Query 045773
Match_columns 303
No_of_seqs 169 out of 266
Neff 4.9
Searched_HMMs 13730
Date Mon Mar 25 09:01:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045773.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/045773hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2vqca1 a.4.5.78 (A:4-73) F-11 50.0 5.4 0.0004 27.5 2.8 34 126-161 22-56 (70)
2 d1miwa1 a.173.1.1 (A:140-404) 17.0 87 0.0063 24.4 5.2 45 128-179 213-257 (265)
3 d1r4pb_ b.40.2.1 (B:) Verotoxi 14.3 15 0.0011 25.3 -0.3 12 52-63 4-15 (70)
4 d1e3ja1 b.35.1.2 (A:4-142,A:31 14.0 42 0.003 25.6 2.3 39 226-266 5-45 (178)
5 d1c4qa_ b.40.2.1 (A:) Verotoxi 13.8 16 0.0011 25.2 -0.4 12 52-63 5-16 (69)
6 d2jdqd1 d.361.1.1 (D:688-756) 13.5 91 0.0066 21.1 3.7 28 274-302 25-52 (69)
7 d1h9ma2 b.40.6.2 (A:74-141) Cy 12.2 1.5E+02 0.011 19.2 4.6 26 269-295 39-64 (68)
8 d1piwa1 b.35.1.2 (A:1-152,A:32 10.7 15 0.0011 29.3 -1.5 16 252-267 39-54 (192)
9 d1guta_ b.40.6.1 (A:) Molybdat 10.2 1.8E+02 0.013 18.7 4.5 23 270-293 40-62 (67)
10 d1i8ya_ g.3.16.1 (A:) N-termin 9.9 35 0.0025 19.5 0.3 9 223-231 17-25 (28)
No 1
>d2vqca1 a.4.5.78 (A:4-73) F-112 {Sulfolobus virus-like particle SSV1 [TaxId: 244589]}
Probab=50.02 E-value=5.4 Score=27.50 Aligned_cols=34 Identities=32% Similarity=0.427 Sum_probs=27.0
Q ss_pred cHHHHHHHhCCCCCchHHHHHHHHH-HHhccCCCCCC
Q 045773 126 KLNQLKEIFHASDNSTMESIIKDAL-SDCERAPSKGE 161 (303)
Q Consensus 126 ~l~~iL~~F~i~~~S~~A~~m~~Tl-~~CE~~~~~GE 161 (303)
.|.+||+.|-|+. +-|-.+++|| ..||+-|.+-|
T Consensus 22 ~ledilaqfeis~--~~ayniqr~l~~ice~hpdece 56 (70)
T d2vqca1 22 TLEDILAQFEISV--PSAYNIQRALKAICERHPDECE 56 (70)
T ss_dssp CHHHHHHHHCCCH--HHHHHHHHHHHHHHHHCTTTEE
T ss_pred cHHHHHHHheecc--chHhHHHHHHHHHHhcCCchhh
Confidence 4789999999864 5677899999 57999877554
No 2
>d1miwa1 a.173.1.1 (A:140-404) tRNA CCA-adding enzyme, C-terminal domains {Bacillus stearothermophilus [TaxId: 1422]}
Probab=17.01 E-value=87 Score=24.37 Aligned_cols=45 Identities=13% Similarity=0.129 Sum_probs=31.6
Q ss_pred HHHHHHhCCCCCchHHHHHHHHHHHhccCCCCCCcccccCChHHHHHHHHhh
Q 045773 128 NQLKEIFHASDNSTMESIIKDALSDCERAPSKGETKRCVGSAEDMIDFATSV 179 (303)
Q Consensus 128 ~~iL~~F~i~~~S~~A~~m~~Tl~~CE~~~~~GE~K~CaTSLESMvdFa~S~ 179 (303)
.+|++.++++||..+.+++.. .+..-+.|+ +.++-|++++|+.+.
