAVQEA---LFQITTRLRHHFFRDAFPS 485
S A + ++ +DQ P EN++VV+ I G F A Q A + +I T+++ H + A S
Sbjct: 517 SSAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVKQHQQQKALQS 571
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 137/352 (38%), Gaps = 67/352 (19%)
Query: 311 KPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV--MEAVSGTEDRLIVISG 368
K P L RLL + VG +IGK GA IR++ ++T I V E E + ++S
Sbjct: 190 KQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILST 249
Query: 369 PAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMR 428
P + SA ++L + + A+ I E + ++L +N +G L+GK G + ++
Sbjct: 250 P----EGTSAACKSILEIMHKEAQDIKFTEE--IPLKILAHNNFVGRLIGKEGRNLKKIE 303
Query: 429 KLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINR 488
+ + I I ++ E + + G E +A +I ++R + D S+N
Sbjct: 304 QDTDTKITISPLQEL--TLYNPERTITVKGNVETCAKAEEEIMKKIRESYEND-IASMN- 359
Query: 489 PLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFM 548
L + PG+ N + F G PPP S P SA
Sbjct: 360 -LQAHLI-----------------PGLNLN---ALGLFPPTSGMPPPTSGPP----SAM- 393
Query: 549 HHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDG 608
PP +P F V + +P V I G+ G
Sbjct: 394 -------TPP---------------------YPQFEQSETETVHLFIPALSVGAIIGKQG 425
Query: 609 ACLKQIRQISDAKITITDPK-PGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
+KQ+ + + A I I + P A ++II+G PE AQ I + E
Sbjct: 426 QHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFKAQGRIYGKIKEE 477
>gi|109067156|ref|XP_001098422.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 3
isoform 3 [Macaca mulatta]
gi|402863939|ref|XP_003896249.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
[Papio anubis]
Length = 579
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 117/479 (24%), Positives = 189/479 (39%), Gaps = 128/479 (26%)
Query: 39 SKSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEAS 98
SK P + R+L P + +IGK+G + I++ T I V
Sbjct: 189 SKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVH---------------- 232
Query: 99 DNKKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQK 158
R EN G E S+ L++ + TS K
Sbjct: 233 ---------------RKENAGAAEKSITI-------------------LSTPEGTSAACK 258
Query: 159 ALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDK---- 214
++L + + E D + T+ + L++L + VG L+GK G +K+I++
Sbjct: 259 SILEIMHK--------EAQDIKFTE--EIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDT 308
Query: 215 ------LPTCALASDE-VVQITGEVDTVRKALKLISHQLLDNSPRDHES-------IPG- 259
L L + E + + G V+T KA + I ++ ++ D S IPG
Sbjct: 309 KITISPLQELTLYNPERTITVKGNVETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGL 368
Query: 260 --NPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEIL 317
N G P + G P A M P P+F +S E
Sbjct: 369 NLNALGLFPPTSGMPPPTSGPPSA------------MTPPYPQFEQS----------ETE 406
Query: 318 TFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRI 376
T L VG +IGK G I+ L + G IK+ A + + R+++I+GP
Sbjct: 407 TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPP------ 460
Query: 377 SAPQDAVLRVQTRIARAIPD------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKL 430
+A + Q RI I + E + + V S G ++GKGG + E++ L
Sbjct: 461 ----EAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNL 516
Query: 431 SGAYIRILGKDQIPKCASENEEVVL-INGEFEAVQEA---LFQITTRLRHHFFRDAFPS 485
S A + ++ +DQ P EN++VV+ I G F A Q A + +I T+++ H + A S
Sbjct: 517 SSAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVKQHQQQKALQS 571
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 137/353 (38%), Gaps = 67/353 (18%)
Query: 311 KPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV--MEAVSGTEDRLIVISG 368
K P L RLL + VG +IGK GA IR++ ++T I V E E + ++S
Sbjct: 190 KQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILST 249
Query: 369 PAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMR 428
P + SA ++L + + A+ I E + ++L +N +G L+GK G + ++
Sbjct: 250 P----EGTSAACKSILEIMHKEAQDIKFTEE--IPLKILAHNNFVGRLIGKEGRNLKKIE 303
Query: 429 KLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINR 488
+ + I I ++ E + + G E +A +I ++R + D S+N
Sbjct: 304 QDTDTKITISPLQEL--TLYNPERTITVKGNVETCAKAEEEIMKKIRESYEND-IASMN- 359
Query: 489 PLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFM 548
L + PG+ N + F G PPP S P SA
Sbjct: 360 -LQAHLI-----------------PGLNLN---ALGLFPPTSGMPPPTSGPP----SAM- 393
Query: 549 HHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDG 608
PP +P F V + +P V I G+ G
Sbjct: 394 -------TPP---------------------YPQFEQSETETVHLFIPALSVGAIIGKQG 425
Query: 609 ACLKQIRQISDAKITITDPK-PGATETVIIISGTPEQTHAAQSLIQAFVMSET 660
+KQ+ + + A I I + P A ++II+G PE AQ I + E
Sbjct: 426 QHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFKAQGRIYGKIKEEN 478
>gi|378726019|gb|EHY52478.1| hypothetical protein HMPREF1120_00690 [Exophiala dermatitidis
NIH/UT8656]
Length = 365
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 146/356 (41%), Gaps = 59/356 (16%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT R + + G +IGK G + L++ETG V + V G DR++ ++GP
Sbjct: 46 LTLRAIVSTKEAGVIIGKAGKNVADLREETGVKAGVSKVVQGVHDRVLTVTGPL------ 99
Query: 377 SAPQDAVLRVQTRIARAIPDNREQTVM-----------TRLLVASNQIGCLLGKGGSIIA 425
+ + + +A+ + + Q M RLL++ NQ+G ++G+ G I
Sbjct: 100 ----SGIAKAYSLVAKGLLEGAPQVGMGGVVQNNGTHPIRLLISHNQMGTIIGRQGLKIK 155
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPS 485
++ +SG + + K+ +P+ E +V + G E + +A+++I L + R
Sbjct: 156 HIQDVSGVRM-VAQKEMLPQST---ERIVEVQGTPEGIDKAVWEIGKCLVDDWQRGTGTV 211
Query: 486 INRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHS 545
+ NP QV P PP AVGG P G+ + S
Sbjct: 212 L---YNPAVRVQVGSGP--------LPP--------------AVGGGLPAGNNYIGGGRS 246
Query: 546 AFMHHIHRPGMPPHMPDMKPWGPQGLMEVGG-PMGFPDFVGPPHRRVPVVVPRSLVPIIQ 604
+R G + + + + GG PM D G + + +P +V I
Sbjct: 247 -----YNRTGNGADFSESRGYTRGNDLPRGGIPMVTED--GEEVQTQNISIPADMVGCII 299
Query: 605 GEDGACLKQIRQISDAKITITD-PKPGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
G G+ + +IR+ S A+I+I P E + I G+ A L+ + +E
Sbjct: 300 GRGGSKISEIRKTSGARISIAKAPHDDTGERMFTIMGSASANERALYLLYENLEAE 355
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 107/256 (41%), Gaps = 46/256 (17%)
Query: 154 SKVQKALLLVFERMVEVEPETEVAD--QENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQ 211
S + KA LV + ++E P+ + Q N +RLL+ Q+G ++G+ G IK
Sbjct: 100 SGIAKAYSLVAKGLLEGAPQVGMGGVVQNN---GTHPIRLLISHNQMGTIIGRQGLKIKH 156
Query: 212 IDKLPTCAL---------ASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPT 262
I + + +++ +V++ G + + KA+ I L+D+ R ++ NP
Sbjct: 157 IQDVSGVRMVAQKEMLPQSTERIVEVQGTPEGIDKAVWEIGKCLVDDWQRGTGTVLYNPA 216
Query: 263 G----PSHPLP------------------DHSVSSQGAPYATGHRDVADIHLPMPPSIPK 300
S PLP ++ + GA ++ LP IP
Sbjct: 217 VRVQVGSGPLPPAVGGGLPAGNNYIGGGRSYNRTGNGADFSESRGYTRGNDLPRG-GIPM 275
Query: 301 FHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA-VSGT 359
E G E+ T + + VG +IG+GG+ I +++ +G I + +A T
Sbjct: 276 VTEDG--------EEVQTQNISIPADMVGCIIGRGGSKISEIRKTSGARISIAKAPHDDT 327
Query: 360 EDRLIVISGPAHPDDR 375
+R+ I G A ++R
Sbjct: 328 GERMFTIMGSASANER 343
>gi|268567874|ref|XP_002640100.1| Hypothetical protein CBG12588 [Caenorhabditis briggsae]
Length = 398
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 99/375 (26%), Positives = 154/375 (41%), Gaps = 71/375 (18%)
Query: 320 RLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAP 379
RLL + G +IGKGG I+ L+ E ++V + S T +R+ ++ A
Sbjct: 53 RLLVSSKSAGAIIGKGGENIKRLRAEFNAHVQVPD--SNTPERVCTVT----------AD 100
Query: 380 QDAVLRVQTRIARAIPDNREQT--VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRI 437
+ VL + + + DN + R+L+ + G L+G+ G+ I E+R+ A ++I
Sbjct: 101 EKTVLNILKDVLPRLEDNFSERDPCEVRVLIHQSHAGALIGRNGTKIKELREKCSARLKI 160
Query: 438 LGKDQIPKCASENEEVVLI-NGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFL- 495
CA + + VLI +GE + V + ++ L+ + + P P+F
Sbjct: 161 F-----TGCAPGSTDRVLITSGEQKNVLAIIEEVMKELKEIPIKGSAT----PYLPSFHY 211
Query: 496 --DQVSPFPSFIGRRELSPPGMYSNFGPSFHKFD--------------AVGGPPPPG--- 536
+S + F PG S GP ++ + GG PG
Sbjct: 212 DPSNISEYGGF--------PGNVSGGGPQNNRGPAPPRGGQGPPGGPRSYGGAITPGGGP 263
Query: 537 -SFHPHDDHSAFMHHIHRPGMPPHMPDMKPWG-----PQGLMEVGGPMGFPDFVGPPHRR 590
SF D H R G P M G PQG + G P GP
Sbjct: 264 RSFEAGDFHQ------FRGGPVPGQYSMNAPGYAQGPPQG--QFGAPANAGYGYGPGGGG 315
Query: 591 ----VPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTH 646
V +P L I G G + +IRQ S A+IT+ +P G E +I I GT +Q H
Sbjct: 316 PVTTAQVTIPSDLGGTIIGRGGERIARIRQESGAQITL-EPSNGQPERIITIKGTEQQIH 374
Query: 647 AAQSLIQAFVMSETE 661
+AQ L+Q V + T+
Sbjct: 375 SAQYLLQQCVRNSTQ 389
>gi|270007202|gb|EFA03650.1| hypothetical protein TcasGA2_TC013744 [Tribolium castaneum]
Length = 710
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 152/338 (44%), Gaps = 41/338 (12%)
Query: 175 EVADQE--NTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI----DKLPTCALASD----- 223
EV QE NT + L++L + +G ++GKGG IK+I D T + +D
Sbjct: 354 EVMQQEANNTNKGEICLKILAHNNLIGRIIGKGGNTIKRIMQETDTKITVSSINDINSFN 413
Query: 224 --EVVQITGEVDTVRKALKLISHQLLDNSPRDHESI-PGNPTGPS-HPLPDHSVSSQGAP 279
++ + G +D + +A IS +L + D +++ P P HP+ +++ G
Sbjct: 414 LERIITVKGAIDNMSRAEAQISAKLRQSYENDLQAMAPQTMMFPGLHPMA--MMATAGIG 471
Query: 280 YATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAII 339
Y G R + P P P G D + T L + VG +IG G+ I
Sbjct: 472 Y--GSRGLYTGQAPYPGMYPAGAAQGGGDSQE------TTYLYIPNNAVGAIIGTKGSHI 523
Query: 340 RSLKQETGCDIKV-----MEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAI 394
R++ + +G +K+ + +R + I G P+ + A +++ A
Sbjct: 524 RNIIRFSGASVKIAPIDETKPQETQNERRVTIVG--SPEAQWKAQYLIFEKMREEGFVAG 581
Query: 395 PDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVV 454
D+ TV ++V S+Q+G ++GKGG + E+++++G+ I++ + P+ E+E V
Sbjct: 582 SDDVRLTV--EIMVPSSQVGRIIGKGGQNVRELQRVTGSVIKLPEQGASPQ---EDETTV 636
Query: 455 LINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNP 492
I G F +VQ A R+R + P RP P
Sbjct: 637 HIIGPFFSVQSA----QRRIRAMVLQSVVPLQGRPRQP 670
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 132/341 (38%), Gaps = 68/341 (19%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRIS 377
R+L + VG +IG+ G+ IR + Q+T + V + G+ ++ I I G +P++
Sbjct: 290 LRILVQSDMVGAIIGRQGSTIRQITQQTRARVDVHRKDNVGSLEKAITIYG--NPEN--- 344
Query: 378 APQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRI 437
+A R+ + + + + + ++L +N IG ++GKGG+ I + + + I +
Sbjct: 345 -CTNACKRILEVMQQEANNTNKGEICLKILAHNNLIGRIIGKGGNTIKRIMQETDTKITV 403
Query: 438 LGKDQIPKCASEN-EEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLD 496
I S N E ++ + G + + A QI+ +LR + D + + P
Sbjct: 404 ---SSINDINSFNLERIITVKGAIDNMSRAEAQISAKLRQSYENDL-----QAMAP---- 451
Query: 497 QVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGM 556
Q FP L P M + G + G P PGM
Sbjct: 452 QTMMFPG------LHPMAMMATAGIGYGSRGLYTGQAP------------------YPGM 487
Query: 557 PPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQ 616
P G G D + +P + V I G G+ ++ I +
Sbjct: 488 YP---------------AGAAQGGGD----SQETTYLYIPNNAVGAIIGTKGSHIRNIIR 528
Query: 617 ISDAKITI-----TDPKPGATETVIIISGTPEQTHAAQSLI 652
S A + I T P+ E + I G+PE AQ LI
Sbjct: 529 FSGASVKIAPIDETKPQETQNERRVTIVGSPEAQWKAQYLI 569
>gi|50311087|ref|XP_455567.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644703|emb|CAG98275.1| KLLA0F10703p [Kluyveromyces lactis]
Length = 417
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 81/371 (21%), Positives = 148/371 (39%), Gaps = 71/371 (19%)
Query: 314 PEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPD 373
P + R+LC ++ V+G G + +K ET I V + ++G +R+I + G
Sbjct: 64 PNYINLRMLCLMKQASKVVGGKGERVNRIKSETNTRINVSDNINGVMERVIFVRGKC--- 120
Query: 374 DRISAPQDAVLRVQTRIARAI-------PDNREQTVMTRLLVASNQIGCLLGKGGSIIAE 426
+ V R +I RAI + R ++ LL+ + +GC++G+ GS + E
Sbjct: 121 -------EEVARAFGKIVRAINNESDDDSNERSLPLVVNLLIPHHFMGCIIGRQGSRLHE 173
Query: 427 MRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI-------TTRLRHHFF 479
+ LS A R++ Q + N+ ++ + G +A+ A + I ++L++
Sbjct: 174 IEDLSAA--RLMASPQ--QLPMSNDRILSLTGVADAIHIATYYIGQTILENESKLKNKKS 229
Query: 480 RDAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFH 539
P P++ ++ + + G +P + P +H
Sbjct: 230 VFYHPG---PMHSVLVNNYQMYMIYSGGAPTNPQDITPMVAPHQEHH----------QYH 276
Query: 540 PHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVG-------------- 585
P D + ++R PP P GPQ ++ + D V
Sbjct: 277 PMDKKT-----MNRRTKPP--VSKYPIGPQQSLQ-----PYTDMVDSCKHVKIISQLQQS 324
Query: 586 --PPHRRVP--VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGT 641
PH +P V + V + G+ G ++QI+Q + I I DP G E +++ GT
Sbjct: 325 PISPHLVLPQEVFIDNKFVGNVIGKGGKNIQQIKQSTGCMIKINDPVEGLDERKLVLIGT 384
Query: 642 PEQTHAAQSLI 652
P T A +I
Sbjct: 385 PLATQTAIMMI 395
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 93/438 (21%), Positives = 160/438 (36%), Gaps = 126/438 (28%)
Query: 9 KRPHDDDNHTEPNGKEKSQKLAGD--YSENQPSKSFPGGIMFRVLCPVSKIDGVIGKDGE 66
KR +DN EP E L GD + + S P I R+LC + + V+G GE
Sbjct: 32 KRVALEDNEAEPQNSE----LNGDGTHLTEKDSGQVPNYINLRMLCLMKQASKVVGGKGE 87
Query: 67 MMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASVA 126
+++I +T I SDN E + + E R +
Sbjct: 88 RVNRIKSETNTR----------------INVSDNINGVMERVIFVRGKCEEVARAFGKIV 131
Query: 127 DESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSK 186
+N+ +D NE +S
Sbjct: 132 RAINNESDDDSNE-------------------------------------------RSLP 148
Query: 187 FVLRLLVLSTQVGCLLGKGGCVIKQIDKLPTCAL---------ASDEVVQITGEVDTVRK 237
V+ LL+ +GC++G+ G + +I+ L L ++D ++ +TG D +
Sbjct: 149 LVVNLLIPHHFMGCIIGRQGSRLHEIEDLSAARLMASPQQLPMSNDRILSLTGVADAIHI 208
Query: 238 ALKLISHQLLDNSPR--DHESIPGNPTGPSH-----------------PLPDHSVSSQGA 278
A I +L+N + + +S+ +P GP H P ++ A
Sbjct: 209 ATYYIGQTILENESKLKNKKSVFYHP-GPMHSVLVNNYQMYMIYSGGAPTNPQDITPMVA 267
Query: 279 PYATGHR----DVADIHLPMPPSIPKF------------------HESGVLDRPKPSP-- 314
P+ H+ D ++ P + K+ ++ + + SP
Sbjct: 268 PHQEHHQYHPMDKKTMNRRTKPPVSKYPIGPQQSLQPYTDMVDSCKHVKIISQLQQSPIS 327
Query: 315 --EILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHP 372
+L + ++ VG VIGKGG I+ +KQ TGC IK+ + V G ++R +V+ G
Sbjct: 328 PHLVLPQEVFIDNKFVGNVIGKGGKNIQQIKQSTGCMIKINDPVEGLDERKLVLIGTP-- 385
Query: 373 DDRISAPQDAVLRVQTRI 390
A Q A++ + RI
Sbjct: 386 ----LATQTAIMMINNRI 399
>gi|345311367|ref|XP_001520914.2| PREDICTED: poly(rC)-binding protein 4-like [Ornithorhynchus
anatinus]
Length = 447
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 88/369 (23%), Positives = 160/369 (43%), Gaps = 34/369 (9%)
Query: 307 LDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVI 366
LD P+ S LT R+L H + VG +IGK G ++ +++++ I + E +R+ I
Sbjct: 8 LDEPELS-ITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTI 64
Query: 367 SGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSI 423
+G A ++ + P+ + V RL++ ++Q G L+GK G+
Sbjct: 65 TGST--GAVFHAVSMIAFKLDEDLCTGPPNGGSVSKPPVTLRLVIPASQCGSLIGKAGAK 122
Query: 424 IAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAF 483
I E+R+ +GA +++ G D +P + E V ++G +A+ + QI + + A
Sbjct: 123 IKEIRESTGAQVQVAG-DLLP---NSTERAVTVSGVPDAIILCVRQICAVILESPPKGA- 177
Query: 484 PSINRPLNPTF-LDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHD 542
P +P+ L V + + + SN +H+ + G P G +
Sbjct: 178 ---TIPYHPSLSLGTVLLSTNQVANIAIQKQERGSNR--QYHQVEHGSGQP--GKLRGNG 230
Query: 543 DHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGP---MGFPDFV-----GPPHRRVPVV 594
+ + + +PP P + L ++ GP P V G +
Sbjct: 231 QEAVEVAAVSMGPLPPPEPKVS-----KLQQLSGPPVPFTSPSVVPGLDPGAQTSSQEFL 285
Query: 595 VPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQA 654
VP L+ + G G+ + +IRQ+S A I I + G+ E + I+G+P AQ LI A
Sbjct: 286 VPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQTEGSGERHVTITGSPVSIALAQYLITA 345
Query: 655 FVMSETETT 663
+ + T+
Sbjct: 346 CLETAKSTS 354
>gi|225707620|gb|ACO09656.1| PolyrC-binding protein 2 [Osmerus mordax]
Length = 318
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 109/241 (45%), Gaps = 38/241 (15%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI 212
T+ + KA ++ E++ E + + + + T LR++V ++Q G L+GKGGC IK+I
Sbjct: 65 TTAIFKAFSMIIEKLEE-DISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEI 123
Query: 213 ------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGN 260
D LP +++ + I G ++ + +K I +L+ SP +IP
Sbjct: 124 RESTGAQVQVAGDMLPN---STERAITIAGTPQSIIECVKQICVVMLEQSPPKGVTIPYR 180
Query: 261 PTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKP-------- 312
P P+ + + G YA V H P + K H+ + P P
Sbjct: 181 PKPSGSPV----IFAGGQAYA-----VQGQHAIPQPDLTKLHQLAMQQSPFPIAPNNQGF 231
Query: 313 -----SPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVIS 367
S + + + ++ +G +IG+ G+ I ++Q +G IK+ V G+ DR + I+
Sbjct: 232 TGMDASAQTSSHEMTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANPVDGSADRQVTIT 291
Query: 368 G 368
G
Sbjct: 292 G 292
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 88/157 (56%), Gaps = 11/157 (7%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTTAIFK- 70
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I+ ++ ++ + V R++V ++Q G L+GKGG I E+R+ +GA
Sbjct: 71 -AFSMIIEKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
+++ G D +P + E + I G +++ E + QI
Sbjct: 130 QVQVAG-DMLP---NSTERAITIAGTPQSIIECVKQI 162
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%)
Query: 593 VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLI 652
+ +P L+ I G G+ + +IRQ+S A+I I +P G+ + + I+G+P A+ LI
Sbjct: 245 MTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANPVDGSADRQVTITGSPASISLAEYLI 304
Query: 653 QAFVMSE 659
A + SE
Sbjct: 305 NARLSSE 311
Score = 38.9 bits (89), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 396 DNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVL 455
D QT + + ++ IGC++G+ GS I E+R++SGA I+I P S + +V
Sbjct: 235 DASAQTSSHEMTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIAN----PVDGSADRQVT- 289
Query: 456 INGEFEAVQEALFQITTRL 474
I G ++ A + I RL
Sbjct: 290 ITGSPASISLAEYLINARL 308
>gi|404351641|ref|NP_998156.3| heterogeneous nuclear ribonucleoprotein K [Danio rerio]
Length = 431
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 98/423 (23%), Positives = 157/423 (37%), Gaps = 98/423 (23%)
Query: 303 ESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDR 362
E R + + E++ R+L + G VIGKGG I++L+ + + V ++ SG E
Sbjct: 30 EEQAFKRSRNTDEMVELRVLLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDS-SGPERI 88
Query: 363 LIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQT-----VMTRLLVASNQIGCLL 417
L V SA D + + +I + + + + RLL+ + G ++
Sbjct: 89 LSV-----------SADIDTIGEILLKIIPTLEEYQHYSGTDFDCELRLLIHQSLAGGII 137
Query: 418 GKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHH 477
G G+ I E+R+ + I++ + C + VVL+ G+ E V E + I +
Sbjct: 138 GVKGAKIKELRENTQTTIKLFQE----CCPHSTDRVVLVGGKPERVVECIKVILELIAEA 193
Query: 478 FFRDAFPSINRPLNPTFLDQVSPFPSFI------GRRELSPPGMYSNFGPSFHKFDAV-- 529
+P +P F D+ + F GRR + M G FD +
Sbjct: 194 ----PIKGRAQPYDPNFYDETYDYGGFTMMYEERGRRPMGGFPMRGRGG-----FDRMPP 244
Query: 530 --GGPPPPGSFHPHDDHSA-----------------------------------FMHHIH 552
G P S +DD S F H +
Sbjct: 245 GRGSRSVPPSRRDYDDMSPRRGPPPPPPGRGGRGGSRARNLPLPPPPPPRGGDRFSHQSY 304
Query: 553 RPGMPPHMPDMK-------------------PWGPQGLMEVGGPMGFPDFVGPPHRRVPV 593
M D + W P + GG + D +G P V
Sbjct: 305 HSNMDDRPNDRRGRPGDRYESMSGGGYDNNSSWEP---FQSGGRGSYSD-IGGPVITTQV 360
Query: 594 VVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQ 653
+P+ L I G+ G +KQIR S A I I +P G+ + +I I+GT +Q AQ L+Q
Sbjct: 361 TIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQ 420
Query: 654 AFV 656
V
Sbjct: 421 NSV 423
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 50/107 (46%), Gaps = 13/107 (12%)
Query: 14 DDNHTEPNGKEKSQKLAGDYSENQPSKSFPGG------------IMFRVLCPVSKIDGVI 61
+D P + +S G Y N + F G I +V P +I
Sbjct: 313 NDRRGRPGDRYESMS-GGGYDNNSSWEPFQSGGRGSYSDIGGPVITTQVTIPKDLAGSII 371
Query: 62 GKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENL 108
GK G+ + QI ++G +I+++E + GS++R++ I + ++ + ++ L
Sbjct: 372 GKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYL 418
>gi|301771918|ref|XP_002921377.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
isoform 1 [Ailuropoda melanoleuca]
Length = 579
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 116/479 (24%), Positives = 189/479 (39%), Gaps = 128/479 (26%)
Query: 39 SKSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEAS 98
SK P + R+L P + +IGK+G + I++ T I
Sbjct: 189 SKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKI------------------- 229
Query: 99 DNKKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQK 158
+ R EN G E S+ L++ + TS K
Sbjct: 230 ------------DVHRKENAGAAEKSITI-------------------LSTPEGTSAACK 258
Query: 159 ALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDK---- 214
++L + + E D + T+ + L++L + VG L+GK G +K+I++
Sbjct: 259 SILEIMHK--------EAQDIKFTE--EIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDT 308
Query: 215 ------LPTCALASDE-VVQITGEVDTVRKALKLISHQLLDNSPRDHES-------IPG- 259
L L + E + + G V+T KA + I ++ ++ D S IPG
Sbjct: 309 KITISPLQELTLYNPERTITVKGNVETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGL 368
Query: 260 --NPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEIL 317
N G P + G P A M P P+F +S E
Sbjct: 369 NLNALGLFPPTSGMPPPTSGPPSA------------MTPPYPQFEQS----------ETE 406
Query: 318 TFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRI 376
T L VG +IGK G I+ L + G IK+ A + + R+++I+GP
Sbjct: 407 TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPP------ 460
Query: 377 SAPQDAVLRVQTRIARAIPD------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKL 430
+A + Q RI I + E + + V S G ++GKGG + E++ L
Sbjct: 461 ----EAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNL 516
Query: 431 SGAYIRILGKDQIPKCASENEEVVL-INGEFEAVQEA---LFQITTRLRHHFFRDAFPS 485
S A + ++ +DQ P EN++VV+ I G F A Q A + +I T+++ H + A S
Sbjct: 517 SSAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVKQHQQQKALQS 571
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 137/352 (38%), Gaps = 67/352 (19%)
Query: 311 KPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV--MEAVSGTEDRLIVISG 368
K P L RLL + VG +IGK GA IR++ ++T I V E E + ++S
Sbjct: 190 KQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILST 249
Query: 369 PAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMR 428
P + SA ++L + + A+ I E + ++L +N +G L+GK G + ++
Sbjct: 250 P----EGTSAACKSILEIMHKEAQDIKFTEE--IPLKILAHNNFVGRLIGKEGRNLKKIE 303
Query: 429 KLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINR 488
+ + I I ++ E + + G E +A +I ++R + D S+N
Sbjct: 304 QDTDTKITISPLQEL--TLYNPERTITVKGNVETCAKAEEEIMKKIRESYEND-IASMN- 359
Query: 489 PLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFM 548
L + PG+ N + F G PPP S P SA
Sbjct: 360 -LQAHLI-----------------PGLNLN---ALGLFPPTSGMPPPTSGPP----SAM- 393
Query: 549 HHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDG 608
PP +P F V + +P V I G+ G
Sbjct: 394 -------TPP---------------------YPQFEQSETETVHLFIPALSVGAIIGKQG 425
Query: 609 ACLKQIRQISDAKITITDPK-PGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
+KQ+ + + A I I + P A ++II+G PE AQ I + E
Sbjct: 426 QHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFKAQGRIYGKIKEE 477
>gi|73976012|ref|XP_539474.2| PREDICTED: insulin-like growth factor 2 mRNA binding protein 3
isoform 1 [Canis lupus familiaris]
Length = 579
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 117/479 (24%), Positives = 189/479 (39%), Gaps = 128/479 (26%)
Query: 39 SKSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEAS 98
SK P + R+L P + +IGK+G + I++ T I V
Sbjct: 189 SKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVH---------------- 232
Query: 99 DNKKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQK 158
R EN G E S+ L++ + TS K
Sbjct: 233 ---------------RKENAGAAEKSITI-------------------LSTPEGTSAACK 258
Query: 159 ALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDK---- 214
++L + + E D + T+ + L++L + VG L+GK G +K+I++
Sbjct: 259 SILEIMHK--------EAQDIKFTE--EIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDT 308
Query: 215 ------LPTCALASDE-VVQITGEVDTVRKALKLISHQLLDNSPRDHES-------IPG- 259
L L + E + + G V+T KA + I ++ ++ D S IPG
Sbjct: 309 KITISPLQELTLYNPERTITVKGNVETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGL 368
Query: 260 --NPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEIL 317
N G P + G P A M P P+F +S E
Sbjct: 369 NLNALGLFPPTSGMPPPTSGPPSA------------MTPPYPQFEQS----------ETE 406
Query: 318 TFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRI 376
T L VG +IGK G I+ L + G IK+ A + + R+++I+GP
Sbjct: 407 TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPP------ 460
Query: 377 SAPQDAVLRVQTRIARAIPD------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKL 430
+A + Q RI I + E + + V S G ++GKGG + E++ L
Sbjct: 461 ----EAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNL 516
Query: 431 SGAYIRILGKDQIPKCASENEEVVL-INGEFEAVQEA---LFQITTRLRHHFFRDAFPS 485
S A + ++ +DQ P EN++VV+ I G F A Q A + +I T+++ H + A S
Sbjct: 517 SSAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVKQHQQQKALQS 571
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 137/352 (38%), Gaps = 67/352 (19%)
Query: 311 KPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV--MEAVSGTEDRLIVISG 368
K P L RLL + VG +IGK GA IR++ ++T I V E E + ++S
Sbjct: 190 KQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILST 249
Query: 369 PAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMR 428
P + SA ++L + + A+ I E + ++L +N +G L+GK G + ++
Sbjct: 250 P----EGTSAACKSILEIMHKEAQDIKFTEE--IPLKILAHNNFVGRLIGKEGRNLKKIE 303
Query: 429 KLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINR 488
+ + I I ++ E + + G E +A +I ++R + D S+N
Sbjct: 304 QDTDTKITISPLQEL--TLYNPERTITVKGNVETCAKAEEEIMKKIRESYEND-IASMN- 359
Query: 489 PLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFM 548
L + PG+ N + F G PPP S P SA
Sbjct: 360 -LQAHLI-----------------PGLNLN---ALGLFPPTSGMPPPTSGPP----SAM- 393
Query: 549 HHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDG 608
PP +P F V + +P V I G+ G
Sbjct: 394 -------TPP---------------------YPQFEQSETETVHLFIPALSVGAIIGKQG 425
Query: 609 ACLKQIRQISDAKITITDPK-PGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
+KQ+ + + A I I + P A ++II+G PE AQ I + E
Sbjct: 426 QHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFKAQGRIYGKIKEE 477
>gi|410952454|ref|XP_003982895.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
isoform 1 [Felis catus]
Length = 579
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 117/479 (24%), Positives = 189/479 (39%), Gaps = 128/479 (26%)
Query: 39 SKSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEAS 98
SK P + R+L P + +IGK+G + I++ T I V
Sbjct: 189 SKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVH---------------- 232
Query: 99 DNKKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQK 158
R EN G E S+ L++ + TS K
Sbjct: 233 ---------------RKENAGAAEKSITI-------------------LSTPEGTSAACK 258
Query: 159 ALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDK---- 214
++L + + E D + T+ + L++L + VG L+GK G +K+I++
Sbjct: 259 SILEIMHK--------EAQDIKFTE--EIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDT 308
Query: 215 ------LPTCALASDE-VVQITGEVDTVRKALKLISHQLLDNSPRDHES-------IPG- 259
L L + E + + G V+T KA + I ++ ++ D S IPG
Sbjct: 309 KITISPLQELTLYNPERTITVKGNVETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGL 368
Query: 260 --NPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEIL 317
N G P + G P A M P P+F +S E
Sbjct: 369 NLNALGLFPPTSGMPPPTSGPPSA------------MTPPYPQFEQS----------ETE 406
Query: 318 TFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRI 376
T L VG +IGK G I+ L + G IK+ A + + R+++I+GP
Sbjct: 407 TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPP------ 460
Query: 377 SAPQDAVLRVQTRIARAIPD------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKL 430
+A + Q RI I + E + + V S G ++GKGG + E++ L
Sbjct: 461 ----EAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNL 516
Query: 431 SGAYIRILGKDQIPKCASENEEVVL-INGEFEAVQEA---LFQITTRLRHHFFRDAFPS 485
S A + ++ +DQ P EN++VV+ I G F A Q A + +I T+++ H + A S
Sbjct: 517 SSAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVKQHQQQKALQS 571
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 140/358 (39%), Gaps = 69/358 (19%)
Query: 305 GVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV--MEAVSGTEDR 362
G + + KP L RLL + VG +IGK GA IR++ ++T I V E E
Sbjct: 186 GSISKQKPCD--LPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKS 243
Query: 363 LIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGS 422
+ ++S P + SA ++L + + A+ I E + ++L +N +G L+GK G
Sbjct: 244 ITILSTP----EGTSAACKSILEIMHKEAQDIKFTEE--IPLKILAHNNFVGRLIGKEGR 297
Query: 423 IIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDA 482
+ ++ + + I I ++ E + + G E +A +I ++R + D
Sbjct: 298 NLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGNVETCAKAEEEIMKKIRESYEND- 354
Query: 483 FPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHD 542
S+N L + PG+ N + F G PPP S P
Sbjct: 355 IASMN--LQAHLI-----------------PGLNLN---ALGLFPPTSGMPPPTSGPP-- 390
Query: 543 DHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPI 602
SA PP +P F V + +P V
Sbjct: 391 --SAM--------TPP---------------------YPQFEQSETETVHLFIPALSVGA 419
Query: 603 IQGEDGACLKQIRQISDAKITITDPK-PGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
I G+ G +KQ+ + + A I I + P A ++II+G PE AQ I + E
Sbjct: 420 IIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFKAQGRIYGKIKEE 477
>gi|334188353|ref|NP_001190526.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|332008916|gb|AED96299.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 198
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 69/133 (51%), Gaps = 26/133 (19%)
Query: 311 KPSPEIL---TFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVIS 367
K PE + T+R+LCHD + GGVIGK G II+S++Q TG I V E V G +R+I IS
Sbjct: 59 KSHPETMATTTYRILCHDAKAGGVIGKSGTIIKSIRQHTGAWINVHELVPGDAERIIEIS 118
Query: 368 GPAH--PDDRI---SAPQDAVLRVQTRIARAI---------PDNREQ---------TVMT 404
PD R+ S Q+A+ V RI + P+ E V+T
Sbjct: 119 DNRRRDPDGRMPSFSPAQEALFSVHDRILESEAQFGYGGPPPEEEEDYGGVRPGGGRVVT 178
Query: 405 RLLVASNQIGCLL 417
RL+V+ +GCLL
Sbjct: 179 RLVVSRMHVGCLL 191
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 39/68 (57%), Gaps = 5/68 (7%)
Query: 38 PSKSFP---GGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVV 94
PSKS P +R+LC +K GVIGK G ++ I Q TG I V E V G ER +
Sbjct: 57 PSKSHPETMATTTYRILCHDAKAGGVIGKSGTIIKSIRQHTGAWINVHELVPGDAER--I 114
Query: 95 IEASDNKK 102
IE SDN++
Sbjct: 115 IEISDNRR 122
>gi|361123942|gb|EHK96076.1| putative RNA-binding protein rnc1 [Glarea lozoyensis 74030]
Length = 376
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 149/381 (39%), Gaps = 68/381 (17%)
Query: 293 PMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV 352
P+P + ++ ES LT R + + G +IGKGG + L+ ETGC V
Sbjct: 39 PLPKTDEEYAES-----------QLTLRAIVSSKEAGVIIGKGGKNVADLRDETGCKAGV 87
Query: 353 MEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVM--------- 403
+ V G DR++ I+G +A+ + +A+A+ + Q M
Sbjct: 88 SKVVQGVHDRVLTIAGGC----------EAISKAYAIVAKALLEGAPQMGMGGVVAQSGS 137
Query: 404 --TRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFE 461
+LL++ NQ+G ++G+ G I ++ +SG + + K+ +P+ E +V + G E
Sbjct: 138 HPIKLLISHNQMGTIIGRQGLKIKHIQDVSGVRM-VAQKEMLPQST---ERIVEVQGTPE 193
Query: 462 AVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQ--VSPFPSFIGRRELSPPGMYSNF 519
+Q+A+++I L + R + NP Q + SP G Y N
Sbjct: 194 GIQKAVWEICKCLVDDWQRGTGTVL---YNPVVRTQPGAAGGMGGGQALGGSPRGDYGNN 250
Query: 520 GPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMG 579
A P S++ S G P H
Sbjct: 251 RVMRTGNGADFSNEAPRSYNNRRSDSDAAQR----GPPTH-------------------- 286
Query: 580 FPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITIT-DPKPGATETVIII 638
D G + + +P +V I G G+ + +IR+ S A+I+I P E + I
Sbjct: 287 --DENGEELQTQNISIPSDMVGCIIGRAGSKISEIRKTSGARISIAKSPHDETGERMFTI 344
Query: 639 SGTPEQTHAAQSLIQAFVMSE 659
G+ + A L+ + +E
Sbjct: 345 MGSQKANETALYLLYENLEAE 365
>gi|383862493|ref|XP_003706718.1| PREDICTED: poly(rC)-binding protein 4-like isoform 1 [Megachile
rotundata]
Length = 466
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 85/167 (50%), Gaps = 29/167 (17%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RL+ + VG +IGK G I++ ++E+G I + + +R++ ++GP
Sbjct: 18 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTVTGPT------ 69
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT-------------VMTRLLVASNQIGCLLGKGGSI 423
+++ + T I + + Q + RL+V ++Q G L+GKGGS
Sbjct: 70 ----NSIFKAFTLICKKFEEWCSQFHDIQSGGGVPRPPITLRLIVPASQCGSLIGKGGSK 125
Query: 424 IAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
I E+R+++GA I++ + +P + E V I+G EA+ + ++ I
Sbjct: 126 IKEIREVTGASIQV-ASEMLP---NSTERAVTISGTSEAITQCIYHI 168
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Query: 392 RAIPDNREQTVMTR----LLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCA 447
R NR+Q + V + IGC++GKGG+ IAE+R++SGA IRI ++ +
Sbjct: 258 RTSNTNRQQPAANNQTHEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REG 315
Query: 448 SENEEVVLINGEFEAVQEALFQIT 471
+ + I G +AV A + I+
Sbjct: 316 GATDRTITITGNPDAVALAQYLIS 339
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 593 VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKP---GATETVIIISGTPEQTHAAQ 649
+ VP L+ I G+ G + +IRQIS A I I++ + GAT+ I I+G P+ AQ
Sbjct: 276 MTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVALAQ 335
Query: 650 SLIQAFV 656
LI V
Sbjct: 336 YLISMSV 342
>gi|395738667|ref|XP_003780758.1| PREDICTED: LOW QUALITY PROTEIN: insulin-like growth factor 2
mRNA-binding protein 3 [Pongo abelii]
Length = 567
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 116/479 (24%), Positives = 189/479 (39%), Gaps = 128/479 (26%)
Query: 39 SKSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEAS 98
SK P + R+L P + +IGK+G + I++ T I
Sbjct: 177 SKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKI------------------- 217
Query: 99 DNKKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQK 158
+ R EN G E S+ L++ + TS K
Sbjct: 218 ------------DVHRKENAGAAEKSITI-------------------LSTPEGTSAACK 246
Query: 159 ALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDK---- 214
++L + + E D + T+ + L++L + VG L+GK G +K+I++
Sbjct: 247 SILEIMHK--------EAQDIKFTE--EIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDT 296
Query: 215 ------LPTCALASDE-VVQITGEVDTVRKALKLISHQLLDNSPRDHES-------IPG- 259
L L + E + + G V+T KA + I ++ ++ D S IPG
Sbjct: 297 KITISPLQELTLYNPERTITVKGNVETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGL 356
Query: 260 --NPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEIL 317
N G P + G P A M P P+F +S E
Sbjct: 357 NLNALGLFPPTSGMPPPTSGPPSA------------MTPPYPQFEQS----------ETE 394
Query: 318 TFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRI 376
T L VG +IGK G I+ L + G IK+ A + + R+++I+GP
Sbjct: 395 TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPP------ 448
Query: 377 SAPQDAVLRVQTRIARAIPD------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKL 430
+A + Q RI I + E + + V S G ++GKGG + E++ L
Sbjct: 449 ----EAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNL 504
Query: 431 SGAYIRILGKDQIPKCASENEEVVL-INGEFEAVQEA---LFQITTRLRHHFFRDAFPS 485
S A + ++ +DQ P EN++VV+ I G F A Q A + +I T+++ H + A S
Sbjct: 505 SSAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVKQHQQQKALQS 559
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 137/352 (38%), Gaps = 67/352 (19%)
Query: 311 KPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV--MEAVSGTEDRLIVISG 368
K P L RLL + VG +IGK GA IR++ ++T I V E E + ++S
Sbjct: 178 KQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILST 237
Query: 369 PAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMR 428
P + SA ++L + + A+ I E + ++L +N +G L+GK G + ++
Sbjct: 238 P----EGTSAACKSILEIMHKEAQDIKFTEE--IPLKILAHNNFVGRLIGKEGRNLKKIE 291
Query: 429 KLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINR 488
+ + I I ++ E + + G E +A +I ++R + D S+N
Sbjct: 292 QDTDTKITISPLQEL--TLYNPERTITVKGNVETCAKAEEEIMKKIRESYEND-IASMN- 347
Query: 489 PLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFM 548
L + PG+ N + F G PPP S P SA
Sbjct: 348 -LQAHLI-----------------PGLNLN---ALGLFPPTSGMPPPTSGPP----SAM- 381
Query: 549 HHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDG 608
PP +P F V + +P V I G+ G
Sbjct: 382 -------TPP---------------------YPQFEQSETETVHLFIPALSVGAIIGKQG 413
Query: 609 ACLKQIRQISDAKITITDPK-PGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
+KQ+ + + A I I + P A ++II+G PE AQ I + E
Sbjct: 414 QHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFKAQGRIYGKIKEE 465
>gi|367043886|ref|XP_003652323.1| hypothetical protein THITE_2113686 [Thielavia terrestris NRRL 8126]
gi|346999585|gb|AEO65987.1| hypothetical protein THITE_2113686 [Thielavia terrestris NRRL 8126]
Length = 482
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 153/370 (41%), Gaps = 41/370 (11%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
+ R + VIGKGG + ++Q +G V + G +R++ +SG D +
Sbjct: 123 IHIRAVISSPEAATVIGKGGENVSKIRQMSGAKCTVSDYQKGAVERILTVSGIV---DAV 179
Query: 377 SAPQDAVLRVQTRIARAIPDNRE-QTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYI 435
+ ++R P N+ +T RLL+ IG ++GKGG+ I E+++ SGA
Sbjct: 180 AKAFGLIIRTLNNEPLNEPSNQHSKTYPLRLLIPHILIGSIIGKGGARIKEIQEASGA-- 237
Query: 436 RILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFL 495
R+ D ++E VV+ G +AV A + + + L P +
Sbjct: 238 RLNASDSCLPLSTERSLVVM--GVADAVHIATYYVGSTLLEQLNE----RFGGPAASAYA 291
Query: 496 DQV-SPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFH-PHDDHSAFMHHIH- 552
+ P + G ++ P G ++ + G P ++H P ++ H H
Sbjct: 292 TRSGGPAGTVPGGMQVVPYNPQPAGGNYGNRDNYYRGRQDPRAYHMPPQSYAPPYGHPHP 351
Query: 553 ---RPGMP--------------PHMP--DMKPWGPQGLMEVGGPMGFPDFVGPPHRRVP- 592
P +P PH+P P GP G GP G P G P
Sbjct: 352 AIPNPAVPMPYGAHAAGGYGAGPHVPVHHAGPAGPHGH---AGPHGQPMPGGAGMPGAPL 408
Query: 593 ---VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQ 649
+ +P +V I G+ G + +IRQIS + I I +P+ + E ++ I+GT E A
Sbjct: 409 TQQIYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQDNSNERLVTITGTEECNRIAL 468
Query: 650 SLIQAFVMSE 659
++ + + SE
Sbjct: 469 YMLYSRLESE 478
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 111/285 (38%), Gaps = 76/285 (26%)
Query: 156 VQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKL 215
V KA L+ R + EP E ++Q S + LRLL+ +G ++GKGG IK+I +
Sbjct: 179 VAKAFGLII-RTLNNEPLNEPSNQH---SKTYPLRLLIPHILIGSIIGKGGARIKEIQEA 234
Query: 216 PTCAL-ASDEVVQIT--------GEVDTVRKALKLISHQLLDN--------SPRDHESIP 258
L ASD + ++ G D V A + LL+ + + +
Sbjct: 235 SGARLNASDSCLPLSTERSLVVMGVADAVHIATYYVGSTLLEQLNERFGGPAASAYATRS 294
Query: 259 GNPTG---------PSHPLP--------DHSV-------------SSQGAPYATGHRDVA 288
G P G P +P P D+ S PY H +
Sbjct: 295 GGPAGTVPGGMQVVPYNPQPAGGNYGNRDNYYRGRQDPRAYHMPPQSYAPPYGHPHPAIP 354
Query: 289 DIHLPMP------------PSIPKFH--------ESGVLDRPKPSPE-----ILTFRLLC 323
+ +PMP P +P H +G +P P LT ++
Sbjct: 355 NPAVPMPYGAHAAGGYGAGPHVPVHHAGPAGPHGHAGPHGQPMPGGAGMPGAPLTQQIYI 414
Query: 324 HDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
++ VG +IGKGG I ++Q +G IK+ E + +RL+ I+G
Sbjct: 415 PNDMVGAIIGKGGQKINEIRQISGSVIKINEPQDNSNERLVTITG 459
Score = 39.3 bits (90), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Query: 11 PHDDDNHTEPNGKEKSQKLAGDYSENQPSKS-FPGG-IMFRVLCPVSKIDGVIGKDGEMM 68
PH +H P G AG + + P + PG + ++ P + +IGK G+ +
Sbjct: 374 PHVPVHHAGPAGPHGH---AGPHGQPMPGGAGMPGAPLTQQIYIPNDMVGAIIGKGGQKI 430
Query: 69 SQISQDTGVTIRVEETVSGSDERLVVIEASD 99
++I Q +G I++ E S+ERLV I ++
Sbjct: 431 NEIRQISGSVIKINEPQDNSNERLVTITGTE 461
>gi|338723967|ref|XP_001497902.3| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
[Equus caballus]
Length = 638
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 116/479 (24%), Positives = 188/479 (39%), Gaps = 127/479 (26%)
Query: 39 SKSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEAS 98
SK P + R+L P + +IGK+G + I++ T I
Sbjct: 247 SKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKI------------------- 287
Query: 99 DNKKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQK 158
+ R EN G E S+ L++ + TS K
Sbjct: 288 ------------DVHRKENAGAAEKSITI-------------------LSTPEGTSAACK 316
Query: 159 ALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDK---- 214
++L + + E D + T+ + L++L + VG L+GK G +K+I++
Sbjct: 317 SILEIMHK--------EAQDIKFTE--EIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDT 366
Query: 215 ------LPTCALASDE-VVQITGEVDTVRKALKLISHQLLDNSPRDHES-------IPG- 259
L L + E + I G V+T KA + I ++ ++ D S IPG
Sbjct: 367 KITISPLQELTLYNPERTITIKGNVETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGL 426
Query: 260 --NPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEIL 317
N G P + G P A M P P+F + E
Sbjct: 427 NLNALGLFPPTSGMPPPTSGPPSA------------MTPPYPQFEQQS---------ETE 465
Query: 318 TFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRI 376
T L VG +IGK G I+ L + G IK+ A + + R+++I+GP
Sbjct: 466 TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPP------ 519
Query: 377 SAPQDAVLRVQTRIARAIPD------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKL 430
+A + Q RI I + E + + V S G ++GKGG + E++ L
Sbjct: 520 ----EAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNL 575
Query: 431 SGAYIRILGKDQIPKCASENEEVVL-INGEFEAVQEA---LFQITTRLRHHFFRDAFPS 485
S A + ++ +DQ P EN++VV+ I G F A Q A + +I T+++ H + A S
Sbjct: 576 SSAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVKQHQQQKALQS 630
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 136/353 (38%), Gaps = 66/353 (18%)
Query: 311 KPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV--MEAVSGTEDRLIVISG 368
K P L RLL + VG +IGK GA IR++ ++T I V E E + ++S
Sbjct: 248 KQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILST 307
Query: 369 PAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMR 428
P + SA ++L + + A+ I E + ++L +N +G L+GK G + ++
Sbjct: 308 P----EGTSAACKSILEIMHKEAQDIKFTEE--IPLKILAHNNFVGRLIGKEGRNLKKIE 361
Query: 429 KLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINR 488
+ + I I ++ E + I G E +A +I ++R + D S+N
Sbjct: 362 QDTDTKITISPLQEL--TLYNPERTITIKGNVETCAKAEEEIMKKIRESYEND-IASMN- 417
Query: 489 PLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFM 548
L + PG+ N + F G PPP S P
Sbjct: 418 -LQAHLI-----------------PGLNLN---ALGLFPPTSGMPPPTSGPPS------- 449
Query: 549 HHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDG 608
M P P + Q E V + +P V I G+ G
Sbjct: 450 ------AMTPPYPQFE---QQSETET----------------VHLFIPALSVGAIIGKQG 484
Query: 609 ACLKQIRQISDAKITITDPK-PGATETVIIISGTPEQTHAAQSLIQAFVMSET 660
+KQ+ + + A I I + P A ++II+G PE AQ I + E
Sbjct: 485 QHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFKAQGRIYGKIKEEN 537
>gi|332242549|ref|XP_003270447.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
isoform 1 [Nomascus leucogenys]
Length = 579
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 117/479 (24%), Positives = 189/479 (39%), Gaps = 128/479 (26%)
Query: 39 SKSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEAS 98
SK P + R+L P + +IGK+G + I++ T I V
Sbjct: 189 SKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVH---------------- 232
Query: 99 DNKKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQK 158
R EN G E S+ L++ + TS K
Sbjct: 233 ---------------RKENAGAAEKSITI-------------------LSTPEGTSAACK 258
Query: 159 ALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDK---- 214
++L + + E D + T+ + L++L + VG L+GK G +K+I++
Sbjct: 259 SILEIMHK--------EAQDIKFTE--EIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDT 308
Query: 215 ------LPTCALASDE-VVQITGEVDTVRKALKLISHQLLDNSPRDHES-------IPG- 259
L L + E + + G V+T KA + I ++ ++ D S IPG
Sbjct: 309 KITISPLQELTLYNPERTITVKGSVETCAKAEEEIMKKIRESYENDIASMNVQTHLIPGL 368
Query: 260 --NPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEIL 317
N G P + G P A M P P+F +S E
Sbjct: 369 NLNDLGLFPPTSGMPPPTSGPPSA------------MTPPYPQFEQS----------ETE 406
Query: 318 TFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRI 376
T L VG +IGK G I+ L + G IK+ A + + R+++I+GP
Sbjct: 407 TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPP------ 460
Query: 377 SAPQDAVLRVQTRIARAIPD------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKL 430
+A + Q RI I + E + + V S G ++GKGG + E++ L
Sbjct: 461 ----EAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNL 516
Query: 431 SGAYIRILGKDQIPKCASENEEVVL-INGEFEAVQEA---LFQITTRLRHHFFRDAFPS 485
S A + ++ +DQ P EN++VV+ I G F A Q A + +I T+++ H + A S
Sbjct: 517 SSAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVKQHQQQKALQS 571
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 138/358 (38%), Gaps = 69/358 (19%)
Query: 305 GVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV--MEAVSGTEDR 362
G L + KP L RLL + VG +IGK GA IR++ ++T I V E E
Sbjct: 186 GSLSKQKPCD--LPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKS 243
Query: 363 LIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGS 422
+ ++S P + SA ++L + + A+ I E + ++L +N +G L+GK G
Sbjct: 244 ITILSTP----EGTSAACKSILEIMHKEAQDIKFTEE--IPLKILAHNNFVGRLIGKEGR 297
Query: 423 IIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDA 482
+ ++ + + I I ++ E + + G E +A +I ++R + D
Sbjct: 298 NLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGSVETCAKAEEEIMKKIRESYEND- 354
Query: 483 FPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHD 542
S+N + PG+ N F G PPP S P
Sbjct: 355 IASMNVQTHLI-------------------PGLNLN---DLGLFPPTSGMPPPTSGPP-- 390
Query: 543 DHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPI 602
SA PP +P F V + +P V
Sbjct: 391 --SAM--------TPP---------------------YPQFEQSETETVHLFIPALSVGA 419
Query: 603 IQGEDGACLKQIRQISDAKITITDPK-PGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
I G+ G +KQ+ + + A I I + P A ++II+G PE AQ I + E
Sbjct: 420 IIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFKAQGRIYGKIKEE 477
>gi|66910286|gb|AAH96867.1| Heterogeneous nuclear ribonucleoprotein K, like [Danio rerio]
gi|182889168|gb|AAI64732.1| Hnrpkl protein [Danio rerio]
Length = 431
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 98/423 (23%), Positives = 157/423 (37%), Gaps = 98/423 (23%)
Query: 303 ESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDR 362
E R + + E++ R+L + G VIGKGG I++L+ + + V ++ SG E
Sbjct: 30 EEQAFKRSRNTDEMVELRVLLRSKNAGAVIGKGGKNIKALRTDYNASVSVPDS-SGPERI 88
Query: 363 LIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQT-----VMTRLLVASNQIGCLL 417
L V SA D + + +I + + + + RLL+ + G ++
Sbjct: 89 LSV-----------SADIDTIGEILLKIIPTLEEYQHYSGTDFDCELRLLIHQSLAGGII 137
Query: 418 GKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHH 477
G G+ I E+R+ + I++ + C + VVL+ G+ E V E + I +
Sbjct: 138 GVKGAKIKELRENTQTTIKLFQE----CCPHSTDRVVLVGGKPERVVECIKVILELIAEA 193
Query: 478 FFRDAFPSINRPLNPTFLDQVSPFPSFI------GRRELSPPGMYSNFGPSFHKFDAV-- 529
+P +P F D+ + F GRR + M G FD +
Sbjct: 194 ----PIKGRAQPYDPNFYDETYDYGGFTMMYEERGRRPMGGFPMRGRGG-----FDRMPP 244
Query: 530 --GGPPPPGSFHPHDDHSA-----------------------------------FMHHIH 552
G P S +DD S F H +
Sbjct: 245 GRGSRSVPPSRRDYDDMSPRRGPPPPPPGRGGRGGSRARNLPLPPPPPPRGGDRFSHQSY 304
Query: 553 RPGMPPHMPDMK-------------------PWGPQGLMEVGGPMGFPDFVGPPHRRVPV 593
M D + W P + GG + D +G P V
Sbjct: 305 HSNMDDRPNDRRGRPGDRYESMSGGGYDNNSSWEP---FQSGGRGSYSD-IGGPVITTQV 360
Query: 594 VVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQ 653
+P+ L I G+ G +KQIR S A I I +P G+ + +I I+GT +Q AQ L+Q
Sbjct: 361 TIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQ 420
Query: 654 AFV 656
V
Sbjct: 421 NSV 423
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 50/107 (46%), Gaps = 13/107 (12%)
Query: 14 DDNHTEPNGKEKSQKLAGDYSENQPSKSFPGG------------IMFRVLCPVSKIDGVI 61
+D P + +S G Y N + F G I +V P +I
Sbjct: 313 NDRRGRPGDRYESMS-GGGYDNNSSWEPFQSGGRGSYSDIGGPVITTQVTIPKDLAGSII 371
Query: 62 GKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENL 108
GK G+ + QI ++G +I+++E + GS++R++ I + ++ + ++ L
Sbjct: 372 GKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYL 418
>gi|296087074|emb|CBI33448.3| unnamed protein product [Vitis vinifera]
Length = 333
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 74/133 (55%), Gaps = 11/133 (8%)
Query: 338 IIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHP----DDR---ISAPQDAVLRVQTRI 390
II+ L+ +T I++ E VS E+ ++ I + DD +S QDA+ RV ++
Sbjct: 9 IIKQLRVDTKFKIRIDETVSRCEELVVTIYNFSDETNAFDDSYTFVSPTQDALFRVHDKV 68
Query: 391 A--RAIPDNREQT--VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKC 446
+ ++ E+ V +LLV S+QIGC++GKGG II + SGA I IL D + C
Sbjct: 69 VSEKVHSEDFEEASQVTVQLLVTSDQIGCVIGKGGQIIQNIYSESGAQIYILKNDHLLSC 128
Query: 447 ASENEEVVLINGE 459
A +E+V I+GE
Sbjct: 129 ALSFDELVQISGE 141
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 129/323 (39%), Gaps = 99/323 (30%)
Query: 66 EMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASV 125
E++ Q+ DT IR++ETVS +E +V I N +E +
Sbjct: 8 EIIKQLRVDTKFKIRIDETVSRCEELVVTI---------------------YNFSDETNA 46
Query: 126 ADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSS 185
D+S S Q AL V +++V +V ++ ++S
Sbjct: 47 FDDSYTF--------------------VSPTQDALFRVHDKVVS----EKVHSEDFEEAS 82
Query: 186 KFVLRLLVLSTQVGCLLGKGGCVIKQI-------------DKLPTCALASDEVVQITGEV 232
+ ++LLV S Q+GC++GKGG +I+ I D L +CAL+ DE+VQI+GE
Sbjct: 83 QVTVQLLVTSDQIGCVIGKGGQIIQNIYSESGAQIYILKNDHLLSCALSFDELVQISGER 142
Query: 233 DTV-RKALKL------ISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHR 285
+ R +KL I H L P + S G+ G S D S S P
Sbjct: 143 PLLGRLFIKLHLFFMIIQHLLASIVPIGYSS-GGSLIGDS---GDWSRSLYSVP------ 192
Query: 286 DVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQE 345
R + S + + RL+C G+ GKG II ++ E
Sbjct: 193 -----------------------RDEASSKEFSLRLVCPIGNTSGMFGKGSVIINQIRWE 229
Query: 346 TGCDIKV-MEAVSGTEDRLIVIS 367
IKV +V+ D L+ IS
Sbjct: 230 FRAIIKVDSTSVAEAYDCLVTIS 252
>gi|346324545|gb|EGX94142.1| KH domain RNA-binding protein [Cordyceps militaris CM01]
Length = 420
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 144/363 (39%), Gaps = 67/363 (18%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT R + + G +IGKGG + L+ ETG V + V G DR++ I+G
Sbjct: 47 LTLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTITGGC------ 100
Query: 377 SAPQDAVLRVQTRIARAIPDNREQTVM-----------TRLLVASNQIGCLLGKGGSIIA 425
DA+ R +ARA+ + M +LL++ NQ+G ++G+ G I
Sbjct: 101 ----DAISRAYAIVARALLEGAPAMGMGGVVQGNGTHPIKLLISHNQMGTVIGRQGLKIK 156
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPS 485
++ +SG + + K+ +P+ E +V + G E +Q AL++I L + R
Sbjct: 157 HIQDVSGVRM-VAQKEMLPQS---TERIVEVQGTPEGIQRALWEICKCLVDDWQRGTGTV 212
Query: 486 INRPLNPT---FLDQVSPFPSFIG----RRELSPPG-MYSNFGPSFHKFDAVGGPPPPGS 537
+ P+ T SF R E S P M + G F GG P S
Sbjct: 213 LYNPVVRTQAGTTGSTGSTGSFAATGNTRAEYSTPRVMRTGNGSDFSN----GGGSRPFS 268
Query: 538 FHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPR 597
D ++ G P H D G + + +P
Sbjct: 269 RRSDSDAAS-------RGPPTH----------------------DENGEEIQTQNISIPA 299
Query: 598 SLVPIIQGEDGACLKQIRQISDAKITITD-PKPGATETVIIISGTPEQTHAAQSLIQAFV 656
+V I G G+ + +IR+ S A+I+I P E + I GT + +A L+ +
Sbjct: 300 DMVGCIIGRAGSKISEIRKTSGARISIAKAPHDETGERMFTIMGTAKANESALFLLYENL 359
Query: 657 MSE 659
+E
Sbjct: 360 EAE 362
>gi|348537598|ref|XP_003456280.1| PREDICTED: poly(rC)-binding protein 4-like [Oreochromis niloticus]
Length = 593
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 85/167 (50%), Gaps = 27/167 (16%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+ I + E +R+I I+GP
Sbjct: 128 LTLRLLMHGKEVGSIIGKKGETVKRIREESSARINISEG--SCPERIITITGPT------ 179
Query: 377 SAPQDAVLRVQTRIA-------RAIPDNREQT----VMTRLLVASNQIGCLLGKGGSIIA 425
D V R T I A+ N T V RL++ ++Q G L+GKGGS I
Sbjct: 180 ----DCVFRAFTMITFKLEEDLMALVANGTVTSKPPVTLRLVIPASQCGSLIGKGGSKIK 235
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITT 472
E+R+ +GA +++ G D +P + E V I+G +A+ + + I T
Sbjct: 236 EIRETTGAQVQVAG-DLLP---NSTEREVTISGSQDAIIQCVKLICT 278
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 105/242 (43%), Gaps = 59/242 (24%)
Query: 176 VADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI------------DKLPTCALASD 223
VA+ T LRL++ ++Q G L+GKGG IK+I D LP +++
Sbjct: 201 VANGTVTSKPPVTLRLVIPASQCGSLIGKGGSKIKEIRETTGAQVQVAGDLLPN---STE 257
Query: 224 EVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGP------------------S 265
V I+G D + + +KLI +L++ P+ +IP P+ S
Sbjct: 258 REVTISGSQDAIIQCVKLICTVILESPPKG-ATIPYRPSPTPGTVLLAGNQVFEASDFGS 316
Query: 266 HPLPDHSVSSQG----------APYATGHRDVADIH---------LPMPPSIPKFHESGV 306
HPL SV+ G + Y H ++A +H P+ S + GV
Sbjct: 317 HPL--FSVAQGGVDLQQTYAVQSHYGIPHSELAKLHQLSMQQQGLAPISQSATQVLPGGV 374
Query: 307 LDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVI 366
+ + + + LL ++ +G +IG+ G I ++Q +G IK+ + T DR + I
Sbjct: 375 ----EANSQTTSQELLIPNDLIGSIIGRQGTKINEIRQVSGAQIKIGSQIDSTSDRHVTI 430
Query: 367 SG 368
SG
Sbjct: 431 SG 432
>gi|344270303|ref|XP_003406985.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
[Loxodonta africana]
Length = 492
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 117/479 (24%), Positives = 189/479 (39%), Gaps = 128/479 (26%)
Query: 39 SKSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEAS 98
SK P + R+L P + +IGK+G + I++ T I V
Sbjct: 102 SKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVH---------------- 145
Query: 99 DNKKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQK 158
R EN G E S+ L++ + TS K
Sbjct: 146 ---------------RKENAGAAEKSITI-------------------LSTPEGTSAACK 171
Query: 159 ALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDK---- 214
++L + + E D + T+ + L++L + VG L+GK G +K+I++
Sbjct: 172 SILEIMHK--------EAQDIKFTE--EIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDT 221
Query: 215 ------LPTCALASDE-VVQITGEVDTVRKALKLISHQLLDNSPRDHES-------IPG- 259
L L + E + + G V+T KA + I ++ ++ D S IPG
Sbjct: 222 KITISPLQELTLYNPERTITVKGSVETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGL 281
Query: 260 --NPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEIL 317
N G P + G P A M P P+F +S E
Sbjct: 282 NLNALGLFPPTSGMPPPTSGPPSA------------MTPPYPQFEQS----------ETE 319
Query: 318 TFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRI 376
T L VG +IGK G I+ L + G IK+ A + + R+++I+GP
Sbjct: 320 TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPP------ 373
Query: 377 SAPQDAVLRVQTRIARAIPD------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKL 430
+A + Q RI I + E + + V S G ++GKGG + E++ L
Sbjct: 374 ----EAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNL 429
Query: 431 SGAYIRILGKDQIPKCASENEEVVL-INGEFEAVQEA---LFQITTRLRHHFFRDAFPS 485
S A + ++ +DQ P EN++VV+ I G F A Q A + +I T+++ H + A S
Sbjct: 430 SSAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVKQHQQQKALQS 484
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 137/352 (38%), Gaps = 67/352 (19%)
Query: 311 KPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV--MEAVSGTEDRLIVISG 368
K P L RLL + VG +IGK GA IR++ ++T I V E E + ++S
Sbjct: 103 KQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILST 162
Query: 369 PAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMR 428
P + SA ++L + + A+ I E + ++L +N +G L+GK G + ++
Sbjct: 163 P----EGTSAACKSILEIMHKEAQDIKFTEE--IPLKILAHNNFVGRLIGKEGRNLKKIE 216
Query: 429 KLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINR 488
+ + I I ++ E + + G E +A +I ++R + D S+N
Sbjct: 217 QDTDTKITISPLQEL--TLYNPERTITVKGSVETCAKAEEEIMKKIRESYEND-IASMN- 272
Query: 489 PLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFM 548
L + PG+ N + F G PPP S P SA
Sbjct: 273 -LQAHLI-----------------PGLNLN---ALGLFPPTSGMPPPTSGPP----SAM- 306
Query: 549 HHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDG 608
PP +P F V + +P V I G+ G
Sbjct: 307 -------TPP---------------------YPQFEQSETETVHLFIPALSVGAIIGKQG 338
Query: 609 ACLKQIRQISDAKITITDPK-PGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
+KQ+ + + A I I + P A ++II+G PE AQ I + E
Sbjct: 339 QHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFKAQGRIYGKIKEE 390
>gi|410952458|ref|XP_003982897.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
isoform 3 [Felis catus]
Length = 441
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 155/363 (42%), Gaps = 75/363 (20%)
Query: 163 VFERMVEVEPETEVADQENTKSSK--------FVLRLLVLSTQVGCLLGKGGCVIKQIDK 214
V E +V ++E A T SSK L++L + VG L+GK G +K+I++
Sbjct: 106 VVESCEQVNTDSETAVVNVTYSSKDQARHTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQ 165
Query: 215 ----------LPTCALASDE-VVQITGEVDTVRKALKLISHQLLDNSPRDHES------- 256
L L + E + + G V+T KA + I ++ ++ D S
Sbjct: 166 DTDTKITISPLQELTLYNPERTITVKGNVETCAKAEEEIMKKIRESYENDIASMNLQAHL 225
Query: 257 IPG---NPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPS 313
IPG N G P + G P A M P P+F ++
Sbjct: 226 IPGLNLNALGLFPPTSGMPPPTSGPPSA------------MTPPYPQFEQA--------- 264
Query: 314 PEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHP 372
PE T L VG +IGK G I+ L + G IK+ A + + R+++I+GP
Sbjct: 265 PETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPP-- 322
Query: 373 DDRISAPQDAVLRVQTRIARAIPD------NREQTVMTRLLVASNQIGCLLGKGGSIIAE 426
+A + Q RI I + E + + V S G ++GKGG + E
Sbjct: 323 --------EAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNE 374
Query: 427 MRKLSGAYIRILGKDQIPKCASENEEVVL-INGEFEAVQEA---LFQITTRLRHHFFRDA 482
++ LS A + ++ +DQ P EN++VV+ I G F A Q A + +I T+++ H + A
Sbjct: 375 LQNLSSAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVKQHQQQKA 430
Query: 483 FPS 485
S
Sbjct: 431 LQS 433
>gi|322698395|gb|EFY90165.1| KH domain RNA-binding protein [Metarhizium acridum CQMa 102]
Length = 367
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 146/365 (40%), Gaps = 77/365 (21%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT R + + G +IGKGG + L+ ETG V + V G DR++ I+G
Sbjct: 47 LTLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTITGEC------ 100
Query: 377 SAPQDAVLRVQTRIARAIPDNREQTVM---------------TRLLVASNQIGCLLGKGG 421
DA+ R +ARA+ + M +LL++ NQ+G ++G+ G
Sbjct: 101 ----DAISRAYAIVARALLEGAPAMGMGGIVQSNGTHLSSTAIKLLISHNQMGTIIGRQG 156
Query: 422 SIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRD 481
I ++ +SG + + K+ +P+ E +V + G + +Q A+++I L + R
Sbjct: 157 LKIKHIQDVSGVRM-VAQKEMLPQS---TERIVEVQGTPDGIQRAVWEICKCLVDDWQRG 212
Query: 482 AFPSINRPLNPTFLDQV------SPFPSFIGRREL-SPPGMYSNFGPSFHKFDAVGGPPP 534
+ NP Q S + + GR + SP M + G F GG P
Sbjct: 213 TGTVL---YNPVVRTQAGSGGLGSNYNNGGGRSDYGSPRVMRTGNGADFSN----GGVRP 265
Query: 535 PGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVV 594
F D A G P H D G + +
Sbjct: 266 ---FSRRSDSDAASR-----GPPTH----------------------DENGEEIQTQNIS 295
Query: 595 VPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQA 654
+P +V I G G+ + +IR+ S A+I+I K G E + I GT + +A L+
Sbjct: 296 IPADMVGCIIGRAGSKISEIRKTSGARISIA--KTG--ERMFTIMGTAKANESALFLLYE 351
Query: 655 FVMSE 659
+ +E
Sbjct: 352 NLEAE 356
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 102/249 (40%), Gaps = 30/249 (12%)
Query: 152 ETSKVQKALLLVFERMVEVEPETE---VADQENTKSSKFVLRLLVLSTQVGCLLGKGGCV 208
E + +A +V ++E P + T S ++LL+ Q+G ++G+ G
Sbjct: 99 ECDAISRAYAIVARALLEGAPAMGMGGIVQSNGTHLSSTAIKLLISHNQMGTIIGRQGLK 158
Query: 209 IKQIDKLPTCAL---------ASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPG 259
IK I + + +++ +V++ G D +++A+ I L+D+ R ++
Sbjct: 159 IKHIQDVSGVRMVAQKEMLPQSTERIVEVQGTPDGIQRAVWEICKCLVDDWQRGTGTVLY 218
Query: 260 NPT----GPSHPLPDH-----SVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRP 310
NP S L + S G+P + AD + +S R
Sbjct: 219 NPVVRTQAGSGGLGSNYNNGGGRSDYGSPRVMRTGNGADFSNGGVRPFSRRSDSDAASRG 278
Query: 311 KPS-----PEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIV 365
P+ EI T + + VG +IG+ G+ I +++ +G I + + T +R+
Sbjct: 279 PPTHDENGEEIQTQNISIPADMVGCIIGRAGSKISEIRKTSGARISIAK----TGERMFT 334
Query: 366 ISGPAHPDD 374
I G A ++
Sbjct: 335 IMGTAKANE 343
>gi|332019831|gb|EGI60292.1| Poly(rC)-binding protein 3 [Acromyrmex echinatior]
Length = 566
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 85/172 (49%), Gaps = 34/172 (19%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RL+ + VG +IGK G I++ ++E+G I + + +R++ ++GP
Sbjct: 18 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTVTGPT------ 69
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT------------------VMTRLLVASNQIGCLLG 418
+++ + T I + + Q + RL+V ++Q G L+G
Sbjct: 70 ----NSIFKAFTLICKKFEEWCSQFHDVPGSGAGGGGGVSRPPITLRLIVPASQCGSLIG 125
Query: 419 KGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
KGGS I E+R+++GA I++ + +P + E V I+G EA+ + ++ I
Sbjct: 126 KGGSKIKEIREVTGASIQV-ASEMLP---NSTERAVTISGTSEAITQCIYHI 173
Score = 45.8 bits (107), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 6/78 (7%)
Query: 397 NREQTVMTR----LLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEE 452
NR+Q + V + IGC++GKGG+ IAE+R++SGA IRI ++ + +
Sbjct: 362 NRQQPAANNQTHEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGATDR 419
Query: 453 VVLINGEFEAVQEALFQI 470
+ I G +AV A + I
Sbjct: 420 TITITGNPDAVALAQYLI 437
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 593 VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKP---GATETVIIISGTPEQTHAAQ 649
+ VP L+ I G+ G + +IRQIS A I I++ + GAT+ I I+G P+ AQ
Sbjct: 375 MTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVALAQ 434
Query: 650 SLIQAFV 656
LI V
Sbjct: 435 YLINMSV 441
Score = 39.3 bits (90), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 56/117 (47%), Gaps = 14/117 (11%)
Query: 187 FVLRLLVLSTQVGCLLGKGGCVIKQIDKLPTCAL---------ASDEVVQITGEVDTVRK 237
LRL+V ++Q G L+GKGG IK+I ++ ++ +++ V I+G + + +
Sbjct: 109 ITLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASEMLPNSTERAVTISGTSEAITQ 168
Query: 238 ALKLISHQLLDNSPRDHESIPGNPT----GPSHPLPDHSVSSQGAPYATGHRDVADI 290
+ I +L++ P+ +IP P GP + + QG H DV+ +
Sbjct: 169 CIYHICCVMLESPPKG-ATIPYRPKPQVGGPVILAGGQAYTIQGNYAVPAHSDVSTV 224
>gi|345497208|ref|XP_001599286.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Nasonia vitripennis]
Length = 643
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 151/323 (46%), Gaps = 44/323 (13%)
Query: 175 EVADQE--NTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI----DKLPTCALASD----- 223
EV QE NT + L++L + +G ++GKGG IK+I D T + +D
Sbjct: 254 EVMHQEASNTNKGEITLKILAHNNLIGRIIGKGGNTIKRIMQDTDTKITVSSINDINSFN 313
Query: 224 --EVVQITGEVDTVRKALKLISHQLLDNSPRDHESI-PGNPTGPS-HPLPDHSVSSQG-- 277
++ + G ++ + KA +IS++L + D +++ P + P HP+ S +S G
Sbjct: 314 LERIITVKGSIENMSKAEAMISNKLRQSYENDLQAMAPQSMMFPGLHPMAMMSTASMGYN 373
Query: 278 ----APYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIG 333
A Y TG P P + GVL + TF L + VG +IG
Sbjct: 374 SRGPALYGTGP-------APYPYQSNLTPQQGVL---TSDAQETTF-LYIPNNSVGAIIG 422
Query: 334 KGGAIIRSLKQETGCDIKV--ME----AVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQ 387
G+ IR++ + +G +K+ +E A TE ++ ++ P+ + A ++ +
Sbjct: 423 TKGSHIRNIIRFSGASVKIAPLESDKPAEQQTERKVTIV---GSPESQWKA--QYLIFEK 477
Query: 388 TRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCA 447
R + + + +LV S Q+G ++GKGG + E+++++G+ I++ + P A
Sbjct: 478 MREEGFVSGTEDVRLTVEILVPSAQVGRIIGKGGQNVRELQRVTGSVIKLSEQQATPPTA 537
Query: 448 SENEEVVLINGEFEAVQEALFQI 470
E E V I G F +VQ A +I
Sbjct: 538 DE-ETTVHIIGPFFSVQSAQRRI 559
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 139/342 (40%), Gaps = 65/342 (19%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRIS 377
R+L + VG +IG+ G+ IR + Q T + V + G+ ++ I I G +P++ +
Sbjct: 190 LRILVQSDMVGAIIGRQGSTIRQITQMTRARVDVHRKDNLGSLEKAITIYG--NPENCTN 247
Query: 378 APQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRI 437
A + +L V + A + + + ++L +N IG ++GKGG+ I + + + I +
Sbjct: 248 ACKK-ILEVMHQEA---SNTNKGEITLKILAHNNLIGRIIGKGGNTIKRIMQDTDTKITV 303
Query: 438 LGKDQIPKCASEN-EEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLD 496
I S N E ++ + G E + +A I+ +LR + D + + P
Sbjct: 304 ---SSINDINSFNLERIITVKGSIENMSKAEAMISNKLRQSYENDL-----QAMAP---- 351
Query: 497 QVSPFPSFIGRRELSPPGM-YSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPG 555
Q FP +S M Y++ GP+ + GP P
Sbjct: 352 QSMMFPGLHPMAMMSTASMGYNSRGPALYGT----GPAP--------------------- 386
Query: 556 MPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIR 615
P+ ++ P QG++ + +P + V I G G+ ++ I
Sbjct: 387 -YPYQSNLTPQ--QGVL-----------TSDAQETTFLYIPNNSVGAIIGTKGSHIRNII 432
Query: 616 QISDAKITIT-----DPKPGATETVIIISGTPEQTHAAQSLI 652
+ S A + I P TE + I G+PE AQ LI
Sbjct: 433 RFSGASVKIAPLESDKPAEQQTERKVTIVGSPESQWKAQYLI 474
>gi|440636503|gb|ELR06422.1| hypothetical protein GMDG_02138 [Geomyces destructans 20631-21]
Length = 365
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 137/348 (39%), Gaps = 60/348 (17%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT R + + G +IGK G + L+ ETG V + V G DR++ I+G
Sbjct: 48 LTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRILTITGGC------ 101
Query: 377 SAPQDAVLRVQTRIARAIPDNREQTVM-----------TRLLVASNQIGCLLGKGGSIIA 425
DA+ + +A+A+ + M +LL++ NQ+G ++G+ G I
Sbjct: 102 ----DAISKAYAIVAKALLEGAPMMGMGGLVSTTGTHPIKLLISHNQMGTIIGRQGLKIK 157
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPS 485
++ SG + + K+ +P+ E +V + G E +Q+A++++ L + R
Sbjct: 158 HIQDASGVRM-VAQKEMLPQS---TERIVEVQGTPEGIQKAIWEMCKCLIDDWERGTGTV 213
Query: 486 INRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHS 545
+ P+ T GR SP M + G F + P +F+ D
Sbjct: 214 LYNPVVRTQTGGGQGGIRNEGREYSSPRVMRTGNGADFSQ-------EAPRTFNRRSDGE 266
Query: 546 AFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQG 605
G+P H D G + + +P +V I G
Sbjct: 267 TAGR-----GVPTH----------------------DENGEEIQTQNISIPSDMVGCIIG 299
Query: 606 EDGACLKQIRQISDAKITITD-PKPGATETVIIISGTPEQTHAAQSLI 652
G+ + +IR+ S A+I+I P E + I G+ + A L+
Sbjct: 300 RGGSKISEIRKTSGARISIAKAPHDDTGERMFTIMGSAKANETALYLL 347
Score = 45.8 bits (107), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 106/241 (43%), Gaps = 25/241 (10%)
Query: 156 VQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKL 215
+ KA +V + ++E P + +T + ++LL+ Q+G ++G+ G IK I
Sbjct: 104 ISKAYAIVAKALLEGAPMMGMGGLVSTTGT-HPIKLLISHNQMGTIIGRQGLKIKHIQDA 162
Query: 216 PTCAL---------ASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPT-GPS 265
+ +++ +V++ G + ++KA+ + L+D+ R ++ NP
Sbjct: 163 SGVRMVAQKEMLPQSTERIVEVQGTPEGIQKAIWEMCKCLIDDWERGTGTVLYNPVVRTQ 222
Query: 266 HPLPDHSVSSQGAPYA------TGHRDVADIHLPMPPSIPKFHESGVLDRPKPS-----P 314
+ ++G Y+ TG+ AD P + + + R P+
Sbjct: 223 TGGGQGGIRNEGREYSSPRVMRTGNG--ADFSQEAPRTFNRRSDGETAGRGVPTHDENGE 280
Query: 315 EILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA-VSGTEDRLIVISGPAHPD 373
EI T + + VG +IG+GG+ I +++ +G I + +A T +R+ I G A +
Sbjct: 281 EIQTQNISIPSDMVGCIIGRGGSKISEIRKTSGARISIAKAPHDDTGERMFTIMGSAKAN 340
Query: 374 D 374
+
Sbjct: 341 E 341
Score = 42.4 bits (98), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 7/93 (7%)
Query: 391 ARAIP---DNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCA 447
R +P +N E+ + + S+ +GC++G+GGS I+E+RK SGA I I + P
Sbjct: 269 GRGVPTHDENGEEIQTQNISIPSDMVGCIIGRGGSKISEIRKTSGARISIA---KAPHDD 325
Query: 448 SENEEVVLINGEFEAVQEALFQITTRLRHHFFR 480
+ E + I G +A + AL+ + L R
Sbjct: 326 T-GERMFTIMGSAKANETALYLLYENLEGEKMR 357
>gi|432112571|gb|ELK35287.1| Poly(rC)-binding protein 2 [Myotis davidii]
Length = 453
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 89/157 (56%), Gaps = 11/157 (7%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTNAIFKA 71
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I+ ++ ++ + V RL+V ++Q G L+GKGG I E+R+ +GA
Sbjct: 72 FA--MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
+++ G D +P + E + I G +++ E + QI
Sbjct: 130 QVQVAG-DMLP---NSTERAITIAGIPQSIIECVKQI 162
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 115/270 (42%), Gaps = 61/270 (22%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T +S+ LRL+V ++Q G L+GKGGC IK
Sbjct: 65 TNAIFKAFAMIIDKL---EEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPR------ 252
+I D LP +++ + I G ++ + +K I +L++ P+
Sbjct: 122 EIRESTGAQVQVAGDMLPN---STERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPY 178
Query: 253 ----------------------DHESIPG-------NPTGPSHPLPDHSVSSQGAPYATG 283
D S P NP PL +++ Q YA
Sbjct: 179 RPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQ---YAIP 235
Query: 284 HRDVADIH-LPMPPS-IPKFH-ESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIR 340
D+ +H L M S P H +G S + + L ++ +G +IG+ GA I
Sbjct: 236 QPDLTKLHQLAMQQSHFPMTHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKIN 295
Query: 341 SLKQETGCDIKVMEAVSGTEDRLIVISGPA 370
+ Q +G IK+ V G+ DR + I+G A
Sbjct: 296 EIHQMSGAQIKIANPVEGSTDRQVTITGSA 325
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 593 VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLI 652
+ +P L+ I G GA + +I Q+S A+I I +P G+T+ + I+G+ AQ LI
Sbjct: 276 LTIPNDLIGCIIGRQGAKINEIHQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLI 335
>gi|328850348|gb|EGF99514.1| hypothetical protein MELLADRAFT_73383 [Melampsora larici-populina
98AG31]
Length = 383
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 153/360 (42%), Gaps = 40/360 (11%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDR- 375
+T R L + G +IGKGG + ++++TG V +AV G DR++ +SG +
Sbjct: 37 VTLRSLVSTKEAGVIIGKGGKTVAEIREQTGTKAGVSKAVQGVHDRVLSVSGGLEGVSKA 96
Query: 376 ISAPQDAVLRVQTRIARAIPD-----NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKL 430
S DA+L Q +A P T R+LV+ N +G ++G+ GS I E++ +
Sbjct: 97 YSIVADAIL--QNPLAATDPSLTVPPPTATTTAIRVLVSHNLMGSIIGRQGSKIKEIQDI 154
Query: 431 SGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRP- 489
SG + + K+ +P+ E VV + G EA++ A+ +I L + R + +P
Sbjct: 155 SGVRM-VASKEMLPQS---TERVVEVQGSPEAIRVAIHEIGKCLMEDWERAHGTVLYQPG 210
Query: 490 -LNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFM 548
L P D V+ P G+ + + GG GS P H A
Sbjct: 211 ALGP---DGVTAA---------YPGGVLAGGFGVGGQGYGNGGARRAGSGVPSGGHMAG- 257
Query: 549 HHIHRPGMPPHMPDMKPWGPQGLME------VGGPMGFPDFVGPPHRRVPVVVPRSLVPI 602
PG PH G + P D + R + +P +V
Sbjct: 258 ---DLPGRRPHNGTYHSNGNENGHRSRENSLASAPAPVADRL---LRTQNISIPADMVGC 311
Query: 603 IQGEDGACLKQIRQISDAKITITD-PKPGATETVIIISGTPEQTHAAQSLIQAFVMSETE 661
I G+ GA + +IR++S ++I+I P E + I+G+ E A L+ + SE E
Sbjct: 312 IIGKGGAKINEIRRMSGSRISIAKTPHDDTGERMFTITGSSEANEKALFLLYNQLESEKE 371
>gi|397521979|ref|XP_003846057.1| PREDICTED: LOW QUALITY PROTEIN: poly(rC)-binding protein 2 [Pan
paniscus]
Length = 465
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 89/157 (56%), Gaps = 11/157 (7%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTNAIFKA 71
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I+ ++ ++ + V RL+V ++Q G L+GKGG I E+R+ +GA
Sbjct: 72 FA--MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
+++ G D +P + E + I G +++ E + QI
Sbjct: 130 QVQVAG-DMLP---NSTERAITIAGIPQSIIECVKQI 162
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 118/283 (41%), Gaps = 75/283 (26%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T +S+ LRL+V ++Q G L+GKGGC IK
Sbjct: 65 TNAIFKAFAMIIDKL---EEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPR------ 252
+I D LP +++ + I G ++ + +K I +L+ SP+
Sbjct: 122 EIRESTGAQVQVAGDMLPN---STERAITIAGIPQSIIECVKQICVVMLE-SPKGVTIPY 177
Query: 253 ----------------------DHESIPG-------NPTGPSHPLPDHSVSSQGAPYATG 283
D S P NP PL +++ Q YA
Sbjct: 178 RPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQ---YAIP 234
Query: 284 HRDVADIH-LPMPPS-IPKFH-ESGVLDRPKPSPEILTF-------------RLLCHDER 327
D+ +H L M S P H +G SPE+ + L ++
Sbjct: 235 QPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDL 294
Query: 328 VGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPA 370
+G +IG+ GA I ++Q +G IK+ V G+ DR + I+G A
Sbjct: 295 IGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSA 337
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%)
Query: 593 VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLI 652
+ +P L+ I G GA + +IRQ+S A+I I +P G+T+ + I+G+ AQ LI
Sbjct: 288 LTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLI 347
Score = 39.7 bits (91), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 396 DNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVL 455
D QT L + ++ IGC++G+ G+ I E+R++SGA I+I P S + +V
Sbjct: 278 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN----PVEGSTDRQVT- 332
Query: 456 INGEFEAVQEALFQITTRLRH 476
I G ++ A + I L +
Sbjct: 333 ITGSAASISLAQYLINVSLEN 353
>gi|25144314|ref|NP_740869.1| Protein F26B1.2, isoform a [Caenorhabditis elegans]
gi|373218905|emb|CCD64191.1| Protein F26B1.2, isoform a [Caenorhabditis elegans]
Length = 397
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 92/361 (25%), Positives = 149/361 (41%), Gaps = 44/361 (12%)
Query: 320 RLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAP 379
RLL + G +IGKGG I+ L+ E ++V + S T +R+ ++ A
Sbjct: 53 RLLVSSKSAGAIIGKGGENIKRLRAEFNAHVQVPD--SNTPERVCTVT----------AD 100
Query: 380 QDAVLRVQTRIARAIPDNREQT--VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRI 437
+ VL + + + DN + R+LV + G L+G+ GS I E+R+ A ++I
Sbjct: 101 EKTVLNILKDVLPRLEDNFSERDPCEVRMLVHQSHAGALIGRNGSKIKELREKCSARLKI 160
Query: 438 LGKDQIPKCASENEEVVLI-NGEFEAVQEALFQITTRLRHHFFRDA----FPSINRPLNP 492
CA + + VLI +GE + V + ++ L+ + + P+ N +P
Sbjct: 161 F-----TGCAPGSTDRVLITSGEQKNVLGIIEEVMKELKEIPIKGSATPYLPAFN--YDP 213
Query: 493 TFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFD--------AVGGPPPPGSFHPHDDH 544
+ + FP + G +N GP+ + + GG G +
Sbjct: 214 SNISDYGGFPG-----NMPAGGPPNNRGPAPQRGGQGPPGGPRSYGGAITQGGGQRSFEA 268
Query: 545 SAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRR----VPVVVPRSLV 600
F PG P P P + G P GP V +P L
Sbjct: 269 GDFQQFRGGPGPVPGYAMSAPGYPPQQGQFGAPNNAGYGYGPGGGGPVTTAQVTIPSDLG 328
Query: 601 PIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSET 660
I G G + +IRQ S A+IT+ + G E +I I GT +Q H+AQ L+Q V + T
Sbjct: 329 GTIIGRGGERIARIRQESGAQITL-EQSNGQPERIITIKGTEQQIHSAQYLLQQCVRNST 387
Query: 661 E 661
+
Sbjct: 388 Q 388
>gi|156102214|ref|XP_001616800.1| RNA-binding protein Nova-1 [Plasmodium vivax Sal-1]
gi|148805674|gb|EDL47073.1| RNA-binding protein Nova-1, putative [Plasmodium vivax]
Length = 335
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 84/358 (23%), Positives = 156/358 (43%), Gaps = 66/358 (18%)
Query: 309 RPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS---GTEDRLIV 365
+ K + ++ ++L ++ G VIGK G+II S++ +TGC +K+ S T++R++V
Sbjct: 10 KNKATSQLCFVKMLVNNLVAGSVIGKNGSIITSIENKTGCSLKLSPTNSYFPNTQERVLV 69
Query: 366 ISGPAHPDDRISAPQDAVLRVQTRIARAIPDNRE--QTVMT------RLLVASNQIGCLL 417
+ G + +A+L + +I + N + Q + T R++V + + ++
Sbjct: 70 LCGKQEQIN------NALLIILDKIRQITTQNFQDKQNMNTSPKYTCRIVVPKSAVSAII 123
Query: 418 GKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHH 477
GKGG I +++ +GA I+I ++ NE ++ I G FE++ + ++T +++
Sbjct: 124 GKGGQQIKQLQDTTGAKIQISSRED-----GLNERIISIIGPFESISDTAIKVTNSIQND 178
Query: 478 FFRDAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGS 537
P++ LN + S + GR LS NF V P G
Sbjct: 179 ------PNLKDLLNVIY----SKDANMNGRSSLS-----QNF---------VNQVPLNGY 214
Query: 538 FHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPR 597
P + F H + M +M + LM D P + + +P
Sbjct: 215 VVPQ-QYGVFQHEQY---MDVNMMN-------SLMRHS-----RDLFNLPC-EISIQIPD 257
Query: 598 SLVPIIQGEDGACLKQIRQISDAKITIT---DPKPGATETVIIISGTPEQTHAAQSLI 652
+ + G++GA L I + A+I I+ + PG + + I GT HAA L+
Sbjct: 258 EFIGSVIGKNGARLTNIMNSTGAQIRISRKGELVPGTADRKVRIMGTVAAVHAAHVLL 315
>gi|70989551|ref|XP_749625.1| KH domain RNA binding protein [Aspergillus fumigatus Af293]
gi|66847256|gb|EAL87587.1| KH domain RNA binding protein [Aspergillus fumigatus Af293]
Length = 464
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 148/367 (40%), Gaps = 50/367 (13%)
Query: 308 DRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVIS 367
RP+ + R + + VIGKGG + +++ +G V + G +R++ +S
Sbjct: 103 QRPQDESSWIHIRAVISSQEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVS 162
Query: 368 GPAHPDDRISAPQDAVLRVQTRIARAIPDN--------REQTVMTRLLVASNQIGCLLGK 419
G PQDAV + I R + + + +T RLL+ IG ++GK
Sbjct: 163 G----------PQDAVAKAFGLIIRTLNNEPLDAPSTAQSKTYPLRLLIPHLLIGSIIGK 212
Query: 420 GGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFF 479
GGS I E+++ SGA R+ D +SE V+L G ++V A + + L
Sbjct: 213 GGSRIREIQEASGA--RLNASDSCLPLSSERSLVIL--GVADSVHIATYYVAVTLVEQLT 268
Query: 480 -RDAFPSINRPLNPTFLD--------QVSPF-PSFIGRRELSPPGMYS-NFGPSFHKFDA 528
R P+ + + QV P+ P G + P + P+ A
Sbjct: 269 ERFGGPAASAYATRSGGPAGAVPGGMQVVPYVPQPAGGQYGHPEHFKRHHHHPNRAAAGA 328
Query: 529 VGGPPPPGSFHPHDDHSAFMHHIHRPGMP-----PHMPDMKPWGPQGLMEVGGPMGFPDF 583
G P G P +H+ P P PH P P G + G P
Sbjct: 329 YGVPYLHGQPAPAPVAQPALHYGAAPHAPYAGAGPHQP-----APYGAPQPAQARGAPTP 383
Query: 584 VGPPHRRVP-------VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVI 636
P +P + +P +V I G+ GA + +IR +S + I I +P+ + E ++
Sbjct: 384 ATPVGGVMPGQPLTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQENSNERLV 443
Query: 637 IISGTPE 643
I+GT E
Sbjct: 444 TITGTQE 450
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 400 QTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGE 459
Q + ++ + ++ +G ++GKGG+ I E+R LSG+ I+I + + NE +V I G
Sbjct: 394 QPLTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQE-----NSNERLVTITGT 448
Query: 460 FEAVQEALFQITTRL 474
E Q AL+ + +RL
Sbjct: 449 QECNQMALYMLYSRL 463
Score = 42.4 bits (98), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 19/108 (17%)
Query: 271 HSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEI----------LTFR 320
H ++ APYA A H P P P+ ++ R P+P LT +
Sbjct: 349 HYGAAPHAPYAG-----AGPHQPAPYGAPQPAQA----RGAPTPATPVGGVMPGQPLTQQ 399
Query: 321 LLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
+ ++ VG +IGKGGA I ++ +G IK+ E + +RL+ I+G
Sbjct: 400 IYIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQENSNERLVTITG 447
>gi|225563195|gb|EEH11474.1| KH domain RNA binding protein [Ajellomyces capsulatus G186AR]
gi|240275775|gb|EER39288.1| KH domain RNA-binding protein [Ajellomyces capsulatus H143]
Length = 495
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 147/369 (39%), Gaps = 44/369 (11%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISA 378
R + IGKGG + +++ +G V + G +R++ +SG
Sbjct: 139 IRAVISSAEAATCIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGM--------- 189
Query: 379 PQDAVLRVQTRIARAIPDN--------REQTVMTRLLVASNQIGCLLGKGGSIIAEMRKL 430
QDAV + I R + + + +T RLL+ IG ++GK G I E+++
Sbjct: 190 -QDAVAKAFGLIIRTLNNEPLEAPSTAQSKTYPLRLLIPHLLIGSIIGKSGVRIREIQEA 248
Query: 431 SGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRD--------- 481
SGA R+ D ++E V+L G +AV A + + L
Sbjct: 249 SGA--RLNASDSCLPLSTERTLVIL--GVADAVHIATYYVAVTLVEQLTERFGGPAASAY 304
Query: 482 AFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSF--- 538
A S QV P+ + P + P ++ + GG P
Sbjct: 305 ATRSGGAAGVVPGGMQVVPYVPQPAGGQYGHPDTFKRHQPPGNRVVSTGGYGVPYVHGQP 364
Query: 539 -HPHDDHSAFMH-HIHRPGMP---PHMPDMKPWG-PQGLMEVGGPMGFPDFVGPPHRRVP 592
P H A + RPG PH P P+G PQ GGP P P V
Sbjct: 365 GQPQMPHQALHYGSSSRPGYSGAGPHQP--APYGAPQPAPVHGGPSAQPAGGVVPGAPVT 422
Query: 593 --VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQS 650
+ +P +V I G+ GA + +IR +S + I I +P+ + E ++ I+GTPE A
Sbjct: 423 QQIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQDNSNERLVTITGTPECNQMALY 482
Query: 651 LIQAFVMSE 659
++ + + SE
Sbjct: 483 MLYSRLESE 491
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 32/52 (61%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
+T ++ ++ VG +IGKGGA I ++ +G IK+ E + +RL+ I+G
Sbjct: 421 VTQQIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQDNSNERLVTITG 472
>gi|32564028|ref|NP_491825.2| Protein F26B1.2, isoform c [Caenorhabditis elegans]
gi|373218907|emb|CCD64193.1| Protein F26B1.2, isoform c [Caenorhabditis elegans]
Length = 380
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 92/361 (25%), Positives = 149/361 (41%), Gaps = 44/361 (12%)
Query: 320 RLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAP 379
RLL + G +IGKGG I+ L+ E ++V + S T +R+ ++ A
Sbjct: 36 RLLVSSKSAGAIIGKGGENIKRLRAEFNAHVQVPD--SNTPERVCTVT----------AD 83
Query: 380 QDAVLRVQTRIARAIPDNREQT--VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRI 437
+ VL + + + DN + R+LV + G L+G+ GS I E+R+ A ++I
Sbjct: 84 EKTVLNILKDVLPRLEDNFSERDPCEVRMLVHQSHAGALIGRNGSKIKELREKCSARLKI 143
Query: 438 LGKDQIPKCASENEEVVLI-NGEFEAVQEALFQITTRLRHHFFRDA----FPSINRPLNP 492
CA + + VLI +GE + V + ++ L+ + + P+ N +P
Sbjct: 144 F-----TGCAPGSTDRVLITSGEQKNVLGIIEEVMKELKEIPIKGSATPYLPAFN--YDP 196
Query: 493 TFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFD--------AVGGPPPPGSFHPHDDH 544
+ + FP + G +N GP+ + + GG G +
Sbjct: 197 SNISDYGGFPG-----NMPAGGPPNNRGPAPQRGGQGPPGGPRSYGGAITQGGGQRSFEA 251
Query: 545 SAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRR----VPVVVPRSLV 600
F PG P P P + G P GP V +P L
Sbjct: 252 GDFQQFRGGPGPVPGYAMSAPGYPPQQGQFGAPNNAGYGYGPGGGGPVTTAQVTIPSDLG 311
Query: 601 PIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSET 660
I G G + +IRQ S A+IT+ + G E +I I GT +Q H+AQ L+Q V + T
Sbjct: 312 GTIIGRGGERIARIRQESGAQITL-EQSNGQPERIITIKGTEQQIHSAQYLLQQCVRNST 370
Query: 661 E 661
+
Sbjct: 371 Q 371
>gi|74141926|dbj|BAE41029.1| unnamed protein product [Mus musculus]
Length = 278
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 89/157 (56%), Gaps = 11/157 (7%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTNAIFKA 71
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I+ ++ ++ + V RL+V ++Q G L+GKGG I E+R+ +GA
Sbjct: 72 FA--MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
+++ G D +P + E + I G +++ E + QI
Sbjct: 130 QVQVAG-DMLP---NSTERAITIAGIPQSIIECVKQI 162
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 66/130 (50%), Gaps = 21/130 (16%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T +S+ LRL+V ++Q G L+GKGGC IK
Sbjct: 65 TNAIFKAFAMIIDKL---EEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIP 258
+I D LP +++ + I G ++ + +K I +L++ P+ +IP
Sbjct: 122 EIRESTGAQVQVAGDMLPN---STERAITIAGIPQSIIECVKQICVVMLESPPKG-VTIP 177
Query: 259 GNPTGPSHPL 268
P S P+
Sbjct: 178 YRPKPSSSPV 187
>gi|410925644|ref|XP_003976290.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 2
[Takifugu rubripes]
Length = 430
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 96/413 (23%), Positives = 161/413 (38%), Gaps = 79/413 (19%)
Query: 303 ESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDR 362
E R + + E++ R+L + G VIGKGG I++L+ + + V ++ SG E
Sbjct: 30 EEHAFKRSRNADEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDS-SGPERI 88
Query: 363 LIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMT-----RLLVASNQIGCLL 417
L V +A D + ++ +I + + + + + RLL+ + G ++
Sbjct: 89 LSV-----------NASIDTIGKILLKIIPTLEEYQHYSGIDFDSELRLLIHQSLAGGII 137
Query: 418 GKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHH 477
G G+ I E+R+ + I++ + C + VVL+ G+ E V E + I +
Sbjct: 138 GVKGAKIKELRENTQTTIKLFQE----CCPHSTDRVVLVGGKPERVIECIKVILELVSET 193
Query: 478 FFRDAFPSINRPLNPTFLDQVSPFPSFI------GRRELS--PPGMYSNFGPSFHK---- 525
+P +P F D+ + F GRR +S P + F +
Sbjct: 194 ----PIKGRTQPYDPNFYDETYDYGGFTMMFEDRGRRPVSGFPIRVRGGFDRAPPVRSSR 249
Query: 526 --------FDAVG---GPPPPGSFHPHDDHSA-----------------FMHHIHRPGMP 557
+D + GPPPP S A F H + M
Sbjct: 250 PPPPSRRDYDDISPRRGPPPPLSRGGRGSSRARNLPLPPPPPPRGGGDRFSHGSYHSSMD 309
Query: 558 PHMPDMKPWGPQG---LMEVG-----------GPMGFPDFVGPPHRRVPVVVPRSLVPII 603
+ + G + + VG G G +G P V +P+ L I
Sbjct: 310 DRPSERRSRGDRYDSMVSAVGHNNSSWERFQSGSRGSYSDIGGPVITTQVTIPKDLAGSI 369
Query: 604 QGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFV 656
G+ G +KQIR A I I +P G+ + +I I+GT +Q AQ L+Q V
Sbjct: 370 IGKGGQRIKQIRHECGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSV 422
Score = 39.3 bits (90), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 37/63 (58%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
I +V P +IGK G+ + QI + G +I+++E + GS++R++ I + ++ + +
Sbjct: 355 ITTQVTIPKDLAGSIIGKGGQRIKQIRHECGASIKIDEPLEGSEDRIITITGTQDQIQNA 414
Query: 106 ENL 108
+ L
Sbjct: 415 QYL 417
>gi|261195190|ref|XP_002623999.1| KH domain RNA binding protein [Ajellomyces dermatitidis SLH14081]
gi|239587871|gb|EEQ70514.1| KH domain RNA binding protein [Ajellomyces dermatitidis SLH14081]
gi|239610640|gb|EEQ87627.1| KH domain RNA binding protein [Ajellomyces dermatitidis ER-3]
gi|327348926|gb|EGE77783.1| KH domain RNA binding protein [Ajellomyces dermatitidis ATCC 18188]
Length = 496
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 146/369 (39%), Gaps = 44/369 (11%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISA 378
R + IGKGG + +++ +G V + G +R++ +SG
Sbjct: 140 IRAVISSAEAATCIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGM--------- 190
Query: 379 PQDAVLRVQTRIARAIPDN--------REQTVMTRLLVASNQIGCLLGKGGSIIAEMRKL 430
QDAV + I R + + + +T RLL+ IG ++GK G I E+++
Sbjct: 191 -QDAVAKAFGLIIRTLNNEPLEAPSTAQSKTYPLRLLIPHLLIGSIIGKSGVRIREIQEA 249
Query: 431 SGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRD--------- 481
SGA R+ D ++E V+L G +AV A + + L
Sbjct: 250 SGA--RLNASDSCLPLSTERTLVIL--GVADAVHIATYYVAVTLVEQLTERFGGPAASAY 305
Query: 482 AFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSF--- 538
A S QV P+ + P + P ++ + GG P
Sbjct: 306 ATRSGGPAGVVPGGMQVVPYIPQPAGGQYGHPDTFKRHQPQANRAVSTGGYGVPYVHGQP 365
Query: 539 -HPHDDHSAFMH-HIHRPGMP---PHMPDMKPWG-PQGLMEVGGPMGFPDFVGPPHRRVP 592
P H A + RPG PH P P+G PQ G P P P V
Sbjct: 366 GQPQMPHQALHYGSSSRPGYTGAGPHQP--APYGAPQPTQVHGAPTAQPAGGVVPGAPVT 423
Query: 593 --VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQS 650
+ +P +V I G+ GA + +IR +S + I I +P+ + E ++ I+GTPE A
Sbjct: 424 QQIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQDNSNERLVTITGTPECNQMALY 483
Query: 651 LIQAFVMSE 659
++ + + SE
Sbjct: 484 MLYSRLESE 492
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 32/52 (61%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
+T ++ ++ VG +IGKGGA I ++ +G IK+ E + +RL+ I+G
Sbjct: 422 VTQQIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQDNSNERLVTITG 473
>gi|116192195|ref|XP_001221910.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88181728|gb|EAQ89196.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 375
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 86/363 (23%), Positives = 147/363 (40%), Gaps = 70/363 (19%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT R + + G +IGKGG + L+ ETG V + V G DR++ I+G
Sbjct: 50 LTLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVYDRVLTITGGC------ 103
Query: 377 SAPQDAVLRVQTRIARAIPDNREQTVM-----------TRLLVASNQIGCLLGKGGSIIA 425
+A+ R +ARA+ + M +LL++ NQ+G ++G+ G I
Sbjct: 104 ----EAISRAYAVVARALLEGAPTIGMGGVVQSNGTHPIKLLISHNQMGTIIGRQGLKIK 159
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPS 485
++ +SG + + K+ +P+ E +V + G E +Q A+++I L + R A
Sbjct: 160 HIQDVSGVRM-VAQKEMLPQS---TERIVEVQGTPEGIQRAIWEICKCLVDDWQRGAGTV 215
Query: 486 INRPLNPTFLDQVSP----FPSFIGRRELSPPG----MYSNFGPSFHKFDAVGGPPPPGS 537
+ P+ T +P +F+ R +P G + G F GGP P
Sbjct: 216 LYNPVVRTQGAGAAPGVTGTTNFVQDR--APYGGSRVTRTGNGADFSN----GGPRP--- 266
Query: 538 FHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPR 597
++ D A G P H D G + + +P
Sbjct: 267 YNRRSDSDAAAR-----GPPTH----------------------DENGEEIQTQNISIPA 299
Query: 598 SLVPIIQGEDGACLKQIRQISDAKITITD-PKPGATETVIIISGTPEQTHAAQSLIQAFV 656
+V I G G+ + +IR+ S A+I+I P E + I G+ + A L+ +
Sbjct: 300 DMVGCIIGRGGSKISEIRKTSGARISIAKAPHDETGERMFTIMGSAKANERALFLLYENL 359
Query: 657 MSE 659
+E
Sbjct: 360 EAE 362
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 95/215 (44%), Gaps = 30/215 (13%)
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQIDKLPTCAL---------ASDEVVQITGEVDTVRKAL 239
++LL+ Q+G ++G+ G IK I + + +++ +V++ G + +++A+
Sbjct: 138 IKLLISHNQMGTIIGRQGLKIKHIQDVSGVRMVAQKEMLPQSTERIVEVQGTPEGIQRAI 197
Query: 240 KLISHQLLDNSPRDHESIPGNP-------------TGPSHPLPDHSVSSQGAPYATGHRD 286
I L+D+ R ++ NP TG ++ + D + G T +
Sbjct: 198 WEICKCLVDDWQRGAGTVLYNPVVRTQGAGAAPGVTGTTNFVQDRA--PYGGSRVTRTGN 255
Query: 287 VADIHLPMPPSIPKFHESGVLDRPKPS-----PEILTFRLLCHDERVGGVIGKGGAIIRS 341
AD P + +S R P+ EI T + + VG +IG+GG+ I
Sbjct: 256 GADFSNGGPRPYNRRSDSDAAARGPPTHDENGEEIQTQNISIPADMVGCIIGRGGSKISE 315
Query: 342 LKQETGCDIKVMEA-VSGTEDRLIVISGPAHPDDR 375
+++ +G I + +A T +R+ I G A ++R
Sbjct: 316 IRKTSGARISIAKAPHDETGERMFTIMGSAKANER 350
>gi|431913482|gb|ELK15157.1| Poly(rC)-binding protein 4 [Pteropus alecto]
Length = 403
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 145/351 (41%), Gaps = 56/351 (15%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPA----HP 372
LT R+L H + VG +IGK G ++ +++++ I + E +R+ I+G H
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTAAVFHA 75
Query: 373 DDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSG 432
I+ D L T I V RL++ ++Q G L+GK G+ I E+R+ +G
Sbjct: 76 VSMIAFKLDEDLCSATANGGNI---SRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTG 132
Query: 433 AYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNP 492
A +++ G D +P + E V ++G +A+ + QI + + A P +P
Sbjct: 133 AQVQVAG-DLLP---NSTERAVTVSGVPDAIILCVRQICAVILESPPKGA----TIPYHP 184
Query: 493 TFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIH 552
+ +G LS +S G ++ AV P S
Sbjct: 185 SL---------SLGTVLLSANQGFSVQG----QYGAV----TPAEVTKLQQLSGHAVPFA 227
Query: 553 RPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLK 612
PGM +P + P E +VP L+ + G G+ +
Sbjct: 228 SPGM---VPGLDPGAQTSSQE-------------------FLVPNDLIGCVIGRQGSKIS 265
Query: 613 QIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSETETT 663
+IRQ+S A I I + GA E + I+G+P AQ LI A + + T+
Sbjct: 266 EIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYLITACLETAKSTS 316
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 95/210 (45%), Gaps = 20/210 (9%)
Query: 174 TEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI------------DKLPTCALA 221
+ A+ N LRL++ ++Q G L+GK G IK+I D LP +
Sbjct: 89 SATANGGNISRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPN---S 145
Query: 222 SDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPT---GPSHPLPDHSVSSQGA 278
++ V ++G D + ++ I +L++ P+ +IP +P+ G + S QG
Sbjct: 146 TERAVTVSGVPDAIILCVRQICAVILESPPKG-ATIPYHPSLSLGTVLLSANQGFSVQGQ 204
Query: 279 PYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAI 338
A +V + ++P F G++ P + + L ++ +G VIG+ G+
Sbjct: 205 YGAVTPAEVTKLQQLSGHAVP-FASPGMVPGLDPGAQTSSQEFLVPNDLIGCVIGRQGSK 263
Query: 339 IRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
I ++Q +G IK+ G +R + I+G
Sbjct: 264 ISEIRQMSGAHIKIGNQAEGAGERHVTITG 293
>gi|363744462|ref|XP_425032.2| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 2
[Gallus gallus]
Length = 430
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 99/418 (23%), Positives = 154/418 (36%), Gaps = 85/418 (20%)
Query: 301 FHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTE 360
E R + + E++ R+L + G VIGKGG I++L+ + + V ++
Sbjct: 27 MEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDS----- 81
Query: 361 DRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQT--------VMTRLLVASNQ 412
SGP +RI + + + + + IP E RLL+ +
Sbjct: 82 ------SGP----ERILSISADIETIGEILKKIIPTLEEYQHYKGSDFDCELRLLIHQSL 131
Query: 413 IGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITT 472
G ++G G+ I E+R+ + I++ + C + VVLI G+ + V E + I
Sbjct: 132 AGGIIGVKGAKIKELRENTQTTIKLFQE----CCPHSTDRVVLIGGKPDRVVECIKIILD 187
Query: 473 RLRHHFFRDAFPSINRPLNPTFLDQVSPFPSF--IGRRELSPPGMYSNFGPSFHKF-DAV 529
+ +P +P F D+ + F R P G F +
Sbjct: 188 LISES----PIKGRAQPYDPNFYDETYDYGGFTMFDDRRGRPVGFPMRGRGGFDRMPPGR 243
Query: 530 GGPPPPGSFHPHDDHSA----------------------------------FMHHIH--R 553
GG P P S +DD S M + R
Sbjct: 244 GGRPMPPSRRDYDDMSPRRGPPPPPPGRGGRGGSRARNLPLPPPPPPRGGDLMSYDRRGR 303
Query: 554 PG-------MPPHMPDMKPWGPQGLMEVG--------GPMGFPDFVGPPHRRVPVVVPRS 598
PG M H+ P L E G G G +G P V +P+
Sbjct: 304 PGDRYDGMMMQCHVDACDDMQPPELFEGGSGYDYSYAGGRGSYGDLGGPIITTQVTIPKD 363
Query: 599 LVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFV 656
L I G+ G +KQIR S A I I +P G+ + +I I+GT +Q AQ L+Q V
Sbjct: 364 LAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSV 421
Score = 40.0 bits (92), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 38/63 (60%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
I +V P +IGK G+ + QI ++G +I+++E + GS++R++ I + ++ + +
Sbjct: 354 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNA 413
Query: 106 ENL 108
+ L
Sbjct: 414 QYL 416
>gi|159129031|gb|EDP54145.1| KH domain RNA binding protein [Aspergillus fumigatus A1163]
Length = 464
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 147/375 (39%), Gaps = 50/375 (13%)
Query: 309 RPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
RP+ + R + + VIGKGG + +++ +G V + G +R++ +SG
Sbjct: 104 RPQDESSWIHIRAVISSQEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSG 163
Query: 369 PAHPDDRISAPQDAVLRVQTRIARAIPDN--------REQTVMTRLLVASNQIGCLLGKG 420
PQDAV + I R + + + +T RLL+ IG ++GKG
Sbjct: 164 ----------PQDAVAKAFGLIIRTLNNEPLDAPSTAQSKTYPLRLLIPHLLIGSIIGKG 213
Query: 421 GSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFR 480
GS I E+++ SGA R+ D +SE V+L G ++V A + + L
Sbjct: 214 GSRIREIQEASGA--RLNASDSCLPLSSERSLVIL--GVADSVHIATYYVAVTLVEQLTE 269
Query: 481 D---------AFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHK--FDAV 529
A S QV P+ + P + P ++ A
Sbjct: 270 RFGGPAASAYATRSGGPAGAVPGGMQVVPYVPQPAGGQYGHPEHFKRHHPHPNRAAAGAY 329
Query: 530 GGPPPPGSFHPHDDHSAFMHHIHRPGMP-----PHMPDMKPWGPQGLMEVGGPMGFPDFV 584
G P G P +H+ P P PH P P G + G P
Sbjct: 330 GVPYLHGQPAPAPVAQPALHYGAAPHAPYAGAGPHQP-----APYGAPQPAQARGAPTPA 384
Query: 585 GPPHRRVP-------VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVII 637
P +P + +P +V I G+ GA + +IR +S + I I +P+ + E ++
Sbjct: 385 TPVGGVMPGQPLTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQENSNERLVT 444
Query: 638 ISGTPEQTHAAQSLI 652
I+GT E A ++
Sbjct: 445 ITGTQECNQMALYML 459
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 400 QTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGE 459
Q + ++ + ++ +G ++GKGG+ I E+R LSG+ I+I + + NE +V I G
Sbjct: 394 QPLTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQE-----NSNERLVTITGT 448
Query: 460 FEAVQEALFQITTRL 474
E Q AL+ + +RL
Sbjct: 449 QECNQMALYMLYSRL 463
Score = 42.0 bits (97), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 19/108 (17%)
Query: 271 HSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEI----------LTFR 320
H ++ APYA A H P P P+ ++ R P+P LT +
Sbjct: 349 HYGAAPHAPYAG-----AGPHQPAPYGAPQPAQA----RGAPTPATPVGGVMPGQPLTQQ 399
Query: 321 LLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
+ ++ VG +IGKGGA I ++ +G IK+ E + +RL+ I+G
Sbjct: 400 IYIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQENSNERLVTITG 447
>gi|119480179|ref|XP_001260118.1| KH domain RNA binding protein [Neosartorya fischeri NRRL 181]
gi|119408272|gb|EAW18221.1| KH domain RNA binding protein [Neosartorya fischeri NRRL 181]
Length = 464
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 144/366 (39%), Gaps = 50/366 (13%)
Query: 309 RPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
RP+ + R + + VIGKGG + +++ +G V + G +R++ +SG
Sbjct: 104 RPQDESSWIHIRAVISSQEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSG 163
Query: 369 PAHPDDRISAPQDAVLRVQTRIARAIPDN--------REQTVMTRLLVASNQIGCLLGKG 420
PQDAV + I R + + + +T RLL+ IG ++GKG
Sbjct: 164 ----------PQDAVAKAFGLIIRTLNNEPLDAPSTAQSKTYPLRLLIPHLLIGSIIGKG 213
Query: 421 GSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFR 480
GS I E+++ SGA R+ D +SE V+L G ++V A + + L
Sbjct: 214 GSRIREIQEASGA--RLNASDSCLPLSSERSLVIL--GVADSVHIATYYVAVTLVEQLTE 269
Query: 481 D---------AFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHK--FDAV 529
A S QV P+ + P + P ++ A
Sbjct: 270 RFGGPAASAYATRSGGPAGAVPGGMQVVPYVPQPAGGQYGHPEHFKRHHPHPNRAAAGAY 329
Query: 530 GGPPPPGSFHPHDDHSAFMHHIHRPGMP-----PHMPDMKPWGPQGLMEVGGPMGFPDFV 584
G P G P +H+ P P PH P P G + G P
Sbjct: 330 GVPYLHGQPAPAPVAQPALHYGAAPHAPYAGAGPHQP-----APYGAPQPAQARGAPTPA 384
Query: 585 GPPHRRVP-------VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVII 637
P +P + +P +V I G+ GA + +IR +S + I I +P+ + E ++
Sbjct: 385 TPVGGVMPGQPLTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQENSNERLVT 444
Query: 638 ISGTPE 643
I+GT E
Sbjct: 445 ITGTQE 450
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 400 QTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGE 459
Q + ++ + ++ +G ++GKGG+ I E+R LSG+ I+I + + NE +V I G
Sbjct: 394 QPLTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQE-----NSNERLVTITGT 448
Query: 460 FEAVQEALFQITTRL 474
E Q AL+ + +RL
Sbjct: 449 QECNQMALYMLYSRL 463
Score = 42.0 bits (97), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 19/108 (17%)
Query: 271 HSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEI----------LTFR 320
H ++ APYA A H P P P+ ++ R P+P LT +
Sbjct: 349 HYGAAPHAPYAG-----AGPHQPAPYGAPQPAQA----RGAPTPATPVGGVMPGQPLTQQ 399
Query: 321 LLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
+ ++ VG +IGKGGA I ++ +G IK+ E + +RL+ I+G
Sbjct: 400 IYIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQENSNERLVTITG 447
>gi|242021846|ref|XP_002431354.1| polyrC binding protein, putative [Pediculus humanus corporis]
gi|212516622|gb|EEB18616.1| polyrC binding protein, putative [Pediculus humanus corporis]
Length = 234
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 86/168 (51%), Gaps = 28/168 (16%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RL+ + VG +IGK G I++ ++E+G I + + +R++ ++GP
Sbjct: 15 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTVTGPT------ 66
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT------------VMTRLLVASNQIGCLLGKGGSII 424
+A+ + + I + + +E + RL+V ++Q G L+GKGGS I
Sbjct: 67 ----NAIFKAFSLICKKFEEFQELQSGGGSMGIPKPPITLRLIVPASQCGSLIGKGGSKI 122
Query: 425 AEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITT 472
E+R+++GA I++ + +P + E V I+G EA+ + ++ I
Sbjct: 123 KEIREVTGASIQV-ASEMLP---NSTERAVTISGTSEAITQCIYHICC 166
>gi|328774304|gb|EGF84341.1| hypothetical protein BATDEDRAFT_8525 [Batrachochytrium
dendrobatidis JAM81]
Length = 343
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 145/364 (39%), Gaps = 71/364 (19%)
Query: 308 DRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVIS 367
D + PE +T R L + G VIGKGGA + +++Q + V + V +R++ +
Sbjct: 5 DAAETVPE-MTLRSLVSTKEAGVVIGKGGASVANVRQIASVKVGVSKVVPSVSERILTVV 63
Query: 368 GPAHPDDRISA--PQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIA 425
GP + A ++ + QT + D+ E++ RLLVA IG ++GK G+ I
Sbjct: 64 GPLPNVAKAYALIAKNLLESTQTITSNGNLDSTEESTAIRLLVAHQLIGSIIGKAGAKIR 123
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPS 485
E+++ SGA I ++ K+ +P+ E VV I G +A+ A++ I ++ R A
Sbjct: 124 EIQEASGAKI-VVSKEMMPQ---STERVVEIYGLVDAIHIAIYHIGVCMKSDNERAAGII 179
Query: 486 INRPLNPTFLDQVSPFPS-----------------FIGRRELSPPGMYSNFGPSFHKFDA 528
P N D SPF S IGRR S S+
Sbjct: 180 PYDPQNSLRYDS-SPFSSSAIISTSRSTGRNSLTNAIGRRHSSNNSSVSSNSIRAMSGST 238
Query: 529 VGGPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPH 588
GG P + +P D + M
Sbjct: 239 FGGAPASSTENP-DTRTCVM---------------------------------------- 257
Query: 589 RRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAA 648
V ++ + G+ G+ + QIR++S AK+ + + G + I I GT E A
Sbjct: 258 -----TVQSDMIGCLMGKGGSHITQIRRLSGAKLHVAEQVSGRNDREITIVGTDEANRKA 312
Query: 649 QSLI 652
SL+
Sbjct: 313 MSLL 316
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 103/237 (43%), Gaps = 25/237 (10%)
Query: 156 VQKALLLVFERMVE-VEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDK 214
V KA L+ + ++E + T + ++T+ S +RLLV +G ++GK G I++I +
Sbjct: 69 VAKAYALIAKNLLESTQTITSNGNLDSTEEST-AIRLLVAHQLIGSIIGKAGAKIREIQE 127
Query: 215 LPTCAL---------ASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGP- 264
+ +++ VV+I G VD + A+ I + ++ R IP +P
Sbjct: 128 ASGAKIVVSKEMMPQSTERVVEIYGLVDAIHIAIYHIGVCMKSDNERAAGIIPYDPQNSL 187
Query: 265 ---SHPLPDHSVSS-------QGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPS- 313
S P ++ S A G R ++ SI S P S
Sbjct: 188 RYDSSPFSSSAIISTSRSTGRNSLTNAIGRRHSSNNSSVSSNSIRAMSGSTFGGAPASST 247
Query: 314 --PEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
P+ T + + +G ++GKGG+ I +++ +G + V E VSG DR I I G
Sbjct: 248 ENPDTRTCVMTVQSDMIGCLMGKGGSHITQIRRLSGAKLHVAEQVSGRNDREITIVG 304
Score = 45.8 bits (107), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 9/80 (11%)
Query: 395 PDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVV 454
PD R VMT V S+ IGCL+GKGGS I ++R+LSGA + + + + N+ +
Sbjct: 250 PDTR-TCVMT---VQSDMIGCLMGKGGSHITQIRRLSGAKLHVA-----EQVSGRNDREI 300
Query: 455 LINGEFEAVQEALFQITTRL 474
I G EA ++A+ + +L
Sbjct: 301 TIVGTDEANRKAMSLLYNKL 320
>gi|410925642|ref|XP_003976289.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 1
[Takifugu rubripes]
Length = 430
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 95/413 (23%), Positives = 159/413 (38%), Gaps = 79/413 (19%)
Query: 303 ESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDR 362
E R + + E++ R+L + G VIGKGG I++L+ + + V ++ SG E
Sbjct: 30 EEHAFKRSRNADEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDS-SGPERI 88
Query: 363 LIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMT-----RLLVASNQIGCLL 417
L V +A D + ++ +I + + + + + RLL+ + G ++
Sbjct: 89 LSV-----------NASIDTIGKILLKIIPTLEEYQHYSGIDFDSELRLLIHQSLAGGII 137
Query: 418 GKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHH 477
G G+ I E+R+ + I++ + C + VVL+ G+ E V E + I +
Sbjct: 138 GVKGAKIKELRENTQTTIKLFQE----CCPHSTDRVVLVGGKPERVIECIKVILELVSET 193
Query: 478 FFRDAFPSINRPLNPTFLDQVSPFPSFI------GRRELS--PPGMYSNFGPSFHK---- 525
+P +P F D+ + F GRR +S P + F +
Sbjct: 194 ----PIKGRTQPYDPNFYDETYDYGGFTMMFEDRGRRPVSGFPIRVRGGFDRAPPVRSSR 249
Query: 526 --------FDAVG---GPPPPGSFHPHDDHSA-----------------FMHHIHRPGMP 557
+D + GPPPP S A F H + M
Sbjct: 250 PPPPSRRDYDDISPRRGPPPPLSRGGRGSSRARNLPLPPPPPPRGGGDRFSHGSYHSSMD 309
Query: 558 PHMPDMKPWGPQGLMEVG--------------GPMGFPDFVGPPHRRVPVVVPRSLVPII 603
+ + G + G G G +G P V +P+ L I
Sbjct: 310 DRPSERRSRGDRYDSMSGSRYDNNSSWERFQSGSRGSYSDIGGPVITTQVTIPKDLAGSI 369
Query: 604 QGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFV 656
G+ G +KQIR A I I +P G+ + +I I+GT +Q AQ L+Q V
Sbjct: 370 IGKGGQRIKQIRHECGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSV 422
Score = 40.0 bits (92), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 55/111 (49%), Gaps = 4/111 (3%)
Query: 2 SLPLTPSKRPHDDDNHTEPNGKEKSQKLAGDYSENQPSKSFP--GG--IMFRVLCPVSKI 57
S+ PS+R D + +G + + ++ S+ GG I +V P
Sbjct: 307 SMDDRPSERRSRGDRYDSMSGSRYDNNSSWERFQSGSRGSYSDIGGPVITTQVTIPKDLA 366
Query: 58 DGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENL 108
+IGK G+ + QI + G +I+++E + GS++R++ I + ++ + ++ L
Sbjct: 367 GSIIGKGGQRIKQIRHECGASIKIDEPLEGSEDRIITITGTQDQIQNAQYL 417
>gi|410897014|ref|XP_003961994.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Takifugu rubripes]
Length = 607
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 94/392 (23%), Positives = 159/392 (40%), Gaps = 73/392 (18%)
Query: 287 VADIHLPMPPSIPKFHESGVLDR------PKPSPEI-------LTFRLLCHDERVGGVIG 333
+AD+ P P+ G L R P PS E R++ + VG +IG
Sbjct: 154 IADMDAAPPDQAPRTRRGGRLSRNQGASQPGPSGEFGAPRTTQQDLRIIVPTQYVGAIIG 213
Query: 334 KGGAIIRSLKQET--GCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIA 391
K G I+++ ++T DI E E + + S P + SA ++ + + A
Sbjct: 214 KEGLTIKNVTKQTQSKVDIHRKENAGAAEKPITIHSTP----EGCSAACRMIMEIMQKEA 269
Query: 392 ---RAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCAS 448
+A+ D + +++ ++N IG L+GK G + ++ + +G I I +
Sbjct: 270 NETKAMED-----IPLKIIASNNYIGRLIGKQGRNLKKIEEETGTKITISSLQDL--NIY 322
Query: 449 ENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSPFPSFIGRR 508
NE + + G EA A +I +LR + D +IN+ Q S P
Sbjct: 323 NNERTITVKGSLEACCNAEVEIMKKLREAYEND-IAAINQ--------QTSLIPGL---- 369
Query: 509 ELSPPGMYSNFGPSFHKFDAVGGP----PP--PGSFHPHDDHSAFMHHIHRPGMPPHMPD 562
L+ G++S+ P GP PP P ++P HS+ + ++ G+PP
Sbjct: 370 NLNALGIFSSTLPV---LSPAAGPRSTMPPVGPAGYNPFLGHSSHLSSLY--GVPP---- 420
Query: 563 MKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVV-VPRSLVPIIQGEDGACLKQIRQISDAK 621
P + V + +P V + G+ G +KQ+ + A
Sbjct: 421 --------------ASAIPHQHAAQEQEVAYLFIPTQAVGALIGKKGQHIKQLAHFAGAS 466
Query: 622 ITITDPK-PGATETVIIISGTPEQTHAAQSLI 652
I + + P ATE ++II+GTPE AQ I
Sbjct: 467 IKVAPAEMPDATERMVIITGTPEAQFKAQGRI 498
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 74/157 (47%), Gaps = 20/157 (12%)
Query: 321 LLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA-VSGTEDRLIVISGPAHPDDRISAP 379
L + VG +IGK G I+ L G IKV A + +R+++I+G
Sbjct: 438 LFIPTQAVGALIGKKGQHIKQLAHFAGASIKVAPAEMPDATERMVIITGTP--------- 488
Query: 380 QDAVLRVQTRIARAIPD------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
+A + Q RI + + E + T + V S G ++GKGG + E++ L+ A
Sbjct: 489 -EAQFKAQGRIFGKLKEENIFTGKEEVRLETHIKVPSTAAGRVIGKGGKTVNELQSLTSA 547
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
+ I+ +DQ P +NE VV I G F A Q A +I
Sbjct: 548 EV-IVPRDQTPD--EKNEVVVKICGHFFANQTAQRKI 581
>gi|189234912|ref|XP_969611.2| PREDICTED: similar to AGAP004942-PA [Tribolium castaneum]
Length = 446
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 86/166 (51%), Gaps = 26/166 (15%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RL+ + VG +IGK G I++ ++E+G I + + +R++ ++G
Sbjct: 17 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTVTGST------ 68
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT----------VMTRLLVASNQIGCLLGKGGSIIAE 426
+A+ + T I + + ++ + RL+V ++Q G L+GKGGS I E
Sbjct: 69 ----NAIFKAFTLICKKFEEFQDINSGGSGVPRPPITLRLIVPASQCGSLIGKGGSKIKE 124
Query: 427 MRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITT 472
+R+++GA I++ + +P + E V I+G EA+ + ++ I T
Sbjct: 125 IREVTGASIQV-ASEMLP---NSTERAVTISGTGEAITQCIYHICT 166
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 95/227 (41%), Gaps = 43/227 (18%)
Query: 187 FVLRLLVLSTQVGCLLGKGGCVIKQIDKLPTCAL---------ASDEVVQITGEVDTVRK 237
LRL+V ++Q G L+GKGG IK+I ++ ++ +++ V I+G + + +
Sbjct: 100 ITLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASEMLPNSTERAVTISGTGEAITQ 159
Query: 238 ALKLISHQLLDNSPRDHESIPGNPT----GPSHPLPDHSVSSQGAPYATGHRDVADIHLP 293
+ I +L++ P+ +IP P GP + + QG H D++ +
Sbjct: 160 CIYHICTVMLESPPKG-ATIPYRPKPQVGGPVILAGGQAYTIQGNYAVPAHTDMSALGKS 218
Query: 294 --------------------MPPSIPKFHESGVL----DRPKPSPEILTFRLLCHDERVG 329
+ P+ L R + + T + +E +G
Sbjct: 219 PLAGLAALGLGGLAPTNTGGLNPAALAALAGSQLRTSNSRNQQNSNQQTHEMTVPNELIG 278
Query: 330 GVIGKGGAIIRSLKQETGCDIKVMEA---VSGTEDRLIVISGPAHPD 373
+IGKGG I ++Q +G I++ SG DR I ISG +PD
Sbjct: 279 CIIGKGGTKIAEIRQISGAMIRISNCDDRESGVTDRTITISG--NPD 323
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 51/86 (59%), Gaps = 4/86 (4%)
Query: 385 RVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIP 444
+++T +R ++ +QT + V + IGC++GKGG+ IAE+R++SGA IRI D
Sbjct: 251 QLRTSNSRNQQNSNQQT--HEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCDD-- 306
Query: 445 KCASENEEVVLINGEFEAVQEALFQI 470
+ + + + I+G +AV A + I
Sbjct: 307 RESGVTDRTITISGNPDAVALAQYLI 332
Score = 42.7 bits (99), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 593 VVVPRSLVPIIQGEDGACLKQIRQISDAKITIT---DPKPGATETVIIISGTPEQTHAAQ 649
+ VP L+ I G+ G + +IRQIS A I I+ D + G T+ I ISG P+ AQ
Sbjct: 270 MTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCDDRESGVTDRTITISGNPDAVALAQ 329
Query: 650 SLIQAFV 656
LI V
Sbjct: 330 YLINMSV 336
>gi|358055492|dbj|GAA98612.1| hypothetical protein E5Q_05299 [Mixia osmundae IAM 14324]
Length = 549
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 93/371 (25%), Positives = 154/371 (41%), Gaps = 60/371 (16%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
+T R L + +IGKGG I+ ++++ G + V E++ +R++ +SG D +
Sbjct: 188 VTLRALIVTQDASIIIGKGGQSIKEIREKAGVKVLVSESIPNNPERILNVSGLL---DGV 244
Query: 377 SAPQDAVLRVQTRI------ARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKL 430
S ++R RI ++P +R T+ R +V ++++G ++GK G+ I E++
Sbjct: 245 SKAFGLIVR---RINDEPFDVPSVPGSRAVTI--RFIVPNHRMGSIIGKQGAKIKEIQDA 299
Query: 431 SGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPL 490
SGA ++ + +P E ++ I+G +A+ A++ L H R N P
Sbjct: 300 SGARLQAT-ESMLP---GSTERILSISGVADAIHIAVYYTGAILAEHSDRAVN---NTPY 352
Query: 491 NPTFLDQVSPFPSFIGRRELSPPGMYSNFGP---------------SFHK-FDAVGGPPP 534
P P S G Y P +H + +GG P
Sbjct: 353 RPGLPPTSYGPPPPRPGSGPSAGGYYPPAPPHHDPYRVAAPMVNPTGYHDPYRGMGG--P 410
Query: 535 PGSFHPHDDHSAFMHHIHRP---GMPPHMPDMK----PWGPQGLMEVGGPMGFPDFVGPP 587
P + P A H P GMPP P+GP + GP+G P
Sbjct: 411 PAAMAPPQHGQAPQQHFAAPPVQGMPPAQAQATTSAMPFGPPPVAT--GPVG-------P 461
Query: 588 HRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGAT----ETVIIISGTPE 643
++ V +P LV I G+ G + ++R S A I I +P G E ++ +SG P
Sbjct: 462 NQTQQVYIPNELVGPIIGKGGLKINELRNNSGAHIKIMEPSEGGLNPNGERLVNVSGQPA 521
Query: 644 QTH-AAQSLIQ 653
A Q L Q
Sbjct: 522 NIQMAVQMLYQ 532
>gi|212275472|ref|NP_001130567.1| uncharacterized protein LOC100191666 [Zea mays]
gi|194689502|gb|ACF78835.1| unknown [Zea mays]
gi|413934214|gb|AFW68765.1| hypothetical protein ZEAMMB73_642279 [Zea mays]
Length = 580
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 93/191 (48%), Gaps = 11/191 (5%)
Query: 314 PEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPD 373
P FR+L ++VG +IG G +R L +ET ++++ ++ ++I G D
Sbjct: 52 PGTTVFRMLIPAQKVGAIIGHKGERVRRLCEETRACVRIIGGHLCAAEQAVIIFGREQLD 111
Query: 374 DRISAPQDAVLRV--QTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLS 431
+ + DA+LRV QT ++ + ++ R+L S Q L+G+ G +I + + S
Sbjct: 112 EPLPPAMDALLRVYQQTINNDSLDVGPDNVIVRRILAPSEQAASLIGEHGVMINSIMEAS 171
Query: 432 GAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLN 491
IR+L D +P A E + V+ I G V +AL + + LR + ++R +
Sbjct: 172 QTDIRVL-DDDLPPVALEEDRVIEIWGSPAGVYKALELVASHLRKYL-------VDRSVI 223
Query: 492 PTFLDQVSPFP 502
P F D+ P P
Sbjct: 224 PLF-DRYVPMP 233
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 53/125 (42%), Gaps = 34/125 (27%)
Query: 187 FVLRLLVLSTQVGCLLGKGGCVIKQI------------DKLPTCALASDEVVQITGEVDT 234
V R+L S Q L+G+ G +I I D LP AL D V++I G
Sbjct: 142 IVRRILAPSEQAASLIGEHGVMINSIMEASQTDIRVLDDDLPPVALEEDRVIEIWGSPAG 201
Query: 235 VRKALKLISHQ----LLDNS-----------PRDHESIP-----GNPTGPSHPLP--DHS 272
V KAL+L++ L+D S P H +P P GP HP+ HS
Sbjct: 202 VYKALELVASHLRKYLVDRSVIPLFDRYVPMPILHMDMPPCHYIDYPEGPVHPVSPGYHS 261
Query: 273 VSSQG 277
VS++
Sbjct: 262 VSTEN 266
>gi|116180584|ref|XP_001220141.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88185217|gb|EAQ92685.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 485
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 93/380 (24%), Positives = 152/380 (40%), Gaps = 60/380 (15%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
+ R + +IGKGG + ++Q +G V + G +R++ +SG D +
Sbjct: 125 IHVRAVISSPEAATIIGKGGENVSKIRQMSGAKCTVSDYQKGAVERILTVSGIV---DAV 181
Query: 377 SAPQDAVLRVQTRIARAIPDNRE-QTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYI 435
+ ++R P ++ +T RLL+ IG ++GKGG+ I E+++ SGA
Sbjct: 182 AKAFGLIIRTLNNEPLGEPSSQHSKTYPLRLLIPHILIGSIIGKGGARIKEIQEASGA-- 239
Query: 436 RILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHF---FRDAFPSINRPLNP 492
R+ D ++E VV+ G +AV A + + + L F A S +
Sbjct: 240 RLNASDSCLPLSTERSLVVM--GVADAVHIATYYVGSTLLEQLNERFGGASASAYATRSG 297
Query: 493 TFLD------QVSPFPSFIGRRELSPPGMYSNFG--PSFHKFDAVGGPPPPGSFHPHDDH 544
QV P+ +P NFG ++H+ G P P P +
Sbjct: 298 GPAGAVPGGMQVIPY---------NPQPAGGNFGNRDNYHR----GRPDPRAHHMPPQAY 344
Query: 545 SAFMHHIHRPGMPPHMP------------------DMKPWGPQGLMEVGGPMGFPDFVGP 586
H H+P P P P GP G GP G P P
Sbjct: 345 PPQYGHPHQPHPNPAAPMPYGGHAAAGGYGAGPHVQPHPAGPAGPHGPAGPHGQPM---P 401
Query: 587 PHRRVP-------VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIIS 639
VP + +P +V I G+ G + +IRQIS + I I +P+ + E ++ I+
Sbjct: 402 GGAAVPGGPLTQQIYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQDNSNERLVTIT 461
Query: 640 GTPEQTHAAQSLIQAFVMSE 659
GT E A ++ + + SE
Sbjct: 462 GTEECNRMALYMLYSRLESE 481
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 20 PNGKEKSQKLAGDYSENQPS-KSFPGG-IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGV 77
P G AG + + P + PGG + ++ P + +IGK G+ +++I Q +G
Sbjct: 383 PAGPAGPHGPAGPHGQPMPGGAAVPGGPLTQQIYIPNDMVGAIIGKGGQKINEIRQISGS 442
Query: 78 TIRVEETVSGSDERLVVIEASD 99
I++ E S+ERLV I ++
Sbjct: 443 VIKINEPQDNSNERLVTITGTE 464
Score = 39.7 bits (91), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 13/102 (12%)
Query: 156 VQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKL 215
V KA L+ R + EP E + Q S + LRLL+ +G ++GKGG IK+I +
Sbjct: 181 VAKAFGLII-RTLNNEPLGEPSSQH---SKTYPLRLLIPHILIGSIIGKGGARIKEIQEA 236
Query: 216 PTCAL-ASDEVVQIT--------GEVDTVRKALKLISHQLLD 248
L ASD + ++ G D V A + LL+
Sbjct: 237 SGARLNASDSCLPLSTERSLVVMGVADAVHIATYYVGSTLLE 278
>gi|363744460|ref|XP_003643054.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 1
[Gallus gallus]
Length = 426
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 99/418 (23%), Positives = 154/418 (36%), Gaps = 85/418 (20%)
Query: 301 FHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTE 360
E R + + E++ R+L + G VIGKGG I++L+ + + V ++
Sbjct: 24 MEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDS----- 78
Query: 361 DRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQT--------VMTRLLVASNQ 412
SGP +RI + + + + + IP E RLL+ +
Sbjct: 79 ------SGP----ERILSISADIETIGEILKKIIPTLEEYQHYKGSDFDCELRLLIHQSL 128
Query: 413 IGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITT 472
G ++G G+ I E+R+ + I++ + C + VVLI G+ + V E + I
Sbjct: 129 AGGIIGVKGAKIKELRENTQTTIKLFQE----CCPHSTDRVVLIGGKPDRVVECIKIILD 184
Query: 473 RLRHHFFRDAFPSINRPLNPTFLDQVSPFPSF--IGRRELSPPGMYSNFGPSFHKF-DAV 529
+ +P +P F D+ + F R P G F +
Sbjct: 185 LISES----PIKGRAQPYDPNFYDETYDYGGFTMFDDRRGRPVGFPMRGRGGFDRMPPGR 240
Query: 530 GGPPPPGSFHPHDDHSA----------------------------------FMHHIH--R 553
GG P P S +DD S M + R
Sbjct: 241 GGRPMPPSRRDYDDMSPRRGPPPPPPGRGGRGGSRARNLPLPPPPPPRGGDLMSYDRRGR 300
Query: 554 PG-------MPPHMPDMKPWGPQGLMEVG--------GPMGFPDFVGPPHRRVPVVVPRS 598
PG M H+ P L E G G G +G P V +P+
Sbjct: 301 PGDRYDGMMMQCHVDACDDMQPPELFEGGSGYDYSYAGGRGSYGDLGGPIITTQVTIPKD 360
Query: 599 LVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFV 656
L I G+ G +KQIR S A I I +P G+ + +I I+GT +Q AQ L+Q V
Sbjct: 361 LAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSV 418
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 38/63 (60%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
I +V P +IGK G+ + QI ++G +I+++E + GS++R++ I + ++ + +
Sbjct: 351 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNA 410
Query: 106 ENL 108
+ L
Sbjct: 411 QYL 413
>gi|357146019|ref|XP_003573848.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 470
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/362 (22%), Positives = 139/362 (38%), Gaps = 52/362 (14%)
Query: 318 TFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTE-DRLIVISGPAHPDDRI 376
FRL+ ++VGG+IG+ G IR L +ET ++V++ G ++++IS +
Sbjct: 88 VFRLVVAGDKVGGLIGRRGETIRRLCEETRARVRVLDPADGVAGQQIVLISATEETQAEL 147
Query: 377 SAPQDAVLRVQTRIARAIPDNREQTV--------MTRLLVASNQIGCLLGKGGSIIAEMR 428
+ DA +++ + N T RLLV Q L+GK G +I ++
Sbjct: 148 APAMDAAIKIFKHVNEIEGINASVTFSASAPEICSARLLVPKEQAAHLIGKQGIMIKSIQ 207
Query: 429 KLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRH--------HFFR 480
+ +G+ IRI+ KD + +E +V I G AL + LR H F
Sbjct: 208 ETTGSTIRIIDKDDLLNYRMVDERIVEILGASLKALNALKSVLGLLRKFLVDHSVLHLFE 267
Query: 481 DAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHP 540
+I + + +QVS + R+L S P +++ + G P
Sbjct: 268 RKNQAIAHAQDISKENQVSNDYALPVSRDLLLSDGQSPLSPKGNRYLSYGRDPSVC---- 323
Query: 541 HDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLV 600
D +S+ + H + MK +P
Sbjct: 324 -DPYSSQIRHPTESLIKKITQTMK------------------------------IPLPQA 352
Query: 601 PIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSET 660
I G G + IR +S A + + + E ++ I G+ Q H A L+Q ++ +
Sbjct: 353 DEIIGVGGRNIAHIRSVSGAIVVLEETGDYLNEVLVTIQGSSSQVHTAHQLVQVILLGDR 412
Query: 661 ET 662
E
Sbjct: 413 EA 414
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 99/239 (41%), Gaps = 70/239 (29%)
Query: 31 GDYSENQPSKSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSG-SD 89
G++ P FPG +FR++ K+ G+IG+ GE + ++ ++T +RV + G +
Sbjct: 74 GEFRPRWPG--FPGASVFRLVVAGDKVGGLIGRRGETIRRLCEETRARVRVLDPADGVAG 131
Query: 90 ERLVVIEAS-DNKKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLN 148
+++V+I A+ + + E + ++A+I K VNE ++G+N
Sbjct: 132 QQIVLISATEETQAELAPAMDAAI-------------------KIFKHVNE----IEGIN 168
Query: 149 SEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCV 208
+ S PE A RLLV Q L+GK G +
Sbjct: 169 ASVTFSASA--------------PEICSA------------RLLVPKEQAAHLIGKQGIM 202
Query: 209 IKQI-------------DKLPTCALASDEVVQITG----EVDTVRKALKLISHQLLDNS 250
IK I D L + + +V+I G ++ ++ L L+ L+D+S
Sbjct: 203 IKSIQETTGSTIRIIDKDDLLNYRMVDERIVEILGASLKALNALKSVLGLLRKFLVDHS 261
>gi|307108077|gb|EFN56318.1| hypothetical protein CHLNCDRAFT_57590 [Chlorella variabilis]
Length = 688
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 125/570 (21%), Positives = 195/570 (34%), Gaps = 200/570 (35%)
Query: 190 RLLVLSTQVGCLLGKGGCVIKQI-------------DKLPTCALASDEVVQITGEVDTVR 236
RLLV S+ VG L+G+GG IK +LP CA DEVV++ G +
Sbjct: 200 RLLVDSSVVGFLVGRGGATIKDTMARSGAGVRILPKAELPACACLGDEVVRVVGSCEAAC 259
Query: 237 KALKLISHQLLDNSPRDHESIPGNPTGPSH-PLPDHSVSSQGAPYATGHRDVADIHLPMP 295
AL+L++ Q+ + R P + LP + G H DVA +H +
Sbjct: 260 AALRLLASQIKAHVLRHGPPPPSPSYPGAPGALPPLMLGQAG----HHHPDVAFLHPSLA 315
Query: 296 PSIPKFHESGVLDRPKP-----SPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDI 350
+ + P P + +TFRLL R G +IGKGG +R ++ ETG I
Sbjct: 316 AAAFYPPPASPAGLPPPPAFSGAAVEVTFRLLAPTNRTGNIIGKGGEHVRRVRTETGARI 375
Query: 351 KVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVAS 410
KV + G+E+R
Sbjct: 376 KVFDPAPGSEER------------------------------------------------ 387
Query: 411 NQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKC------------------------ 446
+G +LGK G+ ++++R+ +GA I++L D +P
Sbjct: 388 ASVGMVLGKRGATVSQLRQETGAAIKVLNADLVPPAYGGGLGSDDSEAELGSISSGGGGS 447
Query: 447 ----------------ASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFP------ 484
+ EEVV + G + AL + T LR R
Sbjct: 448 SGGGVASGAGTASSGMSGGGEEVVQVEGSLQQCVAALRGVATLLRGWQVRRLLAHHHHAA 507
Query: 485 -------------------SINRPLNPTFLDQVSP---------FPSFIGR--RELSPPG 514
+PL+PT +SP PS +G + PP
Sbjct: 508 FGGGMAAGAAAAALQQQAALAQQPLSPTAGGMLSPSSPGMLGLHLPSSLGSLGSPVQPPF 567
Query: 515 MYSN--FGPSFHKF-----DAVGGPPPPGSFHPHDDHSA-FMHHIHRPGMPPHMPDMKPW 566
+ N G + DA+ GPPP G A +++H+
Sbjct: 568 LLMNGHLGGQQQQAGMLPPDALAGPPPGGHLSQQAQRGATYVYHLSN------------- 614
Query: 567 GPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITD 626
+VG +G + GA + QIR +S A++ +
Sbjct: 615 -----AQVGAVLG--------------------------KGGAHIAQIRSMSGARVQLQG 643
Query: 627 PKPGATETVIIISGTPEQTHAAQSLIQAFV 656
V++++G PEQ HAA ++ AF+
Sbjct: 644 EGE-GGGRVLMVAGQPEQCHAAHTMANAFL 672
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 51/82 (62%)
Query: 399 EQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLING 458
+++V RLLV S+ +G L+G+GG+ I + SGA +RIL K ++P CA +EVV + G
Sbjct: 194 QRSVEARLLVDSSVVGFLVGRGGATIKDTMARSGAGVRILPKAELPACACLGDEVVRVVG 253
Query: 459 EFEAVQEALFQITTRLRHHFFR 480
EA AL + ++++ H R
Sbjct: 254 SCEAACAALRLLASQIKAHVLR 275
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVI 95
+ R+LCP + + +IGK GE + +I +++G T+ V + V G DER+V I
Sbjct: 31 LRLRLLCPHALVPALIGKKGENVKRIRRESGATLSVADPVLGCDERVVHI 80
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Query: 38 PSKSFPGG---IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVV 94
P +F G + FR+L P ++ +IGK GE + ++ +TG I+V + GS+ER V
Sbjct: 331 PPPAFSGAAVEVTFRLLAPTNRTGNIIGKGGEHVRRVRTETGARIKVFDPAPGSEERASV 390
Query: 95 IEASDNKKETSENLE 109
+ T L
Sbjct: 391 GMVLGKRGATVSQLR 405
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 33/54 (61%)
Query: 587 PHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISG 640
P R+ ++ P +LVP + G+ G +K+IR+ S A +++ DP G E V+ I G
Sbjct: 29 PALRLRLLCPHALVPALIGKKGENVKRIRRESGATLSVADPVLGCDERVVHIMG 82
Score = 38.9 bits (89), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 303 ESGVLDRPKPSPEI--LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTE 360
++G++ PE+ L RLLC V +IGK G ++ +++E+G + V + V G +
Sbjct: 15 QNGMMGLSDTEPEVPALRLRLLCPHALVPALIGKKGENVKRIRRESGATLSVADPVLGCD 74
Query: 361 DRLIVISG 368
+R++ I G
Sbjct: 75 ERVVHIMG 82
>gi|410900025|ref|XP_003963497.1| PREDICTED: poly(rC)-binding protein 2-like [Takifugu rubripes]
Length = 318
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 110/242 (45%), Gaps = 40/242 (16%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI 212
T+ + KA ++ E++ E + T + + T +RL+V ++Q G L+GKGGC IK+I
Sbjct: 65 TTSIFKAFSMIIEKLEE-DISTSMTNSTATSKPPVTIRLVVPASQCGSLIGKGGCKIKEI 123
Query: 213 ------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGN 260
D LP +++ + I G ++ + +K I +L++ P+ +IP
Sbjct: 124 RESAGAQVQVAGDMLPN---STERAITIAGTPQSIIECVKQICVVMLESPPKG-VTIPYR 179
Query: 261 PTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKP-------- 312
P P+ + + G YA V H P + K H+ + P P
Sbjct: 180 PKPSGSPV----IFAGGQAYA-----VQGQHAIPQPDLTKLHQLAMQQSPFPIAHSNQGF 230
Query: 313 ------SPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVI 366
S + + L ++ +G +IG+ GA I ++Q +G IK+ V G+ DR + I
Sbjct: 231 QAGMDASAQTGSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTI 290
Query: 367 SG 368
+G
Sbjct: 291 TG 292
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 87/157 (55%), Gaps = 11/157 (7%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT--TSIF 69
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I+ ++ ++ + V RL+V ++Q G L+GKGG I E+R+ +GA
Sbjct: 70 KAFSMIIEKLEEDISTSMTNSTATSKPPVTIRLVVPASQCGSLIGKGGCKIKEIRESAGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
+++ G D +P + E + I G +++ E + QI
Sbjct: 130 QVQVAG-DMLP---NSTERAITIAGTPQSIIECVKQI 162
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 39/67 (58%)
Query: 593 VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLI 652
+ +P L+ I G GA + +IRQ+S A+I I +P G+T+ + I+G+ A+ LI
Sbjct: 245 LTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSHASISLAEYLI 304
Query: 653 QAFVMSE 659
A + SE
Sbjct: 305 NARLSSE 311
Score = 39.3 bits (90), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 396 DNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVL 455
D QT L + ++ IGC++G+ G+ I E+R++SGA I+I P S + +V
Sbjct: 235 DASAQTGSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN----PVEGSTDRQVT- 289
Query: 456 INGEFEAVQEALFQITTRL 474
I G ++ A + I RL
Sbjct: 290 ITGSHASISLAEYLINARL 308
>gi|402083824|gb|EJT78842.1| hypothetical protein GGTG_03937 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 373
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 144/362 (39%), Gaps = 64/362 (17%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT R + + G +IGKGG + L+ ETG V + V G DR++ I+G
Sbjct: 46 LTVRAIVSSKEAGVIIGKGGKNVADLRDETGVRAGVSKVVQGVHDRVLTITGGC------ 99
Query: 377 SAPQDAVLRVQTRIARAIPDNREQTVM-----------TRLLVASNQIGCLLGKGGSIIA 425
DA+ + +ARA+ + M +LL++ NQ+G ++G+ G I
Sbjct: 100 ----DAISKAYAIVARALLEGAPTLGMGGVVQSNGTHPIKLLISHNQMGTIIGREGLKIK 155
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPS 485
++ +SG + + KD +P+ NE VV + G E +Q A+++I L + R
Sbjct: 156 HIQDVSGVRM-VAQKDMLPQS---NERVVEVQGTPEGIQRAVWEICKCLIDDWQRATGTV 211
Query: 486 INRPLNPTFLDQVSPFPSF-IGRRELSPPGMYSNFGPS------FHKFDAVGGPPPPGSF 538
+ NP Q P G + G ++G S + D G P
Sbjct: 212 L---YNPAVRTQPGGAPPLTTGGPGYNSTGARGDYGSSPRVTRTGNGADFSNGSTPRLYN 268
Query: 539 HPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRS 598
D +A G P H D G + + +P +
Sbjct: 269 RRSDSDAA------NRGPPTH----------------------DENGEEIQTQNISIPAN 300
Query: 599 LVPIIQGEDGACLKQIRQISDAKITITD-PKPGATETVIIISGTPEQTHAAQSLIQAFVM 657
+V I G G+ + +IR+ S A+I+I P E + I G+ + +A L+ +
Sbjct: 301 MVGCIIGRAGSKISEIRKASGARISIAKAPHDETGERMFTIMGSAKANESALFLLYENLE 360
Query: 658 SE 659
+E
Sbjct: 361 AE 362
Score = 42.7 bits (99), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 108/249 (43%), Gaps = 31/249 (12%)
Query: 156 VQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKL 215
+ KA +V ++E P + + + ++LL+ Q+G ++G+ G IK I +
Sbjct: 102 ISKAYAIVARALLEGAPTLGMGGVVQSNGT-HPIKLLISHNQMGTIIGREGLKIKHIQDV 160
Query: 216 PTCAL---------ASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSH 266
+ +++ VV++ G + +++A+ I L+D+ R ++ NP +
Sbjct: 161 SGVRMVAQKDMLPQSNERVVEVQGTPEGIQRAVWEICKCLIDDWQRATGTVLYNPAVRTQ 220
Query: 267 PLPDHSVSSQGAPY-ATGHR-------------DVADIHLPMPPSI-PKFHESGVLDRPK 311
P +++ G Y +TG R + AD P + + +S +R
Sbjct: 221 PGGAPPLTTGGPGYNSTGARGDYGSSPRVTRTGNGADFSNGSTPRLYNRRSDSDAANRGP 280
Query: 312 PS-----PEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA-VSGTEDRLIV 365
P+ EI T + VG +IG+ G+ I +++ +G I + +A T +R+
Sbjct: 281 PTHDENGEEIQTQNISIPANMVGCIIGRAGSKISEIRKASGARISIAKAPHDETGERMFT 340
Query: 366 ISGPAHPDD 374
I G A ++
Sbjct: 341 IMGSAKANE 349
>gi|71897277|ref|NP_001026556.1| heterogeneous nuclear ribonucleoprotein K [Gallus gallus]
gi|75571241|sp|Q5ZIQ3.1|HNRPK_CHICK RecName: Full=Heterogeneous nuclear ribonucleoprotein K;
Short=hnRNP K
gi|53135051|emb|CAG32390.1| hypothetical protein RCJMB04_24e23 [Gallus gallus]
Length = 427
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 99/416 (23%), Positives = 155/416 (37%), Gaps = 80/416 (19%)
Query: 301 FHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTE 360
E R + + E++ R+L + G VIGKGG I++L+ + + V ++ SG E
Sbjct: 24 MEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDS-SGPE 82
Query: 361 DRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQT-----VMTRLLVASNQIGC 415
L ISA + + + +I + + + RLL+ + G
Sbjct: 83 RIL-----------SISADTETIGEILKKIIPTLEEYQHYKGSDFDCELRLLIHQSLAGG 131
Query: 416 LLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLR 475
++G G+ I E+R+ + I++ + C + VVLI G+ + V E + I +
Sbjct: 132 IIGVKGAKIKELRENTQTTIKLFQE----CCPHSTDRVVLIGGKPDRVVECIKIILDLIS 187
Query: 476 HHFFRDAFPSINRPLNPTFLDQVSPFPSF---IGRRELSPPGMYSNFGPSFHKF-DAVGG 531
+P +P F D+ + F R P G F + GG
Sbjct: 188 ES----PIKGRAQPYDPNFYDETYDYGGFTMMFDDRRGRPVGFPMRGRGGFDRMPPNRGG 243
Query: 532 PPPPGSFHPHDDHSA----------------------------------FMHHIH--RPG 555
P P S +DD S M + RPG
Sbjct: 244 RPMPPSRRDYDDMSPRRGPPPPPPGRGGRGGSRARNLPLPPPPPPRGGDLMSYDRRGRPG 303
Query: 556 -------MPPHMPDMKPWGPQGLMEVG--------GPMGFPDFVGPPHRRVPVVVPRSLV 600
M H+ P L E G G G +G P V +P+ L
Sbjct: 304 DRYDGMMMQCHVDACDDMQPPELFEGGSGYDYSYAGGRGSYGDLGGPIITTQVTIPKDLA 363
Query: 601 PIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFV 656
I G+ G +KQIR S A I I +P G+ + +I I+GT +Q AQ L+Q V
Sbjct: 364 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSV 419
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 38/63 (60%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
I +V P +IGK G+ + QI ++G +I+++E + GS++R++ I + ++ + +
Sbjct: 352 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNA 411
Query: 106 ENL 108
+ L
Sbjct: 412 QYL 414
>gi|405120191|gb|AFR94962.1| cytoplasmic protein [Cryptococcus neoformans var. grubii H99]
Length = 365
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 153/362 (42%), Gaps = 45/362 (12%)
Query: 312 PSPEI------LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIV 365
PSP+ L+ R L + G +IGK GA I +++ TG V + V G +DR++
Sbjct: 20 PSPDAQGAEHQLSLRSLVSTKEAGIIIGKSGATIATIRDSTGVKAGVSKVVQGVQDRVLS 79
Query: 366 ISGPAHPDDRISAPQDAVLRVQTRIARAI--PDNREQTVMTRLLVASNQIGCLLGKGGSI 423
++G A + A L ++T ++ + P RLL++ N +G ++G+ G
Sbjct: 80 VTGDLEGVASAYA-EVARLLLETPLSDSSLPPPPVGSFTSIRLLISHNLMGTVIGRSGLK 138
Query: 424 IAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAF 483
I +++ +SGA + + K+ +P+ E VV + G +A++ A+ +I L + R A
Sbjct: 139 IKQIQDMSGARM-VASKEMLPQS---TERVVEVQGSVDAIKTAVLEIGKCLLEDWDRGAG 194
Query: 484 PSINRPLNPTFLDQVSPFPSFIGRREL--SPPGM-YSNFGPSFHKFDAVGGPPPPGSFHP 540
+ +P +G + + S G+ ++ F + P GS
Sbjct: 195 TVL---YHPGAAGDAGVLAGGLGAQAVTGSTGGIRRTSVAAGFGGYSGDRRPSRGGSISG 251
Query: 541 HDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLV 600
S RP P + + P R + +P +V
Sbjct: 252 PSGVSGE----RRPSEGPQV---------------------NLNDPNLRTQNISIPSDMV 286
Query: 601 PIIQGEDGACLKQIRQISDAKITITD-PKPGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
I G G+ + +IR++S ++I+I P E + I GTPE T A L+ + + SE
Sbjct: 287 GCIIGRGGSKITEIRRLSGSRISIAKVPHDETGERMFTIQGTPEATERALMLLYSQLESE 346
Query: 660 TE 661
E
Sbjct: 347 KE 348
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 92/224 (41%), Gaps = 45/224 (20%)
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQIDKLPTCAL---------ASDEVVQITGEVDTVRKAL 239
+RLL+ +G ++G+ G IKQI + + +++ VV++ G VD ++ A+
Sbjct: 119 IRLLISHNLMGTVIGRSGLKIKQIQDMSGARMVASKEMLPQSTERVVEVQGSVDAIKTAV 178
Query: 240 KLISHQLLDNSPRDHESIPGNP------------------TGPSHPLPDHSVSSQGAPYA 281
I LL++ R ++ +P TG + + SV++ Y+
Sbjct: 179 LEIGKCLLEDWDRGAGTVLYHPGAAGDAGVLAGGLGAQAVTGSTGGIRRTSVAAGFGGYS 238
Query: 282 TGHRDVADIHLPMPPSIPKFHESGVLDRPKPS---------PEILTFRLLCHDERVGGVI 332
R + P SGV +PS P + T + + VG +I
Sbjct: 239 GDRRPSRGGSISGP--------SGVSGERRPSEGPQVNLNDPNLRTQNISIPSDMVGCII 290
Query: 333 GKGGAIIRSLKQETGCDIKVMEA-VSGTEDRLIVISGPAHPDDR 375
G+GG+ I +++ +G I + + T +R+ I G +R
Sbjct: 291 GRGGSKITEIRRLSGSRISIAKVPHDETGERMFTIQGTPEATER 334
>gi|345780248|ref|XP_003431966.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 3
[Canis lupus familiaris]
Length = 441
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 155/363 (42%), Gaps = 75/363 (20%)
Query: 163 VFERMVEVEPETEVADQENTKSSK--------FVLRLLVLSTQVGCLLGKGGCVIKQIDK 214
V E +V ++E A T SSK L++L + VG L+GK G +K+I++
Sbjct: 106 VVESCEQVNTDSETAVVNVTYSSKDQARHTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQ 165
Query: 215 ----------LPTCALASDE-VVQITGEVDTVRKALKLISHQLLDNSPRDHES------- 256
L L + E + + G V+T KA + I ++ ++ D S
Sbjct: 166 DTDTKITISPLQELTLYNPERTITVKGNVETCAKAEEEIMKKIRESYENDIASMNLQAHL 225
Query: 257 IPG---NPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPS 313
IPG N G P + G P A M P P+F ++
Sbjct: 226 IPGLNLNALGLFPPTSGMPPPTSGPPSA------------MTPPYPQFEQA--------- 264
Query: 314 PEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHP 372
