Query 045774
Match_columns 275
No_of_seqs 128 out of 1854
Neff 9.9
Searched_HMMs 46136
Date Fri Mar 29 05:24:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045774.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/045774hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02824 hydrolase, alpha/beta 100.0 1.9E-39 4E-44 275.0 25.5 256 14-273 19-293 (294)
2 PRK10349 carboxylesterase BioH 100.0 4.5E-39 9.7E-44 267.3 25.6 248 15-273 4-255 (256)
3 PRK03592 haloalkane dehalogena 100.0 3.7E-38 8E-43 267.1 25.4 250 14-274 18-289 (295)
4 TIGR02240 PHA_depoly_arom poly 100.0 1.2E-37 2.6E-42 261.6 22.8 244 14-274 13-266 (276)
5 PLN02679 hydrolase, alpha/beta 100.0 3.5E-37 7.7E-42 267.6 25.3 253 14-273 73-356 (360)
6 PRK00870 haloalkane dehalogena 100.0 4.9E-37 1.1E-41 261.1 22.1 251 14-273 35-300 (302)
7 TIGR01738 bioH putative pimelo 100.0 1.7E-36 3.8E-41 248.2 24.1 241 21-271 1-245 (245)
8 PLN02965 Probable pheophorbida 100.0 1.1E-36 2.4E-41 252.8 22.7 234 26-273 5-252 (255)
9 TIGR03343 biphenyl_bphD 2-hydr 100.0 8.3E-36 1.8E-40 250.9 25.5 249 14-272 21-281 (282)
10 PLN02578 hydrolase 100.0 1.4E-35 3E-40 257.3 27.0 250 14-272 77-353 (354)
11 PRK06489 hypothetical protein; 100.0 8.9E-36 1.9E-40 259.1 24.8 251 14-273 51-356 (360)
12 KOG4178 Soluble epoxide hydrol 100.0 9.1E-36 2E-40 244.2 21.3 257 15-273 34-319 (322)
13 PRK03204 haloalkane dehalogena 100.0 4.9E-36 1.1E-40 252.9 20.4 246 14-272 25-286 (286)
14 TIGR02427 protocat_pcaD 3-oxoa 100.0 4.2E-35 9E-40 240.7 22.1 248 14-272 1-251 (251)
15 PRK10673 acyl-CoA esterase; Pr 100.0 9.4E-35 2E-39 240.9 23.5 240 15-273 3-254 (255)
16 PRK11126 2-succinyl-6-hydroxy- 100.0 4.3E-35 9.3E-40 241.2 21.0 234 24-273 2-241 (242)
17 PLN03084 alpha/beta hydrolase 100.0 2.1E-34 4.5E-39 249.9 25.4 252 14-273 116-383 (383)
18 PRK08775 homoserine O-acetyltr 100.0 1.8E-35 3.9E-40 255.6 18.3 245 14-274 47-339 (343)
19 PLN03087 BODYGUARD 1 domain co 100.0 2.1E-34 4.5E-39 254.7 25.3 247 14-273 187-478 (481)
20 TIGR03611 RutD pyrimidine util 100.0 2E-34 4.4E-39 238.1 23.7 248 15-273 1-257 (257)
21 PRK07581 hypothetical protein; 100.0 1.9E-34 4.2E-39 249.0 24.1 259 14-274 27-336 (339)
22 TIGR03056 bchO_mg_che_rel puta 100.0 3.7E-34 8.1E-39 239.9 23.8 247 15-272 18-278 (278)
23 TIGR01392 homoserO_Ac_trn homo 100.0 2.2E-34 4.7E-39 249.6 22.6 259 13-272 16-351 (351)
24 PRK00175 metX homoserine O-ace 100.0 2.1E-33 4.7E-38 245.4 24.6 261 14-274 34-374 (379)
25 PLN02385 hydrolase; alpha/beta 100.0 2.3E-33 5E-38 243.1 22.1 250 15-274 74-345 (349)
26 PF12697 Abhydrolase_6: Alpha/ 100.0 9E-34 1.9E-38 229.0 16.2 226 27-266 1-228 (228)
27 PHA02857 monoglyceride lipase; 100.0 1.9E-32 4.2E-37 229.9 23.0 245 14-274 12-273 (276)
28 PLN02211 methyl indole-3-aceta 100.0 9.9E-33 2.2E-37 230.9 20.3 236 23-273 17-269 (273)
29 KOG1454 Predicted hydrolase/ac 100.0 1.6E-32 3.6E-37 233.2 16.8 242 24-274 58-324 (326)
30 TIGR01250 pro_imino_pep_2 prol 100.0 6.2E-31 1.3E-35 220.5 25.5 251 15-272 14-288 (288)
31 PRK10749 lysophospholipase L2; 100.0 7.7E-31 1.7E-35 225.5 26.5 255 14-275 42-330 (330)
32 TIGR03695 menH_SHCHC 2-succiny 100.0 3.3E-31 7.2E-36 217.1 22.9 242 25-272 2-251 (251)
33 PLN02894 hydrolase, alpha/beta 100.0 1.5E-30 3.2E-35 228.6 24.9 249 24-273 105-384 (402)
34 PLN02298 hydrolase, alpha/beta 100.0 3E-30 6.4E-35 222.1 24.8 248 14-274 44-317 (330)
35 PLN02980 2-oxoglutarate decarb 100.0 1.1E-30 2.4E-35 260.8 24.7 254 16-273 1361-1638(1655)
36 KOG4409 Predicted hydrolase/ac 100.0 3.2E-30 6.9E-35 212.2 22.2 249 23-273 89-363 (365)
37 PRK14875 acetoin dehydrogenase 100.0 4.1E-30 9E-35 224.5 20.5 242 15-273 121-370 (371)
38 PRK06765 homoserine O-acetyltr 100.0 8.5E-29 1.9E-33 215.3 23.9 260 14-274 42-388 (389)
39 TIGR01249 pro_imino_pep_1 prol 100.0 1.1E-28 2.3E-33 210.2 21.2 253 14-273 16-304 (306)
40 KOG2984 Predicted hydrolase [G 100.0 2.8E-29 6.1E-34 190.7 12.5 243 13-274 31-276 (277)
41 PLN02652 hydrolase; alpha/beta 100.0 3.3E-28 7.2E-33 212.4 21.2 248 14-274 122-387 (395)
42 PRK05855 short chain dehydroge 100.0 9.7E-29 2.1E-33 227.9 18.6 254 14-273 14-291 (582)
43 KOG2382 Predicted alpha/beta h 100.0 9.1E-27 2E-31 191.4 19.9 233 24-274 52-313 (315)
44 KOG1455 Lysophospholipase [Lip 99.9 4E-26 8.7E-31 184.8 20.1 239 26-274 56-312 (313)
45 PLN02511 hydrolase 99.9 5.4E-27 1.2E-31 205.3 14.6 242 23-273 99-364 (388)
46 COG2267 PldB Lysophospholipase 99.9 6.2E-25 1.3E-29 185.1 20.9 247 15-273 22-293 (298)
47 TIGR01607 PST-A Plasmodium sub 99.9 2.1E-24 4.5E-29 185.4 22.4 254 15-273 10-332 (332)
48 PF00561 Abhydrolase_1: alpha/ 99.9 4.8E-26 1E-30 185.2 10.2 212 51-268 1-229 (230)
49 COG0596 MhpC Predicted hydrola 99.9 3.7E-23 8E-28 169.7 21.8 252 15-272 12-280 (282)
50 TIGR03100 hydr1_PEP hydrolase, 99.9 2.1E-23 4.6E-28 174.7 18.5 225 25-273 27-274 (274)
51 COG1647 Esterase/lipase [Gener 99.9 3.8E-23 8.2E-28 159.9 18.2 224 23-273 14-243 (243)
52 PRK10985 putative hydrolase; P 99.9 2.8E-23 6.1E-28 178.1 18.7 245 24-272 58-318 (324)
53 PRK05077 frsA fermentation/res 99.9 1.9E-22 4.2E-27 177.5 23.1 212 25-274 195-412 (414)
54 COG2021 MET2 Homoserine acetyl 99.9 3.7E-22 7.9E-27 166.5 23.1 259 15-273 38-367 (368)
55 TIGR01838 PHA_synth_I poly(R)- 99.9 2.6E-22 5.6E-27 179.6 20.5 241 13-261 175-462 (532)
56 PRK11071 esterase YqiA; Provis 99.9 3.1E-22 6.6E-27 158.4 18.4 183 25-272 2-189 (190)
57 PRK10566 esterase; Provisional 99.9 6.3E-21 1.4E-25 157.6 19.9 205 25-274 28-248 (249)
58 TIGR01836 PHA_synth_III_C poly 99.9 7E-21 1.5E-25 165.1 20.9 241 25-274 63-350 (350)
59 PRK13604 luxD acyl transferase 99.9 4E-20 8.7E-25 153.8 19.7 205 25-263 38-252 (307)
60 PLN02872 triacylglycerol lipas 99.9 1.1E-20 2.5E-25 164.6 14.8 250 24-274 74-389 (395)
61 PRK07868 acyl-CoA synthetase; 99.8 1.8E-19 3.8E-24 175.0 22.5 243 25-274 68-361 (994)
62 KOG2564 Predicted acetyltransf 99.8 2.6E-20 5.6E-25 148.8 13.6 230 25-273 75-326 (343)
63 PF12695 Abhydrolase_5: Alpha/ 99.8 1E-18 2.2E-23 132.2 15.6 144 26-254 1-145 (145)
64 PF03096 Ndr: Ndr family; Int 99.8 2.3E-17 5.1E-22 134.7 20.0 248 12-273 8-278 (283)
65 TIGR03101 hydr2_PEP hydrolase, 99.8 2.4E-18 5.2E-23 142.2 11.7 100 25-128 26-133 (266)
66 KOG2931 Differentiation-relate 99.8 9.7E-17 2.1E-21 129.4 18.2 253 12-273 31-305 (326)
67 COG3208 GrsT Predicted thioest 99.7 3.9E-16 8.5E-21 123.8 19.5 220 26-272 9-234 (244)
68 PRK11460 putative hydrolase; P 99.7 1.4E-16 3.1E-21 130.1 17.2 177 23-273 15-211 (232)
69 KOG1552 Predicted alpha/beta h 99.7 1.2E-16 2.5E-21 127.6 14.6 186 25-272 61-250 (258)
70 TIGR03230 lipo_lipase lipoprot 99.7 9.2E-17 2E-21 140.3 14.1 103 23-129 40-154 (442)
71 KOG4667 Predicted esterase [Li 99.7 1.4E-15 3.1E-20 117.4 17.2 204 20-259 30-244 (269)
72 PF06342 DUF1057: Alpha/beta h 99.7 3.7E-15 8E-20 120.5 18.9 225 26-272 37-297 (297)
73 PLN02442 S-formylglutathione h 99.7 6.6E-15 1.4E-19 123.9 21.0 106 23-128 46-177 (283)
74 TIGR02821 fghA_ester_D S-formy 99.7 9.6E-15 2.1E-19 122.5 20.6 105 24-128 42-172 (275)
75 PLN00021 chlorophyllase 99.7 3E-15 6.5E-20 127.0 17.1 100 25-128 53-165 (313)
76 cd00707 Pancreat_lipase_like P 99.7 5.1E-16 1.1E-20 129.8 11.2 111 15-129 27-147 (275)
77 PF00975 Thioesterase: Thioest 99.6 3.1E-14 6.7E-19 116.1 18.2 218 26-271 2-229 (229)
78 TIGR03502 lipase_Pla1_cef extr 99.6 2.4E-14 5.2E-19 132.6 17.9 91 25-115 450-576 (792)
79 TIGR01839 PHA_synth_II poly(R) 99.6 7.9E-14 1.7E-18 124.3 19.9 227 24-260 215-487 (560)
80 PF00326 Peptidase_S9: Prolyl 99.6 7E-15 1.5E-19 118.7 12.2 194 40-274 3-209 (213)
81 KOG4391 Predicted alpha/beta h 99.6 3.8E-14 8.2E-19 109.7 11.7 200 22-273 76-281 (300)
82 TIGR01840 esterase_phb esteras 99.6 2.5E-13 5.4E-18 109.6 16.3 107 23-129 12-130 (212)
83 COG0429 Predicted hydrolase of 99.5 4.1E-13 8.9E-18 111.0 16.8 237 25-272 76-338 (345)
84 PF02230 Abhydrolase_2: Phosph 99.5 5.9E-13 1.3E-17 107.7 17.5 180 22-274 12-215 (216)
85 TIGR00976 /NonD putative hydro 99.5 2.1E-13 4.6E-18 125.0 15.1 102 24-130 22-133 (550)
86 PRK10252 entF enterobactin syn 99.5 7.4E-13 1.6E-17 133.0 19.0 102 21-129 1066-1171(1296)
87 PF06821 Ser_hydrolase: Serine 99.5 9.1E-13 2E-17 102.0 13.8 159 27-263 1-162 (171)
88 COG1506 DAP2 Dipeptidyl aminop 99.5 1.4E-12 3.1E-17 120.9 16.4 207 25-274 395-616 (620)
89 PF05448 AXE1: Acetyl xylan es 99.5 1.2E-11 2.7E-16 105.2 20.4 212 25-273 84-319 (320)
90 KOG2565 Predicted hydrolases o 99.5 3.3E-12 7.1E-17 106.5 16.0 96 26-124 154-259 (469)
91 TIGR01849 PHB_depoly_PhaZ poly 99.5 1E-11 2.2E-16 107.7 18.8 244 25-273 103-405 (406)
92 KOG1838 Alpha/beta hydrolase [ 99.5 1.5E-11 3.1E-16 105.4 19.2 225 23-259 124-368 (409)
93 PF06500 DUF1100: Alpha/beta h 99.4 8.2E-12 1.8E-16 107.5 14.3 209 25-273 191-408 (411)
94 PF10230 DUF2305: Uncharacteri 99.4 2.1E-10 4.6E-15 95.4 21.8 103 25-127 3-120 (266)
95 PF01738 DLH: Dienelactone hyd 99.4 2.5E-11 5.4E-16 98.3 15.4 166 24-261 14-196 (218)
96 PF05728 UPF0227: Uncharacteri 99.4 1E-10 2.3E-15 91.6 18.0 179 27-271 2-186 (187)
97 COG0400 Predicted esterase [Ge 99.4 2.9E-11 6.4E-16 95.9 15.0 170 24-274 18-205 (207)
98 PRK10162 acetyl esterase; Prov 99.3 2.4E-10 5.2E-15 97.9 18.8 99 23-128 80-194 (318)
99 PF12146 Hydrolase_4: Putative 99.3 6.5E-12 1.4E-16 84.2 7.1 73 14-89 3-79 (79)
100 COG3458 Acetyl esterase (deace 99.3 6.4E-11 1.4E-15 95.1 13.8 210 25-274 84-317 (321)
101 PF06028 DUF915: Alpha/beta hy 99.3 1.2E-10 2.5E-15 95.6 14.9 203 25-272 12-253 (255)
102 COG0412 Dienelactone hydrolase 99.3 3E-10 6.5E-15 92.8 16.1 175 12-259 14-207 (236)
103 PF07819 PGAP1: PGAP1-like pro 99.2 1E-10 2.2E-15 94.9 11.2 97 25-128 5-122 (225)
104 PF08538 DUF1749: Protein of u 99.2 3.2E-10 6.9E-15 94.0 13.6 227 25-272 34-303 (303)
105 COG3243 PhaC Poly(3-hydroxyalk 99.2 9.6E-10 2.1E-14 93.9 15.8 227 23-260 106-376 (445)
106 COG3545 Predicted esterase of 99.2 3E-09 6.4E-14 80.4 14.9 172 25-273 3-178 (181)
107 PTZ00472 serine carboxypeptida 99.2 3.4E-09 7.3E-14 94.8 17.9 103 24-128 77-215 (462)
108 COG4757 Predicted alpha/beta h 99.1 2E-09 4.2E-14 84.7 13.3 233 26-271 32-280 (281)
109 PRK05371 x-prolyl-dipeptidyl a 99.1 7.4E-09 1.6E-13 97.9 19.5 208 48-273 277-518 (767)
110 COG3319 Thioesterase domains o 99.1 7.5E-10 1.6E-14 90.6 11.0 100 25-130 1-104 (257)
111 PLN02733 phosphatidylcholine-s 99.1 3.6E-10 7.8E-15 99.7 8.1 92 35-128 105-200 (440)
112 PF09752 DUF2048: Uncharacteri 99.0 5.9E-08 1.3E-12 81.9 18.4 237 24-273 92-348 (348)
113 COG2945 Predicted hydrolase of 99.0 2.1E-08 4.6E-13 76.8 14.2 170 24-272 28-205 (210)
114 PF02129 Peptidase_S15: X-Pro 99.0 7E-09 1.5E-13 86.9 12.9 103 25-132 21-139 (272)
115 PF03959 FSH1: Serine hydrolas 99.0 5.2E-09 1.1E-13 84.3 11.2 168 24-261 4-208 (212)
116 PF01674 Lipase_2: Lipase (cla 98.9 1.3E-09 2.9E-14 87.3 5.8 99 25-125 2-105 (219)
117 PRK04940 hypothetical protein; 98.9 2.2E-07 4.9E-12 71.6 17.5 52 216-272 127-178 (180)
118 PRK10115 protease 2; Provision 98.9 9.9E-08 2.1E-12 89.6 17.4 105 24-128 445-558 (686)
119 PF12740 Chlorophyllase2: Chlo 98.9 8.9E-09 1.9E-13 83.9 8.8 100 25-128 18-130 (259)
120 PF02273 Acyl_transf_2: Acyl t 98.9 1.8E-07 4E-12 74.4 14.7 206 24-263 30-245 (294)
121 smart00824 PKS_TE Thioesterase 98.8 4.1E-08 8.9E-13 78.3 11.0 89 35-129 10-102 (212)
122 COG3571 Predicted hydrolase of 98.8 5.9E-07 1.3E-11 66.9 15.7 159 26-255 16-182 (213)
123 PF08840 BAAT_C: BAAT / Acyl-C 98.8 1.6E-08 3.5E-13 81.5 7.4 50 80-130 5-57 (213)
124 PF00151 Lipase: Lipase; Inte 98.8 2.4E-08 5.2E-13 85.4 8.5 104 22-129 69-187 (331)
125 PF05990 DUF900: Alpha/beta hy 98.7 9.9E-08 2.1E-12 77.8 9.8 102 23-127 17-135 (233)
126 PF06057 VirJ: Bacterial virul 98.7 5.6E-07 1.2E-11 69.7 12.6 95 26-129 4-107 (192)
127 PF04301 DUF452: Protein of un 98.7 8.5E-07 1.8E-11 70.4 13.8 193 22-257 9-205 (213)
128 PF07859 Abhydrolase_3: alpha/ 98.7 1.2E-07 2.6E-12 76.2 9.2 91 27-128 1-109 (211)
129 PF10503 Esterase_phd: Esteras 98.7 3.9E-07 8.4E-12 73.3 11.8 106 24-129 16-132 (220)
130 COG4188 Predicted dienelactone 98.7 6.4E-08 1.4E-12 81.9 7.4 212 25-263 72-303 (365)
131 PF05057 DUF676: Putative seri 98.6 7.2E-08 1.6E-12 77.9 6.8 83 24-111 4-95 (217)
132 KOG1553 Predicted alpha/beta h 98.6 1.7E-07 3.7E-12 78.0 8.5 97 21-125 240-341 (517)
133 KOG4627 Kynurenine formamidase 98.6 6.8E-07 1.5E-11 69.3 11.1 188 17-260 58-253 (270)
134 PF07224 Chlorophyllase: Chlor 98.6 1.6E-07 3.5E-12 75.5 7.6 100 25-128 47-156 (307)
135 KOG3975 Uncharacterized conser 98.6 1.8E-05 4E-10 63.3 18.9 241 22-271 27-300 (301)
136 PF11339 DUF3141: Protein of u 98.6 1.1E-05 2.3E-10 71.2 18.4 207 42-258 92-352 (581)
137 KOG2112 Lysophospholipase [Lip 98.5 1E-06 2.2E-11 68.7 10.5 100 26-125 5-124 (206)
138 COG1075 LipA Predicted acetylt 98.5 3.2E-07 6.9E-12 79.0 8.0 97 26-128 61-163 (336)
139 KOG2624 Triglyceride lipase-ch 98.5 4.2E-06 9.2E-11 73.0 15.0 108 22-129 71-199 (403)
140 COG0657 Aes Esterase/lipase [L 98.5 5.6E-06 1.2E-10 70.8 14.7 98 24-128 79-190 (312)
141 KOG2551 Phospholipase/carboxyh 98.5 1.9E-05 4.1E-10 62.3 15.8 60 209-272 159-218 (230)
142 KOG2100 Dipeptidyl aminopeptid 98.4 5.7E-06 1.2E-10 78.4 14.3 203 25-275 527-748 (755)
143 PF03403 PAF-AH_p_II: Platelet 98.4 5.2E-07 1.1E-11 78.8 6.7 103 25-128 101-261 (379)
144 PRK10439 enterobactin/ferric e 98.3 4.7E-06 1E-10 73.7 10.9 100 25-128 210-322 (411)
145 COG4814 Uncharacterized protei 98.3 4.1E-06 8.9E-11 67.2 8.5 103 26-128 47-175 (288)
146 KOG1515 Arylacetamide deacetyl 98.3 3.6E-05 7.7E-10 65.8 14.8 109 13-128 72-206 (336)
147 PF10142 PhoPQ_related: PhoPQ- 98.3 1.7E-05 3.6E-10 68.4 12.1 154 84-273 159-319 (367)
148 PF03583 LIP: Secretory lipase 98.2 5.1E-05 1.1E-09 64.1 14.3 69 44-114 20-91 (290)
149 PF00756 Esterase: Putative es 98.2 2E-06 4.3E-11 71.1 5.4 104 25-128 25-149 (251)
150 PF12715 Abhydrolase_7: Abhydr 98.1 1.7E-05 3.7E-10 67.9 9.0 101 25-126 116-257 (390)
151 PF05677 DUF818: Chlamydia CHL 98.1 2.2E-05 4.7E-10 66.0 8.8 85 24-115 137-236 (365)
152 KOG3724 Negative regulator of 98.1 1.8E-05 4E-10 72.7 8.5 89 26-122 91-209 (973)
153 PF05577 Peptidase_S28: Serine 98.0 2E-05 4.2E-10 70.6 8.2 120 9-128 12-147 (434)
154 PF08386 Abhydrolase_4: TAP-li 98.0 2.5E-05 5.5E-10 55.2 7.1 61 212-273 33-93 (103)
155 KOG3043 Predicted hydrolase re 98.0 0.00019 4.1E-09 56.8 12.2 161 26-262 41-222 (242)
156 KOG3253 Predicted alpha/beta h 98.0 0.00022 4.8E-09 64.0 13.7 159 24-259 176-350 (784)
157 COG3509 LpqC Poly(3-hydroxybut 98.0 9.4E-05 2E-09 61.0 10.7 107 22-129 59-179 (312)
158 COG4782 Uncharacterized protei 98.0 5.5E-05 1.2E-09 64.0 9.1 106 22-127 114-232 (377)
159 PF02450 LCAT: Lecithin:choles 98.0 3E-05 6.5E-10 68.3 7.9 78 39-128 66-159 (389)
160 KOG2281 Dipeptidyl aminopeptid 97.9 0.00019 4.1E-09 64.9 12.4 205 25-273 643-866 (867)
161 COG3150 Predicted esterase [Ge 97.8 0.00015 3.3E-09 54.7 8.3 83 27-123 2-86 (191)
162 PF12048 DUF3530: Protein of u 97.8 0.00035 7.6E-09 59.5 10.8 102 26-127 89-227 (310)
163 KOG3847 Phospholipase A2 (plat 97.7 0.0004 8.7E-09 57.7 10.4 42 23-64 117-159 (399)
164 PLN02606 palmitoyl-protein thi 97.7 0.00032 6.9E-09 58.6 9.6 97 25-128 27-131 (306)
165 COG4099 Predicted peptidase [G 97.7 0.0003 6.6E-09 58.0 8.8 41 87-127 260-302 (387)
166 COG1073 Hydrolases of the alph 97.7 0.0012 2.6E-08 55.3 13.0 70 204-273 222-296 (299)
167 cd00741 Lipase Lipase. Lipase 97.7 0.0001 2.2E-09 56.1 5.5 52 77-128 7-66 (153)
168 KOG2183 Prolylcarboxypeptidase 97.6 0.00027 5.9E-09 60.8 7.8 108 20-127 76-200 (492)
169 COG0627 Predicted esterase [Ge 97.6 0.00023 4.9E-09 60.5 7.3 103 25-128 55-186 (316)
170 KOG1551 Uncharacterized conser 97.5 0.0023 4.9E-08 52.1 11.1 56 216-273 309-365 (371)
171 cd00312 Esterase_lipase Estera 97.5 0.00051 1.1E-08 62.6 8.4 101 24-129 95-213 (493)
172 PF01764 Lipase_3: Lipase (cla 97.4 0.00033 7.1E-09 52.3 5.7 38 78-115 48-85 (140)
173 PF05705 DUF829: Eukaryotic pr 97.4 0.046 9.9E-07 44.8 18.5 61 211-271 176-240 (240)
174 PF02089 Palm_thioest: Palmito 97.3 0.00055 1.2E-08 56.7 6.1 101 25-128 6-115 (279)
175 PLN02517 phosphatidylcholine-s 97.3 0.00063 1.4E-08 61.6 6.5 82 38-128 156-262 (642)
176 KOG2369 Lecithin:cholesterol a 97.3 0.00037 8E-09 61.1 4.8 84 38-127 124-223 (473)
177 PLN02633 palmitoyl protein thi 97.2 0.0028 6.1E-08 53.1 8.8 97 25-128 26-130 (314)
178 PF11144 DUF2920: Protein of u 97.2 0.0026 5.7E-08 55.2 8.7 34 95-128 185-218 (403)
179 KOG3101 Esterase D [General fu 97.1 0.00044 9.5E-09 54.3 3.4 104 25-128 45-175 (283)
180 KOG2541 Palmitoyl protein thio 97.1 0.0054 1.2E-07 50.0 9.5 95 25-128 24-127 (296)
181 PF06259 Abhydrolase_8: Alpha/ 97.1 0.01 2.2E-07 46.1 10.7 53 77-129 87-144 (177)
182 PF11187 DUF2974: Protein of u 97.1 0.0012 2.5E-08 53.5 5.6 44 84-128 75-122 (224)
183 COG2830 Uncharacterized protei 97.1 0.0057 1.2E-07 46.0 8.5 81 22-129 9-90 (214)
184 PF00450 Peptidase_S10: Serine 97.0 0.0048 1E-07 54.8 9.5 105 23-128 39-180 (415)
185 COG2819 Predicted hydrolase of 97.0 0.0014 3.1E-08 53.6 5.1 53 77-129 117-172 (264)
186 COG2936 Predicted acyl esteras 97.0 0.0025 5.4E-08 57.8 7.0 80 48-130 78-160 (563)
187 KOG4840 Predicted hydrolases o 96.9 0.0023 5E-08 50.7 5.7 95 26-127 38-142 (299)
188 cd00519 Lipase_3 Lipase (class 96.9 0.0021 4.5E-08 52.4 5.4 38 77-114 107-148 (229)
189 PLN02162 triacylglycerol lipas 96.8 0.0032 6.9E-08 55.7 6.4 36 78-113 262-297 (475)
190 COG2382 Fes Enterochelin ester 96.8 0.0023 4.9E-08 53.2 4.7 99 25-129 99-212 (299)
191 PLN00413 triacylglycerol lipas 96.7 0.0048 1E-07 54.7 6.5 35 79-113 269-303 (479)
192 PLN02571 triacylglycerol lipas 96.5 0.0046 9.9E-08 54.2 4.9 37 78-114 208-246 (413)
193 PF10340 DUF2424: Protein of u 96.4 0.032 7E-07 48.4 9.9 104 23-130 121-236 (374)
194 PLN02454 triacylglycerol lipas 96.4 0.0056 1.2E-07 53.6 5.2 32 83-114 215-248 (414)
195 KOG1202 Animal-type fatty acid 96.4 0.14 3E-06 50.4 14.4 99 21-131 2120-2221(2376)
196 KOG4372 Predicted alpha/beta h 96.2 0.0063 1.4E-07 52.6 4.4 85 25-110 81-166 (405)
197 COG4287 PqaA PhoPQ-activated p 96.2 0.019 4E-07 49.1 6.8 61 210-273 326-386 (507)
198 PLN02408 phospholipase A1 96.2 0.0087 1.9E-07 51.7 5.0 34 81-114 185-220 (365)
199 PLN02934 triacylglycerol lipas 96.0 0.012 2.6E-07 52.6 5.0 36 78-113 305-340 (515)
200 PLN02324 triacylglycerol lipas 95.9 0.013 2.8E-07 51.4 4.9 35 80-114 199-235 (415)
201 KOG2182 Hydrolytic enzymes of 95.9 0.053 1.1E-06 48.3 8.7 107 21-127 83-205 (514)
202 PLN02310 triacylglycerol lipas 95.9 0.02 4.4E-07 50.1 6.1 36 79-114 190-229 (405)
203 PF00135 COesterase: Carboxyle 95.9 0.036 7.7E-07 50.9 8.2 105 24-129 125-245 (535)
204 COG2272 PnbA Carboxylesterase 95.8 0.039 8.5E-07 49.1 7.4 113 15-129 80-217 (491)
205 COG2939 Carboxypeptidase C (ca 95.8 0.048 1.1E-06 48.6 7.9 101 24-126 101-233 (498)
206 PF07082 DUF1350: Protein of u 95.7 0.13 2.8E-06 41.9 9.4 96 26-126 19-122 (250)
207 PLN02802 triacylglycerol lipas 95.6 0.019 4.2E-07 51.4 4.9 35 80-114 314-350 (509)
208 PLN02753 triacylglycerol lipas 95.6 0.021 4.5E-07 51.4 4.8 34 80-113 293-331 (531)
209 PLN02719 triacylglycerol lipas 95.3 0.028 6.1E-07 50.4 4.8 35 80-114 279-318 (518)
210 PLN03037 lipase class 3 family 95.3 0.028 6E-07 50.5 4.7 35 80-114 300-338 (525)
211 PLN02761 lipase class 3 family 95.1 0.035 7.5E-07 50.0 4.8 34 80-113 274-313 (527)
212 PLN02209 serine carboxypeptida 95.1 0.13 2.9E-06 46.0 8.4 61 213-274 351-435 (437)
213 COG1770 PtrB Protease II [Amin 94.9 0.42 9E-06 44.3 11.1 53 75-127 506-560 (682)
214 PF05277 DUF726: Protein of un 94.9 0.046 1E-06 47.1 4.8 37 92-128 218-259 (345)
215 COG3946 VirJ Type IV secretory 94.9 0.096 2.1E-06 45.5 6.6 77 27-112 263-344 (456)
216 PF01083 Cutinase: Cutinase; 94.8 0.055 1.2E-06 42.3 4.7 51 77-127 60-120 (179)
217 PLN03016 sinapoylglucose-malat 94.7 0.17 3.8E-06 45.2 8.1 61 213-274 347-431 (433)
218 PLN02847 triacylglycerol lipas 94.6 0.059 1.3E-06 49.2 5.0 22 93-114 250-271 (633)
219 PF06441 EHN: Epoxide hydrolas 94.4 0.035 7.6E-07 39.7 2.5 22 23-44 91-112 (112)
