BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045766
(663 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P58223|Y4837_ARATH KH domain-containing protein At4g18375 OS=Arabidopsis thaliana
GN=At4g18375 PE=2 SV=1
Length = 606
Score = 171 bits (433), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 181/676 (26%), Positives = 294/676 (43%), Gaps = 169/676 (25%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
+++R+LCP+ + GVIGK G++++ I +T I+V + + G +R++ I S +K+
Sbjct: 36 VVYRILCPIDVVGGVIGKSGKVINAIRHNTKAKIKVFDQLHGCSQRVITIYCSVKEKQE- 94
Query: 106 ENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFE 165
E +SEN E A Q ALL V++
Sbjct: 95 ---EIGFTKSEN---EPLCCA------------------------------QDALLKVYD 118
Query: 166 RMVEVEPETEV---ADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI---------- 212
+V + E D+++ K RLLV +Q L+GK G IK+I
Sbjct: 119 AIVASDEENNTKTNVDRDDNKE----CRLLVPFSQSSSLIGKAGENIKRIRRRTRASVKV 174
Query: 213 ------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSH 266
D CA+ D VV I+GE ++V++AL +S + +PR E+IP + T
Sbjct: 175 VSKDVSDPSHVCAMEYDNVVVISGEPESVKQALFAVSAIMYKINPR--ENIPLDSTSQDV 232
Query: 267 PLPD--------HSVSSQGAPYAT------------------------GHRDVADIHLPM 294
P +SV Q Y+ G+ + A +P+
Sbjct: 233 PAASVIVPSDLSNSVYPQTGFYSNQDHILQQGAGVPSYFNALSVSDFQGYAETAANPVPV 292
Query: 295 -PPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVM 353
S+P H G R E L F++LC + VIGKGG+ I+ +++ +G I+V
Sbjct: 293 FASSLPVTHGFGGSSRS----EELVFKVLCPLCNIMRVIGKGGSTIKRIREASGSCIEVN 348
Query: 354 EAVS--GTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASN 411
++ + G ++ +I+++ PDD S +AVL +Q I D + V +LLV+S
Sbjct: 349 DSRTKCGDDECVIIVTATESPDDMKSMAVEAVLLLQ----EYINDEDAENVKMQLLVSSK 404
Query: 412 QIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQIT 471
IGC++GK GS+I E+RK + A I I + +++V ++GE +V++AL QI
Sbjct: 405 VIGCVIGKSGSVINEIRKRTNANICI--------SKGKKDDLVEVSGEVSSVRDALIQIV 456
Query: 472 TRLRHHFF--RDAFPSIN---RPLNPTFLDQVS----PFPSFIGRRELSPPGMYSNFGPS 522
RLR +D+ + R N +FL S PSF+ M S G
Sbjct: 457 LRLREDVLGDKDSVATRKPPARTDNCSFLSGSSNAGYTLPSFM-------SSMASTSG-- 507
Query: 523 FHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPD 582
FH + GSF D+ ++ GP +
Sbjct: 508 FHGY---------GSFPAGDN---------------------------VLGSTGPYSYGR 531
Query: 583 FVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTP 642
P + +++P + + G+ G L+ IR+IS A I I+ K + + ++SGT
Sbjct: 532 L--PSSSALEILIPAHAMSKVMGKGGGNLENIRRISGAMIEISASKTSHGDHIALLSGTL 589
Query: 643 EQTHAAQSLIQAFVMS 658
EQ A++L+QAFVMS
Sbjct: 590 EQMRCAENLVQAFVMS 605
Score = 99.0 bits (245), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 155/362 (42%), Gaps = 64/362 (17%)
Query: 315 EILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAH--- 371
E++ +R+LC + VGGVIGK G +I +++ T IKV + + G R+I I
Sbjct: 34 ELVVYRILCPIDVVGGVIGKSGKVINAIRHNTKAKIKVFDQLHGCSQRVITIYCSVKEKQ 93
Query: 372 --------PDDRISAPQDAVLRVQTRIARAIPDNREQTVM-------TRLLVASNQIGCL 416
++ + QDA+L+V I + +N +T + RLLV +Q L
Sbjct: 94 EEIGFTKSENEPLCCAQDALLKVYDAIVASDEENNTKTNVDRDDNKECRLLVPFSQSSSL 153
Query: 417 LGKGGSIIAEMRKLSGAYIRILGKDQIP---KCASENEEVVLINGEFEAVQEALFQITTR 473
+GK G I +R+ + A ++++ KD CA E + VV+I+GE E+V++ALF ++
Sbjct: 154 IGKAGENIKRIRRRTRASVKVVSKDVSDPSHVCAMEYDNVVVISGEPESVKQALFAVSA- 212
Query: 474 LRHHFFRDAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPP 533
P N PL+ T D P S I +LS +Y
Sbjct: 213 ----IMYKINPRENIPLDSTSQD--VPAASVIVPSDLSNS-VY----------------- 248
Query: 534 PPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGG------------PMGFP 581
P F+ + DH + G+P + + QG E GF
Sbjct: 249 PQTGFYSNQDH--ILQ--QGAGVPSYFNALSVSDFQGYAETAANPVPVFASSLPVTHGFG 304
Query: 582 DFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDP--KPGATETVIIIS 639
V+ P + + G+ G+ +K+IR+ S + I + D K G E VII++
Sbjct: 305 GSSRSEELVFKVLCPLCNIMRVIGKGGSTIKRIREASGSCIEVNDSRTKCGDDECVIIVT 364
Query: 640 GT 641
T
Sbjct: 365 AT 366
>sp|P57722|PCBP3_MOUSE Poly(rC)-binding protein 3 OS=Mus musculus GN=Pcbp3 PE=2 SV=3
Length = 371
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 105/362 (29%), Positives = 162/362 (44%), Gaps = 62/362 (17%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R++ I+GP
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT------ 97
Query: 377 SAPQDAVLRVQTRIARAI-----------PDNREQTVMTRLLVASNQIGCLLGKGGSIIA 425
DA+ + IA P + V RL+V ++Q G L+GKGGS I
Sbjct: 98 ----DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 153
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDA-FP 484
E+R+ +GA +++ G D +P + E V I+G +A+ + + QI + + A P
Sbjct: 154 EIRESTGAQVQVAG-DMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIP 209
Query: 485 SINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGP----SFHKFDAVGGP-PPPGSFH 539
+P + + F G + + G Y+ P H+ P PP G +
Sbjct: 210 YRPKPASTPVI--------FAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTN 261
Query: 540 PHDDHSAFMHHIHRPG--MPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPR 597
P AF PG +P H + Q LM G G PP + +P
Sbjct: 262 P-----AF------PGEKLPLHSSEEA----QNLM--GQSSGLD--ASPPASTHELTIPN 302
Query: 598 SLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVM 657
L+ I G G + +IRQ+S A+I I + G++E I I+GTP AQ LI A +
Sbjct: 303 DLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARLT 362
Query: 658 SE 659
SE
Sbjct: 363 SE 364
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 111/255 (43%), Gaps = 45/255 (17%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI 212
T + KA ++ + E + +++ T LRL+V ++Q G L+GKGG IK+I
Sbjct: 97 TDAIFKAFAMIAYKFEE-DIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 155
Query: 213 ------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGN 260
D LP +++ V I+G D + + +K I +L++ P+ +IP
Sbjct: 156 RESTGAQVQVAGDMLPN---STERAVTISGTPDAIIQCVKQICVVMLESPPKG-ATIPYR 211
Query: 261 PTGPSHPL---PDHSVSSQGAPYATGHRD-------VADIHLPMPP---SIPKF------ 301
P S P+ + + QG YA H D +A P PP + P F
Sbjct: 212 PKPASTPVIFAGGQAYTIQGQ-YAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLP 270
Query: 302 -HES-------GVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVM 353
H S G SP T L ++ +G +IG+ G I ++Q +G IK+
Sbjct: 271 LHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIA 330
Query: 354 EAVSGTEDRLIVISG 368
A G+ +R I I+G
Sbjct: 331 NATEGSSERQITITG 345
Score = 37.7 bits (86), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 14/112 (12%)
Query: 401 TVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEF 460
T+ RLL+ ++G ++GK G + +MR+ SGA I I + P E +V I G
Sbjct: 45 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI-SEGNCP------ERIVTITGPT 97
Query: 461 EAVQEALFQITTRLRHHFFRDA--FPSINRPLNPTFLDQVSPFP---SFIGR 507
+A+ +A I + P+ ++P P L V P S IG+
Sbjct: 98 DAIFKAFAMIAYKFEEDIINSMSNSPATSKP--PVTLRLVVPASQCGSLIGK 147
Score = 34.3 bits (77), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 36 NQPSKSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVE-ETVSGSDERLVV 94
N P+ S P + R++ P S+ +IGK G + +I + TG ++V + + S ER V
Sbjct: 121 NSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVT 179
Query: 95 IEAS 98
I +
Sbjct: 180 ISGT 183
>sp|P57721|PCBP3_HUMAN Poly(rC)-binding protein 3 OS=Homo sapiens GN=PCBP3 PE=2 SV=2
Length = 371
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 105/362 (29%), Positives = 162/362 (44%), Gaps = 62/362 (17%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R++ I+GP
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT------ 97
Query: 377 SAPQDAVLRVQTRIARAI-----------PDNREQTVMTRLLVASNQIGCLLGKGGSIIA 425
DA+ + IA P + V RL+V ++Q G L+GKGGS I
Sbjct: 98 ----DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 153
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDA-FP 484
E+R+ +GA +++ G D +P + E V I+G +A+ + + QI + + A P
Sbjct: 154 EIRESTGAQVQVAG-DMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIP 209
Query: 485 SINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGP----SFHKFDAVGGP-PPPGSFH 539
+P + + F G + + G Y+ P H+ P PP G +
Sbjct: 210 YRPKPASTPVI--------FAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTN 261
Query: 540 PHDDHSAFMHHIHRPG--MPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPR 597
P AF PG +P H + Q LM G G PP + +P
Sbjct: 262 P-----AF------PGEKLPLHSSEEA----QNLM--GQSSGLD--ASPPASTHELTIPN 302
Query: 598 SLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVM 657
L+ I G G + +IRQ+S A+I I + G++E I I+GTP AQ LI A +
Sbjct: 303 DLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARLT 362
Query: 658 SE 659
SE
Sbjct: 363 SE 364
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 111/255 (43%), Gaps = 45/255 (17%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI 212
T + KA ++ + E + +++ T LRL+V ++Q G L+GKGG IK+I
Sbjct: 97 TDAIFKAFAMIAYKFEE-DIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 155
Query: 213 ------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGN 260
D LP +++ V I+G D + + +K I +L++ P+ +IP
Sbjct: 156 RESTGAQVQVAGDMLPN---STERAVTISGTPDAIIQCVKQICVVMLESPPKG-ATIPYR 211
Query: 261 PTGPSHPL---PDHSVSSQGAPYATGHRD-------VADIHLPMPP---SIPKF------ 301
P S P+ + + QG YA H D +A P PP + P F
Sbjct: 212 PKPASTPVIFAGGQAYTIQGQ-YAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLP 270
Query: 302 -HES-------GVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVM 353
H S G SP T L ++ +G +IG+ G I ++Q +G IK+
Sbjct: 271 LHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIA 330
Query: 354 EAVSGTEDRLIVISG 368
A G+ +R I I+G
Sbjct: 331 NATEGSSERQITITG 345
Score = 37.4 bits (85), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 14/112 (12%)
Query: 401 TVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEF 460
T+ RLL+ ++G ++GK G + +MR+ SGA I I + P E +V I G
Sbjct: 45 TLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI-SEGNCP------ERIVTITGPT 97
Query: 461 EAVQEALFQITTRLRHHFFRDA--FPSINRPLNPTFLDQVSPFP---SFIGR 507
+A+ +A I + P+ ++P P L V P S IG+
Sbjct: 98 DAIFKAFAMIAYKFEEDIINSMSNSPATSKP--PVTLRLVVPASQCGSLIGK 147
Score = 34.3 bits (77), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 36 NQPSKSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVE-ETVSGSDERLVV 94
N P+ S P + R++ P S+ +IGK G + +I + TG ++V + + S ER V
Sbjct: 121 NSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVT 179
Query: 95 IEAS 98
I +
Sbjct: 180 ISGT 183
>sp|Q15366|PCBP2_HUMAN Poly(rC)-binding protein 2 OS=Homo sapiens GN=PCBP2 PE=1 SV=1
Length = 365
Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 165/370 (44%), Gaps = 50/370 (13%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTNAIFKA 71
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I+ ++ ++ + V RL+V ++Q G L+GKGG I E+R+ +GA
Sbjct: 72 FA--MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPT 493
+++ G D +P + E + I G +++ E + QI + + + P P
Sbjct: 130 QVQVAG-DMLP---NSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPK 185
Query: 494 FLDQVSPFPSFIGRRELSPPGMYSNF---GPSFHKFDAVGGPP-----PPGSFH-PHDD- 543
SP G+ S ++F PS + GPP G + P D
Sbjct: 186 --PSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDL 243
Query: 544 ---HSAFMHHIHRP---------GMPPHMPDMKP-WGPQGLMEVGGPMGFPDFVGPPHRR 590
H M H P G+ P++K WG + H
Sbjct: 244 TKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWGLDASAQT-----------TSHE- 291
Query: 591 VPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQS 650
+ +P L+ I G GA + +IRQ+S A+I I +P G+T+ + I+G+ AQ
Sbjct: 292 --LTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQY 349
Query: 651 LIQAFVMSET 660
LI + SET
Sbjct: 350 LINVRLSSET 359
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 113/281 (40%), Gaps = 67/281 (23%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T +S+ LRL+V ++Q G L+GKGGC IK
Sbjct: 65 TNAIFKAFAMIIDKL---EEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIP 258
+I D LP + + I + K + ++ + L SP +IP
Sbjct: 122 EIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIP 181
Query: 259 GNPTGPSHPL----------------------------------PDHSVSSQGAPYATGH 284
P S P+ P + + QG YA
Sbjct: 182 YRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQ-YAIPQ 240
Query: 285 RDVADIH-LPMPPS-IPKFH-ESGVLDRPKPSPEILTF------------RLLCHDERVG 329
D+ +H L M S P H +G SPE+ + L ++ +G
Sbjct: 241 PDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWGLDASAQTTSHELTIPNDLIG 300
Query: 330 GVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPA 370
+IG+ GA I ++Q +G IK+ V G+ DR + I+G A
Sbjct: 301 CIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSA 341
Score = 34.7 bits (78), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 10/110 (9%)
Query: 401 TVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEF 460
T+ RLL+ ++G ++GK G + +MR+ SGA I I + P E ++ + G
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERIITLAGPT 65
Query: 461 EAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSPFP---SFIGR 507
A+ +A I +L S P L V P S IG+
Sbjct: 66 NAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGK 115
>sp|O19048|PCBP1_RABIT Poly(rC)-binding protein 1 OS=Oryctolagus cuniculus GN=PCBP1 PE=2
SV=1
Length = 356
Score = 89.7 bits (221), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 92/366 (25%), Positives = 158/366 (43%), Gaps = 52/366 (14%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTNAIFKA 71
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I ++ ++ + V RL+V + Q G L+GKGG I E+R+ +GA
Sbjct: 72 FAM--IIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSI-NRPLNP 492
+++ G D +P + E + I G ++V E + QI + + + P P
Sbjct: 130 QVQVAG-DMLP---NSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQP 185
Query: 493 TFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPG-------SFHPHD--- 542
+ SP G+ S Y H + GPP + P D
Sbjct: 186 --MPASSPVICAGGQDRCSDAAGYP------HATHDLEGPPLDAYSIQGQHTISPLDLAK 237
Query: 543 --------DHSAFMH-HIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPV 593
H A MH G+ P++K + + +
Sbjct: 238 LNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGY-------------WASLDASTQTTHEL 284
Query: 594 VVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQ 653
+P +L+ I G GA + +IRQ+S A+I I +P G++ + I+G+ AQ LI
Sbjct: 285 TIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLIN 344
Query: 654 AFVMSE 659
A + SE
Sbjct: 345 ARLSSE 350
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 115/275 (41%), Gaps = 63/275 (22%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T +S+ LRL+V +TQ G L+GKGGC IK
Sbjct: 65 TNAIFKAFAMIIDKL---EEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIK 121
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALK---LISHQLLDNSPRDH- 254
+I D LP +++ + I G +V + +K L+ + L SP+
Sbjct: 122 EIRESTGAQVQVAGDMLPN---STERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRV 178
Query: 255 ESIPGNPTGPSHPL-----PDHSVSSQGAPYAT--------GHRDVADIHLPMPPSIPKF 301
+IP P S P+ D + G P+AT + H P + K
Sbjct: 179 MTIPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKL 238
Query: 302 HE--------------SGVLDRPKPSPEI------------LTFRLLCHDERVGGVIGKG 335
++ +G SPE+ T L + +G +IG+
Sbjct: 239 NQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQ 298
Query: 336 GAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPA 370
GA I ++Q +G IK+ V G+ R + I+G A
Sbjct: 299 GANINEIRQMSGAQIKIANPVEGSSGRQVTITGSA 333
>sp|P60335|PCBP1_MOUSE Poly(rC)-binding protein 1 OS=Mus musculus GN=Pcbp1 PE=1 SV=1
Length = 356
Score = 89.7 bits (221), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 92/366 (25%), Positives = 158/366 (43%), Gaps = 52/366 (14%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTNAIFKA 71
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I ++ ++ + V RL+V + Q G L+GKGG I E+R+ +GA
Sbjct: 72 FAM--IIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSI-NRPLNP 492
+++ G D +P + E + I G ++V E + QI + + + P P
Sbjct: 130 QVQVAG-DMLP---NSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQP 185
Query: 493 TFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPG-------SFHPHD--- 542
+ SP G+ S Y H + GPP + P D
Sbjct: 186 --MPASSPVICAGGQDRCSDAAGYP------HATHDLEGPPLDAYSIQGQHTISPLDLAK 237
Query: 543 --------DHSAFMH-HIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPV 593
H A MH G+ P++K + + +
Sbjct: 238 LNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGY-------------WASLDASTQTTHEL 284
Query: 594 VVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQ 653
+P +L+ I G GA + +IRQ+S A+I I +P G++ + I+G+ AQ LI
Sbjct: 285 TIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLIN 344
Query: 654 AFVMSE 659
A + SE
Sbjct: 345 ARLSSE 350
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 115/275 (41%), Gaps = 63/275 (22%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T +S+ LRL+V +TQ G L+GKGGC IK
Sbjct: 65 TNAIFKAFAMIIDKL---EEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIK 121
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALK---LISHQLLDNSPRDH- 254
+I D LP +++ + I G +V + +K L+ + L SP+
Sbjct: 122 EIRESTGAQVQVAGDMLPN---STERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRV 178
Query: 255 ESIPGNPTGPSHPL-----PDHSVSSQGAPYAT--------GHRDVADIHLPMPPSIPKF 301