P+ T L VG +IGK G I+ L + G IK+ A + + R+++I+GP
Sbjct: 265 PQTETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPP-- 322
Query: 373 DDRISAPQDAVLRVQTRIARAIPD------NREQTVMTRLLVASNQIGCLLGKGGSIIAE 426
+A + Q RI I + E + + V S G ++GKGG + E
Sbjct: 323 --------EAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNE 374
Query: 427 MRKLSGAYIRILGKDQIPKCASENEEVVL-INGEFEAVQEA---LFQITTRLRHHFFRDA 482
++ LS A + ++ +DQ P EN++VV+ I G F A Q A + +I T+++ H + A
Sbjct: 375 LQNLSSAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVKQHQQQKA 430
Query: 483 FPS 485
S
Sbjct: 431 LQS 433
>gi|358398587|gb|EHK47938.1| hypothetical protein TRIATDRAFT_47313 [Trichoderma atroviride IMI
206040]
Length = 369
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 139/361 (38%), Gaps = 66/361 (18%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT R + + G +IGKGG + L+ ETG V + V G DR++ I+G
Sbjct: 46 LTLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTITGGC------ 99
Query: 377 SAPQDAVLRVQTRIARAIPDNREQTVM-----------TRLLVASNQIGCLLGKGGSIIA 425
DA+ R +ARA+ + M +LL++ NQ+G ++G+ G I
Sbjct: 100 ----DAISRAYAIVARALLEGAPAVGMGGIVQGNGTHPIKLLISHNQMGTIIGRQGLKIK 155
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPS 485
++ SG + + K+ +P+ E VV + G E +Q A+++I+ L + R
Sbjct: 156 HIQDTSGVRM-VAQKEMLPQS---TERVVEVQGTPEGIQRAIWEISKCLVDDWQRGTGTV 211
Query: 486 INRPLNPT------FLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFH 539
+ P+ T + SP M + G F GG P F
Sbjct: 212 LYNPVVRTQTSGSGSMSGTGYGNGGGRGDYGSPRVMRTGNGADFSN----GGSRP---FS 264
Query: 540 PHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSL 599
D A G P H D G + + +P +
Sbjct: 265 RRSDSDAATR-----GPPTH----------------------DENGEEIQTQNISIPADM 297
Query: 600 VPIIQGEDGACLKQIRQISDAKITITD-PKPGATETVIIISGTPEQTHAAQSLIQAFVMS 658
V I G G+ + IR+ S A+I+I P E + I GT + +A L+ + +
Sbjct: 298 VGCIIGRGGSKISDIRKTSGARISIAKAPHDETGERMFTIMGTAKANESALFLLYENLEA 357
Query: 659 E 659
E
Sbjct: 358 E 358
Score = 39.3 bits (90), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 92/223 (41%), Gaps = 48/223 (21%)
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQIDKLPTCAL---------ASDEVVQITGEVDTVRKAL 239
++LL+ Q+G ++G+ G IK I + +++ VV++ G + +++A+
Sbjct: 134 IKLLISHNQMGTIIGRQGLKIKHIQDTSGVRMVAQKEMLPQSTERVVEVQGTPEGIQRAI 193
Query: 240 KLISHQLLDNSPRDHESIPGNPTGPSHPL---------------------PDHSVSSQGA 278
IS L+D+ R ++ NP + P + GA
Sbjct: 194 WEISKCLVDDWQRGTGTVLYNPVVRTQTSGSGSMSGTGYGNGGGRGDYGSPRVMRTGNGA 253
Query: 279 PYATG------HRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVI 332
++ G R +D PP+ E+G EI T + + VG +I
Sbjct: 254 DFSNGGSRPFSRRSDSDAATRGPPT---HDENG--------EEIQTQNISIPADMVGCII 302
Query: 333 GKGGAIIRSLKQETGCDIKVMEA-VSGTEDRLIVISGPAHPDD 374
G+GG+ I +++ +G I + +A T +R+ I G A ++
Sbjct: 303 GRGGSKISDIRKTSGARISIAKAPHDETGERMFTIMGTAKANE 345
>gi|296825084|ref|XP_002850758.1| KH domain RNA-binding protein [Arthroderma otae CBS 113480]
gi|238838312|gb|EEQ27974.1| KH domain RNA-binding protein [Arthroderma otae CBS 113480]
Length = 367
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 149/361 (41%), Gaps = 67/361 (18%)
Query: 316 ILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDR 375
+LT R + + G +IGK G + L+ ETG V + V G DR++ ++GP +
Sbjct: 47 MLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGPLQGTSK 106
Query: 376 -ISAPQDAVLRV--QTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSG 432
S ++L Q + + +N +V RLL++ NQ+G ++G+ G I ++ SG
Sbjct: 107 AYSIVAKSLLEGAPQMGMGGVVQNNGTHSV--RLLISHNQMGTIIGRQGLKIKYIQDASG 164
Query: 433 AYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNP 492
+ + K+ +P+ E +V + G E +++A+++I L + R + NP
Sbjct: 165 VRM-VAQKEMLPQST---ERIVEVQGTPEGIEKAIWEIGKCLIDDWQRGTGTVL---YNP 217
Query: 493 TFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIH 552
V P + S G ++G + ++ G + + F H
Sbjct: 218 AVRASVGSGPG-----QASAAGSNPSYGGNSRSYNRTG------------NGADFSDH-- 258
Query: 553 RPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVV-------------VPRSL 599
PG +G +G + P+R +P+V +P +
Sbjct: 259 -PG---------SYGRRGNND------------NPNRGIPLVTEDGEEVQTQNISIPSDM 296
Query: 600 VPIIQGEDGACLKQIRQISDAKITITD-PKPGATETVIIISGTPEQTHAAQSLIQAFVMS 658
V I G G + +IR+ S A+I+I P E + I G+ + A L+ + +
Sbjct: 297 VGCIIGRGGTKISEIRRSSGARISIAKAPHDDTGERMFTIMGSAQANEKALYLLYENLEA 356
Query: 659 E 659
E
Sbjct: 357 E 357
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 102/245 (41%), Gaps = 32/245 (13%)
Query: 158 KALLLVFERMVEVEPETEVAD--QENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKL 215
KA +V + ++E P+ + Q N S +RLL+ Q+G ++G+ G IK I
Sbjct: 106 KAYSIVAKSLLEGAPQMGMGGVVQNNGTHS---VRLLISHNQMGTIIGRQGLKIKYIQDA 162
Query: 216 PTCAL---------ASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNP----- 261
+ +++ +V++ G + + KA+ I L+D+ R ++ NP
Sbjct: 163 SGVRMVAQKEMLPQSTERIVEVQGTPEGIEKAIWEIGKCLIDDWQRGTGTVLYNPAVRAS 222
Query: 262 --TGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRP--------K 311
+GP S S G + +R P + G D P +
Sbjct: 223 VGSGPGQASAAGSNPSYGGNSRSYNRTGNGADFSDHPG--SYGRRGNNDNPNRGIPLVTE 280
Query: 312 PSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA-VSGTEDRLIVISGPA 370
E+ T + + VG +IG+GG I +++ +G I + +A T +R+ I G A
Sbjct: 281 DGEEVQTQNISIPSDMVGCIIGRGGTKISEIRRSSGARISIAKAPHDDTGERMFTIMGSA 340
Query: 371 HPDDR 375
+++
Sbjct: 341 QANEK 345
>gi|121710178|ref|XP_001272705.1| KH domain RNA binding protein [Aspergillus clavatus NRRL 1]
gi|119400855|gb|EAW11279.1| KH domain RNA binding protein [Aspergillus clavatus NRRL 1]
Length = 464
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 150/375 (40%), Gaps = 50/375 (13%)
Query: 309 RPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
RP+ + R + + VIGKGG + +++ +G V + G +R++ +SG
Sbjct: 104 RPQDESSWIHIRAVISSQEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSG 163
Query: 369 PAHPDDRISAPQDAVLRVQTRIARAIPDN--------REQTVMTRLLVASNQIGCLLGKG 420
PQDAV + I R + + + +T RLL+ IG ++GKG
Sbjct: 164 ----------PQDAVAKAFGLIIRTLNNEPLDAPSTAQSKTYPLRLLIPHILIGSIIGKG 213
Query: 421 GSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFF- 479
GS I E+++ SGA R+ D ++E V+L G ++V A + + L
Sbjct: 214 GSRIREIQEASGA--RLNASDACLPLSTERSLVIL--GVADSVHIATYYVAVTLVEQLTE 269
Query: 480 RDAFPSINRPLNPTFLD--------QVSPFPSFIGRRELSPPGMYSNFGPSFHK--FDAV 529
R P+ + + QV P+ + P + P ++ A
Sbjct: 270 RFGGPAASAYATRSGGPAGAVPGGMQVVPYVPQPAGGQYGHPETFKRHHPHPNRAAAGAY 329
Query: 530 GGPPPPGSFHPHDDHSAFMHHIHRPGMP-----PHMPDMKPWGPQGLMEVGGPMGFPDFV 584
G P G P +H+ P P PH P P G + G P
Sbjct: 330 GVPYLHGQPAPAPVAQPALHYGATPHTPYAGAGPHQP-----APYGAPQPAQSRGAPTPA 384
Query: 585 GPPHRRVP-------VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVII 637
P +P + +P +V I G+ GA + +IR +S + I I +P+ + E ++
Sbjct: 385 TPAGGVMPGQPLTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQENSNERLVT 444
Query: 638 ISGTPEQTHAAQSLI 652
I+GT E A ++
Sbjct: 445 ITGTQECNQMALYML 459
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 400 QTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGE 459
Q + ++ + ++ +G ++GKGG+ I E+R LSG+ I+I + + NE +V I G
Sbjct: 394 QPLTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQE-----NSNERLVTITGT 448
Query: 460 FEAVQEALFQITTRL 474
E Q AL+ + +RL
Sbjct: 449 QECNQMALYMLYSRL 463
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 112/289 (38%), Gaps = 85/289 (29%)
Query: 156 VQKALLLVFERMVEVEPETEVADQENTKSSK-FVLRLLVLSTQVGCLLGKGGCVIKQIDK 214
V KA L+ R + EP D +T SK + LRLL+ +G ++GKGG I++I +
Sbjct: 168 VAKAFGLII-RTLNNEP----LDAPSTAQSKTYPLRLLIPHILIGSIIGKGGSRIREIQE 222
Query: 215 LPTCAL-ASDEVVQITGE-------------VDTVRKALKLISH---------------- 244
L ASD + ++ E + T A+ L+
Sbjct: 223 ASGARLNASDACLPLSTERSLVILGVADSVHIATYYVAVTLVEQLTERFGGPAASAYATR 282
Query: 245 ------------QLLDNSPRDHESIPGNPTG--PSHPLPDHSVS-SQGAPY--------- 280
Q++ P+ G+P HP P+ + + + G PY
Sbjct: 283 SGGPAGAVPGGMQVVPYVPQPAGGQYGHPETFKRHHPHPNRAAAGAYGVPYLHGQPAPAP 342
Query: 281 ---------ATGHRDVADI--HLPMPPSIPKFHESGVLDRPKPSPEI----------LTF 319
AT H A H P P P+ +S R P+P LT
Sbjct: 343 VAQPALHYGATPHTPYAGAGPHQPAPYGAPQPAQS----RGAPTPATPAGGVMPGQPLTQ 398
Query: 320 RLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
++ ++ VG +IGKGGA I ++ +G IK+ E + +RL+ I+G
Sbjct: 399 QIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQENSNERLVTITG 447
>gi|336465527|gb|EGO53767.1| hypothetical protein NEUTE1DRAFT_119308 [Neurospora tetrasperma
FGSC 2508]
gi|350295174|gb|EGZ76151.1| eukaryotic type KH-domain (KH-domain type I) [Neurospora
tetrasperma FGSC 2509]
Length = 481
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 148/371 (39%), Gaps = 46/371 (12%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
+ R + +IGKGG + +++ + V + G +R++ +SG D +
Sbjct: 125 IHVRSVISSPEAATIIGKGGENVSKIREMSNAKCTVSDYQKGAVERILTVSGVV---DAV 181
Query: 377 SAPQDAVLRVQTRIARAIPDN-REQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYI 435
+ ++R A P N +T RLL+ IG ++GKGG+ I E+++ SGA
Sbjct: 182 AKAFGLIIRTLNNEPLAEPSNTHSKTYPLRLLIPHVLIGSIIGKGGARIKEIQEASGA-- 239
Query: 436 RILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRL-------------RHHFFRDA 482
R+ D ++E VV+ G +AV A + + + L + R
Sbjct: 240 RLNASDSCLPLSTERSLVVM--GVADAVHIATYYVGSTLLEQLNERFGGPAASAYATRSG 297
Query: 483 FPSINRPLNPTFLDQV-SPFPSFIGRRELSPPGMYSNFGP---SFHKFDAVGGPPPPGSF 538
P+ + P + V P G R+ N GP S H P P G+
Sbjct: 298 GPAASIPGGLQVVPYVPQPAGGNFGNRDY----YQRNRGPDPRSHHGMPPSQYPAPYGAP 353
Query: 539 HPHDDHSAF----------MHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPH 588
HP + A + P + PH+ P GP G P V
Sbjct: 354 HPAQPNPAVPMHYGAHAAGGYGAAAPHVAPHVGHAGP-----APHAAGPHGAP--VAGAA 406
Query: 589 RRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAA 648
+ +P +V I G+ G + +IRQIS + I I +P+ + E ++ I+GT E A
Sbjct: 407 LTQQIYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQDNSNERLVTITGTEECNRMA 466
Query: 649 QSLIQAFVMSE 659
L+ + SE
Sbjct: 467 LYLLYQRLESE 477
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 13/102 (12%)
Query: 156 VQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKL 215
V KA L+ R + EP +A+ NT S + LRLL+ +G ++GKGG IK+I +
Sbjct: 181 VAKAFGLII-RTLNNEP---LAEPSNTHSKTYPLRLLIPHVLIGSIIGKGGARIKEIQEA 236
Query: 216 PTCAL-ASDEVVQIT--------GEVDTVRKALKLISHQLLD 248
L ASD + ++ G D V A + LL+
Sbjct: 237 SGARLNASDSCLPLSTERSLVVMGVADAVHIATYYVGSTLLE 278
>gi|322796009|gb|EFZ18633.1| hypothetical protein SINV_09712 [Solenopsis invicta]
Length = 440
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 85/172 (49%), Gaps = 34/172 (19%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RL+ + VG +IGK G I++ ++E+G I + + +R++ ++GP
Sbjct: 18 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTVTGPT------ 69
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT------------------VMTRLLVASNQIGCLLG 418
+++ + T I + + Q + RL+V ++Q G L+G
Sbjct: 70 ----NSIFKAFTLICKKFEEWCSQFHDIQGGGAGGGGGVSRPPITLRLIVPASQCGSLIG 125
Query: 419 KGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
KGGS I E+R+++GA I++ + +P + E V I+G EA+ + ++ I
Sbjct: 126 KGGSKIKEIREVTGASIQV-ASEMLP---NSTERAVTISGTSEAITQCIYHI 173
Score = 47.0 bits (110), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 397 NREQTVMTR----LLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEE 452
NR+Q + V + IGC++GKGG+ IAE+R++SGA IRI ++ + +
Sbjct: 362 NRQQPAANNQTHEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGATDR 419
Query: 453 VVLINGEFEAVQEALFQITTR 473
+ I G +AV A + I R
Sbjct: 420 TITITGNPDAVALAQYLINMR 440
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 593 VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKP---GATETVIIISGTPEQTHAAQ 649
+ VP L+ I G+ G + +IRQIS A I I++ + GAT+ I I+G P+ AQ
Sbjct: 375 MTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVALAQ 434
Query: 650 SLIQ 653
LI
Sbjct: 435 YLIN 438
Score = 39.3 bits (90), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 56/117 (47%), Gaps = 14/117 (11%)
Query: 187 FVLRLLVLSTQVGCLLGKGGCVIKQIDKLPTCAL---------ASDEVVQITGEVDTVRK 237
LRL+V ++Q G L+GKGG IK+I ++ ++ +++ V I+G + + +
Sbjct: 109 ITLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASEMLPNSTERAVTISGTSEAITQ 168
Query: 238 ALKLISHQLLDNSPRDHESIPGNPT----GPSHPLPDHSVSSQGAPYATGHRDVADI 290
+ I +L++ P+ +IP P GP + + QG H DV+ +
Sbjct: 169 CIYHICCVMLESPPKG-ATIPYRPKPQVGGPVILAGGQAYTIQGNYAVPAHSDVSTV 224
>gi|58266068|ref|XP_570190.1| cytoplasm protein [Cryptococcus neoformans var. neoformans JEC21]
gi|134110914|ref|XP_775921.1| hypothetical protein CNBD3280 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50258587|gb|EAL21274.1| hypothetical protein CNBD3280 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57226423|gb|AAW42883.1| cytoplasm protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 365
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 153/362 (42%), Gaps = 45/362 (12%)
Query: 312 PSPEI------LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIV 365
PSP+ L+ R L + G +IGK GA I +++ TG V + V G +DR++
Sbjct: 20 PSPDAHGAEHQLSLRSLVSTKEAGIIIGKSGATIATIRDSTGVKAGVSKVVQGVQDRVLS 79
Query: 366 ISGPAHPDDRISAPQDAVLRVQTRIARAI--PDNREQTVMTRLLVASNQIGCLLGKGGSI 423
++G A + A L ++T ++ + P RLL++ N +G ++G+ G
Sbjct: 80 VTGDLEGVASAYA-EVARLLLETPLSDSSLPPPPVGSFTSIRLLISHNLMGTVIGRSGLK 138
Query: 424 IAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAF 483
I +++ +SGA + + K+ +P+ E VV + G +A++ A+ +I L + R A
Sbjct: 139 IKQIQDMSGARM-VASKEMLPQS---TERVVEVQGSVDAIKTAVLEIGKCLLEDWDRGAG 194
Query: 484 PSINRPLNPTFLDQVSPFPSFIGRREL--SPPGM-YSNFGPSFHKFDAVGGPPPPGSFHP 540
+ +P +G + + S G+ ++ F + P GS
Sbjct: 195 TVL---YHPGAAGDAGVLAGGLGAQAVTGSTGGIRRTSVAAGFGGYSGDRRPSRGGSISG 251
Query: 541 HDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLV 600
S RP P + + P R + +P +V
Sbjct: 252 PSGVSGE----RRPSEGPQV---------------------NLNDPNLRTQNISIPSDMV 286
Query: 601 PIIQGEDGACLKQIRQISDAKITITD-PKPGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
I G G+ + +IR++S ++I+I P E + I GTPE T A L+ + + SE
Sbjct: 287 GCIIGRGGSKITEIRRLSGSRISIAKVPHDETGERMFTIQGTPEATERALMLLYSQLESE 346
Query: 660 TE 661
E
Sbjct: 347 KE 348
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 92/224 (41%), Gaps = 45/224 (20%)
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQIDKLPTCAL---------ASDEVVQITGEVDTVRKAL 239
+RLL+ +G ++G+ G IKQI + + +++ VV++ G VD ++ A+
Sbjct: 119 IRLLISHNLMGTVIGRSGLKIKQIQDMSGARMVASKEMLPQSTERVVEVQGSVDAIKTAV 178
Query: 240 KLISHQLLDNSPRDHESIPGNP------------------TGPSHPLPDHSVSSQGAPYA 281
I LL++ R ++ +P TG + + SV++ Y+
Sbjct: 179 LEIGKCLLEDWDRGAGTVLYHPGAAGDAGVLAGGLGAQAVTGSTGGIRRTSVAAGFGGYS 238
Query: 282 TGHRDVADIHLPMPPSIPKFHESGVLDRPKPS---------PEILTFRLLCHDERVGGVI 332
R + P SGV +PS P + T + + VG +I
Sbjct: 239 GDRRPSRGGSISGP--------SGVSGERRPSEGPQVNLNDPNLRTQNISIPSDMVGCII 290
Query: 333 GKGGAIIRSLKQETGCDIKVMEA-VSGTEDRLIVISGPAHPDDR 375
G+GG+ I +++ +G I + + T +R+ I G +R
Sbjct: 291 GRGGSKITEIRRLSGSRISIAKVPHDETGERMFTIQGTPEATER 334
>gi|384490263|gb|EIE81485.1| hypothetical protein RO3G_06190 [Rhizopus delemar RA 99-880]
Length = 426
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 112/273 (41%), Gaps = 63/273 (23%)
Query: 154 SKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQID 213
S V KA LV E+++E T D + +++L+L+ ++G ++GK G VI+ I
Sbjct: 133 SAVAKAYALVAEKIIE--ENTLAEDNKGPIQQDVTIKILILANRMGSIIGKSGSVIRSIQ 190
Query: 214 KLPTCA---------LASDEVVQITGEVDTVRKALKLISHQLLD---------------- 248
+ L+++ VV I G D + +A+K I L+D
Sbjct: 191 ETSGAKVSAQEEPLPLSTERVVTIHGTPDAIEQAVKKIGDILVDQPNHHGNYMLYKPIAG 250
Query: 249 -----------NSPRDHESIPGNPTGPSHP---------------LPDHSVSSQGAPY-- 280
N R++ N SH LP ++S G Y
Sbjct: 251 AAPHTSSSNHGNGHRNYRRSNDNNNAASHAMPTAAAAAMMGYSGMLPMGNMSMNGFYYPP 310
Query: 281 -----ATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKG 335
+G R D LPM P + G L P+ + + ++ +E VG +IGKG
Sbjct: 311 TNYPGGSGGRQ-GDYPLPMMPGLSNLSMMGGLSNMMPATQ--SQQIYIPNEMVGCIIGKG 367
Query: 336 GAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
G I ++Q +G IK+ + + + +RLI I+G
Sbjct: 368 GMKINEIRQTSGSHIKIADPSTDSHERLITITG 400
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 84/160 (52%), Gaps = 16/160 (10%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
++ R L + G +IGKGG + ++ + + + + V G +R++ + GP +
Sbjct: 79 ISLRSLVGMKDAGLIIGKGGKNVSEIRDSSMARVNISDIVPGAAERILTVVGP------V 132
Query: 377 SAPQDAVLRVQTRIARA---IPDNR---EQTVMTRLLVASNQIGCLLGKGGSIIAEMRKL 430
SA A V +I DN+ +Q V ++L+ +N++G ++GK GS+I +++
Sbjct: 133 SAVAKAYALVAEKIIEENTLAEDNKGPIQQDVTIKILILANRMGSIIGKSGSVIRSIQET 192
Query: 431 SGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
SGA + ++ +P E VV I+G +A+++A+ +I
Sbjct: 193 SGAKVSAQ-EEPLPLST---ERVVTIHGTPDAIEQAVKKI 228
Score = 46.2 bits (108), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 42/82 (51%)
Query: 578 MGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVII 637
MG + P + + +P +V I G+ G + +IRQ S + I I DP + E +I
Sbjct: 338 MGGLSNMMPATQSQQIYIPNEMVGCIIGKGGMKINEIRQTSGSHIKIADPSTDSHERLIT 397
Query: 638 ISGTPEQTHAAQSLIQAFVMSE 659
I+GTPE A L+ + + +E
Sbjct: 398 ITGTPESNQMALYLLYSRLEAE 419
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 43/70 (61%), Gaps = 5/70 (7%)
Query: 405 RLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQ 464
++ + + +GC++GKGG I E+R+ SG++I+I P S +E ++ I G E+ Q
Sbjct: 352 QIYIPNEMVGCIIGKGGMKINEIRQTSGSHIKIAD----PSTDS-HERLITITGTPESNQ 406
Query: 465 EALFQITTRL 474
AL+ + +RL
Sbjct: 407 MALYLLYSRL 416
>gi|270001418|gb|EEZ97865.1| hypothetical protein TcasGA2_TC000237 [Tribolium castaneum]
Length = 415
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 86/172 (50%), Gaps = 30/172 (17%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RL+ + VG +IGK G I++ ++E+G I + + +R++ ++G
Sbjct: 15 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTVTGST------ 66
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT--------------VMTRLLVASNQIGCLLGKGGS 422
+A+ + T I + + Q + RL+V ++Q G L+GKGGS
Sbjct: 67 ----NAIFKAFTLICKKFEEWCSQFQDINSGGSGVPRPPITLRLIVPASQCGSLIGKGGS 122
Query: 423 IIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRL 474
I E+R+++GA I++ + +P + E V I+G EA+ + ++ I T +
Sbjct: 123 KIKEIREVTGASIQV-ASEMLP---NSTERAVTISGTGEAITQCIYHICTVM 170
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 53/90 (58%), Gaps = 4/90 (4%)
Query: 385 RVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIP 444
+++T +R ++ +QT + V + IGC++GKGG+ IAE+R++SGA IRI D
Sbjct: 304 QLRTSNSRNQQNSNQQT--HEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCDD-- 359
Query: 445 KCASENEEVVLINGEFEAVQEALFQITTRL 474
+ + + + I+G +AV A + I R+
Sbjct: 360 RESGVTDRTITISGNPDAVALAQYLINMRI 389
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 593 VVVPRSLVPIIQGEDGACLKQIRQISDAKITIT---DPKPGATETVIIISGTPEQTHAAQ 649
+ VP L+ I G+ G + +IRQIS A I I+ D + G T+ I ISG P+ AQ
Sbjct: 323 MTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCDDRESGVTDRTITISGNPDAVALAQ 382
Query: 650 SLIQAFVMSET 660
LI + ET
Sbjct: 383 YLINMRISMET 393
Score = 38.9 bits (89), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 70/152 (46%), Gaps = 16/152 (10%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA L+ ++ E + + + + + LRL+V ++Q G L+GKGG IK
Sbjct: 66 TNAIFKAFTLICKKFEEWCSQFQDINSGGSGVPRPPITLRLIVPASQCGSLIGKGGSKIK 125
Query: 211 QIDKLPTCAL---------ASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNP 261
+I ++ ++ +++ V I+G + + + + I +L++ P+ +IP P
Sbjct: 126 EIREVTGASIQVASEMLPNSTERAVTISGTGEAITQCIYHICTVMLESPPKG-ATIPYRP 184
Query: 262 T----GPSHPLPDHSVSSQGAPYATGHRDVAD 289
GP + + QG H DV+
Sbjct: 185 KPQVGGPVILAGGQAYTIQGNYAVPAHTDVSS 216
>gi|26353480|dbj|BAC40370.1| unnamed protein product [Mus musculus]
Length = 579
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 109/471 (23%), Positives = 192/471 (40%), Gaps = 112/471 (23%)
Query: 39 SKSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEAS 98
SK P + R+L P + +IGK+G + I++ T I
Sbjct: 189 SKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKI------------------- 229
Query: 99 DNKKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQK 158
+ R EN G E S+ L++ + TS K
Sbjct: 230 ------------DVHRKENTGAAEKSITI-------------------LSTPEGTSAACK 258
Query: 159 ALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDK---- 214
++L + + E D + T+ + L++L + VG L+GK G +K+I++
Sbjct: 259 SILEIMHK--------EAQDIKFTE--EIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDT 308
Query: 215 ------LPTCALASDE-VVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHP 267
L L + E + + G V+T KA + I ++ ++ D S+ ++
Sbjct: 309 KITISPLQELTLYNPERTITVKGSVETCAKAEEEIMKKIRESYENDIASM----NLQANL 364
Query: 268 LPDHSVSSQGA--PYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHD 325
+P ++++ G P + + + P P+F +S E T L
Sbjct: 365 IPGLNLNALGLFPPTSGMPPPTSGPPSTLTPPYPQFEQS----------ETETVHLFIPA 414
Query: 326 ERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRISAPQDAVL 384
VG +IGK G I+ L + G IK+ A + + R+++I+GP +A
Sbjct: 415 LSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPP----------EAQF 464
Query: 385 RVQTRIARAIPD------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRIL 438
+ Q RI I + E + + V S G ++GKGG + E++ LS A + ++
Sbjct: 465 KAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQSLSSAEV-VV 523
Query: 439 GKDQIPKCASENEEVVL-INGEFEAVQEA---LFQITTRLRHHFFRDAFPS 485
+DQ P EN++VV+ I G F A Q A + +I T+++ H + A S
Sbjct: 524 PRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVKQHQQQKALQS 571
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 83/183 (45%), Gaps = 11/183 (6%)
Query: 311 KPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV--MEAVSGTEDRLIVISG 368
K P L RLL + VG +IGK GA IR++ ++T I V E E + ++S
Sbjct: 190 KQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENTGAAEKSITILST 249
Query: 369 PAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMR 428
P + SA ++L + + A+ I E + ++L +N +G L+GK G + ++
Sbjct: 250 P----EGTSAACKSILEIMHKEAQDIKFTEE--IPLKILAHNNFVGRLIGKEGRNLKKIE 303
Query: 429 KLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINR 488
+ + I I ++ E + + G E +A +I ++R + D S+N
Sbjct: 304 QDTDTKITISPLQEL--TLYNPERTITVKGSVETCAKAEEEIMKKIRESYEND-IASMNL 360
Query: 489 PLN 491
N
Sbjct: 361 QAN 363
>gi|426227471|ref|XP_004007841.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
isoform 1 [Ovis aries]
Length = 580
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 115/479 (24%), Positives = 188/479 (39%), Gaps = 127/479 (26%)
Query: 39 SKSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEAS 98
SK P + R+L P + +IGK+G + I++ T I
Sbjct: 189 SKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKI------------------- 229
Query: 99 DNKKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQK 158
+ R EN G E S+ L++ + TS K
Sbjct: 230 ------------DVHRKENAGAAEKSITI-------------------LSTPEGTSAACK 258
Query: 159 ALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDK---- 214
++L + + E D + T+ + L++L + VG L+GK G +K+I++
Sbjct: 259 SILEIMHK--------EAQDIKFTE--EIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDT 308
Query: 215 ------LPTCALASDE-VVQITGEVDTVRKALKLISHQLLDNSPRDHES-------IPG- 259
L L + E + + G V+T KA + I ++ ++ D S IPG
Sbjct: 309 KITISPLQELTLYNPERTITVKGNVETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGL 368
Query: 260 --NPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEIL 317
N G P + G P A M P P+F + E
Sbjct: 369 NLNALGLFPPTSGMPPPTSGPPSA------------MTPPYPQFEQQS---------ETE 407
Query: 318 TFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRI 376
T L VG +IGK G I+ L + G IK+ A + + R+++I+GP
Sbjct: 408 TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPP------ 461
Query: 377 SAPQDAVLRVQTRIARAIPD------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKL 430
+A + Q RI I + E + + V S G ++GKGG + E++ L
Sbjct: 462 ----EAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNL 517
Query: 431 SGAYIRILGKDQIPKCASENEEVVL-INGEFEAVQEA---LFQITTRLRHHFFRDAFPS 485
S A + ++ +DQ P EN++VV+ I G F A Q A + +I T+++ H + A S
Sbjct: 518 SSAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVKQHQQQKALQS 572
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 136/352 (38%), Gaps = 66/352 (18%)
Query: 311 KPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV--MEAVSGTEDRLIVISG 368
K P L RLL + VG +IGK GA IR++ ++T I V E E + ++S
Sbjct: 190 KQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILST 249
Query: 369 PAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMR 428
P + SA ++L + + A+ I E + ++L +N +G L+GK G + ++
Sbjct: 250 P----EGTSAACKSILEIMHKEAQDIKFTEE--IPLKILAHNNFVGRLIGKEGRNLKKIE 303
Query: 429 KLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINR 488
+ + I I ++ E + + G E +A +I ++R + D S+N
Sbjct: 304 QDTDTKITISPLQEL--TLYNPERTITVKGNVETCAKAEEEIMKKIRESYEND-IASMN- 359
Query: 489 PLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFM 548
L + PG+ N + F G PPP S P
Sbjct: 360 -LQAHLI-----------------PGLNLN---ALGLFPPTSGMPPPTSGPPS------- 391
Query: 549 HHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDG 608
M P P + Q E V + +P V I G+ G
Sbjct: 392 ------AMTPPYPQFE---QQSETET----------------VHLFIPALSVGAIIGKQG 426
Query: 609 ACLKQIRQISDAKITITDPK-PGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
+KQ+ + + A I I + P A ++II+G PE AQ I + E
Sbjct: 427 QHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFKAQGRIYGKIKEE 478
>gi|291358560|gb|ADD96765.1| heterogeneous nuclear ribonuclear protein K [Capra hircus]
Length = 441
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 96/417 (23%), Positives = 155/417 (37%), Gaps = 71/417 (17%)
Query: 301 FHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTE 360
E R + + E++ R+L + G VIGKGG I++L+ + + V ++ SG E
Sbjct: 27 MEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDS-SGPE 85
Query: 361 DRLIVISGPAHPDDRI---------------SAPQDAVLRVQTRIARAIPDNREQ----T 401
R++ IS I S + L +++ + +
Sbjct: 86 -RILSISADIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFD 144
Query: 402 VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFE 461
RLL+ + G ++G G+ I E+R+ + I++ + C + VVLI G+ +
Sbjct: 145 CELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQE----CCPQSTDRVVLIGGKPD 200
Query: 462 AVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSPFPSF---IGRRELSPPGMYSN 518
V E + I + + +P +P F D+ + F R P G
Sbjct: 201 RVVECIKIILDLISESPIKGR----AQPYDPNFYDETYDYGGFTMMFDDRRGRPVGFPMR 256
Query: 519 FGPSFHKFD-AVGGPPPPGSFHPHDDHSAF-----------MHHIHRPGMPPHMPD---- 562
F + GG P P S +DD S + R G P D
Sbjct: 257 GRGGFDRMPPGRGGRPMPPSRRDYDDMSPRRGPPPPPRGGDLMAYDRRGRPGDRYDGMVG 316
Query: 563 ----------MKPWGPQGLMEVGGPMGFPDF-------------VGPPHRRVPVVVPRSL 599
+ W P P G + +G P V +P+ L
Sbjct: 317 FSADETWDSAIDTWSPSEWQMAYEPQGGSGYDYSYAGGRGSYGDLGGPIITTQVTIPKDL 376
Query: 600 VPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFV 656
I G+ G +KQIR S A I I +P G+ + +I I+GT +Q AQ L+Q V
Sbjct: 377 AGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSV 433
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 38/63 (60%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
I +V P +IGK G+ + QI ++G +I+++E + GS++R++ I + ++ + +
Sbjct: 366 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNA 425
Query: 106 ENL 108
+ L
Sbjct: 426 QYL 428
>gi|194384644|dbj|BAG59482.1| unnamed protein product [Homo sapiens]
Length = 301
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 89/157 (56%), Gaps = 11/157 (7%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTNAIFKA 71
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I+ ++ ++ + V RL+V ++Q G L+GKGG I E+R+ +GA
Sbjct: 72 FA--MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
+++ G D +P + E + I G +++ E + QI
Sbjct: 130 QVQVAG-DMLP---NSTERAITIAGIPQSIIECVKQI 162
Score = 43.1 bits (100), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 66/130 (50%), Gaps = 21/130 (16%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T +S+ LRL+V ++Q G L+GKGGC IK
Sbjct: 65 TNAIFKAFAMIIDKL---EEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIP 258
+I D LP +++ + I G ++ + +K I +L++ P+ +IP
Sbjct: 122 EIRESTGAQVQVAGDMLPN---STERAITIAGIPQSIIECVKQICVVMLESPPKG-VTIP 177
Query: 259 GNPTGPSHPL 268
P S P+
Sbjct: 178 YRPKPSSSPV 187
>gi|149728835|ref|XP_001494599.1| PREDICTED: poly(rC)-binding protein 4-like isoform 1 [Equus
caballus]
Length = 403
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 150/354 (42%), Gaps = 62/354 (17%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT R+L H + VG +IGK G ++ +++++ I + E +R+ I+G
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITG------ST 69
Query: 377 SAPQDAVLRVQTRIAR---AIPDNREQT----VMTRLLVASNQIGCLLGKGGSIIAEMRK 429
+A AV + ++ A P N V RL++ ++Q G L+GK G+ I E+R+
Sbjct: 70 AAVFHAVSMIAFKLDEDLCAAPTNGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE 129
Query: 430 LSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRP 489
+GA +++ G D +P + E V ++G +A+ + QI + + A P
Sbjct: 130 TTGAQVQVAG-DLLP---NSTERAVTVSGVPDAIILCVRQICAVILESPPKGA----TIP 181
Query: 490 LNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMH 549
+P+ +G LS +S G ++ AV +
Sbjct: 182 YHPSL---------SLGTVLLSANQGFSVQG----QYGAV-----------TSAEVTKLQ 217
Query: 550 HIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGA 609
+ +P P M P ++ G +F +VP L+ + G G+
Sbjct: 218 QLSGHAVPFASPSMVPG-----LDPGAQTSSQEF----------LVPNDLIGCVIGRQGS 262
Query: 610 CLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSETETT 663
+ +IRQ+S A I I + GA E + I+G+P AQ LI A + + T+
Sbjct: 263 KISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYLITACLETAKSTS 316
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 78/358 (21%), Positives = 133/358 (37%), Gaps = 118/358 (32%)
Query: 178 DQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKLPTCALASDE------VVQITGE 231
++E S LR+L+ +VG ++GK G +K+I + + + E + ITG
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGS 68
Query: 232 VDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIH 291
V A+ +I+ +L E + PT
Sbjct: 69 TAAVFHAVSMIAFKL-------DEDLCAAPT----------------------------- 92
Query: 292 LPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIK 351
G + RP +T RL+ + G +IGK G I+ +++ TG ++
Sbjct: 93 -----------NGGSVSRPP-----VTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQ 136
Query: 352 VM-EAVSGTEDRLIVISG--------------------------PAHPDDRI-----SAP 379
V + + + +R + +SG P HP + SA
Sbjct: 137 VAGDLLPNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSAN 196
Query: 380 QD-------------AVLRVQTRIARAIP----------DNREQTVMTRLLVASNQIGCL 416
Q V ++Q A+P D QT LV ++ IGC+
Sbjct: 197 QGFSVQGQYGAVTSAEVTKLQQLSGHAVPFASPSMVPGLDPGAQTSSQEFLVPNDLIGCV 256
Query: 417 LGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRL 474
+G+ GS I+E+R++SGA+I+I + + E V I G ++ A + IT L
Sbjct: 257 IGRQGSKISEIRQMSGAHIKIGNQAE-----GAGERHVTITGSPVSIALAQYLITACL 309
>gi|47213422|emb|CAF94921.1| unnamed protein product [Tetraodon nigroviridis]
Length = 381
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 99/411 (24%), Positives = 144/411 (35%), Gaps = 120/411 (29%)
Query: 303 ESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLK----QETGCDIKVMEAVSG 358
E R + S E++ R+L + G VIGKGG I++L+ Q +G D
Sbjct: 29 EQKSFKRSRNSDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYQQYSGMDF-------- 80
Query: 359 TEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLG 418
D LR LL+ + G ++G
Sbjct: 81 ----------------------DCELR--------------------LLIHQSLAGSIIG 98
Query: 419 KGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHF 478
G+ I E+R+ + I++ + C + VVL+ G+ E V E I T L
Sbjct: 99 VKGAKIKELRENTKTSIKLFQE----CCPQSTDRVVLVGGKMERVVEC---IKTML--EL 149
Query: 479 FRDA-FPSINRPLNPTFLDQVSPFPSFI--------GRREL------------------- 510
DA +P +P F D+ + F GRR +
Sbjct: 150 IVDAPIKGRAQPYDPNFYDETYEYGGFTVMFEERVGGRRPMGGFPSRSSRSSGGDRGFER 209
Query: 511 --SPPGMYSNFGPSFHKFDAV--GGPPPPGSFHPHDDHSAF----MHHIHRPGMPPHMPD 562
S G S +D GPPPP S +S M H HR G +
Sbjct: 210 MSSSRGGRGPMPSSRRDYDDSPRRGPPPPHSSRASRGNSRGRNMPMGHSHRGGDDRYYDS 269
Query: 563 MKPWG--------------------PQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPI 602
+ PQ GG + D +G P V +P+ L
Sbjct: 270 YRSSDDRSKTLVMFKADLLSHFDNTPQLFCASGGRSSYSD-IGGPVVTTQVTIPKDLAGS 328
Query: 603 IQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQ 653
I G+ G +KQIR S A I I +P G+ + +I I+GT +Q AQ L+Q
Sbjct: 329 IIGKGGQRIKQIRHDSGAAIKIDEPLEGSEDRIITITGTQDQIQNAQFLLQ 379
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 37/63 (58%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
+ +V P +IGK G+ + QI D+G I+++E + GS++R++ I + ++ + +
Sbjct: 315 VTTQVTIPKDLAGSIIGKGGQRIKQIRHDSGAAIKIDEPLEGSEDRIITITGTQDQIQNA 374
Query: 106 ENL 108
+ L
Sbjct: 375 QFL 377
>gi|354490191|ref|XP_003507243.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Cricetulus
griseus]
gi|344239259|gb|EGV95362.1| Poly(rC)-binding protein 2 [Cricetulus griseus]
Length = 362
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 89/157 (56%), Gaps = 11/157 (7%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTNAIFKA 71
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I+ ++ ++ + V RL+V ++Q G L+GKGG I E+R+ +GA
Sbjct: 72 FA--MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
+++ G D +P + E + I G +++ E + QI
Sbjct: 130 QVQVAG-DMLP---NSTERAITIAGIPQSIIECVKQI 162
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 117/283 (41%), Gaps = 74/283 (26%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T +S+ LRL+V ++Q G L+GKGGC IK
Sbjct: 65 TNAIFKAFAMIIDKL---EEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPR------ 252
+I D LP +++ + I G ++ + +K I +L++ P+
Sbjct: 122 EIRESTGAQVQVAGDMLPN---STERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPY 178
Query: 253 ----------------------DHESIPG-------NPTGPSHPLPDHSVSSQGAPYATG 283
D S P NP PL +++ Q YA
Sbjct: 179 RPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQ---YAIP 235
Query: 284 HRDVADIH-LPMPPS-IPKFH-ESGVLDRPKPSPEILTF-------------RLLCHDER 327
D+ +H L M S P H +G SPE+ + L ++
Sbjct: 236 QPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDL 295
Query: 328 VGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPA 370
+G +IG+ GA I ++Q +G IK V G+ DR + I+G A
Sbjct: 296 IGCIIGRQGAKINEIRQMSGAQIKTANPVEGSTDRQVTITGSA 338
Score = 45.4 bits (106), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 38/68 (55%)
Query: 593 VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLI 652
+ +P L+ I G GA + +IRQ+S A+I +P G+T+ + I+G+ AQ LI
Sbjct: 289 LTIPNDLIGCIIGRQGAKINEIRQMSGAQIKTANPVEGSTDRQVTITGSAASISLAQYLI 348
Query: 653 QAFVMSET 660
+ SET
Sbjct: 349 NVRLSSET 356
Score = 39.7 bits (91), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 396 DNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVL 455
D QT L + ++ IGC++G+ G+ I E+R++SGA I K P S + +V
Sbjct: 279 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQI----KTANPVEGSTDRQVT- 333
Query: 456 INGEFEAVQEALFQITTRL 474
I G ++ A + I RL
Sbjct: 334 ITGSAASISLAQYLINVRL 352
>gi|322708646|gb|EFZ00223.1| hypothetical protein MAA_04000 [Metarhizium anisopliae ARSEF 23]
Length = 456
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 91/373 (24%), Positives = 152/373 (40%), Gaps = 58/373 (15%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
+ R + +IGKGG + ++++ + V + G +R++ +SG A
Sbjct: 108 IHIRAVISSPEAATIIGKGGENVSNIRKMSNAKCTVSDYQKGAVERILTVSGIAFGLIIR 167
Query: 377 SAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIR 436
+ + + T ++ P RLL+ IG ++GKGG+ I E+++ SGA R
Sbjct: 168 TLNNEPLGEASTASSKTYP--------LRLLIPHILIGSIIGKGGARIREIQEASGA--R 217
Query: 437 ILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLD 496
+ D +SE VV+ G +AV A + + + L P +
Sbjct: 218 LNASDSCLPMSSERSLVVM--GVADAVHIATYYVGSTLLEQLNE----RFGGPAASAYAT 271
Query: 497 QV-SPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPG 555
+ +P S G ++ P YS S H P ++ H D A HH+
Sbjct: 272 RSGAPAGSIPGGMQVVP---YSPQPASGHYGR-------PENYGRHQDRRA--HHMPPAT 319
Query: 556 MPPHMP-DMKPWGPQGLMEVGGPMG-----------FPDFVGP-PH---------RRVP- 592
PPH P + P P M+ GG P VGP PH +P
Sbjct: 320 YPPHYPHNAAPPNPAMPMQYGGQQAAYGGAPHATQHMPPHVGPQPHGGPQGPPMQHGMPG 379
Query: 593 ------VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTH 646
+ +P +V I G+ G + +IRQIS + I I +P+ + E ++ I+GT E
Sbjct: 380 GPLTQQIFIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQDNSNERLVTITGTEECNR 439
Query: 647 AAQSLIQAFVMSE 659
A ++ + + SE
Sbjct: 440 MALYMLYSRLESE 452
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 25/124 (20%)
Query: 254 HESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSI-PKFH--------ES 304
H + P NP P + GAP+AT H MPP + P+ H +
Sbjct: 326 HNAAPPNPAMPMQ-YGGQQAAYGGAPHATQH---------MPPHVGPQPHGGPQGPPMQH 375
Query: 305 GVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLI 364
G+ P LT ++ ++ VG +IGKGG I ++Q +G IK+ E + +RL+
Sbjct: 376 GMPGGP------LTQQIFIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQDNSNERLV 429
Query: 365 VISG 368
I+G
Sbjct: 430 TITG 433
Score = 40.0 bits (92), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 42 FPGG-IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASD 99
PGG + ++ P + +IGK G+ +++I Q +G I++ E S+ERLV I ++
Sbjct: 377 MPGGPLTQQIFIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQDNSNERLVTITGTE 435
>gi|14141166|ref|NP_114366.1| poly(rC)-binding protein 2 isoform b [Homo sapiens]
gi|157041229|ref|NP_001096635.1| poly(rC)-binding protein 2 isoform 1 [Mus musculus]
gi|73996203|ref|XP_534789.2| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Canis lupus
familiaris]
gi|149714829|ref|XP_001504573.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Equus caballus]
gi|297692024|ref|XP_002823365.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Pongo abelii]
gi|301775803|ref|XP_002923308.1| PREDICTED: poly(rC)-binding protein 2-like [Ailuropoda melanoleuca]
gi|332206039|ref|XP_003252097.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Nomascus
leucogenys]
gi|332839234|ref|XP_003313706.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Pan troglodytes]
gi|395541533|ref|XP_003772697.1| PREDICTED: poly(rC)-binding protein 2 [Sarcophilus harrisii]
gi|403296804|ref|XP_003939285.1| PREDICTED: poly(rC)-binding protein 2 [Saimiri boliviensis
boliviensis]
gi|410964553|ref|XP_003988818.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Felis catus]
gi|426224368|ref|XP_004006343.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Ovis aries]
gi|426372753|ref|XP_004053282.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Gorilla gorilla
gorilla]
gi|2500577|sp|Q61990.1|PCBP2_MOUSE RecName: Full=Poly(rC)-binding protein 2; AltName: Full=Alpha-CP2;
AltName: Full=CTBP; Short=CBP; AltName: Full=Putative
heterogeneous nuclear ribonucleoprotein X; Short=hnRNP X
gi|436894|gb|AAA03705.1| nucleic acid binding protein [Mus musculus]
gi|12654635|gb|AAH01155.1| Poly(rC) binding protein 2 [Homo sapiens]
gi|13172240|gb|AAK14059.1| alpha-CP2 [Mus musculus]
gi|50925529|gb|AAH78909.1| Pcbp2 protein [Rattus norvegicus]
gi|119617113|gb|EAW96707.1| poly(rC) binding protein 2, isoform CRA_b [Homo sapiens]
gi|148672029|gb|EDL03976.1| poly(rC) binding protein 2, isoform CRA_c [Mus musculus]
gi|149031920|gb|EDL86832.1| rCG50739, isoform CRA_a [Rattus norvegicus]
gi|158257714|dbj|BAF84830.1| unnamed protein product [Homo sapiens]
Length = 362
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 89/157 (56%), Gaps = 11/157 (7%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTNAIFKA 71
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I+ ++ ++ + V RL+V ++Q G L+GKGG I E+R+ +GA
Sbjct: 72 FA--MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
+++ G D +P + E + I G +++ E + QI
Sbjct: 130 QVQVAG-DMLP---NSTERAITIAGIPQSIIECVKQI 162
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 118/283 (41%), Gaps = 74/283 (26%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T +S+ LRL+V ++Q G L+GKGGC IK
Sbjct: 65 TNAIFKAFAMIIDKL---EEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPR------ 252
+I D LP +++ + I G ++ + +K I +L++ P+
Sbjct: 122 EIRESTGAQVQVAGDMLPN---STERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPY 178
Query: 253 ----------------------DHESIPG-------NPTGPSHPLPDHSVSSQGAPYATG 283
D S P NP PL +++ Q YA
Sbjct: 179 RPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQ---YAIP 235
Query: 284 HRDVADIH-LPMPPS-IPKFH-ESGVLDRPKPSPEILTF-------------RLLCHDER 327
D+ +H L M S P H +G SPE+ + L ++
Sbjct: 236 QPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDL 295
Query: 328 VGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPA 370
+G +IG+ GA I ++Q +G IK+ V G+ DR + I+G A
Sbjct: 296 IGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSA 338
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%)
Query: 593 VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLI 652
+ +P L+ I G GA + +IRQ+S A+I I +P G+T+ + I+G+ AQ LI
Sbjct: 289 LTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLI 348
Query: 653 QAFVMSET 660
+ SET
Sbjct: 349 NVRLSSET 356
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 396 DNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVL 455
D QT L + ++ IGC++G+ G+ I E+R++SGA I+I P S + +V
Sbjct: 279 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN----PVEGSTDRQVT- 333
Query: 456 INGEFEAVQEALFQITTRL 474
I G ++ A + I RL
Sbjct: 334 ITGSAASISLAQYLINVRL 352
>gi|58259741|ref|XP_567283.1| cytoplasm protein [Cryptococcus neoformans var. neoformans JEC21]
gi|134116752|ref|XP_773048.1| hypothetical protein CNBJ3240 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255668|gb|EAL18401.1| hypothetical protein CNBJ3240 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229333|gb|AAW45766.1| cytoplasm protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 357
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 95/185 (51%), Gaps = 24/185 (12%)
Query: 309 RPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
+P P P+ ++ R L + +IG+GGA + +++++ + V E++ G +R++ +SG
Sbjct: 72 KPDPGPQQISMRSLIVTQDASIIIGRGGAHVNEIREKSSARVTVSESIPGNPERILNVSG 131
Query: 369 PAHPDDRISAPQDAVLRVQTRIARAIPDN--------REQTVMTRLLVASNQIGCLLGKG 420
P DAV + I R I D + V + ++ ++++G ++GKG
Sbjct: 132 PL----------DAVAKAFGLIVRRINDEPFDVPSVPGSRAVTIKFIIPNSRMGSVIGKG 181
Query: 421 GSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFR 480
GS I E+++ SGA + + +P E V+ ++G +AV A++ I T L ++
Sbjct: 182 GSKIKEIQEASGARLN-ASEAMLP---GSTERVLSVSGVADAVHIAVYYIGTILLE--YQ 235
Query: 481 DAFPS 485
D +PS
Sbjct: 236 DRYPS 240
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 63/319 (19%), Positives = 126/319 (39%), Gaps = 85/319 (26%)
Query: 186 KFVLRLLVLSTQVGCLLGKGGCVIKQIDKLPTCALASDE--------VVQITGEVDTVRK 237
+ +R L+++ ++G+GG + +I + + + E ++ ++G +D V K
Sbjct: 79 QISMRSLIVTQDASIIIGRGGAHVNEIREKSSARVTVSESIPGNPERILNVSGPLDAVAK 138
Query: 238 ALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPS 297
A LI + +++ P D P G R V
Sbjct: 139 AFGLIVRR-INDEPFD------------------------VPSVPGSRAV---------- 163
Query: 298 IPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA-V 356
T + + + R+G VIGKGG+ I+ +++ +G + EA +
Sbjct: 164 --------------------TIKFIIPNSRMGSVIGKGGSKIKEIQEASGARLNASEAML 203
Query: 357 SGTEDRLIVISGPA----------------HPDDRISAPQDAVLRVQTRIARAIPDNREQ 400
G+ +R++ +SG A + D S + + Q+R +
Sbjct: 204 PGSTERVLSVSGVADAVHIAVYYIGTILLEYQDRYPSNATGSYKQSQSRGPPPNSNAPPP 263
Query: 401 TVMT--RLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILG-KDQIPKCASEN--EEVVL 455
M ++ + + +G ++G+GGS I E+R S IR+ +P A+ N E +V
Sbjct: 264 PGMQTQQIFIPNALVGAIIGRGGSKINEIRSQSSCQIRVTDPGTTVPGGAAANPEERLVT 323
Query: 456 INGEFEAVQEALFQITTRL 474
I G + + A+ + +R+
Sbjct: 324 ITGYPDNINAAVALLYSRV 342
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 109/269 (40%), Gaps = 60/269 (22%)
Query: 147 LNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSKFV-LRLLVLSTQVGCLLGKG 205
LN V KA L+ R+ + E D + S+ V ++ ++ ++++G ++GKG
Sbjct: 127 LNVSGPLDAVAKAFGLIVRRIND-----EPFDVPSVPGSRAVTIKFIIPNSRMGSVIGKG 181
Query: 206 GCVIKQIDKLPTCALASDE---------VVQITGEVDTVRKALKLISHQLLDNSPRDHES 256
G IK+I + L + E V+ ++G D V A+ I LL+ R
Sbjct: 182 GSKIKEIQEASGARLNASEAMLPGSTERVLSVSGVADAVHIAVYYIGTILLEYQDR---- 237
Query: 257 IPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEI 316
P N TG S+G P + +
Sbjct: 238 YPSNATGSY-----KQSQSRGPPPNSNAPPPPGMQ------------------------- 267
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVME--------AVSGTEDRLIVISG 368
T ++ + VG +IG+GG+ I ++ ++ C I+V + A + E+RL+ I+G
Sbjct: 268 -TQQIFIPNALVGAIIGRGGSKINEIRSQSSCQIRVTDPGTTVPGGAAANPEERLVTITG 326
Query: 369 PAHPDDRISAPQDAVLRVQTRIARAIPDN 397
+PD+ +A RV+ A+ + N
Sbjct: 327 --YPDNINAAVALLYSRVEAERAKLVEQN 353
Score = 39.3 bits (90), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 8/75 (10%)
Query: 593 VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPK---PGAT-----ETVIIISGTPEQ 644
+ +P +LV I G G+ + +IR S +I +TDP PG E ++ I+G P+
Sbjct: 271 IFIPNALVGAIIGRGGSKINEIRSQSSCQIRVTDPGTTVPGGAAANPEERLVTITGYPDN 330
Query: 645 THAAQSLIQAFVMSE 659
+AA +L+ + V +E
Sbjct: 331 INAAVALLYSRVEAE 345
>gi|388582172|gb|EIM22478.1| eukaryotic type KH-domain (KH-domain type I) [Wallemia sebi CBS
633.66]
Length = 319
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 145/362 (40%), Gaps = 85/362 (23%)
Query: 315 EILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDD 374
+ LT R L + G +IGKGG + L++ TG V + ++G +R++ I+G
Sbjct: 19 DTLTLRALVSTKEAGIIIGKGGKNVADLRERTGVKAGVSKVIAGVHERVLSITGST---- 74
Query: 375 RISAPQDAVLRVQTRIARAIPDN------------REQTVMTRLLVASNQIGCLLGKGGS 422
SA DA + IA+ I DN T RLL++ N +G ++G+ G
Sbjct: 75 --SAIADAF----SIIAQTILDNPLNPSTAPLQSPPSATTAIRLLISHNLMGTVIGRQGI 128
Query: 423 IIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDA 482
I +++ SG + + K+ +P+ E +V + G E++ A+ I L + R +
Sbjct: 129 KIKQIQDTSGVRM-VASKELLPQST---ERIVEVQGTVESIHIAINDIAKCLLEDWDRYS 184
Query: 483 FPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHK--FDAVGGPPPPGSFHP 540
+ P +PP +S F SF+ ++ P +F+
Sbjct: 185 GTILYTP---------------------APPNEHSLFNSSFNNSSIRSINSVRRPDNFNM 223
Query: 541 HDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLV 600
+SA PQ P V H + +P +V
Sbjct: 224 QSLNSAL--------------------PQ-----------PRDVRTQH----ISIPSDMV 248
Query: 601 PIIQGEDGACLKQIRQISDAKITIT-DPKPGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
I G G+ + +IR++S AKI I P E + I GTPE A L+ + + +E
Sbjct: 249 GPIIGRAGSRISEIRRLSTAKIIIAKQPHDETGERLFTIIGTPEANEKALILLYSQLENE 308
Query: 660 TE 661
E
Sbjct: 309 KE 310
Score = 45.8 bits (107), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 140/333 (42%), Gaps = 55/333 (16%)
Query: 172 PETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKLP--------TCALASD 223
P+ + AD+ +T LR LV + + G ++GKGG + + + A +
Sbjct: 10 PQQQNADEIDT----LTLRALVSTKEAGIIIGKGGKNVADLRERTGVKAGVSKVIAGVHE 65
Query: 224 EVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATG 283
V+ ITG + A +I+ +LDN P NP+ + PL ++
Sbjct: 66 RVLSITGSTSAIADAFSIIAQTILDN--------PLNPS--TAPLQSPPSATTAIRLLIS 115
Query: 284 HRDVADIHLPMPPSIPKFHE-SGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSL 342
H + + I + + SGV R S E+L ER+ V G +I ++
Sbjct: 116 HNLMGTVIGRQGIKIKQIQDTSGV--RMVASKELLP----QSTERIVEVQGTVESIHIAI 169
Query: 343 KQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI---SAPQDAVLRVQTRIARAIPDNRE 399
C ++ + SGT ++ PA P++ S+ ++ +R + R PDN
Sbjct: 170 NDIAKCLLEDWDRYSGT-----ILYTPAPPNEHSLFNSSFNNSSIRSINSVRR--PDNFN 222
Query: 400 QTVMTRLL------------VASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCA 447
+ L + S+ +G ++G+ GS I+E+R+LS A I I+ K +
Sbjct: 223 MQSLNSALPQPRDVRTQHISIPSDMVGPIIGRAGSRISEIRRLSTAKI-IIAKQPHDETG 281
Query: 448 SENEEVVLINGEFEAVQEALFQITTRLRHHFFR 480
E + I G EA ++AL + ++L + R
Sbjct: 282 ---ERLFTIIGTPEANEKALILLYSQLENEKER 311
>gi|126345443|ref|XP_001362482.1| PREDICTED: poly(rC)-binding protein 2-like isoform 1 [Monodelphis
domestica]
gi|351706147|gb|EHB09066.1| Poly(rC)-binding protein 2 [Heterocephalus glaber]
gi|440900676|gb|ELR51755.1| Poly(rC)-binding protein 2, partial [Bos grunniens mutus]
Length = 351
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 89/157 (56%), Gaps = 11/157 (7%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTNAIFKA 71
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I+ ++ ++ + V RL+V ++Q G L+GKGG I E+R+ +GA
Sbjct: 72 FA--MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
+++ G D +P + E + I G +++ E + QI
Sbjct: 130 QVQVAG-DMLP---NSTERAITIAGIPQSIIECVKQI 162
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 118/283 (41%), Gaps = 74/283 (26%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T +S+ LRL+V ++Q G L+GKGGC IK
Sbjct: 65 TNAIFKAFAMIIDKL---EEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPR------ 252
+I D LP +++ + I G ++ + +K I +L++ P+
Sbjct: 122 EIRESTGAQVQVAGDMLPN---STERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPY 178
Query: 253 ----------------------DHESIPG-------NPTGPSHPLPDHSVSSQGAPYATG 283
D S P NP PL +++ Q YA
Sbjct: 179 RPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQ---YAIP 235
Query: 284 HRDVADIH-LPMPPS-IPKFH-ESGVLDRPKPSPEILTF-------------RLLCHDER 327
D+ +H L M S P H +G SPE+ + L ++
Sbjct: 236 QPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDL 295
Query: 328 VGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPA 370
+G +IG+ GA I ++Q +G IK+ V G+ DR + I+G A
Sbjct: 296 IGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSA 338
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%)
Query: 593 VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLI 652
+ +P L+ I G GA + +IRQ+S A+I I +P G+T+ + I+G+ AQ LI
Sbjct: 289 LTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLI 348
Score = 39.7 bits (91), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 396 DNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVL 455
D QT L + ++ IGC++G+ G+ I E+R++SGA I+I P S + +V
Sbjct: 279 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN----PVEGSTDRQVT- 333
Query: 456 INGEFEAVQEALFQITTR 473
I G ++ A + I R
Sbjct: 334 ITGSAASISLAQYLINVR 351
>gi|354490195|ref|XP_003507245.1| PREDICTED: poly(rC)-binding protein 2 isoform 3 [Cricetulus
griseus]
Length = 349
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 89/157 (56%), Gaps = 11/157 (7%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTNAIFKA 71
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I+ ++ ++ + V RL+V ++Q G L+GKGG I E+R+ +GA
Sbjct: 72 FA--MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
+++ G D +P + E + I G +++ E + QI
Sbjct: 130 QVQVAG-DMLP---NSTERAITIAGIPQSIIECVKQI 162
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 115/270 (42%), Gaps = 61/270 (22%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T +S+ LRL+V ++Q G L+GKGGC IK
Sbjct: 65 TNAIFKAFAMIIDKL---EEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPR------ 252
+I D LP +++ + I G ++ + +K I +L++ P+
Sbjct: 122 EIRESTGAQVQVAGDMLPN---STERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPY 178
Query: 253 ----------------------DHESIPG-------NPTGPSHPLPDHSVSSQGAPYATG 283
D S P NP PL +++ Q YA
Sbjct: 179 RPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQ---YAIP 235
Query: 284 HRDVADIH-LPMPPS-IPKFH-ESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIR 340
D+ +H L M S P H +G S + + L ++ +G +IG+ GA I
Sbjct: 236 QPDLTKLHQLAMQQSHFPMTHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKIN 295
Query: 341 SLKQETGCDIKVMEAVSGTEDRLIVISGPA 370
++Q +G IK V G+ DR + I+G A
Sbjct: 296 EIRQMSGAQIKTANPVEGSTDRQVTITGSA 325
Score = 45.4 bits (106), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 38/68 (55%)
Query: 593 VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLI 652
+ +P L+ I G GA + +IRQ+S A+I +P G+T+ + I+G+ AQ LI
Sbjct: 276 LTIPNDLIGCIIGRQGAKINEIRQMSGAQIKTANPVEGSTDRQVTITGSAASISLAQYLI 335
Query: 653 QAFVMSET 660
+ SET
Sbjct: 336 NVRLSSET 343
Score = 39.7 bits (91), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 396 DNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVL 455
D QT L + ++ IGC++G+ G+ I E+R++SGA I K P S + +V
Sbjct: 266 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQI----KTANPVEGSTDRQVT- 320
Query: 456 INGEFEAVQEALFQITTRL 474
I G ++ A + I RL
Sbjct: 321 ITGSAASISLAQYLINVRL 339
>gi|1360003|emb|CAA66619.1| nuclear poly(C)-binding protein, splicevariant E [Mus musculus]
Length = 349
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 89/157 (56%), Gaps = 11/157 (7%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTNAIFKA 71
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I+ ++ ++ + V RL+V ++Q G L+GKGG I E+R+ +GA
Sbjct: 72 FA--MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
+++ G D +P + E + I G +++ E + QI
Sbjct: 130 QVQVAG-DMLP---NSTERAITIAGIPQSIIECVKQI 162
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 115/270 (42%), Gaps = 61/270 (22%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T +S+ LRL+V ++Q G L+GKGGC IK
Sbjct: 65 TNAIFKAFAMIIDKL---EEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPR------ 252
+I D LP +++ + I G ++ + +K I +L++ P+
Sbjct: 122 EIRESTGAQVQVAGDMLPN---STERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPY 178
Query: 253 ----------------------DHESIPG-------NPTGPSHPLPDHSVSSQGAPYATG 283
D S P NP PL +++ Q YA
Sbjct: 179 RPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMSLNPDLEGPPLEAYTIQGQ---YAIP 235
Query: 284 HRDVADIH-LPMPPS-IPKFH-ESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIR 340
D+ +H L M S P H +G S + + L ++ +G +I + GA I
Sbjct: 236 QPDLTKLHQLAMQQSHFPMTHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIRRQGAKIN 295
Query: 341 SLKQETGCDIKVMEAVSGTEDRLIVISGPA 370
++Q +G IK+ V G+ DR + I+G A
Sbjct: 296 EIRQMSGAQIKIANPVEGSTDRQVTITGSA 325
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 38/68 (55%)
Query: 593 VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLI 652
+ +P L+ I GA + +IRQ+S A+I I +P G+T+ + I+G+ AQ LI
Sbjct: 276 LTIPNDLIGCIIRRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLI 335
Query: 653 QAFVMSET 660
+ SET
Sbjct: 336 NVRLSSET 343
>gi|417409319|gb|JAA51170.1| Putative polyc-binding alphacp-1, partial [Desmodus rotundus]
Length = 283
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 87/157 (55%), Gaps = 11/157 (7%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 23 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTNAIFKA 80
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I ++ ++ + V RL+V + Q G L+GKGG I E+R+ +GA
Sbjct: 81 FA--MIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGA 138
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
+++ G D +P + E + I G ++V E + QI
Sbjct: 139 QVQVAG-DMLP---NSTERAITIAGVPQSVTECVKQI 171
Score = 47.0 bits (110), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 73/153 (47%), Gaps = 29/153 (18%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T +S+ LRL+V +TQ G L+GKGGC IK
Sbjct: 74 TNAIFKAFAMIIDKL---EEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIK 130
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALK---LISHQLLDNSPRDH- 254
+I D LP +++ + I G +V + +K L+ + L SP+
Sbjct: 131 EIRESTGAQVQVAGDMLPN---STERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRV 187
Query: 255 ESIPGNPTGPSHPL-----PDHSVSSQGAPYAT 282
+IP P S P+ D + G P+AT
Sbjct: 188 MTIPYQPMPASSPVICAGGQDRCSDAAGYPHAT 220
>gi|126345445|ref|XP_001362564.1| PREDICTED: poly(rC)-binding protein 2-like isoform 2 [Monodelphis
domestica]
Length = 338
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 89/157 (56%), Gaps = 11/157 (7%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTNAIFKA 71
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I+ ++ ++ + V RL+V ++Q G L+GKGG I E+R+ +GA
Sbjct: 72 FA--MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
+++ G D +P + E + I G +++ E + QI
Sbjct: 130 QVQVAG-DMLP---NSTERAITIAGIPQSIIECVKQI 162
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 116/270 (42%), Gaps = 61/270 (22%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T +S+ LRL+V ++Q G L+GKGGC IK
Sbjct: 65 TNAIFKAFAMIIDKL---EEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPR------ 252
+I D LP +++ + I G ++ + +K I +L++ P+
Sbjct: 122 EIRESTGAQVQVAGDMLPN---STERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPY 178
Query: 253 ----------------------DHESIPG-------NPTGPSHPLPDHSVSSQGAPYATG 283
D S P NP PL +++ Q YA
Sbjct: 179 RPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQ---YAIP 235
Query: 284 HRDVADIH-LPMPPS-IPKFH-ESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIR 340
D+ +H L M S P H +G S + + L ++ +G +IG+ GA I
Sbjct: 236 QPDLTKLHQLAMQQSHFPMTHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKIN 295
Query: 341 SLKQETGCDIKVMEAVSGTEDRLIVISGPA 370
++Q +G IK+ V G+ DR + I+G A
Sbjct: 296 EIRQMSGAQIKIANPVEGSTDRQVTITGSA 325
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%)
Query: 593 VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLI 652
+ +P L+ I G GA + +IRQ+S A+I I +P G+T+ + I+G+ AQ LI
Sbjct: 276 LTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLI 335
Score = 39.7 bits (91), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 396 DNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVL 455
D QT L + ++ IGC++G+ G+ I E+R++SGA I+I P S + +V
Sbjct: 266 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN----PVEGSTDRQVT- 320
Query: 456 INGEFEAVQEALFQITTR 473
I G ++ A + I R
Sbjct: 321 ITGSAASISLAQYLINVR 338
>gi|77736367|ref|NP_001029883.1| poly(rC)-binding protein 2 [Bos taurus]
gi|157057549|ref|NP_035172.2| poly(rC)-binding protein 2 isoform 2 [Mus musculus]
gi|291389257|ref|XP_002711065.1| PREDICTED: poly(rC) binding protein 2-like isoform 2 [Oryctolagus
cuniculus]
gi|348581077|ref|XP_003476304.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Cavia porcellus]
gi|426224370|ref|XP_004006344.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Ovis aries]
gi|74268197|gb|AAI03398.1| Poly(rC) binding protein 2 [Bos taurus]
gi|119617114|gb|EAW96708.1| poly(rC) binding protein 2, isoform CRA_c [Homo sapiens]
gi|148672028|gb|EDL03975.1| poly(rC) binding protein 2, isoform CRA_b [Mus musculus]
gi|149031923|gb|EDL86835.1| rCG50739, isoform CRA_d [Rattus norvegicus]
gi|296487920|tpg|DAA30033.1| TPA: poly(rC) binding protein 2 [Bos taurus]
Length = 349
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 89/157 (56%), Gaps = 11/157 (7%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTNAIFKA 71
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I+ ++ ++ + V RL+V ++Q G L+GKGG I E+R+ +GA
Sbjct: 72 FA--MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
+++ G D +P + E + I G +++ E + QI
Sbjct: 130 QVQVAG-DMLP---NSTERAITIAGIPQSIIECVKQI 162
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 116/270 (42%), Gaps = 61/270 (22%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T +S+ LRL+V ++Q G L+GKGGC IK
Sbjct: 65 TNAIFKAFAMIIDKL---EEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPR------ 252
+I D LP +++ + I G ++ + +K I +L++ P+
Sbjct: 122 EIRESTGAQVQVAGDMLPN---STERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPY 178
Query: 253 ----------------------DHESIPG-------NPTGPSHPLPDHSVSSQGAPYATG 283
D S P NP PL +++ Q YA
Sbjct: 179 RPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQ---YAIP 235
Query: 284 HRDVADIH-LPMPPS-IPKFH-ESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIR 340
D+ +H L M S P H +G S + + L ++ +G +IG+ GA I
Sbjct: 236 QPDLTKLHQLAMQQSHFPMTHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKIN 295
Query: 341 SLKQETGCDIKVMEAVSGTEDRLIVISGPA 370
++Q +G IK+ V G+ DR + I+G A
Sbjct: 296 EIRQMSGAQIKIANPVEGSTDRQVTITGSA 325
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%)
Query: 593 VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLI 652
+ +P L+ I G GA + +IRQ+S A+I I +P G+T+ + I+G+ AQ LI
Sbjct: 276 LTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLI 335
Query: 653 QAFVMSET 660
+ SET
Sbjct: 336 NVRLSSET 343
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 396 DNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVL 455
D QT L + ++ IGC++G+ G+ I E+R++SGA I+I P S + +V
Sbjct: 266 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN----PVEGSTDRQVT- 320
Query: 456 INGEFEAVQEALFQITTRL 474
I G ++ A + I RL
Sbjct: 321 ITGSAASISLAQYLINVRL 339
>gi|380792097|gb|AFE67924.1| poly(rC)-binding protein 2 isoform f, partial [Macaca mulatta]
Length = 197
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 94/179 (52%), Gaps = 11/179 (6%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTNAIFKA 71
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I+ ++ ++ + V RL+V ++Q G L+GKGG I E+R+ +GA
Sbjct: 72 FA--MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNP 492
+++ G D +P + E + I G +++ E + QI + + + P P
Sbjct: 130 QVQVAG-DMLP---NSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRP 184
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 60/130 (46%), Gaps = 17/130 (13%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T +S+ LRL+V ++Q G L+GKGGC IK
Sbjct: 65 TNAIFKAFAMIIDKL---EEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIP 258
+I D LP + + I + K + ++ + L SP +IP
Sbjct: 122 EIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIP 181
Query: 259 GNPTGPSHPL 268
P S P+
Sbjct: 182 YRPKPSSSPV 191
>gi|332864859|ref|XP_001157309.2| PREDICTED: insulin-like growth factor 2 mRNA binding protein 3
isoform 1 [Pan troglodytes]
Length = 440
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 154/363 (42%), Gaps = 76/363 (20%)
Query: 163 VFERMVEVEPETEVADQENTKSSK--------FVLRLLVLSTQVGCLLGKGGCVIKQIDK 214
V E +V ++E A T SSK L++L + VG L+GK G +K+I++
Sbjct: 106 VVESCEQVNTDSETAVVNVTYSSKDQARHTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQ 165
Query: 215 ----------LPTCALASDE-VVQITGEVDTVRKALKLISHQLLDNSPRDHES------- 256
L L + E + + G V+T KA + I ++ ++ D S
Sbjct: 166 DTDTKITISPLQELTLYNPERTITVKGNVETCAKAEEEIMKKIRESYENDIASMNLQAHL 225
Query: 257 IPG---NPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPS 313
IPG N G P + G P A M P P+F +S
Sbjct: 226 IPGLNLNALGLFPPTSGMPPPTSGPPSA------------MTPPYPQFEQS--------- 264
Query: 314 PEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHP 372
E T L VG +IGK G I+ L + G IK+ A + + R+++I+GP
Sbjct: 265 -ETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPP-- 321
Query: 373 DDRISAPQDAVLRVQTRIARAIPD------NREQTVMTRLLVASNQIGCLLGKGGSIIAE 426
+A + Q RI I + E + + V S G ++GKGG + E
Sbjct: 322 --------EAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNE 373
Query: 427 MRKLSGAYIRILGKDQIPKCASENEEVVL-INGEFEAVQEA---LFQITTRLRHHFFRDA 482
++ LS A + ++ +DQ P EN++VV+ I G F A Q A + +I T+++ H + A
Sbjct: 374 LQNLSSAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVKQHQQQKA 429
Query: 483 FPS 485
S
Sbjct: 430 LQS 432
>gi|2105469|gb|AAC35208.1| putative RNA binding protein KOC [Homo sapiens]
gi|4098297|gb|AAD09223.1| Koc1 [Homo sapiens]
Length = 579
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 116/479 (24%), Positives = 188/479 (39%), Gaps = 128/479 (26%)
Query: 39 SKSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEAS 98
SK P + R+L P + +IGK+G + I++ T I V
Sbjct: 189 SKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVH---------------- 232
Query: 99 DNKKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQK 158
R EN G E S+ L++ + TS K
Sbjct: 233 ---------------RKENAGAAEKSITI-------------------LSTPEGTSAACK 258
Query: 159 ALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDK---- 214
++L + + E D + T+ + L++L + VG L+GK G +K+I++
Sbjct: 259 SILEIMHK--------EAQDIKFTE--EIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDT 308
Query: 215 ------LPTCALASDE-VVQITGEVDTVRKALKLISHQLLDNSPRDHES-------IPG- 259
L L + E + + G V+T KA + I ++ ++ D S IPG
Sbjct: 309 KITISPLQELTLYNPERTITVKGNVETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGL 368
Query: 260 --NPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEIL 317
N G P + G P A M P P+F +S E
Sbjct: 369 NLNALGLFPPTSGMPPPTSGPPSA------------MTPPYPQFEQS----------ETE 406
Query: 318 TFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRI 376
T VG +IGK G I+ L + G IK+ A + + R+++I+GP
Sbjct: 407 TVHQFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPP------ 460
Query: 377 SAPQDAVLRVQTRIARAIPD------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKL 430
+A + Q RI I + E + + V S G ++GKGG + E++ L
Sbjct: 461 ----EAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNL 516
Query: 431 SGAYIRILGKDQIPKCASENEEVVL-INGEFEAVQEA---LFQITTRLRHHFFRDAFPS 485
S A + ++ +DQ P EN++VV+ I G F A Q A + +I T+++ H + A S
Sbjct: 517 SSAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVKQHQQQKALQS 571
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 136/353 (38%), Gaps = 67/353 (18%)
Query: 311 KPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV--MEAVSGTEDRLIVISG 368
K P L RLL + VG +IGK GA IR++ ++T I V E E + ++S
Sbjct: 190 KQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILST 249
Query: 369 PAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMR 428
P + SA ++L + + A+ I E + ++L +N +G L+GK G + ++
Sbjct: 250 P----EGTSAACKSILEIMHKEAQDIKFTEE--IPLKILAHNNFVGRLIGKEGRNLKKIE 303
Query: 429 KLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINR 488
+ + I I ++ E + + G E +A +I ++R + D S+N
Sbjct: 304 QDTDTKITISPLQEL--TLYNPERTITVKGNVETCAKAEEEIMKKIRESYEND-IASMN- 359
Query: 489 PLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFM 548
L + PG+ N + F G PPP S P SA
Sbjct: 360 -LQAHLI-----------------PGLNLN---ALGLFPPTSGMPPPTSGPP----SAM- 393
Query: 549 HHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDG 608
PP +P F V +P V I G+ G
Sbjct: 394 -------TPP---------------------YPQFEQSETETVHQFIPALSVGAIIGKQG 425
Query: 609 ACLKQIRQISDAKITITDPK-PGATETVIIISGTPEQTHAAQSLIQAFVMSET 660
+KQ+ + + A I I + P A ++II+G PE AQ I + E
Sbjct: 426 QHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFKAQGRIYGKIKEEN 478
>gi|260829253|ref|XP_002609576.1| hypothetical protein BRAFLDRAFT_87781 [Branchiostoma floridae]
gi|229294938|gb|EEN65586.1| hypothetical protein BRAFLDRAFT_87781 [Branchiostoma floridae]
Length = 408
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 89/172 (51%), Gaps = 27/172 (15%)
Query: 310 PKPSPEI-LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
P +P + LT RL+ + VG +IGK G I+ ++E+G I + + S +R++ I+G
Sbjct: 12 PGEAPSVTLTIRLIMQGKDVGSIIGKKGDTIKRFREESGARINISDGSS--PERIVTITG 69
Query: 369 PAHPDDRISAPQDAVLRVQTRIARAIPDNREQT----------VMTRLLVASNQIGCLLG 418
+ +L+ I + ++ + V RL+V ++Q G L+G
Sbjct: 70 ST----------ENILKAFNMIGKKFEEDMKAAHVNSSVPVPPVTLRLIVPASQCGSLIG 119
Query: 419 KGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
KGGS I E+R+++GA I++ G D +P + E V ++G +A+ + ++ I
Sbjct: 120 KGGSKIKEIREVTGASIQVAG-DMLP---NSTERAVTVSGTPDAISQCVYHI 167
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 91/203 (44%), Gaps = 29/203 (14%)
Query: 187 FVLRLLVLSTQVGCLLGKGGCVIKQIDKLPTCAL---------ASDEVVQITGEVDTVRK 237
LRL+V ++Q G L+GKGG IK+I ++ ++ +++ V ++G D + +
Sbjct: 103 VTLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVAGDMLPNSTERAVTVSGTPDAISQ 162
Query: 238 ALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIH---LPM 294
+ I +L++ P+ T P P P S+ G P + +H L
Sbjct: 163 CVYHICCVMLESPPKGA-------TIPYKPRPASGTSTSG-PVVFAGGQLTKLHQLALQQ 214
Query: 295 PPSI--------PKFHESGVLDRPKP-SPEILTFRLLCHDERVGGVIGKGGAIIRSLKQE 345
P I + GV +P +P T L +E +G +IGKGG I ++Q
Sbjct: 215 TPYITPGTTLPAALATQFGVQTASQPGNPSSQTHELTIPNELIGCIIGKGGCKINEIRQC 274
Query: 346 TGCDIKVMEAVSGTEDRLIVISG 368
+G IK+ G+ DR + I+G
Sbjct: 275 SGATIKIAGMQEGSTDRQVTITG 297
Score = 45.4 bits (106), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Query: 406 LLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQE 465
L + + IGC++GKGG I E+R+ SGA I+I G + + V I G E++
Sbjct: 250 LTIPNELIGCIIGKGGCKINEIRQCSGATIKIAGMQE-----GSTDRQVTITGTPESISM 304
Query: 466 ALFQITTRL 474
A F I T L
Sbjct: 305 AQFLINTSL 313
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%)
Query: 593 VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLI 652
+ +P L+ I G+ G + +IRQ S A I I + G+T+ + I+GTPE AQ LI
Sbjct: 250 LTIPNELIGCIIGKGGCKINEIRQCSGATIKIAGMQEGSTDRQVTITGTPESISMAQFLI 309
Query: 653 Q 653
Sbjct: 310 N 310
>gi|344266063|ref|XP_003405100.1| PREDICTED: poly(rC)-binding protein 2-like isoform 1 [Loxodonta
africana]
Length = 360
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 89/157 (56%), Gaps = 11/157 (7%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTNAIFKA 71
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I+ ++ ++ + V RL+V ++Q G L+GKGG I E+R+ +GA
Sbjct: 72 FA--MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
+++ G D +P + E + I G +++ E + QI
Sbjct: 130 QVQVAG-DMLP---NSTERAITIAGIPQSIIECVKQI 162
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 118/281 (41%), Gaps = 72/281 (25%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T +S+ LRL+V ++Q G L+GKGGC IK
Sbjct: 65 TNAIFKAFAMIIDKL---EEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPR------ 252
+I D LP +++ + I G ++ + +K I +L+ SP+
Sbjct: 122 EIRESTGAQVQVAGDMLPN---STERAITIAGIPQSIIECVKQICVVMLEVSPQAPPKLQ 178
Query: 253 --------------------DHESIPG-------NPTGPSHPLPDHSVSSQGAPYATGHR 285
D S P NP PL +++ Q YA
Sbjct: 179 CIPWRLKSSIYPQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQ---YAIPQP 235
Query: 286 DVADIH-LPMPPS-IPKFH-ESGVLDRPKPSPEILTF-------------RLLCHDERVG 329
D+ +H L M S P H +G SPE+ + L ++ +G
Sbjct: 236 DLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIG 295
Query: 330 GVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPA 370
+IG+ GA I ++Q +G IK+ V G+ DR + I+G A
Sbjct: 296 CIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSA 336
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%)
Query: 593 VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLI 652
+ +P L+ I G GA + +IRQ+S A+I I +P G+T+ + I+G+ AQ LI
Sbjct: 287 LTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLI 346
Query: 653 QAFVMSET 660
+ SET
Sbjct: 347 NVRLSSET 354
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 396 DNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVL 455
D QT L + ++ IGC++G+ G+ I E+R++SGA I+I P S + +V
Sbjct: 277 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN----PVEGSTDRQVT- 331
Query: 456 INGEFEAVQEALFQITTRL 474
I G ++ A + I RL
Sbjct: 332 ITGSAASISLAQYLINVRL 350
>gi|301771920|ref|XP_002921378.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
isoform 2 [Ailuropoda melanoleuca]
Length = 582
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 114/476 (23%), Positives = 193/476 (40%), Gaps = 119/476 (25%)
Query: 39 SKSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEAS 98
SK P + R+L P + +IGK+G + I++ T I
Sbjct: 189 SKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKI------------------- 229
Query: 99 DNKKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQK 158
+ R EN G E S+ L++ + TS K
Sbjct: 230 ------------DVHRKENAGAAEKSITI-------------------LSTPEGTSAACK 258
Query: 159 ALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDK---- 214
++L + + E D + T+ + L++L + VG L+GK G +K+I++
Sbjct: 259 SILEIMHK--------EAQDIKFTE--EIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDT 308
Query: 215 ------LPTCALASDE-VVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHP 267
L L + E + + G V+T KA + I ++ ++ D S+ +H
Sbjct: 309 KITISPLQELTLYNPERTITVKGNVETCAKAEEEIMKKIRESYENDIASM----NLQAHL 364
Query: 268 LPDHSVSSQGA-PYATGHRDVADIHLPMPPSIPKFHESGVLDRPKP------SPEILTFR 320
+P ++++ G P +G MPP P + P P S E T
Sbjct: 365 IPGLNLNALGLFPPTSG----------MPP--PTSGPPSAMTPPYPHNSFTRSSETETVH 412
Query: 321 LLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRISAP 379
L VG +IGK G I+ L + G IK+ A + + R+++I+GP
Sbjct: 413 LFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPP--------- 463
Query: 380 QDAVLRVQTRIARAIPD------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
+A + Q RI I + E + + V S G ++GKGG + E++ LS A
Sbjct: 464 -EAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSA 522
Query: 434 YIRILGKDQIPKCASENEEVVL-INGEFEAVQEA---LFQITTRLRHHFFRDAFPS 485
+ ++ +DQ P EN++VV+ I G F A Q A + +I T+++ H + A S
Sbjct: 523 EV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVKQHQQQKALQS 574
>gi|414867455|tpg|DAA46012.1| TPA: hypothetical protein ZEAMMB73_887859 [Zea mays]
Length = 455
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 102/209 (48%), Gaps = 39/209 (18%)
Query: 318 TFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA-VSGTEDRLIVISGPAHPDDRI 376
+ R+LC E +G VIGK GA +R ++Q+TG IKV E + +RLI++S P + I
Sbjct: 213 SIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIIVSSNEIPTEPI 272
Query: 377 SAPQDAVLRVQTRIARA----------------IPDNREQTVMTRLLVASNQIGCLLGKG 420
S +A++ + ++ A + +N ++++ R+L AS IG ++GK
Sbjct: 273 SPTIEALILLHDKVLMAEVKRNHGGGMRCDELPVSENGDKSI--RILCASELIGSVIGKS 330
Query: 421 GSIIAEMRKLSGAYIR--------------ILGKDQIPK--CASENEEVVLINGEFEA-- 462
G+ + + + +GA I+ I+ ++IP + E ++L++ +
Sbjct: 331 GANVRRVEQQTGARIKVQEIDKDASGERLIIVSSNEIPTEPISPTIEALILLHDKVAGPP 390
Query: 463 --VQEALFQITTRLRHHFFRDAFPSINRP 489
+ AL +I +RLR RD + N P
Sbjct: 391 AIARGALTEIASRLRTRTLRDTSTANNPP 419
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 44 GGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEET-VSGSDERLVVIEASDNKK 102
G R+LC I VIGK G + ++ Q TG I+V+E S ERL+++ +++
Sbjct: 210 GDKSIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIIVSSNEIPT 269
Query: 103 E-TSENLEASI 112
E S +EA I
Sbjct: 270 EPISPTIEALI 280
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 44 GGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEET-VSGSDERLVVIEASDNKK 102
G R+LC I VIGK G + ++ Q TG I+V+E S ERL+++ +++
Sbjct: 310 GDKSIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIIVSSNEIPT 369
Query: 103 E-TSENLEASI 112
E S +EA I
Sbjct: 370 EPISPTIEALI 380
>gi|340914749|gb|EGS18090.1| putative pab1-binding protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 484
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 152/369 (41%), Gaps = 39/369 (10%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
+ R + +IGKGG + ++Q +G V + G +R++ +SG D +
Sbjct: 125 IHIRAVISSPEAATIIGKGGENVTKIRQMSGARCTVSDYQKGAVERILTVSGIV---DAV 181
Query: 377 SAPQDAVLRVQTRIARAIPDNRE-QTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYI 435
+ ++R P N+ +T RLL+ IG ++GKGG+ I E+++ SGA
Sbjct: 182 AKAFGLIIRTLNNEPLNEPSNQHSKTYPLRLLIPHVLIGSIIGKGGARIKEIQEASGA-- 239
Query: 436 RILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHF---FRDAFPSINRPLNP 492
R+ D ++E VV+ G +AV A + + + L F A S +
Sbjct: 240 RLNASDSCLPLSTERSLVVM--GVADAVHIATYYVGSTLLEQLNERFGGAAASAYATRSG 297
Query: 493 TFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKF---DAVGGPPPPGS---FHP-HDDHS 545
+ V I G Y N + A PPPP + HP H H
Sbjct: 298 GPVGAVPGGMQVIPYNPQPAGGHYGNRDAYYRARPDPRAHHMPPPPYAQPYGHPAHPVHP 357
Query: 546 AFMHHIHRPGMPPHMPDMKPWGPQGLME---VGGPMGFPDFVGPPHRRVP---------- 592
A +H P +GP ++ VG P P VGP + V
Sbjct: 358 AAAMPMHYGATP-----AAGYGPAPHVQPPHVGHPAAHP-HVGPHGQPVAGAHMPGQTIT 411
Query: 593 --VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQS 650
+ +P +V I G+ G + +IRQIS + I I +P+ + E ++ I+GT E A
Sbjct: 412 QQIYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQDNSNERLVTITGTEECNRMALY 471
Query: 651 LIQAFVMSE 659
++ + + +E
Sbjct: 472 MLYSRLENE 480
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 48/81 (59%), Gaps = 5/81 (6%)
Query: 400 QTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGE 459
QT+ ++ + ++ +G ++GKGG I E+R++SG+ I+I P+ S NE +V I G
Sbjct: 408 QTITQQIYIPNDMVGAIIGKGGQKINEIRQISGSVIKI----NEPQDNS-NERLVTITGT 462
Query: 460 FEAVQEALFQITTRLRHHFFR 480
E + AL+ + +RL + R
Sbjct: 463 EECNRMALYMLYSRLENEKHR 483
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 78/359 (21%), Positives = 139/359 (38%), Gaps = 58/359 (16%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
I R + + +IGK GE +++I Q +G V + G+ ER++ + + +
Sbjct: 125 IHIRAVISSPEAATIIGKGGENVTKIRQMSGARCTVSDYQKGAVERILTVSGIVDAVAKA 184
Query: 106 ENLEASIERSENNGREEASVADESDNKKEDS---------VNEGSVLMDGLNSEKETSKV 156
L I R+ NN +E N+ + V GS++ G KE +
Sbjct: 185 FGL---IIRTLNN-----EPLNEPSNQHSKTYPLRLLIPHVLIGSIIGKGGARIKEIQEA 236
Query: 157 QKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKLP 216
A L + + + E V+ + + + G +++Q+++
Sbjct: 237 SGARLNASDSCLPLSTE-----------RSLVVMGVADAVHIATYY-VGSTLLEQLNERF 284
Query: 217 TCALASDEVVQITGEVDTVRKALKLI---------------SHQLLDNSPRDHESIP--- 258
A AS + G V V +++I ++ PR H P
Sbjct: 285 GGAAASAYATRSGGPVGAVPGGMQVIPYNPQPAGGHYGNRDAYYRARPDPRAHHMPPPPY 344
Query: 259 ----GNPTGPSHP---LPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKF--HESGVLDR 309
G+P P HP +P H ++ A Y V H+ P + P H V
Sbjct: 345 AQPYGHPAHPVHPAAAMPMHYGATPAAGYGPA-PHVQPPHVGHPAAHPHVGPHGQPVAGA 403
Query: 310 PKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
P + +T ++ ++ VG +IGKGG I ++Q +G IK+ E + +RL+ I+G
Sbjct: 404 HMPG-QTITQQIYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQDNSNERLVTITG 461
>gi|432866565|ref|XP_004070866.1| PREDICTED: poly(rC)-binding protein 2-like [Oryzias latipes]
Length = 318
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 87/157 (55%), Gaps = 11/157 (7%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT--TSIF 69
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I+ ++ ++ + V RL+V ++Q G L+GKGG I E+R+ +GA
Sbjct: 70 KAFSMIIEKLEEDISNSMTNSTATSKPPVTMRLVVPASQCGSLIGKGGCKIKEIRESAGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
+++ G D +P + E + + G +++ E + QI
Sbjct: 130 QVQVAG-DMLP---NSTERAITVAGTPQSIIECVKQI 162
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 109/242 (45%), Gaps = 40/242 (16%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI 212
T+ + KA ++ E++ E + + + T +RL+V ++Q G L+GKGGC IK+I
Sbjct: 65 TTSIFKAFSMIIEKLEE-DISNSMTNSTATSKPPVTMRLVVPASQCGSLIGKGGCKIKEI 123
Query: 213 ------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGN 260
D LP +++ + + G ++ + +K I +L++ P+ +IP
Sbjct: 124 RESAGAQVQVAGDMLPN---STERAITVAGTPQSIIECVKQICIVMLESPPKG-VTIPYR 179
Query: 261 PTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKP-------- 312
P P+ + + G YA V H P + K H+ + P P
Sbjct: 180 PKPSGSPV----IFAGGQAYA-----VQGQHAIPQPDLTKLHQLAMQQSPFPIAHSNQGF 230
Query: 313 ------SPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVI 366
S + + L ++ +G +IG+ GA I ++Q +G IK+ V G+ DR + I
Sbjct: 231 QAGMDASAQTGSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTI 290
Query: 367 SG 368
+G
Sbjct: 291 TG 292
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 39/67 (58%)
Query: 593 VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLI 652
+ +P L+ I G GA + +IRQ+S A+I I +P G+T+ + I+G+ A+ LI
Sbjct: 245 LTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSHASISLAEYLI 304
Query: 653 QAFVMSE 659
A + SE
Sbjct: 305 NARLSSE 311
Score = 39.3 bits (90), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 396 DNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVL 455
D QT L + ++ IGC++G+ G+ I E+R++SGA I+I P S + +V
Sbjct: 235 DASAQTGSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN----PVEGSTDRQVT- 289
Query: 456 INGEFEAVQEALFQITTRL 474
I G ++ A + I RL
Sbjct: 290 ITGSHASISLAEYLINARL 308
>gi|403260495|ref|XP_003922705.1| PREDICTED: poly(rC)-binding protein 1 [Saimiri boliviensis
boliviensis]
Length = 302
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 87/157 (55%), Gaps = 11/157 (7%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTNAIFKA 71
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I ++ ++ + V RL+V + Q G L+GKGG I E+R+ +GA
Sbjct: 72 FAM--IIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
+++ G D +P + E + I G ++V E + QI
Sbjct: 130 QVQVAG-DMLP---NSTERAITIAGVPQSVTECVKQI 162
Score = 46.2 bits (108), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 73/153 (47%), Gaps = 29/153 (18%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T +S+ LRL+V +TQ G L+GKGGC IK
Sbjct: 65 TNAIFKAFAMIIDKL---EEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIK 121
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALK---LISHQLLDNSPRDH- 254
+I D LP +++ + I G +V + +K L+ + L SP+
Sbjct: 122 EIRESTGAQVQVAGDMLPN---STERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRV 178
Query: 255 ESIPGNPTGPSHPL-----PDHSVSSQGAPYAT 282
+IP P S P+ D + G P+AT
Sbjct: 179 MTIPYQPMPASSPVICAGGQDRCSDAAGYPHAT 211
>gi|307199010|gb|EFN79734.1| Poly(rC)-binding protein 3 [Harpegnathos saltator]
Length = 469
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 85/172 (49%), Gaps = 34/172 (19%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RL+ + VG +IGK G I++ ++E+G I + + +R++ ++GP
Sbjct: 15 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTVTGPT------ 66
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT------------------VMTRLLVASNQIGCLLG 418
+++ + T I + + Q + RL+V ++Q G L+G
Sbjct: 67 ----NSIFKAFTLICKKFEEWCSQFHDIQGGGAGGGGGVSRPPITLRLIVPASQCGSLIG 122
Query: 419 KGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
KGGS I E+R+++GA I++ + +P + E V I+G EA+ + ++ I
Sbjct: 123 KGGSKIKEIREVTGASIQV-ASEMLP---NSTERAVTISGTSEAITQCIYHI 170
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
Query: 392 RAIPDNREQTVMTR----LLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCA 447
R NR+Q + V + IGC++GKGG+ IAE+R++SGA IRI ++ +
Sbjct: 260 RTSNTNRQQPAANNQTHEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REG 317
Query: 448 SENEEVVLINGEFEAVQEALFQI 470
+ + I G +AV A + I
Sbjct: 318 GATDRTITITGNPDAVALAQYLI 340
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 593 VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKP---GATETVIIISGTPEQTHAAQ 649
+ VP L+ I G+ G + +IRQIS A I I++ + GAT+ I I+G P+ AQ
Sbjct: 278 MTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVALAQ 337
Query: 650 SLIQAFV 656
LI V
Sbjct: 338 YLINMSV 344
>gi|17384400|emb|CAD13196.1| hnRNP-E2 protein copy b [Xenopus laevis]
Length = 251
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 114/235 (48%), Gaps = 35/235 (14%)
Query: 158 KALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIKQI--- 212
KA ++ +++ E + + +T SSK LRL+V ++Q G L+GKGGC IK+I
Sbjct: 2 KAFSMIIDKL---EEDISSSMTNSTASSKPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 58
Query: 213 ---------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTG 263
D LP +++ + I G ++ + +K I +L++ P+ +IP P
Sbjct: 59 TGAQVQVAGDMLPN---STERAITIAGIPQSIIECVKQICVVMLESPPKG-VTIPYRPKP 114
Query: 264 PSHPL---PDHSVSSQGAPYATGHRDVADIH-LPMPPS-IPKFHE-----SGVLDRPKPS 313
S P+ + + QG YA D+ +H L M S P H SG +D S
Sbjct: 115 SSSPVIFAGGQAYTIQGQ-YAIPQPDLTKLHQLAMQQSHFPMSHSGNTGFSGGID---AS 170
Query: 314 PEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
+ + L ++ +G +IG+ GA I ++Q +G IK+ V G+ DR + I+G
Sbjct: 171 AQATSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSNDRQVTITG 225
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 104/260 (40%), Gaps = 47/260 (18%)
Query: 402 VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFE 461
V RL+V ++Q G L+GKGG I E+R+ +GA +++ G D +P + E + I G +
Sbjct: 30 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAG-DMLP---NSTERAITIAGIPQ 85
Query: 462 AVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGP 521
++ E + QI + + P P SP F G + + G Y+ P
Sbjct: 86 SIIECVKQICVVM----LESPPKGVTIPYRPK--PSSSPVI-FAGGQAYTIQGQYAIPQP 138
Query: 522 SFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFP 581
K H M H P M G GF
Sbjct: 139 DLTKL-----------------HQLAMQQSHFP-----------------MSHSGNTGFS 164
Query: 582 DFVGPPHRRVP--VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIIS 639
+ + + +P L+ I G GA + +IRQ+S A+I I +P G+ + + I+
Sbjct: 165 GGIDASAQATSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSNDRQVTIT 224
Query: 640 GTPEQTHAAQSLIQAFVMSE 659
G+ AQ LI + SE
Sbjct: 225 GSTASISLAQYLINVRLSSE 244
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 396 DNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVL 455
D Q L + ++ IGC++G+ G+ I E+R++SGA I+I + N+ V
Sbjct: 168 DASAQATSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE-----GSNDRQVT 222
Query: 456 INGEFEAVQEALFQITTRL 474
I G ++ A + I RL
Sbjct: 223 ITGSTASISLAQYLINVRL 241
>gi|242039711|ref|XP_002467250.1| hypothetical protein SORBIDRAFT_01g022040 [Sorghum bicolor]
gi|241921104|gb|EER94248.1| hypothetical protein SORBIDRAFT_01g022040 [Sorghum bicolor]
Length = 588
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 89/178 (50%), Gaps = 4/178 (2%)
Query: 314 PEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPD 373
P FR+L ++VG +IG G +R L +ET ++++ ++ ++I G P+
Sbjct: 52 PGTSVFRMLIPAQKVGVIIGHKGERVRRLCEETRACVRIIGGHLCAAEQAVIIFGREQPE 111
Query: 374 DRISAPQDAVLRV--QTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLS 431
+ + DA+LRV QT ++ + ++ R+LV S Q L+G+ G +I + + S
Sbjct: 112 EPLPPAMDALLRVYQQTINDESLDVGSDGVIVRRILVPSEQAESLIGEHGVMINSIMEAS 171
Query: 432 GAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFF-RDAFPSINR 488
IR+L D +P A E + VV I G V +AL + + LR + R P +R
Sbjct: 172 QTDIRVLDGD-LPPVALEEDRVVEIWGLPARVHKALELVASHLRKYLVDRSVIPLFDR 228
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 102/269 (37%), Gaps = 88/269 (32%)
Query: 42 FPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNK 101
+PG +FR+L P K+ +IG GE + ++ ++T +R+ + E+ V+I
Sbjct: 51 WPGTSVFRMLIPAQKVGVIIGHKGERVRRLCEETRACVRIIGGHLCAAEQAVII------ 104
Query: 102 KETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALL 161
GRE+ E+ ALL
Sbjct: 105 ----------------FGREQP--------------------------EEPLPPAMDALL 122
Query: 162 LVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDK------- 214
V+++ + E +D V R+LV S Q L+G+ G +I I +
Sbjct: 123 RVYQQTINDESLDVGSD------GVIVRRILVPSEQAESLIGEHGVMINSIMEASQTDIR 176
Query: 215 -----LPTCALASDEVVQITGEVDTVRKALKLISHQ----LLDNS-----------PRDH 254
LP AL D VV+I G V KAL+L++ L+D S P H
Sbjct: 177 VLDGDLPPVALEEDRVVEIWGLPARVHKALELVASHLRKYLVDRSVIPLFDRHVPMPILH 236
Query: 255 ESIP-----GNPTGPSHPLP--DHSVSSQ 276
+P P GP HP+ HSVS++
Sbjct: 237 VDVPPCHYIDYPEGPVHPVSPGYHSVSAE 265
>gi|328787572|ref|XP_393878.3| PREDICTED: IGF-II mRNA-binding protein [Apis mellifera]
gi|380027404|ref|XP_003697415.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Apis florea]
Length = 626
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 150/319 (47%), Gaps = 36/319 (11%)
Query: 175 EVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIKQI----DKLPTCALASD----- 223
EV QE SK LR+L + +G ++GKGG IK+I D T + +D
Sbjct: 253 EVTQQEAYGLSKGEISLRILAHNNLIGRIIGKGGTTIKKIMQDTDTKITVSSINDINNFN 312
Query: 224 --EVVQITGEVDTVRKALKLISHQLLDNSPRDHESI-PGNPTGPS-HPLPDHSVSSQGAP 279
++ + G +D + KA +IS++L + D +++ P + P HP+ +S+ G
Sbjct: 313 LERIITVKGSIDNMSKAESMISNKLRQSYENDLQAMAPQSLMFPGLHPMA--MMSTAGMG 370
Query: 280 YAT---GHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGG 336
Y++ G P S+P + G+ P + F L + VG +IG G
Sbjct: 371 YSSRGPGLYGSGPAPYPYQASLPT--QQGI---PIGDTQETAF-LYIPNTSVGAIIGSKG 424
Query: 337 AIIRSLKQETGCDIKVM-----EAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIA 391
+ IR++ + +G +K+ + V DR + I G P+ + A ++ + R
Sbjct: 425 SHIRNIIRFSGASVKIAPIEQDKPVDQQNDRKVTIVGS--PESQWKA--QYLIFEKMREE 480
Query: 392 RAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENE 451
+ + + +LV S Q+G ++GKGG + E+++++G+ I+ L + Q +++ E
Sbjct: 481 GFVAGTEDVRLTIEILVPSTQVGRIIGKGGQNVRELQRVTGSIIK-LSEQQSTSPSADEE 539
Query: 452 EVVLINGEFEAVQEALFQI 470
V I G F +VQ A +I
Sbjct: 540 ATVQIIGPFFSVQSAQRRI 558
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 137/341 (40%), Gaps = 63/341 (18%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRIS 377
R+L E VG +IG+ G+ IR + Q T + V S G ++ I I G +P++ +
Sbjct: 189 LRILVQSEMVGAIIGRQGSTIRQITQMTRARVDVHRKDSLGAAEKAITIYG--NPENCTN 246
Query: 378 APQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRI 437
A + ++ V + A + + R+L +N IG ++GKGG+ I ++ + + I +
Sbjct: 247 ACKK-IMEVTQQEAYGLSKGE---ISLRILAHNNLIGRIIGKGGTTIKKIMQDTDTKITV 302
Query: 438 LGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQ 497
+ I E ++ + G + + +A I+ +LR + D + + P L
Sbjct: 303 SSINDINNF--NLERIITVKGSIDNMSKAESMISNKLRQSYENDL-----QAMAPQSL-- 353
Query: 498 VSPFPSFIGRRELSPPGM-YSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGM 556
FP +S GM YS+ GP + GP P +P ++ +
Sbjct: 354 --MFPGLHPMAMMSTAGMGYSSRGPGLYG----SGPAP----YP-----------YQASL 392
Query: 557 PPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQ 616
P G P +G + +P + V I G G+ ++ I +
Sbjct: 393 PTQ------------------QGIP--IGDTQETAFLYIPNTSVGAIIGSKGSHIRNIIR 432
Query: 617 ISDAKITIT-----DPKPGATETVIIISGTPEQTHAAQSLI 652
S A + I P + + I G+PE AQ LI
Sbjct: 433 FSGASVKIAPIEQDKPVDQQNDRKVTIVGSPESQWKAQYLI 473
>gi|67971394|dbj|BAE02039.1| unnamed protein product [Macaca fascicularis]
Length = 316
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 142/329 (43%), Gaps = 68/329 (20%)
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQIDK----------LPTCALASDE-VVQITGEVDTVRK 237
L++L + VG L+GK G +K+I++ L L + E + + G V+T K
Sbjct: 16 LKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQELTLYNPERTITVKGNVETCAK 75
Query: 238 ALKLISHQLLDNSPRDHES-------IPG---NPTGPSHPLPDHSVSSQGAPYATGHRDV 287
A + I ++ ++ D S IPG N G P + G P A
Sbjct: 76 AEEEIMKKIRESYENDIASMNLQAHLIPGLNLNALGLFPPTSGMPPPTSGPPSA------ 129
Query: 288 ADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETG 347
M P P+F +S E T L VG +IGK G I+ L + G
Sbjct: 130 ------MTPPYPQFEQS----------ETETVHLFIPALSVGAIIGKQGQHIKQLSRFAG 173
Query: 348 CDIKVMEAVS-GTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPD------NREQ 400
IK+ A + + R+++I+GP +A + Q RI I + E
Sbjct: 174 ASIKIAPAEAPDAKVRMVIITGPP----------EAQFKAQGRIYGKIKEENFVSPKEEV 223
Query: 401 TVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVL-INGE 459
+ + V S G ++GKGG + E++ LS A + ++ +DQ P EN++VV+ I G
Sbjct: 224 KLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEV-VVPRDQTP---DENDQVVVKITGH 279
Query: 460 FEAVQEA---LFQITTRLRHHFFRDAFPS 485
F A Q A + +I T+++ H + A S
Sbjct: 280 FYACQVAQRKIQEILTQVKQHQQQKALQS 308
>gi|358387038|gb|EHK24633.1| hypothetical protein TRIVIDRAFT_54511 [Trichoderma virens Gv29-8]
Length = 369
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 138/353 (39%), Gaps = 65/353 (18%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT R + + G +IGKGG + L+ ETG V + V G DR++ I+G
Sbjct: 47 LTLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTITGGC------ 100
Query: 377 SAPQDAVLRVQTRIARAIPDNREQTVM-----------TRLLVASNQIGCLLGKGGSIIA 425
DA+ R +ARA+ + M +LL++ NQ+G ++G+ G I
Sbjct: 101 ----DAISRAYAIVARALLEGAPAVGMGGVIQSNGTHPIKLLISHNQMGTIIGRQGLKIK 156
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPS 485
++ +SG + + K+ +P+ E +V + G E +Q A+++I+ L + R
Sbjct: 157 HIQDVSGVRM-VAQKEMLPQS---TERIVEVQGTPEGIQRAIWEISKCLVDDWQRGTGTV 212
Query: 486 INRPLNPT-----FLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHP 540
+ P+ T S + SP M + G F GG P F
Sbjct: 213 LYNPVVRTQPSGSGSLGGSGYNGGGRGDYGSPRVMRTGNGADFSN----GGSRP---FSR 265
Query: 541 HDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLV 600
D A G P H D G + + +P +V
Sbjct: 266 RSDSDAANR-----GPPTH----------------------DENGEEIQTQNISIPADMV 298
Query: 601 PIIQGEDGACLKQIRQISDAKITITD-PKPGATETVIIISGTPEQTHAAQSLI 652
I G G+ + IR+ S A+I+I P E + I GT + +A L+
Sbjct: 299 GCIIGRGGSKISDIRKTSGARISIAKAPHDETGERMFTIMGTAKANESALFLL 351
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 93/211 (44%), Gaps = 25/211 (11%)
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQIDKLPTCAL---------ASDEVVQITGEVDTVRKAL 239
++LL+ Q+G ++G+ G IK I + + +++ +V++ G + +++A+
Sbjct: 135 IKLLISHNQMGTIIGRQGLKIKHIQDVSGVRMVAQKEMLPQSTERIVEVQGTPEGIQRAI 194
Query: 240 KLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQ----------GAPYATGHRDVAD 289
IS L+D+ R ++ NP + P S+ G+P + AD
Sbjct: 195 WEISKCLVDDWQRGTGTVLYNPVVRTQPSGSGSLGGSGYNGGGRGDYGSPRVMRTGNGAD 254
Query: 290 IHLPMPPSIPKFHESGVLDRPKPS-----PEILTFRLLCHDERVGGVIGKGGAIIRSLKQ 344
+ +S +R P+ EI T + + VG +IG+GG+ I +++
Sbjct: 255 FSNGGSRPFSRRSDSDAANRGPPTHDENGEEIQTQNISIPADMVGCIIGRGGSKISDIRK 314
Query: 345 ETGCDIKVMEA-VSGTEDRLIVISGPAHPDD 374
+G I + +A T +R+ I G A ++
Sbjct: 315 TSGARISIAKAPHDETGERMFTIMGTAKANE 345
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 396 DNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVL 455
+N E+ + + ++ +GC++G+GGS I+++RK SGA I I + P + E +
Sbjct: 281 ENGEEIQTQNISIPADMVGCIIGRGGSKISDIRKTSGARISIA---KAPHDET-GERMFT 336
Query: 456 INGEFEAVQEALFQITTRLRHHFFR 480
I G +A + ALF + L R
Sbjct: 337 IMGTAKANESALFLLYENLEAEKMR 361
>gi|332242553|ref|XP_003270449.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
isoform 2 [Nomascus leucogenys]
Length = 440
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 154/363 (42%), Gaps = 76/363 (20%)
Query: 163 VFERMVEVEPETEVADQENTKSSK--------FVLRLLVLSTQVGCLLGKGGCVIKQIDK 214
V E +V ++E A T SSK L++L + VG L+GK G +K+I++
Sbjct: 106 VVESCEQVNTDSETAVVNVTYSSKDQARHTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQ 165
Query: 215 ----------LPTCALASDE-VVQITGEVDTVRKALKLISHQLLDNSPRDHES------- 256
L L + E + + G V+T KA + I ++ ++ D S
Sbjct: 166 DTDTKITISPLQELTLYNPERTITVKGSVETCAKAEEEIMKKIRESYENDIASMNVQTHL 225
Query: 257 IPG---NPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPS 313
IPG N G P + G P A M P P+F +S
Sbjct: 226 IPGLNLNDLGLFPPTSGMPPPTSGPPSA------------MTPPYPQFEQS--------- 264
Query: 314 PEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHP 372
E T L VG +IGK G I+ L + G IK+ A + + R+++I+GP
Sbjct: 265 -ETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPP-- 321
Query: 373 DDRISAPQDAVLRVQTRIARAIPD------NREQTVMTRLLVASNQIGCLLGKGGSIIAE 426
+A + Q RI I + E + + V S G ++GKGG + E
Sbjct: 322 --------EAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNE 373
Query: 427 MRKLSGAYIRILGKDQIPKCASENEEVVL-INGEFEAVQEA---LFQITTRLRHHFFRDA 482
++ LS A + ++ +DQ P EN++VV+ I G F A Q A + +I T+++ H + A
Sbjct: 374 LQNLSSAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVKQHQQQKA 429
Query: 483 FPS 485
S
Sbjct: 430 LQS 432
>gi|324518489|gb|ADY47116.1| Heterogeneous nuclear ribonucleoprotein K [Ascaris suum]
gi|324519835|gb|ADY47493.1| Heterogeneous nuclear ribonucleoprotein K, partial [Ascaris suum]
Length = 361
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 148/343 (43%), Gaps = 50/343 (14%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISA 378
RLL G VIGKGG I+ L+ E CD + S T +R++ I A D+ I
Sbjct: 40 LRLLVPSRGAGAVIGKGGESIKRLRAE--CDATLTIPDSQTPERIVTIV--AEIDNVIRC 95
Query: 379 PQDAVLRV----QTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAY 434
+ + R+ +TR + R ++ + RLLV + G ++G+GG I E+R+ +
Sbjct: 96 VNEIIPRLDECLKTRDSDDEGSARGESEL-RLLVHQSHAGAIIGRGGYRIKELREETSTQ 154
Query: 435 IRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTF 494
+++ + C E V+ I G E + + I L+ + PS RP F
Sbjct: 155 LKVYSQC----CPQSTERVIQIIGVPEKIIACVILIINMLKEIPIKG--PS--RPYESMF 206
Query: 495 LDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRP 554
D P+F+ H++ GG PP ++
Sbjct: 207 YD-----PNFV------------------HEY---GGFPPDRNYRGMGPRGGMYGGG--- 237
Query: 555 GMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQI 614
+PP P P+G +G M +G P G P + V +P L I G+ G + +I
Sbjct: 238 -LPPRAPRF-PYGGRG-MGMGVSPFPPAPFGGPMQTTQVTIPNELGGTIIGKGGERINRI 294
Query: 615 RQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVM 657
R+ S A I + +P+ +E +I ISG+ Q AQ L+Q +++
Sbjct: 295 REESGAHI-VVEPQQPNSERIITISGSHAQIQTAQYLLQQWIV 336
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 92/223 (41%), Gaps = 38/223 (17%)
Query: 173 ETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKLPT---------CALASD 223
+T +D E + + LRLLV + G ++G+GG IK++ + + C +++
Sbjct: 108 KTRDSDDEGSARGESELRLLVHQSHAGAIIGRGGYRIKELREETSTQLKVYSQCCPQSTE 167
Query: 224 EVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPL------PDHSVSSQG 277
V+QI G + + + LI + L + IP GPS P P+ G
Sbjct: 168 RVIQIIGVPEKIIACVILIINML--------KEIP--IKGPSRPYESMFYDPNFVHEYGG 217
Query: 278 AP----YATGHRDVADIHLPMPPSIPKFHESG--------VLDRPKPSPEILTFRLLCHD 325
P Y +PP P+F G + T ++ +
Sbjct: 218 FPPDRNYRGMGPRGGMYGGGLPPRAPRFPYGGRGMGMGVSPFPPAPFGGPMQTTQVTIPN 277
Query: 326 ERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
E G +IGKGG I +++E+G I V+E +R+I ISG
Sbjct: 278 ELGGTIIGKGGERINRIREESGAHI-VVEPQQPNSERIITISG 319
>gi|397495989|ref|XP_003818826.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Pan paniscus]
gi|397495991|ref|XP_003818827.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Pan paniscus]
Length = 403
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 150/354 (42%), Gaps = 62/354 (17%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT R+L H + VG +IGK G ++ +++++ I + E +R+ I+G
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITG------ST 69
Query: 377 SAPQDAVLRVQTRIAR---AIPDNREQT----VMTRLLVASNQIGCLLGKGGSIIAEMRK 429
+A AV + ++ A P N V RL++ ++Q G L+GK G+ I E+R+
Sbjct: 70 AAVFHAVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE 129
Query: 430 LSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRP 489
+GA +++ G D +P + E V ++G +A+ + QI + + A P
Sbjct: 130 TTGAQVQVAG-DLLP---NSTERAVTVSGVPDAIILCVRQICAVILESPPKGA----TIP 181
Query: 490 LNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMH 549
+P+ +G LS +S G ++ AV +
Sbjct: 182 YHPSL---------SLGTVLLSANQGFSVQG----QYGAV-----------TPAEVTKLQ 217
Query: 550 HIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGA 609
+ +P P M P ++ G +F+ VP L+ + G G+
Sbjct: 218 QLSSHAVPFATPSMVPG-----LDPGTQTSSQEFL----------VPNDLIGCVIGRQGS 262
Query: 610 CLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSETETT 663
+ +IRQ+S A I I + GA E + I+G+P AQ LI A + + T+
Sbjct: 263 KISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYLITACLETAKSTS 316
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 78/358 (21%), Positives = 135/358 (37%), Gaps = 118/358 (32%)
Query: 178 DQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKLPTCALASDE------VVQITGE 231
++E S LR+L+ +VG ++GK G +K+I + + + E + ITG
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGS 68
Query: 232 VDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIH 291
V A+ +I+ +L + D + P N
Sbjct: 69 TAAVFHAVSMIAFKLDE----DLCAAPAN------------------------------- 93
Query: 292 LPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIK 351
G + RP +T RL+ + G +IGK G I+ +++ TG ++
Sbjct: 94 ------------GGNVSRPP-----VTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQ 136
Query: 352 VM-EAVSGTEDRLIVISG--------------------------PAHPDDRI-----SAP 379
V + + + +R + +SG P HP + SA
Sbjct: 137 VAGDLLPNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSAN 196
Query: 380 QD-------------AVLRVQTRIARAIP----------DNREQTVMTRLLVASNQIGCL 416
Q V ++Q + A+P D QT LV ++ IGC+
Sbjct: 197 QGFSVQGQYGAVTPAEVTKLQQLSSHAVPFATPSMVPGLDPGTQTSSQEFLVPNDLIGCV 256
Query: 417 LGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRL 474
+G+ GS I+E+R++SGA+I+I + + E V I G ++ A + IT L
Sbjct: 257 IGRQGSKISEIRQMSGAHIKIGNQAE-----GAGERHVTITGSPVSIALAQYLITACL 309
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 93/207 (44%), Gaps = 20/207 (9%)
Query: 177 ADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI------------DKLPTCALASDE 224
A+ N LRL++ ++Q G L+GK G IK+I D LP +++
Sbjct: 92 ANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPN---STER 148
Query: 225 VVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPT---GPSHPLPDHSVSSQGAPYA 281
V ++G D + ++ I +L++ P+ +IP +P+ G + S QG A
Sbjct: 149 AVTVSGVPDAIILCVRQICAVILESPPKG-ATIPYHPSLSLGTVLLSANQGFSVQGQYGA 207
Query: 282 TGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRS 341
+V + ++P F ++ P + + L ++ +G VIG+ G+ I
Sbjct: 208 VTPAEVTKLQQLSSHAVP-FATPSMVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISE 266
Query: 342 LKQETGCDIKVMEAVSGTEDRLIVISG 368
++Q +G IK+ G +R + I+G
Sbjct: 267 IRQMSGAHIKIGNQAEGAGERHVTITG 293
>gi|367027192|ref|XP_003662880.1| hypothetical protein MYCTH_2304021 [Myceliophthora thermophila ATCC
42464]
gi|347010149|gb|AEO57635.1| hypothetical protein MYCTH_2304021 [Myceliophthora thermophila ATCC
42464]
Length = 374
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 146/359 (40%), Gaps = 63/359 (17%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT R + + G +IGKGG + L++ETG V + V G DR++ ISG
Sbjct: 50 LTLRAIVSSKEAGVIIGKGGKNVADLREETGVKAGVSKVVQGVYDRVLTISGGC------ 103
Query: 377 SAPQDAVLRVQTRIARAIPDNREQTVM-----------TRLLVASNQIGCLLGKGGSIIA 425
+A+ R + +AR++ + M +LL++ NQ+G ++G+ G I
Sbjct: 104 ----EAISRAYSVVARSLLEGAPTMGMGGVIQNNGTHPIKLLISHNQMGTIIGRQGLKIK 159
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPS 485
++ +SG + + K+ +P+ E +V + G E +Q A+++I L + R
Sbjct: 160 YIQDVSGVRM-VAQKEMLPQS---TERIVEVQGTPEGIQRAVWEICKCLVDDWQRGTGTV 215
Query: 486 INRPLNPTFLDQVSPFPSFIG----RRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPH 541
+ NP Q P G ++ +P G S + + D GG P +
Sbjct: 216 L---YNPVVRTQGVGAPGISGGSSYMQDRAPYGG-SRVTRTGNGADFSGGGSRPYTRRSD 271
Query: 542 DDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVP 601
D +A G P H D G + + +P +V
Sbjct: 272 SDPAAR-------GPPTH----------------------DENGEEIQTQNISIPADMVG 302
Query: 602 IIQGEDGACLKQIRQISDAKITITD-PKPGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
I G G+ + +IR+ S A+I+I P E + I G+ + A L+ + +E
Sbjct: 303 CIIGRAGSKISEIRKTSGARISIAKAPHDETGERMFTIMGSAKANETALFLLYENLEAE 361
>gi|317418810|emb|CBN80848.1| PolyrC-binding protein 2 [Dicentrarchus labrax]
Length = 306
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 110/241 (45%), Gaps = 39/241 (16%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI 212
T+ + KA ++ E++ E + + + + T LR++V ++Q G L+GKGGC IK+I
Sbjct: 65 TTAIFKAFSMIIEKLEE-DISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEI 123
Query: 213 ------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGN 260
D LP +++ + I G ++ + +K I +L++ P+ +IP
Sbjct: 124 RESTGAQVQVAGDMLPN---STERAITIAGTPQSIIECVKQICVVMLESPPKG-VTIPYR 179
Query: 261 PTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKP-------- 312
P P+ + + G YA V H P + K H+ + P P
Sbjct: 180 PKPSGSPV----IFAGGQAYA-----VQGQHAIPQPDLTKLHQLAMQQSPFPIAPSNQGF 230
Query: 313 -----SPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVIS 367
S + + + ++ +G +IG+ GA I ++Q +G IK+ V G+ DR + I+
Sbjct: 231 TGIDASAQTSSHEMTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVDGSTDRQVTIT 290
Query: 368 G 368
G
Sbjct: 291 G 291
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 88/157 (56%), Gaps = 11/157 (7%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTTAIFK- 70
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I+ ++ ++ + V R++V ++Q G L+GKGG I E+R+ +GA
Sbjct: 71 -AFSMIIEKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
+++ G D +P + E + I G +++ E + QI
Sbjct: 130 QVQVAG-DMLP---NSTERAITIAGTPQSIIECVKQI 162
Score = 45.4 bits (106), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%)
Query: 593 VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLI 652
+ +P L+ I G GA + +IRQ+S A+I I +P G+T+ + I+G+P A+ LI
Sbjct: 244 MTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVDGSTDRQVTITGSPASISLAEYLI 303
Query: 653 QA 654
A
Sbjct: 304 NA 305
>gi|348528761|ref|XP_003451884.1| PREDICTED: poly(rC)-binding protein 2-like [Oreochromis niloticus]
Length = 317
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 110/241 (45%), Gaps = 39/241 (16%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI 212
T+ + KA ++ E++ E + + + + T LR++V ++Q G L+GKGGC IK+I
Sbjct: 65 TTAIFKAFSMIIEKLEE-DISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEI 123
Query: 213 ------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGN 260
D LP +++ + I G ++ + +K I +L++ P+ +IP
Sbjct: 124 RESTGAQVQVAGDMLPN---STERAITIAGTPQSIIECVKQICVVMLESPPKGV-TIPYR 179
Query: 261 PTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKP-------- 312
P P+ + + G YA V H P + K H+ + P P
Sbjct: 180 PKPSGSPV----IFAGGQAYA-----VQGQHAIPQPDLTKLHQLAMQQSPFPIAPSNQGF 230
Query: 313 -----SPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVIS 367
S + + + ++ +G +IG+ GA I ++Q +G IK+ V G+ DR + I+
Sbjct: 231 TGMDASAQTSSHEMTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVDGSTDRQVTIT 290
Query: 368 G 368
G
Sbjct: 291 G 291
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 88/157 (56%), Gaps = 11/157 (7%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTTAIFK- 70
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I+ ++ ++ + V R++V ++Q G L+GKGG I E+R+ +GA
Sbjct: 71 -AFSMIIEKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
+++ G D +P + E + I G +++ E + QI
Sbjct: 130 QVQVAG-DMLP---NSTERAITIAGTPQSIIECVKQI 162
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%)
Query: 593 VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLI 652
+ +P L+ I G GA + +IRQ+S A+I I +P G+T+ + I+G+P A+ LI
Sbjct: 244 MTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVDGSTDRQVTITGSPASISLAEYLI 303
Query: 653 QAFVMSE 659
A + SE
Sbjct: 304 NARLSSE 310
>gi|432857624|ref|XP_004068722.1| PREDICTED: poly(rC)-binding protein 2-like [Oryzias latipes]
Length = 317
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 110/241 (45%), Gaps = 39/241 (16%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI 212
T+ + KA ++ E++ E + + + + T LR++V ++Q G L+GKGGC IK+I
Sbjct: 65 TTAIFKAFSMIIEKLEE-DISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEI 123
Query: 213 ------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGN 260
D LP +++ + I G ++ + +K I +L++ P+ +IP
Sbjct: 124 RESTGAQVQVAGDMLPN---STERAITIAGTPQSIIECVKQICVVMLESPPKGV-TIPYR 179
Query: 261 PTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKP-------- 312
P P+ + + G YA V H P + K H+ + P P
Sbjct: 180 PKPSGSPV----IFAGGQAYA-----VQGQHAIPQPDLTKLHQLAMQQSPFPIAPSNQGF 230
Query: 313 -----SPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVIS 367
S + + + ++ +G +IG+ GA I ++Q +G IK+ V G+ DR + I+
Sbjct: 231 TGIDASAQTSSHEMTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVDGSTDRQVTIT 290
Query: 368 G 368
G
Sbjct: 291 G 291
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 88/157 (56%), Gaps = 11/157 (7%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTTAIFK- 70
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I+ ++ ++ + V R++V ++Q G L+GKGG I E+R+ +GA
Sbjct: 71 -AFSMIIEKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
+++ G D +P + E + I G +++ E + QI
Sbjct: 130 QVQVAG-DMLP---NSTERAITIAGTPQSIIECVKQI 162
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%)
Query: 593 VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLI 652
+ +P L+ I G GA + +IRQ+S A+I I +P G+T+ + I+G+P A+ LI
Sbjct: 244 MTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVDGSTDRQVTITGSPASISLAEYLI 303
Query: 653 QAFVMSE 659
A + SE
Sbjct: 304 NARLSSE 310
>gi|196001809|ref|XP_002110772.1| hypothetical protein TRIADDRAFT_54022 [Trichoplax adhaerens]
gi|190586723|gb|EDV26776.1| hypothetical protein TRIADDRAFT_54022 [Trichoplax adhaerens]
Length = 560
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 149/315 (47%), Gaps = 41/315 (13%)
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQI-----DKLPTCAL------ASDEVVQITGEVDTVRK 237
L++L + +G L+GK G VIK I K+ L S+ + + G V+ +
Sbjct: 232 LKILAHNNLIGRLIGKNGNVIKSIMNQTNSKITISKLEDLKSGYSERTITVIGTVENSSR 291
Query: 238 ALKLISHQLLDNSPRDHESIPGNPTGPS----------HPLPDH---SVSSQGAPYATGH 284
A L+S +L +D S+ G S +PL + SVS G+ +
Sbjct: 292 AEALLSAKLRSYYKQDMASMIPQRQGQSSANSNSNGSSYPLSNSTTSSVSDSGSLIDSAA 351
Query: 285 RDVADIHLPMPPSIPKFHESGVLDRPK-PSPEILTFRLLCHDERVGGVIGKGGAIIRSLK 343
++ + +P PS + S L+ S EI T + + VIG G + +L+
Sbjct: 352 --ISPLSIPNSPSGLFSNNSVFLENDNVQSDEIETTAIYIPIQTFNYVIGARGNQLPALE 409
Query: 344 QETGCDIKVMEAV-SGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTV 402
Q +G +++++++ SG +R +V++G A S+ A L + ++ + + E ++
Sbjct: 410 QISGASLQLVQSMYSGANERKVVVNGNA------SSQWKAQLSIFNKVGEGLTPSEELSL 463
Query: 403 MTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEV-VLINGEFE 461
T +LV S +G ++GKGGS + +++ +GA I +IP+ ++ ++V V I G F
Sbjct: 464 RTEILVPSPLVGRIIGKGGSTVRQLQSQTGAMI------EIPRGMADGDKVSVHIKGTFL 517
Query: 462 AVQEALFQITTRLRH 476
A Q A +I + +R
Sbjct: 518 ASQAAQRRIRSIIRQ 532
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 81/172 (47%), Gaps = 13/172 (7%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRIS 377
R+L E VG +IG+ G IRS+ Q+T + V S G+ ++ I I G PD S
Sbjct: 140 LRILVPTEMVGAIIGREGNTIRSITQQTQARVDVHRRESLGSAEKAITILGT--PDSCTS 197
Query: 378 APQDAVLRVQTRIARAIPDNR---EQ-----TVMTRLLVASNQIGCLLGKGGSIIAEMRK 429
A +Q+ + P + EQ + ++L +N IG L+GK G++I +
Sbjct: 198 AALQIAKIMQSELLSTNPQLKLKVEQGHPIPNIPLKILAHNNLIGRLIGKNGNVIKSIMN 257
Query: 430 LSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRD 481
+ + I I + + SE V+ E + EAL ++ +LR ++ +D
Sbjct: 258 QTNSKITISKLEDLKSGYSERTITVIGTVENSSRAEAL--LSAKLRSYYKQD 307
>gi|444021|emb|CAA82631.1| sub2.3 [Homo sapiens]
Length = 299
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 87/157 (55%), Gaps = 11/157 (7%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTNAIFKA 71
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I ++ ++ + V RL+V + Q G L+GKGG I E+R+ +GA
Sbjct: 72 FAM--IIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
+++ G D +P + E + I G ++V E + QI
Sbjct: 130 QVQVAG-DMLP---NSTERAITIAGVPQSVTECVKQI 162
Score = 46.2 bits (108), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 73/153 (47%), Gaps = 29/153 (18%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T +S+ LRL+V +TQ G L+GKGGC IK
Sbjct: 65 TNAIFKAFAMIIDKL---EEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIK 121
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALK---LISHQLLDNSPRDH- 254
+I D LP +++ + I G +V + +K L+ + L SP+
Sbjct: 122 EIRESTGAQVQVAGDMLPN---STERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRV 178
Query: 255 ESIPGNPTGPSHPL-----PDHSVSSQGAPYAT 282
+IP P S P+ D + G P+AT
Sbjct: 179 MTIPYQPMPASSPVICAGGQDRCSDAAGYPHAT 211
>gi|432092458|gb|ELK25073.1| Poly(rC)-binding protein 4 [Myotis davidii]
Length = 403
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 148/358 (41%), Gaps = 70/358 (19%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT R+L H + VG +IGK G ++ +++++ I + E +R+ I+G
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTA----- 70
Query: 377 SAPQDAVLRVQTRIARAI-------PDNREQT----VMTRLLVASNQIGCLLGKGGSIIA 425
AV + IA + P N V RL++ ++Q G L+GK G+ I
Sbjct: 71 -----AVFHAVSMIAFKLDEDLCSAPANGGTVSRPPVTLRLVIPASQCGSLIGKAGTKIK 125
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPS 485
E+R+ +GA +++ G D +P + E V ++G +A+ + QI + + A
Sbjct: 126 EIRETTGAQVQVAG-DLLP---NSTERAVTVSGVPDAIILCVRQICAVILESPPKGA--- 178
Query: 486 INRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHS 545
P +P+ +G LS +N G F GG P
Sbjct: 179 -TIPYHPSL---------SLGTVLLS-----ANQG--FSVQSQYGGVTP--------AEV 213
Query: 546 AFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQG 605
+ + +P P M P ++ G +F +VP L+ + G
Sbjct: 214 TKLQQLSGHAVPFGSPSMVPG-----LDPGAQTSSQEF----------LVPNDLIGCVIG 258
Query: 606 EDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSETETT 663
G+ + +IRQ+S A I I + GA E + I+G+P AQ LI A + + T+
Sbjct: 259 RQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYLITACLETAKSTS 316
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 134/358 (37%), Gaps = 118/358 (32%)
Query: 178 DQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKLPTCALASDE------VVQITGE 231
++E S LR+L+ +VG ++GK G +K+I + + + E + ITG
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGS 68
Query: 232 VDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIH 291
V A+ +I+ +L + D S P N
Sbjct: 69 TAAVFHAVSMIAFKLDE----DLCSAPAN------------------------------- 93
Query: 292 LPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIK 351
G + RP +T RL+ + G +IGK G I+ +++ TG ++
Sbjct: 94 ------------GGTVSRPP-----VTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQ 136
Query: 352 VM-EAVSGTEDRLIVISG--------------------------PAHPDDRI-----SAP 379
V + + + +R + +SG P HP + SA
Sbjct: 137 VAGDLLPNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSAN 196
Query: 380 QD-------------AVLRVQTRIARAIP----------DNREQTVMTRLLVASNQIGCL 416
Q V ++Q A+P D QT LV ++ IGC+
Sbjct: 197 QGFSVQSQYGGVTPAEVTKLQQLSGHAVPFGSPSMVPGLDPGAQTSSQEFLVPNDLIGCV 256
Query: 417 LGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRL 474
+G+ GS I+E+R++SGA+I+I + + E V I G ++ A + IT L
Sbjct: 257 IGRQGSKISEIRQMSGAHIKIGNQAE-----GAGERHVTITGSPVSIALAQYLITACL 309
>gi|73985377|ref|XP_849987.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Canis lupus
familiaris]
gi|301767222|ref|XP_002919000.1| PREDICTED: poly(rC)-binding protein 4-like isoform 1 [Ailuropoda
melanoleuca]
Length = 403
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 150/354 (42%), Gaps = 62/354 (17%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT R+L H + VG +IGK G ++ +++++ I + E +R+ I+G
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITG------ST 69
Query: 377 SAPQDAVLRVQTRIAR---AIPDNREQT----VMTRLLVASNQIGCLLGKGGSIIAEMRK 429
+A AV + ++ A P N V RL++ ++Q G L+GK G+ I E+R+
Sbjct: 70 AAVFHAVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE 129
Query: 430 LSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRP 489
+GA +++ G D +P + E V ++G +A+ + QI + + A P
Sbjct: 130 TTGAQVQVAG-DLLP---NSTERAVTVSGVPDAIILCVRQICAVILESPPKGA----TIP 181
Query: 490 LNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMH 549
+P+ +G LS +S G ++ AV +
Sbjct: 182 YHPSL---------SLGTVLLSANQGFSVQG----QYGAV-----------TPAEVTKLQ 217
Query: 550 HIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGA 609
+ +P P M P ++ G +F+ VP L+ + G G+
Sbjct: 218 QLSGHAVPFASPSMVPG-----LDPGAQTSSQEFL----------VPNDLIGCVIGRQGS 262
Query: 610 CLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSETETT 663
+ +IRQ+S A I I + GA E + I+G+P AQ LI A + + T+
Sbjct: 263 KISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYLITACLETAKSTS 316
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 93/207 (44%), Gaps = 20/207 (9%)
Query: 177 ADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI------------DKLPTCALASDE 224
A+ N LRL++ ++Q G L+GK G IK+I D LP +++
Sbjct: 92 ANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPN---STER 148
Query: 225 VVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPT---GPSHPLPDHSVSSQGAPYA 281
V ++G D + ++ I +L++ P+ +IP +P+ G + S QG A
Sbjct: 149 AVTVSGVPDAIILCVRQICAVILESPPKG-ATIPYHPSLSLGTVLLSANQGFSVQGQYGA 207
Query: 282 TGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRS 341
+V + ++P F ++ P + + L ++ +G VIG+ G+ I
Sbjct: 208 VTPAEVTKLQQLSGHAVP-FASPSMVPGLDPGAQTSSQEFLVPNDLIGCVIGRQGSKISE 266
Query: 342 LKQETGCDIKVMEAVSGTEDRLIVISG 368
++Q +G IK+ G +R + I+G
Sbjct: 267 IRQMSGAHIKIGNQAEGAGERHVTITG 293
>gi|345486914|ref|XP_001607400.2| PREDICTED: poly(rC)-binding protein 3-like [Nasonia vitripennis]
Length = 476
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 85/173 (49%), Gaps = 35/173 (20%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RL+ + VG +IGK G I++ ++E+G I + + +R++ ++GP
Sbjct: 20 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTVTGPT------ 71
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT-------------------VMTRLLVASNQIGCLL 417
+++ + T I + + Q + RL+V ++Q G L+
Sbjct: 72 ----NSIFKAFTLICKKFEEWCSQFHDIQGGGNAGGGGGVPRPPITLRLIVPASQCGSLI 127
Query: 418 GKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
GKGGS I E+R+++GA I++ + +P + E V I+G EA+ + ++ I
Sbjct: 128 GKGGSKIKEIREVTGASIQV-ASEMLP---NSTERAVTISGTSEAITQCIYHI 176
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 97/230 (42%), Gaps = 45/230 (19%)
Query: 187 FVLRLLVLSTQVGCLLGKGGCVIKQIDKLPTCAL---------ASDEVVQITGEVDTVRK 237
LRL+V ++Q G L+GKGG IK+I ++ ++ +++ V I+G + + +
Sbjct: 112 ITLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASEMLPNSTERAVTISGTSEAITQ 171
Query: 238 ALKLISHQLLDNSPRDHESIPGNPT----GPSHPLPDHSVSSQGAPYATGHRDVADI--- 290
+ I +L++ P+ +IP P GP + + QG H D+ +
Sbjct: 172 CIYHICCVMLESPPKG-ATIPYRPKPQVGGPVILAGGQAFTIQGNYAVPAHSDMGKLGSS 230
Query: 291 -----------HLPMPPSIPKFH------------ESGVLDRPKPSPEILTFRLLCHDER 327
L P + + + +R +P+ T + +E
Sbjct: 231 PLAGLAALGLGGLAAPANTGGLNPAALAALAGSQLRTNNANRQQPAANNQTHEMTVPNEL 290
Query: 328 VGGVIGKGGAIIRSLKQETGCDIKVM---EAVSGTEDRLIVISGPAHPDD 374
+G +IGKGG I ++Q +G I++ E G DR I I+G +PD
Sbjct: 291 IGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGPTDRTITITG--NPDS 338
Score = 42.7 bits (99), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 6/78 (7%)
Query: 397 NREQTVMTR----LLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEE 452
NR+Q + V + IGC++GKGG+ IAE+R++SGA IRI ++ + +
Sbjct: 271 NRQQPAANNQTHEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGPTDR 328
Query: 453 VVLINGEFEAVQEALFQI 470
+ I G ++V A + I
Sbjct: 329 TITITGNPDSVALAQYLI 346
Score = 39.3 bits (90), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 593 VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKP---GATETVIIISGTPEQTHAAQ 649
+ VP L+ I G+ G + +IRQIS A I I++ + G T+ I I+G P+ AQ
Sbjct: 284 MTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGPTDRTITITGNPDSVALAQ 343
Query: 650 SLIQAFV 656
LI V
Sbjct: 344 YLINMSV 350
>gi|307189125|gb|EFN73581.1| Insulin-like growth factor 2 mRNA-binding protein 1 [Camponotus
floridanus]
Length = 587
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 155/334 (46%), Gaps = 42/334 (12%)
Query: 175 EVADQE--NTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI----DKLPTCALASD----- 223
+V QE +T + L++L + +G ++GKGG IK+I D T + +D
Sbjct: 213 DVMQQEAASTNKGEITLKILAHNNLIGRIIGKGGNTIKRIMQDTDSKITVSSINDINSFN 272
Query: 224 --EVVQITGEVDTVRKALKLISHQLLDNSPRDHESI-PGNPTGPS-HPLPDHSVSSQGAP 279
++ + G ++ + KA +IS +L + D +++ P + P HP+ +S+ G
Sbjct: 273 LERIITVKGTIENMSKAESMISSKLRQSYENDLQAMAPQSMMFPGLHPMA--MMSTAGMG 330
Query: 280 YAT---GHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGG 336
Y++ G P S+P + GV P + TF L + VG +IG G
Sbjct: 331 YSSRGPGLYGSGPAPYPYQSSLPT--QQGV---PASDTQETTF-LYIPNNSVGAIIGTKG 384
Query: 337 AIIRSLKQETGCDIKV--ME----AVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRI 390
+ IR++ + +G +K+ +E A TE ++ +I P+ + A ++ + R
Sbjct: 385 SHIRNIIRFSGASVKIAPLEQDKPAEQQTERKVTII---GSPESQWKA--QYLIFEKMRE 439
Query: 391 ARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASEN 450
+ + + +LV S Q+G ++GKGG + E+++++G+ I++ + P A E
Sbjct: 440 EGYVAGTEDVRLTIEILVPSTQVGRIIGKGGQNVRELQRVTGSVIKLSEQQATPPSA-EE 498
Query: 451 EEVVLINGEFEAVQEALFQITTRLRHHFFRDAFP 484
E V I G F +VQ A R+R + P
Sbjct: 499 ETTVHIIGPFFSVQSA----QRRIRAMVLQSGTP 528
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 138/342 (40%), Gaps = 65/342 (19%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRIS 377
R+L + VG +IG+ G+ IR + Q + + V + G+ ++ I I G +P++ +
Sbjct: 149 LRILVQSDMVGAIIGRQGSTIRQITQVSRARVDVHRKDNVGSLEKAITIYG--NPENCTN 206
Query: 378 APQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRI 437
A + + +Q A + + ++L +N IG ++GKGG+ I + + + + I +
Sbjct: 207 ACKKILDVMQQEAA----STNKGEITLKILAHNNLIGRIIGKGGNTIKRIMQDTDSKITV 262
Query: 438 LGKDQIPKCASEN-EEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLD 496
I S N E ++ + G E + +A I+++LR + D + + P
Sbjct: 263 ---SSINDINSFNLERIITVKGTIENMSKAESMISSKLRQSYENDL-----QAMAP---- 310
Query: 497 QVSPFPSFIGRRELSPPGM-YSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPG 555
Q FP +S GM YS+ GP + GP P +P+
Sbjct: 311 QSMMFPGLHPMAMMSTAGMGYSSRGPGLYG----SGPAP----YPYQS------------ 350
Query: 556 MPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIR 615
+P + G P + +P + V I G G+ ++ I
Sbjct: 351 ---SLPTQQ--------------GVP--ASDTQETTFLYIPNNSVGAIIGTKGSHIRNII 391
Query: 616 QISDAKITIT-----DPKPGATETVIIISGTPEQTHAAQSLI 652
+ S A + I P TE + I G+PE AQ LI
Sbjct: 392 RFSGASVKIAPLEQDKPAEQQTERKVTIIGSPESQWKAQYLI 433
>gi|154319404|ref|XP_001559019.1| hypothetical protein BC1G_02183 [Botryotinia fuckeliana B05.10]
Length = 453
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 143/354 (40%), Gaps = 47/354 (13%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISA 378
R + VIGKGG + +++ +G V + G +R++ +SG D ++
Sbjct: 128 VRSVITSAEAATVIGKGGENVSLVRKLSGAKCTVSDYQKGAVERILTVSGVV---DAVAK 184
Query: 379 PQDAVLR-VQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRI 437
++R + A D+ +T RLL+ IG ++GKGG I E+++ SGA R+
Sbjct: 185 AFGLIIRTLNNEPLEAPSDSTSKTYPLRLLIPHILIGSIIGKGGVRIKEIQEASGA--RL 242
Query: 438 LGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQ 497
D ++E VVL G +AV A + + + L F +
Sbjct: 243 NASDSYLPLSTERSLVVL--GVADAVHIATYYVGSTL--------FEQLTERFG------ 286
Query: 498 VSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMP 557
P S R P G+ P+ D H +S HI
Sbjct: 287 -GPAASAYASRSGGPAGVVPGAMPNHTVKDR------------HLTNSQLPLHITGGHAS 333
Query: 558 PHMPDMKPWGPQGLMEVG----------GPMGFPDFVGPPHRRVP--VVVPRSLVPIIQG 605
P + GPQ + G GP G P P + + + +P +V I G
Sbjct: 334 PAVGGYGGVGPQQPQQAGHAVPQPHGATGPQGQPMPGAIPGQPLTQQIFIPNDMVGAIIG 393
Query: 606 EDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
+ GA + +IRQ+S + I I +P+ + E ++ I+GT E A ++ + + SE
Sbjct: 394 KGGAKINEIRQLSGSVIKINEPQDNSNERLVTITGTAECNQMALYMLYSRLESE 447
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 110/257 (42%), Gaps = 50/257 (19%)
Query: 156 VQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKL 215
V KA L+ R + EP +D + S + LRLL+ +G ++GKGG IK+I +
Sbjct: 182 VAKAFGLII-RTLNNEPLEAPSD---STSKTYPLRLLIPHILIGSIIGKGGVRIKEIQEA 237
Query: 216 PTCAL-ASDEVVQIT--------GEVDTVRKALKLISHQLLDN--------SPRDHESIP 258
L ASD + ++ G D V A + L + + + S
Sbjct: 238 SGARLNASDSYLPLSTERSLVVLGVADAVHIATYYVGSTLFEQLTERFGGPAASAYASRS 297
Query: 259 GNPTG------PSHP----------LPDHSVSSQGAPYATGHRDVADIHLPMPP-----S 297
G P G P+H LP H +P G+ V P P +
Sbjct: 298 GGPAGVVPGAMPNHTVKDRHLTNSQLPLHITGGHASPAVGGYGGVG----PQQPQQAGHA 353
Query: 298 IPKFH-ESGVLDRPKPSP---EILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVM 353
+P+ H +G +P P + LT ++ ++ VG +IGKGGA I ++Q +G IK+
Sbjct: 354 VPQPHGATGPQGQPMPGAIPGQPLTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKIN 413
Query: 354 EAVSGTEDRLIVISGPA 370
E + +RL+ I+G A
Sbjct: 414 EPQDNSNERLVTITGTA 430
>gi|296420990|ref|XP_002840050.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636260|emb|CAZ84241.1| unnamed protein product [Tuber melanosporum]
Length = 386
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 146/357 (40%), Gaps = 51/357 (14%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT R + + G +IGK G + L++ETG V + V+G DR++ ++GP
Sbjct: 52 LTLRAIVSSKEAGVIIGKAGKNVADLREETGVKAGVSKVVTGIPDRVLTVTGPL------ 105
Query: 377 SAPQDAVLRVQTRIARAIPDNREQTVMT---------RLLVASNQIGCLLGKGGSIIAEM 427
D V + +++ + D+ T+ RLL++ NQ+G ++G+ G I +
Sbjct: 106 ----DGVAKAYAMVSQTLLDSPPSTIGGGPPPGPGTLRLLISHNQMGTIIGRQGLKIKHI 161
Query: 428 RKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSIN 487
+ +SG + K+ +P+ E VV + G+ EA++ A+++I L + R +
Sbjct: 162 QDVSGTRM-TAAKEMLPQST---ERVVDVAGDPEAIRTAIWEIGKCLVDDWQRGTGTVL- 216
Query: 488 RPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAF 547
NP SP S S GM + G S D GG + + A
Sbjct: 217 --YNPAVR---SPGGS-------SSVGMGNGMGGS----DRYGGERGNTRSYARTGNGAD 260
Query: 548 MHHIHRPGMPPHMPDMKPWGPQGLMEVGG----PMGFPDFVGPPHRRVPVVVPRSLVPII 603
PP+ P G PM D G + + +P +V I
Sbjct: 261 FS----DSSPPYRRHDGPSGRPSDRSPSSSNTQPMHTDD--GEEIQTQNISIPADMVGCI 314
Query: 604 QGEDGACLKQIRQISDAKITITDPKPGAT-ETVIIISGTPEQTHAAQSLIQAFVMSE 659
G G ++ IR+ S A+I+I G T E + I G+ A L+ + +E
Sbjct: 315 IGRGGTKIQDIRRSSGARISIAKTPHGDTGERMFTIMGSASSNEKALYLLYENLEAE 371
>gi|302792551|ref|XP_002978041.1| hypothetical protein SELMODRAFT_108378 [Selaginella moellendorffii]
gi|300154062|gb|EFJ20698.1| hypothetical protein SELMODRAFT_108378 [Selaginella moellendorffii]
Length = 324
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 139/344 (40%), Gaps = 79/344 (22%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVM---EAVSGTEDRLIVISGPAHPDDR 375
R L + G VIGKGG+ I + ++G I++ E GT DR+ V+SG
Sbjct: 17 LRFLVTNTAAGSVIGKGGSTISDFQAQSGARIQLSRNHEYFPGTSDRVAVLSG------- 69
Query: 376 ISAPQDAVLRVQTRIARAIPDNRE---QTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSG 432
+ D + Q I++ I D+ + +++ +LLV G ++GKGGS I + + S
Sbjct: 70 --SLADVLTAFQLIISKIIKDDNQDDTKSIQVKLLVPKTVCGAIIGKGGSNIKKFVEDSQ 127
Query: 433 AYIRILGKDQ-IPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLN 491
A I++ +DQ +P + +V I G + + +A+ I T+L
Sbjct: 128 ASIKLSSQDQLLPGVI---DRIVTIGGNVDQIIKAVTLILTKLTEE-------------- 170
Query: 492 PTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHI 551
S + S P +Y GP+ V +H S + ++
Sbjct: 171 -------SSYT-----ETTSTPLVYPGTGPTPFIVRCV--------YHA----SPGLQNL 206
Query: 552 HRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACL 611
R G P MP +VG V + +P + I G G L
Sbjct: 207 RRNGPGPPMP-------------------VAYVGALTSSVTIGIPDEHIGFILGRAGKTL 247
Query: 612 KQIRQISDAKITITDPKPGATET---VIIISGTPEQTHAAQSLI 652
++++Q S AKI ++D T T + + G+ E AAQ L+
Sbjct: 248 QELQQSSGAKIKVSDRGDFVTGTEYRKVTMIGSGEAIQAAQFLL 291
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 116/264 (43%), Gaps = 51/264 (19%)
Query: 156 VQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI--D 213
V A L+ ++++ + +Q++TKS + ++LLV T G ++GKGG IK+ D
Sbjct: 74 VLTAFQLIISKIIKDD------NQDDTKSIQ--VKLLVPKTVCGAIIGKGGSNIKKFVED 125
Query: 214 KLPTCALAS---------DEVVQITGEVDTVRKALKLISHQLLDNSPRDHES-----IPG 259
+ L+S D +V I G VD + KA+ LI +L + S + PG
Sbjct: 126 SQASIKLSSQDQLLPGVIDRIVTIGGNVDQIIKAVTLILTKLTEESSYTETTSTPLVYPG 185
Query: 260 NPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTF 319
TGP+ P V R+ P PP +P + + +
Sbjct: 186 --TGPT-PFIVRCVYHASPGLQNLRRNG-----PGPP-MPVAYVGALTS---------SV 227
Query: 320 RLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA---VSGTEDRLIVISGPAHPDDRI 376
+ DE +G ++G+ G ++ L+Q +G IKV + V+GTE R + + G
Sbjct: 228 TIGIPDEHIGFILGRAGKTLQELQQSSGAKIKVSDRGDFVTGTEYRKVTMIGSGE----- 282
Query: 377 SAPQDAVLRVQTRIARAIPDNREQ 400
A Q A + ++ +++ + E+
Sbjct: 283 -AIQAAQFLLTQKVQQSLASDYER 305
>gi|196009850|ref|XP_002114790.1| hypothetical protein TRIADDRAFT_28388 [Trichoplax adhaerens]
gi|190582852|gb|EDV22924.1| hypothetical protein TRIADDRAFT_28388 [Trichoplax adhaerens]
Length = 360
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 80/367 (21%), Positives = 152/367 (41%), Gaps = 50/367 (13%)
Query: 309 RPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVM---EAVSGTEDRLIV 365
+ S + + +LL + G +IGKGG +I L+ ++ I++ + GT++R+IV
Sbjct: 14 KDNSSGDKVVLKLLIPNYAAGSIIGKGGDVINDLQNDSKTRIRLSHNNDTFPGTKERVIV 73
Query: 366 ISGPAHPD--------DRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLL 417
I+G +++S A +Q + + NR + + +++V + G ++
Sbjct: 74 ITGSIAGVRQVNRFILEKVSEEGKADKAIQYGV---LDKNRNRQL--KMIVPNAAAGVII 128
Query: 418 GKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHH 477
GKGGS I E++ SGA++++ Q + +E ++ + GEF A I +
Sbjct: 129 GKGGSNIKEIQDKSGAHVQV---SQKKAQYAIDERILTVTGEFNERLTAWELIIWKCLED 185
Query: 478 FFRDAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGP--PPP 535
N P V P + P ++SN+ + +A P
Sbjct: 186 IN-------NLPNTSVSYSHVEPAGTL--------PALHSNY---YGGGNANDRPMDSSA 227
Query: 536 GSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVV 595
S+ P+ + + M+ + P P G ++P V
Sbjct: 228 ASYDPYTSERYSPTQVTQDAQADRQYGMQSYPPTARNN------RPSSYGETVIKIP--V 279
Query: 596 PRSLVPIIQGEDGACLKQIRQISDAKITIT---DPKPGATETVIIISGTPEQTHAAQSLI 652
P S++ I G+ G + I+ IS A I ++ D PG + + ++GT + H A LI
Sbjct: 280 PDSIIGAILGKRGKVISDIQNISGAHIQVSQRGDYIPGTKDREVTVTGTNDAAHYADKLI 339
Query: 653 QAFVMSE 659
+ ++ E
Sbjct: 340 KGYLDKE 346
>gi|242764737|ref|XP_002340835.1| KH domain RNA binding protein [Talaromyces stipitatus ATCC 10500]
gi|218724031|gb|EED23448.1| KH domain RNA binding protein [Talaromyces stipitatus ATCC 10500]
Length = 461
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 150/382 (39%), Gaps = 53/382 (13%)
Query: 310 PKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGP 369
P+ + R + + IGKGG + ++Q +G V + G +R++ +SG
Sbjct: 97 PQDESSWIHIRAVISSQEAATCIGKGGENVSKIRQLSGSKCTVSDYSRGAVERILTVSG- 155
Query: 370 AHPDDRISAPQDAVLRVQTRIARAIPDN--------REQTVMTRLLVASNQIGCLLGKGG 421
PQDAV + I R + + + +T RLL+ IG ++GKGG
Sbjct: 156 ---------PQDAVAKAFGLIIRTLNNEPLEAPSTAQSKTYPLRLLIPHILIGSIIGKGG 206
Query: 422 SIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRD 481
I E+++ SGA R+ D ++E VVL G +AV A + + L
Sbjct: 207 VRIREIQEASGA--RLNASDACLPLSTERSLVVL--GVADAVHIATYYVAVTLVEQLTER 262
Query: 482 ---------AFPSINRPLNPTFLDQVSPF-PSFIGRRELSPPGMYSNFGPSFHKFDAVGG 531
A S QV P+ P G + P + ++ P ++ G
Sbjct: 263 FGGPAASAYATRSGGPAGVVPGGMQVVPYVPQPAGGQYGHPDSVRRHY-PQNNRP----G 317
Query: 532 PPPPGSFHPHDDHSAFMHHIHRP-------------GMPPHMPDMKPWG-PQGLMEVGGP 577
P P G+ + H +A P G PH P P+G P G
Sbjct: 318 PGPYGAPYAHGGPAAQAPVAQPPLHYGGGAARAPYAGAGPHQP--APYGAPHAQPHGAGA 375
Query: 578 MGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVII 637
V + +P +V I G+ G + +IR +S + I I +P+ + E ++
Sbjct: 376 QPLAGVVSSQPITQQIYIPNDMVGAIIGKGGTKINEIRHLSGSVIKINEPQENSNERLVT 435
Query: 638 ISGTPEQTHAAQSLIQAFVMSE 659
I+GT E A ++ A + SE
Sbjct: 436 ITGTQECNQMALYMLYARLESE 457
Score = 42.4 bits (98), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 8/94 (8%)
Query: 278 APYATGHRDVADIHLPMPPSIPKFHESGVLDRPKP---SPEILTFRLLCHDERVGGVIGK 334
APYA A H P P P G +P S + +T ++ ++ VG +IGK
Sbjct: 350 APYAG-----AGPHQPAPYGAPHAQPHGAGAQPLAGVVSSQPITQQIYIPNDMVGAIIGK 404
Query: 335 GGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
GG I ++ +G IK+ E + +RL+ I+G
Sbjct: 405 GGTKINEIRHLSGSVIKINEPQENSNERLVTITG 438
>gi|405122865|gb|AFR97631.1| cytoplasmic protein [Cryptococcus neoformans var. grubii H99]
Length = 357
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 95/185 (51%), Gaps = 24/185 (12%)
Query: 309 RPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
+P P P+ ++ R L + +IG+GGA + +++++ + V E++ G +R++ +SG
Sbjct: 72 KPDPGPQQISMRSLIVTQDASIIIGRGGAHVNEIREKSSARVTVSESIPGNPERILNVSG 131
Query: 369 PAHPDDRISAPQDAVLRVQTRIARAIPDN--------REQTVMTRLLVASNQIGCLLGKG 420
P DAV + I R I D + V + ++ ++++G ++GKG
Sbjct: 132 PL----------DAVAKAFGLIVRRINDEPFDVPSVPGSRAVTIKFIIPNSRMGSVIGKG 181
Query: 421 GSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFR 480
GS I E+++ SGA + + +P E V+ ++G +AV A++ I T L ++
Sbjct: 182 GSKIKEIQEASGARLN-ASEAMLP---GSTERVLSVSGVADAVHIAVYYIGTILLE--YQ 235