220 PF00450 Peptidase_S10: Serine 94.1 0.057 1.2E-06 47.9 4.0 61 213-273 330-415 (415)
221 PF11288 DUF3089: Protein of u 94.1 0.13 2.9E-06 40.9 5.4 39 77-115 77-116 (207)
222 KOG2237 Predicted serine prote 93.8 0.5 1.1E-05 43.6 9.1 99 28-126 472-581 (712)
223 PF04083 Abhydro_lipase: Parti 93.8 0.054 1.2E-06 34.3 2.2 19 23-41 42-60 (63)
224 KOG4569 Predicted lipase [Lipi 93.4 0.13 2.9E-06 44.4 4.8 37 78-114 155-191 (336)
225 PLN02213 sinapoylglucose-malat 93.3 0.28 6.2E-06 42.1 6.6 60 213-273 233-316 (319)
226 COG4947 Uncharacterized protei 93.0 0.27 5.9E-06 37.7 5.2 111 15-127 17-134 (227)
227 PF05576 Peptidase_S37: PS-10 92.7 0.13 2.7E-06 45.0 3.5 117 9-128 48-168 (448)
228 PLN02213 sinapoylglucose-malat 92.1 0.61 1.3E-05 40.1 7.1 60 51-112 2-69 (319)
229 PLN02209 serine carboxypeptida 91.0 0.8 1.7E-05 41.1 6.8 103 24-128 68-211 (437)
230 PLN03016 sinapoylglucose-malat 90.9 0.85 1.9E-05 40.9 6.9 75 51-127 116-208 (433)
231 KOG3967 Uncharacterized conser 90.9 0.36 7.9E-06 38.3 4.0 101 25-128 102-226 (297)
232 KOG1282 Serine carboxypeptidas 90.8 1.1 2.5E-05 40.1 7.5 61 213-273 363-447 (454)
233 KOG1516 Carboxylesterase and r 90.2 1.4 3.1E-05 40.8 8.0 52 77-128 173-231 (545)
234 KOG1282 Serine carboxypeptidas 90.1 0.9 1.9E-05 40.8 6.3 87 24-112 73-186 (454)
235 COG5153 CVT17 Putative lipase 87.4 0.92 2E-05 37.8 4.1 33 84-116 266-298 (425)
236 KOG4540 Putative lipase essent 87.4 0.92 2E-05 37.8 4.1 33 84-116 266-298 (425)
237 COG1448 TyrB Aspartate/tyrosin 87.2 4 8.7E-05 35.5 8.0 84 26-127 173-263 (396)
238 COG1505 Serine proteases of th 86.5 6.5 0.00014 36.4 9.3 95 29-124 424-530 (648)
239 KOG2029 Uncharacterized conser 85.8 1.1 2.4E-05 41.1 4.1 34 77-110 506-542 (697)
240 PF00698 Acyl_transf_1: Acyl t 84.1 0.87 1.9E-05 39.0 2.7 29 84-112 74-102 (318)
241 smart00827 PKS_AT Acyl transfe 83.6 1.4 3.1E-05 37.1 3.8 30 84-113 72-101 (298)
242 PRK12467 peptide synthase; Pro 82.0 6.3 0.00014 45.6 8.8 98 25-128 3693-3794(3956)
243 TIGR03131 malonate_mdcH malona 81.7 1.9 4.1E-05 36.4 3.8 30 84-113 66-95 (295)
244 COG4553 DepA Poly-beta-hydroxy 81.6 32 0.00069 29.2 17.8 99 25-128 104-208 (415)
245 TIGR00128 fabD malonyl CoA-acy 80.2 2.2 4.7E-05 35.8 3.7 30 84-113 72-102 (290)
246 KOG2385 Uncharacterized conser 78.3 5.1 0.00011 36.3 5.3 39 90-128 443-486 (633)
247 PF06850 PHB_depo_C: PHB de-po 77.5 7 0.00015 30.8 5.3 61 213-273 134-201 (202)
248 PF08237 PE-PPE: PE-PPE domain 77.1 7.1 0.00015 31.7 5.6 39 76-114 28-68 (225)
249 PF07519 Tannase: Tannase and 77.0 4.8 0.0001 36.7 5.0 84 43-127 52-148 (474)
250 PF09949 DUF2183: Uncharacteri 77.0 6.9 0.00015 27.3 4.7 85 37-124 10-97 (100)
251 PRK10279 hypothetical protein; 73.4 3.1 6.8E-05 35.4 2.7 35 84-118 23-57 (300)
252 cd07198 Patatin Patatin-like p 72.9 5.4 0.00012 30.7 3.8 34 83-116 15-48 (172)
253 cd07225 Pat_PNPLA6_PNPLA7 Pata 72.5 5.9 0.00013 33.8 4.2 33 83-115 32-64 (306)
254 cd07207 Pat_ExoU_VipD_like Exo 70.9 6 0.00013 31.0 3.7 32 84-115 17-48 (194)
255 cd01714 ETF_beta The electron 70.7 15 0.00033 29.2 6.0 63 51-125 78-145 (202)
256 TIGR02816 pfaB_fam PfaB family 70.3 5.4 0.00012 36.8 3.7 32 84-115 254-286 (538)
257 PF03610 EIIA-man: PTS system 69.7 37 0.0008 24.1 8.0 69 26-109 2-73 (116)
258 COG1752 RssA Predicted esteras 69.5 6.8 0.00015 33.4 4.0 34 83-116 28-61 (306)
259 cd07210 Pat_hypo_W_succinogene 67.6 9.8 0.00021 30.8 4.3 33 84-116 18-50 (221)
260 cd00006 PTS_IIA_man PTS_IIA, P 67.5 43 0.00093 24.0 7.6 70 26-110 3-74 (122)
261 cd07230 Pat_TGL4-5_like Triacy 66.7 4.6 9.9E-05 36.1 2.5 39 84-122 91-129 (421)
262 KOG1283 Serine carboxypeptidas 65.0 12 0.00027 31.9 4.4 90 23-114 30-142 (414)
263 cd07227 Pat_Fungal_NTE1 Fungal 64.5 10 0.00022 31.7 4.0 31 84-114 28-58 (269)
264 cd07228 Pat_NTE_like_bacteria 64.0 11 0.00024 29.0 3.9 33 85-117 19-51 (175)
265 TIGR03712 acc_sec_asp2 accesso 63.3 1.2E+02 0.0026 27.7 12.4 59 53-115 318-378 (511)
266 cd07229 Pat_TGL3_like Triacylg 62.3 6.6 0.00014 34.7 2.6 40 84-123 101-140 (391)
267 cd07232 Pat_PLPL Patain-like p 62.1 6.2 0.00013 35.1 2.4 40 84-123 85-124 (407)
268 cd07209 Pat_hypo_Ecoli_Z1214_l 61.4 14 0.0003 29.7 4.1 33 84-116 16-48 (215)
269 cd07231 Pat_SDP1-like Sugar-De 59.2 7.7 0.00017 33.2 2.3 38 84-121 86-123 (323)
270 COG1576 Uncharacterized conser 58.4 33 0.00071 26.0 5.3 57 43-112 60-116 (155)
271 COG3887 Predicted signaling pr 58.4 20 0.00044 33.2 4.9 97 26-127 260-376 (655)
272 cd07205 Pat_PNPLA6_PNPLA7_NTE1 55.4 22 0.00048 27.2 4.3 32 84-115 18-49 (175)
273 cd07208 Pat_hypo_Ecoli_yjju_li 54.0 23 0.00049 29.4 4.4 36 84-119 16-52 (266)
274 COG3933 Transcriptional antite 52.6 1.2E+02 0.0027 27.3 8.6 71 26-110 111-181 (470)
275 TIGR02883 spore_cwlD N-acetylm 51.8 24 0.00051 27.7 3.9 40 52-93 1-44 (189)
276 COG2939 Carboxypeptidase C (ca 47.5 18 0.00038 32.9 2.8 60 213-273 425-490 (498)
277 PRK10319 N-acetylmuramoyl-l-al 47.0 34 0.00074 28.9 4.3 43 50-93 55-100 (287)
278 cd07212 Pat_PNPLA9 Patatin-lik 46.6 36 0.00079 29.1 4.5 19 97-115 35-53 (312)
279 COG0331 FabD (acyl-carrier-pro 46.4 23 0.0005 30.3 3.2 22 92-113 83-104 (310)
280 cd07222 Pat_PNPLA4 Patatin-lik 46.2 22 0.00048 29.2 3.1 38 84-122 17-58 (246)
281 PRK09004 FMN-binding protein M 46.1 57 0.0012 24.4 5.0 18 76-93 97-114 (146)
282 cd07206 Pat_TGL3-4-5_SDP1 Tria 44.8 31 0.00068 29.3 3.8 35 84-118 87-121 (298)
283 KOG1387 Glycosyltransferase [C 44.7 8.4 0.00018 33.3 0.4 37 88-128 121-158 (465)
284 PF02590 SPOUT_MTase: Predicte 44.5 35 0.00076 25.9 3.7 54 42-107 59-112 (155)
285 cd07224 Pat_like Patatin-like 42.5 44 0.00096 27.2 4.3 35 83-117 16-52 (233)
286 PF13709 DUF4159: Domain of un 42.3 97 0.0021 24.7 6.1 56 213-270 53-108 (207)
287 COG2230 Cfa Cyclopropane fatty 42.1 66 0.0014 27.2 5.2 47 78-125 55-104 (283)
288 PF07519 Tannase: Tannase and 42.0 43 0.00094 30.6 4.5 65 209-273 349-426 (474)
289 PF14253 AbiH: Bacteriophage a 41.6 28 0.00061 28.8 3.1 22 86-107 226-248 (270)
290 PRK05723 flavodoxin; Provision 41.3 40 0.00087 25.4 3.6 57 32-96 59-120 (151)
291 smart00824 PKS_TE Thioesterase 40.9 14 0.00031 28.5 1.2 59 211-270 151-211 (212)
292 PF10503 Esterase_phd: Esteras 40.9 31 0.00067 27.9 3.0 27 213-239 169-195 (220)
293 PF00862 Sucrose_synth: Sucros 40.1 62 0.0014 29.7 5.0 41 74-114 380-422 (550)
294 COG1073 Hydrolases of the alph 40.0 3.6 7.7E-05 34.0 -2.6 92 24-117 49-155 (299)
295 PRK08105 flavodoxin; Provision 39.2 48 0.001 24.9 3.7 56 32-95 60-118 (149)
296 PLN02752 [acyl-carrier protein 39.2 32 0.00068 29.8 3.1 28 86-113 110-143 (343)
297 PRK10431 N-acetylmuramoyl-l-al 38.0 67 0.0015 29.1 5.0 45 52-98 192-240 (445)
298 TIGR02813 omega_3_PfaA polyket 37.8 33 0.00071 38.3 3.4 29 84-112 664-692 (2582)
299 PF00448 SRP54: SRP54-type pro 37.0 1E+02 0.0022 24.3 5.5 65 49-125 82-148 (196)
300 COG0218 Predicted GTPase [Gene 36.4 51 0.0011 26.2 3.5 13 53-65 72-84 (200)
301 cd07204 Pat_PNPLA_like Patatin 34.9 67 0.0014 26.3 4.2 35 84-118 17-56 (243)
302 cd06143 PAN2_exo DEDDh 3'-5' e 34.8 41 0.00088 26.1 2.7 22 94-117 101-123 (174)
303 KOG1752 Glutaredoxin and relat 34.8 1.6E+02 0.0035 20.6 6.0 79 23-116 13-91 (104)
304 PRK14974 cell division protein 33.5 2.2E+02 0.0048 24.7 7.3 65 49-125 221-287 (336)
305 PF09994 DUF2235: Uncharacteri 33.4 2.9E+02 0.0062 23.1 8.1 38 76-113 72-111 (277)
306 PF03681 UPF0150: Uncharacteri 33.4 77 0.0017 18.3 3.3 32 50-90 13-44 (48)
307 cd07218 Pat_iPLA2 Calcium-inde 32.9 76 0.0016 26.1 4.2 25 96-120 32-57 (245)
308 cd07221 Pat_PNPLA3 Patatin-lik 32.7 78 0.0017 26.2 4.3 28 95-122 33-61 (252)
309 PRK00103 rRNA large subunit me 32.5 1.3E+02 0.0028 22.9 5.1 53 45-109 62-114 (157)
310 TIGR00521 coaBC_dfp phosphopan 31.7 3.5E+02 0.0076 24.1 8.4 93 26-127 114-233 (390)
311 cd01819 Patatin_and_cPLA2 Pata 31.6 86 0.0019 23.6 4.1 29 84-112 16-46 (155)
312 COG4822 CbiK Cobalamin biosynt 31.3 2.3E+02 0.005 22.9 6.3 57 26-99 140-199 (265)
313 PRK13512 coenzyme A disulfide 30.7 78 0.0017 28.4 4.3 46 81-129 136-181 (438)
314 PF03283 PAE: Pectinacetyleste 30.2 1.3E+02 0.0027 26.5 5.3 35 93-127 155-193 (361)
315 KOG1411 Aspartate aminotransfe 29.4 1.2E+02 0.0026 26.5 4.8 84 26-126 199-289 (427)
316 COG3621 Patatin [General funct 28.7 1.6E+02 0.0034 25.6 5.4 58 45-117 3-65 (394)
317 COG2205 KdpD Osmosensitive K+ 28.5 5.8E+02 0.013 25.3 9.5 90 23-124 248-340 (890)
318 PF05577 Peptidase_S28: Serine 28.4 59 0.0013 29.1 3.1 39 214-256 377-415 (434)
319 TIGR03607 patatin-related prot 27.5 79 0.0017 30.7 3.8 23 91-113 63-85 (739)
320 cd07220 Pat_PNPLA2 Patatin-lik 26.8 1.1E+02 0.0023 25.4 4.1 22 95-116 37-58 (249)
321 cd00382 beta_CA Carbonic anhyd 26.8 80 0.0017 22.6 3.0 31 79-109 44-74 (119)
322 PF08133 Nuclease_act: Anticod 26.7 32 0.00069 16.9 0.6 21 1-21 1-21 (26)
323 COG2062 SixA Phosphohistidine 26.3 1.5E+02 0.0032 22.8 4.5 72 25-111 48-121 (163)
324 COG4814 Uncharacterized protei 26.0 2.5E+02 0.0053 23.5 5.8 60 213-273 216-286 (288)
325 cd07211 Pat_PNPLA8 Patatin-lik 25.8 84 0.0018 26.7 3.5 17 97-113 44-60 (308)
326 cd02696 MurNAc-LAA N-acetylmur 25.5 1E+02 0.0022 23.4 3.6 39 54-93 2-43 (172)
327 COG0860 AmiC N-acetylmuramoyl- 24.8 2E+02 0.0044 23.4 5.3 40 51-92 42-85 (231)
328 cd07217 Pat17_PNPLA8_PNPLA9_li 24.8 65 0.0014 28.1 2.6 18 97-114 44-61 (344)
329 TIGR00064 ftsY signal recognit 24.5 4.2E+02 0.0091 22.1 9.1 68 46-125 150-225 (272)
330 PF01734 Patatin: Patatin-like 24.5 90 0.002 23.5 3.2 22 93-114 26-47 (204)
331 cd03818 GT1_ExpC_like This fam 24.2 4.8E+02 0.01 22.7 8.6 35 27-63 2-37 (396)
332 PF12740 Chlorophyllase2: Chlo 24.1 93 0.002 25.9 3.3 50 211-260 152-211 (259)
333 PRK06029 3-octaprenyl-4-hydrox 24.1 3.3E+02 0.0071 21.4 6.2 58 22-95 114-178 (185)
334 PF01520 Amidase_3: N-acetylmu 23.9 65 0.0014 24.5 2.2 38 54-92 1-41 (175)
335 cd03379 beta_CA_cladeD Carboni 23.8 1.1E+02 0.0024 22.7 3.4 30 79-108 41-70 (142)
336 PRK11613 folP dihydropteroate 23.7 4.5E+02 0.0098 22.2 7.4 16 93-108 210-225 (282)
337 PRK06731 flhF flagellar biosyn 23.6 4.4E+02 0.0095 22.1 8.9 72 41-124 143-218 (270)
338 PF12242 Eno-Rase_NADH_b: NAD( 23.6 1.2E+02 0.0026 20.0 3.0 26 91-116 37-62 (78)
339 COG1506 DAP2 Dipeptidyl aminop 23.2 2.5E+02 0.0055 26.7 6.4 56 10-65 537-598 (620)
340 PF12566 DUF3748: Protein of u 22.9 84 0.0018 22.5 2.3 19 26-44 15-33 (122)
341 PRK07877 hypothetical protein; 22.6 1.3E+02 0.0029 29.1 4.4 37 89-127 103-139 (722)
342 PRK03482 phosphoglycerate muta 22.4 2.4E+02 0.0052 22.3 5.4 34 75-110 120-157 (215)
343 TIGR02884 spore_pdaA delta-lac 22.4 95 0.0021 25.0 3.0 32 26-57 188-221 (224)
344 KOG2248 3'-5' exonuclease [Rep 22.2 93 0.002 27.5 3.1 42 82-125 281-323 (380)
345 PF12641 Flavodoxin_3: Flavodo 22.1 2.8E+02 0.006 21.1 5.3 59 213-272 39-97 (160)
346 PF06309 Torsin: Torsin; Inte 22.0 81 0.0018 23.1 2.2 20 22-41 50-69 (127)
347 PF08197 TT_ORF2a: pORF2a trun 21.9 58 0.0013 18.7 1.1 14 50-63 34-47 (49)
348 PRK06193 hypothetical protein; 21.6 1.3E+02 0.0029 24.0 3.6 28 76-103 136-165 (206)
349 TIGR02764 spore_ybaN_pdaB poly 21.5 75 0.0016 24.7 2.2 32 26-57 153-188 (191)
350 TIGR02364 dha_pts dihydroxyace 21.1 3.3E+02 0.0072 19.7 8.4 87 26-126 3-94 (125)
351 PRK14194 bifunctional 5,10-met 21.1 1.7E+02 0.0037 25.0 4.3 34 81-114 143-182 (301)
352 PF14252 DUF4347: Domain of un 20.9 3.4E+02 0.0073 20.8 5.6 77 27-106 25-104 (165)
353 COG0163 UbiX 3-polyprenyl-4-hy 20.9 3.9E+02 0.0084 21.1 5.8 64 22-95 116-180 (191)
354 KOG2214 Predicted esterase of 20.9 53 0.0012 30.0 1.3 48 77-124 185-232 (543)
355 PRK14457 ribosomal RNA large s 20.8 5.7E+02 0.012 22.3 8.7 74 27-109 260-334 (345)
356 PF05576 Peptidase_S37: PS-10 20.7 1E+02 0.0022 27.7 2.9 65 204-271 342-411 (448)
357 PF02882 THF_DHG_CYH_C: Tetrah 20.6 2.1E+02 0.0046 21.8 4.4 38 77-114 16-59 (160)
358 cd07213 Pat17_PNPLA8_PNPLA9_li 20.4 1.9E+02 0.0042 24.2 4.6 19 97-115 37-55 (288)
359 TIGR00246 tRNA_RlmH_YbeA rRNA 20.2 2.6E+02 0.0055 21.2 4.7 54 43-110 59-112 (153)
No 1
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=1.9e-39 Score=274.96 Aligned_cols=256 Identities=20% Similarity=0.277 Sum_probs=172.0
Q ss_pred hhceEEecCCCceEEEEcCCCCChhhhhhhHHHhhcCCEEEEEccCCCCCCCCCCC---CcccccchhHHHHHHHHHHHH
Q 045774 14 ALNVRVVGQGQSIIVFSHGFGSDQSVWSRVIPSFTRAYRVISFDLMCSGSCDPTNY---DFQRYATLDGYVDDLLSFLDA 90 (275)
Q Consensus 14 ~~~~~~~g~g~~~ivllHG~~~~~~~w~~~~~~l~~~~~via~Dl~G~G~S~~~~~---~~~~~~~~~~~a~dl~~~l~~ 90 (275)
+++|+..|+++++|||+||+++++..|..+++.|++.|+|+++|+||||.|+.... +....++++++++|+.+++++
T Consensus 19 ~i~y~~~G~~~~~vlllHG~~~~~~~w~~~~~~L~~~~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~ 98 (294)
T PLN02824 19 NIRYQRAGTSGPALVLVHGFGGNADHWRKNTPVLAKSHRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSD 98 (294)
T ss_pred EEEEEEcCCCCCeEEEECCCCCChhHHHHHHHHHHhCCeEEEEcCCCCCCCCCCccccccccccCCHHHHHHHHHHHHHH
Confidence 46777778533689999999999999999999999999999999999999964211 111235799999999999999
Q ss_pred hCCCceEEEEeChhHHHHHHHHHhCCccccceeeecCCCCCcCCCCCcCCCCcchHHHHHHHHhhh--hhhhh-------
Q 045774 91 LEIDRCAFVGHSVSAMIGLLAAIHRPNLFSRLILIGGSPRFTNDGNYIGGIDPAHMEEVFRRMESN--YESWV------- 161 (275)
Q Consensus 91 l~~~~~~lvGhS~GG~val~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~------- 161 (275)
++.++++||||||||++++.+|.++|++|+++|++++.+........ ..+.......+...+... ...+.
T Consensus 99 l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (294)
T PLN02824 99 VVGDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQ-PWLGRPFIKAFQNLLRETAVGKAFFKSVATPE 177 (294)
T ss_pred hcCCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCccccccccc-chhhhHHHHHHHHHHhchhHHHHHHHhhcCHH
Confidence 99999999999999999999999999999999999875422111100 011111111111111000 00000
Q ss_pred --hhhcccccCC--CCChHHHHHHHHHhhcCChHHHHHHHHHHh---hhchHhhhCCCCCcEEEEEeCCCCCCCHHHHHH
Q 045774 162 --AGFVPMALGA--DVPDMALQEFSRTLFSMRPDIALHVARTAF---AADLRHVLGLVRVPVCIIQSSVDLSVPPAVAEY 234 (275)
Q Consensus 162 --~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~d~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~ 234 (275)
..+....... .......+.+.+. ...+........... ..+..+.++++++|+++|+|++|..+|.+.+++
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~ 255 (294)
T PLN02824 178 TVKNILCQCYHDDSAVTDELVEAILRP--GLEPGAVDVFLDFISYSGGPLPEELLPAVKCPVLIAWGEKDPWEPVELGRA 255 (294)
T ss_pred HHHHHHHHhccChhhccHHHHHHHHhc--cCCchHHHHHHHHhccccccchHHHHhhcCCCeEEEEecCCCCCChHHHHH
Confidence 0000000111 1111111111110 011111111111111 112345688999999999999999999999888
Q ss_pred HHHHcCCCccEEEcCCCCCCCCCCChHHHHHHHHHHHHh
Q 045774 235 MRRHLGGPTVLEFLPTHGHLPHVSSPAPVANAIQQLLRR 273 (275)
Q Consensus 235 ~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 273 (275)
+.+.+++ ++++++++|||++++|+|++|++.|.+|+++
T Consensus 256 ~~~~~~~-~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (294)
T PLN02824 256 YANFDAV-EDFIVLPGVGHCPQDEAPELVNPLIESFVAR 293 (294)
T ss_pred HHhcCCc-cceEEeCCCCCChhhhCHHHHHHHHHHHHhc
Confidence 8887776 5789999999999999999999999999975
No 2
>PRK10349 carboxylesterase BioH; Provisional
Probab=100.00 E-value=4.5e-39 Score=267.29 Aligned_cols=248 Identities=19% Similarity=0.361 Sum_probs=168.7
Q ss_pred hceEEecCCCceEEEEcCCCCChhhhhhhHHHhhcCCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhCCC
Q 045774 15 LNVRVVGQGQSIIVFSHGFGSDQSVWSRVIPSFTRAYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALEID 94 (275)
Q Consensus 15 ~~~~~~g~g~~~ivllHG~~~~~~~w~~~~~~l~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~~ 94 (275)
++|+..|+|+++|||+||+++++..|+.+++.|.++|+|+++|+||||.|+.. .. .+++++++++.+ ++.+
T Consensus 4 ~~y~~~G~g~~~ivllHG~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~----~~-~~~~~~~~~l~~----~~~~ 74 (256)
T PRK10349 4 IWWQTKGQGNVHLVLLHGWGLNAEVWRCIDEELSSHFTLHLVDLPGFGRSRGF----GA-LSLADMAEAVLQ----QAPD 74 (256)
T ss_pred cchhhcCCCCCeEEEECCCCCChhHHHHHHHHHhcCCEEEEecCCCCCCCCCC----CC-CCHHHHHHHHHh----cCCC
Confidence 67888899876799999999999999999999999999999999999999632 12 367777777653 5678
Q ss_pred ceEEEEeChhHHHHHHHHHhCCccccceeeecCCCCCcCCCCCcCCCCcchHHHHHHHHhhhhhhhhhhhccc-ccCCCC
Q 045774 95 RCAFVGHSVSAMIGLLAAIHRPNLFSRLILIGGSPRFTNDGNYIGGIDPAHMEEVFRRMESNYESWVAGFVPM-ALGADV 173 (275)
Q Consensus 95 ~~~lvGhS~GG~val~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 173 (275)
+++||||||||++++.+|.++|++|+++|++++++.......+.. ............+..........+... ......
T Consensus 75 ~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (256)
T PRK10349 75 KAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPG-IKPDVLAGFQQQLSDDFQRTVERFLALQTMGTET 153 (256)
T ss_pred CeEEEEECHHHHHHHHHHHhChHhhheEEEecCccceecCCCCCc-ccHHHHHHHHHHHHhchHHHHHHHHHHHHccCch
Confidence 999999999999999999999999999999988654322111111 111111111111111111111111111 011110
Q ss_pred ChHHHHHHHHHhhcC-ChHH--HHHHHHHHhhhchHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHHcCCCccEEEcCC
Q 045774 174 PDMALQEFSRTLFSM-RPDI--ALHVARTAFAADLRHVLGLVRVPVCIIQSSVDLSVPPAVAEYMRRHLGGPTVLEFLPT 250 (275)
Q Consensus 174 ~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~d~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~ 250 (275)
.......+....... .+.. ...........+..+.++++++|+++|+|++|.++|.+..+.+++.+++ ++++++++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~i~~-~~~~~i~~ 232 (256)
T PRK10349 154 ARQDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPH-SESYIFAK 232 (256)
T ss_pred HHHHHHHHHHHhhccCCCcHHHHHHHHHHHHhCccHHHHhhcCCCeEEEecCCCccCCHHHHHHHHHhCCC-CeEEEeCC
Confidence 011111121111111 1111 1111112233466778889999999999999999999999999999987 68999999
Q ss_pred CCCCCCCCChHHHHHHHHHHHHh
Q 045774 251 HGHLPHVSSPAPVANAIQQLLRR 273 (275)
Q Consensus 251 ~gH~~~~e~p~~~~~~i~~fl~~ 273 (275)
|||++++|+|++|++.|.+|-.+
T Consensus 233 ~gH~~~~e~p~~f~~~l~~~~~~ 255 (256)
T PRK10349 233 AAHAPFISHPAEFCHLLVALKQR 255 (256)
T ss_pred CCCCccccCHHHHHHHHHHHhcc
Confidence 99999999999999999998653
No 3
>PRK03592 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=3.7e-38 Score=267.13 Aligned_cols=250 Identities=20% Similarity=0.327 Sum_probs=168.4
Q ss_pred hhceEEecCCCceEEEEcCCCCChhhhhhhHHHhhcCCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhCC
Q 045774 14 ALNVRVVGQGQSIIVFSHGFGSDQSVWSRVIPSFTRAYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALEI 93 (275)
Q Consensus 14 ~~~~~~~g~g~~~ivllHG~~~~~~~w~~~~~~l~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~ 93 (275)
+++|+..|+| ++|||+||++++...|+.+++.|++.|+|+++|+||||.|+... .. ++++++++|+.+++++++.
T Consensus 18 ~i~y~~~G~g-~~vvllHG~~~~~~~w~~~~~~L~~~~~via~D~~G~G~S~~~~---~~-~~~~~~a~dl~~ll~~l~~ 92 (295)
T PRK03592 18 RMAYIETGEG-DPIVFLHGNPTSSYLWRNIIPHLAGLGRCLAPDLIGMGASDKPD---ID-YTFADHARYLDAWFDALGL 92 (295)
T ss_pred EEEEEEeCCC-CEEEEECCCCCCHHHHHHHHHHHhhCCEEEEEcCCCCCCCCCCC---CC-CCHHHHHHHHHHHHHHhCC
Confidence 3778888987 58999999999999999999999999999999999999997432 12 3799999999999999999
Q ss_pred CceEEEEeChhHHHHHHHHHhCCccccceeeecCCCCCcCCCCCcCCCCcchHHHHHHHHhhhh---------hhhhhhh
Q 045774 94 DRCAFVGHSVSAMIGLLAAIHRPNLFSRLILIGGSPRFTNDGNYIGGIDPAHMEEVFRRMESNY---------ESWVAGF 164 (275)
Q Consensus 94 ~~~~lvGhS~GG~val~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~ 164 (275)
+++++|||||||.+|+.+|.++|++|+++|++++...... + ..+. ......+..+.... ..+...+
T Consensus 93 ~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~---~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (295)
T PRK03592 93 DDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMT---W-DDFP-PAVRELFQALRSPGEGEEMVLEENVFIERV 167 (295)
T ss_pred CCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcc---h-hhcc-hhHHHHHHHHhCcccccccccchhhHHhhc
Confidence 9999999999999999999999999999999997432110 0 0011 01111111111100 0001111
Q ss_pred cccccCCCCChHHHHHHHHHhhcCC-hHHHHHHHHH-----------HhhhchHhhhCCCCCcEEEEEeCCCCCC-CHHH
Q 045774 165 VPMALGADVPDMALQEFSRTLFSMR-PDIALHVART-----------AFAADLRHVLGLVRVPVCIIQSSVDLSV-PPAV 231 (275)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-----------~~~~d~~~~l~~i~~P~l~i~G~~D~~~-~~~~ 231 (275)
..........+...+.+...+.... .......... ....++...+.++++|+++|+|++|.++ +...