+IP P S P+ D + G P+AT + H P + K
Sbjct: 179 MTIPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKL 238
Query: 302 HE--------------SGVLDRPKPSPEI------------LTFRLLCHDERVGGVIGKG 335
++ +G SPE+ T L + +G +IG+
Sbjct: 239 NQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQ 298
Query: 336 GAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPA 370
GA I ++Q +G IK+ V G+ R + I+G A
Sbjct: 299 GANINEIRQMSGAQIKIANPVEGSSGRQVTITGSA 333
>sp|Q15365|PCBP1_HUMAN Poly(rC)-binding protein 1 OS=Homo sapiens GN=PCBP1 PE=1 SV=2
Length = 356
Score = 89.7 bits (221), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 92/366 (25%), Positives = 158/366 (43%), Gaps = 52/366 (14%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTNAIFKA 71
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I ++ ++ + V RL+V + Q G L+GKGG I E+R+ +GA
Sbjct: 72 FAM--IIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSI-NRPLNP 492
+++ G D +P + E + I G ++V E + QI + + + P P
Sbjct: 130 QVQVAG-DMLP---NSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQP 185
Query: 493 TFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPG-------SFHPHD--- 542
+ SP G+ S Y H + GPP + P D
Sbjct: 186 --MPASSPVICAGGQDRCSDAAGYP------HATHDLEGPPLDAYSIQGQHTISPLDLAK 237
Query: 543 --------DHSAFMH-HIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPV 593
H A MH G+ P++K + + +
Sbjct: 238 LNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGY-------------WASLDASTQTTHEL 284
Query: 594 VVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQ 653
+P +L+ I G GA + +IRQ+S A+I I +P G++ + I+G+ AQ LI
Sbjct: 285 TIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLIN 344
Query: 654 AFVMSE 659
A + SE
Sbjct: 345 ARLSSE 350
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 115/275 (41%), Gaps = 63/275 (22%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T +S+ LRL+V +TQ G L+GKGGC IK
Sbjct: 65 TNAIFKAFAMIIDKL---EEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIK 121
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALK---LISHQLLDNSPRDH- 254
+I D LP +++ + I G +V + +K L+ + L SP+
Sbjct: 122 EIRESTGAQVQVAGDMLPN---STERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRV 178
Query: 255 ESIPGNPTGPSHPL-----PDHSVSSQGAPYAT--------GHRDVADIHLPMPPSIPKF 301
+IP P S P+ D + G P+AT + H P + K
Sbjct: 179 MTIPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKL 238
Query: 302 HE--------------SGVLDRPKPSPEI------------LTFRLLCHDERVGGVIGKG 335
++ +G SPE+ T L + +G +IG+
Sbjct: 239 NQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQ 298
Query: 336 GAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPA 370
GA I ++Q +G IK+ V G+ R + I+G A
Sbjct: 299 GANINEIRQMSGAQIKIANPVEGSSGRQVTITGSA 333
>sp|Q5E9A3|PCBP1_BOVIN Poly(rC)-binding protein 1 OS=Bos taurus GN=PCBP1 PE=2 SV=1
Length = 356
Score = 89.7 bits (221), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 92/366 (25%), Positives = 158/366 (43%), Gaps = 52/366 (14%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTNAIFKA 71
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I ++ ++ + V RL+V + Q G L+GKGG I E+R+ +GA
Sbjct: 72 FAM--IIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSI-NRPLNP 492
+++ G D +P + E + I G ++V E + QI + + + P P
Sbjct: 130 QVQVAG-DMLP---NSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQP 185
Query: 493 TFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPG-------SFHPHD--- 542
+ SP G+ S Y H + GPP + P D
Sbjct: 186 --MPASSPVICAGGQDRCSDAAGYP------HATHDLEGPPLDAYSIQGQHTISPLDLAK 237
Query: 543 --------DHSAFMH-HIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPV 593
H A MH G+ P++K + + +
Sbjct: 238 LNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGY-------------WASLDASTQTTHEL 284
Query: 594 VVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQ 653
+P +L+ I G GA + +IRQ+S A+I I +P G++ + I+G+ AQ LI
Sbjct: 285 TIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLIN 344
Query: 654 AFVMSE 659
A + SE
Sbjct: 345 ARLSSE 350
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 115/275 (41%), Gaps = 63/275 (22%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T +S+ LRL+V +TQ G L+GKGGC IK
Sbjct: 65 TNAIFKAFAMIIDKL---EEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIK 121
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALK---LISHQLLDNSPRDH- 254
+I D LP +++ + I G +V + +K L+ + L SP+
Sbjct: 122 EIRESTGAQVQVAGDMLPN---STERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRV 178
Query: 255 ESIPGNPTGPSHPL-----PDHSVSSQGAPYAT--------GHRDVADIHLPMPPSIPKF 301
+IP P S P+ D + G P+AT + H P + K
Sbjct: 179 MTIPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKL 238
Query: 302 HE--------------SGVLDRPKPSPEI------------LTFRLLCHDERVGGVIGKG 335
++ +G SPE+ T L + +G +IG+
Sbjct: 239 NQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQ 298
Query: 336 GAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPA 370
GA I ++Q +G IK+ V G+ R + I+G A
Sbjct: 299 GANINEIRQMSGAQIKIANPVEGSSGRQVTITGSA 333
>sp|Q9CPN8|IF2B3_MOUSE Insulin-like growth factor 2 mRNA-binding protein 3 OS=Mus musculus
GN=Igf2bp3 PE=1 SV=1
Length = 579
Score = 73.9 bits (180), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 110/471 (23%), Positives = 192/471 (40%), Gaps = 112/471 (23%)
Query: 39 SKSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEAS 98
SK P + R+L P + +IGK+G + I++ T I
Sbjct: 189 SKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKI------------------- 229
Query: 99 DNKKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQK 158
+ R EN G E S+ L++ + TS K
Sbjct: 230 ------------DVHRKENTGAAEKSITI-------------------LSTPEGTSAACK 258
Query: 159 ALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDK---- 214
++L + + E D + T+ + L++L + VG L+GK G +K+I++
Sbjct: 259 SILEIMHK--------EAQDIKFTE--EIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDT 308
Query: 215 ------LPTCALASDE-VVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHP 267
L L + E + + G V+T KA + I ++ ++ D S+ +H
Sbjct: 309 KITISPLQELTLYNPERTITVKGSVETCAKAEEEIMKKIRESYENDIASM----NLQAHL 364
Query: 268 LPDHSVSSQGA--PYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHD 325
+P ++++ G P + + + P P+F +S E T L
Sbjct: 365 IPGLNLNALGLFPPTSGMPPPTSGPPSTLTPPYPQFEQS----------ETETVHLFIPA 414
Query: 326 ERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRISAPQDAVL 384
VG +IGK G I+ L + G IK+ A + + R+++I+GP +A
Sbjct: 415 LSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPP----------EAQF 464
Query: 385 RVQTRIARAIPD------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRIL 438
+ Q RI I + E + + V S G ++GKGG + E++ LS A + ++
Sbjct: 465 KAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQSLSSAEV-VV 523
Query: 439 GKDQIPKCASENEEVVL-INGEFEAVQEA---LFQITTRLRHHFFRDAFPS 485
+DQ P EN++VV+ I G F A Q A + +I T+++ H + A S
Sbjct: 524 PRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVKQHQQQKALQS 571
Score = 33.5 bits (75), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 593 VVVPRSLVPIIQGEDGACLKQIRQISDAKITI-TDPKPGATETVIIISGTPEQTHAA 648
++VP V I G++GA ++ I + + +KI + GA E I I TPE T AA
Sbjct: 200 LLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENTGAAEKSITILSTPEGTSAA 256
Score = 33.1 bits (74), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Query: 580 FPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPK-PGATETVIII 638
+P F V + +P V I G+ G +KQ+ + + A I I + P A ++II
Sbjct: 397 YPQFEQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVII 456
Query: 639 SGTPEQTHAAQSLIQAFVMSE 659
+G PE AQ I + E
Sbjct: 457 TGPPEAQFKAQGRIYGKIKEE 477
>sp|O00425|IF2B3_HUMAN Insulin-like growth factor 2 mRNA-binding protein 3 OS=Homo sapiens
GN=IGF2BP3 PE=1 SV=2
Length = 579
Score = 73.2 bits (178), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 117/479 (24%), Positives = 189/479 (39%), Gaps = 128/479 (26%)
Query: 39 SKSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEAS 98
SK P + R+L P + +IGK+G + I++ T I V
Sbjct: 189 SKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVH---------------- 232
Query: 99 DNKKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQK 158
R EN G E S+ L++ + TS K
Sbjct: 233 ---------------RKENAGAAEKSITI-------------------LSTPEGTSAACK 258
Query: 159 ALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDK---- 214
++L + + E D + T+ + L++L + VG L+GK G +K+I++
Sbjct: 259 SILEIMHK--------EAQDIKFTE--EIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDT 308
Query: 215 ------LPTCALASDE-VVQITGEVDTVRKALKLISHQLLDNSPRDHES-------IPG- 259
L L + E + + G V+T KA + I ++ ++ D S IPG
Sbjct: 309 KITISPLQELTLYNPERTITVKGNVETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGL 368
Query: 260 --NPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEIL 317
N G P + G P A M P P+F +S E
Sbjct: 369 NLNALGLFPPTSGMPPPTSGPPSA------------MTPPYPQFEQS----------ETE 406
Query: 318 TFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRI 376
T L VG +IGK G I+ L + G IK+ A + + R+++I+GP
Sbjct: 407 TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPP------ 460
Query: 377 SAPQDAVLRVQTRIARAIPD------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKL 430
+A + Q RI I + E + + V S G ++GKGG + E++ L
Sbjct: 461 ----EAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNL 516
Query: 431 SGAYIRILGKDQIPKCASENEEVVL-INGEFEAVQEA---LFQITTRLRHHFFRDAFPS 485
S A + ++ +DQ P EN++VV+ I G F A Q A + +I T+++ H + A S
Sbjct: 517 SSAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVKQHQQQKALQS 571
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 137/353 (38%), Gaps = 67/353 (18%)
Query: 311 KPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV--MEAVSGTEDRLIVISG 368
K P L RLL + VG +IGK GA IR++ ++T I V E E + ++S
Sbjct: 190 KQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILST 249
Query: 369 PAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMR 428
P + SA ++L + + A+ I E + ++L +N +G L+GK G + ++
Sbjct: 250 P----EGTSAACKSILEIMHKEAQDIKFTEE--IPLKILAHNNFVGRLIGKEGRNLKKIE 303
Query: 429 KLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINR 488
+ + I I ++ E + + G E +A +I ++R + D S+N
Sbjct: 304 QDTDTKITISPLQEL--TLYNPERTITVKGNVETCAKAEEEIMKKIRESYEND-IASMN- 359
Query: 489 PLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFM 548
L + PG+ N + F G PPP S P SA
Sbjct: 360 -LQAHLI-----------------PGLNLN---ALGLFPPTSGMPPPTSGPP----SAM- 393
Query: 549 HHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDG 608
PP +P F V + +P V I G+ G
Sbjct: 394 -------TPP---------------------YPQFEQSETETVHLFIPALSVGAIIGKQG 425
Query: 609 ACLKQIRQISDAKITITDPK-PGATETVIIISGTPEQTHAAQSLIQAFVMSET 660
+KQ+ + + A I I + P A ++II+G PE AQ I + E
Sbjct: 426 QHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFKAQGRIYGKIKEEN 478
>sp|Q5ZIQ3|HNRPK_CHICK Heterogeneous nuclear ribonucleoprotein K OS=Gallus gallus
GN=HNRNPK PE=2 SV=1
Length = 427
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 99/416 (23%), Positives = 155/416 (37%), Gaps = 80/416 (19%)
Query: 301 FHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTE 360
E R + + E++ R+L + G VIGKGG I++L+ + + V ++ SG E
Sbjct: 24 MEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDS-SGPE 82
Query: 361 DRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQT-----VMTRLLVASNQIGC 415
L ISA + + + +I + + + RLL+ + G
Sbjct: 83 RIL-----------SISADTETIGEILKKIIPTLEEYQHYKGSDFDCELRLLIHQSLAGG 131
Query: 416 LLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLR 475
++G G+ I E+R+ + I++ + C + VVLI G+ + V E + I +
Sbjct: 132 IIGVKGAKIKELRENTQTTIKLFQE----CCPHSTDRVVLIGGKPDRVVECIKIILDLIS 187
Query: 476 HHFFRDAFPSINRPLNPTFLDQVSPFPSF---IGRRELSPPGMYSNFGPSFHKF-DAVGG 531
+P +P F D+ + F R P G F + GG
Sbjct: 188 ES----PIKGRAQPYDPNFYDETYDYGGFTMMFDDRRGRPVGFPMRGRGGFDRMPPNRGG 243
Query: 532 PPPPGSFHPHDDHSA----------------------------------FMHHIH--RPG 555
P P S +DD S M + RPG
Sbjct: 244 RPMPPSRRDYDDMSPRRGPPPPPPGRGGRGGSRARNLPLPPPPPPRGGDLMSYDRRGRPG 303
Query: 556 -------MPPHMPDMKPWGPQGLMEVG--------GPMGFPDFVGPPHRRVPVVVPRSLV 600
M H+ P L E G G G +G P V +P+ L
Sbjct: 304 DRYDGMMMQCHVDACDDMQPPELFEGGSGYDYSYAGGRGSYGDLGGPIITTQVTIPKDLA 363
Query: 601 PIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFV 656
I G+ G +KQIR S A I I +P G+ + +I I+GT +Q AQ L+Q V
Sbjct: 364 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSV 419
Score = 40.0 bits (92), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 38/63 (60%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
I +V P +IGK G+ + QI ++G +I+++E + GS++R++ I + ++ + +
Sbjct: 352 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNA 411
Query: 106 ENL 108
+ L
Sbjct: 412 QYL 414
Score = 33.9 bits (76), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 44/81 (54%), Gaps = 8/81 (9%)
Query: 402 VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFE 461
+ T++ + + G ++GKGG I ++R SGA I+I D+ P SE+ ++ I G +
Sbjct: 352 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DE-PLEGSED-RIITITGTQD 406
Query: 462 AVQEALFQITTRLRHH---FF 479
+Q A + + ++ + FF
Sbjct: 407 QIQNAQYLLQNSVKQYSGKFF 427
Score = 33.5 bits (75), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 81/200 (40%), Gaps = 43/200 (21%)
Query: 105 SENLEASIERSENNGR------EEASVADESDNKKE--------DSVNEGSVLMDGLNSE 150
+E E + +E NG+ EE S N E S N G+V+ G +
Sbjct: 3 TEQQEETFTNTETNGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNI 62
Query: 151 KETSKVQKALLLVF-----ERMVEVEPETE------------VADQENTKSSKF--VLRL 191
K A + V ER++ + +TE + + ++ K S F LRL
Sbjct: 63 KALRTDYNASVSVPDSSGPERILSISADTETIGEILKKIIPTLEEYQHYKGSDFDCELRL 122
Query: 192 LVLSTQVGCLLGKGGCVIKQIDK---------LPTCALASDEVVQITGEVDTVRKALKLI 242
L+ + G ++G G IK++ + C ++D VV I G+ D V + +K+I
Sbjct: 123 LIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKII 182
Query: 243 SHQLLDNSPRDHESIPGNPT 262
L+ SP + P +P
Sbjct: 183 -LDLISESPIKGRAQPYDPN 201
>sp|Q61990|PCBP2_MOUSE Poly(rC)-binding protein 2 OS=Mus musculus GN=Pcbp2 PE=1 SV=1
Length = 362
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 89/157 (56%), Gaps = 11/157 (7%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT RLL H + VG +IGK G ++ +++E+G I + E +R+I ++GP + +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTNAIFKA 71
Query: 377 SAPQDAVLRVQTRIARAIPDNREQT---VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGA 433
A + +++ I+ ++ ++ + V RL+V ++Q G L+GKGG I E+R+ +GA
Sbjct: 72 FA--MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 434 YIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
+++ G D +P + E + I G +++ E + QI
Sbjct: 130 QVQVAG-DMLP---NSTERAITIAGIPQSIIECVKQI 162
Score = 60.1 bits (144), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 118/283 (41%), Gaps = 74/283 (26%)
Query: 153 TSKVQKALLLVFERMVEVEPETEVADQENTKSSK--FVLRLLVLSTQVGCLLGKGGCVIK 210
T+ + KA ++ +++ E + + +T +S+ LRL+V ++Q G L+GKGGC IK
Sbjct: 65 TNAIFKAFAMIIDKL---EEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 211 QI------------DKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPR------ 252
+I D LP +++ + I G ++ + +K I +L++ P+
Sbjct: 122 EIRESTGAQVQVAGDMLPN---STERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPY 178
Query: 253 ----------------------DHESIPG-------NPTGPSHPLPDHSVSSQGAPYATG 283
D S P NP PL +++ Q YA
Sbjct: 179 RPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQ---YAIP 235
Query: 284 HRDVADIH-LPMPPS-IPKFH-ESGVLDRPKPSPEILTF-------------RLLCHDER 327
D+ +H L M S P H +G SPE+ + L ++
Sbjct: 236 QPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDL 295
Query: 328 VGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPA 370
+G +IG+ GA I ++Q +G IK+ V G+ DR + I+G A
Sbjct: 296 IGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSA 338
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%)
Query: 593 VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLI 652
+ +P L+ I G GA + +IRQ+S A+I I +P G+T+ + I+G+ AQ LI
Sbjct: 289 LTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLI 348
Query: 653 QAFVMSET 660
+ SET
Sbjct: 349 NVRLSSET 356
Score = 41.2 bits (95), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 396 DNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVL 455
D QT L + ++ IGC++G+ G+ I E+R++SGA I+I P S + +V
Sbjct: 279 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN----PVEGSTDRQVT- 333
Query: 456 INGEFEAVQEALFQITTRL 474
I G ++ A + I RL
Sbjct: 334 ITGSAASISLAQYLINVRL 352
Score = 34.7 bits (78), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 10/110 (9%)
Query: 401 TVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEF 460
T+ RLL+ ++G ++GK G + +MR+ SGA I I + P E ++ + G
Sbjct: 13 TLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERIITLAGPT 65
Query: 461 EAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSPFP---SFIGR 507
A+ +A I +L S P L V P S IG+
Sbjct: 66 NAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGK 115
>sp|P38151|PBP2_YEAST PAB1-binding protein 2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PBP2 PE=1 SV=1