T Consensus 213 ~dL~~~~g~~pGp~iG~il~~----l~~~~l~~~---~~n~ke~l~~~l~~~ 257 (265)
T d1miwa1 213 KDVIEWVGKPAGPWVKEALDA----IWRAVVNGE---VENEKERIYAWLMER 257 (265)
T ss_dssp HHHHHHHTCCSSHHHHHHHHH----HHHHHHTTS---SCSCHHHHHHHHHHH
T ss_pred HHHHHHcCCCCCHHHHHHHHH----HHHHHHcCC---CCCCHHHHHHHHHHh
Confidence 367888999998776655444 444444454 567999999998754
No 3
>d1r4pb_ b.40.2.1 (B:) Verotoxin-1/shiga-toxin, B-pentamer {Shigella dysenteriae, toxin II [TaxId: 622]}
Probab=14.35 E-value=15 Score=25.27 Aligned_cols=12 Identities=42% Similarity=0.797 Sum_probs=7.4
Q ss_pred ccCceeeeeecC
Q 045773 52 AKSGVTFANYTE 63 (303)
Q Consensus 52 ~k~~v~f~~y~~ 63 (303)
+|++|.|..|+.
T Consensus 4 a~gkiefskyne 15 (70)
T d1r4pb_ 4 AKGKIEFSKYNE 15 (70)
T ss_dssp EEECEEEEEECT
T ss_pred ccceEEEEeecC
Confidence 455666666654
No 4
>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}
Probab=14.01 E-value=42 Score=25.62 Aligned_cols=39 Identities=26% Similarity=0.338 Sum_probs=22.5
Q ss_pred eeeEeeeeCceeEEEEEeecCcCcc--cceEEEEEeecCCCCC
Q 045773 226 LLYYCHSVPEVRVYEADILEPKTMA--KINHGVAICHLDTSSW 266 (303)
Q Consensus 226 aVyyCH~v~~trvY~V~L~~~d~~g--~~~~avAVCH~DTS~W 266 (303)
||+| ....-++=++++-....+. -++++.+|||.|...|
T Consensus 5 AVl~--g~~~l~~~e~~~P~~~~~evlVkv~a~gic~sD~~~~ 45 (178)
T d1e3ja1 5 AVLY--KQNDLRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYY 45 (178)
T ss_dssp EEEE--ETTEEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHH
T ss_pred EEEE--cCCcEEEEEeECCCCCCCEEEEEEEEEcccCchhhhh
Confidence 4554 3344555555554333212 2688999999997433
No 5
>d1c4qa_ b.40.2.1 (A:) Verotoxin-1/shiga-toxin, B-pentamer {Escherichia coli [TaxId: 562]}
Probab=13.76 E-value=16 Score=25.16 Aligned_cols=12 Identities=17% Similarity=0.565 Sum_probs=6.7
Q ss_pred ccCceeeeeecC
Q 045773 52 AKSGVTFANYTE 63 (303)
Q Consensus 52 ~k~~v~f~~y~~ 63 (303)
+|++|.|..|+.