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~ 247 (295)
T PRK03592 168 LPGSILRPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVALVEEYAQWLATSDVPKLLINAEPGAILTTGAI 247 (295)
T ss_pred ccCcccccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccCCCCeEEEeccCCcccCcHHH
Confidence 1111111112222222222111000 0000000000 0112344567889999999999999999 5555
Q ss_pred HHHHHHHcCCCccEEEcCCCCCCCCCCChHHHHHHHHHHHHhh
Q 045774 232 AEYMRRHLGGPTVLEFLPTHGHLPHVSSPAPVANAIQQLLRRR 274 (275)
Q Consensus 232 ~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 274 (275)
.+.+.+.+++ ++++++++|||++++|+|+++++.|.+|++++
T Consensus 248 ~~~~~~~~~~-~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~~~ 289 (295)
T PRK03592 248 RDWCRSWPNQ-LEITVFGAGLHFAQEDSPEEIGAAIAAWLRRL 289 (295)
T ss_pred HHHHHHhhhh-cceeeccCcchhhhhcCHHHHHHHHHHHHHHh
Confidence 5555566776 68999999999999999999999999999864
No 4
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=100.00 E-value=1.2e-37 Score=261.57 Aligned_cols=244 Identities=16% Similarity=0.206 Sum_probs=166.7
Q ss_pred hhceEEe--cCCCceEEEEcCCCCChhhhhhhHHHhhcCCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHh
Q 045774 14 ALNVRVV--GQGQSIIVFSHGFGSDQSVWSRVIPSFTRAYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDAL 91 (275)
Q Consensus 14 ~~~~~~~--g~g~~~ivllHG~~~~~~~w~~~~~~l~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l 91 (275)
+++|... |+++++|||+||+++++..|..+++.|++.|+|+++|+||||.|+... . .++++++++++.++++++
T Consensus 13 ~~~~~~~~~~~~~~plvllHG~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~---~-~~~~~~~~~~~~~~i~~l 88 (276)
T TIGR02240 13 SIRTAVRPGKEGLTPLLIFNGIGANLELVFPFIEALDPDLEVIAFDVPGVGGSSTPR---H-PYRFPGLAKLAARMLDYL 88 (276)
T ss_pred EEEEEEecCCCCCCcEEEEeCCCcchHHHHHHHHHhccCceEEEECCCCCCCCCCCC---C-cCcHHHHHHHHHHHHHHh
Confidence 4677654 235568999999999999999999999999999999999999996421 1 247999999999999999
Q ss_pred CCCceEEEEeChhHHHHHHHHHhCCccccceeeecCCCCCcCCCCCcCCCCcchHHHHHHHHhhhhhhhhh-----hhcc
Q 045774 92 EIDRCAFVGHSVSAMIGLLAAIHRPNLFSRLILIGGSPRFTNDGNYIGGIDPAHMEEVFRRMESNYESWVA-----GFVP 166 (275)
Q Consensus 92 ~~~~~~lvGhS~GG~val~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 166 (275)
++++++||||||||++++.+|.++|++|+++|++++++...... .. ....... . ....+.. ....
T Consensus 89 ~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~----~~-~~~~~~~----~-~~~~~~~~~~~~~~~~ 158 (276)
T TIGR02240 89 DYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVP----GK-PKVLMMM----A-SPRRYIQPSHGIHIAP 158 (276)
T ss_pred CcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCC----Cc-hhHHHHh----c-Cchhhhccccccchhh
Confidence 99999999999999999999999999999999998765321000 00 0000000 0 0000000 0000
Q ss_pred cccCCC--CChHHHHHHHHHhhcCCh-HHHHHHHHHHhhhchHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHHcCCCc
Q 045774 167 MALGAD--VPDMALQEFSRTLFSMRP-DIALHVARTAFAADLRHVLGLVRVPVCIIQSSVDLSVPPAVAEYMRRHLGGPT 243 (275)
Q Consensus 167 ~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~d~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~ 243 (275)
...... ........+......... ....... .....+..+.++++++|+++|+|++|.++|++..+++.+.+++ +
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~i~~P~lii~G~~D~~v~~~~~~~l~~~~~~-~ 236 (276)
T TIGR02240 159 DIYGGAFRRDPELAMAHASKVRSGGKLGYYWQLF-AGLGWTSIHWLHKIQQPTLVLAGDDDPIIPLINMRLLAWRIPN-A 236 (276)
T ss_pred hhccceeeccchhhhhhhhhcccCCCchHHHHHH-HHcCCchhhHhhcCCCCEEEEEeCCCCcCCHHHHHHHHHhCCC-C
Confidence 000000 000101111111111000 0000100 1112223455789999999999999999999999999999997 5
Q ss_pred cEEEcCCCCCCCCCCChHHHHHHHHHHHHhh
Q 045774 244 VLEFLPTHGHLPHVSSPAPVANAIQQLLRRR 274 (275)
Q Consensus 244 ~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 274 (275)
++++++ +||++++|+|+++++.|.+|+++.
T Consensus 237 ~~~~i~-~gH~~~~e~p~~~~~~i~~fl~~~ 266 (276)
T TIGR02240 237 ELHIID-DGHLFLITRAEAVAPIIMKFLAEE 266 (276)
T ss_pred EEEEEc-CCCchhhccHHHHHHHHHHHHHHh
Confidence 788887 599999999999999999999863
No 5
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=3.5e-37 Score=267.57 Aligned_cols=253 Identities=18% Similarity=0.272 Sum_probs=166.9
Q ss_pred hhceEEecCC-----CceEEEEcCCCCChhhhhhhHHHhhcCCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHH
Q 045774 14 ALNVRVVGQG-----QSIIVFSHGFGSDQSVWSRVIPSFTRAYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFL 88 (275)
Q Consensus 14 ~~~~~~~g~g-----~~~ivllHG~~~~~~~w~~~~~~l~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l 88 (275)
+++|...|+| .++|||+||++++...|.++++.|+++|+|+++|+||||.|+... ... ++++++++++.+++
T Consensus 73 ~i~Y~~~G~g~~~~~gp~lvllHG~~~~~~~w~~~~~~L~~~~~via~Dl~G~G~S~~~~--~~~-~~~~~~a~~l~~~l 149 (360)
T PLN02679 73 SINYLVKGSPEVTSSGPPVLLVHGFGASIPHWRRNIGVLAKNYTVYAIDLLGFGASDKPP--GFS-YTMETWAELILDFL 149 (360)
T ss_pred eEEEEEecCcccCCCCCeEEEECCCCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCCCC--Ccc-ccHHHHHHHHHHHH
Confidence 6788888875 358999999999999999999999999999999999999996421 112 47999999999999
Q ss_pred HHhCCCceEEEEeChhHHHHHHHHH-hCCccccceeeecCCCCCcCCCCCcCCCCcc---hHHHHHHHH-----------
Q 045774 89 DALEIDRCAFVGHSVSAMIGLLAAI-HRPNLFSRLILIGGSPRFTNDGNYIGGIDPA---HMEEVFRRM----------- 153 (275)
Q Consensus 89 ~~l~~~~~~lvGhS~GG~val~~a~-~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~---~~~~~~~~~----------- 153 (275)
++++.++++||||||||++++.++. .+|++|+++|++++.+...... ....+... .....+..+
T Consensus 150 ~~l~~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (360)
T PLN02679 150 EEVVQKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKA-VVDDWRIKLLLPLLWLIDFLLKQRGIASALF 228 (360)
T ss_pred HHhcCCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCcccccccc-ccchHHHhhhcchHHHHHHHhhchhhHHHHH
Confidence 9999999999999999999998887 4799999999998754221100 00000000 000000000
Q ss_pred hh-hhhhhhhhhcccccCC--CCChHHHHHHHHHhhcCChHHHHHHHHHH---hhhchHhhhCCCCCcEEEEEeCCCCCC
Q 045774 154 ES-NYESWVAGFVPMALGA--DVPDMALQEFSRTLFSMRPDIALHVARTA---FAADLRHVLGLVRVPVCIIQSSVDLSV 227 (275)
Q Consensus 154 ~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~d~~~~l~~i~~P~l~i~G~~D~~~ 227 (275)
.. ........+....... ...+...+.+.+.. . .+.......... ...+....++++++|+|+|+|++|.++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLii~G~~D~~~ 306 (360)
T PLN02679 229 NRVKQRDNLKNILLSVYGNKEAVDDELVEIIRGPA-D-DEGALDAFVSIVTGPPGPNPIKLIPRISLPILVLWGDQDPFT 306 (360)
T ss_pred HHhcCHHHHHHHHHHhccCcccCCHHHHHHHHhhc-c-CCChHHHHHHHHhcCCCCCHHHHhhhcCCCEEEEEeCCCCCc
Confidence 00 0000000000011110 11122122221111 1 111111111111 123445678899999999999999999
Q ss_pred CHHH-----HHHHHHHcCCCccEEEcCCCCCCCCCCChHHHHHHHHHHHHh
Q 045774 228 PPAV-----AEYMRRHLGGPTVLEFLPTHGHLPHVSSPAPVANAIQQLLRR 273 (275)
Q Consensus 228 ~~~~-----~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 273 (275)
|.+. .+.+.+.+++ .+++++++|||++++|+|++|++.|.+||.+
T Consensus 307 p~~~~~~~~~~~l~~~ip~-~~l~~i~~aGH~~~~E~Pe~~~~~I~~FL~~ 356 (360)
T PLN02679 307 PLDGPVGKYFSSLPSQLPN-VTLYVLEGVGHCPHDDRPDLVHEKLLPWLAQ 356 (360)
T ss_pred CchhhHHHHHHhhhccCCc-eEEEEcCCCCCCccccCHHHHHHHHHHHHHh
Confidence 8763 2345566787 5899999999999999999999999999975
No 6
>PRK00870 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=4.9e-37 Score=261.10 Aligned_cols=251 Identities=18% Similarity=0.174 Sum_probs=162.7
Q ss_pred hhceEEecCC-CceEEEEcCCCCChhhhhhhHHHhhc-CCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHh
Q 045774 14 ALNVRVVGQG-QSIIVFSHGFGSDQSVWSRVIPSFTR-AYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDAL 91 (275)
Q Consensus 14 ~~~~~~~g~g-~~~ivllHG~~~~~~~w~~~~~~l~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l 91 (275)
+++|...|.+ .++|||+||+++++..|+.+++.|++ +|+|+++|+||||.|++.. .... ++++++++|+.++++++
T Consensus 35 ~i~y~~~G~~~~~~lvliHG~~~~~~~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~-~~~~-~~~~~~a~~l~~~l~~l 112 (302)
T PRK00870 35 RMHYVDEGPADGPPVLLLHGEPSWSYLYRKMIPILAAAGHRVIAPDLIGFGRSDKPT-RRED-YTYARHVEWMRSWFEQL 112 (302)
T ss_pred EEEEEecCCCCCCEEEEECCCCCchhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCC-Cccc-CCHHHHHHHHHHHHHHc
Confidence 4778887752 36899999999999999999999975 6999999999999996421 1122 36999999999999999
Q ss_pred CCCceEEEEeChhHHHHHHHHHhCCccccceeeecCCCCCcCCCCCcCCCCcchHHHHHHHHhhhhhhhhhhhcccccCC
Q 045774 92 EIDRCAFVGHSVSAMIGLLAAIHRPNLFSRLILIGGSPRFTNDGNYIGGIDPAHMEEVFRRMESNYESWVAGFVPMALGA 171 (275)
Q Consensus 92 ~~~~~~lvGhS~GG~val~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (275)
+.++++||||||||++|+.+|.++|++|+++|++++........ ......................+.......
T Consensus 113 ~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (302)
T PRK00870 113 DLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGP------MPDAFWAWRAFSQYSPVLPVGRLVNGGTVR 186 (302)
T ss_pred CCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCcccc------chHHHhhhhcccccCchhhHHHHhhccccc
Confidence 99999999999999999999999999999999998632110000 000000000000000000000000000000
Q ss_pred CCChHHHHHHHHHhhc----CChHHHHHHH-------HHHhhhchHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHHcC
Q 045774 172 DVPDMALQEFSRTLFS----MRPDIALHVA-------RTAFAADLRHVLGLVRVPVCIIQSSVDLSVPPAVAEYMRRHLG 240 (275)
Q Consensus 172 ~~~~~~~~~~~~~~~~----~~~~~~~~~~-------~~~~~~d~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~ 240 (275)
.......+.+...... .......... ......+....+.++++|+++|+|++|.++|... +++++.++
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~-~~~~~~~~ 265 (302)
T PRK00870 187 DLSDAVRAAYDAPFPDESYKAGARAFPLLVPTSPDDPAVAANRAAWAVLERWDKPFLTAFSDSDPITGGGD-AILQKRIP 265 (302)
T ss_pred cCCHHHHHHhhcccCChhhhcchhhhhhcCCCCCCCcchHHHHHHHHhhhcCCCceEEEecCCCCcccCch-HHHHhhcc
Confidence 0111111111100000 0000000000 0000112234578899999999999999999866 78888888
Q ss_pred CCc--cEEEcCCCCCCCCCCChHHHHHHHHHHHHh
Q 045774 241 GPT--VLEFLPTHGHLPHVSSPAPVANAIQQLLRR 273 (275)
Q Consensus 241 ~~~--~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 273 (275)
+.. .+++++++||++++|+|++|++.|.+|+++
T Consensus 266 ~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~ 300 (302)
T PRK00870 266 GAAGQPHPTIKGAGHFLQEDSGEELAEAVLEFIRA 300 (302)
T ss_pred cccccceeeecCCCccchhhChHHHHHHHHHHHhc
Confidence 631 277899999999999999999999999975
No 7
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=100.00 E-value=1.7e-36 Score=248.20 Aligned_cols=241 Identities=20% Similarity=0.343 Sum_probs=163.6
Q ss_pred cCCCceEEEEcCCCCChhhhhhhHHHhhcCCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhCCCceEEEE
Q 045774 21 GQGQSIIVFSHGFGSDQSVWSRVIPSFTRAYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALEIDRCAFVG 100 (275)
Q Consensus 21 g~g~~~ivllHG~~~~~~~w~~~~~~l~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvG 100 (275)
|+|+++|||+||+++++..|..+++.|.++|+|+++|+||||.|+.. . ..+++++++++.+.+ .+++++||
T Consensus 1 g~g~~~iv~~HG~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~----~-~~~~~~~~~~~~~~~----~~~~~lvG 71 (245)
T TIGR01738 1 GQGNVHLVLIHGWGMNAEVFRCLDEELSAHFTLHLVDLPGHGRSRGF----G-PLSLADAAEAIAAQA----PDPAIWLG 71 (245)
T ss_pred CCCCceEEEEcCCCCchhhHHHHHHhhccCeEEEEecCCcCccCCCC----C-CcCHHHHHHHHHHhC----CCCeEEEE
Confidence 56767899999999999999999999998999999999999998642 1 236888888877654 37899999
Q ss_pred eChhHHHHHHHHHhCCccccceeeecCCCCCcCCCCCcCCCCcchHHHHHHHHhhhhhhhhhhhccc-ccCCCCChHHHH
Q 045774 101 HSVSAMIGLLAAIHRPNLFSRLILIGGSPRFTNDGNYIGGIDPAHMEEVFRRMESNYESWVAGFVPM-ALGADVPDMALQ 179 (275)
Q Consensus 101 hS~GG~val~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 179 (275)
|||||.+++.+|.++|++++++|++++.+.+.....+...+.......+...+..........+... ............
T Consensus 72 ~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (245)
T TIGR01738 72 WSLGGLVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFLALQTLGTPTARQDAR 151 (245)
T ss_pred EcHHHHHHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCccchHHH
Confidence 9999999999999999999999999887654322222212211111111111111111111111110 011111111112
Q ss_pred HHHHHhhcC-Ch--HHHHHHHHHHhhhchHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHHcCCCccEEEcCCCCCCCC
Q 045774 180 EFSRTLFSM-RP--DIALHVARTAFAADLRHVLGLVRVPVCIIQSSVDLSVPPAVAEYMRRHLGGPTVLEFLPTHGHLPH 256 (275)
Q Consensus 180 ~~~~~~~~~-~~--~~~~~~~~~~~~~d~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~ 256 (275)
.+.+.+... .+ .............+....+.++++|+++|+|++|..+|.+..+.+.+.+++ .++++++++||+++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~ 230 (245)
T TIGR01738 152 ALKQTLLARPTPNVQVLQAGLEILATVDLRQPLQNISVPFLRLYGYLDGLVPAKVVPYLDKLAPH-SELYIFAKAAHAPF 230 (245)
T ss_pred HHHHHhhccCCCCHHHHHHHHHHhhcccHHHHHhcCCCCEEEEeecCCcccCHHHHHHHHHhCCC-CeEEEeCCCCCCcc
Confidence 222211111 11 111122222234456677889999999999999999999998989999987 68899999999999
Q ss_pred CCChHHHHHHHHHHH
Q 045774 257 VSSPAPVANAIQQLL 271 (275)
Q Consensus 257 ~e~p~~~~~~i~~fl 271 (275)
+|+|+++++.|.+|+
T Consensus 231 ~e~p~~~~~~i~~fi 245 (245)
T TIGR01738 231 LSHAEAFCALLVAFK 245 (245)
T ss_pred ccCHHHHHHHHHhhC
Confidence 999999999999985
No 8
>PLN02965 Probable pheophorbidase
Probab=100.00 E-value=1.1e-36 Score=252.79 Aligned_cols=234 Identities=18% Similarity=0.198 Sum_probs=155.8
Q ss_pred eEEEEcCCCCChhhhhhhHHHh-hcCCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhCC-CceEEEEeCh
Q 045774 26 IIVFSHGFGSDQSVWSRVIPSF-TRAYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALEI-DRCAFVGHSV 103 (275)
Q Consensus 26 ~ivllHG~~~~~~~w~~~~~~l-~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~-~~~~lvGhS~ 103 (275)
.|||+||++.+...|+.+++.| +.+|+|+++|+||||.|+... ...++++++++|+.+++++++. ++++||||||
T Consensus 5 ~vvllHG~~~~~~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~---~~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhSm 81 (255)
T PLN02965 5 HFVFVHGASHGAWCWYKLATLLDAAGFKSTCVDLTGAGISLTDS---NTVSSSDQYNRPLFALLSDLPPDHKVILVGHSI 81 (255)
T ss_pred EEEEECCCCCCcCcHHHHHHHHhhCCceEEEecCCcCCCCCCCc---cccCCHHHHHHHHHHHHHhcCCCCCEEEEecCc
Confidence 5999999999999999999999 557999999999999996321 1134799999999999999987 4999999999
Q ss_pred hHHHHHHHHHhCCccccceeeecCCCCCcCCCCCcCCCCcchHHHHHHHHhhhhhhhhhhhcccccCCCCCh-HHHHHHH
Q 045774 104 SAMIGLLAAIHRPNLFSRLILIGGSPRFTNDGNYIGGIDPAHMEEVFRRMESNYESWVAGFVPMALGADVPD-MALQEFS 182 (275)
Q Consensus 104 GG~val~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 182 (275)
||++++.+|.++|++|+++|++++.+... .. ......... .......+...+.. ........ .....+.
T Consensus 82 GG~ia~~~a~~~p~~v~~lvl~~~~~~~~-~~-----~~~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 151 (255)
T PLN02965 82 GGGSVTEALCKFTDKISMAIYVAAAMVKP-GS-----IISPRLKNV---MEGTEKIWDYTFGE-GPDKPPTGIMMKPEFV 151 (255)
T ss_pred chHHHHHHHHhCchheeEEEEEccccCCC-CC-----CccHHHHhh---hhccccceeeeecc-CCCCCcchhhcCHHHH
Confidence 99999999999999999999998753110 00 000000000 00000000000000 00000000 0000011
Q ss_pred -HHhhcCC-hHHHHHHHHHH---------hhhchHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHHcCCCccEEEcCCC
Q 045774 183 -RTLFSMR-PDIALHVARTA---------FAADLRHVLGLVRVPVCIIQSSVDLSVPPAVAEYMRRHLGGPTVLEFLPTH 251 (275)
Q Consensus 183 -~~~~~~~-~~~~~~~~~~~---------~~~d~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~ 251 (275)
..+.... .+........+ ...+....+..+++|+++|+|++|..+|++.++.+++.+++ ++++++++|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~~~-a~~~~i~~~ 230 (255)
T PLN02965 152 RHYYYNQSPLEDYTLSSKLLRPAPVRAFQDLDKLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVMVENWPP-AQTYVLEDS 230 (255)
T ss_pred HHHHhcCCCHHHHHHHHHhcCCCCCcchhhhhhccchhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhCCc-ceEEEecCC
Confidence 0111100 00000000000 00112234557999999999999999999999999999998 578889999
Q ss_pred CCCCCCCChHHHHHHHHHHHHh
Q 045774 252 GHLPHVSSPAPVANAIQQLLRR 273 (275)
Q Consensus 252 gH~~~~e~p~~~~~~i~~fl~~ 273 (275)
||++++|+|++|++.|.+|++.
T Consensus 231 GH~~~~e~p~~v~~~l~~~~~~ 252 (255)
T PLN02965 231 DHSAFFSVPTTLFQYLLQAVSS 252 (255)
T ss_pred CCchhhcCHHHHHHHHHHHHHH
Confidence 9999999999999999999875
No 9
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=100.00 E-value=8.3e-36 Score=250.89 Aligned_cols=249 Identities=19% Similarity=0.275 Sum_probs=163.6
Q ss_pred hhceEEecCCCceEEEEcCCCCChhhhhhh---HHHh-hcCCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHH
Q 045774 14 ALNVRVVGQGQSIIVFSHGFGSDQSVWSRV---IPSF-TRAYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLD 89 (275)
Q Consensus 14 ~~~~~~~g~g~~~ivllHG~~~~~~~w~~~---~~~l-~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~ 89 (275)
+++|+..|++ ++||||||++.+...|... +..+ +++|+|+++|+||||.|+....+ ...++ .+++++.++++
T Consensus 21 ~~~y~~~g~~-~~ivllHG~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~--~~~~~-~~~~~l~~~l~ 96 (282)
T TIGR03343 21 RIHYNEAGNG-EAVIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMD--EQRGL-VNARAVKGLMD 96 (282)
T ss_pred eEEEEecCCC-CeEEEECCCCCchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCc--ccccc-hhHHHHHHHHH
Confidence 5888888877 5799999999998888643 3444 45799999999999999743111 11122 57899999999
Q ss_pred HhCCCceEEEEeChhHHHHHHHHHhCCccccceeeecCCCCCcCCCCCcCCCCcchHHHHHHHHhhh-hhhhhhhhccc-
Q 045774 90 ALEIDRCAFVGHSVSAMIGLLAAIHRPNLFSRLILIGGSPRFTNDGNYIGGIDPAHMEEVFRRMESN-YESWVAGFVPM- 167 (275)
Q Consensus 90 ~l~~~~~~lvGhS~GG~val~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~- 167 (275)
.++.++++++||||||++++.+|.++|++|+++|++++...... .............+..+... ...+ ..+...
T Consensus 97 ~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 172 (282)
T TIGR03343 97 ALDIEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPS---LFAPMPMEGIKLLFKLYAEPSYETL-KQMLNVF 172 (282)
T ss_pred HcCCCCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCcc---ccccCchHHHHHHHHHhcCCCHHHH-HHHHhhC
Confidence 99999999999999999999999999999999999986532100 00000101111111111000 0000 000000
Q ss_pred ccCC-CCChHHHHHHHHHhhcCChHHHHHHHHH-----HhhhchHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHHcCC
Q 045774 168 ALGA-DVPDMALQEFSRTLFSMRPDIALHVART-----AFAADLRHVLGLVRVPVCIIQSSVDLSVPPAVAEYMRRHLGG 241 (275)
Q Consensus 168 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~d~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~ 241 (275)
.... ..+....+........ .+......... ....+....++++++|+++|+|++|..+|++..+.+++.+++
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlli~G~~D~~v~~~~~~~~~~~~~~ 251 (282)
T TIGR03343 173 LFDQSLITEELLQGRWENIQR-QPEHLKNFLISSQKAPLSTWDVTARLGEIKAKTLVTWGRDDRFVPLDHGLKLLWNMPD 251 (282)
T ss_pred ccCcccCcHHHHHhHHHHhhc-CHHHHHHHHHhccccccccchHHHHHhhCCCCEEEEEccCCCcCCchhHHHHHHhCCC
Confidence 0111 1111111111111111 11111111110 112234556889999999999999999999999999999997
Q ss_pred CccEEEcCCCCCCCCCCChHHHHHHHHHHHH
Q 045774 242 PTVLEFLPTHGHLPHVSSPAPVANAIQQLLR 272 (275)
Q Consensus 242 ~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 272 (275)
++++++++|||++++|+|++|++.|.+|+.
T Consensus 252 -~~~~~i~~agH~~~~e~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 252 -AQLHVFSRCGHWAQWEHADAFNRLVIDFLR 281 (282)
T ss_pred -CEEEEeCCCCcCCcccCHHHHHHHHHHHhh
Confidence 688999999999999999999999999986
No 10
>PLN02578 hydrolase
Probab=100.00 E-value=1.4e-35 Score=257.28 Aligned_cols=250 Identities=22% Similarity=0.380 Sum_probs=168.8
Q ss_pred hhceEEecCCCceEEEEcCCCCChhhhhhhHHHhhcCCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhCC
Q 045774 14 ALNVRVVGQGQSIIVFSHGFGSDQSVWSRVIPSFTRAYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALEI 93 (275)
Q Consensus 14 ~~~~~~~g~g~~~ivllHG~~~~~~~w~~~~~~l~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~ 93 (275)
+++|...|+| ++|||+||+++++..|..+++.|+++|+|+++|+||||.|+.. ...| +++.+++++.+++++++.
T Consensus 77 ~i~Y~~~g~g-~~vvliHG~~~~~~~w~~~~~~l~~~~~v~~~D~~G~G~S~~~---~~~~-~~~~~a~~l~~~i~~~~~ 151 (354)
T PLN02578 77 KIHYVVQGEG-LPIVLIHGFGASAFHWRYNIPELAKKYKVYALDLLGFGWSDKA---LIEY-DAMVWRDQVADFVKEVVK 151 (354)
T ss_pred EEEEEEcCCC-CeEEEECCCCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCCc---cccc-CHHHHHHHHHHHHHHhcc
Confidence 4778888887 4799999999999999999999999999999999999999753 1233 689999999999999999
Q ss_pred CceEEEEeChhHHHHHHHHHhCCccccceeeecCCCCCcCCCCCcCCC---CcchHHH-HHHHHhhhhhhh---------
Q 045774 94 DRCAFVGHSVSAMIGLLAAIHRPNLFSRLILIGGSPRFTNDGNYIGGI---DPAHMEE-VFRRMESNYESW--------- 160 (275)
Q Consensus 94 ~~~~lvGhS~GG~val~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~--------- 160 (275)
+++++|||||||++++.+|.++|++|+++|++++++.+.......... ......+ ....+......+
T Consensus 152 ~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (354)
T PLN02578 152 EPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKPLKEWFQRVVLGFLFWQA 231 (354)
T ss_pred CCeEEEEECHHHHHHHHHHHhChHhcceEEEECCCccccccccccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999998765432111000000 0000000 000000000000
Q ss_pred -----hhhhcccccCC-C-CChHHHHHHHHHhhcCChHHHH---HHHHH-H---hhhchHhhhCCCCCcEEEEEeCCCCC
Q 045774 161 -----VAGFVPMALGA-D-VPDMALQEFSRTLFSMRPDIAL---HVART-A---FAADLRHVLGLVRVPVCIIQSSVDLS 226 (275)
Q Consensus 161 -----~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~---~~~d~~~~l~~i~~P~l~i~G~~D~~ 226 (275)
........+.. . .++...+.+... ...+.... ..... + ...+..+.++++++|+++|+|++|..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~ 309 (354)
T PLN02578 232 KQPSRIESVLKSVYKDKSNVDDYLVESITEP--AADPNAGEVYYRLMSRFLFNQSRYTLDSLLSKLSCPLLLLWGDLDPW 309 (354)
T ss_pred cCHHHHHHHHHHhcCCcccCCHHHHHHHHhc--ccCCchHHHHHHHHHHHhcCCCCCCHHHHhhcCCCCEEEEEeCCCCC
Confidence 00000000000 0 011111111110 01111111 11111 1 11234567889999999999999999
Q ss_pred CCHHHHHHHHHHcCCCccEEEcCCCCCCCCCCChHHHHHHHHHHHH
Q 045774 227 VPPAVAEYMRRHLGGPTVLEFLPTHGHLPHVSSPAPVANAIQQLLR 272 (275)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 272 (275)
+|.+..+.+.+.+++ ++++++ ++||+++.|+|+++++.|.+|++
T Consensus 310 v~~~~~~~l~~~~p~-a~l~~i-~~GH~~~~e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 310 VGPAKAEKIKAFYPD-TTLVNL-QAGHCPHDEVPEQVNKALLEWLS 353 (354)
T ss_pred CCHHHHHHHHHhCCC-CEEEEe-CCCCCccccCHHHHHHHHHHHHh
Confidence 999999999999987 578878 69999999999999999999986
No 11
>PRK06489 hypothetical protein; Provisional
Probab=100.00 E-value=8.9e-36 Score=259.08 Aligned_cols=251 Identities=16% Similarity=0.222 Sum_probs=161.4
Q ss_pred hhceEEecCC--------CceEEEEcCCCCChhhhh--hhHHHh--------hcCCEEEEEccCCCCCCCCCCCC----c
Q 045774 14 ALNVRVVGQG--------QSIIVFSHGFGSDQSVWS--RVIPSF--------TRAYRVISFDLMCSGSCDPTNYD----F 71 (275)
Q Consensus 14 ~~~~~~~g~g--------~~~ivllHG~~~~~~~w~--~~~~~l--------~~~~~via~Dl~G~G~S~~~~~~----~ 71 (275)
+++|+..|++ .|+|||+||++++...|. .+.+.| +++|+||++|+||||.|+..... .
T Consensus 51 ~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~~~~~~ 130 (360)
T PRK06489 51 RLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDGLRAAF 130 (360)
T ss_pred eEEEEecCCCCcccccCCCCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcCCCCCC
Confidence 4788888874 368999999999988876 444443 67899999999999999632110 0
Q ss_pred ccccchhHHHHHHHHHH-HHhCCCceE-EEEeChhHHHHHHHHHhCCccccceeeecCCCCCcCCCCCcCCCCcchHHHH
Q 045774 72 QRYATLDGYVDDLLSFL-DALEIDRCA-FVGHSVSAMIGLLAAIHRPNLFSRLILIGGSPRFTNDGNYIGGIDPAHMEEV 149 (275)
Q Consensus 72 ~~~~~~~~~a~dl~~~l-~~l~~~~~~-lvGhS~GG~val~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~ 149 (275)
.. ++++++++++.+++ +++++++++ ||||||||++|+.+|.++|++|+++|++++.+........ ......