Length = 413
Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 87/387 (22%), Positives = 143/387 (36%), Gaps = 80/387 (20%)
Query: 302 HESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTED 361
H D P P + R+LC + ++G GA I +K ET I + + G +
Sbjct: 52 HSDNDHDSPDNVPSDVHLRMLCLVKHASLIVGHKGATISRIKSETSARINISNNIRGVPE 111
Query: 362 RLIVISGPAHPDDRISAPQDAVLRVQTRIARAI------PDNREQT-VMTRLLVASNQIG 414
R++ + G D V + I RA+ DN E + LL+ + +G
Sbjct: 112 RIVYVRGTC----------DDVAKAYGMIVRALLEEHGNEDNGEDIEISINLLIPHHLMG 161
Query: 415 CLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRL 474
C++GK GS + E+ LS A + +Q+ N+ ++ ING +A+ A F I+ L
Sbjct: 162 CIIGKRGSRLREIEDLSAAKL-FASPNQL---LLSNDRILTINGVPDAIHIATFYISQTL 217
Query: 475 RHHFFRDAFPSINRPL-------NPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFD 527
+ ++ R + N +D P F R
Sbjct: 218 LNFQMESPQKNVKRSIYYQPTQFNSVLIDHSQPNTIFHQRNH------------------ 259
Query: 528 AVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQ-GLMEVGGPMGF-PDFVG 585
+HP D + + +P + PQ V F P+FV
Sbjct: 260 ---------QYHPSD---KLLSYKPNKNLPISSTLLSMATPQYTTASVANATAFQPNFVI 307
Query: 586 PPHRRV--PVVVP----RSLVPIIQ--------------GEDGACLKQIRQISDAKITIT 625
P + PV+ P L+ +Q G+DG + +++ + I I
Sbjct: 308 PNVTVLDGPVISPAPGNHLLMNFVQQEIFIDEKFVGNVIGKDGKHINSVKESTGCSIIIQ 367
Query: 626 DPKPGATETVIIISGTPEQTHAAQSLI 652
DP G++E + I GT + AA LI
Sbjct: 368 DPVEGSSERRLTIRGTFMASQAAIMLI 394
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 121/292 (41%), Gaps = 73/292 (25%)
Query: 156 VQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKL 215
V KA ++ ++E E +++N + + + LL+ +GC++GK G +++I+ L
Sbjct: 123 VAKAYGMIVRALLE-----EHGNEDNGEDIEISINLLIPHHLMGCIIGKRGSRLREIEDL 177
Query: 216 PTCAL---------ASDEVVQITGEVDTVRKALKLISHQLLD---NSPRDH--ESIPGNP 261
L ++D ++ I G D + A IS LL+ SP+ + SI P
Sbjct: 178 SAAKLFASPNQLLLSNDRILTINGVPDAIHIATFYISQTLLNFQMESPQKNVKRSIYYQP 237
Query: 262 TGPSHPLPDHSVSSQGAPYATGHRDVADIH-------------LPMPPSI-----PKFHE 303
T + L DHS P H+ H LP+ ++ P++
Sbjct: 238 TQFNSVLIDHS-----QPNTIFHQRNHQYHPSDKLLSYKPNKNLPISSTLLSMATPQYTT 292
Query: 304 SGV-----------------LDRPKPSPE-----ILTF---RLLCHDERVGGVIGKGGAI 338
+ V LD P SP ++ F + ++ VG VIGK G
Sbjct: 293 ASVANATAFQPNFVIPNVTVLDGPVISPAPGNHLLMNFVQQEIFIDEKFVGNVIGKDGKH 352
Query: 339 IRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRI 390
I S+K+ TGC I + + V G+ +R + I G A Q A++ + +I
Sbjct: 353 INSVKESTGCSIIIQDPVEGSSERRLTIRGT------FMASQAAIMLISNKI 398
Score = 37.0 bits (84), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Query: 23 KEKSQKLAGDYSENQPSK--SFPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIR 80
K + K A +S+N + P + R+LC V ++G G +S+I +T I
Sbjct: 42 KRVALKDADSHSDNDHDSPDNVPSDVHLRMLCLVKHASLIVGHKGATISRIKSETSARIN 101
Query: 81 VEETVSGSDERLVVIEAS 98
+ + G ER+V + +
Sbjct: 102 ISNNIRGVPERIVYVRGT 119
Score = 35.4 bits (80), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 27/42 (64%)
Query: 57 IDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEAS 98
+ VIGKDG+ ++ + + TG +I +++ V GS ER + I +
Sbjct: 342 VGNVIGKDGKHINSVKESTGCSIIIQDPVEGSSERRLTIRGT 383
>sp|Q5SF07|IF2B2_MOUSE Insulin-like growth factor 2 mRNA-binding protein 2 OS=Mus musculus
GN=Igf2bp2 PE=1 SV=1
Length = 592
Score = 62.8 bits (151), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 93/394 (23%), Positives = 154/394 (39%), Gaps = 72/394 (18%)
Query: 268 LPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDER 327
+PD VSS P HR H P S ++ +D P R+L +
Sbjct: 155 IPDEEVSSPSPP----HRAREQGHGPGSSS-----QARQIDFP--------LRILVPTQF 197
Query: 328 VGGVIGKGGAIIRSLKQETGCDIKV-MEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRV 386
VG +IGK G I+++ ++T + + + SG ++ + I A P+ A + +L +
Sbjct: 198 VGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIH--ATPEGTSEACR-MILEI 254
Query: 387 ------QTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGK 440
+T++A +P ++L + +G L+GK G + ++ +G I I
Sbjct: 255 MQKEADETKLAEEVP--------LKILAHNGFVGRLIGKEGRNLKKIEHETGTKITISSL 306
Query: 441 DQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSP 500
+ E + + G EA A +I +LR F D ++N+ N +S
Sbjct: 307 QDL--SIYNPERTITVRGTIEACANAEIEIMKKLREAFENDML-AVNQQANLIPGLNLSA 363
Query: 501 FPSF-IGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPH 559
F G L PP GP G PP +HP HS + ++
Sbjct: 364 LGIFSTGLSVLPPPA-----GPR--------GVPPSPPYHPFATHSGYFSSLYPHHHFGP 410
Query: 560 MPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISD 619
P + P V + +P V I G+ GA +KQ+ + +
Sbjct: 411 FPHHHSY-------------------PEQETVSLFIPTQAVGAIIGKKGAHIKQLARFAG 451
Query: 620 AKITITDPK-PGATETVIIISGTPEQTHAAQSLI 652
A I I + P +E ++II+G PE AQ I
Sbjct: 452 ASIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI 485
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 106/462 (22%), Positives = 178/462 (38%), Gaps = 121/462 (26%)
Query: 48 FRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSEN 107
R+L P + +IGK+G + I++ T +
Sbjct: 189 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRV---------------------------- 220
Query: 108 LEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERM 167
I R EN+G E V + EG+ +A ++ E M
Sbjct: 221 ---DIHRKENSGAAEKPVTIHA-------TPEGT---------------SEACRMILEIM 255
Query: 168 VEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQID-----KLPTCALAS 222
+ ET++A++ L++L + VG L+GK G +K+I+ K+ +L
Sbjct: 256 QKEADETKLAEE-------VPLKILAHNGFVGRLIGKEGRNLKKIEHETGTKITISSLQD 308
Query: 223 ------DEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQ 276
+ + + G ++ A I +L + D ++ ++ +P ++S+
Sbjct: 309 LSIYNPERTITVRGTIEACANAEIEIMKKLREAFENDMLAV----NQQANLIPGLNLSAL 364
Query: 277 G--------APYATGHRDVADIHLPMPPSIPKFHESGVLD------------RPKPSPEI 316
G P G R V P PP P SG PE
Sbjct: 365 GIFSTGLSVLPPPAGPRGVP----PSPPYHPFATHSGYFSSLYPHHHFGPFPHHHSYPEQ 420
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDR 375
T L + VG +IGK GA I+ L + G IK+ A +R+++I+GP
Sbjct: 421 ETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPP----- 475
Query: 376 ISAPQDAVLRVQTRIARAIPD------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRK 429
+A + Q RI + + E + + V S+ G ++GKGG + E++
Sbjct: 476 -----EAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQN 530
Query: 430 LSGAYIRILGKDQIPKCASENEEVVL-INGEFEAVQEALFQI 470
L+ A + I+ +DQ P ENEEV++ I G F A Q A +I
Sbjct: 531 LTSAEV-IVPRDQTP---DENEEVIVRIIGHFFASQTAQRKI 568
>sp|Q3T0D0|HNRPK_BOVIN Heterogeneous nuclear ribonucleoprotein K OS=Bos taurus GN=HNRNPK
PE=2 SV=1
Length = 464
Score = 62.8 bits (151), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 97/443 (21%), Positives = 156/443 (35%), Gaps = 101/443 (22%)
Query: 301 FHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTE 360
E R + + E++ R+L + G VIGKGG I++L+ + + V ++ SG E
Sbjct: 27 MEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDS-SGPE 85
Query: 361 DRLIVISGPAH-----------------------PDDRISAPQDAVLRVQTRIARAIPDN 397
R++ IS ++ DAV + + + +
Sbjct: 86 -RILSISADIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFD 144
Query: 398 REQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLIN 457
E RLL+ + G ++G G+ I E+R+ + I++ + C + VVLI
Sbjct: 145 CE----LRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQE----CCPQSTDRVVLIG 196
Query: 458 GEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSPFPSF---IGRRELSPPG 514
G+ + V E + I + + +P +P F D+ + F R P G
Sbjct: 197 GKPDRVVECIKIILDLISESPIKGR----AQPYDPNFYDETYDYGGFTMMFDDRRGRPVG 252
Query: 515 MYSNFGPSFHKF-DAVGGPPPPGSFHPHDDHSAF-------------------------- 547
F + GG P P S +DD S
Sbjct: 253 FPMRGRGGFDRMPPGRGGRPMPPSRRDYDDMSPRRGPPPPPPGRGGRGGSRARNLPLPPP 312
Query: 548 -------MHHIHRPGMPPHMPD--------------MKPWGPQGLMEVGGPMGFPDF--- 583
+ R G P D + W P P G +
Sbjct: 313 PPPRGGDLMAYDRRGRPGDRYDGMVGFSADETWDSAIDTWSPSEWQMAYEPQGGSGYDYS 372
Query: 584 ----------VGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATE 633
+G P V +P+ L I G+ G +KQIR S A I I +P G+ +
Sbjct: 373 YAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSED 432
Query: 634 TVIIISGTPEQTHAAQSLIQAFV 656
+I I+GT +Q AQ L+Q V
Sbjct: 433 RIITITGTQDQIQNAQYLLQNSV 455
Score = 40.4 bits (93), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 38/63 (60%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
I +V P +IGK G+ + QI ++G +I+++E + GS++R++ I + ++ + +
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNA 447
Query: 106 ENL 108
+ L
Sbjct: 448 QYL 450
Score = 34.3 bits (77), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 402 VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFE 461
+ T++ + + G ++GKGG I ++R SGA I+I D+ P SE+ ++ I G +
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DE-PLEGSED-RIITITGTQD 442
Query: 462 AVQEALFQITTRLRHHFFRDAF 483
+Q A + + ++ + + F
Sbjct: 443 QIQNAQYLLQNSVKQYADVEGF 464
Score = 33.1 bits (74), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 12/99 (12%)
Query: 175 EVADQENTKSSKF--VLRLLVLSTQVGCLLGKGGCVIKQIDK---------LPTCALASD 223
E + ++ K S F LRLL+ + G ++G G IK++ + C ++D
Sbjct: 131 ECLNYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPQSTD 190
Query: 224 EVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPT 262
VV I G+ D V + +K+I L+ SP + P +P
Sbjct: 191 RVVLIGGKPDRVVECIKII-LDLISESPIKGRAQPYDPN 228
>sp|Q9Y6M1|IF2B2_HUMAN Insulin-like growth factor 2 mRNA-binding protein 2 OS=Homo sapiens
GN=IGF2BP2 PE=1 SV=2
Length = 599
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 111/501 (22%), Positives = 198/501 (39%), Gaps = 126/501 (25%)
Query: 14 DDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIM--------FRVLCPVSKIDGVIGKDG 65
D+ + P+ +++Q+ GD+S + + PGG R+L P + +IGK+G
Sbjct: 157 DEEVSSPSPPQRAQR--GDHSSREQGHA-PGGTSQARQIDFPLRILVPTQFVGAIIGKEG 213
Query: 66 EMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASV 125
+ I++ T + I R EN+G E V
Sbjct: 214 LTIKNITKQTQSRV-------------------------------DIHRKENSGAAEKPV 242
Query: 126 ADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSS 185
+ EG+ +A ++ E M + ET++A++
Sbjct: 243 TIHA-------TPEGT---------------SEACRMILEIMQKEADETKLAEE------ 274
Query: 186 KFVLRLLVLSTQVGCLLGKGGCVIKQID-----KLPTCALAS------DEVVQITGEVDT 234
L++L + VG L+GK G +K+I+ K+ +L + + + G V+
Sbjct: 275 -IPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEA 333
Query: 235 VRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVA------ 288
A I +L + D ++ ++ +P ++S+ G ++TG ++
Sbjct: 334 CASAEIEIMKKLREAFENDMLAV----NQQANLIPGLNLSALGI-FSTGLSVLSPPAGPR 388
Query: 289 -----------DIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGA 337
H S+ H+ G PE L + VG +IGK GA
Sbjct: 389 GAPPAAPYHPFTTHSGYFSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGA 448
Query: 338 IIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPD 396
I+ L + G IK+ A +R+++I+GP +A + Q RI + +
Sbjct: 449 HIKQLARFAGASIKIAPAEGPDVSERMVIITGPP----------EAQFKAQGRIFGKLKE 498
Query: 397 ------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASEN 450
E + + V S+ G ++GKGG + E++ L+ A + I+ +DQ P EN
Sbjct: 499 ENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP---DEN 554
Query: 451 EEVVL-INGEFEAVQEALFQI 470
EEV++ I G F A Q A +I
Sbjct: 555 EEVIVRIIGHFFASQTAQRKI 575
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 143/344 (41%), Gaps = 57/344 (16%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV-MEAVSGTEDRLIVISGPAHPDDRIS 377
R+L + VG +IGK G I+++ ++T + + + SG ++ + I A P+
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIH--ATPEGTSE 253
Query: 378 APQDAVLRV------QTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLS 431
A + +L + +T++A IP ++L + +G L+GK G + ++ +
Sbjct: 254 ACR-MILEIMQKEADETKLAEEIP--------LKILAHNGLVGRLIGKEGRNLKKIEHET 304
Query: 432 GAYIRILGKDQIPKCASEN-EEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPL 490
G I I + + N E + + G EA A +I +LR F D ++N+
Sbjct: 305 GTKITI---SSLQDLSIYNPERTITVKGTVEACASAEIEIMKKLREAFENDML-AVNQQA 360
Query: 491 NPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHH 550
N I LS G++S G PP +HP HS +
Sbjct: 361 N------------LIPGLNLSALGIFSTGLSVLSPPAGPRGAPPAAPYHPFTTHSGYFSS 408
Query: 551 IHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRR-VPVVVPRSLVPIIQGEDGA 609
++ PH +GP FP P + V + +P V I G+ GA
Sbjct: 409 LY-----PH----HQFGP-----------FPHHHSYPEQEIVNLFIPTQAVGAIIGKKGA 448
Query: 610 CLKQIRQISDAKITITDPK-PGATETVIIISGTPEQTHAAQSLI 652
+KQ+ + + A I I + P +E ++II+G PE AQ I
Sbjct: 449 HIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI 492
>sp|Q5R5H8|HNRPK_PONAB Heterogeneous nuclear ribonucleoprotein K OS=Pongo abelii GN=HNRNPK
PE=2 SV=1
Length = 464
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 97/443 (21%), Positives = 156/443 (35%), Gaps = 101/443 (22%)
Query: 301 FHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTE 360
E R + + E++ R+L + G VIGKGG I++L+ + + V ++ SG E
Sbjct: 27 MEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDS-SGPE 85
Query: 361 DRLIVISGPAH-----------------------PDDRISAPQDAVLRVQTRIARAIPDN 397
R++ IS ++ DAV + + + +
Sbjct: 86 -RILSISADIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFD 144
Query: 398 REQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLIN 457
E RLL+ + G ++G G+ I E+R+ + I++ + C + VVLI
Sbjct: 145 CE----LRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQE----CCPHSTDRVVLIG 196
Query: 458 GEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSPFPSF---IGRRELSPPG 514
G+ + V E + I + + +P +P F D+ + F R P G
Sbjct: 197 GKPDRVVECIKIILDLISESPIKGR----AQPYDPNFYDETYDYGGFTMMFDDRRGRPVG 252
Query: 515 MYSNFGPSFHKF-DAVGGPPPPGSFHPHDDHSAF-------------------------- 547
F + GG P P S +DD S
Sbjct: 253 FPMRGRGGFDRMPPGRGGRPMPPSRRDYDDMSPRRGPPPPPPGRGGRGGSRARNLPLPPP 312
Query: 548 -------MHHIHRPGMPPHMPD--------------MKPWGPQGLMEVGGPMGFPDF--- 583
+ R G P D + W P P G +
Sbjct: 313 PPPRGGDLMAYDRRGRPGDRYDGMVGFSADETWDSAIDTWSPSEWQMAYEPQGGSGYDYS 372
Query: 584 ----------VGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATE 633
+G P V +P+ L I G+ G +KQIR S A I I +P G+ +
Sbjct: 373 YAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSED 432
Query: 634 TVIIISGTPEQTHAAQSLIQAFV 656
+I I+GT +Q AQ L+Q V
Sbjct: 433 RIITITGTQDQIQNAQYLLQNSV 455
Score = 40.4 bits (93), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 38/63 (60%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
I +V P +IGK G+ + QI ++G +I+++E + GS++R++ I + ++ + +
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNA 447
Query: 106 ENL 108
+ L
Sbjct: 448 QYL 450
Score = 34.3 bits (77), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 402 VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFE 461
+ T++ + + G ++GKGG I ++R SGA I+I D+ P SE+ ++ I G +
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DE-PLEGSED-RIITITGTQD 442
Query: 462 AVQEALFQITTRLRHHFFRDAF 483
+Q A + + ++ + + F
Sbjct: 443 QIQNAQYLLQNSVKQYADVEGF 464
Score = 32.7 bits (73), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 12/99 (12%)
Query: 175 EVADQENTKSSKF--VLRLLVLSTQVGCLLGKGGCVIKQIDK---------LPTCALASD 223
E + ++ K S F LRLL+ + G ++G G IK++ + C ++D
Sbjct: 131 ECLNYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTD 190
Query: 224 EVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPT 262
VV I G+ D V + +K+I L+ SP + P +P
Sbjct: 191 RVVLIGGKPDRVVECIKII-LDLISESPIKGRAQPYDPN 228
>sp|Q4R4M6|HNRPK_MACFA Heterogeneous nuclear ribonucleoprotein K OS=Macaca fascicularis
GN=HNRNPK PE=2 SV=1
Length = 464
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 97/443 (21%), Positives = 156/443 (35%), Gaps = 101/443 (22%)
Query: 301 FHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTE 360
E R + + E++ R+L + G VIGKGG I++L+ + + V ++ SG E
Sbjct: 27 MEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDS-SGPE 85
Query: 361 DRLIVISGPAH-----------------------PDDRISAPQDAVLRVQTRIARAIPDN 397
R++ IS ++ DAV + + + +
Sbjct: 86 -RILSISADIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFD 144
Query: 398 REQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLIN 457
E RLL+ + G ++G G+ I E+R+ + I++ + C + VVLI
Sbjct: 145 CE----LRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQE----CCPHSTDRVVLIG 196
Query: 458 GEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSPFPSF---IGRRELSPPG 514
G+ + V E + I + + +P +P F D+ + F R P G
Sbjct: 197 GKPDRVVECIKIILDLISESPIKGR----AQPYDPNFYDETYDYGGFTMMFDDRRGRPVG 252
Query: 515 MYSNFGPSFHKF-DAVGGPPPPGSFHPHDDHSAF-------------------------- 547
F + GG P P S +DD S
Sbjct: 253 FPMRGRGGFDRMPPGRGGRPMPPSRRDYDDMSPRRGPPPPPPGRGGRGGSRARNLPLPPP 312
Query: 548 -------MHHIHRPGMPPHMPD--------------MKPWGPQGLMEVGGPMGFPDF--- 583
+ R G P D + W P P G +
Sbjct: 313 PPPRGGDLMAYDRRGRPGDRYDGMVGFSADETWDSAIDTWSPSEWQMAYEPQGGSGYDYS 372
Query: 584 ----------VGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATE 633
+G P V +P+ L I G+ G +KQIR S A I I +P G+ +
Sbjct: 373 YAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSED 432
Query: 634 TVIIISGTPEQTHAAQSLIQAFV 656
+I I+GT +Q AQ L+Q V
Sbjct: 433 RIITITGTQDQIQNAQYLLQNSV 455
Score = 40.4 bits (93), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 38/63 (60%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