Query: 481 DAFPS 485
D +P+
Sbjct: 236 DRYPA 240
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/319 (20%), Positives = 126/319 (39%), Gaps = 85/319 (26%)
Query: 186 KFVLRLLVLSTQVGCLLGKGGCVIKQIDKLPTCALASDE--------VVQITGEVDTVRK 237
+ +R L+++ ++G+GG + +I + + + E ++ ++G +D V K
Sbjct: 79 QISMRSLIVTQDASIIIGRGGAHVNEIREKSSARVTVSESIPGNPERILNVSGPLDAVAK 138
Query: 238 ALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPS 297
A LI + +++ P D P G R V
Sbjct: 139 AFGLIVRR-INDEPFD------------------------VPSVPGSRAV---------- 163
Query: 298 IPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA-V 356
T + + + R+G VIGKGG+ I+ +++ +G + EA +
Sbjct: 164 --------------------TIKFIIPNSRMGSVIGKGGSKIKEIQEASGARLNASEAML 203
Query: 357 SGTEDRLIVISGPAHP---------------DDRISAPQDAVLR-VQTRIARAIPDNREQ 400
G+ +R++ +SG A DR A + Q+R A +
Sbjct: 204 PGSTERVLSVSGVADAVHIAVYYIGTILLEYQDRYPANATGSYKQSQSRGPPANSNAPPP 263
Query: 401 TVMT--RLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILG-KDQIPKCASEN--EEVVL 455
M ++ + + +G ++G+GGS I E+R S IR+ +P A+ N E +V
Sbjct: 264 PGMQTQQIFIPNALVGAIIGRGGSKINEIRSQSSCQIRVTDPGTTVPGGAAANPEERLVT 323
Query: 456 INGEFEAVQEALFQITTRL 474
I G + + A+ + +R+
Sbjct: 324 ITGYPDNINAAVALLYSRV 342
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 109/269 (40%), Gaps = 60/269 (22%)
Query: 147 LNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSKFV-LRLLVLSTQVGCLLGKG 205
LN V KA L+ R+ + E D + S+ V ++ ++ ++++G ++GKG
Sbjct: 127 LNVSGPLDAVAKAFGLIVRRIND-----EPFDVPSVPGSRAVTIKFIIPNSRMGSVIGKG 181
Query: 206 GCVIKQIDKLPTCALASDE---------VVQITGEVDTVRKALKLISHQLLDNSPRDHES 256
G IK+I + L + E V+ ++G D V A+ I LL+ R
Sbjct: 182 GSKIKEIQEASGARLNASEAMLPGSTERVLSVSGVADAVHIAVYYIGTILLEYQDR---- 237
Query: 257 IPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEI 316
P N TG S+G P + +
Sbjct: 238 YPANATGSY-----KQSQSRGPPANSNAPPPPGMQ------------------------- 267
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVME--------AVSGTEDRLIVISG 368
T ++ + VG +IG+GG+ I ++ ++ C I+V + A + E+RL+ I+G
Sbjct: 268 -TQQIFIPNALVGAIIGRGGSKINEIRSQSSCQIRVTDPGTTVPGGAAANPEERLVTITG 326
Query: 369 PAHPDDRISAPQDAVLRVQTRIARAIPDN 397
+PD+ +A RV+ A+ + N
Sbjct: 327 --YPDNINAAVALLYSRVEAERAKLVEQN 353
Score = 38.9 bits (89), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 8/75 (10%)
Query: 593 VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPK---PGAT-----ETVIIISGTPEQ 644
+ +P +LV I G G+ + +IR S +I +TDP PG E ++ I+G P+
Sbjct: 271 IFIPNALVGAIIGRGGSKINEIRSQSSCQIRVTDPGTTVPGGAAANPEERLVTITGYPDN 330
Query: 645 THAAQSLIQAFVMSE 659
+AA +L+ + V +E
Sbjct: 331 INAAVALLYSRVEAE 345
>gi|406866101|gb|EKD19141.1| KH domain RNA-binding protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 372
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 82/360 (22%), Positives = 143/360 (39%), Gaps = 64/360 (17%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT R + + G +IGK G + L+ ETG V + V G DR++ I+G
Sbjct: 49 LTLRAIVSSKEAGVIIGKAGKNVADLRDETGAKAGVSKVVQGVHDRVLTIAGGC------ 102
Query: 377 SAPQDAVLRVQTRIARAIPDNREQTVM-----------TRLLVASNQIGCLLGKGGSIIA 425
+A+ + +ARA+ + Q M +LL++ NQ+G ++G+ G I
Sbjct: 103 ----EAISKAYAIVARALLEGAPQMGMGGVVSTSGTHPIKLLISHNQMGTIIGRQGLKIK 158
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPS 485
++ SG + + K+ +P+ E +V I G E +Q+A+++I L + R
Sbjct: 159 HIQDASGVRM-VAQKEMLPQST---ERIVEIQGTPEGIQKAIWEICKCLIDDWQRGTGTV 214
Query: 486 INRPLNPTFLDQVSPFPSFIG-----RRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHP 540
+ P+ T G SP M + G F + P +++
Sbjct: 215 LYNPVVRTQPGGGPGMGQGGGGNGRDNYNSSPRVMRTGNGNDFSE-------NAPRTYNS 267
Query: 541 HDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLV 600
+S + G P H D G ++ + +P +V
Sbjct: 268 RRSNS----DAGQRGPPTH----------------------DENGEEYQTQNISIPSDMV 301
Query: 601 PIIQGEDGACLKQIRQISDAKITITD-PKPGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
I G G+ + +IR+ S A+I+I P E + I GT + AA L+ + +E
Sbjct: 302 GCIIGRAGSKISEIRKSSGARISIAKAPHDDTGERMFTIMGTTKANEAALYLLYENLEAE 361
>gi|85111179|ref|XP_963814.1| hypothetical protein NCU09237 [Neurospora crassa OR74A]
gi|28925551|gb|EAA34578.1| hypothetical protein NCU09237 [Neurospora crassa OR74A]
gi|38566984|emb|CAE76284.1| related to hnRNP protein E2 [Neurospora crassa]
Length = 489
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 141/350 (40%), Gaps = 46/350 (13%)
Query: 331 VIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRI 390
+IGKGG + +++ + V + G +R++ +SG D ++ ++R
Sbjct: 139 IIGKGGENVSKIREMSNAKCTVSDYQKGAVERILTVSGVV---DAVAKAFGLIIRTLNNE 195
Query: 391 ARAIPDN-REQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASE 449
A P N +T RLL+ IG ++GKGG+ I E+++ SGA R+ D ++E
Sbjct: 196 PLAEPSNTHSKTYPLRLLIPHVLIGSIIGKGGARIKEIQEASGA--RLNASDSCLPLSTE 253
Query: 450 NEEVVLINGEFEAVQEALFQITTRLRHHF-------------FRDAFPSINRPLNPTFLD 496
VV+ G +AV A + + + L R P+ + P +
Sbjct: 254 RSLVVM--GVADAVHIATYYVGSTLLEQLNERFGGPAASAYATRSGGPAASIPGGLQVVP 311
Query: 497 QV-SPFPSFIGRRELSPPGMYSNFGP---SFHKFDAVGGPPPPGSFHPHDDHSAF----- 547
V P G R+ N GP S H P P G+ HP + A
Sbjct: 312 YVPQPAGGNFGNRDY----YQRNRGPDPRSHHGMPPSQYPAPYGAPHPAQPNPAVPMHYG 367
Query: 548 -----MHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPI 602
+ P + PH+ P GP G P V + +P +V
Sbjct: 368 AHAAGGYGAAAPHVAPHVGHAGP-----APHAAGPHGAP--VAGAALTQQIYIPNDMVGA 420
Query: 603 IQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLI 652
I G+ G + +IRQIS + I I +P+ + E ++ I+GT E A L+
Sbjct: 421 IIGKGGQKINEIRQISGSVIKINEPQDNSNERLVTITGTEECNRMALYLL 470
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 13/102 (12%)
Query: 156 VQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKL 215
V KA L+ R + EP +A+ NT S + LRLL+ +G ++GKGG IK+I +
Sbjct: 181 VAKAFGLII-RTLNNEP---LAEPSNTHSKTYPLRLLIPHVLIGSIIGKGGARIKEIQEA 236
Query: 216 PTCAL-ASDEVVQIT--------GEVDTVRKALKLISHQLLD 248
L ASD + ++ G D V A + LL+
Sbjct: 237 SGARLNASDSCLPLSTERSLVVMGVADAVHIATYYVGSTLLE 278
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 32/52 (61%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
LT ++ ++ VG +IGKGG I ++Q +G IK+ E + +RL+ I+G
Sbjct: 407 LTQQIYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQDNSNERLVTITG 458
Score = 38.9 bits (89), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 49 RVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSEN- 107
++ P + +IGK G+ +++I Q +G I++ E S+ERLV I ++ +
Sbjct: 410 QIYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQDNSNERLVTITGTEECNRMALYL 469
Query: 108 LEASIERSENNGRE 121
L + +NNGR+
Sbjct: 470 LYQRLGELQNNGRD 483
>gi|449272169|gb|EMC82214.1| Heterogeneous nuclear ribonucleoprotein K [Columba livia]
Length = 422
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 98/416 (23%), Positives = 153/416 (36%), Gaps = 86/416 (20%)
Query: 301 FHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTE 360
E R + + E++ R+L + G VIGKGG I++L+ + + V ++
Sbjct: 24 MEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDS----- 78
Query: 361 DRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQT--------VMTRLLVASNQ 412
SGP +RI + + + + + IP E RLL+ +
Sbjct: 79 ------SGP----ERILSISADIETIGEILKKIIPTLEEYQHYKGSDFDCELRLLIHQSL 128
Query: 413 IGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITT 472
G ++G G+ I E+R+ + I++ + C + VVLI G+ + V E + I
Sbjct: 129 AGGIIGVKGAKIKELRENTQTTIKLFQE----CCPHSTDRVVLIGGKPDRVVECIKIILD 184
Query: 473 RLRHHFFRDAFPSINRPLNPTFLDQVSPFPSF---IGRRELSPPGMYSNFGPSFHKF-DA 528
+ +P +P F D+ + F R P G F +
Sbjct: 185 LISES----PIKGRAQPYDPNFYDETYDYGGFTMMFDDRRGRPVGFPMRGRGGFDRMPPG 240
Query: 529 VGGPPPPGSFHPHDDHSA----------------------------------FMHHIH-- 552
GG P P S +DD S M +
Sbjct: 241 RGGRPMPPSRRDYDDMSPRRGPPPPPPGRGGRGGSRARNLPLPPPPPPRGGDLMSYDRRG 300
Query: 553 RPG-------MPPHMPDMKPWGPQGLMEVG--------GPMGFPDFVGPPHRRVPVVVPR 597
RPG M H+ P L E G G G +G P V +P+
Sbjct: 301 RPGDRYDGMMMQCHVDACDDMQPPELFEGGSGYDYSYAGGRGSYGDLGGPIITTQVTIPK 360
Query: 598 SLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQ 653
L I G+ G +KQIR S A I I +P G+ + +I I+GT +Q AQ L+Q
Sbjct: 361 DLNLSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQ 416
Score = 38.9 bits (89), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 34/49 (69%)
Query: 60 VIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENL 108
+IGK G+ + QI ++G +I+++E + GS++R++ I + ++ + ++ L
Sbjct: 366 IIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYL 414
>gi|354490712|ref|XP_003507500.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
[Cricetulus griseus]
Length = 731
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 106/471 (22%), Positives = 189/471 (40%), Gaps = 112/471 (23%)
Query: 39 SKSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEAS 98
SK P + R+L P + +IGK+G + I++ T I
Sbjct: 341 SKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKI------------------- 381
Query: 99 DNKKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQK 158
+ R EN G E + L++ + S K
Sbjct: 382 ------------DVHRKENTGAAEKPITI-------------------LSTPEGASAACK 410
Query: 159 ALLLVFERMVEVEPETEVADQENTKSSKFV-LRLLVLSTQVGCLLGKGGCVIKQIDK--- 214
++L + + + ++TK ++ V L++L + VG L+GK G +K+I++
Sbjct: 411 SILEIMHK-----------EAQDTKLTEEVPLKILAHNNFVGRLIGKEGRNLKKIEQDTD 459
Query: 215 -------LPTCALASDE-VVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSH 266
L L + E + + G V+T +A + I ++ ++ D S+ +H
Sbjct: 460 TKITISPLQELTLYNPERTITVKGNVETCARAEEEIMKKIRESYENDIASM----NLQAH 515
Query: 267 PLPDHSVSSQGA--PYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCH 324
+P ++++ G P + + M P P+F +S E T L
Sbjct: 516 LIPGLNLNALGLFPPTSGMPPPTSGPPSTMTPPYPQFEQS----------ETETVHLFIP 565
Query: 325 DERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRISAPQDAV 383
VG +IGK G I+ L + G IK+ A + + R+++I+GP +A
Sbjct: 566 ALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPP----------EAQ 615
Query: 384 LRVQTRIARAIPD------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRI 437
+ Q RI I + E + + V S G ++GKGG + E++ LS A + +
Sbjct: 616 FKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEV-V 674
Query: 438 LGKDQIPKCASENEEVVLINGEFEAVQEA---LFQITTRLRHHFFRDAFPS 485
+ +DQ P N+ VV I G F A Q A + +I ++++ H + A S
Sbjct: 675 VPRDQTPD--ENNQVVVKITGHFYACQVAQRKIQEILSQVKQHQQQKALQS 723
>gi|321258532|ref|XP_003193987.1| telomere length regulating RNA binding protein; Pbp2p [Cryptococcus
gattii WM276]
gi|317460457|gb|ADV22200.1| Telomere length regulating RNA binding protein, putative; Pbp2p
[Cryptococcus gattii WM276]
Length = 357
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 95/185 (51%), Gaps = 24/185 (12%)
Query: 309 RPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
+P P P+ ++ R L + +IG+GGA + +++++ + V E++ G +R++ +SG
Sbjct: 72 KPDPGPQQISMRSLIVTQDASIIIGRGGAHVNEIREKSSARVTVSESIPGNPERILNVSG 131
Query: 369 PAHPDDRISAPQDAVLRVQTRIARAIPDN--------REQTVMTRLLVASNQIGCLLGKG 420
P DAV + I R I D + V + ++ ++++G ++GKG
Sbjct: 132 PL----------DAVAKAFGLIVRRINDEPFDVPSVPGSRAVTIKFIIPNSRMGSVIGKG 181
Query: 421 GSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFR 480
GS I E+++ SGA + + +P E V+ ++G +AV A++ I T L ++
Sbjct: 182 GSKIKEIQEASGARLN-ASEAMLP---GSTERVLSVSGVADAVHIAVYYIGTILLE--YQ 235
Query: 481 DAFPS 485
D +P+
Sbjct: 236 DRYPA 240
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 65/319 (20%), Positives = 125/319 (39%), Gaps = 85/319 (26%)
Query: 186 KFVLRLLVLSTQVGCLLGKGGCVIKQIDKLPTCALASDE--------VVQITGEVDTVRK 237
+ +R L+++ ++G+GG + +I + + + E ++ ++G +D V K
Sbjct: 79 QISMRSLIVTQDASIIIGRGGAHVNEIREKSSARVTVSESIPGNPERILNVSGPLDAVAK 138
Query: 238 ALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPS 297
A LI + +++ P D P G R V
Sbjct: 139 AFGLIVRR-INDEPFD------------------------VPSVPGSRAV---------- 163
Query: 298 IPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA-V 356
T + + + R+G VIGKGG+ I+ +++ +G + EA +
Sbjct: 164 --------------------TIKFIIPNSRMGSVIGKGGSKIKEIQEASGARLNASEAML 203
Query: 357 SGTEDRLIVISGPAHP---------------DDRISAPQDAVLR-VQTRIARAIPDNREQ 400
G+ +R++ +SG A DR A R Q+R +
Sbjct: 204 PGSTERVLSVSGVADAVHIAVYYIGTILLEYQDRYPANATGSYRQSQSRGPPPNSNAPPP 263
Query: 401 TVMT--RLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILG-KDQIPKCASEN--EEVVL 455
M ++ + + +G ++G+GGS I E+R S IR+ +P A+ N E +V
Sbjct: 264 PGMQTQQIFIPNALVGAIIGRGGSKINEIRSQSSCQIRVTDPGTTVPGGAAANPEERLVT 323
Query: 456 INGEFEAVQEALFQITTRL 474
I G + + A+ + +R+
Sbjct: 324 ITGYPDNINAAVALLYSRV 342
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 109/269 (40%), Gaps = 60/269 (22%)
Query: 147 LNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSKFV-LRLLVLSTQVGCLLGKG 205
LN V KA L+ R+ + E D + S+ V ++ ++ ++++G ++GKG
Sbjct: 127 LNVSGPLDAVAKAFGLIVRRIND-----EPFDVPSVPGSRAVTIKFIIPNSRMGSVIGKG 181
Query: 206 GCVIKQIDKLPTCALASDE---------VVQITGEVDTVRKALKLISHQLLDNSPRDHES 256
G IK+I + L + E V+ ++G D V A+ I LL+ R
Sbjct: 182 GSKIKEIQEASGARLNASEAMLPGSTERVLSVSGVADAVHIAVYYIGTILLEYQDR---- 237
Query: 257 IPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEI 316
P N TG S+G P + +
Sbjct: 238 YPANATGSY-----RQSQSRGPPPNSNAPPPPGMQ------------------------- 267
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVME--------AVSGTEDRLIVISG 368
T ++ + VG +IG+GG+ I ++ ++ C I+V + A + E+RL+ I+G
Sbjct: 268 -TQQIFIPNALVGAIIGRGGSKINEIRSQSSCQIRVTDPGTTVPGGAAANPEERLVTITG 326
Query: 369 PAHPDDRISAPQDAVLRVQTRIARAIPDN 397
+PD+ +A RV+ A+ + N
Sbjct: 327 --YPDNINAAVALLYSRVEAERAKLVEQN 353
Score = 38.9 bits (89), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 8/75 (10%)
Query: 593 VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPK---PGAT-----ETVIIISGTPEQ 644
+ +P +LV I G G+ + +IR S +I +TDP PG E ++ I+G P+
Sbjct: 271 IFIPNALVGAIIGRGGSKINEIRSQSSCQIRVTDPGTTVPGGAAANPEERLVTITGYPDN 330
Query: 645 THAAQSLIQAFVMSE 659
+AA +L+ + V +E
Sbjct: 331 INAAVALLYSRVEAE 345
>gi|118486946|gb|ABK95306.1| unknown [Populus trichocarpa]
Length = 313
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 90/187 (48%), Gaps = 18/187 (9%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV---MEAVSGTEDRLIVISGPAHPDDR 375
+LL + G VIGKGGA I + ++G I++ E GT DR+I+ISG DD
Sbjct: 37 IKLLVSNAAAGSVIGKGGATITDFQSQSGARIQLSKNYEFFPGTSDRIILISGGI--DDA 94
Query: 376 ISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYI 435
+ A + + ++ + I D+ E + RL+V +N G ++GKGGSII + S A I
Sbjct: 95 LKALELIIAKLLSEIPTEDGDDAEPRMRVRLVVPNNACGSIIGKGGSIIKSFIEESHAGI 154
Query: 436 RILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRH--HFFRD---------AFP 484
+I D + +V I G E A+ I ++L H+ ++ A+
Sbjct: 155 KISPLD--TDFLGLTDRLVAITGTLEEQMHAIDLILSKLTDDTHYLQNMHAPLSYAAAYN 212
Query: 485 SINRPLN 491
S N LN
Sbjct: 213 STNHGLN 219
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 106/244 (43%), Gaps = 53/244 (21%)
Query: 158 KALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIK------- 210
KAL L+ +++ P + D E + +RL+V + G ++GKGG +IK
Sbjct: 96 KALELIIAKLLSEIPTEDGDDAE----PRMRVRLVVPNNACGSIIGKGGSIIKSFIEESH 151
Query: 211 ---QIDKLPTCALA-SDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSH 266
+I L T L +D +V ITG ++ A+ LI +L D++ H
Sbjct: 152 AGIKISPLDTDFLGLTDRLVAITGTLEEQMHAIDLILSKLTDDT---------------H 196
Query: 267 PLPD-HSVSSQGAPY-ATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCH 324
L + H+ S A Y +T H + +GV + + +
Sbjct: 197 YLQNMHAPLSYAAAYNSTNH---------------GLNGAGVKFQHNKEDRTNSVTIGVA 241
Query: 325 DERVGGVIGKGGAIIRSLKQETGCDIKVMEA---VSGTEDRLIVISGPAHPDDRISAPQD 381
DE +G V+G+GG I + Q +G IK+ + +SGT DR I I+G I A +D
Sbjct: 242 DEHIGLVVGRGGRNIMEISQNSGARIKISDRGDFMSGTNDRKITITGSQRA---IHAAED 298
Query: 382 AVLR 385
+++
Sbjct: 299 MIMQ 302
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 115/294 (39%), Gaps = 37/294 (12%)
Query: 396 DNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVL 455
D E+ +LLV++ G ++GKGG+ I + + SGA I++ + S + ++L
Sbjct: 29 DAVEKPTYIKLLVSNAAAGSVIGKGGATITDFQSQSGARIQLSKNYEFFPGTS--DRIIL 86
Query: 456 INGEFEAVQEALFQITTRLRHHF----FRDAFPSI-------NRPLNPTFLDQVSPFPSF 504
I+G + +AL I +L DA P + N S SF
Sbjct: 87 ISGGIDDALKALELIIAKLLSEIPTEDGDDAEPRMRVRLVVPNNACGSIIGKGGSIIKSF 146
Query: 505 IGRR----ELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHD-------DHSAFMHHIHR 553
I ++SP + ++F + A+ G H D D + ++ ++H
Sbjct: 147 IEESHAGIKISP--LDTDFLGLTDRLVAITGTLEE-QMHAIDLILSKLTDDTHYLQNMHA 203
Query: 554 PGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQ 613
P + G G + F V + V + ++ G G + +
Sbjct: 204 PLSYAAAYNSTNHGLN-----GAGVKFQHNKEDRTNSVTIGVADEHIGLVVGRGGRNIME 258
Query: 614 IRQISDAKITITDP---KPGATETVIIISGTPEQTHAAQSLIQAFV--MSETET 662
I Q S A+I I+D G + I I+G+ HAA+ +I V SE ET
Sbjct: 259 ISQNSGARIKISDRGDFMSGTNDRKITITGSQRAIHAAEDMIMQKVSYASERET 312
>gi|149031922|gb|EDL86834.1| rCG50739, isoform CRA_c [Rattus norvegicus]
Length = 317
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 89/157 (56%), Gaps = 11/157 (7%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTNAIFK- 70
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I+ ++ ++ + V RL+V ++Q G L+GKGG I E+R+ +GA
Sbjct: 71 -AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
+++ G D +P + E + I G +++ E + QI
Sbjct: 130 QVQVAG-DMLP---NSTERAITIAGIPQSIIECVKQI 162
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 110/240 (45%), Gaps = 33/240 (13%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T +S+ LRL+V ++Q G L+GKGGC IK
Sbjct: 65 TNAIFKAFAMIIDKL---EEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIP 258
+I D LP +++ + I G ++ + +K I +L++ P+ +IP
Sbjct: 122 EIRESTGAQVQVAGDMLPN---STERAITIAGIPQSIIECVKQICVVMLESPPKG-VTIP 177
Query: 259 GNPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFH--ES------GVLDRP 310
P S P+ + + G + H PM F ES G
Sbjct: 178 YRPKPSSSPV----IFAGGQLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGL 233
Query: 311 KPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPA 370
S + + L ++ +G +IG+ GA I ++Q +G IK+ V G+ DR + I+G A
Sbjct: 234 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSA 293
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%)
Query: 593 VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLI 652
+ +P L+ I G GA + +IRQ+S A+I I +P G+T+ + I+G+ AQ LI
Sbjct: 244 LTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLI 303
Query: 653 QAFVMSET 660
+ SET
Sbjct: 304 NVRLSSET 311
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 396 DNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVL 455
D QT L + ++ IGC++G+ G+ I E+R++SGA I+I P S + +V
Sbjct: 234 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN----PVEGSTDRQVT- 288
Query: 456 INGEFEAVQEALFQITTRL 474
I G ++ A + I RL
Sbjct: 289 ITGSAASISLAQYLINVRL 307
>gi|41055221|ref|NP_957486.1| poly(rC)-binding protein 2 [Danio rerio]
gi|28279638|gb|AAH45508.1| Poly(rC) binding protein 2 [Danio rerio]
gi|37681899|gb|AAQ97827.1| poly(rC) binding protein 2 [Danio rerio]
gi|42744604|gb|AAH66603.1| Pcbp2 protein [Danio rerio]
Length = 318
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 111/242 (45%), Gaps = 40/242 (16%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI 212
T+ + KA ++ E++ E + + +++ T LR++V ++Q G L+GKGGC IK+I
Sbjct: 65 TTAIFKAFSMIIEKLEE-DISSSMSNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEI 123
Query: 213 ------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGN 260
D LP +++ + I G ++ + +K I +L++ P+ +IP
Sbjct: 124 RESTGAQVQVAGDMLPN---STERAITIAGTPLSIIECVKQICVVMLESPPKGV-TIPYR 179
Query: 261 PTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKP-------- 312
P P+ + + G YA V H P + K H+ + P P
Sbjct: 180 PKPSGSPV----IFAGGQAYA-----VQGQHAIPQPDLTKLHQLAMQQSPFPLAPSSQGF 230
Query: 313 ------SPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVI 366
S + + L ++ +G +IG+ GA I ++Q +G IK+ V G+ DR + I
Sbjct: 231 TAGMDASAQTGSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSSDRQVTI 290
Query: 367 SG 368
+G
Sbjct: 291 TG 292
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 87/157 (55%), Gaps = 11/157 (7%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTTAIFK- 70
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I+ ++ ++ + V R++V ++Q G L+GKGG I E+R+ +GA
Sbjct: 71 -AFSMIIEKLEEDISSSMSNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
+++ G D +P + E + I G ++ E + QI
Sbjct: 130 QVQVAG-DMLP---NSTERAITIAGTPLSIIECVKQI 162
Score = 47.0 bits (110), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 40/67 (59%)
Query: 593 VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLI 652
+ +P L+ I G GA + +IRQ+S A+I I +P G+++ + I+G+P A+ LI
Sbjct: 245 LTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSSDRQVTITGSPASISLAEYLI 304
Query: 653 QAFVMSE 659
A + SE
Sbjct: 305 NARLSSE 311
>gi|354475601|ref|XP_003500016.1| PREDICTED: poly(rC)-binding protein 2-like [Cricetulus griseus]
Length = 325
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 145/337 (43%), Gaps = 45/337 (13%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +I K G ++ +++E+G + + +R+I ++GP + +
Sbjct: 14 LTSRLLMHGKEVGSIIAKKGESVKKMREESGARTSISDG--NCPERIITLAGPTNAIFKA 71
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I+ ++ ++ + V RL+V ++Q G L+GKGG I E+R+ +GA
Sbjct: 72 FA--MIIDKLEEGISSSMTNSTAASRPPVALRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPT 493
+++ G D +P + E + I G +++ E + QI + + P P T
Sbjct: 130 QVQVAG-DMLP---NSTEWAITIAGIPQSLIECVKQICVVMLETLSQPPHP---HPKGLT 182
Query: 494 FLDQVSPFPS---FIGRRELSPPGMYSNFGPSFHKFDAVG----GPPPPGSFHPHDDHSA 546
+ P S F G ++ G S P + + GPP H
Sbjct: 183 ITYRPKPSSSLVIFAGGQDRYSTGSDSASFPHTTQSMCLNPDLEGPP----LELTKLHQL 238
Query: 547 FMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVP--VVVPRSLVPIIQ 604
+ H P G GF + + + + L+ I
Sbjct: 239 ALQQSHFP------------------MTHGNTGFSAGLDASAQTTSHELTISNDLIGCII 280
Query: 605 GEDGACLKQIRQISDAKITITDPKPGATETVIIISGT 641
G GA + +IRQ+S A+I +P G+T+ + I+G+
Sbjct: 281 GRQGAKINEIRQMSGAQIKTANPVEGSTDRQVTITGS 317
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 114/270 (42%), Gaps = 51/270 (18%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + +T +S+ LRL+V ++Q G L+GKGGC IK
Sbjct: 65 TNAIFKAFAMIIDKL---EEGISSSMTNSTAASRPPVALRLVVPASQCGSLIGKGGCKIK 121
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIP 258
+I D LP +++ + I G ++ + +K I +L+ + P
Sbjct: 122 EIRESTGAQVQVAGDMLPN---STEWAITIAGIPQSLIECVKQICVVMLETLSQPPHPHP 178
Query: 259 GNPTGPSHPLPDHSV---SSQGAPYATGHRDVADIH----------LPMPP-SIPKFHES 304
T P P S+ + Y+TG + H L PP + K H+
Sbjct: 179 KGLTITYRPKPSSSLVIFAGGQDRYSTGSDSASFPHTTQSMCLNPDLEGPPLELTKLHQL 238
Query: 305 GVLDRPKP--------------SPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDI 350
+ P S + + L ++ +G +IG+ GA I ++Q +G I
Sbjct: 239 ALQQSHFPMTHGNTGFSAGLDASAQTTSHELTISNDLIGCIIGRQGAKINEIRQMSGAQI 298
Query: 351 KVMEAVSGTEDRLIVISGPAHPDDRISAPQ 380
K V G+ DR + I+G A IS PQ
Sbjct: 299 KTANPVEGSTDRQVTITGSA---ASISLPQ 325
>gi|325093144|gb|EGC46454.1| KH domain RNA binding protein [Ajellomyces capsulatus H88]
Length = 499
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 143/362 (39%), Gaps = 44/362 (12%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISA 378
R + IGKGG + +++ +G V + G +R++ +SG
Sbjct: 139 IRAVISSAEAATCIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGM--------- 189
Query: 379 PQDAVLRVQTRIARAIPDN--------REQTVMTRLLVASNQIGCLLGKGGSIIAEMRKL 430
QDAV + I R + + + +T RLL+ IG ++GK G I E+++
Sbjct: 190 -QDAVAKAFGLIIRTLNNEPLEAPSTAQSKTYPLRLLIPHLLIGSIIGKSGVRIREIQEA 248
Query: 431 SGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRD--------- 481
SGA R+ D ++E V+L G +AV A + + L
Sbjct: 249 SGA--RLNASDSCLPLSTERTLVIL--GVADAVHIATYYVAVTLVEQLTERFGGPAASAY 304
Query: 482 AFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSF--- 538
A S QV P+ + P + P ++ + GG P
Sbjct: 305 ATRSGGAAGVVPGGMQVVPYVPQPAGGQYGHPDTFKRHQPPGNRVVSTGGYGVPYVHGQP 364
Query: 539 -HPHDDHSAFMH-HIHRPGMP---PHMPDMKPWG-PQGLMEVGGPMGFPDFVGPPHRRVP 592
P H A + RPG PH P P+G PQ GGP P P V
Sbjct: 365 GQPQMPHQALHYGSSSRPGYSGAGPHQP--APYGAPQPAPVHGGPSAQPAGGVVPGAPVT 422
Query: 593 --VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQS 650
+ +P +V I G+ GA + +IR +S + I I +P+ + E ++ I+GTPE A
Sbjct: 423 QQIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQDNSNERLVTITGTPECNQMALY 482
Query: 651 LI 652
++
Sbjct: 483 ML 484
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 5/73 (6%)
Query: 402 VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFE 461
V ++ + ++ +G ++GKGG+ I E+R LSG+ I+I P+ S NE +V I G E
Sbjct: 421 VTQQIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKI----NEPQDNS-NERLVTITGTPE 475
Query: 462 AVQEALFQITTRL 474
Q AL+ + +RL
Sbjct: 476 CNQMALYMLYSRL 488
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 32/52 (61%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
+T ++ ++ VG +IGKGGA I ++ +G IK+ E + +RL+ I+G
Sbjct: 421 VTQQIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQDNSNERLVTITG 472
>gi|358335626|dbj|GAA29562.2| RNA-binding protein Nova [Clonorchis sinensis]
Length = 673
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 88/167 (52%), Gaps = 21/167 (12%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA---VSGTEDRLIVISGP------ 369
F++L G +IGKGG I ++ +T +K+ +A GT +R+ +I G
Sbjct: 30 FKILVPSIAAGAIIGKGGEAITDIQNKTSAKVKMSKANDFYPGTTERVCLIVGTIDSILR 89
Query: 370 --AHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEM 427
+ ++I +++LR + R +P R + V ++LV ++ G ++GKGGS I E+
Sbjct: 90 VFQYISEKIYEKPESILRSTNKGGR-MPAERHKQV--KILVPNSTAGIIIGKGGSFIKEV 146
Query: 428 RKLSGAYIRILGKDQIPKCASENEEVVLINGE----FEAVQEALFQI 470
++ +G +I++ K + A E V + GE FEAV++ LF+I
Sbjct: 147 KESTGVFIQVSQKSKELNLA---ERCVTVAGELPQTFEAVKQLLFKI 190
>gi|430813652|emb|CCJ29027.1| unnamed protein product [Pneumocystis jirovecii]
Length = 383
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 136/349 (38%), Gaps = 67/349 (19%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
+T R L + G +IG+ G + L+ G V + V DR++ ISG
Sbjct: 72 VTLRALVSTKEAGIIIGRQGKNVAELRGANGIKAGVSKVVPNIHDRVLTISGSL------ 125
Query: 377 SAPQDAVLRVQTRIARAIPDN------------REQTVMTRLLVASNQIGCLLGKGGSII 424
D V + IA+A DN E RLL++ N +G ++G+ G I
Sbjct: 126 ----DGVSKAYAAIAQAFIDNPIGHSTNHASSSSEPQSSIRLLISHNMMGTIIGRQGLKI 181
Query: 425 AEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFP 484
++ LSGA + I K+ +P+ E +V + G ++Q A+++I L
Sbjct: 182 KHIQDLSGARM-IAFKEILPQST---ERIVEVQGVVSSIQTAIWEIGKCL--------ID 229
Query: 485 SINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDH 544
R + F + PS L P H+ +++ PG + +
Sbjct: 230 DWERGIGTVFYN-----PSLRLSSTLVPG----------HQGNSILSGAQPGHYLQYQRQ 274
Query: 545 SAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQ 604
S+ M++ MP H + P+ D R + +P +V I
Sbjct: 275 SSQMNYSRLGNMPSHFQE--------------PL---DTSNQDIRVQNISIPSDMVGCII 317
Query: 605 GEDGACLKQIRQISDAKITITD-PKPGATETVIIISGTPEQTHAAQSLI 652
G G+ + +IR+IS +KI+I P E + I GT A ++
Sbjct: 318 GRGGSKISEIRRISGSKISIAKAPHDETGERMFTIQGTASSNEKALYML 366
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 96/205 (46%), Gaps = 22/205 (10%)
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQIDKLPTCAL---------ASDEVVQITGEVDTVRKAL 239
+RLL+ +G ++G+ G IK I L + +++ +V++ G V +++ A+
Sbjct: 161 IRLLISHNMMGTIIGRQGLKIKHIQDLSGARMIAFKEILPQSTERIVEVQGVVSSIQTAI 220
Query: 240 KLISHQLLDNSPRDHESIPGNPTG--PSHPLPDH---SVSSQGAP--YATGHRDVADIHL 292
I L+D+ R ++ NP+ S +P H S+ S P Y R + ++
Sbjct: 221 WEIGKCLIDDWERGIGTVFYNPSLRLSSTLVPGHQGNSILSGAQPGHYLQYQRQSSQMNY 280
Query: 293 PMPPSIPK-FHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIK 351
++P F E LD + +I + + VG +IG+GG+ I +++ +G I
Sbjct: 281 SRLGNMPSHFQEP--LD--TSNQDIRVQNISIPSDMVGCIIGRGGSKISEIRRISGSKIS 336
Query: 352 VMEA-VSGTEDRLIVISGPAHPDDR 375
+ +A T +R+ I G A +++
Sbjct: 337 IAKAPHDETGERMFTIQGTASSNEK 361
>gi|148672030|gb|EDL03977.1| poly(rC) binding protein 2, isoform CRA_d [Mus musculus]
Length = 316
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 89/157 (56%), Gaps = 11/157 (7%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTNAIFK- 70
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I+ ++ ++ + V RL+V ++Q G L+GKGG I E+R+ +GA
Sbjct: 71 -AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
+++ G D +P + E + I G +++ E + QI
Sbjct: 130 QVQVAG-DMLP---NSTERAITIAGIPQSIIECVKQI 162
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 113/240 (47%), Gaps = 34/240 (14%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T +S+ LRL+V ++Q G L+GKGGC IK
Sbjct: 65 TNAIFKAFAMIIDKL---EEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIP 258
+I D LP +++ + I G ++ + +K I +L++ P+ +IP
Sbjct: 122 EIRESTGAQVQVAGDMLPN---STERAITIAGIPQSIIECVKQICVVMLESPPKG-VTIP 177
Query: 259 GNPTGPSHPL--------PDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRP 310
P S P+ H ++ Q + + H + + S P+ LD
Sbjct: 178 YRPKPSSSPVIFAGGQLTKLHQLAMQQSHFPMTHGNTG--FSGIESSSPEVKGYWGLD-- 233
Query: 311 KPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPA 370
S + + L ++ +G +IG+ GA I ++Q +G IK+ V G+ DR + I+G A
Sbjct: 234 -ASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSA 292
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%)
Query: 593 VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLI 652
+ +P L+ I G GA + +IRQ+S A+I I +P G+T+ + I+G+ AQ LI
Sbjct: 243 LTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLI 302
Query: 653 QAFVMSET 660
+ SET
Sbjct: 303 NVRLSSET 310
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 396 DNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVL 455
D QT L + ++ IGC++G+ G+ I E+R++SGA I+I P S + +V
Sbjct: 233 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN----PVEGSTDRQVT- 287
Query: 456 INGEFEAVQEALFQITTRL 474
I G ++ A + I RL
Sbjct: 288 ITGSAASISLAQYLINVRL 306
>gi|300796214|ref|NP_001179217.1| insulin-like growth factor 2 mRNA-binding protein 3 [Bos taurus]
gi|296488613|tpg|DAA30726.1| TPA: insulin-like growth factor 2 mRNA binding protein 3 [Bos
taurus]
Length = 580
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 114/479 (23%), Positives = 188/479 (39%), Gaps = 127/479 (26%)
Query: 39 SKSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEAS 98
SK P + R+L P + +IGK+G + I++ T I
Sbjct: 189 SKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKI------------------- 229
Query: 99 DNKKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQK 158
+ R EN G E S+ L++ + TS K
Sbjct: 230 ------------DVHRKENAGAAEKSITI-------------------LSTPEGTSAACK 258
Query: 159 ALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDK---- 214
++L + + E D + T+ + L++L + VG L+GK G +K+I++
Sbjct: 259 SILEIMHK--------EAQDIKFTE--EIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDT 308
Query: 215 ------LPTCALASDE-VVQITGEVDTVRKALKLISHQLLDNSPRDHES-------IPG- 259
L L + E + + G V+T KA + I ++ ++ D S IPG
Sbjct: 309 KITISPLQELTLYNPERTITVKGNVETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGL 368
Query: 260 --NPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEIL 317
N G P + G P A + P P+F + E
Sbjct: 369 NLNALGLFPPTSGMPPPTSGPPSA------------ITPPYPQFEQQS---------ETE 407
Query: 318 TFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRI 376
T L VG +IGK G I+ L + G IK+ A + + R+++I+GP
Sbjct: 408 TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPP------ 461
Query: 377 SAPQDAVLRVQTRIARAIPD------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKL 430
+A + Q RI I + E + + V S G ++GKGG + E++ L
Sbjct: 462 ----EAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNL 517
Query: 431 SGAYIRILGKDQIPKCASENEEVVL-INGEFEAVQEA---LFQITTRLRHHFFRDAFPS 485
S A + ++ +DQ P EN++VV+ I G F A Q A + +I T+++ H + A S
Sbjct: 518 SSAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVKQHQQQKALQS 572
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 138/361 (38%), Gaps = 84/361 (23%)
Query: 311 KPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV--MEAVSGTEDRLIVISG 368
K P L RLL + VG +IGK GA IR++ ++T I V E E + ++S
Sbjct: 190 KQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILST 249
Query: 369 PAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMR 428
P + SA ++L + + A+ I E + ++L +N +G L+GK G + ++
Sbjct: 250 P----EGTSAACKSILEIMHKEAQDIKFTEE--IPLKILAHNNFVGRLIGKEGRNLKKIE 303
Query: 429 KLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINR 488
+ + I I ++ E + + G E +A +I ++R + D S+N
Sbjct: 304 QDTDTKITISPLQEL--TLYNPERTITVKGNVETCAKAEEEIMKKIRESYEND-IASMN- 359
Query: 489 PLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFM 548
+ ++ P + +A+G PP
Sbjct: 360 --------------------------LQAHLIPGLN-LNALGLFPPTS------------ 380
Query: 549 HHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPH---------RRVPVVVPRSL 599
GMPP GP P + PP+ V + +P
Sbjct: 381 ------GMPP--------------PTSGP---PSAITPPYPQFEQQSETETVHLFIPALS 417
Query: 600 VPIIQGEDGACLKQIRQISDAKITITDPK-PGATETVIIISGTPEQTHAAQSLIQAFVMS 658
V I G+ G +KQ+ + + A I I + P A ++II+G PE AQ I +
Sbjct: 418 VGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFKAQGRIYGKIKE 477
Query: 659 E 659
E
Sbjct: 478 E 478
>gi|224116388|ref|XP_002317285.1| predicted protein [Populus trichocarpa]
gi|222860350|gb|EEE97897.1| predicted protein [Populus trichocarpa]
Length = 165
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 64/107 (59%), Gaps = 5/107 (4%)
Query: 381 DAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGK 440
+A+L +Q +I D + TV RLLV S IGC++GKGGS I E+RK + A +RI K
Sbjct: 4 EAILLLQGKIN----DEDDDTVGCRLLVLSKVIGCIIGKGGSTINEIRKRTNADVRI-SK 58
Query: 441 DQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSIN 487
P CA N+E+V + GE +V++AL QI RLR ++ +N
Sbjct: 59 GAKPNCADSNDELVEVVGEVSSVRDALVQIVLRLRDDVLKEKDGGLN 105
Score = 39.7 bits (91), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 46/78 (58%), Gaps = 12/78 (15%)
Query: 190 RLLVLSTQVGCLLGKGGCVIKQIDKL------------PTCALASDEVVQITGEVDTVRK 237
RLLVLS +GC++GKGG I +I K P CA ++DE+V++ GEV +VR
Sbjct: 24 RLLVLSKVIGCIIGKGGSTINEIRKRTNADVRISKGAKPNCADSNDELVEVVGEVSSVRD 83
Query: 238 ALKLISHQLLDNSPRDHE 255
AL I +L D+ ++ +
Sbjct: 84 ALVQIVLRLRDDVLKEKD 101
>gi|380792087|gb|AFE67919.1| poly(rC)-binding protein 2 isoform g, partial [Macaca mulatta]
Length = 193
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 90/161 (55%), Gaps = 11/161 (6%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTNAIFKA 71
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I+ ++ ++ + V RL+V ++Q G L+GKGG I E+R+ +GA
Sbjct: 72 FA--MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRL 474
+++ G D +P + E + I G +++ E + QI +
Sbjct: 130 QVQVAG-DMLP---NSTERAITIAGIPQSIIECVKQICVVM 166
Score = 43.1 bits (100), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 66/130 (50%), Gaps = 21/130 (16%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T +S+ LRL+V ++Q G L+GKGGC IK
Sbjct: 65 TNAIFKAFAMIIDKL---EEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIP 258
+I D LP +++ + I G ++ + +K I +L++ P+ +IP
Sbjct: 122 EIRESTGAQVQVAGDMLPN---STERAITIAGIPQSIIECVKQICVVMLESPPKGV-TIP 177
Query: 259 GNPTGPSHPL 268
P S P+
Sbjct: 178 YRPKPSSSPV 187
>gi|350424346|ref|XP_003493765.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Bombus impatiens]
Length = 626
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 144/325 (44%), Gaps = 48/325 (14%)
Query: 175 EVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIKQI----DKLPTCALASD----- 223
EV QE SK LR+L + +G ++GKGG IK+I D T + +D
Sbjct: 253 EVTQQEAYGLSKGEISLRILAHNNLIGRIIGKGGTTIKKIMQDTDTKITVSSINDINNFN 312
Query: 224 --EVVQITGEVDTVRKALKLISHQLLDNSPRDHESI-PGNPTGPS-HPLPDHSVSSQGAP 279
++ + G +D + KA +IS +L + D +++ P + P HP+ S + G
Sbjct: 313 LERIITVKGSIDNMSKAESMISSKLRQSYENDLQAMAPQSLMFPGLHPMAMMSTAGMGYS 372
Query: 280 ------YATGHRDV-ADIHLPMPPSIP--KFHESGVLDRPKPSPEILTFRLLCHDERVGG 330
Y TG LP IP E+ L P S VG
Sbjct: 373 SRGPGLYGTGPAPYPYQTSLPTQQGIPIGDTQETAFLYIPNTS--------------VGA 418
Query: 331 VIGKGGAIIRSLKQETGCDIKVM-----EAVSGTEDRLIVISGPAHPDDRISAPQDAVLR 385
+IG G+ IR++ + +G +K+ + V DR + I G P+ + A ++
Sbjct: 419 IIGSKGSHIRNIIRFSGASVKIAPIEQDKPVEQQNDRKVTIVG--SPESQWKA--QYLIF 474
Query: 386 VQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPK 445
+ R + + + +LV S Q+G ++GKGG + E+++++G+ I+ L + Q
Sbjct: 475 EKMREEGFVGGTEDVRLTIEILVPSTQVGRIIGKGGQNVRELQRVTGSIIK-LSEQQSTS 533
Query: 446 CASENEEVVLINGEFEAVQEALFQI 470
+++ E V I G F +VQ A +I
Sbjct: 534 PSADEEATVQIIGPFFSVQSAQRRI 558
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 138/341 (40%), Gaps = 63/341 (18%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRIS 377
R+L E VG +IG+ G+ IR + Q T + V S G ++ I I G +P++ +
Sbjct: 189 LRILVQSEMVGAIIGRQGSTIRQITQMTRARVDVHRKDSLGAAEKAITIYG--NPENCTN 246
Query: 378 APQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRI 437
A + ++ V + A + + R+L +N IG ++GKGG+ I ++ + + I +
Sbjct: 247 ACKK-IMEVTQQEAYGLSKGE---ISLRILAHNNLIGRIIGKGGTTIKKIMQDTDTKITV 302
Query: 438 LGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQ 497
+ I E ++ + G + + +A I+++LR + D + + P L
Sbjct: 303 SSINDINNF--NLERIITVKGSIDNMSKAESMISSKLRQSYENDL-----QAMAPQSL-- 353
Query: 498 VSPFPSFIGRRELSPPGM-YSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGM 556
FP +S GM YS+ GP + GP P +P ++ +
Sbjct: 354 --MFPGLHPMAMMSTAGMGYSSRGPGLYGT----GPAP----YP-----------YQTSL 392
Query: 557 PPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQ 616
P G P +G + +P + V I G G+ ++ I +
Sbjct: 393 PTQ------------------QGIP--IGDTQETAFLYIPNTSVGAIIGSKGSHIRNIIR 432
Query: 617 ISDAKITIT-----DPKPGATETVIIISGTPEQTHAAQSLI 652
S A + I P + + I G+PE AQ LI
Sbjct: 433 FSGASVKIAPIEQDKPVEQQNDRKVTIVGSPESQWKAQYLI 473
>gi|328723971|ref|XP_003247997.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
isoform 2 [Acyrthosiphon pisum]
Length = 559
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 149/333 (44%), Gaps = 51/333 (15%)
Query: 175 EVADQE--NTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI-----DKLPTCALAS----- 222
EV QE NT S +L++L + +G ++GK G IK+I K+ ++
Sbjct: 214 EVMQQEATNTNKSDVILKILAHNNLIGRIIGKEGNTIKRIMSETETKITVSSINDINSFN 273
Query: 223 -DEVVQITGEVDTVRKALKLISHQLLDNSPRDHESI-PGNPTGPS-HPLPDHSVSS---- 275
+ ++ + G ++ + KA IS +L + D +S+ P P HP+ S +
Sbjct: 274 YERIITVKGSIENMSKAEAQISAKLRQSFENDLQSMAPQTVMFPGLHPMAMMSATGITYP 333
Query: 276 -QGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGK 334
+G P + A P +IP + + D + T L + VG +IG
Sbjct: 334 GRGGPTSYQQFAPAPYPPMYPSTIPPINPALAADVQE------TAFLFIPNSAVGAIIGT 387
Query: 335 GGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQ-----------DAV 383
G+ IRS+ + +G +KV + TE+ + G A D SA Q D+
Sbjct: 388 KGSNIRSMIRFSGASVKV----ASTENEKQGVVGNA--GDANSAQQASRKVTIVGTADSQ 441
Query: 384 LRVQTRIARA------IPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRI 437
+ Q I +P+N E + +LV S+Q+G ++G+GGS + E+++++G+ I++
Sbjct: 442 WKAQGMIFDKLRDEGFVPNNEEVRLTVEILVPSSQVGRIIGRGGSNVRELQRVTGSIIKL 501
Query: 438 LGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
Q +E+ V I G F A Q A +I
Sbjct: 502 --PTQGSTDGTEDTTTVHIIGHFLATQSAQRRI 532
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 98/202 (48%), Gaps = 19/202 (9%)
Query: 291 HLPMPPSIPKFHESGVLDR----PKPSPEI------LTFRLLCHDERVGGVIGKGGAIIR 340
+ + P++ + + S + R P +P I R+L H + VG +IG+GG+ IR
Sbjct: 112 QIKVEPAMERRNRSAIRQRTYGAPGATPTIGNRQTEFPLRILVHSDMVGAIIGRGGSTIR 171
Query: 341 SLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNRE 399
+ Q+T + V + G+ ++ I I G +P++ +A + +L V + A + +
Sbjct: 172 QITQQTRARVDVHRKDNVGSLEKAITIYG--NPENCTNACRK-ILEVMQQEA---TNTNK 225
Query: 400 QTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGE 459
V+ ++L +N IG ++GK G+ I + + I + + I + E ++ + G
Sbjct: 226 SDVILKILAHNNLIGRIIGKEGNTIKRIMSETETKITVSSINDI--NSFNYERIITVKGS 283
Query: 460 FEAVQEALFQITTRLRHHFFRD 481
E + +A QI+ +LR F D
Sbjct: 284 IENMSKAEAQISAKLRQSFEND 305
>gi|407924223|gb|EKG17277.1| K-like protein [Macrophomina phaseolina MS6]
Length = 357
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 134/345 (38%), Gaps = 58/345 (16%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT R + + G +IGK G + +L+ ETG V + V G DR++ ++G +
Sbjct: 45 LTLRAIVSSKEAGVIIGKAGQNVANLRDETGVRAGVSKVVPGVHDRVLTVTGA------L 98
Query: 377 SAPQDAVLRVQTRIARAIPD-------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRK 429
S A V + P N T RLL++ NQ+G ++G+ G I +++
Sbjct: 99 SGISKAYHLVAKGLLEGAPSVGMGGVINTSGTHPVRLLISHNQMGTIIGRAGLKIKQIQD 158
Query: 430 LSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRP 489
SG + + K+ +P+ E +V I G E +++A ++I L R + P
Sbjct: 159 ASGVRM-VAQKEMLPQS---TERIVEIQGTPEGIEKATWEIGKCLIDDHERGYGTVLYNP 214
Query: 490 LNPTFLDQVSPFPS-FIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFM 548
P + F G R + G ++F S P S D ++
Sbjct: 215 AVRVQAGTTGPVTNGFTGNRSYNRTGHGNDFSDS-----------PTYSRRSGSDAAS-- 261
Query: 549 HHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDG 608
RP MP D + Q + +P +V I G G
Sbjct: 262 ----RPPMPTTTEDGEEIQTQN----------------------ISIPSDMVGCIIGRGG 295
Query: 609 ACLKQIRQISDAKITITD-PKPGATETVIIISGTPEQTHAAQSLI 652
+ + +IR+ S A+I+I P E + I G+P A L+
Sbjct: 296 SKISEIRKSSGARISIAKAPHDETGERMFTIMGSPSSNEKALYLL 340
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 111/245 (45%), Gaps = 31/245 (12%)
Query: 154 SKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQID 213
S + KA LV + ++E P + NT S +RLL+ Q+G ++G+ G IKQI
Sbjct: 99 SGISKAYHLVAKGLLEGAPSVGMGGVINT-SGTHPVRLLISHNQMGTIIGRAGLKIKQIQ 157
Query: 214 KLPTCAL---------ASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPT-- 262
+ +++ +V+I G + + KA I L+D+ R + ++ NP
Sbjct: 158 DASGVRMVAQKEMLPQSTERIVEIQGTPEGIEKATWEIGKCLIDDHERGYGTVLYNPAVR 217
Query: 263 ---GPSHPLPDHSVSSQGAPYATGH-RDVADIHLPMPPSIPKFHESGVLDRPKPSP---- 314
G + P+ + ++ + TGH D +D P+ + S RP P P
Sbjct: 218 VQAGTTGPVTNGFTGNR-SYNRTGHGNDFSD-----SPTYSRRSGSDAASRP-PMPTTTE 270
Query: 315 ---EILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA-VSGTEDRLIVISGPA 370
EI T + + VG +IG+GG+ I +++ +G I + +A T +R+ I G
Sbjct: 271 DGEEIQTQNISIPSDMVGCIIGRGGSKISEIRKSSGARISIAKAPHDETGERMFTIMGSP 330
Query: 371 HPDDR 375
+++
Sbjct: 331 SSNEK 335
>gi|328723977|ref|XP_001952825.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
isoform 1 [Acyrthosiphon pisum]
Length = 563
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 149/333 (44%), Gaps = 51/333 (15%)
Query: 175 EVADQE--NTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI-----DKLPTCALAS----- 222
EV QE NT S +L++L + +G ++GK G IK+I K+ ++
Sbjct: 214 EVMQQEATNTNKSDVILKILAHNNLIGRIIGKEGNTIKRIMSETETKITVSSINDINSFN 273
Query: 223 -DEVVQITGEVDTVRKALKLISHQLLDNSPRDHESI-PGNPTGPS-HPLPDHSVSS---- 275
+ ++ + G ++ + KA IS +L + D +S+ P P HP+ S +
Sbjct: 274 YERIITVKGSIENMSKAEAQISAKLRQSFENDLQSMAPQTVMFPGLHPMAMMSATGITYP 333
Query: 276 -QGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGK 334
+G P + A P +IP + + D + T L + VG +IG
Sbjct: 334 GRGGPTSYQQFAPAPYPPMYPSTIPPINPALAADVQE------TAFLFIPNSAVGAIIGT 387
Query: 335 GGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQ-----------DAV 383
G+ IRS+ + +G +KV + TE+ + G A D SA Q D+
Sbjct: 388 KGSNIRSMIRFSGASVKV----ASTENEKQGVVGNA--GDANSAQQASRKVTIVGTADSQ 441
Query: 384 LRVQTRIARA------IPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRI 437
+ Q I +P+N E + +LV S+Q+G ++G+GGS + E+++++G+ I++
Sbjct: 442 WKAQGMIFDKLRDEGFVPNNEEVRLTVEILVPSSQVGRIIGRGGSNVRELQRVTGSIIKL 501
Query: 438 LGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
Q +E+ V I G F A Q A +I
Sbjct: 502 --PTQGSTDGTEDTTTVHIIGHFLATQSAQRRI 532
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 98/202 (48%), Gaps = 19/202 (9%)
Query: 291 HLPMPPSIPKFHESGVLDR----PKPSPEI------LTFRLLCHDERVGGVIGKGGAIIR 340
+ + P++ + + S + R P +P I R+L H + VG +IG+GG+ IR
Sbjct: 112 QIKVEPAMERRNRSAIRQRTYGAPGATPTIGNRQTEFPLRILVHSDMVGAIIGRGGSTIR 171
Query: 341 SLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNRE 399
+ Q+T + V + G+ ++ I I G +P++ +A + +L V + A + +
Sbjct: 172 QITQQTRARVDVHRKDNVGSLEKAITIYG--NPENCTNACRK-ILEVMQQEA---TNTNK 225
Query: 400 QTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGE 459
V+ ++L +N IG ++GK G+ I + + I + + I + E ++ + G
Sbjct: 226 SDVILKILAHNNLIGRIIGKEGNTIKRIMSETETKITVSSINDI--NSFNYERIITVKGS 283
Query: 460 FEAVQEALFQITTRLRHHFFRD 481
E + +A QI+ +LR F D
Sbjct: 284 IENMSKAEAQISAKLRQSFEND 305
>gi|410920039|ref|XP_003973491.1| PREDICTED: poly(rC)-binding protein 2-like [Takifugu rubripes]
Length = 327
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 87/157 (55%), Gaps = 11/157 (7%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTTAIFK- 70
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I+ ++ ++ + V R++V ++Q G L+GKGG I E+R+ +GA
Sbjct: 71 -AFSMIIDKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
+++ G D +P + E + I G ++ E + QI
Sbjct: 130 QVQVAG-DMLP---NSTERAITIAGTAHSIIECVKQI 162
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 112/249 (44%), Gaps = 46/249 (18%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI 212
T+ + KA ++ +++ E + + + + T LR++V ++Q G L+GKGGC IK+I
Sbjct: 65 TTAIFKAFSMIIDKLEE-DISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEI 123
Query: 213 ------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGN 260
D LP +++ + I G ++ + +K I +L++ P+ +IP
Sbjct: 124 RESTGAQVQVAGDMLPN---STERAITIAGTAHSIIECVKQICVVMLESPPKG-VTIPYR 179
Query: 261 PTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMP--------PSIPKFHESGVLDRPKP 312
P P+ + + G YA + +P P P + K H+ + P P
Sbjct: 180 PKPSGSPV----IFAGGQAYAVQGQHA----IPQPDSSSAAISPQLSKLHQLAMQQGPFP 231
Query: 313 -------------SPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGT 359
S + + + ++ +G +IG+ GA I ++Q +G IK+ V G+
Sbjct: 232 MATCNQGFTGMDASAQACSHEMTIPNDLIGCIIGRQGAKISEIRQMSGAQIKIANPVDGS 291
Query: 360 EDRLIVISG 368
DR + I+G
Sbjct: 292 TDRQVTITG 300
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 41/67 (61%)
Query: 593 VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLI 652
+ +P L+ I G GA + +IRQ+S A+I I +P G+T+ + I+G+P A+ LI
Sbjct: 253 MTIPNDLIGCIIGRQGAKISEIRQMSGAQIKIANPVDGSTDRQVTITGSPASIGLAEYLI 312
Query: 653 QAFVMSE 659
+A + SE
Sbjct: 313 KARLSSE 319
>gi|355709446|gb|AES03594.1| Poly rC-binding protein 1 [Mustela putorius furo]
Length = 209
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 87/157 (55%), Gaps = 11/157 (7%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTNAIFKA 71
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I ++ ++ + V RL+V + Q G L+GKGG I E+R+ +GA
Sbjct: 72 FA--MIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
+++ G D +P + E + I G ++V E + QI
Sbjct: 130 QVQVAG-DMLP---NSTERAITIAGVPQSVTECVKQI 162
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 66/134 (49%), Gaps = 24/134 (17%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T +S+ LRL+V +TQ G L+GKGGC IK
Sbjct: 65 TNAIFKAFAMIIDKL---EEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIK 121
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALK---LISHQLLDNSPRDH- 254
+I D LP +++ + I G +V + +K L+ + L SP+
Sbjct: 122 EIRESTGAQVQVAGDMLPN---STERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRV 178
Query: 255 ESIPGNPTGPSHPL 268
+IP P S P+
Sbjct: 179 MTIPYQPMPASSPV 192
>gi|119195161|ref|XP_001248184.1| hypothetical protein CIMG_01955 [Coccidioides immitis RS]
gi|303310665|ref|XP_003065344.1| KH domain containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|240105006|gb|EER23199.1| KH domain containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|392862573|gb|EAS36772.2| KH domain RNA-binding protein [Coccidioides immitis RS]
Length = 366
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 142/348 (40%), Gaps = 42/348 (12%)
Query: 316 ILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDR 375
+LT R + + G +IGK G + L+ ETG V + V G DR++ ++GP +
Sbjct: 47 MLTLRAIVSTKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGPLQGTAK 106
Query: 376 ISAPQDAVLRV---QTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSG 432
L Q + I +N V RLL++ NQ+G ++G+ G I ++ SG
Sbjct: 107 AYGMVAKSLLEGAPQMGMGGIIQNNGTHPV--RLLISHNQMGTIIGRNGLKIKCIQDASG 164
Query: 433 AYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNP 492
+ + K+ +P+ E +V + G E +++A+++I L + R + P
Sbjct: 165 VRM-VAQKEMLPQST---ERIVEVQGTPEGIEKAVWEIGKCLIDDWQRGTGTVLYNPAVR 220
Query: 493 TFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIH 552
+ S +F+G P YS G +++ G+ DH + H
Sbjct: 221 ANVGGASMNSAFVG----PNPNTYS--GRPYNR---------TGNGADFSDHPGTYNRRH 265
Query: 553 RPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLK 612
P G P+ D G + + +P +V I G G+ +
Sbjct: 266 NSDAPNR---------------GIPLVTED--GEEVQTQNISIPSDMVGCIIGRGGSKIS 308
Query: 613 QIRQISDAKITITDPKPGAT-ETVIIISGTPEQTHAAQSLIQAFVMSE 659
+IR+ S A+I+I T E + I G+ + A L+ + +E
Sbjct: 309 EIRRSSGARISIAKAAHDETGERMFTIMGSAQANEKALYLLYENLEAE 356
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 97/216 (44%), Gaps = 36/216 (16%)
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQIDKLPTCAL---------ASDEVVQITGEVDTVRKAL 239
+RLL+ Q+G ++G+ G IK I + +++ +V++ G + + KA+
Sbjct: 136 VRLLISHNQMGTIIGRNGLKIKCIQDASGVRMVAQKEMLPQSTERIVEVQGTPEGIEKAV 195
Query: 240 KLISHQLLDNSPRDHESIPGNPT------GPSH------PLPDHSVSSQGAPYA-TGH-R 285
I L+D+ R ++ NP G S P P+ + G PY TG+
Sbjct: 196 WEIGKCLIDDWQRGTGTVLYNPAVRANVGGASMNSAFVGPNPN---TYSGRPYNRTGNGA 252
Query: 286 DVADIHLPMPPSIPKFHESGVLDRPKP-----SPEILTFRLLCHDERVGGVIGKGGAIIR 340
D +D P + + H S +R P E+ T + + VG +IG+GG+ I
Sbjct: 253 DFSD----HPGTYNRRHNSDAPNRGIPLVTEDGEEVQTQNISIPSDMVGCIIGRGGSKIS 308
Query: 341 SLKQETGCDIKVMEAVSG-TEDRLIVISGPAHPDDR 375
+++ +G I + +A T +R+ I G A +++
Sbjct: 309 EIRRSSGARISIAKAAHDETGERMFTIMGSAQANEK 344
>gi|367050644|ref|XP_003655701.1| hypothetical protein THITE_2119679 [Thielavia terrestris NRRL 8126]
gi|347002965|gb|AEO69365.1| hypothetical protein THITE_2119679 [Thielavia terrestris NRRL 8126]
Length = 374
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 82/370 (22%), Positives = 140/370 (37%), Gaps = 85/370 (22%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT R + + G +IGKGG + L++ETG V + V G DR++ I+G
Sbjct: 50 LTLRAIVSSKEAGVIIGKGGKNVADLREETGVKAGVSKVVQGVYDRVLTITGGC------ 103
Query: 377 SAPQDAVLRVQTRIARAIPDNREQTVM-----------TRLLVASNQIGCLLGKGGSIIA 425
+A+ R +AR++ + M +LL++ NQ+G ++G+ G I
Sbjct: 104 ----EAISRAYAAVARSLLEGAPTMGMGGVIQNNGTHPIKLLISHNQMGTIIGRQGLKIK 159
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPS 485
++ +SG + + K+ +P+ E +V + G E +Q A+++I L + R
Sbjct: 160 HIQDVSGVRM-VAQKEMLPQS---TERIVEVQGTPEGIQRAVWEICKCLVDDWQRGTGTV 215
Query: 486 INRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHS 545
+ NP Q P G GS + D
Sbjct: 216 L---YNPVVRTQGVGAPGISG-----------------------------GSGYVQDRAP 243
Query: 546 AFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGF-------PDFVGPPH--------RR 590
+ R G + GGP + P GPP +
Sbjct: 244 YGGSRVTRTGNGADFSN------------GGPRSYNRRSDSDPSNRGPPTHDENGEEIQT 291
Query: 591 VPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITD-PKPGATETVIIISGTPEQTHAAQ 649
+ +P +V I G G+ + +IR+ S A+I+I P E + I GT + A
Sbjct: 292 QNISIPADMVGCIIGRAGSKISEIRKTSGARISIAKAPHDETGERMFTIMGTSKANETAL 351
Query: 650 SLIQAFVMSE 659
L+ + +E
Sbjct: 352 FLLYENLEAE 361
Score = 42.7 bits (99), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 94/211 (44%), Gaps = 25/211 (11%)
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQIDKLPTCAL---------ASDEVVQITGEVDTVRKAL 239
++LL+ Q+G ++G+ G IK I + + +++ +V++ G + +++A+
Sbjct: 138 IKLLISHNQMGTIIGRQGLKIKHIQDVSGVRMVAQKEMLPQSTERIVEVQGTPEGIQRAV 197
Query: 240 KLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQG------APYA----TGHRDVAD 289
I L+D+ R ++ NP + + +S APY T + AD
Sbjct: 198 WEICKCLVDDWQRGTGTVLYNPVVRTQGVGAPGISGGSGYVQDRAPYGGSRVTRTGNGAD 257
Query: 290 IHLPMPPSIPKFHESGVLDRPKPS-----PEILTFRLLCHDERVGGVIGKGGAIIRSLKQ 344
P S + +S +R P+ EI T + + VG +IG+ G+ I +++
Sbjct: 258 FSNGGPRSYNRRSDSDPSNRGPPTHDENGEEIQTQNISIPADMVGCIIGRAGSKISEIRK 317
Query: 345 ETGCDIKVMEA-VSGTEDRLIVISGPAHPDD 374
+G I + +A T +R+ I G + ++
Sbjct: 318 TSGARISIAKAPHDETGERMFTIMGTSKANE 348
>gi|328720738|ref|XP_001949210.2| PREDICTED: poly(rC)-binding protein 3-like [Acyrthosiphon pisum]
Length = 436
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 152/353 (43%), Gaps = 51/353 (14%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT R+L H VG VIGKGG +++++ ++G +V+ + T +R++ I+G + +
Sbjct: 21 LTIRILFHGREVGNVIGKGGETVKNIRDQSGA--RVLISDGSTPERIVTITGTTNAICK- 77
Query: 377 SAPQDAVLRVQTRIARAIPD-NREQTVMT-RLLVASNQIGCLLGKGGSIIAEMRKLSGAY 434
A + L+V+ R D N + +T +L+V ++Q G ++GKGG I E+R+ SGA
Sbjct: 78 -ATELIGLKVEEFFERQNGDWNGPKAPLTFKLIVPASQCGFIIGKGGCKIKEIRESSGAA 136
Query: 435 IRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFP-SINRPLNPT 493
I++ D +P + E +V I G + + ++Q+ + D+ P S P +P
Sbjct: 137 IQV-ASDMLP---NSTERLVSITGTTGTISQCVYQVC-----NVLLDSPPRSATIPYDPR 187
Query: 494 FLDQVSPFPSF-----IGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFM 548
+ S F S GR+ +P + G + GG P
Sbjct: 188 --SKTSGFASSAVGNDFGRQRTNPLASLAALGLGTA---STGGINPAALAALAGSQLRTG 242
Query: 549 HHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDG 608
+ +R G H K E + + VP L+ + G G
Sbjct: 243 NRQNRNGSGEH----KNQNSNSNTET----------------ISMTVPNDLIGCVIGRRG 282
Query: 609 ACLKQIRQISDAKITITDP----KPGATETV-IIISGTPEQTHAAQSLIQAFV 656
+ + +IRQIS A + I + G E I I+G + A+ LI+ V
Sbjct: 283 SKIAEIRQISGALVHIAKGEGTHENGENEDRHITITGNKDSISVAKYLIEMSV 335
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 93/217 (42%), Gaps = 36/217 (16%)
Query: 187 FVLRLLVLSTQVGCLLGKGGCVIKQIDKLPTCAL---------ASDEVVQITGEVDTVRK 237
+L+V ++Q G ++GKGGC IK+I + A+ +++ +V ITG T+ +
Sbjct: 104 LTFKLIVPASQCGFIIGKGGCKIKEIRESSGAAIQVASDMLPNSTERLVSITGTTGTISQ 163
Query: 238 ALKLISHQLLDNSPRD--------------HESIPGNPTGPSHPLPDHSVSSQGAPYA-T 282
+ + + LLD+ PR S GN G P S+++ G A T
Sbjct: 164 CVYQVCNVLLDSPPRSATIPYDPRSKTSGFASSAVGNDFGRQRTNPLASLAALGLGTAST 223
Query: 283 GHRDVADIHLPMPPSIPKFHE-----SGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGA 337
G + A + + + SG + T + ++ +G VIG+ G+
Sbjct: 224 GGINPAALAALAGSQLRTGNRQNRNGSGEHKNQNSNSNTETISMTVPNDLIGCVIGRRGS 283
Query: 338 IIRSLKQETGCDIKVMEAVSGT------EDRLIVISG 368
I ++Q +G + + + GT EDR I I+G
Sbjct: 284 KIAEIRQISGALVHIAKG-EGTHENGENEDRHITITG 319
>gi|321257616|ref|XP_003193652.1| cytoplasm protein [Cryptococcus gattii WM276]
gi|317460122|gb|ADV21865.1| Cytoplasm protein, putative [Cryptococcus gattii WM276]
Length = 367
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 156/365 (42%), Gaps = 49/365 (13%)
Query: 312 PSPEI------LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIV 365
PSP+ L+ R L + G +IGK GA I +++ TG V + V G +DR++
Sbjct: 20 PSPDAQGAEHQLSLRSLVSTKEAGIIIGKSGATIAAIRDSTGVKAGVSKVVQGVQDRVLS 79
Query: 366 ISGPAHPDDRISAPQDAVLRVQTRIARAI--PDNREQTVMTRLLVASNQIGCLLGKGGSI 423
++G A + A L ++T ++ + P RLL++ N +G ++G+ G
Sbjct: 80 VTGDLEGVASAYA-EVARLLLETPLSDSSLPPPPVGSFTSIRLLISHNLMGTVIGRSGLK 138
Query: 424 IAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAF 483
I +++ +SGA + + K+ +P+ E VV + G +A++ A+ +I L + R A
Sbjct: 139 IKQIQDMSGARM-VASKEMLPQS---TERVVEVQGSVDAIKTAVLEIGKCLLEDWDRGAG 194
Query: 484 PSINRPLNPTFLDQVSPFPSFIGRREL--SPPGM-YSNFGPSFHKFDAVGGPPPPGSFHP 540
+ +P +G + + S G+ ++ F + P GS
Sbjct: 195 TVL---YHPGAAGDAGVLAGGLGAQAVTGSTGGIRRTSVAAGFGGYSGDRRPSRGGSISG 251
Query: 541 HDDHSAFMHHIHRPGMPPHMPDMKPW-GPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSL 599
S + KP GPQ + P R + +P +
Sbjct: 252 PSGVSG---------------ERKPSEGPQ-----------VNLNDPNLRTQNISIPSDM 285
Query: 600 VP--IIQGEDGACLKQIRQISDAKITITD-PKPGATETVIIISGTPEQTHAAQSLIQAFV 656
V II G G+ + +IR++S ++I+I P E + I GTPE T A L+ + +
Sbjct: 286 VGCIIISGRGGSKITEIRRLSGSRISIAKVPHDETGERMFTIQGTPEATERALMLLYSQL 345
Query: 657 MSETE 661
SE E
Sbjct: 346 ESEKE 350
>gi|344266065|ref|XP_003405101.1| PREDICTED: poly(rC)-binding protein 2-like isoform 2 [Loxodonta
africana]
Length = 293
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 95/176 (53%), Gaps = 11/176 (6%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTNAIFKA 71
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I+ ++ ++ + V RL+V ++Q G L+GKGG I E+R+ +GA
Sbjct: 72 FAM--IIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRP 489
+++ G D +P + E + I G +++ E + QI + + +I +P
Sbjct: 130 QVQVAG-DMLP---NSTERAITIAGIPQSIIECVKQICVVMLEAYTIQGQYAIPQP 181
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 105/229 (45%), Gaps = 35/229 (15%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T +S+ LRL+V ++Q G L+GKGGC IK
Sbjct: 65 TNAIFKAFAMIIDKL---EEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 211 QIDKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPD 270
+I + ++ VQ+ G+ +L NS +I G P +
Sbjct: 122 EIRE------STGAQVQVAGD--------------MLPNSTERAITIAGIPQSIIECVKQ 161
Query: 271 HSV------SSQGAPYATGHRDVADIH-LPMPPS-IPKFH-ESGVLDRPKPSPEILTFRL 321
V + QG YA D+ +H L M S P H +G S + + L
Sbjct: 162 ICVVMLEAYTIQG-QYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSAGLDASAQTTSHEL 220
Query: 322 LCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPA 370
++ +G +IG+ GA I ++Q +G IK+ V G+ DR + I+G A
Sbjct: 221 TIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSA 269
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 109/295 (36%), Gaps = 55/295 (18%)
Query: 401 TVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEF 460
T+ RLL+ ++G ++GK G + +MR+ SGA I I + P E ++ + G
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERIITLAGPT 65
Query: 461 EAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSPFP---SFIGRRELSPPGMYS 517
A+ +A I +L S P L V P S IG+ +
Sbjct: 66 NAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRE 125
Query: 518 NFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPHM----------------- 560
+ G G P+ A I G+P +
Sbjct: 126 STGAQVQ---------VAGDMLPNSTERA----ITIAGIPQSIIECVKQICVVMLEAYTI 172
Query: 561 --------PDMKPWGPQGLMEVGGPM-----GFPDFVGPPHRRVP--VVVPRSLVPIIQG 605
PD+ + + PM GF + + + +P L+ I G
Sbjct: 173 QGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIG 232
Query: 606 EDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSET 660
GA + +IRQ+S A+I I +P G+T+ + I+G+ AQ LI + SET
Sbjct: 233 RQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVRLSSET 287
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 85/193 (44%), Gaps = 42/193 (21%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVM-EAVSGTEDRLIVISGPAHPDDR 375
+T RL+ + G +IGKGG I+ +++ TG ++V + + + +R I I+G P
Sbjct: 98 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGI--PQSI 155
Query: 376 I-SAPQDAVLRVQTRIAR---AIP------------------------------DNREQT 401
I Q V+ ++ + AIP D QT
Sbjct: 156 IECVKQICVVMLEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSAGLDASAQT 215
Query: 402 VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFE 461
L + ++ IGC++G+ G+ I E+R++SGA I+I P S + +V I G
Sbjct: 216 TSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN----PVEGSTDRQVT-ITGSAA 270
Query: 462 AVQEALFQITTRL 474
++ A + I RL
Sbjct: 271 SISLAQYLINVRL 283
>gi|346971553|gb|EGY15005.1| Poly(rC)-binding protein [Verticillium dahliae VdLs.17]
Length = 514
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 143/354 (40%), Gaps = 46/354 (12%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT R + + G +IGKGG + L+ ETG V + V G DR++ I+G R
Sbjct: 47 LTLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTITGGCEAISRA 106
Query: 377 SA-PQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYI 435
A A+L + T +LL++ NQ+G ++G+ G I ++ +SG +
Sbjct: 107 YAIVAQALLEGAPSLGMGGVPQSNGTHPIKLLISHNQMGTIIGRQGLKIKHIQDVSGVRM 166
Query: 436 RILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPL----- 490
+ K+ +P+ E +V + G + ++ A+++I+ L + R + P+
Sbjct: 167 -VAQKEMLPQ---STERIVEVQGTPDGIRAAIWEISKCLVDDWQRGTGTVLYNPVVRTQP 222
Query: 491 --NPTFLDQVSPFPSFIGRR--ELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSA 546
P +PS G R E S P + + F + GG P S D ++
Sbjct: 223 GSTPAVGGTSPSYPSTGGGRSQEYSSPRVLRTGNGA--DFSSNGGGQRPYSRRSDSDAAS 280
Query: 547 FMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGE 606
G P H D G + + +P +V I G
Sbjct: 281 R-------GPPTH----------------------DENGEELQTQNISIPADMVGCIIGR 311
Query: 607 DGACLKQIRQISDAKITITD-PKPGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
G+ + +IR+ S A+I+I P E + I GT + +A L+ + +E
Sbjct: 312 AGSKISEIRKTSGARISIAKAPHDETGERMFTIMGTSKANESALFLLYENLEAE 365
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 56/115 (48%), Gaps = 5/115 (4%)
Query: 396 DNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVL 455
+N E+ + + ++ +GC++G+ GS I+E+RK SGA I I + P + E +
Sbjct: 288 ENGEELQTQNISIPADMVGCIIGRAGSKISEIRKTSGARISIA---KAPHDET-GERMFT 343
Query: 456 INGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSPFPSFIGRREL 510
I G +A + ALF + L R + + ++ + L + P IG E+
Sbjct: 344 IMGTSKANESALFLLYENLEAEKMRRSQAQTSEAISRSDLPRGCPI-CLIGSAEI 397
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 52/251 (20%), Positives = 106/251 (42%), Gaps = 33/251 (13%)
Query: 156 VQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKL 215
+ +A +V + ++E P + + + ++LL+ Q+G ++G+ G IK I +
Sbjct: 103 ISRAYAIVAQALLEGAPSLGMGGVPQSNGT-HPIKLLISHNQMGTIIGRQGLKIKHIQDV 161
Query: 216 PTCAL---------ASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNP----- 261
+ +++ +V++ G D +R A+ IS L+D+ R ++ NP
Sbjct: 162 SGVRMVAQKEMLPQSTERIVEVQGTPDGIRAAIWEISKCLVDDWQRGTGTVLYNPVVRTQ 221
Query: 262 ---------TGPSHPLPDHSVSSQ-GAPYATGHRDVADIHLPMPPSIP--KFHESGVLDR 309
T PS+P S + +P + AD P + +S R
Sbjct: 222 PGSTPAVGGTSPSYPSTGGGRSQEYSSPRVLRTGNGADFSSNGGGQRPYSRRSDSDAASR 281
Query: 310 PKPS-----PEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSG-TEDRL 363
P+ E+ T + + VG +IG+ G+ I +++ +G I + +A T +R+
Sbjct: 282 GPPTHDENGEELQTQNISIPADMVGCIIGRAGSKISEIRKTSGARISIAKAPHDETGERM 341
Query: 364 IVISGPAHPDD 374
I G + ++
Sbjct: 342 FTIMGTSKANE 352
>gi|256083125|ref|XP_002577800.1| heterogeneous nuclear ribonucleoprotein [Schistosoma mansoni]
gi|353230298|emb|CCD76469.1| putative heterogeneous nuclear ribonucleoprotein k [Schistosoma
mansoni]
Length = 371
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 86/374 (22%), Positives = 142/374 (37%), Gaps = 56/374 (14%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISA 378
R L + G +IGKGG I+ +++E +KV S +R++V+ G
Sbjct: 11 LRFLISTKAAGVIIGKGGENIKKIREEY--SVKVTIPDSNGPERVLVLDGDL-------- 60
Query: 379 PQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRIL 438
+V+ + + NR+ V RLLV +Q GC++G+ G I E+R+ SG +
Sbjct: 61 --GSVIEIFRENLEKMQSNRDDGVDLRLLVHQSQAGCVIGRAGYKIKELREQSGLHTL-- 116
Query: 439 GKDQIPKCASENEEVVLINGEFEAVQEALFQITTRL---------RHHFFRDAFPSINRP 489
K C + V+ + G+ V + L I L +++ R+A I+
Sbjct: 117 -KVYQMLCPCSTDRVIQLVGDVGKVLDCLRSIAELLEGAPPKGSRQNYDARNADEFISPE 175
Query: 490 LNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKF-DAVGGPPPPGSFHPHDDHSAFM 548
+ P + + R Y P + + G G+ + + +
Sbjct: 176 YGGWGVGNQGPGLNLVRSRNNVANTSY----PHNNILTTGIFGGGASGATGRNGGQTTSV 231
Query: 549 HHIHRPGMPPHMPDMKPWGPQGLMEVGGP----------------------MGFPDFVG- 585
G+ PH G GGP G P+ +
Sbjct: 232 SQALAGGL-PHASAAAMLAATGGQTTGGPNPGTAGDAAAATAAAMVAAGLMRGLPNRMAM 290
Query: 586 ---PPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTP 642
P V V ++ I G G + Q+R S+A I I+ +PG + +I I+GTP
Sbjct: 291 SILTPTTSTQVSVSNKMIGAIMGRSGCRINQVRHESNADIKISKQEPGVEDRIITITGTP 350
Query: 643 EQTHAAQSLIQAFV 656
EQ AQ L+Q V
Sbjct: 351 EQIQNAQFLLQMCV 364
Score = 42.7 bits (99), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 128/314 (40%), Gaps = 55/314 (17%)
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQIDK---LPT-------CALASDEVVQITGEVDTVRKA 238
LRLLV +Q GC++G+ G IK++ + L T C ++D V+Q+ G+V V
Sbjct: 84 LRLLVHQSQAGCVIGRAGYKIKELREQSGLHTLKVYQMLCPCSTDRVIQLVGDVGKVLDC 143
Query: 239 LKLISHQLLDNSPRDHESIPGNPTGPSHPL----PDHSVSSQGAPYATGHRDVADIHLPM 294
L+ I+ +LL+ +P P G D +S + + G++
Sbjct: 144 LRSIA-ELLEGAP---------PKGSRQNYDARNADEFISPEYGGWGVGNQG-------- 185
Query: 295 PPSIPKFH-ESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDI--- 350
P + + V + P ILT + G G+ G S+ Q +
Sbjct: 186 -PGLNLVRSRNNVANTSYPHNNILTTGIFGGG--ASGATGRNGGQTTSVSQALAGGLPHA 242
Query: 351 --KVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVM----- 403
M A +G + GP +A A V + R +P+ +++
Sbjct: 243 SAAAMLAATGGQ----TTGGPNPGTAGDAAAATAAAMVAAGLMRGLPNRMAMSILTPTTS 298
Query: 404 TRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAV 463
T++ V++ IG ++G+ G I ++R S A I+I Q P + ++ I G E +
Sbjct: 299 TQVSVSNKMIGAIMGRSGCRINQVRHESNADIKI--SKQEPGV---EDRIITITGTPEQI 353
Query: 464 QEALFQITTRLRHH 477
Q A F + ++ +
Sbjct: 354 QNAQFLLQMCVKRY 367
>gi|365766932|gb|EHN08421.1| Pbp2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 413
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 87/387 (22%), Positives = 143/387 (36%), Gaps = 80/387 (20%)
Query: 302 HESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTED 361
H D P P + R+LC + ++G GA I +K ET I + + G +
Sbjct: 52 HSDNDHDSPDNVPSDVHLRMLCLVKHASLIVGHKGATISRIKSETSARINISNNIRGVPE 111
Query: 362 RLIVISGPAHPDDRISAPQDAVLRVQTRIARAI------PDNREQT-VMTRLLVASNQIG 414
R++ + G D V + I RA+ DN E + LL+ + +G
Sbjct: 112 RIVYVRGTC----------DDVAKAYGMIVRALLEEHGNEDNGEDIEISINLLIPHHLMG 161
Query: 415 CLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRL 474
C++GK GS + E+ LS A + +Q+ N+ ++ ING +A+ A F I+ L
Sbjct: 162 CIIGKRGSRLREIEDLSAAKL-FASPNQL---LLSNDRILTINGVPDAIHIATFYISQTL 217
Query: 475 RHHFFRDAFPSINRPL-------NPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFD 527
+ ++ R + N +D P F R
Sbjct: 218 LNFQMESPQKNVKRSIYYQPTQFNSVLIDHSQPNTIFHQRNH------------------ 259
Query: 528 AVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQ-GLMEVGGPMGF-PDFVG 585
+HP D + + +P + PQ V F P+FV
Sbjct: 260 ---------QYHPSD---KLLSYKPNKNLPISSTXLSMATPQYTTASVANATAFQPNFVI 307
Query: 586 PPHRRV--PVVVP----RSLVPIIQ--------------GEDGACLKQIRQISDAKITIT 625
P + PV+ P L+ +Q G+DG + +++ + I I
Sbjct: 308 PNVTVLDGPVISPAPGNHLLMNFVQQEIFIDEKFVGNVIGKDGKHINSVKESTGCSIIIQ 367
Query: 626 DPKPGATETVIIISGTPEQTHAAQSLI 652
DP G++E + I GT + AA LI
Sbjct: 368 DPVEGSSERRLTIRGTFMASQAAIMLI 394
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 119/290 (41%), Gaps = 69/290 (23%)
Query: 156 VQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKL 215
V KA ++ ++E E +++N + + + LL+ +GC++GK G +++I+ L
Sbjct: 123 VAKAYGMIVRALLE-----EHGNEDNGEDIEISINLLIPHHLMGCIIGKRGSRLREIEDL 177
Query: 216 PTCAL---------ASDEVVQITGEVDTVRKALKLISHQLLD---NSPRDH--ESIPGNP 261
L ++D ++ I G D + A IS LL+ SP+ + SI P
Sbjct: 178 SAAKLFASPNQLLLSNDRILTINGVPDAIHIATFYISQTLLNFQMESPQKNVKRSIYYQP 237
Query: 262 TGPSHPLPDHS-----------------------------VSSQGAPYATGHRDVADIH- 291
T + L DHS +SS AT A +
Sbjct: 238 TQFNSVLIDHSQPNTIFHQRNHQYHPSDKLLSYKPNKNLPISSTXLSMATPQYTTASVAN 297
Query: 292 -LPMPPS--IPKFHESGVLDRPKPSPE-----ILTF---RLLCHDERVGGVIGKGGAIIR 340
P+ IP VLD P SP ++ F + ++ VG VIGK G I
Sbjct: 298 ATAFQPNFVIPNV---TVLDGPVISPAPGNHLLMNFVQQEIFIDEKFVGNVIGKDGKHIN 354
Query: 341 SLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRI 390
S+K+ TGC I + + V G+ +R + I G A Q A++ + +I
Sbjct: 355 SVKESTGCSIIIQDPVEGSSERRLTIRGT------FMASQAAIMLISNKI 398
>gi|324505572|gb|ADY42393.1| Heterogeneous nuclear ribonucleoprotein K [Ascaris suum]
Length = 415
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 100/383 (26%), Positives = 158/383 (41%), Gaps = 67/383 (17%)
Query: 280 YATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAII 339
YATG R AD + E+ + RLL G VIGKGG I
Sbjct: 85 YATGKRQRAD----------GYQEALAAGK-------YELRLLVPSRGAGAVIGKGGESI 127
Query: 340 RSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRV----QTRIARAIP 395
+ L+ E CD + S T +R++ I A D+ I + + R+ +TR +
Sbjct: 128 KRLRAE--CDATLTIPDSQTPERIVTIV--AEIDNVIRCVNEIIPRLDECLKTRDSDDEG 183
Query: 396 DNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVL 455
R ++ + RLLV + G ++G+GG I E+R+ + +++ + C E V+
Sbjct: 184 SARGESEL-RLLVHQSHAGAIIGRGGYRIKELREETSTQLKVYSQC----CPQSTERVIQ 238
Query: 456 INGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGM 515
I G E + + I L+ + PS RP F D P+F+
Sbjct: 239 IIGVPEKIIACVILIINMLKEIPIKG--PS--RPYESMFYD-----PNFV---------- 279
Query: 516 YSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVG 575
H++ GG PP ++ +PP P P+G +G M +G
Sbjct: 280 --------HEY---GGFPPDRNYRGMGPRGGMYGGG----LPPRAPRF-PYGGRG-MGMG 322
Query: 576 GPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETV 635
P G P + V +P L I G+ G + +IR+ S A I + +P+ +E +
Sbjct: 323 VSPFPPAPFGGPMQTTQVTIPNELGGTIIGKGGERINRIREESGAHI-VVEPQQPNSERI 381
Query: 636 IIISGTPEQTHAAQSLIQAFVMS 658
I ISG+ Q AQ L+Q V +
Sbjct: 382 ITISGSHAQIQTAQYLLQQCVRT 404
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 92/223 (41%), Gaps = 38/223 (17%)
Query: 173 ETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKLPT---------CALASD 223
+T +D E + + LRLLV + G ++G+GG IK++ + + C +++
Sbjct: 175 KTRDSDDEGSARGESELRLLVHQSHAGAIIGRGGYRIKELREETSTQLKVYSQCCPQSTE 234
Query: 224 EVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPL------PDHSVSSQG 277
V+QI G + + + LI + L + IP GPS P P+ G
Sbjct: 235 RVIQIIGVPEKIIACVILIINML--------KEIP--IKGPSRPYESMFYDPNFVHEYGG 284
Query: 278 AP----YATGHRDVADIHLPMPPSIPKFHESG--------VLDRPKPSPEILTFRLLCHD 325
P Y +PP P+F G + T ++ +
Sbjct: 285 FPPDRNYRGMGPRGGMYGGGLPPRAPRFPYGGRGMGMGVSPFPPAPFGGPMQTTQVTIPN 344
Query: 326 ERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
E G +IGKGG I +++E+G I V+E +R+I ISG
Sbjct: 345 ELGGTIIGKGGERINRIREESGAHI-VVEPQQPNSERIITISG 386
>gi|291394537|ref|XP_002713869.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 3
[Oryctolagus cuniculus]
Length = 517
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 109/472 (23%), Positives = 190/472 (40%), Gaps = 114/472 (24%)
Query: 39 SKSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEAS 98
SK P + R+L P + +IGK+G + I++ T I
Sbjct: 127 SKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKI------------------- 167
Query: 99 DNKKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQK 158
+ R EN G E S+ L++ + TS K
Sbjct: 168 ------------DVHRKENAGAAEKSITI-------------------LSTPEGTSAACK 196
Query: 159 ALLLVFERMVEVEPETEVADQENTKSSKFV-LRLLVLSTQVGCLLGKGGCVIKQIDK--- 214
++L + + + ++TK ++ + L++L + VG L+GK G +K+I++
Sbjct: 197 SILEIMHK-----------EAQDTKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTD 245
Query: 215 -------LPTCALASDE-VVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSH 266
L L + E + + G V+T KA + I ++ ++ D S+ +H
Sbjct: 246 TKITISPLQELTLYNPERTITVKGSVETCAKAEEEIMKKIRESYENDIASM----NLQAH 301
Query: 267 PLPDHSVSSQG--APYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCH 324
+P ++++ G P M P P +S E T L
Sbjct: 302 LIPGLNLNALGLFPPTPGMPPPTPGPPSAMAPPYPPLEQS----------ETETVHLFIP 351
Query: 325 DERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRISAPQDAV 383
VG +IGK G I+ L + G IK+ A + + R+++I+GP +A
Sbjct: 352 ALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPP----------EAQ 401
Query: 384 LRVQTRIARAIPD------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRI 437
+ Q RI I + E + + V S G ++GKGG + E++ LS A + +
Sbjct: 402 FKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEV-V 460
Query: 438 LGKDQIPKCASENEEVVL-INGEFEAVQEA---LFQITTRLRHHFFRDAFPS 485
+ +DQ P EN++VV+ I G F A Q A + +I T+++ H + A S
Sbjct: 461 VPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVKQHHQQKALQS 509
>gi|413935391|gb|AFW69942.1| hypothetical protein ZEAMMB73_108333 [Zea mays]
Length = 468
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 91/194 (46%), Gaps = 18/194 (9%)
Query: 314 PEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA--VSGTEDRLIVISGPAH 371
P FRL+ ++VGG+IG+ G I+ L ET ++V++A G R++++S
Sbjct: 95 PGASVFRLVVPADKVGGIIGRRGDTIKRLCDETRARVRVLDAPHGDGAFSRIVLVSAREE 154
Query: 372 PDDRISAPQDAVLRVQTRIARAIPDNREQTVMT--------RLLVASNQIGCLLGKGGSI 423
+ +S +A +++ I N + T+M RLLV Q ++GK G
Sbjct: 155 VEAELSPAMNAAIKIFKHINEIEDINSDGTLMAPAPEISSVRLLVPFAQALHVIGKQGVT 214
Query: 424 IAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRH------- 476
I +++ +G+ +RI+ +D++ + E +V ING V AL + LR
Sbjct: 215 IKSIQESTGSTVRIMDEDELLSHETMGERIVEINGASLEVLNALKLVLGLLRKFLVDHGV 274
Query: 477 -HFFRDAFPSINRP 489
H F P + +P
Sbjct: 275 LHLFERKNPEVAQP 288
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 75/352 (21%), Positives = 131/352 (37%), Gaps = 86/352 (24%)
Query: 42 FPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEET--VSGSDERLVVIEASD 99
+PG +FR++ P K+ G+IG+ G+ + ++ +T +RV + G+ R+V++ A
Sbjct: 94 WPGASVFRLVVPADKVGGIIGRRGDTIKRLCDETRARVRVLDAPHGDGAFSRIVLVSA-- 151
Query: 100 NKKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKA 159
REE E E S A
Sbjct: 152 --------------------REEV--------------------------EAELSPAMNA 165
Query: 160 LLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI------- 212
+ +F+ + E+E +RLLV Q ++GK G IK I
Sbjct: 166 AIKIFKHINEIEDINSDGTLMAPAPEISSVRLLVPFAQALHVIGKQGVTIKSIQESTGST 225
Query: 213 ------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIP-GNPTGPS 265
D+L + + +V+I G V ALKL+ LL DH + P
Sbjct: 226 VRIMDEDELLSHETMGERIVEINGASLEVLNALKLVL-GLLRKFLVDHGVLHLFERKNPE 284
Query: 266 HPLPDHSVSS-QGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEIL-----TF 319
P S + +G+ + GH P FH D +P+ ++ T
Sbjct: 285 VAQPQQSRGNPKGSRFLYGHD-------------PSFHAPYSRDLSQPADSLITKITRTM 331
Query: 320 RLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAH 371
++ D VG +IG G + ++ +G + + + +G E R+++ P+
Sbjct: 332 QIPLAD--VGEIIGVRGENVELIRSVSGAVVVLEKIGNGQEVRVMIEGTPSQ 381
>gi|212723546|ref|NP_001131366.1| uncharacterized protein LOC100192689 [Zea mays]
gi|194691330|gb|ACF79749.1| unknown [Zea mays]
gi|413935393|gb|AFW69944.1| hypothetical protein ZEAMMB73_108333 [Zea mays]
Length = 467
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 91/194 (46%), Gaps = 18/194 (9%)
Query: 314 PEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA--VSGTEDRLIVISGPAH 371
P FRL+ ++VGG+IG+ G I+ L ET ++V++A G R++++S
Sbjct: 95 PGASVFRLVVPADKVGGIIGRRGDTIKRLCDETRARVRVLDAPHGDGAFSRIVLVSAREE 154
Query: 372 PDDRISAPQDAVLRVQTRIARAIPDNREQTVMT--------RLLVASNQIGCLLGKGGSI 423
+ +S +A +++ I N + T+M RLLV Q ++GK G
Sbjct: 155 VEAELSPAMNAAIKIFKHINEIEDINSDGTLMAPAPEISSVRLLVPFAQALHVIGKQGVT 214
Query: 424 IAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRH------- 476
I +++ +G+ +RI+ +D++ + E +V ING V AL + LR
Sbjct: 215 IKSIQESTGSTVRIMDEDELLSHETMGERIVEINGASLEVLNALKLVLGLLRKFLVDHGV 274
Query: 477 -HFFRDAFPSINRP 489
H F P + +P
Sbjct: 275 LHLFERKNPEVAQP 288
Score = 46.2 bits (108), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 74/351 (21%), Positives = 130/351 (37%), Gaps = 85/351 (24%)
Query: 42 FPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEET--VSGSDERLVVIEASD 99
+PG +FR++ P K+ G+IG+ G+ + ++ +T +RV + G+ R+V++ A
Sbjct: 94 WPGASVFRLVVPADKVGGIIGRRGDTIKRLCDETRARVRVLDAPHGDGAFSRIVLVSA-- 151
Query: 100 NKKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKA 159
REE E E S A
Sbjct: 152 --------------------REEV--------------------------EAELSPAMNA 165
Query: 160 LLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI------- 212
+ +F+ + E+E +RLLV Q ++GK G IK I
Sbjct: 166 AIKIFKHINEIEDINSDGTLMAPAPEISSVRLLVPFAQALHVIGKQGVTIKSIQESTGST 225
Query: 213 ------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIP-GNPTGPS 265
D+L + + +V+I G V ALKL+ LL DH + P
Sbjct: 226 VRIMDEDELLSHETMGERIVEINGASLEVLNALKLVL-GLLRKFLVDHGVLHLFERKNPE 284
Query: 266 HPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEIL-----TFR 320
P + +G+ + GH P FH D +P+ ++ T +
Sbjct: 285 VAQPQSRGNPKGSRFLYGHD-------------PSFHAPYSRDLSQPADSLITKITRTMQ 331
Query: 321 LLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAH 371
+ D VG +IG G + ++ +G + + + +G E R+++ P+
Sbjct: 332 IPLAD--VGEIIGVRGENVELIRSVSGAVVVLEKIGNGQEVRVMIEGTPSQ 380
>gi|340722699|ref|XP_003399741.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
isoform 2 [Bombus terrestris]
Length = 577
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 149/319 (46%), Gaps = 36/319 (11%)
Query: 175 EVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIKQI----DKLPTCALASD----- 223
EV QE SK LR+L + +G ++GKGG IK+I D T + +D
Sbjct: 203 EVTQQEAYGLSKGEISLRILAHNNLIGRIIGKGGTTIKKIMQDTDTKITVSSINDINNFN 262
Query: 224 --EVVQITGEVDTVRKALKLISHQLLDNSPRDHESI-PGNPTGPS-HPLPDHSVSSQGAP 279
++ + G +D + KA +IS +L + D +++ P + P HP+ +S+ G
Sbjct: 263 LERIITVKGSIDNMSKAESMISSKLRQSYENDLQAMAPQSLMFPGLHPMA--MMSTAGMG 320
Query: 280 YAT---GHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGG 336
Y++ G P S+P + G+ P + F L + VG +IG G
Sbjct: 321 YSSRGPGLYGSGPAPYPYQTSLPT--QQGI---PIGDTQETAF-LYIPNTSVGAIIGSKG 374
Query: 337 AIIRSLKQETGCDIKVM-----EAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIA 391
+ IR++ + +G +K+ + V DR + I G P+ + A ++ + R
Sbjct: 375 SHIRNIIRFSGASVKIAPIEQDKPVEQQNDRKVTIVGS--PESQWKA--QYLIFEKMREE 430
Query: 392 RAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENE 451
+ + + +LV S Q+G ++GKGG + E+++++G+ I+ L + Q +++ E
Sbjct: 431 GFVGGTEDVRLTIEILVPSTQVGRIIGKGGQNVRELQRVTGSIIK-LSEQQSTSPSADEE 489
Query: 452 EVVLINGEFEAVQEALFQI 470
V I G F +VQ A +I
Sbjct: 490 ATVQIIGPFFSVQSAQRRI 508
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 138/341 (40%), Gaps = 63/341 (18%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRIS 377
R+L E VG +IG+ G+ IR + Q T + V S G ++ I I G +P++ +
Sbjct: 139 LRILVQSEMVGAIIGRQGSTIRQITQMTRARVDVHRKDSLGAAEKAITIYG--NPENCTN 196
Query: 378 APQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRI 437
A + ++ V + A + + R+L +N IG ++GKGG+ I ++ + + I +
Sbjct: 197 ACKK-IMEVTQQEAYGLSKGE---ISLRILAHNNLIGRIIGKGGTTIKKIMQDTDTKITV 252
Query: 438 LGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQ 497
+ I E ++ + G + + +A I+++LR + D + + P L
Sbjct: 253 SSINDINNF--NLERIITVKGSIDNMSKAESMISSKLRQSYENDL-----QAMAPQSL-- 303
Query: 498 VSPFPSFIGRRELSPPGM-YSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGM 556
FP +S GM YS+ GP + G P P +P ++ +
Sbjct: 304 --MFPGLHPMAMMSTAGMGYSSRGPGLY-----GSGPAP---YP-----------YQTSL 342
Query: 557 PPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQ 616
P G P +G + +P + V I G G+ ++ I +
Sbjct: 343 PTQ------------------QGIP--IGDTQETAFLYIPNTSVGAIIGSKGSHIRNIIR 382
Query: 617 ISDAKITIT-----DPKPGATETVIIISGTPEQTHAAQSLI 652
S A + I P + + I G+PE AQ LI
Sbjct: 383 FSGASVKIAPIEQDKPVEQQNDRKVTIVGSPESQWKAQYLI 423
>gi|315055291|ref|XP_003177020.1| hypothetical protein MGYG_01105 [Arthroderma gypseum CBS 118893]
gi|311338866|gb|EFQ98068.1| hypothetical protein MGYG_01105 [Arthroderma gypseum CBS 118893]
Length = 367
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/352 (22%), Positives = 147/352 (41%), Gaps = 49/352 (13%)
Query: 316 ILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDR 375
+LT R + + G +IGK G + L+ ETG V + V G DR++ ++GP +
Sbjct: 47 MLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGPLQGTSK 106
Query: 376 -ISAPQDAVLRV--QTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSG 432
S ++L Q + + +N +V RLL++ NQ+G ++G+ G I ++ SG
Sbjct: 107 AYSIVAKSLLEGAPQMGMGGVVQNNGTHSV--RLLISHNQMGTIIGRQGLKIKYIQDASG 164
Query: 433 AYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNP 492
+ + K+ +P+ E +V + G E +++A+++I L + R + NP
Sbjct: 165 VRM-VAQKEMLPQST---ERIVEVQGTPEGIEKAIWEIGKCLIDDWQRGTGTVL---YNP 217
Query: 493 TFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPP----PGSFHPHDDHSAFM 548
V P + G ++G S ++ G PGS++ ++
Sbjct: 218 AVRASVGSGPG-----QGPVAGSNPSYGGSSRSYNRTGNGADFSDHPGSYNRRGNND--- 269
Query: 549 HHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDG 608
+ +R G+P D G + + +P +V I G G
Sbjct: 270 -NPNR-GIPLVTED----------------------GEEVQTQNISIPSDMVGCIIGRGG 305
Query: 609 ACLKQIRQISDAKITITD-PKPGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
+ +IR+ S A+I+I P E + I G+ + A L+ + +E
Sbjct: 306 TKISEIRRSSGARISIAKAPHDDTGERMFTIMGSAQANEKALYLLYENLEAE 357
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 103/245 (42%), Gaps = 32/245 (13%)
Query: 158 KALLLVFERMVEVEPETEVAD--QENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKL 215
KA +V + ++E P+ + Q N S +RLL+ Q+G ++G+ G IK I
Sbjct: 106 KAYSIVAKSLLEGAPQMGMGGVVQNNGTHS---VRLLISHNQMGTIIGRQGLKIKYIQDA 162
Query: 216 PTCAL---------ASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNP----- 261
+ +++ +V++ G + + KA+ I L+D+ R ++ NP
Sbjct: 163 SGVRMVAQKEMLPQSTERIVEVQGTPEGIEKAIWEIGKCLIDDWQRGTGTVLYNPAVRAS 222
Query: 262 --TGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRP--------K 311
+GP S S G + +R P ++ G D P +
Sbjct: 223 VGSGPGQGPVAGSNPSYGGSSRSYNRTGNGADFSDHPG--SYNRRGNNDNPNRGIPLVTE 280
Query: 312 PSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA-VSGTEDRLIVISGPA 370
E+ T + + VG +IG+GG I +++ +G I + +A T +R+ I G A
Sbjct: 281 DGEEVQTQNISIPSDMVGCIIGRGGTKISEIRRSSGARISIAKAPHDDTGERMFTIMGSA 340
Query: 371 HPDDR 375
+++
Sbjct: 341 QANEK 345
>gi|328709627|ref|XP_003244018.1| PREDICTED: poly(rC)-binding protein 3-like isoform 2 [Acyrthosiphon
pisum]
Length = 525
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 21/163 (12%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RL+ + VG +IGK G I++ ++E+G I + + +R++ ISG
Sbjct: 13 LTLRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTISGSTE----- 65
Query: 377 SAPQDAVLRVQTRIARAIPDNREQTVMT---------RLLVASNQIGCLLGKGGSIIAEM 427
A A + T++ I +T T RL+V ++Q G L+GKGG+ I E+
Sbjct: 66 -AIYKAFSLICTKVEEFIEMQNGKTGATAIGKCGMTLRLIVPASQCGSLIGKGGNKIKEI 124
Query: 428 RKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
R+ +GA I++ D +P+ E V + G +++ + +F I
Sbjct: 125 REATGAQIQV-ASDVLPQ---STERAVTLTGTRDSITQCIFHI 163
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 406 LLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQE 465
+ V ++ IGC++GKGG+ IAE+R++SGA IRI + AS + + I G ++V
Sbjct: 318 MTVPNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEDREGSAS-TDRTITITGNPDSVAL 376
Query: 466 ALFQITTRL 474
A + I L
Sbjct: 377 AQYLINMSL 385
Score = 40.0 bits (92), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 7/79 (8%)
Query: 396 DNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVL 455
D+ ++ RL++ ++G ++GK G I+ R+ SGA I I S E +V
Sbjct: 7 DDSNISLTLRLIMQGKEVGSIIGKKGEIVKRFREESGAKINI-------SDGSCPERIVT 59
Query: 456 INGEFEAVQEALFQITTRL 474
I+G EA+ +A I T++
Sbjct: 60 ISGSTEAIYKAFSLICTKV 78
>gi|425769369|gb|EKV07864.1| hypothetical protein PDIP_71440 [Penicillium digitatum Pd1]
gi|425770994|gb|EKV09451.1| hypothetical protein PDIG_62050 [Penicillium digitatum PHI26]
Length = 364
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/360 (21%), Positives = 138/360 (38%), Gaps = 67/360 (18%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT R + + G +IGK G + L+ ETG V + V G DR++ ++G
Sbjct: 45 LTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTGQLR----- 99
Query: 377 SAPQDAVLRVQTRIARAIPDNREQTVM-----------TRLLVASNQIGCLLGKGGSIIA 425
++ R +A+ + + Q M RLL++ NQ+G ++G+ G I
Sbjct: 100 -----SLARAYAIVAKGLLEGAPQMGMGGIVSNNGTHPIRLLISHNQMGTIIGRQGLKIK 154
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPS 485
++ SG + + K+ +P+ E +V + G E +++A+++I L + R
Sbjct: 155 HIQDASGVRM-VAQKEMLPQST---ERIVEVQGTPEGIEKAIWEIGKCLLDDWQRGTGTV 210
Query: 486 INRPLNPTFLDQVSPFPSFIGRRELSPP---GMYSNFGPSFHKFDAVGGPPPPGSFHPHD 542
+ P L P S +PP G +N + G GS++
Sbjct: 211 LYNPAVRASLSGSQPLNS-------NPPAGNGYQNNANSRQYNRTGNGADFSDGSYNRRS 263
Query: 543 DHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFV--GPPHRRVPVVVPRSLV 600
+ A G G+P G + + +P +V
Sbjct: 264 NSDA-----------------------------GNRGYPQVTEDGEEIQTQNISIPADMV 294
Query: 601 PIIQGEDGACLKQIRQISDAKITITD-PKPGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
I G G + +IR+ S A+I+I P E + I G+ + A L+ + +E
Sbjct: 295 GCIIGRGGTKITEIRRSSGARISIAKAPHDETGERMFTIMGSAQANEKALYLLYENLEAE 354
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 89/218 (40%), Gaps = 39/218 (17%)
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQIDKLPTCAL---------ASDEVVQITGEVDTVRKAL 239
+RLL+ Q+G ++G+ G IK I + +++ +V++ G + + KA+
Sbjct: 133 IRLLISHNQMGTIIGRQGLKIKHIQDASGVRMVAQKEMLPQSTERIVEVQGTPEGIEKAI 192
Query: 240 KLISHQLLDNSPRDHESIPGNPT-----GPSHPLPD----------------HSVSSQGA 278
I LLD+ R ++ NP S PL ++ + GA
Sbjct: 193 WEIGKCLLDDWQRGTGTVLYNPAVRASLSGSQPLNSNPPAGNGYQNNANSRQYNRTGNGA 252
Query: 279 PYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAI 338
++ G + P+ E G EI T + + VG +IG+GG
Sbjct: 253 DFSDGSYNRRSNSDAGNRGYPQVTEDG--------EEIQTQNISIPADMVGCIIGRGGTK 304
Query: 339 IRSLKQETGCDIKVMEA-VSGTEDRLIVISGPAHPDDR 375
I +++ +G I + +A T +R+ I G A +++
Sbjct: 305 ITEIRRSSGARISIAKAPHDETGERMFTIMGSAQANEK 342
>gi|340722697|ref|XP_003399740.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
isoform 1 [Bombus terrestris]
Length = 627
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 149/319 (46%), Gaps = 36/319 (11%)
Query: 175 EVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIKQI----DKLPTCALASD----- 223
EV QE SK LR+L + +G ++GKGG IK+I D T + +D
Sbjct: 253 EVTQQEAYGLSKGEISLRILAHNNLIGRIIGKGGTTIKKIMQDTDTKITVSSINDINNFN 312
Query: 224 --EVVQITGEVDTVRKALKLISHQLLDNSPRDHESI-PGNPTGPS-HPLPDHSVSSQGAP 279
++ + G +D + KA +IS +L + D +++ P + P HP+ +S+ G
Sbjct: 313 LERIITVKGSIDNMSKAESMISSKLRQSYENDLQAMAPQSLMFPGLHPMA--MMSTAGMG 370
Query: 280 YAT---GHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGG 336
Y++ G P S+P + G+ P + F L + VG +IG G
Sbjct: 371 YSSRGPGLYGSGPAPYPYQTSLPT--QQGI---PIGDTQETAF-LYIPNTSVGAIIGSKG 424
Query: 337 AIIRSLKQETGCDIKVM-----EAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIA 391
+ IR++ + +G +K+ + V DR + I G P+ + A ++ + R
Sbjct: 425 SHIRNIIRFSGASVKIAPIEQDKPVEQQNDRKVTIVGS--PESQWKA--QYLIFEKMREE 480
Query: 392 RAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENE 451
+ + + +LV S Q+G ++GKGG + E+++++G+ I+ L + Q +++ E
Sbjct: 481 GFVGGTEDVRLTIEILVPSTQVGRIIGKGGQNVRELQRVTGSIIK-LSEQQSTSPSADEE 539
Query: 452 EVVLINGEFEAVQEALFQI 470
V I G F +VQ A +I
Sbjct: 540 ATVQIIGPFFSVQSAQRRI 558
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 138/341 (40%), Gaps = 63/341 (18%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRIS 377
R+L E VG +IG+ G+ IR + Q T + V S G ++ I I G +P++ +
Sbjct: 189 LRILVQSEMVGAIIGRQGSTIRQITQMTRARVDVHRKDSLGAAEKAITIYG--NPENCTN 246
Query: 378 APQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRI 437
A + ++ V + A + + R+L +N IG ++GKGG+ I ++ + + I +
Sbjct: 247 ACKK-IMEVTQQEAYGLSKGE---ISLRILAHNNLIGRIIGKGGTTIKKIMQDTDTKITV 302
Query: 438 LGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQ 497
+ I E ++ + G + + +A I+++LR + D + + P L
Sbjct: 303 SSINDINNF--NLERIITVKGSIDNMSKAESMISSKLRQSYENDL-----QAMAPQSL-- 353
Query: 498 VSPFPSFIGRRELSPPGM-YSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGM 556
FP +S GM YS+ GP + GP P +P ++ +
Sbjct: 354 --MFPGLHPMAMMSTAGMGYSSRGPGLYG----SGPAP----YP-----------YQTSL 392
Query: 557 PPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQ 616
P G P +G + +P + V I G G+ ++ I +
Sbjct: 393 PTQ------------------QGIP--IGDTQETAFLYIPNTSVGAIIGSKGSHIRNIIR 432
Query: 617 ISDAKITIT-----DPKPGATETVIIISGTPEQTHAAQSLI 652
S A + I P + + I G+PE AQ LI
Sbjct: 433 FSGASVKIAPIEQDKPVEQQNDRKVTIVGSPESQWKAQYLI 473
>gi|126336339|ref|XP_001367908.1| PREDICTED: poly(rC)-binding protein 4-like isoform 1 [Monodelphis
domestica]
Length = 410
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 144/352 (40%), Gaps = 58/352 (16%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT R++ H + VG +IGK G ++ +++++ I + E +R+ I+G
Sbjct: 18 LTLRMIMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGST--GAVF 73
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A ++ + P+ + V RL++ ++Q G L+GK G+ I E+R+ +GA
Sbjct: 74 HAVSMIAFKLDEDLCTGPPNGGSISKPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGA 133
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPT 493
+++ G D +P + E V ++G +A+ + QI + + A P +P+
Sbjct: 134 QVQVAG-DLLP---NSTERAVTVSGVPDAIILCVRQICAVILESPPKGA----TIPYHPS 185
Query: 494 F-LDQVSPFPSFIGRRELSPPGMYSNFGPS-FHKFDAVGGPPPPGSFHPHDDHSAFMHHI 551
L V + S G Y P+ K + G P P +
Sbjct: 186 LSLGTV----LLSANQGFSVQGQYGTVTPAEVSKLQQLSGHPVPFA-------------- 227
Query: 552 HRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACL 611
P +P + P E +VP L+ + G G+ +
Sbjct: 228 ----SPSVVPGLDPSAQTSSQE-------------------FLVPNDLIGCVIGRQGSKI 264
Query: 612 KQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSETETT 663
+IRQ+S A I I + G+ E + I+G+P AQ LI A + + T+
Sbjct: 265 SEIRQMSGAHIKIGNQAEGSGERHVTITGSPVSIALAQYLITACLETAKSTS 316
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 91/195 (46%), Gaps = 20/195 (10%)
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQI------------DKLPTCALASDEVVQITGEVDTVR 236
LRL++ ++Q G L+GK G IK+I D LP +++ V ++G D +
Sbjct: 104 LRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPN---STERAVTVSGVPDAII 160
Query: 237 KALKLISHQLLDNSPRDHESIPGNPT---GPSHPLPDHSVSSQGAPYATGHRDVADIHLP 293
++ I +L++ P+ +IP +P+ G + S QG +V+ +
Sbjct: 161 LCVRQICAVILESPPKG-ATIPYHPSLSLGTVLLSANQGFSVQGQYGTVTPAEVSKLQQL 219
Query: 294 MPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVM 353
+P F V+ PS + + L ++ +G VIG+ G+ I ++Q +G IK+
Sbjct: 220 SGHPVP-FASPSVVPGLDPSAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIG 278
Query: 354 EAVSGTEDRLIVISG 368
G+ +R + I+G
Sbjct: 279 NQAEGSGERHVTITG 293
>gi|291409711|ref|XP_002721142.1| PREDICTED: poly(rC) binding protein 2-like isoform 1 [Oryctolagus
cuniculus]
Length = 362
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 88/157 (56%), Gaps = 11/157 (7%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTNAIFKA 71
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I+ ++ ++ + V RL+V ++Q G L+GKGG I E+R+ +GA
Sbjct: 72 FAM--IIDKLEEDISSSMTNSTAASRPLVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
+++ G D +P + E + I G +++ E + I
Sbjct: 130 QVQVAG-DMLP---NSTERAITIAGIPQSIIECVKHI 162
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 116/283 (40%), Gaps = 74/283 (26%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T +S+ LRL+V ++Q G L+GKGGC IK
Sbjct: 65 TNAIFKAFAMIIDKL---EEDISSSMTNSTAASRPLVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPR------ 252
+I D LP +++ + I G ++ + +K I +L++ P+
Sbjct: 122 EIRESTGAQVQVAGDMLPN---STERAITIAGIPQSIIECVKHICVVMLESPPKGVTIPY 178
Query: 253 ----------------------DHESIPG-------NPTGPSHPLPDHSVSSQGAPYATG 283
D S P NP PL +++ Q YA
Sbjct: 179 RPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQ---YAIP 235
Query: 284 HRDVADIH-LPMPPS-IPKFH-ESGVLDRPKPSPEILTF-------------RLLCHDER 327
D+ +H L + S P H +G SPE+ + L ++
Sbjct: 236 QPDLTKLHQLAVQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDL 295
Query: 328 VGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPA 370
+G +IG GA I + Q +G IK+ V G+ DR + I+G A
Sbjct: 296 IGCIIGCQGAKINEICQMSGALIKIANTVEGSTDRQVTITGSA 338
Score = 38.9 bits (89), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%)
Query: 593 VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLI 652
+ +P L+ I G GA + +I Q+S A I I + G+T+ + I+G+ AQ LI
Sbjct: 289 LTIPNDLIGCIIGCQGAKINEICQMSGALIKIANTVEGSTDRQVTITGSAASISLAQYLI 348
Query: 653 QAFVMSET 660
+ SET
Sbjct: 349 NVRLSSET 356
>gi|158293685|ref|XP_557579.3| AGAP004942-PA [Anopheles gambiae str. PEST]
gi|157016566|gb|EAL40201.3| AGAP004942-PA [Anopheles gambiae str. PEST]
Length = 382
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 83/165 (50%), Gaps = 27/165 (16%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RL+ + VG +IGK G I++ ++E+G I + + +R++ +SG
Sbjct: 22 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDC--SCPERIVTVSGS------- 72
Query: 377 SAPQDAVLRVQTRIARAIPDNREQ-----------TVMTRLLVASNQIGCLLGKGGSIIA 425
+ A+ + T I + + Q + RL+V ++Q G L+GKGGS I
Sbjct: 73 ---RSAIYKAFTLITKKFEEWCSQFQDNANTQGKPQIPIRLIVPASQCGSLIGKGGSKIK 129
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
E+R+++G I++ + +P + E V ++G EA+ + ++ I
Sbjct: 130 EIREITGCSIQV-ASEMLP---NSTERAVTLSGSAEAITQCIYHI 170
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 123/294 (41%), Gaps = 62/294 (21%)
Query: 154 SKVQKALLLVFERMVEVEPETEVADQENTKSS-KFVLRLLVLSTQVGCLLGKGGCVIKQI 212
S + KA L+ ++ E ++ D NT+ + +RL+V ++Q G L+GKGG IK+I
Sbjct: 74 SAIYKAFTLITKKFEEWC--SQFQDNANTQGKPQIPIRLIVPASQCGSLIGKGGSKIKEI 131
Query: 213 DKLPTCAL---------ASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNP-- 261
++ C++ +++ V ++G + + + + I +L++ P+ +IP P
Sbjct: 132 REITGCSIQVASEMLPNSTERAVTLSGSAEAITQCIYHICCVMLESPPKG-ATIPYRPKP 190
Query: 262 --TGPSHPLPDHSVSSQGAPYATGHRDVADI-------------HLPMPPSIPKFHESGV 306
GP + + QG YA ++V+ I +P + + +G
Sbjct: 191 QVNGPVIVANGQAYTIQGN-YAVPAQEVSGIAKNPLAGLAALGLAGAIPSNTGGLNPTGK 249
Query: 307 LDRPK-----PSPEILTF---RLLCHDER------------------VGGVIGKGGAIIR 340
P P + +L ++ R +G +IGKGG I
Sbjct: 250 YSSPNALEYIPHAALAALAGSQLRTNNNRNVAPVQSQSHEMTVPNDLIGCIIGKGGTKIA 309
Query: 341 SLKQETGCDIKVM---EAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIA 391
++Q +G I++ E SG DR I I+G +PD A +R+ A
Sbjct: 310 EIRQISGAMIRISNCEERDSGNTDRTITITG--NPDSVALAQYLINMRISMETA 361
Score = 45.8 bits (107), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 406 LLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQE 465
+ V ++ IGC++GKGG+ IAE+R++SGA IRI ++ + + + + I G ++V
Sbjct: 290 MTVPNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEE--RDSGNTDRTITITGNPDSVAL 347
Query: 466 ALFQITTRL 474
A + I R+
Sbjct: 348 AQYLINMRI 356
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 593 VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPK---PGATETVIIISGTPEQTHAAQ 649
+ VP L+ I G+ G + +IRQIS A I I++ + G T+ I I+G P+ AQ
Sbjct: 290 MTVPNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEERDSGNTDRTITITGNPDSVALAQ 349
Query: 650 SLIQAFVMSET 660
LI + ET
Sbjct: 350 YLINMRISMET 360
>gi|324516472|gb|ADY46541.1| Poly(rC)-binding protein 3 [Ascaris suum]
Length = 360
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 81/149 (54%), Gaps = 10/149 (6%)
Query: 316 ILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDR 375
ILT RLL + VG +IGK G I+S++ +G I + + +R++ I+G D
Sbjct: 22 ILTIRLLMQGKEVGSIIGKRGDHIKSIRDGSGAKINISDG--SCPERIVTITGNV---DT 76
Query: 376 ISAPQDAVLRVQTRIARAIPDNREQTVMT-RLLVASNQIGCLLGKGGSIIAEMRKLSGAY 434
I+ + +A+P++ + +T RL+V + Q G L+GKGGS I E+R+ +GA
Sbjct: 77 INKAFSMICNKFQEDMQALPNSVPKPPITMRLIVPATQCGSLIGKGGSKIKEIREATGAS 136
Query: 435 IRILGKDQIPKCASENEEVVLINGEFEAV 463
I++ + +P S E V I+G +A+
Sbjct: 137 IQV-ASEMLP---SSTERAVTISGSADAI 161
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 78/191 (40%), Gaps = 62/191 (32%)
Query: 187 FVLRLLVLSTQVGCLLGKGGCVIKQIDKLPTCAL------ASDEVVQITGEVDTVRKALK 240
+RLL+ +VG ++GK G IK I + + +V ITG VDT+ KA
Sbjct: 23 LTIRLLMQGKEVGSIIGKRGDHIKSIRDGSGAKINISDGSCPERIVTITGNVDTINKAFS 82
Query: 241 LISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPK 300
+I ++ + D +++P + +P PP
Sbjct: 83 MICNKFQE----DMQALPNS-------------------------------VPKPP---- 103
Query: 301 FHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVM-EAVSGT 359
+T RL+ + G +IGKGG+ I+ +++ TG I+V E + +
Sbjct: 104 ----------------ITMRLIVPATQCGSLIGKGGSKIKEIREATGASIQVASEMLPSS 147
Query: 360 EDRLIVISGPA 370
+R + ISG A
Sbjct: 148 TERAVTISGSA 158
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 9/75 (12%)
Query: 187 FVLRLLVLSTQVGCLLGKGGCVIKQIDKLPTCAL---------ASDEVVQITGEVDTVRK 237
+RL+V +TQ G L+GKGG IK+I + ++ +++ V I+G D +
Sbjct: 104 ITMRLIVPATQCGSLIGKGGSKIKEIREATGASIQVASEMLPSSTERAVTISGSADAIVL 163
Query: 238 ALKLISHQLLDNSPR 252
++ I H LL+ P+
Sbjct: 164 CMQHICHILLEAPPK 178
>gi|256083127|ref|XP_002577801.1| heterogeneous nuclear ribonucleoprotein [Schistosoma mansoni]
gi|353230297|emb|CCD76468.1| putative heterogeneous nuclear ribonucleoprotein k [Schistosoma
mansoni]
Length = 363
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 85/371 (22%), Positives = 141/371 (38%), Gaps = 56/371 (15%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISA 378
R L + G +IGKGG I+ +++E +KV S +R++V+ G
Sbjct: 11 LRFLISTKAAGVIIGKGGENIKKIREEY--SVKVTIPDSNGPERVLVLDGDL-------- 60
Query: 379 PQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRIL 438
+V+ + + NR+ V RLLV +Q GC++G+ G I E+R+ SG +
Sbjct: 61 --GSVIEIFRENLEKMQSNRDDGVDLRLLVHQSQAGCVIGRAGYKIKELREQSGLHTL-- 116
Query: 439 GKDQIPKCASENEEVVLINGEFEAVQEALFQITTRL---------RHHFFRDAFPSINRP 489
K C + V+ + G+ V + L I L +++ R+A I+
Sbjct: 117 -KVYQMLCPCSTDRVIQLVGDVGKVLDCLRSIAELLEGAPPKGSRQNYDARNADEFISPE 175
Query: 490 LNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKF-DAVGGPPPPGSFHPHDDHSAFM 548
+ P + + R Y P + + G G+ + + +
Sbjct: 176 YGGWGVGNQGPGLNLVRSRNNVANTSY----PHNNILTTGIFGGGASGATGRNGGQTTSV 231
Query: 549 HHIHRPGMPPHMPDMKPWGPQGLMEVGGP----------------------MGFPDFVG- 585
G+ PH G GGP G P+ +
Sbjct: 232 SQALAGGL-PHASAAAMLAATGGQTTGGPNPGTAGDAAAATAAAMVAAGLMRGLPNRMAM 290
Query: 586 ---PPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTP 642
P V V ++ I G G + Q+R S+A I I+ +PG + +I I+GTP
Sbjct: 291 SILTPTTSTQVSVSNKMIGAIMGRSGCRINQVRHESNADIKISKQEPGVEDRIITITGTP 350
Query: 643 EQTHAAQSLIQ 653
EQ AQ L+Q
Sbjct: 351 EQIQNAQFLLQ 361
Score = 42.4 bits (98), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 123/304 (40%), Gaps = 53/304 (17%)
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQIDK---LPT-------CALASDEVVQITGEVDTVRKA 238
LRLLV +Q GC++G+ G IK++ + L T C ++D V+Q+ G+V V
Sbjct: 84 LRLLVHQSQAGCVIGRAGYKIKELREQSGLHTLKVYQMLCPCSTDRVIQLVGDVGKVLDC 143
Query: 239 LKLISHQLLDNSPRDHESIPGNPTGPSHPL----PDHSVSSQGAPYATGHRDVADIHLPM 294
L+ I+ +LL+ +P P G D +S + + G++
Sbjct: 144 LRSIA-ELLEGAP---------PKGSRQNYDARNADEFISPEYGGWGVGNQG-------- 185
Query: 295 PPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDI---- 350
P + V + P ILT + G G+ G S+ Q +
Sbjct: 186 PGLNLVRSRNNVANTSYPHNNILTTGIFGGG--ASGATGRNGGQTTSVSQALAGGLPHAS 243
Query: 351 -KVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVM-----T 404
M A +G + GP +A A V + R +P+ +++ T
Sbjct: 244 AAAMLAATGGQ----TTGGPNPGTAGDAAAATAAAMVAAGLMRGLPNRMAMSILTPTTST 299
Query: 405 RLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQ 464
++ V++ IG ++G+ G I ++R S A I+I Q P + ++ I G E +Q
Sbjct: 300 QVSVSNKMIGAIMGRSGCRINQVRHESNADIKI--SKQEPGV---EDRIITITGTPEQIQ 354
Query: 465 EALF 468
A F
Sbjct: 355 NAQF 358
>gi|324519086|gb|ADY47282.1| Poly(rC)-binding protein 3 [Ascaris suum]
Length = 342
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 81/149 (54%), Gaps = 10/149 (6%)
Query: 316 ILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDR 375
ILT RLL + VG +IGK G I+S++ +G I + + +R++ I+G D
Sbjct: 22 ILTIRLLMQGKEVGSIIGKRGDHIKSIRDGSGAKINISDG--SCPERIVTITGNV---DT 76
Query: 376 ISAPQDAVLRVQTRIARAIPDNREQTVMT-RLLVASNQIGCLLGKGGSIIAEMRKLSGAY 434
I+ + +A+P++ + +T RL+V + Q G L+GKGGS I E+R+ +GA
Sbjct: 77 INKAFSMICNKFQEDMQALPNSVPKPPITMRLIVPATQCGSLIGKGGSKIKEIREATGAS 136
Query: 435 IRILGKDQIPKCASENEEVVLINGEFEAV 463
I++ + +P S E V I+G +A+
Sbjct: 137 IQV-ASEMLP---SSTERAVTISGSADAI 161
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 78/191 (40%), Gaps = 62/191 (32%)
Query: 187 FVLRLLVLSTQVGCLLGKGGCVIKQIDKLPTCAL------ASDEVVQITGEVDTVRKALK 240
+RLL+ +VG ++GK G IK I + + +V ITG VDT+ KA
Sbjct: 23 LTIRLLMQGKEVGSIIGKRGDHIKSIRDGSGAKINISDGSCPERIVTITGNVDTINKAFS 82
Query: 241 LISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPK 300
+I ++ + D +++P + +P PP
Sbjct: 83 MICNKFQE----DMQALPNS-------------------------------VPKPP---- 103
Query: 301 FHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVM-EAVSGT 359
+T RL+ + G +IGKGG+ I+ +++ TG I+V E + +
Sbjct: 104 ----------------ITMRLIVPATQCGSLIGKGGSKIKEIREATGASIQVASEMLPSS 147
Query: 360 EDRLIVISGPA 370
+R + ISG A
Sbjct: 148 TERAVTISGSA 158
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 9/75 (12%)
Query: 187 FVLRLLVLSTQVGCLLGKGGCVIKQIDKLPTCAL---------ASDEVVQITGEVDTVRK 237
+RL+V +TQ G L+GKGG IK+I + ++ +++ V I+G D +
Sbjct: 104 ITMRLIVPATQCGSLIGKGGSKIKEIREATGASIQVASEMLPSSTERAVTISGSADAIVL 163
Query: 238 ALKLISHQLLDNSPR 252
++ I H LL+ P+
Sbjct: 164 CMQHICHILLEAPPK 178
>gi|345566886|gb|EGX49826.1| hypothetical protein AOL_s00076g710 [Arthrobotrys oligospora ATCC
24927]
Length = 379
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 143/362 (39%), Gaps = 61/362 (16%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT R + + G +IGK G + L+ ETG V + V G DR++ ++G
Sbjct: 49 LTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTGNL------ 102
Query: 377 SAPQDAVLRVQTRIAR--------AIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMR 428
D V + +A+ AIP T RLL++ NQ+G ++G+ G I ++
Sbjct: 103 ----DGVAKAYAMVAQTLVDSPPGAIPTTPMGTHPVRLLISHNQMGTIIGRQGLKIKHIQ 158
Query: 429 KLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINR 488
+SG + + K+ +P+ E +V + G + +++A+++I L + R +
Sbjct: 159 DVSGVRM-VAQKEMLPQST---ERIVEVQGSADGIRQAIWEIGKCLVDDWQRGTGTIL-- 212
Query: 489 PLNPTFLDQVS----PFPSFI---GRRELSPPGMYSNFGPSFHKFDAVGG---PPPPGSF 538
NP S PS I G P ++N P+ G P SF
Sbjct: 213 -YNPAVRSNTSHGTGSSPSVISNGGAGTSGPTDRFTNERPNRGPVRTGNGTDFSEPSPSF 271
Query: 539 HPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRS 598
P HS P P+ + + Q + +P
Sbjct: 272 -PRRGHSDSTSRASAPA--PNTENGEELQTQN----------------------ISIPAD 306
Query: 599 LVPIIQGEDGACLKQIRQISDAKITITD-PKPGATETVIIISGTPEQTHAAQSLIQAFVM 657
+V I G G+ + +IR+ S A+I+I P E + I G+P+ A L+ +
Sbjct: 307 MVGCIIGRGGSKISEIRKSSGARISIAKAPHDDTGERMFTIVGSPQSNEKALYLLYENLE 366
Query: 658 SE 659
+E
Sbjct: 367 AE 368
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 127/300 (42%), Gaps = 43/300 (14%)
Query: 176 VADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI-DKLPTCALAS-------DEVVQ 227
V E+ S LR +V S + G ++GK G + + D+ A S D V+
Sbjct: 38 VRTDEDYAQSPLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLT 97
Query: 228 ITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHP---LPDHS-----VSSQGAP 279
+TG +D V KA +++ L+D+ P +IP P G +HP L H+ + QG
Sbjct: 98 VTGNLDGVAKAYAMVAQTLVDSPP---GAIPTTPMG-THPVRLLISHNQMGTIIGRQGLK 153
Query: 280 Y-----ATGHRDVADIHLPMPPSIPKFHE-SGVLDRPKPSPEILTFRLLCHDERVGGVIG 333
+G R VA + +P S + E G D + + + L+ +R G I
Sbjct: 154 IKHIQDVSGVRMVAQKEM-LPQSTERIVEVQGSADGIRQAIWEIGKCLVDDWQRGTGTIL 212
Query: 334 KGGAIIRSLKQETGCDIKVME----AVSGTEDRLI----------VISGPAHPDDRISAP 379
A+ + TG V+ SG DR +G + S P
Sbjct: 213 YNPAVRSNTSHGTGSSPSVISNGGAGTSGPTDRFTNERPNRGPVRTGNGTDFSEPSPSFP 272
Query: 380 QDAVLRVQTRIARAIPD--NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRI 437
+ +R + P+ N E+ + + ++ +GC++G+GGS I+E+RK SGA I I
Sbjct: 273 RRGHSDSTSRASAPAPNTENGEELQTQNISIPADMVGCIIGRGGSKISEIRKSSGARISI 332
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 104/256 (40%), Gaps = 40/256 (15%)
Query: 156 VQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKL 215
V KA +V + +V+ P T +RLL+ Q+G ++G+ G IK I +
Sbjct: 105 VAKAYAMVAQTLVDSPP----GAIPTTPMGTHPVRLLISHNQMGTIIGRQGLKIKHIQDV 160
Query: 216 PTCAL---------ASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNP---TG 263
+ +++ +V++ G D +R+A+ I L+D+ R +I NP +
Sbjct: 161 SGVRMVAQKEMLPQSTERIVEVQGSADGIRQAIWEIGKCLVDDWQRGTGTILYNPAVRSN 220
Query: 264 PSHPLPDH-SVSSQGAPYATGHRDV----------------ADIHLPMPPSIPKFHESGV 306
SH SV S G +G D D P P + H
Sbjct: 221 TSHGTGSSPSVISNGGAGTSGPTDRFTNERPNRGPVRTGNGTDFSEPSPSFPRRGHSDST 280
Query: 307 LDRPKPSP------EILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA-VSGT 359
P+P E+ T + + VG +IG+GG+ I +++ +G I + +A T
Sbjct: 281 SRASAPAPNTENGEELQTQNISIPADMVGCIIGRGGSKISEIRKSSGARISIAKAPHDDT 340
Query: 360 EDRLIVISGPAHPDDR 375
+R+ I G +++
Sbjct: 341 GERMFTIVGSPQSNEK 356
>gi|194222666|ref|XP_001498933.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 1 [Equus caballus]
Length = 620
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 143/344 (41%), Gaps = 57/344 (16%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV-MEAVSGTEDRLIVISGPAHPDDRIS 377
R+L + VG +IGK G I+++ ++T + + + SG ++ + I A P+
Sbjct: 217 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIH--ATPEGTSE 274
Query: 378 APQDAVLRV------QTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLS 431
A + +L + +T++A IP ++L + +G L+GK G + ++ +
Sbjct: 275 ACR-MILEIMQKEADETKLAEEIP--------LKILAHNGLVGRLIGKEGRNLKKIEHET 325
Query: 432 GAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLN 491
G I I + E + + G EA A +I +LR F D ++N+ N
Sbjct: 326 GTKITISSLQDL--SIYNPERTITVKGTVEACANAEIEIMKKLREAFENDML-AVNQQAN 382
Query: 492 PTFLDQVSPFPSF-IGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHH 550
+S F G L PP GP G PP +HP HS +
Sbjct: 383 LIPGLNLSALGIFSTGLSMLPPPA-----GPR--------GVPPAPPYHPFATHSGYFSS 429
Query: 551 IHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRR-VPVVVPRSLVPIIQGEDGA 609
++ PPH + P FP P + V + +P V I G+ GA
Sbjct: 430 LY----PPHQ-----FSP-----------FPHHHSYPEQEIVNLFIPTQAVGAIIGKKGA 469
Query: 610 CLKQIRQISDAKITITDPK-PGATETVIIISGTPEQTHAAQSLI 652
+KQ+ + + A I I + P +E ++II+G PE AQ I
Sbjct: 470 HIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI 513
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 116/504 (23%), Positives = 196/504 (38%), Gaps = 132/504 (26%)
Query: 14 DDNHTEPNGKEKSQKLAGDYSENQPSKSFPGG--------IMFRVLCPVSKIDGVIGKDG 65
D+ + P +++Q+ GD+S + + PGG R+L P + +IGK+G
Sbjct: 178 DEEVSSPPPPQRAQR--GDHSSREQGHA-PGGSSQARQIDFPLRILVPTQFVGAIIGKEG 234
Query: 66 EMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASV 125
+ I++ T + I R EN+G E V
Sbjct: 235 LTIKNITKQTQSRV-------------------------------DIHRKENSGAAEKPV 263
Query: 126 ADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSS 185
+ EG+ +A ++ E M + ET++A++
Sbjct: 264 TIHA-------TPEGT---------------SEACRMILEIMQKEADETKLAEE------ 295
Query: 186 KFVLRLLVLSTQVGCLLGKGGCVIKQID-----KLPTCALAS------DEVVQITGEVDT 234
L++L + VG L+GK G +K+I+ K+ +L + + + G V+
Sbjct: 296 -IPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEA 354
Query: 235 VRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQG--------APYATGHRD 286
A I +L + D ++ ++ +P ++S+ G P G R
Sbjct: 355 CANAEIEIMKKLREAFENDMLAV----NQQANLIPGLNLSALGIFSTGLSMLPPPAGPRG 410
Query: 287 VADIHLPMPPSIPKFHESGVLDRPKP------------SPEILTFRLLCHDERVGGVIGK 334
V P PP P SG P PE L + VG +IGK
Sbjct: 411 VP----PAPPYHPFATHSGYFSSLYPPHQFSPFPHHHSYPEQEIVNLFIPTQAVGAIIGK 466
Query: 335 GGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARA 393
GA I+ L + G IK+ A +R+++I+GP +A + Q RI
Sbjct: 467 KGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPP----------EAQFKAQGRIFGK 516
Query: 394 IPD------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCA 447
+ + E + + V S+ G ++GKGG + E++ L+ A + I+ +DQ P
Sbjct: 517 LKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP--- 572
Query: 448 SENEEVVL-INGEFEAVQEALFQI 470
ENEEV++ I G F A Q A +I
Sbjct: 573 DENEEVIVRIIGHFFASQTAQRKI 596
>gi|349576607|dbj|GAA21778.1| K7_Pbp2p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 413
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 87/387 (22%), Positives = 143/387 (36%), Gaps = 80/387 (20%)
Query: 302 HESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTED 361
H D P P + R+LC + ++G GA I +K ET I + + G +
Sbjct: 52 HSDNDHDSPDNVPSDVHLRMLCLVKHASLIVGHKGATISRIKSETSARINISNNIRGVPE 111
Query: 362 RLIVISGPAHPDDRISAPQDAVLRVQTRIARAI------PDNREQT-VMTRLLVASNQIG 414
R++ + G D V + I RA+ DN E + LL+ + +G
Sbjct: 112 RIVYVRGTC----------DDVAKAYGMIVRALLEEHGNEDNGEDIEISINLLIPHHLMG 161
Query: 415 CLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRL 474
C++GK GS + E+ LS A + +Q+ N+ ++ ING +A+ A F I+ L
Sbjct: 162 CIIGKRGSRLREIEDLSAAKL-FASPNQL---LLSNDRILTINGVPDAIHIATFYISQTL 217
Query: 475 RHHFFRDAFPSINRPL-------NPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFD 527
+ ++ R + N +D P F R
Sbjct: 218 LNFQMESPQKNVKRSIYYQPTQFNSVLIDHSQPNTIFHQRNH------------------ 259
Query: 528 AVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQ-GLMEVGGPMGF-PDFVG 585
+HP D + + +P + PQ V F P+FV
Sbjct: 260 ---------QYHPSD---KLLSYKPNKNLPISSTLLSMATPQYTTASVANATAFQPNFVI 307
Query: 586 PPHRRV--PVVVP----RSLVPIIQ--------------GEDGACLKQIRQISDAKITIT 625
P + PV+ P L+ +Q G+DG + +++ + I I
Sbjct: 308 PNVTVLDGPVISPAPGNHLLMNFVQQEIFIDEKFVGNVIGKDGKHINSVKESTGCSIIIQ 367
Query: 626 DPKPGATETVIIISGTPEQTHAAQSLI 652
DP G++E + I GT + AA LI
Sbjct: 368 DPVEGSSERRLTIRGTFMASQAAIMLI 394
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 121/292 (41%), Gaps = 73/292 (25%)
Query: 156 VQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKL 215
V KA ++ ++E E +++N + + + LL+ +GC++GK G +++I+ L
Sbjct: 123 VAKAYGMIVRALLE-----EHGNEDNGEDIEISINLLIPHHLMGCIIGKRGSRLREIEDL 177
Query: 216 PTCAL---------ASDEVVQITGEVDTVRKALKLISHQLLD---NSPRDH--ESIPGNP 261
L ++D ++ I G D + A IS LL+ SP+ + SI P
Sbjct: 178 SAAKLFASPNQLLLSNDRILTINGVPDAIHIATFYISQTLLNFQMESPQKNVKRSIYYQP 237
Query: 262 TGPSHPLPDHSVSSQGAPYATGHRDVADIH-------------LPMPPSI-----PKFHE 303
T + L DHS P H+ H LP+ ++ P++
Sbjct: 238 TQFNSVLIDHS-----QPNTIFHQRNHQYHPSDKLLSYKPNKNLPISSTLLSMATPQYTT 292
Query: 304 SGV-----------------LDRPKPSPE-----ILTF---RLLCHDERVGGVIGKGGAI 338
+ V LD P SP ++ F + ++ VG VIGK G
Sbjct: 293 ASVANATAFQPNFVIPNVTVLDGPVISPAPGNHLLMNFVQQEIFIDEKFVGNVIGKDGKH 352
Query: 339 IRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRI 390
I S+K+ TGC I + + V G+ +R + I G A Q A++ + +I
Sbjct: 353 INSVKESTGCSIIIQDPVEGSSERRLTIRGT------FMASQAAIMLISNKI 398
>gi|410074879|ref|XP_003955022.1| hypothetical protein KAFR_0A04520 [Kazachstania africana CBS 2517]
gi|372461604|emb|CCF55887.1| hypothetical protein KAFR_0A04520 [Kazachstania africana CBS 2517]
Length = 469
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 91/413 (22%), Positives = 165/413 (39%), Gaps = 109/413 (26%)
Query: 44 GGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKE 103
I+ R+LC V + ++G GE +S++ +DT I V + + G ER++ ++ S +
Sbjct: 94 NSIILRMLCLVKEASLIVGPKGETISKMKKDTNCRINVSKNIKGVPERVIYVKGSCDNVA 153
Query: 104 TSENLEASIE---------RSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETS 154
+ L I S+N RE + DE+ +G+N+ +
Sbjct: 154 KAFGLLVRILSQKKTFYNGSSQNQERESQTDLDEN---------------NGINANEIKL 198
Query: 155 KVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDK 214
+K+ +L + P T L LL+ +G ++GK G +K+I++
Sbjct: 199 TEKKSPILYY-------PAT--------------LHLLIPHHLMGYVIGKHGSRLKEIEE 237
Query: 215 LPTCAL---------ASDEVVQITGEVDTVRKALKLISHQLL--DNSPRDHESIPGNPTG 263
L + L ++D +++ITG D + A I+ + + R +++I P G
Sbjct: 238 LSSAKLIASPHQLLPSNDRILRITGVPDAIHIATFYIAQTFMGFKDVLRTNKAIFYQP-G 296
Query: 264 PSHPLPDHSVSSQGA-------------PYATGHRD----VADIHLPMP-PSIPKF--HE 303
P + + + SQ A Y +R A + +P P+IP++ +E
Sbjct: 297 PVYTVLGTNNYSQVAVLPLRQNNYHYMNRYNNNYRHRRSPKASLMAMVPSPTIPQYTSNE 356
Query: 304 SGVLDRPKPSPEILTF--------------------------RLLCHDERVGGVIGKGGA 337
V P+ +F + + VG +IGK G
Sbjct: 357 LQVTYTPESVANATSFVPKFTIPHVRIVENTMASQPMALVEQEIYINSNYVGNIIGKEGK 416
Query: 338 IIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRI 390
I S+K+ TGC I + V G+++R I I G A Q A++ + +I
Sbjct: 417 HITSIKETTGCSIFIDSPVEGSKERKITIKGSA------MGTQAAIMIISNKI 463
>gi|395752934|ref|XP_002830848.2| PREDICTED: poly(rC)-binding protein 3 [Pongo abelii]
Length = 432
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 78/154 (50%), Gaps = 27/154 (17%)
Query: 328 VGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQ 387
VG +IGK G ++ +++E+G I + E +R++ I+GP DA+ +
Sbjct: 55 VGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT----------DAIFKAF 102
Query: 388 TRIARAI-----------PDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIR 436
IA P + V RL+V ++Q G L+GKGGS I E+R+ +GA ++
Sbjct: 103 AMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQ 162
Query: 437 ILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
+ G D +P + E V I+G +A+ + + QI
Sbjct: 163 VAG-DMLP---NSTERAVTISGTPDAIIQCVKQI 192
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 75/165 (45%), Gaps = 27/165 (16%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI 212
T + KA ++ + E + +++ T LRL+V ++Q G L+GKGG IK+I
Sbjct: 95 TDAIFKAFAMIAYKFEE-DIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 153
Query: 213 ------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGN 260
D LP +++ V I+G D + + +K I +L++ P+ +IP
Sbjct: 154 RESTGAQVQVAGDMLPN---STERAVTISGTPDAIIQCVKQICVVMLESPPKG-ATIPYR 209
Query: 261 PTGPSHPL---PDHSVSSQGAPYATGHRDVADIH------LPMPP 296
P S P+ + + QG YA H D+ +H P PP
Sbjct: 210 PKPASTPVIFAGGQAYTIQGQ-YAIPHPDLTKLHQLAMQQTPFPP 253
>gi|226292229|gb|EEH47649.1| Poly(rC)-binding protein [Paracoccidioides brasiliensis Pb18]
Length = 495
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 144/371 (38%), Gaps = 48/371 (12%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISA 378
R + IGKGG + +++ +G V + G +R++ +SG
Sbjct: 139 IRAVISSAEAATCIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGM--------- 189
Query: 379 PQDAVLRVQTRIARAIPDN--------REQTVMTRLLVASNQIGCLLGKGGSIIAEMRKL 430
QDAV + I R + + + +T RLL+ IG ++GK G I E+++
Sbjct: 190 -QDAVAKAFGLIIRTLNNEPLEAPSTAQSKTYPLRLLIPHLLIGSIIGKSGVRIREIQEA 248
Query: 431 SGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRD--------- 481
SGA R+ D ++E ++L G +AV A + + L
Sbjct: 249 SGA--RLNASDSCLPLSTERTLIIL--GVADAVHIATYYVAVTLVEQLTERFGGPAASAY 304
Query: 482 AFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPH 541
A S QV P+ + P + P + + GG P
Sbjct: 305 ATRSGGPAGVVPGGMQVVPYIPQPAGGQYGHPDTFKRHQPQGTRAVSTGGYGVPYVHGQP 364
Query: 542 DDHSAFMHHIH-----RPGMP---PHMPDMKPWG-PQGLMEVGGPMGFPDFVGPPHRRVP 592
+H RPG PH P P+G PQ G P P VG P
Sbjct: 365 GQPQMPQQALHYGASSRPGYTGAGPHQPS--PYGAPQQSQVHGAPSSQP--VGGVVPGAP 420
Query: 593 VV----VPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAA 648
V +P +V I G+ GA + +IR +S + I I +P+ + E ++ I+GTPE A
Sbjct: 421 VTQQIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQDNSNERLVTITGTPECNQMA 480
Query: 649 QSLIQAFVMSE 659
++ + + SE
Sbjct: 481 LYMLYSRLESE 491
Score = 39.7 bits (91), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 32/52 (61%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
+T ++ ++ VG +IGKGGA I ++ +G IK+ E + +RL+ I+G
Sbjct: 421 VTQQIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQDNSNERLVTITG 472
>gi|409083451|gb|EKM83808.1| hypothetical protein AGABI1DRAFT_117279 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 340
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 141/359 (39%), Gaps = 73/359 (20%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT R L + G +IGK G + L+++TG V + + G +R++ +SG +
Sbjct: 25 LTLRALVSTKDAGVIIGKAGKNVADLREQTGVKAGVSKVIPGVHERVLTVSGS------V 78
Query: 377 SAPQDAVLRVQTRIARAIPD----NREQTVMT--RLLVASNQIGCLLGKGGSIIAEMRKL 430
A A + T++ A P + TV T RLL++ N +G ++G+ G I ++
Sbjct: 79 DAVAKAYTLIITQLVTASPASPVVSSPSTVHTSIRLLISHNLMGTIIGRNGLKIKAIQDN 138
Query: 431 SGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPL 490
SGA + + K+ +P+ E +V + G EA+ A+ +I L + R +
Sbjct: 139 SGARM-VASKEMLPQS---TERIVEVQGAPEAIGRAVEEIGKCLLEDWERGLGTVL---F 191
Query: 491 NPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMH- 549
+P +D D GG GS+ + A
Sbjct: 192 HPGTVD------------------------------DRSGGNRRQGSYSASPQYGAQRRA 221
Query: 550 ----HIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPH--RRVPVVVPRSLVPII 603
++ PP P P Q PP R + +P +V I
Sbjct: 222 NGDGNVRARASPPASPTHSPISSQ----------------PPANLRTQNISIPSDMVGCI 265
Query: 604 QGEDGACLKQIRQISDAKITITD-PKPGATETVIIISGTPEQTHAAQSLIQAFVMSETE 661
G G + +IR++S +KI+I P E + I GTPE A L+ + SE E
Sbjct: 266 IGRSGTKITEIRRLSGSKISIAKAPHDETGERMFTIVGTPEANEKALFLLYNQLESEKE 324
>gi|398365639|ref|NP_009792.3| Pbp2p [Saccharomyces cerevisiae S288c]
gi|586350|sp|P38151.1|PBP2_YEAST RecName: Full=PAB1-binding protein 2
gi|536633|emb|CAA85196.1| unnamed protein product [Saccharomyces cerevisiae]
gi|151946618|gb|EDN64840.1| pbp1p binding protein [Saccharomyces cerevisiae YJM789]
gi|190408618|gb|EDV11883.1| PAB1-binding protein 2 [Saccharomyces cerevisiae RM11-1a]
gi|207347516|gb|EDZ73659.1| YBR233Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256272922|gb|EEU07890.1| Pbp2p [Saccharomyces cerevisiae JAY291]
gi|285810563|tpg|DAA07348.1| TPA: Pbp2p [Saccharomyces cerevisiae S288c]
gi|323310022|gb|EGA63217.1| Pbp2p [Saccharomyces cerevisiae FostersO]
gi|323334658|gb|EGA76032.1| Pbp2p [Saccharomyces cerevisiae AWRI796]
gi|323338741|gb|EGA79957.1| Pbp2p [Saccharomyces cerevisiae Vin13]
gi|323349811|gb|EGA84026.1| Pbp2p [Saccharomyces cerevisiae Lalvin QA23]
gi|323356159|gb|EGA87964.1| Pbp2p [Saccharomyces cerevisiae VL3]
gi|392301080|gb|EIW12169.1| Pbp2p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 413
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 87/387 (22%), Positives = 143/387 (36%), Gaps = 80/387 (20%)
Query: 302 HESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTED 361
H D P P + R+LC + ++G GA I +K ET I + + G +
Sbjct: 52 HSDNDHDSPDNVPSDVHLRMLCLVKHASLIVGHKGATISRIKSETSARINISNNIRGVPE 111
Query: 362 RLIVISGPAHPDDRISAPQDAVLRVQTRIARAI------PDNREQT-VMTRLLVASNQIG 414
R++ + G D V + I RA+ DN E + LL+ + +G
Sbjct: 112 RIVYVRGTC----------DDVAKAYGMIVRALLEEHGNEDNGEDIEISINLLIPHHLMG 161
Query: 415 CLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRL 474
C++GK GS + E+ LS A + +Q+ N+ ++ ING +A+ A F I+ L
Sbjct: 162 CIIGKRGSRLREIEDLSAAKL-FASPNQL---LLSNDRILTINGVPDAIHIATFYISQTL 217
Query: 475 RHHFFRDAFPSINRPL-------NPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFD 527
+ ++ R + N +D P F R
Sbjct: 218 LNFQMESPQKNVKRSIYYQPTQFNSVLIDHSQPNTIFHQRNH------------------ 259
Query: 528 AVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQ-GLMEVGGPMGF-PDFVG 585
+HP D + + +P + PQ V F P+FV
Sbjct: 260 ---------QYHPSD---KLLSYKPNKNLPISSTLLSMATPQYTTASVANATAFQPNFVI 307
Query: 586 PPHRRV--PVVVP----RSLVPIIQ--------------GEDGACLKQIRQISDAKITIT 625
P + PV+ P L+ +Q G+DG + +++ + I I
Sbjct: 308 PNVTVLDGPVISPAPGNHLLMNFVQQEIFIDEKFVGNVIGKDGKHINSVKESTGCSIIIQ 367
Query: 626 DPKPGATETVIIISGTPEQTHAAQSLI 652
DP G++E + I GT + AA LI
Sbjct: 368 DPVEGSSERRLTIRGTFMASQAAIMLI 394
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 121/292 (41%), Gaps = 73/292 (25%)
Query: 156 VQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKL 215
V KA ++ ++E E +++N + + + LL+ +GC++GK G +++I+ L
Sbjct: 123 VAKAYGMIVRALLE-----EHGNEDNGEDIEISINLLIPHHLMGCIIGKRGSRLREIEDL 177
Query: 216 PTCAL---------ASDEVVQITGEVDTVRKALKLISHQLLD---NSPRDH--ESIPGNP 261
L ++D ++ I G D + A IS LL+ SP+ + SI P
Sbjct: 178 SAAKLFASPNQLLLSNDRILTINGVPDAIHIATFYISQTLLNFQMESPQKNVKRSIYYQP 237
Query: 262 TGPSHPLPDHSVSSQGAPYATGHRDVADIH-------------LPMPPSI-----PKFHE 303
T + L DHS P H+ H LP+ ++ P++
Sbjct: 238 TQFNSVLIDHS-----QPNTIFHQRNHQYHPSDKLLSYKPNKNLPISSTLLSMATPQYTT 292
Query: 304 SGV-----------------LDRPKPSPE-----ILTF---RLLCHDERVGGVIGKGGAI 338
+ V LD P SP ++ F + ++ VG VIGK G
Sbjct: 293 ASVANATAFQPNFVIPNVTVLDGPVISPAPGNHLLMNFVQQEIFIDEKFVGNVIGKDGKH 352
Query: 339 IRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRI 390
I S+K+ TGC I + + V G+ +R + I G A Q A++ + +I
Sbjct: 353 INSVKESTGCSIIIQDPVEGSSERRLTIRGT------FMASQAAIMLISNKI 398
>gi|212529012|ref|XP_002144663.1| KH domain RNA binding protein [Talaromyces marneffei ATCC 18224]
gi|210074061|gb|EEA28148.1| KH domain RNA binding protein [Talaromyces marneffei ATCC 18224]
Length = 461
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 91/382 (23%), Positives = 149/382 (39%), Gaps = 53/382 (13%)
Query: 310 PKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGP 369
P+ + R + + IGKGG + +++ +G V + G +R++ +SG
Sbjct: 97 PQDESSWIHIRAVISSQEAATCIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSG- 155
Query: 370 AHPDDRISAPQDAVLRVQTRIARAIPDN--------REQTVMTRLLVASNQIGCLLGKGG 421
PQDAV + I R + + + +T RLL+ IG ++GKGG
Sbjct: 156 ---------PQDAVAKAFGLIIRTLNNEPLEAPSTAQSKTYPLRLLIPHILIGSIIGKGG 206
Query: 422 SIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRD 481
I E+++ SGA R+ D ++E VVL G +AV A + + L
Sbjct: 207 VRIREIQEASGA--RLNASDACLPLSTERSLVVL--GVADAVHIATYYVAVTLVEQLTER 262
Query: 482 ---------AFPSINRPLNPTFLDQVSPF-PSFIGRRELSPPGMYSNFGPSFHKFDAVGG 531
A S QV P+ P G + P ++ P ++ G
Sbjct: 263 FGGPAASAYATRSGGPAGVVPGGMQVVPYVPQPAGGQYGHPDSARRHY-PQNNRP----G 317
Query: 532 PPPPGSFHPHDDHSAFMHHIHRP-------------GMPPHMPDMKPWG-PQGLMEVGGP 577
P P G+ +PH +A P G PH P P+G P
Sbjct: 318 PGPYGAPYPHGGPAAQAPVTQPPLHYGGGAARAPYAGAGPHQP--APYGAPHAQPHGAST 375
Query: 578 MGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVII 637
V + +P +V I G+ G + +IR +S + I I +P+ + E ++
Sbjct: 376 QPLAGVVSSQPITQQIYIPNDMVGAIIGKGGTKINEIRHLSGSVIKINEPQENSNERLVT 435
Query: 638 ISGTPEQTHAAQSLIQAFVMSE 659
I+GT E A ++ A + SE
Sbjct: 436 ITGTQECNQMALYMLYARLESE 457
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 8/94 (8%)
Query: 278 APYATGHRDVADIHLPMPPSIPKFHESGVLDRPKP---SPEILTFRLLCHDERVGGVIGK 334
APYA A H P P P G +P S + +T ++ ++ VG +IGK
Sbjct: 350 APYAG-----AGPHQPAPYGAPHAQPHGASTQPLAGVVSSQPITQQIYIPNDMVGAIIGK 404
Query: 335 GGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
GG I ++ +G IK+ E + +RL+ I+G
Sbjct: 405 GGTKINEIRHLSGSVIKINEPQENSNERLVTITG 438
>gi|355560757|gb|EHH17443.1| hypothetical protein EGK_13854 [Macaca mulatta]
gi|355747773|gb|EHH52270.1| hypothetical protein EGM_12689 [Macaca fascicularis]
Length = 583
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 117/483 (24%), Positives = 188/483 (38%), Gaps = 132/483 (27%)
Query: 39 SKSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEAS 98
SK P + R+L P + +IGK+G + I++ T I V
Sbjct: 189 SKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVH---------------- 232
Query: 99 DNKKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQK 158
R EN G E S+ L++ + TS K
Sbjct: 233 ---------------RKENAGAAEKSITI-------------------LSTPEGTSAACK 258
Query: 159 ALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDK---- 214
++L + + E D + T+ + L++L + VG L+GK G +K+I++
Sbjct: 259 SILEIMHK--------EAQDIKFTE--EIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDT 308
Query: 215 ------LPTCALASDE-VVQITGEVDTVRKALKLISHQLLDNSPRDHES-------IPG- 259
L L + E + + G V+T KA + I ++ ++ D S IPG
Sbjct: 309 KITISPLQELTLYNPERTITVKGNVETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGL 368
Query: 260 --NPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEIL 317
N G P + G P A M P P+F +S E
Sbjct: 369 NLNALGLFPPTSGMPPPTSGPPSA------------MTPPYPQFEQS----------ETE 406
Query: 318 TFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRI 376
T L VG +IGK G I+ L + G IK+ A + + R+++I+GP
Sbjct: 407 TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPP------ 460
Query: 377 SAPQDAVLRVQTRIARAIPD------NREQTVMTRLLVASNQIGCLLGKGGSI--IAEMR 428
+A + Q RI I + E + + V S G ++GKGG + E++
Sbjct: 461 ----EAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTAKVNELQ 516
Query: 429 KLSGAYIRILGKDQIPKCASENEEVVL-INGEFEAVQEALFQ-----ITTRLRHHFFRDA 482
LS A + ++ +DQ P EN++VV+ I G F A Q + Q I T+++ H + A
Sbjct: 517 NLSSAEV-VVPRDQTP---DENDQVVVKITGHFYACQAKVAQRKIQEILTQVKQHQQQKA 572
Query: 483 FPS 485
S
Sbjct: 573 LQS 575
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 137/353 (38%), Gaps = 67/353 (18%)
Query: 311 KPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV--MEAVSGTEDRLIVISG 368
K P L RLL + VG +IGK GA IR++ ++T I V E E + ++S
Sbjct: 190 KQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILST 249
Query: 369 PAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMR 428
P + SA ++L + + A+ I E + ++L +N +G L+GK G + ++
Sbjct: 250 P----EGTSAACKSILEIMHKEAQDIKFTEE--IPLKILAHNNFVGRLIGKEGRNLKKIE 303
Query: 429 KLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINR 488
+ + I I ++ E + + G E +A +I ++R + D S+N
Sbjct: 304 QDTDTKITISPLQEL--TLYNPERTITVKGNVETCAKAEEEIMKKIRESYEND-IASMN- 359
Query: 489 PLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFM 548
L + PG+ N + F G PPP S P SA
Sbjct: 360 -LQAHLI-----------------PGLNLN---ALGLFPPTSGMPPPTSGPP----SAM- 393
Query: 549 HHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDG 608
PP +P F V + +P V I G+ G
Sbjct: 394 -------TPP---------------------YPQFEQSETETVHLFIPALSVGAIIGKQG 425
Query: 609 ACLKQIRQISDAKITITDPK-PGATETVIIISGTPEQTHAAQSLIQAFVMSET 660
+KQ+ + + A I I + P A ++II+G PE AQ I + E
Sbjct: 426 QHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFKAQGRIYGKIKEEN 478
>gi|426227473|ref|XP_004007842.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
isoform 2 [Ovis aries]
Length = 441
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 141/329 (42%), Gaps = 67/329 (20%)
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQIDK----------LPTCALASDE-VVQITGEVDTVRK 237
L++L + VG L+GK G +K+I++ L L + E + + G V+T K
Sbjct: 140 LKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQELTLYNPERTITVKGNVETCAK 199
Query: 238 ALKLISHQLLDNSPRDHES-------IPG---NPTGPSHPLPDHSVSSQGAPYATGHRDV 287
A + I ++ ++ D S IPG N G P + G P A
Sbjct: 200 AEEEIMKKIRESYENDIASMNLQAHLIPGLNLNALGLFPPTSGMPPPTSGPPSA------ 253
Query: 288 ADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETG 347
M P P+F + E T L VG +IGK G I+ L + G
Sbjct: 254 ------MTPPYPQFEQQS---------ETETVHLFIPALSVGAIIGKQGQHIKQLSRFAG 298
Query: 348 CDIKVMEAVS-GTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPD------NREQ 400
IK+ A + + R+++I+GP +A + Q RI I + E
Sbjct: 299 ASIKIAPAEAPDAKVRMVIITGPP----------EAQFKAQGRIYGKIKEENFVSPKEEV 348
Query: 401 TVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVL-INGE 459
+ + V S G ++GKGG + E++ LS A + ++ +DQ P EN++VV+ I G
Sbjct: 349 KLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEV-VVPRDQTP---DENDQVVVKITGH 404
Query: 460 FEAVQEA---LFQITTRLRHHFFRDAFPS 485
F A Q A + +I T+++ H + A S
Sbjct: 405 FYACQVAQRKIQEILTQVKQHQQQKALQS 433
>gi|290878251|emb|CBK39310.1| Pbp2p [Saccharomyces cerevisiae EC1118]
Length = 413
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 142/381 (37%), Gaps = 80/381 (20%)
Query: 308 DRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVIS 367
D P P + R+LC + ++G GA I +K ET I + + G +R++ +
Sbjct: 58 DSPDNVPSDVHLRMLCLVKHASLIVGHKGATISRIKSETSARINISNNIRGVPERIVYVR 117
Query: 368 GPAHPDDRISAPQDAVLRVQTRIARAI------PDNREQT-VMTRLLVASNQIGCLLGKG 420
G D V + I RA+ DN E + LL+ + +GC++GK
Sbjct: 118 GTC----------DDVAKAYGMIVRALLEEHGNEDNGEDIEISINLLIPHHLMGCIIGKR 167
Query: 421 GSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFR 480
GS + E+ LS A + +Q+ N+ ++ ING +A+ A F I+ L +
Sbjct: 168 GSRLREIEDLSAAKL-FASPNQL---LLSNDRILTINGVPDAIHIATFYISQTLLNFQME 223
Query: 481 DAFPSINRPL-------NPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPP 533
++ R + N +D P F R
Sbjct: 224 SPQKNVKRSIYYQPTQFNSVLIDHSQPNTIFHQRNH------------------------ 259
Query: 534 PPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQ-GLMEVGGPMGF-PDFVGPPHRRV 591
+HP D + + +P + PQ V F P+FV P +
Sbjct: 260 ---QYHPSD---KLLSYKPNKNLPISSTLLSMATPQYTTASVANATAFQPNFVIPNVTVL 313
Query: 592 --PVVVP----RSLVPIIQ--------------GEDGACLKQIRQISDAKITITDPKPGA 631
PV+ P L+ +Q G+DG + +++ + I I DP G+
Sbjct: 314 DGPVISPAPGNHLLMNFVQQEIFIDEKFVGNVIGKDGKHINSVKESTGCSIIIQDPVEGS 373
Query: 632 TETVIIISGTPEQTHAAQSLI 652
+E + I GT + AA LI
Sbjct: 374 SERRLTIRGTFMASQAAIMLI 394
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 121/292 (41%), Gaps = 73/292 (25%)
Query: 156 VQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKL 215
V KA ++ ++E E +++N + + + LL+ +GC++GK G +++I+ L
Sbjct: 123 VAKAYGMIVRALLE-----EHGNEDNGEDIEISINLLIPHHLMGCIIGKRGSRLREIEDL 177
Query: 216 PTCAL---------ASDEVVQITGEVDTVRKALKLISHQLLD---NSPRDH--ESIPGNP 261
L ++D ++ I G D + A IS LL+ SP+ + SI P
Sbjct: 178 SAAKLFASPNQLLLSNDRILTINGVPDAIHIATFYISQTLLNFQMESPQKNVKRSIYYQP 237
Query: 262 TGPSHPLPDHSVSSQGAPYATGHRDVADIH-------------LPMPPSI-----PKFHE 303
T + L DHS P H+ H LP+ ++ P++
Sbjct: 238 TQFNSVLIDHS-----QPNTIFHQRNHQYHPSDKLLSYKPNKNLPISSTLLSMATPQYTT 292
Query: 304 SGV-----------------LDRPKPSPE-----ILTF---RLLCHDERVGGVIGKGGAI 338
+ V LD P SP ++ F + ++ VG VIGK G
Sbjct: 293 ASVANATAFQPNFVIPNVTVLDGPVISPAPGNHLLMNFVQQEIFIDEKFVGNVIGKDGKH 352
Query: 339 IRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRI 390
I S+K+ TGC I + + V G+ +R + I G A Q A++ + +I
Sbjct: 353 INSVKESTGCSIIIQDPVEGSSERRLTIRGT------FMASQAAIMLISNKI 398
>gi|196016215|ref|XP_002117961.1| hypothetical protein TRIADDRAFT_61998 [Trichoplax adhaerens]
gi|190579434|gb|EDV19529.1| hypothetical protein TRIADDRAFT_61998 [Trichoplax adhaerens]
Length = 364
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 145/366 (39%), Gaps = 64/366 (17%)
Query: 301 FHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTE 360
++ S DR + L + G +IGKGGA I+S ++++ I + +
Sbjct: 30 YNVSHAFDRNSTGNTCFIDKGLVEQKEAGRIIGKGGAKIKSFREQSTARINISDG--SLP 87
Query: 361 DRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDN---------REQTVMTRLLVASN 411
+R++ ++GP DAV + I + + ++ E T+ LL+
Sbjct: 88 ERIVTVNGPI----------DAVCKAFKLICQKLDEDFRIINNSSKSEPTIKFDLLIPVP 137
Query: 412 QIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQIT 471
++GKGG + E+R+ +GA + I + +P + ++ V+ I G A+ + + +++
Sbjct: 138 HCRSIIGKGGGTVKEIRESTGAQVSI-ASNVLP---NSSDRVMTITGSSSAISKCIQRLS 193
Query: 472 TRLRHHFFRDAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGG 531
L P +P N PP + N G AV G
Sbjct: 194 QLLSELPLGQHVPYQPKPPN-------------------VPPTAFQN-GQVHELTFAVPG 233
Query: 532 --PPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGL--MEVGGPMGFPDFVGPP 587
P PP + P+ + I P+ D+ Q M GG
Sbjct: 234 PFPIPPHAQLPYGPPVPVITQI-----APYSVDIPSIVTQNFSAMSNGGTFA-------- 280
Query: 588 HRRVPVV-VPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTH 646
R ++ +P L+ I G G + +IRQIS A I I P T + ISGTPE
Sbjct: 281 -RSTQLLKIPHDLIGCIIGRGGVKINEIRQISGANIKIASPNGDTTGRQVTISGTPESIS 339
Query: 647 AAQSLI 652
AAQ LI
Sbjct: 340 AAQYLI 345
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 102/255 (40%), Gaps = 63/255 (24%)
Query: 156 VQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI--- 212
V KA L+ +++ E + + + + LL+ ++GKGG +K+I
Sbjct: 100 VCKAFKLICQKLDE---DFRIINNSSKSEPTIKFDLLIPVPHCRSIIGKGGGTVKEIRES 156
Query: 213 ---------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTG 263
+ LP +SD V+ ITG + K ++ +S QLL P + +P P
Sbjct: 157 TGAQVSIASNVLPN---SSDRVMTITGSSSAISKCIQRLS-QLLSELPLG-QHVPYQPKP 211
Query: 264 PS---------------------HPLPDHS---------VSSQGAPYATGHRDVADIHLP 293
P+ P+P H+ V +Q APY+ DI
Sbjct: 212 PNVPPTAFQNGQVHELTFAVPGPFPIPPHAQLPYGPPVPVITQIAPYSV------DIPSI 265
Query: 294 MPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVM 353
+ + G R S ++L + HD +G +IG+GG I ++Q +G +IK+
Sbjct: 266 VTQNFSAMSNGGTFAR---STQLLK---IPHD-LIGCIIGRGGVKINEIRQISGANIKIA 318
Query: 354 EAVSGTEDRLIVISG 368
T R + ISG
Sbjct: 319 SPNGDTTGRQVTISG 333
>gi|426199945|gb|EKV49869.1| hypothetical protein AGABI2DRAFT_63586 [Agaricus bisporus var.