T Consensus 131 ~~-~~~~~~a~~~~~~l~~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~~~~~~~~~------~~~~~~ 203 (360)
T PRK06489 131 PR-YDYDDMVEAQYRLVTEGLGVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQPTEMSGRNW------MWRRML 203 (360)
T ss_pred Cc-ccHHHHHHHHHHHHHHhcCCCceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCcccccHHHH------HHHHHH
Confidence 12 47999999998855 889999985 8999999999999999999999999999875421100000 000000
Q ss_pred HHHHhhhh--------------hhhhhhh---c-c--ccc-CCCCChHHHHHHHHH----hhcCChHHHHHHHHHHhhhc
Q 045774 150 FRRMESNY--------------ESWVAGF---V-P--MAL-GADVPDMALQEFSRT----LFSMRPDIALHVARTAFAAD 204 (275)
Q Consensus 150 ~~~~~~~~--------------~~~~~~~---~-~--~~~-~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~d 204 (275)
...+.... ..+...+ . . ... ...........+.+. .....+.............+
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 283 (360)
T PRK06489 204 IESIRNDPAWNNGNYTTQPPSLKRANPMFAIATSGGTLAYQAQAPTRAAADKLVDERLAAPVTADANDFLYQWDSSRDYN 283 (360)
T ss_pred HHHHHhCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHhcCChHHHHHHHHHHHHhhhhcCHHHHHHHHHHhhccC
Confidence 00000000 0000000 0 0 000 000000001111111 11111111111111222345
Q ss_pred hHhhhCCCCCcEEEEEeCCCCCCCHHHH--HHHHHHcCCCccEEEcCCC----CCCCCCCChHHHHHHHHHHHHh
Q 045774 205 LRHVLGLVRVPVCIIQSSVDLSVPPAVA--EYMRRHLGGPTVLEFLPTH----GHLPHVSSPAPVANAIQQLLRR 273 (275)
Q Consensus 205 ~~~~l~~i~~P~l~i~G~~D~~~~~~~~--~~~~~~~~~~~~~~~i~~~----gH~~~~e~p~~~~~~i~~fl~~ 273 (275)
..+.+++|++|+|+|+|++|.++|++.. +.+++.+|+ ++++++++| ||+++ |+|++|++.|.+||+.
T Consensus 284 ~~~~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip~-a~l~~i~~a~~~~GH~~~-e~P~~~~~~i~~FL~~ 356 (360)
T PRK06489 284 PSPDLEKIKAPVLAINSADDERNPPETGVMEAALKRVKH-GRLVLIPASPETRGHGTT-GSAKFWKAYLAEFLAQ 356 (360)
T ss_pred hHHHHHhCCCCEEEEecCCCcccChhhHHHHHHHHhCcC-CeEEEECCCCCCCCcccc-cCHHHHHHHHHHHHHh
Confidence 6778899999999999999999998865 788999998 589999986 99997 8999999999999975
No 12
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=100.00 E-value=9.1e-36 Score=244.16 Aligned_cols=257 Identities=20% Similarity=0.284 Sum_probs=170.4
Q ss_pred hceEEecC-CCceEEEEcCCCCChhhhhhhHHHhhcC-CEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhC
Q 045774 15 LNVRVVGQ-GQSIIVFSHGFGSDQSVWSRVIPSFTRA-YRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALE 92 (275)
Q Consensus 15 ~~~~~~g~-g~~~ivllHG~~~~~~~w~~~~~~l~~~-~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~ 92 (275)
+||...|. ++|.|+|+||++.+..+|+.++..|+.. |||+|+|+||+|.|+... .... +|+..++.|+..++++|+
T Consensus 34 ~h~~e~g~~~gP~illlHGfPe~wyswr~q~~~la~~~~rviA~DlrGyG~Sd~P~-~~~~-Yt~~~l~~di~~lld~Lg 111 (322)
T KOG4178|consen 34 LHYVEGGPGDGPIVLLLHGFPESWYSWRHQIPGLASRGYRVIAPDLRGYGFSDAPP-HISE-YTIDELVGDIVALLDHLG 111 (322)
T ss_pred EEEEeecCCCCCEEEEEccCCccchhhhhhhhhhhhcceEEEecCCCCCCCCCCCC-Ccce-eeHHHHHHHHHHHHHHhc
Confidence 55555564 3478999999999999999999999986 999999999999997432 2234 479999999999999999
Q ss_pred CCceEEEEeChhHHHHHHHHHhCCccccceeeecCCCCC-----cC------CCCC-cCCCCcc-hHHHHHHHHh--hhh
Q 045774 93 IDRCAFVGHSVSAMIGLLAAIHRPNLFSRLILIGGSPRF-----TN------DGNY-IGGIDPA-HMEEVFRRME--SNY 157 (275)
Q Consensus 93 ~~~~~lvGhS~GG~val~~a~~~p~~v~~lvli~~~~~~-----~~------~~~~-~~~~~~~-~~~~~~~~~~--~~~ 157 (275)
.+++++|||+||++||+.+|..+|+||+++|.++..... .. ...+ .-.++.. ..+..+.... ...
T Consensus 112 ~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~~p~~~~~~~~~~~f~~~~y~~~fQ~~~~~E~~~s~~~~~~~~ 191 (322)
T KOG4178|consen 112 LKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFPNPKLKPLDSSKAIFGKSYYICLFQEPGKPETELSKDDTEMLV 191 (322)
T ss_pred cceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCCCcccchhhhhccccCccceeEeccccCcchhhhccchhHHhH
Confidence 999999999999999999999999999999999864320 00 0000 0001100 1111111100 000
Q ss_pred hhhhhhhcc--cccC----CC---CChHHHHHHHHHhhcCChHHHHHHHHHHhhhc--hHhhhCCCCCcEEEEEeCCCCC
Q 045774 158 ESWVAGFVP--MALG----AD---VPDMALQEFSRTLFSMRPDIALHVARTAFAAD--LRHVLGLVRVPVCIIQSSVDLS 226 (275)
Q Consensus 158 ~~~~~~~~~--~~~~----~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d--~~~~l~~i~~P~l~i~G~~D~~ 226 (275)
..+..+..+ .... .. ..++.++.+...+....-.-..+..+.+.+.- ....+..+++|+++|+|++|.+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~~~g~~gplNyyrn~~r~w~a~~~~~~~i~iPv~fi~G~~D~v 271 (322)
T KOG4178|consen 192 KTFRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQIDGFTGPLNYYRNFRRNWEAAPWALAKITIPVLFIWGDLDPV 271 (322)
T ss_pred HhhhccccCCccccCCCCCCccchhhHHHHHHHHhccccccccccchhhHHHhhCchhccccccccccceEEEEecCccc
Confidence 000000000 0001 00 11223333333332111111123333333221 2334668999999999999998
Q ss_pred CCHH-HHHHHHHHcCCCccEEEcCCCCCCCCCCChHHHHHHHHHHHHh
Q 045774 227 VPPA-VAEYMRRHLGGPTVLEFLPTHGHLPHVSSPAPVANAIQQLLRR 273 (275)
Q Consensus 227 ~~~~-~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 273 (275)
.+.. ..+.+++.++...+.++++++||+++.|+|++++++|.+|++.
T Consensus 272 ~~~p~~~~~~rk~vp~l~~~vv~~~~gH~vqqe~p~~v~~~i~~f~~~ 319 (322)
T KOG4178|consen 272 LPYPIFGELYRKDVPRLTERVVIEGIGHFVQQEKPQEVNQAILGFINS 319 (322)
T ss_pred ccchhHHHHHHHhhccccceEEecCCcccccccCHHHHHHHHHHHHHh
Confidence 8776 4566777888755678899999999999999999999999975
No 13
>PRK03204 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=4.9e-36 Score=252.86 Aligned_cols=246 Identities=17% Similarity=0.247 Sum_probs=160.4
Q ss_pred hhceEEecCCCceEEEEcCCCCChhhhhhhHHHhhcCCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhCC
Q 045774 14 ALNVRVVGQGQSIIVFSHGFGSDQSVWSRVIPSFTRAYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALEI 93 (275)
Q Consensus 14 ~~~~~~~g~g~~~ivllHG~~~~~~~w~~~~~~l~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~ 93 (275)
+++|...|+| ++|||+||++.++..|+.+++.|.++|+|+++|+||||.|+... + .. ++++++++++.+++++++.
T Consensus 25 ~i~y~~~G~~-~~iv~lHG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~-~-~~-~~~~~~~~~~~~~~~~~~~ 100 (286)
T PRK03204 25 RIHYIDEGTG-PPILLCHGNPTWSFLYRDIIVALRDRFRCVAPDYLGFGLSERPS-G-FG-YQIDEHARVIGEFVDHLGL 100 (286)
T ss_pred EEEEEECCCC-CEEEEECCCCccHHHHHHHHHHHhCCcEEEEECCCCCCCCCCCC-c-cc-cCHHHHHHHHHHHHHHhCC
Confidence 4678888877 58999999999999999999999999999999999999996421 1 12 3689999999999999999
Q ss_pred CceEEEEeChhHHHHHHHHHhCCccccceeeecCCCCCcCCCCCcCCCCcchHHHHHHH--Hhh---hhhhhhhhhcccc
Q 045774 94 DRCAFVGHSVSAMIGLLAAIHRPNLFSRLILIGGSPRFTNDGNYIGGIDPAHMEEVFRR--MES---NYESWVAGFVPMA 168 (275)
Q Consensus 94 ~~~~lvGhS~GG~val~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---~~~~~~~~~~~~~ 168 (275)
+++++|||||||++++.++..+|++|+++|++++.. +... ............. ... ....+...+.+..
T Consensus 101 ~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~-~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (286)
T PRK03204 101 DRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWF-WPAD-----TLAMKAFSRVMSSPPVQYAILRRNFFVERLIPAG 174 (286)
T ss_pred CCEEEEEECccHHHHHHHHHhChhheeEEEEECccc-cCCC-----chhHHHHHHHhccccchhhhhhhhHHHHHhcccc
Confidence 999999999999999999999999999999886532 1100 0000000000000 000 0000011111111
Q ss_pred cCCCCChHHHHHHHHHhhcCChHHHHHHHH--HHh---h---hchHhhhC--CCCCcEEEEEeCCCCCCCH-HHHHHHHH
Q 045774 169 LGADVPDMALQEFSRTLFSMRPDIALHVAR--TAF---A---ADLRHVLG--LVRVPVCIIQSSVDLSVPP-AVAEYMRR 237 (275)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---~---~d~~~~l~--~i~~P~l~i~G~~D~~~~~-~~~~~~~~ 237 (275)
.....++...+.+.. .. ..+........ ... . .+....+. .+++|+++|+|++|.++++ ...+.+++
T Consensus 175 ~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PtliI~G~~D~~~~~~~~~~~~~~ 252 (286)
T PRK03204 175 TEHRPSSAVMAHYRA-VQ-PNAAARRGVAEMPKQILAARPLLARLAREVPATLGTKPTLLVWGMKDVAFRPKTILPRLRA 252 (286)
T ss_pred ccCCCCHHHHHHhcC-CC-CCHHHHHHHHHHHHhcchhhHHHHHhhhhhhhhcCCCCeEEEecCCCcccCcHHHHHHHHH
Confidence 111111111111111 00 11111111000 000 0 01111111 1389999999999998754 45788999
Q ss_pred HcCCCccEEEcCCCCCCCCCCChHHHHHHHHHHHH
Q 045774 238 HLGGPTVLEFLPTHGHLPHVSSPAPVANAIQQLLR 272 (275)
Q Consensus 238 ~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 272 (275)
.+++ .++++++++||++++|+|+++++.|.+|+.
T Consensus 253 ~ip~-~~~~~i~~aGH~~~~e~Pe~~~~~i~~~~~ 286 (286)
T PRK03204 253 TFPD-HVLVELPNAKHFIQEDAPDRIAAAIIERFG 286 (286)
T ss_pred hcCC-CeEEEcCCCcccccccCHHHHHHHHHHhcC
Confidence 9998 688999999999999999999999999973
No 14
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=100.00 E-value=4.2e-35 Score=240.67 Aligned_cols=248 Identities=25% Similarity=0.433 Sum_probs=169.7
Q ss_pred hhceEEecC--CCceEEEEcCCCCChhhhhhhHHHhhcCCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHh
Q 045774 14 ALNVRVVGQ--GQSIIVFSHGFGSDQSVWSRVIPSFTRAYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDAL 91 (275)
Q Consensus 14 ~~~~~~~g~--g~~~ivllHG~~~~~~~w~~~~~~l~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l 91 (275)
+++|+..|+ ++|+|||+||++++...|+++++.|.++|+|+++|+||||.|+... .. .+++++++++.++++.+
T Consensus 1 ~~~~~~~g~~~~~~~li~~hg~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~---~~-~~~~~~~~~~~~~i~~~ 76 (251)
T TIGR02427 1 RLHYRLDGAADGAPVLVFINSLGTDLRMWDPVLPALTPDFRVLRYDKRGHGLSDAPE---GP-YSIEDLADDVLALLDHL 76 (251)
T ss_pred CceEEeecCCCCCCeEEEEcCcccchhhHHHHHHHhhcccEEEEecCCCCCCCCCCC---CC-CCHHHHHHHHHHHHHHh
Confidence 367888876 4578999999999999999999999989999999999999986421 22 37999999999999999
Q ss_pred CCCceEEEEeChhHHHHHHHHHhCCccccceeeecCCCCCcCCCCCcCCCCcchHHHHHH-HHhhhhhhhhhhhcccccC
Q 045774 92 EIDRCAFVGHSVSAMIGLLAAIHRPNLFSRLILIGGSPRFTNDGNYIGGIDPAHMEEVFR-RMESNYESWVAGFVPMALG 170 (275)
Q Consensus 92 ~~~~~~lvGhS~GG~val~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 170 (275)
+.++++++||||||++++.+|.++|++|++++++++.........+. .....+.. ............+......
T Consensus 77 ~~~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (251)
T TIGR02427 77 GIERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPESWN-----ARIAAVRAEGLAALADAVLERWFTPGFR 151 (251)
T ss_pred CCCceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCchhhHH-----HHHhhhhhccHHHHHHHHHHHHcccccc
Confidence 99999999999999999999999999999999998643211100000 00000000 0000000000000000000
Q ss_pred CCCChHHHHHHHHHhhcCChHHHHHHHHHHhhhchHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHHcCCCccEEEcCC
Q 045774 171 ADVPDMALQEFSRTLFSMRPDIALHVARTAFAADLRHVLGLVRVPVCIIQSSVDLSVPPAVAEYMRRHLGGPTVLEFLPT 250 (275)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~ 250 (275)
.. .....+.+...+..................+....+.++++|+++|+|++|..+|.+..+.+.+.+++ .+++++++
T Consensus 152 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~ 229 (251)
T TIGR02427 152 EA-HPARLDLYRNMLVRQPPDGYAGCCAAIRDADFRDRLGAIAVPTLCIAGDQDGSTPPELVREIADLVPG-ARFAEIRG 229 (251)
T ss_pred cC-ChHHHHHHHHHHHhcCHHHHHHHHHHHhcccHHHHhhhcCCCeEEEEeccCCcCChHHHHHHHHhCCC-ceEEEECC
Confidence 00 11112222222211111111111122223345566788999999999999999999988888888887 57888999
Q ss_pred CCCCCCCCChHHHHHHHHHHHH
Q 045774 251 HGHLPHVSSPAPVANAIQQLLR 272 (275)
Q Consensus 251 ~gH~~~~e~p~~~~~~i~~fl~ 272 (275)
+||++++|+|+++++.|.+|+.
T Consensus 230 ~gH~~~~~~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 230 AGHIPCVEQPEAFNAALRDFLR 251 (251)
T ss_pred CCCcccccChHHHHHHHHHHhC
Confidence 9999999999999999999974
No 15
>PRK10673 acyl-CoA esterase; Provisional
Probab=100.00 E-value=9.4e-35 Score=240.92 Aligned_cols=240 Identities=19% Similarity=0.225 Sum_probs=162.8
Q ss_pred hceEEec-C---CCceEEEEcCCCCChhhhhhhHHHhhcCCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHH
Q 045774 15 LNVRVVG-Q---GQSIIVFSHGFGSDQSVWSRVIPSFTRAYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDA 90 (275)
Q Consensus 15 ~~~~~~g-~---g~~~ivllHG~~~~~~~w~~~~~~l~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~ 90 (275)
++|+..+ . ++++|||+||++++...|..++..|+++|+|+++|+||||.|.+. .. .+++++++|+.+++++
T Consensus 3 ~~~~~~~~~~~~~~~~iv~lhG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~s~~~----~~-~~~~~~~~d~~~~l~~ 77 (255)
T PRK10673 3 LNIRAQTAQNPHNNSPIVLVHGLFGSLDNLGVLARDLVNDHDIIQVDMRNHGLSPRD----PV-MNYPAMAQDLLDTLDA 77 (255)
T ss_pred ceeeeccCCCCCCCCCEEEECCCCCchhHHHHHHHHHhhCCeEEEECCCCCCCCCCC----CC-CCHHHHHHHHHHHHHH
Confidence 4565532 1 346899999999999999999999999999999999999999642 22 3799999999999999
Q ss_pred hCCCceEEEEeChhHHHHHHHHHhCCccccceeeecCCCCCcCCCCCcCCCCcchHHHHHHHHhhh----hhhh--hhhh
Q 045774 91 LEIDRCAFVGHSVSAMIGLLAAIHRPNLFSRLILIGGSPRFTNDGNYIGGIDPAHMEEVFRRMESN----YESW--VAGF 164 (275)
Q Consensus 91 l~~~~~~lvGhS~GG~val~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~--~~~~ 164 (275)
++.++++||||||||++++.+|.++|++|+++|++++++..... .........+... .... ....
T Consensus 78 l~~~~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (255)
T PRK10673 78 LQIEKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHV---------RRHDEIFAAINAVSEAGATTRQQAAAI 148 (255)
T ss_pred cCCCceEEEEECHHHHHHHHHHHhCHhhcceEEEEecCCCCccc---------hhhHHHHHHHHHhhhcccccHHHHHHH
Confidence 99999999999999999999999999999999999865432100 0000111111000 0000 0000
Q ss_pred cccccCCCCChHHHHHHHHHhhcCCh-HH-HHHHHHHHhhhchHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHHcCCC
Q 045774 165 VPMALGADVPDMALQEFSRTLFSMRP-DI-ALHVARTAFAADLRHVLGLVRVPVCIIQSSVDLSVPPAVAEYMRRHLGGP 242 (275)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~d~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~ 242 (275)
.... ........+......... .. ..............+.++.+++|+++|+|++|..++.+..+.+++.+++
T Consensus 149 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~- 223 (255)
T PRK10673 149 MRQH----LNEEGVIQFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWPHPALFIRGGNSPYVTEAYRDDLLAQFPQ- 223 (255)
T ss_pred HHHh----cCCHHHHHHHHhcCCcceeEeeHHHHHHhHHHHhCCcccCCCCCCeEEEECCCCCCCCHHHHHHHHHhCCC-
Confidence 0000 000001111110000000 00 0000000000111234667899999999999999999999999999987
Q ss_pred ccEEEcCCCCCCCCCCChHHHHHHHHHHHHh
Q 045774 243 TVLEFLPTHGHLPHVSSPAPVANAIQQLLRR 273 (275)
Q Consensus 243 ~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 273 (275)
.++++++++||++++|+|+++++.|.+|+..
T Consensus 224 ~~~~~~~~~gH~~~~~~p~~~~~~l~~fl~~ 254 (255)
T PRK10673 224 ARAHVIAGAGHWVHAEKPDAVLRAIRRYLND 254 (255)
T ss_pred cEEEEeCCCCCeeeccCHHHHHHHHHHHHhc
Confidence 5788899999999999999999999999975
No 16
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=100.00 E-value=4.3e-35 Score=241.19 Aligned_cols=234 Identities=20% Similarity=0.245 Sum_probs=149.9
Q ss_pred CceEEEEcCCCCChhhhhhhHHHhhcCCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhCCCceEEEEeCh
Q 045774 24 QSIIVFSHGFGSDQSVWSRVIPSFTRAYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALEIDRCAFVGHSV 103 (275)
Q Consensus 24 ~~~ivllHG~~~~~~~w~~~~~~l~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~ 103 (275)
.|+|||+||+++++..|+.+++.|+ +|+|+++|+||||.|+... . .+++.+++|+.+++++++++++++|||||
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~~~l~-~~~vi~~D~~G~G~S~~~~----~-~~~~~~~~~l~~~l~~~~~~~~~lvG~S~ 75 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVGEALP-DYPRLYIDLPGHGGSAAIS----V-DGFADVSRLLSQTLQSYNILPYWLVGYSL 75 (242)
T ss_pred CCEEEEECCCCCChHHHHHHHHHcC-CCCEEEecCCCCCCCCCcc----c-cCHHHHHHHHHHHHHHcCCCCeEEEEECH
Confidence 4689999999999999999999995 7999999999999996421 1 37999999999999999999999999999
Q ss_pred hHHHHHHHHHhCCcc-ccceeeecCCCCCcCCCCCcCCCCcchHHHHHHHHhh-hhhhhhhhhc-ccccCCCCChHHHHH
Q 045774 104 SAMIGLLAAIHRPNL-FSRLILIGGSPRFTNDGNYIGGIDPAHMEEVFRRMES-NYESWVAGFV-PMALGADVPDMALQE 180 (275)
Q Consensus 104 GG~val~~a~~~p~~-v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~ 180 (275)
||.+|+.+|.++|++ |++++++++.+............. ........+.. ........+. ..... .........
T Consensus 76 Gg~va~~~a~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 152 (242)
T PRK11126 76 GGRIAMYYACQGLAGGLCGLIVEGGNPGLQNAEERQARWQ--NDRQWAQRFRQEPLEQVLADWYQQPVFA-SLNAEQRQQ 152 (242)
T ss_pred HHHHHHHHHHhCCcccccEEEEeCCCCCCCCHHHHHHHHh--hhHHHHHHhccCcHHHHHHHHHhcchhh-ccCccHHHH
Confidence 999999999999765 999999876542211000000000 00000000000 0000000000 00000 011111122
Q ss_pred HHHHhhcCChHHHHHHHHHH---hhhchHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHHcCCCccEEEcCCCCCCCCC
Q 045774 181 FSRTLFSMRPDIALHVARTA---FAADLRHVLGLVRVPVCIIQSSVDLSVPPAVAEYMRRHLGGPTVLEFLPTHGHLPHV 257 (275)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~---~~~d~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~ 257 (275)
+................... ...++.+.+.++++|+++|+|++|..+. .+++.. + ++++++++|||++++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-----~~~~~~-~-~~~~~i~~~gH~~~~ 225 (242)
T PRK11126 153 LVAKRSNNNGAAVAAMLEATSLAKQPDLRPALQALTFPFYYLCGERDSKFQ-----ALAQQL-A-LPLHVIPNAGHNAHR 225 (242)
T ss_pred HHHhcccCCHHHHHHHHHhcCcccCCcHHHHhhccCCCeEEEEeCCcchHH-----HHHHHh-c-CeEEEeCCCCCchhh
Confidence 22111111111111111111 1234566788999999999999998552 233332 3 578899999999999
Q ss_pred CChHHHHHHHHHHHHh
Q 045774 258 SSPAPVANAIQQLLRR 273 (275)
Q Consensus 258 e~p~~~~~~i~~fl~~ 273 (275)
|+|+++++.|.+|+..
T Consensus 226 e~p~~~~~~i~~fl~~ 241 (242)
T PRK11126 226 ENPAAFAASLAQILRL 241 (242)
T ss_pred hChHHHHHHHHHHHhh
Confidence 9999999999999975
No 17
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=100.00 E-value=2.1e-34 Score=249.93 Aligned_cols=252 Identities=18% Similarity=0.230 Sum_probs=164.0
Q ss_pred hhceEEecCC-CceEEEEcCCCCChhhhhhhHHHhhcCCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhC
Q 045774 14 ALNVRVVGQG-QSIIVFSHGFGSDQSVWSRVIPSFTRAYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALE 92 (275)
Q Consensus 14 ~~~~~~~g~g-~~~ivllHG~~~~~~~w~~~~~~l~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~ 92 (275)
+++|+..|++ +++||||||++++...|+.+++.|+++|+|+++|+||||.|+.........++++++++++.+++++++
T Consensus 116 ~~~y~~~G~~~~~~ivllHG~~~~~~~w~~~~~~L~~~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~l~ 195 (383)
T PLN03084 116 RWFCVESGSNNNPPVLLIHGFPSQAYSYRKVLPVLSKNYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSLESLIDELK 195 (383)
T ss_pred EEEEEecCCCCCCeEEEECCCCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCCCcccccccCCHHHHHHHHHHHHHHhC
Confidence 3567777753 468999999999999999999999999999999999999997432111112479999999999999999
Q ss_pred CCceEEEEeChhHHHHHHHHHhCCccccceeeecCCCCCcCCCCCcCCCCcchHHHHHHHHhh-----hhhhhhhhhccc
Q 045774 93 IDRCAFVGHSVSAMIGLLAAIHRPNLFSRLILIGGSPRFTNDGNYIGGIDPAHMEEVFRRMES-----NYESWVAGFVPM 167 (275)
Q Consensus 93 ~~~~~lvGhS~GG~val~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 167 (275)
+++++||||||||++++.+|.++|++|+++|++++..... .. .. +.....+...+.. ............
T Consensus 196 ~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~-~~----~~-p~~l~~~~~~l~~~~~~~~~~~~~~~~~~~ 269 (383)
T PLN03084 196 SDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKE-HA----KL-PSTLSEFSNFLLGEIFSQDPLRASDKALTS 269 (383)
T ss_pred CCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCccc-cc----cc-hHHHHHHHHHHhhhhhhcchHHHHhhhhcc
Confidence 9999999999999999999999999999999998643210 00 00 0111111000000 000000000000
Q ss_pred ccCCCCChHHHHHHHHHhhcCC-hHHH-HHHHHHHh------hhchHhhh--CCCCCcEEEEEeCCCCCCCHHHHHHHHH
Q 045774 168 ALGADVPDMALQEFSRTLFSMR-PDIA-LHVARTAF------AADLRHVL--GLVRVPVCIIQSSVDLSVPPAVAEYMRR 237 (275)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~------~~d~~~~l--~~i~~P~l~i~G~~D~~~~~~~~~~~~~ 237 (275)
.......+.....+...+.... .... ....+.+. ..+....+ .++++|+++|+|++|.+++.+..+.+++
T Consensus 270 ~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~~l~~~~~~l~~~l~~~~i~vPvLiI~G~~D~~v~~~~~~~~a~ 349 (383)
T PLN03084 270 CGPYAMKEDDAMVYRRPYLTSGSSGFALNAISRSMKKELKKYIEEMRSILTDKNWKTPITVCWGLRDRWLNYDGVEDFCK 349 (383)
T ss_pred cCccCCCHHHHHHHhccccCCcchHHHHHHHHHHhhcccchhhHHHHhhhccccCCCCEEEEeeCCCCCcCHHHHHHHHH
Confidence 0000011111111211111100 0000 01111110 01122222 3689999999999999999998888887
Q ss_pred HcCCCccEEEcCCCCCCCCCCChHHHHHHHHHHHHh
Q 045774 238 HLGGPTVLEFLPTHGHLPHVSSPAPVANAIQQLLRR 273 (275)
Q Consensus 238 ~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 273 (275)
.. + ++++++++|||++++|+|++++++|.+|+.+
T Consensus 350 ~~-~-a~l~vIp~aGH~~~~E~Pe~v~~~I~~Fl~~ 383 (383)
T PLN03084 350 SS-Q-HKLIELPMAGHHVQEDCGEELGGIISGILSK 383 (383)
T ss_pred hc-C-CeEEEECCCCCCcchhCHHHHHHHHHHHhhC
Confidence 64 4 5789999999999999999999999999864
No 18
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=100.00 E-value=1.8e-35 Score=255.59 Aligned_cols=245 Identities=22% Similarity=0.304 Sum_probs=157.7
Q ss_pred hhceEEecCCCceEEEEcCCCCChh------------hhhhhHH---Hh-hcCCEEEEEccCCCCCCCCCCCCcccccch
Q 045774 14 ALNVRVVGQGQSIIVFSHGFGSDQS------------VWSRVIP---SF-TRAYRVISFDLMCSGSCDPTNYDFQRYATL 77 (275)
Q Consensus 14 ~~~~~~~g~g~~~ivllHG~~~~~~------------~w~~~~~---~l-~~~~~via~Dl~G~G~S~~~~~~~~~~~~~ 77 (275)
+++|+..|++++++||+||++++.. +|..+++ .| +++|+||++|+||||.|.+. . .++
T Consensus 47 ~l~y~~~G~~~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~~-----~-~~~ 120 (343)
T PRK08775 47 RLRYELIGPAGAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSLDV-----P-IDT 120 (343)
T ss_pred eEEEEEeccCCCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCCCC-----C-CCH
Confidence 4889999963335777776665554 7999986 56 46899999999999988431 1 358
Q ss_pred hHHHHHHHHHHHHhCCCce-EEEEeChhHHHHHHHHHhCCccccceeeecCCCCCcCCCCCcCCCCcchHHHHH------
Q 045774 78 DGYVDDLLSFLDALEIDRC-AFVGHSVSAMIGLLAAIHRPNLFSRLILIGGSPRFTNDGNYIGGIDPAHMEEVF------ 150 (275)
Q Consensus 78 ~~~a~dl~~~l~~l~~~~~-~lvGhS~GG~val~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~------ 150 (275)
+++++|+.+++++++++++ +||||||||+||+++|.++|++|+++|++++.+..... ...+ ....+..
T Consensus 121 ~~~a~dl~~ll~~l~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~~~~~---~~~~--~~~~~~~~~~~~~ 195 (343)
T PRK08775 121 ADQADAIALLLDALGIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHRAHPY---AAAW--RALQRRAVALGQL 195 (343)
T ss_pred HHHHHHHHHHHHHcCCCcceEEEEECHHHHHHHHHHHHChHhhheEEEECccccCCHH---HHHH--HHHHHHHHHcCCC
Confidence 9999999999999999775 79999999999999999999999999999876432100 0000 0000000
Q ss_pred -----------HHH----hhhhhhhhhhhccccc--CCCCChHHHHHHHH-----HhhcCChHHHHHHHHHHhhhch-Hh
Q 045774 151 -----------RRM----ESNYESWVAGFVPMAL--GADVPDMALQEFSR-----TLFSMRPDIALHVARTAFAADL-RH 207 (275)
Q Consensus 151 -----------~~~----~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~d~-~~ 207 (275)
... ......+...+..... ..... .....+.. ......+........ ..+. ..