I +V P +IGK G+ + QI ++G +I+++E + GS++R++ I + ++ + +
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNA 447
Query: 106 ENL 108
+ L
Sbjct: 448 QYL 450
Score = 34.3 bits (77), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 402 VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFE 461
+ T++ + + G ++GKGG I ++R SGA I+I D+ P SE+ ++ I G +
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DE-PLEGSED-RIITITGTQD 442
Query: 462 AVQEALFQITTRLRHHFFRDAF 483
+Q A + + ++ + + F
Sbjct: 443 QIQNAQYLLQNSVKQYADVEGF 464
Score = 32.7 bits (73), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 12/99 (12%)
Query: 175 EVADQENTKSSKF--VLRLLVLSTQVGCLLGKGGCVIKQIDK---------LPTCALASD 223
E + ++ K S F LRLL+ + G ++G G IK++ + C ++D
Sbjct: 131 ECLNYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTD 190
Query: 224 EVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPT 262
VV I G+ D V + +K+I L+ SP + P +P
Sbjct: 191 RVVLIGGKPDRVVECIKII-LDLISESPIKGRAQPYDPN 228
>sp|O74919|RNC1_SCHPO RNA-binding protein rnc1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=rnc1 PE=1 SV=1
Length = 398
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 132/344 (38%), Gaps = 60/344 (17%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT R L G +IGK G + L+ T V +AV DR++ ISGP R
Sbjct: 94 LTLRALLSTREAGIIIGKAGKNVAELRSTTNVKAGVTKAVPNVHDRVLTISGPLENVVRA 153
Query: 377 SAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIR 436
+ + P + RLL+A + +G ++G+ G I ++ +
Sbjct: 154 YRFIIDIFAKNSTNPDGTPSDANTPRKLRLLIAHSLMGSIIGRNGLRIKLIQDKCSCRM- 212
Query: 437 ILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLD 496
I KD +P+ E V I+G + + A+++I L + R A P+ + L
Sbjct: 213 IASKDMLPQ---STERTVEIHGTVDNLHAAIWEIGKCLIDDWERGAGTVFYNPV--SRLT 267
Query: 497 QVSPFPSFIGR---RELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHIHR 553
Q P PS +++SPP PS +A+
Sbjct: 268 Q--PLPSLASTASPQQVSPPA-----APSTTSGEAI------------------------ 296
Query: 554 PGMPPHMPDMKPWGPQGLMEVGGPMGFPD----FVGPPHRRVPVVVPRSLVPIIQGEDGA 609
P+ + G + FP F+ P + +P +V I G G+
Sbjct: 297 --------------PENFVSYGAQV-FPATQMPFLQQPKVTQNISIPADMVGCIIGRGGS 341
Query: 610 CLKQIRQISDAKITIT-DPKPGATETVIIISGTPEQTHAAQSLI 652
+ +IR+ S +KI+I +P E + I+GT E+ A L+
Sbjct: 342 KISEIRRTSGSKISIAKEPHDETGERMFTITGTHEENEKALFLL 385
Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 88/198 (44%), Gaps = 23/198 (11%)
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQIDKLPTCAL---------ASDEVVQITGEVDTVRKAL 239
LRLL+ + +G ++G+ G IK I +C + +++ V+I G VD + A+
Sbjct: 181 LRLLIAHSLMGSIIGRNGLRIKLIQDKCSCRMIASKDMLPQSTERTVEIHGTVDNLHAAI 240
Query: 240 KLISHQLLDNSPRDHESIPGNPTGP-SHPLPD-------HSVSSQGAPYATGHRDVADIH 291
I L+D+ R ++ NP + PLP VS AP T + +
Sbjct: 241 WEIGKCLIDDWERGAGTVFYNPVSRLTQPLPSLASTASPQQVSPPAAPSTTSGEAIPENF 300
Query: 292 LPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIK 351
+ + + L +PK +T + + VG +IG+GG+ I +++ +G I
Sbjct: 301 VSYGAQVFPATQMPFLQQPK-----VTQNISIPADMVGCIIGRGGSKISEIRRTSGSKIS 355
Query: 352 VM-EAVSGTEDRLIVISG 368
+ E T +R+ I+G
Sbjct: 356 IAKEPHDETGERMFTITG 373
Score = 42.7 bits (99), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 54/108 (50%), Gaps = 10/108 (9%)
Query: 367 SGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAE 426
SG A P++ +S Q A +P ++ V + + ++ +GC++G+GGS I+E
Sbjct: 292 SGEAIPENFVS------YGAQVFPATQMPFLQQPKVTQNISIPADMVGCIIGRGGSKISE 345
Query: 427 MRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRL 474
+R+ SG+ I I + E + I G E ++ALF + +L
Sbjct: 346 IRRTSGSKISIAKEPH----DETGERMFTITGTHEENEKALFLLYQQL 389
>sp|Q9UNW9|NOVA2_HUMAN RNA-binding protein Nova-2 OS=Homo sapiens GN=NOVA2 PE=1 SV=1
Length = 492
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 90/177 (50%), Gaps = 28/177 (15%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA---VSGTEDRLIVISGPAHPDDR 375
++L G +IGKGG I L++ETG IK+ ++ GT +R+ ++ G A +
Sbjct: 35 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 94
Query: 376 ISA---------PQDA-------VLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGK 419
+ + PQ +L+ QT + PD +Q +L+V ++ G ++GK
Sbjct: 95 VHSFIAEKVREIPQAMTKPEVVNILQPQTTMN---PDRAKQA---KLIVPNSTAGLIIGK 148
Query: 420 GGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRH 476
GG+ + + + SGA++++ Q P+ + E VV ++GE E V +A+ I +++
Sbjct: 149 GGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQE 202
Score = 40.4 bits (93), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 591 VPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPK---PGATETVIIISGTPEQTHA 647
V + VP +LV I G+ G L + ++++ A+I I+ PG + I+G+P T A
Sbjct: 409 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQA 468
Query: 648 AQSLIQAFVMSE 659
AQ LI V E
Sbjct: 469 AQYLISQRVTYE 480
Score = 39.3 bits (90), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 403 MTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQ-IPKCASENEEVVLINGEFE 461
+ + V N +G +LGKGG + E ++L+GA I+I K + +P + N V I G
Sbjct: 408 LVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLP--GTRNRRVT-ITGSPA 464
Query: 462 AVQEALFQITTRLRHH 477
A Q A + I+ R+ +
Sbjct: 465 ATQAAQYLISQRVTYE 480
Score = 38.5 bits (88), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 589 RRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGAT--ETVIIISGTPEQTH 646
++ ++VP S +I G+ GA +K + + S A + ++ G E V+ +SG PEQ H
Sbjct: 131 KQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVH 190
Query: 647 AAQSLI 652
A S I
Sbjct: 191 KAVSAI 196
Score = 35.8 bits (81), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 104/252 (41%), Gaps = 62/252 (24%)
Query: 44 GGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEET---VSGSDERLVVIEASDN 100
G +VL P +IGK G+ + Q+ ++TG TI++ ++ G+ ER+ +++
Sbjct: 31 GEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQG--- 87
Query: 101 KKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKAL 160
T+E L A RE K + VN
Sbjct: 88 ---TAEALNAVHSFIAEKVREIPQAMT-----KPEVVN---------------------- 117
Query: 161 LLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIK---------- 210
++P+T + + + K +K + V ++ G ++GKGG +K
Sbjct: 118 --------ILQPQTTM-NPDRAKQAKLI----VPNSTAGLIIGKGGATVKAVMEQSGAWV 164
Query: 211 QIDKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPD 270
Q+ + P + VV ++GE + V KA+ I ++ ++ P+ + + + P+ +
Sbjct: 165 QLSQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQED-PQSSSCLNISYANVAGPVAN 223
Query: 271 HSVSSQGAPYAT 282
+ + G+PYA+
Sbjct: 224 SNPT--GSPYAS 233
Score = 33.5 bits (75), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 593 VVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPK---PGATETVIIISGTPEQTHAAQ 649
V++P I G+ G + Q+++ + A I ++ K PG TE V ++ GT E +A
Sbjct: 37 VLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAVH 96
Query: 650 SLI 652
S I
Sbjct: 97 SFI 99
>sp|Q5RB68|IF2B2_PONAB Insulin-like growth factor 2 mRNA-binding protein 2 OS=Pongo abelii
GN=IGF2BP2 PE=2 SV=1
Length = 556
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 110/484 (22%), Positives = 188/484 (38%), Gaps = 135/484 (27%)
Query: 14 DDNHTEPNGKEKSQKLAGDYSENQPSKSFPGGIM--------FRVLCPVSKIDGVIGKDG 65
D+ + P+ +++Q+ GD+S + + PGG R+L P + +IGK+G
Sbjct: 157 DEEVSSPSPPQRAQR--GDHSSREQGHA-PGGTSQARQIDFPLRILVPTQFVGAIIGKEG 213
Query: 66 EMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSENLEASIERSENNGREEASV 125
+ I++ T + I R EN+G E V
Sbjct: 214 LTIKNITKQTQSRV-------------------------------DIHRKENSGAAEKPV 242
Query: 126 ADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKALLLVFERMVEVEPETEVADQENTKSS 185
+ EG+ +A ++ E M + ET++A++
Sbjct: 243 TIHA-------TPEGT---------------SEACRMILEIMQKEADETKLAEE------ 274
Query: 186 KFVLRLLVLSTQVGCLLGKGGCVIKQID-----KLPTCALAS------DEVVQITGEVDT 234
L++L + VG L+GK G +K+I+ K+ +L + + + G V+
Sbjct: 275 -IPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGTVEA 333
Query: 235 VRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPM 294
A I +L + D ++ + S P H Q P+
Sbjct: 334 CASAEIEIMKKLREAFENDMLAVNTHSGYFSSLYPHH----QFGPF-------------- 375
Query: 295 PPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVME 354
P H P EI+ L + VG +IGK GA I+ L + G IK+
Sbjct: 376 ----PHHHSY-------PEQEIVN--LFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAP 422
Query: 355 AVS-GTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPD------NREQTVMTRLL 407
A +R+++I+GP +A + Q RI + + E + +
Sbjct: 423 AEGPDVSERMVIITGPP----------EAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIR 472
Query: 408 VASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVL-INGEFEAVQEA 466
V S+ G ++GKGG + E++ L+ A + I+ +DQ P ENEEV++ I G F A Q A
Sbjct: 473 VPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVIVRIIGHFFASQTA 528
Query: 467 LFQI 470
+I
Sbjct: 529 QRKI 532
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 72/342 (21%), Positives = 126/342 (36%), Gaps = 96/342 (28%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV-MEAVSGTEDRLIVISGPAHPDDRIS 377
R+L + VG +IGK G I+++ ++T + + + SG ++ + I A P+
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIH--ATPEGTSE 253
Query: 378 APQDAVLRV------QTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLS 431
A + +L + +T++A IP ++L + +G L+GK G + ++ +
Sbjct: 254 ACR-MILEIMQKEADETKLAEEIP--------LKILAHNGLVGRLIGKEGRNLKKIEHET 304
Query: 432 GAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLN 491
G I I + E + + G EA A +I +LR F D ++N
Sbjct: 305 GTKITISSLQDL--SIYNPERTITVKGTVEACASAEIEIMKKLREAFENDML-AVN---- 357
Query: 492 PTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSAFMHHI 551
+ G +S S +PH F HH
Sbjct: 358 -------------------THSGYFS-------------------SLYPHHQFGPFPHH- 378
Query: 552 HRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACL 611
+P+ V + +P V I G+ GA +
Sbjct: 379 --------------------------HSYPE-----QEIVNLFIPTQAVGAIIGKKGAHI 407
Query: 612 KQIRQISDAKITITDPK-PGATETVIIISGTPEQTHAAQSLI 652
KQ+ + + A I I + P +E ++II+G PE AQ I
Sbjct: 408 KQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI 449
>sp|Q0VCU0|PCBP4_BOVIN Poly(rC)-binding protein 4 OS=Bos taurus GN=PCBP4 PE=2 SV=1
Length = 403
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 82/161 (50%), Gaps = 19/161 (11%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT R+L H + VG +IGK G ++ +++++ I + E +R+ I+G
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITG------ST 69
Query: 377 SAPQDAVLRVQTRIAR---AIPDNREQT----VMTRLLVASNQIGCLLGKGGSIIAEMRK 429
+A AV + ++ A P N V RL++ ++Q G L+GK G+ I E+R+
Sbjct: 70 AAVFHAVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE 129
Query: 430 LSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
+GA +++ G D +P + E V ++G +A+ + QI
Sbjct: 130 TTGAQVQVAG-DLLP---NSTERAVTVSGVPDAIILCVRQI 166
Score = 53.1 bits (126), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 75/358 (20%), Positives = 132/358 (36%), Gaps = 118/358 (32%)
Query: 178 DQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKLPTCALASDE------VVQITGE 231
++E S LR+L+ +VG ++GK G +K+I + + + E + ITG
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGS 68
Query: 232 VDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIH 291
V A+ +I+ +L + D + P N
Sbjct: 69 TAAVFHAVSMIAFKLDE----DLCAAPAN------------------------------- 93
Query: 292 LPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIK 351
G + RP +T RL+ + G +IGK G I+ +++ TG ++
Sbjct: 94 ------------GGNVSRPP-----VTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQ 136
Query: 352 VM-EAVSGTEDRLIVISG--------------------------PAHPDDRI-------- 376
V + + + +R + +SG P HP +
Sbjct: 137 VAGDLLPNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSTN 196
Query: 377 ----------SAPQDAVLRVQTRIARAIP----------DNREQTVMTRLLVASNQIGCL 416
+ V ++Q A+P D QT LV ++ IGC+
Sbjct: 197 QGFSVQGQYGTVTPAEVTKLQQLSGHAVPFASPSMVPGLDPSTQTSSQEFLVPNDLIGCV 256
Query: 417 LGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRL 474
+G+ GS I+E+R++SGA+I+I + + E V I G ++ A + IT L
Sbjct: 257 IGRQGSKISEIRQMSGAHIKIGNQAE-----GAGERHVTITGSPVSIALAQYLITACL 309
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 93/207 (44%), Gaps = 20/207 (9%)
Query: 177 ADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI------------DKLPTCALASDE 224
A+ N LRL++ ++Q G L+GK G IK+I D LP +++
Sbjct: 92 ANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPN---STER 148
Query: 225 VVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPT---GPSHPLPDHSVSSQGAPYA 281
V ++G D + ++ I +L++ P+ +IP +P+ G + S QG
Sbjct: 149 AVTVSGVPDAIILCVRQICAVILESPPKG-ATIPYHPSLSLGTVLLSTNQGFSVQGQYGT 207
Query: 282 TGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRS 341
+V + ++P F ++ PS + + L ++ +G VIG+ G+ I
Sbjct: 208 VTPAEVTKLQQLSGHAVP-FASPSMVPGLDPSTQTSSQEFLVPNDLIGCVIGRQGSKISE 266
Query: 342 LKQETGCDIKVMEAVSGTEDRLIVISG 368
++Q +G IK+ G +R + I+G
Sbjct: 267 IRQMSGAHIKIGNQAEGAGERHVTITG 293
Score = 41.2 bits (95), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%)
Query: 594 VVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQ 653
+VP L+ + G G+ + +IRQ+S A I I + GA E + I+G+P AQ LI
Sbjct: 247 LVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYLIT 306
Query: 654 AFVMSETETT 663
A + + T+
Sbjct: 307 ACLETAKSTS 316
>sp|P57723|PCBP4_HUMAN Poly(rC)-binding protein 4 OS=Homo sapiens GN=PCBP4 PE=2 SV=1
Length = 403
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 82/161 (50%), Gaps = 19/161 (11%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT R+L H + VG +IGK G ++ +++++ I + E +R+ I+G
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITG------ST 69
Query: 377 SAPQDAVLRVQTRIAR---AIPDNREQT----VMTRLLVASNQIGCLLGKGGSIIAEMRK 429
+A AV + ++ A P N V RL++ ++Q G L+GK G+ I E+R+
Sbjct: 70 AAVFHAVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE 129
Query: 430 LSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
+GA +++ G D +P + E V ++G +A+ + QI
Sbjct: 130 TTGAQVQVAG-DLLP---NSTERAVTVSGVPDAIILCVRQI 166
Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 78/358 (21%), Positives = 135/358 (37%), Gaps = 118/358 (32%)
Query: 178 DQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKLPTCALASDE------VVQITGE 231
++E S LR+L+ +VG ++GK G +K+I + + + E + ITG
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGS 68
Query: 232 VDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIH 291
V A+ +I+ +L + D + P N
Sbjct: 69 TAAVFHAVSMIAFKLDE----DLCAAPAN------------------------------- 93
Query: 292 LPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIK 351
G + RP +T RL+ + G +IGK G I+ +++ TG ++
Sbjct: 94 ------------GGNVSRPP-----VTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQ 136
Query: 352 VM-EAVSGTEDRLIVISG--------------------------PAHPDDRI-----SAP 379
V + + + +R + +SG P HP + SA
Sbjct: 137 VAGDLLPNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSAN 196
Query: 380 QD-------------AVLRVQTRIARAIP----------DNREQTVMTRLLVASNQIGCL 416
Q V ++Q + A+P D QT LV ++ IGC+
Sbjct: 197 QGFSVQGQYGAVTPAEVTKLQQLSSHAVPFATPSVVPGLDPGTQTSSQEFLVPNDLIGCV 256
Query: 417 LGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRL 474
+G+ GS I+E+R++SGA+I+I + + E V I G ++ A + IT L
Sbjct: 257 IGRQGSKISEIRQMSGAHIKIGNQAE-----GAGERHVTITGSPVSIALAQYLITACL 309
Score = 52.8 bits (125), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 93/207 (44%), Gaps = 20/207 (9%)
Query: 177 ADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQI------------DKLPTCALASDE 224
A+ N LRL++ ++Q G L+GK G IK+I D LP +++
Sbjct: 92 ANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPN---STER 148
Query: 225 VVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPT---GPSHPLPDHSVSSQGAPYA 281
V ++G D + ++ I +L++ P+ +IP +P+ G + S QG A
Sbjct: 149 AVTVSGVPDAIILCVRQICAVILESPPKG-ATIPYHPSLSLGTVLLSANQGFSVQGQYGA 207
Query: 282 TGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRS 341
+V + ++P F V+ P + + L ++ +G VIG+ G+ I
Sbjct: 208 VTPAEVTKLQQLSSHAVP-FATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISE 266
Query: 342 LKQETGCDIKVMEAVSGTEDRLIVISG 368
++Q +G IK+ G +R + I+G
Sbjct: 267 IRQMSGAHIKIGNQAEGAGERHVTITG 293
Score = 41.2 bits (95), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%)
Query: 594 VVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQ 653
+VP L+ + G G+ + +IRQ+S A I I + GA E + I+G+P AQ LI
Sbjct: 247 LVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYLIT 306
Query: 654 AFVMSETETT 663
A + + T+
Sbjct: 307 ACLETAKSTS 316
>sp|P57724|PCBP4_MOUSE Poly(rC)-binding protein 4 OS=Mus musculus GN=Pcbp4 PE=2 SV=1
Length = 403
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 82/161 (50%), Gaps = 19/161 (11%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
LT R+L H + VG +IGK G ++ +++++ I + E +R+ I+G
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITG------ST 69
Query: 377 SAPQDAVLRVQTRIAR---AIPDNREQT----VMTRLLVASNQIGCLLGKGGSIIAEMRK 429
+A AV + ++ A P N V RL++ ++Q G L+GK G+ I E+R+
Sbjct: 70 AAVFHAVSMIAFKLDEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE 129
Query: 430 LSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQI 470