bisporus H97]
Length = 365
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 148/371 (39%), Gaps = 95/371 (25%)
Query: 301 FHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTE 360
+ E+ P + R L + +IGKGG+ + +++++G + V E++ G
Sbjct: 48 YGEASTTASAVPPSANIHMRCLIVTQDASIIIGKGGSHVNEIREKSGARVMVSESIPGNP 107
Query: 361 DRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDN--------REQTVMTRLLVASNQ 412
+R++ +SGP DAV + I R I D + V + ++ +++
Sbjct: 108 ERILNVSGPL----------DAVSKAFGLIVRRINDEPFDVPSVPGSRAVTIKFMIPNSR 157
Query: 413 IGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITT 472
+G ++GKGGS I E++ SGA + + +P E V+ + G +A+ A + I T
Sbjct: 158 MGSVIGKGGSKIKEIQDASGAKLN-ASEGMLP---GSTERVLSVAGVADAIHIATYYIGT 213
Query: 473 RLRHHFFRDAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGP 532
L ++ PS + N T+ PS RR G
Sbjct: 214 ILIE--AQERMPSTS---NSTYR------PSSQPRRPTQGGGS----------------- 245
Query: 533 PPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVP 592
S+ P H H P PPH P PQ L +
Sbjct: 246 ----SYVPGYSH-------HAPYGPPHNP------PQQL-----------------QTQQ 271
Query: 593 VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDP---------KPGAT--ETVIIISGT 641
+ +P LV I G+ G+ + +IR +S ++I I +P PG + E +++I+G
Sbjct: 272 IYIPNDLVGCIIGKGGSKINEIRHMSASQIKIMEPGATGLGPNGAPGGSEGERLVVITGQ 331
Query: 642 PEQTHAAQSLI 652
P A L+
Sbjct: 332 PANIQMAVQLL 342
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 95/208 (45%), Gaps = 44/208 (21%)
Query: 312 PSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA-VSGTEDRLIVISGPA 370
P +T + + + R+G VIGKGG+ I+ ++ +G + E + G+ +R++ ++G A
Sbjct: 142 PGSRAVTIKFMIPNSRMGSVIGKGGSKIKEIQDASGAKLNASEGMLPGSTERVLSVAGVA 201
Query: 371 ---------------HPDDRISAPQDAVLRVQTRIARAI-------------------PD 396
+R+ + ++ R ++ R P
Sbjct: 202 DAIHIATYYIGTILIEAQERMPSTSNSTYRPSSQPRRPTQGGGSSYVPGYSHHAPYGPPH 261
Query: 397 NREQTVMTR-LLVASNQIGCLLGKGGSIIAEMRKLSGAYIRI-------LGKDQIPKCAS 448
N Q + T+ + + ++ +GC++GKGGS I E+R +S + I+I LG + P S
Sbjct: 262 NPPQQLQTQQIYIPNDLVGCIIGKGGSKINEIRHMSASQIKIMEPGATGLGPNGAP-GGS 320
Query: 449 ENEEVVLINGEFEAVQEALFQITTRLRH 476
E E +V+I G+ +Q A+ + RL
Sbjct: 321 EGERLVVITGQPANIQMAVQLLYHRLEQ 348
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 101/245 (41%), Gaps = 48/245 (19%)
Query: 147 LNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSKFV-LRLLVLSTQVGCLLGKG 205
LN V KA L+ R+ + E D + S+ V ++ ++ ++++G ++GKG
Sbjct: 111 LNVSGPLDAVSKAFGLIVRRIND-----EPFDVPSVPGSRAVTIKFMIPNSRMGSVIGKG 165
Query: 206 GCVIKQIDKLPTCALASDE---------VVQITGEVDTVRKALKLISHQLLDNSPRDHES 256
G IK+I L + E V+ + G D + A I L++ E
Sbjct: 166 GSKIKEIQDASGAKLNASEGMLPGSTERVLSVAGVADAIHIATYYIGTILIE----AQER 221
Query: 257 IPGNPTGPSHP--LPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSP 314
+P P P G+ Y G+ H P P H P
Sbjct: 222 MPSTSNSTYRPSSQPRRPTQGGGSSYVPGYSH----HAPYGPP----HN--------PPQ 265
Query: 315 EILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVME----------AVSGTE-DRL 363
++ T ++ ++ VG +IGKGG+ I ++ + IK+ME A G+E +RL
Sbjct: 266 QLQTQQIYIPNDLVGCIIGKGGSKINEIRHMSASQIKIMEPGATGLGPNGAPGGSEGERL 325
Query: 364 IVISG 368
+VI+G
Sbjct: 326 VVITG 330
>gi|409082121|gb|EKM82479.1| hypothetical protein AGABI1DRAFT_33710 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 365
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 144/355 (40%), Gaps = 95/355 (26%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
+ R L + +IGKGG+ + +++++G + V E++ G +R++ +SGP
Sbjct: 64 IHMRCLIVTQDASIIIGKGGSHVNEIREKSGARVMVSESIPGNPERILNVSGPL------ 117
Query: 377 SAPQDAVLRVQTRIARAIPDN--------REQTVMTRLLVASNQIGCLLGKGGSIIAEMR 428
DAV + I R I D + V + ++ ++++G ++GKGGS I E++
Sbjct: 118 ----DAVSKAFGLIVRRINDEPFDVPSVPGSRAVTIKFMIPNSRMGSVIGKGGSKIKEIQ 173
Query: 429 KLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINR 488
SGA + + +P E V+ + G +A+ A + I T L ++ PS +
Sbjct: 174 DASGAKLN-ASEGMLP---GSTERVLSVAGVADAIHIATYYIGTILIE--AQERMPSTS- 226
Query: 489 PLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFM 548
N T+ PS RR G S+ P H
Sbjct: 227 --NSTYR------PSSQPRRPTQGGGS---------------------SYVPGYSH---- 253
Query: 549 HHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDG 608
H P PPH P PQ L + + +P LV I G+ G
Sbjct: 254 ---HAPYGPPHNP------PQQL-----------------QTQQIYIPNDLVGCIIGKGG 287
Query: 609 ACLKQIRQISDAKITITDP---------KPGAT--ETVIIISGTPEQTHAAQSLI 652
+ + +IR +S ++I I +P PG + E +++I+G P A L+
Sbjct: 288 SKINEIRHMSASQIKIMEPGATGLGPNGAPGGSEGERLVVITGQPANIQMAVQLL 342
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 95/208 (45%), Gaps = 44/208 (21%)
Query: 312 PSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA-VSGTEDRLIVISGPA 370
P +T + + + R+G VIGKGG+ I+ ++ +G + E + G+ +R++ ++G A
Sbjct: 142 PGSRAVTIKFMIPNSRMGSVIGKGGSKIKEIQDASGAKLNASEGMLPGSTERVLSVAGVA 201
Query: 371 ---------------HPDDRISAPQDAVLRVQTRIARAI-------------------PD 396
+R+ + ++ R ++ R P
Sbjct: 202 DAIHIATYYIGTILIEAQERMPSTSNSTYRPSSQPRRPTQGGGSSYVPGYSHHAPYGPPH 261
Query: 397 NREQTVMTR-LLVASNQIGCLLGKGGSIIAEMRKLSGAYIRI-------LGKDQIPKCAS 448
N Q + T+ + + ++ +GC++GKGGS I E+R +S + I+I LG + P S
Sbjct: 262 NPPQQLQTQQIYIPNDLVGCIIGKGGSKINEIRHMSASQIKIMEPGATGLGPNGAP-GGS 320
Query: 449 ENEEVVLINGEFEAVQEALFQITTRLRH 476
E E +V+I G+ +Q A+ + RL
Sbjct: 321 EGERLVVITGQPANIQMAVQLLYHRLEQ 348
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 83/386 (21%), Positives = 141/386 (36%), Gaps = 102/386 (26%)
Query: 6 TPSKRPHDDDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIMFRVLCPVSKIDGVIGKDG 65
PS + DD + P+ +K+ G+ S P+ I R L +IGK G
Sbjct: 24 NPSDKQKDDSIKSNPDSGDKAGSSYGEASTTAPAVPPSANIHMRCLIVTQDASIIIGKGG 83
Query: 66 EMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASV 125
+++I + +G + V SE++ + ER
Sbjct: 84 SHVNEIREKSGARVMV-----------------------SESIPGNPERI---------- 110
Query: 126 ADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSS 185
LN V KA L+ R+ + E D + S
Sbjct: 111 ---------------------LNVSGPLDAVSKAFGLIVRRIND-----EPFDVPSVPGS 144
Query: 186 KFV-LRLLVLSTQVGCLLGKGGCVIKQIDKLPTCALASDE---------VVQITGEVDTV 235
+ V ++ ++ ++++G ++GKGG IK+I L + E V+ + G D +
Sbjct: 145 RAVTIKFMIPNSRMGSVIGKGGSKIKEIQDASGAKLNASEGMLPGSTERVLSVAGVADAI 204
Query: 236 RKALKLISHQLLDNSPRDHESIPGNPTGPSHP--LPDHSVSSQGAPYATGHRDVADIHLP 293
A I L++ E +P P P G+ Y G+ H P
Sbjct: 205 HIATYYIGTILIE----AQERMPSTSNSTYRPSSQPRRPTQGGGSSYVPGYSH----HAP 256
Query: 294 MPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVM 353
P H P ++ T ++ ++ VG +IGKGG+ I ++ + IK+M
Sbjct: 257 YGPP----HN--------PPQQLQTQQIYIPNDLVGCIIGKGGSKINEIRHMSASQIKIM 304
Query: 354 E----------AVSGTE-DRLIVISG 368
E A G+E +RL+VI+G
Sbjct: 305 EPGATGLGPNGAPGGSEGERLVVITG 330
>gi|413935392|gb|AFW69943.1| hypothetical protein ZEAMMB73_108333 [Zea mays]
Length = 397
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 90/190 (47%), Gaps = 18/190 (9%)
Query: 318 TFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA--VSGTEDRLIVISGPAHPDDR 375
FRL+ ++VGG+IG+ G I+ L ET ++V++A G R++++S +
Sbjct: 99 VFRLVVPADKVGGIIGRRGDTIKRLCDETRARVRVLDAPHGDGAFSRIVLVSAREEVEAE 158
Query: 376 ISAPQDAVLRVQTRIARAIPDNREQTVM--------TRLLVASNQIGCLLGKGGSIIAEM 427
+S +A +++ I N + T+M RLLV Q ++GK G I +
Sbjct: 159 LSPAMNAAIKIFKHINEIEDINSDGTLMAPAPEISSVRLLVPFAQALHVIGKQGVTIKSI 218
Query: 428 RKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRH--------HFF 479
++ +G+ +RI+ +D++ + E +V ING V AL + LR H F
Sbjct: 219 QESTGSTVRIMDEDELLSHETMGERIVEINGASLEVLNALKLVLGLLRKFLVDHGVLHLF 278
Query: 480 RDAFPSINRP 489
P + +P
Sbjct: 279 ERKNPEVAQP 288
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 75/353 (21%), Positives = 141/353 (39%), Gaps = 88/353 (24%)
Query: 42 FPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEET--VSGSDERLVVIEASD 99
+PG +FR++ P K+ G+IG+ G+ + ++ +T +RV + G+ R+V++ A +
Sbjct: 94 WPGASVFRLVVPADKVGGIIGRRGDTIKRLCDETRARVRVLDAPHGDGAFSRIVLVSARE 153
Query: 100 N-KKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQK 158
+ E S + A+I+ ++ N+ ED ++G+++
Sbjct: 154 EVEAELSPAMNAAIKIFKH------------INEIEDINSDGTLMA-------------- 187
Query: 159 ALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI------ 212
P E++ +RLLV Q ++GK G IK I
Sbjct: 188 -------------PAPEISS----------VRLLVPFAQALHVIGKQGVTIKSIQESTGS 224
Query: 213 -------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIP-GNPTGP 264
D+L + + +V+I G V ALKL+ LL DH + P
Sbjct: 225 TVRIMDEDELLSHETMGERIVEINGASLEVLNALKLVLG-LLRKFLVDHGVLHLFERKNP 283
Query: 265 SHPLPDHSVSS-QGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEIL-----T 318
P S + +G+ + GH P FH D +P+ ++ T
Sbjct: 284 EVAQPQQSRGNPKGSRFLYGHD-------------PSFHAPYSRDLSQPADSLITKITRT 330
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAH 371
++ D VG +IG G + ++ +G + + + +G E R+++ P+
Sbjct: 331 MQIPLAD--VGEIIGVRGENVELIRSVSGAVVVLEKIGNGQEVRVMIEGTPSQ 381
>gi|367019960|ref|XP_003659265.1| hypothetical protein MYCTH_2296066 [Myceliophthora thermophila ATCC
42464]
gi|347006532|gb|AEO54020.1| hypothetical protein MYCTH_2296066 [Myceliophthora thermophila ATCC
42464]
Length = 482
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 95/388 (24%), Positives = 152/388 (39%), Gaps = 77/388 (19%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
+ R + +IGKGG + ++Q +G V + G +R++ +SG
Sbjct: 123 IHVRAVISSPEAATIIGKGGENVSKIRQMSGAKCTVSDYQKGAVERILTVSGIV------ 176
Query: 377 SAPQDAVLRVQTRIARAIPD--------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMR 428
DAV + I R + + +T RLL+ IG ++GKGG+ I E++
Sbjct: 177 ----DAVAKAFGLIIRTLNNEPLNEPSSQHSKTYPLRLLIPHILIGSIIGKGGARIKEIQ 232
Query: 429 KLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHF---FRDAFPS 485
+ SGA R+ D ++E VV+ G +AV A + + + L F A S
Sbjct: 233 EASGA--RLNASDSCLPLSTERSLVVM--GVADAVHIATYYVGSTLLEQLNERFGGAAAS 288
Query: 486 INRPLNPTFLD------QVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGP-----PP 534
+ QV P+ +P N+G + + A P PP
Sbjct: 289 AYATRSGGPAGAVPGGMQVIPY---------NPQPAGGNYGNRDNYYRARADPRAHHMPP 339
Query: 535 ----------------PGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPM 578
P P+ H A + G PH+ P G G GP
Sbjct: 340 QAYPPPYGHPHPAHPGPAVPMPYGAHPAAAY-----GAGPHV-QPHPVGHAGPHVATGPH 393
Query: 579 GFPDFVGPPHRRVP-------VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGA 631
G P G H VP + +P +V I G+ G + +IRQIS + I I +P+ +
Sbjct: 394 GQP-MPGAAH--VPGAPLTQQIYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQDNS 450
Query: 632 TETVIIISGTPEQTHAAQSLIQAFVMSE 659
E ++ I+GT E A ++ + + SE
Sbjct: 451 NERLVTITGTEECNRMALYMLYSRLESE 478
>gi|318054596|ref|NP_001188110.1| poly(rC)-binding protein 2 [Ictalurus punctatus]
gi|308322769|gb|ADO28522.1| poly(rc)-binding protein 2 [Ictalurus punctatus]
Length = 318
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 87/157 (55%), Gaps = 11/157 (7%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTTAIFK- 70
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I+ ++ ++ + V R++V ++Q G L+GKGG I E+R+ +GA
Sbjct: 71 -AFSMIIDKLEEDISSSMSNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
+++ G D +P + E + I G ++ E + QI
Sbjct: 130 QVQVAG-DMLP---NSTERAITIAGTPLSIIECVKQI 162
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 111/242 (45%), Gaps = 40/242 (16%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI 212
T+ + KA ++ +++ E + + +++ T LR++V ++Q G L+GKGGC IK+I
Sbjct: 65 TTAIFKAFSMIIDKLEE-DISSSMSNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEI 123
Query: 213 ------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGN 260
D LP +++ + I G ++ + +K I +L++ P+ +IP
Sbjct: 124 RESTGAQVQVAGDMLPN---STERAITIAGTPLSIIECVKQICVVMLESPPKGV-TIPYR 179
Query: 261 PTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKP-------- 312
P P+ + + G YA V H P + K H+ + P P
Sbjct: 180 PKPSGSPV----IFAGGQAYA-----VQGQHAIPQPDLTKLHQLAMQQSPFPLAPSSQGF 230
Query: 313 ------SPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVI 366
+ + + L ++ +G +IG+ GA I ++Q +G IK+ V G+ DR + I
Sbjct: 231 TAGMDATTQTGSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSNDRQVTI 290
Query: 367 SG 368
+G
Sbjct: 291 TG 292
Score = 46.2 bits (108), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 39/67 (58%)
Query: 593 VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLI 652
+ +P L+ I G GA + +IRQ+S A+I I +P G+ + + I+G+P A+ LI
Sbjct: 245 LTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSNDRQVTITGSPASISLAEYLI 304
Query: 653 QAFVMSE 659
A + SE
Sbjct: 305 NARLSSE 311
Score = 39.7 bits (91), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 396 DNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVL 455
D QT L + ++ IGC++G+ G+ I E+R++SGA I+I + N+ V
Sbjct: 235 DATTQTGSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE-----GSNDRQVT 289
Query: 456 INGEFEAVQEALFQITTRL 474
I G ++ A + I RL
Sbjct: 290 ITGSPASISLAEYLINARL 308
>gi|258566349|ref|XP_002583919.1| hypothetical protein UREG_06886 [Uncinocarpus reesii 1704]
gi|237907620|gb|EEP82021.1| hypothetical protein UREG_06886 [Uncinocarpus reesii 1704]
Length = 366
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 83/378 (21%), Positives = 146/378 (38%), Gaps = 82/378 (21%)
Query: 301 FHESGVLDRPKPSPE----ILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAV 356
+E G PK E +LT R + + G +IGK G + L+ ETG V + V
Sbjct: 28 LNEQGEEITPKTEEEYAQSMLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVV 87
Query: 357 SGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVM-----------TR 405
G DR++ ++GP + +A+++ + Q M R
Sbjct: 88 QGVHDRVLTVTGPLQ----------GTAKAYGMVAKSLLEGAPQVGMGGIIQNNGTHPVR 137
Query: 406 LLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQE 465
LL++ NQ+G ++G+ G I ++ SG + + K+ +P+ E +V + G E +++
Sbjct: 138 LLISHNQMGTIIGRQGLKIKYIQDASGVRM-VAQKEMLPQST---ERIVEVQGTPEGIEK 193
Query: 466 ALFQITTRLRHHFFRDAFPSINRP----------LNPTFLDQVSPFPSFIGRRELSPPGM 515
A+++I L + R + P +N +FL P P++ GR
Sbjct: 194 AVWEIGKCLIDDWQRGTGTVLYNPAVRANVGGGQMNSSFL---GPNPNYGGRS------- 243
Query: 516 YSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVG 575
Y+ G D P G H+ + G+P D
Sbjct: 244 YNRTGNGADFSD----QPSSGYNRRHNSDAP------NRGIPLVTED------------- 280
Query: 576 GPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGAT-ET 634
G + + +P +V I G G+ + +IR+ S A+I+I T E
Sbjct: 281 ---------GEEVQTQNISIPSDMVGCIIGRGGSKISEIRRSSGARISIAKASHDETGER 331
Query: 635 VIIISGTPEQTHAAQSLI 652
+ I G+ + A L+
Sbjct: 332 MFTIMGSAQANEKALYLL 349
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 146/358 (40%), Gaps = 70/358 (19%)
Query: 165 ERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI-DKLPTCALAS- 222
E+ E+ P+TE E S LR +V S + G ++GK G + + D+ A S
Sbjct: 30 EQGEEITPKTE----EEYAQSMLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSK 85
Query: 223 ------DEVVQITGEVDTVRKALKLISHQLLDNSPRDHES--IPGNPTGPSHPLPDHS-- 272
D V+ +TG + KA +++ LL+ +P+ I N T P L H+
Sbjct: 86 VVQGVHDRVLTVTGPLQGTAKAYGMVAKSLLEGAPQVGMGGIIQNNGTHPVRLLISHNQM 145
Query: 273 ---VSSQGAPY-----ATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCH 324
+ QG A+G R VA + +P S + E + +PE +
Sbjct: 146 GTIIGRQGLKIKYIQDASGVRMVAQKEM-LPQSTERIVE------VQGTPEGI------- 191
Query: 325 DERVGGVIGKGGAIIRSLKQETGCDI---KVMEAVSGTEDRLIVISGP------------ 369
E+ IGK +I ++ TG + V V G + + GP
Sbjct: 192 -EKAVWEIGK--CLIDDWQRGTGTVLYNPAVRANVGGGQMNSSFL-GPNPNYGGRSYNRT 247
Query: 370 AHPDDRISAPQDAVLRVQTRIA--RAIP---DNREQTVMTRLLVASNQIGCLLGKGGSII 424
+ D P R A R IP ++ E+ + + S+ +GC++G+GGS I
Sbjct: 248 GNGADFSDQPSSGYNRRHNSDAPNRGIPLVTEDGEEVQTQNISIPSDMVGCIIGRGGSKI 307
Query: 425 AEMRKLSGAYIRILGKDQIPKCASE--NEEVVLINGEFEAVQEALFQITTRLRHHFFR 480
+E+R+ SGA I I K + + E + I G +A ++AL+ + L R
Sbjct: 308 SEIRRSSGARI------SIAKASHDETGERMFTIMGSAQANEKALYLLYENLEAEKMR 359
>gi|449514357|ref|XP_002192510.2| PREDICTED: heterogeneous nuclear ribonucleoprotein K [Taeniopygia
guttata]
Length = 434
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 100/421 (23%), Positives = 153/421 (36%), Gaps = 84/421 (19%)
Query: 301 FHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTE 360
E R + + E++ R+L + G VIGKGG I++L+ + + V ++
Sbjct: 24 MEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDS----- 78
Query: 361 DRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQT--------VMTRLLVASNQ 412
SGP +RI + + + + + IP E RLL+ +
Sbjct: 79 ------SGP----ERILSISADIETIGEILKKIIPTLEEYQHYKGSDFDCELRLLIHQSL 128
Query: 413 IGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITT 472
G ++G G+ I E+R+ + I++ + C + VVLI G+ + V E + I
Sbjct: 129 AGGIIGVKGAKIKELRENTQTTIKLFQE----CCPHSTDRVVLIGGKPDRVVECIKIILD 184
Query: 473 RLRHHFFRDAFPSIN--RPLNPTFLDQVSPFPSF---IGRRELSPPGMYSNFGPSFHKFD 527
+ SI L F D+ + F R P G F +
Sbjct: 185 LISEECLFVVLVSIKGRAQLMIHFYDETYDYGGFTMMFDDRRGRPVGFPMRGRGGFDRMP 244
Query: 528 -AVGGPPPPGSFHPHDDHSA----------------------------------FMHHIH 552
GG P P S +DD S M +
Sbjct: 245 PGRGGRPMPPSRRDYDDMSPRRGPPPPPPGRGVRGGSRARNLPLPPPPPPRGGDLMSYDR 304
Query: 553 R--PG-------MPPHMPDMKPWGPQGLMEVG--------GPMGFPDFVGPPHRRVPVVV 595
R PG M H+ P L E G G G +G P V +
Sbjct: 305 RGRPGDRYDGMMMQCHVDACDDMQPPELFEGGSGYDYSYAGGRGSYGDLGGPIITTQVTI 364
Query: 596 PRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAF 655
P+ L I G+ G +KQIR S A I I +P G+ + +I I+GT +Q AQ L+Q
Sbjct: 365 PKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNS 424
Query: 656 V 656
V
Sbjct: 425 V 425
Score = 40.0 bits (92), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 33 YSENQPSKSFPGG--IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDE 90
Y+ + S GG I +V P +IGK G+ + QI ++G +I+++E + GS++
Sbjct: 343 YAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSED 402
Query: 91 RLVVIEASDNKKETSENL 108
R++ I + ++ + ++ L
Sbjct: 403 RIITITGTQDQIQNAQYL 420
>gi|225681071|gb|EEH19355.1| Poly(rC)-binding protein [Paracoccidioides brasiliensis Pb03]
Length = 495
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 144/371 (38%), Gaps = 48/371 (12%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISA 378
R + IGKGG + +++ +G V + G +R++ +SG
Sbjct: 139 IRAVISSAEAATCIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGM--------- 189
Query: 379 PQDAVLRVQTRIARAIPDN--------REQTVMTRLLVASNQIGCLLGKGGSIIAEMRKL 430
QDAV + I R + + + +T RLL+ IG ++GK G I E+++
Sbjct: 190 -QDAVAKAFGLIIRTLNNEPLEAPSTAQSKTYPLRLLIPHLLIGSIIGKSGVRIREIQEA 248
Query: 431 SGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRD--------- 481
SGA R+ D ++E ++L G +AV A + + L
Sbjct: 249 SGA--RLNASDSCLPLSTERTLIIL--GVADAVHIATYYVAVTLVEQLTERFGGPAASAY 304
Query: 482 AFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPH 541
A S QV P+ + P + P + + GG P
Sbjct: 305 ATRSGGPAGVVPGGMQVVPYIPQPAGGQYGHPDTFKRHQPQGTRAVSTGGYGVPYVHGQP 364
Query: 542 DDHSAFMHHIH-----RPGMP---PHMPDMKPWG-PQGLMEVGGPMGFPDFVGPPHRRVP 592
+H RPG PH P P+G PQ G P P VG P
Sbjct: 365 GQPQMPQQALHYGASSRPGYTGAGPHQPS--PYGAPQPSQVHGAPSSQP--VGGVVPGAP 420
Query: 593 VV----VPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAA 648
V +P +V I G+ GA + +IR +S + I I +P+ + E ++ I+GTPE A
Sbjct: 421 VTQQIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQDNSNERLVTITGTPECNQMA 480
Query: 649 QSLIQAFVMSE 659
++ + + SE
Sbjct: 481 LYMLYSRLESE 491
Score = 40.0 bits (92), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 32/52 (61%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
+T ++ ++ VG +IGKGGA I ++ +G IK+ E + +RL+ I+G
Sbjct: 421 VTQQIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQDNSNERLVTITG 472
>gi|395839831|ref|XP_003792779.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 4 [Otolemur garnettii]
Length = 574
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 103/442 (23%), Positives = 179/442 (40%), Gaps = 104/442 (23%)
Query: 48 FRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSEN 107
R+L P + +IGK+G + I++ T +
Sbjct: 194 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRV---------------------------- 225
Query: 108 LEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERM 167
I R EN+G E V + EG+ +A ++ E M
Sbjct: 226 ---DIHRKENSGAAEKPVTIHA-------TPEGT---------------SEACRMILEIM 260
Query: 168 VEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQID-----KLPTCALAS 222
+ ET++A++ L++L + VG L+GK G +K+I+ K+ +L
Sbjct: 261 QKEADETKLAEE-------IPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQD 313
Query: 223 ------DEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQ 276
+ + + G V+ A I +L + D ++ ++ +P ++S+
Sbjct: 314 LSIYNPERTITVKGTVEACANAEIEIMKKLREAFENDMLAV----NQQANLIPGLNLSAL 369
Query: 277 GAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGG 336
G ++TG + + PPS P+ P PE L + VG +IGK G
Sbjct: 370 GI-FSTG------LSVLPPPSGPRGAPPAAPYHPFAYPEQEIVNLFIPTQAVGAIIGKKG 422
Query: 337 AIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIP 395
A I+ L + G IK+ A +R+++I+GP +A + Q RI +
Sbjct: 423 AHIKQLARFAGASIKIAPAEGPDVSERMVIITGPP----------EAQFKAQGRIFGKLK 472
Query: 396 D------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASE 449
+ E + + V S+ G ++GKGG + E++ L+ A + I+ +DQ P E
Sbjct: 473 EENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP---DE 528
Query: 450 NEEVVL-INGEFEAVQEALFQI 470
NEEV++ I G F A Q A +I
Sbjct: 529 NEEVIVRIIGHFFASQTAQRKI 550
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 134/342 (39%), Gaps = 76/342 (22%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV-MEAVSGTEDRLIVISGPAHPDDRIS 377
R+L + VG +IGK G I+++ ++T + + + SG ++ + I A P+
Sbjct: 194 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIH--ATPEGTSE 251
Query: 378 APQDAVLRV------QTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLS 431
A + +L + +T++A IP ++L + +G L+GK G + ++ +
Sbjct: 252 ACR-MILEIMQKEADETKLAEEIP--------LKILAHNGLVGRLIGKEGRNLKKIEHET 302
Query: 432 GAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLN 491
G I I + E + + G EA A +I +LR F D ++N+ N
Sbjct: 303 GTKITISSLQDL--SIYNPERTITVKGTVEACANAEIEIMKKLREAFENDML-AVNQQAN 359
Query: 492 PTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHI 551
I LS G++S G S PPP G
Sbjct: 360 ------------LIPGLNLSALGIFST-GLSVL-------PPPSG--------------- 384
Query: 552 HRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACL 611
P P P+ P F P V + +P V I G+ GA +
Sbjct: 385 -----PRGAPPAAPYHP--------------FAYPEQEIVNLFIPTQAVGAIIGKKGAHI 425
Query: 612 KQIRQISDAKITITDPK-PGATETVIIISGTPEQTHAAQSLI 652
KQ+ + + A I I + P +E ++II+G PE AQ I
Sbjct: 426 KQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI 467
>gi|291409713|ref|XP_002721143.1| PREDICTED: poly(rC) binding protein 2-like isoform 2 [Oryctolagus
cuniculus]
Length = 340
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 88/157 (56%), Gaps = 11/157 (7%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTNAIFKA 71
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I+ ++ ++ + V RL+V ++Q G L+GKGG I E+R+ +GA
Sbjct: 72 FAM--IIDKLEEDISSSMTNSTAASRPLVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
+++ G D +P + E + I G +++ E + I
Sbjct: 130 QVQVAG-DMLP---NSTERAITIAGIPQSIIECVKHI 162
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 117/260 (45%), Gaps = 50/260 (19%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T +S+ LRL+V ++Q G L+GKGGC IK
Sbjct: 65 TNAIFKAFAMIIDKL---EEDISSSMTNSTAASRPLVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIP 258
+I D LP +++ + I G ++ + +K I +L++ P+ +IP
Sbjct: 122 EIRESTGAQVQVAGDMLPN---STERAITIAGIPQSIIECVKHICVVMLESPPKG-VTIP 177
Query: 259 GNPTGPSHPL------------PDHSVSSQGAPYATGHRDVADIH-LPMPPS-IPKFH-E 303
P S P+ D + + QG YA D+ +H L + S P H
Sbjct: 178 YRPKPSSSPVIFAGGQDRYSTGSDKAYTIQG-QYAIPQPDLTKLHQLAVQQSHFPMTHGN 236
Query: 304 SGVLDRPKPSPEILTF-------------RLLCHDERVGGVIGKGGAIIRSLKQETGCDI 350
+G SPE+ + L ++ +G +IG GA I + Q +G I
Sbjct: 237 TGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGCQGAKINEICQMSGALI 296
Query: 351 KVMEAVSGTEDRLIVISGPA 370
K+ V G+ DR + I+G A
Sbjct: 297 KIANTVEGSTDRQVTITGSA 316
Score = 38.9 bits (89), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%)
Query: 593 VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLI 652
+ +P L+ I G GA + +I Q+S A I I + G+T+ + I+G+ AQ LI
Sbjct: 267 LTIPNDLIGCIIGCQGAKINEICQMSGALIKIANTVEGSTDRQVTITGSAASISLAQYLI 326
Query: 653 QAFVMSET 660
+ SET
Sbjct: 327 NVRLSSET 334
>gi|310790849|gb|EFQ26382.1| KH domain-containing protein [Glomerella graminicola M1.001]
Length = 471
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 90/379 (23%), Positives = 155/379 (40%), Gaps = 55/379 (14%)
Query: 315 EILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDD 374
+ + R + +IGKGG + ++++ +G V + G +R++ +SG D
Sbjct: 110 DWIHIRAVISSPEAATIIGKGGENVSNIRKMSGAKCTVSDYQKGAVERILTVSGVV---D 166
Query: 375 RISAPQDAVLRVQTRIARAIPDN-REQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
+ ++R A P + + +T RLL+ IG ++GKGG+ I E+++ SGA
Sbjct: 167 AAAKAFGLIIRTLNNEPLAEPSSAQSKTYPLRLLIPHILIGSIIGKGGARIREIQEASGA 226
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPT 493
R+ D ++E VV+ G +AV A + + + L D F P
Sbjct: 227 --RLNASDSCLPLSTERSLVVM--GVADAVHIATYYVGSTLLEQ-LNDRF---GGPAASA 278
Query: 494 FLD-------------QVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAV----GGPPPPG 536
+ QV P+ + + G Y N + DA G P P
Sbjct: 279 YATRSGGPAGVVPGGMQVVPYCP-----QPTTGGNYGNRENYNRRHDARAQHPGLPAAPY 333
Query: 537 SFHPHDDHSAFMHHIHRPGMPPHMPD-----------MKPWGPQGLMEVGG-----PMGF 580
P+ H+A + P MP H M+P + + G PM
Sbjct: 334 GAQPYPPHAAQPN----PAMPIHYGAAQAGGYGAAAPMQPHAGAAVPQPHGAHPAQPMHG 389
Query: 581 PDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISG 640
G P + + +P +V I G+ G + +IRQIS + I I +P+ + E ++ I+G
Sbjct: 390 AAVAGAPLTQQ-IYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQDNSNERLVTITG 448
Query: 641 TPEQTHAAQSLIQAFVMSE 659
T E A ++ + + SE
Sbjct: 449 TEECNRMALYMLYSRLESE 467
Score = 39.3 bits (90), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 43/90 (47%), Gaps = 7/90 (7%)
Query: 10 RPHDDDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIMFRVLCPVSKIDGVIGKDGEMMS 69
+PH +P+G +Q + G P + ++ P + +IGK G+ ++
Sbjct: 368 QPHAGAAVPQPHGAHPAQPMHGAAVAGAP-------LTQQIYIPNDMVGAIIGKGGQKIN 420
Query: 70 QISQDTGVTIRVEETVSGSDERLVVIEASD 99
+I Q +G I++ E S+ERLV I ++
Sbjct: 421 EIRQISGSVIKINEPQDNSNERLVTITGTE 450
>gi|302766557|ref|XP_002966699.1| hypothetical protein SELMODRAFT_85231 [Selaginella moellendorffii]
gi|300166119|gb|EFJ32726.1| hypothetical protein SELMODRAFT_85231 [Selaginella moellendorffii]
Length = 324
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 138/344 (40%), Gaps = 79/344 (22%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVM---EAVSGTEDRLIVISGPAHPDDR 375
R L + G VIGKGG+ I + ++G I++ E GT DR+ V+SG
Sbjct: 17 LRFLVTNTAAGSVIGKGGSTISDFQAQSGARIQLSRNHEYFPGTSDRVAVLSG------- 69
Query: 376 ISAPQDAVLRVQTRIARAIPDNRE---QTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSG 432
+ D + Q I++ I D+ + +++ +LLV G ++GKGGS I + + S
Sbjct: 70 --SLADVLTAFQLIISKIIKDDNQDDTKSIQVKLLVPKTVCGAIIGKGGSNIKKFVEDSQ 127
Query: 433 AYIRILGKDQ-IPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLN 491
A I++ +DQ +P + +V I G + + +A+ I T+L
Sbjct: 128 ASIKLSSQDQLLPGVI---DRIVTIGGNVDQIIKAVTLILTKLTEE-------------- 170
Query: 492 PTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHI 551
S + S P +Y P+ V +H S + ++
Sbjct: 171 -------SSYT-----ETTSTPLVYPGTRPTSFIVRCV--------YHA----SPGLQNL 206
Query: 552 HRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACL 611
R G P MP +VG V + +P + I G G L
Sbjct: 207 RRNGPGPPMP-------------------VAYVGALTSSVTIGIPDEHIGFILGRAGKTL 247
Query: 612 KQIRQISDAKITITDPKPGATET---VIIISGTPEQTHAAQSLI 652
++++Q S AKI ++D T T + + G+ E AAQ L+
Sbjct: 248 QELQQSSGAKIKVSDRGDFVTGTEYRKVTMIGSGEAIQAAQFLL 291
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 106/246 (43%), Gaps = 53/246 (21%)
Query: 178 DQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI--DKLPTCALAS---------DEVV 226
+Q++TKS + ++LLV T G ++GKGG IK+ D + L+S D +V
Sbjct: 90 NQDDTKSIQ--VKLLVPKTVCGAIIGKGGSNIKKFVEDSQASIKLSSQDQLLPGVIDRIV 147
Query: 227 QITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRD 286
I G VD + KA+ LI +L + S + S PL G R
Sbjct: 148 TIGGNVDQIIKAVTLILTKLTEESSYTETT--------STPL-----------VYPGTRP 188
Query: 287 VADIHLPMPPSIPKFHESGVLDRPKPSPEI-------LTFRLLCH--DERVGGVIGKGGA 337
+ I + + P L R P P + LT + DE +G ++G+ G
Sbjct: 189 TSFIVRCVYHASPGLQN---LRRNGPGPPMPVAYVGALTSSVTIGIPDEHIGFILGRAGK 245
Query: 338 IIRSLKQETGCDIKVMEA---VSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAI 394
++ L+Q +G IKV + V+GTE R + + G A Q A + ++ +++
Sbjct: 246 TLQELQQSSGAKIKVSDRGDFVTGTEYRKVTMIGSGE------AIQAAQFLLTQKVQQSL 299
Query: 395 PDNREQ 400
+ E+
Sbjct: 300 ASDYER 305
>gi|196049606|pdb|2JZX|A Chain A, Pcbp2 Kh1-Kh2 Domains
Length = 160
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 89/157 (56%), Gaps = 11/157 (7%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 5 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTNAIFK- 61
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I+ ++ ++ + V RL+V ++Q G L+GKGG I E+R+ +GA
Sbjct: 62 -AFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 120
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
+++ G D +P + E + I G +++ E + QI
Sbjct: 121 QVQVAG-DMLP---NSTERAITIAGIPQSIIECVKQI 153
>gi|307196422|gb|EFN78011.1| Insulin-like growth factor 2 mRNA-binding protein 1 [Harpegnathos
saltator]
Length = 647
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 144/318 (45%), Gaps = 42/318 (13%)
Query: 178 DQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI----DKLPTCALASD-------EVV 226
D S + L++L + +G ++GKGG IK+I D T + +D ++
Sbjct: 230 DHGAVNSYEITLKILAHNNLIGRIIGKGGNTIKRIMQDTDTKITVSSINDINSFNLERII 289
Query: 227 QITGEVDTVRKALKLISHQLLDNSPRDHESI-PGNPTGPS-HPLPDHSVSSQGAP----- 279
+ G ++ + KA +IS +L + D +++ P + P HP+ S + G
Sbjct: 290 TVKGTIENMSKAESMISSKLRQSYENDLQAMAPQSMMFPGLHPMAMMSTAGMGYSSRGPG 349
Query: 280 -YATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAI 338
Y +G P P + GV P + TF L + VG +IG G+
Sbjct: 350 LYGSGP-------APYPYQSSLQTQQGV---PASDTQETTF-LYIPNNSVGAIIGTKGSH 398
Query: 339 IRSLKQETGCDIKV--ME----AVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIAR 392
IR++ + +G +K+ +E A TE ++ ++ P+ + A ++ + R
Sbjct: 399 IRNIIRFSGASVKIAPLEQDKPAEQQTERKVTIV---GSPESQWKA--QYLIFEKMREEG 453
Query: 393 AIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEE 452
+ + + +LV S Q+G ++GKGG + E+++++G+ I++ + P A E E
Sbjct: 454 YVSGTEDVRLTIEILVPSAQVGRIIGKGGQNVRELQRVTGSVIKLSEQQATPPSADE-ET 512
Query: 453 VVLINGEFEAVQEALFQI 470
V I G F +VQ A +I
Sbjct: 513 TVHIIGPFFSVQSAQRRI 530
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 79/355 (22%), Positives = 137/355 (38%), Gaps = 75/355 (21%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRIS 377
R+L + VG +IG+ G+ IR + Q + + V + G+ ++ I I G +PD+ +
Sbjct: 145 LRILVQSDMVGAIIGRQGSTIRQITQVSRARVDVHRKDNVGSLEKAITIYG--NPDNCTN 202
Query: 378 APQDAVLRVQTRIARAIPDNREQ-------------TVMTRLLVASNQIGCLLGKGGSII 424
A + +L V + A ++ + ++L +N IG ++GKGG+ I
Sbjct: 203 ACKK-ILEVMQQEANNTNKGYDEGSNSDDHGAVNSYEITLKILAHNNLIGRIIGKGGNTI 261
Query: 425 AEMRKLSGAYIRILGKDQIPKCASEN-EEVVLINGEFEAVQEALFQITTRLRHHFFRDAF 483
+ + + I + I S N E ++ + G E + +A I+++LR + D
Sbjct: 262 KRIMQDTDTKITV---SSINDINSFNLERIITVKGTIENMSKAESMISSKLRQSYENDL- 317
Query: 484 PSINRPLNPTFLDQVSPFPSFIGRRELSPPGM-YSNFGPSFHKFDAVGGPPPPGSFHPHD 542
+ + P Q FP +S GM YS+ GP + GP P
Sbjct: 318 ----QAMAP----QSMMFPGLHPMAMMSTAGMGYSSRGPGLYG----SGPAP-------- 357
Query: 543 DHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPI 602
P+ ++ G P + +P + V
Sbjct: 358 --------------YPYQSSLQTQ-----------QGVP--ASDTQETTFLYIPNNSVGA 390
Query: 603 IQGEDGACLKQIRQISDAKITIT-----DPKPGATETVIIISGTPEQTHAAQSLI 652
I G G+ ++ I + S A + I P TE + I G+PE AQ LI
Sbjct: 391 IIGTKGSHIRNIIRFSGASVKIAPLEQDKPAEQQTERKVTIVGSPESQWKAQYLI 445
>gi|353237678|emb|CCA69645.1| related to PBP2-PAB1 binding protein [Piriformospora indica DSM
11827]
Length = 406
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 83/402 (20%), Positives = 152/402 (37%), Gaps = 101/402 (25%)
Query: 279 PYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILT--------FRLLCHDERVGG 330
P H + + L P +P E V + K S T R L +
Sbjct: 61 PNVAAHPQASSVELEKPKDLPAKPEPAVENGQKSSSNAATAPPASTIHMRCLIVTQDASI 120
Query: 331 VIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRI 390
+IGKGG+ + +++++ + V E++ G +R++ +SG DAV + I
Sbjct: 121 IIGKGGSHVNEIREKSNAKVMVSESIPGNPERILNVSGAL----------DAVSKAFGLI 170
Query: 391 ARAIPDN-------REQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQI 443
R I D + V + ++ +++G ++GKGG+ I E+++ SGA + + +
Sbjct: 171 VRRINDEPMGPSVPGSRAVTIKFIIPHSRMGSVIGKGGAKIKEIQEASGARLN-ASEGML 229
Query: 444 PKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSPFPS 503
P E ++ + G +A+ A + I L ++A ++
Sbjct: 230 P---GSTERILSVTGVADAIHIATYYIGNILIQQ--QEAHGAVG---------------- 268
Query: 504 FIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDM 563
+ R+ PP ++ + +GG P + P S P MP
Sbjct: 269 -LSYRQSRPPRAFN---------ETMGGGAPGQQYFPGQYQS------------PMMPAA 306
Query: 564 KPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKIT 623
P GP + + +P LV I G+ GA + +IRQ S ++I
Sbjct: 307 VPSGPLQTQQ-------------------IYIPNDLVGCIIGKGGAKINEIRQTSQSQIK 347
Query: 624 ITDPK-------------PGATETVIIISGTPEQTHAAQSLI 652
I +P P E +++I+G P A ++
Sbjct: 348 IMEPGAVGVGVGGQQAGPPNEGERLVVITGQPHNIQMAVGML 389
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 72/346 (20%), Positives = 135/346 (39%), Gaps = 111/346 (32%)
Query: 184 SSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKLPTCALASDE--------VVQITGEVDTV 235
+S +R L+++ ++GKGG + +I + + E ++ ++G +D V
Sbjct: 104 ASTIHMRCLIVTQDASIIIGKGGSHVNEIREKSNAKVMVSESIPGNPERILNVSGALDAV 163
Query: 236 RKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMP 295
KA LI ++ D P GPS P G R V
Sbjct: 164 SKAFGLIVRRIND-----------EPMGPSVP---------------GSRAV-------- 189
Query: 296 PSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA 355
T + + R+G VIGKGGA I+ +++ +G + E
Sbjct: 190 ----------------------TIKFIIPHSRMGSVIGKGGAKIKEIQEASGARLNASEG 227
Query: 356 -VSGTEDRLIVISGPA--------HPDDRISAPQDAVLRV-----QTRIARA-------- 393
+ G+ +R++ ++G A + + + Q+A V Q+R RA
Sbjct: 228 MLPGSTERILSVTGVADAIHIATYYIGNILIQQQEAHGAVGLSYRQSRPPRAFNETMGGG 287
Query: 394 ------IPDNREQTVM-----------TRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIR 436
P + +M ++ + ++ +GC++GKGG+ I E+R+ S + I+
Sbjct: 288 APGQQYFPGQYQSPMMPAAVPSGPLQTQQIYIPNDLVGCIIGKGGAKINEIRQTSQSQIK 347
Query: 437 ILGKDQIPKCA--------SENEEVVLINGEFEAVQEALFQITTRL 474
I+ + +E E +V+I G+ +Q A+ + RL
Sbjct: 348 IMEPGAVGVGVGGQQAGPPNEGERLVVITGQPHNIQMAVGMLYHRL 393
>gi|224113143|ref|XP_002316405.1| predicted protein [Populus trichocarpa]
gi|222865445|gb|EEF02576.1| predicted protein [Populus trichocarpa]
Length = 334
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 140/351 (39%), Gaps = 63/351 (17%)
Query: 320 RLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV---MEAVSGTEDRLIVISGPAHPDDRI 376
R L + G VIGKGGA I + ++G I++ E GT DR+I++SG DD +
Sbjct: 38 RFLVSNAAAGSVIGKGGATITDFQSQSGARIQLSRNYEFFPGTSDRIIMVSGGI--DDVL 95
Query: 377 SAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIR 436
A + + ++ + I D E + RL+V ++ G ++GKGGSII + S A I+
Sbjct: 96 KAVELIIAKLLSEIPAEDGDEAEPRMRVRLVVPNSACGSIIGKGGSIIKSFIEESHAGIK 155
Query: 437 ILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLD 496
I D K + +V + G E A+ I ++L P ++ ++
Sbjct: 156 ISPLD--TKFFGLTDRLVTVTGTLEEQMHAIDLILSKLTDD------PHYSQTMH----- 202
Query: 497 QVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGM 556
+PF S G F FD + P+ +A+ H P
Sbjct: 203 --APF---------------SYAGVFFSGFDGI----QYACVLPYVATAAYNSMNHGPN- 240
Query: 557 PPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQ 616
G + F V + V + ++ G G + +I Q
Sbjct: 241 ------------------GAAVKFQHNKDDITNSVTIGVADEHIGLVVGRGGRNIMEISQ 282
Query: 617 ISDAKITITDP---KPGATETVIIISGTPEQTHAAQSLIQAFV--MSETET 662
S A++ I+D G T+ I I+G+ AA+ +I V SE ET
Sbjct: 283 TSGARLKISDRGDFMSGTTDRKITITGSQRAIRAAEDMIMQKVSYASERET 333
>gi|426201505|gb|EKV51428.1| hypothetical protein AGABI2DRAFT_182391 [Agaricus bisporus var.
bisporus H97]
Length = 340
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 141/359 (39%), Gaps = 73/359 (20%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT R L + G +IGK G + L+++TG V + + G +R++ +SG +
Sbjct: 25 LTLRALVSTKDAGVIIGKAGKNVADLREQTGVKAGVSKVIPGVHERVLTVSGS------V 78
Query: 377 SAPQDAVLRVQTRIARAIPD----NREQTVMT--RLLVASNQIGCLLGKGGSIIAEMRKL 430
A A + T++ A P + T+ T RLL++ N +G ++G+ G I ++
Sbjct: 79 DAVAKAYTLIITQLVTASPASPVVSSPSTIHTSIRLLISHNLMGTIIGRNGLKIKAIQDN 138
Query: 431 SGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPL 490
SGA + + K+ +P+ E +V + G EA+ A+ +I L + R +
Sbjct: 139 SGARM-VASKEMLPQS---TERIVEVQGAPEAIGRAVEEIGKCLLEDWERGLGTVL---F 191
Query: 491 NPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMH- 549
+P +D D GG GS+ + A
Sbjct: 192 HPGTVD------------------------------DRSGGNRRQGSYSASPQYGAQRRA 221
Query: 550 ----HIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPH--RRVPVVVPRSLVPII 603
++ PP P P Q PP R + +P +V I
Sbjct: 222 NGDGNVRARASPPASPTHSPISSQ----------------PPANLRTQNISIPSDMVGCI 265
Query: 604 QGEDGACLKQIRQISDAKITITD-PKPGATETVIIISGTPEQTHAAQSLIQAFVMSETE 661
G G + +IR++S +KI+I P E + I GTPE A L+ + SE E
Sbjct: 266 IGRSGTKITEIRRLSGSKISIAKAPHDETGERMFTIVGTPEANEKALFLLYNQLESEKE 324
>gi|157114471|ref|XP_001652287.1| igf2 mRNA binding protein, putative [Aedes aegypti]
gi|108877277|gb|EAT41502.1| AAEL006876-PA [Aedes aegypti]
Length = 541
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 148/323 (45%), Gaps = 37/323 (11%)
Query: 175 EVADQE--NTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI----DKLPTCALASD----- 223
EV QE NT + L++L + +G ++GK G IK+I D T + +D
Sbjct: 193 EVMQQEANNTNKGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDINSFN 252
Query: 224 --EVVQITGEVDTVRKALKLISHQLLDNSPRDHESI-PGNPTGPS-HPLPDHSVSSQGAP 279
++ + G +D + + IS +L + D +++ P + P HP+ S + G
Sbjct: 253 LERIITVKGSIDNMSRGESQISAKLRQSYENDLQALAPQSIMFPGLHPMAMMSTAGNGMG 312
Query: 280 YA--TGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEIL-TFRLLCHDERVGGVIGKGG 336
+ TG + PP++P P S ++ T L + VG +IG G
Sbjct: 313 FTGRTGMYPGTSYPMYQPPTVP--------GAPPGSSDVQETTYLYIPNNAVGAIIGTKG 364
Query: 337 AIIRSLKQETGCDIKV--MEA---VSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIA 391
+ IR++ + +G +K+ +EA + +R + I G P+ + A +++
Sbjct: 365 SHIRNIIRFSGASVKIAPLEADKPLEQQTERKVTIVGT--PEAQWKAQYLIFEKMREEGF 422
Query: 392 RAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENE 451
+ D+ TV +LV S Q+G ++GKGG + E+++++G+ I++ + + E
Sbjct: 423 VSGTDDVRLTV--EILVPSAQVGRIIGKGGQNVRELQRVTGSIIKL--PEHTTNTPVDEE 478
Query: 452 EVVLINGEFEAVQEALFQITTRL 474
V I G F +VQ A +I T +
Sbjct: 479 TTVHIIGPFFSVQSAQRRIRTMM 501
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 135/341 (39%), Gaps = 63/341 (18%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRIS 377
RLL E VG +IG+ G+ IR + Q + + V + G+ ++ I I G +P++ S
Sbjct: 129 LRLLVASEMVGAIIGRQGSTIRQITQNSRARVDVHRKDNVGSLEKAITIYG--NPENCTS 186
Query: 378 APQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRI 437
A + R+ + + + + + ++L +N IG ++GK G+ I + + + I +
Sbjct: 187 ACK----RILEVMQQEANNTNKGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITV 242
Query: 438 LGKDQIPKCASEN-EEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLD 496
I S N E ++ + G + + QI+ +LR + D + L P
Sbjct: 243 ---SSINDINSFNLERIITVKGSIDNMSRGESQISAKLRQSYENDL-----QALAP---- 290
Query: 497 QVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGM 556
Q FP L P M S G G PG+ +P M+
Sbjct: 291 QSIMFPG------LHPMAMMSTAGNGMGFTGRTG--MYPGTSYP-------MYQ------ 329
Query: 557 PPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQ 616
PP +P G P G D + +P + V I G G+ ++ I +
Sbjct: 330 PPTVP-------------GAPPGSSDV----QETTYLYIPNNAVGAIIGTKGSHIRNIIR 372
Query: 617 ISDAKITIT-----DPKPGATETVIIISGTPEQTHAAQSLI 652
S A + I P TE + I GTPE AQ LI
Sbjct: 373 FSGASVKIAPLEADKPLEQQTERKVTIVGTPEAQWKAQYLI 413
>gi|328709625|ref|XP_001951678.2| PREDICTED: poly(rC)-binding protein 3-like isoform 1 [Acyrthosiphon
pisum]
Length = 411
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 21/163 (12%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RL+ + VG +IGK G I++ ++E+G I + + +R++ ISG
Sbjct: 13 LTLRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTISGSTE----- 65
Query: 377 SAPQDAVLRVQTRIARAIPDNREQTVMT---------RLLVASNQIGCLLGKGGSIIAEM 427
A A + T++ I +T T RL+V ++Q G L+GKGG+ I E+
Sbjct: 66 -AIYKAFSLICTKVEEFIEMQNGKTGATAIGKCGMTLRLIVPASQCGSLIGKGGNKIKEI 124
Query: 428 RKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
R+ +GA I++ D +P+ E V + G +++ + +F I
Sbjct: 125 REATGAQIQV-ASDVLPQ---STERAVTLTGTRDSITQCIFHI 163
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 406 LLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQE 465
+ V ++ IGC++GKGG+ IAE+R++SGA IRI + AS + + I G ++V
Sbjct: 318 MTVPNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEDREGSAS-TDRTITITGNPDSVAL 376
Query: 466 ALFQITTRLRHHFFRDAFP 484
A + I R+ A P
Sbjct: 377 AQYLINMRISMETAGLALP 395
Score = 40.0 bits (92), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 593 VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPK----PGATETVIIISGTPEQTHAA 648
+ VP L+ I G+ G + +IRQIS A I I++ + +T+ I I+G P+ A
Sbjct: 318 MTVPNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEDREGSASTDRTITITGNPDSVALA 377
Query: 649 QSLIQAFVMSET 660
Q LI + ET
Sbjct: 378 QYLINMRISMET 389
Score = 38.9 bits (89), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
Query: 396 DNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVL 455
D+ ++ RL++ ++G ++GK G I+ R+ SGA I I D S E +V
Sbjct: 7 DDSNISLTLRLIMQGKEVGSIIGKKGEIVKRFREESGAKINI--SD-----GSCPERIVT 59
Query: 456 INGEFEAVQEALFQITTRLRHHF 478
I+G EA+ +A I T++
Sbjct: 60 ISGSTEAIYKAFSLICTKVEEFI 82
>gi|340521021|gb|EGR51256.1| predicted protein [Trichoderma reesei QM6a]
Length = 475
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 150/390 (38%), Gaps = 84/390 (21%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
+ R + +IGKGG + ++++ + V + G +R++ +SG
Sbjct: 119 IHIRAVISSPEAATIIGKGGENVSNIRKMSNAKCTVSDYQKGAVERILTVSGIV------ 172
Query: 377 SAPQDAVLRVQTRIARAIPDN--------REQTVMTRLLVASNQIGCLLGKGGSIIAEMR 428
DAV + I R + + +T RLL+ IG ++GKGGS I E++
Sbjct: 173 ----DAVAKAFGLIIRTLNNEPLTEASTASSKTYPLRLLIPHILIGSIIGKGGSRIREIQ 228
Query: 429 KLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINR 488
+ SGA R+ D +SE VV+ G +AV A + + + L
Sbjct: 229 EASGA--RLNASDSCLPMSSERSLVVM--GVADAVHIATYYVGSTLLEQLNE----RFGG 280
Query: 489 PLNPTFLDQV-SPFPSFIGRRELSP------PGMYS---NFG------------------ 520
P + + +P S G ++ P G Y N+G
Sbjct: 281 PAASAYATRSGAPVGSIPGGMQVVPYSPQPASGHYGRAENYGRHQERRPHHMPPAPYPQP 340
Query: 521 ---------PSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGL 571
P+ G P G+ PH +P M PH GPQ
Sbjct: 341 YAHGAPHGTPAMPMQYGAGQPAAYGAAAPHV----------QPHMAPHT------GPQAH 384
Query: 572 MEVGGPMGFPDFVGPPHRRVP--VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKP 629
G P G P G P + + +P +V I G+ G + +IRQ+S + I I +P+
Sbjct: 385 ---GAPQGQPMHAGMPGGPITQQIYIPNDMVGAIIGKGGQKINEIRQMSGSVIKINEPQD 441
Query: 630 GATETVIIISGTPEQTHAAQSLIQAFVMSE 659
+ E ++ I+GT E A ++ + + SE
Sbjct: 442 NSNERLVTITGTEECNRMALYMLYSRLESE 471
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 42 FPGG-IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASD 99
PGG I ++ P + +IGK G+ +++I Q +G I++ E S+ERLV I ++
Sbjct: 396 MPGGPITQQIYIPNDMVGAIIGKGGQKINEIRQMSGSVIKINEPQDNSNERLVTITGTE 454
>gi|336273542|ref|XP_003351525.1| hypothetical protein SMAC_00067 [Sordaria macrospora k-hell]
gi|380095805|emb|CCC05851.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 372
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 88/189 (46%), Gaps = 25/189 (13%)
Query: 313 SPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHP 372
S LT R + + G +IGKGG + +L+ ETG V + V G DR++ I+G
Sbjct: 46 SQTTLTLRAIVSSKEAGVIIGKGGQNVANLRDETGVKAGVSKVVQGVHDRVLTITGGC-- 103
Query: 373 DDRISAPQDAVLRVQTRIARAIPDNREQTVM-----------TRLLVASNQIGCLLGKGG 421
DAV + +AR++ + M +LL++ NQ+G ++G+ G
Sbjct: 104 --------DAVSKAYAAVARSLLEGAPSVGMGGVISANGTHPLKLLISHNQMGTVIGRQG 155
Query: 422 SIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRD 481
I ++ +SG + + K+ +P+ E VV + G E ++ A+++I L + R
Sbjct: 156 LKIKHIQDVSGVRM-VAQKEMLPQST---ERVVEVQGTPEGIERAVWEICKCLVDDWQRG 211
Query: 482 AFPSINRPL 490
+ P+
Sbjct: 212 TGTVLYNPV 220
>gi|356576359|ref|XP_003556300.1| PREDICTED: RNA-binding protein Nova-1-like [Glycine max]
Length = 337
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 142/349 (40%), Gaps = 60/349 (17%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVM---EAVSGTEDRLIVISGPAHPDDR 375
R L + G VIGKGG+ I + ++G I++ E GT DR+I++SG + R
Sbjct: 38 IRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNHEFFPGTTDRIIMVSGAINEIQR 97
Query: 376 ISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYI 435
A + + ++ + + ++ E RL+V + G ++GKGG I + S A I
Sbjct: 98 --AVELILSKLLSELHSEDDNDAEPKTKVRLVVPNGSCGGIIGKGGVTIRSFIEDSQAGI 155
Query: 436 RILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFL 495
+I +D +N+ +V++ G F+ A+ I ++L P + +N
Sbjct: 156 KISPQDN--NYYGQNDRLVMLTGTFDEQMRAIELIVSKLAED------PHYAQSMN---- 203
Query: 496 DQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPG 555
SPF S PG+Y F G P + P
Sbjct: 204 ---SPF---------SYPGVY---------FSGYQGVP---------------YTYVLPS 227
Query: 556 MPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIR 615
+ P + + P G GG + + + + V + ++ G G + +I
Sbjct: 228 VAPPAYNAVNYRPNGT--AGGKL--QNSKEERSNSLTMGVADEHIGLVVGRGGRNIMEIS 283
Query: 616 QISDAKITITDPK---PGATETVIIISGTPEQTHAAQSLIQAFVMSETE 661
Q+S A+I I+D G T+ + I+G+ A+S+I V TE
Sbjct: 284 QVSGARIKISDRGDYISGTTDRKVTITGSQRAIRTAESMILQKVAYATE 332
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 113/265 (42%), Gaps = 36/265 (13%)
Query: 154 SKVQKALLLVFERMV-EVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI 212
+++Q+A+ L+ +++ E+ E +N K +RL+V + G ++GKGG I+
Sbjct: 93 NEIQRAVELILSKLLSELHSE-----DDNDAEPKTKVRLVVPNGSCGGIIGKGGVTIRSF 147
Query: 213 DKLPTCALA-----------SDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNP 261
+ + +D +V +TG D +A++LI +L ++ P +S+
Sbjct: 148 IEDSQAGIKISPQDNNYYGQNDRLVMLTGTFDEQMRAIELIVSKLAED-PHYAQSMNSPF 206
Query: 262 TGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRL 321
+ P + QG PY VA P G L K + +
Sbjct: 207 SYPGVYFSGY----QGVPYTYVLPSVAPPAYNAVNYRPNGTAGGKLQNSKEERS-NSLTM 261
Query: 322 LCHDERVGGVIGKGGAIIRSLKQETGCDIKVM---EAVSGTEDRLIVISGPAHPDDRISA 378
DE +G V+G+GG I + Q +G IK+ + +SGT DR + I+G
Sbjct: 262 GVADEHIGLVVGRGGRNIMEISQVSGARIKISDRGDYISGTTDRKVTITG---------- 311
Query: 379 PQDAVLRVQTRIARAIPDNREQTVM 403
Q A+ ++ I + + E+ VM
Sbjct: 312 SQRAIRTAESMILQKVAYATERGVM 336
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 396 DNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVL 455
D+ E+ R LV+++ G ++GKGGS I + + SGA I++ + + +++
Sbjct: 30 DSEEKPTYIRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNHEF--FPGTTDRIIM 87
Query: 456 INGEFEAVQEALFQITTRL 474
++G +Q A+ I ++L
Sbjct: 88 VSGAINEIQRAVELILSKL 106
>gi|194387672|dbj|BAG61249.1| unnamed protein product [Homo sapiens]
Length = 282
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 140/332 (42%), Gaps = 69/332 (20%)
Query: 342 LKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQT 401
+++E+G I + E +R+I ++GP + + A + +++ I+ ++ ++ +
Sbjct: 1 MREESGARINISEG--NCPERIITLAGPTNAIFKAFA--MIIDKLEEDISSSMTNSTAAS 56
Query: 402 ---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLING 458
V RL+V ++Q G L+GKGG I E+R+ +GA +++ G D +P + E + I G
Sbjct: 57 RPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAG-DMLP---NSTERAITIAG 112
Query: 459 EFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSN 518
+++ E + QI + + + P P PS S P +++
Sbjct: 113 IPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPK--------PS-------SSPVIFA- 156
Query: 519 FGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRP---------GMPPHMPDMKP-WGP 568
G K H M H P G+ P++K WG
Sbjct: 157 -GGQLTKL-----------------HQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWGL 198
Query: 569 QGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPK 628
+ H + +P L+ I G GA + +IRQ+S A+I I +P
Sbjct: 199 DASAQT-----------TSHE---LTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPV 244
Query: 629 PGATETVIIISGTPEQTHAAQSLIQAFVMSET 660
G+T+ + I+G+ AQ LI + SET
Sbjct: 245 EGSTDRQVTITGSAASISLAQYLINVRLSSET 276
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 105/242 (43%), Gaps = 34/242 (14%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T +S+ LRL+V ++Q G L+GKGGC IK
Sbjct: 27 TNAIFKAFAMIIDKL---EEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 83
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIP 258
+I D LP + + I + K + ++ + L SP +IP
Sbjct: 84 EIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIP 143
Query: 259 GNPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMP----------PSIPKFHESGVLD 308
P S P+ + + G + H PM S P+ LD
Sbjct: 144 YRPKPSSSPV----IFAGGQLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWGLD 199
Query: 309 RPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
S + + L ++ +G +IG+ GA I ++Q +G IK+ V G+ DR + I+G
Sbjct: 200 ---ASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITG 256
Query: 369 PA 370
A
Sbjct: 257 SA 258
>gi|291234615|ref|XP_002737239.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 1-like
[Saccoglossus kowalevskii]
Length = 655
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 160/352 (45%), Gaps = 41/352 (11%)
Query: 144 MDGLNSEKETSKVQKALL-----LVFERMVEVEPETEVADQENTK-SSKFVLRLLVLSTQ 197
+D L S++ S ++KA+ L VE ET V + E+ S + L+LL ++
Sbjct: 261 VDILRSKENASALEKAINIYGTPLQCSNTVEQIMETMVKENESANPSIEIPLKLLAHNSL 320
Query: 198 VGCLLGKGGCVIKQI-----DKLPTCALAS------DEVVQITGEVDTVRKALKLISHQL 246
VG L+GKGG + +I K+ L + + I G ++ KA +++S +L
Sbjct: 321 VGRLIGKGGTTLNKIMEESNTKVSISNLQELTIYNMERTITIKGSLNDECKAEEMVSEKL 380
Query: 247 LDNSPRDHESIPGNPT---GPSHPLPDHSV-SSQGAPYATGHRDVADIHLPMPPSIPKFH 302
D+ D S+ G +H + +S GA + + A ++ P+ +
Sbjct: 381 RDSFRADMASLTQQYNLFPGLNHASVFSGLGNSPGAIFNVAMHNSAVLYAIFGPAAYTVN 440
Query: 303 ESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTED 361
+L +P EI T+ L VG +IG G IR + Q++ ++V S E+
Sbjct: 441 THHLL---QPPSEI-TY-LFIPISAVGAIIGVKGQEIREISQKSSAKVRVEPPRSEDDEE 495
Query: 362 RLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGG 421
R + I G +PD + A ++ T + + R +++ ++V +N +G ++GK G
Sbjct: 496 RAVYIEG--YPDAQWIAQWFIYHKILTDVCSGKGEVR---LISEIMVPANMVGRIIGKRG 550
Query: 422 SIIAEMRKLSGAYIRILGKDQIPKCAS---ENEEVVLINGEFEAVQEALFQI 470
S I ++ L+GA I +PK +NE VV I G F A Q A QI
Sbjct: 551 SAIQDLELLTGAEI------DVPKNIKPNDKNEVVVRIKGHFFASQSAQRQI 596
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 139/363 (38%), Gaps = 58/363 (15%)
Query: 302 HESGVLDRPKPSPEI-LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVM---EAVS 357
+ES R P I L RLL VG +IGK GA IR + Q+T + ++ E S
Sbjct: 212 NESASGSRLYLYPSIDLPVRLLVPSSMVGAIIGKKGANIRLITQQTKAKVDILRSKENAS 271
Query: 358 GTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLL 417
E + + P + + + +++ +I + +LL ++ +G L+
Sbjct: 272 ALEKAINIYGTPLQCSNTVEQIMETMVKENESANPSIE------IPLKLLAHNSLVGRLI 325
Query: 418 GKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHH 477
GKGG+ + ++ + S + I ++ E + I G +A ++ +LR
Sbjct: 326 GKGGTTLNKIMEESNTKVSISNLQEL--TIYNMERTITIKGSLNDECKAEEMVSEKLRDS 383
Query: 478 FFRDAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGS 537
F D + Q + FP L+ ++S G S P
Sbjct: 384 FRADM---------ASLTQQYNLFPG------LNHASVFSGLGNS-----------PGAI 417
Query: 538 FHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPR 597
F+ +SA ++ I +GP + + PP + +P
Sbjct: 418 FNVAMHNSAVLYAI--------------FGPAAY-----TVNTHHLLQPPSEITYLFIPI 458
Query: 598 SLVPIIQGEDGACLKQIRQISDAKITITDPKP-GATETVIIISGTPEQTHAAQSLIQAFV 656
S V I G G +++I Q S AK+ + P+ E + I G P+ AQ I +
Sbjct: 459 SAVGAIIGVKGQEIREISQKSSAKVRVEPPRSEDDEERAVYIEGYPDAQWIAQWFIYHKI 518
Query: 657 MSE 659
+++
Sbjct: 519 LTD 521
>gi|395839825|ref|XP_003792776.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 1 [Otolemur garnettii]
Length = 597
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 142/344 (41%), Gaps = 57/344 (16%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV-MEAVSGTEDRLIVISGPAHPDDRIS 377
R+L + VG +IGK G I+++ ++T + + + SG ++ + I A P+
Sbjct: 194 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIH--ATPEGTSE 251
Query: 378 APQDAVLRV------QTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLS 431
A + +L + +T++A IP ++L + +G L+GK G + ++ +
Sbjct: 252 ACR-MILEIMQKEADETKLAEEIP--------LKILAHNGLVGRLIGKEGRNLKKIEHET 302
Query: 432 GAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLN 491
G I I + E + + G EA A +I +LR F D ++N+ N
Sbjct: 303 GTKITISSLQDL--SIYNPERTITVKGTVEACANAEIEIMKKLREAFENDML-AVNQQAN 359
Query: 492 PTFLDQVSPFPSF-IGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHH 550
+S F G L PP GP G PP +HP HS +
Sbjct: 360 LIPGLNLSALGIFSTGLSVLPPPS-----GPR--------GAPPAAPYHPFATHSGYFSS 406
Query: 551 IHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRR-VPVVVPRSLVPIIQGEDGA 609
++ PH + P FP P + V + +P V I G+ GA
Sbjct: 407 LY-----PH----HQFSP-----------FPHHHSYPEQEIVNLFIPTQAVGAIIGKKGA 446
Query: 610 CLKQIRQISDAKITITDPK-PGATETVIIISGTPEQTHAAQSLI 652
+KQ+ + + A I I + P +E ++II+G PE AQ I
Sbjct: 447 HIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI 490
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 106/465 (22%), Positives = 183/465 (39%), Gaps = 127/465 (27%)
Query: 48 FRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSEN 107
R+L P + +IGK+G + I++ T +
Sbjct: 194 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRV---------------------------- 225
Query: 108 LEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERM 167
I R EN+G E V + EG+ +A ++ E M
Sbjct: 226 ---DIHRKENSGAAEKPVTIHA-------TPEGT---------------SEACRMILEIM 260
Query: 168 VEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQID-----KLPTCALAS 222
+ ET++A++ L++L + VG L+GK G +K+I+ K+ +L
Sbjct: 261 QKEADETKLAEE-------IPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQD 313
Query: 223 ------DEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQ 276
+ + + G V+ A I +L + D ++ ++ +P ++S+
Sbjct: 314 LSIYNPERTITVKGTVEACANAEIEIMKKLREAFENDMLAV----NQQANLIPGLNLSAL 369
Query: 277 GAPYATGHRDVADIHLPMPPSIPK-------FH----ESGVLDRPKP------------S 313
G ++TG + + PPS P+ +H SG P
Sbjct: 370 GI-FSTG------LSVLPPPSGPRGAPPAAPYHPFATHSGYFSSLYPHHQFSPFPHHHSY 422
Query: 314 PEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHP 372
PE L + VG +IGK GA I+ L + G IK+ A +R+++I+GP
Sbjct: 423 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPP-- 480
Query: 373 DDRISAPQDAVLRVQTRIARAIPD------NREQTVMTRLLVASNQIGCLLGKGGSIIAE 426
+A + Q RI + + E + + V S+ G ++GKGG + E
Sbjct: 481 --------EAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNE 532
Query: 427 MRKLSGAYIRILGKDQIPKCASENEEVVL-INGEFEAVQEALFQI 470
++ L+ A + I+ +DQ P ENEEV++ I G F A Q A +I
Sbjct: 533 LQNLTSAEV-IVPRDQTP---DENEEVIVRIIGHFFASQTAQRKI 573
>gi|295673384|ref|XP_002797238.1| Poly(rC)-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226282610|gb|EEH38176.1| Poly(rC)-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 495
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 144/371 (38%), Gaps = 48/371 (12%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISA 378
R + IGKGG + +++ +G V + G +R++ +SG
Sbjct: 139 IRAVISSAEAATCIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGM--------- 189
Query: 379 PQDAVLRVQTRIARAIPDN--------REQTVMTRLLVASNQIGCLLGKGGSIIAEMRKL 430
QDAV + I R + + + +T RLL+ IG ++GK G I E+++
Sbjct: 190 -QDAVAKAFGLIIRTLNNEPLEAPSTAQSKTYPLRLLIPHLLIGSIIGKSGVRIREIQEA 248
Query: 431 SGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRD--------- 481
SGA R+ D ++E ++L G +AV A + + L
Sbjct: 249 SGA--RLNASDSCLPLSTERTLIIL--GVADAVHIATYYVAVTLVEQLTERFGGPAASAY 304
Query: 482 AFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPH 541
A S QV P+ + P + P + + GG P
Sbjct: 305 ATRSGGPAGVVPGGMQVVPYIPQPAGGQYGHPDTFKRHQPQGTRAVSTGGYGVPYVHGQP 364
Query: 542 DDHSAFMHHIH-----RPGMP---PHMPDMKPWG-PQGLMEVGGPMGFPDFVGPPHRRVP 592
+H RPG PH P P+G PQ G P P VG P
Sbjct: 365 GQPQMPQQALHYGASSRPGYTGAGPHQPS--PYGAPQPGQVHGAPSSQP--VGGVVPGAP 420
Query: 593 VV----VPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAA 648
V +P +V I G+ GA + +IR +S + I I +P+ + E ++ I+GTPE A
Sbjct: 421 VTQQIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQDNSNERLVTITGTPECNQMA 480
Query: 649 QSLIQAFVMSE 659
++ + + SE
Sbjct: 481 LYMLYSRLESE 491
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 32/52 (61%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
+T ++ ++ VG +IGKGGA I ++ +G IK+ E + +RL+ I+G
Sbjct: 421 VTQQIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQDNSNERLVTITG 472
>gi|380478963|emb|CCF43298.1| KH domain-containing protein [Colletotrichum higginsianum]
Length = 469
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 93/382 (24%), Positives = 152/382 (39%), Gaps = 62/382 (16%)
Query: 315 EILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDD 374
+ + R + VIGKGG + ++++ +G V + G +R++ +SG D
Sbjct: 109 DWIHIRAVISSPEAATVIGKGGENVSNIRKMSGAKCTVSDYQKGAVERILTVSGVV---D 165
Query: 375 RISAPQDAVLRVQTRIARAIPDN-REQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
+ ++R A P + + +T RLL+ IG ++GKGG+ I E+++ SGA
Sbjct: 166 AAAKAFGLIIRTLNNEPLAEPSSAQSKTYPLRLLIPHILIGSIIGKGGARIREIQEASGA 225
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPT 493
R+ D ++E VV+ G +AV A + + + L D F P
Sbjct: 226 --RLNASDSCLPLSTERSLVVM--GVADAVHIATYYVGSTLLEQ-LNDRF---GGPAASA 277
Query: 494 FLD-------------QVSPFPSFIGRRELSP---PGMYSNFGPSFHKFDAV----GGPP 533
+ QV P+ SP G Y N + DA G P
Sbjct: 278 YATRSGGPAGVVPGGMQVVPY---------SPQPTTGNYGNRENYNRRHDARAQHHGLPA 328
Query: 534 PPGSFHPHDDHSAFMHHIHRPGMPPH--------MPDMKPWGPQGLMEVGGPMGF----- 580
P P+ H+A + P MP H P P V P G
Sbjct: 329 APYGAQPYPPHAAQPN----PAMPIHYGAAQAGGYGAAAPMQPHAGAAVPQPHGAHPAQP 384
Query: 581 ---PDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVII 637
G P + + +P +V I G+ G + +IRQIS + I I +P+ + E ++
Sbjct: 385 IHGGAVAGAPLTQQ-IYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQDNSNERLVT 443
Query: 638 ISGTPEQTHAAQSLIQAFVMSE 659
I+GT E A ++ + + SE
Sbjct: 444 ITGTEECNRMALYMLYSRLESE 465
Score = 39.3 bits (90), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 43/90 (47%), Gaps = 7/90 (7%)
Query: 10 RPHDDDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIMFRVLCPVSKIDGVIGKDGEMMS 69
+PH +P+G +Q + G P + ++ P + +IGK G+ ++
Sbjct: 366 QPHAGAAVPQPHGAHPAQPIHGGAVAGAP-------LTQQIYIPNDMVGAIIGKGGQKIN 418
Query: 70 QISQDTGVTIRVEETVSGSDERLVVIEASD 99
+I Q +G I++ E S+ERLV I ++
Sbjct: 419 EIRQISGSVIKINEPQDNSNERLVTITGTE 448
>gi|357137683|ref|XP_003570429.1| PREDICTED: RNA-binding protein Nova-1-like [Brachypodium
distachyon]
Length = 349
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 100/407 (24%), Positives = 165/407 (40%), Gaps = 85/407 (20%)
Query: 277 GAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEI---------LTFRLLCHDER 327
G+PYA+ + A P P P+ +RP+ PE R L +
Sbjct: 5 GSPYASSP-ETAPKRAPRSPPPPQ-------ERPETQPEAEPEDDKEKPTHLRFLVSNTA 56
Query: 328 VGGVIGKGGAIIRSLKQETGCDIKVM---EAVSGTEDRLIVISGPAHPDDRISAPQDAVL 384
G +IGKGG+ I + ++G I++ E GT DR+I++SG D+ I A + L
Sbjct: 57 AGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLF--DEVIKAME---L 111
Query: 385 RVQTRIARAIPDNR-EQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQI 443
++ +A N E RL+V ++ G ++GKGG+ I + S A I+I +D
Sbjct: 112 VLEKLLAEGEEFNEAEARPKFRLVVPNSSCGGIIGKGGATIKAFIEDSHAGIKISPQDN- 170
Query: 444 PKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSPFPS 503
++ +V I G F A++ I ++L ++ P N + SPFP
Sbjct: 171 -NFVGLHDRLVTITGPFNNQMRAIYLILSKLSE--------DVHYPPNLS-----SPFP- 215
Query: 504 FIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDM 563
Y+ G F + P P G P ++ ++
Sbjct: 216 ------------YAGLG-----FPSYPAPVPVGYMIPQVPYNNAVN-------------- 244
Query: 564 KPWGPQGL------MEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQI 617
+GP G + G P+ P + V + + G G + +I Q
Sbjct: 245 --YGPNGYGGRYQNNKPGTPVRSPA-TNDAQESHTIGVADEHIGAVVGRAGRNITEIIQA 301
Query: 618 SDAKITITDPK---PGATETVIIISGTPEQTHAAQSLIQAFVMSETE 661
S A+I I+D G ++ + I+GTPE AA+S+I V + +E
Sbjct: 302 SGARIKISDRGDFIAGTSDRKVTITGTPEAIQAAESMIMQRVSASSE 348
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 85/215 (39%), Gaps = 74/215 (34%)
Query: 169 EVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKLPTCAL-------- 220
E +PE A+ E+ K LR LV +T GC++GKGG I +
Sbjct: 31 ETQPE---AEPEDDKEKPTHLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHEF 87
Query: 221 ---ASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQG 277
+D ++ ++G D V KA++L+ +LL
Sbjct: 88 FPGTNDRIIMVSGLFDEVIKAMELVLEKLL------------------------------ 117
Query: 278 APYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGA 337
A G +F+E+ RPK FRL+ + GG+IGKGGA
Sbjct: 118 ---AEGE---------------EFNEAEA--RPK-------FRLVVPNSSCGGIIGKGGA 150
Query: 338 IIRSLKQETGCDIKVM---EAVSGTEDRLIVISGP 369
I++ +++ IK+ G DRL+ I+GP
Sbjct: 151 TIKAFIEDSHAGIKISPQDNNFVGLHDRLVTITGP 185
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 105/263 (39%), Gaps = 57/263 (21%)
Query: 137 VNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLST 196
N+ +++ GL E V KA+ LV E+++ ++ N ++ RL+V ++
Sbjct: 91 TNDRIIMVSGLFDE-----VIKAMELVLEKLLAE------GEEFNEAEARPKFRLVVPNS 139
Query: 197 QVGCLLGKGGCVIKQIDKLPTCALA-----------SDEVVQITGEVDTVRKALKLISHQ 245
G ++GKGG IK + + D +V ITG + +A+ LI +
Sbjct: 140 SCGGIIGKGGATIKAFIEDSHAGIKISPQDNNFVGLHDRLVTITGPFNNQMRAIYLILSK 199
Query: 246 LLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHE-- 303
L ++ P N + P P S AP G+ M P +P +
Sbjct: 200 LSEDV-----HYPPNLSSP-FPYAGLGFPSYPAPVPVGY---------MIPQVPYNNAVN 244
Query: 304 ------SGVLDRPKPSPEIL---------TFRLLCHDERVGGVIGKGGAIIRSLKQETGC 348
G KP + + + DE +G V+G+ G I + Q +G
Sbjct: 245 YGPNGYGGRYQNNKPGTPVRSPATNDAQESHTIGVADEHIGAVVGRAGRNITEIIQASGA 304
Query: 349 DIKVMEA---VSGTEDRLIVISG 368
IK+ + ++GT DR + I+G
Sbjct: 305 RIKISDRGDFIAGTSDRKVTITG 327
>gi|312079807|ref|XP_003142332.1| hypothetical protein LOAG_06748 [Loa loa]
gi|307762504|gb|EFO21738.1| hypothetical protein LOAG_06748 [Loa loa]
Length = 342
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 114/258 (44%), Gaps = 48/258 (18%)
Query: 405 RLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASEN-EEVVLINGEFEAV 463
++LV + G ++G+GGS I E+R+ +GA +++ +CA ++ E +VL+NGE E +
Sbjct: 118 KVLVHESHAGAVIGRGGSRIKELREKTGAQLKVF-----SRCAPQSTERIVLLNGEVEKI 172
Query: 464 QEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQ--VSPFPSFI-GRRELSPPGMYSNFG 520
+ + I L+ + RP +P + D +S + ++ R +S G ++G
Sbjct: 173 IDCINIIIDVLKEIPIKGPV----RPYDPMYYDPDIISDYGGYVPDRNFISRVGRGRDYG 228
Query: 521 PSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGF 580
GG P + DD + M + + + P M+
Sbjct: 229 --------FGGSVIPSRYPGRDDRYSGMRDM-----------IGRYSPIPAMQT------ 263
Query: 581 PDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISG 640
V +P L I G+ G+ + ++R+ S A+I + + + +I ISG
Sbjct: 264 ----------TQVTIPDELGGAIIGKGGSRINRVREESGAQIEVEPHRDNGGDRIITISG 313
Query: 641 TPEQTHAAQSLIQAFVMS 658
T EQ AAQ L+Q V +
Sbjct: 314 TREQIQAAQYLLQQCVRT 331
Score = 46.2 bits (108), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 88/205 (42%), Gaps = 33/205 (16%)
Query: 189 LRLLVLSTQVGCLLGKGGCVIK--------QIDKLPTCALASDE-VVQITGEVDTVRKAL 239
+++LV + G ++G+GG IK Q+ CA S E +V + GEV+ + +
Sbjct: 117 MKVLVHESHAGAVIGRGGSRIKELREKTGAQLKVFSRCAPQSTERIVLLNGEVEKIIDCI 176
Query: 240 KLISHQLLDNSPRDHESIP-GNPTGPSHPLP-DHSVSSQGAPYATGH---------RDVA 288
+I L + IP P P P+ D + S Y RD
Sbjct: 177 NIIIDVL--------KEIPIKGPVRPYDPMYYDPDIISDYGGYVPDRNFISRVGRGRDYG 228
Query: 289 DIHLPMPPSIPKFHE--SGVLD---RPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLK 343
+P P + SG+ D R P P + T ++ DE G +IGKGG+ I ++
Sbjct: 229 FGGSVIPSRYPGRDDRYSGMRDMIGRYSPIPAMQTTQVTIPDELGGAIIGKGGSRINRVR 288
Query: 344 QETGCDIKVMEAVSGTEDRLIVISG 368
+E+G I+V DR+I ISG
Sbjct: 289 EESGAQIEVEPHRDNGGDRIITISG 313
>gi|47220208|emb|CAF98973.1| unnamed protein product [Tetraodon nigroviridis]
Length = 345
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 144/363 (39%), Gaps = 59/363 (16%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R++ I+GP D
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT--DTIF 71
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + + I ++ ++ + V RL+V ++Q GS+I + G+
Sbjct: 72 KAFAMIAYKFEEDIINSMSNSLATSKPPVTLRLVVPASQC-------GSLIGK----GGS 120
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINR--PLN 491
I+ E E L+ E + +F F S+ P
Sbjct: 121 KIK------------EMREAELLCVIKEGISSDIF----------FCMCVKSVTASPPKG 158
Query: 492 PTFLDQVSPFPS---FIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFH-------PH 541
T + P + F G + + P + FH +A P ++ PH
Sbjct: 159 ATIPYRPKPASTPVIFSGGQVRAEPALQHRC--YFHTVNANENRPVSSAYTIQGPYAIPH 216
Query: 542 DDHSAFMHHIHRPGMP-PHMPDMKPWGPQGLMEVGGPMGFPDFVG----PPHRRVPVVVP 596
D +H + P + P P L + + F G PP + +P
Sbjct: 217 PDQLTKLHQLAMQQTPFTPLGQTTPAFPAFLSQTSFLVAFVSDPGLDATPPASTHELTIP 276
Query: 597 RSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFV 656
L+ I G G + +IRQ+S A+I I + G++E I I+GTP AQ LI A +
Sbjct: 277 NDLIGCIIGRQGTKINEIRQMSGAQIKIANAMEGSSERQITITGTPANISLAQYLINARL 336
Query: 657 MSE 659
SE
Sbjct: 337 TSE 339
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 86/228 (37%), Gaps = 57/228 (25%)
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQIDKLPTCALASDEVVQITGEVDTVRKALKLISHQLLD 248
LRL+V ++Q G L+GKGG IK++ + + + + V+ +
Sbjct: 102 LRLVVPASQCGSLIGKGGSKIKEMREAELLCVIKEGISSDIFFCMCVKS---------VT 152
Query: 249 NSPRDHESIPGNPTGPSHPL-----------------PDHSVSS-QGAPYATGHRDVADI 290
SP +IP P S P+ H+V++ + P ++ +
Sbjct: 153 ASPPKGATIPYRPKPASTPVIFSGGQVRAEPALQHRCYFHTVNANENRPVSSAYTIQGPY 212
Query: 291 HLPMPPSIPKFHESGVLDRP------------------------------KPSPEILTFR 320
+P P + K H+ + P +P T
Sbjct: 213 AIPHPDQLTKLHQLAMQQTPFTPLGQTTPAFPAFLSQTSFLVAFVSDPGLDATPPASTHE 272
Query: 321 LLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
L ++ +G +IG+ G I ++Q +G IK+ A+ G+ +R I I+G
Sbjct: 273 LTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAMEGSSERQITITG 320
>gi|195042483|ref|XP_001991440.1| GH12054 [Drosophila grimshawi]
gi|193901198|gb|EDW00065.1| GH12054 [Drosophila grimshawi]
Length = 611
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 144/321 (44%), Gaps = 39/321 (12%)
Query: 175 EVADQE--NTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI----DKLPTCALASD----- 223
EV QE +T + L++L + +G ++GK G IK+I D T + +D
Sbjct: 151 EVMQQEALSTNKGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDINSYN 210
Query: 224 --EVVQITGEVDTVRKALKLISHQLLDNSPRDHESI-PGNPTGPS-HPLPDHSVSSQGAP 279
++ + G ++ + +A IS +L + D ++I P + P HP+ S G
Sbjct: 211 LERIITVKGLIENMSRAENQISTKLRQSYENDLQAIAPQSLMFPGLHPMAMMSTPGNGMV 270
Query: 280 YATGHRDVADIHLPMP-PSIPKFHES----GVLDRPKPSPEILTFRLLCHDERVGGVIGK 334
+ T MP PS F S V+ P+ T L + VG +IG
Sbjct: 271 FNTS----------MPFPSCQSFAMSKTPASVVPPAFPNDMQETTYLYIPNNAVGAIIGT 320
Query: 335 GGAIIRSLKQETGCDIKVM-----EAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTR 389
G+ IRS+ + + +K+ + + +R + I G P+ + A +++
Sbjct: 321 KGSHIRSIMRFSSASLKIAPLDADKPLDQQTERKVTIVGT--PEGQWKAQYMIFEKMREE 378
Query: 390 IARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASE 449
D+ TV LLVAS+Q+G ++GKGG + E+++++G+ I++ P +
Sbjct: 379 GFMCGTDDVRLTV--ELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLPEHALAPPSGGD 436
Query: 450 NEEVVLINGEFEAVQEALFQI 470
E V I G+F +VQ A +I
Sbjct: 437 EETPVHIIGQFYSVQSAQRRI 457
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 136/347 (39%), Gaps = 75/347 (21%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRIS 377
R+L E VG +IG+ G+ IR++ Q++ + V + G+ ++ I I G +PD+ +
Sbjct: 87 LRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENVGSLEKSITIYG--NPDNCTN 144
Query: 378 APQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRI 437
A + +L V + A+ N+ + + ++L +N IG ++GK G+ I + + + I +
Sbjct: 145 ACKR-ILEVMQQ--EALSTNKGEICL-KILAHNNLIGRIIGKSGNTIKRIMQDTDTKITV 200
Query: 438 LGKDQIPKCASEN-EEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLD 496
I S N E ++ + G E + A QI+T+LR + D L
Sbjct: 201 ---SSINDINSYNLERIITVKGLIENMSRAENQISTKLRQSYEND-------------LQ 244
Query: 497 QVSP----FPSFIGRRELSPP--GMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHH 550
++P FP +S P GM N F + P S P
Sbjct: 245 AIAPQSLMFPGLHPMAMMSTPGNGMVFNTSMPFPSCQSFAMSKTPASVVP---------- 294
Query: 551 IHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGAC 610
P P M + + +P + V I G G+
Sbjct: 295 ---PAFPNDMQET---------------------------TYLYIPNNAVGAIIGTKGSH 324
Query: 611 LKQIRQISDAKITIT-----DPKPGATETVIIISGTPEQTHAAQSLI 652
++ I + S A + I P TE + I GTPE AQ +I
Sbjct: 325 IRSIMRFSSASLKIAPLDADKPLDQQTERKVTIVGTPEGQWKAQYMI 371
>gi|90652817|ref|NP_001035073.1| uncharacterized protein LOC664755 [Danio rerio]
gi|68533566|gb|AAH98540.1| Zgc:110045 [Danio rerio]
Length = 222
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 84/169 (49%), Gaps = 27/169 (15%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + + S +R++ I+G +
Sbjct: 17 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISDGSS--PERIVTITGAS------ 68
Query: 377 SAPQDAVLRVQTRIARAIPD-------NREQT----VMTRLLVASNQIGCLLGKGGSIIA 425
+ + + IA + N T V RL+ ++Q G L+GKGGS I
Sbjct: 69 ----EVIFKAFAMIAEKFEEDILASMINSTVTSRPPVTLRLVFPASQCGSLIGKGGSKIK 124
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRL 474
E+R+ +GA +++ G D +P E V I+G A+ + + I T +
Sbjct: 125 EIRESTGAQVQVAG-DLLP---DSTERAVTISGTPHAITQCVKHICTVM 169
Score = 39.3 bits (90), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 45/110 (40%), Gaps = 10/110 (9%)
Query: 401 TVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEF 460
T+ RLL+ ++G ++GK G + +MR+ SGA I I S E +V I G
Sbjct: 16 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI-------SDGSSPERIVTITGAS 68
Query: 461 EAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSPFP---SFIGR 507
E + +A I + S P L V P S IG+
Sbjct: 69 EVIFKAFAMIAEKFEEDILASMINSTVTSRPPVTLRLVFPASQCGSLIGK 118
>gi|408389667|gb|EKJ69103.1| hypothetical protein FPSE_10721 [Fusarium pseudograminearum CS3096]
Length = 474
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 148/371 (39%), Gaps = 76/371 (20%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
+ R + VIGKGG + ++++ + V + G +R++ +SG
Sbjct: 113 IHVRAVISSPEAATVIGKGGENVSNIRKLSNAKCTVSDYQKGAVERILTVSGIV------ 166
Query: 377 SAPQDAVLRVQTRIARAI---PDNREQTVMT-----RLLVASNQIGCLLGKGGSIIAEMR 428
DAV + I R + P N T + RLL+ IG ++GKGG+ I E++
Sbjct: 167 ----DAVAKAFGLIIRTLNNEPLNESSTASSKTYPLRLLIPHILIGSIIGKGGARIREIQ 222
Query: 429 KLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINR 488
SGA R+ D +SE VV+ G +AV A + + + L D F
Sbjct: 223 DASGA--RLNASDSCLPMSSERSLVVM--GVADAVHIATYYVGSTLLEQ-LNDRF---GG 274
Query: 489 PLNPTFLDQV-SPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAF 547
P + + +P S G ++ P YS S H + ++ H+D +
Sbjct: 275 PAASAYATRSGAPAGSIPGGMQVVP---YSPQPSSGHYGRSE-------NYGRHNDRRS- 323
Query: 548 MHHIH----------------RPGMP-------------------PHMPDMKPWGPQGLM 572
HH+ P MP PHMP P G
Sbjct: 324 -HHLPPAPYPQQYPPHAAAQANPAMPMHYGGAQGGGAYGAAPHAQPHMPPHTGPQPHGGA 382
Query: 573 EVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGAT 632
PMG GP ++ + +P +V I G+ G + +IRQ+S++ I I +P+ +
Sbjct: 383 PQAQPMGGAIPGGPITQQ--IYIPNDMVGAIIGKGGQKINEIRQMSNSVIKINEPQDNSN 440
Query: 633 ETVIIISGTPE 643
E ++ I+GT E
Sbjct: 441 ERLVTITGTEE 451
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 402 VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFE 461
+ ++ + ++ +G ++GKGG I E+R++S + I+I P+ S NE +V I G E
Sbjct: 397 ITQQIYIPNDMVGAIIGKGGQKINEIRQMSNSVIKI----NEPQDNS-NERLVTITGTEE 451
Query: 462 AVQEALFQITTRL 474
+ AL+ + +RL
Sbjct: 452 CNRMALYMLYSRL 464
>gi|357508127|ref|XP_003624352.1| KH domain-containing protein [Medicago truncatula]
gi|355499367|gb|AES80570.1| KH domain-containing protein [Medicago truncatula]
Length = 188
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 42/49 (85%)
Query: 406 LLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVV 454
++VA+N IGCL+GKGGSII EMR+L+ + IRIL K+ +PK AS+++E+V
Sbjct: 34 VIVAANMIGCLIGKGGSIITEMRRLTRSNIRILSKENLPKIASDDDEMV 82
>gi|452989355|gb|EME89110.1| hypothetical protein MYCFIDRAFT_71441 [Pseudocercospora fijiensis
CIRAD86]
Length = 360
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 148/365 (40%), Gaps = 57/365 (15%)
Query: 308 DRPKPSPEI----LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRL 363
+RP+ E LT R + + G +IGK G + L+ +TG V + V G DR+
Sbjct: 28 ERPRTEEEYAQSQLTLRAIVTSKEAGVIIGKAGQNVADLRDKTGVRAGVSKVVPGVHDRV 87
Query: 364 IVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVM-------TRLLVASNQIGCL 416
+ ++G ++ DA V + + +P V+ RLL++ NQ+G +
Sbjct: 88 LTVTGA------LTGISDAYGLVADSLVKGVPQMGMGGVVGNPNTHPIRLLISHNQMGTI 141
Query: 417 LGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRH 476
+G+ G I +++ SG + + K+ +P+ E +V + G E VQ+A+++I L
Sbjct: 142 IGRQGLKIKQIQDASGVRM-VAQKEMLPQS---TERIVEVQGTPEGVQKAVWEIGKCLID 197
Query: 477 HFFRDAFPSINRPLNPTFLDQVSPFPSFIGR-RELSPPGMYSNFGPSFHKFDAVGGPPPP 535
R + P + +P P G P Y+ G + D GG P
Sbjct: 198 DEQRGYGTVLYSPA--VRVQGGAPAPPLNGTGASYGAPRSYNRTG---NGADFTGGQSPS 252
Query: 536 GSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVV 595
S+ P + + G PP P+ G + + +
Sbjct: 253 -SYPPRRNGPS-------DGGPPPRPED---------------------GEDIQTQNISI 283
Query: 596 PRSLVPIIQGEDGACLKQIRQISDAKITITD-PKPGATETVIIISGTPEQTHAAQSLIQA 654
P +V I G G+ + +IR+ S A+I+I P E + I+G P A L+
Sbjct: 284 PADMVGCIIGRGGSKISEIRKSSGARISIAKAPHDETGERMFTITGGPAANEKALYLLYE 343
Query: 655 FVMSE 659
+ +E
Sbjct: 344 NLEAE 348
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 94/206 (45%), Gaps = 31/206 (15%)
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQIDKLPTCAL---------ASDEVVQITGEVDTVRKAL 239
+RLL+ Q+G ++G+ G IKQI + +++ +V++ G + V+KA+
Sbjct: 129 IRLLISHNQMGTIIGRQGLKIKQIQDASGVRMVAQKEMLPQSTERIVEVQGTPEGVQKAV 188
Query: 240 KLISHQLLDNSPRDHESI---------------PGNPTGPSHPLP-DHSVSSQGAPYATG 283
I L+D+ R + ++ P N TG S+ P ++ + GA + G
Sbjct: 189 WEIGKCLIDDEQRGYGTVLYSPAVRVQGGAPAPPLNGTGASYGAPRSYNRTGNGADFTGG 248
Query: 284 HRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLK 343
+ PP + G RP+ +I T + + VG +IG+GG+ I ++
Sbjct: 249 QSPSS-----YPPRRNGPSDGGPPPRPEDGEDIQTQNISIPADMVGCIIGRGGSKISEIR 303
Query: 344 QETGCDIKVMEAV-SGTEDRLIVISG 368
+ +G I + +A T +R+ I+G
Sbjct: 304 KSSGARISIAKAPHDETGERMFTITG 329
>gi|348519757|ref|XP_003447396.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 1 [Oreochromis niloticus]
Length = 611
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 144/356 (40%), Gaps = 46/356 (12%)
Query: 304 SGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQET--GCDIKVMEAVSGTED 361
SG P+P R+L + VG +IGK G I+ + ++T DI E E
Sbjct: 186 SGGYGSPRPRQHDFPLRMLVPTQFVGAIIGKEGNTIKDVTKQTQSKVDIHRKENAGAAEK 245
Query: 362 RLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGG 421
+ + S P + SA +L + + A + + ++L ++ +G L+GK G
Sbjct: 246 PITIHSTP----EGCSAACRMILDIMQKEANETKTTED--IPLKILAHNSLVGRLIGKEG 299
Query: 422 SIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRD 481
+ ++ + +G I I + E + + G +A +A +IT +LR + D
Sbjct: 300 RNLKKIEEDTGTKITISSLQDL--TIYNPERTITVKGSIDACCKAEVEITKKLREAYEND 357
Query: 482 AFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSN----FGPSFHKFDAVGGPPPPGS 537
+IN+ N I L+ G++S+ P+ AV P G
Sbjct: 358 -IAAINQQAN------------LIPGLNLNALGIFSSGLPVLPPAAGPRSAVPAVAPAG- 403
Query: 538 FHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPR 597
++P HS+ + ++ G+PP Q P V + +P
Sbjct: 404 YNPFLSHSSHLSGLY--GVPPASAIPHQHSQQA---------------PEQEVVYLFIPT 446
Query: 598 SLVPIIQGEDGACLKQIRQISDAKITITDPK-PGATETVIIISGTPEQTHAAQSLI 652
V + G+ G +KQ+ + A I I + P TE ++II+GTPE AQ I
Sbjct: 447 QAVGALIGKKGQHIKQLAHFAGASIKIAPAESPDVTERMVIITGTPEAQFKAQGRI 502
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 135/318 (42%), Gaps = 50/318 (15%)
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQID-----KLPTCALAS------DEVVQITGEVDTVRK 237
L++L ++ VG L+GK G +K+I+ K+ +L + + + G +D K
Sbjct: 282 LKILAHNSLVGRLIGKEGRNLKKIEEDTGTKITISSLQDLTIYNPERTITVKGSIDACCK 341
Query: 238 ALKLISHQLLDNSPRDHESIPGNPTG-PSHPLPDHSVSSQGAPY---ATGHRDVADIHLP 293
A I+ +L + D +I P L + S G P A G R P
Sbjct: 342 AEVEITKKLREAYENDIAAINQQANLIPGLNLNALGIFSSGLPVLPPAAGPRSAVPAVAP 401
Query: 294 M---PPSIPKFHESGVLDRP----------KPSPEILTFRLLCHDERVGGVIGKGGAIIR 340
P H SG+ P + +PE L + VG +IGK G I+
Sbjct: 402 AGYNPFLSHSSHLSGLYGVPPASAIPHQHSQQAPEQEVVYLFIPTQAVGALIGKKGQHIK 461
Query: 341 SLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPD--- 396
L G IK+ A S +R+++I+G +A + Q RI + +
Sbjct: 462 QLAHFAGASIKIAPAESPDVTERMVIITGTP----------EAQFKAQGRIFGKLKEENF 511
Query: 397 ---NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEV 453
E + T + V S+ G ++GKGG + E++ L+ A + I+ +DQ P EN+EV
Sbjct: 512 FSAKEEVKLETHIKVPSSAAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENDEV 567
Query: 454 -VLINGEFEAVQEALFQI 470
V I+G F A Q A +I
Sbjct: 568 FVKISGHFFASQTAQRKI 585
>gi|356535513|ref|XP_003536289.1| PREDICTED: RNA-binding protein Nova-1-like [Glycine max]
Length = 337
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 141/349 (40%), Gaps = 60/349 (17%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVM---EAVSGTEDRLIVISGPAHPDDR 375
R L + G VIGKGG+ I + ++G I++ E GT DR+I++SG + R
Sbjct: 38 IRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNHEFFPGTTDRIIMVSGAINEIQR 97
Query: 376 ISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYI 435
A + + ++ + + ++ E RL+V + G ++GKGG+ I + S A I
Sbjct: 98 --AVELILSKLLSELHSEDDNDAEPKTKVRLVVPNGSCGGIIGKGGATIRSFIEDSQAGI 155
Query: 436 RILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFL 495
+I +D +N+ +V + G F+ A+ I ++L P + +N
Sbjct: 156 KISPQDN--NYYGQNDRLVTLTGSFDEQMRAIELIVSKLSED------PHYAQSMN---- 203
Query: 496 DQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPG 555
SPF S PG+Y F G P + P
Sbjct: 204 ---SPF---------SYPGVY---------FSGYQGVP---------------YTYVLPS 227
Query: 556 MPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIR 615
+ P + + P G GG + + + + V + ++ G G + +I
Sbjct: 228 VAPPAYNAVNYRPNG--AAGGKL--QNSKEERSNSLTMGVADEHIGLVVGRGGRNIMEIS 283
Query: 616 QISDAKITITDPK---PGATETVIIISGTPEQTHAAQSLIQAFVMSETE 661
Q S A+I I+D G T+ + I+G+ A+S+I V TE
Sbjct: 284 QASGARIKISDRGDYVSGTTDRKVTITGSQRAIRTAESMILQKVAYATE 332
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 115/265 (43%), Gaps = 36/265 (13%)
Query: 154 SKVQKALLLVFERMVEVEPETEV-ADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI 212
+++Q+A+ L+ +++ +E+ ++ +N K +RL+V + G ++GKGG I+
Sbjct: 93 NEIQRAVELILSKLL-----SELHSEDDNDAEPKTKVRLVVPNGSCGGIIGKGGATIRSF 147
Query: 213 DKLPTCALA-----------SDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNP 261
+ + +D +V +TG D +A++LI +L ++ P +S+
Sbjct: 148 IEDSQAGIKISPQDNNYYGQNDRLVTLTGSFDEQMRAIELIVSKLSED-PHYAQSMNSPF 206
Query: 262 TGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRL 321
+ P + QG PY VA P G L K + +
Sbjct: 207 SYPGVYFSGY----QGVPYTYVLPSVAPPAYNAVNYRPNGAAGGKLQNSKEERS-NSLTM 261
Query: 322 LCHDERVGGVIGKGGAIIRSLKQETGCDIKVM---EAVSGTEDRLIVISGPAHPDDRISA 378
DE +G V+G+GG I + Q +G IK+ + VSGT DR + I+G
Sbjct: 262 GVADEHIGLVVGRGGRNIMEISQASGARIKISDRGDYVSGTTDRKVTITG---------- 311
Query: 379 PQDAVLRVQTRIARAIPDNREQTVM 403
Q A+ ++ I + + E+ VM
Sbjct: 312 SQRAIRTAESMILQKVAYATERGVM 336
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 396 DNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVL 455
D+ E+ R LV+++ G ++GKGGS I + + SGA I++ + + +++
Sbjct: 30 DSEEKPTYIRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNHEF--FPGTTDRIIM 87
Query: 456 INGEFEAVQEALFQITTRL 474
++G +Q A+ I ++L
Sbjct: 88 VSGAINEIQRAVELILSKL 106
>gi|366993026|ref|XP_003676278.1| hypothetical protein NCAS_0D03360 [Naumovozyma castellii CBS 4309]
gi|342302144|emb|CCC69917.1| hypothetical protein NCAS_0D03360 [Naumovozyma castellii CBS 4309]
Length = 445
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 103/258 (39%), Gaps = 59/258 (22%)
Query: 34 SENQPSKSFP-GGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERL 92
+E + + FP + R+LC V + V+G GE +S+I +DT I V E + G ER+
Sbjct: 62 AEQEIEEKFPEDNVHLRMLCSVKEASLVVGPKGESISKIKKDTSTRINVSENIRGVPERI 121
Query: 93 VVIE-ASDNKKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEK 151
+ + A DN N+ +I + NEG
Sbjct: 122 IYVRGACDNVANAYLNIAKAIRK-----------------------NEG----------- 147
Query: 152 ETSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQ 211
++F+ E E + E Q + + LL+ +G ++GK G +K+
Sbjct: 148 ----------IIFQGPEEDEKDREEGSQSKSSDELVTIHLLISHHLIGYIIGKHGSRLKE 197
Query: 212 IDKLPTCAL---------ASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPT 262
I++ +C L ++D ++ ITG D ++KA + I +LD HES
Sbjct: 198 IEQTSSCKLYASPDQLFSSNDRILTITGFPDAIQKATRCIGQTILDC----HESTSKKRA 253
Query: 263 GPSHPLPDHSVSSQGAPY 280
P +S S + Y
Sbjct: 254 IFYQPSIGYSALSNSSSY 271
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 93/400 (23%), Positives = 149/400 (37%), Gaps = 115/400 (28%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISA 378
R+LC + V+G G I +K++T I V E + G +R+I + G
Sbjct: 77 LRMLCSVKEASLVVGPKGESISKIKKDTSTRINVSENIRGVPERIIYVRGAC-------- 128
Query: 379 PQDAVLRVQTRIARAIPDNR-----------------------EQTVMTRLLVASNQIGC 415
D V IA+AI N ++ V LL++ + IG
Sbjct: 129 --DNVANAYLNIAKAIRKNEGIIFQGPEEDEKDREEGSQSKSSDELVTIHLLISHHLIGY 186
Query: 416 LLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI----- 470
++GK GS + E+ + S + DQ+ S N+ ++ I G +A+Q+A I
Sbjct: 187 IIGKHGSRLKEIEQTSSCKL-YASPDQL---FSSNDRILTITGFPDAIQKATRCIGQTIL 242
Query: 471 -----TTRLRHHFFRDAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHK 525
T++ R F++ PSI +S S+ G Y+N F++
Sbjct: 243 DCHESTSKKRAIFYQ---PSIG-------YSALSNSSSYYG---------YNNQSQRFYQ 283
Query: 526 FDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGP-----QGLME------- 573
F+ ++ + A P PP M P P Q L +
Sbjct: 284 FN---------KYNSYRSRRA-------PRSPPVMMIPTPVQPIQVTNQTLKQPVYTAET 327
Query: 574 VGGPMGF-PDFVGPPHRRVPVVVPRS--------------------LVPIIQGEDGACLK 612
V F P+FV P R V ++ +S V I G +G +
Sbjct: 328 VANATSFTPNFVLPNVRIVNTIISQSGNNQDSQLMSVQREIYINEEFVGNIIGREGRNIN 387
Query: 613 QIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLI 652
I++ + I I DP G+ E ++I GT + AA LI
Sbjct: 388 SIKETTGCSIFIDDPVEGSYERKLVIKGTQMGSQAAIMLI 427
>gi|389641821|ref|XP_003718543.1| Poly(rC)-binding protein 3 [Magnaporthe oryzae 70-15]
gi|351641096|gb|EHA48959.1| Poly(rC)-binding protein 3 [Magnaporthe oryzae 70-15]
Length = 483
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 84/366 (22%), Positives = 150/366 (40%), Gaps = 35/366 (9%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
+ R + +IGKGG + ++Q + V + G +R++ +SG D +
Sbjct: 126 IHIRAVISSPEAATIIGKGGENVSKIRQMSSAKCTVSDYQKGAVERILTVSGIV---DAV 182
Query: 377 SAPQDAVLRVQTRIARAIPDN-REQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYI 435
+ ++R + P + +T RLL+ IG ++GKGG+ I E+++ SGA
Sbjct: 183 AKAFGLIIRTLNNEPLSEPSSAHSKTYPLRLLIPHILIGSIIGKGGARIKEIQEASGA-- 240
Query: 436 RILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFL 495
R+ D +SE VV+ G +AV A + + + L D F P +
Sbjct: 241 RLNASDSCLPLSSERSLVVM--GVADAVHIATYYVGSTLLEQL-NDRF---GGPAASAYA 294
Query: 496 DQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFH-------PHDDHSAFM 548
+ + P + G ++ D G P P + P+ + +
Sbjct: 295 TRAGGPVGAVPGGMQVVPYLPQPAGGNYGNRDNYGRRPDPRAGQMPPPAAHPYAPQNPYA 354
Query: 549 HHIHRPGMPPHM-PDMKPWGPQGLMEVGGPMGFPDFVGPPHR----RVP----------V 593
H P +PPH +G G G P G PH+ ++P +
Sbjct: 355 PHQPNPAVPPHYGAQAGAYGAHVPAPHVGHAG-PQVHGAPHQPMHGQMPGPGGASLTQQI 413
Query: 594 VVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQ 653
+P +V I G+ G + +IRQ+S + I I +P+ + E ++ I+GT E A ++
Sbjct: 414 YIPNDMVGAIIGKGGQKINEIRQVSGSVIKINEPQDNSNERLVTITGTEECNRMALYMLY 473
Query: 654 AFVMSE 659
+ + SE
Sbjct: 474 SRLESE 479
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%)
Query: 310 PKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
P P LT ++ ++ VG +IGKGG I ++Q +G IK+ E + +RL+ I+G
Sbjct: 402 PGPGGASLTQQIYIPNDMVGAIIGKGGQKINEIRQVSGSVIKINEPQDNSNERLVTITG 460
Score = 38.9 bits (89), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 43 PGGIMF--RVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASD 99
PGG ++ P + +IGK G+ +++I Q +G I++ E S+ERLV I ++
Sbjct: 404 PGGASLTQQIYIPNDMVGAIIGKGGQKINEIRQVSGSVIKINEPQDNSNERLVTITGTE 462
>gi|440634730|gb|ELR04649.1| hypothetical protein GMDG_06931 [Geomyces destructans 20631-21]
Length = 473
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 148/372 (39%), Gaps = 54/372 (14%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISA 378
R + VIGKGG + +++ +G V + G +R++ +SG
Sbjct: 121 IRAVISSAEAATVIGKGGENVTLIRKMSGAKCTVSDYQKGAVERILTVSGVV-------- 172
Query: 379 PQDAVLRVQTRIARAI----------PDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMR 428
DA + I R + P +R T RLLV IG ++GKGG I E++
Sbjct: 173 --DAAAKAFGLIIRTLNGEPLDQPSTPQSR--TYPLRLLVPHVLIGSIIGKGGVRIREIQ 228
Query: 429 KLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFR-----DAF 483
+ SGA R+ D ++E VVL G +AV A + + + L A
Sbjct: 229 EQSGA--RLNASDACLPLSTERSVVVL--GVADAVHIATYYVASTLLEQLTERFGGPTAS 284
Query: 484 PSINRPLNPTFL----DQVSPF-PSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSF 538
R P + QV P+ P G P + N S A G P
Sbjct: 285 AYATRSGGPAGVIPGGMQVVPYVPQPAGGNYGHPDNVRHNDIRSRQTPAAQYGQPYAQGP 344
Query: 539 HPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHR----RVP-- 592
P A MH+ P + P PQ + GGP GPP + VP
Sbjct: 345 GPQQG-GASMHYGGSPAA--GYGGVAPQQPQQVGH-GGPA---SHAGPPAQPMQGVVPGQ 397
Query: 593 -----VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHA 647
+ +P +V I G+ GA + +IRQ+S + I I +P+ + E ++ I+GT E
Sbjct: 398 PLTQQIYIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQDNSNERLVTITGTAECNQM 457
Query: 648 AQSLIQAFVMSE 659
A ++ + + SE
Sbjct: 458 ALYMLYSRLESE 469
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 110/286 (38%), Gaps = 83/286 (29%)
Query: 158 KALLLVFERMVEVEPETEVADQENTKSSK-FVLRLLVLSTQVGCLLGKGGCVIKQIDKLP 216
KA L+ R + EP DQ +T S+ + LRLLV +G ++GKGG I++I +
Sbjct: 177 KAFGLII-RTLNGEP----LDQPSTPQSRTYPLRLLVPHVLIGSIIGKGGVRIREIQEQS 231
Query: 217 TCAL-ASDEV--------VQITGEVDTVRKALKLISHQLLDN----------------SP 251
L ASD V + G D V A ++ LL+ S
Sbjct: 232 GARLNASDACLPLSTERSVVVLGVADAVHIATYYVASTLLEQLTERFGGPTASAYATRSG 291
Query: 252 RDHESIPGN---------PTGPSHPLPDHS-----------VSSQGAPYATG---HRDVA 288
IPG P G ++ PD+ + G PYA G + A
Sbjct: 292 GPAGVIPGGMQVVPYVPQPAGGNYGHPDNVRHNDIRSRQTPAAQYGQPYAQGPGPQQGGA 351
Query: 289 DIHLPMPPSI-----------------PKFHESGVLDRPKPSP-------EILTFRLLCH 324
+H P+ P H P P + LT ++
Sbjct: 352 SMHYGGSPAAGYGGVAPQQPQQVGHGGPASHAG-----PPAQPMQGVVPGQPLTQQIYIP 406
Query: 325 DERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPA 370
++ VG +IGKGGA I ++Q +G IK+ E + +RL+ I+G A
Sbjct: 407 NDMVGAIIGKGGAKINEIRQLSGSVIKINEPQDNSNERLVTITGTA 452
>gi|342880970|gb|EGU81981.1| hypothetical protein FOXB_07505 [Fusarium oxysporum Fo5176]
Length = 471
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 149/370 (40%), Gaps = 75/370 (20%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
+ R + VIGKGG + ++++ + V + G +R++ +SG
Sbjct: 111 IHIRAVISSPEAATVIGKGGENVSNIRKLSNAKCTVSDYQKGAVERILTVSGIV------ 164
Query: 377 SAPQDAVLRVQTRIARAI---PDNREQTVMT-----RLLVASNQIGCLLGKGGSIIAEMR 428
DAV + I R + P N T + RLL+ IG ++GKGG+ I E++
Sbjct: 165 ----DAVAKAFGLIIRTLNNEPLNESSTASSKTYPLRLLIPHILIGSIIGKGGARIREIQ 220
Query: 429 KLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINR 488
+ SGA R+ D +SE VV+ G +AV A + + + L D F
Sbjct: 221 EASGA--RLNASDSCLPMSSERSLVVM--GVADAVHIATYYVGSTLLEQ-LNDRF---GG 272
Query: 489 PLNPTFLDQV-SPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAF 547
P + + +P S G ++ P YS S H + ++ H+D +
Sbjct: 273 PAASAYATRSGAPAGSIPGGMQVVP---YSPQPASGHYGRSE-------NYGRHNDRRS- 321
Query: 548 MHHIH---------------RPGMPPH----------------MPDMKPWG---PQGLME 573
HH+ P MP H P M P P G
Sbjct: 322 -HHMPPAPYPQQYPHAAAQANPAMPMHYGGAQGGGAYGAAPHAQPHMAPHAGPQPHGGAP 380
Query: 574 VGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATE 633
PMG GP ++ + +P +V I G+ G + +IRQ+S++ I I +P+ + E
Sbjct: 381 QAQPMGGAIPGGPITQQ--IYIPNDMVGAIIGKGGQKINEIRQMSNSVIKINEPQDNSNE 438
Query: 634 TVIIISGTPE 643
++ I+GT E
Sbjct: 439 RLVTITGTEE 448
Score = 42.0 bits (97), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 402 VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFE 461
+ ++ + ++ +G ++GKGG I E+R++S + I+I P+ S NE +V I G E
Sbjct: 394 ITQQIYIPNDMVGAIIGKGGQKINEIRQMSNSVIKI----NEPQDNS-NERLVTITGTEE 448
Query: 462 AVQEALFQITTRL 474
+ AL+ + +RL
Sbjct: 449 CNRMALYMLYSRL 461
>gi|348519763|ref|XP_003447399.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 4 [Oreochromis niloticus]
Length = 584
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 141/304 (46%), Gaps = 49/304 (16%)
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQID-----KLPTCALAS------DEVVQITGEVDTVRK 237
L++L ++ VG L+GK G +K+I+ K+ +L + + + G +D K
Sbjct: 282 LKILAHNSLVGRLIGKEGRNLKKIEEDTGTKITISSLQDLTIYNPERTITVKGSIDACCK 341
Query: 238 ALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLP---M 294
A I+ +L + D +I ++ +P ++++ G +++G + P +
Sbjct: 342 AEVEITKKLREAYENDIAAI----NQQANLIPGLNLNALGI-FSSGLPVLPPAAGPPTRI 396
Query: 295 PPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVME 354
PPS P+ +S +PE L + VG +IGK G I+ L G IK+
Sbjct: 397 PPSSPEMSQS--------APEQEVVYLFIPTQAVGALIGKKGQHIKQLAHFAGASIKIAP 448
Query: 355 AVS-GTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPD------NREQTVMTRLL 407
A S +R+++I+G +A + Q RI + + E + T +
Sbjct: 449 AESPDVTERMVIITGTP----------EAQFKAQGRIFGKLKEENFFSAKEEVKLETHIK 498
Query: 408 VASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEV-VLINGEFEAVQEA 466
V S+ G ++GKGG + E++ L+ A + I+ +DQ P EN+EV V I+G F A Q A
Sbjct: 499 VPSSAAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENDEVFVKISGHFFASQTA 554
Query: 467 LFQI 470
+I
Sbjct: 555 QRKI 558
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 136/352 (38%), Gaps = 65/352 (18%)
Query: 304 SGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQET--GCDIKVMEAVSGTED 361
SG P+P R+L + VG +IGK G I+ + ++T DI E E
Sbjct: 186 SGGYGSPRPRQHDFPLRMLVPTQFVGAIIGKEGNTIKDVTKQTQSKVDIHRKENAGAAEK 245
Query: 362 RLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGG 421
+ + S P + SA +L + + A + + ++L ++ +G L+GK G
Sbjct: 246 PITIHSTP----EGCSAACRMILDIMQKEANETKTTED--IPLKILAHNSLVGRLIGKEG 299
Query: 422 SIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRD 481
+ ++ + +G I I + E + + G +A +A +IT +LR + D
Sbjct: 300 RNLKKIEEDTGTKITISSLQDL--TIYNPERTITVKGSIDACCKAEVEITKKLREAYEND 357
Query: 482 AFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPH 541
+IN+ N I L+ G++S+ P PP + P
Sbjct: 358 -IAAINQQAN------------LIPGLNLNALGIFSSGLPVL----------PPAAGPPT 394
Query: 542 DDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVP 601
+PP P+M P+ V + +P V
Sbjct: 395 R-------------IPPSSPEMSQSAPE------------------QEVVYLFIPTQAVG 423
Query: 602 IIQGEDGACLKQIRQISDAKITITDPK-PGATETVIIISGTPEQTHAAQSLI 652
+ G+ G +KQ+ + A I I + P TE ++II+GTPE AQ I
Sbjct: 424 ALIGKKGQHIKQLAHFAGASIKIAPAESPDVTERMVIITGTPEAQFKAQGRI 475
>gi|327267261|ref|XP_003218421.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Anolis carolinensis]
Length = 576
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 143/315 (45%), Gaps = 49/315 (15%)
Query: 178 DQENTKSSKFV-LRLLVLSTQVGCLLGKGGCVIKQID-----KLPTCALAS------DEV 225
+ E TKS++ + L++L ++ VG L+GK G +K+I+ K+ L +
Sbjct: 264 EAEETKSAEEIPLKILAHNSLVGRLIGKEGRNLKKIEQDTGTKITISPLQDLTIYNPERT 323
Query: 226 VQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHR 285
+ + G ++ A I ++L + D ++ ++ +P ++++ G ++TG
Sbjct: 324 ITVKGSIEACSNAEAEIMNKLREAYENDIVTV----NQQANLIPGLNLNALGI-FSTG-- 376
Query: 286 DVADIHLPMPPSIPKFHESGVLD--RPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLK 343
L M PS V P PE L + VG +IGK G I+ L
Sbjct: 377 ------LSMLPSGTGVRRPAVSTPYNPFAVPEQEVVNLFIPTQAVGAIIGKKGQHIKQLA 430
Query: 344 QETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPD------ 396
+ G IK+ A S +R+++I+GP +A + Q RI + +
Sbjct: 431 RFAGASIKIAPAESPEASERMVIITGPP----------EAQFKAQGRIFGKLKEENFFNP 480
Query: 397 NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVL- 455
E + + V S+ G ++GKGG + E++ L+ A + I+ +DQ P ENEEVV+
Sbjct: 481 KEEVKLEAHIKVPSSAAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVVVK 536
Query: 456 INGEFEAVQEALFQI 470
I G F A Q A +I
Sbjct: 537 IIGHFFASQTAQRKI 551
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 135/346 (39%), Gaps = 72/346 (20%)
Query: 314 PEILTF--RLLCHDERVGGVIGKGGAIIRSLKQET--GCDIKVMEAVSGTEDRLIVISGP 369
P+ L F R+L + VG +IGK G I++L ++T DI E E + + + P
Sbjct: 188 PKQLDFPLRILVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRKENAGAAEKPITIHATP 247
Query: 370 AHPDDRISAPQDAVLR--VQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEM 427
+ D + + +T+ A IP ++L ++ +G L+GK G + ++
Sbjct: 248 EGCSEACRMILDIMQKEAEETKSAEEIP--------LKILAHNSLVGRLIGKEGRNLKKI 299
Query: 428 RKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSIN 487
+ +G I I + E + + G EA A +I +LR + D ++N
Sbjct: 300 EQDTGTKITISPLQDL--TIYNPERTITVKGSIEACSNAEAEIMNKLREAYENDIV-TVN 356
Query: 488 RPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAF 547
+ N I L+ G++S G S P G+
Sbjct: 357 QQAN------------LIPGLNLNALGIFST-GLSML---------PSGT---------- 384
Query: 548 MHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGED 607
+ RP + P+ P F P V + +P V I G+
Sbjct: 385 --GVRRPAVS------TPYNP--------------FAVPEQEVVNLFIPTQAVGAIIGKK 422
Query: 608 GACLKQIRQISDAKITITDPK-PGATETVIIISGTPEQTHAAQSLI 652
G +KQ+ + + A I I + P A+E ++II+G PE AQ I
Sbjct: 423 GQHIKQLARFAGASIKIAPAESPEASERMVIITGPPEAQFKAQGRI 468
>gi|300795407|ref|NP_001179433.1| insulin-like growth factor 2 mRNA-binding protein 2 [Bos taurus]
gi|296491332|tpg|DAA33395.1| TPA: insulin-like growth factor 2 mRNA binding protein 2 isoform 1
[Bos taurus]
Length = 599
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 142/343 (41%), Gaps = 55/343 (16%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV-MEAVSGTEDRLIVISGPAHPDDRIS 377
R+L + VG +IGK G I+++ ++T + + + SG ++ + I A P+
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIH--ATPEGTSE 253
Query: 378 APQDAVLRV------QTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLS 431
A + +L + +T++A IP ++L + +G L+GK G + ++ +
Sbjct: 254 ACR-MILEIMQKEADETKLAEEIP--------LKILAHNGLVGRLIGKEGRNLKKIEHET 304
Query: 432 GAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLN 491
G I I + E + + G EA A +I +LR F D ++N+ N
Sbjct: 305 GTKITISSLQDL--SIYNPERTITVKGTVEACANAEIEIMKKLREAFENDML-AVNQQAN 361
Query: 492 PTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHI 551
I LS G++S G PP +HP HS + +
Sbjct: 362 ------------LIPGLNLSALGIFSTGLSVLPPPAGPRGAPPAPPYHPFATHSGYFSSL 409
Query: 552 HRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRR-VPVVVPRSLVPIIQGEDGAC 610
+ PPH +GP FP P + V + +P V I G+ GA
Sbjct: 410 Y----PPHQ-----FGP-----------FPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAH 449
Query: 611 LKQIRQISDAKITITDPK-PGATETVIIISGTPEQTHAAQSLI 652
+KQ+ + + A I I + P +E ++II+G PE AQ I
Sbjct: 450 IKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI 492
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 111/508 (21%), Positives = 197/508 (38%), Gaps = 140/508 (27%)
Query: 14 DDNHTEPNGKEKSQKLAGDYSENQPSKSFPGG--------IMFRVLCPVSKIDGVIGKDG 65
D+ + P+ +++Q+ GD+S + + PGG R+L P + +IGK+G
Sbjct: 157 DEEVSSPSPPQRAQR--GDHSSREQGHA-PGGSSQARQIDFPLRILVPTQFVGAIIGKEG 213
Query: 66 EMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASV 125
+ I++ T + I R EN+G E V
Sbjct: 214 LTIKNITKQTQSRV-------------------------------DIHRKENSGAAEKPV 242
Query: 126 ADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSS 185
+ EG+ +A ++ E M + ET++A++
Sbjct: 243 TIHA-------TPEGT---------------SEACRMILEIMQKEADETKLAEE------ 274
Query: 186 KFVLRLLVLSTQVGCLLGKGGCVIKQID-----KLPTCALAS------DEVVQITGEVDT 234
L++L + VG L+GK G +K+I+ K+ +L + + + G V+
Sbjct: 275 -IPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEA 333
Query: 235 VRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGA---------------- 278
A I +L + D ++ ++ +P ++S+ G
Sbjct: 334 CANAEIEIMKKLREAFENDMLAV----NQQANLIPGLNLSALGIFSTGLSVLPPPAGPRG 389
Query: 279 --------PYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGG 330
P+AT + ++ P H+ G PE L + VG
Sbjct: 390 APPAPPYHPFATHSGYFSSLYPP--------HQFGPFPHHHSYPEQEIVNLFIPTQAVGA 441
Query: 331 VIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRISAPQDAVLRVQTR 389
+IGK GA I+ L + G IK+ A +R+++I+GP +A + Q R
Sbjct: 442 IIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPP----------EAQFKAQGR 491
Query: 390 IARAIPD------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQI 443
I + + E + + V S+ G ++GKGG + E++ L+ A + I+ +DQ
Sbjct: 492 IFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQT 550
Query: 444 PKCASENEEVVL-INGEFEAVQEALFQI 470
P ENEEV++ I G F A Q A +I
Sbjct: 551 P---DENEEVIVRIIGHFFASQTAQRKI 575
>gi|406866225|gb|EKD19265.1| KH domain RNA binding protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 545
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 145/368 (39%), Gaps = 53/368 (14%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
+ R + VIGKGG + S+++ +G V + G +R++ +SG D
Sbjct: 120 IHIRAVITSAEAATVIGKGGENVSSIRKMSGAKCTVSDYQKGAVERILTVSGVV---DAA 176
Query: 377 SAPQDAVLRVQTRIARAIPDN-REQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYI 435
+ ++R P + + +T RLL+ IG ++GKGG I E+++ SGA
Sbjct: 177 AKAFGLIIRTLNNEPLEAPSSAQSKTYPLRLLIPHILIGSIIGKGGVRIREIQEASGA-- 234
Query: 436 RILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFL 495
R+ D ++E VVL G +AV A + + + L F P +
Sbjct: 235 RLNASDSCLPLSTERSLVVL--GVADAVHIATYYVGSTL----FEQLSERFGGPAASAYA 288
Query: 496 D-------------QVSPFPSFIGRRELSPPGMYSNFGPSFHKF--DAVGGPPPPGSFHP 540
QV P+ P NFG H+ + P G P
Sbjct: 289 SRSGGPAGVVPGGMQVVPY---------VPQPAGGNFGHPDHRRHQERPHQTPSQGYNQP 339
Query: 541 HDDH-----SAFMHHIHRPGMPPHMPDMKPWGPQG--LMEVGG---------PMGFPDFV 584
+ H + +H G P GPQ +GG P G P
Sbjct: 340 YSGHGQPQPQQPGNPMHYGGSPVVQGGYGGTGPQQPHQAHMGGPGPHAGPIPPQGGPVVP 399
Query: 585 GPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQ 644
G P + + +P +V I G+ GA + +IRQ+S + I I +P+ + E ++ I+GT E
Sbjct: 400 GQPLTQ-QIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQDNSNERLVTITGTAEC 458
Query: 645 THAAQSLI 652
A ++
Sbjct: 459 NQMALYML 466
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 46/75 (61%), Gaps = 5/75 (6%)
Query: 400 QTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGE 459
Q + ++ + ++ +G ++GKGG+ I E+R+LSG+ I+I P+ S NE +V I G
Sbjct: 401 QPLTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKI----NEPQDNS-NERLVTITGT 455
Query: 460 FEAVQEALFQITTRL 474
E Q AL+ + +RL
Sbjct: 456 AECNQMALYMLYSRL 470
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 58/116 (50%), Gaps = 12/116 (10%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT ++ ++ VG +IGKGGA I ++Q +G IK+ E + +RL+ I+G A +
Sbjct: 403 LTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQDNSNERLVTITGTAECN--- 459
Query: 377 SAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSG 432
Q A+ + +R+ R P ++ ++ +L GG I+A+ SG
Sbjct: 460 ---QMALYMLYSRLERKAPHLKDDFIIDGWYF------TVLFYGGVILAQQVFSSG 506
>gi|115489418|ref|NP_001067196.1| Os12g0597600 [Oryza sativa Japonica Group]
gi|113649703|dbj|BAF30215.1| Os12g0597600, partial [Oryza sativa Japonica Group]
Length = 367
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 123/310 (39%), Gaps = 33/310 (10%)
Query: 364 IVISGPAHPDDRISAPQDAVLRVQTRIARAI------PDNREQTVM-TRLLVASNQIGCL 416
++IS PD + D +LRV RI + P TV TRLLV ++Q G L
Sbjct: 12 VMISAKDEPDAPLPPAVDGLLRVHKRITDGLDGESDQPQRAAGTVGPTRLLVPASQAGSL 71
Query: 417 LGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRH 476
+GK G+ I ++ S +RIL + +P A ++ VV I GE V +A+ I + LR
Sbjct: 72 IGKQGATIKSIQDASKCVLRIL--ESVPPVALSDDRVVEIQGEPLDVHKAVELIASHLRK 129
Query: 477 HFF-RDAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGG--PP 533
R P + + P P P G SN P + PP
Sbjct: 130 FLVDRSVLPLFEMQMKVHNAHREQPMPPPQTWGPPPPWGHPSNVPPGGPGYGGNPQFMPP 189
Query: 534 PPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVG---PPHRR 590
P DH + PH +G P G P G PPH
Sbjct: 190 RP------QDHYYPPPDVPPVEKQPH------YGISSYGRDAPPTGAPPASGNQHPPHGS 237
Query: 591 VPVV----VPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTH 646
+ VP S + G GA + IR+ S A I+I + PG E + ISG+ Q
Sbjct: 238 SQITHSMQVPLSYADAVIGAAGASISYIRRHSGATISIQEGVPG--EMTVEISGSASQVQ 295
Query: 647 AAQSLIQAFV 656
AQ LI+ F+
Sbjct: 296 TAQQLIKNFM 305
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 11/68 (16%)
Query: 190 RLLVLSTQVGCLLGKGG-----------CVIKQIDKLPTCALASDEVVQITGEVDTVRKA 238
RLLV ++Q G L+GK G CV++ ++ +P AL+ D VV+I GE V KA
Sbjct: 60 RLLVPASQAGSLIGKQGATIKSIQDASKCVLRILESVPPVALSDDRVVEIQGEPLDVHKA 119
Query: 239 LKLISHQL 246
++LI+ L
Sbjct: 120 VELIASHL 127
>gi|321475563|gb|EFX86525.1| hypothetical protein DAPPUDRAFT_307836 [Daphnia pulex]
Length = 364
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 88/175 (50%), Gaps = 33/175 (18%)
Query: 310 PKPSPEI-LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
P +P + LT RLL + VG +IGK G I++ ++E+G I + + +R++ I+G
Sbjct: 10 PHDAPSVTLTIRLLMAGKEVGSIIGKKGEIVKRFREESGARINISDG--SCPERIVTITG 67
Query: 369 PAHPDDRISAPQDAVLRVQTRIAR-------------AIPDNREQTVMTRLLVASNQIGC 415
DA+ + I + AIP + RL++ ++Q G
Sbjct: 68 TT----------DAIFKAFNLICKKLEEEVGGPLAGTAIP---RPPITLRLIMPASQCGS 114
Query: 416 LLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
L+GKGGS I E+R+++GA + ++ + +P + E V ++G +A+ + ++ I
Sbjct: 115 LIGKGGSKIKEIREITGASV-VVASEMLP---NSTERAVTVSGTSDAITQCIYHI 165
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 406 LLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQE 465
+ V + IGC++GKGG+ IAE+R++SGA IRI S +E + I G E+V
Sbjct: 273 MAVPNELIGCIIGKGGTKIAEIRQISGAMIRI---SNCEDRESSSERTITITGTAESVAL 329
Query: 466 ALFQITTRL 474
A + I TRL
Sbjct: 330 AQYLINTRL 338
Score = 43.5 bits (101), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 585 GPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDP--KPGATETVIIISGTP 642
G P + + VP L+ I G+ G + +IRQIS A I I++ + ++E I I+GT
Sbjct: 265 GAPQQSQEMAVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEDRESSSERTITITGTA 324
Query: 643 EQTHAAQSLIQAFVMSET 660
E AQ LI + ET
Sbjct: 325 ESVALAQYLINTRLAMET 342
>gi|398397391|ref|XP_003852153.1| hypothetical protein MYCGRDRAFT_109444 [Zymoseptoria tritici
IPO323]
gi|339472034|gb|EGP87129.1| hypothetical protein MYCGRDRAFT_109444 [Zymoseptoria tritici
IPO323]
Length = 362
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 86/364 (23%), Positives = 150/364 (41%), Gaps = 53/364 (14%)
Query: 308 DRPKPSPEI----LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRL 363
+RP+ E LT R + + G +IGK G + L+ +TG V + V G DR+
Sbjct: 28 ERPRTEEEYAQAQLTLRAIVTSKEAGVIIGKAGQNVADLRDKTGVRAGVSKVVPGVHDRV 87
Query: 364 IVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVM-------TRLLVASNQIGCL 416
+ ++G ++ DA V + + P V+ RLL++ NQ+G +
Sbjct: 88 LTVTGA------LTGIADAYGLVADSLVKGAPQMGMGGVVGSPNTHPIRLLISHNQMGTI 141
Query: 417 LGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRH 476
+G+ G I +++ SG + + K+ +P+ E +V + G E +Q+++++I L
Sbjct: 142 IGRQGLKIKQIQDASGVRM-VAQKEMLPQS---TERIVEVQGTPEGIQKSVWEIGKCLID 197
Query: 477 HFFRDAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPG 536
R + +P Q P+ G SP G FG GG P
Sbjct: 198 DEQRGYGTVL---YSPAVRVQGGAPPAING---ASPVG----FG---------GGAPR-- 236
Query: 537 SFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVP 596
SF + + F PP GP ++E G + + + +P
Sbjct: 237 SFARTGNGADFTSGAPASSYPPRRNGGSDAGPPPVVEDGEDIQTQN----------ISIP 286
Query: 597 RSLVPIIQGEDGACLKQIRQISDAKITITD-PKPGATETVIIISGTPEQTHAAQSLIQAF 655
+V I G G+ + +IR+ S A+I+I P + E + I+G P A L+
Sbjct: 287 ADMVGCIIGRGGSKISEIRKSSGARISIAKAPHDESGERMFTITGGPSANEKALYLLYEN 346
Query: 656 VMSE 659
+ +E
Sbjct: 347 LEAE 350
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 85/189 (44%), Gaps = 22/189 (11%)
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQIDKLPTCAL---------ASDEVVQITGEVDTVRKAL 239
+RLL+ Q+G ++G+ G IKQI + +++ +V++ G + ++K++
Sbjct: 129 IRLLISHNQMGTIIGRQGLKIKQIQDASGVRMVAQKEMLPQSTERIVEVQGTPEGIQKSV 188
Query: 240 KLISHQLLDNSPRDHESIPGNPT----GPSHPLPDHSVS---SQGAPYATGHR-DVADIH 291
I L+D+ R + ++ +P G + P + + GAP + + AD
Sbjct: 189 WEIGKCLIDDEQRGYGTVLYSPAVRVQGGAPPAINGASPVGFGGGAPRSFARTGNGADFT 248
Query: 292 LPMPPS-IPKFHESGVLDRPKPSPE----ILTFRLLCHDERVGGVIGKGGAIIRSLKQET 346
P S P G P P E I T + + VG +IG+GG+ I +++ +
Sbjct: 249 SGAPASSYPPRRNGGSDAGPPPVVEDGEDIQTQNISIPADMVGCIIGRGGSKISEIRKSS 308
Query: 347 GCDIKVMEA 355
G I + +A
Sbjct: 309 GARISIAKA 317
>gi|302508471|ref|XP_003016196.1| hypothetical protein ARB_05593 [Arthroderma benhamiae CBS 112371]
gi|291179765|gb|EFE35551.1| hypothetical protein ARB_05593 [Arthroderma benhamiae CBS 112371]
Length = 531
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 82/158 (51%), Gaps = 9/158 (5%)
Query: 316 ILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDR 375
+LT R + + G +IGK G + L+ ETG V + V G DR++ ++GP +
Sbjct: 211 MLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGPLQGTSK 270
Query: 376 -ISAPQDAVLRV--QTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSG 432
S ++L Q + + +N +V RLL++ NQ+G ++G+ G I ++ SG
Sbjct: 271 AYSIVAKSLLEGAPQMGMGGVVQNNGTHSV--RLLISHNQMGTIIGRQGLKIKYIQDASG 328
Query: 433 AYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
+ + K+ +P+ E +V + G E +++A+++I
Sbjct: 329 VRM-VAQKEMLPQS---TERIVEVQGTPEGIEKAIWEI 362
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 105/250 (42%), Gaps = 42/250 (16%)
Query: 158 KALLLVFERMVEVEPETEVAD--QENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKL 215
KA +V + ++E P+ + Q N S +RLL+ Q+G ++G+ G IK I
Sbjct: 270 KAYSIVAKSLLEGAPQMGMGGVVQNNGTHS---VRLLISHNQMGTIIGRQGLKIKYIQDA 326
Query: 216 PTCAL---------ASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNP----- 261
+ +++ +V++ G + + KA+ I L+D+ R ++ NP
Sbjct: 327 SGVRMVAQKEMLPQSTERIVEVQGTPEGIEKAIWEIGKCLIDDWQRGTGTVLYNPAVRAS 386
Query: 262 ----------TGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPK 311
TG + P + SS+ D +D P S + + +R
Sbjct: 387 VGSGSGQGSVTGTN---PSYGGSSRSYNRTGNGADFSD----HPSSYSRRGNNDNPNRGI 439
Query: 312 P-----SPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAV-SGTEDRLIV 365
P E+ T + + VG +IG+GG I +++ +G I + +A T +R+
Sbjct: 440 PLVTEDGEEVQTQNISIPSDMVGCIIGRGGTKISEIRRSSGARISIAKAPHDDTGERMFT 499
Query: 366 ISGPAHPDDR 375
I G A +++
Sbjct: 500 IMGSAQANEK 509
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Query: 392 RAIP---DNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCAS 448
R IP ++ E+ + + S+ +GC++G+GG+ I+E+R+ SGA I I
Sbjct: 437 RGIPLVTEDGEEVQTQNISIPSDMVGCIIGRGGTKISEIRRSSGARISIAKAPH----DD 492
Query: 449 ENEEVVLINGEFEAVQEALFQITTRLRHHFFR 480
E + I G +A ++AL+ + L R
Sbjct: 493 TGERMFTIMGSAQANEKALYLLYENLEAEKMR 524
>gi|440899520|gb|ELR50813.1| Insulin-like growth factor 2 mRNA-binding protein 2 [Bos grunniens
mutus]
Length = 597
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 142/343 (41%), Gaps = 55/343 (16%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV-MEAVSGTEDRLIVISGPAHPDDRIS 377
R+L + VG +IGK G I+++ ++T + + + SG ++ + I A P+
Sbjct: 194 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIH--ATPEGTSE 251
Query: 378 APQDAVLRV------QTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLS 431
A + +L + +T++A IP ++L + +G L+GK G + ++ +
Sbjct: 252 ACR-MILEIMQKEADETKLAEEIP--------LKILAHNGLVGRLIGKEGRNLKKIEHET 302
Query: 432 GAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLN 491
G I I + E + + G EA A +I +LR F D ++N+ N
Sbjct: 303 GTKITISSLQDL--SIYNPERTITVKGTVEACANAEIEIMKKLREAFENDML-AVNQQAN 359
Query: 492 PTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHI 551
I LS G++S G PP +HP HS + +
Sbjct: 360 ------------LIPGLNLSALGIFSTGLSVLPPPAGPRGAPPAPPYHPFATHSGYFSSL 407
Query: 552 HRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRR-VPVVVPRSLVPIIQGEDGAC 610
+ PPH +GP FP P + V + +P V I G+ GA
Sbjct: 408 Y----PPHQ-----FGP-----------FPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAH 447
Query: 611 LKQIRQISDAKITITDPK-PGATETVIIISGTPEQTHAAQSLI 652
+KQ+ + + A I I + P +E ++II+G PE AQ I
Sbjct: 448 IKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI 490
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 111/508 (21%), Positives = 197/508 (38%), Gaps = 140/508 (27%)
Query: 14 DDNHTEPNGKEKSQKLAGDYSENQPSKSFPGG--------IMFRVLCPVSKIDGVIGKDG 65
D+ + P+ +++Q+ GD+S + + PGG R+L P + +IGK+G
Sbjct: 155 DEEVSSPSPPQRAQR--GDHSSREQGHA-PGGSSQARQIDFPLRILVPTQFVGAIIGKEG 211
Query: 66 EMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASV 125
+ I++ T + I R EN+G E V
Sbjct: 212 LTIKNITKQTQSRV-------------------------------DIHRKENSGAAEKPV 240
Query: 126 ADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSS 185
+ EG+ +A ++ E M + ET++A++
Sbjct: 241 TIHA-------TPEGT---------------SEACRMILEIMQKEADETKLAEE------ 272
Query: 186 KFVLRLLVLSTQVGCLLGKGGCVIKQID-----KLPTCALAS------DEVVQITGEVDT 234
L++L + VG L+GK G +K+I+ K+ +L + + + G V+
Sbjct: 273 -IPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEA 331
Query: 235 VRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGA---------------- 278
A I +L + D ++ ++ +P ++S+ G
Sbjct: 332 CANAEIEIMKKLREAFENDMLAV----NQQANLIPGLNLSALGIFSTGLSVLPPPAGPRG 387
Query: 279 --------PYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGG 330
P+AT + ++ P H+ G PE L + VG
Sbjct: 388 APPAPPYHPFATHSGYFSSLYPP--------HQFGPFPHHHSYPEQEIVNLFIPTQAVGA 439
Query: 331 VIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRISAPQDAVLRVQTR 389
+IGK GA I+ L + G IK+ A +R+++I+GP +A + Q R
Sbjct: 440 IIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPP----------EAQFKAQGR 489
Query: 390 IARAIPD------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQI 443
I + + E + + V S+ G ++GKGG + E++ L+ A + I+ +DQ
Sbjct: 490 IFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQT 548
Query: 444 PKCASENEEVVL-INGEFEAVQEALFQI 470
P ENEEV++ I G F A Q A +I
Sbjct: 549 P---DENEEVIVRIIGHFFASQTAQRKI 573
>gi|221060388|ref|XP_002260839.1| RNA-binding protein [Plasmodium knowlesi strain H]
gi|193810913|emb|CAQ42811.1| RNA-binding protein, putative [Plasmodium knowlesi strain H]
Length = 334
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 158/363 (43%), Gaps = 60/363 (16%)
Query: 301 FHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS--- 357
E+ +++ K + ++ ++L ++ G VIGK G+II S++ +TGC +K+ S
Sbjct: 1 MEENNQVEKNKGTNQLCFVKMLVNNLVAGSVIGKNGSIITSIENKTGCSLKLSPTNSYFP 60
Query: 358 GTEDRLIVISGPAHPDDRISAPQDAVL-RVQTRIARAIPDNREQTVM----TRLLVASNQ 412
T++R++V+ G ++I+ +L +++ ++ D + + R+++ +
Sbjct: 61 NTQERVLVLCG---KQEQINNALLIILDKIRQITVQSFQDKQNMNTVPKYTCRIVIPKSA 117
Query: 413 IGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITT 472
++GKGG I +++ +GA I+I ++ NE ++ I G FE++ + ++T
Sbjct: 118 ASAIIGKGGQQIKQLQDSTGAKIQISSRED-----GLNERIISIIGPFESISDTAIKVTN 172
Query: 473 RLRHHFFRDAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGP 532
+++ P++ LN + + + GR LS NF V
Sbjct: 173 SIQND------PNLKDLLNVIY----NKDTNMNGRSSLS-----QNF---------VNQV 208
Query: 533 PPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVP 592
P G P + F H + M +M + LM D P +
Sbjct: 209 PLNGYVVPQ-QYGVFQHEQY---MDVNMMN-------SLMRHS-----RDLFNLPC-EIS 251
Query: 593 VVVPRSLVPIIQGEDGACLKQIRQISDAKITIT---DPKPGATETVIIISGTPEQTHAAQ 649
+ +P + + G++G+ L I + A+I I+ + PG + + I GT H A
Sbjct: 252 IQIPDEFIGSVIGKNGSRLTNIMNSTGAQIRISRKGELIPGTADRKVRIMGTVAAVHGAH 311
Query: 650 SLI 652
L+
Sbjct: 312 VLL 314
>gi|147844462|emb|CAN82085.1| hypothetical protein VITISV_031054 [Vitis vinifera]
Length = 473
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 142/357 (39%), Gaps = 54/357 (15%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRL--------------- 363
FRL+ +VG +IG+ G +I+ + +ET I+V++ GT DR+
Sbjct: 80 FRLIVPVLKVGSIIGRKGELIKKMCEETRARIRVLDGAVGTSDRIGXMEKKMLSVLLKVV 139
Query: 364 ------IVISGPAHPDDRISAPQDAVLRVQTRI---ARAIPDNREQTVMT--RLLVASNQ 412
++ISG P+ +S DAV+RV R+ + + D V T + ++
Sbjct: 140 DNLLEKVLISGREEPEAPLSPAMDAVIRVFKRVTGLSESEGDGLFDQVNTGEHWCICAST 199
Query: 413 IGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITT 472
+ GS + S + +L ++++P A+ +E +V + GE VQ+AL +
Sbjct: 200 VRSWFAHFGSKFQNLXAFS-XEVYLLXQNEVPFYAAADERIVELQGEALKVQKALEAVVG 258
Query: 473 RLRHHFF-RDAFPSINRPLNPTFLDQVSPFPSFIGRREL---SPPGMYSNFGPSFHKFDA 528
LR P R N T + Q ++ + L S GM S++
Sbjct: 259 HLRKFLVDHSVLPLFERTYNAT-ISQDRQSDTWADKSLLHGTSQTGMGSDYS-------- 309
Query: 529 VGGPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVG-GPMGFPDFVGPP 587
P + D M H G+P + + G G+ G G G P
Sbjct: 310 ----LPAKRESLYLDRETQMEH---SGLPMYGQEH---GLSGIRSSGLGRAGAPIVTQIA 359
Query: 588 HRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQ 644
+ +P S I G GA + IR+ S A +T+ + + E + I GT Q
Sbjct: 360 Q---TMQIPLSYAEDIIGIGGANIAYIRRTSGAILTVQESRGLPDEITVEIKGTSSQ 413
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 102/236 (43%), Gaps = 57/236 (24%)
Query: 42 FPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNK 101
+PG +FR++ PV K+ +IG+ GE++ ++ ++T IRV + G+ +R+ +E K
Sbjct: 74 WPGDCVFRLIVPVLKVGSIIGRKGELIKKMCEETRARIRVLDGAVGTSDRIGXME----K 129
Query: 102 KETSENLEAS---IERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQK 158
K S L+ +E+ +GREE E S
Sbjct: 130 KMLSVLLKVVDNLLEKVLISGREEP--------------------------EAPLSPAMD 163
Query: 159 ALLLVFERMVEVEPETE---VADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI--- 212
A++ VF+R+ + E+E + DQ NT + ++ V G + +
Sbjct: 164 AVIRVFKRVTGLS-ESEGDGLFDQVNTGE-----HWCICASTVRSWFAHFGSKFQNLXAF 217
Query: 213 ---------DKLPTCALASDEVVQITGEVDTVRKALK-LISHQLLDNSPRDHESIP 258
+++P A A + +V++ GE V+KAL+ ++ H L DH +P
Sbjct: 218 SXEVYLLXQNEVPFYAAADERIVELQGEALKVQKALEAVVGH--LRKFLVDHSVLP 271
>gi|242093092|ref|XP_002437036.1| hypothetical protein SORBIDRAFT_10g019330 [Sorghum bicolor]
gi|241915259|gb|EER88403.1| hypothetical protein SORBIDRAFT_10g019330 [Sorghum bicolor]
Length = 319
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 76/159 (47%), Gaps = 26/159 (16%)
Query: 318 TFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLI-VISGPAHPDD-- 374
+FR+LC + + G + ++ E+G + V +G R+I + G D
Sbjct: 90 SFRILCPECKAYGF---PPGFVAKVRDESGAFVTVHPPFAGDYVRIIETVDGARREADGR 146
Query: 375 --RISAPQDAVLRVQTRIARAI----------------PDNREQTVMTRLLVASNQIGCL 416
S Q+A+L V RI P +R +T TRL+V +GCL
Sbjct: 147 PPMFSPAQEALLMVHRRILETDADDGDEDGEYGPRGKDPRDRGKTT-TRLIVPKLHVGCL 205
Query: 417 LGKGGSIIAEMRKLSGAYIRILGKDQ-IPKCASENEEVV 454
LGKGG II +MR + +IRIL +DQ P+C S +EEVV
Sbjct: 206 LGKGGKIIEQMRMETKTHIRILPRDQHTPRCVSLSEEVV 244
Score = 39.7 bits (91), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 44/95 (46%), Gaps = 21/95 (22%)
Query: 154 SKVQKALLLVFERMVEVEPETEVAD-------QENTKSSKFVLRLLVLSTQVGCLLGKGG 206
S Q+ALL+V R++E + + D ++ K RL+V VGCLLGKGG
Sbjct: 151 SPAQEALLMVHRRILETDADDGDEDGEYGPRGKDPRDRGKTTTRLIVPKLHVGCLLGKGG 210
Query: 207 CVIKQI--------------DKLPTCALASDEVVQ 227
+I+Q+ P C S+EVVQ
Sbjct: 211 KIIEQMRMETKTHIRILPRDQHTPRCVSLSEEVVQ 245
>gi|344282127|ref|XP_003412826.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Loxodonta africana]
Length = 599
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 142/343 (41%), Gaps = 55/343 (16%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV-MEAVSGTEDRLIVISGPAHPDDRIS 377
R+L + VG +IGK G I+++ ++T + + + SG ++ + I A P+
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIH--ATPEGTSE 253
Query: 378 APQDAVLRV------QTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLS 431
A + +L + +T++A IP ++L + +G L+GK G + ++ +
Sbjct: 254 ACR-MILEIMQKEADETKLAEEIP--------LKILAHNGLVGRLIGKEGRNLKKIEHET 304
Query: 432 GAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLN 491
G I I + E + + G EA A +I +LR F D ++N+ N
Sbjct: 305 GTKITISSLQDL--SIYNPERTITVKGTVEACATAEIEIMKKLREAFENDML-AVNQQAN 361
Query: 492 PTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHI 551
I LS G++S G PP +HP HS + +
Sbjct: 362 ------------LIPGLNLSALGIFSTGLSVLPPPAGPRGAPPAPPYHPFATHSGYFSSL 409
Query: 552 HRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRR-VPVVVPRSLVPIIQGEDGAC 610
+ PPH +GP FP P + V + +P V I G+ GA
Sbjct: 410 Y----PPHQ-----FGP-----------FPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAH 449
Query: 611 LKQIRQISDAKITITDPK-PGATETVIIISGTPEQTHAAQSLI 652
+KQ+ + + A I I + P +E ++II+G PE AQ I
Sbjct: 450 IKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI 492
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 111/508 (21%), Positives = 197/508 (38%), Gaps = 140/508 (27%)
Query: 14 DDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIM--------FRVLCPVSKIDGVIGKDG 65
D+ + P+ +++Q+ GD+S + + PGG R+L P + +IGK+G
Sbjct: 157 DEEVSSPSPPQRAQR--GDHSSREQGHA-PGGASQARQIDFPLRILVPTQFVGAIIGKEG 213
Query: 66 EMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASV 125
+ I++ T + I R EN+G E V
Sbjct: 214 LTIKNITKQTQSRV-------------------------------DIHRKENSGAAEKPV 242
Query: 126 ADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSS 185
+ EG+ +A ++ E M + ET++A++
Sbjct: 243 TI-------HATPEGT---------------SEACRMILEIMQKEADETKLAEE------ 274
Query: 186 KFVLRLLVLSTQVGCLLGKGGCVIKQID-----KLPTCALAS------DEVVQITGEVDT 234
L++L + VG L+GK G +K+I+ K+ +L + + + G V+
Sbjct: 275 -IPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEA 333
Query: 235 VRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGA---------------- 278
A I +L + D ++ ++ +P ++S+ G
Sbjct: 334 CATAEIEIMKKLREAFENDMLAV----NQQANLIPGLNLSALGIFSTGLSVLPPPAGPRG 389
Query: 279 --------PYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGG 330
P+AT + ++ P H+ G PE L + VG
Sbjct: 390 APPAPPYHPFATHSGYFSSLYPP--------HQFGPFPHHHSYPEQEIVNLFIPTQAVGA 441
Query: 331 VIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRISAPQDAVLRVQTR 389
+IGK GA I+ L + G IK+ A +R+++I+GP +A + Q R
Sbjct: 442 IIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPP----------EAQFKAQGR 491
Query: 390 IARAIPD------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQI 443
I + + E + + V S+ G ++GKGG + E++ L+ A + I+ +DQ
Sbjct: 492 IFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQT 550
Query: 444 PKCASENEEVVL-INGEFEAVQEALFQI 470
P ENEEV++ I G F A Q A +I
Sbjct: 551 P---DENEEVIVRIIGHFFASQTAQRKI 575
>gi|45198501|ref|NP_985530.1| AFL018Cp [Ashbya gossypii ATCC 10895]
gi|44984452|gb|AAS53354.1| AFL018Cp [Ashbya gossypii ATCC 10895]
gi|374108759|gb|AEY97665.1| FAFL018Cp [Ashbya gossypii FDAG1]
Length = 392
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 83/370 (22%), Positives = 141/370 (38%), Gaps = 78/370 (21%)
Query: 315 EILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDD 374
+ + R+LC + V+G G I +K ETG I V E + +R++ + G
Sbjct: 46 DYIHMRMLCLVKDASMVVGHKGERISRIKLETGTRINVSENIKNVPERVVFLRGSC---- 101
Query: 375 RISAPQDAVLRVQTRIARAIPD-------NREQTVMTRLLVASNQIGCLLGKGGSIIAEM 427
+ V + +I+RAI D +R + LLV + +G ++GK GS + E+
Sbjct: 102 ------ENVAKAFGKISRAINDEDDRESNDRSLPLTVNLLVPHHLMGYVIGKQGSRLREI 155
Query: 428 RKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSIN 487
LS A + + G Q+P N+ V+ I G +A+ A + + +
Sbjct: 156 EDLSAARL-VAGPQQLP---LSNDRVLCITGVADAIHIATYYVGQTI------------- 198
Query: 488 RPLNPTFLDQVSPFPSFIGRREL--SPPGMYS----NFGPSFHKFDAVGGPPPPGSFHPH 541
+S P + R+ + P M+S N+G + P
Sbjct: 199 ----------LSCEPKYRARKTIFYQPSAMHSVLVNNYGIAIQHQQHHQYHP-------- 240
Query: 542 DDHSAFMHHIHRPGMPPHMPD---MKPWGPQGLMEVGGPMGFPDFVGPPHRRV------- 591
D + P +PP P+ + P G V G + + + PH R+
Sbjct: 241 GDKAKRSRSRMSPALPP-TPNEVVFHSYLPLG-APVPGSLAVANNLALPHVRIVEGINPQ 298
Query: 592 --------PVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPE 643
+ + +V + G G + QI++ + I I DP PG E + I GTP
Sbjct: 299 TRITSVVQEIFIEELMVGNVIGRGGKNITQIKESTGCSIQIADPVPGKDERKLTIIGTPI 358
Query: 644 QTHAAQSLIQ 653
A +I
Sbjct: 359 GNQTAVMMIN 368
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 80/367 (21%), Positives = 130/367 (35%), Gaps = 103/367 (28%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
I R+LC V V+G GE +S+I +TG I V E + ER+V + S
Sbjct: 48 IHMRMLCLVKDASMVVGHKGERISRIKLETGTRINVSENIKNVPERVVFLRGS------C 101
Query: 106 ENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFE 165
EN+ + G+ ++ DE D
Sbjct: 102 ENVAKAF------GKISRAINDEDDR---------------------------------- 121
Query: 166 RMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKLPTCA------ 219
+ N +S + LLV +G ++GK G +++I+ L
Sbjct: 122 -------------ESNDRSLPLTVNLLVPHHLMGYVIGKQGSRLREIEDLSAARLVAGPQ 168
Query: 220 ---LASDEVVQITGEVDTVRKALKLISHQLLDNSP--RDHESIPGNPTGPSHPLPDH--- 271
L++D V+ ITG D + A + +L P R ++I P+ L ++
Sbjct: 169 QLPLSNDRVLCITGVADAIHIATYYVGQTILSCEPKYRARKTIFYQPSAMHSVLVNNYGI 228
Query: 272 ----SVSSQGAPYATGHRDVADIHLPMPPSIPK--FHESGVLDRPKPSPEILTFRL---- 321
Q P R + + +PP+ + FH L P P + L
Sbjct: 229 AIQHQQHHQYHPGDKAKRSRSRMSPALPPTPNEVVFHSYLPLGAPVPGSLAVANNLALPH 288
Query: 322 --------------------LCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTED 361
+ VG VIG+GG I +K+ TGC I++ + V G ++
Sbjct: 289 VRIVEGINPQTRITSVVQEIFIEELMVGNVIGRGGKNITQIKESTGCSIQIADPVPGKDE 348
Query: 362 RLIVISG 368
R + I G
Sbjct: 349 RKLTIIG 355
>gi|115442854|ref|XP_001218234.1| hypothetical protein ATEG_09612 [Aspergillus terreus NIH2624]
gi|114188103|gb|EAU29803.1| hypothetical protein ATEG_09612 [Aspergillus terreus NIH2624]
Length = 355
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 83/168 (49%), Gaps = 9/168 (5%)
Query: 316 ILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDR 375
+LT R + + G +IGK G + L+ ETG V + V G DR++ ++GP H R
Sbjct: 41 MLTLRAIVSSKEAGIIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTGPLHGTAR 100
Query: 376 ISAPQDAVLRV---QTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSG 432
A L Q + + +N V RLL++ NQ+G ++G+ G I ++ SG
Sbjct: 101 AYALVAKGLLEGAPQMGMGGIVSNNGTHPV--RLLISHNQMGTIIGRQGLKIKHIQDASG 158
Query: 433 AYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFR 480
+ + K+ +P+ E +V + G E +++A+++I L + R
Sbjct: 159 VRM-VAQKEMLPQS---TERIVEVQGTPEGIEKAVWEIGKCLIDDWQR 202
>gi|343427422|emb|CBQ70949.1| related to PBP2-PAB1 binding protein [Sporisorium reilianum SRZ2]
Length = 416
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 88/185 (47%), Gaps = 25/185 (13%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
++ R L +IGK G I ++ ++ + + E + G +R++ +SGP
Sbjct: 113 ISMRTLIVTSDASIIIGKSGKHINEIRDKSNARLNISEIIPGNPERILTVSGPL------ 166
Query: 377 SAPQDAVLRVQTRIARAIPDN--------REQTVMTRLLVASNQIGCLLGKGGSIIAEMR 428
DAV + I R I D ++V R +V ++++G ++GK GS I E++
Sbjct: 167 ----DAVSKAFGLIVRRINDEPFDQPSVPGSKSVTIRFIVPNSRMGSVIGKQGSKIKEIQ 222
Query: 429 KLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINR 488
+ SGA + G+ +P E V+ I+G +AV A++ + T L H R+A N
Sbjct: 223 EASGARL-TAGEAMLP---GSTERVLSISGVADAVHIAVYYVGTILLEHQDRNAN---NL 275
Query: 489 PLNPT 493
P PT
Sbjct: 276 PYRPT 280
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 103/232 (44%), Gaps = 30/232 (12%)
Query: 156 VQKALLLVFERMVEVEPETEVADQENTKSSKFV-LRLLVLSTQVGCLLGKGGCVIKQIDK 214
V KA L+ R+ + E DQ + SK V +R +V ++++G ++GK G IK+I +
Sbjct: 169 VSKAFGLIVRRIND-----EPFDQPSVPGSKSVTIRFIVPNSRMGSVIGKQGSKIKEIQE 223
Query: 215 LPTCALASDE---------VVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPT--G 263
L + E V+ I+G D V A+ + LL++ R+ ++P PT G
Sbjct: 224 ASGARLTAGEAMLPGSTERVLSISGVADAVHIAVYYVGTILLEHQDRNANNLPYRPTAGG 283
Query: 264 PSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLC 323
PS P + PYA + P G P P T ++
Sbjct: 284 PSTRPPAPGAN----PYAAPQQPFGYGAPAPPFGGAPAGAGGAPQLP---PGSQTQQIFI 336
Query: 324 HDERVGGVIGKGGAIIRSLKQETGCDIKVME------AVSGTEDRLIVISGP 369
++ VG +IGKGG+ I ++ + IK+ME A +RL+ I+GP
Sbjct: 337 PNDLVGCIIGKGGSKINEIRSMSASHIKIMEPGAGIAAGGSGNERLVTITGP 388
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 405 RLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILG-KDQIPKCASENEEVVLINGEFEAV 463
++ + ++ +GC++GKGGS I E+R +S ++I+I+ I S NE +V I G +
Sbjct: 333 QIFIPNDLVGCIIGKGGSKINEIRSMSASHIKIMEPGAGIAAGGSGNERLVTITGPPPNI 392
Query: 464 QEALFQITTRLRHHFFRDA 482
Q A+ + RL R A
Sbjct: 393 QMAVSLLYQRLEQEKMRLA 411
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 65/139 (46%), Gaps = 10/139 (7%)
Query: 131 NKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPET-EVADQENTKSSKFVL 189
++++D+V+ GSV D S + + + + +V V D T++++ +
Sbjct: 56 SEEKDAVDLGSVTADAATSSADIKPADNSTVSNGQDGEQVAGSAGSVGDSSETQATQISM 115
Query: 190 RLLVLSTQVGCLLGKGGCVIKQIDKLPTCALASDEVV--------QITGEVDTVRKALKL 241
R L++++ ++GK G I +I L E++ ++G +D V KA L
Sbjct: 116 RTLIVTSDASIIIGKSGKHINEIRDKSNARLNISEIIPGNPERILTVSGPLDAVSKAFGL 175
Query: 242 ISHQLLDNSPRDHESIPGN 260
I ++ D P D S+PG+
Sbjct: 176 IVRRINDE-PFDQPSVPGS 193
>gi|327307466|ref|XP_003238424.1| KH domain RNA-binding protein [Trichophyton rubrum CBS 118892]
gi|326458680|gb|EGD84133.1| KH domain RNA-binding protein [Trichophyton rubrum CBS 118892]
Length = 367
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/350 (22%), Positives = 141/350 (40%), Gaps = 45/350 (12%)
Query: 316 ILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDR 375
+LT R + + G +IGK G + L+ ETG V + V G DR++ ++GP +
Sbjct: 47 MLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGPLQGTSK 106
Query: 376 -ISAPQDAVLRV--QTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSG 432
S ++L Q + + +N +V RLL++ NQ+G ++G+ G I ++ SG
Sbjct: 107 AYSIVAKSLLEGAPQMGMGGVVQNNGTHSV--RLLISHNQMGTIIGRQGLKIKYIQDASG 164
Query: 433 AYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNP 492
+ + K+ +P+ E +V + G E +++A+++I L + R + NP
Sbjct: 165 VRM-VAQKEMLPQST---ERIVEVQGTPEGIEKAIWEIGKCLIDDWQRGTGTVL---YNP 217
Query: 493 TFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIH 552
V +P ++G S ++ G F H + +
Sbjct: 218 AVRASVGSSSGQGSVTGTNP-----SYGGSSRSYNRTGNGA---DFSDHPSSYSRRGNND 269
Query: 553 RP--GMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGAC 610
P G+P D G + + +P +V I G G
Sbjct: 270 NPNRGIPLVTED----------------------GEEVQTQNISIPSDMVGCIIGRGGTK 307
Query: 611 LKQIRQISDAKITITD-PKPGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
+ +IR+ S A+I+I P E + I G+ + A L+ + +E
Sbjct: 308 ISEIRRSSGARISIAKAPHDDTGERMFTIMGSAQANEKALYLLYENLEAE 357
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 103/247 (41%), Gaps = 36/247 (14%)
Query: 158 KALLLVFERMVEVEPETEVAD--QENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKL 215
KA +V + ++E P+ + Q N S +RLL+ Q+G ++G+ G IK I
Sbjct: 106 KAYSIVAKSLLEGAPQMGMGGVVQNNGTHS---VRLLISHNQMGTIIGRQGLKIKYIQDA 162
Query: 216 PTCAL---------ASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSH 266
+ +++ +V++ G + + KA+ I L+D+ R ++ NP +
Sbjct: 163 SGVRMVAQKEMLPQSTERIVEVQGTPEGIEKAIWEIGKCLIDDWQRGTGTVLYNPAVRAS 222
Query: 267 PL------------PDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKP-- 312
P + SS+ D +D P S + + +R P
Sbjct: 223 VGSSSGQGSVTGTNPSYGGSSRSYNRTGNGADFSD----HPSSYSRRGNNDNPNRGIPLV 278
Query: 313 ---SPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA-VSGTEDRLIVISG 368
E+ T + + VG +IG+GG I +++ +G I + +A T +R+ I G
Sbjct: 279 TEDGEEVQTQNISIPSDMVGCIIGRGGTKISEIRRSSGARISIAKAPHDDTGERMFTIMG 338
Query: 369 PAHPDDR 375
A +++
Sbjct: 339 SAQANEK 345
>gi|392573629|gb|EIW66768.1| hypothetical protein TREMEDRAFT_65168 [Tremella mesenterica DSM
1558]
Length = 350
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 150/355 (42%), Gaps = 52/355 (14%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
L+ R L + G +IGKGG I ++ +T V + V G +DR+ +SG D +
Sbjct: 25 LSLRALVSTKEAGILIGKGGQTIADIRAKTNVKAGVSKVVPGVQDRVFSVSGAV---DHV 81
Query: 377 SAPQDAVLR--VQTRIARAI--PDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSG 432
+A V R ++T ++ + P RLL++ N +G ++G+ G+ I +++ SG
Sbjct: 82 AAAFAEVARLLLETPLSDSSLPPPPVGAFTSVRLLISHNLMGTVIGRSGAKIKQIQDESG 141
Query: 433 AYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNP 492
A + + K+ +P+ E VV I G EA++ A+ +I L + R+ + +P
Sbjct: 142 ARM-VASKEMLPQS---TERVVEIQGSVEAIKTAVLEIGKCLMEDWERNTGTVL---YHP 194
Query: 493 TFLDQVSPFPSFIGRRELSPPGM----YSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFM 548
+G + ++ G+ S+ PSF GG + +
Sbjct: 195 GAAGDAGVLAGGLGAQTVT-GGLGGIRRSSVAPSF----GFGG----------ERRMSGR 239
Query: 549 HHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVP-VVVPRSLVPIIQGED 607
I P + D P V P+ R + +P +V I G
Sbjct: 240 PSISAPSETRRVSDAPP-----------------MVNDPNLRTQNISIPSDMVGCIIGRG 282
Query: 608 GACLKQIRQISDAKITITD-PKPGATETVIIISGTPEQTHAAQSLIQAFVMSETE 661
G + +IR++S ++I+I P E + I GT + T A L+ + + SE E
Sbjct: 283 GTKITEIRRLSGSRISIAKAPHDETGERMFTIVGTADATERALMLLYSQLESEKE 337
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 140/338 (41%), Gaps = 44/338 (13%)
Query: 170 VEPETEVADQENTKSS--KFVLRLLVLSTQVGCLLGKGGCVIKQIDKLPTCALA------ 221
+ P EV+ N S + LR LV + + G L+GKGG I I
Sbjct: 6 ISPTQEVSSSPNGHSDEPQLSLRALVSTKEAGILIGKGGQTIADIRAKTNVKAGVSKVVP 65
Query: 222 --SDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGP--------SHPLPDH 271
D V ++G VD V A ++ LL+ +P S+P P G SH L
Sbjct: 66 GVQDRVFSVSGAVDHVAAAFAEVARLLLE-TPLSDSSLPPPPVGAFTSVRLLISHNLMGT 124
Query: 272 SVSSQGAPYA-----TGHRDVADIHLPMPPSIPKFHE-SGVLDRPKPSPEILTFRLLCHD 325
+ GA +G R VA + +P S + E G ++ K + + L+
Sbjct: 125 VIGRSGAKIKQIQDESGARMVASKEM-LPQSTERVVEIQGSVEAIKTAVLEIGKCLMEDW 183
Query: 326 ERVGGVI-------GKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISA 378
ER G + G G + L +T V + G + S + R+S
Sbjct: 184 ERNTGTVLYHPGAAGDAGVLAGGLGAQT-----VTGGLGGIRRSSVAPSFGFGGERRMSG 238
Query: 379 -PQDAVLRVQTRIARAIPDNREQTVMTR-LLVASNQIGCLLGKGGSIIAEMRKLSGAYIR 436
P + R++ A P + + T+ + + S+ +GC++G+GG+ I E+R+LSG+ I
Sbjct: 239 RPSISAPSETRRVSDAPPMVNDPNLRTQNISIPSDMVGCIIGRGGTKITEIRRLSGSRIS 298
Query: 437 ILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRL 474
I + P + E + I G +A + AL + ++L
Sbjct: 299 IA---KAPHDET-GERMFTIVGTADATERALMLLYSQL 332
>gi|345796405|ref|XP_535832.3| PREDICTED: insulin-like growth factor 2 mRNA binding protein 2
isoform 2 [Canis lupus familiaris]
Length = 531
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 142/343 (41%), Gaps = 55/343 (16%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV-MEAVSGTEDRLIVISGPAHPDDRIS 377
R+L + VG +IGK G I+++ ++T + + + SG ++ + I A P+
Sbjct: 128 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIH--ATPEGTSE 185
Query: 378 APQDAVLRV------QTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLS 431
A + +L + +T++A IP ++L + +G L+GK G + ++ +
Sbjct: 186 ACR-MILEIMQKEADETKLAEEIP--------LKILAHNGLVGRLIGKEGRNLKKIEHET 236
Query: 432 GAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLN 491
G I I + E + + G EA A +I +LR F D ++N+ N
Sbjct: 237 GTKITISSLQDL--SIYNPERTITVKGTVEACANAEVEIMKKLREAFENDML-AVNQQAN 293
Query: 492 PTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHI 551
I LS G++S G PP +HP HS + +
Sbjct: 294 ------------LIPGLNLSALGIFSTGLSVLPPPAGPRGAPPAPPYHPFATHSGYFSSL 341
Query: 552 HRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRR-VPVVVPRSLVPIIQGEDGAC 610
+ PPH +GP FP P + V + +P V I G+ GA
Sbjct: 342 Y----PPHQ-----FGP-----------FPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAH 381
Query: 611 LKQIRQISDAKITITDPK-PGATETVIIISGTPEQTHAAQSLI 652
+KQ+ + + A I I + P +E ++II+G PE AQ I
Sbjct: 382 IKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI 424
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 111/508 (21%), Positives = 196/508 (38%), Gaps = 140/508 (27%)
Query: 14 DDNHTEPNGKEKSQKLAGDYSENQPSKSFPGG--------IMFRVLCPVSKIDGVIGKDG 65
D+ + P +++Q+ GD+S + + PGG R+L P + +IGK+G
Sbjct: 89 DEEVSSPTPPQRAQR--GDHSSREQGHA-PGGSSQARQIDFPLRILVPTQFVGAIIGKEG 145
Query: 66 EMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASV 125
+ I++ T + I R EN+G E V
Sbjct: 146 LTIKNITKQTQSRV-------------------------------DIHRKENSGAAEKPV 174
Query: 126 ADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSS 185
+ EG+ +A ++ E M + ET++A++
Sbjct: 175 TIHA-------TPEGT---------------SEACRMILEIMQKEADETKLAEE------ 206
Query: 186 KFVLRLLVLSTQVGCLLGKGGCVIKQID-----KLPTCALAS------DEVVQITGEVDT 234
L++L + VG L+GK G +K+I+ K+ +L + + + G V+
Sbjct: 207 -IPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEA 265
Query: 235 VRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGA---------------- 278
A I +L + D ++ ++ +P ++S+ G
Sbjct: 266 CANAEVEIMKKLREAFENDMLAV----NQQANLIPGLNLSALGIFSTGLSVLPPPAGPRG 321
Query: 279 --------PYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGG 330
P+AT + ++ P H+ G PE L + VG
Sbjct: 322 APPAPPYHPFATHSGYFSSLYPP--------HQFGPFPHHHSYPEQEIVNLFIPTQAVGA 373
Query: 331 VIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRISAPQDAVLRVQTR 389
+IGK GA I+ L + G IK+ A +R+++I+GP +A + Q R
Sbjct: 374 IIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPP----------EAQFKAQGR 423
Query: 390 IARAIPD------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQI 443
I + + E + + V S+ G ++GKGG + E++ L+ A + I+ +DQ
Sbjct: 424 IFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQT 482
Query: 444 PKCASENEEVVL-INGEFEAVQEALFQI 470
P ENEEV++ I G F A Q A +I
Sbjct: 483 P---DENEEVIVRIIGHFFASQTAQRKI 507
>gi|224153471|ref|XP_002337357.1| predicted protein [Populus trichocarpa]
gi|222838904|gb|EEE77255.1| predicted protein [Populus trichocarpa]
Length = 103
Score = 64.7 bits (156), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/71 (45%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Query: 402 VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFE 461
++TRLLV S+++GC+LG+G I EMR+L A I + K++ PKCASE+EE+V I+G +
Sbjct: 1 MITRLLVPSSKVGCILGQGSQDINEMRRLQ-AEICVYPKNEKPKCASEDEELVQISGNYG 59
Query: 462 AVQEALFQITT 472
++ L I +
Sbjct: 60 VAKDVLVDIAS 70
Score = 39.7 bits (91), Expect = 5.1, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 12/64 (18%)
Query: 188 VLRLLVLSTQVGCLLGKGGCVIKQIDKL------------PTCALASDEVVQITGEVDTV 235
+ RLLV S++VGC+LG+G I ++ +L P CA +E+VQI+G
Sbjct: 2 ITRLLVPSSKVGCILGQGSQDINEMRRLQAEICVYPKNEKPKCASEDEELVQISGNYGVA 61
Query: 236 RKAL 239
+ L
Sbjct: 62 KDVL 65
>gi|171686672|ref|XP_001908277.1| hypothetical protein [Podospora anserina S mat+]
gi|170943297|emb|CAP68950.1| unnamed protein product [Podospora anserina S mat+]