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 271 (343)
T PRK08775 196 QCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVR-VAAEDYLDAAGAQYVARTPVNAYLRLSE---SIDLHRV 271 (343)
T ss_pred CCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCcc-chHHHHHHHHHHHHHHhcChhHHHHHHH---HHhhcCC
Confidence 000 0000000011110000 00000 00111110 111111111111111 1111 22
Q ss_pred hhCCCCCcEEEEEeCCCCCCCHHHHHHHHHHc-CCCccEEEcCC-CCCCCCCCChHHHHHHHHHHHHhh
Q 045774 208 VLGLVRVPVCIIQSSVDLSVPPAVAEYMRRHL-GGPTVLEFLPT-HGHLPHVSSPAPVANAIQQLLRRR 274 (275)
Q Consensus 208 ~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~-~~~~~~~~i~~-~gH~~~~e~p~~~~~~i~~fl~~~ 274 (275)
.+++|++|+|+|+|++|.++|++..+.+.+.+ ++ ++++++++ +||++++|+|++|++.|++||.++
T Consensus 272 ~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p~-a~l~~i~~~aGH~~~lE~Pe~~~~~l~~FL~~~ 339 (343)
T PRK08775 272 DPEAIRVPTVVVAVEGDRLVPLADLVELAEGLGPR-GSLRVLRSPYGHDAFLKETDRIDAILTTALRST 339 (343)
T ss_pred ChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcCCC-CeEEEEeCCccHHHHhcCHHHHHHHHHHHHHhc
Confidence 36789999999999999999988888888877 55 68889984 999999999999999999999875
No 19
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=100.00 E-value=2.1e-34 Score=254.71 Aligned_cols=247 Identities=19% Similarity=0.340 Sum_probs=161.2
Q ss_pred hhceEEecCC----CceEEEEcCCCCChhhhhh-hHHHhh----cCCEEEEEccCCCCCCCCCCCCcccccchhHHHHHH
Q 045774 14 ALNVRVVGQG----QSIIVFSHGFGSDQSVWSR-VIPSFT----RAYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDL 84 (275)
Q Consensus 14 ~~~~~~~g~g----~~~ivllHG~~~~~~~w~~-~~~~l~----~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl 84 (275)
+++|...|+. +++|||+||++++...|.. +++.|. .+|+|+++|+||||.|+... ...++++++++++
T Consensus 187 ~l~~~~~gp~~~~~k~~VVLlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~---~~~ytl~~~a~~l 263 (481)
T PLN03087 187 SLFVHVQQPKDNKAKEDVLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPA---DSLYTLREHLEMI 263 (481)
T ss_pred EEEEEEecCCCCCCCCeEEEECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCC---CCcCCHHHHHHHH
Confidence 6888887752 3689999999999999985 456665 47999999999999996421 1224799999999
Q ss_pred H-HHHHHhCCCceEEEEeChhHHHHHHHHHhCCccccceeeecCCCCCcCCCCCcCCCCcchHHHHHHHH----------
Q 045774 85 L-SFLDALEIDRCAFVGHSVSAMIGLLAAIHRPNLFSRLILIGGSPRFTNDGNYIGGIDPAHMEEVFRRM---------- 153 (275)
Q Consensus 85 ~-~~l~~l~~~~~~lvGhS~GG~val~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 153 (275)
. .++++++.+++++|||||||++++.+|.++|++|+++|++++........ ... ........
T Consensus 264 ~~~ll~~lg~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~~~~-----~~~--~~~~~~~~~~~~~~~~~~ 336 (481)
T PLN03087 264 ERSVLERYKVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYYPVPKG-----VQA--TQYVMRKVAPRRVWPPIA 336 (481)
T ss_pred HHHHHHHcCCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCccccccc-----hhH--HHHHHHHhcccccCCccc
Confidence 5 89999999999999999999999999999999999999998643211100 000 00000000
Q ss_pred -hhhhhhhhhhhccc---ccCCCCChHHHHH-------------HHHHhhcCChHHHHHHHH-HHh------hhchHhhh
Q 045774 154 -ESNYESWVAGFVPM---ALGADVPDMALQE-------------FSRTLFSMRPDIALHVAR-TAF------AADLRHVL 209 (275)
Q Consensus 154 -~~~~~~~~~~~~~~---~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~-~~~------~~d~~~~l 209 (275)
......|....... ...... ...+. ..+.+............. ... .......+
T Consensus 337 ~~~~~~~w~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~l~~l~ 414 (481)
T PLN03087 337 FGASVACWYEHISRTICLVICKNH--RLWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLHNIICGSGSKLDGYLDHVR 414 (481)
T ss_pred cchhHHHHHHHHHhhhhcccccch--HHHHHHHHHhhhhhhhHHHHHHHHhccchhhHHHHHHHHhchhhhhhhHHHHHH
Confidence 00000010000000 000000 00000 000000000000000000 000 11122334
Q ss_pred CCCCCcEEEEEeCCCCCCCHHHHHHHHHHcCCCccEEEcCCCCCCCCC-CChHHHHHHHHHHHHh
Q 045774 210 GLVRVPVCIIQSSVDLSVPPAVAEYMRRHLGGPTVLEFLPTHGHLPHV-SSPAPVANAIQQLLRR 273 (275)
Q Consensus 210 ~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~ 273 (275)
.+|++|+|+|+|++|.++|++..+.+++.+|+ ++++++++|||++++ |+|+++++.|++|...
T Consensus 415 ~~I~vPtLII~Ge~D~ivP~~~~~~la~~iP~-a~l~vI~~aGH~~~v~e~p~~fa~~L~~F~~~ 478 (481)
T PLN03087 415 DQLKCDVAIFHGGDDELIPVECSYAVKAKVPR-ARVKVIDDKDHITIVVGRQKEFARELEEIWRR 478 (481)
T ss_pred HhCCCCEEEEEECCCCCCCHHHHHHHHHhCCC-CEEEEeCCCCCcchhhcCHHHHHHHHHHHhhc
Confidence 57999999999999999999999999999998 689999999999996 9999999999999864
No 20
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=100.00 E-value=2e-34 Score=238.09 Aligned_cols=248 Identities=23% Similarity=0.366 Sum_probs=167.3
Q ss_pred hceEEecC---CCceEEEEcCCCCChhhhhhhHHHhhcCCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHh
Q 045774 15 LNVRVVGQ---GQSIIVFSHGFGSDQSVWSRVIPSFTRAYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDAL 91 (275)
Q Consensus 15 ~~~~~~g~---g~~~ivllHG~~~~~~~w~~~~~~l~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l 91 (275)
++|.+.|+ +.|+|||+||+++++..|..+++.|.++|+|+++|+||||.|+... ... .+++++++++.++++++
T Consensus 1 ~~~~~~~~~~~~~~~iv~lhG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~--~~~-~~~~~~~~~~~~~i~~~ 77 (257)
T TIGR03611 1 MHYELHGPPDADAPVVVLSSGLGGSGSYWAPQLDVLTQRFHVVTYDHRGTGRSPGEL--PPG-YSIAHMADDVLQLLDAL 77 (257)
T ss_pred CEEEEecCCCCCCCEEEEEcCCCcchhHHHHHHHHHHhccEEEEEcCCCCCCCCCCC--ccc-CCHHHHHHHHHHHHHHh
Confidence 36777774 4568999999999999999999999999999999999999996421 122 47999999999999999
Q ss_pred CCCceEEEEeChhHHHHHHHHHhCCccccceeeecCCCCCcCCCCCcCCCCcchHHHHHHHHhhh-hhhhhhhhcccccC
Q 045774 92 EIDRCAFVGHSVSAMIGLLAAIHRPNLFSRLILIGGSPRFTNDGNYIGGIDPAHMEEVFRRMESN-YESWVAGFVPMALG 170 (275)
Q Consensus 92 ~~~~~~lvGhS~GG~val~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 170 (275)
+.++++++||||||++++.+|.++|++|+++|++++....... ...........+... ...+..........
T Consensus 78 ~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (257)
T TIGR03611 78 NIERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRPDPH-------TRRCFDVRIALLQHAGPEAYVHAQALFLYP 150 (257)
T ss_pred CCCcEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCCChh-------HHHHHHHHHHHHhccCcchhhhhhhhhhcc
Confidence 9999999999999999999999999999999999864321100 000000000000000 00000000000000
Q ss_pred CC----CChHHHHHHHHHhhcC-ChHHHHHHHHHHhhhchHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHHcCCCccE
Q 045774 171 AD----VPDMALQEFSRTLFSM-RPDIALHVARTAFAADLRHVLGLVRVPVCIIQSSVDLSVPPAVAEYMRRHLGGPTVL 245 (275)
Q Consensus 171 ~~----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~ 245 (275)
.. ......+......... ...............+....+.++++|+++++|++|..+|++..+.+.+.+++ .++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~ 229 (257)
T TIGR03611 151 ADWISENAARLAADEAHALAHFPGKANVLRRINALEAFDVSARLDRIQHPVLLIANRDDMLVPYTQSLRLAAALPN-AQL 229 (257)
T ss_pred ccHhhccchhhhhhhhhcccccCccHHHHHHHHHHHcCCcHHHhcccCccEEEEecCcCcccCHHHHHHHHHhcCC-ceE
Confidence 00 0000000000000000 00111111112223355567888999999999999999999998889988887 578
Q ss_pred EEcCCCCCCCCCCChHHHHHHHHHHHHh
Q 045774 246 EFLPTHGHLPHVSSPAPVANAIQQLLRR 273 (275)
Q Consensus 246 ~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 273 (275)
+.++++||++++|+|+++++.|.+||++
T Consensus 230 ~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 257 (257)
T TIGR03611 230 KLLPYGGHASNVTDPETFNRALLDFLKT 257 (257)
T ss_pred EEECCCCCCccccCHHHHHHHHHHHhcC
Confidence 8899999999999999999999999863
No 21
>PRK07581 hypothetical protein; Validated
Probab=100.00 E-value=1.9e-34 Score=248.99 Aligned_cols=259 Identities=18% Similarity=0.217 Sum_probs=161.1
Q ss_pred hhceEEecC----CCceEEEEcCCCCChhhhhhhH---HHhh-cCCEEEEEccCCCCCCCCCCCCcccccchhH-----H
Q 045774 14 ALNVRVVGQ----GQSIIVFSHGFGSDQSVWSRVI---PSFT-RAYRVISFDLMCSGSCDPTNYDFQRYATLDG-----Y 80 (275)
Q Consensus 14 ~~~~~~~g~----g~~~ivllHG~~~~~~~w~~~~---~~l~-~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~-----~ 80 (275)
+++|+..|+ ++++|||+||++.++.+|..++ +.|. ++|+||++|+||||.|+........ ++++. +
T Consensus 27 ~l~y~~~G~~~~~~~~~vll~~~~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~-~~~~~~~~~~~ 105 (339)
T PRK07581 27 RLAYKTYGTLNAAKDNAILYPTWYSGTHQDNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAP-FNAARFPHVTI 105 (339)
T ss_pred eEEEEecCccCCCCCCEEEEeCCCCCCcccchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCC-CCCCCCCceeH
Confidence 478988886 3346777788887888887654 4665 5799999999999999632111011 23433 5
Q ss_pred HHHHHH----HHHHhCCCc-eEEEEeChhHHHHHHHHHhCCccccceeeecCCCCCcC---------------CCCCcCC
Q 045774 81 VDDLLS----FLDALEIDR-CAFVGHSVSAMIGLLAAIHRPNLFSRLILIGGSPRFTN---------------DGNYIGG 140 (275)
Q Consensus 81 a~dl~~----~l~~l~~~~-~~lvGhS~GG~val~~a~~~p~~v~~lvli~~~~~~~~---------------~~~~~~~ 140 (275)
++|+.+ ++++|++++ ++||||||||++|+.+|.+||++|+++|++++.+.... ...+...
T Consensus 106 ~~~~~~~~~~l~~~lgi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 185 (339)
T PRK07581 106 YDNVRAQHRLLTEKFGIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAKTTPHNFVFLEGLKAALTADPAFNGG 185 (339)
T ss_pred HHHHHHHHHHHHHHhCCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCCCCHHHHHHHHHHHHHHHhCCCCCCC
Confidence 666655 778899999 58999999999999999999999999999987653110 0001000
Q ss_pred CCc----chHHHHHHHHhh--hhhhhhhhhcccccCCCCChHHHHHHHHHh-hcCChHHHHHHHHHH-----h-----hh
Q 045774 141 IDP----AHMEEVFRRMES--NYESWVAGFVPMALGADVPDMALQEFSRTL-FSMRPDIALHVARTA-----F-----AA 203 (275)
Q Consensus 141 ~~~----~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-----~-----~~ 203 (275)
... .....+...... ....+..................+.+.... ....+.......... . ..
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 265 (339)
T PRK07581 186 WYAEPPERGLRAHARVYAGWGFSQAFYRQELWRAMGYASLEDFLVGFWEGNFLPRDPNNLLAMLWTWQRGDISRNPAYGG 265 (339)
T ss_pred CCCCcHHHHHHHHHHHHHHHHhHHHHHHhhhccccChhhHHHHHHHHHHHhhcccCcccHHHHHHHhhhcccccCcccCC
Confidence 000 000010000000 000110000000000000011111222111 111222111111111 0 12
Q ss_pred chHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHHcCCCccEEEcCC-CCCCCCCCChHHHHHHHHHHHHhh
Q 045774 204 DLRHVLGLVRVPVCIIQSSVDLSVPPAVAEYMRRHLGGPTVLEFLPT-HGHLPHVSSPAPVANAIQQLLRRR 274 (275)
Q Consensus 204 d~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~-~gH~~~~e~p~~~~~~i~~fl~~~ 274 (275)
+....+++|++|+|+|+|++|..+|++..+.+++.+++ ++++++++ |||++++|+|+++++.|++||.+-
T Consensus 266 d~~~~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~ip~-a~l~~i~~~~GH~~~~~~~~~~~~~~~~~~~~~ 336 (339)
T PRK07581 266 DLAAALGSITAKTFVMPISTDLYFPPEDCEAEAALIPN-AELRPIESIWGHLAGFGQNPADIAFIDAALKEL 336 (339)
T ss_pred CHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCC-CeEEEeCCCCCccccccCcHHHHHHHHHHHHHH
Confidence 56677889999999999999999999999999999988 68889998 999999999999999999999863
No 22
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=100.00 E-value=3.7e-34 Score=239.88 Aligned_cols=247 Identities=21% Similarity=0.291 Sum_probs=165.2
Q ss_pred hceEEecC-CCceEEEEcCCCCChhhhhhhHHHhhcCCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhCC
Q 045774 15 LNVRVVGQ-GQSIIVFSHGFGSDQSVWSRVIPSFTRAYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALEI 93 (275)
Q Consensus 15 ~~~~~~g~-g~~~ivllHG~~~~~~~w~~~~~~l~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~ 93 (275)
++|+..|+ +.++|||+||++++...|+.+++.|+++|+|+++|+||||.|+... ....+++.+++|+.+++++++.
T Consensus 18 ~~~~~~g~~~~~~vv~~hG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~---~~~~~~~~~~~~l~~~i~~~~~ 94 (278)
T TIGR03056 18 WHVQDMGPTAGPLLLLLHGTGASTHSWRDLMPPLARSFRVVAPDLPGHGFTRAPF---RFRFTLPSMAEDLSALCAAEGL 94 (278)
T ss_pred EEEEecCCCCCCeEEEEcCCCCCHHHHHHHHHHHhhCcEEEeecCCCCCCCCCcc---ccCCCHHHHHHHHHHHHHHcCC
Confidence 55776665 2368999999999999999999999989999999999999996422 1124799999999999999999
Q ss_pred CceEEEEeChhHHHHHHHHHhCCccccceeeecCCCCCcCCCCCcCCCCcchHHHHH----------HHHhhhhhhhhhh
Q 045774 94 DRCAFVGHSVSAMIGLLAAIHRPNLFSRLILIGGSPRFTNDGNYIGGIDPAHMEEVF----------RRMESNYESWVAG 163 (275)
Q Consensus 94 ~~~~lvGhS~GG~val~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~ 163 (275)
++++|+||||||++++.+|.++|++++++|++++........ .. .......... .........+. .
T Consensus 95 ~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 170 (278)
T TIGR03056 95 SPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGM--AG-TLFPYMARVLACNPFTPPMMSRGAADQQRVE-R 170 (278)
T ss_pred CCceEEEECccHHHHHHHHHhCCcccceEEEEcCcccccccc--cc-cccchhhHhhhhcccchHHHHhhcccCcchh-H
Confidence 999999999999999999999999999999998753211100 00 0000000000 00000000000 0
Q ss_pred hcccccCCCCChHHHHHHHHHhhcCChHHHHHHHHHHh---hhchHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHHcC
Q 045774 164 FVPMALGADVPDMALQEFSRTLFSMRPDIALHVARTAF---AADLRHVLGLVRVPVCIIQSSVDLSVPPAVAEYMRRHLG 240 (275)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~d~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~ 240 (275)
+... ............+.. ... .+........... ..+....++++++|+++|+|++|..+|.+..+.+.+.++
T Consensus 171 ~~~~-~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~g~~D~~vp~~~~~~~~~~~~ 247 (278)
T TIGR03056 171 LIRD-TGSLLDKAGMTYYGR-LIR-SPAHVDGALSMMAQWDLAPLNRDLPRITIPLHLIAGEEDKAVPPDESKRAATRVP 247 (278)
T ss_pred Hhhc-cccccccchhhHHHH-hhc-CchhhhHHHHHhhcccccchhhhcccCCCCEEEEEeCCCcccCHHHHHHHHHhcc
Confidence 0000 000001110111111 110 0000000111111 112334577899999999999999999999899988888
Q ss_pred CCccEEEcCCCCCCCCCCChHHHHHHHHHHHH
Q 045774 241 GPTVLEFLPTHGHLPHVSSPAPVANAIQQLLR 272 (275)
Q Consensus 241 ~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 272 (275)
+ .+++.++++||++++|+|++++++|.+|++
T Consensus 248 ~-~~~~~~~~~gH~~~~e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 248 T-ATLHVVPGGGHLVHEEQADGVVGLILQAAE 278 (278)
T ss_pred C-CeEEEECCCCCcccccCHHHHHHHHHHHhC
Confidence 7 578889999999999999999999999984
No 23
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=100.00 E-value=2.2e-34 Score=249.64 Aligned_cols=259 Identities=20% Similarity=0.287 Sum_probs=166.1
Q ss_pred hhhceEEecC----CCceEEEEcCCCCChh-----------hhhhhH----HHhhcCCEEEEEccCC--CCCCCCCCCC-
Q 045774 13 EALNVRVVGQ----GQSIIVFSHGFGSDQS-----------VWSRVI----PSFTRAYRVISFDLMC--SGSCDPTNYD- 70 (275)
Q Consensus 13 ~~~~~~~~g~----g~~~ivllHG~~~~~~-----------~w~~~~----~~l~~~~~via~Dl~G--~G~S~~~~~~- 70 (275)
.+++|+.+|. ++++|||+||+++++. +|+.++ ..+.++|+|+++|+|| ||.|.++...
T Consensus 16 ~~~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~~~~~ 95 (351)
T TIGR01392 16 VRVAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPSSINP 95 (351)
T ss_pred ceEEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCCCCCC
Confidence 3589999984 3468999999999763 589887 4446789999999999 6666542110
Q ss_pred -c------ccccchhHHHHHHHHHHHHhCCCc-eEEEEeChhHHHHHHHHHhCCccccceeeecCCCCCcCCC-------
Q 045774 71 -F------QRYATLDGYVDDLLSFLDALEIDR-CAFVGHSVSAMIGLLAAIHRPNLFSRLILIGGSPRFTNDG------- 135 (275)
Q Consensus 71 -~------~~~~~~~~~a~dl~~~l~~l~~~~-~~lvGhS~GG~val~~a~~~p~~v~~lvli~~~~~~~~~~------- 135 (275)
. ...++++++++++.++++++++++ ++||||||||++++.+|.++|++|+++|++++.+......
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 175 (351)
T TIGR01392 96 GGRPYGSDFPLITIRDDVKAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSARHSAWCIAFNEVQ 175 (351)
T ss_pred CCCcCCCCCCCCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCCcCCHHHHHHHHHH
Confidence 0 012479999999999999999999 9999999999999999999999999999999765321100
Q ss_pred --------CCcC-CCC----cchHH---HHHHHHh-hhhhhhhhhhcccccCCCCC------hHHHHHHH-----HHhhc
Q 045774 136 --------NYIG-GID----PAHME---EVFRRME-SNYESWVAGFVPMALGADVP------DMALQEFS-----RTLFS 187 (275)
Q Consensus 136 --------~~~~-~~~----~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~------~~~~~~~~-----~~~~~ 187 (275)
.+.. .+. +.... ....... .....+...+.........+ ....+.+. +....
T Consensus 176 ~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (351)
T TIGR01392 176 RQAILADPNWNDGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFGRAPQSGESPASGFDTRFQVESYLRYQGDKFVDR 255 (351)
T ss_pred HHHHHhCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCcCcccccccccccCccchHHHHHHHHHHHHHhh
Confidence 0000 000 00000 0000000 00011111111111000000 00011111 11112
Q ss_pred CChHHHHHHHHHHhh-------hchHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHHcCCCccEE-----EcCCCCCCC
Q 045774 188 MRPDIALHVARTAFA-------ADLRHVLGLVRVPVCIIQSSVDLSVPPAVAEYMRRHLGGPTVLE-----FLPTHGHLP 255 (275)
Q Consensus 188 ~~~~~~~~~~~~~~~-------~d~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~-----~i~~~gH~~ 255 (275)
..+.........+.. .+..+.+++|++|+|+|+|++|.++|+...+.+++.+++. +++ ++++|||++
T Consensus 256 ~d~~~~~~~~~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~~-~~~v~~~~i~~~~GH~~ 334 (351)
T TIGR01392 256 FDANSYLYLTRALDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWLFPPAESRELAKALPAA-GLRVTYVEIESPYGHDA 334 (351)
T ss_pred cCcchHHHHHHHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccccCHHHHHHHHHHHhhc-CCceEEEEeCCCCCcch
Confidence 222222111112211 2356788999999999999999999999999999999874 443 567999999
Q ss_pred CCCChHHHHHHHHHHHH
Q 045774 256 HVSSPAPVANAIQQLLR 272 (275)
Q Consensus 256 ~~e~p~~~~~~i~~fl~ 272 (275)
++|+|++|++.|.+||+
T Consensus 335 ~le~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 335 FLVETDQVEELIRGFLR 351 (351)
T ss_pred hhcCHHHHHHHHHHHhC
Confidence 99999999999999984
No 24
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=100.00 E-value=2.1e-33 Score=245.40 Aligned_cols=261 Identities=18% Similarity=0.276 Sum_probs=165.5
Q ss_pred hhceEEecC----CCceEEEEcCCCCChh-------------hhhhhH----HHhhcCCEEEEEccCCC-CCC-CCCCCC
Q 045774 14 ALNVRVVGQ----GQSIIVFSHGFGSDQS-------------VWSRVI----PSFTRAYRVISFDLMCS-GSC-DPTNYD 70 (275)
Q Consensus 14 ~~~~~~~g~----g~~~ivllHG~~~~~~-------------~w~~~~----~~l~~~~~via~Dl~G~-G~S-~~~~~~ 70 (275)
+++|+.+|+ ++|+|||+||+++++. +|+.++ +.+.++|+||++|++|+ |.| .++...
T Consensus 34 ~~~y~~~G~~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~~~~~ 113 (379)
T PRK00175 34 ELAYETYGTLNADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGPSSIN 113 (379)
T ss_pred eEEEEeccccCCCCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCCCCCC
Confidence 478898885 2468999999999987 477776 34477899999999993 444 332100
Q ss_pred c---c------cccchhHHHHHHHHHHHHhCCCc-eEEEEeChhHHHHHHHHHhCCccccceeeecCCCCCcCC------
Q 045774 71 F---Q------RYATLDGYVDDLLSFLDALEIDR-CAFVGHSVSAMIGLLAAIHRPNLFSRLILIGGSPRFTND------ 134 (275)
Q Consensus 71 ~---~------~~~~~~~~a~dl~~~l~~l~~~~-~~lvGhS~GG~val~~a~~~p~~v~~lvli~~~~~~~~~------ 134 (275)
+ . ..+|++++++++.++++++++++ ++||||||||++++.+|.++|++|+++|++++.+.....
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 193 (379)
T PRK00175 114 PDTGKPYGSDFPVITIRDWVRAQARLLDALGITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSARLSAQNIAFNE 193 (379)
T ss_pred CCCCCcccCCCCcCCHHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCcccCHHHHHHHH
Confidence 0 0 02479999999999999999999 599999999999999999999999999999876532110
Q ss_pred ---------CCCcC-CC---CcchHHHH-HHH----Hh-hhhhhhhhhhcccccCCC----CC-hHHHHHHH----H-Hh
Q 045774 135 ---------GNYIG-GI---DPAHMEEV-FRR----ME-SNYESWVAGFVPMALGAD----VP-DMALQEFS----R-TL 185 (275)
Q Consensus 135 ---------~~~~~-~~---~~~~~~~~-~~~----~~-~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~----~-~~ 185 (275)
..+.. .+ ........ ... .. .........+........ .. ....+.+. . ..
T Consensus 194 ~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 273 (379)
T PRK00175 194 VARQAILADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELPFGFDVEFQVESYLRYQGDKFV 273 (379)
T ss_pred HHHHHHHhCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccccccCCCccchHHHHHHHHHHHHh
Confidence 00000 00 00000000 000 00 000001111111100000 00 00011111 1 11
Q ss_pred hcCChHHHHHHHHHHhh--------hchHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHHcCCCc---cEEEc-CCCCC
Q 045774 186 FSMRPDIALHVARTAFA--------ADLRHVLGLVRVPVCIIQSSVDLSVPPAVAEYMRRHLGGPT---VLEFL-PTHGH 253 (275)
Q Consensus 186 ~~~~~~~~~~~~~~~~~--------~d~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~---~~~~i-~~~gH 253 (275)
....++........+.. .+..+.+.+|++|+|+|+|++|.++|++..+.+++.+++.. +++++ ++|||
T Consensus 274 ~~~d~~~~~~~~~~~~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D~~~p~~~~~~la~~i~~a~~~~~l~~i~~~~GH 353 (379)
T PRK00175 274 ERFDANSYLYLTRALDYFDPARGRGGDLAAALARIKARFLVVSFTSDWLFPPARSREIVDALLAAGADVSYAEIDSPYGH 353 (379)
T ss_pred hccCchHHHHHHHHHHhccccCCCCCCHHHHHhcCCCCEEEEEECCccccCHHHHHHHHHHHHhcCCCeEEEEeCCCCCc
Confidence 11222221111111111 24677889999999999999999999999999999998731 45556 48999
Q ss_pred CCCCCChHHHHHHHHHHHHhh
Q 045774 254 LPHVSSPAPVANAIQQLLRRR 274 (275)
Q Consensus 254 ~~~~e~p~~~~~~i~~fl~~~ 274 (275)
++++|+|++|++.|++||.+.
T Consensus 354 ~~~le~p~~~~~~L~~FL~~~ 374 (379)
T PRK00175 354 DAFLLDDPRYGRLVRAFLERA 374 (379)
T ss_pred hhHhcCHHHHHHHHHHHHHhh
Confidence 999999999999999999864
No 25
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=100.00 E-value=2.3e-33 Score=243.10 Aligned_cols=250 Identities=15% Similarity=0.263 Sum_probs=161.1
Q ss_pred hceEEecC----CCceEEEEcCCCCChh-hhhhhHHHhhc-CCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHH
Q 045774 15 LNVRVVGQ----GQSIIVFSHGFGSDQS-VWSRVIPSFTR-AYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFL 88 (275)
Q Consensus 15 ~~~~~~g~----g~~~ivllHG~~~~~~-~w~~~~~~l~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l 88 (275)
++|+.++. ..++|||+||++++.. .|..+++.|++ +|+|+++|+||||.|+... ....+++++++|+.+++
T Consensus 74 l~~~~~~p~~~~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~---~~~~~~~~~~~dv~~~l 150 (349)
T PLN02385 74 IFSKSWLPENSRPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLH---GYIPSFDDLVDDVIEHY 150 (349)
T ss_pred EEEEEEecCCCCCCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCC---CCcCCHHHHHHHHHHHH
Confidence 56666653 2357999999998865 46889988876 7999999999999996421 11137899999999999
Q ss_pred HHhCCC------ceEEEEeChhHHHHHHHHHhCCccccceeeecCCCCCcCCCCCcCCCCcchHHHHHHHHhhhhhhhhh
Q 045774 89 DALEID------RCAFVGHSVSAMIGLLAAIHRPNLFSRLILIGGSPRFTNDGNYIGGIDPAHMEEVFRRMESNYESWVA 162 (275)
Q Consensus 89 ~~l~~~------~~~lvGhS~GG~val~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (275)
+.+..+ +++|+||||||++++.++.++|++|+++|++++........ ........+...+......+.
T Consensus 151 ~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~-----~~~~~~~~~~~~~~~~~p~~~- 224 (349)
T PLN02385 151 SKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDV-----VPPPLVLQILILLANLLPKAK- 224 (349)
T ss_pred HHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccccccccc-----cCchHHHHHHHHHHHHCCCce-
Confidence 887543 79999999999999999999999999999998754321110 011111111111111000000
Q ss_pred hhccccc-CCCCChHHHHHHHHH---hhcCChHHHHHHHHHH-hhhchHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHH
Q 045774 163 GFVPMAL-GADVPDMALQEFSRT---LFSMRPDIALHVARTA-FAADLRHVLGLVRVPVCIIQSSVDLSVPPAVAEYMRR 237 (275)
Q Consensus 163 ~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~-~~~d~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~ 237 (275)
.+..... .............+. .+...... ......+ ...+....+.++++|+|+|+|++|.++|.+.++.+.+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~l~~i~~P~Lii~G~~D~vv~~~~~~~l~~ 303 (349)
T PLN02385 225 LVPQKDLAELAFRDLKKRKMAEYNVIAYKDKPRL-RTAVELLRTTQEIEMQLEEVSLPLLILHGEADKVTDPSVSKFLYE 303 (349)
T ss_pred ecCCCccccccccCHHHHHHhhcCcceeCCCcch-HHHHHHHHHHHHHHHhcccCCCCEEEEEeCCCCccChHHHHHHHH
Confidence 0000000 000000000011110 00000111 1111111 1234556688899999999999999999999998988
Q ss_pred HcCC-CccEEEcCCCCCCCCCCChHH----HHHHHHHHHHhh
Q 045774 238 HLGG-PTVLEFLPTHGHLPHVSSPAP----VANAIQQLLRRR 274 (275)
Q Consensus 238 ~~~~-~~~~~~i~~~gH~~~~e~p~~----~~~~i~~fl~~~ 274 (275)
.+++ .+++++++++||+++.|+|++ +++.|.+||.++
T Consensus 304 ~~~~~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~ 345 (349)
T PLN02385 304 KASSSDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSH 345 (349)
T ss_pred HcCCCCceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHHh
Confidence 8743 258999999999999999987 888899999864
No 26
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=100.00 E-value=9e-34 Score=229.05 Aligned_cols=226 Identities=29% Similarity=0.491 Sum_probs=153.8
Q ss_pred EEEEcCCCCChhhhhhhHHHhhcCCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhCCCceEEEEeChhHH
Q 045774 27 IVFSHGFGSDQSVWSRVIPSFTRAYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALEIDRCAFVGHSVSAM 106 (275)
Q Consensus 27 ivllHG~~~~~~~w~~~~~~l~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~GG~ 106 (275)
|||+||++++...|+.+++.|+++|+|+++|+||||.|+.... ....+++++++|+.+++++++.+++++||||+||.