+GA +++ G D +P + E V ++G +A+ + QI
Sbjct: 130 TTGAQVQVAG-DLLP---NSTERAVTVSGVPDAIILCVRQI 166
Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 77/352 (21%), Positives = 131/352 (37%), Gaps = 118/352 (33%)
Query: 184 SSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKLPTCALASDE------VVQITGEVDTVRK 237
S LR+L+ +VG ++GK G +K+I + + + E + ITG V
Sbjct: 15 SITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFH 74
Query: 238 ALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPS 297
A+ +I+ +L + D + P N
Sbjct: 75 AVSMIAFKLDE----DLCAAPAN------------------------------------- 93
Query: 298 IPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVM-EAV 356
G + RP +T RL+ + G +IGK G I+ +++ TG ++V + +
Sbjct: 94 ------GGSVSRPP-----VTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLL 142
Query: 357 SGTEDRLIVISG--------------------------PAHPDDRI-----SAPQD---- 381
+ +R + +SG P HP + SA Q
Sbjct: 143 PNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQ 202
Query: 382 ---------AVLRVQTRIARAIP----------DNREQTVMTRLLVASNQIGCLLGKGGS 422
V ++Q A+P D QT LV ++ IGC++G+ GS
Sbjct: 203 GQYGAVTPAEVTKLQQLSGHAVPFASPSVVPGMDPSTQTSSQEFLVPNDLIGCVIGRQGS 262
Query: 423 IIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRL 474
I+E+R++SGA+I+I + + E V I G ++ A + IT L
Sbjct: 263 KISEIRQMSGAHIKIGNQAE-----GAGERHVTITGSPVSIALAQYLITACL 309
Score = 41.2 bits (95), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%)
Query: 594 VVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQ 653
+VP L+ + G G+ + +IRQ+S A I I + GA E + I+G+P AQ LI
Sbjct: 247 LVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYLIT 306
Query: 654 AFVMSETETT 663
A + + T+
Sbjct: 307 ACLETAKSTS 316
>sp|O42254|IF2B1_CHICK Insulin-like growth factor 2 mRNA-binding protein 1 OS=Gallus
gallus GN=IGF2BP1 PE=1 SV=1
Length = 576
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 134/355 (37%), Gaps = 72/355 (20%)
Query: 311 KPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV--MEAVSGTEDRLIVISG 368
K P + RLL + VG +IGK GA IR++ ++T I V E E + + S
Sbjct: 190 KQQPVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISIHST 249
Query: 369 PAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMR 428
P + SA +L + + A+ E V ++L +N +G L+GK G + ++
Sbjct: 250 P----EGCSAACKMILEIMQKEAKDTKTADE--VPLKILAHNNFVGRLIGKEGRNLKKVE 303
Query: 429 KLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRD-AFPSIN 487
+ + I I + E + + G E +A +I ++R + D A S+
Sbjct: 304 QDTETKITISSLQDL--TLYNPERTITVKGSIENCCKAEQEIMKKVREAYENDVAAMSLQ 361
Query: 488 RPLNPTF-LDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFDAVGGPPPPGSFHPHDDHSA 546
L P L V FP+ +AV PPPP S
Sbjct: 362 SHLIPGLNLAAVGLFPA---------------------SSNAV--PPPPSS--------- 389
Query: 547 FMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGE 606
V G + F+ P V V +P V I G+
Sbjct: 390 ---------------------------VSGAAPYSSFMPPEQETVHVFIPAQAVGAIIGK 422
Query: 607 DGACLKQIRQISDAKITITDPK-PGATETVIIISGTPEQTHAAQSLIQAFVMSET 660
G +KQ+ + + A I I P+ P + +++I+G PE AQ I + E
Sbjct: 423 KGQHIKQLSRFASASIKIAPPETPDSKVRMVVITGPPEAQFKAQGRIYGKLKEEN 477
>sp|O57526|IF23B_XENLA Insulin-like growth factor 2 mRNA-binding protein 3-B OS=Xenopus
laevis GN=igf2bp3-b PE=1 SV=1
Length = 593
Score = 57.4 bits (137), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 140/319 (43%), Gaps = 54/319 (16%)
Query: 179 QENTKSSKFV----LRLLVLSTQVGCLLGKGGCVIKQIDK----------LPTCALASDE 224
Q+ + +KF L++L + VG L+GK G +K+I++ L L + E
Sbjct: 274 QKEAQDTKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQDLTLYNPE 333
Query: 225 -VVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQG---APY 280
+ + G ++T KA + + ++ ++ D ++ +H +P ++++ G
Sbjct: 334 RTITVKGSIETCAKAEEEVMKKIRESYENDIAAM----NLQAHLIPGLNLNALGLFPPSS 389
Query: 281 ATGHRDVADIHLPM-PPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAII 339
+ A + P S P F + PE T L VG +IGK G I
Sbjct: 390 SGMPPPSAGVSSPTTSASYPPFGQQ---------PESETVHLFIPALAVGAIIGKQGQHI 440
Query: 340 RSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPD-- 396
+ L + G IK+ A + R+++I+GP +A + Q RI + +
Sbjct: 441 KQLSRFAGASIKIAPAEGPDAKLRMVIITGPP----------EAQFKAQGRIYGKLKEEN 490
Query: 397 ----NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEE 452
E + + V S G ++GKGG + E++ L+ A + ++ +DQ P EN++
Sbjct: 491 FFGPKEEVKLEAHIKVPSYAAGRVIGKGGKTVNELQNLTSAEV-VVPRDQTP---DENDQ 546
Query: 453 VVL-INGEFEAVQEALFQI 470
VV+ I G F A Q A +I
Sbjct: 547 VVVKITGHFYASQLAQRKI 565
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 79/179 (44%), Gaps = 11/179 (6%)
Query: 305 GVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQET--GCDIKVMEAVSGTEDR 362
G RPKP E+ R+L + VG +IGK GA IR++ ++T DI E E
Sbjct: 194 GAAARPKPQSEV-PLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKP 252
Query: 363 LIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGS 422
+ + S P + SA ++ + + A+ E + ++L +N +G L+GK G
Sbjct: 253 ITIHSTP----EGCSAACKIIMEIMQKEAQDTKFTEE--IPLKILAHNNFVGRLIGKEGR 306
Query: 423 IIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRD 481
+ ++ + + I I + E + + G E +A ++ ++R + D
Sbjct: 307 NLKKIEQDTDTKITISPLQDL--TLYNPERTITVKGSIETCAKAEEEVMKKIRESYEND 363
Score = 37.7 bits (86), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 587 PHRRVPV--VVPRSLVPIIQGEDGACLKQIRQISDAKITI-TDPKPGATETVIIISGTPE 643
P VP+ +VP V I G++GA ++ I + + +KI I GA E I I TPE
Sbjct: 201 PQSEVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHSTPE 260
Query: 644 QTHAAQSLIQAFVMSETETT 663
AA +I + E + T
Sbjct: 261 GCSAACKIIMEIMQKEAQDT 280
>sp|Q2PFW9|NOVA1_MACFA RNA-binding protein Nova-1 OS=Macaca fascicularis GN=NOVA1 PE=2
SV=1
Length = 483
Score = 57.0 bits (136), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 89/177 (50%), Gaps = 28/177 (15%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA---VSGTEDRLIVISGPAHPDDR 375
++L G +IGKGG I L++ETG IK+ ++ GT +R+ +I G +
Sbjct: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNA 111
Query: 376 ISA---------PQD-------AVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGK 419
+ PQ+ ++L+ QT + PD +Q +++V ++ G ++GK
Sbjct: 112 VHGFIAEKIREMPQNVAKTEPVSILQPQTTVN---PDRIKQ---VKIIVPNSTAGLIIGK 165
Query: 420 GGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRH 476
GG+ + + + SGA++++ Q P + E VV ++GE E ++A+ I +++
Sbjct: 166 GGATVKAIMEQSGAWVQL---SQKPDGINLQERVVTVSGEPEQNRKAVELIIQKIQE 219
Score = 41.2 bits (95), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 591 VPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPK---PGATETVIIISGTPEQTHA 647
V + VP +LV I G+ G L + ++++ A+I I+ PG + I+GTP T A
Sbjct: 400 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQA 459
Query: 648 AQSLIQAFVMSE 659
AQ LI + E
Sbjct: 460 AQYLITQRITYE 471
Score = 41.2 bits (95), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 403 MTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQ-IPKCASENEEVVLINGEFE 461
+ + V N +G +LGKGG + E ++L+GA I+I K + +P + N +V I G
Sbjct: 399 VVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVP--GTRNRKVT-ITGTPA 455
Query: 462 AVQEALFQITTRLRHH 477
A Q A + IT R+ +
Sbjct: 456 ATQAAQYLITQRITYE 471
Score = 39.7 bits (91), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 106/258 (41%), Gaps = 76/258 (29%)
Query: 44 GGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEET---VSGSDERLVVIEASDN 100
G +VL P +IGK G+ + Q+ ++TG TI++ ++ G+ ER+ +I+
Sbjct: 48 GQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQG--- 104
Query: 101 KKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKAL 160
T E L A + G +EK +
Sbjct: 105 ---TVEALNA---------------------------------VHGFIAEK--------I 120
Query: 161 LLVFERMVEVEPETEVADQENTKSSKFV-LRLLVLSTQVGCLLGKGGCVIK--------- 210
+ + + + EP + + Q + ++++V ++ G ++GKGG +K
Sbjct: 121 REMPQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAW 180
Query: 211 -QIDKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIP---GNPTGP-- 264
Q+ + P + VV ++GE + RKA++LI ++ ++ P+ + N TGP
Sbjct: 181 VQLSQKPDGINLQERVVTVSGEPEQNRKAVELIIQKIQED-PQSGSCLNISYANVTGPVA 239
Query: 265 -SHPLPDHSVSSQGAPYA 281
S+P G+PYA
Sbjct: 240 NSNP--------TGSPYA 249
Score = 38.5 bits (88), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 589 RRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGAT--ETVIIISGTPEQTH 646
++V ++VP S +I G+ GA +K I + S A + ++ G E V+ +SG PEQ
Sbjct: 148 KQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNR 207
Query: 647 AAQSLI 652
A LI
Sbjct: 208 KAVELI 213
Score = 37.7 bits (86), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 100/228 (43%), Gaps = 41/228 (17%)
Query: 165 ERMVEVEPETEVADQENT-KSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKLPTCALASD 223
+R +E PE + NT + ++ L++L+ S G ++GKGG I Q+ K
Sbjct: 27 KRPLEAPPEAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKE-------- 78
Query: 224 EVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATG 283
TG + K+ D P E + L +V + A
Sbjct: 79 -----TGATIKLSKSK--------DFYPGTTERVC---------LIQGTVEALNAV---- 112
Query: 284 HRDVADIHLPMPPSIPKFHESGVLD-RPKPSPE-ILTFRLLCHDERVGGVIGKGGAIIRS 341
H +A+ MP ++ K +L + +P+ I +++ + G +IGKGGA +++
Sbjct: 113 HGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAGLIIGKGGATVKA 172
Query: 342 LKQETGCDIKVMEAVSGT--EDRLIVISGPAHPDDRISAPQDAVLRVQ 387
+ +++G +++ + G ++R++ +SG P+ A + + ++Q
Sbjct: 173 IMEQSGAWVQLSQKPDGINLQERVVTVSG--EPEQNRKAVELIIQKIQ 218
>sp|O73932|IF23A_XENLA Insulin-like growth factor 2 mRNA-binding protein 3-A OS=Xenopus
laevis GN=igf2bp3-a PE=1 SV=1
Length = 594
Score = 56.2 bits (134), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 79/165 (47%), Gaps = 22/165 (13%)
Query: 314 PEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHP 372
PE T L VG +IGK G I+ L + G IK+ A + R+++I+GP
Sbjct: 416 PESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMVIITGPP-- 473
Query: 373 DDRISAPQDAVLRVQTRIARAIPD------NREQTVMTRLLVASNQIGCLLGKGGSIIAE 426
+A + Q RI + + E + T + V S G ++GKGG + E
Sbjct: 474 --------EAQFKAQGRIYGKLKEENFFGPKEEVKLETHIKVPSYAAGRVIGKGGKTVNE 525
Query: 427 MRKLSGAYIRILGKDQIPKCASENEEVVL-INGEFEAVQEALFQI 470
++ L+ A + ++ +DQ P EN+EVV+ I G F A Q A +I
Sbjct: 526 LQNLTSAEV-VVPRDQTP---DENDEVVVKITGHFYASQLAQRKI 566
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 79/179 (44%), Gaps = 11/179 (6%)
Query: 305 GVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQET--GCDIKVMEAVSGTEDR 362
G RPKP E+ R+L + VG +IGK GA IR++ ++T DI E E
Sbjct: 195 GAAARPKPQTEV-PLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKP 253
Query: 363 LIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGS 422
+ + S P + SA ++ + + A+ E + ++L +N +G L+GK G
Sbjct: 254 ITIHSTP----EGCSAACKIIMEIMQKEAQDTKFTEE--IPLKILAHNNFVGRLIGKEGR 307
Query: 423 IIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRD 481
+ ++ + + I I + E + + G E +A +I ++R + D
Sbjct: 308 NLKKIEQDTDTKITISPLQDL--TLYNPERTITVKGSIEPCAKAEEEIMKKIRESYEND 364
Score = 37.7 bits (86), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 587 PHRRVPV--VVPRSLVPIIQGEDGACLKQIRQISDAKITI-TDPKPGATETVIIISGTPE 643
P VP+ +VP V I G++GA ++ I + + +KI I GA E I I TPE
Sbjct: 202 PQTEVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHSTPE 261
Query: 644 QTHAAQSLIQAFVMSETETT 663
AA +I + E + T
Sbjct: 262 GCSAACKIIMEIMQKEAQDT 281
>sp|Q80WA4|NOVA1_RAT RNA-binding protein Nova-1 (Fragment) OS=Rattus norvegicus GN=Nova1
PE=2 SV=1
Length = 474
Score = 56.2 bits (134), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 89/177 (50%), Gaps = 28/177 (15%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA---VSGTEDRLIVISGPAHPDDR 375
++L G +IGKGG I L++ETG IK+ ++ GT +R+ +I G +
Sbjct: 51 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIEALNA 110
Query: 376 ISA---------PQD-------AVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGK 419
+ PQ+ ++L+ QT + PD +Q +++V ++ G ++GK
Sbjct: 111 VHGFIAEKIREMPQNVAKTEPVSILQPQTTVN---PDRIKQ---VKIIVPNSTAGLIIGK 164
Query: 420 GGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRH 476
GG+ + + + SGA++++ Q P + E VV ++GE E ++A+ I +++
Sbjct: 165 GGATVKAIMEQSGAWVQL---SQKPDGINLQERVVTVSGEPEQNRKAVELIIQKIQE 218
Score = 41.2 bits (95), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 591 VPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPK---PGATETVIIISGTPEQTHA 647
V + VP +LV I G+ G L + ++++ A+I I+ PG + I+GTP T A
Sbjct: 399 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQA 458
Query: 648 AQSLIQAFVMSE 659
AQ LI + E
Sbjct: 459 AQYLITQRITYE 470
Score = 40.8 bits (94), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 403 MTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQ-IPKCASENEEVVLINGEFE 461
+ + V N +G +LGKGG + E ++L+GA I+I K + +P + N +V I G
Sbjct: 398 VVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVP--GTRNRKVT-ITGTPA 454
Query: 462 AVQEALFQITTRLRHH 477
A Q A + IT R+ +
Sbjct: 455 ATQAAQYLITQRITYE 470
Score = 38.5 bits (88), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 589 RRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGAT--ETVIIISGTPEQTH 646
++V ++VP S +I G+ GA +K I + S A + ++ G E V+ +SG PEQ
Sbjct: 147 KQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNR 206
Query: 647 AAQSLI 652
A LI
Sbjct: 207 KAVELI 212
Score = 37.7 bits (86), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 92/219 (42%), Gaps = 59/219 (26%)
Query: 44 GGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEET---VSGSDERLVVIEASDN 100
G +VL P +IGK G+ + Q+ ++TG TI++ ++ G+ ER+ +I+
Sbjct: 47 GQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQG--- 103
Query: 101 KKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQKAL 160
T E L A + G +EK Q
Sbjct: 104 ---TIEALNA---------------------------------VHGFIAEKIREMPQN-- 125
Query: 161 LLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIK---------- 210
+ E + ++P+T V + + K K ++V ++ G ++GKGG +K
Sbjct: 126 VAKTEPVSILQPQTTV-NPDRIKQVK----IIVPNSTAGLIIGKGGATVKAIMEQSGAWV 180
Query: 211 QIDKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDN 249
Q+ + P + VV ++GE + RKA++LI ++ ++
Sbjct: 181 QLSQKPDGINLQERVVTVSGEPEQNRKAVELIIQKIQED 219
Score = 37.4 bits (85), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 100/228 (43%), Gaps = 41/228 (17%)
Query: 165 ERMVEVEPETEVADQENT-KSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKLPTCALASD 223
+R +E PE + NT + ++ L++L+ S G ++GKGG I Q+ K
Sbjct: 26 KRPLEAPPEAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKE-------- 77
Query: 224 EVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATG 283
TG + K+ D P E + L ++ + A
Sbjct: 78 -----TGATIKLSKSK--------DFYPGTTERVC---------LIQGTIEALNAV---- 111
Query: 284 HRDVADIHLPMPPSIPKFHESGVLD-RPKPSPE-ILTFRLLCHDERVGGVIGKGGAIIRS 341
H +A+ MP ++ K +L + +P+ I +++ + G +IGKGGA +++
Sbjct: 112 HGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAGLIIGKGGATVKA 171
Query: 342 LKQETGCDIKVMEAVSGT--EDRLIVISGPAHPDDRISAPQDAVLRVQ 387
+ +++G +++ + G ++R++ +SG P+ A + + ++Q
Sbjct: 172 IMEQSGAWVQLSQKPDGINLQERVVTVSG--EPEQNRKAVELIIQKIQ 217
>sp|Q9PW80|IF2B3_DANRE Insulin-like growth factor 2 mRNA-binding protein 3 OS=Danio rerio
GN=igf2bp3 PE=1 SV=1
Length = 582
Score = 53.5 bits (127), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 134/303 (44%), Gaps = 45/303 (14%)
Query: 189 LRLLVLSTQVGCLLGKGGCVIKQIDK----------LPTCALASDE-VVQITGEVDTVRK 237
L++L + VG L+GK G +K+I++ L L + E + + G +D K
Sbjct: 278 LKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQDLTLYNPERTITVKGTLDACAK 337
Query: 238 ALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGA--PYATGHRDVADIHLPMP 295
A + I ++ ++ D ++ S+ +P ++++ G A+G + + P P
Sbjct: 338 AEEEIMKKVRESYENDVAAMHLQ----SNLIPGLNLNALGLFPGAASGGISPSVVSGPPP 393
Query: 296 PSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA 355
+ + G E T L VG +IGK G I+ L + G IK+ A
Sbjct: 394 GAQAGYQSFGA------QMESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPA 447
Query: 356 VS-GTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPD------NREQTVMTRLLV 408
+ R+++ISGP +A + Q RI + + E + + V
Sbjct: 448 DGIDAKQRMVIISGPP----------EAQFKAQGRIFGKLKEENFFGPKEEVKLEAHIKV 497
Query: 409 ASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVL-INGEFEAVQEAL 467
S G ++GKGG + E++ L+ A + ++ +DQ P EN++VV+ I G F A Q A
Sbjct: 498 PSFAAGRVIGKGGKTVNELQNLTSAEV-VVPRDQTP---DENDQVVVKITGHFYASQLAQ 553
Query: 468 FQI 470
+I
Sbjct: 554 RKI 556
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 95/428 (22%), Positives = 160/428 (37%), Gaps = 86/428 (20%)
Query: 230 GEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVAD 289
G D R+A+ ++ L++N IP D + ++ AP G R
Sbjct: 127 GAKDQAREAMDKLNGFLMENYALKVSYIP-----------DETAAAD-APAVGGRRGFN- 173
Query: 290 IHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQET--G 347
P P+ + RPK ++ RLL + VG +IGK GA IR++ ++T
Sbjct: 174 -----PRGPPRQGSPSLGARPKLQSDV-PLRLLVPTQFVGAIIGKEGATIRNITKQTHSK 227
Query: 348 CDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLL 407
DI E E + V S P + S+ ++ + + AI + + ++L
Sbjct: 228 IDIHRKENAGAAEKPITVHSTP----EGCSSACRNIMEIMQK--EAIDTKITEEIPLKIL 281