Length = 386
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 80/362 (22%), Positives = 143/362 (39%), Gaps = 67/362 (18%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
+T R + + G +IGK G + L+ ETG V + V G DR++ I+G
Sbjct: 58 MTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVYDRVLTITGGC------ 111
Query: 377 SAPQDAVLRVQTRIARAIPDNREQTVM-----------TRLLVASNQIGCLLGKGGSIIA 425
+A+ + ++A A+ + M +LL++ NQ+G ++G+ G I
Sbjct: 112 ----EAISKAYAKVASALMEGAPAMGMGGVVAANGTHPIKLLISHNQMGTVIGRQGLKIK 167
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPS 485
++ +SG + + K+ +P+ E VV + G E +Q A ++I L + R
Sbjct: 168 HIQDVSGVRM-VAQKEMLPQS---TERVVEVQGTPEGIQRATWEICKCLVDDWQRGQGTV 223
Query: 486 INRPLNPT-------FLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSF 538
+ P+ T + S +P +E +P G S + + D G P +
Sbjct: 224 LYNPVVRTGTGAGAPAMGGASSYP-----QERAPYGGSSRVTRTGNGADFSNGGPR--QY 276
Query: 539 HPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRS 598
+ D A G P H D G + + +P
Sbjct: 277 NRRSDSDAAQR-----GPPTH----------------------DENGEEIQTQNISIPAD 309
Query: 599 LVPIIQGEDGACLKQIRQISDAKITITD-PKPGATETVIIISGTPEQTHAAQSLIQAFVM 657
+V I G G+ + +IR+ S A+I+I P E + I G+ + A L+ +
Sbjct: 310 MVGCIIGRAGSKISEIRKTSGARISIAKAPHDDTGERMFTIMGSAKANETALYLLYENLE 369
Query: 658 SE 659
+E
Sbjct: 370 AE 371
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 90/213 (42%), Gaps = 27/213 (12%)
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQIDKLPTCAL---------ASDEVVQITGEVDTVRKAL 239
++LL+ Q+G ++G+ G IK I + + +++ VV++ G + +++A
Sbjct: 146 IKLLISHNQMGTVIGRQGLKIKHIQDVSGVRMVAQKEMLPQSTERVVEVQGTPEGIQRAT 205
Query: 240 KLISHQLLDNSPRDHESIPGNPT-------GPSHPLPDHSVSSQGAPYATGHR-----DV 287
I L+D+ R ++ NP G S + APY R +
Sbjct: 206 WEICKCLVDDWQRGQGTVLYNPVVRTGTGAGAPAMGGASSYPQERAPYGGSSRVTRTGNG 265
Query: 288 ADIHLPMPPSIPKFHESGVLDRPKPS-----PEILTFRLLCHDERVGGVIGKGGAIIRSL 342
AD P + +S R P+ EI T + + VG +IG+ G+ I +
Sbjct: 266 ADFSNGGPRQYNRRSDSDAAQRGPPTHDENGEEIQTQNISIPADMVGCIIGRAGSKISEI 325
Query: 343 KQETGCDIKVMEA-VSGTEDRLIVISGPAHPDD 374
++ +G I + +A T +R+ I G A ++
Sbjct: 326 RKTSGARISIAKAPHDDTGERMFTIMGSAKANE 358
>gi|389630232|ref|XP_003712769.1| hypothetical protein MGG_16887 [Magnaporthe oryzae 70-15]
gi|351645101|gb|EHA52962.1| hypothetical protein MGG_16887 [Magnaporthe oryzae 70-15]
gi|440469705|gb|ELQ38806.1| Poly(rC)-binding protein 3 [Magnaporthe oryzae Y34]
gi|440482607|gb|ELQ63080.1| Poly(rC)-binding protein 3 [Magnaporthe oryzae P131]
Length = 370
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 83/362 (22%), Positives = 143/362 (39%), Gaps = 67/362 (18%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT R + + G +IGKGG + L+ ETG V + V G DR++ I+G
Sbjct: 46 LTVRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTITGGC------ 99
Query: 377 SAPQDAVLRVQTRIARAIPDNREQTVM-----------TRLLVASNQIGCLLGKGGSIIA 425
+ + + +ARA+ + M +LL++ NQ+G ++G+ G I
Sbjct: 100 ----EGISKAYAVVARALLEGAPSMGMGGVVSNNGTHPIKLLISHNQMGTIIGRQGLKIK 155
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPS 485
++ +SG + + K+ +P+ E VV + G E +Q A+++I L + R
Sbjct: 156 HIQDVSGVRM-VAQKEMLPQS---TERVVEVQGTPEGIQRAVWEICKCLIDDWQRGTGTV 211
Query: 486 INRPL---NPTFLDQVSPFPSFIGRRELSPPGMYSNF----GPSFHKFDAVGGPPPPGSF 538
+ P+ P Q+ + G S G YS+ + F GG S+
Sbjct: 212 LYNPVVRTQPAGATQMGSSGAGYG---TSNRGDYSSSRVTRTGNGADFSNGGGR----SY 264
Query: 539 HPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRS 598
+ D A G P H D G + + +P
Sbjct: 265 NRRSDSDAANR-----GPPTH----------------------DENGEEIQTQNISIPAD 297
Query: 599 LVPIIQGEDGACLKQIRQISDAKITITD-PKPGATETVIIISGTPEQTHAAQSLIQAFVM 657
+V I G G+ + +IR+ S A+I+I P E + I G+ + A L+ +
Sbjct: 298 MVGCIIGRAGSKISEIRKTSGARISIAKAPHDETGERMFTIMGSAKANETALFLLYENLE 357
Query: 658 SE 659
+E
Sbjct: 358 AE 359
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 95/213 (44%), Gaps = 27/213 (12%)
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQIDKLPTCAL---------ASDEVVQITGEVDTVRKAL 239
++LL+ Q+G ++G+ G IK I + + +++ VV++ G + +++A+
Sbjct: 134 IKLLISHNQMGTIIGRQGLKIKHIQDVSGVRMVAQKEMLPQSTERVVEVQGTPEGIQRAV 193
Query: 240 KLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHR------------DV 287
I L+D+ R ++ NP + P + S GA Y T +R +
Sbjct: 194 WEICKCLIDDWQRGTGTVLYNPVVRTQPAGATQMGSSGAGYGTSNRGDYSSSRVTRTGNG 253
Query: 288 ADIHLPMPPSIPKFHESGVLDRPKPS-----PEILTFRLLCHDERVGGVIGKGGAIIRSL 342
AD S + +S +R P+ EI T + + VG +IG+ G+ I +
Sbjct: 254 ADFSNGGGRSYNRRSDSDAANRGPPTHDENGEEIQTQNISIPADMVGCIIGRAGSKISEI 313
Query: 343 KQETGCDIKVMEA-VSGTEDRLIVISGPAHPDD 374
++ +G I + +A T +R+ I G A ++
Sbjct: 314 RKTSGARISIAKAPHDETGERMFTIMGSAKANE 346
>gi|350591798|ref|XP_003483335.1| PREDICTED: replication factor C (activator 1) 4, 37kDa [Sus scrofa]
Length = 578
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 142/343 (41%), Gaps = 55/343 (16%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV-MEAVSGTEDRLIVISGPAHPDDRIS 377
R+L + VG +IGK G I+++ ++T + + + SG ++ + I A P+
Sbjct: 175 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIH--ATPEGTSE 232
Query: 378 APQDAVLRV------QTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLS 431
A + +L + +T++A IP ++L + +G L+GK G + ++ +
Sbjct: 233 ACR-MILEIMQKEADETKLAEEIP--------LKILAHNGLVGRLIGKEGRNLKKIEHET 283
Query: 432 GAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLN 491
G I I + E + + G EA A +I +LR F D ++N+ N
Sbjct: 284 GTKITISSLQDL--SIYNPERTITVKGTVEACANAEIEIMKKLREAFENDML-AVNQQAN 340
Query: 492 PTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHI 551
I LS G++S G PP +HP HS + +
Sbjct: 341 ------------LIPGLNLSALGIFSTGLSVLPPPAGPRGAPPAPPYHPFATHSGYFSSL 388
Query: 552 HRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRR-VPVVVPRSLVPIIQGEDGAC 610
+ PPH +GP FP P + V + +P V I G+ GA
Sbjct: 389 Y----PPHQ-----FGP-----------FPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAH 428
Query: 611 LKQIRQISDAKITITDPK-PGATETVIIISGTPEQTHAAQSLI 652
+KQ+ + + A I I + P +E ++II+G PE AQ I
Sbjct: 429 IKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI 471
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 111/508 (21%), Positives = 197/508 (38%), Gaps = 140/508 (27%)
Query: 14 DDNHTEPNGKEKSQKLAGDYSENQPSKSFPGG--------IMFRVLCPVSKIDGVIGKDG 65
D+ + P+ +++Q+ GD+S + + PGG R+L P + +IGK+G
Sbjct: 136 DEEVSSPSPPQRAQR--GDHSSREQGHA-PGGSSQARQIDFPLRILVPTQFVGAIIGKEG 192
Query: 66 EMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASV 125
+ I++ T + I R EN+G E V
Sbjct: 193 LTIKNITKQTQSRV-------------------------------DIHRKENSGAAEKPV 221
Query: 126 ADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSS 185
+ EG+ +A ++ E M + ET++A++
Sbjct: 222 TIHA-------TPEGT---------------SEACRMILEIMQKEADETKLAEE------ 253
Query: 186 KFVLRLLVLSTQVGCLLGKGGCVIKQID-----KLPTCALAS------DEVVQITGEVDT 234
L++L + VG L+GK G +K+I+ K+ +L + + + G V+
Sbjct: 254 -IPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEA 312
Query: 235 VRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGA---------------- 278
A I +L + D ++ ++ +P ++S+ G
Sbjct: 313 CANAEIEIMKKLREAFENDMLAV----NQQANLIPGLNLSALGIFSTGLSVLPPPAGPRG 368
Query: 279 --------PYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGG 330
P+AT + ++ P H+ G PE L + VG
Sbjct: 369 APPAPPYHPFATHSGYFSSLYPP--------HQFGPFPHHHSYPEQEIVNLFIPTQAVGA 420
Query: 331 VIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRISAPQDAVLRVQTR 389
+IGK GA I+ L + G IK+ A +R+++I+GP +A + Q R
Sbjct: 421 IIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPP----------EAQFKAQGR 470
Query: 390 IARAIPD------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQI 443
I + + E + + V S+ G ++GKGG + E++ L+ A + I+ +DQ
Sbjct: 471 IFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQT 529
Query: 444 PKCASENEEVVL-INGEFEAVQEALFQI 470
P ENEEV++ I G F A Q A +I
Sbjct: 530 P---DENEEVIVRIIGHFFASQTAQRKI 554
>gi|224079280|ref|XP_002305814.1| predicted protein [Populus trichocarpa]
gi|222848778|gb|EEE86325.1| predicted protein [Populus trichocarpa]
Length = 270
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 61/96 (63%), Gaps = 8/96 (8%)
Query: 363 LIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGS 422
L V G +P S +A+L++Q + + + E+ ++TRLLV S+++GC+LG+G
Sbjct: 50 LQVFQGLWNPR---SQTIEAILQLQNKTS----EFSEKGMITRLLVPSSKVGCILGQGSQ 102
Query: 423 IIAEMRKLSGAYIRILGKDQIPKCASENEEVVLING 458
I EMR+L A IR+ K++ PKCASE+EE+V N
Sbjct: 103 DINEMRRLQ-AEIRVYPKNEKPKCASEDEELVQANN 137
>gi|301759723|ref|XP_002915742.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 1 [Ailuropoda melanoleuca]
Length = 599
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 142/343 (41%), Gaps = 55/343 (16%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV-MEAVSGTEDRLIVISGPAHPDDRIS 377
R+L + VG +IGK G I+++ ++T + + + SG ++ + I A P+
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIH--ATPEGTSE 253
Query: 378 APQDAVLRV------QTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLS 431
A + +L + +T++A IP ++L + +G L+GK G + ++ +
Sbjct: 254 ACR-MILEIMQKEADETKLAEEIP--------LKILAHNGLVGRLIGKEGRNLKKIEHET 304
Query: 432 GAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLN 491
G I I + E + + G EA A +I +LR F D ++N+ N
Sbjct: 305 GTKITISSLQDL--SIYNPERTITVKGTVEACANAEVEIMKKLREAFENDML-AVNQQAN 361
Query: 492 PTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHI 551
I LS G++S G PP +HP HS + +
Sbjct: 362 ------------LIPGLNLSALGIFSTGLSVLPPPAGPRGAPPAPPYHPFATHSGYFSSL 409
Query: 552 HRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRR-VPVVVPRSLVPIIQGEDGAC 610
+ PPH +GP FP P + V + +P V I G+ GA
Sbjct: 410 Y----PPHQ-----FGP-----------FPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAH 449
Query: 611 LKQIRQISDAKITITDPK-PGATETVIIISGTPEQTHAAQSLI 652
+KQ+ + + A I I + P +E ++II+G PE AQ I
Sbjct: 450 IKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI 492
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 111/508 (21%), Positives = 197/508 (38%), Gaps = 140/508 (27%)
Query: 14 DDNHTEPNGKEKSQKLAGDYSENQPSKSFPGG--------IMFRVLCPVSKIDGVIGKDG 65
D+ + P+ +++Q+ GD+S + + PGG R+L P + +IGK+G
Sbjct: 157 DEEVSSPSPPQRAQR--GDHSSREQGHA-PGGSSQARQIDFPLRILVPTQFVGAIIGKEG 213
Query: 66 EMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASV 125
+ I++ T + I R EN+G E V
Sbjct: 214 LTIKNITKQTQSRV-------------------------------DIHRKENSGAAEKPV 242
Query: 126 ADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSS 185
+ EG+ +A ++ E M + ET++A++
Sbjct: 243 TIHA-------TPEGT---------------SEACRMILEIMQKEADETKLAEE------ 274
Query: 186 KFVLRLLVLSTQVGCLLGKGGCVIKQID-----KLPTCALAS------DEVVQITGEVDT 234
L++L + VG L+GK G +K+I+ K+ +L + + + G V+
Sbjct: 275 -IPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEA 333
Query: 235 VRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGA---------------- 278
A I +L + D ++ ++ +P ++S+ G
Sbjct: 334 CANAEVEIMKKLREAFENDMLAV----NQQANLIPGLNLSALGIFSTGLSVLPPPAGPRG 389
Query: 279 --------PYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGG 330
P+AT + ++ P H+ G PE L + VG
Sbjct: 390 APPAPPYHPFATHSGYFSSLYPP--------HQFGPFPHHHSYPEQEIVNLFIPTQAVGA 441
Query: 331 VIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRISAPQDAVLRVQTR 389
+IGK GA I+ L + G IK+ A +R+++I+GP +A + Q R
Sbjct: 442 IIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPP----------EAQFKAQGR 491
Query: 390 IARAIPD------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQI 443
I + + E + + V S+ G ++GKGG + E++ L+ A + I+ +DQ
Sbjct: 492 IFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQT 550
Query: 444 PKCASENEEVVL-INGEFEAVQEALFQI 470
P ENEEV++ I G F A Q A +I
Sbjct: 551 P---DENEEVIVRIIGHFFASQTAQRKI 575
>gi|70989127|ref|XP_749413.1| KH domain RNA-binding protein [Aspergillus fumigatus Af293]
gi|66847044|gb|EAL87375.1| KH domain RNA-binding protein [Aspergillus fumigatus Af293]
gi|159128828|gb|EDP53942.1| KH domain RNA-binding protein [Aspergillus fumigatus A1163]
Length = 355
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/347 (22%), Positives = 139/347 (40%), Gaps = 41/347 (11%)
Query: 316 ILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDR 375
+LT R + + G +IGK G + L+ ETG V + V G DR++ ++GP R
Sbjct: 37 MLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTGPLQGTAR 96
Query: 376 ISA-PQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAY 434
A +L ++ N T RLL++ NQ+G ++G+ G I ++ SG
Sbjct: 97 AYALVAKGLLEGAPQMGMGGIVNNNGTHPVRLLISHNQMGTIIGRQGLKIKHIQDASGVR 156
Query: 435 IRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRP-LNPT 493
+ + K+ +P+ E +V + G E +++A+++I L + R + P + +
Sbjct: 157 M-VAQKEMLPQS---TERIVEVQGTPEGIEKAVWEIGKCLIDDWQRGTGTILYNPAVRAS 212
Query: 494 FLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHR 553
S S +G S P + G F + G + +
Sbjct: 213 VGGSTSMNTSSVGNGYSSRPYNRTGNGADFSDGQS-------GGYGRRSN---------- 255
Query: 554 PGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQ 613
PD G P+ D G + + +P +V I G G+ + +
Sbjct: 256 -------PDTSNRGY--------PLVTED--GEEIQTQNISIPADMVGCIIGRGGSKITE 298
Query: 614 IRQISDAKITITD-PKPGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
IR+ S A+I+I P E + I G+ + A L+ + +E
Sbjct: 299 IRRSSGARISIAKAPHDETGERMFTIMGSAQANEKALYLLYENLEAE 345
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 104/241 (43%), Gaps = 26/241 (10%)
Query: 158 KALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKLPT 217
+A LV + ++E P+ + N + V RLL+ Q+G ++G+ G IK I
Sbjct: 96 RAYALVAKGLLEGAPQMGMGGIVNNNGTHPV-RLLISHNQMGTIIGRQGLKIKHIQDASG 154
Query: 218 CAL---------ASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPT-----G 263
+ +++ +V++ G + + KA+ I L+D+ R +I NP G
Sbjct: 155 VRMVAQKEMLPQSTERIVEVQGTPEGIEKAVWEIGKCLIDDWQRGTGTILYNPAVRASVG 214
Query: 264 PSHPLPDHSVSS--QGAPYA-TGHRDVADIHLPMPPSIPKFHESGVLDRPKP-----SPE 315
S + SV + PY TG+ AD + +R P E
Sbjct: 215 GSTSMNTSSVGNGYSSRPYNRTGNG--ADFSDGQSGGYGRRSNPDTSNRGYPLVTEDGEE 272
Query: 316 ILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA-VSGTEDRLIVISGPAHPDD 374
I T + + VG +IG+GG+ I +++ +G I + +A T +R+ I G A ++
Sbjct: 273 IQTQNISIPADMVGCIIGRGGSKITEIRRSSGARISIAKAPHDETGERMFTIMGSAQANE 332
Query: 375 R 375
+
Sbjct: 333 K 333
>gi|113931242|ref|NP_001039068.1| poly(rC) binding protein 2 [Xenopus (Silurana) tropicalis]
gi|89273953|emb|CAJ81328.1| poly(rC) binding protein 3 [Xenopus (Silurana) tropicalis]
Length = 362
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 109/276 (39%), Gaps = 67/276 (24%)
Query: 402 VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFE 461
V RL+V ++Q G L+GKGGS I E+R+ +GA +++ G D +P + E V I+G +
Sbjct: 12 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAG-DMLP---NSTERAVTISGTPD 67
Query: 462 AVQEALFQITTRLRHHFFRDA-FPSINRPL---------------------NPTFLDQVS 499
A+ + + QI + + A P +P N T L Q
Sbjct: 68 AIIQCVKQICVVMLESPPKGATIPYRPKPASGPIIFAGGQVRAETILASAGNHTVLAQPQ 127
Query: 500 PFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPH 559
P P+F + G Y+ P K H M H
Sbjct: 128 PAPAFAIQ------GQYAIPHPDLTKL-----------------HQLAMQH--------- 155
Query: 560 MPDMKPWGPQGLMEVGGPMGFPDF-VGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQIS 618
P+ P G GFP P + +P L+ I G G+ + +IRQ+S
Sbjct: 156 ----TPFTPLGQTTP----GFPGLDATSPTSSHELTIPNDLIGCIIGRQGSKINEIRQMS 207
Query: 619 DAKITITDPKPGATETVIIISGTPEQTHAAQSLIQA 654
A+I I + G E + I+G+P AQ LI A
Sbjct: 208 GAQIKIANASEGNGERQVTITGSPANISLAQYLINA 243
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 100/228 (43%), Gaps = 56/228 (24%)
Query: 187 FVLRLLVLSTQVGCLLGKGGCVIKQI------------DKLPTCALASDEVVQITGEVDT 234
LRL+V ++Q G L+GKGG IK+I D LP +++ V I+G D
Sbjct: 12 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPN---STERAVTISGTPDA 68
Query: 235 VRKALKLISHQLLDNSPRDHESIPGNPTGPSHPL----------------PDHSVSSQGA 278
+ + +K I +L++ P+ +IP P S P+ +H+V +Q
Sbjct: 69 IIQCVKQICVVMLESPPKG-ATIPYRPKPASGPIIFAGGQVRAETILASAGNHTVLAQPQ 127
Query: 279 P---------YATGHRDVADIH---------LPMPPSIPKFHESGVLDRPKPSPEILTFR 320
P YA H D+ +H P+ + P F LD P+ +
Sbjct: 128 PAPAFAIQGQYAIPHPDLTKLHQLAMQHTPFTPLGQTTPGFPG---LDATSPTS---SHE 181
Query: 321 LLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
L ++ +G +IG+ G+ I ++Q +G IK+ A G +R + I+G
Sbjct: 182 LTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANASEGNGERQVTITG 229
>gi|281354032|gb|EFB29616.1| hypothetical protein PANDA_003725 [Ailuropoda melanoleuca]
Length = 434
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 142/343 (41%), Gaps = 55/343 (16%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV-MEAVSGTEDRLIVISGPAHPDDRIS 377
R+L + VG +IGK G I+++ ++T + + + SG ++ + I A P+
Sbjct: 61 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIH--ATPEGTSE 118
Query: 378 APQDAVLRV------QTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLS 431
A + +L + +T++A IP ++L + +G L+GK G + ++ +
Sbjct: 119 ACR-MILEIMQKEADETKLAEEIP--------LKILAHNGLVGRLIGKEGRNLKKIEHET 169
Query: 432 GAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLN 491
G I I + E + + G EA A +I +LR F D ++N+ N
Sbjct: 170 GTKITISSLQDL--SIYNPERTITVKGTVEACANAEVEIMKKLREAFENDML-AVNQQAN 226
Query: 492 PTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHI 551
I LS G++S G PP +HP HS + +
Sbjct: 227 ------------LIPGLNLSALGIFSTGLSVLPPPAGPRGAPPAPPYHPFATHSGYFSSL 274
Query: 552 HRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRR-VPVVVPRSLVPIIQGEDGAC 610
+ PPH +GP FP P + V + +P V I G+ GA
Sbjct: 275 Y----PPHQ-----FGP-----------FPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAH 314
Query: 611 LKQIRQISDAKITITDPK-PGATETVIIISGTPEQTHAAQSLI 652
+KQ+ + + A I I + P +E ++II+G PE AQ I
Sbjct: 315 IKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI 357
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 109/502 (21%), Positives = 194/502 (38%), Gaps = 140/502 (27%)
Query: 14 DDNHTEPNGKEKSQKLAGDYSENQPSKSFPGG--------IMFRVLCPVSKIDGVIGKDG 65
D+ + P+ +++Q+ GD+S + + PGG R+L P + +IGK+G
Sbjct: 22 DEEVSSPSPPQRAQR--GDHSSREQGHA-PGGSSQARQIDFPLRILVPTQFVGAIIGKEG 78
Query: 66 EMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASV 125
+ I++ T + I R EN+G E V
Sbjct: 79 LTIKNITKQTQSRV-------------------------------DIHRKENSGAAEKPV 107
Query: 126 ADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSS 185
+ EG+ +A ++ E M + ET++A++
Sbjct: 108 TIHA-------TPEGT---------------SEACRMILEIMQKEADETKLAEE------ 139
Query: 186 KFVLRLLVLSTQVGCLLGKGGCVIKQID-----KLPTCALAS------DEVVQITGEVDT 234
L++L + VG L+GK G +K+I+ K+ +L + + + G V+
Sbjct: 140 -IPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEA 198
Query: 235 VRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGA---------------- 278
A I +L + D ++ ++ +P ++S+ G
Sbjct: 199 CANAEVEIMKKLREAFENDMLAV----NQQANLIPGLNLSALGIFSTGLSVLPPPAGPRG 254
Query: 279 --------PYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGG 330
P+AT + ++ P H+ G PE L + VG
Sbjct: 255 APPAPPYHPFATHSGYFSSLYPP--------HQFGPFPHHHSYPEQEIVNLFIPTQAVGA 306
Query: 331 VIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRISAPQDAVLRVQTR 389
+IGK GA I+ L + G IK+ A +R+++I+GP +A + Q R
Sbjct: 307 IIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPP----------EAQFKAQGR 356
Query: 390 IARAIPD------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQI 443
I + + E + + V S+ G ++GKGG + E++ L+ A + I+ +DQ
Sbjct: 357 IFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQT 415
Query: 444 PKCASENEEVVL-INGEFEAVQ 464
P ENEEV++ I G F A Q
Sbjct: 416 P---DENEEVIVRIIGHFFASQ 434
>gi|119498177|ref|XP_001265846.1| KH domain RNA-binding protein [Neosartorya fischeri NRRL 181]
gi|119414010|gb|EAW23949.1| KH domain RNA-binding protein [Neosartorya fischeri NRRL 181]
Length = 360
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/347 (22%), Positives = 139/347 (40%), Gaps = 41/347 (11%)
Query: 316 ILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDR 375
+LT R + + G +IGK G + L+ ETG V + V G DR++ ++GP R
Sbjct: 42 MLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTGPLQGTAR 101
Query: 376 ISA-PQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAY 434
A +L ++ N T RLL++ NQ+G ++G+ G I ++ SG
Sbjct: 102 AYALVAKGLLEGAPQMGMGGIVNNNGTHPVRLLISHNQMGTIIGRQGLKIKHIQDASGVR 161
Query: 435 IRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRP-LNPT 493
+ + K+ +P+ E +V + G E +++A+++I L + R + P + +
Sbjct: 162 M-VAQKEMLPQST---ERIVEVQGTPEGIEKAVWEIGKCLIDDWQRGTGTILYNPAVRAS 217
Query: 494 FLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHR 553
S S +G S P + G F + G + +
Sbjct: 218 VGGSTSMNTSSVGNGYNSRPYNRTGNGADFSDGQS-------GGYGRRSN---------- 260
Query: 554 PGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQ 613
PD G P+ D G + + +P +V I G G+ + +
Sbjct: 261 -------PDTSNRGY--------PLVTED--GEEIQTQNISIPADMVGCIIGRGGSKITE 303
Query: 614 IRQISDAKITITD-PKPGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
IR+ S A+I+I P E + I G+ + A L+ + +E
Sbjct: 304 IRRSSGARISIAKAPHDETGERMFTIMGSAQANEKALYLLYENLEAE 350
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 104/241 (43%), Gaps = 26/241 (10%)
Query: 158 KALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKLPT 217
+A LV + ++E P+ + N + V RLL+ Q+G ++G+ G IK I
Sbjct: 101 RAYALVAKGLLEGAPQMGMGGIVNNNGTHPV-RLLISHNQMGTIIGRQGLKIKHIQDASG 159
Query: 218 CAL---------ASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPT-----G 263
+ +++ +V++ G + + KA+ I L+D+ R +I NP G
Sbjct: 160 VRMVAQKEMLPQSTERIVEVQGTPEGIEKAVWEIGKCLIDDWQRGTGTILYNPAVRASVG 219
Query: 264 PSHPLPDHSVSS--QGAPYA-TGHRDVADIHLPMPPSIPKFHESGVLDRPKP-----SPE 315
S + SV + PY TG+ AD + +R P E
Sbjct: 220 GSTSMNTSSVGNGYNSRPYNRTGNG--ADFSDGQSGGYGRRSNPDTSNRGYPLVTEDGEE 277
Query: 316 ILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA-VSGTEDRLIVISGPAHPDD 374
I T + + VG +IG+GG+ I +++ +G I + +A T +R+ I G A ++
Sbjct: 278 IQTQNISIPADMVGCIIGRGGSKITEIRRSSGARISIAKAPHDETGERMFTIMGSAQANE 337
Query: 375 R 375
+
Sbjct: 338 K 338
>gi|448081636|ref|XP_004194937.1| Piso0_005464 [Millerozyma farinosa CBS 7064]
gi|359376359|emb|CCE86941.1| Piso0_005464 [Millerozyma farinosa CBS 7064]
Length = 362
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 39/207 (18%)
Query: 178 DQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKLPTCAL---------ASDEVVQI 228
D+E T +LRLL+ + Q+G L+G G I+QI + ++ +++ +V++
Sbjct: 167 DEETT-----ILRLLIPNAQMGTLIGSKGIRIQQIQSMYNISMIASKAFLQGSNERLVEL 221
Query: 229 TGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVA 288
G VD + AL++IS L++ D SI G ++ +P S ++ G
Sbjct: 222 QGTVDNLYDALRVISRCLIE----DFSSI----VGTNYYVPKGSSANNG----------- 262
Query: 289 DIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGC 348
+L P S S LTF ++ VG +IGK G+ I+ +++ +G
Sbjct: 263 --NLNGPTRRDSSGSSRRYGNLSVSTTTLTF----PNDVVGALIGKNGSRIQGVRKISGA 316
Query: 349 DIKVMEAVSGTEDRLIVISGPAHPDDR 375
I + V DR+ I+GP+H ++
Sbjct: 317 TITISNEVENQSDRVFTITGPSHAIEK 343
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 67/350 (19%), Positives = 132/350 (37%), Gaps = 87/350 (24%)
Query: 316 ILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDR 375
++ +R+L + G +IG+ GA+I S++ ET + + G+ +R++ +SG +
Sbjct: 73 LINYRVLVSAKESGCLIGQNGAVIDSIRAETNTKAGISKLQPGSHERILTVSGTLDNSAK 132
Query: 376 ISAPQDAVLRVQTRIARAIPDNR-------------EQTVMTRLLVASNQIGCLLGKGGS 422
+ A R+A + N E+T + RLL+ + Q+G L+G G
Sbjct: 133 -ALSYFAQALCNARVANTLNYNYFPLKQLSPVPCIDEETTILRLLIPNAQMGTLIGSKGI 191
Query: 423 IIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDA 482
I +++ + I ++ + NE +V E + + L+ DA
Sbjct: 192 RIQQIQSMYN--ISMIASKAFLQ--GSNERLV----ELQGTVDNLY------------DA 231
Query: 483 FPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHD 542
I+R L + F S +G P G +N G
Sbjct: 232 LRVISRCL-------IEDFSSIVGTNYYVPKGSSANNG---------------------- 262
Query: 543 DHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPI 602
+++ P + +G + + P +V
Sbjct: 263 -------NLNGPTRRDSSGSSRRYGNLSV-----------------STTTLTFPNDVVGA 298
Query: 603 IQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLI 652
+ G++G+ ++ +R+IS A ITI++ ++ V I+G A+SL+
Sbjct: 299 LIGKNGSRIQGVRKISGATITISNEVENQSDRVFTITGPSHAIEKAKSLL 348
>gi|390474894|ref|XP_002758191.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 3 [Callithrix jacchus]
Length = 1052
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 111/501 (22%), Positives = 198/501 (39%), Gaps = 126/501 (25%)
Query: 14 DDNHTEPNGKEKSQKLAGDYSENQPSKSFPGG--------IMFRVLCPVSKIDGVIGKDG 65
D+ + P+ +++Q+ GD+S + + PGG R+L P + +IGK+G
Sbjct: 610 DEEVSSPSPPQRAQR--GDHSSREQGHA-PGGSSQARQIDFPLRILVPTQFVGAIIGKEG 666
Query: 66 EMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASV 125
+ I++ T + I R EN+G E V
Sbjct: 667 LTIKNITKQTQSRV-------------------------------DIHRKENSGAAEKPV 695
Query: 126 ADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSS 185
+ EG+ +A ++ E M + ET++A++
Sbjct: 696 TIHA-------TPEGT---------------SEACRMILEIMQKEADETKLAEE------ 727
Query: 186 KFVLRLLVLSTQVGCLLGKGGCVIKQID-----KLPTCALAS------DEVVQITGEVDT 234
L++L + VG L+GK G +K+I+ K+ +L + + + G V+
Sbjct: 728 -IPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEA 786
Query: 235 VRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVAD----- 289
A I +L + D ++ ++ +P ++S+ G ++TG ++
Sbjct: 787 CACAEIEIMKKLREAFENDMLAV----NQQANLIPGLNLSALGI-FSTGLSVLSPPAGPR 841
Query: 290 ------------IHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGA 337
H S+ H+ G PE L + VG +IGK GA
Sbjct: 842 GAPPAAPYHPFATHSGYFSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGA 901
Query: 338 IIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPD 396
I+ L + G IK+ A +R+++I+GP +A + Q RI + +
Sbjct: 902 HIKQLARFAGASIKIAPAEGPDVSERMVIITGPP----------EAQFKAQGRIFGKLKE 951
Query: 397 ------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASEN 450
E + + V S+ G ++GKGG + E++ L+ A + I+ +DQ P EN
Sbjct: 952 ENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP---DEN 1007
Query: 451 EEVVL-INGEFEAVQEALFQI 470
EEV++ I G F A Q A +I
Sbjct: 1008 EEVIVRIIGHFFASQTAQRKI 1028
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 141/343 (41%), Gaps = 55/343 (16%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV-MEAVSGTEDRLIVISGPAHPDDRIS 377
R+L + VG +IGK G I+++ ++T + + + SG ++ + I A P+
Sbjct: 649 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIH--ATPEGTSE 706
Query: 378 APQDAVLRV------QTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLS 431
A + +L + +T++A IP ++L + +G L+GK G + ++ +
Sbjct: 707 ACR-MILEIMQKEADETKLAEEIP--------LKILAHNGLVGRLIGKEGRNLKKIEHET 757
Query: 432 GAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLN 491
G I I + E + + G EA A +I +LR F D ++N+ N
Sbjct: 758 GTKITISSLQDL--SIYNPERTITVKGTVEACACAEIEIMKKLREAFENDML-AVNQQAN 814
Query: 492 PTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHI 551
I LS G++S G PP +HP HS + +
Sbjct: 815 ------------LIPGLNLSALGIFSTGLSVLSPPAGPRGAPPAAPYHPFATHSGYFSSL 862
Query: 552 HRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRR-VPVVVPRSLVPIIQGEDGAC 610
+ P H +GP FP P + V + +P V I G+ GA
Sbjct: 863 Y----PHHQ-----FGP-----------FPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAH 902
Query: 611 LKQIRQISDAKITITDPK-PGATETVIIISGTPEQTHAAQSLI 652
+KQ+ + + A I I + P +E ++II+G PE AQ I
Sbjct: 903 IKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI 945
>gi|198465289|ref|XP_001353580.2| GA20351 [Drosophila pseudoobscura pseudoobscura]
gi|198150092|gb|EAL31093.2| GA20351 [Drosophila pseudoobscura pseudoobscura]
Length = 330
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 99/219 (45%), Gaps = 53/219 (24%)
Query: 300 KFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVM-EAVSG 358
+F+++G + + + + RL+ + G +IGK G+ I+ ++Q TGC I+V E +
Sbjct: 95 QFNDAGKIGKTQ-----IPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPN 149
Query: 359 TEDRLIVISGPAHPDDRI----------SAPQDAVLR----------------------- 385
+ +R + +SG A + S P+ V +
Sbjct: 150 STERAVTLSGSAEQITQCIYQICLVMLESCPRSTVAKNPLASLAALGLAGMNPASTGGIN 209
Query: 386 ----------VQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYI 435
Q R A A NR Q + V+++ IGC++GKGG+ IAE+R++SGA I
Sbjct: 210 HTAALAALAGSQLRTANA--ANRAQQQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMI 267
Query: 436 RILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRL 474
RI ++ + + + I+G ++V A + I R+
Sbjct: 268 RISNCEE--REGGNTDRTITISGNPDSVALAQYLINMRI 304
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 79/164 (48%), Gaps = 26/164 (15%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RL+ + VG +IGK G I+ ++E+G I + + +R++ +SG
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDG--SCPERIVTVSGTT------ 75
Query: 377 SAPQDAVLRVQTRIARAIPDNREQ----------TVMTRLLVASNQIGCLLGKGGSIIAE 426
+A+ T I + + Q + RL+V ++Q G L+GK GS I E
Sbjct: 76 ----NAIFSAFTLITKKFEEWCSQFNDAGKIGKTQIPIRLIVPASQCGSLIGKSGSKIKE 131
Query: 427 MRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
+R+ +G I++ + +P + E V ++G E + + ++QI
Sbjct: 132 IRQTTGCSIQV-ASEMLP---NSTERAVTLSGSAEQITQCIYQI 171
Score = 38.9 bits (89), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 593 VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKP---GATETVIIISGTPEQTHAAQ 649
+ V L+ I G+ G + +IRQIS A I I++ + G T+ I ISG P+ AQ
Sbjct: 238 MTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQ 297
Query: 650 SLIQAFVMSET 660
LI + ET
Sbjct: 298 YLINMRISMET 308
>gi|302654659|ref|XP_003019130.1| hypothetical protein TRV_06814 [Trichophyton verrucosum HKI 0517]
gi|291182834|gb|EFE38485.1| hypothetical protein TRV_06814 [Trichophyton verrucosum HKI 0517]
Length = 379
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 87/177 (49%), Gaps = 9/177 (5%)
Query: 316 ILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDR 375
+LT R + + G +IGK G + L+ ETG V + V G DR++ ++GP +
Sbjct: 59 MLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGPLQGTSK 118
Query: 376 -ISAPQDAVLRV--QTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSG 432
S ++L Q + + +N +V RLL++ NQ+G ++G+ G I ++ SG
Sbjct: 119 AYSIVAKSLLEGAPQMGMGGVVQNNGTHSV--RLLISHNQMGTIIGRQGLKIKYIQDASG 176
Query: 433 AYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRP 489
+ + K+ +P+ E +V + G E +++A+++I L + R + P
Sbjct: 177 VRM-VAQKEMLPQS---TERIVEVQGTPEGIEKAIWEIGKCLIDDWQRGTGTVLYNP 229
Score = 45.4 bits (106), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 103/248 (41%), Gaps = 38/248 (15%)
Query: 158 KALLLVFERMVEVEPETEVAD--QENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKL 215
KA +V + ++E P+ + Q N S +RLL+ Q+G ++G+ G IK I
Sbjct: 118 KAYSIVAKSLLEGAPQMGMGGVVQNNGTHS---VRLLISHNQMGTIIGRQGLKIKYIQDA 174
Query: 216 PTCAL---------ASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSH 266
+ +++ +V++ G + + KA+ I L+D+ R ++ NP +
Sbjct: 175 SGVRMVAQKEMLPQSTERIVEVQGTPEGIEKAIWEIGKCLIDDWQRGTGTVLYNPAVRAS 234
Query: 267 PLPDHSVSSQGAPYATG----------HRDVADIHLPMPPSIPKFHESGVLDRP------ 310
S S QGA T +R PS + G D P
Sbjct: 235 V---GSGSGQGAVTGTNSSYGGSSRSYNRTGNGADFSDHPS--SYSRRGNNDNPNRGIPL 289
Query: 311 --KPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA-VSGTEDRLIVIS 367
+ E+ T + + VG +IG+GG I +++ +G I + +A T +R+ I
Sbjct: 290 VTEDGEEVQTQNISIPSDMVGCIIGRGGTKISEIRRSSGARISIAKAPHDDTGERMFTIM 349
Query: 368 GPAHPDDR 375
G A +++
Sbjct: 350 GSAQANEK 357
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 7/92 (7%)
Query: 392 RAIP---DNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCAS 448
R IP ++ E+ + + S+ +GC++G+GG+ I+E+R+ SGA I I + P +
Sbjct: 285 RGIPLVTEDGEEVQTQNISIPSDMVGCIIGRGGTKISEIRRSSGARISIA---KAPHDDT 341
Query: 449 ENEEVVLINGEFEAVQEALFQITTRLRHHFFR 480
E + I G +A ++AL+ + L R
Sbjct: 342 -GERMFTIMGSAQANEKALYLLYENLEAEKMR 372
>gi|255943089|ref|XP_002562313.1| Pc18g04820 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211587046|emb|CAP94706.1| Pc18g04820 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 366
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/360 (20%), Positives = 137/360 (38%), Gaps = 67/360 (18%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT R + + G +IGK G + L+ ETG V + V G DR++ ++G
Sbjct: 47 LTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTGQLR----- 101
Query: 377 SAPQDAVLRVQTRIARAIPDNREQTVM-----------TRLLVASNQIGCLLGKGGSIIA 425
++ R +A+ + + Q M RLL++ NQ+G ++G+ G I
Sbjct: 102 -----SLARAYAIVAKGLLEGAPQMGMGGIVSNNGTHPVRLLISHNQMGTIIGRQGLKIK 156
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPS 485
++ SG + + K+ +P+ E +V + G E +++A+++I L + R
Sbjct: 157 HIQDASGVRM-VAQKEMLPQST---ERIVEVQGTPEGIEKAIWEIGKCLLDDWQRGTGTV 212
Query: 486 INRPLNPTFLDQVSPFPSFIGRRELSPP---GMYSNFGPSFHKFDAVGGPPPPGSFHPHD 542
+ P L P + +PP G +N + G G ++
Sbjct: 213 LYNPAVRASLSGSQPLNN-------NPPAGNGYQNNTSSRQYNRTGNGADFSDGGYNRRS 265
Query: 543 DHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFV--GPPHRRVPVVVPRSLV 600
+ A G G+P G + + +P +V
Sbjct: 266 NSDA-----------------------------GNRGYPLVTEDGEEIQTQNISIPADMV 296
Query: 601 PIIQGEDGACLKQIRQISDAKITITD-PKPGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
I G G + +IR+ S A+I+I P E + I G+ + A L+ + +E
Sbjct: 297 GCIIGRGGTKITEIRRSSGARISIAKAPHDETGERMFTIMGSAQANEKALYLLYENLEAE 356
>gi|389585810|dbj|GAB68540.1| RNA-binding protein Nova-1, partial [Plasmodium cynomolgi strain B]
Length = 278
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 105/212 (49%), Gaps = 32/212 (15%)
Query: 311 KPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS---GTEDRLIVIS 367
K + ++ ++L ++ G VIGK G+II S++ +TGC +K+ S T++R++V+
Sbjct: 12 KGTSQLCFVKMLVNNLVAGSVIGKNGSIITSIENKTGCSLKLSPTNSYFPNTQERVLVLC 71
Query: 368 GPAHPDDRISAPQDAVLRVQTRIARAIPDNRE--QTVMT------RLLVASNQIGCLLGK 419
G + +A+L + +I + N + Q + T R++V + + ++GK
Sbjct: 72 GKQEQIN------NALLIILDKIRQITTQNFQDKQNINTAPKYTCRIVVPKSAVSAIIGK 125
Query: 420 GGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFF 479
GG I +++ +GA I+I ++ NE ++ I G FE++ + ++T +++
Sbjct: 126 GGQQIKQLQDSTGAKIQISSRED-----GLNERIISIIGPFESISDTAIKVTNSIQND-- 178
Query: 480 RDAFPSINRPLNPTFLDQVSPFPSFIGRRELS 511
P++ LN + S S GR LS
Sbjct: 179 ----PNLKDLLNVIY----SKDTSMNGRSSLS 202
>gi|449304748|gb|EMD00755.1| hypothetical protein BAUCODRAFT_60994 [Baudoinia compniacensis UAMH
10762]
Length = 333
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 142/351 (40%), Gaps = 55/351 (15%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
+T R + + G +IGK G + L+ +TG V + V G DR++ ++GP +
Sbjct: 18 ITLRAIVTSKEAGVIIGKAGQNVAELRDKTGVRAGVSKVVPGVHDRVLTVTGP------L 71
Query: 377 SAPQDAVLRVQTRIARAIPDNREQTVMT-------RLLVASNQIGCLLGKGGSIIAEMRK 429
+ +A V + + P V+ RLL++ NQ+G ++G+ G I +++
Sbjct: 72 TGISEAYGLVADGLVKGAPQMGMGGVVANPNTHPIRLLISHNQMGTIIGRQGLKIKQIQD 131
Query: 430 LSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRP 489
SG + + K+ +P+ E +V I G + VQ+A+++I L R + P
Sbjct: 132 ASGVRM-VAQKEMLPQS---TERIVEIQGTPDGVQKAVWEIGKCLIDDQERGYGTVLYSP 187
Query: 490 LNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMH 549
+ +P P+ G +P G Y+ G + F G P S P D
Sbjct: 188 --AVRVQGAAPTPAMNGTGYGAPRG-YNRTG-NGADFTGSGAPYQRRSTGPSDT------ 237
Query: 550 HIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGA 609
G PP + D G + + +P +V I G G+
Sbjct: 238 -----GPPPAVED----------------------GEDIQTQNISIPADMVGCIIGRGGS 270
Query: 610 CLKQIRQISDAKITITD-PKPGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
+ +IR+ S A+I+I P E + I+G A L+ + +E
Sbjct: 271 KISEIRKSSGARISIAKAPHDDTGERMFTITGGQTANEKALYLLYENLEAE 321
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 96/206 (46%), Gaps = 21/206 (10%)
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQIDKLPTCAL---------ASDEVVQITGEVDTVRKAL 239
+RLL+ Q+G ++G+ G IKQI + +++ +V+I G D V+KA+
Sbjct: 106 IRLLISHNQMGTIIGRQGLKIKQIQDASGVRMVAQKEMLPQSTERIVEIQGTPDGVQKAV 165
Query: 240 KLISHQLLDNSPRDHESIPGNPT---GPSHPLPDHSVSSQGAPYATGHR-DVADIHLPMP 295
I L+D+ R + ++ +P + P P + + GAP + AD
Sbjct: 166 WEIGKCLIDDQERGYGTVLYSPAVRVQGAAPTPAMNGTGYGAPRGYNRTGNGADFTGSGA 225
Query: 296 PSIPKFHESGVLDR-PKPSPE----ILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDI 350
P + +G D P P+ E I T + + VG +IG+GG+ I +++ +G I
Sbjct: 226 PY--QRRSTGPSDTGPPPAVEDGEDIQTQNISIPADMVGCIIGRGGSKISEIRKSSGARI 283
Query: 351 KVMEA-VSGTEDRLIVISGPAHPDDR 375
+ +A T +R+ I+G +++
Sbjct: 284 SIAKAPHDDTGERMFTITGGQTANEK 309
>gi|326470883|gb|EGD94892.1| KH domain RNA-binding protein [Trichophyton tonsurans CBS 112818]
gi|326478447|gb|EGE02457.1| KH domain RNA-binding protein [Trichophyton equinum CBS 127.97]
Length = 367
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 87/177 (49%), Gaps = 9/177 (5%)
Query: 316 ILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDR 375
+LT R + + G +IGK G + L+ ETG V + V G DR++ ++GP +
Sbjct: 47 MLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGPLQGTSK 106
Query: 376 -ISAPQDAVLRV--QTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSG 432
S ++L Q + + +N +V RLL++ NQ+G ++G+ G I ++ SG
Sbjct: 107 AYSIVAKSLLEGAPQMGMGGVVQNNGTHSV--RLLISHNQMGTIIGRQGLKIKYIQDASG 164
Query: 433 AYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRP 489
+ + K+ +P+ E +V + G E +++A+++I L + R + P
Sbjct: 165 VRM-VAQKEMLPQST---ERIVEVQGTPEGIEKAIWEIGKCLIDDWQRGTGTVLYNP 217
Score = 46.2 bits (108), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 101/245 (41%), Gaps = 32/245 (13%)
Query: 158 KALLLVFERMVEVEPETEVAD--QENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKL 215
KA +V + ++E P+ + Q N S +RLL+ Q+G ++G+ G IK I
Sbjct: 106 KAYSIVAKSLLEGAPQMGMGGVVQNNGTHS---VRLLISHNQMGTIIGRQGLKIKYIQDA 162
Query: 216 PTCAL---------ASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPT---- 262
+ +++ +V++ G + + KA+ I L+D+ R ++ NP
Sbjct: 163 SGVRMVAQKEMLPQSTERIVEVQGTPEGIEKAIWEIGKCLIDDWQRGTGTVLYNPAVRAS 222
Query: 263 ---GPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRP--------K 311
+ +S G + +R PS + G D P +
Sbjct: 223 VGSSSGQGSVTGTATSYGGSSRSYNRTGNGADFSDHPS--SYSRRGNNDNPNRGIPLVTE 280
Query: 312 PSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA-VSGTEDRLIVISGPA 370
E+ T + + VG +IG+GG I +++ +G I + +A T +R+ I G A
Sbjct: 281 DGEEVQTQNISIPSDMVGCIIGRGGTKISEIRRSSGARISIAKAPHDDTGERMFTIMGSA 340
Query: 371 HPDDR 375
+++
Sbjct: 341 QANEK 345
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 7/92 (7%)
Query: 392 RAIP---DNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCAS 448
R IP ++ E+ + + S+ +GC++G+GG+ I+E+R+ SGA I I + P +
Sbjct: 273 RGIPLVTEDGEEVQTQNISIPSDMVGCIIGRGGTKISEIRRSSGARISIA---KAPHDDT 329
Query: 449 ENEEVVLINGEFEAVQEALFQITTRLRHHFFR 480
E + I G +A ++AL+ + L R
Sbjct: 330 -GERMFTIMGSAQANEKALYLLYENLEAEKMR 360
>gi|348519759|ref|XP_003447397.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 2 [Oreochromis niloticus]
Length = 581
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 142/303 (46%), Gaps = 50/303 (16%)
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQID-----KLPTCALAS------DEVVQITGEVDTVRK 237
L++L ++ VG L+GK G +K+I+ K+ +L + + + G +D K
Sbjct: 282 LKILAHNSLVGRLIGKEGRNLKKIEEDTGTKITISSLQDLTIYNPERTITVKGSIDACCK 341
Query: 238 ALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLP-MPP 296
A I+ +L + D +I ++ +P ++++ G +++G LP +PP
Sbjct: 342 AEVEITKKLREAYENDIAAI----NQQANLIPGLNLNALGI-FSSG--------LPVLPP 388
Query: 297 SI-PKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA 355
+ P+ V P+ +PE L + VG +IGK G I+ L G IK+ A
Sbjct: 389 AAGPRSAVPAVA--PQQAPEQEVVYLFIPTQAVGALIGKKGQHIKQLAHFAGASIKIAPA 446
Query: 356 VS-GTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPD------NREQTVMTRLLV 408
S +R+++I+G +A + Q RI + + E + T + V
Sbjct: 447 ESPDVTERMVIITGTP----------EAQFKAQGRIFGKLKEENFFSAKEEVKLETHIKV 496
Query: 409 ASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEV-VLINGEFEAVQEAL 467
S+ G ++GKGG + E++ L+ A + I+ +DQ P EN+EV V I+G F A Q A
Sbjct: 497 PSSAAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENDEVFVKISGHFFASQTAQ 552
Query: 468 FQI 470
+I
Sbjct: 553 RKI 555
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 79/352 (22%), Positives = 132/352 (37%), Gaps = 68/352 (19%)
Query: 304 SGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQET--GCDIKVMEAVSGTED 361
SG P+P R+L + VG +IGK G I+ + ++T DI E E
Sbjct: 186 SGGYGSPRPRQHDFPLRMLVPTQFVGAIIGKEGNTIKDVTKQTQSKVDIHRKENAGAAEK 245
Query: 362 RLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGG 421
+ + S P + SA +L + + A + + ++L ++ +G L+GK G
Sbjct: 246 PITIHSTP----EGCSAACRMILDIMQKEANETKTTED--IPLKILAHNSLVGRLIGKEG 299
Query: 422 SIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRD 481
+ ++ + +G I I + E + + G +A +A +IT +LR + D
Sbjct: 300 RNLKKIEEDTGTKITISSLQDL--TIYNPERTITVKGSIDACCKAEVEITKKLREAYEND 357
Query: 482 AFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPH 541
+IN+ N I L+ G++S+ P PP G
Sbjct: 358 -IAAINQQAN------------LIPGLNLNALGIFSSGLPVL--------PPAAGP---- 392
Query: 542 DDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVP 601
R +P P P V + +P V
Sbjct: 393 -----------RSAVPAVAPQQ---------------------APEQEVVYLFIPTQAVG 420
Query: 602 IIQGEDGACLKQIRQISDAKITITDPK-PGATETVIIISGTPEQTHAAQSLI 652
+ G+ G +KQ+ + A I I + P TE ++II+GTPE AQ I
Sbjct: 421 ALIGKKGQHIKQLAHFAGASIKIAPAESPDVTERMVIITGTPEAQFKAQGRI 472
>gi|358252903|dbj|GAA50475.1| poly(rC)-binding protein 2/3/4 [Clonorchis sinensis]
Length = 859
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 82/158 (51%), Gaps = 20/158 (12%)
Query: 310 PKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGP 369
P P +L RLL + VG +IGK G ++ ++E+G I + + S +R++ I+G
Sbjct: 193 PNPQTFVLIVRLLMSGKEVGSIIGKRGENVKKYREESGARINISDGSS--PERIVTITGT 250
Query: 370 AHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRK 429
++IS T +++ D+ Q LL + Q G ++GKGGS I E+R+
Sbjct: 251 T---EQISV-------AFTLMSQKFEDDFTQ----GLLRMATQCGSIIGKGGSRIKEVRE 296
Query: 430 LSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEAL 467
L+GA I++ + +P + E V I+G +A+ + +
Sbjct: 297 LTGASIQV-ASEALP---ASTERTVTISGAAKAISKCV 330
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 60/124 (48%), Gaps = 5/124 (4%)
Query: 360 EDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGK 419
+++ ++ PA P Q+A + + AI E+ V L++++ IGC++G+
Sbjct: 631 QNKASLLGLPAFPLPFYVGSQNAAFPLSANLTPAITTTTEEPVTRELIISNELIGCIIGR 690
Query: 420 GGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFF 479
GG+ + E+R +S A I+I + K E + ++G +AV A F I + H
Sbjct: 691 GGTTVNEIRNISKAQIKISNCEDGAK-----ERKITLSGPMQAVNLAQFLINNSILAHQQ 745
Query: 480 RDAF 483
AF
Sbjct: 746 MWAF 749
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 31/55 (56%)
Query: 315 EILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGP 369
E +T L+ +E +G +IG+GG + ++ + IK+ G ++R I +SGP
Sbjct: 671 EPVTRELIISNELIGCIIGRGGTTVNEIRNISKAQIKISNCEDGAKERKITLSGP 725
Score = 39.7 bits (91), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 60/133 (45%), Gaps = 18/133 (13%)
Query: 165 ERMVEVEPETEVADQENTKSSK-----FVLRLLVLSTQVGCLLGKGGCVIKQIDKLPTCA 219
ER+V + TE T S+ F LL ++TQ G ++GKGG IK++ +L +
Sbjct: 242 ERIVTITGTTEQISVAFTLMSQKFEDDFTQGLLRMATQCGSIIGKGGSRIKEVRELTGAS 301
Query: 220 L---------ASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPD 270
+ +++ V I+G + K ++ + +D SP IP P
Sbjct: 302 IQVASEALPASTERTVTISGAAKAISKCVRHLCDIFVD-SPAKGPVIPYR---PKPAFTS 357
Query: 271 HSVSSQGAPYATG 283
+++ G+P+ TG
Sbjct: 358 QNMTCPGSPFPTG 370
Score = 38.9 bits (89), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%)
Query: 593 VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLI 652
+++ L+ I G G + +IR IS A+I I++ + GA E I +SG + + AQ LI
Sbjct: 677 LIISNELIGCIIGRGGTTVNEIRNISKAQIKISNCEDGAKERKITLSGPMQAVNLAQFLI 736
Query: 653 QAFVMSETE 661
+++ +
Sbjct: 737 NNSILAHQQ 745
>gi|327265639|ref|XP_003217615.1| PREDICTED: poly(rC)-binding protein 4-like [Anolis carolinensis]
Length = 422
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 84/165 (50%), Gaps = 27/165 (16%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT R+L H + VG +IGK G ++ +++++ I + E +R+ I+G
Sbjct: 28 LTLRMLMHGKEVGSIIGKKGETVKRIREQSTARITISEG--SCPERITTITGST------ 79
Query: 377 SAPQDAVLRVQTRIARAIPDN-----------REQTVMTRLLVASNQIGCLLGKGGSIIA 425
DAV R + IA + ++ + V RL++ ++Q G L+GK G+ I
Sbjct: 80 ----DAVFRAVSMIAFKLEEDLGTGAINGGTVSKPPVTLRLVIPASQCGSLIGKAGAKIK 135
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
E+R+ +GA +++ G D +P + E V ++G +A+ + + QI
Sbjct: 136 EIRETTGAQVQVAG-DLLP---NSTERAVTVSGVPDAIIQCVRQI 176
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 82/390 (21%), Positives = 147/390 (37%), Gaps = 124/390 (31%)
Query: 179 QENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKLPTCALASDE------VVQITGEV 232
+E S LR+L+ +VG ++GK G +K+I + T + E + ITG
Sbjct: 20 EETELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSTARITISEGSCPERITTITGST 79
Query: 233 DTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIHL 292
D V +A+ +I+ +L ++ TG +
Sbjct: 80 DAVFRAVSMIAFKLEED------------------------------LGTGAIN------ 103
Query: 293 PMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV 352
G + +P +T RL+ + G +IGK GA I+ +++ TG ++V
Sbjct: 104 -----------GGTVSKPP-----VTLRLVIPASQCGSLIGKAGAKIKEIRETTGAQVQV 147
Query: 353 M-EAVSGTEDRLIVISG--------------------------PAHPDDRI-----SAPQ 380
+ + + +R + +SG P HP+ + SA Q
Sbjct: 148 AGDLLPNSTERAVTVSGVPDAIIQCVRQICAVILESPPKGATIPYHPNLSLGPVLLSANQ 207
Query: 381 DAVLR------VQTRIAR---------------------AIPDNREQTVMTRLLVASNQI 413
++ Q +A+ A D Q LV ++ I
Sbjct: 208 GFSMQGQYGGISQAEVAKLQQLSGHPVSFSSLGQTPSIVAGLDTNSQNSSQEFLVPNDLI 267
Query: 414 GCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTR 473
GC++G+ GS I+E+R++SGA+I+I + + E V I G ++ A + I+
Sbjct: 268 GCIIGRQGSKISEIRQMSGAHIKIGNQTE-----GSAERHVTITGTPVSITLAQYLISAC 322
Query: 474 LRHHFFRDAFPSINRPLNPTFLDQVSPFPS 503
L P ++ L TF ++P P+
Sbjct: 323 LETAKSTSQTPPVD--LGMTFSQPLTPSPA 350
Score = 42.7 bits (99), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%)
Query: 594 VVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQ 653
+VP L+ I G G+ + +IRQ+S A I I + G+ E + I+GTP AQ LI
Sbjct: 261 LVPNDLIGCIIGRQGSKISEIRQMSGAHIKIGNQTEGSAERHVTITGTPVSITLAQYLIS 320
Query: 654 AFVMSETETT 663
A + + T+
Sbjct: 321 ACLETAKSTS 330
>gi|403216407|emb|CCK70904.1| hypothetical protein KNAG_0F02390 [Kazachstania naganishii CBS
8797]
Length = 511
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 88/401 (21%), Positives = 155/401 (38%), Gaps = 104/401 (25%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
+ R+LC V V+G G+ ++ I +DT I V + + ER++ +
Sbjct: 108 VHIRMLCLVKDASAVVGPKGDAITHIKRDTNTRINVSDNLKNVRERVIYVRGQ------C 161
Query: 106 ENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFE 165
EN+ ++ E+ N + S N K DS N L+ EK T+ ++
Sbjct: 162 ENVASAFEQISNCIYNKCKRG-LSKNGKNDSNN-------SLSDEKSTTSTDGSI----- 208
Query: 166 RMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKLPTCAL----- 220
+ E + D + K L+LL+ +G ++GK G +K+I++ + L
Sbjct: 209 ----TKEEEDDTDGSKNQQLKISLQLLMPHHLMGYIIGKNGSRLKEIEEASSARLHASPH 264
Query: 221 ----ASDEVVQITGEVDTVRKALKLISHQLLDNSPR--DHESI---PGNPTGPSHPLPDH 271
++D +++++G ++ KA+ IS LL N R + ++I PG+ ++
Sbjct: 265 QLLPSTDRILRLSGTPTSIGKAIFHISQTLLLNKDRLKNKKTIFYQPGSIYSTLRNGSNN 324
Query: 272 SVSSQG---------------------APYATGHRDVADIHLPMPPSIP----------- 299
+S QG PY+ +RD + LPM IP
Sbjct: 325 HISKQGLNVTNTNEMNGFVSRDTPNFYNPYSNSNRDGS---LPMVMMIPPVMAQTPPQKH 381
Query: 300 -----KFHESGVLDRPKPSPEILTF--------------------------RLLCHDERV 328
S ++ + + +F + + V
Sbjct: 382 IAELHHLQRSQIVYTAEKVANVASFVPNSSIPNVRIVEGSFTSAPMAIVKQEIFIDENFV 441
Query: 329 GGVIGKGGAIIRSLKQETGCDIKVMEAVSG-TEDRLIVISG 368
G VIGK G I S+K+ TGC I + + G T +R +VI G
Sbjct: 442 GNVIGKEGKHINSIKETTGCSIFIDDPEKGETSERKLVIEG 482
>gi|383858850|ref|XP_003704912.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Megachile rotundata]
Length = 624
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 150/320 (46%), Gaps = 38/320 (11%)
Query: 175 EVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIKQI----DKLPTCALASD----- 223
EV QE +K L++L + +G ++GKGG IK+I D T + +D
Sbjct: 253 EVMQQEANSINKGEITLKILAHNNLIGRIIGKGGTTIKRIMQDTDTKITVSSINDINSFN 312
Query: 224 --EVVQITGEVDTVRKALKLISHQLLDNSPRDHESI-PGNPTGPS-HPLPDHSVSSQGAP 279
++ + G ++ + KA +IS +L + D +++ P + P HP+ +S+ G
Sbjct: 313 LERIITVKGTIENMSKAESMISSKLRQSYENDLQAMAPQSMMFPGLHPMA--MMSTAGMG 370
Query: 280 YAT---GHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGG 336
Y++ G P S+P + GV P + F L + VG +IG G
Sbjct: 371 YSSRGPGLYGSGPAPYPYQASLPP--QQGV---PATDTQETAF-LYIPNSSVGAIIGTKG 424
Query: 337 AIIRSLKQETGCDIKVME------AVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRI 390
+ IR++ + +G +K+ A TE ++ ++ P+ + A +++
Sbjct: 425 SHIRNIIRFSGASVKIAPIEQDKPAEQQTERKVTIV---GSPESQWKAQYLIFEKMREEG 481
Query: 391 ARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASEN 450
A D+ T+ +LV S Q+G ++GKGG + E+++++G+ I+ L + Q +++
Sbjct: 482 FVAGTDDVRLTI--EILVPSAQVGRIIGKGGQNVRELQRVTGSIIK-LSEQQSTSPSADE 538
Query: 451 EEVVLINGEFEAVQEALFQI 470
E V I G F +VQ A +I
Sbjct: 539 EATVHIIGPFFSVQSAQRRI 558
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 140/342 (40%), Gaps = 65/342 (19%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRIS 377
R+L + VG +IG+ G+ IR + Q T + V + G+ ++ I I G +P++ +
Sbjct: 189 LRILVQSDMVGAIIGRQGSTIRQITQMTRARVDVHRKDNVGSLEKAITIYG--NPENCTN 246
Query: 378 APQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRI 437
A + +L V + A +I + ++L +N IG ++GKGG+ I + + + I +
Sbjct: 247 ACKK-ILEVMQQEANSINKGE---ITLKILAHNNLIGRIIGKGGTTIKRIMQDTDTKITV 302
Query: 438 LGKDQIPKCASEN-EEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLD 496
I S N E ++ + G E + +A I+++LR + D + + P
Sbjct: 303 ---SSINDINSFNLERIITVKGTIENMSKAESMISSKLRQSYENDL-----QAMAP---- 350
Query: 497 QVSPFPSFIGRRELSPPGM-YSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPG 555
Q FP +S GM YS+ GP + GP P +P ++
Sbjct: 351 QSMMFPGLHPMAMMSTAGMGYSSRGPGLYG----SGPAP----YP-----------YQAS 391
Query: 556 MPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIR 615
+PP G P + +P S V I G G+ ++ I
Sbjct: 392 LPPQ------------------QGVP--ATDTQETAFLYIPNSSVGAIIGTKGSHIRNII 431
Query: 616 QISDAKITIT-----DPKPGATETVIIISGTPEQTHAAQSLI 652
+ S A + I P TE + I G+PE AQ LI
Sbjct: 432 RFSGASVKIAPIEQDKPAEQQTERKVTIVGSPESQWKAQYLI 473
>gi|190344879|gb|EDK36648.2| hypothetical protein PGUG_00746 [Meyerozyma guilliermondii ATCC
6260]
Length = 545
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 133/341 (39%), Gaps = 69/341 (20%)
Query: 314 PEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPD 373
P ++FR+ C + VIGK G +I L+++ I+V E + ++R+I + GPA
Sbjct: 199 PTYVSFRMYCPVKEASFVIGKRGDMINHLREKANARIQVSENIKDVQERIISVKGPA--- 255
Query: 374 DRISAPQDAVLRVQTRIARAI---PDNREQTVMTR-----LLVASNQIGCLLGKGGSIIA 425
+ V + I RAI P++ ++M+R +L+ +G ++GKGGS
Sbjct: 256 -------ENVAKAFGLITRAILEEPEDEPASIMSRQYNLKVLIPHPMVGYIIGKGGSKFR 308
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTR-------LRHHF 478
E+ + S A ++ + +P + V+ + G +A+ A++ I+ L+ H
Sbjct: 309 EIEENSAAKLK-AAEQPLPNST---DRVLSVLGVGDAIHIAIYYISQVIIEHKDILKKHK 364
Query: 479 FRDAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSF 538
P N+ +N T L P Y N G +G P G
Sbjct: 365 IVYYTPGNNQLMNNTM--------------GLIPNNTYGNTG-------IIGNDPIQGG- 402
Query: 539 HPHDDHSAFMHHIHR---PGMPPHMPDMKPWGPQGLMEVGGPMGFPDFV---------GP 586
+ F H+ R P P H P Q + G D + G
Sbjct: 403 ------APFQHNYQRQFQPSAPSHNQITTPVPTQSYTDEHGNTMIGDVITSVPVPAGTGT 456
Query: 587 PHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDP 627
V V + + + G+ G +KQIR+ S +P
Sbjct: 457 DKFSEDVFVANTNIGSVIGKGGNNIKQIRESSGCSYVKIEP 497
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 76/362 (20%), Positives = 142/362 (39%), Gaps = 108/362 (29%)
Query: 40 KSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASD 99
+S P + FR+ CPV + VIGK G+M++ + + I+V E + ER++ +
Sbjct: 196 ESDPTYVSFRMYCPVKEASFVIGKRGDMINHLREKANARIQVSENIKDVQERIISV---- 251
Query: 100 NKKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKA 159
K +EN+ + GL + +A
Sbjct: 252 --KGPAENVAKAF---------------------------------GL--------ITRA 268
Query: 160 LLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKLPTCA 219
+L EPE E A + S ++ L++L+ VG ++GKGG ++I++
Sbjct: 269 IL--------EEPEDEPA---SIMSRQYNLKVLIPHPMVGYIIGKGGSKFREIEENSAAK 317
Query: 220 L---------ASDEVVQITGEVDTVRKALKLIS------------HQLLDNSPRDHE--- 255
L ++D V+ + G D + A+ IS H+++ +P +++
Sbjct: 318 LKAAEQPLPNSTDRVLSVLGVGDAIHIAIYYISQVIIEHKDILKKHKIVYYTPGNNQLMN 377
Query: 256 ----SIPGNPTGPSHPLPD----------HSVSSQGAPYATGHRDVADIHLPMPP-SIPK 300
IP N G + + + H+ Q P A H + P+P S
Sbjct: 378 NTMGLIPNNTYGNTGIIGNDPIQGGAPFQHNYQRQFQPSAPSHNQIT---TPVPTQSYTD 434
Query: 301 FHESGVL-----DRPKPS---PEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV 352
H + ++ P P+ + + + + +G VIGKGG I+ +++ +GC
Sbjct: 435 EHGNTMIGDVITSVPVPAGTGTDKFSEDVFVANTNIGSVIGKGGNNIKQIRESSGCSYVK 494
Query: 353 ME 354
+E
Sbjct: 495 IE 496
>gi|121710626|ref|XP_001272929.1| KH domain RNA-binding protein [Aspergillus clavatus NRRL 1]
gi|119401079|gb|EAW11503.1| KH domain RNA-binding protein [Aspergillus clavatus NRRL 1]
Length = 362
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 81/166 (48%), Gaps = 5/166 (3%)
Query: 316 ILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDR 375
+LT R + + G +IGK G + L+ ETG V + V G DR++ ++GP R
Sbjct: 43 MLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTGPLQGTAR 102
Query: 376 ISA-PQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAY 434
A +L ++ N T RLL++ NQ+G ++G+ G I ++ SG
Sbjct: 103 AYALVAKGLLEGAPQMGMGGIVNNNGTHPVRLLISHNQMGTIIGRQGLKIKHIQDASGVR 162
Query: 435 IRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFR 480
+ + K+ +P+ E +V + G E +++A+++I L + R
Sbjct: 163 M-VAQKEMLPQST---ERIVEVQGTPEGIEKAVWEIGKCLIDDWQR 204
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 105/242 (43%), Gaps = 27/242 (11%)
Query: 158 KALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKLPT 217
+A LV + ++E P+ + N + V RLL+ Q+G ++G+ G IK I
Sbjct: 102 RAYALVAKGLLEGAPQMGMGGIVNNNGTHPV-RLLISHNQMGTIIGRQGLKIKHIQDASG 160
Query: 218 CAL---------ASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPT-----G 263
+ +++ +V++ G + + KA+ I L+D+ R +I NP G
Sbjct: 161 VRMVAQKEMLPQSTERIVEVQGTPEGIEKAVWEIGKCLIDDWQRGTGTILYNPAVRASVG 220
Query: 264 PSHPLPDHSVSSQGA---PYA-TGHRDVADIHLPMPPSIPKFHESGVLDRPKP-----SP 314
+ ++ +S G PY TG+ AD + +R P
Sbjct: 221 TGSSINTNTTASNGYNSRPYNRTGNG--ADFSDGQSAGYSRRSNPDTSNRGYPLVTEDGE 278
Query: 315 EILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA-VSGTEDRLIVISGPAHPD 373
EI T + + VG +IG+GG+ I +++ +G I + +A T +R+ I G A +
Sbjct: 279 EIQTQNISIPADMVGCIIGRGGSKITEIRRSSGARISIAKAPHDETGERMFTIMGSAQAN 338
Query: 374 DR 375
++
Sbjct: 339 EK 340
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 145/355 (40%), Gaps = 52/355 (14%)
Query: 159 ALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI-DKLPT 217
A+ +V E +++ P+TE E S LR +V S + G ++GK G + + D+
Sbjct: 20 AMNVVDEGDMDITPKTE----EEYAQSMLTLRAIVSSKEAGVIIGKAGKNVADLRDETGV 75
Query: 218 CALAS-------DEVVQITGEVDTVRKALKLISHQLLDNSPRDHES--IPGNPTGPSHPL 268
A S D V+ +TG + +A L++ LL+ +P+ + N T P L
Sbjct: 76 KAGVSKVVPGVHDRVLTVTGPLQGTARAYALVAKGLLEGAPQMGMGGIVNNNGTHPVRLL 135
Query: 269 PDHS-----VSSQGAPY-----ATGHRDVADIHLPMPPSIPKFHESGVLDRP----KPSP 314
H+ + QG A+G R VA + +P S + E V P K
Sbjct: 136 ISHNQMGTIIGRQGLKIKHIQDASGVRMVAQKEM-LPQSTERIVE--VQGTPEGIEKAVW 192
Query: 315 EILTFRL---------LCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIV 365
EI + + ++ V +G G +I + G + + D
Sbjct: 193 EIGKCLIDDWQRGTGTILYNPAVRASVGTGSSINTNTTASNGYNSRPYNRTGNGAD---F 249
Query: 366 ISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIA 425
G + R S P + R + ++ E+ + + ++ +GC++G+GGS I
Sbjct: 250 SDGQSAGYSRRSNPDTS-----NRGYPLVTEDGEEIQTQNISIPADMVGCIIGRGGSKIT 304
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFR 480
E+R+ SGA I I + P + E + I G +A ++AL+ + L R
Sbjct: 305 EIRRSSGARISIA---KAPHDET-GERMFTIMGSAQANEKALYLLYENLEAEKTR 355
>gi|410970835|ref|XP_003991882.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 1 [Felis catus]
Length = 536
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 143/352 (40%), Gaps = 73/352 (20%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV-MEAVSGTEDRLIVISGPAHPDDRIS 377
R+L + VG +IGK G I+++ ++T + + + SG ++ + I A P+
Sbjct: 133 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIH--ATPEGTSE 190
Query: 378 APQDAVLRV------QTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLS 431
A + +L + +T++A IP ++L + +G L+GK G + ++ +
Sbjct: 191 ACR-MILEIMQKEADETKLAEEIP--------LKILAHNGLVGRLIGKEGRNLKKIEHET 241
Query: 432 GAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLN 491
G I I + E + + G EA A +I +LR F D ++N+ N
Sbjct: 242 GTKITISSLQDL--SIYNPERTITVKGTVEACANAEVEIMKKLREAFENDML-AVNQQAN 298
Query: 492 PTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPP---------GSFHPHD 542
I LS G++S + PPP +HP
Sbjct: 299 ------------LIPGLNLSALGIFST---------GLSVLPPPTGPRGAPPAPPYHPFA 337
Query: 543 DHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRR-VPVVVPRSLVP 601
HS + ++ PPH +GP FP P + V + +P V
Sbjct: 338 THSGYFSSLY----PPHQ-----FGP-----------FPHHHSYPEQEIVNLFIPTQAVG 377
Query: 602 IIQGEDGACLKQIRQISDAKITITDPK-PGATETVIIISGTPEQTHAAQSLI 652
I G+ GA +KQ+ + + A I I + P +E ++II+G PE AQ I
Sbjct: 378 AIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI 429
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 111/508 (21%), Positives = 197/508 (38%), Gaps = 140/508 (27%)
Query: 14 DDNHTEPNGKEKSQKLAGDYSENQPSKSFPGG--------IMFRVLCPVSKIDGVIGKDG 65
D+ + P+ +++Q+ GD+S + + PGG R+L P + +IGK+G
Sbjct: 94 DEEVSSPSPPQRAQR--GDHSSREQGHA-PGGSSQARQIDFPLRILVPTQFVGAIIGKEG 150
Query: 66 EMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASV 125
+ I++ T + I R EN+G E V
Sbjct: 151 LTIKNITKQTQSRV-------------------------------DIHRKENSGAAEKPV 179
Query: 126 ADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSS 185
+ EG+ +A ++ E M + ET++A++
Sbjct: 180 TIHA-------TPEGT---------------SEACRMILEIMQKEADETKLAEE------ 211
Query: 186 KFVLRLLVLSTQVGCLLGKGGCVIKQID-----KLPTCALAS------DEVVQITGEVDT 234
L++L + VG L+GK G +K+I+ K+ +L + + + G V+
Sbjct: 212 -IPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEA 270
Query: 235 VRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGA---------------- 278
A I +L + D ++ ++ +P ++S+ G
Sbjct: 271 CANAEVEIMKKLREAFENDMLAV----NQQANLIPGLNLSALGIFSTGLSVLPPPTGPRG 326
Query: 279 --------PYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGG 330
P+AT + ++ P H+ G PE L + VG
Sbjct: 327 APPAPPYHPFATHSGYFSSLYPP--------HQFGPFPHHHSYPEQEIVNLFIPTQAVGA 378
Query: 331 VIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRISAPQDAVLRVQTR 389
+IGK GA I+ L + G IK+ A +R+++I+GP +A + Q R
Sbjct: 379 IIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPP----------EAQFKAQGR 428
Query: 390 IARAIPD------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQI 443
I + + E + + V S+ G ++GKGG + E++ L+ A + I+ +DQ
Sbjct: 429 IFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQT 487
Query: 444 PKCASENEEVVL-INGEFEAVQEALFQI 470
P ENEEV++ I G F A Q A +I
Sbjct: 488 P---DENEEVIVRIIGHFFASQTAQRKI 512
>gi|402592326|gb|EJW86255.1| hypothetical protein WUBG_02833 [Wuchereria bancrofti]
Length = 313
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 143/341 (41%), Gaps = 73/341 (21%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISA 378
RLL G +IGK G +++++ E CD V S T +R++ + ++A
Sbjct: 42 LRLLVTSRGAGAIIGKKGESVKNIQTE--CDATVSVPDSQTPERVVQL---------VAA 90
Query: 379 PQDAVLRVQTRIAR--AIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIR 436
++ V V+ IAR + DN+++ ++LV + G ++G+GGS I E+R+ +G ++
Sbjct: 91 VENVVKCVEMIIARIDEVHDNQDRDSELKVLVHQSHAGAVIGRGGSRIKELREENGVDLK 150
Query: 437 ILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLD 496
+ + C E ++ ING+ E + L I L+ + PS RP F D
Sbjct: 151 VYSE----CCPQSTERIIQINGKPEKIVACLVTIINTLKEIPIKG--PS--RPYESIFFD 202
Query: 497 QVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGM 556
M +N ++ G DHS
Sbjct: 203 P-----------------MVAN------EYGGYAG-----------DHSGR--------- 219
Query: 557 PPHMPDMKPWGPQGLMEVGGPMGF--PDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQI 614
M+ +GP+G + + P G P + P V VP L I G G +++I
Sbjct: 220 -----GMRGYGPRGRIPL-PPYGSVPPAYDDGPLETAQVTVPNELGGTIIGRGGERIRRI 273
Query: 615 RQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAF 655
R S A I I + P E +I ISGTP Q AQ L+Q +
Sbjct: 274 RDESGAHIKIEEEDPNG-ERIITISGTPSQIEMAQFLLQQW 313
>gi|348519761|ref|XP_003447398.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 3 [Oreochromis niloticus]
Length = 588
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 142/308 (46%), Gaps = 53/308 (17%)
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQID-----KLPTCALAS------DEVVQITGEVDTVRK 237
L++L ++ VG L+GK G +K+I+ K+ +L + + + G +D K
Sbjct: 282 LKILAHNSLVGRLIGKEGRNLKKIEEDTGTKITISSLQDLTIYNPERTITVKGSIDACCK 341
Query: 238 ALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLP-MPP 296
A I+ +L + D +I ++ +P ++++ G +++G LP +PP
Sbjct: 342 AEVEITKKLREAYENDIAAI----NQQANLIPGLNLNALGI-FSSG--------LPVLPP 388
Query: 297 S------IPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDI 350
+ +P +G + +PE L + VG +IGK G I+ L G I
Sbjct: 389 AAGPRSAVPAVAPAGYNPFLQQAPEQEVVYLFIPTQAVGALIGKKGQHIKQLAHFAGASI 448
Query: 351 KVMEAVS-GTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPD------NREQTVM 403
K+ A S +R+++I+G +A + Q RI + + E +
Sbjct: 449 KIAPAESPDVTERMVIITGTP----------EAQFKAQGRIFGKLKEENFFSAKEEVKLE 498
Query: 404 TRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEV-VLINGEFEA 462
T + V S+ G ++GKGG + E++ L+ A + I+ +DQ P EN+EV V I+G F A
Sbjct: 499 THIKVPSSAAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENDEVFVKISGHFFA 554
Query: 463 VQEALFQI 470
Q A +I
Sbjct: 555 SQTAQRKI 562
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 137/354 (38%), Gaps = 65/354 (18%)
Query: 304 SGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQET--GCDIKVMEAVSGTED 361
SG P+P R+L + VG +IGK G I+ + ++T DI E E
Sbjct: 186 SGGYGSPRPRQHDFPLRMLVPTQFVGAIIGKEGNTIKDVTKQTQSKVDIHRKENAGAAEK 245
Query: 362 RLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGG 421
+ + S P + SA +L + + A + + ++L ++ +G L+GK G
Sbjct: 246 PITIHSTP----EGCSAACRMILDIMQKEANETKTTED--IPLKILAHNSLVGRLIGKEG 299
Query: 422 SIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRD 481
+ ++ + +G I I + E + + G +A +A +IT +LR + D
Sbjct: 300 RNLKKIEEDTGTKITISSLQDL--TIYNPERTITVKGSIDACCKAEVEITKKLREAYEND 357
Query: 482 AFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPH 541
+IN+ N I L+ G++S+ P PP +
Sbjct: 358 -IAAINQQAN------------LIPGLNLNALGIFSSGLPVL----------PPAA---- 390
Query: 542 DDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFV--GPPHRRVPVVVPRSL 599
GP+ + P G+ F+ P V + +P
Sbjct: 391 -------------------------GPRSAVPAVAPAGYNPFLQQAPEQEVVYLFIPTQA 425
Query: 600 VPIIQGEDGACLKQIRQISDAKITITDPK-PGATETVIIISGTPEQTHAAQSLI 652
V + G+ G +KQ+ + A I I + P TE ++II+GTPE AQ I
Sbjct: 426 VGALIGKKGQHIKQLAHFAGASIKIAPAESPDVTERMVIITGTPEAQFKAQGRI 479
>gi|431921619|gb|ELK18971.1| Poly(rC)-binding protein 2 [Pteropus alecto]
Length = 446
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 116/270 (42%), Gaps = 61/270 (22%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T +SK LRL+V ++Q G L+GKGGC IK
Sbjct: 57 TNAIFKAFAMIIDKL---EEDISSSMTNSTAASKPPVTLRLVVPASQCGSLIGKGGCKIK 113
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPR------ 252
+I D LP +++ + I G ++ + +K I +L++ P+
Sbjct: 114 EIRESTGAQVQVAGDMLPN---STERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPY 170
Query: 253 ----------------------DHESIPG-------NPTGPSHPLPDHSVSSQGAPYATG 283
D S P NP PL +++ Q YA
Sbjct: 171 RPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQ---YAIP 227
Query: 284 HRDVADIH-LPMPPS-IPKFH-ESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIR 340
D+ +H L M S P H +G S + + L ++ +G +IG+ GA I
Sbjct: 228 QPDLTKLHQLAMQQSHFPMTHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKIN 287
Query: 341 SLKQETGCDIKVMEAVSGTEDRLIVISGPA 370
++Q +G IK+ V G+ DR + I+G A
Sbjct: 288 EIRQMSGAQIKIANPVEGSTDRQVTITGSA 317
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 84/157 (53%), Gaps = 19/157 (12%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H GK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 14 LTIRLLMH--------GKKGESVKKMREESGARINISEG--NCPERIITLAGPTNAIFKA 63
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I+ ++ ++ + V RL+V ++Q G L+GKGG I E+R+ +GA
Sbjct: 64 FA--MIIDKLEEDISSSMTNSTAASKPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 121
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
+++ G D +P + E + I G +++ E + QI
Sbjct: 122 QVQVAG-DMLP---NSTERAITIAGIPQSIIECVKQI 154
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%)
Query: 593 VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLI 652
+ +P L+ I G GA + +IRQ+S A+I I +P G+T+ + I+G+ AQ LI
Sbjct: 268 LTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLI 327
Score = 39.7 bits (91), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 396 DNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVL 455
D QT L + ++ IGC++G+ G+ I E+R++SGA I+I P S + +V
Sbjct: 258 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN----PVEGSTDRQVT- 312
Query: 456 INGEFEAVQEALFQITTRLRH 476
I G ++ A + I L +
Sbjct: 313 ITGSAASISLAQYLINVSLEN 333
>gi|169775165|ref|XP_001822050.1| RNA-binding protein rnc1 [Aspergillus oryzae RIB40]
gi|238496215|ref|XP_002379343.1| KH domain RNA-binding protein [Aspergillus flavus NRRL3357]
gi|83769913|dbj|BAE60048.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220694223|gb|EED50567.1| KH domain RNA-binding protein [Aspergillus flavus NRRL3357]
gi|391872927|gb|EIT82002.1| polyC-binding proteins alphaCP-1 [Aspergillus oryzae 3.042]
Length = 357
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 141/350 (40%), Gaps = 50/350 (14%)
Query: 316 ILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDR 375
+LT R + + G +IGK G + L+ ETG V + V G DR++ ++GP R
Sbjct: 42 MLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTGPLQGTAR 101
Query: 376 ISAPQDAVLRV---QTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSG 432
A L Q + + +N V RLL++ NQ+G ++G+ G I ++ SG
Sbjct: 102 AYALVAKGLLEGAPQMGMGGVVSNNGTHPV--RLLISHNQMGTIIGRSGLKIKHIQDASG 159
Query: 433 AYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNP 492
+ + K+ +P+ E +V + G E +++A+++I L + R + NP
Sbjct: 160 VRM-VAQKEMLPQS---TERIVEVQGTPEGIEKAVWEIGKCLIDDWQRGTGTIL---YNP 212
Query: 493 TFLDQV--SPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHH 550
V +P +G S P Y+ G D GG +
Sbjct: 213 AVRASVGTAPVNQNVGNGYSSRP--YNRTGNGADFSDQSGG------------------Y 252
Query: 551 IHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGAC 610
R PD G P+ D G + + +P +V I G G+
Sbjct: 253 GRRSN-----PDTSNRGY--------PLVTED--GEEIQTQNISIPADMVGCIIGRAGSK 297
Query: 611 LKQIRQISDAKITITD-PKPGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
+ +IR+ S A+I+I P E + I G+ + A L+ + +E
Sbjct: 298 ITEIRRSSGARISIAKAPHDDTGERMFTIMGSAQANEKALYLLYENLEAE 347
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 105/238 (44%), Gaps = 23/238 (9%)
Query: 158 KALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKLPT 217
+A LV + ++E P+ + + + V RLL+ Q+G ++G+ G IK I
Sbjct: 101 RAYALVAKGLLEGAPQMGMGGVVSNNGTHPV-RLLISHNQMGTIIGRSGLKIKHIQDASG 159
Query: 218 CAL---------ASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNP------- 261
+ +++ +V++ G + + KA+ I L+D+ R +I NP
Sbjct: 160 VRMVAQKEMLPQSTERIVEVQGTPEGIEKAVWEIGKCLIDDWQRGTGTILYNPAVRASVG 219
Query: 262 TGPSHPLPDHSVSSQGAPYA-TGH-RDVADIHLPMP-PSIPKFHESGVLDRPKPSPEILT 318
T P + + SS+ PY TG+ D +D S P G + EI T
Sbjct: 220 TAPVNQNVGNGYSSR--PYNRTGNGADFSDQSGGYGRRSNPDTSNRGYPLVTEDGEEIQT 277
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA-VSGTEDRLIVISGPAHPDDR 375
+ + VG +IG+ G+ I +++ +G I + +A T +R+ I G A +++
Sbjct: 278 QNISIPADMVGCIIGRAGSKITEIRRSSGARISIAKAPHDDTGERMFTIMGSAQANEK 335
>gi|125597123|gb|EAZ36903.1| hypothetical protein OsJ_21247 [Oryza sativa Japonica Group]
Length = 114
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 44/66 (66%)
Query: 593 VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLI 652
VV+P+S V + G+ L QI ++S A +T+ D +P A E V+ ISGTPEQ AQSL+
Sbjct: 41 VVIPKSAVASLTMRAGSKLAQISEMSGATVTLADERPDAIEKVVRISGTPEQADKAQSLL 100
Query: 653 QAFVMS 658
Q F++S
Sbjct: 101 QGFILS 106
>gi|223949173|gb|ACN28670.1| unknown [Zea mays]
gi|238010644|gb|ACR36357.1| unknown [Zea mays]
gi|413924015|gb|AFW63947.1| transcribed sequence 1087 protein [Zea mays]
Length = 344
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 148/361 (40%), Gaps = 60/361 (16%)
Query: 308 DRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVM---EAVSGTEDRLI 364
D+ KP+ R L + G +IGKGG+ I + ++G I++ E GT DR+I
Sbjct: 36 DKEKPT----HLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSNEFFPGTNDRII 91
Query: 365 VISGPAHPDDRISAPQDAVLRVQTRIARAIPDNR-EQTVMTRLLVASNQIGCLLGKGGSI 423
++SG D + + +L + +A N E RL+V ++ G ++GKGG+
Sbjct: 92 MVSGLF---DEVMKAMELIL--EKLLAEGEEFNEAEARPKVRLVVPNSSCGGIIGKGGAT 146
Query: 424 IAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAF 483
I + S A I+I +D ++ +V I G F+ A+ I +L
Sbjct: 147 IKSFIEESHAGIKISPQDN--NYVGLHDRLVTITGTFDNQMNAIDLILKKLSE------- 197
Query: 484 PSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDD 543
++ P N + SPFP + G S PG+ P G P
Sbjct: 198 -DVHYPPNLS-----SPFP-YAGLTFPSYPGV------------------PVGYMIPQVP 232
Query: 544 HSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPII 603
+S +++ G + KP PM P + + + + +
Sbjct: 233 YSNAVNYGPNNGYGGRYQNNKPT---------TPMRSPA-SNEAQESLTIGIADEHIGAV 282
Query: 604 QGEDGACLKQIRQISDAKITITDPK---PGATETVIIISGTPEQTHAAQSLIQAFVMSET 660
G G + +I Q S A+I I+D G ++ + I+GTPE A+S+I V + +
Sbjct: 283 VGRAGRNITEIIQASGARIKISDRGDYISGTSDRKVTITGTPEAIRTAESMIMQRVSASS 342
Query: 661 E 661
E
Sbjct: 343 E 343
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 109/260 (41%), Gaps = 51/260 (19%)
Query: 137 VNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLST 196
N+ +++ GL E V KA+ L+ E+++ ++ N ++ +RL+V ++
Sbjct: 86 TNDRIIMVSGLFDE-----VMKAMELILEKLLAE------GEEFNEAEARPKVRLVVPNS 134
Query: 197 QVGCLLGKGGCVIKQIDKLPTCALA-----------SDEVVQITGEVDTVRKALKLISHQ 245
G ++GKGG IK + + D +V ITG D A+ LI +
Sbjct: 135 SCGGIIGKGGATIKSFIEESHAGIKISPQDNNYVGLHDRLVTITGTFDNQMNAIDLILKK 194
Query: 246 LLDN--------SPRDHE-----SIPGNPTGPSHP-LPDHSVSSQGAPYATGHRDVADIH 291
L ++ SP + S PG P G P +P + + G G R +
Sbjct: 195 LSEDVHYPPNLSSPFPYAGLTFPSYPGVPVGYMIPQVPYSNAVNYGPNNGYGGR-----Y 249
Query: 292 LPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIK 351
P+ P + P + + + DE +G V+G+ G I + Q +G IK
Sbjct: 250 QNNKPTTP-------MRSPASNEAQESLTIGIADEHIGAVVGRAGRNITEIIQASGARIK 302
Query: 352 VM---EAVSGTEDRLIVISG 368
+ + +SGT DR + I+G
Sbjct: 303 ISDRGDYISGTSDRKVTITG 322
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 74/194 (38%), Gaps = 71/194 (36%)
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQIDKLPTCAL-----------ASDEVVQITGEVDTVRK 237
LR LV +T GC++GKGG I + +D ++ ++G D V K
Sbjct: 43 LRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSNEFFPGTNDRIIMVSGLFDEVMK 102
Query: 238 ALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPS 297
A++LI +LL A G
Sbjct: 103 AMELILEKLL---------------------------------AEGE------------- 116
Query: 298 IPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVM---E 354
+F+E+ RPK RL+ + GG+IGKGGA I+S +E+ IK+
Sbjct: 117 --EFNEAEA--RPK-------VRLVVPNSSCGGIIGKGGATIKSFIEESHAGIKISPQDN 165
Query: 355 AVSGTEDRLIVISG 368
G DRL+ I+G
Sbjct: 166 NYVGLHDRLVTITG 179
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 396 DNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVL 455
D++E+ R LV++ GC++GKGGS I + + SGA I++ ++ N+ +++
Sbjct: 35 DDKEKPTHLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSNEF--FPGTNDRIIM 92
Query: 456 INGEFEAVQEALFQITTRL 474
++G F+ V +A+ I +L
Sbjct: 93 VSGLFDEVMKAMELILEKL 111
>gi|410970839|ref|XP_003991884.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 3 [Felis catus]
Length = 542
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 143/352 (40%), Gaps = 73/352 (20%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV-MEAVSGTEDRLIVISGPAHPDDRIS 377
R+L + VG +IGK G I+++ ++T + + + SG ++ + I A P+
Sbjct: 139 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIH--ATPEGTSE 196
Query: 378 APQDAVLRV------QTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLS 431
A + +L + +T++A IP ++L + +G L+GK G + ++ +
Sbjct: 197 ACR-MILEIMQKEADETKLAEEIP--------LKILAHNGLVGRLIGKEGRNLKKIEHET 247
Query: 432 GAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLN 491
G I I + E + + G EA A +I +LR F D ++N+ N
Sbjct: 248 GTKITISSLQDL--SIYNPERTITVKGTVEACANAEVEIMKKLREAFENDML-AVNQQAN 304
Query: 492 PTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPP---------GSFHPHD 542
I LS G++S + PPP +HP
Sbjct: 305 ------------LIPGLNLSALGIFST---------GLSVLPPPTGPRGAPPAPPYHPFA 343
Query: 543 DHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRR-VPVVVPRSLVP 601
HS + ++ PPH +GP FP P + V + +P V
Sbjct: 344 THSGYFSSLY----PPHQ-----FGP-----------FPHHHSYPEQEIVNLFIPTQAVG 383
Query: 602 IIQGEDGACLKQIRQISDAKITITDPK-PGATETVIIISGTPEQTHAAQSLI 652
I G+ GA +KQ+ + + A I I + P +E ++II+G PE AQ I
Sbjct: 384 AIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI 435
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 111/508 (21%), Positives = 197/508 (38%), Gaps = 140/508 (27%)
Query: 14 DDNHTEPNGKEKSQKLAGDYSENQPSKSFPGG--------IMFRVLCPVSKIDGVIGKDG 65
D+ + P+ +++Q+ GD+S + + PGG R+L P + +IGK+G
Sbjct: 100 DEEVSSPSPPQRAQR--GDHSSREQGHA-PGGSSQARQIDFPLRILVPTQFVGAIIGKEG 156
Query: 66 EMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASV 125
+ I++ T + I R EN+G E V
Sbjct: 157 LTIKNITKQTQSRV-------------------------------DIHRKENSGAAEKPV 185
Query: 126 ADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSS 185
+ EG+ +A ++ E M + ET++A++
Sbjct: 186 TIHA-------TPEGT---------------SEACRMILEIMQKEADETKLAEE------ 217
Query: 186 KFVLRLLVLSTQVGCLLGKGGCVIKQID-----KLPTCALAS------DEVVQITGEVDT 234
L++L + VG L+GK G +K+I+ K+ +L + + + G V+
Sbjct: 218 -IPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEA 276
Query: 235 VRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGA---------------- 278
A I +L + D ++ ++ +P ++S+ G
Sbjct: 277 CANAEVEIMKKLREAFENDMLAV----NQQANLIPGLNLSALGIFSTGLSVLPPPTGPRG 332
Query: 279 --------PYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGG 330
P+AT + ++ P H+ G PE L + VG
Sbjct: 333 APPAPPYHPFATHSGYFSSLYPP--------HQFGPFPHHHSYPEQEIVNLFIPTQAVGA 384
Query: 331 VIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRISAPQDAVLRVQTR 389
+IGK GA I+ L + G IK+ A +R+++I+GP +A + Q R
Sbjct: 385 IIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPP----------EAQFKAQGR 434
Query: 390 IARAIPD------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQI 443
I + + E + + V S+ G ++GKGG + E++ L+ A + I+ +DQ
Sbjct: 435 IFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQT 493
Query: 444 PKCASENEEVVL-INGEFEAVQEALFQI 470
P ENEEV++ I G F A Q A +I
Sbjct: 494 P---DENEEVIVRIIGHFFASQTAQRKI 518
>gi|386771595|ref|NP_001246876.1| mushroom-body expressed, isoform H [Drosophila melanogaster]
gi|383292067|gb|AFH04547.1| mushroom-body expressed, isoform H [Drosophila melanogaster]
Length = 433
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 79/164 (48%), Gaps = 26/164 (15%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RL+ + VG +IGK G I+ ++E+G I + + +R++ +SG
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDG--SCPERIVTVSGTT------ 75
Query: 377 SAPQDAVLRVQTRIARAIPDNREQ----------TVMTRLLVASNQIGCLLGKGGSIIAE 426
+A+ T I + + Q + RL+V ++Q G L+GK GS I E
Sbjct: 76 ----NAIFSAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKE 131
Query: 427 MRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
+R+ +G I++ + +P + E V ++G E + + ++QI
Sbjct: 132 IRQTTGCSIQV-ASEMLP---NSTERAVTLSGSAEQITQCIYQI 171
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 393 AIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEE 452
A P NR Q + V+++ IGC++GKGG+ IAE+R++SGA IRI ++ + +
Sbjct: 328 ANPANRAQQQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGNTDR 385
Query: 453 VVLINGEFEAVQEALFQITTRL 474
+ I+G ++V A + I R+
Sbjct: 386 TITISGNPDSVALAQYLINMRI 407
Score = 38.9 bits (89), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 593 VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKP---GATETVIIISGTPEQTHAAQ 649
+ V L+ I G+ G + +IRQIS A I I++ + G T+ I ISG P+ AQ
Sbjct: 341 MTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQ 400
Query: 650 SLIQAFVMSET 660
LI + ET
Sbjct: 401 YLINMRISMET 411
>gi|255719726|ref|XP_002556143.1| KLTH0H06050p [Lachancea thermotolerans]
gi|238942109|emb|CAR30281.1| KLTH0H06050p [Lachancea thermotolerans CBS 6340]
Length = 392
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 80/355 (22%), Positives = 147/355 (41%), Gaps = 51/355 (14%)
Query: 313 SPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHP 372
+ + + R+LC ++ ++G GG I +K+ET I V + + G +R+I I G
Sbjct: 52 NKDYIHLRMLCLVKQASMIVGPGGEKISRMKEETNTRINVSDNIRGVPERVIFIRGRC-- 109
Query: 373 DDRISAPQDAVLRVQTRIARAIP-----DNREQ--TVMTRLLVASNQIGCLLGKGGSIIA 425
+ V +V + RAI ++ EQ T+ +L+ + +GC++G+ GS +
Sbjct: 110 --------EDVAKVFGMVVRAINGETDGESSEQSATLTLNILIPHHMMGCVIGRQGSRLR 161
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPS 485
E+ +LS A + + G +P N+ ++ ++G +A+ A + + + +H
Sbjct: 162 EIEELSAAKL-MAGPQTLPM---SNDRILCVSGVADAIHIATYYVGQTILNH-------- 209
Query: 486 INRPLNPTFLDQVSPF--PSFIGRRELSPPGMYSNFGPSF-HKFDAVGGPPPPGSFHPHD 542
TF + F PS + + +++G S H+ P G H
Sbjct: 210 -----KATFASKKCIFYLPSLL------HSVLVNSYGVSLQHQQQHQYRPGENGKKRLHR 258
Query: 543 DHSAFMHHIHRPGMP--PHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRV--PVVVPRS 598
++ PG+P PHM L P + P + V + +
Sbjct: 259 YSASPDFGYAYPGVPSAPHMAVHNVRVADTL----AAATIPPALAPQLSLIQQEVYIDDN 314
Query: 599 LVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQ 653
V + G+ G + I++ + I I D G +E I+I GTP + A LI
Sbjct: 315 YVGNVIGKGGKHINSIKETTGCSIQIDDHVEGCSERKILIRGTPIGSQTAILLIN 369
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 111/265 (41%), Gaps = 53/265 (20%)
Query: 166 RMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKLP--------- 216
R + E + E ++Q S+ L +L+ +GC++G+ G +++I++L
Sbjct: 121 RAINGETDGESSEQ----SATLTLNILIPHHMMGCVIGRQGSRLREIEELSAAKLMAGPQ 176
Query: 217 TCALASDEVVQITGEVDTVRKALKLISHQLLDNS------------PRDHESIPGNPTGP 264
T +++D ++ ++G D + A + +L++ P S+ N G
Sbjct: 177 TLPMSNDRILCVSGVADAIHIATYYVGQTILNHKATFASKKCIFYLPSLLHSVLVNSYGV 236
Query: 265 SHPLPDHSVSSQGAPYATG----HRDVA--DIHLPMP--PSIPKF--HESGVLDR----- 309
S H Q P G HR A D P PS P H V D
Sbjct: 237 S---LQHQQQHQYRPGENGKKRLHRYSASPDFGYAYPGVPSAPHMAVHNVRVADTLAAAT 293
Query: 310 --PKPSPEILTFR--LLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIV 365
P +P++ + + D VG VIGKGG I S+K+ TGC I++ + V G +R I+
Sbjct: 294 IPPALAPQLSLIQQEVYIDDNYVGNVIGKGGKHINSIKETTGCSIQIDDHVEGCSERKIL 353
Query: 366 ISGPAHPDDRISAPQDAVLRVQTRI 390
I G Q A+L + +I
Sbjct: 354 IRGTP------IGSQTAILLINNKI 372
>gi|347968782|ref|XP_312014.5| AGAP002896-PA [Anopheles gambiae str. PEST]
gi|333467844|gb|EAA08028.5| AGAP002896-PA [Anopheles gambiae str. PEST]
Length = 537
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 105/228 (46%), Gaps = 24/228 (10%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA---VSGTEDRLIVISGPAHPDDR 375
F+ L G +IGKGG I SL+++ G +K+ +A GT +R+ +ISG +
Sbjct: 26 FKTLVPSVAAGAIIGKGGETIASLQKDAGARVKMSKAHDFYPGTTERICLISGTV---EG 82
Query: 376 ISAPQDAV---LRVQTRIARAIPDN-----REQTVMTRLLVASNQIGCLLGKGGSIIAEM 427
I A D + +R + I +A+ + +E+ ++LV + G ++GK G+ I ++
Sbjct: 83 ILAVLDFITDKIREKPDITKALTEADAKQAQERDKQVKILVPNTTAGMIIGKAGAYIKQI 142
Query: 428 RKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSIN 487
++ SG+Y++I Q PK + E + I GE E + A I ++ PS
Sbjct: 143 KEESGSYVQI---SQKPKDLTLQERCITIIGEKENNRIACKMILAKIVED------PSSG 193
Query: 488 RPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFD-AVGGPPP 534
LN ++ D P +F NF S + A+ GP P
Sbjct: 194 TCLNVSYADINGPVANFNPTGSPFAASQNPNFSSSTASLNSAISGPLP 241
>gi|355559801|gb|EHH16529.1| hypothetical protein EGK_11818, partial [Macaca mulatta]
Length = 542
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 111/501 (22%), Positives = 199/501 (39%), Gaps = 126/501 (25%)
Query: 14 DDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIM--------FRVLCPVSKIDGVIGKDG 65
D+ + P+ +++Q+ GD+S + + PGG R+L P + +IGK+G
Sbjct: 100 DEEVSSPSPPQRAQR--GDHSSREQGHA-PGGTSQARQIDFPLRILVPTQFVGAIIGKEG 156
Query: 66 EMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASV 125
+ I++ T + I R EN+G E V
Sbjct: 157 LTIKNITKQTQSRV-------------------------------DIHRKENSGAAEKPV 185
Query: 126 ADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSS 185
+ EG+ +A ++ E M + ET++A++
Sbjct: 186 TIHA-------TPEGT---------------SEACRMILEIMQKEADETKLAEE------ 217
Query: 186 KFVLRLLVLSTQVGCLLGKGGCVIKQID-----KLPTCALAS------DEVVQITGEVDT 234
L++L + VG L+GK G +K+I+ K+ +L + + + G V+
Sbjct: 218 -IPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEA 276
Query: 235 VRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVAD----- 289
A I +L + D ++ ++ +P ++S+ G ++TG ++
Sbjct: 277 CASAEIEIMKKLREAFENDMLAV----NQQANLIPGLNLSALGI-FSTGLSVLSPPAGPR 331
Query: 290 ------------IHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGA 337
H S+ H+ G PE L + VG +IGK GA
Sbjct: 332 GAPPAAPYHPFATHSGYFSSLYPHHQFGPFPHHHSYPEQEVVNLFIPTQAVGAIIGKKGA 391
Query: 338 IIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPD 396
I+ L + G IK+ A +R+++I+GP +A + Q RI + +
Sbjct: 392 HIKQLARFAGASIKIAPAEGPDVSERMVIITGPP----------EAQFKAQGRIFGKLKE 441
Query: 397 NR------EQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASEN 450
+ E + + V S+ G ++GKGG + E++ L+ A + I+ +DQ P EN
Sbjct: 442 EKFFTPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP---DEN 497
Query: 451 EEVVL-INGEFEAVQEALFQI 470
EEV++ I G F A Q A +I
Sbjct: 498 EEVIVRIIGHFFASQTAQRKI 518
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 141/343 (41%), Gaps = 55/343 (16%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV-MEAVSGTEDRLIVISGPAHPDDRIS 377
R+L + VG +IGK G I+++ ++T + + + SG ++ + I A P+
Sbjct: 139 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIH--ATPEGTSE 196
Query: 378 APQDAVLRV------QTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLS 431
A + +L + +T++A IP ++L + +G L+GK G + ++ +
Sbjct: 197 ACR-MILEIMQKEADETKLAEEIP--------LKILAHNGLVGRLIGKEGRNLKKIEHET 247
Query: 432 GAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLN 491
G I I + E + + G EA A +I +LR F D ++N+ N
Sbjct: 248 GTKITISSLQDL--SIYNPERTITVKGTVEACASAEIEIMKKLREAFENDML-AVNQQAN 304
Query: 492 PTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHI 551
I LS G++S G PP +HP HS + +
Sbjct: 305 ------------LIPGLNLSALGIFSTGLSVLSPPAGPRGAPPAAPYHPFATHSGYFSSL 352
Query: 552 HRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRR-VPVVVPRSLVPIIQGEDGAC 610
+ PH +GP FP P + V + +P V I G+ GA
Sbjct: 353 Y-----PH----HQFGP-----------FPHHHSYPEQEVVNLFIPTQAVGAIIGKKGAH 392
Query: 611 LKQIRQISDAKITITDPK-PGATETVIIISGTPEQTHAAQSLI 652
+KQ+ + + A I I + P +E ++II+G PE AQ I
Sbjct: 393 IKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI 435
>gi|393220213|gb|EJD05699.1| hypothetical protein FOMMEDRAFT_79532 [Fomitiporia mediterranea
MF3/22]
Length = 281
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 86/178 (48%), Gaps = 22/178 (12%)
Query: 312 PSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA-VSGTEDRLIVISGPA 370
P +T + + + R+G +IGK GA I+ ++ +G + E + G+ +R++ ++G A
Sbjct: 80 PGSRAVTIKFMIPNSRMGSIIGKQGAKIKEIQDASGARLNASEGMLPGSTERVLSVAGVA 139
Query: 371 HP---------------DDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGC 415
+R+ + ++ R R R Q+ ++ + ++ +GC
Sbjct: 140 DAIHIATYYVGNILIECQERMPSSTNSSYRPSNRAPRPPLSGGAQSYTQQIYIPNDLVGC 199
Query: 416 LLGKGGSIIAEMRKLSGAYIRILGKDQI------PKCASENEEVVLINGEFEAVQEAL 467
++GKGGS I E+R +S + I+I+ P +ENE +V+I G+ +Q A+
Sbjct: 200 IIGKGGSKINEIRHMSASQIKIMEPGVTPPGMSGPAGGTENERLVIITGQPHNIQMAV 257
Score = 45.8 bits (107), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 78/167 (46%), Gaps = 22/167 (13%)
Query: 316 ILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDR 375
++ R L + +IG+ G + +++++G + V E++ G +R++ +SGP
Sbjct: 1 MIHMRCLIVTQDASIIIGRAGKHVNEIREKSGARVVVSESIPGNPERILNVSGPL----- 55
Query: 376 ISAPQDAVLRVQTRIARAIPDN--------REQTVMTRLLVASNQIGCLLGKGGSIIAEM 427
DAV + I R I D + V + ++ ++++G ++GK G+ I E+
Sbjct: 56 -----DAVSKAFGLIVRRINDEPFDVPSVPGSRAVTIKFMIPNSRMGSIIGKQGAKIKEI 110
Query: 428 RKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRL 474
+ SGA + + +P E V+ + G +A+ A + + L
Sbjct: 111 QDASGARLN-ASEGMLP---GSTERVLSVAGVADAIHIATYYVGNIL 153
>gi|34364924|emb|CAE45883.1| hypothetical protein [Homo sapiens]
Length = 198
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 94/203 (46%), Gaps = 35/203 (17%)
Query: 294 MPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVM 353
M P P+F +S E T L VG +IGK G I+ L + G IK+
Sbjct: 12 MTPPYPQFEQS----------ETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIA 61
Query: 354 EAVS-GTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPD------NREQTVMTRL 406
A + + R+++I+GP +A + Q RI I + E + +
Sbjct: 62 PAEAPDAKVRMVIITGPP----------EAQFKAQGRIYGKIKEENFVSPKEEVKLEAHI 111
Query: 407 LVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVL-INGEFEAVQE 465
V S G ++GKGG + E++ LS A + ++ +DQ P EN++VV+ I G F A Q
Sbjct: 112 RVPSFAAGRVIGKGGKTVNELQNLSSAEV-VVPRDQTP---DENDQVVVKITGHFYACQV 167
Query: 466 A---LFQITTRLRHHFFRDAFPS 485
A + +I T+++ H + A S
Sbjct: 168 AQRKIQEILTQVKQHQQQKALQS 190
>gi|256079872|ref|XP_002576208.1| rna-binding protein related [Schistosoma mansoni]
gi|353231011|emb|CCD77429.1| rna-binding protein related [Schistosoma mansoni]
Length = 666
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 124/281 (44%), Gaps = 59/281 (20%)
Query: 311 KPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS---GTEDRLIVIS 367
KP+ + F++L G +IGKGG I ++ +T +K+ +A + GT +R+ +I
Sbjct: 37 KPAKGNVHFKILVPSIAAGAIIGKGGEAITEIQNQTSAKVKMSKANAFYPGTTERVCLIV 96
Query: 368 GPAHPDDRISAPQDAVLRVQTRIARAIPDNREQT--------VMT------RLLVASNQI 413
G +++LRV I+ I + E V+T ++LV ++
Sbjct: 97 GTI----------ESILRVFQYISEKIYEKPESVPKTGCEGRVLTERHKQVKILVPNSTA 146
Query: 414 GCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTR 473
G ++GKGGS I E++ +G +I++ K + A E V + GE ++A+ I ++
Sbjct: 147 GMIIGKGGSFIKELKDTTGVFIQVSQKSKELNLA---ERCVTVAGELSQTRDAIALILSK 203
Query: 474 LRHHFFRDAFPSINR-----PLNPTFLDQVSPFPSFIGRR-ELSPPGMYSNFGPSFHKFD 527
+ + P+I+ P+ + SP+ +G L GM FG H F
Sbjct: 204 IAEDPQSSSCPNISYSEIIGPVASAY-PTGSPYALAVGSHPGLPACGM--GFGSDMH-FR 259
Query: 528 AVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGP 568
A PGS +S+F +PPH+ + P P
Sbjct: 260 AA-----PGS------NSSF--------LPPHINSLSPVSP 281
>gi|90086375|dbj|BAE91740.1| unnamed protein product [Macaca fascicularis]
Length = 283
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 112/276 (40%), Gaps = 41/276 (14%)
Query: 402 VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFE 461
V RL+V + Q G L+GKGG I E+R+ +GA +++ G D +P + E + I G +
Sbjct: 25 VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAG-DMLP---NSTERAITIAGVPQ 80
Query: 462 AVQEALFQITTRLRHHFFRDAFPSI-NRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNF- 519
+V E + QI + + + P P + SP G+ S Y +
Sbjct: 81 SVTECVKQICLVMLETLSQSPQGRVMTIPYQP--MPASSPVICAGGQDRCSDAAGYPHAT 138
Query: 520 ----GPSFHKFDAVGGPPPPGSFHPHD-----------DHSAFMHH-IHRPGMPPHMPDM 563
GP + G + P D H A MH G+ P++
Sbjct: 139 HDLEGPPLDAYSIQG----QHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEV 194
Query: 564 KPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKIT 623
K + + + +P +L+ I G GA + +IRQ+S A+I
Sbjct: 195 KGY-------------WASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIK 241
Query: 624 ITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
I +P G++ + I+G+ AQ LI A + SE
Sbjct: 242 IANPVEGSSGRQVTITGSAASISLAQYLINARLSSE 277
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 97/239 (40%), Gaps = 58/239 (24%)
Query: 187 FVLRLLVLSTQVGCLLGKGGCVIKQI------------DKLPTCALASDEVVQITGEVDT 234
LRL+V +TQ G L+GKGGC IK+I D LP +++ + I G +
Sbjct: 25 VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPN---STERAITIAGVPQS 81
Query: 235 VRKALK---LISHQLLDNSPRDH-ESIPGNPTGPSHPL-----PDHSVSSQGAPYAT--- 282
V + +K L+ + L SP+ +IP P S P+ D + G P+AT
Sbjct: 82 VTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHATHDL 141
Query: 283 -----GHRDVADIHLPMPPSIPKFHE--------------SGVLDRPKPSPEI------- 316
+ H P + K ++ +G SPE+
Sbjct: 142 EGPPLDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASL 201
Query: 317 -----LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPA 370
T L + +G +IG+ GA I ++Q +G IK+ V G+ R + I+G A
Sbjct: 202 DASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSA 260
>gi|358400710|gb|EHK50036.1| hypothetical protein TRIATDRAFT_51252 [Trichoderma atroviride IMI
206040]
Length = 477
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 147/363 (40%), Gaps = 62/363 (17%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
+ R + +IGKGG + ++++ + V + G +R++ +SG
Sbjct: 118 IHIRAVISSPEAATIIGKGGENVSNIRKMSNAKCTVSDYQKGAVERILTVSGIV------ 171
Query: 377 SAPQDAVLRVQTRIARAIPDN--------REQTVMTRLLVASNQIGCLLGKGGSIIAEMR 428
DAV + I R + + +T RLL+ IG ++GKGGS I E++
Sbjct: 172 ----DAVAKAFGLIIRTLNNEPLSEASTASSKTYPLRLLIPHILIGSIIGKGGSRIREIQ 227
Query: 429 KLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHF---------- 478
+ SGA R+ D +SE VV+ G +AV A + + + L
Sbjct: 228 EASGA--RLNASDSCLPMSSERSLVVM--GVADAVHIATYYVGSTLLEQLNERFGGPGAS 283
Query: 479 ---FRDAFPSINRPLNPTFLDQVSPFPS--FIGR-------RELSPPGMYSNFGPSFHKF 526
R P + P + SP P+ GR +E P M P +
Sbjct: 284 AYATRSGAPVGSIPGGMQVVP-YSPQPASGHYGRAENYGRHQERRPHHMPPAPYPQPYAH 342
Query: 527 DAVGGPPP----PGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPD 582
A G P G+ P + A H+ +P M PH GPQ G P G P
Sbjct: 343 GAPHGAPAIPMQYGAGQP-AAYGAAAPHV-QPHMAPHT------GPQAH---GAPQGQPM 391
Query: 583 FVGPPHRRVP--VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISG 640
G P + + +P +V I G+ G + +IRQ+S + I I +P+ + E ++ I+G
Sbjct: 392 HAGMPGGPITQQIYIPNDMVGAIIGKGGQKINEIRQMSGSVIKINEPQDNSNERLVTITG 451
Query: 641 TPE 643
T E
Sbjct: 452 TEE 454
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 44/73 (60%), Gaps = 5/73 (6%)
Query: 402 VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFE 461
+ ++ + ++ +G ++GKGG I E+R++SG+ I+I P+ S NE +V I G E
Sbjct: 400 ITQQIYIPNDMVGAIIGKGGQKINEIRQMSGSVIKI----NEPQDNS-NERLVTITGTEE 454
Query: 462 AVQEALFQITTRL 474
+ AL+ + +RL
Sbjct: 455 CNRMALYMLYSRL 467
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 42 FPGG-IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASD 99
PGG I ++ P + +IGK G+ +++I Q +G I++ E S+ERLV I ++
Sbjct: 395 MPGGPITQQIYIPNDMVGAIIGKGGQKINEIRQMSGSVIKINEPQDNSNERLVTITGTE 453
>gi|332215029|ref|XP_003256639.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 2 [Nomascus leucogenys]
Length = 536
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 111/501 (22%), Positives = 198/501 (39%), Gaps = 126/501 (25%)
Query: 14 DDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIM--------FRVLCPVSKIDGVIGKDG 65
D+ + P+ +++Q+ GD+S + + PGG R+L P + +IGK+G
Sbjct: 94 DEEVSSPSPPQRAQR--GDHSSREQGHA-PGGTSQARQIDFPLRILVPTQFVGAIIGKEG 150
Query: 66 EMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASV 125
+ I++ T + I R EN+G E V
Sbjct: 151 LTIKNITKQTQSRV-------------------------------DIHRKENSGAAEKPV 179
Query: 126 ADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSS 185
+ EG+ +A ++ E M + ET++A++
Sbjct: 180 TIHA-------TPEGT---------------SEACRMILEIMQKEADETKLAEE------ 211
Query: 186 KFVLRLLVLSTQVGCLLGKGGCVIKQID-----KLPTCALAS------DEVVQITGEVDT 234
L++L + VG L+GK G +K+I+ K+ +L + + + G V+
Sbjct: 212 -IPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEA 270
Query: 235 VRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVAD----- 289
A I +L + D ++ ++ +P ++S+ G ++TG ++
Sbjct: 271 CASAEIEIMKKLREAFENDMLAV----NQQANLIPGLNLSALGI-FSTGLSVLSPPAGPR 325
Query: 290 ------------IHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGA 337
H S+ H+ G PE L + VG +IGK GA
Sbjct: 326 GAPPAAPYHPFATHSGYFSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGA 385
Query: 338 IIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPD 396
I+ L + G IK+ A +R+++I+GP +A + Q RI + +
Sbjct: 386 HIKQLARFAGASIKIAPAEGPDVSERMVIITGPP----------EAQFKAQGRIFGKLKE 435
Query: 397 ------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASEN 450
E + + V S+ G ++GKGG + E++ L+ A + I+ +DQ P EN
Sbjct: 436 ENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP---DEN 491
Query: 451 EEVVL-INGEFEAVQEALFQI 470
EEV++ I G F A Q A +I
Sbjct: 492 EEVIVRIIGHFFASQTAQRKI 512
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 141/343 (41%), Gaps = 55/343 (16%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV-MEAVSGTEDRLIVISGPAHPDDRIS 377
R+L + VG +IGK G I+++ ++T + + + SG ++ + I A P+
Sbjct: 133 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIH--ATPEGTSE 190
Query: 378 APQDAVLRV------QTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLS 431
A + +L + +T++A IP ++L + +G L+GK G + ++ +
Sbjct: 191 ACR-MILEIMQKEADETKLAEEIP--------LKILAHNGLVGRLIGKEGRNLKKIEHET 241
Query: 432 GAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLN 491
G I I + E + + G EA A +I +LR F D ++N+ N
Sbjct: 242 GTKITISSLQDL--SIYNPERTITVKGTVEACASAEIEIMKKLREAFENDML-AVNQQAN 298
Query: 492 PTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHI 551
I LS G++S G PP +HP HS + +
Sbjct: 299 ------------LIPGLNLSALGIFSTGLSVLSPPAGPRGAPPAAPYHPFATHSGYFSSL 346
Query: 552 HRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRR-VPVVVPRSLVPIIQGEDGAC 610
+ PH +GP FP P + V + +P V I G+ GA
Sbjct: 347 Y-----PH----HQFGP-----------FPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAH 386
Query: 611 LKQIRQISDAKITITDPK-PGATETVIIISGTPEQTHAAQSLI 652
+KQ+ + + A I I + P +E ++II+G PE AQ I
Sbjct: 387 IKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI 429
>gi|194741910|ref|XP_001953430.1| GF17214 [Drosophila ananassae]
gi|190626489|gb|EDV42013.1| GF17214 [Drosophila ananassae]
Length = 532
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 90/187 (48%), Gaps = 23/187 (12%)
Query: 329 GGVIGKGGAIIRSLKQETGCDIKVMEA---VSGTEDRLIVISGPAHP--------DDRIS 377
G +IGKGG I SL+++TG +K+ ++ GT +R+ +I+G D+I
Sbjct: 78 GAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMFVLDFIMDKIR 137
Query: 378 APQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRI 437
D ++ I +E+ ++LV ++ G ++GKGG+ I ++++ SG+Y++I
Sbjct: 138 EKPDLTTKI---IDAESKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQI 194
Query: 438 LGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQ 497
Q PK S E + I G+ E + A I +++ P LN ++ D
Sbjct: 195 ---SQKPKDVSLQERCITIIGDKENNKNACKMILSKIVED------PQSGTCLNVSYADV 245
Query: 498 VSPFPSF 504
P +F
Sbjct: 246 SGPVANF 252
>gi|402587695|gb|EJW81630.1| KH domain-containing protein [Wuchereria bancrofti]
Length = 273
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 111/258 (43%), Gaps = 48/258 (18%)
Query: 405 RLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASEN-EEVVLINGEFEAV 463
++LV + G ++G+GGS I E+R+ +GA +++ +CA ++ E +VL+NGE E +
Sbjct: 49 KVLVHESHAGAVIGRGGSRIKELREKTGAQLKVF-----SRCAPQSTERIVLLNGEVEKI 103
Query: 464 QEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQ--VSPFPSFI-GRRELSPPGMYSNFG 520
+ + I L+ + RP +P + D +S + ++ R +S G +FG
Sbjct: 104 IDCINIIIDVLKEIPIKGPV----RPYDPMYYDPDIISDYGGYVPDRNFISRVGRGRDFG 159
Query: 521 PSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGF 580
S P + DD GM M P
Sbjct: 160 FSSGII--------PSRYPGRDDRYG--------GMRDMMGRYSPI-------------- 189
Query: 581 PDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISG 640
P + V +P L I G+ G+ + ++R+ S A+I + + + +I ISG
Sbjct: 190 -----PAMQTTQVTIPDELGGAIIGKGGSRINRVREESGAQIEVEPHRDNGGDRIITISG 244
Query: 641 TPEQTHAAQSLIQAFVMS 658
T EQ AAQ L+Q V +
Sbjct: 245 TREQIQAAQYLLQQCVRT 262
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 96/239 (40%), Gaps = 29/239 (12%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIK-- 210
T + L + R+ E + + T +++LV + G ++G+GG IK
Sbjct: 12 TENIANCLREIIPRLDENRDDDHDRRMKKTDRCDSEMKVLVHESHAGAVIGRGGSRIKEL 71
Query: 211 ------QIDKLPTCALASDE-VVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTG 263
Q+ CA S E +V + GEV+ + + +I L + + P P
Sbjct: 72 REKTGAQLKVFSRCAPQSTERIVLLNGEVEKIIDCINIIIDVLKEIPIKG----PVRPYD 127
Query: 264 PSHPLPDHSVSSQGAPYATGH---------RDVADIHLPMPPSIPKFHES-----GVLDR 309
P + PD + S Y RD +P P + ++ R
Sbjct: 128 PMYYDPD--IISDYGGYVPDRNFISRVGRGRDFGFSSGIIPSRYPGRDDRYGGMRDMMGR 185
Query: 310 PKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
P P + T ++ DE G +IGKGG+ I +++E+G I+V DR+I ISG
Sbjct: 186 YSPIPAMQTTQVTIPDELGGAIIGKGGSRINRVREESGAQIEVEPHRDNGGDRIITISG 244
>gi|391338059|ref|XP_003743379.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Metaseiulus occidentalis]
Length = 707
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 117/281 (41%), Gaps = 47/281 (16%)
Query: 312 PSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA------VSGTEDRLIV 365
P P+ L R+L E VG +IGK GA I S+ Q++ ++V + G D++I
Sbjct: 190 PPPKELPVRMLVPSEMVGAIIGKSGATITSITQQSQAKVEVNKKNAGGIFADGQVDKVIN 249
Query: 366 ISGPAHPDDRISAPQDAVLRVQTRIARAIPDN---------REQTVMTRLLVASNQIGCL 416
I G ++ S +L V + ++ N R++ + RLL +N +G +
Sbjct: 250 IHG---TNEACSQACKRILEVMLQESQQPATNTMNGGTSRRRDEPITLRLLAHNNLVGRV 306
Query: 417 LGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRH 476
+G+ G +I ++ + + A I + + E V++I G E + +A QIT+++R
Sbjct: 307 IGRSGIVIKKIMEETNAKI------NVSQMTDPRERVIVIRGNLEEMSKAQQQITSKMRQ 360
Query: 477 HFFRDAFPSINRPLNPTFL----DQVSPFPSF-------------------IGRRELSPP 513
+ +D ++ L Q+ P S+ P
Sbjct: 361 CYEQDLQQAMMGGYGGPDLGPPPQQIPPALSYPFHRPPLPPPPPITHPYHGGPNGHHGGP 420
Query: 514 GMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRP 554
S+FGP + +G P G F+P D S + H+ P
Sbjct: 421 HHPSSFGPPGGPYGRIGMSSPSGHFYPMGDGSVEVAHVWVP 461
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 85/202 (42%), Gaps = 60/202 (29%)
Query: 328 VGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIV---------------------- 365
VG +IG GG+ IR + + +GC IKV + + E + +
Sbjct: 465 VGAIIGTGGSSIREMIRASGCSIKVSQTNAKDEKKTKIDESVAKQNGSENPGDSPSSSSV 524
Query: 366 --------------ISGPAHPDDR---ISAPQDAVLRVQTRIARAI-------------- 394
++ +P DR ++ +A + Q + R +
Sbjct: 525 ATEGGHSTKRDGGSVASLPNPSDRRVTVTGSGEAQWKAQCLLYRKVFMEAVQHLDLNPDV 584
Query: 395 ---PDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENE 451
P ++ + + V SNQ+G ++G+GGS + +M++ SGA I+ L ++ + S +E
Sbjct: 585 SNDPQIQQGHLRIEINVPSNQVGRIIGRGGSTVKDMQRQSGAIIK-LPEETSRRAGSPDE 643
Query: 452 EV---VLINGEFEAVQEALFQI 470
V + I G+F AVQ A +I
Sbjct: 644 AVETPLYIIGDFYAVQAAQRRI 665
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 102/238 (42%), Gaps = 42/238 (17%)
Query: 50 VLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSEN-- 107
V P + +IG G + ++ + +G +I+V +T + DE+ I+ S K+ SEN
Sbjct: 458 VWVPSCTVGAIIGTGGSSIREMIRASGCSIKVSQT-NAKDEKKTKIDESVAKQNGSENPG 516
Query: 108 -----LEASIERSENNGREEASVA---DESDNKKEDSVNEGSVLMDGLNSEKETSKVQKA 159
+ E + R+ SVA + SD + +V G K + +
Sbjct: 517 DSPSSSSVATEGGHSTKRDGGSVASLPNPSDRRV-------TVTGSGEAQWKAQCLLYRK 569
Query: 160 LLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQ-------I 212
+ + + +++ P+ V++ + + + V S QVG ++G+GG +K I
Sbjct: 570 VFMEAVQHLDLNPD--VSNDPQIQQGHLRIEINVPSNQVGRIIGRGGSTVKDMQRQSGAI 627
Query: 213 DKLP----TCALASDEVVQ----ITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPT 262
KLP A + DE V+ I G+ V+ A + I L+ +P PG PT
Sbjct: 628 IKLPEETSRRAGSPDEAVETPLYIIGDFYAVQAAQRRI-RALIARTP------PGGPT 678
>gi|390479167|ref|XP_002762342.2| PREDICTED: RNA-binding protein Nova-2-like [Callithrix jacchus]
Length = 608
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 90/176 (51%), Gaps = 28/176 (15%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA---VSGTEDRLIVISGPAHPDDR 375
++L G +IGKGG I L++ETG IK+ ++ GT +R+ ++ G A +
Sbjct: 132 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 191
Query: 376 ISA---------PQDA-------VLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGK 419
+ + PQ +L+ QT + PD +Q +L+V ++ G ++GK
Sbjct: 192 VHSFIAEKVREIPQAMTKPEVVNILQPQTTMN---PDRAKQA---KLIVPNSTAGLIIGK 245
Query: 420 GGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLR 475
GG+ + + + SGA++++ Q P+ + E VV ++GE E V +A+ I +++
Sbjct: 246 GGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 298
Score = 40.0 bits (92), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 591 VPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPK---PGATETVIIISGTPEQTHA 647
V + VP +LV I G+ G L + ++++ A+I I+ PG + I+G+P T A
Sbjct: 506 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPTNTQA 565
Query: 648 AQSLIQAFVM 657
AQ LI V
Sbjct: 566 AQYLISQRVF 575
>gi|226485617|emb|CAX75228.1| Heterogeneous nuclear ribonucleoprotein K [Schistosoma japonicum]
Length = 297
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 122/298 (40%), Gaps = 43/298 (14%)
Query: 394 IPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEV 453
+ +NR++ V RLLV +Q GC++G+GG I E+R+ SG + L Q+ C S + V
Sbjct: 1 MQNNRDEGVDLRLLVHYSQAGCVIGRGGYKIKELREQSG--LHTLKVYQML-CPSSTDRV 57
Query: 454 VLINGEFEAVQEALFQITTRL--------RHHF-FRDAFPSINRPLNPTFL-DQVSPFPS 503
+ + G+ V L I L R ++ R+ + I+ L +Q S
Sbjct: 58 IQLVGDVGKVLNCLQSIAELLEGAPPKGSRQNYDARNVYEFISLEYGGWGLGNQGSGLNM 117
Query: 504 FIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDM 563
GR ++ +N+ + + G G+ + +A ++ G+P H
Sbjct: 118 IRGRSNVAN----TNYSQNNILTTGIFGGGASGAAGRNGGQTASVNQALAGGLP-HASAA 172
Query: 564 KPWGPQGLMEVGGP---------------------MGFPDFVG----PPHRRVPVVVPRS 598
G GGP G P+ + P V V
Sbjct: 173 AMLAATGGQTTGGPNTGPARDAAATAAAMVAAGFMRGLPNRMAMSLLTPTTSTQVSVSNK 232
Query: 599 LVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFV 656
++ I G G + Q+R S+A I I+ +PG + +I I+GTPEQ AQ L+Q V
Sbjct: 233 MIGAIMGRSGCRINQVRHESNADIKISKLEPGVEDRIITITGTPEQIQNAQFLLQMCV 290
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 11/82 (13%)
Query: 180 ENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDK---LPT-------CALASDEVVQIT 229
+N + LRLLV +Q GC++G+GG IK++ + L T C ++D V+Q+
Sbjct: 2 QNNRDEGVDLRLLVHYSQAGCVIGRGGYKIKELREQSGLHTLKVYQMLCPSSTDRVIQLV 61
Query: 230 GEVDTVRKALKLISHQLLDNSP 251
G+V V L+ I+ +LL+ +P
Sbjct: 62 GDVGKVLNCLQSIA-ELLEGAP 82
>gi|402860703|ref|XP_003894762.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 3 [Papio anubis]
Length = 536
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 111/501 (22%), Positives = 198/501 (39%), Gaps = 126/501 (25%)
Query: 14 DDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIM--------FRVLCPVSKIDGVIGKDG 65
D+ + P+ +++Q+ GD+S + + PGG R+L P + +IGK+G
Sbjct: 94 DEEVSSPSPPQRAQR--GDHSSREQGHA-PGGTSQARQIDFPLRILVPTQFVGAIIGKEG 150
Query: 66 EMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASV 125
+ I++ T + I R EN+G E V
Sbjct: 151 LTIKNITKQTQSRV-------------------------------DIHRKENSGAAEKPV 179
Query: 126 ADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSS 185
+ EG+ +A ++ E M + ET++A++
Sbjct: 180 TIHA-------TPEGT---------------SEACRMILEIMQKEADETKLAEE------ 211
Query: 186 KFVLRLLVLSTQVGCLLGKGGCVIKQID-----KLPTCALAS------DEVVQITGEVDT 234
L++L + VG L+GK G +K+I+ K+ +L + + + G V+
Sbjct: 212 -IPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEA 270
Query: 235 VRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVAD----- 289
A I +L + D ++ ++ +P ++S+ G ++TG ++
Sbjct: 271 CASAEIEIMKKLREAFENDMLAV----NQQANLIPGLNLSALGI-FSTGLSVLSPPAGPR 325
Query: 290 ------------IHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGA 337
H S+ H+ G PE L + VG +IGK GA
Sbjct: 326 GAPPAAPYHPFATHSGYFSSLYPHHQFGPFPHHHSYPEQEVVNLFIPTQAVGAIIGKKGA 385
Query: 338 IIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPD 396
I+ L + G IK+ A +R+++I+GP +A + Q RI + +
Sbjct: 386 HIKQLARFAGASIKIAPAEGPDVSERMVIITGPP----------EAQFKAQGRIFGKLKE 435
Query: 397 ------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASEN 450
E + + V S+ G ++GKGG + E++ L+ A + I+ +DQ P EN
Sbjct: 436 ENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP---DEN 491
Query: 451 EEVVL-INGEFEAVQEALFQI 470
EEV++ I G F A Q A +I
Sbjct: 492 EEVIVRIIGHFFASQTAQRKI 512
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 141/343 (41%), Gaps = 55/343 (16%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV-MEAVSGTEDRLIVISGPAHPDDRIS 377
R+L + VG +IGK G I+++ ++T + + + SG ++ + I A P+
Sbjct: 133 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIH--ATPEGTSE 190
Query: 378 APQDAVLRV------QTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLS 431
A + +L + +T++A IP ++L + +G L+GK G + ++ +
Sbjct: 191 ACR-MILEIMQKEADETKLAEEIP--------LKILAHNGLVGRLIGKEGRNLKKIEHET 241
Query: 432 GAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLN 491
G I I + E + + G EA A +I +LR F D ++N+ N
Sbjct: 242 GTKITISSLQDL--SIYNPERTITVKGTVEACASAEIEIMKKLREAFENDML-AVNQQAN 298
Query: 492 PTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHI 551
I LS G++S G PP +HP HS + +
Sbjct: 299 ------------LIPGLNLSALGIFSTGLSVLSPPAGPRGAPPAAPYHPFATHSGYFSSL 346
Query: 552 HRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRR-VPVVVPRSLVPIIQGEDGAC 610
+ PH +GP FP P + V + +P V I G+ GA
Sbjct: 347 Y-----PH----HQFGP-----------FPHHHSYPEQEVVNLFIPTQAVGAIIGKKGAH 386
Query: 611 LKQIRQISDAKITITDPK-PGATETVIIISGTPEQTHAAQSLI 652
+KQ+ + + A I I + P +E ++II+G PE AQ I
Sbjct: 387 IKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI 429
>gi|397470077|ref|XP_003806660.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 1 [Pan paniscus]
gi|179479906|gb|ACB86626.1| insulin-like 2 growth factor 2-binding protein 2 [Homo sapiens]
Length = 536
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 111/501 (22%), Positives = 198/501 (39%), Gaps = 126/501 (25%)
Query: 14 DDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIM--------FRVLCPVSKIDGVIGKDG 65
D+ + P+ +++Q+ GD+S + + PGG R+L P + +IGK+G
Sbjct: 94 DEEVSSPSPPQRAQR--GDHSSREQGHA-PGGTSQARQIDFPLRILVPTQFVGAIIGKEG 150
Query: 66 EMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASV 125
+ I++ T + I R EN+G E V
Sbjct: 151 LTIKNITKQTQSRV-------------------------------DIHRKENSGAAEKPV 179
Query: 126 ADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSS 185
+ EG+ +A ++ E M + ET++A++
Sbjct: 180 TIHA-------TPEGT---------------SEACRMILEIMQKEADETKLAEE------ 211
Query: 186 KFVLRLLVLSTQVGCLLGKGGCVIKQID-----KLPTCALAS------DEVVQITGEVDT 234
L++L + VG L+GK G +K+I+ K+ +L + + + G V+
Sbjct: 212 -IPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEA 270
Query: 235 VRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVA------ 288
A I +L + D ++ ++ +P ++S+ G ++TG ++
Sbjct: 271 CASAEIEIMKKLREAFENDMLAV----NQQANLIPGLNLSALGI-FSTGLSVLSPPAGPR 325
Query: 289 -----------DIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGA 337
H S+ H+ G PE L + VG +IGK GA
Sbjct: 326 GAPPAAPYHPFTTHSGYFSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGA 385
Query: 338 IIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPD 396
I+ L + G IK+ A +R+++I+GP +A + Q RI + +
Sbjct: 386 HIKQLARFAGASIKIAPAEGPDVSERMVIITGPP----------EAQFKAQGRIFGKLKE 435
Query: 397 ------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASEN 450
E + + V S+ G ++GKGG + E++ L+ A + I+ +DQ P EN
Sbjct: 436 ENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP---DEN 491
Query: 451 EEVVL-INGEFEAVQEALFQI 470
EEV++ I G F A Q A +I
Sbjct: 492 EEVIVRIIGHFFASQTAQRKI 512
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 141/343 (41%), Gaps = 55/343 (16%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV-MEAVSGTEDRLIVISGPAHPDDRIS 377
R+L + VG +IGK G I+++ ++T + + + SG ++ + I A P+
Sbjct: 133 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIH--ATPEGTSE 190
Query: 378 APQDAVLRV------QTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLS 431
A + +L + +T++A IP ++L + +G L+GK G + ++ +
Sbjct: 191 ACR-MILEIMQKEADETKLAEEIP--------LKILAHNGLVGRLIGKEGRNLKKIEHET 241
Query: 432 GAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLN 491
G I I + E + + G EA A +I +LR F D ++N+ N
Sbjct: 242 GTKITISSLQDL--SIYNPERTITVKGTVEACASAEIEIMKKLREAFENDML-AVNQQAN 298
Query: 492 PTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHI 551
I LS G++S G PP +HP HS + +
Sbjct: 299 ------------LIPGLNLSALGIFSTGLSVLSPPAGPRGAPPAAPYHPFTTHSGYFSSL 346
Query: 552 HRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRR-VPVVVPRSLVPIIQGEDGAC 610
+ PH +GP FP P + V + +P V I G+ GA
Sbjct: 347 Y-----PH----HQFGP-----------FPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAH 386
Query: 611 LKQIRQISDAKITITDPK-PGATETVIIISGTPEQTHAAQSLI 652
+KQ+ + + A I I + P +E ++II+G PE AQ I
Sbjct: 387 IKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI 429
>gi|386771593|ref|NP_730700.2| mushroom-body expressed, isoform G [Drosophila melanogaster]
gi|442634089|ref|NP_001262197.1| mushroom-body expressed, isoform M [Drosophila melanogaster]
gi|383292066|gb|AAN12194.2| mushroom-body expressed, isoform G [Drosophila melanogaster]
gi|440216174|gb|AGB94890.1| mushroom-body expressed, isoform M [Drosophila melanogaster]
Length = 359
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 79/160 (49%), Gaps = 22/160 (13%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RL+ + VG +IGK G I+ ++E+G I + + +R++ +SG
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDG--SCPERIVTVSGTT------ 75
Query: 377 SAPQDAVLRVQTRIARAIPDNRE------QTVMTRLLVASNQIGCLLGKGGSIIAEMRKL 430
+A+ T I + + + + RL+V ++Q G L+GK GS I E+R+
Sbjct: 76 ----NAIFSAFTLITKKFEEFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQT 131
Query: 431 SGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
+G I++ + +P + E V ++G E + + ++QI
Sbjct: 132 TGCSIQV-ASEMLP---NSTERAVTLSGSAEQITQCIYQI 167
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 52/87 (59%), Gaps = 2/87 (2%)
Query: 388 TRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCA 447
+++ A P NR Q + V+++ IGC++GKGG+ IAE+R++SGA IRI ++ +
Sbjct: 249 SQLRTANPANRAQQQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REG 306
Query: 448 SENEEVVLINGEFEAVQEALFQITTRL 474
+ + I+G ++V A + I R+
Sbjct: 307 GNTDRTITISGNPDSVALAQYLINMRI 333
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 100/235 (42%), Gaps = 39/235 (16%)
Query: 175 EVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKLPTCAL---------ASDEV 225
E D ++ +RL+V ++Q G L+GK G IK+I + C++ +++
Sbjct: 91 EFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPNSTERA 150
Query: 226 VQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNP----TGPSHPLPDHSVSSQGAPYA 281
V ++G + + + + I +L++ PR +IP P TGP + + QG YA
Sbjct: 151 VTLSGSAEQITQCIYQICLVMLESPPRG-ATIPYRPKPQVTGPVILANGQAFTIQGN-YA 208
Query: 282 TGHRDVAD----------IHLPMPPSIPKFHESGV---------LDRPKPSPEILTFRLL 322
++VA + P S + + + P + +
Sbjct: 209 VPTQEVAKNPLASLAALGLAGMNPASTGGINHTALAALAGSQLRTANPANRAQQQQHEMT 268
Query: 323 CHDERVGGVIGKGGAIIRSLKQETGCDIKVM---EAVSGTEDRLIVISGPAHPDD 374
++ +G +IGKGG I ++Q +G I++ E G DR I ISG +PD
Sbjct: 269 VSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISG--NPDS 321
>gi|17737727|ref|NP_524208.1| mushroom-body expressed, isoform A [Drosophila melanogaster]
gi|1770212|emb|CAA67719.1| nucleic acid binding protein [Drosophila melanogaster]
gi|7296507|gb|AAF51792.1| mushroom-body expressed, isoform A [Drosophila melanogaster]
Length = 386
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 79/164 (48%), Gaps = 26/164 (15%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RL+ + VG +IGK G I+ ++E+G I + + +R++ +SG
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDG--SCPERIVTVSGTT------ 75
Query: 377 SAPQDAVLRVQTRIARAIPDNREQ----------TVMTRLLVASNQIGCLLGKGGSIIAE 426
+A+ T I + + Q + RL+V ++Q G L+GK GS I E
Sbjct: 76 ----NAIFSAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKE 131
Query: 427 MRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
+R+ +G I++ + +P + E V ++G E + + ++QI
Sbjct: 132 IRQTTGCSIQV-ASEMLP---NSTERAVTLSGSAEQITQCIYQI 171
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 393 AIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEE 452
A P NR Q + V+++ IGC++GKGG+ IAE+R++SGA IRI ++ + +
Sbjct: 281 ANPANRAQQQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGNTDR 338
Query: 453 VVLINGEFEAVQEALFQITTRL 474
+ I+G ++V A + I R+
Sbjct: 339 TITISGNPDSVALAQYLINMRI 360
Score = 45.4 bits (106), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 111/280 (39%), Gaps = 64/280 (22%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI 212
T+ + A L+ ++ E ++ D ++ +RL+V ++Q G L+GK G IK+I
Sbjct: 75 TNAIFSAFTLITKKFEEWC--SQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEI 132
Query: 213 DKLPTCAL---------ASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNP-- 261
+ C++ +++ V ++G + + + + I +L++ PR +IP P
Sbjct: 133 RQTTGCSIQVASEMLPNSTERAVTLSGSAEQITQCIYQICLVMLESPPRG-ATIPYRPKP 191
Query: 262 --TGPSHPLPDHSVSSQGAPYATGHRDVAD----------IHLPMPPSIPKFHESGVLD- 308
TGP + + QG YA ++VA + P S + +G L
Sbjct: 192 QVTGPVILANGQAFTIQGN-YAVPTQEVAKNPLASLAALGLAGMNPASTGGINHTGELSA 250
Query: 309 -------------------------------RPKPSPEILTFRLLCHDERVGGVIGKGGA 337
P + + ++ +G +IGKGG
Sbjct: 251 SAARCQTDFQSNLGSAPAALAALAGSQLRTANPANRAQQQQHEMTVSNDLIGCIIGKGGT 310
Query: 338 IIRSLKQETGCDIKVM---EAVSGTEDRLIVISGPAHPDD 374
I ++Q +G I++ E G DR I ISG +PD
Sbjct: 311 KIAEIRQISGAMIRISNCEEREGGNTDRTITISG--NPDS 348
Score = 38.9 bits (89), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 593 VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKP---GATETVIIISGTPEQTHAAQ 649
+ V L+ I G+ G + +IRQIS A I I++ + G T+ I ISG P+ AQ
Sbjct: 294 MTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQ 353
Query: 650 SLIQAFVMSET 660
LI + ET
Sbjct: 354 YLINMRISMET 364
>gi|302697985|ref|XP_003038671.1| hypothetical protein SCHCODRAFT_80836 [Schizophyllum commune H4-8]
gi|300112368|gb|EFJ03769.1| hypothetical protein SCHCODRAFT_80836 [Schizophyllum commune H4-8]
Length = 308
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 98/208 (47%), Gaps = 19/208 (9%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
+ R L + G +IGKGG + L++ TG V + V G +R++ I+G P+
Sbjct: 1 MALRALVSTKDAGVIIGKGGKNVAELREVTGVKAGVSKVVPGVHERVLTINGS--PEGIA 58
Query: 377 SAPQDAVLRVQTRIARAIPDNREQTV------MTRLLVASNQIGCLLGKGGSIIAEMRKL 430
A Q + ++ + A + P+ V M RLLV+ N +G ++G+GG I ++
Sbjct: 59 KAYQHIIAQLVSASAGS-PELDASVVATNPHTMIRLLVSHNLMGTIIGRGGLKIKAIQDA 117
Query: 431 SGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPL 490
SGA + + KD +P+ E VV ++G + + A+++I+ L + R+ + P
Sbjct: 118 SGARL-VAQKDMLPQS---TERVVEVHGVPDEIGRAIYEISKSLLEDWERNTGTVLYHPQ 173
Query: 491 NPTFLDQVSPFPSFIG------RRELSP 512
+ PS G RR +SP
Sbjct: 174 AAEASGAAARRPSTNGFSPGARRRAISP 201
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 85/198 (42%), Gaps = 22/198 (11%)
Query: 188 VLRLLVLSTQVGCLLGKGGCVIKQIDKLPTCAL---------ASDEVVQITGEVDTVRKA 238
++RLLV +G ++G+GG IK I L +++ VV++ G D + +A
Sbjct: 90 MIRLLVSHNLMGTIIGRGGLKIKAIQDASGARLVAQKDMLPQSTERVVEVHGVPDEIGRA 149
Query: 239 LKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSI 298
+ IS LL++ R+ ++ +P S ++ G R A P S
Sbjct: 150 IYEISKSLLEDWERNTGTVLYHPQAAEASGAAARRPSTNG-FSPGARRRAISPTPSAGS- 207
Query: 299 PKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA-VS 357
+ P+ I T + + VG +IG+GG I +++ +G I + +A
Sbjct: 208 ----------QSTPNALIRTQNISIPSDMVGCIIGRGGTKITEIRRLSGSKISIAKAPHD 257
Query: 358 GTEDRLIVISGPAHPDDR 375
T +R+ I G +++
Sbjct: 258 ETGERMFTIVGSPEANEK 275
Score = 39.7 bits (91), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 410 SNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQ 469
S+ +GC++G+GG+ I E+R+LSG+ I I + P + E + I G EA ++AL+
Sbjct: 224 SDMVGCIIGRGGTKITEIRRLSGSKISIA---KAPHDET-GERMFTIVGSPEANEKALYL 279
Query: 470 ITTRL 474
+ +L
Sbjct: 280 LYNQL 284
>gi|417410720|gb|JAA51826.1| Putative polyc-binding alphacp-1, partial [Desmodus rotundus]
Length = 440
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 88/380 (23%), Positives = 156/380 (41%), Gaps = 71/380 (18%)
Query: 295 PPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVME 354
PP ++G+ + P+ S LT R+L + VG +IGK G ++ +++++ I + E
Sbjct: 34 PPGRMSSSDAGLEEEPELS-VTLTLRMLMQGKEVGSIIGKKGETVKRIREQSSARITISE 92
Query: 355 AVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAI-------PDNREQT----VM 403
+R+ I+G AV + IA + P N V
Sbjct: 93 G--SCPERITTITGSTA----------AVFHAVSMIAFKLDEDLCSAPANGGTVSRPPVT 140
Query: 404 TRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAV 463
RL++ ++Q G L+GK G+ I E+R+ +GA +++ G D +P + E V ++G +A+
Sbjct: 141 LRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAG-DLLP---NSTERAVTVSGVPDAI 196
Query: 464 QEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSF 523
+ QI + + A P +P+ +G LS +S G
Sbjct: 197 ILCVRQICAVILESPPKGA----TIPYHPSL---------SLGTVLLSANQGFSVQG--- 240
Query: 524 HKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDF 583
++ AV + + +P P M P ++ G +F
Sbjct: 241 -QYGAV-----------TPAEVTKLQQLSGHAVPFASPSMVPG-----LDPGAQTSSQEF 283
Query: 584 VGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPE 643
+ P L+ + G G+ + +IRQ+S A I I + GA E + I+G+P
Sbjct: 284 LVP----------NDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPV 333
Query: 644 QTHAAQSLIQAFVMSETETT 663
AQ LI A + + T+
Sbjct: 334 SIALAQYLITACLETAKSTS 353
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 90/195 (46%), Gaps = 20/195 (10%)
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQI------------DKLPTCALASDEVVQITGEVDTVR 236
LRL++ ++Q G L+GK G IK+I D LP +++ V ++G D +
Sbjct: 141 LRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPN---STERAVTVSGVPDAII 197
Query: 237 KALKLISHQLLDNSPRDHESIPGNPT---GPSHPLPDHSVSSQGAPYATGHRDVADIHLP 293
++ I +L++ P+ +IP +P+ G + S QG A +V +
Sbjct: 198 LCVRQICAVILESPPKG-ATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQL 256
Query: 294 MPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVM 353
++P F ++ P + + L ++ +G VIG+ G+ I ++Q +G IK+
Sbjct: 257 SGHAVP-FASPSMVPGLDPGAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIG 315
Query: 354 EAVSGTEDRLIVISG 368
G +R + I+G
Sbjct: 316 NQAEGAGERHVTITG 330
>gi|195606546|gb|ACG25103.1| hypothetical protein [Zea mays]
Length = 100
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 49/83 (59%)
Query: 576 GPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETV 635
GP+ + V P V++P + + + G +G+ +++I ++S A IT+ DPK G +
Sbjct: 13 GPVAIENQVATPTGTTEVIIPCNYIGFVCGNNGSEIEEIEKMSGASITVHDPKAGDANSK 72
Query: 636 IIISGTPEQTHAAQSLIQAFVMS 658
++I G PE+T AQSLI AF+
Sbjct: 73 VVICGDPEETKKAQSLIHAFIFC 95
>gi|395839829|ref|XP_003792778.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 3 [Otolemur garnettii]
Length = 575
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 103/443 (23%), Positives = 179/443 (40%), Gaps = 105/443 (23%)
Query: 48 FRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSEN 107
R+L P + +IGK+G + I++ T +
Sbjct: 194 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRV---------------------------- 225
Query: 108 LEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERM 167
I R EN+G E V + EG+ +A ++ E M
Sbjct: 226 ---DIHRKENSGAAEKPVTIHA-------TPEGT---------------SEACRMILEIM 260
Query: 168 VEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQID-----KLPTCALAS 222
+ ET++A++ L++L + VG L+GK G +K+I+ K+ +L
Sbjct: 261 QKEADETKLAEE-------IPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQD 313
Query: 223 ------DEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQ 276
+ + + G V+ A I +L + D ++ ++ +P ++S+
Sbjct: 314 LSIYNPERTITVKGTVEACANAEIEIMKKLREAFENDMLAV----NQQANLIPGLNLSAL 369
Query: 277 GAPYATGHRDVADIHLPMPPSIPKFHESGVLDRP-KPSPEILTFRLLCHDERVGGVIGKG 335
G ++TG + + PPS P+ P PE L + VG +IGK
Sbjct: 370 GI-FSTG------LSVLPPPSGPRGAPPAAPYHPFAQYPEQEIVNLFIPTQAVGAIIGKK 422
Query: 336 GAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAI 394
GA I+ L + G IK+ A +R+++I+GP +A + Q RI +
Sbjct: 423 GAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPP----------EAQFKAQGRIFGKL 472
Query: 395 PD------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCAS 448
+ E + + V S+ G ++GKGG + E++ L+ A + I+ +DQ P
Sbjct: 473 KEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP---D 528
Query: 449 ENEEVVL-INGEFEAVQEALFQI 470
ENEEV++ I G F A Q A +I
Sbjct: 529 ENEEVIVRIIGHFFASQTAQRKI 551
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 135/342 (39%), Gaps = 75/342 (21%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV-MEAVSGTEDRLIVISGPAHPDDRIS 377
R+L + VG +IGK G I+++ ++T + + + SG ++ + I A P+
Sbjct: 194 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIH--ATPEGTSE 251
Query: 378 APQDAVLRV------QTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLS 431
A + +L + +T++A IP ++L + +G L+GK G + ++ +
Sbjct: 252 ACR-MILEIMQKEADETKLAEEIP--------LKILAHNGLVGRLIGKEGRNLKKIEHET 302
Query: 432 GAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLN 491
G I I + E + + G EA A +I +LR F D ++N+ N
Sbjct: 303 GTKITISSLQDL--SIYNPERTITVKGTVEACANAEIEIMKKLREAFENDML-AVNQQAN 359
Query: 492 PTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHI 551
I LS G++S G S PPP G
Sbjct: 360 ------------LIPGLNLSALGIFST-GLSVL-------PPPSG--------------- 384
Query: 552 HRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACL 611
P P P+ P F + P V + +P V I G+ GA +
Sbjct: 385 -----PRGAPPAAPYHP-----------FAQY--PEQEIVNLFIPTQAVGAIIGKKGAHI 426
Query: 612 KQIRQISDAKITITDPK-PGATETVIIISGTPEQTHAAQSLI 652
KQ+ + + A I I + P +E ++II+G PE AQ I
Sbjct: 427 KQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI 468
>gi|308499839|ref|XP_003112105.1| hypothetical protein CRE_29640 [Caenorhabditis remanei]
gi|308268586|gb|EFP12539.1| hypothetical protein CRE_29640 [Caenorhabditis remanei]
Length = 721
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 153/377 (40%), Gaps = 74/377 (19%)
Query: 320 RLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAP 379
RLL + G +IGKGG I+ L+ E ++V + S T +R+ ++ A
Sbjct: 375 RLLVSSKSAGAIIGKGGENIKRLRAEFNAHVQVPD--SNTPERVCTVT----------AD 422
Query: 380 QDAVLRVQTRIARAIPDNREQT--VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRI 437
+ VL + + + DN + R+L+ + G L+G+ G+ I E+R+ A ++I
Sbjct: 423 EKTVLNILRDVLPRLEDNFSERDPCEVRMLIHQSHAGALIGRNGTKIKELREKCSARLKI 482
Query: 438 LGKDQIPKCA-SENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFL- 495
CA + V++ +GE + V + ++ L+ + + + P P+F
Sbjct: 483 F-----TGCAPGSTDRVLITSGEQKNVLAIIEEVMKELKEIPIKGS----STPYLPSFHY 533
Query: 496 --DQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFM----- 548
+S + F PG S+ GP ++ G PP G P ++
Sbjct: 534 DPSNISEYGGF--------PGNLSSGGPQ----NSRGPAPPRGGQGPAGGQRSYGGGAIT 581
Query: 549 ------------HHIHRPG-MPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVP--- 592
R G MP + + + PQ G G P G +
Sbjct: 582 PGGGPRSFESGDFQQFRGGPMPGYAMNAPGYAPQQ-----GQFGAPANAGYGYGPGGGGP 636
Query: 593 --------VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQ 644
V +P L I G G + +IRQ S A+IT+ +P G E +I I GT Q
Sbjct: 637 VTTAQVSFVTIPSDLGGTIIGRGGERIARIRQESGAQITL-EPSTGQPERIITIKGTEPQ 695
Query: 645 THAAQSLIQAFVMSETE 661
H+AQ L+Q V + T+
Sbjct: 696 IHSAQYLLQQCVRNSTQ 712
>gi|358368755|dbj|GAA85371.1| KH domain RNA-binding protein [Aspergillus kawachii IFO 4308]
Length = 360
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 89/191 (46%), Gaps = 12/191 (6%)
Query: 316 ILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDR 375
+LT R + + G +IGK G + L+ ETG V + V G DR++ ++GP + R
Sbjct: 42 MLTLRAIVSSKEAGIIIGKSGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTGPLNGTAR 101
Query: 376 ISAPQDAVLRV---QTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSG 432
A L Q + + +N V RLL++ NQ+G ++G+ G I ++ SG
Sbjct: 102 AYALVAKGLLEGAPQMGMGGIVSNNGTHPV--RLLISHNQMGTIIGRQGLKIKHIQDASG 159
Query: 433 AYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNP 492
+ + K+ +P+ E +V + G E +++A+++I L + R + NP
Sbjct: 160 VRM-VAQKEMLPQST---ERIVEVQGTPEGIEKAVWEIGKCLIDDWQRGTGTIL---YNP 212
Query: 493 TFLDQVSPFPS 503
V PS
Sbjct: 213 AVRASVGTTPS 223
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 146/352 (41%), Gaps = 64/352 (18%)
Query: 168 VEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI-DKLPTCALAS---- 222
+E P+TE E S LR +V S + G ++GK G + + D+ A S
Sbjct: 28 IETTPKTE----EEYAQSMLTLRAIVSSKEAGIIIGKSGKNVADLRDETGVKAGVSKVVP 83
Query: 223 ---DEVVQITGEVDTVRKALKLISHQLLDNSPRDHES--IPGNPTGPSHPLPDHS----- 272
D V+ +TG ++ +A L++ LL+ +P+ + N T P L H+
Sbjct: 84 GVHDRVLTVTGPLNGTARAYALVAKGLLEGAPQMGMGGIVSNNGTHPVRLLISHNQMGTI 143
Query: 273 VSSQGAPY-----ATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDER 327
+ QG A+G R VA + +P S + E + +PE + E+
Sbjct: 144 IGRQGLKIKHIQDASGVRMVAQKEM-LPQSTERIVEV------QGTPEGI--------EK 188
Query: 328 VGGVIGKGGAIIRSLKQETGCDIK--VMEAVSGTE------DRLIVISGPAHPDDRISAP 379
IGK +I ++ TG + + A GT ++ + + P +R
Sbjct: 189 AVWEIGK--CLIDDWQRGTGTILYNPAVRASVGTTPSTSTMNQSVGNGYNSRPYNRTGNG 246
Query: 380 QDAVLRVQTRIARAIPD--NR---------EQTVMTRLLVASNQIGCLLGKGGSIIAEMR 428
D + R+ PD NR E+ + + ++ +GC++G+GGS I E+R
Sbjct: 247 ADFSDQSGGYGRRSNPDTSNRGYPLVTEDGEEIQTQNISIPADMVGCIIGRGGSKITEIR 306
Query: 429 KLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFR 480
+ SGA I I + P + E + I G +A ++AL+ + L R
Sbjct: 307 RSSGARISIA---KAPHDET-GERMFTIMGSAQANEKALYLLYENLEAEKTR 354
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 106/240 (44%), Gaps = 23/240 (9%)
Query: 158 KALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKLPT 217
+A LV + ++E P+ + + + V RLL+ Q+G ++G+ G IK I
Sbjct: 101 RAYALVAKGLLEGAPQMGMGGIVSNNGTHPV-RLLISHNQMGTIIGRQGLKIKHIQDASG 159
Query: 218 CAL---------ASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNP------- 261
+ +++ +V++ G + + KA+ I L+D+ R +I NP
Sbjct: 160 VRMVAQKEMLPQSTERIVEVQGTPEGIEKAVWEIGKCLIDDWQRGTGTILYNPAVRASVG 219
Query: 262 TGPSHPLPDHSVSS--QGAPYA-TGH-RDVADIHLPMPP-SIPKFHESGVLDRPKPSPEI 316
T PS + SV + PY TG+ D +D S P G + EI
Sbjct: 220 TTPSTSTMNQSVGNGYNSRPYNRTGNGADFSDQSGGYGRRSNPDTSNRGYPLVTEDGEEI 279
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA-VSGTEDRLIVISGPAHPDDR 375
T + + VG +IG+GG+ I +++ +G I + +A T +R+ I G A +++
Sbjct: 280 QTQNISIPADMVGCIIGRGGSKITEIRRSSGARISIAKAPHDETGERMFTIMGSAQANEK 339
>gi|195481990|ref|XP_002101863.1| GE15370 [Drosophila yakuba]
gi|194189387|gb|EDX02971.1| GE15370 [Drosophila yakuba]
Length = 566
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 143/321 (44%), Gaps = 39/321 (12%)
Query: 175 EVADQE--NTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI----DKLPTCALASD----- 223
EV QE +T + L++L + +G ++GK G IK+I D T + +D
Sbjct: 145 EVMQQEALSTNKGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDINSFN 204
Query: 224 --EVVQITGEVDTVRKALKLISHQLLDNSPRDHESI-PGNPTGPS-HPLPDHSVSSQGAP 279
++ + G ++ + +A IS +L + D +++ P + P HP+ S G
Sbjct: 205 LERIITVKGLIENMSRAENQISTKLRQSYENDLQAMAPQSLMFPGLHPMAMMSTPGNGMV 264
Query: 280 YATGHRDVADIHLPMP-PSIPKFHES----GVLDRPKPSPEILTFRLLCHDERVGGVIGK 334
+ T MP PS F S V+ P+ T L + VG +IG
Sbjct: 265 FNTS----------MPFPSCQSFAMSKTPASVVPPVFPNDLQETTYLYIPNNAVGAIIGT 314
Query: 335 GGAIIRSLKQETGCDIKVM-----EAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTR 389
G+ IRS+ + + +K+ + + +R + I G P+ + A +++
Sbjct: 315 KGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGT--PEGQWKAQYMIFEKMREE 372
Query: 390 IARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASE 449
D+ TV LLVAS+Q+G ++GKGG + E+++++G+ I++ P +
Sbjct: 373 GFMCGTDDVRLTV--ELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLPEHALAPPSGGD 430
Query: 450 NEEVVLINGEFEAVQEALFQI 470
E V I G F +VQ A +I
Sbjct: 431 EETPVHIIGPFYSVQSAQRRI 451
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 136/342 (39%), Gaps = 65/342 (19%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRIS 377
R+L E VG +IG+ G+ IR++ Q++ + V + G+ ++ I I G +P++ +
Sbjct: 81 LRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENVGSLEKSITIYG--NPENCTN 138
Query: 378 APQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRI 437
A + + +Q A+ N+ + + ++L +N IG ++GK G+ I + + + I +
Sbjct: 139 ACKRILEVMQ---QEALSTNKGEICL-KILAHNNLIGRIIGKSGNTIKRIMQDTDTKITV 194
Query: 438 LGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQ 497
+ I + E ++ + G E + A QI+T+LR + D + + P L
Sbjct: 195 SSINDI--NSFNLERIITVKGLIENMSRAENQISTKLRQSYENDL-----QAMAPQSLM- 246
Query: 498 VSPFPSFIGRRELSPP--GMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPG 555
FP +S P GM N F + P S P
Sbjct: 247 ---FPGLHPMAMMSTPGNGMVFNTSMPFPSCQSFAMSKTPASVVP--------------- 288
Query: 556 MPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIR 615
P P L E + +P + V I G G+ ++ I
Sbjct: 289 ---------PVFPNDLQET----------------TYLYIPNNAVGAIIGTKGSHIRSIM 323
Query: 616 QISDAKITIT-----DPKPGATETVIIISGTPEQTHAAQSLI 652
+ S+A + I P TE + I GTPE AQ +I
Sbjct: 324 RFSNASLKIAPLDADKPLDQQTERKVTIVGTPEGQWKAQYMI 365
>gi|212542979|ref|XP_002151644.1| KH domain RNA-binding protein [Talaromyces marneffei ATCC 18224]
gi|210066551|gb|EEA20644.1| KH domain RNA-binding protein [Talaromyces marneffei ATCC 18224]
Length = 367
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 30/203 (14%)
Query: 303 ESGVL-DRPKPSPE----ILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS 357
ESG L D+PK E +LT R + + G +IGK G + L+ ETG V + V
Sbjct: 29 ESGELEDQPKTEEEYAQAVLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQ 88
Query: 358 GTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVM-----------TRL 406
G DR++ ++G R + +A+ + + Q M RL
Sbjct: 89 GVHDRVLTVTGGLQ----------GCARAYSIVAKGLLEGAPQVGMGGVVQNNGTHPIRL 138
Query: 407 LVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEA 466
L++ NQ+G ++G+ G I ++ SG + + K+ +P+ E +V + G E +++A
Sbjct: 139 LISHNQMGTIIGRQGLKIKHIQDASGVRM-VAQKEMLPQST---ERIVEVQGTPEGIEKA 194
Query: 467 LFQITTRLRHHFFRDAFPSINRP 489
+++I L + R + P
Sbjct: 195 VWEIGKCLIDDWQRGTGTVLYNP 217
Score = 45.8 bits (107), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 148/360 (41%), Gaps = 79/360 (21%)
Query: 168 VEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI-DKLPTCALAS---- 222
+E +P+TE E + LR +V S + G ++GK G + + D+ A S
Sbjct: 33 LEDQPKTE----EEYAQAVLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQ 88
Query: 223 ---DEVVQITGEVDTVRKALKLISHQLLDNSPRDHES--IPGNPTGPSHPLPDHS----- 272
D V+ +TG + +A +++ LL+ +P+ + N T P L H+
Sbjct: 89 GVHDRVLTVTGGLQGCARAYSIVAKGLLEGAPQVGMGGVVQNNGTHPIRLLISHNQMGTI 148
Query: 273 VSSQGAPY-----ATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDER 327
+ QG A+G R VA + +P S + E + +PE + E+
Sbjct: 149 IGRQGLKIKHIQDASGVRMVAQKEM-LPQSTERIVE------VQGTPEGI--------EK 193
Query: 328 VGGVIGKGGAIIRSLKQETGCDI---KVMEAVSGTEDRLIVISGPAHPDDR--------- 375
IGK +I ++ TG + V +V G+ P+H DR
Sbjct: 194 AVWEIGK--CLIDDWQRGTGTVLYNPAVRVSVGGSGQ-------PSHNGDRTGGSYGGGR 244
Query: 376 ----------ISAPQDAVLRVQT--RIARAIP---DNREQTVMTRLLVASNQIGCLLGKG 420
S P R + R+IP D+ E+ + + ++ +GC++G+G
Sbjct: 245 SYNRTGNGADFSEPSGGYNRRGSGDNANRSIPMVTDDGEEVQTQNISIPADMVGCIIGRG 304
Query: 421 GSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFR 480
GS I+E+R+ SGA I I + P + E + I G +A ++AL+ + L R
Sbjct: 305 GSKISEIRRSSGARISIA---KAPHDET-GERMFTIMGSAQANEKALYLLYENLEAEKMR 360
>gi|442634098|ref|NP_001262198.1| mushroom-body expressed, isoform L [Drosophila melanogaster]
gi|440216175|gb|AGB94891.1| mushroom-body expressed, isoform L [Drosophila melanogaster]
Length = 368
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 79/164 (48%), Gaps = 26/164 (15%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RL+ + VG +IGK G I+ ++E+G I + + +R++ +SG
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDG--SCPERIVTVSGTT------ 75
Query: 377 SAPQDAVLRVQTRIARAIPDNREQ----------TVMTRLLVASNQIGCLLGKGGSIIAE 426
+A+ T I + + Q + RL+V ++Q G L+GK GS I E
Sbjct: 76 ----NAIFSAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKE 131
Query: 427 MRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
+R+ +G I++ + +P + E V ++G E + + ++QI
Sbjct: 132 IRQTTGCSIQV-ASEMLP---NSTERAVTLSGSAEQITQCIYQI 171
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 52/87 (59%), Gaps = 2/87 (2%)
Query: 388 TRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCA 447
+++ A P NR Q + V+++ IGC++GKGG+ IAE+R++SGA IRI ++ +
Sbjct: 258 SQLRTANPANRAQQQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REG 315
Query: 448 SENEEVVLINGEFEAVQEALFQITTRL 474
+ + I+G ++V A + I R+
Sbjct: 316 GNTDRTITISGNPDSVALAQYLINMRI 342
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 115/279 (41%), Gaps = 46/279 (16%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI 212
T+ + A L+ ++ E ++ D ++ +RL+V ++Q G L+GK G IK+I
Sbjct: 75 TNAIFSAFTLITKKFEEWC--SQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEI 132
Query: 213 DKLPTCAL---------ASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNP-- 261
+ C++ +++ V ++G + + + + I +L++ PR +IP P
Sbjct: 133 RQTTGCSIQVASEMLPNSTERAVTLSGSAEQITQCIYQICLVMLESPPRG-ATIPYRPKP 191
Query: 262 --TGPSHPLPDHSVSSQGAPYATGHRDVAD----------IHLPMPPSIPKFHESGVLD- 308
TGP + + QG YA ++VA + P S + +G
Sbjct: 192 QVTGPVILANGQAFTIQGN-YAVPTQEVAKNPLASLAALGLAGMNPASTGGINHTGSAPA 250
Query: 309 -------------RPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVM-- 353
P + + ++ +G +IGKGG I ++Q +G I++
Sbjct: 251 ALAALAGSQLRTANPANRAQQQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNC 310
Query: 354 -EAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIA 391
E G DR I ISG +PD A +R+ A
Sbjct: 311 EEREGGNTDRTITISG--NPDSVALAQYLINMRISMETA 347
Score = 38.9 bits (89), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 593 VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKP---GATETVIIISGTPEQTHAAQ 649
+ V L+ I G+ G + +IRQIS A I I++ + G T+ I ISG P+ AQ
Sbjct: 276 MTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQ 335
Query: 650 SLIQAFVMSET 660
LI + ET
Sbjct: 336 YLINMRISMET 346
>gi|355733298|gb|AES10985.1| poly binding protein 2 [Mustela putorius furo]
Length = 148
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 74/126 (58%), Gaps = 7/126 (5%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 26 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTNAIFKA 83
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I+ ++ ++ + V RL+V ++Q G L+GKGG I E+R+ +GA
Sbjct: 84 FAM--IIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 141
Query: 434 YIRILG 439
+++ G
Sbjct: 142 QVQVAG 147
>gi|320034805|gb|EFW16748.1| KH domain RNA-binding protein [Coccidioides posadasii str.