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~--~~~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~ 78 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEALARGYRVIAFDLPGHGRSDPPPD--YSPYSIEDYAEDLAELLDALGIKKVILVGHSMGGM 78 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHHHTTSEEEEEECTTSTTSSSHSS--GSGGSHHHHHHHHHHHHHHTTTSSEEEEEETHHHH
T ss_pred eEEECCCCCCHHHHHHHHHHHhCCCEEEEEecCCccccccccc--cCCcchhhhhhhhhhcccccccccccccccccccc
Confidence 7999999999999999999998899999999999999975221 12347999999999999999999999999999999
Q ss_pred HHHHHHHhCCccccceeeecCCCCCcCCCCCcCCCCcchHHHHHHHHhhhhhhhhh-hhcccccCCCCChHHHHHHHHHh
Q 045774 107 IGLLAAIHRPNLFSRLILIGGSPRFTNDGNYIGGIDPAHMEEVFRRMESNYESWVA-GFVPMALGADVPDMALQEFSRTL 185 (275)
Q Consensus 107 val~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 185 (275)
+++.++.++|++|+++|++++......... .......+..+..........+.. .+.... .........+.
T Consensus 79 ~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~- 150 (228)
T PF12697_consen 79 IALRLAARYPDRVKGLVLLSPPPPLPDSPS--RSFGPSFIRRLLAWRSRSLRRLASRFFYRWF-----DGDEPEDLIRS- 150 (228)
T ss_dssp HHHHHHHHSGGGEEEEEEESESSSHHHHHC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----THHHHHHHHHH-
T ss_pred cccccccccccccccceeeccccccccccc--ccccchhhhhhhhcccccccccccccccccc-----ccccccccccc-
Confidence 999999999999999999987543210000 000000011111110000011100 000000 00001111111
Q ss_pred hcCChHHHHHHHHH-HhhhchHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHHcCCCccEEEcCCCCCCCCCCChHHHH
Q 045774 186 FSMRPDIALHVART-AFAADLRHVLGLVRVPVCIIQSSVDLSVPPAVAEYMRRHLGGPTVLEFLPTHGHLPHVSSPAPVA 264 (275)
Q Consensus 186 ~~~~~~~~~~~~~~-~~~~d~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~ 264 (275)
........... ....+....++++++|+++|+|++|..++.+..+.+.+.+++ .++++++++||++++|+|++|+
T Consensus 151 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~p~~~~ 226 (228)
T PF12697_consen 151 ---SRRALAEYLRSNLWQADLSEALPRIKVPVLVIHGEDDPIVPPESAEELADKLPN-AELVVIPGAGHFLFLEQPDEVA 226 (228)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHHHHHHSTT-EEEEEETTSSSTHHHHSHHHHH
T ss_pred ---cccccccccccccccccccccccccCCCeEEeecCCCCCCCHHHHHHHHHHCCC-CEEEEECCCCCccHHHCHHHHh
Confidence 00011111111 233455677888899999999999999999888999988887 6899999999999999999998
Q ss_pred HH
Q 045774 265 NA 266 (275)
Q Consensus 265 ~~ 266 (275)
++
T Consensus 227 ~a 228 (228)
T PF12697_consen 227 EA 228 (228)
T ss_dssp HH
T ss_pred cC
Confidence 74
No 27
>PHA02857 monoglyceride lipase; Provisional
Probab=100.00 E-value=1.9e-32 Score=229.92 Aligned_cols=245 Identities=17% Similarity=0.277 Sum_probs=158.5
Q ss_pred hhceEEecCC---CceEEEEcCCCCChhhhhhhHHHhhc-CCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHH
Q 045774 14 ALNVRVVGQG---QSIIVFSHGFGSDQSVWSRVIPSFTR-AYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLD 89 (275)
Q Consensus 14 ~~~~~~~g~g---~~~ivllHG~~~~~~~w~~~~~~l~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~ 89 (275)
+++|+.+-++ ++.|+|+||+++++..|..+++.|++ +|+|+++|+||||.|++.. ....++..+++|+.+.++
T Consensus 12 ~l~~~~~~~~~~~~~~v~llHG~~~~~~~~~~~~~~l~~~g~~via~D~~G~G~S~~~~---~~~~~~~~~~~d~~~~l~ 88 (276)
T PHA02857 12 YIYCKYWKPITYPKALVFISHGAGEHSGRYEELAENISSLGILVFSHDHIGHGRSNGEK---MMIDDFGVYVRDVVQHVV 88 (276)
T ss_pred EEEEEeccCCCCCCEEEEEeCCCccccchHHHHHHHHHhCCCEEEEccCCCCCCCCCcc---CCcCCHHHHHHHHHHHHH
Confidence 4677766432 34577779999999999999999976 7999999999999996421 112356777888888776
Q ss_pred Hh----CCCceEEEEeChhHHHHHHHHHhCCccccceeeecCCCCCcCCCCCcCCCCcchHHHHHHHHhhhh--hhhhhh
Q 045774 90 AL----EIDRCAFVGHSVSAMIGLLAAIHRPNLFSRLILIGGSPRFTNDGNYIGGIDPAHMEEVFRRMESNY--ESWVAG 163 (275)
Q Consensus 90 ~l----~~~~~~lvGhS~GG~val~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 163 (275)
.+ ..++++|+||||||++|+.+|.++|++++++|++++.... . .... ...+........ ......
T Consensus 89 ~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~--~-----~~~~--~~~~~~~~~~~~~~~~~~~~ 159 (276)
T PHA02857 89 TIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNA--E-----AVPR--LNLLAAKLMGIFYPNKIVGK 159 (276)
T ss_pred HHHhhCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEecccccc--c-----cccH--HHHHHHHHHHHhCCCCccCC
Confidence 54 3468999999999999999999999999999999864321 0 0000 111111100000 000000
Q ss_pred hcccccCCCCChHHHHHHHHHhhcC----ChHHHHHHHHHHhhhchHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHHc
Q 045774 164 FVPMALGADVPDMALQEFSRTLFSM----RPDIALHVARTAFAADLRHVLGLVRVPVCIIQSSVDLSVPPAVAEYMRRHL 239 (275)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~d~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~ 239 (275)
+.+...... ......+....... ......... ....+....++++++|+++|+|++|.++|.+..+++.+.+
T Consensus 160 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~l~~~~ 235 (276)
T PHA02857 160 LCPESVSRD--MDEVYKYQYDPLVNHEKIKAGFASQVL--KATNKVRKIIPKIKTPILILQGTNNEISDVSGAYYFMQHA 235 (276)
T ss_pred CCHhhccCC--HHHHHHHhcCCCccCCCccHHHHHHHH--HHHHHHHHhcccCCCCEEEEecCCCCcCChHHHHHHHHHc
Confidence 000000000 01111111100000 001111111 1123455678899999999999999999999999998877
Q ss_pred CCCccEEEcCCCCCCCCCCCh---HHHHHHHHHHHHhh
Q 045774 240 GGPTVLEFLPTHGHLPHVSSP---APVANAIQQLLRRR 274 (275)
Q Consensus 240 ~~~~~~~~i~~~gH~~~~e~p---~~~~~~i~~fl~~~ 274 (275)
+...++++++++||+++.|+| +++.+.|.+||+++
T Consensus 236 ~~~~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 236 NCNREIKIYEGAKHHLHKETDEVKKSVMKEIETWIFNR 273 (276)
T ss_pred cCCceEEEeCCCcccccCCchhHHHHHHHHHHHHHHHh
Confidence 533688999999999999988 46889999999864
No 28
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=100.00 E-value=9.9e-33 Score=230.94 Aligned_cols=236 Identities=20% Similarity=0.298 Sum_probs=154.0
Q ss_pred CCceEEEEcCCCCChhhhhhhHHHhhc-CCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhC-CCceEEEE
Q 045774 23 GQSIIVFSHGFGSDQSVWSRVIPSFTR-AYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALE-IDRCAFVG 100 (275)
Q Consensus 23 g~~~ivllHG~~~~~~~w~~~~~~l~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~-~~~~~lvG 100 (275)
.+|+|||+||++.++..|+.++..|.+ +|+|+++|+||||.|.+.. ....+++++++++.+++++++ .++++|||
T Consensus 17 ~~p~vvliHG~~~~~~~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~---~~~~~~~~~~~~l~~~i~~l~~~~~v~lvG 93 (273)
T PLN02211 17 QPPHFVLIHGISGGSWCWYKIRCLMENSGYKVTCIDLKSAGIDQSDA---DSVTTFDEYNKPLIDFLSSLPENEKVILVG 93 (273)
T ss_pred CCCeEEEECCCCCCcCcHHHHHHHHHhCCCEEEEecccCCCCCCCCc---ccCCCHHHHHHHHHHHHHhcCCCCCEEEEE
Confidence 346899999999999999999999975 7999999999999874321 122479999999999999985 58999999
Q ss_pred eChhHHHHHHHHHhCCccccceeeecCCCCCcCCCCCcCCCCcchHHHHHHHHhhhhhhhhhhhcc-cccCC--CCCh-H
Q 045774 101 HSVSAMIGLLAAIHRPNLFSRLILIGGSPRFTNDGNYIGGIDPAHMEEVFRRMESNYESWVAGFVP-MALGA--DVPD-M 176 (275)
Q Consensus 101 hS~GG~val~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~-~ 176 (275)
|||||++++.++.++|++|+++|++++..... ++... ......... ...+...+.. ..... .... .
T Consensus 94 hS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~~-------g~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 163 (273)
T PLN02211 94 HSAGGLSVTQAIHRFPKKICLAVYVAATMLKL-------GFQTD--EDMKDGVPD-LSEFGDVYELGFGLGPDQPPTSAI 163 (273)
T ss_pred ECchHHHHHHHHHhChhheeEEEEeccccCCC-------CCCHH--HHHhccccc-hhhhccceeeeeccCCCCCCceee
Confidence 99999999999999999999999997643210 11100 000000000 0000000000 00000 0000 0
Q ss_pred HHHHHHH-HhhcCChHHHHHHHHH---------HhhhchHhhhCCC-CCcEEEEEeCCCCCCCHHHHHHHHHHcCCCccE
Q 045774 177 ALQEFSR-TLFSMRPDIALHVART---------AFAADLRHVLGLV-RVPVCIIQSSVDLSVPPAVAEYMRRHLGGPTVL 245 (275)
Q Consensus 177 ~~~~~~~-~~~~~~~~~~~~~~~~---------~~~~d~~~~l~~i-~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~ 245 (275)
....+.. .++...++........ +...+..+....+ ++|+++|+|++|..+|++.++.+.+.+++ .++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~l~I~g~~D~~ip~~~~~~m~~~~~~-~~~ 242 (273)
T PLN02211 164 IKKEFRRKILYQMSPQEDSTLAAMLLRPGPILALRSARFEEETGDIDKVPRVYIKTLHDHVVKPEQQEAMIKRWPP-SQV 242 (273)
T ss_pred eCHHHHHHHHhcCCCHHHHHHHHHhcCCcCccccccccccccccccCccceEEEEeCCCCCCCHHHHHHHHHhCCc-cEE
Confidence 0001111 1122222111111000 0111222223345 89999999999999999999999999887 478
Q ss_pred EEcCCCCCCCCCCChHHHHHHHHHHHHh
Q 045774 246 EFLPTHGHLPHVSSPAPVANAIQQLLRR 273 (275)
Q Consensus 246 ~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 273 (275)
+.++ +||++++|+|++++++|.++...
T Consensus 243 ~~l~-~gH~p~ls~P~~~~~~i~~~a~~ 269 (273)
T PLN02211 243 YELE-SDHSPFFSTPFLLFGLLIKAAAS 269 (273)
T ss_pred EEEC-CCCCccccCHHHHHHHHHHHHHH
Confidence 8886 99999999999999999998765
No 29
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=100.00 E-value=1.6e-32 Score=233.21 Aligned_cols=242 Identities=25% Similarity=0.418 Sum_probs=158.2
Q ss_pred CceEEEEcCCCCChhhhhhhHHHhhcC--CEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhCCCceEEEEe
Q 045774 24 QSIIVFSHGFGSDQSVWSRVIPSFTRA--YRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALEIDRCAFVGH 101 (275)
Q Consensus 24 ~~~ivllHG~~~~~~~w~~~~~~l~~~--~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGh 101 (275)
+++||++|||+++...|+.+++.|.+. ++|.|+|++|+|.|++.+. ...+++.++++.+..++...+.+++++|||
T Consensus 58 ~~pvlllHGF~~~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~--~~~y~~~~~v~~i~~~~~~~~~~~~~lvgh 135 (326)
T KOG1454|consen 58 KPPVLLLHGFGASSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPR--GPLYTLRELVELIRRFVKEVFVEPVSLVGH 135 (326)
T ss_pred CCcEEEeccccCCcccHhhhccccccccceEEEEEecCCCCcCCCCCC--CCceehhHHHHHHHHHHHhhcCcceEEEEe
Confidence 468999999999999999999999887 9999999999996544322 222579999999999999999999999999
Q ss_pred ChhHHHHHHHHHhCCccccceeeecCC-CCCcCCCCCcCCCCcchHHHHHHHHhhhhhhhh------------hhhcc--
Q 045774 102 SVSAMIGLLAAIHRPNLFSRLILIGGS-PRFTNDGNYIGGIDPAHMEEVFRRMESNYESWV------------AGFVP-- 166 (275)
Q Consensus 102 S~GG~val~~a~~~p~~v~~lvli~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~-- 166 (275)
||||++|+.+|+.+|+.|+++|+++-. +...... .................+.+. .....
T Consensus 136 S~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 210 (326)
T KOG1454|consen 136 SLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTP-----KGIKGLRRLLDKFLSALELLIPLSLTEPVRLVSEGLLRCL 210 (326)
T ss_pred CcHHHHHHHHHHhCcccccceeeecccccccccCC-----cchhHHHHhhhhhccHhhhcCccccccchhheeHhhhcce
Confidence 999999999999999999999966621 1111000 000000111110000001000 00000
Q ss_pred cccCCCCChHHHHHHHHHhhcC-----ChHHHHHHHHHHhh--hchHhhhCCCC-CcEEEEEeCCCCCCCHHHHHHHHHH
Q 045774 167 MALGADVPDMALQEFSRTLFSM-----RPDIALHVARTAFA--ADLRHVLGLVR-VPVCIIQSSVDLSVPPAVAEYMRRH 238 (275)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~--~d~~~~l~~i~-~P~l~i~G~~D~~~~~~~~~~~~~~ 238 (275)
.....+ .....+.....+... ..+........... ......++++. +|+++|+|++|..+|.+.++.+.+.
T Consensus 211 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pvlii~G~~D~~~p~~~~~~~~~~ 289 (326)
T KOG1454|consen 211 KVVYTD-PSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGFDENLLSLIKKIWKCPVLIIWGDKDQIVPLELAEELKKK 289 (326)
T ss_pred eeeccc-cccchhhhhhheecccccchhhhheeeEEEeccCccchHHHhhccccCCceEEEEcCcCCccCHHHHHHHHhh
Confidence 000000 000011111100000 00000000000011 22333456676 9999999999999999999999998
Q ss_pred cCCCccEEEcCCCCCCCCCCChHHHHHHHHHHHHhh
Q 045774 239 LGGPTVLEFLPTHGHLPHVSSPAPVANAIQQLLRRR 274 (275)
Q Consensus 239 ~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 274 (275)
+++ +++++|++|||.+|+|+|++++++|..|+.+.
T Consensus 290 ~pn-~~~~~I~~~gH~~h~e~Pe~~~~~i~~Fi~~~ 324 (326)
T KOG1454|consen 290 LPN-AELVEIPGAGHLPHLERPEEVAALLRSFIARL 324 (326)
T ss_pred CCC-ceEEEeCCCCcccccCCHHHHHHHHHHHHHHh
Confidence 887 68999999999999999999999999999864
No 30
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=100.00 E-value=6.2e-31 Score=220.49 Aligned_cols=251 Identities=18% Similarity=0.253 Sum_probs=154.1
Q ss_pred hceEEecC-C-CceEEEEcCCCC-ChhhhhhhHHHhhc-CCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHH
Q 045774 15 LNVRVVGQ-G-QSIIVFSHGFGS-DQSVWSRVIPSFTR-AYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDA 90 (275)
Q Consensus 15 ~~~~~~g~-g-~~~ivllHG~~~-~~~~w~~~~~~l~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~ 90 (275)
+.|+..+. + +++|||+||+++ +...|..+...+.+ +|+|+++|+||||.|+.... .....+++++++++.+++++
T Consensus 14 ~~~~~~~~~~~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~-~~~~~~~~~~~~~~~~~~~~ 92 (288)
T TIGR01250 14 HLFTKTGGEGEKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDD-SDELWTIDYFVDELEEVREK 92 (288)
T ss_pred EEEEeccCCCCCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCc-ccccccHHHHHHHHHHHHHH
Confidence 55665552 3 468999999754 45666777777776 79999999999999964211 11124799999999999999
Q ss_pred hCCCceEEEEeChhHHHHHHHHHhCCccccceeeecCCCCCcCCC----CCcCCCCcchHHHHHHHHhh----h---hhh
Q 045774 91 LEIDRCAFVGHSVSAMIGLLAAIHRPNLFSRLILIGGSPRFTNDG----NYIGGIDPAHMEEVFRRMES----N---YES 159 (275)
Q Consensus 91 l~~~~~~lvGhS~GG~val~~a~~~p~~v~~lvli~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~----~---~~~ 159 (275)
++.++++++||||||.+++.+|.++|++|+++|++++........ .....+... .......... . ...
T Consensus 93 ~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 171 (288)
T TIGR01250 93 LGLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDSAPEYVKELNRLRKELPPE-VRAAIKRCEASGDYDNPEYQE 171 (288)
T ss_pred cCCCcEEEEEeehHHHHHHHHHHhCccccceeeEecccccchHHHHHHHHHHhhcChh-HHHHHHHHHhccCcchHHHHH
Confidence 999999999999999999999999999999999987643110000 000000000 0000000000 0 000
Q ss_pred hhhhhcccc-cCCCCChHHHHHHHHHhhcCChHHHHH--------HHHHHhhhchHhhhCCCCCcEEEEEeCCCCCCCHH
Q 045774 160 WVAGFVPMA-LGADVPDMALQEFSRTLFSMRPDIALH--------VARTAFAADLRHVLGLVRVPVCIIQSSVDLSVPPA 230 (275)
Q Consensus 160 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~d~~~~l~~i~~P~l~i~G~~D~~~~~~ 230 (275)
....+.... ............+ ........... ........+....+.++++|+++++|++|.+ ++.
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~-~~~ 247 (288)
T TIGR01250 172 AVEVFYHHLLCRTRKWPEALKHL---KSGMNTNVYNIMQGPNEFTITGNLKDWDITDKLSEIKVPTLLTVGEFDTM-TPE 247 (288)
T ss_pred HHHHHHHHhhcccccchHHHHHH---hhccCHHHHhcccCCccccccccccccCHHHHhhccCCCEEEEecCCCcc-CHH
Confidence 000000000 0000000000000 00000000000 0000112244556788999999999999985 566
Q ss_pred HHHHHHHHcCCCccEEEcCCCCCCCCCCChHHHHHHHHHHHH
Q 045774 231 VAEYMRRHLGGPTVLEFLPTHGHLPHVSSPAPVANAIQQLLR 272 (275)
Q Consensus 231 ~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 272 (275)
..+.+.+.+++ .++++++++||++++|+|+++++.|.+|++
T Consensus 248 ~~~~~~~~~~~-~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 248 AAREMQELIAG-SRLVVFPDGSHMTMIEDPEVYFKLLSDFIR 288 (288)
T ss_pred HHHHHHHhccC-CeEEEeCCCCCCcccCCHHHHHHHHHHHhC
Confidence 77788888887 578889999999999999999999999984
No 31
>PRK10749 lysophospholipase L2; Provisional
Probab=100.00 E-value=7.7e-31 Score=225.52 Aligned_cols=255 Identities=14% Similarity=0.143 Sum_probs=163.1
Q ss_pred hhceEEecC--CCceEEEEcCCCCChhhhhhhHHHhh-cCCEEEEEccCCCCCCCCCCCC--cccccchhHHHHHHHHHH
Q 045774 14 ALNVRVVGQ--GQSIIVFSHGFGSDQSVWSRVIPSFT-RAYRVISFDLMCSGSCDPTNYD--FQRYATLDGYVDDLLSFL 88 (275)
Q Consensus 14 ~~~~~~~g~--g~~~ivllHG~~~~~~~w~~~~~~l~-~~~~via~Dl~G~G~S~~~~~~--~~~~~~~~~~a~dl~~~l 88 (275)
+++|..++. ++++|||+||++.+...|..++..|. .+|+|+++|+||||.|+....+ .....+++++++|+.+++
T Consensus 42 ~l~~~~~~~~~~~~~vll~HG~~~~~~~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~d~~~~~ 121 (330)
T PRK10749 42 PIRFVRFRAPHHDRVVVICPGRIESYVKYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHVERFNDYVDDLAAFW 121 (330)
T ss_pred EEEEEEccCCCCCcEEEEECCccchHHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCccccHHHHHHHHHHHH
Confidence 378887763 34589999999999999999987665 5799999999999999642111 111247999999999999
Q ss_pred HHh----CCCceEEEEeChhHHHHHHHHHhCCccccceeeecCCCCCcCCCCCcCCCCcchHHHHHHHHhhhhhh---h-
Q 045774 89 DAL----EIDRCAFVGHSVSAMIGLLAAIHRPNLFSRLILIGGSPRFTNDGNYIGGIDPAHMEEVFRRMESNYES---W- 160 (275)
Q Consensus 89 ~~l----~~~~~~lvGhS~GG~val~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~- 160 (275)
+++ +..+++++||||||++++.+|.++|++|+++|++++....... ........+.......... .
T Consensus 122 ~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~ 195 (330)
T PRK10749 122 QQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLP------LPSWMARRILNWAEGHPRIRDGYA 195 (330)
T ss_pred HHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCC------CCcHHHHHHHHHHHHhcCCCCcCC
Confidence 987 6679999999999999999999999999999999764321100 0111111111111100000 0
Q ss_pred --hhhhccccc-CCC--CChHHHHHHHHHhhcCChHH-----HHHHHHHHh--hhchHhhhCCCCCcEEEEEeCCCCCCC
Q 045774 161 --VAGFVPMAL-GAD--VPDMALQEFSRTLFSMRPDI-----ALHVARTAF--AADLRHVLGLVRVPVCIIQSSVDLSVP 228 (275)
Q Consensus 161 --~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~--~~d~~~~l~~i~~P~l~i~G~~D~~~~ 228 (275)
...+.+... ... ......+.+.+.+.. .+.. ......... ..+....+.++++|+|+|+|++|.+++
T Consensus 196 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~vv~ 274 (330)
T PRK10749 196 IGTGRWRPLPFAINVLTHSRERYRRNLRFYAD-DPELRVGGPTYHWVRESILAGEQVLAGAGDITTPLLLLQAEEERVVD 274 (330)
T ss_pred CCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHh-CCCcccCCCcHHHHHHHHHHHHHHHhhccCCCCCEEEEEeCCCeeeC
Confidence 000000000 000 011111222222211 1110 011111111 113345678899999999999999999
Q ss_pred HHHHHHHHHHcCC------CccEEEcCCCCCCCCCCCh---HHHHHHHHHHHHhhC
Q 045774 229 PAVAEYMRRHLGG------PTVLEFLPTHGHLPHVSSP---APVANAIQQLLRRRF 275 (275)
Q Consensus 229 ~~~~~~~~~~~~~------~~~~~~i~~~gH~~~~e~p---~~~~~~i~~fl~~~~ 275 (275)
.+..+.+.+.+++ .++++++++|||.++.|.+ +.+.+.|.+|+++++
T Consensus 275 ~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~fl~~~~ 330 (330)
T PRK10749 275 NRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIVDFFNRHN 330 (330)
T ss_pred HHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHHHHHhhcC
Confidence 9988888776632 1468999999999999997 568888999998753
No 32
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=100.00 E-value=3.3e-31 Score=217.06 Aligned_cols=242 Identities=22% Similarity=0.368 Sum_probs=157.5
Q ss_pred ceEEEEcCCCCChhhhhhhHHHhhcCCEEEEEccCCCCCCCCCCCCcccccchhHHHHH-HHHHHHHhCCCceEEEEeCh
Q 045774 25 SIIVFSHGFGSDQSVWSRVIPSFTRAYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDD-LLSFLDALEIDRCAFVGHSV 103 (275)
Q Consensus 25 ~~ivllHG~~~~~~~w~~~~~~l~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~d-l~~~l~~l~~~~~~lvGhS~ 103 (275)
++|||+||++++...|+.+++.|+++|+|+++|+||||.|+... . ....++++++++ +.++++.++.++++++||||
T Consensus 2 ~~vv~~hG~~~~~~~~~~~~~~L~~~~~v~~~d~~g~G~s~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~ 79 (251)
T TIGR03695 2 PVLVFLHGFLGSGADWQALIELLGPHFRCLAIDLPGHGSSQSPD-E-IERYDFEEAAQDILATLLDQLGIEPFFLVGYSM 79 (251)
T ss_pred CEEEEEcCCCCchhhHHHHHHHhcccCeEEEEcCCCCCCCCCCC-c-cChhhHHHHHHHHHHHHHHHcCCCeEEEEEecc
Confidence 57999999999999999999999988999999999999996321 1 123478999999 88888999889999999999
Q ss_pred hHHHHHHHHHhCCccccceeeecCCCCCcCCCCCcCCCCcchHHHHHHHHhh-hhhhhhhhhccc-ccCC--CCChHHHH
Q 045774 104 SAMIGLLAAIHRPNLFSRLILIGGSPRFTNDGNYIGGIDPAHMEEVFRRMES-NYESWVAGFVPM-ALGA--DVPDMALQ 179 (275)
Q Consensus 104 GG~val~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~--~~~~~~~~ 179 (275)
||.+++.+|.++|++|++++++++.+.............. .......+.. ....+...+... .+.. ..+....+
T Consensus 80 Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (251)
T TIGR03695 80 GGRIALYYALQYPERVQGLILESGSPGLATEEERAARRQN--DEQLAQRFEQEGLEAFLDDWYQQPLFASQKNLPPEQRQ 157 (251)
T ss_pred HHHHHHHHHHhCchheeeeEEecCCCCcCchHhhhhhhhc--chhhhhHHHhcCccHHHHHHhcCceeeecccCChHHhH
Confidence 9999999999999999999999875432211000000000 0000000100 001111111000 0000 01111122
Q ss_pred HHHHHhhcCChHHHHHHHHH---HhhhchHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHHcCCCccEEEcCCCCCCCC
Q 045774 180 EFSRTLFSMRPDIALHVART---AFAADLRHVLGLVRVPVCIIQSSVDLSVPPAVAEYMRRHLGGPTVLEFLPTHGHLPH 256 (275)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~---~~~~d~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~ 256 (275)
.+........+......... ....+..+.+.++++|+++|+|++|..++ ...+.+.+..++ .++++++++||+++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~-~~~~~~~~~~~~-~~~~~~~~~gH~~~ 235 (251)
T TIGR03695 158 ALRAKRLANNPEGLAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEKDEKFV-QIAKEMQKLLPN-LTLVIIANAGHNIH 235 (251)
T ss_pred HHHHhcccccchHHHHHHHHhhhhcccchHHHhhCCCCceEEEeeCcchHHH-HHHHHHHhcCCC-CcEEEEcCCCCCcC
Confidence 22222111111111111111 11234445678899999999999998764 456667777776 58888999999999
Q ss_pred CCChHHHHHHHHHHHH
Q 045774 257 VSSPAPVANAIQQLLR 272 (275)
Q Consensus 257 ~e~p~~~~~~i~~fl~ 272 (275)
+|+|+++++.|.+|+.
T Consensus 236 ~e~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 236 LENPEAFAKILLAFLE 251 (251)
T ss_pred ccChHHHHHHHHHHhC
Confidence 9999999999999973
No 33
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.98 E-value=1.5e-30 Score=228.64 Aligned_cols=249 Identities=17% Similarity=0.290 Sum_probs=152.2
Q ss_pred CceEEEEcCCCCChhhhhhhHHHhhcCCEEEEEccCCCCCCCCCCCCccc-ccchhHHHHHHHHHHHHhCCCceEEEEeC
Q 045774 24 QSIIVFSHGFGSDQSVWSRVIPSFTRAYRVISFDLMCSGSCDPTNYDFQR-YATLDGYVDDLLSFLDALEIDRCAFVGHS 102 (275)
Q Consensus 24 ~~~ivllHG~~~~~~~w~~~~~~l~~~~~via~Dl~G~G~S~~~~~~~~~-~~~~~~~a~dl~~~l~~l~~~~~~lvGhS 102 (275)
+|+|||+||++.+...|...++.|+++|+|+++|+||||.|+........ ....+.+++++.++++.+++++++|+|||
T Consensus 105 ~p~vvllHG~~~~~~~~~~~~~~L~~~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~lvGhS 184 (402)
T PLN02894 105 APTLVMVHGYGASQGFFFRNFDALASRFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKAKNLSNFILLGHS 184 (402)
T ss_pred CCEEEEECCCCcchhHHHHHHHHHHhCCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHcCCCCeEEEEEC
Confidence 36899999999999999999999998999999999999999642111000 01123467888899999999999999999
Q ss_pred hhHHHHHHHHHhCCccccceeeecCCCCCcCCCCC---cCCCCcchHHHHHHHHh----------hhh--------hhhh
Q 045774 103 VSAMIGLLAAIHRPNLFSRLILIGGSPRFTNDGNY---IGGIDPAHMEEVFRRME----------SNY--------ESWV 161 (275)
Q Consensus 103 ~GG~val~~a~~~p~~v~~lvli~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~----------~~~--------~~~~ 161 (275)
|||++++.+|.++|++|+++|++++.+........ ...........++..+. ... ..+.