Query: 408 VASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEAL 467
+N +G L+GK G + ++ + + I I + E + + G +A +A
Sbjct: 282 AHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQDL--TLYNPERTITVKGTLDACAKAE 339
Query: 468 FQITTRLRHHFFRDAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSNFGPSFHKFD 527
+I ++R + D ++ + SN P + +
Sbjct: 340 EEIMKKVRESYEND----------------------------VAAMHLQSNLIPGLN-LN 370
Query: 528 AVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQ-GLMEVGGPMGFPDFVGP 586
A+G P S G+ P + P G Q G G M
Sbjct: 371 ALGLFPGAAS----------------GGISPSVVSGPPPGAQAGYQSFGAQM-------- 406
Query: 587 PHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPG--ATETVIIISGTPEQ 644
V + +P V I G+ G +KQ+ + + A I I P G A + ++IISG PE
Sbjct: 407 ESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIA-PADGIDAKQRMVIISGPPEA 465
Query: 645 THAAQSLI 652
AQ I
Sbjct: 466 QFKAQGRI 473
Score = 32.7 bits (73), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
Query: 406 LLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQE 465
L + + +G ++GK G I ++ + +GA I+I D I + +V+I+G EA +
Sbjct: 413 LFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPADGI----DAKQRMVIISGPPEAQFK 468
Query: 466 ALFQITTRLRHHFF 479
A +I +L+ F
Sbjct: 469 AQGRIFGKLKEENF 482
>sp|Q9JKN6|NOVA1_MOUSE RNA-binding protein Nova-1 OS=Mus musculus GN=Nova1 PE=1 SV=2
Length = 507
Score = 52.8 bits (125), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 93/195 (47%), Gaps = 40/195 (20%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA---VSGTEDRLIVISGPAHPDDR 375
++L G +IGKGG I L++ETG IK+ ++ GT +R+ +I G +
Sbjct: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIEALNA 111
Query: 376 ISA---------PQD-------AVLRVQT-----RIARAIPDNREQTV------MT---- 404
+ PQ+ ++L+ QT RI + +P + T MT
Sbjct: 112 VHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTSRA 171
Query: 405 ---RLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFE 461
+++V ++ G ++GKGG+ + + + SGA++++ Q P + E VV ++GE E
Sbjct: 172 NQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQL---SQKPDGINLQERVVTVSGEPE 228
Query: 462 AVQEALFQITTRLRH 476
++A+ I +++
Sbjct: 229 QNRKAVELIIQKIQE 243
Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 103/237 (43%), Gaps = 35/237 (14%)
Query: 165 ERMVEVEPETEVADQENT-KSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKLPTCAL--- 220
+R +E PE + NT + ++ L++L+ S G ++GKGG I Q+ K +
Sbjct: 27 KRPLEAPPEAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLS 86
Query: 221 --------ASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHS 272
++ V I G ++ + I+ ++ + +P N + P+
Sbjct: 87 KSKDFYPGTTERVCLIQGTIEALNAVHGFIAEKIRE--------MPQN-VAKTEPV---- 133
Query: 273 VSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVI 332
S P T + D LP P+ K S P + +++ + G +I
Sbjct: 134 --SILQPQTTVNPDRIKQTLPSSPTTTKSSPS----DPMTTSRANQVKIIVPNSTAGLII 187
Query: 333 GKGGAIIRSLKQETGCDIKVMEAVSGT--EDRLIVISGPAHPDDRISAPQDAVLRVQ 387
GKGGA ++++ +++G +++ + G ++R++ +SG P+ A + + ++Q
Sbjct: 188 GKGGATVKAIMEQSGAWVQLSQKPDGINLQERVVTVSG--EPEQNRKAVELIIQKIQ 242
Score = 41.6 bits (96), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 403 MTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQ-IPKCASENEEVVLINGEFE 461
+ + V N +G +LGKGG + E ++L+GA I+I K + +P + N +V I G
Sbjct: 423 VVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVP--GTRNRKVT-ITGTPA 479
Query: 462 AVQEALFQITTRLRHH 477
A Q A + IT R+ +
Sbjct: 480 ATQAAQYLITQRITYE 495
Score = 41.2 bits (95), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 107/260 (41%), Gaps = 56/260 (21%)
Query: 44 GGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEET---VSGSDERLVVIEASDN 100
G +VL P +IGK G+ + Q+ ++TG TI++ ++ G+ ER+ +I+ +
Sbjct: 48 GQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIE 107
Query: 101 KKETSENL--EASIERSENNGREE-ASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQ 157
E E +N + E S+ D + + L S T+K
Sbjct: 108 ALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQT------LPSSPTTTKSS 161
Query: 158 KALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIK------- 210
+ + R +V +++V ++ G ++GKGG +K
Sbjct: 162 PSDPMTTSRANQV-------------------KIIVPNSTAGLIIGKGGATVKAIMEQSG 202
Query: 211 ---QIDKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIP---GNPTGP 264
Q+ + P + VV ++GE + RKA++LI ++ ++ P+ + N TGP
Sbjct: 203 AWVQLSQKPDGINLQERVVTVSGEPEQNRKAVELIIQKIQED-PQSGSCLNISYANVTGP 261
Query: 265 ---SHPLPDHSVSSQGAPYA 281
S+P G+PYA
Sbjct: 262 VANSNPT--------GSPYA 273
Score = 41.2 bits (95), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 591 VPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPK---PGATETVIIISGTPEQTHA 647
V + VP +LV I G+ G L + ++++ A+I I+ PG + I+GTP T A
Sbjct: 424 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQA 483
Query: 648 AQSLIQAFVMSE 659
AQ LI + E
Sbjct: 484 AQYLITQRITYE 495
Score = 37.4 bits (85), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 589 RRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGAT--ETVIIISGTPEQTH 646
+V ++VP S +I G+ GA +K I + S A + ++ G E V+ +SG PEQ
Sbjct: 172 NQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNR 231
Query: 647 AAQSLI 652
A LI
Sbjct: 232 KAVELI 237
>sp|Q5ZLP8|IF2B3_CHICK Insulin-like growth factor 2 mRNA-binding protein 3 OS=Gallus
gallus GN=IGF2BP3 PE=2 SV=1
Length = 584
Score = 52.8 bits (125), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 78/165 (47%), Gaps = 22/165 (13%)
Query: 314 PEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHP 372
PE T L VG +IGK G I+ L + G IK+ A + R+++I+GP
Sbjct: 407 PESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMVIITGPP-- 464
Query: 373 DDRISAPQDAVLRVQTRIARAIPD------NREQTVMTRLLVASNQIGCLLGKGGSIIAE 426
+A + Q RI + + E + + V S G ++GKGG + E
Sbjct: 465 --------EAQFKAQGRIYGKLKEENFFGPKEEVKLEAHIKVPSYAAGRVIGKGGKTVNE 516
Query: 427 MRKLSGAYIRILGKDQIPKCASENEEVVL-INGEFEAVQEALFQI 470
++ L+ A + ++ +DQ P EN++VV+ I G F A Q A +I
Sbjct: 517 LQNLTSAEV-VVPRDQTP---DENDQVVVKITGHFYACQLAQRKI 557
Score = 37.7 bits (86), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 76/175 (43%), Gaps = 11/175 (6%)
Query: 309 RPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQET--GCDIKVMEAVSGTEDRLIVI 366
R KP ++ R+L + VG +IGK GA IR++ ++T DI E E + +
Sbjct: 190 RQKPQSDV-PLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIH 248
Query: 367 SGPAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAE 426
S P + S ++ + + A+ E + ++L +N +G L+GK G + +
Sbjct: 249 STP----EGCSTACKIIMEIMQKEAQDTKFTEE--IPLKILAHNNFVGRLIGKEGRNLKK 302
Query: 427 MRKLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRD 481
+ + + I I + E + + G E +A +I ++R + D
Sbjct: 303 IEQDTDTKITISPLQDL--TLYNPERTITVKGSIETCAKAEEEIMKKIRESYEND 355
Score = 35.4 bits (80), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Query: 587 PHRRVPV--VVPRSLVPIIQGEDGACLKQIRQISDAKITI-TDPKPGATETVIIISGTPE 643
P VP+ +VP V I G++GA ++ I + + +KI I GA E I I TPE
Sbjct: 193 PQSDVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHSTPE 252
Query: 644 QTHAAQSLIQAFVMSETETT 663
A +I + E + T
Sbjct: 253 GCSTACKIIMEIMQKEAQDT 272
>sp|O88477|IF2B1_MOUSE Insulin-like growth factor 2 mRNA-binding protein 1 OS=Mus musculus
GN=Igf2bp1 PE=1 SV=1
Length = 577
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 95/452 (21%), Positives = 183/452 (40%), Gaps = 105/452 (23%)
Query: 38 PSKSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEA 97
P+K P I R+L P + +IGK+G + I++ T I
Sbjct: 188 PAKQQPVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKI------------------ 229
Query: 98 SDNKKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQ 157
+ R EN G E +++ S +G +S
Sbjct: 230 -------------DVHRKENAGAAEKAISVHSTP-------------EGCSS-------- 255
Query: 158 KALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQID---- 213
A ++ E M + +T+ AD+ L++L + VG L+GK G +K+++
Sbjct: 256 -ACKMILEIMHKEAKDTKTADE-------VPLKILAHNNFVGRLIGKEGRNLKKVEQDTE 307
Query: 214 -KLPTCALAS------DEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSH 266
K+ +L + + + G ++ +A + I ++ + D ++ + SH
Sbjct: 308 TKITISSLQDLTLYNPERTITVKGAIENCCRAEQEIMKKVREAYENDVAAM----SLQSH 363
Query: 267 PLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDE 326
+P ++++ G + V + + P S + +PE ++ +
Sbjct: 364 LIPGLNLAAVGL-FPASSSAVPPPPSSVTGAAPY---SSFMQ----APEQEMVQVFIPAQ 415
Query: 327 RVGGVIGKGGAIIRSLKQETGCDIKVME-AVSGTEDRLIVISGPAHPDDRISAPQDAVLR 385
VG +IGK G I+ L + IK+ ++ R++VI+GP +A +
Sbjct: 416 AVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVVITGPP----------EAQFK 465
Query: 386 VQTRIARAIPD------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILG 439
Q RI + + E + T + V ++ G ++GKGG + E++ L+ A + ++
Sbjct: 466 AQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEV-VVP 524
Query: 440 KDQIPKCASENEEVVL-INGEFEAVQEALFQI 470
+DQ P EN++V++ I G F A Q A +I
Sbjct: 525 RDQTP---DENDQVIVKIIGHFYASQMAQRKI 553
Score = 39.3 bits (90), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 74/173 (42%), Gaps = 10/173 (5%)
Query: 311 KPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV--MEAVSGTEDRLIVISG 368
K P + RLL + VG +IGK GA IR++ ++T I V E E + V S
Sbjct: 190 KQQPVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHST 249
Query: 369 PAHPDDRISAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMR 428
P + S+ +L + + A+ E V ++L +N +G L+GK G + ++
Sbjct: 250 P----EGCSSACKMILEIMHKEAKDTKTADE--VPLKILAHNNFVGRLIGKEGRNLKKVE 303
Query: 429 KLSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRD 481
+ + I I + E + + G E A +I ++R + D
Sbjct: 304 QDTETKITISSLQDL--TLYNPERTITVKGAIENCCRAEQEIMKKVREAYEND 354
Score = 37.0 bits (84), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 579 GFPDFVGPPHRRVPVVVP-RSLVPI-----IQGEDGACLKQIRQISDAKITI-TDPKPGA 631
G P G P ++ PV +P R LVP I G++GA ++ I + + +KI + GA
Sbjct: 180 GSPVAAGAPAKQQPVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGA 239
Query: 632 TETVIIISGTPEQTHAAQSLIQAFVMSETETT 663
E I + TPE +A +I + E + T
Sbjct: 240 AEKAISVHSTPEGCSSACKMILEIMHKEAKDT 271
>sp|Q96I24|FUBP3_HUMAN Far upstream element-binding protein 3 OS=Homo sapiens GN=FUBP3
PE=1 SV=2
Length = 572
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 78/359 (21%), Positives = 145/359 (40%), Gaps = 36/359 (10%)
Query: 316 ILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDR 375
++T D+ VG +IG+GG I ++ E+GC I++ SG +R V++G +
Sbjct: 77 VITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTP---ES 133
Query: 376 ISAPQDAVLRVQTRIARAIP----DNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLS 431
I + + ++ R R P D + + +L+ ++++G ++G+GG I ++++ +
Sbjct: 134 IEQAKRLLGQIVDR-CRNGPGFHNDIDSNSTIQEILIPASKVGLVIGRGGETIKQLQERT 192
Query: 432 GAYIRILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRDAFPSINRPLN 491
G + ++ +P A + + + + +E + +I FR N +
Sbjct: 193 GVKMVMIQDGPLPTGADKPLRITGDAFKVQQAREMVLEIIREKDQADFRGVRGDFNSRMG 252
Query: 492 PTFLDQVSPFPSF-----IGR------RELSPPGMYSNFGP----SFHKFDAVGGPPPPG 536
++ VS P F IGR + + G+ F P S + V GPP
Sbjct: 253 GGSIE-VS-VPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERAAQVMGPPDRC 310
Query: 537 SFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGGPMGFPDFVGPPHRRVPVVVP 596
H + R G +G VG P G + + VP
Sbjct: 311 QHAAHIISELILTAQERDGFGGLAAARGRGRGRGDWSVGAPGGV--------QEITYTVP 362
Query: 597 RSLVPIIQGEDGACLKQIRQISDAKITIT-DPKPGATETV--IIISGTPEQTHAAQSLI 652
++ G+ G +K I Q S A + + +P P + + I G P+Q A+ LI
Sbjct: 363 ADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNSDPNLRRFTIRGVPQQIEVARQLI 421
Score = 39.3 bits (90), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 73/348 (20%), Positives = 125/348 (35%), Gaps = 82/348 (23%)
Query: 48 FRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETSEN 107
F+V P + +IG+ GE +S+I ++G I++ SG ER V+ + E ++
Sbjct: 82 FKV--PDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPESIEQAKR 139
Query: 108 LEASIERSENNGREEASVADESDNKKEDSVNEGSV------------------------L 143
L I NG + D + +E + V +
Sbjct: 140 LLGQIVDRCRNGPGFHNDIDSNSTIQEILIPASKVGLVIGRGGETIKQLQERTGVKMVMI 199
Query: 144 MDG---------LNSEKETSKVQKALLLVFERMVEVEPE--TEVADQENTKSSKFVLRLL 192
DG L + KVQ+A +V E + E + V N++ + +
Sbjct: 200 QDGPLPTGADKPLRITGDAFKVQQAREMVLEIIREKDQADFRGVRGDFNSRMGGGSIEVS 259
Query: 193 VLSTQVGCLLGKGGCVIKQIDK--------LPTCALASDEVVQITGEVDTVRKALKLISH 244
V VG ++G+ G +IK+I P ++ + Q+ G D + A +IS
Sbjct: 260 VPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERAAQVMGPPDRCQHAAHIISE 319
Query: 245 QLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHES 304
+L RD G D SV + G V +I +P
Sbjct: 320 LILTAQERDGFGGLAAARGRGRGRGDWSVGAPGG--------VQEITYTVPA-------- 363
Query: 305 GVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV 352
++ G VIGKGG I+S+ Q++G +++
Sbjct: 364 ---------------------DKCGLVIGKGGENIKSINQQSGAHVEL 390
Score = 33.5 bits (75), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 57/288 (19%), Positives = 109/288 (37%), Gaps = 91/288 (31%)
Query: 184 SSKFVLRLLVLSTQVGCLLGKGGCVIKQIDK-------------LPTCALASDEVVQITG 230
S+ + +L+ +++VG ++G+GG IKQ+ + LPT A D+ ++ITG
Sbjct: 160 SNSTIQEILIPASKVGLVIGRGGETIKQLQERTGVKMVMIQDGPLPTGA---DKPLRITG 216
Query: 231 EVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADI 290
+ V++A +++ + + D + G D + G
Sbjct: 217 DAFKVQQAREMVLEIIREKDQADFRGVRG----------DFNSRMGGGSIEV-------- 258
Query: 291 HLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDI 350
S+P+F VG VIG+ G +I+ ++ + G I
Sbjct: 259 ------SVPRFA-------------------------VGIVIGRNGEMIKKIQNDAGVRI 287
Query: 351 KVMEAVSGTEDRLIVISGPAHPDDRISAPQ---DAVLRVQTR------------------ 389
+ + +R + GP PD A + +L Q R
Sbjct: 288 QFKPDDGISPERAAQVMGP--PDRCQHAAHIISELILTAQERDGFGGLAAARGRGRGRGD 345
Query: 390 IARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRI 437
+ P ++ T V +++ G ++GKGG I + + SGA++ +
Sbjct: 346 WSVGAPGGVQEITYT---VPADKCGLVIGKGGENIKSINQQSGAHVEL 390
Score = 33.1 bits (74), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 29/62 (46%)
Query: 595 VPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQA 654
VP +V I G G + +I+ S KI I G E +++GTPE A+ L+
Sbjct: 84 VPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPESIEQAKRLLGQ 143
Query: 655 FV 656
V
Sbjct: 144 IV 145
>sp|P51513|NOVA1_HUMAN RNA-binding protein Nova-1 OS=Homo sapiens GN=NOVA1 PE=1 SV=1
Length = 510
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 92/198 (46%), Gaps = 43/198 (21%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS------GTEDRLIVISGPAHP 372
++L G +IGKGG I L++ETG IK+ + GT +R+ +I G
Sbjct: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKLSKSKDFYPGTTERVCLIQGTVEA 111
Query: 373 DDRISA---------PQD-------AVLRVQT-----RIARAIPDNREQTV------MT- 404
+ + PQ+ ++L+ QT RI + +P + T MT
Sbjct: 112 LNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTT 171
Query: 405 ------RLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLING 458
+++V ++ G ++GKGG+ + + + SGA++++ Q P + E VV ++G
Sbjct: 172 SRANQVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL---SQKPDGINLQERVVTVSG 228
Query: 459 EFEAVQEALFQITTRLRH 476
E E ++A+ I +++
Sbjct: 229 EPEQNRKAVELIIQKIQE 246
Score = 42.7 bits (99), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 103/240 (42%), Gaps = 38/240 (15%)
Query: 165 ERMVEVEPETEVADQENT-KSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDKLPTCAL--- 220
+R +E PE + NT + ++ L++L+ S G ++GKGG I Q+ K +
Sbjct: 27 KRPLEAPPEAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLS 86
Query: 221 -----------ASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSHPLP 269
++ V I G V+ + I+ ++ + +P N + P+
Sbjct: 87 KLSKSKDFYPGTTERVCLIQGTVEALNAVHGFIAEKIRE--------MPQN-VAKTEPV- 136
Query: 270 DHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVG 329
S P T + D LP P+ K S P + +++ + G
Sbjct: 137 -----SILQPQTTVNPDRIKQTLPSSPTTTKSSPS----DPMTTSRANQVKIIVPNSTAG 187
Query: 330 GVIGKGGAIIRSLKQETGCDIKVMEAVSGT--EDRLIVISGPAHPDDRISAPQDAVLRVQ 387
+IGKGGA ++++ +++G +++ + G ++R++ +SG P+ A + + ++Q
Sbjct: 188 LIIGKGGATVKAVMEQSGAWVQLSQKPDGINLQERVVTVSG--EPEQNRKAVELIIQKIQ 245
Score = 41.6 bits (96), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 403 MTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQ-IPKCASENEEVVLINGEFE 461
+ + V N +G +LGKGG + E ++L+GA I+I K + +P + N +V I G
Sbjct: 426 VVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVP--GTRNRKVT-ITGTPA 482
Query: 462 AVQEALFQITTRLRHH 477
A Q A + IT R+ +
Sbjct: 483 ATQAAQYLITQRITYE 498
Score = 41.2 bits (95), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 591 VPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPK---PGATETVIIISGTPEQTHA 647
V + VP +LV I G+ G L + ++++ A+I I+ PG + I+GTP T A
Sbjct: 427 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQA 486
Query: 648 AQSLIQAFVMSE 659
AQ LI + E
Sbjct: 487 AQYLITQRITYE 498
Score = 39.3 bits (90), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 106/263 (40%), Gaps = 59/263 (22%)
Query: 44 GGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVS------GSDERLVVIEA 97
G +VL P +IGK G+ + Q+ ++TG TI++ + G+ ER+ +I+