Silveira]
Length = 345
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 89/194 (45%), Gaps = 9/194 (4%)
Query: 316 ILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDR 375
+LT R + + G +IGK G + L+ ETG V + V G DR++ ++GP +
Sbjct: 47 MLTLRAIVSTKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGPLQGTAK 106
Query: 376 ISAPQDAVLRV---QTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSG 432
L Q + I +N V RLL++ NQ+G ++G+ G I ++ SG
Sbjct: 107 AYGMVAKSLLEGAPQMGMGGIIQNNGTHPV--RLLISHNQMGTIIGRNGLKIKCIQDASG 164
Query: 433 AYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNP 492
+ + K+ +P+ E +V + G E +++A+++I L + R + P
Sbjct: 165 VRM-VAQKEMLPQ---STERIVEVQGTPEGIEKAVWEIGKCLIDDWQRGTGTVLYNPAVR 220
Query: 493 TFLDQVSPFPSFIG 506
+ S +F+G
Sbjct: 221 ANVGGASMNSAFVG 234
>gi|195377361|ref|XP_002047459.1| GJ11921 [Drosophila virilis]
gi|194154617|gb|EDW69801.1| GJ11921 [Drosophila virilis]
Length = 589
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 79/164 (48%), Gaps = 26/164 (15%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RL+ + VG +IGK G I+ ++E+G I + + +R++ +SG
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDG--SCPERIVTVSGTT------ 75
Query: 377 SAPQDAVLRVQTRIARAIPDNREQ----------TVMTRLLVASNQIGCLLGKGGSIIAE 426
+A+ T I + + Q + RL+V ++Q G L+GK GS I E
Sbjct: 76 ----NAIFSAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKE 131
Query: 427 MRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
+R+ +G I++ + +P + E V ++G E + + ++QI
Sbjct: 132 IRQTTGCSIQV-ASEMLP---NSTERAVTLSGSAEQITQCIYQI 171
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 95/220 (43%), Gaps = 38/220 (17%)
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQIDKLPTCAL---------ASDEVVQITGEVDTVRKAL 239
+RL+V ++Q G L+GK G IK+I + C++ +++ V ++G + + + +
Sbjct: 109 IRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPNSTERAVTLSGSAEQITQCI 168
Query: 240 KLISHQLLDNSPRDHESIPGNP----TGPSHPLPDHSVSSQGAPYATGHRDVAD------ 289
I +L++ PR +IP P TGP + + QG YA ++VA
Sbjct: 169 YQICLVMLESPPRG-ATIPYRPKPQVTGPVILANGQAFTIQG-NYAVPTQEVAKNPLASL 226
Query: 290 ---IHLPMPP---------SIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGA 337
M P ++ S + + + ++ +G +IGKGG
Sbjct: 227 AALGLAGMTPASTGGINHTALAALAGSQLRTANANRAQQQQHEMTVSNDLIGCIIGKGGT 286
Query: 338 IIRSLKQETGCDIKVM---EAVSGTEDRLIVISGPAHPDD 374
I ++Q +G I++ E G DR I ISG +PD
Sbjct: 287 KIAEIRQISGAMIRISNCEEREGGNTDRTITISG--NPDS 324
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 54/97 (55%), Gaps = 7/97 (7%)
Query: 387 QTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKC 446
Q R A A NR Q + V+++ IGC++GKGG+ IAE+R++SGA IRI ++ +
Sbjct: 254 QLRTANA---NRAQQQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEE--RE 308
Query: 447 ASENEEVVLINGEFEAVQEA--LFQITTRLRHHFFRD 481
+ + I+G ++V A L ++ L+ +D
Sbjct: 309 GGNTDRTITISGNPDSVALAQYLINMSVELQKANLQD 345
>gi|344232044|gb|EGV63923.1| hypothetical protein CANTEDRAFT_104592 [Candida tenuis ATCC 10573]
Length = 408
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 70/344 (20%), Positives = 147/344 (42%), Gaps = 61/344 (17%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEAS-DNKKET 104
I +R+L + +IG+ G +++ I Q+T + + ++ + ER++ + + DN +
Sbjct: 97 INYRLLISSKESGCLIGQSGSVINSIRQETDTKAGISKLLAHTQERILTVSGTLDNCSKA 156
Query: 105 SENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVF 164
++ ++ + + AS A S SV E
Sbjct: 157 ISYFSQALIEAQQHEADAASTA--SAGPMPSSVEEYPHF--------------------- 193
Query: 165 ERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKLPTCAL---- 220
P +++ +N VLRLL+ ++Q+G ++G G I++I ++ ++
Sbjct: 194 -------PLRQLSIHKNIAGHSTVLRLLIPNSQMGTIIGAKGARIQRIQQVFGVSMIASK 246
Query: 221 -----ASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSS 275
+++ +V++ G V + AL++IS L+++ G G S+ +P
Sbjct: 247 SFLPGSNERLVELQGSVPELYAALRVISRCLIEDF--------GGVVGTSYYVPRP---- 294
Query: 276 QGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSP-EILTFRLLCHDERVGGVIGK 334
R + P+P S P +G SP ++T + + VG +IGK
Sbjct: 295 --------RRPDVPVVAPLPVSAPAAPGTGPASDSSSSPARLVTTSMAFSKDIVGALIGK 346
Query: 335 GGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISA 378
G+ I+ +++ +G I + + + G+ +R+ ISG + D+ A
Sbjct: 347 SGSRIQGVRKISGAIIGISDELEGSSERIFTISGSTYAVDKAKA 390
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 134/340 (39%), Gaps = 88/340 (25%)
Query: 190 RLLVLSTQVGCLLGKGGCVIKQI----------DKLPTCALASDEVVQITGEVDTVRKAL 239
RLL+ S + GCL+G+ G VI I KL A + ++ ++G +D KA+
Sbjct: 100 RLLISSKESGCLIGQSGSVINSIRQETDTKAGISKL--LAHTQERILTVSGTLDNCSKAI 157
Query: 240 KLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSI- 298
S L++ + HE+ S +S G PMP S+
Sbjct: 158 SYFSQALIEA--QQHEA------------DAASTASAG---------------PMPSSVE 188
Query: 299 --PKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA- 355
P F + + RLL + ++G +IG GA I+ ++Q G + ++
Sbjct: 189 EYPHFPLRQLSIHKNIAGHSTVLRLLIPNSQMGTIIGAKGARIQRIQQVFGVSMIASKSF 248
Query: 356 VSGTEDRLIVISG--------------------------------PAHPDDRISAPQ--D 381
+ G+ +RL+ + G P PD + AP
Sbjct: 249 LPGSNERLVELQGSVPELYAALRVISRCLIEDFGGVVGTSYYVPRPRRPDVPVVAPLPVS 308
Query: 382 AVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKD 441
A T A + + V T + + + +G L+GK GS I +RK+SGA I I D
Sbjct: 309 APAAPGTGPASDSSSSPARLVTTSMAFSKDIVGALIGKSGSRIQGVRKISGAIIGI--SD 366
Query: 442 QIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRD 481
++ +E + I+G AV +A L+H+ R+
Sbjct: 367 EL---EGSSERIFTISGSTYAVDKA----KALLKHNLERE 399
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 93/200 (46%), Gaps = 35/200 (17%)
Query: 310 PKPSPE----ILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIV 365
P SPE ++ +RLL + G +IG+ G++I S++QET + + ++ T++R++
Sbjct: 86 PPVSPENGNALINYRLLISSKESGCLIGQSGSVINSIRQETDTKAGISKLLAHTQERILT 145
Query: 366 ISGPA-HPDDRISAPQDAVLRVQTRIARA--------IPDNREQ---------------- 400
+SG + IS A++ Q A A +P + E+
Sbjct: 146 VSGTLDNCSKAISYFSQALIEAQQHEADAASTASAGPMPSSVEEYPHFPLRQLSIHKNIA 205
Query: 401 --TVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLING 458
+ + RLL+ ++Q+G ++G G+ I ++++ G + I K +P NE +V + G
Sbjct: 206 GHSTVLRLLIPNSQMGTIIGAKGARIQRIQQVFGVSM-IASKSFLP---GSNERLVELQG 261
Query: 459 EFEAVQEALFQITTRLRHHF 478
+ AL I+ L F
Sbjct: 262 SVPELYAALRVISRCLIEDF 281
>gi|48716278|dbj|BAD22893.1| KH domain-containing protein NOVA-like [Oryza sativa Japonica
Group]
gi|48716520|dbj|BAD23125.1| KH domain-containing protein NOVA-like [Oryza sativa Japonica
Group]
Length = 343
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 154/362 (42%), Gaps = 63/362 (17%)
Query: 308 DRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVM---EAVSGTEDRLI 364
D+ KP+ R L + G +IGKGG+ I + ++G I++ E GT DR+I
Sbjct: 36 DKEKPT----HLRFLVSNTAAGCIIGKGGSTINEFQSQSGARIQLSRSHEFFPGTNDRII 91
Query: 365 VISGPAHPDDRISAPQDAVLRVQTRIARAIPDNR-EQTVMTRLLVASNQIGCLLGKGGSI 423
++SG D+ I A + L ++ +A N E RL+V ++ G ++GKGGS
Sbjct: 92 MVSGLF--DEVIKAME---LILEKLLAEGEESNEAEARPKVRLVVPNSSCGGIIGKGGST 146
Query: 424 IAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAF 483
I + S A I+I +D ++ +V + G + A++ I ++L
Sbjct: 147 IKSFIEDSHAGIKISPQDN--NFVGLHDRLVTVTGPLDHQMRAIYLILSKLSE------- 197
Query: 484 PSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFG-PSFHKFDAVGGPPPPGSFHPHD 542
++ P N + SPFP + G S PG+ + P +AV ++ P+
Sbjct: 198 -DVHYPPNLS-----SPFP-YAGLGFPSYPGVPVGYMIPQVPYNNAV-------NYGPNG 243
Query: 543 DHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPI 602
+ + ++P P P Q + +G + +
Sbjct: 244 YGGRYQN--NKPSTPMRSPANNDA--QDSLTIG-------------------IADEHIGA 280
Query: 603 IQGEDGACLKQIRQISDAKITITDPK---PGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
+ G G + +I Q S A+I I+D G +E + I+GT E AA+S+I V +
Sbjct: 281 VVGRAGRNITEIIQASGARIKISDRGDFIAGTSERKVTITGTSEAIQAAESMIMQRVTAS 340
Query: 660 TE 661
+E
Sbjct: 341 SE 342
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 110/259 (42%), Gaps = 50/259 (19%)
Query: 137 VNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLST 196
N+ +++ GL E V KA+ L+ E+++ ++ N ++ +RL+V ++
Sbjct: 86 TNDRIIMVSGLFDE-----VIKAMELILEKLLAE------GEESNEAEARPKVRLVVPNS 134
Query: 197 QVGCLLGKGGCVIKQIDKLPTCALA-----------SDEVVQITGEVDTVRKALKLISHQ 245
G ++GKGG IK + + D +V +TG +D +A+ LI +
Sbjct: 135 SCGGIIGKGGSTIKSFIEDSHAGIKISPQDNNFVGLHDRLVTVTGPLDHQMRAIYLILSK 194
Query: 246 LLDN--------SPRDHE-----SIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIHL 292
L ++ SP + S PG P G P ++ + P G R +
Sbjct: 195 LSEDVHYPPNLSSPFPYAGLGFPSYPGVPVGYMIPQVPYNNAVNYGPNGYGGR-----YQ 249
Query: 293 PMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV 352
PS P + P + + + DE +G V+G+ G I + Q +G IK+
Sbjct: 250 NNKPSTP-------MRSPANNDAQDSLTIGIADEHIGAVVGRAGRNITEIIQASGARIKI 302
Query: 353 MEA---VSGTEDRLIVISG 368
+ ++GT +R + I+G
Sbjct: 303 SDRGDFIAGTSERKVTITG 321
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 396 DNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVL 455
D++E+ R LV++ GC++GKGGS I E + SGA I++ + N+ +++
Sbjct: 35 DDKEKPTHLRFLVSNTAAGCIIGKGGSTINEFQSQSGARIQLSRSHEF--FPGTNDRIIM 92
Query: 456 INGEFEAVQEALFQITTRL 474
++G F+ V +A+ I +L
Sbjct: 93 VSGLFDEVIKAMELILEKL 111
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 11/79 (13%)
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQIDKLPTCAL-----------ASDEVVQITGEVDTVRK 237
LR LV +T GC++GKGG I + + +D ++ ++G D V K
Sbjct: 43 LRFLVSNTAAGCIIGKGGSTINEFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLFDEVIK 102
Query: 238 ALKLISHQLLDNSPRDHES 256
A++LI +LL +E+
Sbjct: 103 AMELILEKLLAEGEESNEA 121
>gi|386771588|ref|NP_001246874.1| mushroom-body expressed, isoform I [Drosophila melanogaster]
gi|383292064|gb|AFH04545.1| mushroom-body expressed, isoform I [Drosophila melanogaster]
Length = 539
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 79/160 (49%), Gaps = 22/160 (13%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RL+ + VG +IGK G I+ ++E+G I + + +R++ +SG
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDG--SCPERIVTVSGTT------ 75
Query: 377 SAPQDAVLRVQTRIARAIPDNRE------QTVMTRLLVASNQIGCLLGKGGSIIAEMRKL 430
+A+ T I + + + + RL+V ++Q G L+GK GS I E+R+
Sbjct: 76 ----NAIFSAFTLITKKFEEFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQT 131
Query: 431 SGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
+G I++ + +P + E V ++G E + + ++QI
Sbjct: 132 TGCSIQV-ASEMLP---NSTERAVTLSGSAEQITQCIYQI 167
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
Query: 388 TRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCA 447
+++ A P NR Q + V+++ IGC++GKGG+ IAE+R++SGA IRI ++ +
Sbjct: 254 SQLRTANPANRAQQQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REG 311
Query: 448 SENEEVVLINGEFEAVQEALFQI 470
+ + I+G ++V A + I
Sbjct: 312 GNTDRTITISGNPDSVALAQYLI 334
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 109/262 (41%), Gaps = 50/262 (19%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI 212
T+ + A L+ ++ E +V ++ +RL+V ++Q G L+GK G IK+I
Sbjct: 75 TNAIFSAFTLITKKFEEFNDVGKVGK------TQIPIRLIVPASQCGSLIGKSGSKIKEI 128
Query: 213 DKLPTCAL---------ASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNP-- 261
+ C++ +++ V ++G + + + + I +L++ PR +IP P
Sbjct: 129 RQTTGCSIQVASEMLPNSTERAVTLSGSAEQITQCIYQICLVMLESPPRG-ATIPYRPKP 187
Query: 262 --TGPSHPLPDHSVSSQGAPYATGHRDVAD----------IHLPMPPSIPKFHESGV--- 306
TGP + + QG YA ++VA + P S + +G
Sbjct: 188 QVTGPVILANGQAFTIQG-NYAVPTQEVAKNPLASLAALGLAGMNPASTGGINHTGSAPA 246
Query: 307 -----------LDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVM-- 353
P + + ++ +G +IGKGG I ++Q +G I++
Sbjct: 247 ALAALAGSQLRTANPANRAQQQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNC 306
Query: 354 -EAVSGTEDRLIVISGPAHPDD 374
E G DR I ISG +PD
Sbjct: 307 EEREGGNTDRTITISG--NPDS 326
>gi|426355648|ref|XP_004065478.1| PREDICTED: LOW QUALITY PROTEIN: insulin-like growth factor 2
mRNA-binding protein 3 [Gorilla gorilla gorilla]
Length = 600
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 102/462 (22%), Positives = 172/462 (37%), Gaps = 128/462 (27%)
Query: 39 SKSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEAS 98
SK P + R+L P + +IGK+G + I++ T I
Sbjct: 244 SKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKI------------------- 284
Query: 99 DNKKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQK 158
+ R EN G E S+ S E + +++ ++ E + K+
Sbjct: 285 ------------DVHRKENAGAAEKSITILST--PEGTSAACKSILEIMHKEAQDIKLXV 330
Query: 159 ALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKLPTC 218
+++ + + PE + + N + TC
Sbjct: 331 KKIVLLQELTLYNPERTITVKGNVE---------------------------------TC 357
Query: 219 ALASDEVVQ-ITGEVDTVRKALKLISHQLLDNSPRDHESIPG---NPTGPSHPLPDHSVS 274
A A +E+++ I + ++ L +H IPG N G P
Sbjct: 358 AKAEEEIMKKIRESYENDIASMNLQAH-----------LIPGLNLNALGLFPPTSGMPPP 406
Query: 275 SQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGK 334
+ G P A M P P+F +S E T L VG +IGK
Sbjct: 407 TSGPPSA------------MTPPYPQFEQS----------ETETVHLFIPALSVGAIIGK 444
Query: 335 GGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARA 393
G I+ L + G IK+ A + + R+++I+GP +A + Q RI
Sbjct: 445 QGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPP----------EAQFKAQGRIYGK 494
Query: 394 IPD------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCA 447
I + E + + V S G ++GKGG + E++ LS A + ++ +DQ P
Sbjct: 495 IKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEV-VVPRDQTP--- 550
Query: 448 SENEEVVL-INGEFEAVQEA---LFQITTRLRHHFFRDAFPS 485
EN++VV+ I G F A Q A + +I T+++ H + A S
Sbjct: 551 DENDQVVVKITGHFYACQVAQRKIQEILTQVKQHQQQKALQS 592
>gi|402860705|ref|XP_003894763.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 4 [Papio anubis]
Length = 542
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 111/501 (22%), Positives = 198/501 (39%), Gaps = 126/501 (25%)
Query: 14 DDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIM--------FRVLCPVSKIDGVIGKDG 65
D+ + P+ +++Q+ GD+S + + PGG R+L P + +IGK+G
Sbjct: 100 DEEVSSPSPPQRAQR--GDHSSREQGHA-PGGTSQARQIDFPLRILVPTQFVGAIIGKEG 156
Query: 66 EMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASV 125
+ I++ T + I R EN+G E V
Sbjct: 157 LTIKNITKQTQSRV-------------------------------DIHRKENSGAAEKPV 185
Query: 126 ADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSS 185
+ EG+ +A ++ E M + ET++A++
Sbjct: 186 TIHA-------TPEGT---------------SEACRMILEIMQKEADETKLAEE------ 217
Query: 186 KFVLRLLVLSTQVGCLLGKGGCVIKQID-----KLPTCALAS------DEVVQITGEVDT 234
L++L + VG L+GK G +K+I+ K+ +L + + + G V+
Sbjct: 218 -IPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEA 276
Query: 235 VRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVAD----- 289
A I +L + D ++ ++ +P ++S+ G ++TG ++
Sbjct: 277 CASAEIEIMKKLREAFENDMLAV----NQQANLIPGLNLSALGI-FSTGLSVLSPPAGPR 331
Query: 290 ------------IHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGA 337
H S+ H+ G PE L + VG +IGK GA
Sbjct: 332 GAPPAAPYHPFATHSGYFSSLYPHHQFGPFPHHHSYPEQEVVNLFIPTQAVGAIIGKKGA 391
Query: 338 IIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPD 396
I+ L + G IK+ A +R+++I+GP +A + Q RI + +
Sbjct: 392 HIKQLARFAGASIKIAPAEGPDVSERMVIITGPP----------EAQFKAQGRIFGKLKE 441
Query: 397 ------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASEN 450
E + + V S+ G ++GKGG + E++ L+ A + I+ +DQ P EN
Sbjct: 442 ENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP---DEN 497
Query: 451 EEVVL-INGEFEAVQEALFQI 470
EEV++ I G F A Q A +I
Sbjct: 498 EEVIVRIIGHFFASQTAQRKI 518
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 141/343 (41%), Gaps = 55/343 (16%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV-MEAVSGTEDRLIVISGPAHPDDRIS 377
R+L + VG +IGK G I+++ ++T + + + SG ++ + I A P+
Sbjct: 139 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIH--ATPEGTSE 196
Query: 378 APQDAVLRV------QTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLS 431
A + +L + +T++A IP ++L + +G L+GK G + ++ +
Sbjct: 197 ACR-MILEIMQKEADETKLAEEIP--------LKILAHNGLVGRLIGKEGRNLKKIEHET 247
Query: 432 GAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLN 491
G I I + E + + G EA A +I +LR F D ++N+ N
Sbjct: 248 GTKITISSLQDL--SIYNPERTITVKGTVEACASAEIEIMKKLREAFENDML-AVNQQAN 304
Query: 492 PTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHI 551
I LS G++S G PP +HP HS + +
Sbjct: 305 ------------LIPGLNLSALGIFSTGLSVLSPPAGPRGAPPAAPYHPFATHSGYFSSL 352
Query: 552 HRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRR-VPVVVPRSLVPIIQGEDGAC 610
+ PH +GP FP P + V + +P V I G+ GA
Sbjct: 353 Y-----PH----HQFGP-----------FPHHHSYPEQEVVNLFIPTQAVGAIIGKKGAH 392
Query: 611 LKQIRQISDAKITITDPK-PGATETVIIISGTPEQTHAAQSLI 652
+KQ+ + + A I I + P +E ++II+G PE AQ I
Sbjct: 393 IKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI 435
>gi|281366597|ref|NP_001163493.1| mushroom-body expressed, isoform E [Drosophila melanogaster]
gi|386771584|ref|NP_001246873.1| mushroom-body expressed, isoform F [Drosophila melanogaster]
gi|134085557|gb|ABO52837.1| IP17311p [Drosophila melanogaster]
gi|272455272|gb|ACZ94764.1| mushroom-body expressed, isoform E [Drosophila melanogaster]
gi|383292063|gb|AFH04544.1| mushroom-body expressed, isoform F [Drosophila melanogaster]
Length = 557
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 79/160 (49%), Gaps = 22/160 (13%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RL+ + VG +IGK G I+ ++E+G I + + +R++ +SG
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDG--SCPERIVTVSGTT------ 75
Query: 377 SAPQDAVLRVQTRIARAIPDNRE------QTVMTRLLVASNQIGCLLGKGGSIIAEMRKL 430
+A+ T I + + + + RL+V ++Q G L+GK GS I E+R+
Sbjct: 76 ----NAIFSAFTLITKKFEEFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQT 131
Query: 431 SGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
+G I++ + +P + E V ++G E + + ++QI
Sbjct: 132 TGCSIQV-ASEMLP---NSTERAVTLSGSAEQITQCIYQI 167
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 393 AIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEE 452
A P NR Q + V+++ IGC++GKGG+ IAE+R++SGA IRI ++ + +
Sbjct: 277 ANPANRAQQQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGNTDR 334
Query: 453 VVLINGEFEAVQEALFQI 470
+ I+G ++V A + I
Sbjct: 335 TITISGNPDSVALAQYLI 352
Score = 45.4 bits (106), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 97/244 (39%), Gaps = 62/244 (25%)
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQIDKLPTCAL---------ASDEVVQITGEVDTVRKAL 239
+RL+V ++Q G L+GK G IK+I + C++ +++ V ++G + + + +
Sbjct: 105 IRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPNSTERAVTLSGSAEQITQCI 164
Query: 240 KLISHQLLDNSPRDHESIPGNP----TGPSHPLPDHSVSSQGAPYATGHRDVAD------ 289
I +L++ PR +IP P TGP + + QG YA ++VA
Sbjct: 165 YQICLVMLESPPRG-ATIPYRPKPQVTGPVILANGQAFTIQG-NYAVPTQEVAKNPLASL 222
Query: 290 ----IHLPMPPSIPKFHESGVLD--------------------------------RPKPS 313
+ P S + +G L P
Sbjct: 223 AALGLAGMNPASTGGINHTGELSASAARCQTDFQSNLGSAPAALAALAGSQLRTANPANR 282
Query: 314 PEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVM---EAVSGTEDRLIVISGPA 370
+ + ++ +G +IGKGG I ++Q +G I++ E G DR I ISG
Sbjct: 283 AQQQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISG-- 340
Query: 371 HPDD 374
+PD
Sbjct: 341 NPDS 344
>gi|146422870|ref|XP_001487369.1| hypothetical protein PGUG_00746 [Meyerozyma guilliermondii ATCC
6260]
Length = 545
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 86/172 (50%), Gaps = 22/172 (12%)
Query: 314 PEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPD 373
P ++FR+ C + VIGK G +I L+++ I+V E + ++R+I++ GPA
Sbjct: 199 PTYVSFRMYCPVKEASFVIGKRGDMINHLREKANARIQVSENIKDVQERIILVKGPA--- 255
Query: 374 DRISAPQDAVLRVQTRIARAI---PDNREQTVMTR-----LLVASNQIGCLLGKGGSIIA 425
+ V + I RAI P++ ++M+R +L+ +G ++GKGGS
Sbjct: 256 -------ENVAKAFGLITRAILEEPEDEPASIMSRQYNLKVLIPHPMVGYIIGKGGSKFR 308
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHH 477
E+ + S A ++ + +P + V+ + G +A+ A++ I+ + H
Sbjct: 309 EIEENSAAKLK-AAEQPLPNST---DRVLSVLGVGDAIHIAIYYISQVIIEH 356
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 75/360 (20%), Positives = 140/360 (38%), Gaps = 110/360 (30%)
Query: 43 PGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKK 102
P + FR+ CPV + VIGK G+M++ + + I+V E + ER++++ K
Sbjct: 199 PTYVSFRMYCPVKEASFVIGKRGDMINHLREKANARIQVSENIKDVQERIILV------K 252
Query: 103 ETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLL 162
+EN+ + GL + +A+L
Sbjct: 253 GPAENVAKAF---------------------------------GL--------ITRAIL- 270
Query: 163 VFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKLPTCAL-- 220
EPE E A + S ++ L++L+ VG ++GKGG ++I++ L
Sbjct: 271 -------EEPEDEPA---SIMSRQYNLKVLIPHPMVGYIIGKGGSKFREIEENSAAKLKA 320
Query: 221 -------ASDEVVQITGEVDTVRKALKLIS------------HQLLDNSPRDHE------ 255
++D V+ + G D + A+ IS H+++ +P +++
Sbjct: 321 AEQPLPNSTDRVLSVLGVGDAIHIAIYYISQVIIEHKDILKKHKIVYYTPGNNQLMNNTM 380
Query: 256 -SIPGNPTGPSHPLPD----------HSVSSQGAPYATGHRDVADIHLPMPPSIPKFHES 304
IP N G + + + H+ Q P A H + P+P + E
Sbjct: 381 GLIPNNTYGNTGIIGNDPIQGGAPFQHNYQRQFQPSAPSHNQIT---TPVPTQL-YTDEH 436
Query: 305 G-------VLDRPKPS---PEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVME 354
G + P P+ + + + + +G VIGKGG I+ +++ +GC +E
Sbjct: 437 GNTMIGDVITSVPVPAGTGTDKFSEDVFVANTNIGSVIGKGGNNIKQIRESSGCSYVKIE 496
>gi|222623934|gb|EEE58066.1| hypothetical protein OsJ_08922 [Oryza sativa Japonica Group]
Length = 313
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 153/373 (41%), Gaps = 85/373 (22%)
Query: 308 DRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVM---EAVSGTEDRLI 364
D+ KP+ R L + G +IGKGG+ I + ++G I++ E GT DR+I
Sbjct: 6 DKEKPT----HLRFLVSNTAAGCIIGKGGSTINEFQSQSGARIQLSRSHEFFPGTNDRII 61
Query: 365 VISGPAHPDDRISAPQDAVLRVQTRIARAIPDNR-EQTVMTRLLVASNQIGCLLGKGGSI 423
++SG D+ I A + L ++ +A N E RL+V ++ G ++GKGGS
Sbjct: 62 MVSGLF--DEVIKAME---LILEKLLAEGEESNEAEARPKVRLVVPNSSCGGIIGKGGST 116
Query: 424 IAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAF 483
I + S A I+I +D ++ +V + G + A++ I ++L
Sbjct: 117 IKSFIEDSHAGIKISPQDN--NFVGLHDRLVTVTGPLDHQMRAIYLILSKLSE------- 167
Query: 484 PSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFG-PSFHKFDAVGGPPPPGSFHPHD 542
++ P N + SPFP Y+ G PS+ P P +
Sbjct: 168 -DVHYPPNLS-----SPFP-------------YAGLGFPSY--------PGVPVGY---- 196
Query: 543 DHSAFMHHIHRPGMPPHMP--DMKPWGPQGLMEVGG---------PMGFPDFVGPPHRRV 591
M P +P + +GP G GG PM P +
Sbjct: 197 -------------MIPQVPYNNAVNYGPNGY---GGRYQNNKPSTPMRSPAN-NDAQDSL 239
Query: 592 PVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPK---PGATETVIIISGTPEQTHAA 648
+ + + + G G + +I Q S A+I I+D G +E + I+GT E AA
Sbjct: 240 TIGIADEHIGAVVGRAGRNITEIIQASGARIKISDRGDFIAGTSERKVTITGTSEAIQAA 299
Query: 649 QSLIQAFVMSETE 661
+S+I V + +E
Sbjct: 300 ESMIMQRVTASSE 312
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 110/258 (42%), Gaps = 50/258 (19%)
Query: 138 NEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQ 197
N+ +++ GL E V KA+ L+ E+++ ++ N ++ +RL+V ++
Sbjct: 57 NDRIIMVSGLFDE-----VIKAMELILEKLLAE------GEESNEAEARPKVRLVVPNSS 105
Query: 198 VGCLLGKGGCVIKQIDKLPTCALA-----------SDEVVQITGEVDTVRKALKLISHQL 246
G ++GKGG IK + + D +V +TG +D +A+ LI +L
Sbjct: 106 CGGIIGKGGSTIKSFIEDSHAGIKISPQDNNFVGLHDRLVTVTGPLDHQMRAIYLILSKL 165
Query: 247 LDN--------SPRDHE-----SIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLP 293
++ SP + S PG P G P ++ + P G R +
Sbjct: 166 SEDVHYPPNLSSPFPYAGLGFPSYPGVPVGYMIPQVPYNNAVNYGPNGYGGR-----YQN 220
Query: 294 MPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVM 353
PS P + P + + + DE +G V+G+ G I + Q +G IK+
Sbjct: 221 NKPSTP-------MRSPANNDAQDSLTIGIADEHIGAVVGRAGRNITEIIQASGARIKIS 273
Query: 354 EA---VSGTEDRLIVISG 368
+ ++GT +R + I+G
Sbjct: 274 DRGDFIAGTSERKVTITG 291
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 396 DNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVL 455
D++E+ R LV++ GC++GKGGS I E + SGA I++ + N+ +++
Sbjct: 5 DDKEKPTHLRFLVSNTAAGCIIGKGGSTINEFQSQSGARIQLSRSHEF--FPGTNDRIIM 62
Query: 456 INGEFEAVQEALFQITTRL 474
++G F+ V +A+ I +L
Sbjct: 63 VSGLFDEVIKAMELILEKL 81
Score = 43.5 bits (101), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 11/79 (13%)
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQIDKLPTCAL-----------ASDEVVQITGEVDTVRK 237
LR LV +T GC++GKGG I + + +D ++ ++G D V K
Sbjct: 13 LRFLVSNTAAGCIIGKGGSTINEFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLFDEVIK 72
Query: 238 ALKLISHQLLDNSPRDHES 256
A++LI +LL +E+
Sbjct: 73 AMELILEKLLAEGEESNEA 91
>gi|255583738|ref|XP_002532622.1| Far upstream element-binding protein, putative [Ricinus communis]
gi|223527642|gb|EEF29753.1| Far upstream element-binding protein, putative [Ricinus communis]
Length = 314
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 79/158 (50%), Gaps = 7/158 (4%)
Query: 320 RLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV---MEAVSGTEDRLIVISGPAHPDDRI 376
R L + G VIGKGGA I + ++G I++ E GT DR+I+ISG DD +
Sbjct: 39 RFLVSNAAAGSVIGKGGATITDFQSQSGARIQLSRNYEFFPGTSDRIILISGIL--DDVL 96
Query: 377 SAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIR 436
+ + ++ + + D+ + RL+V ++ G ++GKGGSII + S A I+
Sbjct: 97 KGVELVLAKLLSELHTEDGDDVDPRTKVRLVVPNSSCGSIIGKGGSIIKSFIEESQAGIK 156
Query: 437 ILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRL 474
I +D N+ +V + G E A+ I ++L
Sbjct: 157 ISPQDN--NFYGLNDRLVTVTGTLEEQMRAIDLILSKL 192
>gi|453080702|gb|EMF08752.1| hypothetical protein SEPMUDRAFT_151698 [Mycosphaerella populorum
SO2202]
Length = 518
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 142/370 (38%), Gaps = 50/370 (13%)
Query: 315 EILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDD 374
+ L R + VIGKGG + +++ G V E G +R++ +SG D
Sbjct: 150 QWLHVRAIISSAEAATVIGKGGENVSQIRKLAGAKCTVSEYTRGAVERVLTVSGQV---D 206
Query: 375 RISAPQDAVLRVQTRIARAIPDN-REQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
++ ++R + P + +T RLL+ IG ++GK G I E+++ SGA
Sbjct: 207 AVAKAFGLIIRTLNQEPLEEPSTPQSKTYPLRLLIPHILIGSIIGKQGVRIREIQEASGA 266
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPT 493
R+ + ++E VVL G +AV A + + + L D F P
Sbjct: 267 --RLNASESCLPLSTERSLVVL--GVADAVHIATYYVGSTLVEQLT-DRF---GGPAASN 318
Query: 494 FLD-------------QVSPF-PSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFH 539
+ QV P+ P G + P + GP GPP P
Sbjct: 319 YAGRHGGPQGVVPGGMQVVPYVPQNTGGQVGQPDNNRRHNGPPSR------GPPVPYGAP 372
Query: 540 PHDDHSAFMHH----IHRPGMPPHMPDMKPWGPQGLMEVG--GPMGFPDFVGPPHRRV-- 591
S + +H P P GP G P P GPP + V
Sbjct: 373 SMHGQSPYPQQPVAPVHYGAGSPRAP-YAGAGPHQAHPYGHAAPQPGPGHAGPPQQPVQG 431
Query: 592 ---------PVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTP 642
+ +P +V I G+ GA + +IRQ+S + I I +P+ E ++ I+GT
Sbjct: 432 VGPGQPITQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQDNNNERLVTITGTQ 491
Query: 643 EQTHAAQSLI 652
E A ++
Sbjct: 492 ECNQMALYML 501
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 400 QTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGE 459
Q + ++ + ++ +G ++GKGG+ I E+R+LSG+ I+I + NE +V I G
Sbjct: 436 QPITQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQD-----NNNERLVTITGT 490
Query: 460 FEAVQEALFQITTRL 474
E Q AL+ + +RL
Sbjct: 491 QECNQMALYMLYSRL 505
>gi|302926012|ref|XP_003054209.1| hypothetical protein NECHADRAFT_30745 [Nectria haematococca mpVI
77-13-4]
gi|256735150|gb|EEU48496.1| hypothetical protein NECHADRAFT_30745 [Nectria haematococca mpVI
77-13-4]
Length = 472
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 96/386 (24%), Positives = 149/386 (38%), Gaps = 89/386 (23%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
+ R + VIGKGG + ++++ + V + G +R++ +SG
Sbjct: 112 IHIRAVISSPEAATVIGKGGENVSNIRKLSNARCTVSDYQKGAVERILTVSGIV------ 165
Query: 377 SAPQDAVLRVQTRIARAI---PDNREQTVMT-----RLLVASNQIGCLLGKGGSIIAEMR 428
DAV + I R + P N T + RLL+ IG ++GKGG+ I E++
Sbjct: 166 ----DAVAKAFGLIIRTLNNEPLNESSTSSSKTYPLRLLIPHILIGSIIGKGGARIREIQ 221
Query: 429 KLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINR 488
+ SGA R+ D +SE VV+ G +AV A + + + L
Sbjct: 222 EASGA--RLNASDACLPMSSERSLVVM--GVADAVHIATYYVGSTLLEQ----------- 266
Query: 489 PLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFH--------P 540
LN F P S R +P G V P P S H
Sbjct: 267 -LNDRF---GGPAASAYATRSGAPAGSIPG------GMQVVPYCPQPASGHYGRGENYAR 316
Query: 541 HDDHSAFMHHIH---------------RPGMPPH----------------MPDMKP-WGP 568
H+D + HH+ P MP H P M P GP
Sbjct: 317 HNDRRS--HHMPPAPYPQQYPHAAAQANPAMPMHYGGAQGGGAYGAAPHVQPHMPPHAGP 374
Query: 569 Q--GLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITD 626
Q G PMG GP ++ + +P +V I G+ G + +IRQ+S++ I I +
Sbjct: 375 QAHGGAPQAQPMGAAIPGGPITQQ--IYIPNDMVGAIIGKGGQKINEIRQMSNSVIKINE 432
Query: 627 PKPGATETVIIISGTPEQTHAAQSLI 652
P+ + E ++ I+GT E A ++
Sbjct: 433 PQDNSNERLVTITGTEECNRMALYML 458
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 402 VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFE 461
+ ++ + ++ +G ++GKGG I E+R++S + I+I P+ S NE +V I G E
Sbjct: 395 ITQQIYIPNDMVGAIIGKGGQKINEIRQMSNSVIKI----NEPQDNS-NERLVTITGTEE 449
Query: 462 AVQEALFQITTRL 474
+ AL+ + +RL
Sbjct: 450 CNRMALYMLYSRL 462
>gi|345564609|gb|EGX47569.1| hypothetical protein AOL_s00083g77 [Arthrobotrys oligospora ATCC
24927]
Length = 459
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 86/374 (22%), Positives = 147/374 (39%), Gaps = 56/374 (14%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISA 378
R L VIGKGG + +++ + V E G +R++ +SG D ++
Sbjct: 105 VRALITSAEAATVIGKGGENVTQIRRLSEAKCTVSEYTRGAVERILTVSGGV---DAVAK 161
Query: 379 PQDAVLR-VQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRI 437
++R + + + +T RLL+ IG ++GKGG I E++ SGA R+
Sbjct: 162 AFGLIIRTINSEPLSSASTQNSKTFPLRLLIPHILIGSIIGKGGMRIREIQDASGA--RL 219
Query: 438 LGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFR-------DAFPSINRPL 490
D ++E +++ G +AV A + + T L A+ S +
Sbjct: 220 NASDSCLPLSTERS--LMVVGVADAVHIATYYVATTLVEQLTERFGGPAASAYASRSGGP 277
Query: 491 NPTFLD--QVSPF---PSF---------------IGRRELSPPGMYSNFGPSFHKFDAVG 530
QV P+ P+F R +P G+ P H V
Sbjct: 278 AGAVPGGMQVVPYTPQPAFGNYGHPDNYRRHNNQAQRTPANPYGI-----PYLHGQPPVQ 332
Query: 531 GPPPPGSFHPHDDHSAFM-HHIHRPGMPPH----MPDMKPWGPQGLMEVGGPMGFPDFVG 585
P P + A+ H+P +P H P + G M G P+
Sbjct: 333 QPAAPIHYADPSAQPAYSGAGPHQPTVPHHGAHTGPAAQGHGNMAAMIPGAPL------- 385
Query: 586 PPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQT 645
+ +P +V I G+ GA + +IRQ+S + I I +P+ + E ++ I+GT E
Sbjct: 386 ----TQQIYIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQDNSNERLVTITGTQECN 441
Query: 646 HAAQSLIQAFVMSE 659
A ++ + + SE
Sbjct: 442 QMALYMLYSRLESE 455
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 33/52 (63%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
LT ++ ++ VG +IGKGGA I ++Q +G IK+ E + +RL+ I+G
Sbjct: 385 LTQQIYIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQDNSNERLVTITG 436
>gi|145207996|ref|NP_898850.2| insulin-like growth factor 2 mRNA-binding protein 2 [Mus musculus]
gi|81889459|sp|Q5SF07.1|IF2B2_MOUSE RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 2;
Short=IGF2 mRNA-binding protein 2; Short=IMP-2; AltName:
Full=IGF-II mRNA-binding protein 2; AltName: Full=VICKZ
family member 2
gi|46577878|gb|AAT01428.1| insulin-like growth factor 2 mRNA-binding protein 2 [Mus musculus]
Length = 592
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 93/394 (23%), Positives = 154/394 (39%), Gaps = 72/394 (18%)
Query: 268 LPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDER 327
+PD VSS P HR H P S ++ +D P R+L +
Sbjct: 155 IPDEEVSSPSPP----HRAREQGHGPGSSS-----QARQIDFP--------LRILVPTQF 197
Query: 328 VGGVIGKGGAIIRSLKQETGCDIKV-MEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRV 386
VG +IGK G I+++ ++T + + + SG ++ + I A P+ A + +L +
Sbjct: 198 VGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIH--ATPEGTSEACR-MILEI 254
Query: 387 ------QTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGK 440
+T++A +P ++L + +G L+GK G + ++ +G I I
Sbjct: 255 MQKEADETKLAEEVP--------LKILAHNGFVGRLIGKEGRNLKKIEHETGTKITISSL 306
Query: 441 DQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSP 500
+ E + + G EA A +I +LR F D ++N+ N +S
Sbjct: 307 QDL--SIYNPERTITVRGTIEACANAEIEIMKKLREAFENDML-AVNQQANLIPGLNLSA 363
Query: 501 FPSF-IGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPH 559
F G L PP GP G PP +HP HS + ++
Sbjct: 364 LGIFSTGLSVLPPPA-----GPR--------GVPPSPPYHPFATHSGYFSSLYPHHHFGP 410
Query: 560 MPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISD 619
P + P V + +P V I G+ GA +KQ+ + +
Sbjct: 411 FPHHHSY-------------------PEQETVSLFIPTQAVGAIIGKKGAHIKQLARFAG 451
Query: 620 AKITITDPK-PGATETVIIISGTPEQTHAAQSLI 652
A I I + P +E ++II+G PE AQ I
Sbjct: 452 ASIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI 485
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 106/462 (22%), Positives = 178/462 (38%), Gaps = 121/462 (26%)
Query: 48 FRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSEN 107
R+L P + +IGK+G + I++ T +
Sbjct: 189 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRV---------------------------- 220
Query: 108 LEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERM 167
I R EN+G E V + EG+ +A ++ E M
Sbjct: 221 ---DIHRKENSGAAEKPVTIHA-------TPEGT---------------SEACRMILEIM 255
Query: 168 VEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQID-----KLPTCALAS 222
+ ET++A++ L++L + VG L+GK G +K+I+ K+ +L
Sbjct: 256 QKEADETKLAEE-------VPLKILAHNGFVGRLIGKEGRNLKKIEHETGTKITISSLQD 308
Query: 223 ------DEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQ 276
+ + + G ++ A I +L + D ++ ++ +P ++S+
Sbjct: 309 LSIYNPERTITVRGTIEACANAEIEIMKKLREAFENDMLAV----NQQANLIPGLNLSAL 364
Query: 277 G--------APYATGHRDVADIHLPMPPSIPKFHESGVLD------------RPKPSPEI 316
G P G R V P PP P SG PE
Sbjct: 365 GIFSTGLSVLPPPAGPRGVP----PSPPYHPFATHSGYFSSLYPHHHFGPFPHHHSYPEQ 420
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDR 375
T L + VG +IGK GA I+ L + G IK+ A +R+++I+GP
Sbjct: 421 ETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPP----- 475
Query: 376 ISAPQDAVLRVQTRIARAIPD------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRK 429
+A + Q RI + + E + + V S+ G ++GKGG + E++
Sbjct: 476 -----EAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQN 530
Query: 430 LSGAYIRILGKDQIPKCASENEEVVL-INGEFEAVQEALFQI 470
L+ A + I+ +DQ P ENEEV++ I G F A Q A +I
Sbjct: 531 LTSAEV-IVPRDQTP---DENEEVIVRIIGHFFASQTAQRKI 568
>gi|45553235|ref|NP_996145.1| mushroom-body expressed, isoform C [Drosophila melanogaster]
gi|194876029|ref|XP_001973701.1| GG16232 [Drosophila erecta]
gi|195496648|ref|XP_002095782.1| GE22592 [Drosophila yakuba]
gi|16648354|gb|AAL25442.1| LD32520p [Drosophila melanogaster]
gi|45446078|gb|AAS65095.1| mushroom-body expressed, isoform C [Drosophila melanogaster]
gi|190655484|gb|EDV52727.1| GG16232 [Drosophila erecta]
gi|194181883|gb|EDW95494.1| GE22592 [Drosophila yakuba]
gi|220951950|gb|ACL88518.1| mub-PC [synthetic construct]
Length = 364
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 79/164 (48%), Gaps = 26/164 (15%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RL+ + VG +IGK G I+ ++E+G I + + +R++ +SG
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDG--SCPERIVTVSGTT------ 75
Query: 377 SAPQDAVLRVQTRIARAIPDNREQ----------TVMTRLLVASNQIGCLLGKGGSIIAE 426
+A+ T I + + Q + RL+V ++Q G L+GK GS I E
Sbjct: 76 ----NAIFSAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKE 131
Query: 427 MRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
+R+ +G I++ + +P + E V ++G E + + ++QI
Sbjct: 132 IRQTTGCSIQV-ASEMLP---NSTERAVTLSGSAEQITQCIYQI 171
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 55/98 (56%), Gaps = 4/98 (4%)
Query: 377 SAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIR 436
+A A+ Q R A P NR Q + V+++ IGC++GKGG+ IAE+R++SGA IR
Sbjct: 245 TAALAALAGSQLRTAN--PANRAQQQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIR 302
Query: 437 ILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRL 474
I ++ + + + I+G ++V A + I R+
Sbjct: 303 ISNCEE--REGGNTDRTITISGNPDSVALAQYLINMRI 338
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 110/258 (42%), Gaps = 42/258 (16%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI 212
T+ + A L+ ++ E ++ D ++ +RL+V ++Q G L+GK G IK+I
Sbjct: 75 TNAIFSAFTLITKKFEEWC--SQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEI 132
Query: 213 DKLPTCAL---------ASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNP-- 261
+ C++ +++ V ++G + + + + I +L++ PR +IP P
Sbjct: 133 RQTTGCSIQVASEMLPNSTERAVTLSGSAEQITQCIYQICLVMLESPPRG-ATIPYRPKP 191
Query: 262 --TGPSHPLPDHSVSSQGAPYATGHRDVAD----------IHLPMPPSIPKFHESGVL-- 307
TGP + + QG YA ++VA + P S + + L
Sbjct: 192 QVTGPVILANGQAFTIQGN-YAVPTQEVAKNPLASLAALGLAGMNPASTGGINHTAALAA 250
Query: 308 --------DRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVM---EAV 356
P + + ++ +G +IGKGG I ++Q +G I++ E
Sbjct: 251 LAGSQLRTANPANRAQQQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEERE 310
Query: 357 SGTEDRLIVISGPAHPDD 374
G DR I ISG +PD
Sbjct: 311 GGNTDRTITISG--NPDS 326
>gi|397470081|ref|XP_003806662.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 3 [Pan paniscus]
gi|179479866|gb|ACB86625.1| insulin-like 2 growth factor 2-binding protein 2 [Homo sapiens]
Length = 542
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 111/501 (22%), Positives = 198/501 (39%), Gaps = 126/501 (25%)
Query: 14 DDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIM--------FRVLCPVSKIDGVIGKDG 65
D+ + P+ +++Q+ GD+S + + PGG R+L P + +IGK+G
Sbjct: 100 DEEVSSPSPPQRAQR--GDHSSREQGHA-PGGTSQARQIDFPLRILVPTQFVGAIIGKEG 156
Query: 66 EMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASV 125
+ I++ T + I R EN+G E V
Sbjct: 157 LTIKNITKQTQSRV-------------------------------DIHRKENSGAAEKPV 185
Query: 126 ADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSS 185
+ EG+ +A ++ E M + ET++A++
Sbjct: 186 TIHA-------TPEGT---------------SEACRMILEIMQKEADETKLAEE------ 217
Query: 186 KFVLRLLVLSTQVGCLLGKGGCVIKQID-----KLPTCALAS------DEVVQITGEVDT 234
L++L + VG L+GK G +K+I+ K+ +L + + + G V+
Sbjct: 218 -IPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEA 276
Query: 235 VRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVA------ 288
A I +L + D ++ ++ +P ++S+ G ++TG ++
Sbjct: 277 CASAEIEIMKKLREAFENDMLAV----NQQANLIPGLNLSALGI-FSTGLSVLSPPAGPR 331
Query: 289 -----------DIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGA 337
H S+ H+ G PE L + VG +IGK GA
Sbjct: 332 GAPPAAPYHPFTTHSGYFSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGA 391
Query: 338 IIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPD 396
I+ L + G IK+ A +R+++I+GP +A + Q RI + +
Sbjct: 392 HIKQLARFAGASIKIAPAEGPDVSERMVIITGPP----------EAQFKAQGRIFGKLKE 441
Query: 397 ------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASEN 450
E + + V S+ G ++GKGG + E++ L+ A + I+ +DQ P EN
Sbjct: 442 ENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP---DEN 497
Query: 451 EEVVL-INGEFEAVQEALFQI 470
EEV++ I G F A Q A +I
Sbjct: 498 EEVIVRIIGHFFASQTAQRKI 518
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 141/343 (41%), Gaps = 55/343 (16%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV-MEAVSGTEDRLIVISGPAHPDDRIS 377
R+L + VG +IGK G I+++ ++T + + + SG ++ + I A P+
Sbjct: 139 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIH--ATPEGTSE 196
Query: 378 APQDAVLRV------QTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLS 431
A + +L + +T++A IP ++L + +G L+GK G + ++ +
Sbjct: 197 ACR-MILEIMQKEADETKLAEEIP--------LKILAHNGLVGRLIGKEGRNLKKIEHET 247
Query: 432 GAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLN 491
G I I + E + + G EA A +I +LR F D ++N+ N
Sbjct: 248 GTKITISSLQDL--SIYNPERTITVKGTVEACASAEIEIMKKLREAFENDML-AVNQQAN 304
Query: 492 PTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHI 551
I LS G++S G PP +HP HS + +
Sbjct: 305 ------------LIPGLNLSALGIFSTGLSVLSPPAGPRGAPPAAPYHPFTTHSGYFSSL 352
Query: 552 HRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRR-VPVVVPRSLVPIIQGEDGAC 610
+ PH +GP FP P + V + +P V I G+ GA
Sbjct: 353 Y-----PH----HQFGP-----------FPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAH 392
Query: 611 LKQIRQISDAKITITDPK-PGATETVIIISGTPEQTHAAQSLI 652
+KQ+ + + A I I + P +E ++II+G PE AQ I
Sbjct: 393 IKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI 435
>gi|441656325|ref|XP_004093124.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein Nova-2
[Nomascus leucogenys]
Length = 500
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 90/177 (50%), Gaps = 28/177 (15%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA---VSGTEDRLIVISGPAHPDDR 375
++L G +IGKGG I L++ETG IK+ ++ GT +R+ ++ G A +
Sbjct: 69 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 128
Query: 376 ISA---------PQDA-------VLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGK 419
+ + PQ +L+ QT + PD +Q +L+V ++ G ++GK
Sbjct: 129 VHSFIAEKVREIPQAMTKPEVVNILQPQTTMN---PDRAKQA---KLIVPNSTAGLIIGK 182
Query: 420 GGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRH 476
GG+ + + + SGA++++ Q P+ + E VV ++GE E V +A+ I +++
Sbjct: 183 GGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQE 236
>gi|388854780|emb|CCF51673.1| related to PBP2-PAB1 binding protein [Ustilago hordei]
Length = 446
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 86/181 (47%), Gaps = 22/181 (12%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
++ R L +IGK G I ++ ++ + + E + G +R++ +SGP
Sbjct: 140 ISMRTLIVTSDASIIIGKSGKHINEIRDKSNARLNISEIIPGNPERILTVSGPL------ 193
Query: 377 SAPQDAVLRVQTRIARAIPDN--------REQTVMTRLLVASNQIGCLLGKGGSIIAEMR 428
DAV + I R I D ++V R +V ++++G ++GK GS I E++
Sbjct: 194 ----DAVSKAFGLIVRRINDEPFDQPSVPGSKSVTIRFIVPNSRMGSVIGKQGSKIKEIQ 249
Query: 429 KLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINR 488
+ SGA + G+ +P E V+ I+G +AV A++ + T L H R+A R
Sbjct: 250 EASGARL-TAGEAMLPGST---ERVLSISGVADAVHIAVYYVGTILLEHQDRNANNLAYR 305
Query: 489 P 489
P
Sbjct: 306 P 306
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 104/234 (44%), Gaps = 31/234 (13%)
Query: 156 VQKALLLVFERMVEVEPETEVADQENTKSSKFV-LRLLVLSTQVGCLLGKGGCVIKQIDK 214
V KA L+ R+ + E DQ + SK V +R +V ++++G ++GK G IK+I +
Sbjct: 196 VSKAFGLIVRRIND-----EPFDQPSVPGSKSVTIRFIVPNSRMGSVIGKQGSKIKEIQE 250
Query: 215 LPTCALASDE---------VVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPT--G 263
L + E V+ I+G D V A+ + LL++ R+ ++ PT G
Sbjct: 251 ASGARLTAGEAMLPGSTERVLSISGVADAVHIAVYYVGTILLEHQDRNANNLAYRPTAGG 310
Query: 264 PS--HPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRL 321
PS P P + ++ P+ G P + P T ++
Sbjct: 311 PSTRPPAPANPYAAAQQPFGYGAHAPPFAGAAAPAVGAGAGAPQL------PPGSQTQQI 364
Query: 322 LCHDERVGGVIGKGGAIIRSLKQETGCDIKVME------AVSGTEDRLIVISGP 369
++ VG +IGKGG+ I ++ + IK+ME A G +RL+ I+GP
Sbjct: 365 FIPNDLVGCIIGKGGSKINEIRSMSASQIKIMEPGAGIAAGGGGNERLVTITGP 418
Score = 43.1 bits (100), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 405 RLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILG-KDQIPKCASENEEVVLINGEFEAV 463
++ + ++ +GC++GKGGS I E+R +S + I+I+ I NE +V I G +
Sbjct: 363 QIFIPNDLVGCIIGKGGSKINEIRSMSASQIKIMEPGAGIAAGGGGNERLVTITGPPPNI 422
Query: 464 QEALFQITTRLRHHFFRDA 482
Q A+ + RL R A
Sbjct: 423 QMAVSLLYQRLEQEKMRLA 441
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 46/93 (49%), Gaps = 9/93 (9%)
Query: 176 VADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKLPTCALASDEVV--------Q 227
V D T++++ +R L++++ ++GK G I +I L E++
Sbjct: 129 VGDSSETQATQISMRTLIVTSDASIIIGKSGKHINEIRDKSNARLNISEIIPGNPERILT 188
Query: 228 ITGEVDTVRKALKLISHQLLDNSPRDHESIPGN 260
++G +D V KA LI ++ D P D S+PG+
Sbjct: 189 VSGPLDAVSKAFGLIVRRIND-EPFDQPSVPGS 220
>gi|326674258|ref|XP_003200102.1| PREDICTED: RNA-binding protein Nova-1 isoform 2 [Danio rerio]
Length = 517
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 40/215 (18%)
Query: 282 TGHR-DVADIHLP-MPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAII 339
TG R + A IH P I FHE G E ++L G +IGKGG I
Sbjct: 51 TGDRCNQAAIHDPPFSSDIVGFHEEG---------EYF-LKVLIPSYAAGSIIGKGGQTI 100
Query: 340 RSLKQETGCDIKVMEA---VSGTEDRLIVISGPAHPDDRI---------SAPQDA----- 382
L++ETG IK+ ++ GT +R+ +I G + + PQ A
Sbjct: 101 VQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNNVHDFIAEKVREMPQSAQKTEP 160
Query: 383 --VLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGK 440
+L+ QT + PD +Q +L+V ++ G ++GKGG+ + + + SGA++++
Sbjct: 161 VSILQPQTTVN---PDRVKQA---KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL--- 211
Query: 441 DQIPKCASENEEVVLINGEFEAVQEALFQITTRLR 475
Q P + E VV I+GE E ++A+ I +++
Sbjct: 212 SQKPDGINLQERVVTISGEPEQNRKAVEIIVQKIQ 246
Score = 42.7 bits (99), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 110/251 (43%), Gaps = 62/251 (24%)
Query: 44 GGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEET---VSGSDERLVVIEASDN 100
G +VL P +IGK G+ + Q+ ++TG TI++ ++ G+ ER+ +I+ +
Sbjct: 76 GEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTV- 134
Query: 101 KKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKAL 160
E+ N D + E M S ++T
Sbjct: 135 ---------------------------EALNNVHDFIAEKVREMP--QSAQKT------- 158
Query: 161 LLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIK---------- 210
E + ++P+T V + + K +K L+V ++ G ++GKGG +K
Sbjct: 159 ----EPVSILQPQTTV-NPDRVKQAK----LIVPNSTAGLIIGKGGATVKAVMEQSGAWV 209
Query: 211 QIDKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPD 270
Q+ + P + VV I+GE + RKA+++I ++ ++ P+ + + + S P+ +
Sbjct: 210 QLSQKPDGINLQERVVTISGEPEQNRKAVEIIVQKIQED-PQSSSCLNISYSNISGPVAN 268
Query: 271 HSVSSQGAPYA 281
+ + G+PYA
Sbjct: 269 SNPT--GSPYA 277
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 591 VPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPK---PGATETVIIISGTPEQTHA 647
V + VP +LV I G+ G L + ++++ A+I I+ PG + I+G+P T A
Sbjct: 434 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGSPAATQA 493
Query: 648 AQSLIQAFVMSE 659
AQ LI + E
Sbjct: 494 AQYLISQRITYE 505
Score = 40.0 bits (92), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Query: 403 MTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQ-IPKCASENEEVVLINGEFE 461
+ + V N +G +LGKGG + E ++L+GA I+I K + +P + N +V I G
Sbjct: 433 VVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVP--GTRNRKVT-ITGSPA 489
Query: 462 AVQEALFQITTRLRH 476
A Q A + I+ R+ +
Sbjct: 490 ATQAAQYLISQRITY 504
>gi|302406408|ref|XP_003001040.1| Poly(rC)-binding protein [Verticillium albo-atrum VaMs.102]
gi|261360298|gb|EEY22726.1| Poly(rC)-binding protein [Verticillium albo-atrum VaMs.102]
Length = 359
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 84/175 (48%), Gaps = 25/175 (14%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT R + + G +IGKGG + L+ ETG V + V G DR++ I+G
Sbjct: 47 LTLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTITGGC------ 100
Query: 377 SAPQDAVLRVQTRIARAIPDNREQTVM-----------TRLLVASNQIGCLLGKGGSIIA 425
+A+ R +A+A+ + M +LL++ NQ+G ++G+ G I
Sbjct: 101 ----EAISRAYAIVAQALLEGAPSLGMGGVPQSNGTHPIKLLISHNQMGTIIGRQGLKIK 156
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFR 480
++ +SG + + K+ +P+ E +V + G + ++ A+++I+ L + R
Sbjct: 157 HIQDVSGVRM-VAQKEMLPQ---STERIVEVQGTPDGIRAAIWEISKCLVDDWQR 207
>gi|77736071|ref|NP_001029734.1| heterogeneous nuclear ribonucleoprotein K [Bos taurus]
gi|426219903|ref|XP_004004157.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 1
[Ovis aries]
gi|426219905|ref|XP_004004158.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 2
[Ovis aries]
gi|426224282|ref|XP_004006301.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Ovis
aries]
gi|426256846|ref|XP_004022048.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 1
[Ovis aries]
gi|108860777|sp|Q3T0D0.1|HNRPK_BOVIN RecName: Full=Heterogeneous nuclear ribonucleoprotein K;
Short=hnRNP K
gi|74354615|gb|AAI02451.1| Heterogeneous nuclear ribonucleoprotein K [Bos taurus]
gi|296484523|tpg|DAA26638.1| TPA: heterogeneous nuclear ribonucleoprotein K [Bos taurus]
Length = 464
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 97/443 (21%), Positives = 156/443 (35%), Gaps = 101/443 (22%)
Query: 301 FHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTE 360
E R + + E++ R+L + G VIGKGG I++L+ + + V ++ SG E
Sbjct: 27 MEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDS-SGPE 85
Query: 361 DRLIVISGPAH-----------------------PDDRISAPQDAVLRVQTRIARAIPDN 397
R++ IS ++ DAV + + + +
Sbjct: 86 -RILSISADIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFD 144
Query: 398 REQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLIN 457
E RLL+ + G ++G G+ I E+R+ + I++ + C + VVLI
Sbjct: 145 CE----LRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQE----CCPQSTDRVVLIG 196
Query: 458 GEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSPFPSF---IGRRELSPPG 514
G+ + V E + I + + +P +P F D+ + F R P G
Sbjct: 197 GKPDRVVECIKIILDLISESPIKGR----AQPYDPNFYDETYDYGGFTMMFDDRRGRPVG 252
Query: 515 MYSNFGPSFHKF-DAVGGPPPPGSFHPHDDHSAF-------------------------- 547
F + GG P P S +DD S
Sbjct: 253 FPMRGRGGFDRMPPGRGGRPMPPSRRDYDDMSPRRGPPPPPPGRGGRGGSRARNLPLPPP 312
Query: 548 -------MHHIHRPGMPPHMPD--------------MKPWGPQGLMEVGGPMGFPDF--- 583
+ R G P D + W P P G +
Sbjct: 313 PPPRGGDLMAYDRRGRPGDRYDGMVGFSADETWDSAIDTWSPSEWQMAYEPQGGSGYDYS 372
Query: 584 ----------VGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATE 633
+G P V +P+ L I G+ G +KQIR S A I I +P G+ +
Sbjct: 373 YAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSED 432
Query: 634 TVIIISGTPEQTHAAQSLIQAFV 656
+I I+GT +Q AQ L+Q V
Sbjct: 433 RIITITGTQDQIQNAQYLLQNSV 455
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 38/63 (60%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
I +V P +IGK G+ + QI ++G +I+++E + GS++R++ I + ++ + +
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNA 447
Query: 106 ENL 108
+ L
Sbjct: 448 QYL 450
>gi|390177068|ref|XP_003736271.1| GA30025, isoform E [Drosophila pseudoobscura pseudoobscura]
gi|388858895|gb|EIM52344.1| GA30025, isoform E [Drosophila pseudoobscura pseudoobscura]
Length = 548
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 90/187 (48%), Gaps = 23/187 (12%)
Query: 329 GGVIGKGGAIIRSLKQETGCDIKVMEA---VSGTEDRLIVISGPAHP--------DDRIS 377
G +IGKGG I SL+++TG +K+ ++ GT +R+ +I+G D+I
Sbjct: 56 GAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMVVLDFIMDKIR 115
Query: 378 APQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRI 437
D ++ I +E+ ++LV ++ G ++GKGG+ I ++++ SG+Y++I
Sbjct: 116 EKPDLTTKI---IDAESKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEDSGSYVQI 172
Query: 438 LGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQ 497
Q PK S E + I G+ E + A I +++ P LN ++ D
Sbjct: 173 ---SQKPKDVSLQERCITIIGDKENNKNACKMILSKIVED------PQSGTCLNVSYADV 223
Query: 498 VSPFPSF 504
P +F
Sbjct: 224 SGPVANF 230
>gi|390177062|ref|XP_003736268.1| GA30025, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388858892|gb|EIM52341.1| GA30025, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 714
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 90/187 (48%), Gaps = 23/187 (12%)
Query: 329 GGVIGKGGAIIRSLKQETGCDIKVMEA---VSGTEDRLIVISGPAHP--------DDRIS 377
G +IGKGG I SL+++TG +K+ ++ GT +R+ +I+G D+I
Sbjct: 254 GAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMVVLDFIMDKIR 313
Query: 378 APQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRI 437
D ++ I +E+ ++LV ++ G ++GKGG+ I ++++ SG+Y++I
Sbjct: 314 EKPDLTTKI---IDAESKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEDSGSYVQI 370
Query: 438 LGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQ 497
Q PK S E + I G+ E + A I +++ P LN ++ D
Sbjct: 371 ---SQKPKDVSLQERCITIIGDKENNKNACKMILSKIVED------PQSGTCLNVSYADV 421
Query: 498 VSPFPSF 504
P +F
Sbjct: 422 SGPVANF 428
>gi|332215037|ref|XP_003256643.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 6 [Nomascus leucogenys]
Length = 542
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 111/501 (22%), Positives = 198/501 (39%), Gaps = 126/501 (25%)
Query: 14 DDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIM--------FRVLCPVSKIDGVIGKDG 65
D+ + P+ +++Q+ GD+S + + PGG R+L P + +IGK+G
Sbjct: 100 DEEVSSPSPPQRAQR--GDHSSREQGHA-PGGTSQARQIDFPLRILVPTQFVGAIIGKEG 156
Query: 66 EMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASV 125
+ I++ T + I R EN+G E V
Sbjct: 157 LTIKNITKQTQSRV-------------------------------DIHRKENSGAAEKPV 185
Query: 126 ADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSS 185
+ EG+ +A ++ E M + ET++A++
Sbjct: 186 TIHA-------TPEGT---------------SEACRMILEIMQKEADETKLAEE------ 217
Query: 186 KFVLRLLVLSTQVGCLLGKGGCVIKQID-----KLPTCALAS------DEVVQITGEVDT 234
L++L + VG L+GK G +K+I+ K+ +L + + + G V+
Sbjct: 218 -IPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEA 276
Query: 235 VRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVAD----- 289
A I +L + D ++ ++ +P ++S+ G ++TG ++
Sbjct: 277 CASAEIEIMKKLREAFENDMLAV----NQQANLIPGLNLSALGI-FSTGLSVLSPPAGPR 331
Query: 290 ------------IHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGA 337
H S+ H+ G PE L + VG +IGK GA
Sbjct: 332 GAPPAAPYHPFATHSGYFSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGA 391
Query: 338 IIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPD 396
I+ L + G IK+ A +R+++I+GP +A + Q RI + +
Sbjct: 392 HIKQLARFAGASIKIAPAEGPDVSERMVIITGPP----------EAQFKAQGRIFGKLKE 441
Query: 397 ------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASEN 450
E + + V S+ G ++GKGG + E++ L+ A + I+ +DQ P EN
Sbjct: 442 ENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP---DEN 497
Query: 451 EEVVL-INGEFEAVQEALFQI 470
EEV++ I G F A Q A +I
Sbjct: 498 EEVIVRIIGHFFASQTAQRKI 518
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 141/343 (41%), Gaps = 55/343 (16%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV-MEAVSGTEDRLIVISGPAHPDDRIS 377
R+L + VG +IGK G I+++ ++T + + + SG ++ + I A P+
Sbjct: 139 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIH--ATPEGTSE 196
Query: 378 APQDAVLRV------QTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLS 431
A + +L + +T++A IP ++L + +G L+GK G + ++ +
Sbjct: 197 ACR-MILEIMQKEADETKLAEEIP--------LKILAHNGLVGRLIGKEGRNLKKIEHET 247
Query: 432 GAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLN 491
G I I + E + + G EA A +I +LR F D ++N+ N
Sbjct: 248 GTKITISSLQDL--SIYNPERTITVKGTVEACASAEIEIMKKLREAFENDML-AVNQQAN 304
Query: 492 PTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHI 551
I LS G++S G PP +HP HS + +
Sbjct: 305 ------------LIPGLNLSALGIFSTGLSVLSPPAGPRGAPPAAPYHPFATHSGYFSSL 352
Query: 552 HRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRR-VPVVVPRSLVPIIQGEDGAC 610
+ PH +GP FP P + V + +P V I G+ GA
Sbjct: 353 Y-----PH----HQFGP-----------FPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAH 392
Query: 611 LKQIRQISDAKITITDPK-PGATETVIIISGTPEQTHAAQSLI 652
+KQ+ + + A I I + P +E ++II+G PE AQ I
Sbjct: 393 IKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI 435
>gi|148665207|gb|EDK97623.1| insulin-like growth factor 2 mRNA binding protein 2, isoform CRA_d
[Mus musculus]
Length = 603
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 93/394 (23%), Positives = 154/394 (39%), Gaps = 72/394 (18%)
Query: 268 LPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDER 327
+PD VSS P HR H P S ++ +D P R+L +
Sbjct: 166 IPDEEVSSPSPP----HRAREQGHGPGSSS-----QARQIDFP--------LRILVPTQF 208
Query: 328 VGGVIGKGGAIIRSLKQETGCDIKV-MEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRV 386
VG +IGK G I+++ ++T + + + SG ++ + I A P+ A + +L +
Sbjct: 209 VGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIH--ATPEGTSEACR-MILEI 265
Query: 387 ------QTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGK 440
+T++A +P ++L + +G L+GK G + ++ +G I I
Sbjct: 266 MQKEADETKLAEEVP--------LKILAHNGFVGRLIGKEGRNLKKIEHETGTKITISSL 317
Query: 441 DQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSP 500
+ E + + G EA A +I +LR F D ++N+ N +S
Sbjct: 318 QDL--SIYNPERTITVRGTIEACANAEIEIMKKLREAFENDML-AVNQQANLIPGLNLSA 374
Query: 501 FPSF-IGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPH 559
F G L PP GP G PP +HP HS + ++
Sbjct: 375 LGIFSTGLSVLPPPA-----GPR--------GVPPSPPYHPFATHSGYFSSLYPHHHFGP 421
Query: 560 MPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISD 619
P + P V + +P V I G+ GA +KQ+ + +
Sbjct: 422 FPHHHSY-------------------PEQETVSLFIPTQAVGAIIGKKGAHIKQLARFAG 462
Query: 620 AKITITDPK-PGATETVIIISGTPEQTHAAQSLI 652
A I I + P +E ++II+G PE AQ I
Sbjct: 463 ASIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI 496
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 106/462 (22%), Positives = 178/462 (38%), Gaps = 121/462 (26%)
Query: 48 FRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSEN 107
R+L P + +IGK+G + I++ T +
Sbjct: 200 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRV---------------------------- 231
Query: 108 LEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERM 167
I R EN+G E V + EG+ +A ++ E M
Sbjct: 232 ---DIHRKENSGAAEKPVTIHA-------TPEGT---------------SEACRMILEIM 266
Query: 168 VEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQID-----KLPTCALAS 222
+ ET++A++ L++L + VG L+GK G +K+I+ K+ +L
Sbjct: 267 QKEADETKLAEE-------VPLKILAHNGFVGRLIGKEGRNLKKIEHETGTKITISSLQD 319
Query: 223 ------DEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQ 276
+ + + G ++ A I +L + D ++ ++ +P ++S+
Sbjct: 320 LSIYNPERTITVRGTIEACANAEIEIMKKLREAFENDMLAV----NQQANLIPGLNLSAL 375
Query: 277 GA--------PYATGHRDVADIHLPMPPSIPKFHESGVLD------------RPKPSPEI 316
G P G R V P PP P SG PE
Sbjct: 376 GIFSTGLSVLPPPAGPRGVP----PSPPYHPFATHSGYFSSLYPHHHFGPFPHHHSYPEQ 431
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDR 375
T L + VG +IGK GA I+ L + G IK+ A +R+++I+GP
Sbjct: 432 ETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPP----- 486
Query: 376 ISAPQDAVLRVQTRIARAIPD------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRK 429
+A + Q RI + + E + + V S+ G ++GKGG + E++
Sbjct: 487 -----EAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQN 541
Query: 430 LSGAYIRILGKDQIPKCASENEEVVL-INGEFEAVQEALFQI 470
L+ A + I+ +DQ P ENEEV++ I G F A Q A +I
Sbjct: 542 LTSAEV-IVPRDQTP---DENEEVIVRIIGHFFASQTAQRKI 579
>gi|125773159|ref|XP_001357838.1| GA30025, isoform A [Drosophila pseudoobscura pseudoobscura]
gi|54637571|gb|EAL26973.1| GA30025, isoform A [Drosophila pseudoobscura pseudoobscura]
Length = 570
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 90/187 (48%), Gaps = 23/187 (12%)
Query: 329 GGVIGKGGAIIRSLKQETGCDIKVMEA---VSGTEDRLIVISGPAHP--------DDRIS 377
G +IGKGG I SL+++TG +K+ ++ GT +R+ +I+G D+I
Sbjct: 78 GAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMVVLDFIMDKIR 137
Query: 378 APQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRI 437
D ++ I +E+ ++LV ++ G ++GKGG+ I ++++ SG+Y++I
Sbjct: 138 EKPDLTTKI---IDAESKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEDSGSYVQI 194
Query: 438 LGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQ 497
Q PK S E + I G+ E + A I +++ P LN ++ D
Sbjct: 195 ---SQKPKDVSLQERCITIIGDKENNKNACKMILSKIVED------PQSGTCLNVSYADV 245
Query: 498 VSPFPSF 504
P +F
Sbjct: 246 SGPVANF 252
>gi|74215286|dbj|BAE41861.1| unnamed protein product [Mus musculus]
Length = 530
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 105/458 (22%), Positives = 176/458 (38%), Gaps = 121/458 (26%)
Query: 48 FRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSEN 107
R+L P + +IGK+G + I++ T +
Sbjct: 127 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRV---------------------------- 158
Query: 108 LEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERM 167
I R EN+G E V + EG+ +A ++ E M
Sbjct: 159 ---DIHRKENSGAAEKPVTIHA-------TPEGT---------------SEACRMILEIM 193
Query: 168 VEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQID-----KLPTCALAS 222
+ ET++A++ L++L + VG L+GK G +K+I+ K+ +L
Sbjct: 194 QKEADETKLAEE-------VPLKILAHNGFVGRLIGKEGRNLKKIEHETGTKITISSLQD 246
Query: 223 ------DEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQ 276
+ + + G ++ A I +L + D ++ ++ +P ++S+
Sbjct: 247 LSIYNPERTITVRGTIEACANAEIEIMKKLREAFENDMLAV----NQQANLIPGLNLSAL 302
Query: 277 GA--------PYATGHRDVADIHLPMPPSIPKFHESGVLD------------RPKPSPEI 316
G P G R V P PP P SG PE
Sbjct: 303 GIFSTGLSVLPPPAGPRGVP----PSPPYHPFATHSGYFSSLYPHHHFGPFPHHHSYPEQ 358
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDR 375
T L + VG +IGK GA I+ L + G IK+ A +R+++I+GP
Sbjct: 359 ETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPP----- 413
Query: 376 ISAPQDAVLRVQTRIARAIPD------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRK 429
+A + Q RI + + E + + V S+ G ++GKGG + E++
Sbjct: 414 -----EAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQN 468
Query: 430 LSGAYIRILGKDQIPKCASENEEVVL-INGEFEAVQEA 466
L+ A + I+ +DQ P ENEEV++ I G F A Q A
Sbjct: 469 LTSAEV-IVPRDQTP---DENEEVIVRIIGHFFASQTA 502
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 93/394 (23%), Positives = 154/394 (39%), Gaps = 72/394 (18%)
Query: 268 LPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDER 327
+PD VSS P HR H P S ++ +D P R+L +
Sbjct: 93 IPDEEVSSPSPP----HRAREQGHGPGSSS-----QARQIDFP--------LRILVPTQF 135
Query: 328 VGGVIGKGGAIIRSLKQETGCDIKV-MEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRV 386
VG +IGK G I+++ ++T + + + SG ++ + I A P+ A + +L +
Sbjct: 136 VGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIH--ATPEGTSEACR-MILEI 192
Query: 387 ------QTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGK 440
+T++A +P ++L + +G L+GK G + ++ +G I I
Sbjct: 193 MQKEADETKLAEEVP--------LKILAHNGFVGRLIGKEGRNLKKIEHETGTKITISSL 244
Query: 441 DQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSP 500
+ E + + G EA A +I +LR F D ++N+ N +S
Sbjct: 245 QDL--SIYNPERTITVRGTIEACANAEIEIMKKLREAFENDML-AVNQQANLIPGLNLSA 301
Query: 501 FPSF-IGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPH 559
F G L PP GP G PP +HP HS + ++
Sbjct: 302 LGIFSTGLSVLPPPA-----GPR--------GVPPSPPYHPFATHSGYFSSLYPHHHFGP 348
Query: 560 MPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISD 619
P + P V + +P V I G+ GA +KQ+ + +
Sbjct: 349 FPHHHSY-------------------PEQETVSLFIPTQAVGAIIGKKGAHIKQLARFAG 389
Query: 620 AKITITDPK-PGATETVIIISGTPEQTHAAQSLI 652
A I I + P +E ++II+G PE AQ I
Sbjct: 390 ASIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI 423
>gi|148665206|gb|EDK97622.1| insulin-like growth factor 2 mRNA binding protein 2, isoform CRA_c
[Mus musculus]
Length = 543
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 93/394 (23%), Positives = 154/394 (39%), Gaps = 72/394 (18%)
Query: 268 LPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDER 327
+PD VSS P HR H P S ++ +D P R+L +
Sbjct: 106 IPDEEVSSPSPP----HRAREQGHGPGSSS-----QARQIDFP--------LRILVPTQF 148
Query: 328 VGGVIGKGGAIIRSLKQETGCDIKV-MEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRV 386
VG +IGK G I+++ ++T + + + SG ++ + I A P+ A + +L +
Sbjct: 149 VGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIH--ATPEGTSEACR-MILEI 205
Query: 387 ------QTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGK 440
+T++A +P ++L + +G L+GK G + ++ +G I I
Sbjct: 206 MQKEADETKLAEEVP--------LKILAHNGFVGRLIGKEGRNLKKIEHETGTKITISSL 257
Query: 441 DQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSP 500
+ E + + G EA A +I +LR F D ++N+ N +S
Sbjct: 258 QDL--SIYNPERTITVRGTIEACANAEIEIMKKLREAFENDML-AVNQQANLIPGLNLSA 314
Query: 501 FPSF-IGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPH 559
F G L PP GP G PP +HP HS + ++
Sbjct: 315 LGIFSTGLSVLPPPA-----GPR--------GVPPSPPYHPFATHSGYFSSLYPHHHFGP 361
Query: 560 MPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISD 619
P + P V + +P V I G+ GA +KQ+ + +
Sbjct: 362 FPHHHSY-------------------PEQETVSLFIPTQAVGAIIGKKGAHIKQLARFAG 402
Query: 620 AKITITDPK-PGATETVIIISGTPEQTHAAQSLI 652
A I I + P +E ++II+G PE AQ I
Sbjct: 403 ASIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI 436
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 106/462 (22%), Positives = 178/462 (38%), Gaps = 121/462 (26%)
Query: 48 FRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSEN 107
R+L P + +IGK+G + I++ T +
Sbjct: 140 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRV---------------------------- 171
Query: 108 LEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERM 167
I R EN+G E V + EG+ +A ++ E M
Sbjct: 172 ---DIHRKENSGAAEKPVTIHA-------TPEGT---------------SEACRMILEIM 206
Query: 168 VEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQID-----KLPTCALAS 222
+ ET++A++ L++L + VG L+GK G +K+I+ K+ +L
Sbjct: 207 QKEADETKLAEE-------VPLKILAHNGFVGRLIGKEGRNLKKIEHETGTKITISSLQD 259
Query: 223 ------DEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQ 276
+ + + G ++ A I +L + D ++ ++ +P ++S+
Sbjct: 260 LSIYNPERTITVRGTIEACANAEIEIMKKLREAFENDMLAV----NQQANLIPGLNLSAL 315
Query: 277 GA--------PYATGHRDVADIHLPMPPSIPKFHESGVLD------------RPKPSPEI 316
G P G R V P PP P SG PE
Sbjct: 316 GIFSTGLSVLPPPAGPRGVP----PSPPYHPFATHSGYFSSLYPHHHFGPFPHHHSYPEQ 371
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDR 375
T L + VG +IGK GA I+ L + G IK+ A +R+++I+GP
Sbjct: 372 ETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPP----- 426
Query: 376 ISAPQDAVLRVQTRIARAIPD------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRK 429
+A + Q RI + + E + + V S+ G ++GKGG + E++
Sbjct: 427 -----EAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQN 481
Query: 430 LSGAYIRILGKDQIPKCASENEEVVL-INGEFEAVQEALFQI 470
L+ A + I+ +DQ P ENEEV++ I G F A Q A +I
Sbjct: 482 LTSAEV-IVPRDQTP---DENEEVIVRIIGHFFASQTAQRKI 519
>gi|367008424|ref|XP_003678712.1| hypothetical protein TDEL_0A01690 [Torulaspora delbrueckii]
gi|359746369|emb|CCE89501.1| hypothetical protein TDEL_0A01690 [Torulaspora delbrueckii]
Length = 430
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 88/385 (22%), Positives = 150/385 (38%), Gaps = 73/385 (18%)
Query: 302 HESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTED 361
HES +D S + R+LC ++ ++G G I +K T I V + V G +
Sbjct: 70 HES--IDGMDNSSRHVHLRMLCLVKQASMIVGHKGENISKIKAVTSTRINVSDNVRGVPE 127
Query: 362 RLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQ------TVMT--RLLVASNQI 413
R++ + G + V + I R+I D + ++M+ LL++ + +
Sbjct: 128 RVVYVRGSC----------ENVAKAFGMIVRSINDRHGEEGYDGNSIMSTINLLISHHLM 177
Query: 414 GCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTR 473
GC++GK GS + E+ +LS A R+ Q + N+ ++ I G +A+ A F I
Sbjct: 178 GCIIGKHGSRLREIEELSAA--RLSASPQ--QLIMSNDRILSITGVADAIHIATFYIGQT 233
Query: 474 LRHHFFRDAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPP 533
+ ++AF S Q SP S + S+ G S K
Sbjct: 234 IMK--CKEAFKS-----KKAIFYQPSPVYSVL-------VNGASHGGYSHQKHH------ 273
Query: 534 PPGSFHPHDDH--SAFMHHIHRPGMPPHMPDMKPW-----GPQGLMEVGGPMGFPDFV-- 584
+HP+D + S + RP M P +P G Q F
Sbjct: 274 ---QYHPNDKYTNSRAGKRVVRPAMMATTPTAQPLPQENNGSQVTYTAAAAANATSFTPS 330
Query: 585 ------------GPPHRRVPVV-----VPRSLVPIIQGEDGACLKQIRQISDAKITITDP 627
PP + + ++ + + V I G++G + I++ + I I DP
Sbjct: 331 FTIPNVRIIDEPAPPAQTMAIIEQEVYIDENYVGNIIGKEGKHINSIKEATGCSIYIADP 390
Query: 628 KPGATETVIIISGTPEQTHAAQSLI 652
G+ E + + GT + AA LI
Sbjct: 391 VEGSLERRLTVKGTSMGSQAAIMLI 415
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 90/452 (19%), Positives = 159/452 (35%), Gaps = 134/452 (29%)
Query: 9 KRPHDDDNHTEPNGKEKSQKLAGDYSENQPSKSFPGG--------------IMFRVLCPV 54
KR DD+ P + Q++ GD+S Q + G + R+LC V
Sbjct: 32 KRVALDDDTELPAVGNEDQRMNGDHSSPQDGEEEHLGSHESIDGMDNSSRHVHLRMLCLV 91
Query: 55 SKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIER 114
+ ++G GE +S+I T I V + V G ER+V + S
Sbjct: 92 KQASMIVGHKGENISKIKAVTSTRINVSDNVRGVPERVVYVRGS---------------- 135
Query: 115 SENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPET 174
EN + + +++ + +G+ +M +N
Sbjct: 136 CENVAKAFGMIVRSINDRHGEEGYDGNSIMSTIN-------------------------- 169
Query: 175 EVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKLPTCALAS---------DEV 225
LL+ +GC++GK G +++I++L L++ D +
Sbjct: 170 ----------------LLISHHLMGCIIGKHGSRLREIEELSAARLSASPQQLIMSNDRI 213
Query: 226 VQITGEVDTVRKALKLISHQLL--DNSPRDHESIPGNPT--------GPSHPLPDHSVSS 275
+ ITG D + A I ++ + + ++I P+ G SH H
Sbjct: 214 LSITGVADAIHIATFYIGQTIMKCKEAFKSKKAIFYQPSPVYSVLVNGASHGGYSHQKHH 273
Query: 276 QGAP---YAT---GHRDVADIHLPMPPS--------------------------IPKFH- 302
Q P Y G R V + P+ P F
Sbjct: 274 QYHPNDKYTNSRAGKRVVRPAMMATTPTAQPLPQENNGSQVTYTAAAAANATSFTPSFTI 333
Query: 303 -ESGVLDRPKPSPE---ILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSG 358
++D P P + I+ + + VG +IGK G I S+K+ TGC I + + V G
Sbjct: 334 PNVRIIDEPAPPAQTMAIIEQEVYIDENYVGNIIGKEGKHINSIKEATGCSIYIADPVEG 393
Query: 359 TEDRLIVISGPAHPDDRISAPQDAVLRVQTRI 390
+ +R + + G + Q A++ + +I
Sbjct: 394 SLERRLTVKGTS------MGSQAAIMLISNKI 419
>gi|327275834|ref|XP_003222677.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Anolis carolinensis]
Length = 576
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 102/455 (22%), Positives = 188/455 (41%), Gaps = 112/455 (24%)
Query: 38 PSKSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEA 97
P K P I R+L P + +IGK+G + I++ T I
Sbjct: 188 PVKQQPVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKI------------------ 229
Query: 98 SDNKKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQ 157
+ R EN G E +++ S +G ++
Sbjct: 230 -------------DVHRKENAGAAEKAISIHSTP-------------EGCSA-------- 255
Query: 158 KALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQID---- 213
A ++ E M + +T+ AD+ L++L + VG L+GK G +K+++
Sbjct: 256 -ACKMILEIMQKEAKDTKTADE-------VPLKILAHNNFVGRLIGKEGRNLKKVEQDTE 307
Query: 214 -KLPTCALAS------DEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSH 266
K+ +L + + + G ++ +A + I ++ + D ++ + SH
Sbjct: 308 TKITISSLQDLTLYNPERTITVKGSIENCCRAEQEIMKKVREAYENDVAAM----SLQSH 363
Query: 267 PLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPS---PEILTFRLLC 323
+P ++++ G A+ + +P PPS SG P S PE T +
Sbjct: 364 LIPGLNLAAVGLFPASSNA------VPPPPS----SVSGAA--PYSSFLPPEQETVHVFI 411
Query: 324 HDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRISAPQDA 382
+ VG +IGK G I+ L + IK+ A + ++ R+++I+GP +A
Sbjct: 412 PAQAVGAIIGKKGQHIKQLSRFASASIKIAPAETPDSKVRMVIITGPP----------EA 461
Query: 383 VLRVQTRIARAIPD------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIR 436
+ Q RI + + E + T + V ++ G ++GKGG + E++ L+ A +
Sbjct: 462 QFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEV- 520
Query: 437 ILGKDQIPKCASENEEVVL-INGEFEAVQEALFQI 470
++ +DQ P ENE+V++ I G F A Q A +I
Sbjct: 521 VVPRDQTP---DENEQVIVKIIGHFYASQMAQRKI 552
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 99/437 (22%), Positives = 160/437 (36%), Gaps = 101/437 (23%)
Query: 226 VQITGEVDTVRKALKLISHQLLDNSPR-----DHESIPGNPTGPSHPLPDHSVSSQGAPY 280
V + T + +KL HQL +++ + D +++ G G + QG+P
Sbjct: 124 VTYSNREQTRQAIMKLNGHQLENHALKVSYIPDEQTVQGAENGRRGGFGNRGAPRQGSPV 183
Query: 281 ATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIR 340
A+G P+ K P + RLL + VG +IGK GA IR
Sbjct: 184 ASG--------APV----------------KQQPVDIPLRLLVPTQYVGAIIGKEGATIR 219
Query: 341 SLKQETGCDIKV--MEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNR 398
++ ++T I V E E + + S P + SA +L + + A+
Sbjct: 220 NITKQTQSKIDVHRKENAGAAEKAISIHSTP----EGCSAACKMILEIMQKEAKDTKTAD 275
Query: 399 EQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLING 458
E V ++L +N +G L+GK G + ++ + + I I + E + + G
Sbjct: 276 E--VPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDL--TLYNPERTITVKG 331
Query: 459 EFEAVQEALFQITTRLRHHFFRD-AFPSINRPLNPTF-LDQVSPFPSFIGRRELSPPGMY 516
E A +I ++R + D A S+ L P L V FP+
Sbjct: 332 SIENCCRAEQEIMKKVREAYENDVAAMSLQSHLIPGLNLAAVGLFPA------------- 378
Query: 517 SNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGG 576
+AV PPPP S V G
Sbjct: 379 --------SSNAV--PPPPSS------------------------------------VSG 392
Query: 577 PMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPK-PGATETV 635
+ F+ P V V +P V I G+ G +KQ+ + + A I I + P + +
Sbjct: 393 AAPYSSFLPPEQETVHVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPAETPDSKVRM 452
Query: 636 IIISGTPEQTHAAQSLI 652
+II+G PE AQ I
Sbjct: 453 VIITGPPEAQFKAQGRI 469
>gi|195128219|ref|XP_002008562.1| GI13561 [Drosophila mojavensis]
gi|193920171|gb|EDW19038.1| GI13561 [Drosophila mojavensis]
Length = 362
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 79/164 (48%), Gaps = 26/164 (15%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RL+ + VG +IGK G I+ ++E+G I + + +R++ +SG
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDG--SCPERIVTVSGTT------ 75
Query: 377 SAPQDAVLRVQTRIARAIPDNREQ----------TVMTRLLVASNQIGCLLGKGGSIIAE 426
+A+ T I + + Q + RL+V ++Q G L+GK GS I E
Sbjct: 76 ----NAIFSAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKE 131
Query: 427 MRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
+R+ +G I++ + +P + E V ++G E + + ++QI
Sbjct: 132 IRQTTGCSIQV-ASEMLP---NSTERAVTLSGSAEQITQCIYQI 171
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 51/88 (57%), Gaps = 5/88 (5%)
Query: 387 QTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKC 446
Q R A A NR Q + V+++ IGC++GKGG+ IAE+R++SGA IRI ++ +
Sbjct: 254 QLRTANA---NRAQQQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEE--RE 308
Query: 447 ASENEEVVLINGEFEAVQEALFQITTRL 474
+ + I+G ++V A + I R+
Sbjct: 309 GGNTDRTITISGNPDSVALAQYLINMRI 336
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 109/256 (42%), Gaps = 40/256 (15%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI 212
T+ + A L+ ++ E ++ D ++ +RL+V ++Q G L+GK G IK+I
Sbjct: 75 TNAIFSAFTLITKKFEEWC--SQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEI 132
Query: 213 DKLPTCAL---------ASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNP-- 261
+ C++ +++ V ++G + + + + I +L++ PR +IP P
Sbjct: 133 RQTTGCSIQVASEMLPNSTERAVTLSGSAEQITQCIYQICLVMLESPPRG-ATIPYRPKP 191
Query: 262 --TGPSHPLPDHSVSSQGAPYATGHRDVAD---------IHLPMPP---------SIPKF 301
TGP + + QG YA ++VA M P ++
Sbjct: 192 QVTGPVILANGQAFTIQGN-YAVPTQEVAKNPLASLAALGLAGMTPASTGGINHTALAAL 250
Query: 302 HESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVM---EAVSG 358
S + + + ++ +G +IGKGG I ++Q +G I++ E G
Sbjct: 251 AGSQLRTANANRAQQQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGG 310
Query: 359 TEDRLIVISGPAHPDD 374
DR I ISG +PD
Sbjct: 311 NTDRTITISG--NPDS 324
>gi|320583120|gb|EFW97336.1| RNA binding protein, putative [Ogataea parapolymorpha DL-1]
Length = 404
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 86/193 (44%), Gaps = 28/193 (14%)
Query: 314 PEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPD 373
P + FR+LC ++GKGG I +K+ + + V E + G +R+I + GPA
Sbjct: 77 PTYVHFRMLCSINETAAIVGKGGETINRIKEMSSARVNVSENLKGIPERVITVRGPA--- 133
Query: 374 DRISAPQDAVLRVQTRIARAI---PDNREQTVMT-----RLLVASNQIGCLLGKGGSIIA 425
+ V + I RAI P N+ TV + +LL IG ++GK G+
Sbjct: 134 -------EYVAKAFGLITRAIMDEPFNQASTVESKQINLKLLFPHTIIGYIIGKRGARFR 186
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRL---RHHFFRDA 482
E+ S A ++ DQI + + ++ I G +A+ A + + + + H +
Sbjct: 187 EIEDNSAAALK--ASDQI--LPASTDRILHITGVADAIHIATYYVAQTVIEHKQHLAKAV 242
Query: 483 F---PSINRPLNP 492
F + N+P P
Sbjct: 243 FYNPANCNQPSTP 255
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 73/371 (19%), Positives = 139/371 (37%), Gaps = 101/371 (27%)
Query: 34 SENQPSKSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLV 93
+ ++P+ P + FR+LC +++ ++GK GE +++I + + + V
Sbjct: 68 THHRPTNDDPTYVHFRMLCSINETAAIVGKGGETINRIKEMSSARVNV------------ 115
Query: 94 VIEASDNKKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKET 153
SENL+ ER +
Sbjct: 116 -----------SENLKGIPERV-------------------------------ITVRGPA 133
Query: 154 SKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQID 213
V KA L+ R + EP + + E S + L+LL T +G ++GK G ++I+
Sbjct: 134 EYVAKAFGLI-TRAIMDEPFNQASTVE---SKQINLKLLFPHTIIGYIIGKRGARFREIE 189
Query: 214 KLPTCAL---------ASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGP 264
AL ++D ++ ITG D + A ++ ++++ +++ NP
Sbjct: 190 DNSAAALKASDQILPASTDRILHITGVADAIHIATYYVAQTVIEHKQHLAKAVFYNPANC 249
Query: 265 SHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSP---------- 314
+ P ++ Y G+ + +P P +S + +P P
Sbjct: 250 NQPSTPVGGNASRMAYGNGYPPQV-MQVPAP-----IMQSPYMGQPVQQPYGQYIPGAAA 303
Query: 315 -----------------EILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS 357
E + + +G VIGKGG ++ ++ TGC +KV + V
Sbjct: 304 GAVAAPVPAPMQAQSGQEKINQDIYVPQMHIGLVIGKGGKNLKDIRTITGCYVKVNDEVP 363
Query: 358 G-TEDRLIVIS 367
G TE +L ++S
Sbjct: 364 GATERKLTLMS 374
>gi|440469758|gb|ELQ38855.1| Poly(rC)-binding protein 3 [Magnaporthe oryzae Y34]
gi|440482264|gb|ELQ62771.1| Poly(rC)-binding protein 3 [Magnaporthe oryzae P131]
Length = 490
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 146/359 (40%), Gaps = 35/359 (9%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
+ R + +IGKGG + ++Q + V + G +R++ +SG D +
Sbjct: 126 IHIRAVISSPEAATIIGKGGENVSKIRQMSSAKCTVSDYQKGAVERILTVSGIV---DAV 182
Query: 377 SAPQDAVLRVQTRIARAIPDN-REQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYI 435
+ ++R + P + +T RLL+ IG ++GKGG+ I E+++ SGA
Sbjct: 183 AKAFGLIIRTLNNEPLSEPSSAHSKTYPLRLLIPHILIGSIIGKGGARIKEIQEASGA-- 240
Query: 436 RILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFL 495
R+ D +SE VV+ G +AV A + + + L D F P +
Sbjct: 241 RLNASDSCLPLSSERSLVVM--GVADAVHIATYYVGSTLLEQL-NDRF---GGPAASAYA 294
Query: 496 DQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFH-------PHDDHSAFM 548
+ + P + G ++ D G P P + P+ + +
Sbjct: 295 TRAGGPVGAVPGGMQVVPYLPQPAGGNYGNRDNYGRRPDPRAGQMPPPAAHPYAPQNPYA 354
Query: 549 HHIHRPGMPPHM-PDMKPWGPQGLMEVGGPMGFPDFVGPPHR----RVP----------V 593
H P +PPH +G G G P G PH+ ++P +
Sbjct: 355 PHQPNPAVPPHYGAQAGAYGAHVPAPHVGHAG-PQVHGAPHQPMHGQMPGPGGASLTQQI 413
Query: 594 VVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLI 652
+P +V I G+ G + +IRQ+S + I I +P+ + E ++ I+GT E A ++
Sbjct: 414 YIPNDMVGAIIGKGGQKINEIRQVSGSVIKINEPQDNSNERLVTITGTEECNRMALYML 472
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 45/74 (60%), Gaps = 5/74 (6%)
Query: 401 TVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEF 460
++ ++ + ++ +G ++GKGG I E+R++SG+ I+I P+ S NE +V I G
Sbjct: 408 SLTQQIYIPNDMVGAIIGKGGQKINEIRQVSGSVIKI----NEPQDNS-NERLVTITGTE 462
Query: 461 EAVQEALFQITTRL 474
E + AL+ + +RL
Sbjct: 463 ECNRMALYMLYSRL 476
Score = 43.1 bits (100), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%)
Query: 310 PKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
P P LT ++ ++ VG +IGKGG I ++Q +G IK+ E + +RL+ I+G
Sbjct: 402 PGPGGASLTQQIYIPNDMVGAIIGKGGQKINEIRQVSGSVIKINEPQDNSNERLVTITG 460
>gi|51472291|gb|AAU04539.1| neurological oncogenic ventral antigen protein [Danio rerio]
Length = 473
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 40/215 (18%)
Query: 282 TGHR-DVADIHLP-MPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAII 339
TG R + A IH P I FHE G E ++L G +IGKGG I
Sbjct: 36 TGDRCNQAAIHDPPFSSDIVGFHEEG---------EYF-LKVLIPSYAAGSIIGKGGQTI 85
Query: 340 RSLKQETGCDIKVMEA---VSGTEDRLIVISGPAHPDDRI---------SAPQDA----- 382
L++ETG IK+ ++ GT +R+ +I G + + PQ A
Sbjct: 86 VQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNNVHDFIAEKVREMPQSAQKTEP 145
Query: 383 --VLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGK 440
+L+ QT + PD +Q +L+V ++ G ++GKGG+ + + + SGA++++
Sbjct: 146 VSILQPQTTVN---PDRVKQA---KLVVPNSTAGLIIGKGGATVKAVMEQSGAWVQL--- 196
Query: 441 DQIPKCASENEEVVLINGEFEAVQEALFQITTRLR 475
Q P + E VV I+GE E ++A+ I +++
Sbjct: 197 SQKPDGINLQERVVTISGEPEQNRKAVEIIVQKIQ 231
Score = 42.0 bits (97), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 110/251 (43%), Gaps = 62/251 (24%)
Query: 44 GGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEET---VSGSDERLVVIEASDN 100
G +VL P +IGK G+ + Q+ ++TG TI++ ++ G+ ER+ +I+ +
Sbjct: 61 GEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTV- 119
Query: 101 KKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKAL 160
E+ N D + E M S ++T
Sbjct: 120 ---------------------------EALNNVHDFIAEKVREMP--QSAQKT------- 143
Query: 161 LLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIK---------- 210
E + ++P+T V + + K +K L+V ++ G ++GKGG +K
Sbjct: 144 ----EPVSILQPQTTV-NPDRVKQAK----LVVPNSTAGLIIGKGGATVKAVMEQSGAWV 194
Query: 211 QIDKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPD 270
Q+ + P + VV I+GE + RKA+++I ++ ++ P+ + + + S P+ +
Sbjct: 195 QLSQKPDGINLQERVVTISGEPEQNRKAVEIIVQKIQED-PQSSSCLNISYSNISGPVAN 253
Query: 271 HSVSSQGAPYA 281
+ + G+PYA
Sbjct: 254 SNPT--GSPYA 262
>gi|390177070|ref|XP_003736272.1| GA30025, isoform F [Drosophila pseudoobscura pseudoobscura]
gi|388858896|gb|EIM52345.1| GA30025, isoform F [Drosophila pseudoobscura pseudoobscura]
Length = 800
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 90/187 (48%), Gaps = 23/187 (12%)
Query: 329 GGVIGKGGAIIRSLKQETGCDIKVMEA---VSGTEDRLIVISGPAHP--------DDRIS 377
G +IGKGG I SL+++TG +K+ ++ GT +R+ +I+G D+I
Sbjct: 276 GAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMVVLDFIMDKIR 335
Query: 378 APQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRI 437
D ++ I +E+ ++LV ++ G ++GKGG+ I ++++ SG+Y++I
Sbjct: 336 EKPDLTTKI---IDAESKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEDSGSYVQI 392
Query: 438 LGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQ 497
Q PK S E + I G+ E + A I +++ P LN ++ D
Sbjct: 393 ---SQKPKDVSLQERCITIIGDKENNKNACKMILSKIVED------PQSGTCLNVSYADV 443
Query: 498 VSPFPSF 504
P +F
Sbjct: 444 SGPVANF 450
>gi|238836388|gb|ACR61402.1| IGF-II mRNA-binding protein 2a variant C [Danio rerio]
Length = 453
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 143/326 (43%), Gaps = 68/326 (20%)
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQID-----KLPTCALAS------DEVVQITGEVDTVRK 237
L++L ++ VG L+GK G +K+I+ K+ +L + + + G ++ +
Sbjct: 127 LKILAHNSLVGRLIGKEGRNLKKIEEDTETKITISSLQDLTIYNPERTIIVKGSIEACCR 186
Query: 238 ALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGA--------PYATGHRDVAD 289
A I +L + D +I S+ +P S+S+ G P A G R +
Sbjct: 187 AEVEIMKKLREAYENDVAAI----NQQSNLIPGLSLSALGIFSTGLSVLPPAAGPRGIP- 241
Query: 290 IHLPMPPS-----------------IPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVI 332
P+PP+ +P SG+ + +PE L + VG +I
Sbjct: 242 ---PVPPTGYNPFLGHSSQLGGLYGVPP--ASGISHQHTQAPEQEVVYLFIPTQAVGAII 296
Query: 333 GKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIA 391
GK G I+ L + G IK+ A S R+++I+GP +A + Q RI
Sbjct: 297 GKKGQHIKQLARFAGASIKIAPAESPDVTQRMVIITGPP----------EAQFKAQGRIF 346
Query: 392 RAIPD------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPK 445
+ + E + T + V S+ G ++GKGG + E++ L+ A + I+ +DQ P
Sbjct: 347 GKLKEENFFTAKEEVKLETHIKVPSSAAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP- 404
Query: 446 CASENEEV-VLINGEFEAVQEALFQI 470
EN+EV V I+G F A Q A +I
Sbjct: 405 --DENDEVFVKISGHFFASQTAQRKI 428
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 136/340 (40%), Gaps = 46/340 (13%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQET--GCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
R+L + VG +IGK G I+++ ++T DI E E + + S P
Sbjct: 46 LRMLVPTQFVGAIIGKEGLTIKNITKQTQSKVDIHRKENAGAAEKPITIHSTPEGCSTAC 105
Query: 377 SAPQDAVLR--VQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAY 434
D + + V T++ IP ++L ++ +G L+GK G + ++ + +
Sbjct: 106 HMIMDIMQKEAVDTKVTEDIP--------LKILAHNSLVGRLIGKEGRNLKKIEEDTETK 157
Query: 435 IRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTF 494
I I + E +++ G EA A +I +LR + D +IN+ N
Sbjct: 158 ITISSLQDL--TIYNPERTIIVKGSIEACCRAEVEIMKKLREAYEND-VAAINQQSNLIP 214
Query: 495 LDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPP-PPGSFHPHDDHSAFMHHIHR 553
+S F + PP GP G PP PP ++P HS+ + ++
Sbjct: 215 GLSLSALGIFSTGLSVLPPAA----GPR-------GIPPVPPTGYNPFLGHSSQLGGLY- 262
Query: 554 PGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQ 613
G+PP + P V + +P V I G+ G +KQ
Sbjct: 263 -GVPP----------------ASGISHQHTQAPEQEVVYLFIPTQAVGAIIGKKGQHIKQ 305
Query: 614 IRQISDAKITITDPK-PGATETVIIISGTPEQTHAAQSLI 652
+ + + A I I + P T+ ++II+G PE AQ I
Sbjct: 306 LARFAGASIKIAPAESPDVTQRMVIITGPPEAQFKAQGRI 345
>gi|349802451|gb|AEQ16698.1| putative poly(rC)-binding protein 2 isoform g [Pipa carvalhoi]
Length = 207
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 42/202 (20%)
Query: 181 NTKSSK--FVLRLLVLSTQVGCLLGKGGCVIKQI------------DKLPTCALASDEVV 226
+T SSK LRL+V ++Q G L+GKGGC IK+I D LP +++ +
Sbjct: 8 STASSKPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPN---STERAI 64
Query: 227 QITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRD 286
I G ++ + +K I +L++ P+ +IP P S P+ +A G
Sbjct: 65 TIAGIPQSIIECVKQICVVMLESPPKGV-TIPYRPKPSSSPVI----------FAGGAYT 113
Query: 287 VADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQET 346
+ +P P +D S + + L ++ +G +IG+ GA I ++Q +
Sbjct: 114 IQGQAIPQP-----------IDA---SAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMS 159
Query: 347 GCDIKVMEAVSGTEDRLIVISG 368
G IK+ V G+ DR + I+G
Sbjct: 160 GAQIKIANPVEGSTDRQVTITG 181
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 83/187 (44%), Gaps = 36/187 (19%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVM-EAVSGTEDRLIVISG------- 368
+T RL+ + G +IGKGG I+ +++ TG ++V + + + +R I I+G
Sbjct: 16 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIE 75
Query: 369 -------------------PAHPDDRISAPQDAVLRVQTRIARAIP---DNREQTVMTRL 406
P P S+P T +AIP D QT L
Sbjct: 76 CVKQICVVMLESPPKGVTIPYRPKPS-SSPVIFAGGAYTIQGQAIPQPIDASAQTTSHEL 134
Query: 407 LVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEA 466
+ ++ IGC++G+ G+ I E+R++SGA I+I P S + +V I G ++ A
Sbjct: 135 TIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN----PVEGSTDRQVT-ITGSTASISLA 189
Query: 467 LFQITTR 473
+ I R
Sbjct: 190 QYLINVR 196
Score = 42.4 bits (98), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%)
Query: 593 VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLI 652
+ +P L+ I G GA + +IRQ+S A+I I +P G+T+ + I+G+ AQ LI
Sbjct: 134 LTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSTASISLAQYLI 193
Query: 653 QAFVMSE 659
SE
Sbjct: 194 NVRRSSE 200
>gi|426256848|ref|XP_004022049.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 2
[Ovis aries]
Length = 466
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 97/443 (21%), Positives = 156/443 (35%), Gaps = 101/443 (22%)
Query: 301 FHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTE 360
E R + + E++ R+L + G VIGKGG I++L+ + + V ++ SG E
Sbjct: 27 MEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDS-SGPE 85
Query: 361 DRLIVISGPAH-----------------------PDDRISAPQDAVLRVQTRIARAIPDN 397
R++ IS ++ DAV + + + +
Sbjct: 86 -RILSISADIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFD 144
Query: 398 REQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLIN 457
E RLL+ + G ++G G+ I E+R+ + I++ + C + VVLI
Sbjct: 145 CE----LRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQE----CCPQSTDRVVLIG 196
Query: 458 GEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSPFPSF---IGRRELSPPG 514
G+ + V E + I + + +P +P F D+ + F R P G
Sbjct: 197 GKPDRVVECIKIILDLISESPIKGR----AQPYDPNFYDETYDYGGFTMMFDDRRGRPVG 252
Query: 515 MYSNFGPSFHKF-DAVGGPPPPGSFHPHDDHSAF-------------------------- 547
F + GG P P S +DD S
Sbjct: 253 FPMRGRGGFDRMPPGRGGRPMPPSRRDYDDMSPRRGPPPPPPGRGGRGGSRARNLPLPPP 312
Query: 548 -------MHHIHRPGMPPHMPD--------------MKPWGPQGLMEVGGPMGFPDF--- 583
+ R G P D + W P P G +
Sbjct: 313 PPPRGGDLMAYDRRGRPGDRYDGMVGFSADETWDSAIDTWSPSEWQMAYEPQGGSGYDYS 372
Query: 584 ----------VGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATE 633
+G P V +P+ L I G+ G +KQIR S A I I +P G+ +
Sbjct: 373 YAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSED 432
Query: 634 TVIIISGTPEQTHAAQSLIQAFV 656
+I I+GT +Q AQ L+Q V
Sbjct: 433 RIITITGTQDQIQNAQYLLQNSV 455
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 38/63 (60%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
I +V P +IGK G+ + QI ++G +I+++E + GS++R++ I + ++ + +
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNA 447
Query: 106 ENL 108
+ L
Sbjct: 448 QYL 450
>gi|167614344|gb|ABZ89744.1| IGF-II mRNA-binding protein 2a [Danio rerio]
Length = 607
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 143/326 (43%), Gaps = 68/326 (20%)
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQID-----KLPTCALAS------DEVVQITGEVDTVRK 237
L++L ++ VG L+GK G +K+I+ K+ +L + + + G ++ +
Sbjct: 281 LKILAHNSLVGRLIGKEGRNLKKIEEDTETKITISSLQDLTIYNPERTIIVKGSIEACCR 340
Query: 238 ALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGA--------PYATGHRDVAD 289
A I +L + D +I S+ +P S+S+ G P A G R +
Sbjct: 341 AEVEIMKKLREAYENDVAAI----NQQSNLIPGLSLSALGIFSTGLSVLPPAAGPRGIP- 395
Query: 290 IHLPMPPS-----------------IPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVI 332
P+PP+ +P SG+ + +PE L + VG +I
Sbjct: 396 ---PVPPTGYNPFLGHSSQLGGLYGVPP--ASGISHQHTQAPEQEVVYLFIPTQAVGAII 450
Query: 333 GKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIA 391
GK G I+ L + G IK+ A S R+++I+GP +A + Q RI
Sbjct: 451 GKKGQHIKQLARFAGASIKIAPAESPDVTQRMVIITGPP----------EAQFKAQGRIF 500
Query: 392 RAIPD------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPK 445
+ + E + T + V S+ G ++GKGG + E++ L+ A + I+ +DQ P
Sbjct: 501 GKLKEENFFTAKEEVKLETHIKVPSSAAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP- 558
Query: 446 CASENEEV-VLINGEFEAVQEALFQI 470
EN+EV V I+G F A Q A +I
Sbjct: 559 --DENDEVFVKISGHFFASQTAQRKI 582
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 136/340 (40%), Gaps = 46/340 (13%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQET--GCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
R+L + VG +IGK G I+++ ++T DI E E + + S P
Sbjct: 200 LRMLVPTQFVGAIIGKEGLTIKNITKQTQSKVDIHRKENAGAAEKPITIHSTPEGCSTAC 259
Query: 377 SAPQDAVLR--VQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAY 434
D + + V T++ IP ++L ++ +G L+GK G + ++ + +
Sbjct: 260 HMIMDIMQKEAVDTKVTEDIP--------LKILAHNSLVGRLIGKEGRNLKKIEEDTETK 311
Query: 435 IRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTF 494
I I + E +++ G EA A +I +LR + D +IN+ N
Sbjct: 312 ITISSLQDL--TIYNPERTIIVKGSIEACCRAEVEIMKKLREAYENDV-AAINQQSNLIP 368
Query: 495 LDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPP-PPGSFHPHDDHSAFMHHIHR 553
+S F + PP GP G PP PP ++P HS+ + ++
Sbjct: 369 GLSLSALGIFSTGLSVLPPAA----GPR-------GIPPVPPTGYNPFLGHSSQLGGLY- 416
Query: 554 PGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQ 613
G+PP + P V + +P V I G+ G +KQ
Sbjct: 417 -GVPP----------------ASGISHQHTQAPEQEVVYLFIPTQAVGAIIGKKGQHIKQ 459
Query: 614 IRQISDAKITITDPK-PGATETVIIISGTPEQTHAAQSLI 652
+ + + A I I + P T+ ++II+G PE AQ I
Sbjct: 460 LARFAGASIKIAPAESPDVTQRMVIITGPPEAQFKAQGRI 499
>gi|148665204|gb|EDK97620.1| insulin-like growth factor 2 mRNA binding protein 2, isoform CRA_a
[Mus musculus]
Length = 596
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 93/394 (23%), Positives = 154/394 (39%), Gaps = 72/394 (18%)
Query: 268 LPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDER 327
+PD VSS P HR H P S ++ +D P R+L +
Sbjct: 159 IPDEEVSSPSPP----HRAREQGHGPGSSS-----QARQIDFP--------LRILVPTQF 201
Query: 328 VGGVIGKGGAIIRSLKQETGCDIKV-MEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRV 386
VG +IGK G I+++ ++T + + + SG ++ + I A P+ A + +L +
Sbjct: 202 VGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIH--ATPEGTSEACR-MILEI 258
Query: 387 ------QTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGK 440
+T++A +P ++L + +G L+GK G + ++ +G I I
Sbjct: 259 MQKEADETKLAEEVP--------LKILAHNGFVGRLIGKEGRNLKKIEHETGTKITISSL 310
Query: 441 DQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSP 500
+ E + + G EA A +I +LR F D ++N+ N +S
Sbjct: 311 QDL--SIYNPERTITVRGTIEACANAEIEIMKKLREAFENDML-AVNQQANLIPGLNLSA 367
Query: 501 FPSF-IGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPH 559
F G L PP GP G PP +HP HS + ++
Sbjct: 368 LGIFSTGLSVLPPPA-----GPR--------GVPPSPPYHPFATHSGYFSSLYPHHHFGP 414
Query: 560 MPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISD 619
P + P V + +P V I G+ GA +KQ+ + +
Sbjct: 415 FPHHHSY-------------------PEQETVSLFIPTQAVGAIIGKKGAHIKQLARFAG 455
Query: 620 AKITITDPK-PGATETVIIISGTPEQTHAAQSLI 652
A I I + P +E ++II+G PE AQ I
Sbjct: 456 ASIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI 489
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 106/462 (22%), Positives = 178/462 (38%), Gaps = 121/462 (26%)
Query: 48 FRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSEN 107
R+L P + +IGK+G + I++ T +
Sbjct: 193 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRV---------------------------- 224
Query: 108 LEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERM 167
I R EN+G E V + EG+ +A ++ E M
Sbjct: 225 ---DIHRKENSGAAEKPVTIHA-------TPEGT---------------SEACRMILEIM 259
Query: 168 VEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQID-----KLPTCALAS 222
+ ET++A++ L++L + VG L+GK G +K+I+ K+ +L
Sbjct: 260 QKEADETKLAEE-------VPLKILAHNGFVGRLIGKEGRNLKKIEHETGTKITISSLQD 312
Query: 223 ------DEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQ 276
+ + + G ++ A I +L + D ++ ++ +P ++S+
Sbjct: 313 LSIYNPERTITVRGTIEACANAEIEIMKKLREAFENDMLAV----NQQANLIPGLNLSAL 368
Query: 277 GA--------PYATGHRDVADIHLPMPPSIPKFHESGVLD------------RPKPSPEI 316
G P G R V P PP P SG PE
Sbjct: 369 GIFSTGLSVLPPPAGPRGVP----PSPPYHPFATHSGYFSSLYPHHHFGPFPHHHSYPEQ 424
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDR 375
T L + VG +IGK GA I+ L + G IK+ A +R+++I+GP
Sbjct: 425 ETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPP----- 479
Query: 376 ISAPQDAVLRVQTRIARAIPD------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRK 429
+A + Q RI + + E + + V S+ G ++GKGG + E++
Sbjct: 480 -----EAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQN 534
Query: 430 LSGAYIRILGKDQIPKCASENEEVVL-INGEFEAVQEALFQI 470
L+ A + I+ +DQ P ENEEV++ I G F A Q A +I
Sbjct: 535 LTSAEV-IVPRDQTP---DENEEVIVRIIGHFFASQTAQRKI 572
>gi|25012807|gb|AAN71494.1| RE72930p [Drosophila melanogaster]
Length = 580
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 149/332 (44%), Gaps = 40/332 (12%)
Query: 165 ERMVEVEPETEVADQENTKS---SKFVLRLLVLSTQVGCLLGKGGCVIKQI----DKLPT 217
+R++EV + ++ + S S+ L++L + +G ++GK G IK+I D T
Sbjct: 147 KRILEVMQQEAISTNKGELSPECSEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKIT 206
Query: 218 CALASD-------EVVQITGEVDTVRKALKLISHQLLDNSPRDHESI-PGNPTGPS-HPL 268
+ +D ++ + G ++ + +A IS +L + D ++I P + P HP+
Sbjct: 207 VSSINDINSFNLERIITVKGLIENMSRAENQISTKLRQSYENDLQAIAPQSLMFPGLHPM 266
Query: 269 PDHSVSSQGAPYATGHRDVADIHLPMP-PSIPKFHES----GVLDRPKPSPEILTFRLLC 323
S G + T MP PS F S V+ P+ T L
Sbjct: 267 AMMSTPGNGMVFNTS----------MPFPSCQSFAMSKTPASVVPPVFPNDLQETTYLYI 316
Query: 324 HDERVGGVIGKGGAIIRSLKQETGCDIKVM-----EAVSGTEDRLIVISGPAHPDDRISA 378
+ VG +IG G+ IRS+ + + +K+ + + +R + I G P+ + A
Sbjct: 317 PNNAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGT--PEGQWKA 374
Query: 379 PQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRIL 438
+++ D+ TV LLVAS+Q+G ++GKGG + E+++++G+ I++
Sbjct: 375 QYMIFEKMREEGFMCGTDDVRLTV--ELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLP 432
Query: 439 GKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
P + E V I G F +VQ A +I
Sbjct: 433 EHALAPPSGGDEETPVHIIGLFYSVQSAQRRI 464
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 137/352 (38%), Gaps = 78/352 (22%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRIS 377
R+L E VG +IG+ G+ IR++ Q++ + V + G+ ++ I I G +P++ +
Sbjct: 87 LRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENVGSLEKSITIYG--NPENCTN 144
Query: 378 APQDAVLRVQTRIARAIPDNREQT------VMTRLLVASNQIGCLLGKGGSIIAEMRKLS 431
A + +L V + AI N+ + + ++L +N IG ++GK G+ I + + +
Sbjct: 145 ACKR-ILEVMQQ--EAISTNKGELSPECSEICLKILAHNNLIGRIIGKSGNTIKRIMQDT 201
Query: 432 GAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLN 491
I + + I + E ++ + G E + A QI+T+LR + D
Sbjct: 202 DTKITVSSINDI--NSFNLERIITVKGLIENMSRAENQISTKLRQSYEND---------- 249
Query: 492 PTFLDQVSP----FPSFIGRRELSPP--GMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHS 545
L ++P FP +S P GM N F + P S P
Sbjct: 250 ---LQAIAPQSLMFPGLHPMAMMSTPGNGMVFNTSMPFPSCQSFAMSKTPASVVP----- 301
Query: 546 AFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQG 605
P P L E + +P + V I G
Sbjct: 302 -------------------PVFPNDLQET----------------TYLYIPNNAVGAIIG 326
Query: 606 EDGACLKQIRQISDAKITIT-----DPKPGATETVIIISGTPEQTHAAQSLI 652
G+ ++ I + S+A + I P TE + I GTPE AQ +I
Sbjct: 327 TRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGTPEGQWKAQYMI 378
>gi|1083569|pir||A54143 kappa-B motif-binding phosphoprotein - mouse
Length = 464
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 97/443 (21%), Positives = 157/443 (35%), Gaps = 101/443 (22%)
Query: 301 FHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTE 360
E R + + E++ R+L + G VIGKGG I++L+ + + V ++ SG E
Sbjct: 27 MEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDS-SGPE 85
Query: 361 DRLIVISGPAH-----------------------PDDRISAPQDAVLRVQTRIARAIPDN 397
R++ IS ++ DAV + + + +
Sbjct: 86 -RILSISADIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFD 144
Query: 398 REQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLIN 457
E RLL+ + G ++G G+ I E+R+ + I++ + C + VVLI
Sbjct: 145 CE----LRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQE----CCPHSTDRVVLIG 196
Query: 458 GEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSPFPSF---IGRRELSPPG 514
G+ + V E + I + + +P +P F D+ + F R P G
Sbjct: 197 GKPDRVVECIKIILDLISESPIKGR----AQPYDPNFYDETYDYGGFTMMFDDRRGRPVG 252
Query: 515 MYSNFGPSFHKF-DAVGGPPPPGSFHPHDDHSAF-------------------------- 547
F + GG P P S +DD S
Sbjct: 253 FPMRGRGGFDRMPPGRGGRPMPPSRRDYDDMSPRRGPPPPPPGRGGRGGSRARNLPLPPP 312
Query: 548 -------MHHIHRPGMPPHMPD--------------MKPWGPQGLMEVGGPMGFPDF--- 583
+ R G P D ++ W P P G +
Sbjct: 313 PPPRGGDLMAYDRRGRPGDRYDGMVGFSADETWDSAIETWSPSEWQMAYEPQGGSGYDYS 372
Query: 584 ----------VGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATE 633
+G P V +P+ L I G+ G +KQIR S A I I +P G+ +
Sbjct: 373 YAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSED 432
Query: 634 TVIIISGTPEQTHAAQSLIQAFV 656
+I I+GT +Q AQ L+Q V
Sbjct: 433 RIITITGTQDQIQNAQYLLQNSV 455
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 38/63 (60%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
I +V P +IGK G+ + QI ++G +I+++E + GS++R++ I + ++ + +
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNA 447
Query: 106 ENL 108
+ L
Sbjct: 448 QYL 450
>gi|391348567|ref|XP_003748518.1| PREDICTED: poly(rC)-binding protein 3-like [Metaseiulus
occidentalis]
Length = 418
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 82/169 (48%), Gaps = 25/169 (14%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHP---- 372
LT R++ + VG +IGK G I+ ++++G I + + +R++ ++G
Sbjct: 12 LTVRMIMQGKEVGSIIGKKGDNIKKFREDSGAKINISDGT--CPERIVTVTGSTECILKA 69
Query: 373 -----------DDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGG 421
+P ++ L Q + +P V RL+V ++Q G L+GK G
Sbjct: 70 FSLICAKFEEMSSLSGSPTESALNGQ----KVLPGQTPPPVTLRLIVPASQCGSLIGKAG 125
Query: 422 SIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
S I E+R+++GA +++ + +P + E V + G +AV + ++QI
Sbjct: 126 SKIREIREITGASVQV-ASEMLP---NSTERTVTVAGTADAVTKCIYQI 170
Score = 47.4 bits (111), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 5/61 (8%)
Query: 413 IGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITT 472
IGC++GKGG I E+R+LSGA I+I ++ K E V I+G EA+ A + I T
Sbjct: 316 IGCVIGKGGQKINEIRQLSGATIKISSTEEGSK-----ERCVSISGTPEAINLAQYLINT 370
Query: 473 R 473
R
Sbjct: 371 R 371
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 595 VPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLI 652
+P L+ + G+ G + +IRQ+S A I I+ + G+ E + ISGTPE + AQ LI
Sbjct: 311 IPNDLIGCVIGKGGQKINEIRQLSGATIKISSTEEGSKERCVSISGTPEAINLAQYLI 368
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 57/118 (48%), Gaps = 16/118 (13%)
Query: 187 FVLRLLVLSTQVGCLLGKGGCVIKQIDKLPTCAL---------ASDEVVQITGEVDTVRK 237
LRL+V ++Q G L+GK G I++I ++ ++ +++ V + G D V K
Sbjct: 106 VTLRLIVPASQCGSLIGKAGSKIREIREITGASVQVASEMLPNSTERTVTVAGTADAVTK 165
Query: 238 ALKLISHQLLDNSPRDHESIPGNPTGPSHP----LPDHSVSSQGAPYATGHRDVADIH 291
+ I +L+ P+ +IP P P+ P + + QG+ YA H D+ +H
Sbjct: 166 CIYQICCVMLECPPKG-ATIPYRPK-PAMPPVIFAGGQAYTVQGS-YAIPHPDLTKLH 220
>gi|195972875|ref|NP_001108030.2| insulin-like growth factor 2 mRNA-binding protein 2 [Danio rerio]
gi|124021198|gb|ABM88867.1| IGF2 mRNA-binding protein 2 [Danio rerio]
Length = 607
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 143/326 (43%), Gaps = 68/326 (20%)
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQID-----KLPTCALAS------DEVVQITGEVDTVRK 237
L++L ++ VG L+GK G +K+I+ K+ +L + + + G ++ +
Sbjct: 281 LKILAHNSLVGRLIGKEGRNLKKIEEDTETKITISSLQDLTIYNPERTIIVKGSIEACCR 340
Query: 238 ALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGA--------PYATGHRDVAD 289
A I +L + D +I S+ +P S+S+ G P A G R +
Sbjct: 341 AEVEIMKKLREAYENDVAAI----NQQSNLIPGLSLSALGIFSTGLSVLPPAAGPRGIP- 395
Query: 290 IHLPMPPS-----------------IPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVI 332
P+PP+ +P SG+ + +PE L + VG +I
Sbjct: 396 ---PVPPTGYNPFLGHSSQLGGLYGVPP--ASGISHQHTQAPEQEVVYLFIPTQAVGAII 450
Query: 333 GKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIA 391
GK G I+ L + G IK+ A S R+++I+GP +A + Q RI
Sbjct: 451 GKKGQHIKQLARFAGASIKIAPAESPDVTQRMVIITGPP----------EAQFKAQGRIF 500
Query: 392 RAIPD------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPK 445
+ + E + T + V S+ G ++GKGG + E++ L+ A + I+ +DQ P
Sbjct: 501 GKLKEENFFTAKEEVKLETHIKVPSSAAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP- 558
Query: 446 CASENEEV-VLINGEFEAVQEALFQI 470
EN+EV V I+G F A Q A +I
Sbjct: 559 --DENDEVFVKISGHFFASQTAQRKI 582
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 136/340 (40%), Gaps = 46/340 (13%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQET--GCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
R+L + VG +IGK G I+++ ++T DI E E + + S P
Sbjct: 200 LRMLVPTQFVGAIIGKEGLTIKNITKQTQSKVDIHRKENAGAAEKPITIHSTPEGCSTAC 259
Query: 377 SAPQDAVLR--VQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAY 434
D + + V T++ IP ++L ++ +G L+GK G + ++ + +
Sbjct: 260 HMIMDIMQKEAVDTKVTEDIP--------LKILAHNSLVGRLIGKEGRNLKKIEEDTETK 311
Query: 435 IRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTF 494
I I + E +++ G EA A +I +LR + D +IN+ N
Sbjct: 312 ITISSLQDL--TIYNPERTIIVKGSIEACCRAEVEIMKKLREAYENDV-AAINQQSNLIP 368
Query: 495 LDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPP-PPGSFHPHDDHSAFMHHIHR 553
+S F + PP GP G PP PP ++P HS+ + ++
Sbjct: 369 GLSLSALGIFSTGLSVLPPAA----GPR-------GIPPVPPTGYNPFLGHSSQLGGLY- 416
Query: 554 PGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQ 613
G+PP + P V + +P V I G+ G +KQ
Sbjct: 417 -GVPP----------------ASGISHQHTQAPEQEVVYLFIPTQAVGAIIGKKGQHIKQ 459
Query: 614 IRQISDAKITITDPK-PGATETVIIISGTPEQTHAAQSLI 652
+ + + A I I + P T+ ++II+G PE AQ I
Sbjct: 460 LARFAGASIKIAPAESPDVTQRMVIITGPPEAQFKAQGRI 499
>gi|449669385|ref|XP_002157937.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Hydra magnipapillata]
Length = 549
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 129/319 (40%), Gaps = 48/319 (15%)
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQIDK--------------------LPTCALASDE-VVQ 227
L+LL G ++GKGG +KQ + +PT + + E V+
Sbjct: 227 LKLLAHDLLCGRIIGKGGNNLKQTKQESNVSKLIISNSIYEESSQMIPTGFVCTGERVIT 286
Query: 228 ITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLP-----DHSVSSQGAPYAT 282
I G +D + A LIS +L + +D + G H ++ + Q P
Sbjct: 287 IEGSLDAICIAESLISKKLREYMEKDARNQYNTNMGLYHGAAFGGQINYGYNPQMYPRMY 346
Query: 283 GHRDVADIHLPMPPS----IPKFHESGVLDR--PKPSPEILTFR-----LLCHDERVGGV 331
G V P PS P G L P+ P F +L + VG +
Sbjct: 347 GGYTVDTFGYPAYPSSMNNYPGILGHGYLPYTPPQQVPYYSNFEPETTCILIPTKEVGAI 406
Query: 332 IGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIA 391
IG+ G I +KQ +G I+V++ G E ++ ++ GP R S + ++ ++A
Sbjct: 407 IGRNGGYISRMKQYSGAQIRVIKGDEGGESKVEIV-GPPDCQWRASLCVFSKIKETMKVA 465
Query: 392 RAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENE 451
+ E + T +V + +G ++GK G ++ +++ + A I + Q N+
Sbjct: 466 YS-----EAQLKTEFIVPGSCVGRVIGKKGQVVQDIQDKAQADIEVPKDKQ-----GAND 515
Query: 452 EVVLINGEFEAVQEALFQI 470
V I G F Q A+ +I
Sbjct: 516 VPVYITGTFNGTQIAISRI 534
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 129/343 (37%), Gaps = 54/343 (15%)
Query: 314 PEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVME----AVSGTEDRLIV-ISG 368
P+ R+L + V ++GKGG I +++ TG I + G D IV I G
Sbjct: 135 PQQYPCRILVPSDMVKVLLGKGGCTITAMQTNTGTKIDIHRDKGPCYRGPCDETIVTIKG 194
Query: 369 PAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMR 428
P+ A ++ + + D R + + +LL G ++GKGG+ + + +
Sbjct: 195 --DPESFSKAIREILSAFSNEYEKRDTDAR-KPIQLKLLAHDLLCGRIIGKGGNNLKQTK 251
Query: 429 KLSGAYIRILGK-------DQIPK-CASENEEVVLINGEFEAVQEALFQITTRLRHHFFR 480
+ S I+ IP E V+ I G +A+ A I+ +LR + +
Sbjct: 252 QESNVSKLIISNSIYEESSQMIPTGFVCTGERVITIEGSLDAICIAESLISKKLREYMEK 311
Query: 481 DAFPSINRPL----NPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPG 536
DA N + F Q++ G P MY + D G P P
Sbjct: 312 DARNQYNTNMGLYHGAAFGGQIN-----YGYNPQMYPRMYGGY-----TVDTFGYPAYPS 361
Query: 537 SFHPHDDHSAFMHHIHRPGMPP-HMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVV 595
S +++ + H + P PP +P + P+ +++
Sbjct: 362 SM---NNYPGILGHGYLPYTPPQQVPYYSNFEPETTC--------------------ILI 398
Query: 596 PRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIII 638
P V I G +G + +++Q S A+I + G V I+
Sbjct: 399 PTKEVGAIIGRNGGYISRMKQYSGAQIRVIKGDEGGESKVEIV 441
>gi|429859891|gb|ELA34647.1| kh domain rna binding protein [Colletotrichum gloeosporioides Nara
gc5]
Length = 471
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 90/376 (23%), Positives = 155/376 (41%), Gaps = 51/376 (13%)
Query: 315 EILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDD 374
+ + R + VIGKGG + ++++ +G V + G +R++ +SG D
Sbjct: 112 DWIHIRAVISSPEAATVIGKGGENVSNIRKMSGAKCTVSDYQKGAVERILTVSGVV---D 168
Query: 375 RISAPQDAVLRVQTRIARAIPDN-REQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
+ ++R A P + + +T RLL+ IG ++GKGG+ I E+++ SGA
Sbjct: 169 AAAKAFGLIIRTLNNEPLAEPSSAQSKTYPLRLLIPHILIGSIIGKGGARIREIQEASGA 228
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI-TTRLRHHFFRDAFPSINRPLNP 492
R+ D ++E VV+ G +AV A + + +T L R P+ +
Sbjct: 229 --RLNASDSCLPLSTERSLVVM--GVADAVHIATYYVGSTLLEQLNDRFGGPAASAYATR 284
Query: 493 TFLD--------QVSPF---PSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGS--FH 539
+ QV P+ P+ G Y N + DA P +
Sbjct: 285 SGGPAGVVPGGMQVVPYCPQPTT---------GNYGNRENYNRRHDARAQHHLPAAPYAQ 335
Query: 540 PHDDHSAFMHHIHRPGMPPHMPD-----------MKPWGPQGLMEVGG-----PMGFPDF 583
P+ H A + P MP H M+P + + G PM
Sbjct: 336 PYPGHHAAQPN---PAMPIHYGAAQAGGYGAAAPMQPHAGAAVPQPHGAHPAQPMHGGAM 392
Query: 584 VGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPE 643
G P + + +P +V I G+ G + +IRQIS + I I +P+ + E ++ I+GT E
Sbjct: 393 PGAPLTQQ-IYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQDNSNERLVTITGTEE 451
Query: 644 QTHAAQSLIQAFVMSE 659
A ++ + + SE
Sbjct: 452 CNRMALYMLYSRLESE 467
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 9/91 (9%)
Query: 10 RPHDDDNHTEPNGKEKSQKLAGDYSENQPSKSFPGG-IMFRVLCPVSKIDGVIGKDGEMM 68
+PH +P+G +Q + G + PG + ++ P + +IGK G+ +
Sbjct: 368 QPHAGAAVPQPHGAHPAQPMHGG--------AMPGAPLTQQIYIPNDMVGAIIGKGGQKI 419
Query: 69 SQISQDTGVTIRVEETVSGSDERLVVIEASD 99
++I Q +G I++ E S+ERLV I ++
Sbjct: 420 NEIRQISGSVIKINEPQDNSNERLVTITGTE 450
>gi|392513715|ref|NP_001254774.1| heterogeneous nuclear ribonucleoprotein K [Sus scrofa]
Length = 463
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 97/443 (21%), Positives = 156/443 (35%), Gaps = 101/443 (22%)
Query: 301 FHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTE 360
E R + + E++ R+L + G VIGKGG I++L+ + + V ++ SG E
Sbjct: 27 MEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDS-SGPE 85
Query: 361 DRLIVISGPAH-----------------------PDDRISAPQDAVLRVQTRIARAIPDN 397
R++ IS ++ DAV + + + +
Sbjct: 86 -RILSISADIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFD 144
Query: 398 REQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLIN 457
E RLL+ + G ++G G+ I E+R+ + I++ + C + VVLI
Sbjct: 145 CE----LRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQE----CCPQSTDRVVLIG 196
Query: 458 GEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSPFPSF---IGRRELSPPG 514
G+ + V E + I + + +P +P F D+ + F R P G
Sbjct: 197 GKPDRVVECIKIILDLISESPIKGR----AQPYDPNFYDETYDYGGFTMMFDDRRGRPVG 252
Query: 515 MYSNFGPSFHKF-DAVGGPPPPGSFHPHDDHSAF-------------------------- 547
F + GG P P S +DD S
Sbjct: 253 FPMRGRGGFDRMPPGRGGRPMPPSRRDYDDMSPRRGPPPPPPGRGGRGGSRARNLPLPPP 312
Query: 548 -------MHHIHRPGMPPHMPD--------------MKPWGPQGLMEVGGPMGFPDF--- 583
+ R G P D + W P P G +
Sbjct: 313 PPPRGGDLMAYDRRGRPGDRYDGMVGFSADETWDSAIDTWSPSEWQMAYEPQGGSGYDYS 372
Query: 584 ----------VGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATE 633
+G P V +P+ L I G+ G +KQIR S A I I +P G+ +
Sbjct: 373 YAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSED 432
Query: 634 TVIIISGTPEQTHAAQSLIQAFV 656
+I I+GT +Q AQ L+Q V
Sbjct: 433 RIITITGTQDQIQNAQYLLQNSV 455
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 38/63 (60%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
I +V P +IGK G+ + QI ++G +I+++E + GS++R++ I + ++ + +
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNA 447
Query: 106 ENL 108
+ L
Sbjct: 448 QYL 450
>gi|331232797|ref|XP_003329060.1| hypothetical protein PGTG_10800 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309308050|gb|EFP84641.1| hypothetical protein PGTG_10800 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 378
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 80/164 (48%), Gaps = 22/164 (13%)
Query: 315 EILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDD 374
+ + R L + +IGKGG I +++++G + EAV G +R++ ++GP
Sbjct: 104 QTIQMRALIVTQDASIIIGKGGRHINEVREKSGARATISEAVPGNAERILSVAGPL---- 159
Query: 375 RISAPQDAVLRVQTRIARAIPDN--------REQTVMTRLLVASNQIGCLLGKGGSIIAE 426
DAV + I R I D + V R +V ++++G ++GK GS I E
Sbjct: 160 ------DAVSKAFGLIVRRINDEPFDVPSVPGSRAVTIRFIVPNSRMGSVIGKAGSKIKE 213
Query: 427 MRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
++ +SGA R+ + + E V+ I+G +AV A++ +
Sbjct: 214 IQDMSGA--RVQASEAL--LPGSTERVLSISGVADAVHIAVYYV 253
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 312 PSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA-VSGTEDRLIVISGPA 370
P +T R + + R+G VIGK G+ I+ ++ +G ++ EA + G+ +R++ ISG A
Sbjct: 184 PGSRAVTIRFIVPNSRMGSVIGKAGSKIKEIQDMSGARVQASEALLPGSTERVLSISGVA 243
>gi|116007842|ref|NP_001036619.1| mushroom-body expressed, isoform D [Drosophila melanogaster]
gi|113194920|gb|ABI31266.1| mushroom-body expressed, isoform D [Drosophila melanogaster]
Length = 539
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 79/164 (48%), Gaps = 26/164 (15%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RL+ + VG +IGK G I+ ++E+G I + + +R++ +SG
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDG--SCPERIVTVSGTT------ 75
Query: 377 SAPQDAVLRVQTRIARAIPDNREQ----------TVMTRLLVASNQIGCLLGKGGSIIAE 426
+A+ T I + + Q + RL+V ++Q G L+GK GS I E
Sbjct: 76 ----NAIFSAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKE 131
Query: 427 MRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
+R+ +G I++ + +P + E V ++G E + + ++QI
Sbjct: 132 IRQTTGCSIQV-ASEMLP---NSTERAVTLSGSAEQITQCIYQI 171
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 96/222 (43%), Gaps = 40/222 (18%)
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQIDKLPTCAL---------ASDEVVQITGEVDTVRKAL 239
+RL+V ++Q G L+GK G IK+I + C++ +++ V ++G + + + +
Sbjct: 109 IRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPNSTERAVTLSGSAEQITQCI 168
Query: 240 KLISHQLLDNSPRDHESIPGNP----TGPSHPLPDHSVSSQGAPYATGHRDVAD------ 289
I +L++ PR +IP P TGP + + QG YA ++VA
Sbjct: 169 YQICLVMLESPPRG-ATIPYRPKPQVTGPVILANGQAFTIQG-NYAVPTQEVAKNPLASL 226
Query: 290 ----IHLPMPPSIPKFHESGVL----------DRPKPSPEILTFRLLCHDERVGGVIGKG 335
+ P S + + L P + + ++ +G +IGKG
Sbjct: 227 AALGLAGMNPASTGGINHTAALAALAGSQLRTANPANRAQQQQHEMTVSNDLIGCIIGKG 286
Query: 336 GAIIRSLKQETGCDIKVM---EAVSGTEDRLIVISGPAHPDD 374
G I ++Q +G I++ E G DR I ISG +PD
Sbjct: 287 GTKIAEIRQISGAMIRISNCEEREGGNTDRTITISG--NPDS 326
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 53/94 (56%), Gaps = 4/94 (4%)
Query: 377 SAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIR 436
+A A+ Q R A P NR Q + V+++ IGC++GKGG+ IAE+R++SGA IR
Sbjct: 245 TAALAALAGSQLRTAN--PANRAQQQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIR 302
Query: 437 ILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
I ++ + + + I+G ++V A + I
Sbjct: 303 ISNCEE--REGGNTDRTITISGNPDSVALAQYLI 334
>gi|402886179|ref|XP_003906515.1| PREDICTED: poly(rC)-binding protein 2 [Papio anubis]
Length = 340
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 72/123 (58%), Gaps = 7/123 (5%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTNAIFKA 71
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I+ ++ ++ + V RL+V ++Q G L+GKGG I E+R+++ A
Sbjct: 72 FA--MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIREVTEA 129
Query: 434 YIR 436
++
Sbjct: 130 ALK 132
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 109/258 (42%), Gaps = 46/258 (17%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T +S+ LRL+V ++Q G L+GKGGC IK
Sbjct: 65 TNAIFKAFAMIIDKL---EEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 211 QIDKLPTCAL---------------ASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHE 255
+I ++ AL + + V I + Q ++ D
Sbjct: 122 EIREVTEAALKPYLFLFFSPLTLSQSPPKGVTIPYRPKPSSSPVIFAGGQDRYSTGSDSA 181
Query: 256 SIPG-------NPTGPSHPLPDHSVSSQGAPYATGHRDVADIH-LPMPPS-IPKFH-ESG 305
S P NP PL +++ Q YA D+ +H L M S P H +G
Sbjct: 182 SFPHTTPSMCLNPDLEGPPLEAYTIQGQ---YAIPQPDLTKLHQLAMQQSHFPMTHGNTG 238
Query: 306 VLDRPKPSPEILTF-------------RLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV 352
SPE+ + L ++ +G +IG+ GA I ++Q +G IK+
Sbjct: 239 FSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI 298
Query: 353 MEAVSGTEDRLIVISGPA 370
V G+ DR + I+G A
Sbjct: 299 ANPVEGSTDRQVTITGSA 316
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%)
Query: 593 VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLI 652
+ +P L+ I G GA + +IRQ+S A+I I +P G+T+ + I+G+ AQ LI
Sbjct: 267 LTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLI 326
Query: 653 QAFVMSET 660
+ SET
Sbjct: 327 NVRLSSET 334
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 396 DNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVL 455
D QT L + ++ IGC++G+ G+ I E+R++SGA I+I P S + +V
Sbjct: 257 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN----PVEGSTDRQVT- 311
Query: 456 INGEFEAVQEALFQITTRL 474
I G ++ A + I RL
Sbjct: 312 ITGSAASISLAQYLINVRL 330
>gi|24641097|ref|NP_727451.1| IGF-II mRNA-binding protein, isoform D [Drosophila melanogaster]
gi|24641099|ref|NP_727452.1| IGF-II mRNA-binding protein, isoform E [Drosophila melanogaster]
gi|24641101|ref|NP_727453.1| IGF-II mRNA-binding protein, isoform F [Drosophila melanogaster]
gi|24641103|ref|NP_727454.1| IGF-II mRNA-binding protein, isoform G [Drosophila melanogaster]
gi|24641105|ref|NP_727455.1| IGF-II mRNA-binding protein, isoform H [Drosophila melanogaster]
gi|22832052|gb|AAN09269.1| IGF-II mRNA-binding protein, isoform D [Drosophila melanogaster]
gi|22832053|gb|AAN09270.1| IGF-II mRNA-binding protein, isoform E [Drosophila melanogaster]
gi|22832054|gb|AAN09271.1| IGF-II mRNA-binding protein, isoform F [Drosophila melanogaster]
gi|22832055|gb|AAN09272.1| IGF-II mRNA-binding protein, isoform G [Drosophila melanogaster]
gi|22832056|gb|AAN09273.1| IGF-II mRNA-binding protein, isoform H [Drosophila melanogaster]
Length = 573
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 143/321 (44%), Gaps = 39/321 (12%)
Query: 175 EVADQE--NTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI----DKLPTCALASD----- 223
EV QE +T + L++L + +G ++GK G IK+I D T + +D
Sbjct: 151 EVMQQEAISTNKGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDINSFN 210
Query: 224 --EVVQITGEVDTVRKALKLISHQLLDNSPRDHESI-PGNPTGPS-HPLPDHSVSSQGAP 279
++ + G ++ + +A IS +L + D +++ P + P HP+ S G
Sbjct: 211 LERIITVKGLIENMSRAENQISTKLRQSYENDLQAMAPQSLMFPGLHPMAMMSTPGNGMV 270
Query: 280 YATGHRDVADIHLPMP-PSIPKFHES----GVLDRPKPSPEILTFRLLCHDERVGGVIGK 334
+ T MP PS F S V+ P+ T L + VG +IG
Sbjct: 271 FNTS----------MPFPSCQSFAMSKTPASVVPPVFPNDLQETTYLYIPNNAVGAIIGT 320
Query: 335 GGAIIRSLKQETGCDIKVM-----EAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTR 389
G+ IRS+ + + +K+ + + +R + I G P+ + A +++
Sbjct: 321 RGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGT--PEGQWKAQYMIFEKMREE 378
Query: 390 IARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASE 449
D+ TV LLVAS+Q+G ++GKGG + E+++++G+ I++ P +
Sbjct: 379 GFMCGTDDVRLTV--ELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLPEHALAPPSGGD 436
Query: 450 NEEVVLINGEFEAVQEALFQI 470
E V I G F +VQ A +I
Sbjct: 437 EETPVHIIGLFYSVQSAQRRI 457
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 136/342 (39%), Gaps = 65/342 (19%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRIS 377
R+L E VG +IG+ G+ IR++ Q++ + V + G+ ++ I I G +P++ +
Sbjct: 87 LRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENVGSLEKSITIYG--NPENCTN 144
Query: 378 APQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRI 437
A + + +Q AI N+ + + ++L +N IG ++GK G+ I + + + I +
Sbjct: 145 ACKRILEVMQ---QEAISTNKGEICL-KILAHNNLIGRIIGKSGNTIKRIMQDTDTKITV 200
Query: 438 LGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQ 497
+ I + E ++ + G E + A QI+T+LR + D + + P L
Sbjct: 201 SSINDI--NSFNLERIITVKGLIENMSRAENQISTKLRQSYENDL-----QAMAPQSL-- 251
Query: 498 VSPFPSFIGRRELSPP--GMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPG 555
FP +S P GM N F + P S P
Sbjct: 252 --MFPGLHPMAMMSTPGNGMVFNTSMPFPSCQSFAMSKTPASVVP--------------- 294
Query: 556 MPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIR 615
P P L E + +P + V I G G+ ++ I
Sbjct: 295 ---------PVFPNDLQET----------------TYLYIPNNAVGAIIGTRGSHIRSIM 329
Query: 616 QISDAKITIT-----DPKPGATETVIIISGTPEQTHAAQSLI 652
+ S+A + I P TE + I GTPE AQ +I
Sbjct: 330 RFSNASLKIAPLDADKPLDQQTERKVTIVGTPEGQWKAQYMI 371
>gi|332856422|ref|XP_524310.3| PREDICTED: RNA-binding protein Nova-2 [Pan troglodytes]
Length = 607
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 90/177 (50%), Gaps = 28/177 (15%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA---VSGTEDRLIVISGPAHPDDR 375
++L G +IGKGG I L++ETG IK+ ++ GT +R+ ++ G A +
Sbjct: 150 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 209
Query: 376 ISA---------PQDA-------VLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGK 419
+ + PQ +L+ QT + PD +Q +L+V ++ G ++GK
Sbjct: 210 VHSFIAEKVREIPQAMTKPEVVNILQPQTTMN---PDRAKQ---AKLIVPNSTAGLIIGK 263
Query: 420 GGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRH 476
GG+ + + + SGA++++ Q P+ + E VV ++GE E V +A+ I +++
Sbjct: 264 GGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQE 317
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 591 VPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPK---PGATETVIIISGTPEQTHA 647
V + VP +LV I G+ G L + ++++ A+I I+ PG + I+G+P T A
Sbjct: 524 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQA 583
Query: 648 AQSLIQAFVMSE 659
AQ LI V E
Sbjct: 584 AQYLISQRVTYE 595
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 403 MTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEA 462
+ + V N +G +LGKGG + E ++L+GA I+I K + V I G A
Sbjct: 523 LVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEF--LPGTRNRRVTITGSPAA 580
Query: 463 VQEALFQITTRLRHH 477
Q A + I+ R+ +
Sbjct: 581 TQAAQYLISQRVTYE 595
Score = 39.3 bits (90), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
Query: 395 PDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRI-LGKDQIPKCASENEEV 453
P E ++L+ S G ++GKGG I +++K +GA I++ KD P E V
Sbjct: 141 PKTEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYP---GTTERV 197
Query: 454 VLINGEFEAVQEALFQITTRLRH 476
L+ G EA+ I ++R
Sbjct: 198 CLVQGTAEALNAVHSFIAEKVRE 220
>gi|426243970|ref|XP_004015811.1| PREDICTED: RNA-binding protein Nova-2 [Ovis aries]
Length = 255
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 90/177 (50%), Gaps = 28/177 (15%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA---VSGTEDRLIVISGPAHPDDR 375
++L G +IGKGG I L++ETG IK+ ++ GT +R+ ++ G A +
Sbjct: 16 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 75
Query: 376 ISA---------PQDA-------VLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGK 419
+ + PQ +L+ QT + PD +Q +L+V ++ G ++GK
Sbjct: 76 VHSFIAEKVREIPQAMTKPEVVNILQPQTTMN---PDRAKQA---KLIVPNSTAGLIIGK 129
Query: 420 GGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRH 476
GG+ + + + SGA++++ Q P+ + E VV ++GE E V +A+ I +++
Sbjct: 130 GGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQE 183
>gi|195394077|ref|XP_002055672.1| GJ18657 [Drosophila virilis]
gi|194150182|gb|EDW65873.1| GJ18657 [Drosophila virilis]
Length = 650
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 143/321 (44%), Gaps = 39/321 (12%)
Query: 175 EVADQE--NTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI----DKLPTCALASD----- 223
EV QE +T + L++L + +G ++GK G IK+I D T + +D
Sbjct: 209 EVMQQEALSTNKGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDINSFN 268
Query: 224 --EVVQITGEVDTVRKALKLISHQLLDNSPRDHESI-PGNPTGPS-HPLPDHSVSSQGAP 279
++ + G ++ + +A IS +L + D +++ P + P HP+ S G
Sbjct: 269 LERIITVKGLIENMSRAENQISTKLRQSYENDLQAMAPQSLMFPGLHPMAMMSTPGNGMV 328
Query: 280 YATGHRDVADIHLPMP-PSIPKFHES----GVLDRPKPSPEILTFRLLCHDERVGGVIGK 334
+ T MP PS F S V+ P+ T L + VG +IG
Sbjct: 329 FNTS----------MPFPSCQSFAMSKTPASVVPPAFPNDMQETTYLYIPNNAVGAIIGT 378
Query: 335 GGAIIRSLKQETGCDIKVM-----EAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTR 389
G+ IRS+ + + +K+ + + +R + I G P+ + A +++
Sbjct: 379 KGSHIRSIMRFSSASLKIAPLDADKPLDQQTERKVTIVGT--PEGQWKAQYMIFEKMREE 436
Query: 390 IARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASE 449
D+ TV LLVAS+Q+G ++GKGG + E+++++G+ I++ P +
Sbjct: 437 GFMCGTDDVRLTV--ELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLPEHALAPPSGGD 494
Query: 450 NEEVVLINGEFEAVQEALFQI 470
E V I G F +VQ A +I
Sbjct: 495 EETPVHIIGPFYSVQSAQRRI 515
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 136/342 (39%), Gaps = 65/342 (19%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRIS 377
R+L E VG +IG+ G+ IR++ Q++ + V + G+ ++ I I G +P++ +
Sbjct: 145 LRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENVGSLEKSITIYG--NPENCTN 202
Query: 378 APQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRI 437
A + +L V + A+ N+ + + ++L +N IG ++GK G+ I + + + I +
Sbjct: 203 ACKR-ILEVMQQ--EALSTNKGEICL-KILAHNNLIGRIIGKSGNTIKRIMQDTDTKITV 258
Query: 438 LGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQ 497
+ I + E ++ + G E + A QI+T+LR + D + + P L
Sbjct: 259 SSINDI--NSFNLERIITVKGLIENMSRAENQISTKLRQSYENDL-----QAMAPQSL-- 309
Query: 498 VSPFPSFIGRRELSPP--GMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPG 555
FP +S P GM N F + P S P P
Sbjct: 310 --MFPGLHPMAMMSTPGNGMVFNTSMPFPSCQSFAMSKTPASVVP-------------PA 354
Query: 556 MPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIR 615
P M + + +P + V I G G+ ++ I
Sbjct: 355 FPNDMQET---------------------------TYLYIPNNAVGAIIGTKGSHIRSIM 387
Query: 616 QISDAKITIT-----DPKPGATETVIIISGTPEQTHAAQSLI 652
+ S A + I P TE + I GTPE AQ +I
Sbjct: 388 RFSSASLKIAPLDADKPLDQQTERKVTIVGTPEGQWKAQYMI 429
>gi|195350752|ref|XP_002041902.1| GM11285 [Drosophila sechellia]
gi|194123707|gb|EDW45750.1| GM11285 [Drosophila sechellia]
Length = 566
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 143/321 (44%), Gaps = 39/321 (12%)
Query: 175 EVADQE--NTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI----DKLPTCALASD----- 223
EV QE +T + L++L + +G ++GK G IK+I D T + +D
Sbjct: 144 EVMQQEAISTNKGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDINSFN 203
Query: 224 --EVVQITGEVDTVRKALKLISHQLLDNSPRDHESI-PGNPTGPS-HPLPDHSVSSQGAP 279
++ + G ++ + +A IS +L + D +++ P + P HP+ S G
Sbjct: 204 LERIITVKGLIENMSRAENQISTKLRQSYENDLQAMAPQSLMFPGLHPMAMMSTPGNGMV 263
Query: 280 YATGHRDVADIHLPMP-PSIPKFHES----GVLDRPKPSPEILTFRLLCHDERVGGVIGK 334
+ T MP PS F S V+ P+ T L + VG +IG
Sbjct: 264 FNTS----------MPFPSCQSFAMSKTPASVVPPVFPNDLQETTYLYIPNNAVGAIIGT 313
Query: 335 GGAIIRSLKQETGCDIKVM-----EAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTR 389
G+ IRS+ + + +K+ + + +R + I G P+ + A +++
Sbjct: 314 KGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGT--PEGQWKAQYMIFEKMREE 371
Query: 390 IARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASE 449
D+ TV LLVAS+Q+G ++GKGG + E+++++G+ I++ P +
Sbjct: 372 GFMCGTDDVRLTV--ELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLPEHALAPPSGGD 429
Query: 450 NEEVVLINGEFEAVQEALFQI 470
E V I G F +VQ A +I
Sbjct: 430 EETPVHIIGLFYSVQSAQRRI 450
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 136/342 (39%), Gaps = 65/342 (19%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRIS 377
R+L E VG +IG+ G+ IR++ Q++ + V + G+ ++ I I G +P++ +
Sbjct: 80 LRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENVGSLEKSITIYG--NPENCTN 137
Query: 378 APQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRI 437
A + + +Q AI N+ + + ++L +N IG ++GK G+ I + + + I +
Sbjct: 138 ACKRILEVMQ---QEAISTNKGEICL-KILAHNNLIGRIIGKSGNTIKRIMQDTDTKITV 193
Query: 438 LGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQ 497
+ I + E ++ + G E + A QI+T+LR + D + + P L
Sbjct: 194 SSINDI--NSFNLERIITVKGLIENMSRAENQISTKLRQSYENDL-----QAMAPQSLM- 245
Query: 498 VSPFPSFIGRRELSPP--GMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPG 555
FP +S P GM N F + P S P
Sbjct: 246 ---FPGLHPMAMMSTPGNGMVFNTSMPFPSCQSFAMSKTPASVVP--------------- 287
Query: 556 MPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIR 615
P P L E + +P + V I G G+ ++ I
Sbjct: 288 ---------PVFPNDLQET----------------TYLYIPNNAVGAIIGTKGSHIRSIM 322
Query: 616 QISDAKITIT-----DPKPGATETVIIISGTPEQTHAAQSLI 652
+ S+A + I P TE + I GTPE AQ +I
Sbjct: 323 RFSNASLKIAPLDADKPLDQQTERKVTIVGTPEGQWKAQYMI 364
>gi|332215033|ref|XP_003256641.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 4 [Nomascus leucogenys]
gi|397470079|ref|XP_003806661.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 2 [Pan paniscus]
gi|179479950|gb|ACB86627.1| insulin-like 2 growth factor 2-binding protein 2 [Homo sapiens]
Length = 493
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 110/484 (22%), Positives = 188/484 (38%), Gaps = 135/484 (27%)
Query: 14 DDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIM--------FRVLCPVSKIDGVIGKDG 65
D+ + P+ +++Q+ GD+S + + PGG R+L P + +IGK+G
Sbjct: 94 DEEVSSPSPPQRAQR--GDHSSREQGHA-PGGTSQARQIDFPLRILVPTQFVGAIIGKEG 150
Query: 66 EMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASV 125
+ I++ T + I R EN+G E V
Sbjct: 151 LTIKNITKQTQSRV-------------------------------DIHRKENSGAAEKPV 179
Query: 126 ADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSS 185
+ EG+ +A ++ E M + ET++A++
Sbjct: 180 TIHA-------TPEGT---------------SEACRMILEIMQKEADETKLAEE------ 211
Query: 186 KFVLRLLVLSTQVGCLLGKGGCVIKQID-----KLPTCALAS------DEVVQITGEVDT 234
L++L + VG L+GK G +K+I+ K+ +L + + + G V+
Sbjct: 212 -IPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEA 270
Query: 235 VRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPM 294
A I +L + D ++ + S P H Q P+
Sbjct: 271 CASAEIEIMKKLREAFENDMLAVNTHSGYFSSLYPHH----QFGPF-------------- 312
Query: 295 PPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVME 354
P H P EI+ L + VG +IGK GA I+ L + G IK+
Sbjct: 313 ----PHHHSY-------PEQEIVN--LFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAP 359
Query: 355 AVS-GTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPD------NREQTVMTRLL 407
A +R+++I+GP +A + Q RI + + E + +
Sbjct: 360 AEGPDVSERMVIITGPP----------EAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIR 409
Query: 408 VASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVL-INGEFEAVQEA 466
V S+ G ++GKGG + E++ L+ A + I+ +DQ P ENEEV++ I G F A Q A
Sbjct: 410 VPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVIVRIIGHFFASQTA 465
Query: 467 LFQI 470
+I
Sbjct: 466 QRKI 469
Score = 38.9 bits (89), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 75/170 (44%), Gaps = 20/170 (11%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV-MEAVSGTEDRLIVISGPAHPDDRIS 377
R+L + VG +IGK G I+++ ++T + + + SG ++ + I A P+
Sbjct: 133 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIH--ATPEGTSE 190
Query: 378 APQDAVLRV------QTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLS 431
A + +L + +T++A IP ++L + +G L+GK G + ++ +
Sbjct: 191 ACR-MILEIMQKEADETKLAEEIP--------LKILAHNGLVGRLIGKEGRNLKKIEHET 241
Query: 432 GAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRD 481
G I I + E + + G EA A +I +LR F D
Sbjct: 242 GTKITISSLQDL--SIYNPERTITVKGTVEACASAEIEIMKKLREAFEND 289
>gi|426217760|ref|XP_004003120.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 1 [Ovis aries]
Length = 599
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 140/343 (40%), Gaps = 55/343 (16%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV-MEAVSGTEDRLIVISGPAHPDDRIS 377
R+L + VG +IGK G I+++ ++T + + + SG ++ + I A P+
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIH--ATPEGTSE 253
Query: 378 APQDAVLRV------QTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLS 431
A + +L + +T++A IP ++L + +G L+GK G + ++ +
Sbjct: 254 ACR-MILEIMQKEADETKLAEEIP--------LKILAHNGLVGRLIGKEGRNLKKIEHET 304
Query: 432 GAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLN 491
G I I + E + + G EA A +I +LR F D + N+ N
Sbjct: 305 GTKITISSLQDL--SIYNPERTITVKGTVEACASAEIEIMKKLREAFENDMLAA-NQQAN 361
Query: 492 PTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHI 551
I LS G++S G PP +HP HS + +
Sbjct: 362 ------------LIPGLNLSALGIFSTGLSVLPPPAGPRGAPPAPPYHPFATHSGYFSSL 409
Query: 552 HRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRR-VPVVVPRSLVPIIQGEDGAC 610
PPH +GP FP P + V + +P V I G+ GA
Sbjct: 410 ----CPPHQ-----FGP-----------FPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAH 449
Query: 611 LKQIRQISDAKITITDPK-PGATETVIIISGTPEQTHAAQSLI 652
+KQ+ + + A I I + P +E ++II+G PE AQ I
Sbjct: 450 IKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI 492
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 83/177 (46%), Gaps = 22/177 (12%)
Query: 302 HESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTE 360
H+ G PE L + VG +IGK GA I+ L + G IK+ A
Sbjct: 413 HQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVS 472
Query: 361 DRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPD------NREQTVMTRLLVASNQIG 414
+R+++I+GP +A + Q RI + + E + + V S+ G
Sbjct: 473 ERMVIITGPP----------EAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAG 522
Query: 415 CLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVL-INGEFEAVQEALFQI 470
++GKGG + E++ L+ A + I+ +DQ P ENEEV++ I G F A Q A +I
Sbjct: 523 RVIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVIVRIIGHFFASQTAQRKI 575
>gi|189188542|ref|XP_001930610.1| Poly(rC)-binding protein 4 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187972216|gb|EDU39715.1| Poly(rC)-binding protein 4 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 364
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 78/359 (21%), Positives = 137/359 (38%), Gaps = 64/359 (17%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT R + + G +IGK G + L+ ETG V + V G DR++ ++G +
Sbjct: 45 LTLRAIVSSKEAGVIIGKAGKNVADLRDETGVRAGVSKVVQGVHDRVLSVTGSLSGISKA 104
Query: 377 SA-PQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYI 435
+L + + T RLL++ NQ+G ++G+ G I +++ SG +
Sbjct: 105 YGLAAKGLLEGAPAMGMGGVIRTDGTHPIRLLISHNQMGTIIGRQGLKIKQIQDASGVRM 164
Query: 436 RILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPL----- 490
+ K+ +P+ E +V + G +++A+++I L R + P+
Sbjct: 165 -VAQKEMLPQS---TERIVEVQGSPAGIEKAVWEIGKCLIDDHERGYGTVLYNPVVRVQP 220
Query: 491 --NPTFLDQVSPFPS-FIGRRELSPPGMYSNFG---PSFHK---FDAVGGPPPPGSFHPH 541
P L PS +G R + G ++F P+F + DA PPPP H
Sbjct: 221 GAGPGPLSNGGSAPSGSMGGRSYNRTGHGADFSDSPPAFSRRSGSDAASRPPPP--THTE 278
Query: 542 DDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVP 601
D +I +P +V
Sbjct: 279 DGEEMQTQNIS------------------------------------------IPSDMVG 296
Query: 602 IIQGEDGACLKQIRQISDAKITITD-PKPGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
I G G + +IR+ S+A+I+I P E + I+G+ A L+ + +E
Sbjct: 297 CIIGRGGTKISEIRKTSNARISIAKAPHDDTGERMFTITGSASANEKALYLLYENLEAE 355
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 110/251 (43%), Gaps = 35/251 (13%)
Query: 154 SKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQID 213
S + KA L + ++E P + T + +RLL+ Q+G ++G+ G IKQI
Sbjct: 99 SGISKAYGLAAKGLLEGAPAMGMGGVIRTDGT-HPIRLLISHNQMGTIIGRQGLKIKQIQ 157
Query: 214 KLPTCAL---------ASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNP--- 261
+ +++ +V++ G + KA+ I L+D+ R + ++ NP
Sbjct: 158 DASGVRMVAQKEMLPQSTERIVEVQGSPAGIEKAVWEIGKCLIDDHERGYGTVLYNPVVR 217
Query: 262 ----TGPSHPLPDH----SVSSQGAPY-ATGH-RDVADIHLPMPPSIPKFHESGVLDRPK 311
GP PL + S S G Y TGH D +D PP+ + S RP
Sbjct: 218 VQPGAGPG-PLSNGGSAPSGSMGGRSYNRTGHGADFSD----SPPAFSRRSGSDAASRPP 272
Query: 312 P------SPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA-VSGTEDRLI 364
P E+ T + + VG +IG+GG I +++ + I + +A T +R+
Sbjct: 273 PPTHTEDGEEMQTQNISIPSDMVGCIIGRGGTKISEIRKTSNARISIAKAPHDDTGERMF 332
Query: 365 VISGPAHPDDR 375
I+G A +++
Sbjct: 333 TITGSASANEK 343
>gi|169844143|ref|XP_001828793.1| cytoplasmic protein [Coprinopsis cinerea okayama7#130]
gi|116510164|gb|EAU93059.1| cytoplasmic protein [Coprinopsis cinerea okayama7#130]
Length = 343
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 86/174 (49%), Gaps = 10/174 (5%)
Query: 310 PKPSP-EILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
P P+P E LT R L + G +IGK G + L+++TG V + ++G +R++ ++G
Sbjct: 20 PTPAPNETLTLRALVSTKDAGVIIGKAGKNVADLREQTGVKAGVSKVIAGVHERVLTVTG 79
Query: 369 PAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMT--RLLVASNQIGCLLGKGGSIIAE 426
+ ++ + ++ A P V T RLL++ N +G ++G+ G I
Sbjct: 80 SV---EAVAKAYNLIISQLVSSNPAAPPASSSNVHTSIRLLISHNLMGTIIGRNGLKIKA 136
Query: 427 MRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFR 480
++ SGA + + K+ +P+ E VV + G EA+ A+ +I L + R
Sbjct: 137 IQDNSGARM-VASKEMLPQS---TERVVEVQGSPEAIGRAVEEIGKCLLEDWER 186
>gi|4191610|gb|AAD09827.1| IGF-II mRNA-binding protein 2 [Homo sapiens]
gi|18204201|gb|AAH21290.1| Insulin-like growth factor 2 mRNA binding protein 2 [Homo sapiens]
gi|123982692|gb|ABM83087.1| insulin-like growth factor 2 mRNA binding protein 2 [synthetic
construct]
gi|157928388|gb|ABW03490.1| insulin-like growth factor 2 mRNA binding protein 2 [synthetic
construct]
Length = 598
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 111/501 (22%), Positives = 198/501 (39%), Gaps = 126/501 (25%)
Query: 14 DDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIM--------FRVLCPVSKIDGVIGKDG 65
D+ + P+ +++Q+ GD+S + + PGG R+L P + +IGK+G
Sbjct: 156 DEEVSSPSPPQRAQR--GDHSSREQGHA-PGGTSQARQIDFPLRILVPTQFVGAIIGKEG 212
Query: 66 EMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASV 125
+ I++ T + I R EN+G E V
Sbjct: 213 LTIKNITKQTQSRV-------------------------------DIHRKENSGAAEKPV 241
Query: 126 ADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSS 185
+ EG+ +A ++ E M + ET++A++
Sbjct: 242 TIHA-------TPEGT---------------SEACRMILEIMQKEADETKLAEE------ 273
Query: 186 KFVLRLLVLSTQVGCLLGKGGCVIKQID-----KLPTCALAS------DEVVQITGEVDT 234
L++L + VG L+GK G +K+I+ K+ +L + + + G V+
Sbjct: 274 -IPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEA 332
Query: 235 VRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVA------ 288
A I +L + D ++ ++ +P ++S+ G ++TG ++
Sbjct: 333 CASAEIEIMKKLREAFENDMLAV----NQQANLIPGLNLSALGI-FSTGLSVLSPPAGPR 387
Query: 289 -----------DIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGA 337
H S+ H+ G PE L + VG +IGK GA
Sbjct: 388 GAPPAAPYHPFTTHSGYFSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGA 447
Query: 338 IIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPD 396
I+ L + G IK+ A +R+++I+GP +A + Q RI + +
Sbjct: 448 HIKQLARFAGASIKIAPAEGPDVSERMVIITGPP----------EAQFKAQGRIFGKLKE 497
Query: 397 ------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASEN 450
E + + V S+ G ++GKGG + E++ L+ A + I+ +DQ P EN
Sbjct: 498 ENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP---DEN 553
Query: 451 EEVVL-INGEFEAVQEALFQI 470
EEV++ I G F A Q A +I
Sbjct: 554 EEVIVRIIGHFFASQTAQRKI 574
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 143/344 (41%), Gaps = 57/344 (16%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV-MEAVSGTEDRLIVISGPAHPDDRIS 377
R+L + VG +IGK G I+++ ++T + + + SG ++ + I A P+
Sbjct: 195 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIH--ATPEGTSE 252
Query: 378 APQDAVLRV------QTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLS 431
A + +L + +T++A IP ++L + +G L+GK G + ++ +
Sbjct: 253 ACR-MILEIMQKEADETKLAEEIP--------LKILAHNGLVGRLIGKEGRNLKKIEHET 303
Query: 432 GAYIRILGKDQIPKCASEN-EEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPL 490
G I I + + N E + + G EA A +I +LR F D ++N+
Sbjct: 304 GTKITI---SSLQDLSIYNPERTITVKGTVEACASAEIEIMKKLREAFENDML-AVNQQA 359
Query: 491 NPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHH 550
N I LS G++S G PP +HP HS +
Sbjct: 360 N------------LIPGLNLSALGIFSTGLSVLSPPAGPRGAPPAAPYHPFTTHSGYFSS 407
Query: 551 IHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRR-VPVVVPRSLVPIIQGEDGA 609
++ PH +GP FP P + V + +P V I G+ GA
Sbjct: 408 LY-----PH----HQFGP-----------FPHHHSYPEQEIVNLFIPTQAVGAIIGKKGA 447
Query: 610 CLKQIRQISDAKITITDPK-PGATETVIIISGTPEQTHAAQSLI 652
+KQ+ + + A I I + P +E ++II+G PE AQ I
Sbjct: 448 HIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI 491
>gi|402906002|ref|XP_003915796.1| PREDICTED: RNA-binding protein Nova-2 [Papio anubis]
Length = 618
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 90/177 (50%), Gaps = 28/177 (15%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA---VSGTEDRLIVISGPAHPDDR 375
++L G +IGKGG I L++ETG IK+ ++ GT +R+ ++ G A +
Sbjct: 161 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 220
Query: 376 ISA---------PQDA-------VLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGK 419
+ + PQ +L+ QT + PD +Q +L+V ++ G ++GK
Sbjct: 221 VHSFIAEKVREIPQAMTKPEVVNILQPQTTMN---PDRAKQA---KLIVPNSTAGLIIGK 274
Query: 420 GGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRH 476
GG+ + + + SGA++++ Q P+ + E VV ++GE E V +A+ I +++
Sbjct: 275 GGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQE 328
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 591 VPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPK---PGATETVIIISGTPEQTHA 647
V + VP +LV I G+ G L + ++++ A+I I+ PG + I+G+P T A
Sbjct: 535 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQA 594
Query: 648 AQSLIQAFVMSE 659
AQ LI V E
Sbjct: 595 AQYLISQRVTYE 606
Score = 39.3 bits (90), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 403 MTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQ-IPKCASENEEVVLINGEFE 461
+ + V N +G +LGKGG + E ++L+GA I+I K + +P + N V I G
Sbjct: 534 LVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLP--GTRNRRVT-ITGSPA 590
Query: 462 AVQEALFQITTRLRHH 477
A Q A + I+ R+ +
Sbjct: 591 ATQAAQYLISQRVTYE 606
Score = 38.9 bits (89), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 589 RRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGAT--ETVIIISGTPEQTH 646
++ ++VP S +I G+ GA +K + + S A + ++ G E V+ +SG PEQ H
Sbjct: 257 KQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVH 316
Query: 647 AAQSLI 652
A S I
Sbjct: 317 KAVSAI 322
>gi|109042328|ref|XP_001095336.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 5 [Macaca mulatta]
gi|402860699|ref|XP_003894760.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 1 [Papio anubis]
Length = 599
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 111/501 (22%), Positives = 198/501 (39%), Gaps = 126/501 (25%)
Query: 14 DDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIM--------FRVLCPVSKIDGVIGKDG 65
D+ + P+ +++Q+ GD+S + + PGG R+L P + +IGK+G
Sbjct: 157 DEEVSSPSPPQRAQR--GDHSSREQGHA-PGGTSQARQIDFPLRILVPTQFVGAIIGKEG 213