T Consensus 185 ~GG~la~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gp~~~~l~~~~~ 264 (402)
T PLN02894 185 FGGYVAAKYALKHPEHVQHLILVGPAGFSSESDDKSEWLTKFRATWKGAVLNHLWESNFTPQKIIRGLGPWGPNLVRRYT 264 (402)
T ss_pred HHHHHHHHHHHhCchhhcEEEEECCccccCCcchhHHHHhhcchhHHHHHHHHHhhcCCCHHHHHHhccchhHHHHHHHH
Confidence 99999999999999999999999865422111000 00000000000000000 000 0000
Q ss_pred -hhhcccccCCCCCh---HHHHHHHHHhhcCCh--HHHHHHHH---HHhhhchHhhhCCCCCcEEEEEeCCCCCCCHHHH
Q 045774 162 -AGFVPMALGADVPD---MALQEFSRTLFSMRP--DIALHVAR---TAFAADLRHVLGLVRVPVCIIQSSVDLSVPPAVA 232 (275)
Q Consensus 162 -~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~--~~~~~~~~---~~~~~d~~~~l~~i~~P~l~i~G~~D~~~~~~~~ 232 (275)
..+........... ....++........+ ........ .....+....+.+|++|+++|+|++|.+.+.. .
T Consensus 265 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vP~liI~G~~D~i~~~~-~ 343 (402)
T PLN02894 265 TARFGAHSTGDILSEEESKLLTDYVYHTLAAKASGELCLKYIFSFGAFARKPLLESASEWKVPTTFIYGRHDWMNYEG-A 343 (402)
T ss_pred HHHhhhcccccccCcchhhHHHHHHHHhhcCCCchHHHHHHhccCchhhcchHhhhcccCCCCEEEEEeCCCCCCcHH-H
Confidence 00000000000010 111111111111111 11111110 01133455678889999999999999877644 4
Q ss_pred HHHHHHcCCCccEEEcCCCCCCCCCCChHHHHHHHHHHHHh
Q 045774 233 EYMRRHLGGPTVLEFLPTHGHLPHVSSPAPVANAIQQLLRR 273 (275)
Q Consensus 233 ~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 273 (275)
+.+.+.++...+++++++|||++++|+|++|+++|.+|++.
T Consensus 344 ~~~~~~~~~~~~~~~i~~aGH~~~~E~P~~f~~~l~~~~~~ 384 (402)
T PLN02894 344 VEARKRMKVPCEIIRVPQGGHFVFLDNPSGFHSAVLYACRK 384 (402)
T ss_pred HHHHHHcCCCCcEEEeCCCCCeeeccCHHHHHHHHHHHHHH
Confidence 44555554335789999999999999999999999988864
No 34
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.98 E-value=3e-30 Score=222.11 Aligned_cols=248 Identities=18% Similarity=0.266 Sum_probs=154.4
Q ss_pred hhceEEecC-----CCceEEEEcCCCCCh-hhhhhhHHHhhc-CCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHH
Q 045774 14 ALNVRVVGQ-----GQSIIVFSHGFGSDQ-SVWSRVIPSFTR-AYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLS 86 (275)
Q Consensus 14 ~~~~~~~g~-----g~~~ivllHG~~~~~-~~w~~~~~~l~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~ 86 (275)
+++|+.++. ..+.|||+||++.+. ..|..+...|.+ +|+|+++|+||||.|+... ....+++.+++|+.+
T Consensus 44 ~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~---~~~~~~~~~~~D~~~ 120 (330)
T PLN02298 44 SLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGLR---AYVPNVDLVVEDCLS 120 (330)
T ss_pred EEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCCCCCCCcc---ccCCCHHHHHHHHHH
Confidence 367766542 123699999998764 345666777765 7999999999999996321 112368999999999
Q ss_pred HHHHhCC------CceEEEEeChhHHHHHHHHHhCCccccceeeecCCCCCcCCCCCcCCCCcchHHHHHHHHhhhhhhh
Q 045774 87 FLDALEI------DRCAFVGHSVSAMIGLLAAIHRPNLFSRLILIGGSPRFTNDGNYIGGIDPAHMEEVFRRMESNYESW 160 (275)
Q Consensus 87 ~l~~l~~------~~~~lvGhS~GG~val~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (275)
+++.+.. .+++|+||||||++++.++.++|++|+++|++++....... ....+ ....+...+.. +
T Consensus 121 ~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~--~~~~~---~~~~~~~~~~~----~ 191 (330)
T PLN02298 121 FFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDK--IRPPW---PIPQILTFVAR----F 191 (330)
T ss_pred HHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCCcc--cCCch---HHHHHHHHHHH----H
Confidence 9998853 36999999999999999999999999999999865322110 00000 01111111110 1
Q ss_pred hhhhc--cc--ccCCCCChHHHHHHHHH-h--hcCChHHHHHHHHHHh-hhchHhhhCCCCCcEEEEEeCCCCCCCHHHH
Q 045774 161 VAGFV--PM--ALGADVPDMALQEFSRT-L--FSMRPDIALHVARTAF-AADLRHVLGLVRVPVCIIQSSVDLSVPPAVA 232 (275)
Q Consensus 161 ~~~~~--~~--~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~-~~d~~~~l~~i~~P~l~i~G~~D~~~~~~~~ 232 (275)
..... +. .............+... . +...+... ....... .......+.++++|+|+|+|++|.++|.+..
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~ivp~~~~ 270 (330)
T PLN02298 192 LPTLAIVPTADLLEKSVKVPAKKIIAKRNPMRYNGKPRLG-TVVELLRVTDYLGKKLKDVSIPFIVLHGSADVVTDPDVS 270 (330)
T ss_pred CCCCccccCCCcccccccCHHHHHHHHhCccccCCCccHH-HHHHHHHHHHHHHHhhhhcCCCEEEEecCCCCCCCHHHH
Confidence 00000 00 00000000001111110 0 00011000 0001111 1124556788999999999999999999999
Q ss_pred HHHHHHcCC-CccEEEcCCCCCCCCCCChHH----HHHHHHHHHHhh
Q 045774 233 EYMRRHLGG-PTVLEFLPTHGHLPHVSSPAP----VANAIQQLLRRR 274 (275)
Q Consensus 233 ~~~~~~~~~-~~~~~~i~~~gH~~~~e~p~~----~~~~i~~fl~~~ 274 (275)
+.+.+.++. .+++++++++||++++|+|+. +.+.|.+||.+.
T Consensus 271 ~~l~~~i~~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~ 317 (330)
T PLN02298 271 RALYEEAKSEDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNER 317 (330)
T ss_pred HHHHHHhccCCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHh
Confidence 988877752 258899999999999999965 566777888764
No 35
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.98 E-value=1.1e-30 Score=260.77 Aligned_cols=254 Identities=21% Similarity=0.321 Sum_probs=165.3
Q ss_pred ceEEecC--CCceEEEEcCCCCChhhhhhhHHHhhcCCEEEEEccCCCCCCCCCCCC----cccccchhHHHHHHHHHHH
Q 045774 16 NVRVVGQ--GQSIIVFSHGFGSDQSVWSRVIPSFTRAYRVISFDLMCSGSCDPTNYD----FQRYATLDGYVDDLLSFLD 89 (275)
Q Consensus 16 ~~~~~g~--g~~~ivllHG~~~~~~~w~~~~~~l~~~~~via~Dl~G~G~S~~~~~~----~~~~~~~~~~a~dl~~~l~ 89 (275)
+|+..|+ ++++|||+||++++...|..+++.|.++|+|+++|+||||.|+..... .....+++.+++++.++++
T Consensus 1361 ~~~~~G~~~~~~~vVllHG~~~s~~~w~~~~~~L~~~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~ 1440 (1655)
T PLN02980 1361 KVHEVGQNAEGSVVLFLHGFLGTGEDWIPIMKAISGSARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIE 1440 (1655)
T ss_pred EEEecCCCCCCCeEEEECCCCCCHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHH
Confidence 4445564 236899999999999999999999998999999999999999642110 0112479999999999999
Q ss_pred HhCCCceEEEEeChhHHHHHHHHHhCCccccceeeecCCCCCcCCCCCcCCCCcchHHHHHHHHhh-hhhhhhhhhcc-c
Q 045774 90 ALEIDRCAFVGHSVSAMIGLLAAIHRPNLFSRLILIGGSPRFTNDGNYIGGIDPAHMEEVFRRMES-NYESWVAGFVP-M 167 (275)
Q Consensus 90 ~l~~~~~~lvGhS~GG~val~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~ 167 (275)
+++.++++|+||||||++++.+|.++|++|+++|++++.+........ .+...........+.. ....+...+.. .
T Consensus 1441 ~l~~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~~~~~~--~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~ 1518 (1655)
T PLN02980 1441 HITPGKVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPGLKDEVAR--KIRSAKDDSRARMLIDHGLEIFLENWYSGE 1518 (1655)
T ss_pred HhCCCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCccCchHHH--HHHhhhhhHHHHHHHhhhHHHHHHHhccHH
Confidence 999999999999999999999999999999999999876532211000 0000000000000000 00011111100 0
Q ss_pred ccC-CCCChHHHHHHHH-HhhcCChHHHHHHHHHH---hhhchHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHHcCCC
Q 045774 168 ALG-ADVPDMALQEFSR-TLFSMRPDIALHVARTA---FAADLRHVLGLVRVPVCIIQSSVDLSVPPAVAEYMRRHLGGP 242 (275)
Q Consensus 168 ~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~d~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~ 242 (275)
... ...... .....+ .+..............+ ...+..+.++++++|+|+|+|++|..++ ...+++.+.+++.
T Consensus 1519 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dl~~~L~~I~~PtLlI~Ge~D~~~~-~~a~~~~~~i~~a 1596 (1655)
T PLN02980 1519 LWKSLRNHPH-FNKIVASRLLHKDVPSLAKLLSDLSIGRQPSLWEDLKQCDTPLLLVVGEKDVKFK-QIAQKMYREIGKS 1596 (1655)
T ss_pred HhhhhccCHH-HHHHHHHHHhcCCHHHHHHHHHHhhhcccchHHHHHhhCCCCEEEEEECCCCccH-HHHHHHHHHcccc
Confidence 000 000011 111111 11111111111111111 1234567789999999999999999875 5566677777652
Q ss_pred -----------ccEEEcCCCCCCCCCCChHHHHHHHHHHHHh
Q 045774 243 -----------TVLEFLPTHGHLPHVSSPAPVANAIQQLLRR 273 (275)
Q Consensus 243 -----------~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 273 (275)
.+++++++|||++++|+|+++++.|.+||.+
T Consensus 1597 ~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~f~~~I~~FL~~ 1638 (1655)
T PLN02980 1597 KESGNDKGKEIIEIVEIPNCGHAVHLENPLPVIRALRKFLTR 1638 (1655)
T ss_pred ccccccccccceEEEEECCCCCchHHHCHHHHHHHHHHHHHh
Confidence 3688999999999999999999999999986
No 36
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.97 E-value=3.2e-30 Score=212.20 Aligned_cols=249 Identities=15% Similarity=0.217 Sum_probs=156.3
Q ss_pred CCceEEEEcCCCCChhhhhhhHHHhhcCCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhCCCceEEEEeC
Q 045774 23 GQSIIVFSHGFGSDQSVWSRVIPSFTRAYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALEIDRCAFVGHS 102 (275)
Q Consensus 23 g~~~ivllHG~~~~~~~w~~~~~~l~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS 102 (275)
+..++|||||+|.+...|-.-++.|++.++|+|+|++|+|.|+....+...-.-.+.+++-+.++-.+.++++.+|||||
T Consensus 89 ~~~plVliHGyGAg~g~f~~Nf~~La~~~~vyaiDllG~G~SSRP~F~~d~~~~e~~fvesiE~WR~~~~L~KmilvGHS 168 (365)
T KOG4409|consen 89 NKTPLVLIHGYGAGLGLFFRNFDDLAKIRNVYAIDLLGFGRSSRPKFSIDPTTAEKEFVESIEQWRKKMGLEKMILVGHS 168 (365)
T ss_pred CCCcEEEEeccchhHHHHHHhhhhhhhcCceEEecccCCCCCCCCCCCCCcccchHHHHHHHHHHHHHcCCcceeEeecc
Confidence 44689999999999999999999999999999999999999975433322223457899999999999999999999999
Q ss_pred hhHHHHHHHHHhCCccccceeeecCCCCCcCC-CCCcCCCCcchHHHHH----------HHHh---hhhhhhhhhhcccc
Q 045774 103 VSAMIGLLAAIHRPNLFSRLILIGGSPRFTND-GNYIGGIDPAHMEEVF----------RRME---SNYESWVAGFVPMA 168 (275)
Q Consensus 103 ~GG~val~~a~~~p~~v~~lvli~~~~~~~~~-~~~~~~~~~~~~~~~~----------~~~~---~~~~~~~~~~~~~~ 168 (275)
+||++|..+|.+||+||++|+|+++.+..... ......-.+...-.+. ..++ .-..+...++.+..
T Consensus 169 fGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~~~~~~~~~~~~w~~~~~~~~~~~nPl~~LR~~Gp~Gp~Lv~~~~~d~ 248 (365)
T KOG4409|consen 169 FGGYLAAKYALKYPERVEKLILVSPWGFPEKPDSEPEFTKPPPEWYKALFLVATNFNPLALLRLMGPLGPKLVSRLRPDR 248 (365)
T ss_pred chHHHHHHHHHhChHhhceEEEecccccccCCCcchhhcCCChHHHhhhhhhhhcCCHHHHHHhccccchHHHhhhhHHH
Confidence 99999999999999999999999975421110 0000000011111100 0000 00011111111111
Q ss_pred cCCC---CChHHHHHHHHHhhcCChHHHHHHHHHHhh------hchHhhhCCC--CCcEEEEEeCCCCCCCHHHHHHHHH
Q 045774 169 LGAD---VPDMALQEFSRTLFSMRPDIALHVARTAFA------ADLRHVLGLV--RVPVCIIQSSVDLSVPPAVAEYMRR 237 (275)
Q Consensus 169 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~d~~~~l~~i--~~P~l~i~G~~D~~~~~~~~~~~~~ 237 (275)
+..- .++..+-++.-.....++. .+...+.++. ..+...+..+ +||+++|+|++|.+ ......++.+
T Consensus 249 ~~k~~~~~~ed~l~~YiY~~n~~~ps-gE~~fk~l~~~~g~Ar~Pm~~r~~~l~~~~pv~fiyG~~dWm-D~~~g~~~~~ 326 (365)
T KOG4409|consen 249 FRKFPSLIEEDFLHEYIYHCNAQNPS-GETAFKNLFEPGGWARRPMIQRLRELKKDVPVTFIYGDRDWM-DKNAGLEVTK 326 (365)
T ss_pred HHhccccchhHHHHHHHHHhcCCCCc-HHHHHHHHHhccchhhhhHHHHHHhhccCCCEEEEecCcccc-cchhHHHHHH
Confidence 1110 0111111221111112221 1112222211 1223344444 59999999999964 4444455555
Q ss_pred HcC-CCccEEEcCCCCCCCCCCChHHHHHHHHHHHHh
Q 045774 238 HLG-GPTVLEFLPTHGHLPHVSSPAPVANAIQQLLRR 273 (275)
Q Consensus 238 ~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 273 (275)
.+. ..++.++|++|||.+.+++|+.|++.+.+++++
T Consensus 327 ~~~~~~~~~~~v~~aGHhvylDnp~~Fn~~v~~~~~~ 363 (365)
T KOG4409|consen 327 SLMKEYVEIIIVPGAGHHVYLDNPEFFNQIVLEECDK 363 (365)
T ss_pred HhhcccceEEEecCCCceeecCCHHHHHHHHHHHHhc
Confidence 432 225788899999999999999999999999864
No 37
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.97 E-value=4.1e-30 Score=224.52 Aligned_cols=242 Identities=26% Similarity=0.372 Sum_probs=159.2
Q ss_pred hceEEecCC-CceEEEEcCCCCChhhhhhhHHHhhcCCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhCC
Q 045774 15 LNVRVVGQG-QSIIVFSHGFGSDQSVWSRVIPSFTRAYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALEI 93 (275)
Q Consensus 15 ~~~~~~g~g-~~~ivllHG~~~~~~~w~~~~~~l~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~ 93 (275)
++|...|++ .++|||+||++++...|..+.+.|.+.|+|+++|+||||.|.... . ..+++++++++.+++++++.
T Consensus 121 i~~~~~g~~~~~~vl~~HG~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~---~-~~~~~~~~~~~~~~~~~~~~ 196 (371)
T PRK14875 121 VRYLRLGEGDGTPVVLIHGFGGDLNNWLFNHAALAAGRPVIALDLPGHGASSKAV---G-AGSLDELAAAVLAFLDALGI 196 (371)
T ss_pred EEEecccCCCCCeEEEECCCCCccchHHHHHHHHhcCCEEEEEcCCCCCCCCCCC---C-CCCHHHHHHHHHHHHHhcCC
Confidence 566666653 468999999999999999999999989999999999999985321 1 24799999999999999999
Q ss_pred CceEEEEeChhHHHHHHHHHhCCccccceeeecCCCCCcCC-CCCcCCCCcchHHHHHHHHhhhhhhhhhhhcccccCCC
Q 045774 94 DRCAFVGHSVSAMIGLLAAIHRPNLFSRLILIGGSPRFTND-GNYIGGIDPAHMEEVFRRMESNYESWVAGFVPMALGAD 172 (275)
Q Consensus 94 ~~~~lvGhS~GG~val~~a~~~p~~v~~lvli~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (275)
++++|+||||||++++.+|.++|++++++|++++....... ..+...+....... ....+....... ...
T Consensus 197 ~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~--~~~ 267 (371)
T PRK14875 197 ERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGPEINGDYIDGFVAAESRR-------ELKPVLELLFAD--PAL 267 (371)
T ss_pred ccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCcccchhHHHHhhcccchh-------HHHHHHHHHhcC--hhh
Confidence 99999999999999999999999999999999764321100 00000000000000 000111000000 000
Q ss_pred CChHHHHHHHHHhhcCC-hHHHHHHHHHH-----hhhchHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHHcCCCccEE
Q 045774 173 VPDMALQEFSRTLFSMR-PDIALHVARTA-----FAADLRHVLGLVRVPVCIIQSSVDLSVPPAVAEYMRRHLGGPTVLE 246 (275)
Q Consensus 173 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-----~~~d~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~ 246 (275)
................. ........... ...++...+.++++|+++|+|++|..+|.+..+.+ ....+++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~vp~~~~~~l----~~~~~~~ 343 (371)
T PRK14875 268 VTRQMVEDLLKYKRLDGVDDALRALADALFAGGRQRVDLRDRLASLAIPVLVIWGEQDRIIPAAHAQGL----PDGVAVH 343 (371)
T ss_pred CCHHHHHHHHHHhccccHHHHHHHHHHHhccCcccchhHHHHHhcCCCCEEEEEECCCCccCHHHHhhc----cCCCeEE
Confidence 01111111111100000 00001111111 11344556778999999999999999998765433 3335788
Q ss_pred EcCCCCCCCCCCChHHHHHHHHHHHHh
Q 045774 247 FLPTHGHLPHVSSPAPVANAIQQLLRR 273 (275)
Q Consensus 247 ~i~~~gH~~~~e~p~~~~~~i~~fl~~ 273 (275)
+++++||++++|+|+++++.|.+|+++
T Consensus 344 ~~~~~gH~~~~e~p~~~~~~i~~fl~~ 370 (371)
T PRK14875 344 VLPGAGHMPQMEAAADVNRLLAEFLGK 370 (371)
T ss_pred EeCCCCCChhhhCHHHHHHHHHHHhcc
Confidence 999999999999999999999999964
No 38
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.97 E-value=8.5e-29 Score=215.34 Aligned_cols=260 Identities=23% Similarity=0.317 Sum_probs=168.2
Q ss_pred hhceEEecC----CCceEEEEcCCCCCh-------------hhhhhhHH---Hh-hcCCEEEEEccCCCCCCC-------
Q 045774 14 ALNVRVVGQ----GQSIIVFSHGFGSDQ-------------SVWSRVIP---SF-TRAYRVISFDLMCSGSCD------- 65 (275)
Q Consensus 14 ~~~~~~~g~----g~~~ivllHG~~~~~-------------~~w~~~~~---~l-~~~~~via~Dl~G~G~S~------- 65 (275)
++.|+++|+ +.+.||++|++++++ .+|+.++- .| .++|.||++|..|-|.|+
T Consensus 42 ~~~Y~t~G~ln~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~g~t 121 (389)
T PRK06765 42 QMGYETYGTLNRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNVITT 121 (389)
T ss_pred eEEEEeccccCCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCCCCC
Confidence 488999985 345899999998854 45888764 24 347999999999876531
Q ss_pred -CC--CC--------CcccccchhHHHHHHHHHHHHhCCCceE-EEEeChhHHHHHHHHHhCCccccceeeecCCCCCcC
Q 045774 66 -PT--NY--------DFQRYATLDGYVDDLLSFLDALEIDRCA-FVGHSVSAMIGLLAAIHRPNLFSRLILIGGSPRFTN 133 (275)
Q Consensus 66 -~~--~~--------~~~~~~~~~~~a~dl~~~l~~l~~~~~~-lvGhS~GG~val~~a~~~p~~v~~lvli~~~~~~~~ 133 (275)
|. ++ +.+. .|++++++++.++++++++++++ +|||||||++++++|.+||++|+++|++++.++...
T Consensus 122 gp~s~~p~tg~~~~~~fP~-~t~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~~~~~~~ 200 (389)
T PRK06765 122 GPASINPKTGKPYGMDFPV-VTILDFVRVQKELIKSLGIARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIGNPQNDA 200 (389)
T ss_pred CCCCCCcCCCCccCCCCCc-CcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEecCCCCCh
Confidence 10 00 1222 47999999999999999999986 999999999999999999999999999987653211
Q ss_pred ----------------CCCCcCC-C----CcchHHHHHHHH---h-hhhhhhhhhhcccc-cCCC-----CChHHHHHHH
Q 045774 134 ----------------DGNYIGG-I----DPAHMEEVFRRM---E-SNYESWVAGFVPMA-LGAD-----VPDMALQEFS 182 (275)
Q Consensus 134 ----------------~~~~~~~-~----~~~~~~~~~~~~---~-~~~~~~~~~~~~~~-~~~~-----~~~~~~~~~~ 182 (275)
++.+..+ + .+.........+ . ...+.+..++.... .... ......+.+.
T Consensus 201 ~~~~~~~~~~~~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~~~~~~~~~~~~~~~~e~yl 280 (389)
T PRK06765 201 WTSVNVLQNWAEAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPRNASIEVDPYEKVSTLTSFEKEI 280 (389)
T ss_pred hHHHHHHHHHHHHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCccccccccccccchhhHHHHH
Confidence 1111110 0 011111111111 0 11111112222110 0000 0001122222
Q ss_pred H----H-hhcCChHHHHHHHHHHhhh-------chHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHHcCC---CccEEE
Q 045774 183 R----T-LFSMRPDIALHVARTAFAA-------DLRHVLGLVRVPVCIIQSSVDLSVPPAVAEYMRRHLGG---PTVLEF 247 (275)
Q Consensus 183 ~----~-~~~~~~~~~~~~~~~~~~~-------d~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~---~~~~~~ 247 (275)
+ . ....++.......+.+... +..+.+.+|++|+++|+|++|.++|++..+++++.+++ .+++++
T Consensus 281 ~~~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~~~a~l~~ 360 (389)
T PRK06765 281 NKATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQPPRYNYKMVDILQKQGKYAEVYE 360 (389)
T ss_pred HHHHHHhhhccChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHHhhhcCCCeEEEE
Confidence 1 1 1122333333333332222 46778889999999999999999999999989988863 257888
Q ss_pred cCC-CCCCCCCCChHHHHHHHHHHHHhh
Q 045774 248 LPT-HGHLPHVSSPAPVANAIQQLLRRR 274 (275)
Q Consensus 248 i~~-~gH~~~~e~p~~~~~~i~~fl~~~ 274 (275)
+++ +||++++|+|+++++.|++||++.
T Consensus 361 I~s~~GH~~~le~p~~~~~~I~~FL~~~ 388 (389)
T PRK06765 361 IESINGHMAGVFDIHLFEKKIYEFLNRK 388 (389)
T ss_pred ECCCCCcchhhcCHHHHHHHHHHHHccc
Confidence 885 999999999999999999999764
No 39
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.97 E-value=1.1e-28 Score=210.17 Aligned_cols=253 Identities=21% Similarity=0.276 Sum_probs=149.2
Q ss_pred hhceEEecC-CCceEEEEcCCCCChhhhhhhHHHh-hcCCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHh
Q 045774 14 ALNVRVVGQ-GQSIIVFSHGFGSDQSVWSRVIPSF-TRAYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDAL 91 (275)
Q Consensus 14 ~~~~~~~g~-g~~~ivllHG~~~~~~~w~~~~~~l-~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l 91 (275)
+++|...|+ +.++|||+||++++...| .+...+ .++|+|+++|+||||.|++... ... .+++++++|+..+++++
T Consensus 16 ~l~y~~~g~~~~~~lvllHG~~~~~~~~-~~~~~~~~~~~~vi~~D~~G~G~S~~~~~-~~~-~~~~~~~~dl~~l~~~l 92 (306)
T TIGR01249 16 QLYYEQSGNPDGKPVVFLHGGPGSGTDP-GCRRFFDPETYRIVLFDQRGCGKSTPHAC-LEE-NTTWDLVADIEKLREKL 92 (306)
T ss_pred EEEEEECcCCCCCEEEEECCCCCCCCCH-HHHhccCccCCEEEEECCCCCCCCCCCCC-ccc-CCHHHHHHHHHHHHHHc
Confidence 478888875 235799999988776544 333344 3579999999999999974311 112 35889999999999999
Q ss_pred CCCceEEEEeChhHHHHHHHHHhCCccccceeeecCCCCCcCCCCCc--CC---CCcchHHHHHHHHhhhh--hhhhhhh
Q 045774 92 EIDRCAFVGHSVSAMIGLLAAIHRPNLFSRLILIGGSPRFTNDGNYI--GG---IDPAHMEEVFRRMESNY--ESWVAGF 164 (275)
Q Consensus 92 ~~~~~~lvGhS~GG~val~~a~~~p~~v~~lvli~~~~~~~~~~~~~--~~---~~~~~~~~~~~~~~~~~--~~~~~~~ 164 (275)
++++++++||||||++++.++.++|++|+++|++++.........+. .+ +.+..+..+...+.... ..+...+
T Consensus 93 ~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (306)
T TIGR01249 93 GIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFLLREKEWSWFYEGGASMIYPDAWQRFMDSIPENERNEQLVNAY 172 (306)
T ss_pred CCCCEEEEEECHHHHHHHHHHHHChHhhhhheeeccccCCHHHHHHHHhcchhhhCHHHHHHHhhhCChhhhhccHHHHH
Confidence 99999999999999999999999999999999998643211000000 00 00000111110000000 1111111
Q ss_pred cccccCCCCCh-HHH-HHH---H-HHhhcC---------ChHHHHHHHHH----H----hh---hchHhhhCCC-CCcEE
Q 045774 165 VPMALGADVPD-MAL-QEF---S-RTLFSM---------RPDIALHVART----A----FA---ADLRHVLGLV-RVPVC 217 (275)
Q Consensus 165 ~~~~~~~~~~~-~~~-~~~---~-~~~~~~---------~~~~~~~~~~~----~----~~---~d~~~~l~~i-~~P~l 217 (275)
........... ... +.+ . ..+... ++......... . +. .+....+.++ ++|++
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~l 252 (306)
T TIGR01249 173 HDRLQSGDEETKLAAAKAWVDWESTTLLRPINEIVSTAEDFKFSLAFARLENHYFVNKGFLDVENFILDNISKIRNIPTY 252 (306)
T ss_pred HHHccCCCHHHHHHHHHHHHHHhChhhcCCCCCccccccchHHHHHHHHHHHhHHHHhchhcCchHHHHhhhhccCCCeE
Confidence 11111111000 000 000 0 001100 01111110000 0 00 1133455667 69999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHcCCCccEEEcCCCCCCCCCCChHHHHHHHHHHHHh
Q 045774 218 IIQSSVDLSVPPAVAEYMRRHLGGPTVLEFLPTHGHLPHVSSPAPVANAIQQLLRR 273 (275)
Q Consensus 218 ~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 273 (275)
+|+|++|.++|.+..+.+++.+++ +++++++++||+++ .|+ ..+.|.+++..