Sbjct: 48 GQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKLSKSKDFYPGTTERVCLIQG 107
Query: 98 SDNKKETSENL--EASIERSENNGREE-ASVADESDNKKEDSVNEGSVLMDGLNSEKETS 154
+ E E +N + E S+ D + + L S T+
Sbjct: 108 TVEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQT------LPSSPTTT 161
Query: 155 KVQKALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIK---- 210
K + + R +V +++V ++ G ++GKGG +K
Sbjct: 162 KSSPSDPMTTSRANQV-------------------KIIVPNSTAGLIIGKGGATVKAVME 202
Query: 211 ------QIDKLPTCALASDEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIP---GNP 261
Q+ + P + VV ++GE + RKA++LI ++ ++ P+ + N
Sbjct: 203 QSGAWVQLSQKPDGINLQERVVTVSGEPEQNRKAVELIIQKIQED-PQSGSCLNISYANV 261
Query: 262 TGP---SHPLPDHSVSSQGAPYA 281
TGP S+P G+PYA
Sbjct: 262 TGPVANSNPT--------GSPYA 276
Score = 36.6 bits (83), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 589 RRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGAT--ETVIIISGTPEQTH 646
+V ++VP S +I G+ GA +K + + S A + ++ G E V+ +SG PEQ
Sbjct: 175 NQVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNR 234
Query: 647 AAQSLI 652
A LI
Sbjct: 235 KAVELI 240
>sp|Q08CK7|IF2B1_DANRE Insulin-like growth factor 2 mRNA-binding protein 1 OS=Danio rerio
GN=igf2bp1 PE=1 SV=1
Length = 598
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 94/454 (20%), Positives = 177/454 (38%), Gaps = 110/454 (24%)
Query: 38 PSKSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEA 97
PSK I R+L P + +IGK+G + I++ T I
Sbjct: 191 PSKHQHADIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKI------------------ 232
Query: 98 SDNKKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQ 157
+ R EN G E ++ S EG
Sbjct: 233 -------------DVHRKENAGAAEKPISIHS-------TPEG---------------CS 257
Query: 158 KALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQIDK--- 214
A ++ E M + +T+ AD+ L++L + VG L+GK G +K++++
Sbjct: 258 AACRMILEIMNQEAKDTKTADE-------VPLKVLAHNNFVGRLIGKEGRNLKKVEQDTD 310
Query: 215 -------LPTCALASDE-VVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSH 266
L L + E + + G ++ A L +++ +++ +H
Sbjct: 311 TKITISPLQDLTLYNPERTITVKGSIE----ACCLAEQEIMKKVREAYDNDIAAMNQQTH 366
Query: 267 PLPDHSVSSQGAPYATGHRDVADI--HLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCH 324
+P ++ + G + + +P PP P + E T +
Sbjct: 367 LIPGLNLGAIGLFPPSSAMPPPALGNSVPGPPY-----------GPMGASEQETVHVYIP 415
Query: 325 DERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS-GTEDRLIVISGPAHPDDRISAPQDAV 383
+ VG +IGK G I+ L + G IK+ A + ++ R+++++GP +A
Sbjct: 416 AQAVGALIGKKGQHIKQLSRFAGASIKIAPAEAPDSKMRMVIVTGPP----------EAQ 465
Query: 384 LRVQTRIARAIPD------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRI 437
+ Q RI + + E + T + VA+ G ++GKGG + E++ L+ A + +
Sbjct: 466 FKAQGRIYGKLKEENFFGPKEEVKLETHIKVAAAAAGRVIGKGGKTVNELQNLTAAEV-V 524
Query: 438 LGKDQIPKCASENEEVVL-INGEFEAVQEALFQI 470
+ ++Q P E+++V++ I G F A Q A +I
Sbjct: 525 VPREQTP---DEHDQVIVKIIGHFYASQLAQRKI 555
Score = 40.8 bits (94), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 98/445 (22%), Positives = 161/445 (36%), Gaps = 94/445 (21%)
Query: 225 VVQIT-GEVDTVRKALKLISHQLLDNSPRDHESIPG-NPTGPSHPLPDHSVSSQGAPYAT 282
VV +T G + R+A++ ++ DN+ IP N S PD+ P T
Sbjct: 121 VVNVTYGTREQARQAIQKLNGYQFDNNALRVSYIPDENSEVDSQRGPDNGRRPGYGPRGT 180
Query: 283 GHRDVADIHLPMPPS--IPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIR 340
+ M P IP H+ D P RLL + VG +IGK GA IR
Sbjct: 181 SRQ--------MSPGSGIPSKHQHA--DIP--------LRLLVPTQYVGAIIGKEGATIR 222
Query: 341 SLKQETGCDIKV--MEAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPDNR 398
++ ++T I V E E + + S P + SA +L + + A+
Sbjct: 223 NITKQTQSKIDVHRKENAGAAEKPISIHSTP----EGCSAACRMILEIMNQEAKDTKTAD 278
Query: 399 EQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLING 458
E V ++L +N +G L+GK G + ++ + + I I + E + + G
Sbjct: 279 E--VPLKVLAHNNFVGRLIGKEGRNLKKVEQDTDTKITISPLQDL--TLYNPERTITVKG 334
Query: 459 EFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSPFPSFIGRRELSPPGMYSN 518
EA A +I ++R + D ++N+ Q P L G++
Sbjct: 335 SIEACCLAEQEIMKKVREAYDND-IAAMNQ--------QTHLIPGL----NLGAIGLFPP 381
Query: 519 FGPSFHKF--DAVGGPPPPGSFHPHDDHSAFMHHIHRPGMPPHMPDMKPWGPQGLMEVGG 576
++V GPP +GP G E
Sbjct: 382 SSAMPPPALGNSVPGPP--------------------------------YGPMGASE--- 406
Query: 577 PMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPK-PGATETV 635
V V +P V + G+ G +KQ+ + + A I I + P + +
Sbjct: 407 -----------QETVHVYIPAQAVGALIGKKGQHIKQLSRFAGASIKIAPAEAPDSKMRM 455
Query: 636 IIISGTPEQTHAAQSLIQAFVMSET 660
+I++G PE AQ I + E
Sbjct: 456 VIVTGPPEAQFKAQGRIYGKLKEEN 480
Score = 33.9 bits (76), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 6/102 (5%)
Query: 566 WGPQGLMEVGGP-MGFPDFVGPPHRRVPV--VVPRSLVPIIQGEDGACLKQIRQISDAKI 622
+GP+G P G P H +P+ +VP V I G++GA ++ I + + +KI
Sbjct: 175 YGPRGTSRQMSPGSGIPS--KHQHADIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKI 232
Query: 623 TI-TDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSETETT 663
+ GA E I I TPE AA +I + E + T
Sbjct: 233 DVHRKENAGAAEKPISIHSTPEGCSAACRMILEIMNQEAKDT 274
>sp|P61980|HNRPK_RAT Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus
GN=Hnrnpk PE=1 SV=1
Length = 463
Score = 50.1 bits (118), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 574 VGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATE 633
GG + D +G P V +P+ L I G+ G +KQIR S A I I +P G+ +
Sbjct: 374 AGGRGSYGD-LGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSED 432
Query: 634 TVIIISGTPEQTHAAQSLIQAFV 656
+I I+GT +Q AQ L+Q V
Sbjct: 433 RIITITGTQDQIQNAQYLLQNSV 455
Score = 46.6 bits (109), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 35/53 (66%)
Query: 316 ILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
I+T ++ + G +IGKGG I+ ++ E+G IK+ E + G+EDR+I I+G
Sbjct: 387 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITG 439
Score = 42.0 bits (97), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 105/272 (38%), Gaps = 41/272 (15%)
Query: 301 FHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTE 360
E R + + E++ R+L + G VIGKGG I++L+ + + V ++ SG E
Sbjct: 27 MEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDS-SGPE 85
Query: 361 DRLIVISGPAH-----------------------PDDRISAPQDAVLRVQTRIARAIPDN 397
R++ IS ++ DAV + + + +
Sbjct: 86 -RILSISADIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFD 144
Query: 398 REQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLIN 457
E RLL+ + G ++G G+ I E+R+ + I++ + C + VVLI
Sbjct: 145 CE----LRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQE----CCPHSTDRVVLIG 196
Query: 458 GEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSPFPSF---IGRRELSPPG 514
G+ + V E + I + + +P +P F D+ + F R P G
Sbjct: 197 GKPDRVVECIKIILDLISESPIKGR----AQPYDPNFYDETYDYGGFTMMFDDRRGRPVG 252
Query: 515 MYSNFGPSFHKF-DAVGGPPPPGSFHPHDDHS 545
F + GG P P S +DD S
Sbjct: 253 FPMRGRGGFDRMPPGRGGRPMPPSRRDYDDMS 284
Score = 40.4 bits (93), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 38/63 (60%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
I +V P +IGK G+ + QI ++G +I+++E + GS++R++ I + ++ + +
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNA 447
Query: 106 ENL 108
+ L
Sbjct: 448 QYL 450
Score = 34.3 bits (77), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 44/81 (54%), Gaps = 8/81 (9%)
Query: 402 VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFE 461
+ T++ + + G ++GKGG I ++R SGA I+I D+ P SE+ ++ I G +
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DE-PLEGSED-RIITITGTQD 442
Query: 462 AVQEALFQITTRLRHH---FF 479
+Q A + + ++ + FF
Sbjct: 443 QIQNAQYLLQNSVKQYSGKFF 463
Score = 32.7 bits (73), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 12/99 (12%)
Query: 175 EVADQENTKSSKF--VLRLLVLSTQVGCLLGKGGCVIKQIDK---------LPTCALASD 223
E + ++ K S F LRLL+ + G ++G G IK++ + C ++D
Sbjct: 131 ECLNYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTD 190
Query: 224 EVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPT 262
VV I G+ D V + +K+I L+ SP + P +P
Sbjct: 191 RVVLIGGKPDRVVECIKII-LDLISESPIKGRAQPYDPN 228
>sp|P61979|HNRPK_MOUSE Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus GN=Hnrnpk
PE=1 SV=1
Length = 463
Score = 50.1 bits (118), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 574 VGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATE 633
GG + D +G P V +P+ L I G+ G +KQIR S A I I +P G+ +
Sbjct: 374 AGGRGSYGD-LGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSED 432
Query: 634 TVIIISGTPEQTHAAQSLIQAFV 656
+I I+GT +Q AQ L+Q V
Sbjct: 433 RIITITGTQDQIQNAQYLLQNSV 455
Score = 46.6 bits (109), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 35/53 (66%)
Query: 316 ILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
I+T ++ + G +IGKGG I+ ++ E+G IK+ E + G+EDR+I I+G
Sbjct: 387 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITG 439
Score = 42.0 bits (97), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 105/272 (38%), Gaps = 41/272 (15%)
Query: 301 FHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTE 360
E R + + E++ R+L + G VIGKGG I++L+ + + V ++ SG E
Sbjct: 27 MEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDS-SGPE 85
Query: 361 DRLIVISGPAH-----------------------PDDRISAPQDAVLRVQTRIARAIPDN 397
R++ IS ++ DAV + + + +
Sbjct: 86 -RILSISADIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFD 144
Query: 398 REQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLIN 457
E RLL+ + G ++G G+ I E+R+ + I++ + C + VVLI
Sbjct: 145 CE----LRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQE----CCPHSTDRVVLIG 196
Query: 458 GEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSPFPSF---IGRRELSPPG 514
G+ + V E + I + + +P +P F D+ + F R P G
Sbjct: 197 GKPDRVVECIKIILDLISESPIKGR----AQPYDPNFYDETYDYGGFTMMFDDRRGRPVG 252
Query: 515 MYSNFGPSFHKF-DAVGGPPPPGSFHPHDDHS 545
F + GG P P S +DD S
Sbjct: 253 FPMRGRGGFDRMPPGRGGRPMPPSRRDYDDMS 284
Score = 40.4 bits (93), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 38/63 (60%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
I +V P +IGK G+ + QI ++G +I+++E + GS++R++ I + ++ + +
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNA 447
Query: 106 ENL 108
+ L
Sbjct: 448 QYL 450
Score = 34.3 bits (77), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 44/81 (54%), Gaps = 8/81 (9%)
Query: 402 VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFE 461
+ T++ + + G ++GKGG I ++R SGA I+I D+ P SE+ ++ I G +
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DE-PLEGSED-RIITITGTQD 442
Query: 462 AVQEALFQITTRLRHH---FF 479
+Q A + + ++ + FF
Sbjct: 443 QIQNAQYLLQNSVKQYSGKFF 463
Score = 32.7 bits (73), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 12/99 (12%)
Query: 175 EVADQENTKSSKF--VLRLLVLSTQVGCLLGKGGCVIKQIDK---------LPTCALASD 223
E + ++ K S F LRLL+ + G ++G G IK++ + C ++D
Sbjct: 131 ECLNYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTD 190
Query: 224 EVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPT 262
VV I G+ D V + +K+I L+ SP + P +P
Sbjct: 191 RVVLIGGKPDRVVECIKII-LDLISESPIKGRAQPYDPN 228
>sp|P61978|HNRPK_HUMAN Heterogeneous nuclear ribonucleoprotein K OS=Homo sapiens GN=HNRNPK
PE=1 SV=1
Length = 463
Score = 50.1 bits (118), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 574 VGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATE 633
GG + D +G P V +P+ L I G+ G +KQIR S A I I +P G+ +
Sbjct: 374 AGGRGSYGD-LGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSED 432
Query: 634 TVIIISGTPEQTHAAQSLIQAFV 656
+I I+GT +Q AQ L+Q V
Sbjct: 433 RIITITGTQDQIQNAQYLLQNSV 455
Score = 46.6 bits (109), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 35/53 (66%)
Query: 316 ILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
I+T ++ + G +IGKGG I+ ++ E+G IK+ E + G+EDR+I I+G
Sbjct: 387 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITG 439
Score = 42.0 bits (97), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 105/272 (38%), Gaps = 41/272 (15%)
Query: 301 FHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTE 360
E R + + E++ R+L + G VIGKGG I++L+ + + V ++ SG E
Sbjct: 27 MEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDS-SGPE 85
Query: 361 DRLIVISGPAH-----------------------PDDRISAPQDAVLRVQTRIARAIPDN 397
R++ IS ++ DAV + + + +
Sbjct: 86 -RILSISADIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFD 144
Query: 398 REQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLIN 457
E RLL+ + G ++G G+ I E+R+ + I++ + C + VVLI
Sbjct: 145 CE----LRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQE----CCPHSTDRVVLIG 196
Query: 458 GEFEAVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSPFPSF---IGRRELSPPG 514
G+ + V E + I + + +P +P F D+ + F R P G
Sbjct: 197 GKPDRVVECIKIILDLISESPIKGR----AQPYDPNFYDETYDYGGFTMMFDDRRGRPVG 252
Query: 515 MYSNFGPSFHKF-DAVGGPPPPGSFHPHDDHS 545
F + GG P P S +DD S
Sbjct: 253 FPMRGRGGFDRMPPGRGGRPMPPSRRDYDDMS 284
Score = 40.4 bits (93), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 38/63 (60%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
I +V P +IGK G+ + QI ++G +I+++E + GS++R++ I + ++ + +
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNA 447
Query: 106 ENL 108
+ L
Sbjct: 448 QYL 450
Score = 34.3 bits (77), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 44/81 (54%), Gaps = 8/81 (9%)
Query: 402 VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFE 461
+ T++ + + G ++GKGG I ++R SGA I+I D+ P SE+ ++ I G +
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DE-PLEGSED-RIITITGTQD 442
Query: 462 AVQEALFQITTRLRHH---FF 479
+Q A + + ++ + FF
Sbjct: 443 QIQNAQYLLQNSVKQYSGKFF 463
Score = 32.7 bits (73), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 12/99 (12%)
Query: 175 EVADQENTKSSKF--VLRLLVLSTQVGCLLGKGGCVIKQIDK---------LPTCALASD 223
E + ++ K S F LRLL+ + G ++G G IK++ + C ++D
Sbjct: 131 ECLNYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTD 190
Query: 224 EVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPT 262
VV I G+ D V + +K+I L+ SP + P +P
Sbjct: 191 RVVLIGGKPDRVVECIKII-LDLISESPIKGRAQPYDPN 228
>sp|O19049|HNRPK_RABIT Heterogeneous nuclear ribonucleoprotein K OS=Oryctolagus cuniculus
GN=HNRNPK PE=2 SV=1
Length = 463
Score = 50.1 bits (118), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 574 VGGPMGFPDFVGPPHRRVPVVVPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATE 633
GG + D +G P V +P+ L I G+ G +KQIR S A I I +P G+ +
Sbjct: 374 AGGRGSYGD-LGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSED 432
Query: 634 TVIIISGTPEQTHAAQSLIQAFV 656
+I I+GT +Q AQ L+Q V
Sbjct: 433 RIITITGTQDQIQNAQYLLQNSV 455
Score = 46.6 bits (109), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 35/53 (66%)
Query: 316 ILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG 368
I+T ++ + G +IGKGG I+ ++ E+G IK+ E + G+EDR+I I+G
Sbjct: 387 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITG 439
Score = 42.0 bits (97), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 104/268 (38%), Gaps = 33/268 (12%)
Query: 301 FHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTE 360
E R + + E++ R+L + G VIGKGG I++L+ + + V ++ SG E
Sbjct: 27 MEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDS-SGPE 85
Query: 361 DRLIVISGPAHPDDRI---------------SAPQDAVLRVQTRIARAIP----DNREQT 401
R++ IS I S + L +++ + +
Sbjct: 86 -RILSISADIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHFKGSDFD 144
Query: 402 VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFE 461
RLL+ + G ++G G+ I E+R+ + I++ + C + VVLI G+ +
Sbjct: 145 CELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQE----CCPHSTDRVVLIGGKPD 200
Query: 462 AVQEALFQITTRLRHHFFRDAFPSINRPLNPTFLDQVSPFPSF---IGRRELSPPGMYSN 518
V E + I + + +P +P F D+ + F R P G
Sbjct: 201 RVVECIKIILDLISESPIKGR----AQPYDPNFYDETYDYGGFTMMFDDRRGRPVGFPMR 256
Query: 519 FGPSFHKF-DAVGGPPPPGSFHPHDDHS 545
F + GG P P S +DD S
Sbjct: 257 GRGGFDRMPPGRGGRPMPPSRRDYDDMS 284
Score = 40.4 bits (93), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 38/63 (60%)
Query: 46 IMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEASDNKKETS 105
I +V P +IGK G+ + QI ++G +I+++E + GS++R++ I + ++ + +
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNA 447
Query: 106 ENL 108
+ L
Sbjct: 448 QYL 450
Score = 34.3 bits (77), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 44/81 (54%), Gaps = 8/81 (9%)
Query: 402 VMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGEFE 461
+ T++ + + G ++GKGG I ++R SGA I+I D+ P SE+ ++ I G +
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DE-PLEGSED-RIITITGTQD 442
Query: 462 AVQEALFQITTRLRHH---FF 479
+Q A + + ++ + FF
Sbjct: 443 QIQNAQYLLQNSVKQYSGKFF 463
>sp|Q8CGX0|IF2B1_RAT Insulin-like growth factor 2 mRNA-binding protein 1 OS=Rattus
norvegicus GN=Igf2bp1 PE=1 SV=1
Length = 577
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 81/166 (48%), Gaps = 22/166 (13%)
Query: 313 SPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVME-AVSGTEDRLIVISGPAH 371
+PE ++ + VG +IGK G I+ L + IK+ ++ R++VI+GP
Sbjct: 402 APEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVVITGPP- 460