Query: 66 EMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASV 125
+ I++ T + I R EN+G E V
Sbjct: 214 LTIKNITKQTQSRV-------------------------------DIHRKENSGAAEKPV 242
Query: 126 ADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSS 185
+ EG+ +A ++ E M + ET++A++
Sbjct: 243 TIHA-------TPEGT---------------SEACRMILEIMQKEADETKLAEE------ 274
Query: 186 KFVLRLLVLSTQVGCLLGKGGCVIKQID-----KLPTCALAS------DEVVQITGEVDT 234
L++L + VG L+GK G +K+I+ K+ +L + + + G V+
Sbjct: 275 -IPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEA 333
Query: 235 VRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVAD----- 289
A I +L + D ++ ++ +P ++S+ G ++TG ++
Sbjct: 334 CASAEIEIMKKLREAFENDMLAV----NQQANLIPGLNLSALGI-FSTGLSVLSPPAGPR 388
Query: 290 ------------IHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGA 337
H S+ H+ G PE L + VG +IGK GA
Sbjct: 389 GAPPAAPYHPFATHSGYFSSLYPHHQFGPFPHHHSYPEQEVVNLFIPTQAVGAIIGKKGA 448
Query: 338 IIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPD 396
I+ L + G IK+ A +R+++I+GP +A + Q RI + +
Sbjct: 449 HIKQLARFAGASIKIAPAEGPDVSERMVIITGPP----------EAQFKAQGRIFGKLKE 498
Query: 397 ------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASEN 450
E + + V S+ G ++GKGG + E++ L+ A + I+ +DQ P EN
Sbjct: 499 ENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP---DEN 554
Query: 451 EEVVL-INGEFEAVQEALFQI 470
EEV++ I G F A Q A +I
Sbjct: 555 EEVIVRIIGHFFASQTAQRKI 575
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 143/344 (41%), Gaps = 57/344 (16%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV-MEAVSGTEDRLIVISGPAHPDDRIS 377
R+L + VG +IGK G I+++ ++T + + + SG ++ + I A P+
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIH--ATPEGTSE 253
Query: 378 APQDAVLRV------QTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLS 431
A + +L + +T++A IP ++L + +G L+GK G + ++ +
Sbjct: 254 ACR-MILEIMQKEADETKLAEEIP--------LKILAHNGLVGRLIGKEGRNLKKIEHET 304
Query: 432 GAYIRILGKDQIPKCASEN-EEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPL 490
G I I + + N E + + G EA A +I +LR F D ++N+
Sbjct: 305 GTKITI---SSLQDLSIYNPERTITVKGTVEACASAEIEIMKKLREAFENDML-AVNQQA 360
Query: 491 NPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHH 550
N I LS G++S G PP +HP HS +
Sbjct: 361 N------------LIPGLNLSALGIFSTGLSVLSPPAGPRGAPPAAPYHPFATHSGYFSS 408
Query: 551 IHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRR-VPVVVPRSLVPIIQGEDGA 609
++ PH +GP FP P + V + +P V I G+ GA
Sbjct: 409 LY-----PH----HQFGP-----------FPHHHSYPEQEVVNLFIPTQAVGAIIGKKGA 448
Query: 610 CLKQIRQISDAKITITDPK-PGATETVIIISGTPEQTHAAQSLI 652
+KQ+ + + A I I + P +E ++II+G PE AQ I
Sbjct: 449 HIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI 492
>gi|64085377|ref|NP_006539.3| insulin-like growth factor 2 mRNA-binding protein 2 isoform a [Homo
sapiens]
gi|224471831|sp|Q9Y6M1.2|IF2B2_HUMAN RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 2;
Short=IGF2 mRNA-binding protein 2; Short=IMP-2; AltName:
Full=Hepatocellular carcinoma autoantigen p62; AltName:
Full=IGF-II mRNA-binding protein 2; AltName: Full=VICKZ
family member 2
gi|119598617|gb|EAW78211.1| insulin-like growth factor 2 mRNA binding protein 2, isoform CRA_c
[Homo sapiens]
gi|158254760|dbj|BAF83353.1| unnamed protein product [Homo sapiens]
gi|410223074|gb|JAA08756.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
gi|410251296|gb|JAA13615.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
gi|410302886|gb|JAA30043.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
gi|410342487|gb|JAA40190.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
Length = 599
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 111/501 (22%), Positives = 198/501 (39%), Gaps = 126/501 (25%)
Query: 14 DDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIM--------FRVLCPVSKIDGVIGKDG 65
D+ + P+ +++Q+ GD+S + + PGG R+L P + +IGK+G
Sbjct: 157 DEEVSSPSPPQRAQR--GDHSSREQGHA-PGGTSQARQIDFPLRILVPTQFVGAIIGKEG 213
Query: 66 EMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASV 125
+ I++ T + I R EN+G E V
Sbjct: 214 LTIKNITKQTQSRV-------------------------------DIHRKENSGAAEKPV 242
Query: 126 ADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSS 185
+ EG+ +A ++ E M + ET++A++
Sbjct: 243 TIHA-------TPEGT---------------SEACRMILEIMQKEADETKLAEE------ 274
Query: 186 KFVLRLLVLSTQVGCLLGKGGCVIKQID-----KLPTCALAS------DEVVQITGEVDT 234
L++L + VG L+GK G +K+I+ K+ +L + + + G V+
Sbjct: 275 -IPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEA 333
Query: 235 VRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVA------ 288
A I +L + D ++ ++ +P ++S+ G ++TG ++
Sbjct: 334 CASAEIEIMKKLREAFENDMLAV----NQQANLIPGLNLSALGI-FSTGLSVLSPPAGPR 388
Query: 289 -----------DIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGA 337
H S+ H+ G PE L + VG +IGK GA
Sbjct: 389 GAPPAAPYHPFTTHSGYFSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGA 448
Query: 338 IIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPD 396
I+ L + G IK+ A +R+++I+GP +A + Q RI + +
Sbjct: 449 HIKQLARFAGASIKIAPAEGPDVSERMVIITGPP----------EAQFKAQGRIFGKLKE 498
Query: 397 ------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASEN 450
E + + V S+ G ++GKGG + E++ L+ A + I+ +DQ P EN
Sbjct: 499 ENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP---DEN 554
Query: 451 EEVVL-INGEFEAVQEALFQI 470
EEV++ I G F A Q A +I
Sbjct: 555 EEVIVRIIGHFFASQTAQRKI 575
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 143/344 (41%), Gaps = 57/344 (16%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV-MEAVSGTEDRLIVISGPAHPDDRIS 377
R+L + VG +IGK G I+++ ++T + + + SG ++ + I A P+
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIH--ATPEGTSE 253
Query: 378 APQDAVLRV------QTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLS 431
A + +L + +T++A IP ++L + +G L+GK G + ++ +
Sbjct: 254 ACR-MILEIMQKEADETKLAEEIP--------LKILAHNGLVGRLIGKEGRNLKKIEHET 304
Query: 432 GAYIRILGKDQIPKCASEN-EEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPL 490
G I I + + N E + + G EA A +I +LR F D ++N+
Sbjct: 305 GTKITI---SSLQDLSIYNPERTITVKGTVEACASAEIEIMKKLREAFENDML-AVNQQA 360
Query: 491 NPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHH 550
N I LS G++S G PP +HP HS +
Sbjct: 361 N------------LIPGLNLSALGIFSTGLSVLSPPAGPRGAPPAAPYHPFTTHSGYFSS 408
Query: 551 IHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRR-VPVVVPRSLVPIIQGEDGA 609
++ PH +GP FP P + V + +P V I G+ GA
Sbjct: 409 LY-----PH----HQFGP-----------FPHHHSYPEQEIVNLFIPTQAVGAIIGKKGA 448
Query: 610 CLKQIRQISDAKITITDPK-PGATETVIIISGTPEQTHAAQSLI 652
+KQ+ + + A I I + P +E ++II+G PE AQ I
Sbjct: 449 HIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI 492
>gi|61369343|gb|AAX43320.1| heterogeneous nuclear ribonucleoprotein K [synthetic construct]
Length = 465
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 97/443 (21%), Positives = 156/443 (35%), Gaps = 101/443 (22%)
Query: 301 FHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTE 360
E R + + E++ R+L + G VIGKGG I++L+ + + V ++ SG E
Sbjct: 27 MEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDS-SGPE 85
Query: 361 DRLIVISGPAH-----------------------PDDRISAPQDAVLRVQTRIARAIPDN 397
R++ IS ++ DAV + + + +
Sbjct: 86 -RILSISADIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFD 144
Query: 398 REQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLIN 457
E RLL+ + G ++G G+ I E+R+ + I++ + C + VVLI
Sbjct: 145 CE----LRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQE----CCPHSTDRVVLIG 196
Query: 458 GEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSPFPSF---IGRRELSPPG 514
G+ + V E + I + + +P +P F D+ + F R P G
Sbjct: 197 GKPDRVVECIKIILDLISESPIKGR----AQPYDPNFYDETYDYGGFTMMFDDRRGRPVG 252
Query: 515 MYSNFGPSFHKF-DAVGGPPPPGSFHPHDDHSAF-------------------------- 547
F + GG P P S +DD S
Sbjct: 253 FPMRGRGGFDRMPPGRGGRPMPPSRRDYDDMSPRRGPPPPPPGRGGRGGSRARNLPLPPP 312
Query: 548 -------MHHIHRPGMPPHMPD--------------MKPWGPQGLMEVGGPMGFPDF--- 583
+ R G P D + W P P G +
Sbjct: 313 PPPRGGDLMAYDRRGRPGDRYDGMVGFSADETWDSAIDTWSPSEWQMAYEPQGGSGYDYS 372
Query: 584 ----------VGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATE 633
+G P V +P+ L I G+ G +KQIR S A I I +P G+ +
Sbjct: 373 YAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSED 432
Query: 634 TVIIISGTPEQTHAAQSLIQAFV 656
+I I+GT +Q AQ L+Q V
Sbjct: 433 RIITITGTQDQIQNAQYLLQNSV 455
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 38/63 (60%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
I +V P +IGK G+ + QI ++G +I+++E + GS++R++ I + ++ + +
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNA 447
Query: 106 ENL 108
+ L
Sbjct: 448 QYL 450
>gi|17530887|ref|NP_511111.1| IGF-II mRNA-binding protein, isoform A [Drosophila melanogaster]
gi|24641108|ref|NP_727456.1| IGF-II mRNA-binding protein, isoform B [Drosophila melanogaster]
gi|24641110|ref|NP_727457.1| IGF-II mRNA-binding protein, isoform C [Drosophila melanogaster]
gi|7533029|gb|AAF63331.1|AF241237_1 IGF-II mRNA-binding protein [Drosophila melanogaster]
gi|17862978|gb|AAL39966.1| SD07045p [Drosophila melanogaster]
gi|22832057|gb|AAF47958.2| IGF-II mRNA-binding protein, isoform A [Drosophila melanogaster]
gi|22832058|gb|AAN09274.1| IGF-II mRNA-binding protein, isoform B [Drosophila melanogaster]
gi|22832059|gb|AAN09275.1| IGF-II mRNA-binding protein, isoform C [Drosophila melanogaster]
gi|220947510|gb|ACL86298.1| Imp-PA [synthetic construct]
gi|220956906|gb|ACL90996.1| Imp-PA [synthetic construct]
Length = 566
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 143/321 (44%), Gaps = 39/321 (12%)
Query: 175 EVADQE--NTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI----DKLPTCALASD----- 223
EV QE +T + L++L + +G ++GK G IK+I D T + +D
Sbjct: 144 EVMQQEAISTNKGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDINSFN 203
Query: 224 --EVVQITGEVDTVRKALKLISHQLLDNSPRDHESI-PGNPTGPS-HPLPDHSVSSQGAP 279
++ + G ++ + +A IS +L + D +++ P + P HP+ S G
Sbjct: 204 LERIITVKGLIENMSRAENQISTKLRQSYENDLQAMAPQSLMFPGLHPMAMMSTPGNGMV 263
Query: 280 YATGHRDVADIHLPMP-PSIPKFHES----GVLDRPKPSPEILTFRLLCHDERVGGVIGK 334
+ T MP PS F S V+ P+ T L + VG +IG
Sbjct: 264 FNTS----------MPFPSCQSFAMSKTPASVVPPVFPNDLQETTYLYIPNNAVGAIIGT 313
Query: 335 GGAIIRSLKQETGCDIKVM-----EAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTR 389
G+ IRS+ + + +K+ + + +R + I G P+ + A +++
Sbjct: 314 RGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGT--PEGQWKAQYMIFEKMREE 371
Query: 390 IARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASE 449
D+ TV LLVAS+Q+G ++GKGG + E+++++G+ I++ P +
Sbjct: 372 GFMCGTDDVRLTV--ELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLPEHALAPPSGGD 429
Query: 450 NEEVVLINGEFEAVQEALFQI 470
E V I G F +VQ A +I
Sbjct: 430 EETPVHIIGLFYSVQSAQRRI 450
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 136/342 (39%), Gaps = 65/342 (19%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRIS 377
R+L E VG +IG+ G+ IR++ Q++ + V + G+ ++ I I G +P++ +
Sbjct: 80 LRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENVGSLEKSITIYG--NPENCTN 137
Query: 378 APQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRI 437
A + + +Q AI N+ + + ++L +N IG ++GK G+ I + + + I +
Sbjct: 138 ACKRILEVMQ---QEAISTNKGEICL-KILAHNNLIGRIIGKSGNTIKRIMQDTDTKITV 193
Query: 438 LGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQ 497
+ I + E ++ + G E + A QI+T+LR + D + + P L
Sbjct: 194 SSINDI--NSFNLERIITVKGLIENMSRAENQISTKLRQSYENDL-----QAMAPQSLM- 245
Query: 498 VSPFPSFIGRRELSPP--GMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPG 555
FP +S P GM N F + P S P
Sbjct: 246 ---FPGLHPMAMMSTPGNGMVFNTSMPFPSCQSFAMSKTPASVVP--------------- 287
Query: 556 MPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIR 615
P P L E + +P + V I G G+ ++ I
Sbjct: 288 ---------PVFPNDLQET----------------TYLYIPNNAVGAIIGTRGSHIRSIM 322
Query: 616 QISDAKITIT-----DPKPGATETVIIISGTPEQTHAAQSLI 652
+ S+A + I P TE + I GTPE AQ +I
Sbjct: 323 RFSNASLKIAPLDADKPLDQQTERKVTIVGTPEGQWKAQYMI 364
>gi|195445981|ref|XP_002070572.1| GK10958 [Drosophila willistoni]
gi|194166657|gb|EDW81558.1| GK10958 [Drosophila willistoni]
Length = 578
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 90/187 (48%), Gaps = 23/187 (12%)
Query: 329 GGVIGKGGAIIRSLKQETGCDIKVMEA---VSGTEDRLIVISGPAHPD--------DRIS 377
G +IGKGG I SL+++TG +K+ ++ GT +R+ +I+G D+I
Sbjct: 78 GAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEGIMTVLDFIMDKIR 137
Query: 378 APQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRI 437
D ++ I +E+ ++LV ++ G ++GKGG+ I ++++ SG+Y++I
Sbjct: 138 EKPDLTTKI---IDAESKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQI 194
Query: 438 LGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQ 497
Q PK S E + I G+ E + A I +++ P LN ++ D
Sbjct: 195 ---SQKPKDVSLQERCITIIGDKENNKNACKMILSKIVED------PQSGTCLNVSYADV 245
Query: 498 VSPFPSF 504
P +F
Sbjct: 246 SGPVANF 252
>gi|194762728|ref|XP_001963486.1| GF20264 [Drosophila ananassae]
gi|190629145|gb|EDV44562.1| GF20264 [Drosophila ananassae]
Length = 590
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 143/321 (44%), Gaps = 39/321 (12%)
Query: 175 EVADQE--NTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI----DKLPTCALASD----- 223
EV QE +T + L++L + +G ++GK G IK+I D T + +D
Sbjct: 151 EVMQQEALSTNKGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDINSFN 210
Query: 224 --EVVQITGEVDTVRKALKLISHQLLDNSPRDHESI-PGNPTGPS-HPLPDHSVSSQGAP 279
++ + G ++ + +A IS +L + D +++ P + P HP+ S G
Sbjct: 211 LERIITVKGLIENMSRAENQISTKLRQSYENDLQAMAPQSLMFPGLHPMAMMSTPGNGMV 270
Query: 280 YATGHRDVADIHLPMP-PSIPKFHES----GVLDRPKPSPEILTFRLLCHDERVGGVIGK 334
+ T MP PS F S V+ P+ T L + VG +IG
Sbjct: 271 FNTS----------MPFPSCQSFAMSKTPASVVPPVFPNDLQETTFLYIPNNAVGAIIGT 320
Query: 335 GGAIIRSLKQETGCDIKVM-----EAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTR 389
G+ IRS+ + + +K+ + + +R + I G P+ + A +++
Sbjct: 321 KGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGT--PEGQWKAQYMIFEKMREE 378
Query: 390 IARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASE 449
D+ TV LLVAS+Q+G ++GKGG + E+++++G+ I++ P +
Sbjct: 379 GFMCGTDDVRLTV--ELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLPEHALAPPSGGD 436
Query: 450 NEEVVLINGEFEAVQEALFQI 470
E V I G F +VQ A +I
Sbjct: 437 EETPVHIIGPFYSVQSAQRRI 457
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 137/342 (40%), Gaps = 65/342 (19%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRIS 377
R+L E VG +IG+ G+ IR++ Q++ + V + G+ ++ I I G +P++ +
Sbjct: 87 LRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENVGSVEKSITIYG--NPENCTN 144
Query: 378 APQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRI 437
A + +L V + A+ N+ + + ++L +N IG ++GK G+ I + + + I +
Sbjct: 145 ACKR-ILEVMQQ--EALSTNKGEICL-KILAHNNLIGRIIGKSGNTIKRIMQDTDTKITV 200
Query: 438 LGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQ 497
+ I + E ++ + G E + A QI+T+LR + D + + P L
Sbjct: 201 SSINDI--NSFNLERIITVKGLIENMSRAENQISTKLRQSYENDL-----QAMAPQSL-- 251
Query: 498 VSPFPSFIGRRELSPP--GMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPG 555
FP +S P GM N F + P S P
Sbjct: 252 --MFPGLHPMAMMSTPGNGMVFNTSMPFPSCQSFAMSKTPASVVP--------------- 294
Query: 556 MPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIR 615
P P L E + +P + V I G G+ ++ I
Sbjct: 295 ---------PVFPNDLQET----------------TFLYIPNNAVGAIIGTKGSHIRSIM 329
Query: 616 QISDAKITIT-----DPKPGATETVIIISGTPEQTHAAQSLI 652
+ S+A + I P TE + I GTPE AQ +I
Sbjct: 330 RFSNASLKIAPLDADKPLDQQTERKVTIVGTPEGQWKAQYMI 371
>gi|345329393|ref|XP_001506808.2| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 2
[Ornithorhynchus anatinus]
Length = 464
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 97/443 (21%), Positives = 156/443 (35%), Gaps = 101/443 (22%)
Query: 301 FHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTE 360
E R + + E++ R+L + G VIGKGG I++L+ + + V ++ SG E
Sbjct: 27 MEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDS-SGPE 85
Query: 361 DRLIVISGPAH-----------------------PDDRISAPQDAVLRVQTRIARAIPDN 397
R++ IS ++ DAV + + + +
Sbjct: 86 -RILSISADIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFD 144
Query: 398 REQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLIN 457
E RLL+ + G ++G G+ I E+R+ + I++ + C + VVLI
Sbjct: 145 CE----LRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQE----CCPHSTDRVVLIG 196
Query: 458 GEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSPFPSF---IGRRELSPPG 514
G+ + V E + I + + +P +P F D+ + F R P G
Sbjct: 197 GKPDRVVECIKIILDLISESPIKGR----AQPYDPNFYDETYDYGGFTVMFDDRRGRPVG 252
Query: 515 MYSNFGPSFHKF-DAVGGPPPPGSFHPHDDHSAF-------------------------- 547
F + GG P P S +DD S
Sbjct: 253 FPMRGRGGFDRMPPGRGGRPMPPSRRDYDDMSPRRGPPPPPPGRGGRGGSRARNLPLPPP 312
Query: 548 -------MHHIHRPGMPPHMPD--------------MKPWGPQGLMEVGGPMGFPDF--- 583
+ R G P D + W P P G +
Sbjct: 313 PPPRGGDLMGYDRRGRPGDRYDGMVGFSADETWDSAIDTWSPSEWQMAYEPQGGSGYDYS 372
Query: 584 ----------VGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATE 633
+G P V +P+ L I G+ G +KQIR S A I I +P G+ +
Sbjct: 373 YAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSED 432
Query: 634 TVIIISGTPEQTHAAQSLIQAFV 656
+I I+GT +Q AQ L+Q V
Sbjct: 433 RIITITGTQDQIQNAQYLLQNSV 455
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 38/63 (60%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
I +V P +IGK G+ + QI ++G +I+++E + GS++R++ I + ++ + +
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNA 447
Query: 106 ENL 108
+ L
Sbjct: 448 QYL 450
>gi|402225510|gb|EJU05571.1| hypothetical protein DACRYDRAFT_20011 [Dacryopinax sp. DJM-731 SS1]
Length = 413
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 85/172 (49%), Gaps = 22/172 (12%)
Query: 311 KPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPA 370
+P P+ + R L + +IGKGG+ + +++++G I V E++ G +R++ ++GP
Sbjct: 116 EPPPQNIHMRALIVTQDASIIIGKGGSHVNEIREKSGARITVSESIPGNPERILNVTGPL 175
Query: 371 HPDDRISAPQDAVLRVQTRIARAIPDN--------REQTVMTRLLVASNQIGCLLGKGGS 422
DAV + I R I D + V + ++ ++++G L+GK GS
Sbjct: 176 ----------DAVAKAFGLIVRQINDEPFEQPSVPGSRAVTIKFIIPNSRMGTLIGKAGS 225
Query: 423 IIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRL 474
I E+++ SGA + + +P E V+ ++G +A+ A + + L
Sbjct: 226 KIKEIQEASGAKLH-ASEGLLPGS---TERVLNVSGVADAIHIATYYVGNSL 273
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 139/367 (37%), Gaps = 61/367 (16%)
Query: 2 SLPLTPSKRPH-DDDNHTEPNGKEKSQKLA-GDYSENQPSKSFPGGIMFRVLCPVSKIDG 59
SL P+ +P D D +G LA D QPS S PG + + P +
Sbjct: 43 SLAQIPADQPMLDADTPAAADGSLTPTSLAPADSVSVQPSNSSPGAVQATITAPPTDATP 102
Query: 60 VIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNG 119
KD E + I + + D +++ + + E E A I SE+
Sbjct: 103 TADKDEENEDGTREPPPQNIHMRALIVTQDASIIIGKGGSHVNEIREKSGARITVSESIP 162
Query: 120 REEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQ 179
+ LN V KA L+ R + EP +Q
Sbjct: 163 GNPERI---------------------LNVTGPLDAVAKAFGLIV-RQINDEP----FEQ 196
Query: 180 ENTKSSKFV-LRLLVLSTQVGCLLGKGGCVIKQIDKLPTCALASDE---------VVQIT 229
+ S+ V ++ ++ ++++G L+GK G IK+I + L + E V+ ++
Sbjct: 197 PSVPGSRAVTIKFIIPNSRMGTLIGKAGSKIKEIQEASGAKLHASEGLLPGSTERVLNVS 256
Query: 230 GEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVAD 289
G D + A + + LL+ SHP S SS A Y R +A
Sbjct: 257 GVADAIHIATYYVGNSLLN----------------SHP----SYSSTHASYKQQRRPMAS 296
Query: 290 IHLPMPPSIPKFHESGVLDRPKPSPEIL--TFRLLCHDERVGGVIGKGGAIIRSLKQETG 347
PP+ P + P+P L T ++ VG +IGKGGA I ++ +G
Sbjct: 297 TTY-YPPNTPVSNYGYPGPAAAPAPVSLQQTQNFYIPNDLVGSIIGKGGAKINEIRHVSG 355
Query: 348 CDIKVME 354
C IK++E
Sbjct: 356 CQIKILE 362
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 87/215 (40%), Gaps = 46/215 (21%)
Query: 312 PSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAV-SGTEDRLIVISGPA 370
P +T + + + R+G +IGK G+ I+ +++ +G + E + G+ +R++ +SG A
Sbjct: 200 PGSRAVTIKFIIPNSRMGTLIGKAGSKIKEIQEASGAKLHASEGLLPGSTERVLNVSGVA 259
Query: 371 -----------------HPDDRISAPQDAVLRVQTRIARAIPDNR--------------- 398
HP + R P N
Sbjct: 260 DAIHIATYYVGNSLLNSHPSYSSTHASYKQQRRPMASTTYYPPNTPVSNYGYPGPAAAPA 319
Query: 399 ----EQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIP-------KCA 447
+QT + ++ +G ++GKGG+ I E+R +SG I+IL Q P +
Sbjct: 320 PVSLQQT--QNFYIPNDLVGSIIGKGGAKINEIRHVSGCQIKILEPGQGPAPGSGAVQPM 377
Query: 448 SENEEVVLINGEFEAVQEALFQITTRLRHHFFRDA 482
SE E +V I G +Q A+ + +R+ R A
Sbjct: 378 SETERMVTITGGIANIQMAVQLLASRIEQEKQRLA 412
>gi|332818640|ref|XP_001151234.2| PREDICTED: LOW QUALITY PROTEIN: insulin-like growth factor 2 mRNA
binding protein 2 isoform 7 [Pan troglodytes]
Length = 599
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 111/501 (22%), Positives = 198/501 (39%), Gaps = 126/501 (25%)
Query: 14 DDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIM--------FRVLCPVSKIDGVIGKDG 65
D+ + P+ +++Q+ GD+S + + PGG R+L P + +IGK+G
Sbjct: 157 DEEVSSPSPPQRAQR--GDHSSREQGHA-PGGTSQARQIDFPLRILVPTQFVGAIIGKEG 213
Query: 66 EMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASV 125
+ I++ T + I R EN+G E V
Sbjct: 214 LTIKNITKQTQSRV-------------------------------DIHRKENSGAAEKPV 242
Query: 126 ADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSS 185
+ EG+ +A ++ E M + ET++A++
Sbjct: 243 TIHA-------TPEGT---------------SEACRMILEIMQKEADETKLAEE------ 274
Query: 186 KFVLRLLVLSTQVGCLLGKGGCVIKQID-----KLPTCALAS------DEVVQITGEVDT 234
L++L + VG L+GK G +K+I+ K+ +L + + + G V+
Sbjct: 275 -IPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEA 333
Query: 235 VRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVA------ 288
A I +L + D ++ ++ +P ++S+ G ++TG ++
Sbjct: 334 CASAEIEIMKKLREAFENDMLAV----NQQANLIPGLNLSALGI-FSTGLSVLSPPAGPR 388
Query: 289 -----------DIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGA 337
H S+ H+ G PE L + VG +IGK GA
Sbjct: 389 GAPPAAPYHPFTTHSGYFSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGA 448
Query: 338 IIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPD 396
I+ L + G IK+ A +R+++I+GP +A + Q RI + +
Sbjct: 449 HIKQLARFAGASIKIAPAEGPDVSERMVIITGPP----------EAQFKAQGRIFGKLKE 498
Query: 397 ------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASEN 450
E + + V S+ G ++GKGG + E++ L+ A + I+ +DQ P EN
Sbjct: 499 ENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP---DEN 554
Query: 451 EEVVL-INGEFEAVQEALFQI 470
EEV++ I G F A Q A +I
Sbjct: 555 EEVIVRIIGHFFASQTAQRKI 575
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 143/344 (41%), Gaps = 57/344 (16%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV-MEAVSGTEDRLIVISGPAHPDDRIS 377
R+L + VG +IGK G I+++ ++T + + + SG ++ + I A P+
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIH--ATPEGTSE 253
Query: 378 APQDAVLRV------QTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLS 431
A + +L + +T++A IP ++L + +G L+GK G + ++ +
Sbjct: 254 ACR-MILEIMQKEADETKLAEEIP--------LKILAHNGLVGRLIGKEGRNLKKIEHET 304
Query: 432 GAYIRILGKDQIPKCASEN-EEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPL 490
G I I + + N E + + G EA A +I +LR F D ++N+
Sbjct: 305 GTKITI---SSLQDLSIYNPERTITVKGTVEACASAEIEIMKKLREAFENDML-AVNQQA 360
Query: 491 NPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHH 550
N I LS G++S G PP +HP HS +
Sbjct: 361 N------------LIPGLNLSALGIFSTGLSVLSPPAGPRGAPPAAPYHPFTTHSGYFSS 408
Query: 551 IHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRR-VPVVVPRSLVPIIQGEDGA 609
++ PH +GP FP P + V + +P V I G+ GA
Sbjct: 409 LY-----PH----HQFGP-----------FPHHHSYPEQEIVNLFIPTQAVGAIIGKKGA 448
Query: 610 CLKQIRQISDAKITITDPK-PGATETVIIISGTPEQTHAAQSLI 652
+KQ+ + + A I I + P +E ++II+G PE AQ I
Sbjct: 449 HIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI 492
>gi|240281620|gb|EER45123.1| KH domain RNA-binding protein [Ajellomyces capsulatus H143]
Length = 275
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 82/174 (47%), Gaps = 5/174 (2%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT R + + G +IGK G + L+ ETG V + V G DR++ ++GP +
Sbjct: 44 LTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGPLQGTAKA 103
Query: 377 SA-PQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYI 435
A +L ++ + T RLL++ NQ+G ++G+ G I ++ SG +
Sbjct: 104 YAIVAKGLLEGAPQLGMGGVASNNGTHPVRLLISHNQMGTIIGRQGLKIKYIQDASGVRM 163
Query: 436 RILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRP 489
+ K+ +P+ E +V + G E +++A+++I L + R + P
Sbjct: 164 -VAQKEMLPQ---STERIVEVQGTPEGIEKAVWEIGKCLIDDWQRGTGTVLYNP 213
>gi|403417714|emb|CCM04414.1| predicted protein [Fibroporia radiculosa]
Length = 420
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 97/212 (45%), Gaps = 44/212 (20%)
Query: 307 LDRPK-PSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA-VSGTEDRLI 364
D+P P +T + + + R+G VIGKGGA I+ ++ +G + E + G+ +R++
Sbjct: 192 FDKPSVPGSRAVTIKFMIPNSRMGSVIGKGGAKIKEIQDASGARLNASEGMLPGSTERVL 251
Query: 365 VISGPA---------------HPDDRISAPQDAVLRVQTRIARAIPDNR----------- 398
+SG A ++R+ + ++ + +R P N
Sbjct: 252 SVSGVADAIHIATYYIGNILIEANERLPSYNNSSYYRPSSNSRRPPPNGSSYVPGYSNTY 311
Query: 399 --------EQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRIL-------GKDQI 443
+Q ++ + ++ +GC++GKGGS I E+R +S + I+I+ G +
Sbjct: 312 PGSSHGPPQQLQTQQIYIPNDLVGCIIGKGGSKINEIRHMSASNIKIMEPGAVGVGMNGA 371
Query: 444 PKCA-SENEEVVLINGEFEAVQEALFQITTRL 474
P A E E +V+I G+ +Q A+ + RL
Sbjct: 372 PAPAGGEGERLVVITGQPANIQMAVQLLYHRL 403
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 92/416 (22%), Positives = 152/416 (36%), Gaps = 118/416 (28%)
Query: 269 PDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILT---------F 319
P HS S A A D H+ K E PS T
Sbjct: 70 PSHSQPSDKAASADMADQSGDAHV-------KLEEGSATTSAAPSTSSATGAAPAANIHM 122
Query: 320 RLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAP 379
R L + +IGKGG+ + +++++ + V E++ G +R++ +SGP
Sbjct: 123 RCLIVTQDASIIIGKGGSHVNEIREKSSARVMVSESIPGNPERILNVSGPL--------- 173
Query: 380 QDAVLRVQTRIARAIPDN--------REQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLS 431
DAV + I R I D + V + ++ ++++G ++GKGG+ I E++ S
Sbjct: 174 -DAVSKAFGLIVRRINDEPFDKPSVPGSRAVTIKFMIPNSRMGSVIGKGGAKIKEIQDAS 232
Query: 432 GAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLN 491
GA + + +P E V+ ++G +A+ A + I L R PS N N
Sbjct: 233 GARLN-ASEGMLP---GSTERVLSVSGVADAIHIATYYIGNILIEANER--LPSYN---N 283
Query: 492 PTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHI 551
++ PS RR PP S++ P + PGS H
Sbjct: 284 SSYY-----RPSSNSRR---PPPNGSSYVPGYSNTY-------PGSSH------------ 316
Query: 552 HRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPH--RRVPVVVPRSLVPIIQGEDGA 609
GPP + + +P LV I G+ G+
Sbjct: 317 ---------------------------------GPPQQLQTQQIYIPNDLVGCIIGKGGS 343
Query: 610 CLKQIRQISDAKITITDPKP-------------GATETVIIISGTPEQTHAAQSLI 652
+ +IR +S + I I +P G E +++I+G P A L+
Sbjct: 344 KINEIRHMSASNIKIMEPGAVGVGMNGAPAPAGGEGERLVVITGQPANIQMAVQLL 399
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 109/249 (43%), Gaps = 55/249 (22%)
Query: 147 LNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSKFV-LRLLVLSTQVGCLLGKG 205
LN V KA L+ R+ + E D+ + S+ V ++ ++ ++++G ++GKG
Sbjct: 167 LNVSGPLDAVSKAFGLIVRRIND-----EPFDKPSVPGSRAVTIKFMIPNSRMGSVIGKG 221
Query: 206 GCVIKQIDKLPTCALASDE---------VVQITGEVDTVRKALKLISHQLLDNSPRDHES 256
G IK+I L + E V+ ++G D + A I + L++ + R
Sbjct: 222 GAKIKEIQDASGARLNASEGMLPGSTERVLSVSGVADAIHIATYYIGNILIEANER---- 277
Query: 257 IPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPS----IPKFHESGVLDRPKP 312
LP ++ SS P + R PP+ +P + + P
Sbjct: 278 -----------LPSYNNSSYYRPSSNSRRP--------PPNGSSYVPGYSNTYPGSSHGP 318
Query: 313 SPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVME------------AVSGTE 360
++ T ++ ++ VG +IGKGG+ I ++ + +IK+ME A +G E
Sbjct: 319 PQQLQTQQIYIPNDLVGCIIGKGGSKINEIRHMSASNIKIMEPGAVGVGMNGAPAPAGGE 378
Query: 361 -DRLIVISG 368
+RL+VI+G
Sbjct: 379 GERLVVITG 387
>gi|74144445|dbj|BAE36070.1| unnamed protein product [Mus musculus]
Length = 463
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 97/443 (21%), Positives = 156/443 (35%), Gaps = 101/443 (22%)
Query: 301 FHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTE 360
E R + + E++ R+L + G VIGKGG I++L+ + + V ++ SG E
Sbjct: 27 MEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDS-SGPE 85
Query: 361 DRLIVISGPAH-----------------------PDDRISAPQDAVLRVQTRIARAIPDN 397
R++ IS ++ DAV + + + +
Sbjct: 86 -RILSISADIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFD 144
Query: 398 REQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLIN 457
E RLL+ + G ++G G+ I E+R+ + I++ + C + VVLI
Sbjct: 145 CE----LRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQE----CCPHSTDRVVLIG 196
Query: 458 GEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSPFPSF---IGRRELSPPG 514
G+ + V E + I + + +P +P F D+ + F R P G
Sbjct: 197 GKPDRVVECIKIILDLISESPIKGR----AQPYDPNFYDETYDYGGFTMMFDDRRGRPVG 252
Query: 515 MYSNFGPSFHKF-DAVGGPPPPGSFHPHDDHSAF-------------------------- 547
F + GG P P S +DD S
Sbjct: 253 FPMRGRGGFDRMPPGRGGRPMPPSRRDYDDMSPRRGPPPPPPGRGGRGGSRARNLPLPPP 312
Query: 548 -------MHHIHRPGMPPHMPD--------------MKPWGPQGLMEVGGPMGFPDF--- 583
+ R G P D + W P P G +
Sbjct: 313 PPPRGGDLMAYDRRGRPGDRYDGMVGFSADETWDSAIDTWSPSEWQMAYEPQGSSGYDYS 372
Query: 584 ----------VGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATE 633
+G P V +P+ L I G+ G +KQIR S A I I +P G+ +
Sbjct: 373 YAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSED 432
Query: 634 TVIIISGTPEQTHAAQSLIQAFV 656
+I I+GT +Q AQ L+Q V
Sbjct: 433 RIITITGTQDQIQNAQYLLQNSV 455
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 38/63 (60%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
I +V P +IGK G+ + QI ++G +I+++E + GS++R++ I + ++ + +
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNA 447
Query: 106 ENL 108
+ L
Sbjct: 448 QYL 450
>gi|242785360|ref|XP_002480578.1| KH domain RNA-binding protein [Talaromyces stipitatus ATCC 10500]
gi|218720725|gb|EED20144.1| KH domain RNA-binding protein [Talaromyces stipitatus ATCC 10500]
Length = 367
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 30/203 (14%)
Query: 303 ESGVLD-RPKPSPE----ILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS 357
ESG L+ +PK E ILT R + + G +IGK G + L+ ETG V + V
Sbjct: 29 ESGELEEQPKTDEEYAQAILTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQ 88
Query: 358 GTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVM-----------TRL 406
G DR++ ++G R + +A+ + + Q M RL
Sbjct: 89 GVHDRVLTVTGALQ----------GCARAYSIVAKGLLEGAPQVGMGGVVQNNGTHPIRL 138
Query: 407 LVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEA 466
L++ NQ+G ++G+ G I ++ SG + + K+ +P+ E +V + G E +++A
Sbjct: 139 LISHNQMGTIIGRQGLKIKHIQDASGVRM-VAQKEMLPQST---ERIVEVQGTPEGIEKA 194
Query: 467 LFQITTRLRHHFFRDAFPSINRP 489
+++I L + R + P
Sbjct: 195 VWEIGKCLIDDWQRGTGTVLYNP 217
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 394 IPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEV 453
+ D+ E+ + + ++ +GC++G+GGS I+E+R+ SGA I I + P + E +
Sbjct: 278 VTDDGEEVQTQNISIPADMVGCIIGRGGSKISEIRRSSGARISIA---KAPHDET-GERM 333
Query: 454 VLINGEFEAVQEALFQITTRLRHHFFR 480
I G +A ++AL+ + L R
Sbjct: 334 FTIMGSAQANEKALYLLYENLEAEKMR 360
>gi|449509689|ref|XP_002192903.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
[Taeniopygia guttata]
Length = 531
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 94/223 (42%), Gaps = 30/223 (13%)
Query: 256 SIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPE 315
S PG G + P H + Q TG PP+ G P PE
Sbjct: 306 STPG-ARGAAAATPYHPFAQQSGRRRTGSSAYLSSLYGAPPA-------GAFPHQHPLPE 357
Query: 316 ILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDD 374
L + VG +IGK G I+ L + G IK+ A +R+++I+GP
Sbjct: 358 QEVVNLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAEGPDASERMVIITGPP---- 413
Query: 375 RISAPQDAVLRVQTRIARAIPD------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMR 428
+A + Q RI + + E + + V S G ++GKGG + E++
Sbjct: 414 ------EAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIKVPSFAAGRVIGKGGKTVNELQ 467
Query: 429 KLSGAYIRILGKDQIPKCASENEEVVL-INGEFEAVQEALFQI 470
L+ A + I+ +DQ P ENEEVV+ I G F A Q A +I
Sbjct: 468 NLTSAEV-IVPRDQTP---DENEEVVVKIIGHFFASQTAQRKI 506
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 136/346 (39%), Gaps = 41/346 (11%)
Query: 314 PEILTF--RLLCHDERVGGVIGKGGAIIRSLKQET--GCDIKVMEAVSGTEDRLIVISGP 369
P+ L F R+L + VG +IGK G I++L ++T DI E E + + + P
Sbjct: 112 PKQLDFPLRMLVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRKENAGAAEKPITIHATP 171
Query: 370 AHPDDRISAPQDAVLRV--QTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEM 427
+ D + + +T+ A +P ++L ++ +G L+GK G + ++
Sbjct: 172 EGCSEACRMILDIMQKEADETKSAEEVP--------LKILAHNSLVGRLIGKEGRNLKKI 223
Query: 428 RKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSIN 487
+ +G I I + E + + G EA A +I +LR + D ++N
Sbjct: 224 EQDTGTKITISPLQDL--TIYNPERTITVKGSTEACSNAEVEIMKKLREAYENDVV-AVN 280
Query: 488 RPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAF 547
+ N I LS G++S G +HP S
Sbjct: 281 QQAN------------LIPGLNLSALGIFSTGLSMLPSTPGARGAAAATPYHPFAQQSGR 328
Query: 548 MHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGED 607
R G ++ + P G P+ P V + +P V I G+
Sbjct: 329 ----RRTGSSAYLSSLYGAPPAGAFPHQHPL-------PEQEVVNLFIPTQAVGAIIGKK 377
Query: 608 GACLKQIRQISDAKITITDPK-PGATETVIIISGTPEQTHAAQSLI 652
G +KQ+ + + A I I + P A+E ++II+G PE AQ I
Sbjct: 378 GQHIKQLARFAGASIKIAPAEGPDASERMVIITGPPEAQFKAQGRI 423
>gi|2673961|gb|AAB88661.1| astrocytic NOVA-like RNA-binding protein [Homo sapiens]
Length = 498
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 90/177 (50%), Gaps = 28/177 (15%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA---VSGTEDRLIVISGPAHPDDR 375
++L G +IGKGG I L++ETG IK+ ++ GT +R+ ++ G A +
Sbjct: 41 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 100
Query: 376 ISA---------PQDA-------VLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGK 419
+ + PQ +L+ QT + PD +Q +L+V ++ G ++GK
Sbjct: 101 VHSFIAEKVREIPQAMTKPEVVNILQPQTTMN---PDRAKQA---KLIVPNSTAGLIIGK 154
Query: 420 GGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRH 476
GG+ + + + SGA++++ Q P+ + E VV ++GE E V +A+ I +++
Sbjct: 155 GGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQE 208
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 591 VPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPK---PGATETVIIISGTPEQTHA 647
V + VP +LV I G+ G L + ++++ A+I I+ PG + I+G+P T A
Sbjct: 415 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQA 474
Query: 648 AQSLIQAFVMSE 659
AQ LI V E
Sbjct: 475 AQYLISQRVTYE 486
Score = 39.3 bits (90), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 403 MTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQ-IPKCASENEEVVLINGEFE 461
+ + V N +G +LGKGG + E ++L+GA I+I K + +P + N V I G
Sbjct: 414 LVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLP--GTRNRRVT-ITGSPA 470
Query: 462 AVQEALFQITTRLRHH 477
A Q A + I+ R+ +
Sbjct: 471 ATQAAQYLISQRVTYE 486
>gi|322698027|gb|EFY89801.1| hypothetical protein MAC_04233 [Metarhizium acridum CQMa 102]
Length = 456
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 90/376 (23%), Positives = 150/376 (39%), Gaps = 64/376 (17%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
+ R + +IGKGG + ++++ + V + G +R++ +SG A
Sbjct: 108 IHIRAVISSPEAATIIGKGGENVSNIRKMSNAKCTVSDYQKGAVERILTVSGIAFGLIIR 167
Query: 377 SAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIR 436
+ + + T ++ P RLL+ IG ++GKGG+ I E+++ SGA R
Sbjct: 168 TLNNEPLGEASTASSKTYP--------LRLLIPHILIGSIIGKGGARIREIQEASGA--R 217
Query: 437 ILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLD 496
+ D +SE VV+ G +AV A + + + L P +
Sbjct: 218 LNASDSCLPMSSERSLVVM--GVADAVHIATYYVGSTLLEQLNE----RFGGPAASAYAT 271
Query: 497 QV-SPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIH--- 552
+ +P S G ++ P YS S H P ++ H D A HH+
Sbjct: 272 RSGAPAGSIPGGMQVVP---YSPQPASGHYGR-------PENYGRHQDRRA--HHMPPAA 319
Query: 553 ------------RPGMP-------------PHMPDMKP--WGPQGLMEVGGPMGFPDFVG 585
P MP PH P GPQ GGP G P G
Sbjct: 320 YPPHYPHNAAPPNPAMPMQYGGQQAAYGGAPHATQHMPPHVGPQ---PHGGPQGPPMQHG 376
Query: 586 PPHRRVP--VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPE 643
P + + +P +V I G+ G + +IRQ+S + I I +P+ + E ++ I+GT E
Sbjct: 377 MPGGPLTQQIYIPNDMVGAIIGKGGQKINEIRQMSGSVIKINEPQDNSNERLVTITGTEE 436
Query: 644 QTHAAQSLIQAFVMSE 659
A ++ + + SE
Sbjct: 437 CNRMALYMLYSRLESE 452
Score = 42.4 bits (98), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 24/101 (23%)
Query: 277 GAPYATGHRDVADIHLPMPPSI-PKFH--------ESGVLDRPKPSPEILTFRLLCHDER 327
GAP+AT H MPP + P+ H + G+ P LT ++ ++
Sbjct: 348 GAPHATQH---------MPPHVGPQPHGGPQGPPMQHGMPGGP------LTQQIYIPNDM 392
Query: 328 VGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
VG +IGKGG I ++Q +G IK+ E + +RL+ I+G
Sbjct: 393 VGAIIGKGGQKINEIRQMSGSVIKINEPQDNSNERLVTITG 433
Score = 39.7 bits (91), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 42 FPGG-IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASD 99
PGG + ++ P + +IGK G+ +++I Q +G I++ E S+ERLV I ++
Sbjct: 377 MPGGPLTQQIYIPNDMVGAIIGKGGQKINEIRQMSGSVIKINEPQDNSNERLVTITGTE 435
>gi|354484184|ref|XP_003504270.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 1 [Cricetulus griseus]
gi|344239809|gb|EGV95912.1| Insulin-like growth factor 2 mRNA-binding protein 2 [Cricetulus
griseus]
Length = 530
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 148/331 (44%), Gaps = 58/331 (17%)
Query: 178 DQENTKSSKFV-LRLLVLSTQVGCLLGKGGCVIKQID-----KLPTCALAS------DEV 225
+ E+TK ++ V L++L + VG L+GK G +K+I+ K+ +L +
Sbjct: 196 EAEDTKLAEEVPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERT 255
Query: 226 VQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHR 285
+ + G +D A I +L + D ++ ++ +P ++S+ G ++TG
Sbjct: 256 ITVKGTIDACANAEMEIMKKLREAFENDMLAV----NQQANLIPGLNLSALGI-FSTGLS 310
Query: 286 DVADIHLP--MPPSIPKFH----ESGVL------------DRPKPSPEILTFRLLCHDER 327
+ P +PPS+P +H SG PE T L +
Sbjct: 311 VLPPPAGPRGVPPSVP-YHPFASHSGYFPNMYPHHHFGPFPHHHSYPEQETVNLFIPTQA 369
Query: 328 VGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRISAPQDAVLRV 386
VG +IGK GA I+ L + G IK+ A +R+++I+GP +A +
Sbjct: 370 VGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPP----------EAQFKA 419
Query: 387 QTRIARAIPD------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGK 440
Q RI + + E + + V S+ G ++GKGG + E++ L+ A + I+ +
Sbjct: 420 QGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPR 478
Query: 441 DQIPKCASENEEVVL-INGEFEAVQEALFQI 470
DQ P EN EV++ I G F A Q A +I
Sbjct: 479 DQTP---DENAEVIVRIIGHFFASQTAQRKI 506
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 137/342 (40%), Gaps = 53/342 (15%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV-MEAVSGTEDRLIVISGPAHPDDRIS 377
R+L + VG +IGK G I+++ ++T + + + SG ++ + I A P+
Sbjct: 127 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIH--ATPEGTSE 184
Query: 378 APQDAVLRVQ-----TRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSG 432
A + + +Q T++A +P ++L + +G L+GK G + ++ +G
Sbjct: 185 ACRMILEIMQKEAEDTKLAEEVP--------LKILAHNGLVGRLIGKEGRNLKKIEHETG 236
Query: 433 AYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNP 492
I I + E + + G +A A +I +LR F D ++N+ N
Sbjct: 237 TKITISSLQDL--SIYNPERTITVKGTIDACANAEMEIMKKLREAFENDML-AVNQQANL 293
Query: 493 TFLDQVSPFPSF-IGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHI 551
+S F G L PP GP G PP +HP HS + ++
Sbjct: 294 IPGLNLSALGIFSTGLSVLPPPA-----GPR--------GVPPSVPYHPFASHSGYFPNM 340
Query: 552 HRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACL 611
+ P + P V + +P V I G+ GA +
Sbjct: 341 YPHHHFGPFPHHHSY-------------------PEQETVNLFIPTQAVGAIIGKKGAHI 381
Query: 612 KQIRQISDAKITITDPK-PGATETVIIISGTPEQTHAAQSLI 652
KQ+ + + A I I + P +E ++II+G PE AQ I
Sbjct: 382 KQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI 423
>gi|52545962|emb|CAH56186.1| hypothetical protein [Homo sapiens]
Length = 198
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 93/203 (45%), Gaps = 35/203 (17%)
Query: 294 MPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVM 353
M P P+F +S E T L VG +IGK G I+ L + G IK+
Sbjct: 12 MTPPYPQFEQS----------ETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIA 61
Query: 354 EAVS-GTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPD------NREQTVMTRL 406
A + + R+++I+GP +A + Q RI I + E + +
Sbjct: 62 PAEAPDAKVRMVIITGPP----------EAQFKAQGRIYGKIKEENFVSPKEEVKLEAHI 111
Query: 407 LVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVL-INGEFEAVQE 465
S G ++GKGG + E++ LS A + ++ +DQ P EN++VV+ I G F A Q
Sbjct: 112 RAPSFAAGRVIGKGGKTVNELQNLSSAEV-VVPRDQTP---DENDQVVVKITGHFYACQV 167
Query: 466 A---LFQITTRLRHHFFRDAFPS 485
A + +I T+++ H + A S
Sbjct: 168 AQRKIQEILTQVKQHQQQKALQS 190
>gi|403418461|emb|CCM05161.1| predicted protein [Fibroporia radiculosa]
Length = 326
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 136/348 (39%), Gaps = 63/348 (18%)
Query: 315 EILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDD 374
+ LT R L + G +IGK G + L+ TG V + V G +R++ +SG
Sbjct: 26 DTLTLRALVSTKDAGVIIGKAGKNVADLRDHTGVKAGVSKVVPGVHERVLTVSGSVEGVA 85
Query: 375 RISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAY 434
+ A + L + P++ RLL++ N +G ++G+ G I ++ SGA
Sbjct: 86 KAYALIVSQLVSANPSSPVSPNSPPPNTAIRLLISHNLMGSVIGRNGLKIKAIQDASGAR 145
Query: 435 IRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTF 494
+ + KD +P+ E +V + G E++ A+ +I L + R + +P
Sbjct: 146 M-VASKDMLPQS---TERIVEVQGSSESIGRAIEEIGRCLLEDWERGQGTVL---FHPGS 198
Query: 495 LDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRP 554
D+ S GRR + Y+ DA G P
Sbjct: 199 GDERS------GRRSSNASRRYNG--------DAGRGRTSP------------------- 225
Query: 555 GMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQI 614
P+ P +P R + +P +V I G +G + +I
Sbjct: 226 --SPNAPLQQP--------------------TNLRTQNISIPSDMVGCIIGRNGTKITEI 263
Query: 615 RQISDAKITIT-DPKPGATETVIIISGTPEQTHAAQSLIQAFVMSETE 661
R++S +KI+I +P E + I GTPE A L+ + SE E
Sbjct: 264 RRLSGSKISIAKEPHDETGERMFTIVGTPEANEKALFLLYNQLESEKE 311
>gi|291400299|ref|XP_002716509.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 2-like
isoform 1 [Oryctolagus cuniculus]
Length = 599
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 111/501 (22%), Positives = 197/501 (39%), Gaps = 126/501 (25%)
Query: 14 DDNHTEPNGKEKSQKLAGDYSENQPSKSFPGG--------IMFRVLCPVSKIDGVIGKDG 65
D+ + P+ +++Q+ GD+S + + PGG R+L P + +IGK+G
Sbjct: 157 DEEVSSPSPPQRAQR--GDHSSREQGHA-PGGSSQARQIDFPLRILVPTQFVGAIIGKEG 213
Query: 66 EMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASV 125
+ I++ T + I R EN+G E V
Sbjct: 214 LTIKNITKQTQSRV-------------------------------DIHRKENSGAAEKPV 242
Query: 126 ADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSS 185
+ EG+ +A ++ E M + ET++A++
Sbjct: 243 TIHA-------TPEGT---------------SEACRMILEIMQKEADETKLAEE------ 274
Query: 186 KFVLRLLVLSTQVGCLLGKGGCVIKQID-----KLPTCALAS------DEVVQITGEVDT 234
L++L + VG L+GK G +K+I+ K+ +L + + + G V+
Sbjct: 275 -IPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEA 333
Query: 235 VRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVAD----- 289
A I +L + D ++ ++ +P ++S+ G ++TG +
Sbjct: 334 CASAEAEIMKKLREAFENDMLAV----NQQANLIPGLNLSALGI-FSTGLSMLPPPAGPR 388
Query: 290 ------------IHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGA 337
H S+ H+ G PE L + VG +IGK GA
Sbjct: 389 GAPPTAPYHPFATHSGYFSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGA 448
Query: 338 IIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPD 396
I+ L + G IK+ A +R+++I+GP +A + Q RI + +
Sbjct: 449 HIKQLARFAGASIKIAPAEGPDVSERMVIITGPP----------EAQFKAQGRIFGKLKE 498
Query: 397 ------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASEN 450
E + + V S+ G ++GKGG + E++ L+ A + I+ +DQ P EN
Sbjct: 499 ENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP---DEN 554
Query: 451 EEVVL-INGEFEAVQEALFQI 470
EEV++ I G F A Q A +I
Sbjct: 555 EEVIVRIIGHFFASQTAQRKI 575
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 141/343 (41%), Gaps = 55/343 (16%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV-MEAVSGTEDRLIVISGPAHPDDRIS 377
R+L + VG +IGK G I+++ ++T + + + SG ++ + I A P+
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIH--ATPEGTSE 253
Query: 378 APQDAVLRV------QTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLS 431
A + +L + +T++A IP ++L + +G L+GK G + ++ +
Sbjct: 254 ACR-MILEIMQKEADETKLAEEIP--------LKILAHNGLVGRLIGKEGRNLKKIEHET 304
Query: 432 GAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLN 491
G I I + E + + G EA A +I +LR F D ++N+ N
Sbjct: 305 GTKITISSLQDL--SIYNPERTITVKGTVEACASAEAEIMKKLREAFENDML-AVNQQAN 361
Query: 492 PTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHI 551
I LS G++S G PP +HP HS + +
Sbjct: 362 ------------LIPGLNLSALGIFSTGLSMLPPPAGPRGAPPTAPYHPFATHSGYFSSL 409
Query: 552 HRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRR-VPVVVPRSLVPIIQGEDGAC 610
+ PH +GP FP P + V + +P V I G+ GA
Sbjct: 410 Y-----PH----HQFGP-----------FPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAH 449
Query: 611 LKQIRQISDAKITITDPK-PGATETVIIISGTPEQTHAAQSLI 652
+KQ+ + + A I I + P +E ++II+G PE AQ I
Sbjct: 450 IKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI 492
>gi|226485613|emb|CAX75226.1| Heterogeneous nuclear ribonucleoprotein K [Schistosoma japonicum]
Length = 297
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 120/299 (40%), Gaps = 45/299 (15%)
Query: 394 IPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEV 453
+ +NR++ V RLLV +Q GC++G+GG I E+R+ SG + L Q+ C S + V
Sbjct: 1 MQNNRDEGVDLRLLVHYSQAGCVIGRGGYKIKELREQSG--LHTLKVYQML-CPSSTDRV 57
Query: 454 VLINGEFEAVQEALFQITTRL--------RHHF---FRDAFPSINRPLNPTFLDQVSPFP 502
+ + G+ V L I L R ++ D F S+ +Q S
Sbjct: 58 IQLVGDVGKVLNCLQSIAELLEGAPPKGSRQNYDARNVDEFISLEYG-GWGLGNQGSGLN 116
Query: 503 SFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPD 562
GR ++ +N+ + + G GS + +A ++ G+P H
Sbjct: 117 MIRGRSNVAN----TNYSQNNILTTGIFGGGASGSAGRNGGQTASVNQALAGGLP-HASA 171
Query: 563 MKPWGPQGLMEVGGP---------------------MGFPDFVG----PPHRRVPVVVPR 597
G GGP G P+ + P V V
Sbjct: 172 AAMLAATGGQTTGGPNTGPARDAAATAAAMVAAGFMRGLPNRMAMSLLTPTTSTQVSVSN 231
Query: 598 SLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFV 656
++ I G G + Q+R S+A I I+ +PG + +I I+GTPEQ AQ L+Q V
Sbjct: 232 KMIGAIMGRSGCRINQVRHESNADIKISKLEPGVEDRIITITGTPEQIQNAQFLLQMCV 290
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 11/82 (13%)
Query: 180 ENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDK---LPT-------CALASDEVVQIT 229
+N + LRLLV +Q GC++G+GG IK++ + L T C ++D V+Q+
Sbjct: 2 QNNRDEGVDLRLLVHYSQAGCVIGRGGYKIKELREQSGLHTLKVYQMLCPSSTDRVIQLV 61
Query: 230 GEVDTVRKALKLISHQLLDNSP 251
G+V V L+ I+ +LL+ +P
Sbjct: 62 GDVGKVLNCLQSIA-ELLEGAP 82
>gi|242024312|ref|XP_002432572.1| heterogeneous nuclear ribonucleoprotein k, putative [Pediculus
humanus corporis]
gi|212518032|gb|EEB19834.1| heterogeneous nuclear ribonucleoprotein k, putative [Pediculus
humanus corporis]
Length = 365
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 83/179 (46%), Gaps = 24/179 (13%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISA 378
RLL + G +IGKGG I L+ E + V + G E L V +A
Sbjct: 25 IRLLIPSKVAGSIIGKGGHNISKLRTEHNASVTVPDC-PGPERILTV-----------AA 72
Query: 379 PQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRIL 438
D +LRV + I +P N E + R+LV +Q GC++GKGG I E+R+ +GA I+I
Sbjct: 73 DLDTMLRVVSEI---LP-NLEDVIDIRMLVHQSQAGCIIGKGGLKIKELREKTGARIKIY 128
Query: 439 GKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQ 497
C + +V ING+ +A+ + L+ + +N P +P D+
Sbjct: 129 SN----CCPQSTDRIVQINGKGNLCVDAIRECMELLKTSPIK----GMNNPYDPHNFDE 179
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 315 EILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVM-EAVSGTEDRLIVISGPAH 371
+++ R+L H + G +IGKGG I+ L+++TG IK+ + DR++ I+G +
Sbjct: 90 DVIDIRMLVHQSQAGCIIGKGGLKIKELREKTGARIKIYSNCCPQSTDRIVQINGKGN 147
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 13/67 (19%)
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQIDKLP---------TCALASDEVVQITGE----VDTV 235
+R+LV +Q GC++GKGG IK++ + C ++D +VQI G+ VD +
Sbjct: 94 IRMLVHQSQAGCIIGKGGLKIKELREKTGARIKIYSNCCPQSTDRIVQINGKGNLCVDAI 153
Query: 236 RKALKLI 242
R+ ++L+
Sbjct: 154 RECMELL 160
>gi|195440454|ref|XP_002068057.1| GK10610 [Drosophila willistoni]
gi|194164142|gb|EDW79043.1| GK10610 [Drosophila willistoni]
Length = 363
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 78/164 (47%), Gaps = 26/164 (15%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RL+ + VG +IGK G I+ ++E+G I + + +R++ +SG
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDG--SCPERIVTVSGTT------ 75
Query: 377 SAPQDAVLRVQTRIARAIPDNREQ----------TVMTRLLVASNQIGCLLGKGGSIIAE 426
A+ T I + + Q + RL+V ++Q G L+GK GS I E
Sbjct: 76 ----SAIFSAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKE 131
Query: 427 MRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
+R+ +G I++ + +P + E V ++G E + + ++QI
Sbjct: 132 IRQTTGCSIQV-ASEMLP---NSTERAVTLSGSAEQITQCIYQI 171
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 55/98 (56%), Gaps = 5/98 (5%)
Query: 377 SAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIR 436
+A A+ Q R A A NR Q + V+++ IGC++GKGG+ IAE+R++SGA IR
Sbjct: 245 TAALAALAGSQLRTANA---NRAQQQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIR 301
Query: 437 ILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRL 474
I ++ + + + I+G ++V A + I R+
Sbjct: 302 ISNCEE--REGGNTDRTITISGNPDSVALAQYLINMRI 337
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 110/257 (42%), Gaps = 41/257 (15%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI 212
TS + A L+ ++ E ++ D ++ +RL+V ++Q G L+GK G IK+I
Sbjct: 75 TSAIFSAFTLITKKFEEWC--SQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEI 132
Query: 213 DKLPTCAL---------ASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNP-- 261
+ C++ +++ V ++G + + + + I +L++ PR +IP P
Sbjct: 133 RQTTGCSIQVASEMLPNSTERAVTLSGSAEQITQCIYQICLVMLESPPRG-ATIPYRPKP 191
Query: 262 --TGPSHPLPDHSVSSQGAPYATGHRDVAD----------IHLPMPPSIPKFHESGVLDR 309
TGP + + QG YA ++VA + P S + + L
Sbjct: 192 QVTGPVILANGQAFTIQGN-YAVPTQEVAKNPLASLAALGLAGMNPASTGGINHTAALAA 250
Query: 310 PKPS---------PEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVM---EAVS 357
S + + ++ +G +IGKGG I ++Q +G I++ E
Sbjct: 251 LAGSQLRTANANRAQQQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREG 310
Query: 358 GTEDRLIVISGPAHPDD 374
G DR I ISG +PD
Sbjct: 311 GNTDRTITISG--NPDS 325
>gi|14165437|ref|NP_112553.1| heterogeneous nuclear ribonucleoprotein K isoform a [Homo sapiens]
gi|14165439|ref|NP_002131.2| heterogeneous nuclear ribonucleoprotein K isoform a [Homo sapiens]
gi|197101649|ref|NP_001126766.1| heterogeneous nuclear ribonucleoprotein K [Pongo abelii]
gi|388454448|ref|NP_001253875.1| heterogeneous nuclear ribonucleoprotein K [Macaca mulatta]
gi|114625208|ref|XP_001155079.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 18
[Pan troglodytes]
gi|114625210|ref|XP_001155315.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 22
[Pan troglodytes]
gi|149758457|ref|XP_001489114.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 1
[Equus caballus]
gi|296189573|ref|XP_002742828.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 1
[Callithrix jacchus]
gi|296189575|ref|XP_002742829.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 2
[Callithrix jacchus]
gi|296189579|ref|XP_002742831.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 4
[Callithrix jacchus]
gi|301758414|ref|XP_002915066.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like
[Ailuropoda melanoleuca]
gi|332236647|ref|XP_003267511.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 1
[Nomascus leucogenys]
gi|332236651|ref|XP_003267513.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 3
[Nomascus leucogenys]
gi|344272026|ref|XP_003407837.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein K-like [Loxodonta africana]
gi|395819298|ref|XP_003783031.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K [Otolemur
garnettii]
gi|397475599|ref|XP_003809221.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 1 [Pan
paniscus]
gi|397475603|ref|XP_003809223.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 3 [Pan
paniscus]
gi|397475609|ref|XP_003809226.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 6 [Pan
paniscus]
gi|402897753|ref|XP_003911909.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 1
[Papio anubis]
gi|402897755|ref|XP_003911910.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 2
[Papio anubis]
gi|402897761|ref|XP_003911913.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 5
[Papio anubis]
gi|403300938|ref|XP_003941169.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 1
[Saimiri boliviensis boliviensis]
gi|403300942|ref|XP_003941171.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 3
[Saimiri boliviensis boliviensis]
gi|403300944|ref|XP_003941172.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 4
[Saimiri boliviensis boliviensis]
gi|410978211|ref|XP_003995489.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 1
[Felis catus]
gi|410978213|ref|XP_003995490.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 2
[Felis catus]
gi|426362129|ref|XP_004048233.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 1
[Gorilla gorilla gorilla]
gi|426362131|ref|XP_004048234.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 2
[Gorilla gorilla gorilla]
gi|75056718|sp|Q5R5H8.1|HNRPK_PONAB RecName: Full=Heterogeneous nuclear ribonucleoprotein K;
Short=hnRNP K
gi|75075750|sp|Q4R4M6.1|HNRPK_MACFA RecName: Full=Heterogeneous nuclear ribonucleoprotein K;
Short=hnRNP K
gi|12653175|gb|AAH00355.1| Heterogeneous nuclear ribonucleoprotein K [Homo sapiens]
gi|13879427|gb|AAH06694.1| Hnrpk protein [Mus musculus]
gi|26347481|dbj|BAC37389.1| unnamed protein product [Mus musculus]
gi|38197650|gb|AAH61867.1| Hnrpk protein [Rattus norvegicus]
gi|48145659|emb|CAG33052.1| HNRPK [Homo sapiens]
gi|55732576|emb|CAH92988.1| hypothetical protein [Pongo abelii]
gi|58475965|gb|AAH89328.1| Hnrpk protein [Mus musculus]
gi|61359196|gb|AAX41682.1| heterogeneous nuclear ribonucleoprotein K [synthetic construct]
gi|67971214|dbj|BAE01949.1| unnamed protein product [Macaca fascicularis]
gi|74139420|dbj|BAE40851.1| unnamed protein product [Mus musculus]
gi|74141211|dbj|BAE35915.1| unnamed protein product [Mus musculus]
gi|74178242|dbj|BAE29905.1| unnamed protein product [Mus musculus]
gi|74183280|dbj|BAE22563.1| unnamed protein product [Mus musculus]
gi|74185026|dbj|BAE39121.1| unnamed protein product [Mus musculus]
gi|119583081|gb|EAW62677.1| heterogeneous nuclear ribonucleoprotein K, isoform CRA_c [Homo
sapiens]
gi|123979648|gb|ABM81653.1| heterogeneous nuclear ribonucleoprotein K [synthetic construct]
gi|123994453|gb|ABM84828.1| heterogeneous nuclear ribonucleoprotein K [synthetic construct]
gi|158256108|dbj|BAF84025.1| unnamed protein product [Homo sapiens]
gi|197692227|dbj|BAG70077.1| heterogeneous nuclear ribonucleoprotein K isoform a [Homo sapiens]
gi|197692481|dbj|BAG70204.1| heterogeneous nuclear ribonucleoprotein K isoform a [Homo sapiens]
gi|351696771|gb|EHA99689.1| Heterogeneous nuclear ribonucleoprotein K [Heterocephalus glaber]
gi|380812328|gb|AFE78038.1| heterogeneous nuclear ribonucleoprotein K isoform a [Macaca
mulatta]
gi|380812330|gb|AFE78039.1| heterogeneous nuclear ribonucleoprotein K isoform a [Macaca
mulatta]
gi|410337439|gb|JAA37666.1| heterogeneous nuclear ribonucleoprotein K [Pan troglodytes]
gi|417401379|gb|JAA47578.1| Putative polyc-binding hnrnp-k protein hrb57a/hnrnp [Desmodus
rotundus]
Length = 464
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 97/443 (21%), Positives = 156/443 (35%), Gaps = 101/443 (22%)
Query: 301 FHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTE 360
E R + + E++ R+L + G VIGKGG I++L+ + + V ++ SG E
Sbjct: 27 MEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDS-SGPE 85
Query: 361 DRLIVISGPAH-----------------------PDDRISAPQDAVLRVQTRIARAIPDN 397
R++ IS ++ DAV + + + +
Sbjct: 86 -RILSISADIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFD 144
Query: 398 REQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLIN 457
E RLL+ + G ++G G+ I E+R+ + I++ + C + VVLI
Sbjct: 145 CE----LRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQE----CCPHSTDRVVLIG 196
Query: 458 GEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSPFPSF---IGRRELSPPG 514
G+ + V E + I + + +P +P F D+ + F R P G
Sbjct: 197 GKPDRVVECIKIILDLISESPIKGR----AQPYDPNFYDETYDYGGFTMMFDDRRGRPVG 252
Query: 515 MYSNFGPSFHKF-DAVGGPPPPGSFHPHDDHSAF-------------------------- 547
F + GG P P S +DD S
Sbjct: 253 FPMRGRGGFDRMPPGRGGRPMPPSRRDYDDMSPRRGPPPPPPGRGGRGGSRARNLPLPPP 312
Query: 548 -------MHHIHRPGMPPHMPD--------------MKPWGPQGLMEVGGPMGFPDF--- 583
+ R G P D + W P P G +
Sbjct: 313 PPPRGGDLMAYDRRGRPGDRYDGMVGFSADETWDSAIDTWSPSEWQMAYEPQGGSGYDYS 372
Query: 584 ----------VGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATE 633
+G P V +P+ L I G+ G +KQIR S A I I +P G+ +
Sbjct: 373 YAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSED 432
Query: 634 TVIIISGTPEQTHAAQSLIQAFV 656
+I I+GT +Q AQ L+Q V
Sbjct: 433 RIITITGTQDQIQNAQYLLQNSV 455
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 38/63 (60%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
I +V P +IGK G+ + QI ++G +I+++E + GS++R++ I + ++ + +
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNA 447
Query: 106 ENL 108
+ L
Sbjct: 448 QYL 450
>gi|59381084|gb|AAW84289.1| heterogeneous nuclear ribonucleoprotein K transcript variant [Homo
sapiens]
Length = 464
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 99/443 (22%), Positives = 158/443 (35%), Gaps = 101/443 (22%)
Query: 301 FHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTE 360
E R + + E++ R+L + G VIGKGG I++L+ + + V ++ SG E
Sbjct: 27 MEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDS-SGPE 85
Query: 361 DRLIVIS-------------------GPAHPD----DRISAPQDAVLRVQTRIARAIPDN 397
R++ IS G P ++ DAV + + + +
Sbjct: 86 -RILSISTDIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFD 144
Query: 398 REQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLIN 457
E RLL+ + G ++G G+ I E+R+ + I++ + C + VVLI
Sbjct: 145 CE----LRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQE----CCPHSTDRVVLIG 196
Query: 458 GEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSPFPSF---IGRRELSPPG 514
G+ + V E + I + + +P +P F D+ + F R P G
Sbjct: 197 GKPDRVVECIKIILDLISESPIKGR----AQPYDPNFYDETYDYGGFTMMFDDRRGRPVG 252
Query: 515 MYSNFGPSFHKF-DAVGGPPPPGSFHPHDDHSAF-------------------------- 547
F + GG P P S +DD S
Sbjct: 253 FPMRGRGGFDRMPPGRGGRPMPPSRRDYDDMSPRRGPPPPPPGRGGRGGSRARNLPLPPP 312
Query: 548 -------MHHIHRPGMPPHMPD--------------MKPWGPQGLMEVGGPMGFPDF--- 583
+ R G P D + W P P G +
Sbjct: 313 PPPRGGDLMAYDRRGRPGDRYDGMVGFSADETWDSAIDTWSPSEWQMAYEPQGGSGYDYS 372
Query: 584 ----------VGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATE 633
+G P V +P+ L I G+ G +KQIR S A I I +P G+ +
Sbjct: 373 YAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSED 432
Query: 634 TVIIISGTPEQTHAAQSLIQAFV 656
+I I+GT +Q AQ L+Q V
Sbjct: 433 RIITITGTQDQIQNAQYLLQNSV 455
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 38/63 (60%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
I +V P +IGK G+ + QI ++G +I+++E + GS++R++ I + ++ + +
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNA 447
Query: 106 ENL 108
+ L
Sbjct: 448 QYL 450
>gi|291219869|ref|NP_001025048.2| neuro-oncological ventral antigen 2 [Mus musculus]
Length = 492
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 90/177 (50%), Gaps = 28/177 (15%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA---VSGTEDRLIVISGPAHPDDR 375
++L G +IGKGG I L++ETG IK+ ++ GT +R+ ++ G A +
Sbjct: 35 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 94
Query: 376 ISA---------PQDA-------VLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGK 419
+ + PQ +L+ QT + PD +Q +L+V ++ G ++GK
Sbjct: 95 VHSFIAEKVREIPQAMTKPEVVNILQPQTTMN---PDRAKQA---KLIVPNSTAGLIIGK 148
Query: 420 GGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRH 476
GG+ + + + SGA++++ Q P+ + E VV ++GE E V +A+ I +++
Sbjct: 149 GGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQE 202
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 591 VPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPK---PGATETVIIISGTPEQTHA 647
V + VP +LV I G+ G L + ++++ A+I I+ PG + I+G+P T A
Sbjct: 409 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQA 468
Query: 648 AQSLIQAFVMSE 659
AQ LI V E
Sbjct: 469 AQYLISQRVTYE 480
Score = 39.3 bits (90), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 403 MTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQ-IPKCASENEEVVLINGEFE 461
+ + V N +G +LGKGG + E ++L+GA I+I K + +P + N V I G
Sbjct: 408 LVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLP--GTRNRRVT-ITGSPA 464
Query: 462 AVQEALFQITTRLRHH 477
A Q A + I+ R+ +
Sbjct: 465 ATQAAQYLISQRVTYE 480
>gi|281348784|gb|EFB24368.1| hypothetical protein PANDA_018514 [Ailuropoda melanoleuca]
Length = 346
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 98/202 (48%), Gaps = 34/202 (16%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA---VSGTEDRLIVISGPAHPDDR 375
++L G +IGKGG I L++ETG IK+ ++ GT +R+ ++ G A +
Sbjct: 35 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 94
Query: 376 ISA---------PQDA-------VLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGK 419
+ + PQ +L+ QT + PD +Q +L+V ++ G ++GK
Sbjct: 95 VHSFIAEKVREIPQAMTKPEVVNILQPQTTMN---PDRAKQA---KLIVPNSTAGLIIGK 148
Query: 420 GGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFF 479
GG+ + + + SGA++++ Q P+ + E VV ++GE E V +A+ I +++
Sbjct: 149 GGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQED-- 203
Query: 480 RDAFPSINRPLNPTFLDQVSPF 501
P + LN ++ + P
Sbjct: 204 ----PQSSSCLNISYANVAGPV 221
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 77/371 (20%), Positives = 142/371 (38%), Gaps = 104/371 (28%)
Query: 165 ERMVEVEPETEVADQENT-KSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKLPTCAL--- 220
+R +E PE + NT + ++ L++L+ S G ++GKGG I Q+ K +
Sbjct: 10 KRPLETPPEVVCTKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLS 69
Query: 221 --------ASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHS 272
++ V + G + + I+ ++ + IP T P
Sbjct: 70 KSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVRE--------IPQAMTKP-------- 113
Query: 273 VSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVI 332
+V +I P P DR K + +L+ + G +I
Sbjct: 114 -------------EVVNILQPQTTMNP--------DRAKQA------KLIVPNSTAGLII 146
Query: 333 GKGGAIIRSLKQETGCDIKVMEAVSGT--EDRLIVISG-PAHPDDRISA--------PQD 381
GKGGA ++++ +++G +++ + G ++R++ +SG P +SA PQ
Sbjct: 147 GKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQS 206
Query: 382 A------VLRVQTRIARAIPDN----------------------------REQTVMTRLL 407
+ V +A + P + +
Sbjct: 207 SSCLNISYANVAGPVANSNPTGSPYASPADVLPAAAGAAGGFLTAEKLAAESAKELVEIA 266
Query: 408 VASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQ-IPKCASENEEVVLINGEFEAVQEA 466
V N +G +LGKGG + E ++L+GA I+I K + +P + N V I G A Q A
Sbjct: 267 VPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLP--GTRNRRVT-ITGSPAATQAA 323
Query: 467 LFQITTRLRHH 477
+ I+ R+ +
Sbjct: 324 QYLISQRVTYE 334
Score = 40.0 bits (92), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 591 VPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPK---PGATETVIIISGTPEQTHA 647
V + VP +LV I G+ G L + ++++ A+I I+ PG + I+G+P T A
Sbjct: 263 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQA 322
Query: 648 AQSLIQAFVMSE 659
AQ LI V E
Sbjct: 323 AQYLISQRVTYE 334
>gi|170048061|ref|XP_001851517.1| nova [Culex quinquefasciatus]
gi|167870269|gb|EDS33652.1| nova [Culex quinquefasciatus]
Length = 534
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 96/197 (48%), Gaps = 23/197 (11%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA---VSGTEDRLIVISGPAHPDDR 375
F+ L G +IGKGG I SL+++ G +K+ +A GT +R+ +ISG D
Sbjct: 29 FKTLVPSVAAGAIIGKGGETIASLQKDAGARVKMSKAHDFYPGTSERVCLISGTV---DG 85
Query: 376 ISAPQDAVL---RVQTRIARAIPDN-----REQTVMTRLLVASNQIGCLLGKGGSIIAEM 427
I D ++ R + + +A+ + E+ ++LV ++ G ++GK G+ I ++
Sbjct: 86 ILTVLDFIIDKIREKPDMTKALTEADAKQAAERDKQVKVLVPNSTAGMIIGKAGAFIKQI 145
Query: 428 RKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSIN 487
++ SG+Y++I Q PK + E + I GE E + A I +++ PS
Sbjct: 146 KEDSGSYVQI---SQKPKELTLQERCITIIGEKENNKIACKMILSKIVED------PSSG 196
Query: 488 RPLNPTFLDQVSPFPSF 504
LN ++ D P +F
Sbjct: 197 SCLNVSYADINGPVANF 213
>gi|195158519|ref|XP_002020133.1| GL13824 [Drosophila persimilis]
gi|194116902|gb|EDW38945.1| GL13824 [Drosophila persimilis]
Length = 554
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 90/187 (48%), Gaps = 23/187 (12%)
Query: 329 GGVIGKGGAIIRSLKQETGCDIKVMEA---VSGTEDRLIVISGPAHP--------DDRIS 377
G +IGKGG I SL+++TG +K+ ++ GT +R+ +I+G D+I
Sbjct: 84 GAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMVVLDFIMDKIR 143
Query: 378 APQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRI 437
D ++ I +E+ ++LV ++ G ++GKGG+ I ++++ SG+Y++I
Sbjct: 144 EKPDLTTKI---IDAESKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEDSGSYVQI 200
Query: 438 LGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQ 497
Q PK S E + I G+ E + A I +++ P LN ++ D
Sbjct: 201 ---SQKPKDVSLQERCITIIGDKENNKNACKMILSKIVED------PQSGTCLNVSYADV 251
Query: 498 VSPFPSF 504
P +F
Sbjct: 252 SGPVANF 258
>gi|301786262|ref|XP_002928556.1| PREDICTED: RNA-binding protein Nova-2-like [Ailuropoda melanoleuca]
Length = 329
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 98/202 (48%), Gaps = 34/202 (16%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA---VSGTEDRLIVISGPAHPDDR 375
++L G +IGKGG I L++ETG IK+ ++ GT +R+ ++ G A +
Sbjct: 35 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 94
Query: 376 ISA---------PQDA-------VLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGK 419
+ + PQ +L+ QT + PD +Q +L+V ++ G ++GK
Sbjct: 95 VHSFIAEKVREIPQAMTKPEVVNILQPQTTMN---PDRAKQA---KLIVPNSTAGLIIGK 148
Query: 420 GGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFF 479
GG+ + + + SGA++++ Q P+ + E VV ++GE E V +A+ I +++
Sbjct: 149 GGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQED-- 203
Query: 480 RDAFPSINRPLNPTFLDQVSPF 501
P + LN ++ + P
Sbjct: 204 ----PQSSSCLNISYANVAGPV 221
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 77/354 (21%), Positives = 142/354 (40%), Gaps = 87/354 (24%)
Query: 165 ERMVEVEPETEVADQENT-KSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKLPTCAL--- 220
+R +E PE + NT + ++ L++L+ S G ++GKGG I Q+ K +
Sbjct: 10 KRPLETPPEVVCTKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLS 69
Query: 221 --------ASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHS 272
++ V + G + + I+ ++ + IP T P
Sbjct: 70 KSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVRE--------IPQAMTKP-------- 113
Query: 273 VSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVI 332
+V +I P P DR K + +L+ + G +I
Sbjct: 114 -------------EVVNILQPQTTMNP--------DRAKQA------KLIVPNSTAGLII 146
Query: 333 GKGGAIIRSLKQETGCDIKVMEAVSGT--EDRLIVISG-PAHPDDRISA--------PQD 381
GKGGA ++++ +++G +++ + G ++R++ +SG P +SA PQ
Sbjct: 147 GKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQS 206
Query: 382 A------VLRVQTRIARAIPDN-----------REQTVMTRLLVASNQIGCLLGKGGSII 424
+ V +A + P + + V N +G +LGKGG +
Sbjct: 207 SSCLNISYANVAGPVANSNPTGSPYASPADLAAESAKELVEIAVPENLVGAILGKGGKTL 266
Query: 425 AEMRKLSGAYIRILGKDQ-IPKCASENEEVVLINGEFEAVQEALFQITTRLRHH 477
E ++L+GA I+I K + +P + N V I G A Q A + I+ R+ +
Sbjct: 267 VEYQELTGARIQISKKGEFLP--GTRNRRVT-ITGSPAATQAAQYLISQRVTYE 317
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 111/295 (37%), Gaps = 53/295 (17%)
Query: 405 RLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRI-LGKDQIPKCASENEEVVLINGEFEAV 463
++L+ S G ++GKGG I +++K +GA I++ KD P E V L+ G EA+
Sbjct: 36 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYP---GTTERVCLVQGTAEAL 92
Query: 464 QEALFQITTRLR---HHFFRDAFPSINRP---LNPTFLDQV------SPFPSFIGRRELS 511
I ++R + +I +P +NP Q S IG+ +
Sbjct: 93 NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 152
Query: 512 PPGMYSNFGPSFH------------KFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPH 559
+ G + V G P H SA + +
Sbjct: 153 VKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPE----QVHKAVSAIVQKVQEDPQSSS 208
Query: 560 MPDMKPWGPQGLMEVGGPMGFPDFVGPPHRR------------VPVVVPRSLVPIIQGED 607
++ V GP+ + G P+ V + VP +LV I G+
Sbjct: 209 CLNIS------YANVAGPVANSNPTGSPYASPADLAAESAKELVEIAVPENLVGAILGKG 262
Query: 608 GACLKQIRQISDAKITITDPK---PGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
G L + ++++ A+I I+ PG + I+G+P T AAQ LI V E
Sbjct: 263 GKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQYLISQRVTYE 317
>gi|170586586|ref|XP_001898060.1| KH domain containing protein [Brugia malayi]
gi|158594455|gb|EDP33039.1| KH domain containing protein [Brugia malayi]
Length = 451
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 110/258 (42%), Gaps = 43/258 (16%)
Query: 405 RLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASEN-EEVVLINGEFEAV 463
++LV + G ++G+GGS I E+R+ +GA +++ +CA ++ E +VL+NGE E +
Sbjct: 222 KVLVHESHAGAVIGRGGSRIKELREKTGAQLKVF-----SRCAPQSTERIVLLNGEVEKI 276
Query: 464 QEALFQITTRLRHHFFRDAFPSINRPLNPTFL--DQVSPFPSFI-GRRELSPPGMYSNFG 520
+ + I L+ + RP +P + D +S + ++ R +S G +FG
Sbjct: 277 IDCINIIIDVLKEIPIKGPV----RPYDPMYYDPDIISDYGGYVPDRNFISRVGRGRDFG 332
Query: 521 PSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGF 580
S P + DD GM M P
Sbjct: 333 FS--------SGIIPSRYPGRDDRYG--------GMRDMMGRYSP--------------I 362
Query: 581 PDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISG 640
P V +P L I G+ G+ + ++R+ S A+I + + + +I ISG
Sbjct: 363 PAMQTTQVETTDVTIPDELGGAIIGKGGSRINRVREESGAQIEVEPHRDNGGDRIITISG 422
Query: 641 TPEQTHAAQSLIQAFVMS 658
T EQ AAQ L+Q V +
Sbjct: 423 TREQIQAAQYLLQQCVRT 440
>gi|291415485|ref|XP_002723980.1| PREDICTED: neuro-oncological ventral antigen 2 [Oryctolagus
cuniculus]
Length = 492
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 90/177 (50%), Gaps = 28/177 (15%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA---VSGTEDRLIVISGPAHPDDR 375
++L G +IGKGG I L++ETG IK+ ++ GT +R+ ++ G A +
Sbjct: 35 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 94
Query: 376 ISA---------PQDA-------VLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGK 419
+ + PQ +L+ QT + PD +Q +L+V ++ G ++GK
Sbjct: 95 VHSFIAEKVREIPQAMTKPEVVNILQPQTTMN---PDRAKQA---KLIVPNSTAGLIIGK 148
Query: 420 GGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRH 476
GG+ + + + SGA++++ Q P+ + E VV ++GE E V +A+ I +++
Sbjct: 149 GGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQE 202
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 591 VPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPK---PGATETVIIISGTPEQTHA 647
V + VP +LV I G+ G L + ++++ A+I I+ PG + I+G+P T A
Sbjct: 409 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQA 468
Query: 648 AQSLIQAFVMSE 659
AQ LI V E
Sbjct: 469 AQYLISQRVSYE 480
Score = 39.3 bits (90), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 403 MTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQ-IPKCASENEEVVLINGEFE 461
+ + V N +G +LGKGG + E ++L+GA I+I K + +P + N V I G
Sbjct: 408 LVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLP--GTRNRRVT-ITGSPA 464
Query: 462 AVQEALFQITTRLRHH 477
A Q A + I+ R+ +
Sbjct: 465 ATQAAQYLISQRVSYE 480
>gi|67536752|ref|XP_662150.1| hypothetical protein AN4546.2 [Aspergillus nidulans FGSC A4]
gi|40741699|gb|EAA60889.1| hypothetical protein AN4546.2 [Aspergillus nidulans FGSC A4]
gi|259482624|tpe|CBF77283.1| TPA: KH domain RNA-binding protein (AFU_orthologue; AFUA_2G02780)
[Aspergillus nidulans FGSC A4]
Length = 542
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 94/219 (42%), Gaps = 35/219 (15%)
Query: 273 VSSQGAPYATGHRDVADIHLP------MPPSIPKFHESGVLDRPKPSPE----ILTFRLL 322
VSS P + D DIH M ++ E + PK E +LT R +
Sbjct: 173 VSSSTTPLKLENMDTTDIHETPIADETMTDAVNVGDEGDLEVAPKTEEEYAQSMLTLRAI 232
Query: 323 CHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDA 382
+ G +IGK G + L+ ETG V + V G DR++ ++G
Sbjct: 233 VSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTGAL----------SG 282
Query: 383 VLRVQTRIARAIPDNREQTVM-----------TRLLVASNQIGCLLGKGGSIIAEMRKLS 431
R +A+ + + Q M RLL++ NQ+G ++G+ G I ++ S
Sbjct: 283 TARAYALVAKGLLEGAPQMGMGGIVSNNGTHPIRLLISHNQMGTIIGRQGLKIKHIQDAS 342
Query: 432 GAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
G + + K+ +P+ E +V + G E +++A+++I
Sbjct: 343 GVRM-VAQKEMLPQST---ERIVEVQGTPEGIEKAIWEI 377
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 104/242 (42%), Gaps = 21/242 (8%)
Query: 154 SKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQID 213
S +A LV + ++E P+ + + + + RLL+ Q+G ++G+ G IK I
Sbjct: 281 SGTARAYALVAKGLLEGAPQMGMGGIVSNNGTHPI-RLLISHNQMGTIIGRQGLKIKHIQ 339
Query: 214 KLPTCAL---------ASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNP--- 261
+ +++ +V++ G + + KA+ I L+D+ R +I NP
Sbjct: 340 DASGVRMVAQKEMLPQSTERIVEVQGTPEGIEKAIWEIGKCLIDDWQRGTGTILYNPAVR 399
Query: 262 ----TGPSHPLPDHSVSSQGAPYA-TGH-RDVADIHLPMPP-SIPKFHESGVLDRPKPSP 314
+G +S S PY TG+ D +D S P G +
Sbjct: 400 SSVGSGSIQHNGGNSDSYNSRPYNRTGNGADFSDQSGGYGRRSNPDTSNRGYPLVTEDGE 459
Query: 315 EILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA-VSGTEDRLIVISGPAHPD 373
EI T + + VG +IG+GG I +++ +G I + +A T +R+ I G A +
Sbjct: 460 EIQTQNISIPADMVGCIIGRGGTKITEIRRSSGARISIAKAPHDETGERMFTIMGSAQAN 519
Query: 374 DR 375
++
Sbjct: 520 EK 521
>gi|145238284|ref|XP_001391789.1| RNA-binding protein rnc1 [Aspergillus niger CBS 513.88]
gi|134076273|emb|CAL00757.1| unnamed protein product [Aspergillus niger]
gi|350635790|gb|EHA24151.1| hypothetical protein ASPNIDRAFT_209528 [Aspergillus niger ATCC
1015]
Length = 360
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 83/168 (49%), Gaps = 9/168 (5%)
Query: 316 ILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDR 375
+LT R + + G +IGK G + L+ ETG V + V G DR++ ++GP + R
Sbjct: 42 MLTLRAIVSSKEAGIIIGKSGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTGPLNGTAR 101
Query: 376 ISAPQDAVLRV---QTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSG 432
A L Q + + +N V RLL++ NQ+G ++G+ G I ++ SG
Sbjct: 102 AYALVAKGLLEGAPQMGMGGIVSNNGTHPV--RLLISHNQMGTIIGRQGLKIKHIQDASG 159
Query: 433 AYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFR 480
+ + K+ +P+ E +V + G E +++A+++I L + R
Sbjct: 160 VRM-VAQKEMLPQST---ERIVEVQGTPEGIEKAVWEIGKCLIDDWQR 203
Score = 45.8 bits (107), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 145/352 (41%), Gaps = 64/352 (18%)
Query: 168 VEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI-DKLPTCALAS---- 222
+E P+TE E S LR +V S + G ++GK G + + D+ A S
Sbjct: 28 IETTPKTE----EEYAQSMLTLRAIVSSKEAGIIIGKSGKNVADLRDETGVKAGVSKVVP 83
Query: 223 ---DEVVQITGEVDTVRKALKLISHQLLDNSPRDHES--IPGNPTGPSHPLPDHS----- 272
D V+ +TG ++ +A L++ LL+ +P+ + N T P L H+
Sbjct: 84 GVHDRVLTVTGPLNGTARAYALVAKGLLEGAPQMGMGGIVSNNGTHPVRLLISHNQMGTI 143
Query: 273 VSSQGAPY-----ATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDER 327
+ QG A+G R VA + +P S + E + +PE + E+
Sbjct: 144 IGRQGLKIKHIQDASGVRMVAQKEM-LPQSTERIVE------VQGTPEGI--------EK 188
Query: 328 VGGVIGKGGAIIRSLKQETGCDIK--VMEAVSGTEDRLIVISGP------AHPDDRISAP 379
IGK +I ++ TG + + A GT ++ + P +R
Sbjct: 189 AVWEIGK--CLIDDWQRGTGTILYNPAVRASVGTTTSTSTMNQSVGNGYNSRPYNRTGNG 246
Query: 380 QDAVLRVQTRIARAIPD--NR---------EQTVMTRLLVASNQIGCLLGKGGSIIAEMR 428
D + R+ PD NR E+ + + ++ +GC++G+GGS I E+R
Sbjct: 247 ADFSDQSGGYGRRSNPDTSNRGYPLVTEDGEEIQTQNISIPADMVGCIIGRGGSKITEIR 306
Query: 429 KLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFR 480
+ SGA I I + P + E + I G +A ++AL+ + L R
Sbjct: 307 RSSGARISIA---KAPHDET-GERMFTIMGSAQANEKALYLLYENLEAEKTR 354
>gi|357615456|gb|EHJ69667.1| putative igf2 mRNA binding protein [Danaus plexippus]
Length = 599
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 155/329 (47%), Gaps = 40/329 (12%)
Query: 175 EVADQE--NTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI----DKLPTCALASD----- 223
EV QE NT + L++L + +G ++GKGG IK+I D T + +D
Sbjct: 205 EVMQQEANNTNKGEICLKILAHNNLIGRIIGKGGNTIKRIMQETDTKITVSSINDINSFN 264
Query: 224 --EVVQITGEVDTVRKALKLISHQLLDNSPRDHESI-PGNPTGPS-HPLPDHSVSSQGAP 279
++ + G ++ + KA IS +L + D + + P + P HP+ ++ S G
Sbjct: 265 LERIITVKGTIENMAKAESQISAKLRQSYENDLQVLAPQSIMFPGLHPM---AMMSTGRG 321
Query: 280 YATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAII 339
+ G + P + + G D + T L + VG +IG G+ I
Sbjct: 322 FC-GAPPPFPPPIYAPLAGQGGAQQGAGDSQE------TTYLYIPNNAVGAIIGTKGSHI 374
Query: 340 RSLKQETGCDIK--------VME-AVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRI 390
R++ + + +K V+E +V+ ++R + I G P+ + A +++
Sbjct: 375 RNIIRFSNASVKIAPLEQDKVIEGSVAAQQERKVTIVGS--PEAQWKAQYLIFEKMREEG 432
Query: 391 ARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCA-SE 449
+ D+ TV ++VAS+Q+G ++GKGG + E+++++G+ I++ + Q P A ++
Sbjct: 433 FMSGSDDVRLTVA--IVVASSQVGRIIGKGGQNVRELQRVTGSLIKLPEQPQPPTAAGND 490
Query: 450 NEEVVLINGEFEAVQEALFQITTRLRHHF 478
+E V I G F +VQE + + L +F
Sbjct: 491 HETTVHIVGHFYSVQE-YYDLNIELFGYF 518
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 81/164 (49%), Gaps = 9/164 (5%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRIS 377
RLL + VG +IG+ G+ IR + Q++ + V + G+ ++ I I G +PD+
Sbjct: 141 LRLLVQSDMVGAIIGRQGSTIRLITQQSRARVDVHRKDNVGSLEKAITIYG--NPDN--- 195
Query: 378 APQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRI 437
+A R+ + + + + + ++L +N IG ++GKGG+ I + + + I +
Sbjct: 196 -CTNACKRILEVMQQEANNTNKGEICLKILAHNNLIGRIIGKGGNTIKRIMQETDTKITV 254
Query: 438 LGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRD 481
+ I + E ++ + G E + +A QI+ +LR + D
Sbjct: 255 SSINDIN--SFNLERIITVKGTIENMAKAESQISAKLRQSYEND 296
>gi|296477630|tpg|DAA19745.1| TPA: neuro-oncological ventral antigen 2-like [Bos taurus]
Length = 640
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 90/177 (50%), Gaps = 28/177 (15%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA---VSGTEDRLIVISGPAHPDDR 375
++L G +IGKGG I L++ETG IK+ ++ GT +R+ ++ G A +
Sbjct: 183 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 242
Query: 376 ISA---------PQDA-------VLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGK 419
+ + PQ +L+ QT + PD +Q +L+V ++ G ++GK
Sbjct: 243 VHSFIAEKVREIPQAMTKPEVVNILQPQTTMN---PDRAKQA---KLIVPNSTAGLIIGK 296
Query: 420 GGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRH 476
GG+ + + + SGA++++ Q P+ + E VV ++GE E V +A+ I +++
Sbjct: 297 GGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQE 350
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 591 VPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPK---PGATETVIIISGTPEQTHA 647
V + VP +LV I G+ G L + ++++ A+I I+ PG + I+G+P T A
Sbjct: 557 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQA 616
Query: 648 AQSLIQAFVMSE 659
AQ LI V E
Sbjct: 617 AQYLISQRVTYE 628
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 10/92 (10%)
Query: 392 RAIPD------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRI-LGKDQIP 444
+A+PD N E ++L+ S G ++GKGG I +++K +GA I++ KD P
Sbjct: 165 QAVPDGYPDVANEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYP 224
Query: 445 KCASENEEVVLINGEFEAVQEALFQITTRLRH 476
E V L+ G EA+ I ++R
Sbjct: 225 ---GTTERVCLVQGTAEALNAVHSFIAEKVRE 253
Score = 39.3 bits (90), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 403 MTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQ-IPKCASENEEVVLINGEFE 461
+ + V N +G +LGKGG + E ++L+GA I+I K + +P + N V I G
Sbjct: 556 LVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLP--GTRNRRVT-ITGSPA 612
Query: 462 AVQEALFQITTRLRHH 477
A Q A + I+ R+ +
Sbjct: 613 ATQAAQYLISQRVTYE 628
Score = 38.9 bits (89), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 589 RRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGAT--ETVIIISGTPEQTH 646
++ ++VP S +I G+ GA +K + + S A + ++ G E V+ +SG PEQ H
Sbjct: 279 KQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVH 338
Query: 647 AAQSLI 652
A S I
Sbjct: 339 KAVSAI 344
>gi|297605767|ref|NP_001057572.2| Os06g0342500 [Oryza sativa Japonica Group]
gi|255677019|dbj|BAF19486.2| Os06g0342500 [Oryza sativa Japonica Group]
Length = 96
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 44/66 (66%)
Query: 593 VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLI 652
VV+P+S V + G+ L QI ++S A +T+ D +P A E V+ ISGTPEQ AQSL+
Sbjct: 23 VVIPKSAVASLTMRAGSKLAQISEMSGATVTLADERPDAIEKVVRISGTPEQADKAQSLL 82
Query: 653 QAFVMS 658
Q F++S
Sbjct: 83 QGFILS 88
>gi|390177066|ref|XP_003736270.1| GA30025, isoform D [Drosophila pseudoobscura pseudoobscura]
gi|388858894|gb|EIM52343.1| GA30025, isoform D [Drosophila pseudoobscura pseudoobscura]
Length = 576
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 90/187 (48%), Gaps = 23/187 (12%)
Query: 329 GGVIGKGGAIIRSLKQETGCDIKVMEA---VSGTEDRLIVISGPAHPD--------DRIS 377
G +IGKGG I SL+++TG +K+ ++ GT +R+ +I+G D+I
Sbjct: 84 GAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMVVLDFIMDKIR 143
Query: 378 APQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRI 437
D ++ I +E+ ++LV ++ G ++GKGG+ I ++++ SG+Y++I
Sbjct: 144 EKPDLTTKI---IDAESKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEDSGSYVQI 200
Query: 438 LGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQ 497
Q PK S E + I G+ E + A I +++ P LN ++ D
Sbjct: 201 ---SQKPKDVSLQERCITIIGDKENNKNACKMILSKIVED------PQSGTCLNVSYADV 251
Query: 498 VSPFPSF 504
P +F
Sbjct: 252 SGPVANF 258
>gi|358379880|gb|EHK17559.1| hypothetical protein TRIVIDRAFT_231881 [Trichoderma virens Gv29-8]
Length = 477
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 141/377 (37%), Gaps = 88/377 (23%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
+ R + +IGKGG + ++++ + V + G +R++ +SG
Sbjct: 116 IHIRAVISSPEAATIIGKGGENVSNIRKMSNAKCTVSDYQKGAVERILTVSGIV------ 169
Query: 377 SAPQDAVLRVQTRIARAI---PDNREQTVMT-----RLLVASNQIGCLLGKGGSIIAEMR 428
DAV + I R + P N T + RLL+ IG ++GKGGS I E++
Sbjct: 170 ----DAVAKAFGLIIRTLNNEPLNEASTASSKTYPLRLLIPHILIGSIIGKGGSRIREIQ 225
Query: 429 KLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINR 488
+ SGA R+ D +SE VV+ G +AV A + + + L
Sbjct: 226 EASGA--RLNASDSCLPMSSERSLVVM--GVADAVHIATYYVGSTLLEQ----------- 270
Query: 489 PLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFM 548
LN F P S R +P G V P P S H +
Sbjct: 271 -LNERF---GGPAASAYATRSGAPVGSIPG------GMQVVPYSPQPASGHYGRAENYGR 320
Query: 549 HHIHRP--------------GMP-----------------------PHM-PDMKP-WGPQ 569
H RP G P PH+ P M P GPQ
Sbjct: 321 HQERRPHHMPPAPYPQPYPHGAPHGAPAIPMQYGAGQPAAAYGAAAPHVQPHMAPHTGPQ 380
Query: 570 GLMEVGGPMGFPDFVGPPHR---RVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITD 626
G P G P G P + +P +V I G+ G + +IRQ+S + I I +
Sbjct: 381 ---PHGAPQGQPMHAGMPGTGPITQQIYIPNDMVGAIIGKGGQKINEIRQMSGSVIKINE 437
Query: 627 PKPGATETVIIISGTPE 643
P+ + E ++ I+GT E
Sbjct: 438 PQDNSNERLVTITGTEE 454
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 44/73 (60%), Gaps = 5/73 (6%)
Query: 402 VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFE 461
+ ++ + ++ +G ++GKGG I E+R++SG+ I+I P+ S NE +V I G E
Sbjct: 400 ITQQIYIPNDMVGAIIGKGGQKINEIRQMSGSVIKI----NEPQDNS-NERLVTITGTEE 454
Query: 462 AVQEALFQITTRL 474
+ AL+ + +RL
Sbjct: 455 CNRMALYMLYSRL 467
Score = 38.9 bits (89), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%)
Query: 44 GGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASD 99
G I ++ P + +IGK G+ +++I Q +G I++ E S+ERLV I ++
Sbjct: 398 GPITQQIYIPNDMVGAIIGKGGQKINEIRQMSGSVIKINEPQDNSNERLVTITGTE 453
>gi|345785612|ref|XP_855043.2| PREDICTED: RNA-binding protein Nova-2 [Canis lupus familiaris]
Length = 597
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 90/177 (50%), Gaps = 28/177 (15%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA---VSGTEDRLIVISGPAHPDDR 375
++L G +IGKGG I L++ETG IK+ ++ GT +R+ ++ G A +
Sbjct: 140 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 199
Query: 376 ISA---------PQDA-------VLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGK 419
+ + PQ +L+ QT + PD +Q +L+V ++ G ++GK
Sbjct: 200 VHSFIAEKVREIPQAMTKPEVVNILQPQTTMN---PDRAKQA---KLIVPNSTAGLIIGK 253
Query: 420 GGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRH 476
GG+ + + + SGA++++ Q P+ + E VV ++GE E V +A+ I +++
Sbjct: 254 GGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQE 307
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 591 VPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPK---PGATETVIIISGTPEQTHA 647
V + VP +LV I G+ G L + ++++ A+I I+ PG + I+G+P T A
Sbjct: 514 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQA 573
Query: 648 AQSLIQAFVMSE 659
AQ LI V E
Sbjct: 574 AQYLISQRVTYE 585
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 403 MTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEA 462
+ + V N +G +LGKGG + E ++L+GA I+I K + V I G A
Sbjct: 513 LVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEF--LPGTRNRRVTITGSPAA 570
Query: 463 VQEALFQITTRLRHH 477
Q A + I+ R+ +
Sbjct: 571 TQAAQYLISQRVTYE 585
>gi|194889982|ref|XP_001977205.1| GG18899 [Drosophila erecta]
gi|190648854|gb|EDV46132.1| GG18899 [Drosophila erecta]
Length = 568
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 143/321 (44%), Gaps = 39/321 (12%)
Query: 175 EVADQE--NTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI----DKLPTCALASD----- 223
EV QE +T + L++L + +G ++GK G IK+I D T + +D
Sbjct: 145 EVMQQEALSTNKGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDINSFN 204
Query: 224 --EVVQITGEVDTVRKALKLISHQLLDNSPRDHESI-PGNPTGPS-HPLPDHSVSSQGAP 279
++ + G ++ + +A IS +L + D +++ P + P HP+ S G
Sbjct: 205 LERIITVKGLIENMSRAENQISTKLRQSYENDLQAMAPQSLMFPGLHPMAMMSTPGNGMV 264
Query: 280 YATGHRDVADIHLPMP-PSIPKFHES----GVLDRPKPSPEILTFRLLCHDERVGGVIGK 334
+ T MP PS F S V+ P+ T L + VG +IG
Sbjct: 265 FNTS----------MPFPSCQSFAMSKTPASVVPPVFPNDLQETTYLYIPNNAVGAIIGT 314
Query: 335 GGAIIRSLKQETGCDIKVM-----EAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTR 389
G+ IRS+ + + +K+ + + +R + I G P+ + A +++
Sbjct: 315 KGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGT--PEGQWKAQFMIFEKMREE 372
Query: 390 IARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASE 449
D+ TV LLVAS+Q+G ++GKGG + E+++++G+ I++ P +
Sbjct: 373 GFMCGTDDVRLTV--ELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLPEHALAPPSGGD 430
Query: 450 NEEVVLINGEFEAVQEALFQI 470
E V I G F +VQ A +I
Sbjct: 431 EETPVHIIGPFYSVQSAQRRI 451
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 137/342 (40%), Gaps = 65/342 (19%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRIS 377
R+L E VG +IG+ G+ IR++ Q++ + V + G+ ++ I I G +P++ +
Sbjct: 81 LRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENVGSLEKSITIYG--NPENCTN 138
Query: 378 APQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRI 437
A + +L V + A+ N+ + + ++L +N IG ++GK G+ I + + + I +
Sbjct: 139 ACKR-ILEVMQQ--EALSTNKGEICL-KILAHNNLIGRIIGKSGNTIKRIMQDTDTKITV 194
Query: 438 LGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQ 497
+ I + E ++ + G E + A QI+T+LR + D + + P L
Sbjct: 195 SSINDI--NSFNLERIITVKGLIENMSRAENQISTKLRQSYENDL-----QAMAPQSLM- 246
Query: 498 VSPFPSFIGRRELSPP--GMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPG 555
FP +S P GM N F + P S P
Sbjct: 247 ---FPGLHPMAMMSTPGNGMVFNTSMPFPSCQSFAMSKTPASVVP--------------- 288
Query: 556 MPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIR 615
P P L E + +P + V I G G+ ++ I
Sbjct: 289 ---------PVFPNDLQET----------------TYLYIPNNAVGAIIGTKGSHIRSIM 323
Query: 616 QISDAKITIT-----DPKPGATETVIIISGTPEQTHAAQSLI 652
+ S+A + I P TE + I GTPE AQ +I
Sbjct: 324 RFSNASLKIAPLDADKPLDQQTERKVTIVGTPEGQWKAQFMI 365
>gi|170036665|ref|XP_001846183.1| igf2 mRNA binding protein [Culex quinquefasciatus]
gi|167879496|gb|EDS42879.1| igf2 mRNA binding protein [Culex quinquefasciatus]
Length = 520
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 146/313 (46%), Gaps = 37/313 (11%)
Query: 175 EVADQE--NTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI----DKLPTCALASD----- 223
EV QE NT + L++L + +G ++GK G IK+I D T + +D
Sbjct: 192 EVMQQEANNTNKGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDINSFN 251
Query: 224 --EVVQITGEVDTVRKALKLISHQLLDNSPRDHESI-PGNPTGPS-HPLPDHSVSSQGAP 279
++ + G +D + + IS +L + D +++ P + P HP+ S + G
Sbjct: 252 LERIITVKGSIDNMSRGESQISAKLRQSYENDLQALAPQSIMFPGLHPMAMMSTAGNGMG 311
Query: 280 YA--TGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEIL-TFRLLCHDERVGGVIGKGG 336
+A +G + + PP+ P GV P S ++ T L + VG +IG G
Sbjct: 312 FAGRSGMYPGSSYPMYQPPTAP-----GV---PPGSSDVQETTYLYIPNNAVGAIIGTKG 363
Query: 337 AIIRSLKQETGCDIKV--MEA---VSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIA 391
+ IR++ + +G +K+ +EA + +R + I G P+ + A +++
Sbjct: 364 SHIRNIIRFSGASVKIAPLEADKPLEQQTERKVTIVGT--PEAQWKAQYLIFEKMREEGF 421
Query: 392 RAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENE 451
+ D+ TV +LV S Q+G ++GKGG + E+++++G+ I++ + + E
Sbjct: 422 VSGTDDVRLTV--EILVPSAQVGRIIGKGGQNVRELQRVTGSIIKL--PEHTAATPVDEE 477
Query: 452 EVVLINGEFEAVQ 464
V I G F +VQ
Sbjct: 478 TTVHIIGPFFSVQ 490
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 135/340 (39%), Gaps = 61/340 (17%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRIS 377
RLL E VG +IG+ G+ IR + Q + + V + G+ ++ I I G +P++ S
Sbjct: 128 LRLLVASEMVGAIIGRQGSTIRQITQNSRARVDVHRKDNVGSLEKAITIYG--NPENCTS 185
Query: 378 APQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRI 437
A + R+ + + + + + ++L +N IG ++GK G+ I + + + I +
Sbjct: 186 ACK----RILEVMQQEANNTNKGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITV 241
Query: 438 LGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQ 497
+ I + E ++ + G + + QI+ +LR + D + L P Q
Sbjct: 242 SSINDIN--SFNLERIITVKGSIDNMSRGESQISAKLRQSYENDL-----QALAP----Q 290
Query: 498 VSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMP 557
FP L P M S G F G P S+ + +A PG+P
Sbjct: 291 SIMFPG------LHPMAMMSTAGNGM-GFAGRSGMYPGSSYPMYQPPTA-------PGVP 336
Query: 558 PHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQI 617
P D++ + +P + V I G G+ ++ I +
Sbjct: 337 PGSSDVQ------------------------ETTYLYIPNNAVGAIIGTKGSHIRNIIRF 372
Query: 618 SDAKITIT-----DPKPGATETVIIISGTPEQTHAAQSLI 652
S A + I P TE + I GTPE AQ LI
Sbjct: 373 SGASVKIAPLEADKPLEQQTERKVTIVGTPEAQWKAQYLI 412
>gi|195439130|ref|XP_002067484.1| GK16164 [Drosophila willistoni]
gi|194163569|gb|EDW78470.1| GK16164 [Drosophila willistoni]
Length = 587
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 143/321 (44%), Gaps = 39/321 (12%)
Query: 175 EVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIKQI----DKLPTCALASD----- 223
EV QE ++K L++L + +G ++GK G IK+I D T + +D
Sbjct: 151 EVMQQEANSTNKGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDINSFN 210
Query: 224 --EVVQITGEVDTVRKALKLISHQLLDNSPRDHESI-PGNPTGPS-HPLPDHSVSSQGAP 279
++ + G ++ + +A IS +L + D +++ P + P HP+ S G
Sbjct: 211 LERIITVKGLIENMSRAENQISTKLRQSYENDLQAMAPQSLMFPGLHPMAMMSTPGNGMV 270
Query: 280 YATGHRDVADIHLPMP-PSIPKFHES----GVLDRPKPSPEILTFRLLCHDERVGGVIGK 334
+ T MP PS F S V+ P+ T L + VG +IG
Sbjct: 271 FNTS----------MPFPSCQGFAMSKTPANVVPPVFPNDMQETTYLYIPNNAVGAIIGT 320
Query: 335 GGAIIRSLKQETGCDIKVM-----EAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTR 389
G+ IRS+ + + +K+ + + +R + I G P+ + A +++
Sbjct: 321 KGSHIRSIMRFSNASLKIAPIDADKPLDQQTERKVTIVG--TPEGQWKAQYMIFEKMREE 378
Query: 390 IARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASE 449
D+ T+ LLVAS+Q+G ++GKGG + E+++++G+ I++ P +
Sbjct: 379 GFMCGTDDVRLTI--ELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLPEHALAPPSGGD 436
Query: 450 NEEVVLINGEFEAVQEALFQI 470
E V I G F +VQ A +I
Sbjct: 437 EETPVHIIGPFYSVQSAQRRI 457
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 87/205 (42%), Gaps = 26/205 (12%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGC--DIKVMEAVSGTEDRLIVISGPAHPDDRI 376
R+L E VG +IG+ G+ IR++ Q++ D+ E V E + + P +
Sbjct: 87 LRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENVGSLEKSITIYGNPENCT--- 143
Query: 377 SAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIR 436
+A R+ + + + + ++L +N IG ++GK G+ I + + + I
Sbjct: 144 ----NACKRILEVMQQEANSTNKGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKIT 199
Query: 437 ILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRD---------AFPSI- 486
+ + I + E ++ + G E + A QI+T+LR + D FP +
Sbjct: 200 VSSINDI--NSFNLERIITVKGLIENMSRAENQISTKLRQSYENDLQAMAPQSLMFPGLH 257
Query: 487 -----NRPLNPTFLDQVSPFPSFIG 506
+ P N + PFPS G
Sbjct: 258 PMAMMSTPGNGMVFNTSMPFPSCQG 282
>gi|19075184|ref|NP_587684.1| RNA-binding protein [Schizosaccharomyces pombe 972h-]
gi|74626925|sp|O74919.1|RNC1_SCHPO RecName: Full=RNA-binding protein rnc1; AltName: Full=RNA-binding
protein that suppresses calcineurin deletion 1
gi|3702642|emb|CAA21234.1| RNA-binding protein that suppresses calcineurin deletion Rnc1
[Schizosaccharomyces pombe]
Length = 398
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 132/344 (38%), Gaps = 60/344 (17%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT R L G +IGK G + L+ T V +AV DR++ ISGP R
Sbjct: 94 LTLRALLSTREAGIIIGKAGKNVAELRSTTNVKAGVTKAVPNVHDRVLTISGPLENVVRA 153
Query: 377 SAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIR 436
+ + P + RLL+A + +G ++G+ G I ++ +
Sbjct: 154 YRFIIDIFAKNSTNPDGTPSDANTPRKLRLLIAHSLMGSIIGRNGLRIKLIQDKCSCRM- 212
Query: 437 ILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLD 496
I KD +P+ E V I+G + + A+++I L + R A P+ + L
Sbjct: 213 IASKDMLPQ---STERTVEIHGTVDNLHAAIWEIGKCLIDDWERGAGTVFYNPV--SRLT 267
Query: 497 QVSPFPSFIGR---RELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHR 553
Q P PS +++SPP PS +A+
Sbjct: 268 Q--PLPSLASTASPQQVSPPA-----APSTTSGEAI------------------------ 296
Query: 554 PGMPPHMPDMKPWGPQGLMEVGGPMGFPD----FVGPPHRRVPVVVPRSLVPIIQGEDGA 609
P+ + G + FP F+ P + +P +V I G G+
Sbjct: 297 --------------PENFVSYGAQV-FPATQMPFLQQPKVTQNISIPADMVGCIIGRGGS 341
Query: 610 CLKQIRQISDAKITIT-DPKPGATETVIIISGTPEQTHAAQSLI 652
+ +IR+ S +KI+I +P E + I+GT E+ A L+
Sbjct: 342 KISEIRRTSGSKISIAKEPHDETGERMFTITGTHEENEKALFLL 385
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 88/198 (44%), Gaps = 23/198 (11%)
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQIDKLPTCAL---------ASDEVVQITGEVDTVRKAL 239
LRLL+ + +G ++G+ G IK I +C + +++ V+I G VD + A+
Sbjct: 181 LRLLIAHSLMGSIIGRNGLRIKLIQDKCSCRMIASKDMLPQSTERTVEIHGTVDNLHAAI 240
Query: 240 KLISHQLLDNSPRDHESIPGNPTGP-SHPLPD-------HSVSSQGAPYATGHRDVADIH 291
I L+D+ R ++ NP + PLP VS AP T + +
Sbjct: 241 WEIGKCLIDDWERGAGTVFYNPVSRLTQPLPSLASTASPQQVSPPAAPSTTSGEAIPENF 300
Query: 292 LPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIK 351
+ + + L +PK +T + + VG +IG+GG+ I +++ +G I
Sbjct: 301 VSYGAQVFPATQMPFLQQPK-----VTQNISIPADMVGCIIGRGGSKISEIRRTSGSKIS 355
Query: 352 VM-EAVSGTEDRLIVISG 368
+ E T +R+ I+G
Sbjct: 356 IAKEPHDETGERMFTITG 373
Score = 42.7 bits (99), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 54/108 (50%), Gaps = 10/108 (9%)
Query: 367 SGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAE 426
SG A P++ +S Q A +P ++ V + + ++ +GC++G+GGS I+E
Sbjct: 292 SGEAIPENFVS------YGAQVFPATQMPFLQQPKVTQNISIPADMVGCIIGRGGSKISE 345
Query: 427 MRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRL 474
+R+ SG+ I I + E + I G E ++ALF + +L
Sbjct: 346 IRRTSGSKISIAKEPH----DETGERMFTITGTHEENEKALFLLYQQL 389
>gi|291400301|ref|XP_002716510.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 2-like
isoform 2 [Oryctolagus cuniculus]
Length = 556
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 110/484 (22%), Positives = 188/484 (38%), Gaps = 135/484 (27%)
Query: 14 DDNHTEPNGKEKSQKLAGDYSENQPSKSFPGG--------IMFRVLCPVSKIDGVIGKDG 65
D+ + P+ +++Q+ GD+S + + PGG R+L P + +IGK+G
Sbjct: 157 DEEVSSPSPPQRAQR--GDHSSREQGHA-PGGSSQARQIDFPLRILVPTQFVGAIIGKEG 213
Query: 66 EMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASV 125
+ I++ T + I R EN+G E V
Sbjct: 214 LTIKNITKQTQSRV-------------------------------DIHRKENSGAAEKPV 242
Query: 126 ADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSS 185
+ EG+ +A ++ E M + ET++A++
Sbjct: 243 TIHA-------TPEGT---------------SEACRMILEIMQKEADETKLAEE------ 274
Query: 186 KFVLRLLVLSTQVGCLLGKGGCVIKQID-----KLPTCALAS------DEVVQITGEVDT 234
L++L + VG L+GK G +K+I+ K+ +L + + + G V+
Sbjct: 275 -IPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEA 333
Query: 235 VRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPM 294
A I +L + D ++ + S P H Q P+
Sbjct: 334 CASAEAEIMKKLREAFENDMLAVNTHSGYFSSLYPHH----QFGPF-------------- 375
Query: 295 PPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVME 354
P H P EI+ L + VG +IGK GA I+ L + G IK+
Sbjct: 376 ----PHHHSY-------PEQEIVN--LFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAP 422
Query: 355 AVS-GTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPD------NREQTVMTRLL 407
A +R+++I+GP +A + Q RI + + E + +
Sbjct: 423 AEGPDVSERMVIITGPP----------EAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIR 472
Query: 408 VASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVL-INGEFEAVQEA 466
V S+ G ++GKGG + E++ L+ A + I+ +DQ P ENEEV++ I G F A Q A
Sbjct: 473 VPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVIVRIIGHFFASQTA 528
Query: 467 LFQI 470
+I
Sbjct: 529 QRKI 532
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 72/342 (21%), Positives = 126/342 (36%), Gaps = 96/342 (28%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV-MEAVSGTEDRLIVISGPAHPDDRIS 377
R+L + VG +IGK G I+++ ++T + + + SG ++ + I A P+
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIH--ATPEGTSE 253
Query: 378 APQDAVLRV------QTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLS 431
A + +L + +T++A IP ++L + +G L+GK G + ++ +
Sbjct: 254 ACR-MILEIMQKEADETKLAEEIP--------LKILAHNGLVGRLIGKEGRNLKKIEHET 304
Query: 432 GAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLN 491
G I I + E + + G EA A +I +LR F D ++N
Sbjct: 305 GTKITISSLQDL--SIYNPERTITVKGTVEACASAEAEIMKKLREAFENDML-AVN---- 357
Query: 492 PTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHI 551
+ G +S S +PH F HH
Sbjct: 358 -------------------THSGYFS-------------------SLYPHHQFGPFPHH- 378
Query: 552 HRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACL 611
+P+ V + +P V I G+ GA +
Sbjct: 379 --------------------------HSYPE-----QEIVNLFIPTQAVGAIIGKKGAHI 407
Query: 612 KQIRQISDAKITITDPK-PGATETVIIISGTPEQTHAAQSLI 652
KQ+ + + A I I + P +E ++II+G PE AQ I
Sbjct: 408 KQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI 449
>gi|329663502|ref|NP_001193038.1| RNA-binding protein Nova-2 [Bos taurus]
Length = 492
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 90/177 (50%), Gaps = 28/177 (15%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA---VSGTEDRLIVISGPAHPDDR 375
++L G +IGKGG I L++ETG IK+ ++ GT +R+ ++ G A +
Sbjct: 35 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 94
Query: 376 ISA---------PQDA-------VLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGK 419
+ + PQ +L+ QT + PD +Q +L+V ++ G ++GK
Sbjct: 95 VHSFIAEKVREIPQAMTKPEVVNILQPQTTMN---PDRAKQA---KLIVPNSTAGLIIGK 148
Query: 420 GGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRH 476
GG+ + + + SGA++++ Q P+ + E VV ++GE E V +A+ I +++
Sbjct: 149 GGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQE 202
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 591 VPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPK---PGATETVIIISGTPEQTHA 647
V + VP +LV I G+ G L + ++++ A+I I+ PG + I+G+P T A
Sbjct: 409 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQA 468
Query: 648 AQSLIQAFVMSE 659
AQ LI V E
Sbjct: 469 AQYLISQRVTYE 480
Score = 39.3 bits (90), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 403 MTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQ-IPKCASENEEVVLINGEFE 461
+ + V N +G +LGKGG + E ++L+GA I+I K + +P + N V I G
Sbjct: 408 LVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLP--GTRNRRVT-ITGSPA 464
Query: 462 AVQEALFQITTRLRHH 477
A Q A + I+ R+ +
Sbjct: 465 ATQAAQYLISQRVTYE 480
>gi|5902724|ref|NP_002507.1| RNA-binding protein Nova-2 [Homo sapiens]
gi|33516944|sp|Q9UNW9.1|NOVA2_HUMAN RecName: Full=RNA-binding protein Nova-2; AltName: Full=Astrocytic
NOVA1-like RNA-binding protein; AltName:
Full=Neuro-oncological ventral antigen 2
gi|3851553|gb|AAC72355.1| RNA-binding protein Nova-2 [Homo sapiens]
gi|195934809|gb|AAI68367.1| Neuro-oncological ventral antigen 2 [synthetic construct]
Length = 492
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 90/177 (50%), Gaps = 28/177 (15%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA---VSGTEDRLIVISGPAHPDDR 375
++L G +IGKGG I L++ETG IK+ ++ GT +R+ ++ G A +
Sbjct: 35 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 94
Query: 376 ISA---------PQDA-------VLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGK 419
+ + PQ +L+ QT + PD +Q +L+V ++ G ++GK
Sbjct: 95 VHSFIAEKVREIPQAMTKPEVVNILQPQTTMN---PDRAKQA---KLIVPNSTAGLIIGK 148
Query: 420 GGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRH 476
GG+ + + + SGA++++ Q P+ + E VV ++GE E V +A+ I +++
Sbjct: 149 GGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQE 202
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 591 VPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPK---PGATETVIIISGTPEQTHA 647
V + VP +LV I G+ G L + ++++ A+I I+ PG + I+G+P T A
Sbjct: 409 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQA 468
Query: 648 AQSLIQAFVMSE 659
AQ LI V E
Sbjct: 469 AQYLISQRVTYE 480
Score = 39.3 bits (90), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 403 MTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQ-IPKCASENEEVVLINGEFE 461
+ + V N +G +LGKGG + E ++L+GA I+I K + +P + N V I G
Sbjct: 408 LVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLP--GTRNRRVT-ITGSPA 464
Query: 462 AVQEALFQITTRLRHH 477
A Q A + I+ R+ +
Sbjct: 465 ATQAAQYLISQRVTYE 480
>gi|395540426|ref|XP_003772156.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein
3-B-like [Sarcophilus harrisii]
Length = 587
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 143/317 (45%), Gaps = 49/317 (15%)
Query: 179 QENTKSSKFV----LRLLVLSTQVGCLLGKGGCVIKQIDK----------LPTCALASDE 224
Q+ + +KF L++L + VG L+GK G +K+I++ L L + E
Sbjct: 267 QKEAQDTKFTDEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQELTLYNPE 326
Query: 225 -VVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGA-PYAT 282
+ + G ++T KA + I ++ ++ D ++ +H LP ++++ G P +T
Sbjct: 327 RTITVKGSIETCGKAEEEIMKKIRESYESDLSAM----NLQAHLLPGLNLNALGLFPAST 382
Query: 283 -GHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRS 341
G + + +P + + G E T L VG +IGK G I+
Sbjct: 383 SGIPSPSTLGVPSAAAATNYLPYG------QQAETETVHLFIPAMAVGAIIGKMGQHIKQ 436
Query: 342 LKQETGCDIKVM-EAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPD---- 396
L + G IK+ ++R+++I+GP +A + Q RI + +
Sbjct: 437 LSRFAGASIKIAPPETPDAKERMVIITGPP----------EAQFKAQGRIYGKLKEENFF 486
Query: 397 --NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVV 454
E + + V S G ++GKGG + E++ L+ A + ++ +DQIP EN+EV+
Sbjct: 487 GPKEEVKLEAHIKVPSYAAGRVIGKGGKTVNELQNLTSAEV-VVPRDQIP---DENDEVI 542
Query: 455 L-INGEFEAVQEALFQI 470
+ I G F A Q A +I
Sbjct: 543 VKITGHFYACQLAQRKI 559
Score = 45.8 bits (107), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 74/348 (21%), Positives = 134/348 (38%), Gaps = 71/348 (20%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQET--GCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
R+L + VG +IGK GA IR++ ++T DI E +E + + + P +
Sbjct: 200 LRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGASEKPITIHASP----EGC 255
Query: 377 SAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIR 436
S ++ + + A+ E + ++L +N +G L+GK G + ++ + + I
Sbjct: 256 STACKIIMEIMQKEAQDTKFTDE--IPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKIT 313
Query: 437 ILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRD-AFPSINRPLNPTF- 494
I ++ E + + G E +A +I ++R + D + ++ L P
Sbjct: 314 ISPLQEL--TLYNPERTITVKGSIETCGKAEEEIMKKIRESYESDLSAMNLQAHLLPGLN 371
Query: 495 LDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRP 554
L+ + FP+ + G P P +
Sbjct: 372 LNALGLFPA------------------------STSGIPSPSTL---------------- 391
Query: 555 GMPPHMP--DMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLK 612
G+P + P+G Q E V + +P V I G+ G +K
Sbjct: 392 GVPSAAAATNYLPYGQQAETET----------------VHLFIPAMAVGAIIGKMGQHIK 435
Query: 613 QIRQISDAKITITDPK-PGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
Q+ + + A I I P+ P A E ++II+G PE AQ I + E
Sbjct: 436 QLSRFAGASIKIAPPETPDAKERMVIITGPPEAQFKAQGRIYGKLKEE 483
Score = 39.7 bits (91), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 7/110 (6%)
Query: 558 PHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRR---VPVVVPRSLVPIIQGEDGACLKQI 614
P MP + +G +G G P G G H+ + ++VP V I G++GA ++ I
Sbjct: 167 PVMPTRRGYGHRGPQRQGSPGGA---AGQNHQNDIPLRMLVPTQFVGAIIGKEGATIRNI 223
Query: 615 RQISDAKITI-TDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSETETT 663
+ + +KI I GA+E I I +PE A +I + E + T
Sbjct: 224 TKQTQSKIDIHRKENAGASEKPITIHASPEGCSTACKIIMEIMQKEAQDT 273
>gi|451847129|gb|EMD60437.1| hypothetical protein COCSADRAFT_99089 [Cochliobolus sativus ND90Pr]
Length = 364
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 80/362 (22%), Positives = 139/362 (38%), Gaps = 70/362 (19%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT R + + G +IGK G + L+ ETG V + V G DR++ ++G +
Sbjct: 45 LTLRAIVSSKEAGVIIGKAGKNVADLRDETGVRAGVSKVVQGVHDRVLSVTGSLSGISKA 104
Query: 377 SA-PQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYI 435
+L + + T RLL++ NQ+G ++G+ G I +++ SG +
Sbjct: 105 YGLAAKGLLEGAPAMGMGGVIRTDGTHPIRLLISHNQMGTIIGRQGLKIKQIQDASGVRM 164
Query: 436 RILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFL 495
+ K+ +P+ E VV + G +++A+++I L R + NP
Sbjct: 165 -VAQKEMLPQS---TERVVEVQGSPAGIEKAVWEIGKCLIDDHERGYGTVL---YNPAVR 217
Query: 496 DQ--VSPFPSF---------IGRRELSPPGMYSNFG---PSFHK---FDAVGGPPPPGSF 538
Q V P P+ +G R + G ++F P+F + DA PPPP
Sbjct: 218 VQPGVGPGPAANGGSAPAGGMGGRSYNRTGHGADFSDSPPAFSRRSGSDAASRPPPP--T 275
Query: 539 HPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRS 598
H D +I +P
Sbjct: 276 HTEDGEEMQTQNIS------------------------------------------IPSD 293
Query: 599 LVPIIQGEDGACLKQIRQISDAKITITD-PKPGATETVIIISGTPEQTHAAQSLIQAFVM 657
+V I G G+ + +IR+ S+A+I+I P E + I+G+ A L+ +
Sbjct: 294 MVGCIIGRGGSKISEIRKTSNARISIAKAPHDDTGERMFTITGSASANEKALYLLYENLE 353
Query: 658 SE 659
+E
Sbjct: 354 AE 355
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 108/250 (43%), Gaps = 33/250 (13%)
Query: 154 SKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQID 213
S + KA L + ++E P + T + +RLL+ Q+G ++G+ G IKQI
Sbjct: 99 SGISKAYGLAAKGLLEGAPAMGMGGVIRTDGT-HPIRLLISHNQMGTIIGRQGLKIKQIQ 157
Query: 214 KLPTCAL---------ASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGP 264
+ +++ VV++ G + KA+ I L+D+ R + ++ NP
Sbjct: 158 DASGVRMVAQKEMLPQSTERVVEVQGSPAGIEKAVWEIGKCLIDDHERGYGTVLYNPAVR 217
Query: 265 SHP--LPDHSVSSQGAPYA---------TGH-RDVADIHLPMPPSIPKFHESGVLDRPKP 312
P P + + AP TGH D +D PP+ + S RP P
Sbjct: 218 VQPGVGPGPAANGGSAPAGGMGGRSYNRTGHGADFSD----SPPAFSRRSGSDAASRPPP 273
Query: 313 ------SPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA-VSGTEDRLIV 365
E+ T + + VG +IG+GG+ I +++ + I + +A T +R+
Sbjct: 274 PTHTEDGEEMQTQNISIPSDMVGCIIGRGGSKISEIRKTSNARISIAKAPHDDTGERMFT 333
Query: 366 ISGPAHPDDR 375
I+G A +++
Sbjct: 334 ITGSASANEK 343
>gi|395854336|ref|XP_003799652.1| PREDICTED: RNA-binding protein Nova-2, partial [Otolemur garnettii]
Length = 487
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 98/201 (48%), Gaps = 34/201 (16%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA---VSGTEDRLIVISGPAHPDDR 375
++L G +IGKGG I L++ETG IK+ ++ GT +R+ ++ G A +
Sbjct: 30 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 89
Query: 376 ISA---------PQDA-------VLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGK 419
+ + PQ +L+ QT + PD +Q +L+V ++ G ++GK
Sbjct: 90 VHSFIAEKVREIPQAMTKPEVVNILQPQTTMN---PDRAKQA---KLIVPNSTAGLIIGK 143
Query: 420 GGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFF 479
GG+ + + + SGA++++ Q P+ + E VV ++GE E V +A+ I +++
Sbjct: 144 GGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQED-- 198
Query: 480 RDAFPSINRPLNPTFLDQVSP 500
P + LN ++ + P
Sbjct: 199 ----PQSSSCLNISYANVAGP 215
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 591 VPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPK---PGATETVIIISGTPEQTHA 647
V + VP +LV I G+ G L + ++++ A+I I+ PG + I+G+P T A
Sbjct: 404 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQA 463
Query: 648 AQSLIQAFVMSE 659
AQ LI V E
Sbjct: 464 AQYLISQRVTYE 475
Score = 39.3 bits (90), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 403 MTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQ-IPKCASENEEVVLINGEFE 461
+ + V N +G +LGKGG + E ++L+GA I+I K + +P + N V I G
Sbjct: 403 LVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLP--GTRNRRVT-ITGSPA 459
Query: 462 AVQEALFQITTRLRHH 477
A Q A + I+ R+ +
Sbjct: 460 ATQAAQYLISQRVTYE 475
>gi|390177064|ref|XP_003736269.1| GA30025, isoform C [Drosophila pseudoobscura pseudoobscura]
gi|388858893|gb|EIM52342.1| GA30025, isoform C [Drosophila pseudoobscura pseudoobscura]
Length = 554
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 90/187 (48%), Gaps = 23/187 (12%)
Query: 329 GGVIGKGGAIIRSLKQETGCDIKVMEA---VSGTEDRLIVISGPAHPD--------DRIS 377
G +IGKGG I SL+++TG +K+ ++ GT +R+ +I+G D+I
Sbjct: 62 GAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMVVLDFIMDKIR 121
Query: 378 APQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRI 437
D ++ I +E+ ++LV ++ G ++GKGG+ I ++++ SG+Y++I
Sbjct: 122 EKPDLTTKI---IDAESKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEDSGSYVQI 178
Query: 438 LGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQ 497
Q PK S E + I G+ E + A I +++ P LN ++ D
Sbjct: 179 ---SQKPKDVSLQERCITIIGDKENNKNACKMILSKIVED------PQSGTCLNVSYADV 229
Query: 498 VSPFPSF 504
P +F
Sbjct: 230 SGPVANF 236
>gi|335289843|ref|XP_003127279.2| PREDICTED: RNA-binding protein Nova-2 [Sus scrofa]
Length = 492
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 98/201 (48%), Gaps = 34/201 (16%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA---VSGTEDRLIVISGPAHPDDR 375
++L G +IGKGG I L++ETG IK+ ++ GT +R+ ++ G A +
Sbjct: 35 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 94
Query: 376 ISA---------PQDA-------VLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGK 419
+ + PQ +L+ QT + PD +Q +L+V ++ G ++GK
Sbjct: 95 VHSFIAEKVREIPQAMTKPEVVNILQPQTTMN---PDRAKQA---KLIVPNSTAGLIIGK 148
Query: 420 GGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFF 479
GG+ + + + SGA++++ Q P+ + E VV ++GE E V +A+ I +++
Sbjct: 149 GGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQED-- 203
Query: 480 RDAFPSINRPLNPTFLDQVSP 500
P + LN ++ + P
Sbjct: 204 ----PQSSSCLNISYANVAGP 220
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 591 VPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPK---PGATETVIIISGTPEQTHA 647
V + VP +LV I G+ G L + ++++ A+I I+ PG + I+G+P T A
Sbjct: 409 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQA 468
Query: 648 AQSLIQAFVMSE 659
AQ LI V E
Sbjct: 469 AQYLISQRVTYE 480
Score = 39.3 bits (90), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 403 MTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQ-IPKCASENEEVVLINGEFE 461
+ + V N +G +LGKGG + E ++L+GA I+I K + +P + N V I G
Sbjct: 408 LVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLP--GTRNRRVT-ITGSPA 464
Query: 462 AVQEALFQITTRLRHH 477
A Q A + I+ R+ +
Sbjct: 465 ATQAAQYLISQRVTYE 480
Score = 38.9 bits (89), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 589 RRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGAT--ETVIIISGTPEQTH 646
++ ++VP S +I G+ GA +K + + S A + ++ G E V+ +SG PEQ H
Sbjct: 131 KQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVH 190
Query: 647 AAQSLI 652
A S I
Sbjct: 191 KAVSAI 196
>gi|395751404|ref|XP_003780598.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein Nova-2 [Pongo
abelii]
Length = 681
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 86/167 (51%), Gaps = 28/167 (16%)
Query: 328 VGGVIGKGGAIIRSLKQETGCDIKVMEAV---SGTEDRLIVISGPAHPDDRISA------ 378
G +IGKGG I L++ETG IK V +GT +R+ ++ G A + + +
Sbjct: 144 AGSIIGKGGQTIVQLQKETGATIKXXXXVPWHTGTTERVCLVQGTAEALNAVHSFIAEKV 203
Query: 379 ---PQDA-------VLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMR 428
PQ +L+ QT + PD +Q +L+V ++ G ++GKGG+ + +
Sbjct: 204 REIPQAMTKPEVVNILQPQTTMN---PDRAKQA---KLIVPNSTAGLIIGKGGATVKAVM 257
Query: 429 KLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLR 475
+ SGA++++ Q P+ + E VV ++GE E V +A+ I +++
Sbjct: 258 EQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 301
Score = 39.3 bits (90), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 589 RRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGAT--ETVIIISGTPEQTH 646
++ ++VP S +I G+ GA +K + + S A + ++ G E V+ +SG PEQ H
Sbjct: 231 KQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVH 290
Query: 647 AAQSLI 652
A S I
Sbjct: 291 KAVSAI 296
>gi|344250764|gb|EGW06868.1| Poly(rC)-binding protein 2 [Cricetulus griseus]
Length = 306
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 140/330 (42%), Gaps = 45/330 (13%)
Query: 324 HDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAV 383
H + VG +I K G ++ +++E+G + + +R+I ++GP + + A +
Sbjct: 2 HGKEVGSIIAKKGESVKKMREESGARTSISDG--NCPERIITLAGPTNAIFKAFA--MII 57
Query: 384 LRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGK 440
+++ I+ ++ ++ + V RL+V ++Q G L+GKGG I E+R+ +GA +++ G
Sbjct: 58 DKLEEGISSSMTNSTAASRPPVALRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAG- 116
Query: 441 DQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSP 500
D +P + E + I G +++ E + QI + + P P T + P
Sbjct: 117 DMLP---NSTEWAITIAGIPQSLIECVKQICVVMLETLSQPPHP---HPKGLTITYRPKP 170
Query: 501 FPS---FIGRRELSPPGMYSNFGPSFHKFDAVG----GPPPPGSFHPHDDHSAFMHHIHR 553
S F G ++ G S P + + GPP H + H
Sbjct: 171 SSSLVIFAGGQDRYSTGSDSASFPHTTQSMCLNPDLEGPP----LELTKLHQLALQQSHF 226
Query: 554 PGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVP--VVVPRSLVPIIQGEDGACL 611
P G GF + + + + L+ I G GA +
Sbjct: 227 P------------------MTHGNTGFSAGLDASAQTTSHELTISNDLIGCIIGRQGAKI 268
Query: 612 KQIRQISDAKITITDPKPGATETVIIISGT 641
+IRQ+S A+I +P G+T+ + I+G+
Sbjct: 269 NEIRQMSGAQIKTANPVEGSTDRQVTITGS 298
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 114/270 (42%), Gaps = 51/270 (18%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + +T +S+ LRL+V ++Q G L+GKGGC IK
Sbjct: 46 TNAIFKAFAMIIDKL---EEGISSSMTNSTAASRPPVALRLVVPASQCGSLIGKGGCKIK 102
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIP 258
+I D LP +++ + I G ++ + +K I +L+ + P
Sbjct: 103 EIRESTGAQVQVAGDMLPN---STEWAITIAGIPQSLIECVKQICVVMLETLSQPPHPHP 159
Query: 259 GNPTGPSHPLPDHSV---SSQGAPYATGHRDVADIH----------LPMPP-SIPKFHES 304
T P P S+ + Y+TG + H L PP + K H+
Sbjct: 160 KGLTITYRPKPSSSLVIFAGGQDRYSTGSDSASFPHTTQSMCLNPDLEGPPLELTKLHQL 219
Query: 305 GVLDRPKP--------------SPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDI 350
+ P S + + L ++ +G +IG+ GA I ++Q +G I
Sbjct: 220 ALQQSHFPMTHGNTGFSAGLDASAQTTSHELTISNDLIGCIIGRQGAKINEIRQMSGAQI 279
Query: 351 KVMEAVSGTEDRLIVISGPAHPDDRISAPQ 380
K V G+ DR + I+G A IS PQ
Sbjct: 280 KTANPVEGSTDRQVTITGSA---ASISLPQ 306
>gi|312079928|ref|XP_003142383.1| hypothetical protein LOAG_06799 [Loa loa]
Length = 440
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 100/201 (49%), Gaps = 34/201 (16%)
Query: 296 PSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV--- 352
P+ K H S D I+ ++L VG +IGKGG +R+LK E+GC +++
Sbjct: 19 PATKKAHVSDTED------NIVQVKVLIPSAAVGALIGKGGETMRNLKSESGCRLQMSKN 72
Query: 353 MEAVSGTEDRLIVISGPAHPDDRISAPQDAVL-RVQTRIARAIPDN------REQTVMTR 405
E GT +R+ ++ G ++S D +L +++ ++ P + E+ +
Sbjct: 73 QEVYPGTNERICLVKGKIASVLKVS---DVILEKIREKVDNNTPSDIFDHKGMERKNEMK 129
Query: 406 LLVASNQIGCLLGKGGSIIAEMRKLSGAYIRI----------LGKDQIPKCASENEEVVL 455
L+V + G ++GK G+ I E+R+ +GA I++ + +++I A+E +EV++
Sbjct: 130 LVVPNTSAGMVIGKSGARIKEIREQTGANIQVYPKAGSQEAKVSQERIITIAAEQDEVLM 189
Query: 456 INGEFEAVQEALFQITTRLRH 476
+A+Q L ++ +H
Sbjct: 190 -----DALQRVLEKVAADPQH 205
>gi|403299426|ref|XP_003940488.1| PREDICTED: RNA-binding protein Nova-2 [Saimiri boliviensis
boliviensis]
Length = 508
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 90/177 (50%), Gaps = 28/177 (15%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA---VSGTEDRLIVISGPAHPDDR 375
++L G +IGKGG I L++ETG IK+ ++ GT +R+ ++ G A +
Sbjct: 219 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 278
Query: 376 ISA---------PQDA-------VLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGK 419
+ + PQ +L+ QT + PD +Q +L+V ++ G ++GK
Sbjct: 279 VHSFIAEKVREIPQAMTKPEVVNILQPQTTMN---PDRAKQA---KLIVPNSTAGLIIGK 332
Query: 420 GGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRH 476
GG+ + + + SGA++++ Q P+ + E VV ++GE E V +A+ I +++
Sbjct: 333 GGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQE 386
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 10/96 (10%)
Query: 574 VGGPMGFPDFVGPPH-------RRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITD 626
V GP+ + G P+ + VP +LV I G+ G L + ++++ A+I I+
Sbjct: 401 VAGPVANSNPTGSPYASPXXXXXXXXIAVPENLVGAILGKGGKTLVEYQELTGARIQISK 460
Query: 627 PK---PGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
PG + I+G+P T AAQ LI V E
Sbjct: 461 KGEFLPGTRNRRVTITGSPAATQAAQYLISQRVTYE 496
>gi|351698877|gb|EHB01796.1| Poly(rC)-binding protein 4 [Heterocephalus glaber]
Length = 443
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 99/204 (48%), Gaps = 24/204 (11%)
Query: 274 SSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIG 333
+SQ + VA P PP ++G+ + P+ S LT R+L H + VG +IG
Sbjct: 20 ASQATAWTHSQATVA----PAPPDRMSSSDAGLEEEPELS-ITLTLRMLMHGKEVGSIIG 74
Query: 334 KGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIAR- 392
K G ++ +++++ I + E +R+ I+G +A AV + ++
Sbjct: 75 KKGETVKRIREQSSARITISEG--SCPERITTITG------STAAVFHAVSMIAFKLDED 126
Query: 393 --AIPDNREQT----VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKC 446
A P N V RL++ ++Q G L+GK G+ I E+R+ +GA +++ G D +P
Sbjct: 127 LCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAG-DLLP-- 183
Query: 447 ASENEEVVLINGEFEAVQEALFQI 470
+ E V ++G +A+ + QI
Sbjct: 184 -NSTERAVTVSGVPDAIILCVRQI 206
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 78/358 (21%), Positives = 134/358 (37%), Gaps = 118/358 (32%)
Query: 178 DQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKLPTCALASDE------VVQITGE 231
++E S LR+L+ +VG ++GK G +K+I + + + E + ITG
Sbjct: 49 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGS 108
Query: 232 VDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIH 291
V A+ +I+ +L + D + P N
Sbjct: 109 TAAVFHAVSMIAFKLDE----DLCAAPAN------------------------------- 133
Query: 292 LPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIK 351
G + RP +T RL+ + G +IGK G I+ +++ TG ++
Sbjct: 134 ------------GGSVSRPP-----VTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQ 176
Query: 352 VM-EAVSGTEDRLIVISG--------------------------PAHPDDRI-----SAP 379
V + + + +R + +SG P HP + SA
Sbjct: 177 VAGDLLPNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSAN 236
Query: 380 QD-------------AVLRVQTRIARAIP----------DNREQTVMTRLLVASNQIGCL 416
Q V ++Q A+P D QT LV ++ IGC+
Sbjct: 237 QGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSVVPGLDPSAQTSSQEFLVPNDLIGCV 296
Query: 417 LGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRL 474
+G+ GS I+E+R++SGA+I+I + + E V I G ++ A + IT L
Sbjct: 297 IGRQGSKISEIRQMSGAHIKIGNQAE-----GAGERHVTITGSPVSIALAQYLITACL 349
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%)
Query: 594 VVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQ 653
+VP L+ + G G+ + +IRQ+S A I I + GA E + I+G+P AQ LI
Sbjct: 287 LVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYLIT 346
Query: 654 AFVMSETETT 663
A + + T+
Sbjct: 347 ACLETAKSTS 356
>gi|126341837|ref|XP_001363414.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
[Monodelphis domestica]
Length = 586
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 144/317 (45%), Gaps = 49/317 (15%)
Query: 179 QENTKSSKFV----LRLLVLSTQVGCLLGKGGCVIKQIDK----------LPTCALASDE 224
Q+ + +KF L++L + VG L+GK G +K+I++ L L + E
Sbjct: 267 QKEAQDTKFTDEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQELTLYNPE 326
Query: 225 -VVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGA-PYAT 282
+ + G ++T KA + I ++ ++ D ++ +H LP ++++ G P +T
Sbjct: 327 RTITVKGSIETCGKAEEEIMKKIRESYESDLSAM----NLQAHLLPGLNLNALGLFPAST 382
Query: 283 -GHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRS 341
G + + +P + + G E T L VG +IGK G I+
Sbjct: 383 SGIPSPSTLGVPSAAAATNYLPYG------QQAETETVHLFIPAMAVGAIIGKMGQHIKQ 436
Query: 342 LKQETGCDIKVM-EAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPD---- 396
L + G IK+ ++R+++I+GP +A + Q RI + +
Sbjct: 437 LSRFAGASIKIAPPETPDAKERMVIITGPP----------EAQFKAQGRIYGKLKEENFF 486
Query: 397 --NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVV 454
E + ++ V S G ++GKGG + E++ L+ A + ++ +DQIP EN+EV+
Sbjct: 487 GPKEEVKLEAQIKVPSYAAGRVIGKGGKTVNELQNLTSAEV-VVPRDQIP---DENDEVI 542
Query: 455 L-INGEFEAVQEALFQI 470
+ I G F A Q A +I
Sbjct: 543 VKITGHFYACQLAQRKI 559
Score = 45.4 bits (106), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 74/348 (21%), Positives = 134/348 (38%), Gaps = 71/348 (20%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQET--GCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
R+L + VG +IGK GA IR++ ++T DI E +E + + + P +
Sbjct: 200 LRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGASEKPITIHASP----EGC 255
Query: 377 SAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIR 436
S ++ + + A+ E + ++L +N +G L+GK G + ++ + + I
Sbjct: 256 STACKIIMEIMQKEAQDTKFTDE--IPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKIT 313
Query: 437 ILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRD-AFPSINRPLNPTF- 494
I ++ E + + G E +A +I ++R + D + ++ L P
Sbjct: 314 ISPLQEL--TLYNPERTITVKGSIETCGKAEEEIMKKIRESYESDLSAMNLQAHLLPGLN 371
Query: 495 LDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRP 554
L+ + FP+ + G P P +
Sbjct: 372 LNALGLFPA------------------------STSGIPSPSTL---------------- 391
Query: 555 GMPPHMP--DMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLK 612
G+P + P+G Q E V + +P V I G+ G +K
Sbjct: 392 GVPSAAAATNYLPYGQQAETET----------------VHLFIPAMAVGAIIGKMGQHIK 435
Query: 613 QIRQISDAKITITDPK-PGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
Q+ + + A I I P+ P A E ++II+G PE AQ I + E
Sbjct: 436 QLSRFAGASIKIAPPETPDAKERMVIITGPPEAQFKAQGRIYGKLKEE 483
>gi|225000564|gb|AAI72604.1| Neuro-oncological ventral antigen 2 [synthetic construct]
Length = 583
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 98/201 (48%), Gaps = 34/201 (16%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA---VSGTEDRLIVISGPAHPDDR 375
++L G +IGKGG I L++ETG IK+ ++ GT +R+ ++ G A +
Sbjct: 126 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 185
Query: 376 ISA---------PQDA-------VLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGK 419
+ + PQ +L+ QT + PD +Q +L+V ++ G ++GK
Sbjct: 186 VHSFIAEKVREIPQAMTKPEVVNILQPQTTMN---PDRAKQA---KLIVPNSTAGLIIGK 239
Query: 420 GGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFF 479
GG+ + + + SGA++++ Q P+ + E VV ++GE E V +A+ I +++
Sbjct: 240 GGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQED-- 294
Query: 480 RDAFPSINRPLNPTFLDQVSP 500
P + LN ++ + P
Sbjct: 295 ----PQSSSCLNISYANVAGP 311
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 591 VPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPK---PGATETVIIISGTPEQTHA 647
V + VP +LV I G+ G L + ++++ A+I I+ PG + I+G+P T A
Sbjct: 500 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQA 559
Query: 648 AQSLIQAFVMSE 659
AQ LI V E
Sbjct: 560 AQYLISQRVTYE 571
Score = 39.7 bits (91), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 403 MTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQ-IPKCASENEEVVLINGEFE 461
+ + V N +G +LGKGG + E ++L+GA I+I K + +P + N V I G
Sbjct: 499 LVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLP--GTRNRRVT-ITGSPA 555
Query: 462 AVQEALFQITTRLRHH 477
A Q A + I+ R+ +
Sbjct: 556 ATQAAQYLISQRVTYE 571
>gi|281353861|gb|EFB29445.1| hypothetical protein PANDA_010268 [Ailuropoda melanoleuca]
Length = 596
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 117/496 (23%), Positives = 189/496 (38%), Gaps = 145/496 (29%)
Query: 39 SKSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEAS 98
SK P + R+L P + +IGK+G + I++ T I V
Sbjct: 189 SKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVH---------------- 232
Query: 99 DNKKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQK 158
R EN G E S+ L++ + TS K
Sbjct: 233 ---------------RKENAGAAEKSITI-------------------LSTPEGTSAACK 258
Query: 159 ALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDK---- 214
++L + + E D + T+ + L++L + VG L+GK G +K+I++
Sbjct: 259 SILEIMHK--------EAQDIKFTE--EIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDT 308
Query: 215 ------LPTCALASDE-VVQITGEVDTVRKALKLISHQLLDNSPRDHES-------IPG- 259
L L + E + + G V+T KA + I ++ ++ D S IPG
Sbjct: 309 KITISPLQELTLYNPERTITVKGNVETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGL 368
Query: 260 --NPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEIL 317
N G P + G P A M P P+F +S E
Sbjct: 369 NLNALGLFPPTSGMPPPTSGPPSA------------MTPPYPQFEQS----------ETE 406
Query: 318 TFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRI 376
T L VG +IGK G I+ L + G IK+ A + + R+++I+GP
Sbjct: 407 TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPP------ 460
Query: 377 SAPQDAVLRVQTRIARAIPD------NREQTVMTRLLVASNQIGCLLGKGGSI------- 423
+A + Q RI I + E + + V S G ++GKGG
Sbjct: 461 ----EAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTASTSAKP 516
Query: 424 ----------IAEMRKLSGAYIRILGKDQIPKCASENEEVVL-INGEFEAVQEA---LFQ 469
+ E++ LS A + ++ +DQ P EN++VV+ I G F A Q A + +
Sbjct: 517 VQWTCVYLVQVNELQNLSSAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQE 572
Query: 470 ITTRLRHHFFRDAFPS 485
I T+++ H + A S
Sbjct: 573 ILTQVKQHQQQKALQS 588
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 137/352 (38%), Gaps = 67/352 (19%)
Query: 311 KPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV--MEAVSGTEDRLIVISG 368
K P L RLL + VG +IGK GA IR++ ++T I V E E + ++S
Sbjct: 190 KQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILST 249
Query: 369 PAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMR 428
P + SA ++L + + A+ I E + ++L +N +G L+GK G + ++
Sbjct: 250 P----EGTSAACKSILEIMHKEAQDIKFTEE--IPLKILAHNNFVGRLIGKEGRNLKKIE 303
Query: 429 KLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINR 488
+ + I I ++ E + + G E +A +I ++R + D S+N
Sbjct: 304 QDTDTKITISPLQEL--TLYNPERTITVKGNVETCAKAEEEIMKKIRESYEND-IASMN- 359
Query: 489 PLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFM 548
L + PG+ N + F G PPP S P SA
Sbjct: 360 -LQAHLI-----------------PGLNLN---ALGLFPPTSGMPPPTSGPP----SAM- 393
Query: 549 HHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDG 608
PP +P F V + +P V I G+ G
Sbjct: 394 -------TPP---------------------YPQFEQSETETVHLFIPALSVGAIIGKQG 425
Query: 609 ACLKQIRQISDAKITITDPK-PGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
+KQ+ + + A I I + P A ++II+G PE AQ I + E
Sbjct: 426 QHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFKAQGRIYGKIKEE 477
>gi|119577801|gb|EAW57397.1| neuro-oncological ventral antigen 2 [Homo sapiens]
Length = 556
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 98/201 (48%), Gaps = 34/201 (16%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA---VSGTEDRLIVISGPAHPDDR 375
++L G +IGKGG I L++ETG IK+ ++ GT +R+ ++ G A +
Sbjct: 99 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 158
Query: 376 ISA---------PQDA-------VLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGK 419
+ + PQ +L+ QT + PD +Q +L+V ++ G ++GK
Sbjct: 159 VHSFIAEKVREIPQAMTKPEVVNILQPQTTMN---PDRAKQA---KLIVPNSTAGLIIGK 212
Query: 420 GGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFF 479
GG+ + + + SGA++++ Q P+ + E VV ++GE E V +A+ I +++
Sbjct: 213 GGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQED-- 267
Query: 480 RDAFPSINRPLNPTFLDQVSP 500
P + LN ++ + P
Sbjct: 268 ----PQSSSCLNISYANVAGP 284
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 591 VPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPK---PGATETVIIISGTPEQTHA 647
V + VP +LV I G+ G L + ++++ A+I I+ PG + I+G+P T A
Sbjct: 473 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQA 532
Query: 648 AQSLIQAFVMSE 659
AQ LI V E
Sbjct: 533 AQYLISQRVTYE 544
Score = 38.9 bits (89), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 403 MTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQ-IPKCASENEEVVLINGEFE 461
+ + V N +G +LGKGG + E ++L+GA I+I K + +P + N V I G
Sbjct: 472 LVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLP--GTRNRRVT-ITGSPA 528
Query: 462 AVQEALFQITTRLRHH 477
A Q A + I+ R+ +
Sbjct: 529 ATQAAQYLISQRVTYE 544
Score = 38.9 bits (89), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 589 RRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGAT--ETVIIISGTPEQTH 646
++ ++VP S +I G+ GA +K + + S A + ++ G E V+ +SG PEQ H
Sbjct: 195 KQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVH 254
Query: 647 AAQSLI 652
A S I
Sbjct: 255 KAVSAI 260
>gi|410931620|ref|XP_003979193.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Takifugu rubripes]
Length = 211
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 91/178 (51%), Gaps = 23/178 (12%)
Query: 301 FHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GT 359
F E + R + +PEI T + + VG +IGK G I+ L + G IK+ A S +
Sbjct: 8 FQEGSPVTRIQ-TPEIETVHVYIPAQAVGAIIGKKGQHIKQLSRFAGASIKIAPAESPDS 66
Query: 360 EDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPD------NREQTVMTRLLVASNQI 413
+ R+++++GP +A + Q RI + + E + T + +A+
Sbjct: 67 KMRMVIVTGPP----------EAQFKAQGRIYGKLKEENFFGPKEEVKLETHIKMAAAAA 116
Query: 414 GCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVL-INGEFEAVQEALFQI 470
G ++GKGG + E++ L+ A + ++ ++Q P EN++V++ ING F A Q A +I
Sbjct: 117 GRVIGKGGKTVNELQNLTAAEV-VVPREQTP---DENDQVIVKINGHFYASQCAQRKI 170
>gi|332215027|ref|XP_003256638.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 1 [Nomascus leucogenys]
Length = 599
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 111/501 (22%), Positives = 198/501 (39%), Gaps = 126/501 (25%)
Query: 14 DDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIM--------FRVLCPVSKIDGVIGKDG 65
D+ + P+ +++Q+ GD+S + + PGG R+L P + +IGK+G
Sbjct: 157 DEEVSSPSPPQRAQR--GDHSSREQGHA-PGGTSQARQIDFPLRILVPTQFVGAIIGKEG 213
Query: 66 EMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASV 125
+ I++ T + I R EN+G E V
Sbjct: 214 LTIKNITKQTQSRV-------------------------------DIHRKENSGAAEKPV 242
Query: 126 ADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSS 185
+ EG+ +A ++ E M + ET++A++
Sbjct: 243 TIHA-------TPEGT---------------SEACRMILEIMQKEADETKLAEE------ 274
Query: 186 KFVLRLLVLSTQVGCLLGKGGCVIKQID-----KLPTCALAS------DEVVQITGEVDT 234
L++L + VG L+GK G +K+I+ K+ +L + + + G V+
Sbjct: 275 -IPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEA 333
Query: 235 VRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVAD----- 289
A I +L + D ++ ++ +P ++S+ G ++TG ++
Sbjct: 334 CASAEIEIMKKLREAFENDMLAV----NQQANLIPGLNLSALGI-FSTGLSVLSPPAGPR 388
Query: 290 ------------IHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGA 337
H S+ H+ G PE L + VG +IGK GA
Sbjct: 389 GAPPAAPYHPFATHSGYFSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGA 448
Query: 338 IIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPD 396
I+ L + G IK+ A +R+++I+GP +A + Q RI + +
Sbjct: 449 HIKQLARFAGASIKIAPAEGPDVSERMVIITGPP----------EAQFKAQGRIFGKLKE 498
Query: 397 ------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASEN 450
E + + V S+ G ++GKGG + E++ L+ A + I+ +DQ P EN
Sbjct: 499 ENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP---DEN 554
Query: 451 EEVVL-INGEFEAVQEALFQI 470
EEV++ I G F A Q A +I
Sbjct: 555 EEVIVRIIGHFFASQTAQRKI 575
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 141/343 (41%), Gaps = 55/343 (16%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV-MEAVSGTEDRLIVISGPAHPDDRIS 377
R+L + VG +IGK G I+++ ++T + + + SG ++ + I A P+
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIH--ATPEGTSE 253
Query: 378 APQDAVLRV------QTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLS 431
A + +L + +T++A IP ++L + +G L+GK G + ++ +
Sbjct: 254 ACR-MILEIMQKEADETKLAEEIP--------LKILAHNGLVGRLIGKEGRNLKKIEHET 304
Query: 432 GAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLN 491
G I I + E + + G EA A +I +LR F D ++N+ N
Sbjct: 305 GTKITISSLQDL--SIYNPERTITVKGTVEACASAEIEIMKKLREAFENDML-AVNQQAN 361
Query: 492 PTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHI 551
I LS G++S G PP +HP HS + +
Sbjct: 362 ------------LIPGLNLSALGIFSTGLSVLSPPAGPRGAPPAAPYHPFATHSGYFSSL 409
Query: 552 HRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRR-VPVVVPRSLVPIIQGEDGAC 610
+ PH +GP FP P + V + +P V I G+ GA
Sbjct: 410 Y-----PH----HQFGP-----------FPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAH 449
Query: 611 LKQIRQISDAKITITDPK-PGATETVIIISGTPEQTHAAQSLI 652
+KQ+ + + A I I + P +E ++II+G PE AQ I
Sbjct: 450 IKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI 492
>gi|115399196|ref|XP_001215187.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114192070|gb|EAU33770.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 459
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 94/378 (24%), Positives = 151/378 (39%), Gaps = 43/378 (11%)
Query: 309 RPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
RP+ + R + + VIGKGG + +++ +G V + G +R++ +SG
Sbjct: 94 RPQDESSWIHIRAVISSQEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSG 153
Query: 369 PAHPDDRISAPQDAVLRVQTRIARAIPDN--------REQTVMTRLLVASNQIGCLLGKG 420
PQDAV + I R + + + +T RLL+ IG ++GKG
Sbjct: 154 ----------PQDAVAKAFGLIIRTLNNEPLDAPSTAQSKTYPLRLLIPHILIGSIIGKG 203
Query: 421 GSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFR 480
G I E+++ SGA R+ D ++E V+L G +AV A + + L
Sbjct: 204 GGRIREIQEASGA--RLNASDACLPLSTERSLVIL--GVADAVHIATYYVAVTLVEQLTE 259
Query: 481 D---------AFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHK--FDAV 529
A S QV P+ + P + P ++ A
Sbjct: 260 RFGGPAASAYATRSGGPAGAVPGGMQVVPYVPQPAGGQYGHPDTFKRHHPHPNRGAAGAY 319
Query: 530 GGPPPPGSFHPHDDHSAFMHHIHRP----GMPPHMPDMKPWGPQGLMEVGGPMGFPDFVG 585
G P G P MH+ P G PH P P+ PQ GGP G
Sbjct: 320 GVPYLHGQAAPTPVAQPAMHYGAAPTPYAGAGPHQP--APYPPQVPQPRGGPTPVAPVAG 377
Query: 586 PPHRRVP----VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGT 641
P + +P +V I G+ GA + +IR +S + I I +P+ + E ++ I+GT
Sbjct: 378 GAMPGQPLTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQENSNERLVTITGT 437
Query: 642 PEQTHAAQSLIQAFVMSE 659
E A ++ + + SE
Sbjct: 438 QECNQMALYMLYSRLESE 455
>gi|312380039|gb|EFR26147.1| hypothetical protein AND_07973 [Anopheles darlingi]
Length = 552
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 106/231 (45%), Gaps = 24/231 (10%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA---VSGTEDRLIVISGPAHPDDR 375
F+ L G +IGKGG I SL+++ G +K+ ++ GT +R+ +ISG D
Sbjct: 43 FKTLVPSVAAGAIIGKGGETIASLQKDAGARVKMSKSHDFYPGTTERVCLISGTV---DG 99
Query: 376 ISAPQDAVL---RVQTRIARAIPDN-----REQTVMTRLLVASNQIGCLLGKGGSIIAEM 427
I D ++ R + + +A+ + +E+ ++LV ++ G ++GK G+ I ++
Sbjct: 100 ILTVLDFIIDKIREKPDMTKALTEADAKQAQERDKQVKILVPNSTAGMIIGKAGAYIKQI 159
Query: 428 RKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSIN 487
++ SG+Y++I Q PK + E + I GE E + A I ++ PS
Sbjct: 160 KEESGSYVQI---SQKPKDLTLQERCITIIGEKENNKVACKMILAKIVED------PSSG 210
Query: 488 RPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFD-AVGGPPPPGS 537
LN ++ D P +F NF S + A+ GP P +
Sbjct: 211 TCLNVSYADINGPVANFNPTGSPFAASQTPNFSSSTASLNSAISGPLPSAT 261
>gi|449266969|gb|EMC77947.1| Insulin-like growth factor 2 mRNA-binding protein 2, partial
[Columba livia]
Length = 522
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 138/348 (39%), Gaps = 53/348 (15%)
Query: 314 PEILTF--RLLCHDERVGGVIGKGGAIIRSLKQET--GCDIKVMEAVSGTEDRLIVISGP 369
P+ L F R+L + VG +IGK G I++L ++T DI E E + + + P
Sbjct: 110 PKQLEFPLRMLVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRKENAGAAEKPITIHATP 169
Query: 370 AHPDDRISAPQDAVLRV--QTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEM 427
+ D + + +T+ A IP ++L ++ +G L+GK G + ++
Sbjct: 170 EGCSEACRMILDIMQKEADETKSAEEIP--------LKILAHNSLVGRLIGKEGRNLKKI 221
Query: 428 RKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSIN 487
+ +G I I + E + + G EA +A +I +LR + D ++N
Sbjct: 222 EQDTGTKITISPLQDL--TIYNPERTITVKGSTEACSKAQVEIMKKLREAYENDVV-AVN 278
Query: 488 RPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAF 547
+ N I L+ G++S G +HP SA+
Sbjct: 279 QQAN------------LIPGLNLNALGIFSTGLSMLPSTPGARGAAAATPYHPFASSSAY 326
Query: 548 MHHIHRPGMPP--HMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQG 605
+ ++ G PP P P P V + +P V I G
Sbjct: 327 LSGLY--GAPPGSAFPHQHPL-------------------PEQEVVNLFIPTQAVGAIIG 365
Query: 606 EDGACLKQIRQISDAKITITDPK-PGATETVIIISGTPEQTHAAQSLI 652
+ G +KQ+ + + A I I + P A+E ++II+G PE AQ I
Sbjct: 366 KKGQHIKQLARFAGASIKIAPAEGPDASERMVIITGPPEAQFKAQGRI 413
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 142/329 (43%), Gaps = 54/329 (16%)
Query: 178 DQENTKSSKFV-LRLLVLSTQVGCLLGKGGCVIKQID-----KLPTCALAS------DEV 225
+ + TKS++ + L++L ++ VG L+GK G +K+I+ K+ L +
Sbjct: 186 EADETKSAEEIPLKILAHNSLVGRLIGKEGRNLKKIEQDTGTKITISPLQDLTIYNPERT 245
Query: 226 VQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGA------- 278
+ + G + KA I +L + D ++ ++ +P ++++ G
Sbjct: 246 ITVKGSTEACSKAQVEIMKKLREAYENDVVAV----NQQANLIPGLNLNALGIFSTGLSM 301
Query: 279 -PYATGHRDVADIHLPMPPSIPKFHESGVLDRP--------KPSPEILTFRLLCHDERVG 329
P G R A P + + SG+ P P PE L + VG
Sbjct: 302 LPSTPGARGAAAATPYHPFASSSAYLSGLYGAPPGSAFPHQHPLPEQEVVNLFIPTQAVG 361
Query: 330 GVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRISAPQDAVLRVQT 388
+IGK G I+ L + G IK+ A +R+++I+GP +A + Q
Sbjct: 362 AIIGKKGQHIKQLARFAGASIKIAPAEGPDASERMVIITGPP----------EAQFKAQG 411
Query: 389 RIARAIPD------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQ 442
RI + + E + + V S G ++GKGG + E++ L+ A + I+ +DQ
Sbjct: 412 RIFGKLKEENFFNPKEEVKLEAHIKVPSFAAGRVIGKGGKTVNELQNLTSAEV-IVPRDQ 470
Query: 443 IPKCASENEEVVL-INGEFEAVQEALFQI 470
P ENEEV++ I G F A Q A +I
Sbjct: 471 TP---DENEEVIVKIIGHFFASQTAQRKI 496
>gi|325087770|gb|EGC41080.1| KH domain RNA-binding protein [Ajellomyces capsulatus H88]
Length = 321
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 82/174 (47%), Gaps = 5/174 (2%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT R + + G +IGK G + L+ ETG V + V G DR++ ++GP +
Sbjct: 44 LTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGPLQGTAKA 103
Query: 377 SA-PQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYI 435
A +L ++ + T RLL++ NQ+G ++G+ G I ++ SG +
Sbjct: 104 YAIVAKGLLEGAPQLGMGGVASNNGTHPVRLLISHNQMGTIIGRQGLKIKYIQDASGVRM 163
Query: 436 RILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRP 489
+ K+ +P+ E +V + G E +++A+++I L + R + P
Sbjct: 164 -VAQKEMLPQS---TERIVEVQGTPEGIEKAVWEIGKCLIDDWQRGTGTVLYNP 213
>gi|194903195|ref|XP_001980824.1| GG16798 [Drosophila erecta]
gi|190652527|gb|EDV49782.1| GG16798 [Drosophila erecta]
Length = 572
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 91/187 (48%), Gaps = 23/187 (12%)
Query: 329 GGVIGKGGAIIRSLKQETGCDIKVMEA---VSGTEDRLIVISGPAHP--------DDRIS 377
G +IGKGG I SL+++TG +K+ ++ GT +R+ +I+G D+I
Sbjct: 78 GAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMVVLEFIMDKIR 137
Query: 378 APQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRI 437
D ++ ++ + +Q ++LV ++ G ++GKGG+ I ++++ SG+Y++I
Sbjct: 138 EKPDLTNKIVDAESKQTQERDKQV---KILVPNSTAGMIIGKGGAFIKQIKEESGSYVQI 194