T Consensus 5 a~gkiefskyne 16 (69)
T d1c4qa_ 5 VTGKVEYTKYND 16 (69)
T ss_dssp EEEEEEEEEECT
T ss_pred ccceEEEEeecC
Confidence 455566666654
No 6
>d2jdqd1 d.361.1.1 (D:688-756) Polymerase basic protein 2, BP2 {Influenza A virus [TaxId: 11320]}
Probab=13.53 E-value=91 Score=21.13 Aligned_cols=28 Identities=14% Similarity=0.096 Sum_probs=22.3
Q ss_pred HhhCCCCCCCceeeEEeCCceEEeecCCC
Q 045773 274 LTLGSSPGRIEVCHWIFENDLTWTIADVR 302 (303)
Q Consensus 274 ~~L~~kPG~~~VCHfi~~~~ivWvp~~~~ 302 (303)
++-+.+||+ ..--||.+++++||..-.|
T Consensus 25 eLs~L~kGE-kANvligqg~~v~v~krkr 52 (69)
T d2jdqd1 25 ELSNLAKGE-KANVLIGQGDVVLVMKRKR 52 (69)
T ss_dssp GGGGSCTTC-EEEEEEETTEEEEEEESCC
T ss_pred HHhhcCccc-cccEEEeCCCEEEEEEecc
Confidence 345678997 6778999999999986554
No 7
>d1h9ma2 b.40.6.2 (A:74-141) Cytoplasmic molybdate-binding protein ModG {Azotobacter vinelandii [TaxId: 354]}
Probab=12.20 E-value=1.5e+02 Score=19.19 Aligned_cols=26 Identities=31% Similarity=0.413 Sum_probs=19.4
Q ss_pred ChhHHHhhCCCCCCCceeeEEeCCceE
Q 045773 269 THEAFLTLGSSPGRIEVCHWIFENDLT 295 (303)
Q Consensus 269 ~H~aF~~L~~kPG~~~VCHfi~~~~iv 295 (303)
..-+++.|+++||. +|+=.+...+++
T Consensus 39 T~~s~~~L~L~~G~-~V~a~iKa~~Vi 64 (68)
T d1h9ma2 39 TKEAVAELGLKPGA-SASAVIKASNVI 64 (68)
T ss_dssp EHHHHHHTTCCTTC-EEEEEECGGGCE
T ss_pred CHHHHhhCCCCCCC-EEEEEEEccEEE
Confidence 35689999999997 777666655543
No 8
>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=10.65 E-value=15 Score=29.29 Aligned_cols=16 Identities=13% Similarity=0.191 Sum_probs=12.8
Q ss_pred ceEEEEEeecCCCCCC
Q 045773 252 INHGVAICHLDTSSWS 267 (303)
Q Consensus 252 ~~~avAVCH~DTS~W~ 267 (303)
++++.+|||.|...|.
T Consensus 39 kv~a~giC~sDl~~~~ 54 (192)
T d1piwa1 39 KIEACGVCGSDIHCAA 54 (192)
T ss_dssp EEEEEEECHHHHHHHT
T ss_pred EEeeeCCCcchHHHHc
Confidence 6889999999965443
No 9
>d1guta_ b.40.6.1 (A:) Molybdate/tungstate binding protein MOP {Clostridium pasteurianum, MOP II [TaxId: 1501]}
Probab=10.24 E-value=1.8e+02 Score=18.70 Aligned_cols=23 Identities=22% Similarity=0.306 Sum_probs=16.2
Q ss_pred hhHHHhhCCCCCCCceeeEEeCCc
Q 045773 270 HEAFLTLGSSPGRIEVCHWIFEND 293 (303)
Q Consensus 270 H~aF~~L~~kPG~~~VCHfi~~~~ 293 (303)
.-+++.|+++||. +|.=.+...+
T Consensus 40 ~~s~~~L~L~~G~-~V~a~iKa~~ 62 (67)
T d1guta_ 40 LDSVEELGVKEGA-ELTAVVKSTD 62 (67)
T ss_dssp HHHHHHHTCCTTC-EEEEECCGGG
T ss_pred HHHHHHCCCCCCC-EEEEEEEhhe
Confidence 5689999999997 5554444333
No 10
>d1i8ya_ g.3.16.1 (A:) N-terminal domain of granulin-1 {Carp (Cyprinus carpio) [TaxId: 7962]}
Probab=9.86 E-value=35 Score=19.52 Aligned_cols=9 Identities=44% Similarity=1.261 Sum_probs=7.2
Q ss_pred CceeeeEee
Q 045773 223 YPYLLYYCH 231 (303)
Q Consensus 223 yPYaVyyCH 231 (303)
=||-|.||-
T Consensus 17 spygvw~c~ 25 (28)
T d1i8ya_ 17 SPYGVWYCS 25 (28)
T ss_dssp CTTSCEEEE
T ss_pred cCcccEEec
Confidence 488999994
Done!