Query: 372 PDDRISAPQDAVLRVQTRIARAIPD------NREQTVMTRLLVASNQIGCLLGKGGSIIA 425
+A + Q RI + + E + T + V ++ G ++GKGG +
Sbjct: 461 ---------EAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKTVN 511
Query: 426 EMRKLSGAYIRILGKDQIPKCASENEEVVL-INGEFEAVQEALFQI 470
E++ L+ A + ++ +DQ P EN++V++ I G F A Q A +I
Sbjct: 512 ELQNLTAAEV-VVPRDQTP---DENDQVIVKIIGHFYASQMAQRKI 553
Score = 38.1 bits (87), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 71/165 (43%), Gaps = 10/165 (6%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV--MEAVSGTEDRLIVISGPAHPDDRI 376
RLL + VG +IGK GA IR++ ++T I V E E + V S P +
Sbjct: 198 LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTP----EGC 253
Query: 377 SAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIR 436
S+ +L + + A+ E V ++L +N +G L+GK G + ++ + + I
Sbjct: 254 SSACKMILEIMHKEAKDTKTADE--VPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKIT 311
Query: 437 ILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRD 481
I + E + + G E A +I ++R + D
Sbjct: 312 ISSLQDL--TLYNPERTITVKGAIENCCRAEQEIMKKVREAYEND 354
Score = 34.3 bits (77), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 7/92 (7%)
Query: 579 GFPDFVGPPHRRVPVVVP-RSLVPI-----IQGEDGACLKQIRQISDAKITI-TDPKPGA 631
G P G P ++ V +P R LVP I G++GA ++ I + + +KI + GA
Sbjct: 180 GSPVAAGAPAKQQQVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGA 239
Query: 632 TETVIIISGTPEQTHAAQSLIQAFVMSETETT 663
E I + TPE +A +I + E + T
Sbjct: 240 AEKAISVHSTPEGCSSACKMILEIMHKEAKDT 271
>sp|Q9NZI8|IF2B1_HUMAN Insulin-like growth factor 2 mRNA-binding protein 1 OS=Homo sapiens
GN=IGF2BP1 PE=1 SV=2
Length = 577
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 93/452 (20%), Positives = 182/452 (40%), Gaps = 105/452 (23%)
Query: 38 PSKSFPGGIMFRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEETVSGSDERLVVIEA 97
P+K I R+L P + +IGK+G + I++ T I
Sbjct: 188 PAKQQQVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKI------------------ 229
Query: 98 SDNKKETSENLEASIERSENNGREEASVADESDNKKEDSVNEGSVLMDGLNSEKETSKVQ 157
+ R EN G E +++ S +G +S
Sbjct: 230 -------------DVHRKENAGAAEKAISVHSTP-------------EGCSS-------- 255
Query: 158 KALLLVFERMVEVEPETEVADQENTKSSKFVLRLLVLSTQVGCLLGKGGCVIKQID---- 213
A ++ E M + +T+ AD+ L++L + VG L+GK G +K+++
Sbjct: 256 -ACKMILEIMHKEAKDTKTADE-------VPLKILAHNNFVGRLIGKEGRNLKKVEQDTE 307
Query: 214 -KLPTCALAS------DEVVQITGEVDTVRKALKLISHQLLDNSPRDHESIPGNPTGPSH 266
K+ +L + + + G ++ +A + I ++ + D ++ + SH
Sbjct: 308 TKITISSLQDLTLYNPERTITVKGAIENCCRAEQEIMKKVREAYENDVAAM----SLQSH 363
Query: 267 PLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKPSPEILTFRLLCHDE 326
+P ++++ G + V + + P S + +PE ++ +
Sbjct: 364 LIPGLNLAAVGL-FPASSSAVPPPPSSVTGAAPY---SSFMQ----APEQEMVQVFIPAQ 415
Query: 327 RVGGVIGKGGAIIRSLKQETGCDIKVME-AVSGTEDRLIVISGPAHPDDRISAPQDAVLR 385
VG +IGK G I+ L + IK+ ++ R+++I+GP +A +
Sbjct: 416 AVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITGPP----------EAQFK 465
Query: 386 VQTRIARAIPD------NREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILG 439
Q RI + + E + T + V ++ G ++GKGG + E++ L+ A + ++
Sbjct: 466 AQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEV-VVP 524
Query: 440 KDQIPKCASENEEVVL-INGEFEAVQEALFQI 470
+DQ P EN++V++ I G F A Q A +I
Sbjct: 525 RDQTP---DENDQVIVKIIGHFYASQMAQRKI 553
Score = 38.1 bits (87), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 71/165 (43%), Gaps = 10/165 (6%)
Query: 319 FRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKV--MEAVSGTEDRLIVISGPAHPDDRI 376
RLL + VG +IGK GA IR++ ++T I V E E + V S P +
Sbjct: 198 LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTP----EGC 253
Query: 377 SAPQDAVLRVQTRIARAIPDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSGAYIR 436
S+ +L + + A+ E V ++L +N +G L+GK G + ++ + + I
Sbjct: 254 SSACKMILEIMHKEAKDTKTADE--VPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKIT 311
Query: 437 ILGKDQIPKCASENEEVVLINGEFEAVQEALFQITTRLRHHFFRD 481
I + E + + G E A +I ++R + D
Sbjct: 312 ISSLQDL--TLYNPERTITVKGAIENCCRAEQEIMKKVREAYEND 354
Score = 33.9 bits (76), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 7/92 (7%)
Query: 579 GFPDFVGPPHRRVPVVVP-RSLVPI-----IQGEDGACLKQIRQISDAKITI-TDPKPGA 631
G P G P ++ V +P R LVP I G++GA ++ I + + +KI + GA
Sbjct: 180 GSPVAAGAPAKQQQVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGA 239
Query: 632 TETVIIISGTPEQTHAAQSLIQAFVMSETETT 663
E I + TPE +A +I + E + T
Sbjct: 240 AEKAISVHSTPEGCSSACKMILEIMHKEAKDT 271
>sp|Q8UVD9|FUBP2_CHICK Far upstream element-binding protein 2 OS=Gallus gallus GN=KHSRP
PE=1 SV=1
Length = 769
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 84/196 (42%), Gaps = 31/196 (15%)
Query: 294 MPPSIPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVM 353
+PP + H P P +T D VG +IG+GG I ++Q++GC +++
Sbjct: 193 LPPQLGPMH-------PPPRSTTVTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQIS 245
Query: 354 EAVSGTEDRLIVISGPAHPDDRISAPQDAVLRVQTRIARAIPD---------NREQTVMT 404
G +R + ++G A Q A L + ++R N + +
Sbjct: 246 PDSGGLPERSVSLTGSPE------AVQKAKLMLDDIVSRGRGGPPGQFHDYANGQNGTVQ 299
Query: 405 RLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEV---VLINGEFE 461
+++ + + G ++GKGG I ++++ +G + + + S+N V + I G+
Sbjct: 300 EIMIPAGKAGLVIGKGGETIKQLQERAGVKMIFI------QDGSQNTNVDKPLRIIGDPY 353
Query: 462 AVQEALFQITTRLRHH 477
VQ+A + LR
Sbjct: 354 KVQQACEMVMDILRER 369
>sp|Q756R8|HEK2_ASHGO Heterogeneous nuclear rnp K-like protein 2 OS=Ashbya gossypii
(strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL
Y-1056) GN=HEK2 PE=3 SV=1
Length = 316
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 102/258 (39%), Gaps = 53/258 (20%)
Query: 201 LLGKGGCVIKQIDKLPTCAL--------ASDEVVQITGEVDTVRKALKLISHQLLDNSPR 252
+LG+GG I I K + SD ++++TG +D V +L + L +
Sbjct: 47 ILGRGGNTIDNIRKANGVKIGISTKEKSCSDRLLEVTGSIDAVANSLADVVKVLTADDTN 106
Query: 253 DHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRPKP 312
+ ++ P P + H ++ +PP P E P
Sbjct: 107 EEDAEPE----PEQHIFKH------------------LNFILPPPSPDEAED-----PMK 139
Query: 313 SPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEA-VSGTEDRLIVISGPAH 371
+I RL+ + +V +IG G+ I+ L + V + + ++DR++ I G
Sbjct: 140 VKQIGNLRLIVTNSQVSSIIGTAGSKIKKLIDTHSSKLVVSKTFLPDSQDRILEIQG--F 197
Query: 372 PDDRISAPQDAVLRVQTRIARAIPDNREQT------------VMTRLLVASNQIGCLLGK 419
P+ + +D QT I + D +E+ V + + + +G LLG
Sbjct: 198 PNSIANCIKDIS---QTLIKDDVLDTKEKRYYPHSKHSKDIHVTATVAIPAEYVGALLGH 254
Query: 420 GGSIIAEMRKLSGAYIRI 437
GG+ IA +RK + I +
Sbjct: 255 GGNRIANLRKYTRTKITV 272
>sp|Q96AE4|FUBP1_HUMAN Far upstream element-binding protein 1 OS=Homo sapiens GN=FUBP1
PE=1 SV=3
Length = 644
Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 68/133 (51%), Gaps = 14/133 (10%)
Query: 313 SPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHP 372
S ++T D VG +IG+GG I ++QE+GC I++ G +R +++G P
Sbjct: 97 SRSVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTG--TP 154
Query: 373 DDRISAPQ--DAVLRVQTRIARAI-----PDNREQTVMTRLLVASNQIGCLLGKGGSIIA 425
+ SA + D ++ + R A P N Q +M + +++ G ++GKGG I
Sbjct: 155 ESVQSAKRLLDQIVE-KGRPAPGFHHGDGPGNAVQEIM----IPASKAGLVIGKGGETIK 209
Query: 426 EMRKLSGAYIRIL 438
++++ +G + ++
Sbjct: 210 QLQERAGVKMVMI 222
Score = 35.8 bits (81), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 31/62 (50%)
Query: 595 VPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQA 654
VP +V I G G + +I+Q S KI I G E +++GTPE +A+ L+
Sbjct: 107 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSAKRLLDQ 166
Query: 655 FV 656
V
Sbjct: 167 IV 168
Score = 33.1 bits (74), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 61/307 (19%), Positives = 114/307 (37%), Gaps = 82/307 (26%)
Query: 188 VLRLLVLSTQVGCLLGKGGCVIKQIDKLPTCAL----------ASDEVVQITGEVDTVRK 237
V +++ +++ G ++GKGG IKQ+ + + +D+ ++ITG+ V++
Sbjct: 187 VQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQ 246
Query: 238 ALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPS 297
A +++ + RD V ++ G R + + +P
Sbjct: 247 AKEMVLELI-----RDQGGF-------------REVRNE-----YGSRIGGNEGIDVP-- 281
Query: 298 IPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS 357
IP+F VG VIG+ G +I+ ++ + G I+
Sbjct: 282 IPRFA-------------------------VGIVIGRNGEMIKKIQNDAGVRIQFKPDDG 316
Query: 358 GTEDRLIVISGPAHPDDRISAPQ---DAVLRVQTRIARAIPDNREQTVMT---------- 404
T +R+ I+GP PD A + D + VQ
Sbjct: 317 TTPERIAQITGP--PDRCQHAAEIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPG 374
Query: 405 -----RLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGE 459
+V + + G ++GKGG I + + SGA I + + P A N ++ I G
Sbjct: 375 GLQEFNFIVPTGKTGLIIGKGGETIKSISQQSGARIEL--QRNPPPNADPNMKLFTIRGT 432
Query: 460 FEAVQEA 466
+ + A
Sbjct: 433 PQQIDYA 439
Score = 33.1 bits (74), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 43 PGGIM-FRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEET 84
PGG+ F + P K +IGK GE + ISQ +G I ++
Sbjct: 373 PGGLQEFNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRN 415
>sp|Q91WJ8|FUBP1_MOUSE Far upstream element-binding protein 1 OS=Mus musculus GN=Fubp1
PE=1 SV=1
Length = 651
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 81/172 (47%), Gaps = 18/172 (10%)
Query: 272 SVSSQGAPYATGHRDVADIHLPMPPSIPKFHESGVLDRP----KPSPEILTFRLLCHDER 327
S++S Y R + D P +P ++S P + S ++T D
Sbjct: 48 SLNSNDYGYGGQKRPLEDGDQPDAKKVPPQNDSFGAQLPPMHQQQSRSVMTEEYKVPDGM 107
Query: 328 VGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQ--DAVLR 385
VG +IG+GG I ++QE+GC I++ G +R +++G P+ SA + D ++
Sbjct: 108 VGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTG--TPESVQSAKRLLDQIVE 165
Query: 386 VQTRIARAI-----PDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSG 432
+ R A P N Q +M + +++ G ++GKGG I ++++ +G
Sbjct: 166 -KGRPAPGFHHGDGPGNAVQEIM----IPASKAGLVIGKGGETIKQLQERAG 212
Score = 35.8 bits (81), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 31/62 (50%)
Query: 595 VPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQA 654
VP +V I G G + +I+Q S KI I G E +++GTPE +A+ L+
Sbjct: 103 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSAKRLLDQ 162
Query: 655 FV 656
V
Sbjct: 163 IV 164
Score = 34.3 bits (77), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 62/157 (39%), Gaps = 22/157 (14%)
Query: 328 VGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRISAPQ---DAVL 384
VG VIG+ G +I+ ++ + G I+ T DR+ I+GP PD A + D +
Sbjct: 283 VGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPDRIAQITGP--PDRCQHAAEIITDLLR 340
Query: 385 RVQTRIARAIPDNREQTVMT---------------RLLVASNQIGCLLGKGGSIIAEMRK 429
VQ +V + + G ++GKGG I + +
Sbjct: 341 SVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETIKSISQ 400
Query: 430 LSGAYIRILGKDQIPKCASENEEVVLINGEFEAVQEA 466
SGA I + + P A N ++ I G + + A
Sbjct: 401 QSGARIEL--QRSPPPNADPNMKLFTIRGTPQQIDYA 435
Score = 33.9 bits (76), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 43 PGGIM-FRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEET 84
PGG+ F + P K +IGK GE + ISQ +G I ++ +
Sbjct: 369 PGGLQEFNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRS 411
>sp|Q32PX7|FUBP1_RAT Far upstream element-binding protein 1 OS=Rattus norvegicus
GN=Fubp1 PE=1 SV=1
Length = 639
Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 67/130 (51%), Gaps = 14/130 (10%)
Query: 316 ILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDR 375
++T D VG +IG+GG I ++QE+GC I++ G +R +++G P+
Sbjct: 95 VMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTG--TPESV 152
Query: 376 ISAPQ--DAVLRVQTRIARAI-----PDNREQTVMTRLLVASNQIGCLLGKGGSIIAEMR 428
SA + D ++ + R A P N Q +M + +++ G ++GKGG I +++
Sbjct: 153 QSAKRLLDQIVE-KGRPAPGFHHGDGPGNAVQEIM----IPASKAGLVIGKGGETIKQLQ 207
Query: 429 KLSGAYIRIL 438
+ +G + ++
Sbjct: 208 ERAGVKMVMI 217
Score = 35.8 bits (81), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 31/62 (50%)
Query: 595 VPRSLVPIIQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQA 654
VP +V I G G + +I+Q S KI I G E +++GTPE +A+ L+
Sbjct: 102 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSAKRLLDQ 161
Query: 655 FV 656
V
Sbjct: 162 IV 163
Score = 34.3 bits (77), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 62/307 (20%), Positives = 114/307 (37%), Gaps = 82/307 (26%)
Query: 188 VLRLLVLSTQVGCLLGKGGCVIKQIDKLPTCAL----------ASDEVVQITGEVDTVRK 237
V +++ +++ G ++GKGG IKQ+ + + +D+ ++ITG+ V++
Sbjct: 182 VQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQ 241
Query: 238 ALKLISHQLLDNSPRDHESIPGNPTGPSHPLPDHSVSSQGAPYATGHRDVADIHLPMPPS 297
A +++ + RD V ++ G R + + +P
Sbjct: 242 AKEMVLELI-----RDQGGF-------------REVRNE-----YGSRIGGNEGIDVP-- 276
Query: 298 IPKFHESGVLDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVS 357
IP+F VG VIG+ G +I+ ++ + G I+
Sbjct: 277 IPRFA-------------------------VGIVIGRNGEMIKKIQNDAGVRIQFKPDDG 311
Query: 358 GTEDRLIVISGPAHPDDRISAPQ---DAVLRVQTRIARAIPDNREQTVMT---------- 404
T DR+ I+GP PD A + D + VQ
Sbjct: 312 TTPDRIAQITGP--PDRCQHAAEIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPG 369
Query: 405 -----RLLVASNQIGCLLGKGGSIIAEMRKLSGAYIRILGKDQIPKCASENEEVVLINGE 459
+V + + G ++GKGG I + + SGA I + + P A N ++ I G
Sbjct: 370 GLQEFNFIVPTGKTGLIIGKGGETIKSISQQSGARIEL--QRNPPPNADPNMKLFTIRGT 427
Query: 460 FEAVQEA 466
+ + A
Sbjct: 428 PQQIDYA 434
Score = 33.1 bits (74), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 43 PGGIM-FRVLCPVSKIDGVIGKDGEMMSQISQDTGVTIRVEET 84
PGG+ F + P K +IGK GE + ISQ +G I ++
Sbjct: 368 PGGLQEFNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRN 410
>sp|Q3U0V1|FUBP2_MOUSE Far upstream element-binding protein 2 OS=Mus musculus GN=Khsrp
PE=1 SV=2
Length = 748
Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 77/166 (46%), Gaps = 13/166 (7%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG-PAHPDDR 375
+T D VG +IG+GG I ++Q++GC +++ G +R + ++G P
Sbjct: 146 MTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQKA 205
Query: 376 ISAPQDAVLRVQTRIARAIPDNR---EQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSG 432
D V R + DN + + +++ + + G ++GKGG I ++++ +G
Sbjct: 206 KMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQLQERAG 265
Query: 433 AYIRILGKDQIPKCASENEEV---VLINGEFEAVQEALFQITTRLR 475
+ IL +D S+N V + I G+ VQ+A + LR
Sbjct: 266 VKM-ILIQD-----GSQNTNVDKPLRIIGDPYKVQQACEMVMDILR 305
>sp|Q6CNI6|HEK2_KLULA Heterogeneous nuclear rnp K-like protein 2 OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=HEK2 PE=3 SV=1
Length = 383
Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 70/145 (48%), Gaps = 11/145 (7%)
Query: 307 LDRPKPSPEILTFRLLCHDERVGGVIGKGGAIIRSL-KQETGCDIKVMEAVSGTEDRLIV 365
++ P+ +I RL+C + ++ VIG+ GA I+ L + T + + ++DR++
Sbjct: 152 IEDPEKWKQIGNLRLICTNPQISSVIGQQGAKIKKLIETHTVKLVASKHFLPDSKDRVLE 211
Query: 366 ISG-PAHPDDRISAPQDAVLRVQTRI-ARAIP-------DNREQTVMTRLLVASNQIGCL 416
I G P + I+ + ++ + R +P +E V L + +G L
Sbjct: 212 IQGFPTSVANCINEIAELFIQDDVHVPPRTLPRYYPHSKHTKEIQVSQTLAIPKEFVGAL 271
Query: 417 LGKGGSIIAEMRKLSGAYIRILGKD 441
LG GG+ IA +RK + I ++G+D
Sbjct: 272 LGVGGNRIANLRKFTKTKI-VIGQD 295
Score = 33.9 bits (76), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 29/132 (21%), Positives = 56/132 (42%), Gaps = 24/132 (18%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISGPAHPDDRI 376
+TF +L + +IG G I ++++E I + DRL+ +SGP ++
Sbjct: 59 ITFHVLVSLKEAAKIIGPQGNTIETIRRENDIKIGISPREKSCSDRLLNVSGPPR---QV 115
Query: 377 SAPQDAVLRVQT-------RIARAI--------------PDNREQTVMTRLLVASNQIGC 415
+ VLRV T + + + P+ +Q RL+ + QI
Sbjct: 116 ANSLGQVLRVLTTDYEPEEHVFKHLRFMLPPASKEEIEDPEKWKQIGNLRLICTNPQISS 175
Query: 416 LLGKGGSIIAEM 427
++G+ G+ I ++
Sbjct: 176 VIGQQGAKIKKL 187
>sp|Q92945|FUBP2_HUMAN Far upstream element-binding protein 2 OS=Homo sapiens GN=KHSRP
PE=1 SV=4
Length = 711
Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 77/166 (46%), Gaps = 13/166 (7%)
Query: 317 LTFRLLCHDERVGGVIGKGGAIIRSLKQETGCDIKVMEAVSGTEDRLIVISG-PAHPDDR 375
+T D VG +IG+GG I ++Q++GC +++ G +R + ++G P
Sbjct: 145 MTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQKA 204
Query: 376 ISAPQDAVLRVQTRIARAIPDNR---EQTVMTRLLVASNQIGCLLGKGGSIIAEMRKLSG 432
D V R + DN + + +++ + + G ++GKGG I ++++ +G
Sbjct: 205 KMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQLQERAG 264
Query: 433 AYIRILGKDQIPKCASENEEV---VLINGEFEAVQEALFQITTRLR 475
+ IL +D S+N V + I G+ VQ+A + LR
Sbjct: 265 VKM-ILIQD-----GSQNTNVDKPLRIIGDPYKVQQACEMVMDILR 304
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.135 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 269,226,904
Number of Sequences: 539616
Number of extensions: 12822610
Number of successful extensions: 39007
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 326
Number of HSP's successfully gapped in prelim test: 378
Number of HSP's that attempted gapping in prelim test: 36457
Number of HSP's gapped (non-prelim): 2662
length of query: 663
length of database: 191,569,459
effective HSP length: 124
effective length of query: 539
effective length of database: 124,657,075
effective search space: 67190163425
effective search space used: 67190163425
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 65 (29.6 bits)