Query: 438 LGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQ 497
Q PK S E + I G+ E + A I +++ P LN ++ D
Sbjct: 195 ---SQKPKDVSLQERCITIIGDKENNKNACKMILSKIVED------PQSGTCLNVSYADV 245
Query: 498 VSPFPSF 504
P +F
Sbjct: 246 SGPVANF 252
>gi|444513545|gb|ELV10391.1| Poly(rC)-binding protein 4 [Tupaia chinensis]
Length = 399
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 93/198 (46%), Gaps = 23/198 (11%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT R+L H + VG +IGK G ++ +++++ I + E +R+ I+G
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITG------ST 69
Query: 377 SAPQDAVLRVQTRIAR---AIPDNREQT----VMTRLLVASNQIGCLLGKGGSIIAEMRK 429
+A AV + ++ A P N V RL++ ++Q G L+GK G+ I E+R+
Sbjct: 70 AAVFHAVSMIAFKLDEDLCAAPANGSNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE 129
Query: 430 LSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRP 489
+GA +++ G D +P + E V ++G +A+ + QI + F P
Sbjct: 130 TTGAQVQVAG-DLLP---NSTERAVTVSGVPDAIILCVRQICAVILEGFSVQGQYGAVTP 185
Query: 490 LNPTFLDQVS----PFPS 503
T L Q+S PF S
Sbjct: 186 AEVTKLQQLSGHAVPFAS 203
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 74/333 (22%), Positives = 128/333 (38%), Gaps = 93/333 (27%)
Query: 178 DQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKLPTCALASDE------VVQITGE 231
++E S LR+L+ +VG ++GK G +K+I + + + E + ITG
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGS 68
Query: 232 VDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIH 291
V A+ +I+ +L + D + P N + S P
Sbjct: 69 TAAVFHAVSMIAFKLDE----DLCAAPANGSNVSRPP----------------------- 101
Query: 292 LPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIK 351
+T RL+ + G +IGK G I+ +++ TG ++
Sbjct: 102 -------------------------VTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQ 136
Query: 352 VME-----------AVSGTEDRLI---------VISGPAHPDDRISAPQDAVLRVQTRIA 391
V VSG D +I ++ G + + V ++Q
Sbjct: 137 VAGDLLPNSTERAVTVSGVPDAIILCVRQICAVILEGFSVQGQYGAVTPAEVTKLQQLSG 196
Query: 392 RAIP----------DNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKD 441
A+P D QT LV ++ IGC++G+ GS I+E+R++SGA+I+I +
Sbjct: 197 HAVPFASPSVVPGLDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQA 256
Query: 442 QIPKCASENEEVVLINGEFEAVQEALFQITTRL 474
+ E V I G ++ A + IT L
Sbjct: 257 E-----GAGERHVTITGSPVSIALAQYLITACL 284
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 83/204 (40%), Gaps = 39/204 (19%)
Query: 177 ADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI------------DKLPTCALASDE 224
A+ N LRL++ ++Q G L+GK G IK+I D LP +++
Sbjct: 92 ANGSNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPN---STER 148
Query: 225 VVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGH 284
V ++G D + ++ I +L+ S QG A
Sbjct: 149 AVTVSGVPDAIILCVRQICAVILEG-----------------------FSVQGQYGAVTP 185
Query: 285 RDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQ 344
+V + ++P F V+ PS + + L ++ +G VIG+ G+ I ++Q
Sbjct: 186 AEVTKLQQLSGHAVP-FASPSVVPGLDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQ 244
Query: 345 ETGCDIKVMEAVSGTEDRLIVISG 368
+G IK+ G +R + I+G
Sbjct: 245 MSGAHIKIGNQAEGAGERHVTITG 268
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%)
Query: 594 VVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQ 653
+VP L+ + G G+ + +IRQ+S A I I + GA E + I+G+P AQ LI
Sbjct: 222 LVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYLIT 281
Query: 654 AFVMSETETT 663
A + + T+
Sbjct: 282 ACLETAKSTS 291
>gi|225682425|gb|EEH20709.1| KH domain RNA-binding protein [Paracoccidioides brasiliensis Pb03]
Length = 364
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 82/168 (48%), Gaps = 9/168 (5%)
Query: 316 ILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDR 375
+LT R + + G +IGK G + L+ ETG V + V G DR++ ++GP +
Sbjct: 44 MLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGPLQGAAK 103
Query: 376 ISAPQDAVLRV---QTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSG 432
A L Q + + +N V RLL++ NQ+G ++G+ G I ++ SG
Sbjct: 104 AYAIVAKSLLEGAPQLGMGGVVSNNGTHPV--RLLISHNQMGTIIGRQGLKIKYIQDASG 161
Query: 433 AYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFR 480
+ + K+ +P+ E +V + G E +++A+++I L + R
Sbjct: 162 VRM-VAQKEMLPQS---TERIVEVQGTPEGIEKAVWEIGKCLIDDWQR 205
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 104/249 (41%), Gaps = 40/249 (16%)
Query: 158 KALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKLPT 217
KA +V + ++E P+ + + + V RLL+ Q+G ++G+ G IK I
Sbjct: 103 KAYAIVAKSLLEGAPQLGMGGVVSNNGTHPV-RLLISHNQMGTIIGRQGLKIKYIQDASG 161
Query: 218 CAL---------ASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSH-- 266
+ +++ +V++ G + + KA+ I L+D+ R ++ NP +
Sbjct: 162 VRMVAQKEMLPQSTERIVEVQGTPEGIEKAVWEIGKCLIDDWQRGTGTVLYNPAVRASVG 221
Query: 267 --PLPD---------------HSVSSQGAPYA--TGHRDVADIHLPMPPSIPKFHESGVL 307
P+ + ++ + GA ++ TG IP E G
Sbjct: 222 GAPINNSLGSGGSSGGYGGRSYNRTGNGADFSDQTGGYSRRSNSDAANRGIPLVTEDG-- 279
Query: 308 DRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA-VSGTEDRLIVI 366
E+ T + + VG +IG+GG+ I +++ +G I + +A T +R+ I
Sbjct: 280 ------EEVQTQNISIPSDMVGCIIGRGGSKISEIRRSSGARISIAKAPHDETGERMFTI 333
Query: 367 SGPAHPDDR 375
G A +++
Sbjct: 334 MGSAAANEK 342
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 7/92 (7%)
Query: 392 RAIP---DNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCAS 448
R IP ++ E+ + + S+ +GC++G+GGS I+E+R+ SGA I I + P +
Sbjct: 270 RGIPLVTEDGEEVQTQNISIPSDMVGCIIGRGGSKISEIRRSSGARISIA---KAPHDET 326
Query: 449 ENEEVVLINGEFEAVQEALFQITTRLRHHFFR 480
E + I G A ++AL+ + L R
Sbjct: 327 -GERMFTIMGSAAANEKALYLLYENLEAEKMR 357
>gi|451997944|gb|EMD90409.1| hypothetical protein COCHEDRAFT_1225891 [Cochliobolus
heterostrophus C5]
Length = 365
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 76/360 (21%), Positives = 135/360 (37%), Gaps = 65/360 (18%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT R + + G +IGK G + L+ ETG V + V G DR++ ++G +
Sbjct: 45 LTLRAIVSSKEAGVIIGKAGKNVADLRDETGVRAGVSKVVQGVHDRVLSVTGSLSGISKA 104
Query: 377 SA-PQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYI 435
+L + + T RLL++ NQ+G ++G+ G I +++ SG +
Sbjct: 105 YGLAAKGLLEGAPAMGMGGVIRTDGTHPIRLLISHNQMGTIIGRQGLKIKQIQDASGVRM 164
Query: 436 RILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPL----- 490
+ K+ +P+ E +V + G +++A+++I L R + P
Sbjct: 165 -VAQKEMLPQS---TERIVEVQGSPAGIEKAVWEIGKCLIDDHERGYGTVLYNPAVRVQP 220
Query: 491 ----NPTFLDQVSPFPSFIGRRELSPPGMYSNFG---PSFHK---FDAVGGPPPPGSFHP 540
P +P G R + G ++F P+F + DA PPPP H
Sbjct: 221 GVGPGPAANGGSAPAGGMGGGRSYNRTGHGADFSDSPPAFSRRSGSDAASRPPPP--THT 278
Query: 541 HDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLV 600
D +I +P +V
Sbjct: 279 EDGEEMQTQNIS------------------------------------------IPSDMV 296
Query: 601 PIIQGEDGACLKQIRQISDAKITITD-PKPGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
I G G+ + +IR+ S+A+I+I P E + I+G+ A L+ + +E
Sbjct: 297 GCIIGRGGSKISEIRKTSNARISIAKAPHDDTGERMFTITGSASANEKALYLLYENLEAE 356
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 108/251 (43%), Gaps = 34/251 (13%)
Query: 154 SKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQID 213
S + KA L + ++E P + T + +RLL+ Q+G ++G+ G IKQI
Sbjct: 99 SGISKAYGLAAKGLLEGAPAMGMGGVIRTDGT-HPIRLLISHNQMGTIIGRQGLKIKQIQ 157
Query: 214 KLPTCAL---------ASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGP 264
+ +++ +V++ G + KA+ I L+D+ R + ++ NP
Sbjct: 158 DASGVRMVAQKEMLPQSTERIVEVQGSPAGIEKAVWEIGKCLIDDHERGYGTVLYNPAVR 217
Query: 265 SHP--LPDHSVSSQGAPYA----------TGH-RDVADIHLPMPPSIPKFHESGVLDRPK 311
P P + + AP TGH D +D PP+ + S RP
Sbjct: 218 VQPGVGPGPAANGGSAPAGGMGGGRSYNRTGHGADFSD----SPPAFSRRSGSDAASRPP 273
Query: 312 P------SPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA-VSGTEDRLI 364
P E+ T + + VG +IG+GG+ I +++ + I + +A T +R+
Sbjct: 274 PPTHTEDGEEMQTQNISIPSDMVGCIIGRGGSKISEIRKTSNARISIAKAPHDDTGERMF 333
Query: 365 VISGPAHPDDR 375
I+G A +++
Sbjct: 334 TITGSASANEK 344
>gi|4235140|gb|AAD13116.1| RNA-binding protein Nova-2 [AA 29-492] [Homo sapiens]
Length = 464
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 98/201 (48%), Gaps = 34/201 (16%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA---VSGTEDRLIVISGPAHPDDR 375
++L G +IGKGG I L++ETG IK+ ++ GT +R+ ++ G A +
Sbjct: 7 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 66
Query: 376 ISA---------PQDA-------VLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGK 419
+ + PQ +L+ QT + PD +Q +L+V ++ G ++GK
Sbjct: 67 VHSFIAEKVREIPQAMTKPEVVNILQPQTTMN---PDRAKQA---KLIVPNSTAGLIIGK 120
Query: 420 GGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFF 479
GG+ + + + SGA++++ Q P+ + E VV ++GE E V +A+ I +++
Sbjct: 121 GGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQED-- 175
Query: 480 RDAFPSINRPLNPTFLDQVSP 500
P + LN ++ + P
Sbjct: 176 ----PQSSSCLNISYANVAGP 192
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 591 VPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPK---PGATETVIIISGTPEQTHA 647
V + VP +LV I G+ G L + ++++ A+I I+ PG + I+G+P T A
Sbjct: 381 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQA 440
Query: 648 AQSLIQAFVMSE 659
AQ LI V E
Sbjct: 441 AQYLISQRVTYE 452
Score = 38.9 bits (89), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 589 RRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGAT--ETVIIISGTPEQTH 646
++ ++VP S +I G+ GA +K + + S A + ++ G E V+ +SG PEQ H
Sbjct: 103 KQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVH 162
Query: 647 AAQSLI 652
A S I
Sbjct: 163 KAVSAI 168
>gi|344283688|ref|XP_003413603.1| PREDICTED: poly(rC)-binding protein 1-like [Loxodonta africana]
Length = 438
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 115/275 (41%), Gaps = 63/275 (22%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T +S+ LRL+V +TQ G L+GKGGC IK
Sbjct: 147 TNAIFKAFAMIIDKL---EEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIK 203
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALK---LISHQLLDNSPRDH- 254
+I D LP +++ + I G +V + +K L+ + L SP+
Sbjct: 204 EIRESTGAQVQVAGDMLPN---STERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRV 260
Query: 255 ESIPGNPTGPSHPL-----PDHSVSSQGAPYAT--------GHRDVADIHLPMPPSIPKF 301
+IP P S P+ D + G P+AT + H P + K
Sbjct: 261 MTIPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKL 320
Query: 302 HE--------------SGVLDRPKPSPEI------------LTFRLLCHDERVGGVIGKG 335
++ +G SPE+ T L + +G +IG+
Sbjct: 321 NQVARQQSHFAMLHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQ 380
Query: 336 GAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPA 370
GA I ++Q +G IK+ V G+ R + I+G A
Sbjct: 381 GANINEIRQMSGAQIKIANPVEGSSGRQVTITGSA 415
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 77/142 (54%), Gaps = 11/142 (7%)
Query: 332 IGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIA 391
+G+ G ++ +++E+G I + E +R+I ++GP + + A + +++ I
Sbjct: 111 LGRKGTSVKRIREESGARINISEG--NCPERIITLTGPTNAIFKAFA--MIIDKLEEDIN 166
Query: 392 RAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCAS 448
++ ++ + V RL+V + Q G L+GKGG I E+R+ +GA +++ G D +P +
Sbjct: 167 SSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAG-DMLP---N 222
Query: 449 ENEEVVLINGEFEAVQEALFQI 470
E + I G ++V E + QI
Sbjct: 223 STERAITIAGVPQSVTECVKQI 244
Score = 45.8 bits (107), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 39/67 (58%)
Query: 593 VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLI 652
+ +P +L+ I G GA + +IRQ+S A+I I +P G++ + I+G+ AQ LI
Sbjct: 366 LTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLI 425
Query: 653 QAFVMSE 659
A + SE
Sbjct: 426 NARLSSE 432
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 5/69 (7%)
Query: 406 LLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQE 465
L + +N IGC++G+ G+ I E+R++SGA I+I P S +V I G ++
Sbjct: 366 LTIPNNLIGCIIGRQGANINEIRQMSGAQIKIAN----PVEGSSGRQVT-ITGSAASISL 420
Query: 466 ALFQITTRL 474
A + I RL
Sbjct: 421 AQYLINARL 429
>gi|410970837|ref|XP_003991883.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 2 [Felis catus]
Length = 493
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 110/484 (22%), Positives = 188/484 (38%), Gaps = 135/484 (27%)
Query: 14 DDNHTEPNGKEKSQKLAGDYSENQPSKSFPGG--------IMFRVLCPVSKIDGVIGKDG 65
D+ + P+ +++Q+ GD+S + + PGG R+L P + +IGK+G
Sbjct: 94 DEEVSSPSPPQRAQR--GDHSSREQGHA-PGGSSQARQIDFPLRILVPTQFVGAIIGKEG 150
Query: 66 EMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASV 125
+ I++ T + I R EN+G E V
Sbjct: 151 LTIKNITKQTQSRV-------------------------------DIHRKENSGAAEKPV 179
Query: 126 ADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSS 185
+ EG+ +A ++ E M + ET++A++
Sbjct: 180 TIHA-------TPEGT---------------SEACRMILEIMQKEADETKLAEE------ 211
Query: 186 KFVLRLLVLSTQVGCLLGKGGCVIKQID-----KLPTCALAS------DEVVQITGEVDT 234
L++L + VG L+GK G +K+I+ K+ +L + + + G V+
Sbjct: 212 -IPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEA 270
Query: 235 VRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPM 294
A I +L + D ++ + S P H Q P+
Sbjct: 271 CANAEVEIMKKLREAFENDMLAVNTHSGYFSSLYPPH----QFGPF-------------- 312
Query: 295 PPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVME 354
P H P EI+ L + VG +IGK GA I+ L + G IK+
Sbjct: 313 ----PHHHSY-------PEQEIVN--LFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAP 359
Query: 355 AVS-GTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPD------NREQTVMTRLL 407
A +R+++I+GP +A + Q RI + + E + +
Sbjct: 360 AEGPDVSERMVIITGPP----------EAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIR 409
Query: 408 VASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVL-INGEFEAVQEA 466
V S+ G ++GKGG + E++ L+ A + I+ +DQ P ENEEV++ I G F A Q A
Sbjct: 410 VPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVIVRIIGHFFASQTA 465
Query: 467 LFQI 470
+I
Sbjct: 466 QRKI 469
>gi|295660901|ref|XP_002791006.1| KH domain RNA-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226280933|gb|EEH36499.1| KH domain RNA-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 364
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 84/177 (47%), Gaps = 9/177 (5%)
Query: 316 ILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDR 375
+LT R + + G +IGK G + L+ ETG V + V G DR++ ++GP +
Sbjct: 44 MLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGPLQGAAK 103
Query: 376 ISAPQDAVLRV---QTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSG 432
A L Q + + +N V RLL++ NQ+G ++G+ G I ++ SG
Sbjct: 104 AYAIVAKSLLEGAPQLGMGGVVSNNGTHPV--RLLISHNQMGTIIGRQGLKIKYIQDASG 161
Query: 433 AYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRP 489
+ + K+ +P+ E +V + G E +++A+++I L + R + P
Sbjct: 162 VRM-VAQKEMLPQS---TERIVEVQGTPEGIEKAVWEIGKCLIDDWQRGTGTVLYNP 214
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 7/92 (7%)
Query: 392 RAIP---DNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCAS 448
R IP ++ E+ + + S+ +GC++G+GGS I+E+R+ SGA I I + P +
Sbjct: 270 RGIPLVTEDGEEVQTQNISIPSDMVGCIIGRGGSKISEIRRSSGARISIA---KAPHDET 326
Query: 449 ENEEVVLINGEFEAVQEALFQITTRLRHHFFR 480
E + I G A ++AL+ + L R
Sbjct: 327 -GERMFTIMGSAAANEKALYLLYENLEAEKMR 357
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 104/249 (41%), Gaps = 40/249 (16%)
Query: 158 KALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKLPT 217
KA +V + ++E P+ + + + V RLL+ Q+G ++G+ G IK I
Sbjct: 103 KAYAIVAKSLLEGAPQLGMGGVVSNNGTHPV-RLLISHNQMGTIIGRQGLKIKYIQDASG 161
Query: 218 CAL---------ASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSH-- 266
+ +++ +V++ G + + KA+ I L+D+ R ++ NP +
Sbjct: 162 VRMVAQKEMLPQSTERIVEVQGTPEGIEKAVWEIGKCLIDDWQRGTGTVLYNPAVRASVG 221
Query: 267 --PLPD---------------HSVSSQGAPYA--TGHRDVADIHLPMPPSIPKFHESGVL 307
P+ + ++ + GA ++ TG IP E G
Sbjct: 222 GAPINNSLGSGASSGGYGGRSYNRTGNGADFSDQTGGYSRRSNSDAANRGIPLVTEDG-- 279
Query: 308 DRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA-VSGTEDRLIVI 366
E+ T + + VG +IG+GG+ I +++ +G I + +A T +R+ I
Sbjct: 280 ------EEVQTQNISIPSDMVGCIIGRGGSKISEIRRSSGARISIAKAPHDETGERMFTI 333
Query: 367 SGPAHPDDR 375
G A +++
Sbjct: 334 MGSAAANEK 342
>gi|195037250|ref|XP_001990077.1| GH18435 [Drosophila grimshawi]
gi|193894273|gb|EDV93139.1| GH18435 [Drosophila grimshawi]
Length = 569
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 90/187 (48%), Gaps = 23/187 (12%)
Query: 329 GGVIGKGGAIIRSLKQETGCDIKVMEA---VSGTEDRLIVISGPAHP--------DDRIS 377
G +IGKGG I SL+++TG +K+ ++ GT +R+ +I+G D+I
Sbjct: 78 GAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSVEGIMTVVDFIMDKIR 137
Query: 378 APQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRI 437
D ++ I +E+ ++LV ++ G ++GKGG+ I ++++ SG+Y++I
Sbjct: 138 EKPDLTTKI---IDAESKQAQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQI 194
Query: 438 LGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQ 497
Q PK S E + I G+ E + A I +++ P LN ++ D
Sbjct: 195 ---SQKPKDVSLQERCITIIGDKENNKNACKMILSKIVED------PQSGTCLNVSYADV 245
Query: 498 VSPFPSF 504
P +F
Sbjct: 246 NGPVANF 252
>gi|47209955|emb|CAF90944.1| unnamed protein product [Tetraodon nigroviridis]
Length = 164
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 79/160 (49%), Gaps = 27/160 (16%)
Query: 324 HDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAV 383
H + VG +IGK G ++ +++E+G I + E S +R++ I+G +A+
Sbjct: 4 HLQEVGSIIGKKGETVKKIREESGARINISEGSS--PERIVTITGAT----------EAI 51
Query: 384 LRVQTRIAR-------AIPDNREQT----VMTRLLVASNQIGCLLGKGGSIIAEMRKLSG 432
R IA+ A N T V RL+ +Q G L+GKGGS I E+R+ +G
Sbjct: 52 FRTFAMIAQKFEEDINAAMSNSNVTSKPPVTLRLVFPGSQCGSLIGKGGSKIKEIRETTG 111
Query: 433 AYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITT 472
A +++ G D +P E V I+G +A+ + + I +
Sbjct: 112 AQVQVAG-DMLP---DSTERAVTISGTPQAITQCVRHICS 147
>gi|332215031|ref|XP_003256640.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 3 [Nomascus leucogenys]
Length = 556
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 110/484 (22%), Positives = 188/484 (38%), Gaps = 135/484 (27%)
Query: 14 DDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIM--------FRVLCPVSKIDGVIGKDG 65
D+ + P+ +++Q+ GD+S + + PGG R+L P + +IGK+G
Sbjct: 157 DEEVSSPSPPQRAQR--GDHSSREQGHA-PGGTSQARQIDFPLRILVPTQFVGAIIGKEG 213
Query: 66 EMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASV 125
+ I++ T + I R EN+G E V
Sbjct: 214 LTIKNITKQTQSRV-------------------------------DIHRKENSGAAEKPV 242
Query: 126 ADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSS 185
+ EG+ +A ++ E M + ET++A++
Sbjct: 243 TIHA-------TPEGT---------------SEACRMILEIMQKEADETKLAEE------ 274
Query: 186 KFVLRLLVLSTQVGCLLGKGGCVIKQID-----KLPTCALAS------DEVVQITGEVDT 234
L++L + VG L+GK G +K+I+ K+ +L + + + G V+
Sbjct: 275 -IPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEA 333
Query: 235 VRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPM 294
A I +L + D ++ + S P H Q P+
Sbjct: 334 CASAEIEIMKKLREAFENDMLAVNTHSGYFSSLYPHH----QFGPF-------------- 375
Query: 295 PPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVME 354
P H P EI+ L + VG +IGK GA I+ L + G IK+
Sbjct: 376 ----PHHHSY-------PEQEIVN--LFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAP 422
Query: 355 AVS-GTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPD------NREQTVMTRLL 407
A +R+++I+GP +A + Q RI + + E + +
Sbjct: 423 AEGPDVSERMVIITGPP----------EAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIR 472
Query: 408 VASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVL-INGEFEAVQEA 466
V S+ G ++GKGG + E++ L+ A + I+ +DQ P ENEEV++ I G F A Q A
Sbjct: 473 VPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVIVRIIGHFFASQTA 528
Query: 467 LFQI 470
+I
Sbjct: 529 QRKI 532
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 72/342 (21%), Positives = 126/342 (36%), Gaps = 96/342 (28%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV-MEAVSGTEDRLIVISGPAHPDDRIS 377
R+L + VG +IGK G I+++ ++T + + + SG ++ + I A P+
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIH--ATPEGTSE 253
Query: 378 APQDAVLRV------QTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLS 431
A + +L + +T++A IP ++L + +G L+GK G + ++ +
Sbjct: 254 ACR-MILEIMQKEADETKLAEEIP--------LKILAHNGLVGRLIGKEGRNLKKIEHET 304
Query: 432 GAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLN 491
G I I + E + + G EA A +I +LR F D ++N
Sbjct: 305 GTKITISSLQDL--SIYNPERTITVKGTVEACASAEIEIMKKLREAFENDML-AVN---- 357
Query: 492 PTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHI 551
+ G +S S +PH F HH
Sbjct: 358 -------------------THSGYFS-------------------SLYPHHQFGPFPHH- 378
Query: 552 HRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACL 611
+P+ V + +P V I G+ GA +
Sbjct: 379 --------------------------HSYPE-----QEIVNLFIPTQAVGAIIGKKGAHI 407
Query: 612 KQIRQISDAKITITDPK-PGATETVIIISGTPEQTHAAQSLI 652
KQ+ + + A I I + P +E ++II+G PE AQ I
Sbjct: 408 KQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI 449
>gi|281360685|ref|NP_001162717.1| IGF-II mRNA-binding protein, isoform J [Drosophila melanogaster]
gi|272506050|gb|ACZ95252.1| IGF-II mRNA-binding protein, isoform J [Drosophila melanogaster]
gi|383873394|gb|AFH55503.1| FI20063p1 [Drosophila melanogaster]
Length = 580
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 149/332 (44%), Gaps = 40/332 (12%)
Query: 165 ERMVEVEPETEVADQENTKS---SKFVLRLLVLSTQVGCLLGKGGCVIKQI----DKLPT 217
+R++EV + ++ + S S+ L++L + +G ++GK G IK+I D T
Sbjct: 147 KRILEVMQQEAISTNKGELSPECSEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKIT 206
Query: 218 CALASD-------EVVQITGEVDTVRKALKLISHQLLDNSPRDHESI-PGNPTGPS-HPL 268
+ +D ++ + G ++ + +A IS +L + D +++ P + P HP+
Sbjct: 207 VSSINDINSFNLERIITVKGLIENMSRAENQISTKLRQSYENDLQAMAPQSLMFPGLHPM 266
Query: 269 PDHSVSSQGAPYATGHRDVADIHLPMP-PSIPKFHES----GVLDRPKPSPEILTFRLLC 323
S G + T MP PS F S V+ P+ T L
Sbjct: 267 AMMSTPGNGMVFNTS----------MPFPSCQSFAMSKTPASVVPPVFPNDLQETTYLYI 316
Query: 324 HDERVGGVIGKGGAIIRSLKQETGCDIKVM-----EAVSGTEDRLIVISGPAHPDDRISA 378
+ VG +IG G+ IRS+ + + +K+ + + +R + I G P+ + A
Sbjct: 317 PNNAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGT--PEGQWKA 374
Query: 379 PQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRIL 438
+++ D+ TV LLVAS+Q+G ++GKGG + E+++++G+ I++
Sbjct: 375 QYMIFEKMREEGFMCGTDDVRLTV--ELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLP 432
Query: 439 GKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
P + E V I G F +VQ A +I
Sbjct: 433 EHALAPPSGGDEETPVHIIGLFYSVQSAQRRI 464
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 137/348 (39%), Gaps = 70/348 (20%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRIS 377
R+L E VG +IG+ G+ IR++ Q++ + V + G+ ++ I I G +P++ +
Sbjct: 87 LRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENVGSLEKSITIYG--NPENCTN 144
Query: 378 APQDAVLRVQTRIARAIPDNREQT------VMTRLLVASNQIGCLLGKGGSIIAEMRKLS 431
A + +L V + AI N+ + + ++L +N IG ++GK G+ I + + +
Sbjct: 145 ACKR-ILEVMQQ--EAISTNKGELSPECSEICLKILAHNNLIGRIIGKSGNTIKRIMQDT 201
Query: 432 GAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLN 491
I + + I + E ++ + G E + A QI+T+LR + D + +
Sbjct: 202 DTKITVSSINDI--NSFNLERIITVKGLIENMSRAENQISTKLRQSYENDL-----QAMA 254
Query: 492 PTFLDQVSPFPSFIGRRELSPP--GMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMH 549
P L FP +S P GM N F + P S P
Sbjct: 255 PQSL----MFPGLHPMAMMSTPGNGMVFNTSMPFPSCQSFAMSKTPASVVP--------- 301
Query: 550 HIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGA 609
P P L E + +P + V I G G+
Sbjct: 302 ---------------PVFPNDLQET----------------TYLYIPNNAVGAIIGTRGS 330
Query: 610 CLKQIRQISDAKITIT-----DPKPGATETVIIISGTPEQTHAAQSLI 652
++ I + S+A + I P TE + I GTPE AQ +I
Sbjct: 331 HIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGTPEGQWKAQYMI 378
>gi|401838485|gb|EJT42099.1| PBP2-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 416
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 80/361 (22%), Positives = 141/361 (39%), Gaps = 52/361 (14%)
Query: 314 PEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPD 373
P + R+LC + ++G GA I +K ET I V + G +R+I + G
Sbjct: 67 PSHVHLRMLCLVKHASLIVGHKGATISRIKSETSARINVSNNIRGVPERIIYVRGTC--- 123
Query: 374 DRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
D ++ ++R + + V LL+ + +GC++GK GS + E+ LS A
Sbjct: 124 DDVAKAYGMIVRALLEEHENESEEEDIEVSINLLIPHHLMGCIIGKRGSRLREIEDLSAA 183
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPT 493
+ +Q+ N+ ++ ING +A+ A F + L + F+ P + L +
Sbjct: 184 KL-FASPNQL---LLSNDRILTINGVPDAIHIATFYVGQTLLN--FQIESPQ--KKLKRS 235
Query: 494 FLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHR 553
Q + F S + S ++ +H D + P F
Sbjct: 236 IFYQPTQFNSVLLDHSQSNAVLHQR-NHQYHPNDKLLSCRPNRKF--------------- 279
Query: 554 PGMPPHMPDMKPWGPQ-GLMEVGGPMGF-PDFVGPPHRRV--PVV--------------- 594
+ + M P PQ V F P+FV P R + PV+
Sbjct: 280 -SVSSTLLSMAP--PQYTTASVANATAFHPNFVIPNVRILDAPVIDQGPSNHLSMNLFQQ 336
Query: 595 ---VPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSL 651
+ + V + G+DG + +++ + I + D G++E + I GT + AA L
Sbjct: 337 EIFIDENFVGNVIGKDGKHINSVKESTGCSIIVQDSVEGSSERRLSIRGTFMASQAAIML 396
Query: 652 I 652
I
Sbjct: 397 I 397
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 101/255 (39%), Gaps = 60/255 (23%)
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQIDKLPTCAL---------ASDEVVQITGEVDTVRKAL 239
+ LL+ +GC++GK G +++I+ L L ++D ++ I G D + A
Sbjct: 154 INLLIPHHLMGCIIGKRGSRLREIEDLSAAKLFASPNQLLLSNDRILTINGVPDAIHIAT 213
Query: 240 KLISHQLLD---NSPRDH--ESIPGNPTGPSHPLPDHSVSSQGAPYATGHR--------- 285
+ LL+ SP+ SI PT + L DHS S + H+
Sbjct: 214 FYVGQTLLNFQIESPQKKLKRSIFYQPTQFNSVLLDHS-QSNAVLHQRNHQYHPNDKLLS 272
Query: 286 -------DVADIHLPMPP---------SIPKFHESGV------LDRP--------KPSPE 315
V+ L M P + FH + V LD P S
Sbjct: 273 CRPNRKFSVSSTLLSMAPPQYTTASVANATAFHPNFVIPNVRILDAPVIDQGPSNHLSMN 332
Query: 316 ILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDR 375
+ + + VG VIGK G I S+K+ TGC I V ++V G+ +R + I G
Sbjct: 333 LFQQEIFIDENFVGNVIGKDGKHINSVKESTGCSIIVQDSVEGSSERRLSIRGT------ 386
Query: 376 ISAPQDAVLRVQTRI 390
A Q A++ + +I
Sbjct: 387 FMASQAAIMLISNKI 401
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 30 AGDYSENQP--SKSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSG 87
A D+S+N+ + + P + R+LC V ++G G +S+I +T I V + G
Sbjct: 52 AEDHSDNERDFTDNLPSHVHLRMLCLVKHASLIVGHKGATISRIKSETSARINVSNNIRG 111
Query: 88 SDERLVVIEAS 98
ER++ + +
Sbjct: 112 VPERIIYVRGT 122
>gi|388855866|emb|CCF50441.1| related to poly(rC)-binding protein 3 [Ustilago hordei]
Length = 440
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 81/169 (47%), Gaps = 29/169 (17%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
L R L + G +IGKGGA + L+++TG V + V G DR++ ++G +
Sbjct: 43 LLVRALVSTKEAGIIIGKGGANVAELREQTGVKAGVSKVVPGVHDRVLSVTGT------L 96
Query: 377 SAPQDAVLRVQTRIARAIPDN---------------REQTVMTRLLVASNQIGCLLGKGG 421
DA IA+ I +N QT RLL++ N +G ++G+ G
Sbjct: 97 VGISDAF----ALIAKTILENPLNAPVQADGTPAQAAAQTSSVRLLISHNLMGTVIGRQG 152
Query: 422 SIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
I ++ LSGA + + K+ +P+ E VV + G +A++ A+ QI
Sbjct: 153 LKIKHIQDLSGARM-VASKEMLPQS---TERVVEVQGSVDAIRVAVHQI 197
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 410 SNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQ 469
S+ +GC++GKGGS I E+R+LSG+ I I ++P + E + I G EA ++ALF
Sbjct: 352 SDMVGCIIGKGGSKITEIRRLSGSRISIA---KVPHDET-GERMFTIQGTPEANEKALFL 407
Query: 470 ITTRL 474
+ +L
Sbjct: 408 LYNQL 412
>gi|226289821|gb|EEH45305.1| KH domain RNA-binding protein [Paracoccidioides brasiliensis Pb18]
Length = 364
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 84/177 (47%), Gaps = 9/177 (5%)
Query: 316 ILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDR 375
+LT R + + G +IGK G + L+ ETG V + V G DR++ ++GP +
Sbjct: 44 MLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGPLQGAAK 103
Query: 376 ISAPQDAVLRV---QTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSG 432
A L Q + + +N V RLL++ NQ+G ++G+ G I ++ SG
Sbjct: 104 AYAIVAKSLLEGAPQLGMGGVVSNNGTHPV--RLLISHNQMGTIIGRQGLKIKYIQDASG 161
Query: 433 AYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRP 489
+ + K+ +P+ E +V + G E +++A+++I L + R + P
Sbjct: 162 VRM-VAQKEMLPQST---ERIVEVQGTPEGIEKAVWEIGKCLIDDWQRGTGTVLYNP 214
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 7/92 (7%)
Query: 392 RAIP---DNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCAS 448
R IP ++ E+ + + S+ +GC++G+GGS I+E+R++SGA I I + P +
Sbjct: 270 RGIPLVTEDGEEVQTQNISIPSDMVGCIIGRGGSKISEIRRVSGARISIA---KAPHDET 326
Query: 449 ENEEVVLINGEFEAVQEALFQITTRLRHHFFR 480
E + I G A ++AL+ + L R
Sbjct: 327 -GERMFTIMGSAAANEKALYLLYENLEAEKMR 357
Score = 39.7 bits (91), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 104/249 (41%), Gaps = 40/249 (16%)
Query: 158 KALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKLPT 217
KA +V + ++E P+ + + + V RLL+ Q+G ++G+ G IK I
Sbjct: 103 KAYAIVAKSLLEGAPQLGMGGVVSNNGTHPV-RLLISHNQMGTIIGRQGLKIKYIQDASG 161
Query: 218 CAL---------ASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSH-- 266
+ +++ +V++ G + + KA+ I L+D+ R ++ NP +
Sbjct: 162 VRMVAQKEMLPQSTERIVEVQGTPEGIEKAVWEIGKCLIDDWQRGTGTVLYNPAVRASVG 221
Query: 267 --PLPD---------------HSVSSQGAPYA--TGHRDVADIHLPMPPSIPKFHESGVL 307
P+ + ++ + GA ++ TG IP E G
Sbjct: 222 GAPINNSLGSGGSSGGYGGRSYNRTGNGADFSDQTGGYSRRSNSDAANRGIPLVTEDG-- 279
Query: 308 DRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA-VSGTEDRLIVI 366
E+ T + + VG +IG+GG+ I +++ +G I + +A T +R+ I
Sbjct: 280 ------EEVQTQNISIPSDMVGCIIGRGGSKISEIRRVSGARISIAKAPHDETGERMFTI 333
Query: 367 SGPAHPDDR 375
G A +++
Sbjct: 334 MGSAAANEK 342
>gi|195330414|ref|XP_002031899.1| GM23807 [Drosophila sechellia]
gi|194120842|gb|EDW42885.1| GM23807 [Drosophila sechellia]
Length = 572
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 90/184 (48%), Gaps = 17/184 (9%)
Query: 329 GGVIGKGGAIIRSLKQETGCDIKVMEA---VSGTEDRLIVISGPAHPDDRISAPQDAVLR 385
G +IGKGG I SL+++TG +K+ ++ GT +R+ +I+G + +R
Sbjct: 78 GAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMVVMEFIMDKIR 137
Query: 386 VQTRIARAIPD-----NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGK 440
+ + I D +E+ ++LV ++ G ++GKGG+ I ++++ SG+Y++I
Sbjct: 138 EKPDLTNKIVDVESKQTQERDRQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQI--- 194
Query: 441 DQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSP 500
Q PK S E + I G+ E + A I +++ P LN ++ D P
Sbjct: 195 SQKPKDVSLQERCITIIGDKENNKNACKMILSKIVED------PQSGTCLNVSYADVSGP 248
Query: 501 FPSF 504
+F
Sbjct: 249 VANF 252
>gi|195131533|ref|XP_002010205.1| GI15803 [Drosophila mojavensis]
gi|193908655|gb|EDW07522.1| GI15803 [Drosophila mojavensis]
Length = 596
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 101/405 (24%), Positives = 176/405 (43%), Gaps = 57/405 (14%)
Query: 94 VIEASDNKKETSENLEASIERSENNGRE--EASVADESDNKKEDSVN-EGSVLMDGLNSE 150
I + D +TSE + A I R R + S A ++KE+ + E S+ + G N E
Sbjct: 73 AISSKDQNTQTSEMVGAIIGRQGTTIRTITQQSRARVDVHRKENVGSLEKSITIYG-NPE 131
Query: 151 KETSKVQKALLLVFERMVEVEPETEVADQE--NTKSSKFVLRLLVLSTQVGCLLGKGGCV 208
T+ ++ L EV QE +T + L++L + +G ++GK G
Sbjct: 132 NCTNACKRIL--------------EVMQQEALSTNKGEICLKILAHNNLIGRIIGKSGNT 177
Query: 209 IKQI----DKLPTCALASD-------EVVQITGEVDTVRKALKLISHQLLDNSPRDHESI 257
IK+I D T + +D ++ + G ++ + +A IS +L + D +++
Sbjct: 178 IKRIMQDTDTKITVSSINDINSFNLERIITVKGLIENMSRAENQISTKLRQSYENDLQAM 237
Query: 258 -PGNPTGPS-HPLPDHSVSSQGAPYATGHRDVADIHLPMP-PSIPKFHES----GVLDRP 310
P + P HP+ S G + T MP PS F S V+
Sbjct: 238 APQSLMFPGLHPMAMMSTPGNGMVFNTS----------MPFPSCQSFAMSKTPASVVPPA 287
Query: 311 KPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVM-----EAVSGTEDRLIV 365
P+ T L + VG +IG G+ IRS+ + + +K+ + + +R +
Sbjct: 288 FPNDMQETTFLYIPNNAVGAIIGTKGSHIRSIMRFSSASLKIAPLDADKPLDQQTERKVT 347
Query: 366 ISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIA 425
I G P+ + A +++ D+ TV LLVAS+Q+G ++GKGG +
Sbjct: 348 IVGT--PEGQWKAQYMIFEKMREEGFMCGTDDVRLTV--ELLVASSQVGRIIGKGGQNVR 403
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
E+++++G+ I++ P + E V I G F +VQ A +I
Sbjct: 404 ELQRVTGSVIKLPEHALAPPSGGDEETPVHIIGPFYSVQSAQRRI 448
>gi|460789|emb|CAA51267.1| transformation upregulated nuclear protein [Homo sapiens]
Length = 464
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 96/437 (21%), Positives = 155/437 (35%), Gaps = 101/437 (23%)
Query: 307 LDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVI 366
R + + E++ R+L + G VIGKGG I++L+ + + V ++ SG E R++ I
Sbjct: 33 FKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDS-SGPE-RILSI 90
Query: 367 SGPAH-----------------------PDDRISAPQDAVLRVQTRIARAIPDNREQTVM 403
S ++ DAV + + + + E
Sbjct: 91 SADIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCE---- 146
Query: 404 TRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAV 463
RLL+ + G ++G G+ I E+R+ + I++ + C + VVLI G+ + V
Sbjct: 147 LRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQE----CCPHSTDRVVLIGGKPDRV 202
Query: 464 QEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSPFPSF---IGRRELSPPGMYSNFG 520
E + I + + +P +P F D+ + F R P G
Sbjct: 203 VECIKIILDLISESPIKGR----AQPYDPNFYDETYDYGGFTMMFDDRRGRPVGFPMRGR 258
Query: 521 PSFHKF-DAVGGPPPPGSFHPHDDHSAF-------------------------------- 547
F + GG P P S +DD S
Sbjct: 259 GGFDRMPPGRGGRPMPPSRRDYDDMSPRRGPPPPPPGRGGRGGSRARNLPLPPPPPPRGG 318
Query: 548 -MHHIHRPGMPPHMPD--------------MKPWGPQGLMEVGGPMGFPDF--------- 583
+ R G P D + W P P G +
Sbjct: 319 DLMAYDRRGRPGDRYDGMVGFSADETWDSAIDTWSPSEWQMAYEPQGGSGYDYSYAGGRG 378
Query: 584 ----VGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIIS 639
+G P V +P+ L I G+ G +KQIR S A I I +P G+ + +I I+
Sbjct: 379 SYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITIT 438
Query: 640 GTPEQTHAAQSLIQAFV 656
GT +Q AQ L+Q V
Sbjct: 439 GTQDQIQNAQYLLQNSV 455
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 38/63 (60%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
I +V P +IGK G+ + QI ++G +I+++E + GS++R++ I + ++ + +
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNA 447
Query: 106 ENL 108
+ L
Sbjct: 448 QYL 450
>gi|242002844|ref|XP_002436065.1| RNA-binding protein Nova-1, putative [Ixodes scapularis]
gi|215499401|gb|EEC08895.1| RNA-binding protein Nova-1, putative [Ixodes scapularis]
Length = 474
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 83/167 (49%), Gaps = 16/167 (9%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA---VSGTEDRLIVISGPAHP--- 372
F++L G +IGKGG I L++E G +K+ ++ GT +R+ +I+G
Sbjct: 52 FKILVPAVAAGAIIGKGGETIALLQKEAGARVKMSKSNDFYPGTTERVCLITGSVEGVLR 111
Query: 373 -----DDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEM 427
++I D ++ P RE+ V ++LV ++ G ++GKGGS I ++
Sbjct: 112 IHEFIMEKIKEKPDPTAKIAIDFDHKQPAEREKQV--KILVPNSTAGMIIGKGGSYIKQI 169
Query: 428 RKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRL 474
++ SGAY++I Q K + E + + GE E ++A I ++
Sbjct: 170 KEESGAYVQI---SQKSKDHALAERCITVIGELENNKKACHMILAKI 213
>gi|154275678|ref|XP_001538690.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150415130|gb|EDN10492.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|225556762|gb|EEH05050.1| KH domain RNA-binding protein [Ajellomyces capsulatus G186AR]
Length = 363
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/339 (21%), Positives = 134/339 (39%), Gaps = 39/339 (11%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT R + + G +IGK G + L+ ETG V + V G DR++ ++GP +
Sbjct: 44 LTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGPLQGTAKA 103
Query: 377 SA-PQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYI 435
A +L ++ + T RLL++ NQ+G ++G+ G I ++ SG +
Sbjct: 104 YAIVAKGLLEGAPQLGMGGVASNNGTHPVRLLISHNQMGTIIGRQGLKIKYIQDASGVRM 163
Query: 436 RILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFL 495
+ K+ +P+ E +V + G E +++A+++I L + R + NP
Sbjct: 164 -VAQKEMLPQS---TERIVEVQGTPEGIEKAVWEIGKCLIDDWQRGTGTVL---YNPAVR 216
Query: 496 DQVSPFPSFIGRRELSPPGMYSNFGPSFHKF-DAVGGPPPPGSFHPHDDHSAFMHHIHRP 554
V P + G Y G S+++ + G ++ + A
Sbjct: 217 ASVGGGPLNNSLGSGASTGGYG--GRSYNRTGNGADFSDQTGGYNRRSNSDAASR----- 269
Query: 555 GMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQI 614
G+P D G + + +P +V I G G+ + +I
Sbjct: 270 GIPLVTED----------------------GEEVQTQNISIPSDMVGCIIGRGGSKISEI 307
Query: 615 RQISDAKITITD-PKPGATETVIIISGTPEQTHAAQSLI 652
R+ S A+I+I P E + I G+ A L+
Sbjct: 308 RRSSGARISIAKAPHDETGERMFTIMGSAAANEKALYLL 346
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 104/249 (41%), Gaps = 40/249 (16%)
Query: 158 KALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKLPT 217
KA +V + ++E P+ + + + V RLL+ Q+G ++G+ G IK I
Sbjct: 102 KAYAIVAKGLLEGAPQLGMGGVASNNGTHPV-RLLISHNQMGTIIGRQGLKIKYIQDASG 160
Query: 218 CAL---------ASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPT------ 262
+ +++ +V++ G + + KA+ I L+D+ R ++ NP
Sbjct: 161 VRMVAQKEMLPQSTERIVEVQGTPEGIEKAVWEIGKCLIDDWQRGTGTVLYNPAVRASVG 220
Query: 263 -GP------------SHPLPDHSVSSQGAPYA--TGHRDVADIHLPMPPSIPKFHESGVL 307
GP + ++ + GA ++ TG + IP E G
Sbjct: 221 GGPLNNSLGSGASTGGYGGRSYNRTGNGADFSDQTGGYNRRSNSDAASRGIPLVTEDG-- 278
Query: 308 DRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA-VSGTEDRLIVI 366
E+ T + + VG +IG+GG+ I +++ +G I + +A T +R+ I
Sbjct: 279 ------EEVQTQNISIPSDMVGCIIGRGGSKISEIRRSSGARISIAKAPHDETGERMFTI 332
Query: 367 SGPAHPDDR 375
G A +++
Sbjct: 333 MGSAAANEK 341
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 49/93 (52%), Gaps = 7/93 (7%)
Query: 391 ARAIP---DNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCA 447
+R IP ++ E+ + + S+ +GC++G+GGS I+E+R+ SGA I I + P
Sbjct: 268 SRGIPLVTEDGEEVQTQNISIPSDMVGCIIGRGGSKISEIRRSSGARISIA---KAPHDE 324
Query: 448 SENEEVVLINGEFEAVQEALFQITTRLRHHFFR 480
+ E + I G A ++AL+ + L R
Sbjct: 325 T-GERMFTIMGSAAANEKALYLLYENLEAEKMR 356
>gi|281341834|gb|EFB17418.1| hypothetical protein PANDA_012445 [Ailuropoda melanoleuca]
Length = 320
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 118/282 (41%), Gaps = 73/282 (25%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T +S+ LRL+V ++Q G L+GKGGC IK
Sbjct: 35 TNAIFKAFAMIIDKL---EEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 91
Query: 211 QI-----------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPR------- 252
+I D LP +++ + I G ++ + +K I +L++ P+
Sbjct: 92 EIREVGAQVQVAGDMLPN---STERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYR 148
Query: 253 ---------------------DHESIPG-------NPTGPSHPLPDHSVSSQGAPYATGH 284
D S P NP PL +++ Q YA
Sbjct: 149 PKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQ---YAIPQ 205
Query: 285 RDVADIH-LPMPPS-IPKFH-ESGVLDRPKPSPEILTF-------------RLLCHDERV 328
D+ +H L M S P H +G SPE+ + L ++ +
Sbjct: 206 PDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLI 265
Query: 329 GGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPA 370
G +IG+ GA I ++Q +G IK+ V G+ DR + I+G A
Sbjct: 266 GCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSA 307
Score = 45.8 bits (107), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 76/138 (55%), Gaps = 12/138 (8%)
Query: 336 GAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIP 395
G ++ +++E+G I + E +R+I ++GP + + A + +++ I+ ++
Sbjct: 3 GESVKKMREESGARINISEG--NCPERIITLAGPTNAIFKAFA--MIIDKLEEDISSSMT 58
Query: 396 DNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEE 452
++ + V RL+V ++Q G L+GKGG I E+R++ GA +++ G D +P + E
Sbjct: 59 NSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIREV-GAQVQVAG-DMLP---NSTER 113
Query: 453 VVLINGEFEAVQEALFQI 470
+ I G +++ E + QI
Sbjct: 114 AITIAGIPQSIIECVKQI 131
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%)
Query: 593 VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLI 652
+ +P L+ I G GA + +IRQ+S A+I I +P G+T+ + I+G+ AQ LI
Sbjct: 258 LTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLI 317
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 396 DNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVL 455
D QT L + ++ IGC++G+ G+ I E+R++SGA I+I P S + +V
Sbjct: 248 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN----PVEGSTDRQVT- 302
Query: 456 INGEFEAVQEALFQITTR 473
I G ++ A + I R
Sbjct: 303 ITGSAASISLAQYLINVR 320
>gi|392337608|ref|XP_001075246.3| PREDICTED: RNA-binding protein Nova-2 [Rattus norvegicus]
Length = 560
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 89/177 (50%), Gaps = 28/177 (15%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA---VSGTEDRLIVISGPAHPDDR 375
++L G +IGKGG I L++ETG IK+ ++ GT +R+ ++ G A +
Sbjct: 120 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 179
Query: 376 ISA---------PQDA-------VLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGK 419
+ PQ +L+ QT + PD +Q +L+V ++ G ++GK
Sbjct: 180 AHSFIAEKVREIPQAMTKPEVVNILQPQTTMN---PDRAKQA---KLIVPNSTAGLIIGK 233
Query: 420 GGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRH 476
GG+ + + + SGA++++ Q P+ + E VV ++GE E V +A+ I +++
Sbjct: 234 GGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQE 287
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 591 VPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPK---PGATETVIIISGTPEQTHA 647
V + VP +LV I G+ G L + ++++ A+I I+ PG + I+G+P T A
Sbjct: 477 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQA 536
Query: 648 AQSLIQAFVMSE 659
AQ LI V E
Sbjct: 537 AQYLISQRVTYE 548
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 403 MTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQ-IPKCASENEEVVLINGEFE 461
+ + V N +G +LGKGG + E ++L+GA I+I K + +P + N V I G
Sbjct: 476 LVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLP--GTRNRRVT-ITGSPA 532
Query: 462 AVQEALFQITTRLRHH 477
A Q A + I+ R+ +
Sbjct: 533 ATQAAQYLISQRVTYE 548
Score = 38.9 bits (89), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Query: 392 RAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRI-LGKDQIPKCASEN 450
+ I E ++L+ S G ++GKGG I +++K +GA I++ KD P
Sbjct: 108 KRINTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYP---GTT 164
Query: 451 EEVVLINGEFEAVQEALFQITTRLRH 476
E V L+ G EA+ A I ++R
Sbjct: 165 ERVCLVQGTAEALNAAHSFIAEKVRE 190
>gi|195658007|gb|ACG48471.1| hypothetical protein [Zea mays]
Length = 157
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 49/83 (59%)
Query: 576 GPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETV 635
GP+ + V P V++P + + + G +G+ +++I ++S A IT+ DPK G +
Sbjct: 70 GPVAIENQVATPTGTTEVIIPCNYIGFVCGNNGSEIEEIEKMSGASITVHDPKAGDANSK 129
Query: 636 IIISGTPEQTHAAQSLIQAFVMS 658
++I G PE+T AQSLI AF+
Sbjct: 130 VVICGDPEETKKAQSLIHAFIFC 152
>gi|148691147|gb|EDL23094.1| neuro-oncological ventral antigen 2 [Mus musculus]
Length = 411
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 98/201 (48%), Gaps = 34/201 (16%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA---VSGTEDRLIVISGPAHPDDR 375
++L G +IGKGG I L++ETG IK+ ++ GT +R+ ++ G A +
Sbjct: 6 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 65
Query: 376 ISA---------PQDA-------VLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGK 419
+ + PQ +L+ QT + PD +Q +L+V ++ G ++GK
Sbjct: 66 VHSFIAEKVREIPQAMTKPEVVNILQPQTTMN---PDRAKQA---KLIVPNSTAGLIIGK 119
Query: 420 GGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFF 479
GG+ + + + SGA++++ Q P+ + E VV ++GE E V +A+ I +++
Sbjct: 120 GGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQED-- 174
Query: 480 RDAFPSINRPLNPTFLDQVSP 500
P + LN ++ + P
Sbjct: 175 ----PQSSSCLNISYANVAGP 191
Score = 38.9 bits (89), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 589 RRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGAT--ETVIIISGTPEQTH 646
++ ++VP S +I G+ GA +K + + S A + ++ G E V+ +SG PEQ H
Sbjct: 102 KQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVH 161
Query: 647 AAQSLI 652
A S I
Sbjct: 162 KAVSAI 167
>gi|431838851|gb|ELK00780.1| Insulin-like growth factor 2 mRNA-binding protein 2 [Pteropus
alecto]
Length = 820
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 113/508 (22%), Positives = 199/508 (39%), Gaps = 140/508 (27%)
Query: 14 DDNHTEPNGKEKSQKLAGDYSENQPSKSFPGG--------IMFRVLCPVSKIDGVIGKDG 65
D+ + P+ +++Q+ GD+S + + PGG R+L P + +IGK+G
Sbjct: 378 DEEVSSPSPPQRAQR--GDHSSREQGHA-PGGSSQARQIDFPLRILVPTQFVGAIIGKEG 434
Query: 66 EMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASV 125
+ I++ T + I R EN+G E V
Sbjct: 435 LTIKNITKQTQSRV-------------------------------DIHRKENSGAAEKPV 463
Query: 126 ADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSS 185
+ EG+ +A ++ E M + ET++A++
Sbjct: 464 TIHA-------TPEGT---------------SEACRMILEIMQKEADETKLAEE------ 495
Query: 186 KFVLRLLVLSTQVGCLLGKGGCVIKQID-----KLPTCALAS------DEVVQITGEVDT 234
L++L + VG L+GK G +K+I+ K+ +L + + + G V+
Sbjct: 496 -IPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEA 554
Query: 235 VRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGA---------------- 278
A I +L + D ++ ++ +P ++S+ G
Sbjct: 555 CASAEIEIMKKLREAFENDMLAV----NQQANLIPGLNLSALGIFSTGLSVLPPPAGPRG 610
Query: 279 --------PYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGG 330
P+AT + ++ P S H S P EI+ L + VG
Sbjct: 611 APPAPPYHPFATHSGYFSSLYPPHQFSPFPHHHS------YPEQEIVN--LFIPTQAVGA 662
Query: 331 VIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRISAPQDAVLRVQTR 389
+IGK GA I+ L + G IK+ A +R+++I+GP +A + Q R
Sbjct: 663 IIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPP----------EAQFKAQGR 712
Query: 390 IARAIPD------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQI 443
I + + E + + V S+ G ++GKGG + E++ L+ A + I+ +DQ
Sbjct: 713 IFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQT 771
Query: 444 PKCASENEEVVL-INGEFEAVQEALFQI 470
P ENEEV++ I G F A Q A +I
Sbjct: 772 P---DENEEVIVRIIGHFFASQTAQRKI 796
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 141/343 (41%), Gaps = 55/343 (16%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV-MEAVSGTEDRLIVISGPAHPDDRIS 377
R+L + VG +IGK G I+++ ++T + + + SG ++ + I A P+
Sbjct: 417 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIH--ATPEGTSE 474
Query: 378 APQDAVLRV------QTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLS 431
A + +L + +T++A IP ++L + +G L+GK G + ++ +
Sbjct: 475 ACR-MILEIMQKEADETKLAEEIP--------LKILAHNGLVGRLIGKEGRNLKKIEHET 525
Query: 432 GAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLN 491
G I I + E + + G EA A +I +LR F D ++N+ N
Sbjct: 526 GTKITISSLQDL--SIYNPERTITVKGTVEACASAEIEIMKKLREAFENDML-AVNQQAN 582
Query: 492 PTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHI 551
I LS G++S G PP +HP HS + +
Sbjct: 583 ------------LIPGLNLSALGIFSTGLSVLPPPAGPRGAPPAPPYHPFATHSGYFSSL 630
Query: 552 HRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRR-VPVVVPRSLVPIIQGEDGAC 610
+ PPH + P FP P + V + +P V I G+ GA
Sbjct: 631 Y----PPHQ-----FSP-----------FPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAH 670
Query: 611 LKQIRQISDAKITITDPK-PGATETVIIISGTPEQTHAAQSLI 652
+KQ+ + + A I I + P +E ++II+G PE AQ I
Sbjct: 671 IKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI 713
>gi|431909188|gb|ELK12778.1| RNA-binding protein Nova-2 [Pteropus alecto]
Length = 334
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 98/202 (48%), Gaps = 34/202 (16%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA---VSGTEDRLIVISGPAHPDDR 375
++L G +IGKGG I L++ETG IK+ ++ GT +R+ ++ G A +
Sbjct: 35 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 94
Query: 376 ISA---------PQDA-------VLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGK 419
+ + PQ +L+ QT + PD +Q +L+V ++ G ++GK
Sbjct: 95 VHSFIAEKVREIPQAMTKPEVVNILQPQTTMN---PDRAKQA---KLIVPNSTAGLIIGK 148
Query: 420 GGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFF 479
GG+ + + + SGA++++ Q P+ + E VV ++GE E V +A+ I +++
Sbjct: 149 GGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQED-- 203
Query: 480 RDAFPSINRPLNPTFLDQVSPF 501
P + LN ++ + P
Sbjct: 204 ----PQSSSCLNISYANVAGPV 221
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 77/359 (21%), Positives = 142/359 (39%), Gaps = 92/359 (25%)
Query: 165 ERMVEVEPETEVADQENT-KSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKLPTCAL--- 220
+R +E PE + NT + ++ L++L+ S G ++GKGG I Q+ K +
Sbjct: 10 KRPLETPPEVVCTKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLS 69
Query: 221 --------ASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHS 272
++ V + G + + I+ ++ + IP T P
Sbjct: 70 KSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVRE--------IPQAMTKP-------- 113
Query: 273 VSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVI 332
+V +I P P DR K + +L+ + G +I
Sbjct: 114 -------------EVVNILQPQTTMNP--------DRAKQA------KLIVPNSTAGLII 146
Query: 333 GKGGAIIRSLKQETGCDIKVMEAVSGT--EDRLIVISG-PAHPDDRISA--------PQD 381
GKGGA ++++ +++G +++ + G ++R++ +SG P +SA PQ
Sbjct: 147 GKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQS 206
Query: 382 A------VLRVQTRIARAIPDNREQTV----------------MTRLLVASNQIGCLLGK 419
+ V +A + P + + V N +G +LGK
Sbjct: 207 SSCLNISYANVAGPVANSNPTAAAGAAGGFLTAEKLAAESAKELVEIAVPENLVGAILGK 266
Query: 420 GGSIIAEMRKLSGAYIRILGKDQ-IPKCASENEEVVLINGEFEAVQEALFQITTRLRHH 477
GG + E ++L+GA I+I K + +P + N V I G A Q A + I+ R+ +
Sbjct: 267 GGKTLVEYQELTGARIQISKKGEFLP--GTRNRRVT-ITGSPAATQAAQYLISQRVTYE 322
Score = 40.0 bits (92), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 591 VPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPK---PGATETVIIISGTPEQTHA 647
V + VP +LV I G+ G L + ++++ A+I I+ PG + I+G+P T A
Sbjct: 251 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQA 310
Query: 648 AQSLIQAFVMSE 659
AQ LI V E
Sbjct: 311 AQYLISQRVTYE 322
>gi|56118219|ref|NP_001007226.1| insulin-like growth factor 2 mRNA-binding protein 2 isoform b [Homo
sapiens]
gi|4883681|gb|AAD31596.1|AF057352_1 hepatocellular carcinoma autoantigen [Homo sapiens]
gi|119598615|gb|EAW78209.1| insulin-like growth factor 2 mRNA binding protein 2, isoform CRA_a
[Homo sapiens]
gi|410223072|gb|JAA08755.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
gi|410251294|gb|JAA13614.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
gi|410302888|gb|JAA30044.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
gi|410342485|gb|JAA40189.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
Length = 556
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 110/484 (22%), Positives = 188/484 (38%), Gaps = 135/484 (27%)
Query: 14 DDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIM--------FRVLCPVSKIDGVIGKDG 65
D+ + P+ +++Q+ GD+S + + PGG R+L P + +IGK+G
Sbjct: 157 DEEVSSPSPPQRAQR--GDHSSREQGHA-PGGTSQARQIDFPLRILVPTQFVGAIIGKEG 213
Query: 66 EMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASV 125
+ I++ T + I R EN+G E V
Sbjct: 214 LTIKNITKQTQSRV-------------------------------DIHRKENSGAAEKPV 242
Query: 126 ADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSS 185
+ EG+ +A ++ E M + ET++A++
Sbjct: 243 TIHA-------TPEGT---------------SEACRMILEIMQKEADETKLAEE------ 274
Query: 186 KFVLRLLVLSTQVGCLLGKGGCVIKQID-----KLPTCALAS------DEVVQITGEVDT 234
L++L + VG L+GK G +K+I+ K+ +L + + + G V+
Sbjct: 275 -IPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEA 333
Query: 235 VRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPM 294
A I +L + D ++ + S P H Q P+
Sbjct: 334 CASAEIEIMKKLREAFENDMLAVNTHSGYFSSLYPHH----QFGPF-------------- 375
Query: 295 PPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVME 354
P H P EI+ L + VG +IGK GA I+ L + G IK+
Sbjct: 376 ----PHHHSY-------PEQEIVN--LFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAP 422
Query: 355 AVS-GTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPD------NREQTVMTRLL 407
A +R+++I+GP +A + Q RI + + E + +
Sbjct: 423 AEGPDVSERMVIITGPP----------EAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIR 472
Query: 408 VASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVL-INGEFEAVQEA 466
V S+ G ++GKGG + E++ L+ A + I+ +DQ P ENEEV++ I G F A Q A
Sbjct: 473 VPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVIVRIIGHFFASQTA 528
Query: 467 LFQI 470
+I
Sbjct: 529 QRKI 532
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 72/342 (21%), Positives = 126/342 (36%), Gaps = 96/342 (28%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV-MEAVSGTEDRLIVISGPAHPDDRIS 377
R+L + VG +IGK G I+++ ++T + + + SG ++ + I A P+
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIH--ATPEGTSE 253
Query: 378 APQDAVLRV------QTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLS 431
A + +L + +T++A IP ++L + +G L+GK G + ++ +
Sbjct: 254 ACR-MILEIMQKEADETKLAEEIP--------LKILAHNGLVGRLIGKEGRNLKKIEHET 304
Query: 432 GAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLN 491
G I I + E + + G EA A +I +LR F D ++N
Sbjct: 305 GTKITISSLQDL--SIYNPERTITVKGTVEACASAEIEIMKKLREAFENDML-AVN---- 357
Query: 492 PTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHI 551
+ G +S S +PH F HH
Sbjct: 358 -------------------THSGYFS-------------------SLYPHHQFGPFPHH- 378
Query: 552 HRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACL 611
+P+ V + +P V I G+ GA +
Sbjct: 379 --------------------------HSYPE-----QEIVNLFIPTQAVGAIIGKKGAHI 407
Query: 612 KQIRQISDAKITITDPK-PGATETVIIISGTPEQTHAAQSLI 652
KQ+ + + A I I + P +E ++II+G PE AQ I
Sbjct: 408 KQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI 449
>gi|189239335|ref|XP_973573.2| PREDICTED: similar to pasilla CG16765-PK [Tribolium castaneum]
Length = 535
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 101/228 (44%), Gaps = 40/228 (17%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA---VSGTEDRLIVISGPAHPDDR 375
F++L G +IGKGG I L++ETG +K+ ++ GT +R+ +I+G
Sbjct: 47 FKVLVPSVAAGAIIGKGGETIAQLQKETGARVKMSKSHDFYPGTTERVCLITGSV----- 101
Query: 376 ISAPQDAVLRVQTRIARAI---PDNREQTVMT------------RLLVASNQIGCLLGKG 420
DA++ V IA I PD + V T ++LV ++ G ++GK
Sbjct: 102 -----DAIMVVADFIADKIREKPDLTKPLVETESKLMQDRDKQVKILVPNSTAGMIIGKA 156
Query: 421 GSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFR 480
G+ I ++++ SG+Y++I Q K S E + + GE E ++A I ++
Sbjct: 157 GNYIKQIKETSGSYVQI---SQKAKDVSLQERCITVIGEKEQNRQACQMILAKIVED--- 210
Query: 481 DAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDA 528
P LN ++ D P ++ P N G +F+ A
Sbjct: 211 ---PQSGTCLNVSYADVNGPVANY---NPTGSPFAQQNAGSAFNASTA 252
>gi|164655395|ref|XP_001728827.1| hypothetical protein MGL_3994 [Malassezia globosa CBS 7966]
gi|159102713|gb|EDP41613.1| hypothetical protein MGL_3994 [Malassezia globosa CBS 7966]
Length = 382
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/350 (20%), Positives = 134/350 (38%), Gaps = 106/350 (30%)
Query: 187 FVLRLLVLSTQVGCLLGKGGCVIKQIDKLPTCALASDE--------VVQITGEVDTVRKA 238
V+R L++++ ++GK G I +I +L L E ++ ++G +D V KA
Sbjct: 85 IVMRALIITSDASVIIGKQGRHINEIRELSNARLNISESIPSNPERILTVSGALDAVSKA 144
Query: 239 LKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSI 298
L+ ++ ++ P D PS+
Sbjct: 145 FGLLVRRI-NDEPFDQ-----------------------------------------PSL 162
Query: 299 PKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA-VS 357
P + + R + + R+G +IG+ G+ I+ +++ +G + E +
Sbjct: 163 PGSRAASI-------------RFIIPNSRMGAIIGRQGSKIKEIQEASGARLHAGETMLP 209
Query: 358 GTEDRLIVISGPA----------------HPD---DRISAPQDAVLRVQTRIARAIPDNR 398
G+ +R++ I+G A HPD + + AV R T P N
Sbjct: 210 GSTERILSITGVADALHIAVYYVGATLLEHPDRGSNNLPYRPAAVNRALTPSLVGSPLNS 269
Query: 399 EQTVMTRL----------------------LVASNQIGCLLGKGGSIIAEMRKLSGAYIR 436
M L + ++ +GC++GKGG I E+R+LS ++I+
Sbjct: 270 PSASMLALSATNSPKALASVLTPGLQTQQIFIPNDLVGCIIGKGGQKINEIRQLSASHIK 329
Query: 437 ILGKDQ-IPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPS 485
I+ ++ I S +E +V I G +Q A+ + RL R A S
Sbjct: 330 IMERNAGIAAGGSGSERLVTITGPPPNIQMAVTLLYQRLEQEKMRLAHSS 379
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 105/230 (45%), Gaps = 33/230 (14%)
Query: 156 VQKALLLVFERMVEVEPETEVADQENTKSSKFV-LRLLVLSTQVGCLLGKGGCVIKQIDK 214
V KA L+ R+ + E DQ + S+ +R ++ ++++G ++G+ G IK+I +
Sbjct: 141 VSKAFGLLVRRIND-----EPFDQPSLPGSRAASIRFIIPNSRMGAIIGRQGSKIKEIQE 195
Query: 215 LPTCAL---------ASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPS 265
L +++ ++ ITG D + A+ + LL++ R ++P P +
Sbjct: 196 ASGARLHAGETMLPGSTERILSITGVADALHIAVYYVGATLLEHPDRGSNNLPYRPAAVN 255
Query: 266 HPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHD 325
L V G+P + + + P + VL +P + T ++ +
Sbjct: 256 RALTPSLV---GSPLNSPSASMLALSATNSPK----ALASVL-----TPGLQTQQIFIPN 303
Query: 326 ERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGT------EDRLIVISGP 369
+ VG +IGKGG I ++Q + IK+ME +G +RL+ I+GP
Sbjct: 304 DLVGCIIGKGGQKINEIRQLSASHIKIMERNAGIAAGGSGSERLVTITGP 353
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 72/357 (20%), Positives = 140/357 (39%), Gaps = 90/357 (25%)
Query: 312 PSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAH 371
P P ++ ++ D V +IGK G I +++ + + + E++ +R++ +SG
Sbjct: 82 PGPIVMRALIITSDASV--IIGKQGRHINEIRELSNARLNISESIPSNPERILTVSGAL- 138
Query: 372 PDDRISAPQDAVLRVQTRIAR----------AIPDNREQTVMTRLLVASNQIGCLLGKGG 421
DAV + + R ++P +R ++ R ++ ++++G ++G+ G
Sbjct: 139 ---------DAVSKAFGLLVRRINDEPFDQPSLPGSRAASI--RFIIPNSRMGAIIGRQG 187
Query: 422 SIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRD 481
S I E+++ SGA + G+ +P E ++ I G +A+ A++ + L H R
Sbjct: 188 SKIKEIQEASGARLH-AGETMLP---GSTERILSITGVADALHIAVYYVGATLLEHPDRG 243
Query: 482 AFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPH 541
S N P P +++ + PS +G P
Sbjct: 244 ---SNNLPYRPAAVNR-ALTPSLVG--------------------------------SPL 267
Query: 542 DDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVP 601
+ SA M L P + P + + +P LV
Sbjct: 268 NSPSASM--------------------LALSATNSPKALASVLTPGLQTQQIFIPNDLVG 307
Query: 602 IIQGEDGACLKQIRQISDAKITITDPKPG------ATETVIIISGTPEQTHAAQSLI 652
I G+ G + +IRQ+S + I I + G +E ++ I+G P A +L+
Sbjct: 308 CIIGKGGQKINEIRQLSASHIKIMERNAGIAAGGSGSERLVTITGPPPNIQMAVTLL 364
>gi|109042331|ref|XP_001095005.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 2 [Macaca mulatta]
gi|402860701|ref|XP_003894761.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 2 [Papio anubis]
Length = 556
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 108/484 (22%), Positives = 185/484 (38%), Gaps = 135/484 (27%)
Query: 14 DDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIM--------FRVLCPVSKIDGVIGKDG 65
D+ + P+ +++Q+ GD+S + + PGG R+L P + +IGK+G
Sbjct: 157 DEEVSSPSPPQRAQR--GDHSSREQGHA-PGGTSQARQIDFPLRILVPTQFVGAIIGKEG 213
Query: 66 EMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASV 125
+ I++ T + I R EN+G E V
Sbjct: 214 LTIKNITKQTQSRV-------------------------------DIHRKENSGAAEKPV 242
Query: 126 ADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSS 185
+ EG+ +A ++ E M + ET++A++
Sbjct: 243 TIHA-------TPEGT---------------SEACRMILEIMQKEADETKLAEE------ 274
Query: 186 KFVLRLLVLSTQVGCLLGKGGCVIKQID-----KLPTCALAS------DEVVQITGEVDT 234
L++L + VG L+GK G +K+I+ K+ +L + + + G V+
Sbjct: 275 -IPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEA 333
Query: 235 VRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPM 294
A I +L + D ++ + S P H Q P+ H
Sbjct: 334 CASAEIEIMKKLREAFENDMLAVNTHSGYFSSLYPHH----QFGPFPHHH---------- 379
Query: 295 PPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVME 354
PE L + VG +IGK GA I+ L + G IK+
Sbjct: 380 -----------------SYPEQEVVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAP 422
Query: 355 AVS-GTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPD------NREQTVMTRLL 407
A +R+++I+GP +A + Q RI + + E + +
Sbjct: 423 AEGPDVSERMVIITGPP----------EAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIR 472
Query: 408 VASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVL-INGEFEAVQEA 466
V S+ G ++GKGG + E++ L+ A + I+ +DQ P ENEEV++ I G F A Q A
Sbjct: 473 VPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVIVRIIGHFFASQTA 528
Query: 467 LFQI 470
+I
Sbjct: 529 QRKI 532
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 72/342 (21%), Positives = 126/342 (36%), Gaps = 96/342 (28%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV-MEAVSGTEDRLIVISGPAHPDDRIS 377
R+L + VG +IGK G I+++ ++T + + + SG ++ + I A P+
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIH--ATPEGTSE 253
Query: 378 APQDAVLRV------QTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLS 431
A + +L + +T++A IP ++L + +G L+GK G + ++ +
Sbjct: 254 ACR-MILEIMQKEADETKLAEEIP--------LKILAHNGLVGRLIGKEGRNLKKIEHET 304
Query: 432 GAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLN 491
G I I + E + + G EA A +I +LR F D ++N
Sbjct: 305 GTKITISSLQDL--SIYNPERTITVKGTVEACASAEIEIMKKLREAFENDML-AVN---- 357
Query: 492 PTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHI 551
+ G +S S +PH F HH
Sbjct: 358 -------------------THSGYFS-------------------SLYPHHQFGPFPHH- 378
Query: 552 HRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACL 611
+P+ V + +P V I G+ GA +
Sbjct: 379 --------------------------HSYPE-----QEVVNLFIPTQAVGAIIGKKGAHI 407
Query: 612 KQIRQISDAKITITDPK-PGATETVIIISGTPEQTHAAQSLI 652
KQ+ + + A I I + P +E ++II+G PE AQ I
Sbjct: 408 KQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI 449
>gi|432887611|ref|XP_004074938.1| PREDICTED: far upstream element-binding protein 3-like [Oryzias
latipes]
Length = 562
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 145/345 (42%), Gaps = 31/345 (8%)
Query: 325 DERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVL 384
D+ VG +IGKGG I ++QE+GC I++ G DR ++G ++ ++
Sbjct: 91 DKMVGFIIGKGGEQISRIQQESGCKIQIASDSGGMLDRPCTLTGSPENIEQAKRLLSEII 150
Query: 385 RVQTRIARAIPDNRE-QTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQI 443
Q R ++ + + ++L+ +N++G ++GKGG I ++++ +G + ++ D +
Sbjct: 151 E-QCRYGPGFHNDMDGNGSIQQMLIPANKVGLVIGKGGETIKQLQERTGVQMMMIQDDPM 209
Query: 444 PKCASENEEVVLINGEFEAVQEALFQITTRLR---HHFFRDAFPSINRPLNPTFLDQVSP 500
P A ++ + I G+ VQ+A + +R FR + T LD V P
Sbjct: 210 PTGA---DKPLRITGDPLKVQQARELVVKLIRDKDQGDFRTGRAEFGSKMGGTSLDVVVP 266
Query: 501 FPS---FIGRRELSPPGMYSNFGP--SFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPG 555
+ IGR + ++ G F + D + P +H H+
Sbjct: 267 RFAVGIIIGRNGEMIKKIQNDAGVRIQFKQDDGI-SPDRVAQVMGQPEHCHHAVHLINE- 324
Query: 556 MPPHMPDMKPWGPQGL-----MEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGAC 610
+ + +G G GG G + V VP ++ G+ G
Sbjct: 325 LVQTAQERDGYGVMGRRGRVDCNTGGAGGL--------QEVTYAVPADKCGLVIGKGGET 376
Query: 611 LKQIRQISDAKITITDPKPGATE---TVIIISGTPEQTHAAQSLI 652
+K I++ S A + + P +T+ + I GTP+Q A+ LI
Sbjct: 377 IKNIKEQSRAHVELQRNPPPSTDPNVRIFSIRGTPQQLEKARQLI 421
>gi|386764191|ref|NP_001245616.1| IGF-II mRNA-binding protein, isoform L [Drosophila melanogaster]
gi|383293324|gb|AFH07330.1| IGF-II mRNA-binding protein, isoform L [Drosophila melanogaster]
Length = 638
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 149/332 (44%), Gaps = 40/332 (12%)
Query: 165 ERMVEVEPETEVADQENTKS---SKFVLRLLVLSTQVGCLLGKGGCVIKQI----DKLPT 217
+R++EV + ++ + S S+ L++L + +G ++GK G IK+I D T
Sbjct: 205 KRILEVMQQEAISTNKGELSPECSEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKIT 264
Query: 218 CALASD-------EVVQITGEVDTVRKALKLISHQLLDNSPRDHESI-PGNPTGPS-HPL 268
+ +D ++ + G ++ + +A IS +L + D +++ P + P HP+
Sbjct: 265 VSSINDINSFNLERIITVKGLIENMSRAENQISTKLRQSYENDLQAMAPQSLMFPGLHPM 324
Query: 269 PDHSVSSQGAPYATGHRDVADIHLPMP-PSIPKFHES----GVLDRPKPSPEILTFRLLC 323
S G + T MP PS F S V+ P+ T L
Sbjct: 325 AMMSTPGNGMVFNTS----------MPFPSCQSFAMSKTPASVVPPVFPNDLQETTYLYI 374
Query: 324 HDERVGGVIGKGGAIIRSLKQETGCDIKVM-----EAVSGTEDRLIVISGPAHPDDRISA 378
+ VG +IG G+ IRS+ + + +K+ + + +R + I G P+ + A
Sbjct: 375 PNNAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGT--PEGQWKA 432
Query: 379 PQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRIL 438
+++ D+ TV LLVAS+Q+G ++GKGG + E+++++G+ I++
Sbjct: 433 QYMIFEKMREEGFMCGTDDVRLTV--ELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLP 490
Query: 439 GKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
P + E V I G F +VQ A +I
Sbjct: 491 EHALAPPSGGDEETPVHIIGLFYSVQSAQRRI 522
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 136/348 (39%), Gaps = 70/348 (20%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRIS 377
R+L E VG +IG+ G+ IR++ Q++ + V + G+ ++ I I G +P++ +
Sbjct: 145 LRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENVGSLEKSITIYG--NPENCTN 202
Query: 378 APQDAVLRVQTRIARAIPDNREQT------VMTRLLVASNQIGCLLGKGGSIIAEMRKLS 431
A + + +Q AI N+ + + ++L +N IG ++GK G+ I + + +
Sbjct: 203 ACKRILEVMQ---QEAISTNKGELSPECSEICLKILAHNNLIGRIIGKSGNTIKRIMQDT 259
Query: 432 GAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLN 491
I + + I + E ++ + G E + A QI+T+LR + D + +
Sbjct: 260 DTKITVSSINDI--NSFNLERIITVKGLIENMSRAENQISTKLRQSYENDL-----QAMA 312
Query: 492 PTFLDQVSPFPSFIGRRELSPP--GMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMH 549
P L FP +S P GM N F + P S P
Sbjct: 313 PQSL----MFPGLHPMAMMSTPGNGMVFNTSMPFPSCQSFAMSKTPASVVP--------- 359
Query: 550 HIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGA 609
P P L E + +P + V I G G+
Sbjct: 360 ---------------PVFPNDLQET----------------TYLYIPNNAVGAIIGTRGS 388
Query: 610 CLKQIRQISDAKITIT-----DPKPGATETVIIISGTPEQTHAAQSLI 652
++ I + S+A + I P TE + I GTPE AQ +I
Sbjct: 389 HIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGTPEGQWKAQYMI 436
>gi|195107855|ref|XP_001998509.1| GI24011 [Drosophila mojavensis]
gi|193915103|gb|EDW13970.1| GI24011 [Drosophila mojavensis]
Length = 574
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 90/187 (48%), Gaps = 23/187 (12%)
Query: 329 GGVIGKGGAIIRSLKQETGCDIKVMEA---VSGTEDRLIVISGPAHP--------DDRIS 377
G +IGKGG I SL+++TG +K+ ++ GT +R+ +I+G D+I
Sbjct: 78 GAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSVEGIMTVVDFIMDKIR 137
Query: 378 APQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRI 437
D ++ I +E+ ++LV ++ G ++GKGG+ I ++++ SG+Y++I
Sbjct: 138 EKPDLTTKI---IDAESKQAQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQI 194
Query: 438 LGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQ 497
Q PK S E + I G+ E + A I +++ P LN ++ D
Sbjct: 195 ---SQKPKDVSLQERCITIIGDKENNKNACKMILSKIVED------PQSGTCLNVSYADV 245
Query: 498 VSPFPSF 504
P +F
Sbjct: 246 NGPVANF 252
>gi|401626761|gb|EJS44683.1| pbp2p [Saccharomyces arboricola H-6]
Length = 416
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 138/361 (38%), Gaps = 52/361 (14%)
Query: 314 PEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPD 373
P + R+LC + ++G GA I +K ET I V + G +R++ + G
Sbjct: 67 PSHVHLRMLCLVKHASLIVGHKGATISKIKSETSARINVSNNIRGVPERIVYVRGTC--- 123
Query: 374 DRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
D ++ ++R + V LL+ + +GC++GK GS + E+ LS A
Sbjct: 124 DDVAKAYSMIVRALLEEHENEDQEEDIEVTINLLIPHHLMGCIIGKRGSRLREIEDLSAA 183
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPT 493
+ +Q+ N+ ++ I+G +A+ A F I L + F+ P + L +
Sbjct: 184 KL-FASPNQL---LLSNDRILTISGVPDAIHIATFYIGQTLLN--FQMESPQ--KKLKRS 235
Query: 494 FLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHR 553
Q + F S + P + +H D P F S F+
Sbjct: 236 IFYQPTQFNSVLIDHS-QPNAILHQRNHQYHPNDKQLSGRPNRKF---SVSSTFL----- 286
Query: 554 PGMPPHMPDMKPWGPQ-GLMEVGGPMGF-PDFVGPPHRRV-------------------- 591
+M P PQ V F P+FV P R +
Sbjct: 287 --------NMAP--PQYTTASVANATAFQPNFVIPNVRILDGSVVNSGISNHLSMNLVQQ 336
Query: 592 PVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSL 651
+ + + V + G+DG + +++ + I I DP A+E + I GT + AA L
Sbjct: 337 EIFIDENFVGNVIGKDGKHINSVKESTGCSIIIQDPVECASERRLSIRGTFMASQAAIML 396
Query: 652 I 652
I
Sbjct: 397 I 397
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 99/261 (37%), Gaps = 72/261 (27%)
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQIDKLPTCAL---------ASDEVVQITGEVDTVRKAL 239
+ LL+ +GC++GK G +++I+ L L ++D ++ I+G D + A
Sbjct: 154 INLLIPHHLMGCIIGKRGSRLREIEDLSAAKLFASPNQLLLSNDRILTISGVPDAIHIAT 213
Query: 240 KLISHQLLD---NSPRDH--ESIPGNPTGPSHPLPDHSVSSQGAPYATGHR--------- 285
I LL+ SP+ SI PT + L DHS P A H+
Sbjct: 214 FYIGQTLLNFQMESPQKKLKRSIFYQPTQFNSVLIDHS-----QPNAILHQRNHQYHPND 268
Query: 286 -----------DVADIHLPMPPSIPKFHESGVLDRPKPSPEIL--TFRLL---------- 322
V+ L M P P++ + V + P + R+L
Sbjct: 269 KQLSGRPNRKFSVSSTFLNMAP--PQYTTASVANATAFQPNFVIPNVRILDGSVVNSGIS 326
Query: 323 -------------CHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGP 369
+ VG VIGK G I S+K+ TGC I + + V +R + I G
Sbjct: 327 NHLSMNLVQQEIFIDENFVGNVIGKDGKHINSVKESTGCSIIIQDPVECASERRLSIRGT 386
Query: 370 AHPDDRISAPQDAVLRVQTRI 390
A Q A++ + +I
Sbjct: 387 ------FMASQAAIMLISNKI 401
>gi|386764188|ref|NP_001036268.2| IGF-II mRNA-binding protein, isoform K [Drosophila melanogaster]
gi|383293323|gb|ABI30974.2| IGF-II mRNA-binding protein, isoform K [Drosophila melanogaster]
Length = 631
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 149/332 (44%), Gaps = 40/332 (12%)
Query: 165 ERMVEVEPETEVADQENTKS---SKFVLRLLVLSTQVGCLLGKGGCVIKQI----DKLPT 217
+R++EV + ++ + S S+ L++L + +G ++GK G IK+I D T
Sbjct: 198 KRILEVMQQEAISTNKGELSPECSEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKIT 257
Query: 218 CALASD-------EVVQITGEVDTVRKALKLISHQLLDNSPRDHESI-PGNPTGPS-HPL 268
+ +D ++ + G ++ + +A IS +L + D +++ P + P HP+
Sbjct: 258 VSSINDINSFNLERIITVKGLIENMSRAENQISTKLRQSYENDLQAMAPQSLMFPGLHPM 317
Query: 269 PDHSVSSQGAPYATGHRDVADIHLPMP-PSIPKFHES----GVLDRPKPSPEILTFRLLC 323
S G + T MP PS F S V+ P+ T L
Sbjct: 318 AMMSTPGNGMVFNTS----------MPFPSCQSFAMSKTPASVVPPVFPNDLQETTYLYI 367
Query: 324 HDERVGGVIGKGGAIIRSLKQETGCDIKVM-----EAVSGTEDRLIVISGPAHPDDRISA 378
+ VG +IG G+ IRS+ + + +K+ + + +R + I G P+ + A
Sbjct: 368 PNNAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGT--PEGQWKA 425
Query: 379 PQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRIL 438
+++ D+ TV LLVAS+Q+G ++GKGG + E+++++G+ I++
Sbjct: 426 QYMIFEKMREEGFMCGTDDVRLTV--ELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLP 483
Query: 439 GKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
P + E V I G F +VQ A +I
Sbjct: 484 EHALAPPSGGDEETPVHIIGLFYSVQSAQRRI 515
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 136/348 (39%), Gaps = 70/348 (20%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRIS 377
R+L E VG +IG+ G+ IR++ Q++ + V + G+ ++ I I G +P++ +
Sbjct: 138 LRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENVGSLEKSITIYG--NPENCTN 195
Query: 378 APQDAVLRVQTRIARAIPDNREQT------VMTRLLVASNQIGCLLGKGGSIIAEMRKLS 431
A + + +Q AI N+ + + ++L +N IG ++GK G+ I + + +
Sbjct: 196 ACKRILEVMQ---QEAISTNKGELSPECSEICLKILAHNNLIGRIIGKSGNTIKRIMQDT 252
Query: 432 GAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLN 491
I + + I + E ++ + G E + A QI+T+LR + D + +
Sbjct: 253 DTKITVSSINDI--NSFNLERIITVKGLIENMSRAENQISTKLRQSYENDL-----QAMA 305
Query: 492 PTFLDQVSPFPSFIGRRELSPP--GMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMH 549
P L FP +S P GM N F + P S P
Sbjct: 306 PQSLM----FPGLHPMAMMSTPGNGMVFNTSMPFPSCQSFAMSKTPASVVP--------- 352
Query: 550 HIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGA 609
P P L E + +P + V I G G+
Sbjct: 353 ---------------PVFPNDLQET----------------TYLYIPNNAVGAIIGTRGS 381
Query: 610 CLKQIRQISDAKITIT-----DPKPGATETVIIISGTPEQTHAAQSLI 652
++ I + S+A + I P TE + I GTPE AQ +I
Sbjct: 382 HIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGTPEGQWKAQYMI 429
>gi|452978145|gb|EME77909.1| hypothetical protein MYCFIDRAFT_63821 [Pseudocercospora fijiensis
CIRAD86]
Length = 480
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 142/373 (38%), Gaps = 63/373 (16%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
L R + VIGKGG + +++ G V E G +R++ +SG
Sbjct: 117 LHVRAIISSAEAATVIGKGGENVTQIRRLAGAKCTVSEYTRGAVERILTVSGHV------ 170
Query: 377 SAPQDAVLRVQTRIARAIPDNRE----------QTVMTRLLVASNQIGCLLGKGGSIIAE 426
DAV + I R + N+E +T RLL+ IG ++GK G I E
Sbjct: 171 ----DAVAKAFGLIIRTL--NQEPLEQASTPQSKTYPLRLLIPHILIGSIIGKQGVRIRE 224
Query: 427 MRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSI 486
+++ SGA R+ + ++E VVL G +AV A + + + L D F
Sbjct: 225 IQEASGA--RLNASESCLPLSTERSLVVL--GVADAVHIATYYVGSTLVEQLT-DRF--- 276
Query: 487 NRPLNPTFLD-------------QVSPF-PSFIGRRELSPPGM--YSNFGPSFHKFDAVG 530
P + QV P+ P G + P +SN GP + G
Sbjct: 277 GGPAASNYAGRHGGPQGVVPGGMQVVPYVPQNTGGQMGHPDNFRKHSN-GPPRTPANPYG 335
Query: 531 GPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRR 590
P H +H P P + GPQ G GPP +
Sbjct: 336 QP----YMHGQPPQQHPQQPMHYGAASPRAPYVG-AGPQQPQPYGHAAPSQAHAGPPQQP 390
Query: 591 V-----------PVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIIS 639
V + +P +V I G+ GA + +IRQ+S + I I +P+ E ++ I+
Sbjct: 391 VQGMVPGQPITQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQDNNNERLVTIT 450
Query: 640 GTPEQTHAAQSLI 652
GT E A ++
Sbjct: 451 GTQECNQMALYML 463
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 400 QTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGE 459
Q + ++ + ++ +G ++GKGG+ I E+R+LSG+ I+I + NE +V I G
Sbjct: 398 QPITQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQD-----NNNERLVTITGT 452
Query: 460 FEAVQEALFQITTRL 474
E Q AL+ + +RL
Sbjct: 453 QECNQMALYMLYSRL 467
>gi|326935820|ref|XP_003213964.1| PREDICTED: poly(rC)-binding protein 4-like, partial [Meleagris
gallopavo]
Length = 232
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 82/161 (50%), Gaps = 23/161 (14%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT R+L H + +G +IGK G ++ +++++ I + E +R+ I+G
Sbjct: 19 LTLRMLMHGKEIGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGST------ 70
Query: 377 SAPQDAVLRVQTRIARAIPDNR-------EQTVMTRLLVASNQIGCLLGKGGSIIAEMRK 429
DAV R + IA + ++ V RL++ ++Q G L+GK G+ I E+R+
Sbjct: 71 ----DAVFRAVSMIAFKLEEDLGDGTAAGRTPVTLRLVIPASQCGSLIGKAGTKIREIRE 126
Query: 430 LSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
SGA +++ G D +P + E V ++G + + + + QI
Sbjct: 127 SSGAQVQVAG-DLLP---NSTERAVTVSGVPDTIIQCVRQI 163
>gi|195388678|ref|XP_002053006.1| GJ23641 [Drosophila virilis]
gi|194151092|gb|EDW66526.1| GJ23641 [Drosophila virilis]
Length = 574
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 90/187 (48%), Gaps = 23/187 (12%)
Query: 329 GGVIGKGGAIIRSLKQETGCDIKVMEA---VSGTEDRLIVISGPAHPD--------DRIS 377
G +IGKGG I SL+++TG +K+ ++ GT +R+ +I+G D+I
Sbjct: 78 GAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSVEGIMTVVDFIMDKIR 137
Query: 378 APQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRI 437
D ++ I +E+ ++LV ++ G ++GKGG+ I ++++ SG+Y++I
Sbjct: 138 EKPDLTTKI---IDAESKQAQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQI 194
Query: 438 LGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQ 497
Q PK S E + I G+ E + A I +++ P LN ++ D
Sbjct: 195 ---SQKPKDVSLQERCITIIGDKENNKNACKMILSKIVED------PQSGTCLNVSYADV 245
Query: 498 VSPFPSF 504
P +F
Sbjct: 246 NGPVANF 252
>gi|332215035|ref|XP_003256642.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 5 [Nomascus leucogenys]
Length = 577
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 109/484 (22%), Positives = 195/484 (40%), Gaps = 115/484 (23%)
Query: 14 DDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIM--------FRVLCPVSKIDGVIGKDG 65
D+ + P+ +++Q+ GD+S + + PGG R+L P + +IGK+G
Sbjct: 158 DEEVSSPSPPQRAQR--GDHSSREQGHA-PGGTSQARQIDFPLRILVPTQFVGAIIGKEG 214
Query: 66 EMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASV 125
+ I++ T + I R EN+G E V
Sbjct: 215 LTIKNITKQTQSRV-------------------------------DIHRKENSGAAEKPV 243
Query: 126 ADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSS 185
+ EG+ +A ++ E M + ET++A++
Sbjct: 244 TIHA-------TPEGT---------------SEACRMILEIMQKEADETKLAEE------ 275
Query: 186 KFVLRLLVLSTQVGCLLGKGGCVIKQID-----KLPTCALAS------DEVVQITGEVDT 234
L++L + VG L+GK G +K+I+ K+ +L + + + G V+
Sbjct: 276 -IPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEA 334
Query: 235 VRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPM 294
A I +L + D ++ ++ +P ++S+ G ++TG ++ P
Sbjct: 335 CASAEIEIMKKLREAFENDMLAV----NQQANLIPGLNLSALGI-FSTGLSVLSPPAGPR 389
Query: 295 PPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVME 354
+ P PE L + VG +IGK GA I+ L + G IK+
Sbjct: 390 GAPPAAPY------HPFAYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAP 443
Query: 355 AVS-GTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPD------NREQTVMTRLL 407
A +R+++I+GP +A + Q RI + + E + +
Sbjct: 444 AEGPDVSERMVIITGPP----------EAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIR 493
Query: 408 VASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVL-INGEFEAVQEA 466
V S+ G ++GKGG + E++ L+ A + I+ +DQ P ENEEV++ I G F A Q A
Sbjct: 494 VPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVIVRIIGHFFASQTA 549
Query: 467 LFQI 470
+I
Sbjct: 550 QRKI 553
Score = 47.0 bits (110), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 132/343 (38%), Gaps = 78/343 (22%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV-MEAVSGTEDRLIVISGPAHPDDRIS 377
R+L + VG +IGK G I+++ ++T + + + SG ++ + I A P+
Sbjct: 197 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIH--ATPEGTSE 254
Query: 378 APQDAVLRV------QTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLS 431
A + +L + +T++A IP ++L + +G L+GK G + ++ +
Sbjct: 255 ACR-MILEIMQKEADETKLAEEIP--------LKILAHNGLVGRLIGKEGRNLKKIEHET 305
Query: 432 GAYIRILGKDQIPKCASEN-EEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPL 490
G I I + + N E + + G EA A +I +LR F D ++N+
Sbjct: 306 GTKITI---SSLQDLSIYNPERTITVKGTVEACASAEIEIMKKLREAFENDML-AVNQ-- 359
Query: 491 NPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHH 550
Q + P LS G++S G PP +HP
Sbjct: 360 ------QANLIPGL----NLSALGIFSTGLSVLSPPAGPRGAPPAAPYHP---------- 399
Query: 551 IHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGAC 610
F P V + +P V I G+ GA
Sbjct: 400 --------------------------------FAYPEQEIVNLFIPTQAVGAIIGKKGAH 427
Query: 611 LKQIRQISDAKITITDPK-PGATETVIIISGTPEQTHAAQSLI 652
+KQ+ + + A I I + P +E ++II+G PE AQ I
Sbjct: 428 IKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI 470
>gi|260064185|gb|ACX30053.1| MIP13670p [Drosophila melanogaster]
Length = 346
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 90/187 (48%), Gaps = 23/187 (12%)
Query: 329 GGVIGKGGAIIRSLKQETGCDIKVMEA---VSGTEDRLIVISGPAHP--------DDRIS 377
G +IGKGG I SL+++TG +K+ ++ GT +R+ +I+G D+I
Sbjct: 158 GAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMVVMEFIMDKIR 217
Query: 378 APQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRI 437
D ++ ++ + +Q ++LV ++ G ++GKGG+ I ++++ SG+Y++I
Sbjct: 218 EKPDLTNKIVDTDSKQTQERDKQV---KILVPNSTAGMIIGKGGAFIKQIKEESGSYVQI 274
Query: 438 LGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQ 497
Q P S E + I G+ E + A I +++ P LN ++ D
Sbjct: 275 ---SQKPTDVSLQERCITIIGDKENNKNACKMILSKIVED------PQSGTCLNVSYADV 325
Query: 498 VSPFPSF 504
P +F
Sbjct: 326 SGPVANF 332
>gi|47222225|emb|CAG11104.1| unnamed protein product [Tetraodon nigroviridis]
Length = 580
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 97/392 (24%), Positives = 152/392 (38%), Gaps = 59/392 (15%)
Query: 268 LPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDER 327
+PD + S + AP A G R + P P+ + RPK +I R+L +
Sbjct: 126 IPDETASPE-APSAGGRRSF-NTRGP-----PRSGSPSLGARPKVQSDI-PLRMLVPTQF 177
Query: 328 VGGVIGKGGAIIRSLKQET--GCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLR 385
VG +IGK G IR+L ++T DI E E + + S P + D + +
Sbjct: 178 VGAIIGKQGDTIRNLTKQTHSKIDIHRKENAGAAEKPITIHSTPEGSSNACRTIMDIMQK 237
Query: 386 --VQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQI 443
+ T+ IP ++LV +N +G L+GK G + ++ + +G I I +
Sbjct: 238 EAIDTKFTEEIP--------LKILVHNNFVGRLIGKEGRNLKKIEQDTGTKITISSLQDL 289
Query: 444 PKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRD-AFPSINRPLNPTF-LDQVSPF 501
E + + G EA A ++ ++R + D A ++ L P L+ + F
Sbjct: 290 --TLYNPERTITVKGSIEACGRAEEEVMKKIREAYESDVAAMNLQSNLIPGLNLNALGLF 347
Query: 502 PSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPHMP 561
PS PGM GPS PPPG+ H G P+
Sbjct: 348 PS-------GSPGM----GPSMSSV------PPPGA-----------HGGCSFGCSPYGV 379
Query: 562 DMKPWGPQGLMEVGGPMGFPDFVGPPHRR-VPVVVPRSLVPIIQGEDGACLKQIRQISDA 620
+ W +M G G P V + +P V I G+ G +KQ+ + A
Sbjct: 380 EGPLWA--SMMSASG----QTLAGSPESETVHLFIPTLAVGAIIGKQGQHIKQLSHFAGA 433
Query: 621 KITITDPKPGATETVIIISGTPEQTHAAQSLI 652
I + ++II G PE AQ I
Sbjct: 434 SIKASRKGMDPKHRMVIIVGPPEAQFKAQCRI 465
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 73/163 (44%), Gaps = 19/163 (11%)
Query: 313 SPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHP 372
SPE T L VG +IGK G I+ L G IK + R+++I GP
Sbjct: 398 SPESETVHLFIPTLAVGAIIGKQGQHIKQLSHFAGASIKASRKGMDPKHRMVIIVGPP-- 455
Query: 373 DDRISAPQDAVLRVQTRIARAIPD------NREQTVMTRLLVASNQIGCLLGKGGSIIAE 426
+A + Q RI + + E + + V S G ++GKGG + E
Sbjct: 456 --------EAQFKAQCRIFGKLKEENFFGPKEEVKLEAHIKVPSFAAGRVIGKGGKTVNE 507
Query: 427 MRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQ 469
++ L+ A + ++ +DQ P +++ +V I G F A Q + ++
Sbjct: 508 LQNLTCAEV-VVPRDQTPD--EKDQVIVKIIGHFFACQVSFYR 547
>gi|403286483|ref|XP_003934516.1| PREDICTED: poly(rC)-binding protein 1-like isoform 1 [Saimiri
boliviensis boliviensis]
gi|403286485|ref|XP_003934517.1| PREDICTED: poly(rC)-binding protein 1-like isoform 2 [Saimiri
boliviensis boliviensis]
Length = 376
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 84/157 (53%), Gaps = 11/157 (7%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK ++ +++E+G + E +R+I ++GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKNEESVKRIREESGARFSISEG--NCPERIITLTGPTCAIFKA 71
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I ++ ++ + V RL+V + Q G L+GKGG I E+R+ +GA
Sbjct: 72 FAMM--INKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
+++ G D +P + E+ + + ++V E + QI
Sbjct: 130 QVQVSG-DMLP---NSTEQAITVAVVPQSVTECVQQI 162
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 127/310 (40%), Gaps = 64/310 (20%)
Query: 119 GREEASVAD-ESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVA 177
G+ E SV ++ S++EG+ + T + KA ++ ++ E + +
Sbjct: 30 GKNEESVKRIREESGARFSISEGNCPERIITLTGPTCAIFKAFAMMINKL---EEDINSS 86
Query: 178 DQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIKQI------------DKLPTCALASD 223
+T +S+ LRL+V +TQ G L+GKGGC IK+I D LP +++
Sbjct: 87 MTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVSGDMLPN---STE 143
Query: 224 EVVQITGEVDTVRKALKLISHQLLDNSPRDHES----IPGNPTGPSHPLP-----DHSVS 274
+ + + +V + ++ I +L+ P+ + IP P S P+ D
Sbjct: 144 QAITVAVVPQSVTECVQQICLVMLETLPQCPQGRVMPIPYQPMPASSPVTCAGGQDRGSD 203
Query: 275 SQGAPYAT--------------GHRDVADIHLPMPPSIPKFHE--------SGVLDRPKP 312
+ G P+AT G ++ +HL + + +G
Sbjct: 204 AAGYPHATRDLGVPPLDACSTQGQHTISPLHLAKLNQVARQQSHIAMLHGGTGFAGIESS 263
Query: 313 SPEILTFR------------LLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTE 360
SPE+ +R L + +G +IG+ G I ++Q +G IK+ V G+
Sbjct: 264 SPEVKGYRASLDASTQTTHELTIPNNLIGCIIGRQGVNINEIRQMSGAQIKIANPVEGSS 323
Query: 361 DRLIVISGPA 370
R + I+G A
Sbjct: 324 GRQVTITGSA 333
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%)
Query: 593 VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLI 652
+ +P +L+ I G G + +IRQ+S A+I I +P G++ + I+G+ AQ LI
Sbjct: 284 LTIPNNLIGCIIGRQGVNINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLI 343
Query: 653 QAFVMSE 659
A + SE
Sbjct: 344 NARLFSE 350
>gi|345796407|ref|XP_003434167.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 2
isoform 1 [Canis lupus familiaris]
Length = 488
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 110/484 (22%), Positives = 187/484 (38%), Gaps = 135/484 (27%)
Query: 14 DDNHTEPNGKEKSQKLAGDYSENQPSKSFPGG--------IMFRVLCPVSKIDGVIGKDG 65
D+ + P +++Q+ GD+S + + PGG R+L P + +IGK+G
Sbjct: 89 DEEVSSPTPPQRAQR--GDHSSREQGHA-PGGSSQARQIDFPLRILVPTQFVGAIIGKEG 145
Query: 66 EMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASV 125
+ I++ T + I R EN+G E V
Sbjct: 146 LTIKNITKQTQSRV-------------------------------DIHRKENSGAAEKPV 174
Query: 126 ADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSS 185
+ EG+ +A ++ E M + ET++A++
Sbjct: 175 TIHA-------TPEGT---------------SEACRMILEIMQKEADETKLAEE------ 206
Query: 186 KFVLRLLVLSTQVGCLLGKGGCVIKQID-----KLPTCALAS------DEVVQITGEVDT 234
L++L + VG L+GK G +K+I+ K+ +L + + + G V+
Sbjct: 207 -IPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEA 265
Query: 235 VRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPM 294
A I +L + D ++ + S P H Q P+
Sbjct: 266 CANAEVEIMKKLREAFENDMLAVNTHSGYFSSLYPPH----QFGPF-------------- 307
Query: 295 PPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVME 354
P H P EI+ L + VG +IGK GA I+ L + G IK+
Sbjct: 308 ----PHHHSY-------PEQEIVN--LFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAP 354
Query: 355 AVS-GTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPD------NREQTVMTRLL 407
A +R+++I+GP +A + Q RI + + E + +
Sbjct: 355 AEGPDVSERMVIITGPP----------EAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIR 404
Query: 408 VASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVL-INGEFEAVQEA 466
V S+ G ++GKGG + E++ L+ A + I+ +DQ P ENEEV++ I G F A Q A
Sbjct: 405 VPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVIVRIIGHFFASQTA 460
Query: 467 LFQI 470
+I
Sbjct: 461 QRKI 464
Score = 38.9 bits (89), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 75/170 (44%), Gaps = 20/170 (11%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV-MEAVSGTEDRLIVISGPAHPDDRIS 377
R+L + VG +IGK G I+++ ++T + + + SG ++ + I A P+
Sbjct: 128 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIH--ATPEGTSE 185
Query: 378 APQDAVLRV------QTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLS 431
A + +L + +T++A IP ++L + +G L+GK G + ++ +
Sbjct: 186 ACR-MILEIMQKEADETKLAEEIP--------LKILAHNGLVGRLIGKEGRNLKKIEHET 236
Query: 432 GAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRD 481
G I I + E + + G EA A +I +LR F D
Sbjct: 237 GTKITISSLQDL--SIYNPERTITVKGTVEACANAEVEIMKKLREAFEND 284
>gi|147767494|emb|CAN60206.1| hypothetical protein VITISV_036062 [Vitis vinifera]
Length = 242
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 51/84 (60%), Gaps = 4/84 (4%)
Query: 380 QDAVLRVQTRIA--RAIPDNREQT--VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYI 435
+DA+ RV ++ + ++ E+ V +LLV S+QIGC++GKGG II + SGA I
Sbjct: 56 EDALFRVHDKVVSEKVHSEDFEEASQVTVQLLVTSDQIGCVIGKGGQIIQNIYSESGAQI 115
Query: 436 RILGKDQIPKCASENEEVVLINGE 459
IL D + CA +E+V I+GE
Sbjct: 116 YILKNDHLLSCALSFDELVQISGE 139
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 101/222 (45%), Gaps = 44/222 (19%)
Query: 120 REEASVADESDNKKEDSVNEG------------SVLMDGLNSEKETSKVQKALLLVFERM 167
++ S +D DN +N G +V +D L + KE +++ AL V +++
Sbjct: 10 KQAQSQSDYGDNGGNKRINPGDDRNPFTIGPDDTVYID-LYALKE--RLEDALFRVHDKV 66
Query: 168 VEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI-------------DK 214
V +V ++ ++S+ ++LLV S Q+GC++GKGG +I+ I D
Sbjct: 67 VS----EKVHSEDFEEASQVTVQLLVTSDQIGCVIGKGGQIIQNIYSESGAQIYILKNDH 122
Query: 215 LPTCALASDEVVQITGEVDTV-RKALKL------ISHQLLDNSPRDHESIPGNPTGPSHP 267
L +CAL+ DE+VQI+GE + R +KL I H L P + S G+ GP+
Sbjct: 123 LLSCALSFDELVQISGERPLLGRLFIKLHLFFMIIQHLLASIVPIGYSS-GGSLIGPTSG 181
Query: 268 LPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDR 309
P ++ Y V H P +FHE L R
Sbjct: 182 APIMGLAPLVGTYGGIEVTVETGHAPF----TQFHEMRHLQR 219
>gi|195499424|ref|XP_002096942.1| GE25952 [Drosophila yakuba]
gi|194183043|gb|EDW96654.1| GE25952 [Drosophila yakuba]
Length = 572
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 90/184 (48%), Gaps = 17/184 (9%)
Query: 329 GGVIGKGGAIIRSLKQETGCDIKVMEA---VSGTEDRLIVISGPAHPDDRISAPQDAVLR 385
G +IGKGG I SL+++TG +K+ ++ GT +R+ +I+G + +R
Sbjct: 78 GAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMVVLEFIMDKIR 137
Query: 386 VQTRIARAIPD-----NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGK 440
+ + I D +E+ ++LV ++ G ++GKGG+ I ++++ SG+Y++I
Sbjct: 138 EKPDLTNKIVDVESKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQI--- 194
Query: 441 DQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSP 500
Q PK S E + I G+ E + A I +++ P LN ++ D P
Sbjct: 195 SQKPKDVSLQERCITIIGDKENNKNACKMILSKIVED------PQSGTCLNVSYADVSGP 248
Query: 501 FPSF 504
+F
Sbjct: 249 VANF 252
>gi|403270472|ref|XP_003927203.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
[Saimiri boliviensis boliviensis]
Length = 585
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 141/343 (41%), Gaps = 55/343 (16%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV-MEAVSGTEDRLIVISGPAHPDDRIS 377
R+L + VG +IGK G I+++ ++T + + + SG ++ + I A P+
Sbjct: 182 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIH--ATPEGTSE 239
Query: 378 APQDAVLRV------QTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLS 431
A + +L + +T++A IP ++L + +G L+GK G + ++ +
Sbjct: 240 ACR-MILEIMQKEAEETKLAEEIP--------LKILAHNGLVGRLIGKEGRNLKKIEHET 290
Query: 432 GAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLN 491
G I I + E + + G EA A +I +LR F D ++N+ N
Sbjct: 291 GTKITISSLQDL--SIYNPERTITVKGTVEACACAEIEIMKKLREAFENDML-AVNQQAN 347
Query: 492 PTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHI 551
I LS G++S G PP +HP HS + +
Sbjct: 348 ------------LIPGLNLSALGIFSTGLSVLSPPAGPRGAPPAAPYHPFATHSGYFSSL 395
Query: 552 HRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRR-VPVVVPRSLVPIIQGEDGAC 610
+ PH +GP FP P + V + +P V I G+ GA
Sbjct: 396 Y-----PH----HQFGP-----------FPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAH 435
Query: 611 LKQIRQISDAKITITDPK-PGATETVIIISGTPEQTHAAQSLI 652
+KQ+ + + A I I + P +E ++II+G PE AQ I
Sbjct: 436 IKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI 478
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 111/501 (22%), Positives = 198/501 (39%), Gaps = 126/501 (25%)
Query: 14 DDNHTEPNGKEKSQKLAGDYSENQPSKSFPGG--------IMFRVLCPVSKIDGVIGKDG 65
D+ + P+ +++Q+ GD+S + + PGG R+L P + +IGK+G
Sbjct: 143 DEEVSSPSPPQRAQR--GDHSSREQGNA-PGGSSQARQIDFPLRILVPTQFVGAIIGKEG 199
Query: 66 EMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASV 125
+ I++ T + I R EN+G E V
Sbjct: 200 LTIKNITKQTQSRV-------------------------------DIHRKENSGAAEKPV 228
Query: 126 ADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSS 185
+ EG+ +A ++ E M + ET++A++
Sbjct: 229 TI-------HATPEGT---------------SEACRMILEIMQKEAEETKLAEE------ 260
Query: 186 KFVLRLLVLSTQVGCLLGKGGCVIKQID-----KLPTCALAS------DEVVQITGEVDT 234
L++L + VG L+GK G +K+I+ K+ +L + + + G V+
Sbjct: 261 -IPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEA 319
Query: 235 VRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVAD----- 289
A I +L + D ++ ++ +P ++S+ G ++TG ++
Sbjct: 320 CACAEIEIMKKLREAFENDMLAV----NQQANLIPGLNLSALGI-FSTGLSVLSPPAGPR 374
Query: 290 ------------IHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGA 337
H S+ H+ G PE L + VG +IGK GA
Sbjct: 375 GAPPAAPYHPFATHSGYFSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGA 434
Query: 338 IIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPD 396
I+ L + G IK+ A +R+++I+GP +A + Q RI + +
Sbjct: 435 HIKQLARFAGASIKIAPAEGPDVSERMVIITGPP----------EAQFKAQGRIFGKLKE 484
Query: 397 ------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASEN 450
E + + V S+ G ++GKGG + E++ L+ A + I+ +DQ P EN
Sbjct: 485 ENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP---DEN 540
Query: 451 EEVVL-INGEFEAVQEALFQI 470
EEV++ I G F A Q A +I
Sbjct: 541 EEVIVRIIGHFFASQTAQRKI 561
>gi|326510613|dbj|BAJ87523.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326528939|dbj|BAJ97491.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 360
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 150/364 (41%), Gaps = 58/364 (15%)
Query: 308 DRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVM---EAVSGTEDRLI 364
D+ KP+ R L + G +IGKGG+ I + ++G I++ E GT DR+I
Sbjct: 44 DKEKPT----HLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRII 99
Query: 365 VISGPAHPDDRISAPQDAVLRVQTRIARAIPDNR-EQTVMTRLLVASNQIGCLLGKGGSI 423
++SG D+ + A + L ++ ++ N E RL+V ++ G ++GKGG+
Sbjct: 100 MVSGLF--DEVVKAME---LVLEKLLSEGEESNEAEARPKFRLVVPNSSCGGIIGKGGAT 154
Query: 424 IAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAF 483
I + S A I+I +D ++ +V I G + A+ I ++L
Sbjct: 155 IKSFIEDSHAGIKISPQDN--NFVGLHDRLVTITGPLNSQMRAIHLILSKLSEDVHYP-- 210
Query: 484 PSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYS---NFGPSFHKFDAVGGPPPPGSFHP 540
P+++ P L S +P+ + + PP Y+ N+GP+ G P
Sbjct: 211 PNLSSPFPYAGLGFPS-YPAAVPVGYMIPPVPYNNTVNYGPN-------------GYAAP 256
Query: 541 HDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLV 600
+ ++PG P P Q +G V +
Sbjct: 257 GGGGGGGRYQNNKPGTPVRSPANNDA--QESHTIG-------------------VADEHI 295
Query: 601 PIIQGEDGACLKQIRQISDAKITITDPK---PGATETVIIISGTPEQTHAAQSLIQAFVM 657
+ G G + +I Q S A+I I+D G ++ + I+G+ E AA+++I V
Sbjct: 296 GAVVGRAGRNITEIIQASGARIKISDRGDFIAGTSDRKVTITGSSEAIQAAEAMIMQRVT 355
Query: 658 SETE 661
+ E
Sbjct: 356 ASQE 359
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 77/208 (37%), Gaps = 71/208 (34%)
Query: 176 VADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKLPTCAL-----------ASDE 224
AD E+ K LR LV +T GC++GKGG I + +D
Sbjct: 38 AADHEDDKEKPTHLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDR 97
Query: 225 VVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGH 284
++ ++G D V KA++L+ +LL +E+
Sbjct: 98 IIMVSGLFDEVVKAMELVLEKLLSEGEESNEA---------------------------- 129
Query: 285 RDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQ 344
+ PKF RL+ + GG+IGKGGA I+S +
Sbjct: 130 -----------EARPKF------------------RLVVPNSSCGGIIGKGGATIKSFIE 160
Query: 345 ETGCDIKVM---EAVSGTEDRLIVISGP 369
++ IK+ G DRL+ I+GP
Sbjct: 161 DSHAGIKISPQDNNFVGLHDRLVTITGP 188
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 113/267 (42%), Gaps = 57/267 (21%)
Query: 137 VNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLST 196
N+ +++ GL E V KA+ LV E+++ ++ N ++ RL+V ++
Sbjct: 94 TNDRIIMVSGLFDE-----VVKAMELVLEKLLSE------GEESNEAEARPKFRLVVPNS 142
Query: 197 QVGCLLGKGGCVIKQIDKLPTCALA-----------SDEVVQITGEVDTVRKALKLISHQ 245
G ++GKGG IK + + D +V ITG +++ +A+ LI +
Sbjct: 143 SCGGIIGKGGATIKSFIEDSHAGIKISPQDNNFVGLHDRLVTITGPLNSQMRAIHLILSK 202
Query: 246 LLDN--------SPRDHESIPGNPTGPSH--------PLPDHSVSSQG-----APYATGH 284
L ++ SP + + G P+ P+ P+P ++ + G AP G
Sbjct: 203 LSEDVHYPPNLSSPFPYAGL-GFPSYPAAVPVGYMIPPVPYNNTVNYGPNGYAAPGGGGG 261
Query: 285 RDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQ 344
+ P P + P + + + DE +G V+G+ G I + Q
Sbjct: 262 GGRYQNNKPGTP----------VRSPANNDAQESHTIGVADEHIGAVVGRAGRNITEIIQ 311
Query: 345 ETGCDIKVMEA---VSGTEDRLIVISG 368
+G IK+ + ++GT DR + I+G
Sbjct: 312 ASGARIKISDRGDFIAGTSDRKVTITG 338
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 396 DNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVL 455
D++E+ R LV++ GC++GKGGS I + + SGA I++ + N+ +++
Sbjct: 43 DDKEKPTHLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHEF--FPGTNDRIIM 100
Query: 456 INGEFEAVQEALFQITTRL 474
++G F+ V +A+ + +L
Sbjct: 101 VSGLFDEVVKAMELVLEKL 119
>gi|432895613|ref|XP_004076075.1| PREDICTED: RNA-binding protein Nova-1-like isoform 1 [Oryzias
latipes]
Length = 503
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 95/195 (48%), Gaps = 29/195 (14%)
Query: 302 HESGVLDRPKPSPEILTF-RLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA---VS 357
E+G R E F ++L G +IGKGG I L++ETG IK+ ++
Sbjct: 49 EEAGCTKRTNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYP 108
Query: 358 GTEDRLIVISGPAHPDDRI---------SAPQDA-------VLRVQTRIARAIPDNREQT 401
GT +R+ +I G + + PQ A +L+ QT + PD +Q
Sbjct: 109 GTTERVCLIQGTVEALNSVHNFIAEKVREMPQSAQKPEPVSILQPQTTVN---PDRVKQA 165
Query: 402 VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFE 461
+L+V ++ G ++GKGG+ + + + SGA++++ Q P+ + E VV I+GE E
Sbjct: 166 ---KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTISGEPE 219
Query: 462 AVQEALFQITTRLRH 476
++A+ I +++
Sbjct: 220 QNRKAVEIIVQKIQE 234
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 591 VPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPK---PGATETVIIISGTPEQTHA 647
V + VP +LV I G+ G L + ++++ A+I I+ PG + I+G+P T A
Sbjct: 420 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSPAATQA 479
Query: 648 AQSLIQAFVMSE 659
AQ LI + E
Sbjct: 480 AQYLISQRITYE 491
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 403 MTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQ-IPKCASENEEVVLINGEFE 461
+ + V N +G +LGKGG + E ++L+GA I+I K + IP + N +V I G
Sbjct: 419 VVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIP--GTRNRKVT-ITGSPA 475
Query: 462 AVQEALFQITTRLRHH 477
A Q A + I+ R+ +
Sbjct: 476 ATQAAQYLISQRITYE 491
>gi|197101075|ref|NP_001125573.1| insulin-like growth factor 2 mRNA-binding protein 2 [Pongo abelii]
gi|75041981|sp|Q5RB68.1|IF2B2_PONAB RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 2;
Short=IGF2 mRNA-binding protein 2; Short=IMP-2; AltName:
Full=IGF-II mRNA-binding protein 2; AltName: Full=VICKZ
family member 2
gi|55728499|emb|CAH90992.1| hypothetical protein [Pongo abelii]
Length = 556
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 110/484 (22%), Positives = 188/484 (38%), Gaps = 135/484 (27%)
Query: 14 DDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIM--------FRVLCPVSKIDGVIGKDG 65
D+ + P+ +++Q+ GD+S + + PGG R+L P + +IGK+G
Sbjct: 157 DEEVSSPSPPQRAQR--GDHSSREQGHA-PGGTSQARQIDFPLRILVPTQFVGAIIGKEG 213
Query: 66 EMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASV 125
+ I++ T + I R EN+G E V
Sbjct: 214 LTIKNITKQTQSRV-------------------------------DIHRKENSGAAEKPV 242
Query: 126 ADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSS 185
+ EG+ +A ++ E M + ET++A++
Sbjct: 243 TIHA-------TPEGT---------------SEACRMILEIMQKEADETKLAEE------ 274
Query: 186 KFVLRLLVLSTQVGCLLGKGGCVIKQID-----KLPTCALAS------DEVVQITGEVDT 234
L++L + VG L+GK G +K+I+ K+ +L + + + G V+
Sbjct: 275 -IPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEA 333
Query: 235 VRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPM 294
A I +L + D ++ + S P H Q P+
Sbjct: 334 CASAEIEIMKKLREAFENDMLAVNTHSGYFSSLYPHH----QFGPF-------------- 375
Query: 295 PPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVME 354
P H P EI+ L + VG +IGK GA I+ L + G IK+
Sbjct: 376 ----PHHHSY-------PEQEIVN--LFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAP 422
Query: 355 AVS-GTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPD------NREQTVMTRLL 407
A +R+++I+GP +A + Q RI + + E + +
Sbjct: 423 AEGPDVSERMVIITGPP----------EAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIR 472
Query: 408 VASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVL-INGEFEAVQEA 466
V S+ G ++GKGG + E++ L+ A + I+ +DQ P ENEEV++ I G F A Q A
Sbjct: 473 VPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVIVRIIGHFFASQTA 528
Query: 467 LFQI 470
+I
Sbjct: 529 QRKI 532
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 72/342 (21%), Positives = 126/342 (36%), Gaps = 96/342 (28%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV-MEAVSGTEDRLIVISGPAHPDDRIS 377
R+L + VG +IGK G I+++ ++T + + + SG ++ + I A P+
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIH--ATPEGTSE 253
Query: 378 APQDAVLRV------QTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLS 431
A + +L + +T++A IP ++L + +G L+GK G + ++ +
Sbjct: 254 ACR-MILEIMQKEADETKLAEEIP--------LKILAHNGLVGRLIGKEGRNLKKIEHET 304
Query: 432 GAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLN 491
G I I + E + + G EA A +I +LR F D ++N
Sbjct: 305 GTKITISSLQDL--SIYNPERTITVKGTVEACASAEIEIMKKLREAFENDML-AVN---- 357
Query: 492 PTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHI 551
+ G +S S +PH F HH
Sbjct: 358 -------------------THSGYFS-------------------SLYPHHQFGPFPHH- 378
Query: 552 HRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACL 611
+P+ V + +P V I G+ GA +
Sbjct: 379 --------------------------HSYPE-----QEIVNLFIPTQAVGAIIGKKGAHI 407
Query: 612 KQIRQISDAKITITDPK-PGATETVIIISGTPEQTHAAQSLI 652
KQ+ + + A I I + P +E ++II+G PE AQ I
Sbjct: 408 KQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI 449
>gi|261197389|ref|XP_002625097.1| KH domain RNA-binding protein [Ajellomyces dermatitidis SLH14081]
gi|239595727|gb|EEQ78308.1| KH domain RNA-binding protein [Ajellomyces dermatitidis SLH14081]
gi|239606718|gb|EEQ83705.1| KH domain RNA-binding protein [Ajellomyces dermatitidis ER-3]
gi|327358051|gb|EGE86908.1| KH domain RNA-binding protein [Ajellomyces dermatitidis ATCC 18188]
Length = 363
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/339 (21%), Positives = 134/339 (39%), Gaps = 39/339 (11%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT R + + G +IGK G + L+ ETG V + V G DR++ ++GP +
Sbjct: 44 LTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGPLQGTAKA 103
Query: 377 SA-PQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYI 435
A +L ++ + T RLL++ NQ+G ++G+ G I ++ SG +
Sbjct: 104 YAIVAKGLLEGAPQLGMGGVVSNTGTHPVRLLISHNQMGTIIGRQGLKIKYIQDASGVRM 163
Query: 436 RILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFL 495
+ K+ +P+ E +V + G E +++A+++I L + R + NP
Sbjct: 164 -VAQKEMLPQS---TERIVEVQGTPEGIEKAVWEIGKCLIDDWQRGTGTVL---YNPAVR 216
Query: 496 DQVSPFPSFIGRRELSPPGMYSNFGPSFHKF-DAVGGPPPPGSFHPHDDHSAFMHHIHRP 554
V P + G Y G S+++ + G ++ + A
Sbjct: 217 ASVGGGPMNNSLGSGTAAGGYG--GRSYNRTGNGADFSDQTGGYNRRSNSDAANR----- 269
Query: 555 GMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQI 614
G+P D G + + +P +V I G G+ + +I
Sbjct: 270 GIPLVTED----------------------GEEVQTQNISIPSDMVGCIIGRGGSKISEI 307
Query: 615 RQISDAKITITD-PKPGATETVIIISGTPEQTHAAQSLI 652
R+ S A+I+I P E + I G+ A L+
Sbjct: 308 RRSSGARISIAKAPHDETGERMFTIMGSAAANEKALYLL 346
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 104/246 (42%), Gaps = 34/246 (13%)
Query: 158 KALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKLPT 217
KA +V + ++E P+ + + + V RLL+ Q+G ++G+ G IK I
Sbjct: 102 KAYAIVAKGLLEGAPQLGMGGVVSNTGTHPV-RLLISHNQMGTIIGRQGLKIKYIQDASG 160
Query: 218 CAL---------ASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPT------ 262
+ +++ +V++ G + + KA+ I L+D+ R ++ NP
Sbjct: 161 VRMVAQKEMLPQSTERIVEVQGTPEGIEKAVWEIGKCLIDDWQRGTGTVLYNPAVRASVG 220
Query: 263 -GPSHPLPDHSVSSQGAPYATGHRDV------ADIHLPMPPSIPKFHESGVLDRPKP--- 312
GP ++S+ S A G R AD + S +R P
Sbjct: 221 GGPM----NNSLGSGTAAGGYGGRSYNRTGNGADFS-DQTGGYNRRSNSDAANRGIPLVT 275
Query: 313 --SPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA-VSGTEDRLIVISGP 369
E+ T + + VG +IG+GG+ I +++ +G I + +A T +R+ I G
Sbjct: 276 EDGEEVQTQNISIPSDMVGCIIGRGGSKISEIRRSSGARISIAKAPHDETGERMFTIMGS 335
Query: 370 AHPDDR 375
A +++
Sbjct: 336 AAANEK 341
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 7/92 (7%)
Query: 392 RAIP---DNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCAS 448
R IP ++ E+ + + S+ +GC++G+GGS I+E+R+ SGA I I + P +
Sbjct: 269 RGIPLVTEDGEEVQTQNISIPSDMVGCIIGRGGSKISEIRRSSGARISIA---KAPHDET 325
Query: 449 ENEEVVLINGEFEAVQEALFQITTRLRHHFFR 480
E + I G A ++AL+ + L R
Sbjct: 326 -GERMFTIMGSAAANEKALYLLYENLEAEKMR 356
>gi|154281643|ref|XP_001541634.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150411813|gb|EDN07201.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 482
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 141/354 (39%), Gaps = 44/354 (12%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
+ R + IGKGG + +++ +G V + G +R++ +SG
Sbjct: 137 IHIRAVISSAEAATCIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVSGM------- 189
Query: 377 SAPQDAVLRVQTRIARAIPDN--------REQTVMTRLLVASNQIGCLLGKGGSIIAEMR 428
QDAV + I R + + + +T RLL+ IG ++GK G I E++
Sbjct: 190 ---QDAVAKAFGLIIRTLNNEPLEAPSTAQSKTYPLRLLIPHLLIGSIIGKSGVRIREIQ 246
Query: 429 KLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFF-RDAFPSIN 487
+ SGA R+ D ++E V+L G +AV A + + L R P+ +
Sbjct: 247 EASGA--RLNASDSCLPLSTERTLVIL--GVADAVHIATYYVAVTLVEQLTERFGGPAAS 302
Query: 488 RPLNPTFLD--------QVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSF- 538
+ QV P+ + P + P ++ + GG P
Sbjct: 303 AYATRSGGAAGVVPGGMQVVPYVPQPAGGQYGHPDTFKRHQPPGNRVVSTGGYGVPYVHG 362
Query: 539 ---HPHDDHSAFMH-HIHRPGMP---PHMPDMKPWG-PQGLMEVGGPMGFPDFVGPPHRR 590
P H A + RPG PH P P+G PQ GGP P P
Sbjct: 363 QPGQPQMPHQALHYGSSSRPGYSGAGPHQP--APYGAPQPAPVHGGPSAQPAGGVVPGAP 420
Query: 591 VP--VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTP 642
V + +P +V I G+ GA + +IR +S + I I +P+ + E ++ I+ P
Sbjct: 421 VTQQIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQDNSNERLVTITVLP 474
>gi|195022402|ref|XP_001985568.1| GH14429 [Drosophila grimshawi]
gi|193899050|gb|EDV97916.1| GH14429 [Drosophila grimshawi]
Length = 362
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 78/164 (47%), Gaps = 26/164 (15%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RL+ + VG +IGK G I+ ++E+G I + + +R++ +SG
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDG--SCPERIVTVSGTT------ 75
Query: 377 SAPQDAVLRVQTRIARAIPDNREQ----------TVMTRLLVASNQIGCLLGKGGSIIAE 426
A+ T I + + Q + RL+V ++Q G L+GK GS I E
Sbjct: 76 ----SAIFAAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKE 131
Query: 427 MRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
+R+ +G I++ + +P + E V ++G E + + ++QI
Sbjct: 132 IRQNTGCSIQV-ASEMLP---NSTERAVTLSGSAEQITQCIYQI 171
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 51/88 (57%), Gaps = 5/88 (5%)
Query: 387 QTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKC 446
Q R A A NR Q + V+++ IGC++GKGG+ IAE+R++SGA IRI ++ +
Sbjct: 254 QLRTANA---NRAQQQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEE--RE 308
Query: 447 ASENEEVVLINGEFEAVQEALFQITTRL 474
+ + I+G ++V A + I R+
Sbjct: 309 GGNTDRTITISGNPDSVALAQYLINMRI 336
>gi|363749247|ref|XP_003644841.1| hypothetical protein Ecym_2278 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888474|gb|AET38024.1| Hypothetical protein Ecym_2278 [Eremothecium cymbalariae
DBVPG#7215]
Length = 398
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 87/414 (21%), Positives = 143/414 (34%), Gaps = 122/414 (29%)
Query: 9 KRPHDDDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIMFRVLCPVSKIDGVIGKDGEMM 68
++P DD+ E K ++A D ++ P P + R+LC V V+G GE +
Sbjct: 16 RKPDDDEKSLEAEIK----RVALD-DDSPPVTHIPDYVHMRMLCLVKHASMVVGAKGERI 70
Query: 69 SQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASVADE 128
S+I +DT I V + + ER+V + S E++ + G+ ++ DE
Sbjct: 71 SRIKEDTKTRINVSDNIKNVPERVVYLRGS------CEDVAKAF------GKISRAINDE 118
Query: 129 SDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSKFV 188
D + N +S
Sbjct: 119 DDR-----------------------------------------------ESNERSLPLT 131
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQIDKLPTCAL---------ASDEVVQITGEVDTVRKAL 239
+ LL+ +G ++GK G +++I+ L L ++D V+ ITG D + A
Sbjct: 132 VNLLIPHHLMGYVIGKQGSRLREIEDLSAARLVAGPQQLPMSNDRVLCITGVADAIHIAT 191
Query: 240 KLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATG-------------HRD 286
+ +L P+ T P P HSV A R
Sbjct: 192 YYVGQTILTCEPK----YKNKKTIFYQPNPLHSVLVNNYGIAIQHQQHHQYHPGDKIKRS 247
Query: 287 VADIHLPMPPS------IPKFHESGVLD--------------------------RPKPSP 314
+ + +PP+ P + GV+ P+P
Sbjct: 248 KSRMSPVLPPTPNEMMLQPSHNNGGVIPIGPSGSTISNSTSAVVLPHVRIVEIMNPQPQV 307
Query: 315 EILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
+ + D VG VIGKGG I +K TGC I++ E + G +R + I G
Sbjct: 308 TPVVQEIFIEDSMVGNVIGKGGKSIAQIKGSTGCSIQISEPIPGLRERKLTIIG 361
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 82/369 (22%), Positives = 141/369 (38%), Gaps = 68/369 (18%)
Query: 314 PEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPD 373
P+ + R+LC + V+G G I +K++T I V + + +R++ + G
Sbjct: 45 PDYVHMRMLCLVKHASMVVGAKGERISRIKEDTKTRINVSDNIKNVPERVVYLRGSC--- 101
Query: 374 DRISAPQDAVLRVQTRIARAI--PDNREQT-----VMTRLLVASNQIGCLLGKGGSIIAE 426
+ V + +I+RAI D+RE + LL+ + +G ++GK GS + E
Sbjct: 102 -------EDVAKAFGKISRAINDEDDRESNERSLPLTVNLLIPHHLMGYVIGKQGSRLRE 154
Query: 427 MRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSI 486
+ LS A + + G Q+P N+ V+ I G +A+ A + + P
Sbjct: 155 IEDLSAARL-VAGPQQLPM---SNDRVLCITGVADAIHIATYYVG-----QTILTCEPKY 205
Query: 487 NRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSA 546
T Q +P S + +N+G + P D
Sbjct: 206 KN--KKTIFYQPNPLHSV----------LVNNYGIAIQHQQHHQYHP--------GDKIK 245
Query: 547 FMHHIHRPGMPPHMPDMK-----------PWGPQG--LMEVGGPMGFP-----DFVGPPH 588
P +PP +M P GP G + + P + + P
Sbjct: 246 RSKSRMSPVLPPTPNEMMLQPSHNNGGVIPIGPSGSTISNSTSAVVLPHVRIVEIMNPQP 305
Query: 589 RRVPVV----VPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQ 644
+ PVV + S+V + G+ G + QI+ + I I++P PG E + I GTP
Sbjct: 306 QVTPVVQEIFIEDSMVGNVIGKGGKSIAQIKGSTGCSIQISEPIPGLRERKLTIIGTPIG 365
Query: 645 THAAQSLIQ 653
A +I
Sbjct: 366 NQTAVMMIN 374
>gi|299116377|emb|CBN74642.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 762
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 97/454 (21%), Positives = 172/454 (37%), Gaps = 123/454 (27%)
Query: 48 FRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVS---GSDERLVVIEASDNKKET 104
++CP + +IGK G + ++ + TGV + ++ET S G+ ER V + S
Sbjct: 99 LSIMCPSDAMGMLIGKGGSGLREMQEKTGVKVSLQETKSIPEGAKERGVGLSGS------ 152
Query: 105 SENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVF 164
+ A++E+ ++ + LN+ + TS F
Sbjct: 153 -LDCVANVEK---------------------------LIFEKLNARRVTSLAPSPAEEEF 184
Query: 165 ERMVE------VEPE--TEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKLP 216
E E +EP T+V+D N + V+R ++ + G L+GKGG I+ I+
Sbjct: 185 EMAYEAAKAAGIEPNGATDVSDM-NDPNKITVVRWIMDNAHCGWLIGKGGSGIQNIEATS 243
Query: 217 TCAL-----------ASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPS 265
+ +++ +V + G AL+LI R + I G PS
Sbjct: 244 GAQVRVATERSLGKDSAERIVYVKGNKSQREAALELI---------RTNPKITGRVASPS 294
Query: 266 HPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHD 325
P +VA +H+P
Sbjct: 295 EP------------------EVAAVHVP-------------------------------S 305
Query: 326 ERVGGVIGKGGAIIRSLKQETGCDIKVMEA----VSGTEDRLIVISGPAHPDDRISAPQD 381
+ VG ++G GA I++L ++TG ++V G E R+ + GP A QD
Sbjct: 306 KAVGFILGHRGASIQALTEKTGAQLRVASGSEVTTGGGEHRVDITGGPKQIVAARHALQD 365
Query: 382 AVLRVQT-RIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGK 440
V +T P+ E T+ ++ V +G ++GKGG+ + E+ ++ ++I
Sbjct: 366 RVAEWRTSNNPNGEPEEPEYTL--KVAVPQPLVGHIIGKGGTFVREVLSVTNVQVKIQQD 423
Query: 441 DQIPKCASENEEVVLINGEFEAVQEALFQITTRL 474
P + V+++G F V A I R+
Sbjct: 424 TGSPTMWGD-ACCVMLSGTFGNVVRAQRMILERI 456
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 78/387 (20%), Positives = 141/387 (36%), Gaps = 86/387 (22%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS---GTEDRLIVISG------- 368
++C + +G +IGKGG+ +R ++++TG + + E S G ++R + +SG
Sbjct: 99 LSIMCPSDAMGMLIGKGGSGLREMQEKTGVKVSLQETKSIPEGAKERGVGLSGSLDCVAN 158
Query: 369 --------------------PAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMT--RL 406
PA + ++ ++ A + D + +T R
Sbjct: 159 VEKLIFEKLNARRVTSLAPSPAEEEFEMAYEAAKAAGIEPNGATDVSDMNDPNKITVVRW 218
Query: 407 LVASNQIGCLLGKGGSIIAEMRKLSGAYIRI-----LGKDQIPKCASENEEVVLINGEFE 461
++ + G L+GKGGS I + SGA +R+ LGKD E +V + G
Sbjct: 219 IMDNAHCGWLIGKGGSGIQNIEATSGAQVRVATERSLGKDSA-------ERIVYVKGNKS 271
Query: 462 AVQEALFQITT--RLRHHFFRDAFPSINRPLNPT----FL-----DQVSPFPSFIGRREL 510
+ AL I T ++ + P + P+ F+ + G +
Sbjct: 272 QREAALELIRTNPKITGRVASPSEPEVAAVHVPSKAVGFILGHRGASIQALTEKTGAQLR 331
Query: 511 SPPGMYSNFGPSFHKFDAVGGPPP-PGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQ 569
G G H+ D GGP + H D A + P P P+
Sbjct: 332 VASGSEVTTGGGEHRVDITGGPKQIVAARHALQDRVAEWRTSNNPNGEPEEPEYT----- 386
Query: 570 GLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITIT---- 625
+ V VP+ LV I G+ G ++++ +++ ++ I
Sbjct: 387 ---------------------LKVAVPQPLVGHIIGKGGTFVREVLSVTNVQVKIQQDTG 425
Query: 626 DPKPGATETVIIISGTPEQTHAAQSLI 652
P +++SGT AQ +I
Sbjct: 426 SPTMWGDACCVMLSGTFGNVVRAQRMI 452
Score = 46.6 bits (109), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 119/284 (41%), Gaps = 43/284 (15%)
Query: 181 NTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKLPTCALASDEV-----------VQIT 229
N K L ++ S +G L+GKGG ++++ + ++ E V ++
Sbjct: 91 NITVVKGGLSIMCPSDAMGMLIGKGGSGLREMQEKTGVKVSLQETKSIPEGAKERGVGLS 150
Query: 230 GEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVAD 289
G +D V KLI +L + R S+ +P + + + G G DV+D
Sbjct: 151 GSLDCVANVEKLIFEKL---NARRVTSLAPSPAEEEFEMAYEAAKAAGI-EPNGATDVSD 206
Query: 290 IHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCD 349
++ P +I R + + G +IGKGG+ I++++ +G
Sbjct: 207 MNDPN--------------------KITVVRWIMDNAHCGWLIGKGGSGIQNIEATSGAQ 246
Query: 350 IKVMEAVSGTED---RLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRL 406
++V S +D R++ + G + R +A + ++R +I + E V +
Sbjct: 247 VRVATERSLGKDSAERIVYVKG--NKSQREAALE--LIRTNPKITGRVASPSEPEVAA-V 301
Query: 407 LVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASEN 450
V S +G +LG G+ I + + +GA +R+ ++ E+
Sbjct: 302 HVPSKAVGFILGHRGASIQALTEKTGAQLRVASGSEVTTGGGEH 345
>gi|392344006|ref|XP_002728759.2| PREDICTED: RNA-binding protein Nova-2 [Rattus norvegicus]
Length = 576
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 89/177 (50%), Gaps = 28/177 (15%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA---VSGTEDRLIVISGPAHPDDR 375
++L G +IGKGG I L++ETG IK+ ++ GT +R+ ++ G A +
Sbjct: 119 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 178
Query: 376 ISA---------PQDA-------VLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGK 419
+ PQ +L+ QT + PD +Q +L+V ++ G ++GK
Sbjct: 179 AHSFIAEKVREIPQAMTKPEVVNILQPQTTMN---PDRAKQA---KLIVPNSTAGLIIGK 232
Query: 420 GGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRH 476
GG+ + + + SGA++++ Q P+ + E VV ++GE E V +A+ I +++
Sbjct: 233 GGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQE 286
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 591 VPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPK---PGATETVIIISGTPEQTHA 647
V + VP +LV I G+ G L + ++++ A+I I+ PG + I+G+P T A
Sbjct: 493 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQA 552
Query: 648 AQSLIQAFVMSE 659
AQ LI V E
Sbjct: 553 AQYLISQRVTYE 564
Score = 39.7 bits (91), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 403 MTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQ-IPKCASENEEVVLINGEFE 461
+ + V N +G +LGKGG + E ++L+GA I+I K + +P + N V I G
Sbjct: 492 LVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLP--GTRNRRVT-ITGSPA 548
Query: 462 AVQEALFQITTRLRHH 477
A Q A + I+ R+ +
Sbjct: 549 ATQAAQYLISQRVTYE 564
>gi|440907529|gb|ELR57670.1| RNA-binding protein Nova-2, partial [Bos grunniens mutus]
Length = 298
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 98/202 (48%), Gaps = 34/202 (16%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA---VSGTEDRLIVISGPAHPDDR 375
++L G +IGKGG I L++ETG IK+ ++ GT +R+ ++ G A +
Sbjct: 7 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 66
Query: 376 ISA---------PQDA-------VLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGK 419
+ + PQ +L+ QT + PD +Q +L+V ++ G ++GK
Sbjct: 67 VHSFIAEKVREIPQAMTKPEVVNILQPQTTMN---PDRAKQA---KLIVPNSTAGLIIGK 120
Query: 420 GGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFF 479
GG+ + + + SGA++++ Q P+ + E VV ++GE E V +A+ I +++
Sbjct: 121 GGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQED-- 175
Query: 480 RDAFPSINRPLNPTFLDQVSPF 501
P + LN ++ + P
Sbjct: 176 ----PQSSSCLNISYANVAGPV 193
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/329 (21%), Positives = 132/329 (40%), Gaps = 83/329 (25%)
Query: 186 KFVLRLLVLSTQVGCLLGKGGCVIKQIDKLPTCAL-----------ASDEVVQITGEVDT 234
++ L++L+ S G ++GKGG I Q+ K + ++ V + G +
Sbjct: 4 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 63
Query: 235 VRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPM 294
+ I+ ++ + IP T P +V +I P
Sbjct: 64 LNAVHSFIAEKVRE--------IPQAMTKP---------------------EVVNILQPQ 94
Query: 295 PPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVME 354
P DR K + +L+ + G +IGKGGA ++++ +++G +++ +
Sbjct: 95 TTMNP--------DRAKQA------KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQ 140
Query: 355 AVSGT--EDRLIVISG-PAHPDDRISA--------PQDA------VLRVQTRIARAIPDN 397
G ++R++ +SG P +SA PQ + V +A + P
Sbjct: 141 KPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLNISYANVAGPVANSNPTG 200
Query: 398 --------REQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQ-IPKCAS 448
+ + V N +G +LGKGG + E ++L+GA I+I K + +P +
Sbjct: 201 LTAEKLAAESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLP--GT 258
Query: 449 ENEEVVLINGEFEAVQEALFQITTRLRHH 477
N V I G A Q A + I+ R+ +
Sbjct: 259 RNRRVT-ITGSPAATQAAQYLISQRVTYE 286
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 110/292 (37%), Gaps = 50/292 (17%)
Query: 405 RLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRI-LGKDQIPKCASENEEVVLINGEFEAV 463
++L+ S G ++GKGG I +++K +GA I++ KD P E V L+ G EA+
Sbjct: 8 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYP---GTTERVCLVQGTAEAL 64
Query: 464 QEALFQITTRLR---HHFFRDAFPSINRP---LNPTFLDQV------SPFPSFIGRRELS 511
I ++R + +I +P +NP Q S IG+ +
Sbjct: 65 NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 124
Query: 512 PPGMYSNFGPSFH------------KFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPH 559
+ G + V G P H SA + +
Sbjct: 125 VKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPE----QVHKAVSAIVQKVQEDPQSSS 180
Query: 560 MPDMKPWGPQGLMEVGGPMGFPDFVGPPHRR---------VPVVVPRSLVPIIQGEDGAC 610
++ V GP+ + G + V + VP +LV I G+ G
Sbjct: 181 CLNIS------YANVAGPVANSNPTGLTAEKLAAESAKELVEIAVPENLVGAILGKGGKT 234
Query: 611 LKQIRQISDAKITITDPK---PGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
L + ++++ A+I I+ PG + I+G+P T AAQ LI V E
Sbjct: 235 LVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQYLISQRVTYE 286
>gi|345309017|ref|XP_001516066.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Ornithorhynchus anatinus]
Length = 679
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 78/347 (22%), Positives = 139/347 (40%), Gaps = 47/347 (13%)
Query: 311 KPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV-MEAVSGTEDRLIVISGP 369
+P P R+L + VG +IGK G I++L ++T + + + +G ++ I I
Sbjct: 266 QPKPLDFPLRILVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRKENAGAAEKPITIH-- 323
Query: 370 AHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRK 429
A P+ A + +L + + A E + ++L ++ +G L+GK G + ++ +
Sbjct: 324 ATPEGSSEACR-LILEIMQKEADETKSAEE--IPLKILAHNSLVGRLIGKEGRNLKKIEQ 380
Query: 430 LSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRP 489
+G I I + E + + G EA A +I +LR + D ++N+
Sbjct: 381 DTGTKITISPLQDL--TIYNPERTITVKGSIEACSNAEVEIMKKLREAYENDVV-AVNQQ 437
Query: 490 LNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMH 549
N I LS G++S G ++P HS ++
Sbjct: 438 AN------------LIPGLNLSALGIFSTGLSMLPSTAGPHGATAASPYNPFASHSPYLS 485
Query: 550 HIH---RPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGE 606
++ R G PH + P V + +P V I G+
Sbjct: 486 GLYGASRVGAFPHQHSV----------------------PEQEVVNLFIPTQAVGAIIGK 523
Query: 607 DGACLKQIRQISDAKITITDPK-PGATETVIIISGTPEQTHAAQSLI 652
G +KQ+ + + A I I + P A+E ++II+G PE AQ I
Sbjct: 524 KGQHIKQLARFAGASIKIAPAEGPDASERMVIITGPPEAQFKAQGRI 570
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 144/347 (41%), Gaps = 58/347 (16%)
Query: 158 KALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQID---- 213
+A L+ E M + ET+ A++ L++L ++ VG L+GK G +K+I+
Sbjct: 331 EACRLILEIMQKEADETKSAEE-------IPLKILAHNSLVGRLIGKEGRNLKKIEQDTG 383
Query: 214 -KLPTCALAS------DEVVQITGEVDTVRKALKLISHQLLDNSPRD-------HESIPG 259
K+ L + + + G ++ A I +L + D IPG
Sbjct: 384 TKITISPLQDLTIYNPERTITVKGSIEACSNAEVEIMKKLREAYENDVVAVNQQANLIPG 443
Query: 260 --------NPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPK 311
TG S LP + GA A+ + A H P + G
Sbjct: 444 LNLSALGIFSTGLSM-LPS-TAGPHGATAASPYNPFAS-HSPYLSGLYGASRVGAFPHQH 500
Query: 312 PSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPA 370
PE L + VG +IGK G I+ L + G IK+ A +R+++I+GP
Sbjct: 501 SVPEQEVVNLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAEGPDASERMVIITGPP 560
Query: 371 HPDDRISAPQDAVLRVQTRIARAIPD------NREQTVMTRLLVASNQIGCLLGKGGSII 424
+A + Q RI + + E + + V S+ G ++GKGG +
Sbjct: 561 ----------EAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIKVPSSAAGRVIGKGGKTV 610
Query: 425 AEMRKLSGAYIRILGKDQIPKCASENEEVVL-INGEFEAVQEALFQI 470
E++ L+ A + I+ +DQ P ENEEV++ I G F A Q A +I
Sbjct: 611 NELQNLTSAEV-IVPRDQTP---DENEEVIVKIIGHFFASQTAQRKI 653
>gi|395839833|ref|XP_003792780.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 5 [Otolemur garnettii]
Length = 441
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 141/317 (44%), Gaps = 45/317 (14%)
Query: 174 TEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQID-----KLPTCALAS------ 222
T +E + + L++L + VG L+GK G +K+I+ K+ +L
Sbjct: 126 TYATREEAKIAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNP 185
Query: 223 DEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYAT 282
+ + + G V+ A I +L + D ++ ++ +P ++S+ G ++T
Sbjct: 186 ERTITVKGTVEACANAEIEIMKKLREAFENDMLAV----NQQANLIPGLNLSALGI-FST 240
Query: 283 GHRDVADIHLPMPPSIPKFHESGVLDRP-KPSPEILTFRLLCHDERVGGVIGKGGAIIRS 341
G + + PPS P+ P PE L + VG +IGK GA I+
Sbjct: 241 G------LSVLPPPSGPRGAPPAAPYHPFAQYPEQEIVNLFIPTQAVGAIIGKKGAHIKQ 294
Query: 342 LKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPD---- 396
L + G IK+ A +R+++I+GP +A + Q RI + +
Sbjct: 295 LARFAGASIKIAPAEGPDVSERMVIITGPP----------EAQFKAQGRIFGKLKEENFF 344
Query: 397 --NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVV 454
E + + V S+ G ++GKGG + E++ L+ A + I+ +DQ P ENEEV+
Sbjct: 345 NPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVI 400
Query: 455 L-INGEFEAVQEALFQI 470
+ I G F A Q A +I
Sbjct: 401 VRIIGHFFASQTAQRKI 417
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 100/269 (37%), Gaps = 65/269 (24%)
Query: 385 RVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIP 444
R + +IA IP ++L + +G L+GK G + ++ +G I I +
Sbjct: 130 REEAKIAEEIP--------LKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDL- 180
Query: 445 KCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSPFPSF 504
E + + G EA A +I +LR F D ++N+ N
Sbjct: 181 -SIYNPERTITVKGTVEACANAEIEIMKKLREAFENDML-AVNQQAN------------L 226
Query: 505 IGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMK 564
I LS G++S G S PPP G P P
Sbjct: 227 IPGLNLSALGIFST-GLSVL-------PPPSG--------------------PRGAPPAA 258
Query: 565 PWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITI 624
P+ P F + P V + +P V I G+ GA +KQ+ + + A I I
Sbjct: 259 PYHP-----------FAQY--PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI 305
Query: 625 TDPK-PGATETVIIISGTPEQTHAAQSLI 652
+ P +E ++II+G PE AQ I
Sbjct: 306 APAEGPDVSERMVIITGPPEAQFKAQGRI 334
>gi|363746094|ref|XP_003643523.1| PREDICTED: poly(rC)-binding protein 4-like, partial [Gallus gallus]
Length = 239
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 82/161 (50%), Gaps = 23/161 (14%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT R+L H + +G +IGK G ++ +++++ I + E +R+ I+G
Sbjct: 19 LTLRMLMHGKEIGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGST------ 70
Query: 377 SAPQDAVLRVQTRIARAIPDNR-------EQTVMTRLLVASNQIGCLLGKGGSIIAEMRK 429
DAV R + IA + ++ V RL++ ++Q G L+GK G+ I E+R+
Sbjct: 71 ----DAVFRAVSMIAFKLEEDLGDGTAAGRTPVTLRLVIPASQCGSLIGKAGTKIREIRE 126
Query: 430 LSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
SGA +++ G D +P + E V ++G + + + + QI
Sbjct: 127 SSGAQVQVAG-DLLP---NSTERAVTVSGVPDTIIQCVRQI 163
>gi|218184511|gb|EEC66938.1| hypothetical protein OsI_33565 [Oryza sativa Indica Group]
Length = 800
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 98/249 (39%), Gaps = 39/249 (15%)
Query: 314 PEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPD 373
P FR+L +VG VIG G +R L +ET ++V+ +R ++I PD
Sbjct: 237 PGTSVFRMLIPATKVGAVIGHSGERLRRLCEETKACVRVIGGHFAAAERAVIIFAKEQPD 296
Query: 374 DRISAPQDAVLRV-QTRIARAIPDNR-EQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLS 431
+ DA+LRV + I D R V+ R+L S Q L+G GS+I ++K S
Sbjct: 297 EPKPPAIDALLRVYECTINDDGLDVRYNNIVVARILTPSEQAASLIGDQGSVINYIKKAS 356
Query: 432 GAYIRILGK--------------------------------DQIPKCASENEEVVLINGE 459
I ++G +P A E++ ++ I G
Sbjct: 357 KTNIHVIGNFLTLMHLLEPLVPSIDKFDISGLQLSIYTDADGDLPPVALEDDMIIEIWGL 416
Query: 460 FEAVQEALFQITTRLRHHFFRDAF-----PSINRPLNPTFLDQVSPFPSFIGRRELSPPG 514
V +AL + LR + + P ++ P++P + G + PG
Sbjct: 417 PARVHQALELVACHLRKYLVHRSVIPLFDPHVSIPISPVDMPPFHYSDHHEGLLHEASPG 476
Query: 515 MYSNFGPSF 523
YS + +F
Sbjct: 477 YYSLYSEAF 485
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 92/206 (44%), Gaps = 11/206 (5%)
Query: 42 FPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNK 101
+PG +FR+L P +K+ VIG GE + ++ ++T +RV + ER V+I A +
Sbjct: 236 WPGTSVFRMLIPATKVGAVIGHSGERLRRLCEETKACVRVIGGHFAAAERAVIIFAKEQP 295
Query: 102 KETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALL 161
E ++ R E ++ D+ + + +++ +L SE+ S +
Sbjct: 296 DEPKPPAIDALLRV-----YECTINDDGLDVRYNNIVVARILTP---SEQAASLIGDQGS 347
Query: 162 LVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQID-KLPTCAL 220
++ ++ +T + N + +L LV S + G + D LP AL
Sbjct: 348 VI--NYIKKASKTNIHVIGNFLTLMHLLEPLVPSIDKFDISGLQLSIYTDADGDLPPVAL 405
Query: 221 ASDEVVQITGEVDTVRKALKLISHQL 246
D +++I G V +AL+L++ L
Sbjct: 406 EDDMIIEIWGLPARVHQALELVACHL 431
>gi|393909303|gb|EJD75396.1| hypothetical protein LOAG_17442 [Loa loa]
Length = 585
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 100/201 (49%), Gaps = 34/201 (16%)
Query: 296 PSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV--- 352
P+ K H S D I+ ++L VG +IGKGG +R+LK E+GC +++
Sbjct: 41 PATKKAHVSDTED------NIVQVKVLIPSAAVGALIGKGGETMRNLKSESGCRLQMSKN 94
Query: 353 MEAVSGTEDRLIVISGPAHPDDRISAPQDAVL-RVQTRIARAIPDN------REQTVMTR 405
E GT +R+ ++ G ++S D +L +++ ++ P + E+ +
Sbjct: 95 QEVYPGTNERICLVKGKIASVLKVS---DVILEKIREKVDNNTPSDIFDHKGMERKNEMK 151
Query: 406 LLVASNQIGCLLGKGGSIIAEMRKLSGAYIRI----------LGKDQIPKCASENEEVVL 455
L+V + G ++GK G+ I E+R+ +GA I++ + +++I A+E +EV++
Sbjct: 152 LVVPNTSAGMVIGKSGARIKEIREQTGANIQVYPKAGSQEAKVSQERIITIAAEQDEVLM 211
Query: 456 INGEFEAVQEALFQITTRLRH 476
+A+Q L ++ +H
Sbjct: 212 -----DALQRVLEKVAADPQH 227
>gi|405957027|gb|EKC23265.1| Heterogeneous nuclear ribonucleoprotein K [Crassostrea gigas]
Length = 594
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 85/181 (46%), Gaps = 19/181 (10%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISA 378
R L + G +IGKGG+ I+ L+Q+ + V ++ S +R++ I +
Sbjct: 80 LRFLLASKNAGAIIGKGGSNIKRLRQDYKASVTVPDSTS--PERVLTIGA------NLGT 131
Query: 379 PQDAVLRVQTRIA-RAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRI 437
+ VL + ++ N + RLLV +Q GC++G+ G I E+R+ +GA I++
Sbjct: 132 ALECVLDIIPKLEDYKNYKNNDFDCEMRLLVHQSQAGCIIGRAGFKIKELRERTGAQIKV 191
Query: 438 LGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSI-NRPLNPTFLD 496
+ C E VV I G+ + V + + I H + A P N+P +P + D
Sbjct: 192 YSQ----CCPESTERVVAIGGKPKIVVDCIETI-----HDLLQTAPPKGPNQPYDPLYWD 242
Query: 497 Q 497
+
Sbjct: 243 E 243
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 42/62 (67%)
Query: 593 VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLI 652
V +P+ L I G+ GA +++IR+ S+A+I I + PG+ + +I I+GT EQ +AQ L+
Sbjct: 475 VTIPKDLAGAIIGKGGARIQEIRRQSNAQIVIDEGLPGSNDRIITITGTHEQIQSAQFLL 534
Query: 653 QA 654
Q+
Sbjct: 535 QS 536
Score = 42.4 bits (98), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 20/120 (16%)
Query: 160 LLLVFERMVEVEPETEVADQENTKSSKF--VLRLLVLSTQVGCLLGKGGCVIKQIDKLP- 216
L E ++++ P+ E D +N K++ F +RLLV +Q GC++G+ G IK++ +
Sbjct: 129 LGTALECVLDIIPKLE--DYKNYKNNDFDCEMRLLVHQSQAGCIIGRAGFKIKELRERTG 186
Query: 217 --------TCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPL 268
C +++ VV I G+ V ++ I H LL +P P P P PL
Sbjct: 187 AQIKVYSQCCPESTERVVAIGGKPKIVVDCIETI-HDLLQTAP------PKGPNQPYDPL 239
>gi|351697928|gb|EHB00847.1| RNA-binding protein Nova-2 [Heterocephalus glaber]
Length = 320
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 89/175 (50%), Gaps = 28/175 (16%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA---VSGTEDRLIVISGPAHPDDR 375
++L G +IGKGG I L++ETG IK+ ++ GT +R+ ++ G A +
Sbjct: 28 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 87
Query: 376 ISA---------PQDA-------VLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGK 419
+ + PQ +L+ QT + PD +Q +L+V ++ G ++GK
Sbjct: 88 VHSFIAEKVREIPQAMTKPEVVNILQPQTTMN---PDRAKQA---KLIVPNSTAGLIIGK 141
Query: 420 GGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRL 474
GG+ + + + SGA++++ Q P+ + E VV ++GE E V +A+ I +L
Sbjct: 142 GGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKL 193
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 134/329 (40%), Gaps = 76/329 (23%)
Query: 164 FERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKLPTCAL--- 220
F M E V +E ++ L++L+ S G ++GKGG I Q+ K +
Sbjct: 6 FRSMFETLKGVHVTREEE---GEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLS 62
Query: 221 --------ASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHS 272
++ V + G + + H + R+ IP T P
Sbjct: 63 KSKDFYPGTTERVCLVQGTAEALNAV-----HSFIAEKVRE---IPQAMTKP-------- 106
Query: 273 VSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVI 332
+V +I P P DR K + +L+ + G +I
Sbjct: 107 -------------EVVNILQPQTTMNP--------DRAKQA------KLIVPNSTAGLII 139
Query: 333 GKGGAIIRSLKQETGCDIKVMEAVSGT--EDRLIVISG-PAHPDDRISAPQDAVLRVQTR 389
GKGGA ++++ +++G +++ + G ++R++ +SG P +SA VQ
Sbjct: 140 GKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAVSAI------VQKL 193
Query: 390 IARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQ-IPKCAS 448
A + + + + V N +G +LGKGG + E ++L+GA I+I K + +P +
Sbjct: 194 AAESAKE------LVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLP--GT 245
Query: 449 ENEEVVLINGEFEAVQEALFQITTRLRHH 477
N V I G A Q A + I+ R+ +
Sbjct: 246 RNRRVT-ITGSPAATQAAQYLISQRVTYE 273
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 591 VPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPK---PGATETVIIISGTPEQTHA 647
V + VP +LV I G+ G L + ++++ A+I I+ PG + I+G+P T A
Sbjct: 202 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQA 261
Query: 648 AQSLIQAFVMSE 659
AQ LI V E
Sbjct: 262 AQYLISQRVTYE 273
>gi|348582424|ref|XP_003476976.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Cavia porcellus]
Length = 532
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 114/499 (22%), Positives = 184/499 (36%), Gaps = 154/499 (30%)
Query: 31 GDYSENQPSKSFPGG--------IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVE 82
GD+S + + PGG R+L P + +IGK+G + I++ T +
Sbjct: 105 GDHSSREQGHA-PGGSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRV--- 160
Query: 83 ETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSV 142
I R EN+G E V + EG+
Sbjct: 161 ----------------------------DIHRKENSGAAEKPVTIHA-------TPEGT- 184
Query: 143 LMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLL 202
+A ++ E M + ET++A++ L++L + VG L+
Sbjct: 185 --------------SEACRMILEIMQKEADETKLAEE-------IPLKILAHNGLVGRLI 223
Query: 203 GKGGCVIKQID-----KLPTCALAS------DEVVQITGEVDTVRKALKLISHQLLDNSP 251
GK G +K+I+ K+ +L + + + G V+ A I +L +
Sbjct: 224 GKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGAVEACASAEVEIMKKLREAFE 283
Query: 252 RD----HES---IPG-------------------------NPTGPSHPLPDHSVSSQGAP 279
D H+ IPG PT P HP HS
Sbjct: 284 NDMLAVHQQANLIPGLNLSALGIFSTGLSVLPPPAGPRGAPPTAPYHPFATHS------- 336
Query: 280 YATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAII 339
G+ S+ H+ G PE L + VG +IGK GA I
Sbjct: 337 ---GYFS----------SLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHI 383
Query: 340 RSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPD-- 396
+ L + G IK+ A +R+++I+GP +A + Q RI + +
Sbjct: 384 KQLARFAGASIKIAPAEGPDVSERMVIITGPP----------EAQFKAQGRIFGKLKEEN 433
Query: 397 ----NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEE 452
E + + V S+ G ++GKGG + E++ L+ A + I+ +DQ P ENEE
Sbjct: 434 FFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEE 489
Query: 453 VVL-INGEFEAVQEALFQI 470
V++ I G F A Q A +I
Sbjct: 490 VIVRIIGHFFASQTAQRKI 508
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 138/343 (40%), Gaps = 55/343 (16%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV-MEAVSGTEDRLIVISGPAHPDDRIS 377
R+L + VG +IGK G I+++ ++T + + + SG ++ + I A P+
Sbjct: 129 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIH--ATPEGTSE 186
Query: 378 APQDAVLRV------QTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLS 431
A + +L + +T++A IP ++L + +G L+GK G + ++ +
Sbjct: 187 ACR-MILEIMQKEADETKLAEEIP--------LKILAHNGLVGRLIGKEGRNLKKIEHET 237
Query: 432 GAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLN 491
G I I + E + + G EA A +I +LR F D
Sbjct: 238 GTKITISSLQDL--SIYNPERTITVKGAVEACASAEVEIMKKLREAFENDML-------- 287
Query: 492 PTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHI 551
Q + P LS G++S G PP +HP HS + +
Sbjct: 288 -AVHQQANLIPGL----NLSALGIFSTGLSVLPPPAGPRGAPPTAPYHPFATHSGYFSSL 342
Query: 552 HRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRR-VPVVVPRSLVPIIQGEDGAC 610
+ PH +GP FP P + V + +P V I G+ GA
Sbjct: 343 Y-----PH----HQFGP-----------FPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAH 382
Query: 611 LKQIRQISDAKITITDPK-PGATETVIIISGTPEQTHAAQSLI 652
+KQ+ + + A I I + P +E ++II+G PE AQ I
Sbjct: 383 IKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI 425
>gi|395839827|ref|XP_003792777.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 2 [Otolemur garnettii]
Length = 554
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 140/332 (42%), Gaps = 71/332 (21%)
Query: 158 KALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQID---- 213
+A ++ E M + ET++A++ L++L + VG L+GK G +K+I+
Sbjct: 251 EACRMILEIMQKEADETKLAEE-------IPLKILAHNGLVGRLIGKEGRNLKKIEHETG 303
Query: 214 -KLPTCALAS------DEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSH 266
K+ +L + + + G V+ A I +L + D ++ + S
Sbjct: 304 TKITISSLQDLSIYNPERTITVKGTVEACANAEIEIMKKLREAFENDMLAVNTHSGYFSS 363
Query: 267 PLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDE 326
P H S P P H S P EI+ L +
Sbjct: 364 LYPHHQFS------------------PFP-----HHHS------YPEQEIVN--LFIPTQ 392
Query: 327 RVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRISAPQDAVLR 385
VG +IGK GA I+ L + G IK+ A +R+++I+GP +A +
Sbjct: 393 AVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPP----------EAQFK 442
Query: 386 VQTRIARAIPD------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILG 439
Q RI + + E + + V S+ G ++GKGG + E++ L+ A + I+
Sbjct: 443 AQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVP 501
Query: 440 KDQIPKCASENEEVVL-INGEFEAVQEALFQI 470
+DQ P ENEEV++ I G F A Q A +I
Sbjct: 502 RDQTP---DENEEVIVRIIGHFFASQTAQRKI 530
Score = 46.6 bits (109), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 127/343 (37%), Gaps = 98/343 (28%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV-MEAVSGTEDRLIVISGPAHPDDRIS 377
R+L + VG +IGK G I+++ ++T + + + SG ++ + I A P+
Sbjct: 194 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIH--ATPEGTSE 251
Query: 378 APQDAVLRV------QTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLS 431
A + +L + +T++A IP ++L + +G L+GK G + ++ +
Sbjct: 252 ACR-MILEIMQKEADETKLAEEIP--------LKILAHNGLVGRLIGKEGRNLKKIEHET 302
Query: 432 GAYIRILGKDQIPKCASEN-EEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPL 490
G I I + + N E + + G EA A +I +LR F D ++N
Sbjct: 303 GTKITI---SSLQDLSIYNPERTITVKGTVEACANAEIEIMKKLREAFENDML-AVN--- 355
Query: 491 NPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHH 550
+ G +S S +PH S F HH
Sbjct: 356 --------------------THSGYFS-------------------SLYPHHQFSPFPHH 376
Query: 551 IHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGAC 610
P V + +P V I G+ GA
Sbjct: 377 --------------------------------HSYPEQEIVNLFIPTQAVGAIIGKKGAH 404
Query: 611 LKQIRQISDAKITITDPK-PGATETVIIISGTPEQTHAAQSLI 652
+KQ+ + + A I I + P +E ++II+G PE AQ I
Sbjct: 405 IKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI 447
>gi|148689196|gb|EDL21143.1| poly(rC) binding protein 4, isoform CRA_a [Mus musculus]
gi|148689197|gb|EDL21144.1| poly(rC) binding protein 4, isoform CRA_a [Mus musculus]
gi|148689198|gb|EDL21145.1| poly(rC) binding protein 4, isoform CRA_a [Mus musculus]
Length = 244
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 90/190 (47%), Gaps = 24/190 (12%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPA----HP 372
LT R+L H + VG +IGK G ++ +++++ I + E +R+ I+G H
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTAAVFHA 75
Query: 373 DDRISAPQDAVLRVQTRIARAIPDNREQT----VMTRLLVASNQIGCLLGKGGSIIAEMR 428
I+ D L A P N V RL++ ++Q G L+GK G+ I E+R
Sbjct: 76 VSMIAFKLDEDLC-------AAPANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIR 128
Query: 429 KLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTR-LRHH-FFRDAFPSI 486
+ +GA +++ G D +P + E V ++G +A+ + QI L HH + P
Sbjct: 129 ETTGAQVQVAG-DLLP---NSTERAVTVSGVPDAIILCVRQICAVILEHHPVSSEPLPRY 184
Query: 487 NRPL-NPTFL 495
PL P FL
Sbjct: 185 CPPLGQPGFL 194
>gi|351705765|gb|EHB08684.1| Insulin-like growth factor 2 mRNA-binding protein 3 [Heterocephalus
glaber]
Length = 546
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 110/462 (23%), Positives = 177/462 (38%), Gaps = 132/462 (28%)
Query: 39 SKSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEAS 98
S+ P + R+L P + +IGK+G + I++ T I V
Sbjct: 106 SRQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVH---------------- 149
Query: 99 DNKKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQK 158
R EN G E S+ L++ + TS K
Sbjct: 150 ---------------RKENAGAAEKSITI-------------------LSTPEGTSAACK 175
Query: 159 ALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDK---- 214
++L + + E D + T+ + L++L + VG L+GK G +K+I++
Sbjct: 176 SILEIMHK--------EAQDIKFTE--EIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDT 225
Query: 215 ------LPTCALASDE-VVQITGEVDTVRKALKLISHQLLDNSPRDHES-------IPG- 259
L L + E + + G V+T KA + I ++ ++ D S IPG
Sbjct: 226 KITISPLQELTLYNPERTITVKGSVETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGL 285
Query: 260 --NPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEIL 317
N G P + G P A M P P+F +S E
Sbjct: 286 NLNALGLFPPTSGMPPPTSGPPSA------------MTPPYPQFEQS----------ETE 323
Query: 318 TFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRI 376
T L VG +IGK G I+ L + G IK+ A + + R+++I+GP
Sbjct: 324 TVHLFIPAPSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPP------ 377
Query: 377 SAPQDAVLRVQTRIARAIPD------NREQTVMTRLLVASNQIGCLLGKGGSI------- 423
+A + Q RI I + E + + V S G ++GKGG
Sbjct: 378 ----EAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTASTSAKP 433
Query: 424 IAEMRKLSGAYIRILGKDQIPKCASENEEVVL-INGEFEAVQ 464
+ E++ LS A + ++ +DQ P EN++VV+ I G F A Q
Sbjct: 434 VNELQNLSSAEV-VVPRDQTP---DENDQVVVKITGHFYACQ 471
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 140/358 (39%), Gaps = 69/358 (19%)
Query: 305 GVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV--MEAVSGTEDR 362
G + R KP L RLL + VG +IGK GA IR++ ++T I V E E
Sbjct: 103 GSVSRQKPCD--LPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKS 160
Query: 363 LIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGS 422
+ ++S P + SA ++L + + A+ I E + ++L +N +G L+GK G
Sbjct: 161 ITILSTP----EGTSAACKSILEIMHKEAQDIKFTEE--IPLKILAHNNFVGRLIGKEGR 214
Query: 423 IIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDA 482
+ ++ + + I I ++ E + + G E +A +I ++R + D
Sbjct: 215 NLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGSVETCAKAEEEIMKKIRESYEND- 271
Query: 483 FPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHD 542
S+N L + PG+ N + F G PPP S P
Sbjct: 272 IASMN--LQAHLI-----------------PGLNLN---ALGLFPPTSGMPPPTSGPP-- 307
Query: 543 DHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPI 602
SA PP +P F V + +P V
Sbjct: 308 --SAM--------TPP---------------------YPQFEQSETETVHLFIPAPSVGA 336
Query: 603 IQGEDGACLKQIRQISDAKITITDPK-PGATETVIIISGTPEQTHAAQSLIQAFVMSE 659
I G+ G +KQ+ + + A I I + P A ++II+G PE AQ I + E
Sbjct: 337 IIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFKAQGRIYGKIKEE 394
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.135 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,271,472,627
Number of Sequences: 23463169
Number of extensions: 532338854
Number of successful extensions: 1369100
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1261
Number of HSP's successfully gapped in prelim test: 1949
Number of HSP's that attempted gapping in prelim test: 1341456
Number of HSP's gapped (non-prelim): 22673
length of query: 663
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 514
effective length of database: 8,863,183,186
effective search space: 4555676157604
effective search space used: 4555676157604
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 80 (35.4 bits)