T Consensus 253 ii~g~~D~~~p~~~~~~~~~~~~~-~~~~~~~~~gH~~~--~~~-~~~~i~~~~~~ 304 (306)
T TIGR01249 253 IVHGRYDLCCPLQSAWALHKAFPE-AELKVTNNAGHSAF--DPN-NLAALVHALET 304 (306)
T ss_pred EEecCCCCCCCHHHHHHHHHhCCC-CEEEEECCCCCCCC--ChH-HHHHHHHHHHH
Confidence 999999999999999999999987 58888999999986 334 34555555544
No 40
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.96 E-value=2.8e-29 Score=190.65 Aligned_cols=243 Identities=16% Similarity=0.229 Sum_probs=172.0
Q ss_pred hhhceEEecCCCceEEEEcC-CCCChhhhhhhHHHhhc--CCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHH
Q 045774 13 EALNVRVVGQGQSIIVFSHG-FGSDQSVWSRVIPSFTR--AYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLD 89 (275)
Q Consensus 13 ~~~~~~~~g~g~~~ivllHG-~~~~~~~w~~~~~~l~~--~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~ 89 (275)
.+++|...|+|+..||+++| +|+....|.+++..|.+ +++|+++|-||+|.|.|....+.. ..+..-+++..++++
T Consensus 31 ~ql~y~~~G~G~~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~-~ff~~Da~~avdLM~ 109 (277)
T KOG2984|consen 31 TQLGYCKYGHGPNYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEV-QFFMKDAEYAVDLME 109 (277)
T ss_pred ceeeeeecCCCCceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCcccchH-HHHHHhHHHHHHHHH
Confidence 46899999999888999999 67778999998877655 599999999999999764322221 246777888999999
Q ss_pred HhCCCceEEEEeChhHHHHHHHHHhCCccccceeeecCCCCCcCCCCCcCCCCcchHHHHHHHHhhhhhhhhhhhccccc
Q 045774 90 ALEIDRCAFVGHSVSAMIGLLAAIHRPNLFSRLILIGGSPRFTNDGNYIGGIDPAHMEEVFRRMESNYESWVAGFVPMAL 169 (275)
Q Consensus 90 ~l~~~~~~lvGhS~GG~val~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (275)
+|..+++.+.|||-||..++..|+++++.|.++++.++........ ..+++.++ +..+|..+....+
T Consensus 110 aLk~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~-----------~ma~kgiR-dv~kWs~r~R~P~- 176 (277)
T KOG2984|consen 110 ALKLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLG-----------AMAFKGIR-DVNKWSARGRQPY- 176 (277)
T ss_pred HhCCCCeeEeeecCCCeEEEEeeccChhhhhhheeecccceecchh-----------HHHHhchH-HHhhhhhhhcchH-
Confidence 9999999999999999999999999999999999987654221100 01112221 1223332211000
Q ss_pred CCCCChHHHHHHHHHhhcCChHHHHHHHHHHhhhchHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHHcCCCccEEEcC
Q 045774 170 GADVPDMALQEFSRTLFSMRPDIALHVARTAFAADLRHVLGLVRVPVCIIQSSVDLSVPPAVAEYMRRHLGGPTVLEFLP 249 (275)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~ 249 (275)
..-+ ..+.+.++.... -+............-++..+++++||+++++|..|+.++....-.+..+.+. +++++.|
T Consensus 177 e~~Y---g~e~f~~~wa~w-vD~v~qf~~~~dG~fCr~~lp~vkcPtli~hG~kDp~~~~~hv~fi~~~~~~-a~~~~~p 251 (277)
T KOG2984|consen 177 EDHY---GPETFRTQWAAW-VDVVDQFHSFCDGRFCRLVLPQVKCPTLIMHGGKDPFCGDPHVCFIPVLKSL-AKVEIHP 251 (277)
T ss_pred HHhc---CHHHHHHHHHHH-HHHHHHHhhcCCCchHhhhcccccCCeeEeeCCcCCCCCCCCccchhhhccc-ceEEEcc
Confidence 0000 012222211100 0111111100011126788999999999999999999998888888888887 6899999
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHhh
Q 045774 250 THGHLPHVSSPAPVANAIQQLLRRR 274 (275)
Q Consensus 250 ~~gH~~~~e~p~~~~~~i~~fl~~~ 274 (275)
.++|..|+-.+++|++.+.+||+.+
T Consensus 252 eGkHn~hLrya~eFnklv~dFl~~~ 276 (277)
T KOG2984|consen 252 EGKHNFHLRYAKEFNKLVLDFLKST 276 (277)
T ss_pred CCCcceeeechHHHHHHHHHHHhcc
Confidence 9999999999999999999999875
No 41
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.96 E-value=3.3e-28 Score=212.42 Aligned_cols=248 Identities=17% Similarity=0.219 Sum_probs=156.3
Q ss_pred hhceEEecC----CCceEEEEcCCCCChhhhhhhHHHhhc-CCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHH
Q 045774 14 ALNVRVVGQ----GQSIIVFSHGFGSDQSVWSRVIPSFTR-AYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFL 88 (275)
Q Consensus 14 ~~~~~~~g~----g~~~ivllHG~~~~~~~w~~~~~~l~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l 88 (275)
.++++.+.+ ..++|||+||++++...|..+++.|.+ +|+|+++|+||||.|+... ....+++.+++|+.+++
T Consensus 122 ~l~~~~~~p~~~~~~~~Vl~lHG~~~~~~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~---~~~~~~~~~~~Dl~~~l 198 (395)
T PLN02652 122 ALFCRSWAPAAGEMRGILIIIHGLNEHSGRYLHFAKQLTSCGFGVYAMDWIGHGGSDGLH---GYVPSLDYVVEDTEAFL 198 (395)
T ss_pred EEEEEEecCCCCCCceEEEEECCchHHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC---CCCcCHHHHHHHHHHHH
Confidence 355666533 335899999999999999999999975 7999999999999996421 11236889999999999
Q ss_pred HHhCC----CceEEEEeChhHHHHHHHHHhCCc---cccceeeecCCCCCcCCCCCcCCCCcchHHHHHHHHhhh-hhhh
Q 045774 89 DALEI----DRCAFVGHSVSAMIGLLAAIHRPN---LFSRLILIGGSPRFTNDGNYIGGIDPAHMEEVFRRMESN-YESW 160 (275)
Q Consensus 89 ~~l~~----~~~~lvGhS~GG~val~~a~~~p~---~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 160 (275)
+.+.. .+++++||||||.+++.++. +|+ +++++|+.++...... . ......+..+... ...+
T Consensus 199 ~~l~~~~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~------~---~~~~~~~~~l~~~~~p~~ 268 (395)
T PLN02652 199 EKIRSENPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKP------A---HPIVGAVAPIFSLVAPRF 268 (395)
T ss_pred HHHHHhCCCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECccccccc------c---hHHHHHHHHHHHHhCCCC
Confidence 98753 36999999999999998764 664 8999999865422110 0 0011111111000 0000
Q ss_pred -hhhhcccccCCCCChHHHHHHHHHhhcCChHHHHHHHHHH--hhhchHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHH
Q 045774 161 -VAGFVPMALGADVPDMALQEFSRTLFSMRPDIALHVARTA--FAADLRHVLGLVRVPVCIIQSSVDLSVPPAVAEYMRR 237 (275)
Q Consensus 161 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~d~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~ 237 (275)
........................................ ...+....+.+|++|+|+|+|++|.++|.+.++++.+
T Consensus 269 ~~~~~~~~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~L~~I~vPvLIi~G~~D~vvp~~~a~~l~~ 348 (395)
T PLN02652 269 QFKGANKRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLTRNFKSVTVPFMVLHGTADRVTDPLASQDLYN 348 (395)
T ss_pred cccCcccccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHHHHHHhhcccCCCCEEEEEeCCCCCCCHHHHHHHHH
Confidence 0000000000000111111111000000000000111111 1123456678899999999999999999999888888
Q ss_pred HcCCC-ccEEEcCCCCCCCCCC-ChHHHHHHHHHHHHhh
Q 045774 238 HLGGP-TVLEFLPTHGHLPHVS-SPAPVANAIQQLLRRR 274 (275)
Q Consensus 238 ~~~~~-~~~~~i~~~gH~~~~e-~p~~~~~~i~~fl~~~ 274 (275)
.+++. ++++++++++|.++.| +|+++.+.|.+||.++
T Consensus 349 ~~~~~~k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~~~ 387 (395)
T PLN02652 349 EAASRHKDIKLYDGFLHDLLFEPEREEVGRDIIDWMEKR 387 (395)
T ss_pred hcCCCCceEEEECCCeEEeccCCCHHHHHHHHHHHHHHH
Confidence 76542 5788999999999888 7999999999999865
No 42
>PRK05855 short chain dehydrogenase; Validated
Probab=99.96 E-value=9.7e-29 Score=227.86 Aligned_cols=254 Identities=19% Similarity=0.280 Sum_probs=152.8
Q ss_pred hhceEEecC-CCceEEEEcCCCCChhhhhhhHHHhhcCCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhC
Q 045774 14 ALNVRVVGQ-GQSIIVFSHGFGSDQSVWSRVIPSFTRAYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALE 92 (275)
Q Consensus 14 ~~~~~~~g~-g~~~ivllHG~~~~~~~w~~~~~~l~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~ 92 (275)
+++|+.+|+ +.++|||+||+++++..|+.+++.|+++|+|+++|+||||.|+.... ... ++++++++|+.+++++++
T Consensus 14 ~l~~~~~g~~~~~~ivllHG~~~~~~~w~~~~~~L~~~~~Vi~~D~~G~G~S~~~~~-~~~-~~~~~~a~dl~~~i~~l~ 91 (582)
T PRK05855 14 RLAVYEWGDPDRPTVVLVHGYPDNHEVWDGVAPLLADRFRVVAYDVRGAGRSSAPKR-TAA-YTLARLADDFAAVIDAVS 91 (582)
T ss_pred EEEEEEcCCCCCCeEEEEcCCCchHHHHHHHHHHhhcceEEEEecCCCCCCCCCCCc-ccc-cCHHHHHHHHHHHHHHhC
Confidence 477888875 34689999999999999999999998899999999999999964221 122 479999999999999998
Q ss_pred CCc-eEEEEeChhHHHHHHHHHh--CCccccceeeecCCCCCcCCCCCc-CC---CCcchHHHHHHHHhhhh-hhhhh--
Q 045774 93 IDR-CAFVGHSVSAMIGLLAAIH--RPNLFSRLILIGGSPRFTNDGNYI-GG---IDPAHMEEVFRRMESNY-ESWVA-- 162 (275)
Q Consensus 93 ~~~-~~lvGhS~GG~val~~a~~--~p~~v~~lvli~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~-~~~~~-- 162 (275)
.++ ++|+||||||++++.++.+ .|+++..++.+++... .....+. .. ............+.... .....
T Consensus 92 ~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (582)
T PRK05855 92 PDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGPSL-DHVGFWLRSGLRRPTPRRLARALGQLLRSWYIYLFHLP 170 (582)
T ss_pred CCCcEEEEecChHHHHHHHHHhCccchhhhhhheeccCCch-HHHHHHHhhcccccchhhhhHHHHHHhhhHHHHHHhCC
Confidence 766 9999999999999988766 2445555554433210 0000000 00 00011111111000000 00000
Q ss_pred hhcccccCCCCChHHHHHHHHHhhcCChH-------------HHHHHHHHHhhhchHhhhCCCCCcEEEEEeCCCCCCCH
Q 045774 163 GFVPMALGADVPDMALQEFSRTLFSMRPD-------------IALHVARTAFAADLRHVLGLVRVPVCIIQSSVDLSVPP 229 (275)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~d~~~~l~~i~~P~l~i~G~~D~~~~~ 229 (275)
.+............ .....+........ .................+..+++|+++|+|++|.++|.
T Consensus 171 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~v~~ 249 (582)
T PRK05855 171 VLPELLWRLGLGRA-WPRLLRRVEGTPVDPIPTQTTLSDGAHGVKLYRANMIRSLSRPRERYTDVPVQLIVPTGDPYVRP 249 (582)
T ss_pred CCcHHHhccchhhH-HHHhhhhccCCCcchhhhhhhhccccchHHHHHhhhhhhhccCccCCccCceEEEEeCCCcccCH
Confidence 00000000000000 00000000000000 00000000011111223456899999999999999999
Q ss_pred HHHHHHHHHcCCCccEEEcCCCCCCCCCCChHHHHHHHHHHHHh
Q 045774 230 AVAEYMRRHLGGPTVLEFLPTHGHLPHVSSPAPVANAIQQLLRR 273 (275)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 273 (275)
+..+.+++.+++ ..+++++ +||++++|+|+++++.|.+|+.+
T Consensus 250 ~~~~~~~~~~~~-~~~~~~~-~gH~~~~e~p~~~~~~i~~fl~~ 291 (582)
T PRK05855 250 ALYDDLSRWVPR-LWRREIK-AGHWLPMSHPQVLAAAVAEFVDA 291 (582)
T ss_pred HHhccccccCCc-ceEEEcc-CCCcchhhChhHHHHHHHHHHHh
Confidence 998888888876 4676665 89999999999999999999975
No 43
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.95 E-value=9.1e-27 Score=191.38 Aligned_cols=233 Identities=19% Similarity=0.286 Sum_probs=159.9
Q ss_pred CceEEEEcCCCCChhhhhhhHHHhhc--CCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhC----CCceE
Q 045774 24 QSIIVFSHGFGSDQSVWSRVIPSFTR--AYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALE----IDRCA 97 (275)
Q Consensus 24 ~~~ivllHG~~~~~~~w~~~~~~l~~--~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~----~~~~~ 97 (275)
.|+++++||+.++.+.|+.+...|+. +..|+++|+|-||.|.... ..+...+++|+..+++..+ ..+++
T Consensus 52 ~Pp~i~lHGl~GS~~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~-----~h~~~~ma~dv~~Fi~~v~~~~~~~~~~ 126 (315)
T KOG2382|consen 52 APPAIILHGLLGSKENWRSVAKNLSRKLGRDVYAVDVRNHGSSPKIT-----VHNYEAMAEDVKLFIDGVGGSTRLDPVV 126 (315)
T ss_pred CCceEEecccccCCCCHHHHHHHhcccccCceEEEecccCCCCcccc-----ccCHHHHHHHHHHHHHHcccccccCCce
Confidence 47899999999999999999999987 4799999999999996421 2357899999999999885 56899
Q ss_pred EEEeChhH-HHHHHHHHhCCccccceeeecCCCCCcCCCCCcCCCCcchHHHHHHHHhhhhh---------hhhhhhccc
Q 045774 98 FVGHSVSA-MIGLLAAIHRPNLFSRLILIGGSPRFTNDGNYIGGIDPAHMEEVFRRMESNYE---------SWVAGFVPM 167 (275)
Q Consensus 98 lvGhS~GG-~val~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~ 167 (275)
++|||||| -+++..+.++|+.+.++|+++.+|..... ......+.+.++..... ...+.+...
T Consensus 127 l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~-------~~~e~~e~i~~m~~~d~~~~~~~~rke~~~~l~~~ 199 (315)
T KOG2382|consen 127 LLGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGR-------SYGEYRELIKAMIQLDLSIGVSRGRKEALKSLIEV 199 (315)
T ss_pred ecccCcchHHHHHHHHHhcCcccceeEEEecCCccCCc-------ccchHHHHHHHHHhccccccccccHHHHHHHHHHH
Confidence 99999999 77788889999999999999987742111 11112222322221100 000111110
Q ss_pred ccCCCCChHHHHHHHHHhh-----------cCChHHHHHHHHHHhhhchHhhh--CCCCCcEEEEEeCCCCCCCHHHHHH
Q 045774 168 ALGADVPDMALQEFSRTLF-----------SMRPDIALHVARTAFAADLRHVL--GLVRVPVCIIQSSVDLSVPPAVAEY 234 (275)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~d~~~~l--~~i~~P~l~i~G~~D~~~~~~~~~~ 234 (275)
.. +....++....+ ..+.+.............++..+ ...+.|+++|+|.++..+|.+.-..
T Consensus 200 ~~-----d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~~~~~~pvlfi~g~~S~fv~~~~~~~ 274 (315)
T KOG2382|consen 200 GF-----DNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLEDGPYTGPVLFIKGLQSKFVPDEHYPR 274 (315)
T ss_pred hc-----chHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccccccccceeEEecCCCCCcChhHHHH
Confidence 00 001111111111 11111111111111011122223 5678999999999999999998888
Q ss_pred HHHHcCCCccEEEcCCCCCCCCCCChHHHHHHHHHHHHhh
Q 045774 235 MRRHLGGPTVLEFLPTHGHLPHVSSPAPVANAIQQLLRRR 274 (275)
Q Consensus 235 ~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 274 (275)
+++.+|. .+++.+++||||+|.|+|++|.+.|.+|+.++
T Consensus 275 ~~~~fp~-~e~~~ld~aGHwVh~E~P~~~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 275 MEKIFPN-VEVHELDEAGHWVHLEKPEEFIESISEFLEEP 313 (315)
T ss_pred HHHhccc-hheeecccCCceeecCCHHHHHHHHHHHhccc
Confidence 9999998 68999999999999999999999999998764
No 44
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.95 E-value=4e-26 Score=184.80 Aligned_cols=239 Identities=20% Similarity=0.324 Sum_probs=161.0
Q ss_pred eEEEEcCCCCCh-hhhhhhHHHhhc-CCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhC------CCceE
Q 045774 26 IIVFSHGFGSDQ-SVWSRVIPSFTR-AYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALE------IDRCA 97 (275)
Q Consensus 26 ~ivllHG~~~~~-~~w~~~~~~l~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~------~~~~~ 97 (275)
.|+|+||++... ..+...+..|+. +|.|+++|++|||.|+.... ...+++..++|+..+.+... ..+..
T Consensus 56 lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~~---yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~F 132 (313)
T KOG1455|consen 56 LVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLHA---YVPSFDLVVDDVISFFDSIKEREENKGLPRF 132 (313)
T ss_pred EEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCCcc---cCCcHHHHHHHHHHHHHHHhhccccCCCCee
Confidence 699999998875 777778888876 79999999999999985321 12479999999999998532 23699
Q ss_pred EEEeChhHHHHHHHHHhCCccccceeeecCCCCCcCCCCCcCCCCcchHHHHHHHHhhhhhhhhhhhccc--ccCCCCCh
Q 045774 98 FVGHSVSAMIGLLAAIHRPNLFSRLILIGGSPRFTNDGNYIGGIDPAHMEEVFRRMESNYESWVAGFVPM--ALGADVPD 175 (275)
Q Consensus 98 lvGhS~GG~val~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 175 (275)
|.||||||+|++.++.+.|+-..++|++++......+.. +...+..++..+..-...|. ..+. .......+
T Consensus 133 L~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~k-----p~p~v~~~l~~l~~liP~wk--~vp~~d~~~~~~kd 205 (313)
T KOG1455|consen 133 LFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTK-----PHPPVISILTLLSKLIPTWK--IVPTKDIIDVAFKD 205 (313)
T ss_pred eeecCcchHHHHHHHhhCCcccccceeeecccccCCccC-----CCcHHHHHHHHHHHhCCcee--ecCCccccccccCC
Confidence 999999999999999999999999999987543322210 11122333333322222332 1111 11111111
Q ss_pred HHH-HHHHHHh--hcCChHHHHHHHHHHhhhchHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHHcCCC-ccEEEcCCC
Q 045774 176 MAL-QEFSRTL--FSMRPDIALHVARTAFAADLRHVLGLVRVPVCIIQSSVDLSVPPAVAEYMRRHLGGP-TVLEFLPTH 251 (275)
Q Consensus 176 ~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~-~~~~~i~~~ 251 (275)
... +...... +...+.............++...++++++|.+++||++|.++.++.++.+.+..+.. ++++++|+.
T Consensus 206 p~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~vtvPflilHG~dD~VTDp~~Sk~Lye~A~S~DKTlKlYpGm 285 (313)
T KOG1455|consen 206 PEKRKILRSDPLCYTGKPRLKTAYELLRVTADLEKNLNEVTVPFLILHGTDDKVTDPKVSKELYEKASSSDKTLKLYPGM 285 (313)
T ss_pred HHHHHHhhcCCceecCCccHHHHHHHHHHHHHHHHhcccccccEEEEecCCCcccCcHHHHHHHHhccCCCCceeccccH
Confidence 112 2222211 222233222211112345788889999999999999999999999999999887654 689999999
Q ss_pred CCCCCC-CCh---HHHHHHHHHHHHhh
Q 045774 252 GHLPHV-SSP---APVANAIQQLLRRR 274 (275)
Q Consensus 252 gH~~~~-e~p---~~~~~~i~~fl~~~ 274 (275)
=|.++. |-+ +.|...|.+||.+|
T Consensus 286 ~H~Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 286 WHSLLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred HHHhhcCCCchhHHHHHHHHHHHHHhc
Confidence 999987 333 44667778888776
No 45
>PLN02511 hydrolase
Probab=99.95 E-value=5.4e-27 Score=205.34 Aligned_cols=242 Identities=14% Similarity=0.189 Sum_probs=144.1
Q ss_pred CCceEEEEcCCCCChh-hh-hhhHH-HhhcCCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhCC----Cc
Q 045774 23 GQSIIVFSHGFGSDQS-VW-SRVIP-SFTRAYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALEI----DR 95 (275)
Q Consensus 23 g~~~ivllHG~~~~~~-~w-~~~~~-~l~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~----~~ 95 (275)
++|+|||+||+++++. .| ..++. .+.++|+|+++|+||||.|.... . .++ ...+++|+.+++++++. .+
T Consensus 99 ~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~--~-~~~-~~~~~~Dl~~~i~~l~~~~~~~~ 174 (388)
T PLN02511 99 DAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTT--P-QFY-SASFTGDLRQVVDHVAGRYPSAN 174 (388)
T ss_pred CCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCC--c-CEE-cCCchHHHHHHHHHHHHHCCCCC
Confidence 4468999999976653 34 44554 45668999999999999996321 1 122 35778899888888865 57
Q ss_pred eEEEEeChhHHHHHHHHHhCCcc--ccceeeecCCCCCc-CCCCCcCCCCcchHHH-HHHHHhhhhhhhhhhhccc--cc
Q 045774 96 CAFVGHSVSAMIGLLAAIHRPNL--FSRLILIGGSPRFT-NDGNYIGGIDPAHMEE-VFRRMESNYESWVAGFVPM--AL 169 (275)
Q Consensus 96 ~~lvGhS~GG~val~~a~~~p~~--v~~lvli~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~ 169 (275)
+++|||||||++++.++.++|++ |+++++++++.... ....+...+. ..... +...+..........+... .+
T Consensus 175 ~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~~~~~~~~~~-~~y~~~~~~~l~~~~~~~~~~~~~~~~~~ 253 (388)
T PLN02511 175 LYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIADEDFHKGFN-NVYDKALAKALRKIFAKHALLFEGLGGEY 253 (388)
T ss_pred EEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHHHHHHhccHH-HHHHHHHHHHHHHHHHHHHHHHhhCCCcc
Confidence 99999999999999999999988 88888886533210 0000011110 00111 1111111000000000000 00
Q ss_pred CCC--CChHHHHHHHHHhhcC--ChHHHHHHHHHHhhhchHhhhCCCCCcEEEEEeCCCCCCCHHHH-HHHHHHcCCCcc
Q 045774 170 GAD--VPDMALQEFSRTLFSM--RPDIALHVARTAFAADLRHVLGLVRVPVCIIQSSVDLSVPPAVA-EYMRRHLGGPTV 244 (275)
Q Consensus 170 ~~~--~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~d~~~~l~~i~~P~l~i~G~~D~~~~~~~~-~~~~~~~~~~~~ 244 (275)
... .....+..+.+.+... .......+ ....+....+++|++|+|+|+|++|.++|.+.. ..+.+.+++ .+
T Consensus 254 ~~~~~~~~~~~~~fd~~~t~~~~gf~~~~~y---y~~~s~~~~L~~I~vPtLiI~g~dDpi~p~~~~~~~~~~~~p~-~~ 329 (388)
T PLN02511 254 NIPLVANAKTVRDFDDGLTRVSFGFKSVDAY---YSNSSSSDSIKHVRVPLLCIQAANDPIAPARGIPREDIKANPN-CL 329 (388)
T ss_pred CHHHHHhCCCHHHHHHhhhhhcCCCCCHHHH---HHHcCchhhhccCCCCeEEEEcCCCCcCCcccCcHhHHhcCCC-EE
Confidence 000 0000011222111100 00000000 112334567889999999999999999987754 345566776 68
Q ss_pred EEEcCCCCCCCCCCChHH------HHHHHHHHHHh
Q 045774 245 LEFLPTHGHLPHVSSPAP------VANAIQQLLRR 273 (275)
Q Consensus 245 ~~~i~~~gH~~~~e~p~~------~~~~i~~fl~~ 273 (275)
++++++|||+.++|+|+. +++.|.+|++.
T Consensus 330 l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~~ 364 (388)
T PLN02511 330 LIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLEA 364 (388)
T ss_pred EEECCCcceeccccCCCCCCCCccHHHHHHHHHHH
Confidence 889999999999999976 58999999864
No 46
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.94 E-value=6.2e-25 Score=185.06 Aligned_cols=247 Identities=17% Similarity=0.232 Sum_probs=154.7
Q ss_pred hceEEecCC-C--ceEEEEcCCCCChhhhhhhHHHhhc-CCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHH
Q 045774 15 LNVRVVGQG-Q--SIIVFSHGFGSDQSVWSRVIPSFTR-AYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDA 90 (275)
Q Consensus 15 ~~~~~~g~g-~--~~ivllHG~~~~~~~w~~~~~~l~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~ 90 (275)
++|+.+-.. + .+||++||.+.++..|..++..|.. +|.|+++|+||||.|... ......++.++.+|+.++++.
T Consensus 22 ~~~~~~~~~~~~~g~Vvl~HG~~Eh~~ry~~la~~l~~~G~~V~~~D~RGhG~S~r~--~rg~~~~f~~~~~dl~~~~~~ 99 (298)
T COG2267 22 LRYRTWAAPEPPKGVVVLVHGLGEHSGRYEELADDLAARGFDVYALDLRGHGRSPRG--QRGHVDSFADYVDDLDAFVET 99 (298)
T ss_pred EEEEeecCCCCCCcEEEEecCchHHHHHHHHHHHHHHhCCCEEEEecCCCCCCCCCC--CcCCchhHHHHHHHHHHHHHH
Confidence 566665322 1 4799999999999999999998865 799999999999999621 122234699999999999998
Q ss_pred hC----CCceEEEEeChhHHHHHHHHHhCCccccceeeecCCCCCcCCCCCcCCCCcchHHHHHHHHh-hhhhhhhhhh-
Q 045774 91 LE----IDRCAFVGHSVSAMIGLLAAIHRPNLFSRLILIGGSPRFTNDGNYIGGIDPAHMEEVFRRME-SNYESWVAGF- 164 (275)
Q Consensus 91 l~----~~~~~lvGhS~GG~val~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~- 164 (275)
.. ..+++|+||||||.|++.++.+++.+|+++|+.++.-.... ......+..+. .....+...+
T Consensus 100 ~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~----------~~~~~~~~~~~~~~~~~~~p~~~ 169 (298)
T COG2267 100 IAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGG----------AILRLILARLALKLLGRIRPKLP 169 (298)
T ss_pred HhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCCh----------hHHHHHHHHHhcccccccccccc
Confidence 75 35899999999999999999999999999999876432110 00000000000 0000000000
Q ss_pred -cc----cccCC--CCChHHHHHHHHHhh-cCChHHHHHHHHHHhhhc--hHhhhCCCCCcEEEEEeCCCCCCC-HHHHH
Q 045774 165 -VP----MALGA--DVPDMALQEFSRTLF-SMRPDIALHVARTAFAAD--LRHVLGLVRVPVCIIQSSVDLSVP-PAVAE 233 (275)
Q Consensus 165 -~~----~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d--~~~~l~~i~~P~l~i~G~~D~~~~-~~~~~ 233 (275)
.. ..... .......+.+.+.-. .............+.... .......+++|+|+++|++|.+++ .+...
T Consensus 170 ~~~~~~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~~~~~~~~~~~~PvLll~g~~D~vv~~~~~~~ 249 (298)
T COG2267 170 VDSNLLEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRVPALRDAPAIALPVLLLQGGDDRVVDNVEGLA 249 (298)
T ss_pred cCcccccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhcccchhccccccCCEEEEecCCCccccCcHHHH
Confidence 00 00000 001111222222111 111111111111111111 223356789999999999999999 46555
Q ss_pred HHHHHcCCC-ccEEEcCCCCCCCCCCChH---HHHHHHHHHHHh
Q 045774 234 YMRRHLGGP-TVLEFLPTHGHLPHVSSPA---PVANAIQQLLRR 273 (275)
Q Consensus 234 ~~~~~~~~~-~~~~~i~~~gH~~~~e~p~---~~~~~i~~fl~~ 273 (275)
++.+..... +++++++++.|-++.|.+. ++.+.+.+|+.+
T Consensus 250 ~~~~~~~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~ 293 (298)
T COG2267 250 RFFERAGSPDKELKVIPGAYHELLNEPDRAREEVLKDILAWLAE 293 (298)
T ss_pred HHHHhcCCCCceEEecCCcchhhhcCcchHHHHHHHHHHHHHHh
Confidence 555555433 4799999999999999875 677888888865
No 47
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.93 E-value=2.1e-24 Score=185.42 Aligned_cols=254 Identities=16% Similarity=0.154 Sum_probs=147.8
Q ss_pred hceEEecC--CCceEEEEcCCCCChh-hh-------------------------hhhHHHhhc-CCEEEEEccCCCCCCC
Q 045774 15 LNVRVVGQ--GQSIIVFSHGFGSDQS-VW-------------------------SRVIPSFTR-AYRVISFDLMCSGSCD 65 (275)
Q Consensus 15 ~~~~~~g~--g~~~ivllHG~~~~~~-~w-------------------------~~~~~~l~~-~~~via~Dl~G~G~S~ 65 (275)
++++.+.. .+.+|+++||++.+.. .+ ..+++.|.+ +|+|+++|+||||.|+
T Consensus 10 l~~~~~~~~~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~~D~rGHG~S~ 89 (332)
T TIGR01607 10 LKTYSWIVKNAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYGLDLQGHGESD 89 (332)
T ss_pred EEEeeeeccCCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEEecccccCCCc
Confidence 55555532 2248999999998885 11 246777855 7999999999999986
Q ss_pred CCCCCcccccchhHHHHHHHHHHHHhC------------------------CCceEEEEeChhHHHHHHHHHhCCc----
Q 045774 66 PTNYDFQRYATLDGYVDDLLSFLDALE------------------------IDRCAFVGHSVSAMIGLLAAIHRPN---- 117 (275)
Q Consensus 66 ~~~~~~~~~~~~~~~a~dl~~~l~~l~------------------------~~~~~lvGhS~GG~val~~a~~~p~---- 117 (275)
..........+++++++|+.++++... ..+++|+||||||++++.++.++++
T Consensus 90 ~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~~~~~~~~~ 169 (332)
T TIGR01607 90 GLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLELLGKSNEN 169 (332)
T ss_pred cccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHHHhcccccc
Confidence 321111112479999999999998642 2469999999999999998876653
Q ss_pred ----cccceeeecCCCCCcC-CCCCcCCCCcchHHHHHHHHhhhhhhhhhhhcc-cccCCCCChHHHHHHHHHhhcCChH
Q 045774 118 ----LFSRLILIGGSPRFTN-DGNYIGGIDPAHMEEVFRRMESNYESWVAGFVP-MALGADVPDMALQEFSRTLFSMRPD 191 (275)
Q Consensus 118 ----~v~~lvli~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (275)
.++++|++++.-.... .......+. .....+...+. .+...+.. ............+.+...-+.....
T Consensus 170 ~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~-~~~~~l~~~~~----~~~p~~~~~~~~~~~~~~~~~~~~~~Dp~~~~~~ 244 (332)
T TIGR01607 170 NDKLNIKGCISLSGMISIKSVGSDDSFKFK-YFYLPVMNFMS----RVFPTFRISKKIRYEKSPYVNDIIKFDKFRYDGG 244 (332)
T ss_pred ccccccceEEEeccceEEecccCCCcchhh-hhHHHHHHHHH----HHCCcccccCccccccChhhhhHHhcCccccCCc
Confidence 5889988775421100 000000000 00011111111 11111100 0000000011112221111111111
Q ss_pred HHHHHHHHHh--hhchHhhhCCC--CCcEEEEEeCCCCCCCHHHHHHHHHHcCC-CccEEEcCCCCCCCCCCC-hHHHHH
Q 045774 192 IALHVARTAF--AADLRHVLGLV--RVPVCIIQSSVDLSVPPAVAEYMRRHLGG-PTVLEFLPTHGHLPHVSS-PAPVAN 265 (275)
Q Consensus 192 ~~~~~~~~~~--~~d~~~~l~~i--~~P~l~i~G~~D~~~~~~~~~~~~~~~~~-~~~~~~i~~~gH~~~~e~-p~~~~~ 265 (275)
........+. .......+..+ ++|+|+|+|++|.+++++..+.+.+.+.. ..+++++++++|.++.|. ++++.+
T Consensus 245 ~s~~~~~~l~~~~~~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~~~~l~~~~g~~H~i~~E~~~~~v~~ 324 (332)
T TIGR01607 245 ITFNLASELIKATDTLDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSISNKELHTLEDMDHVITIEPGNEEVLK 324 (332)
T ss_pred ccHHHHHHHHHHHHHHHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccCCCcEEEEECCCCCCCccCCCHHHHHH
Confidence 1111111111 11222344455 79999999999999999888888766542 257888999999999996 688999
Q ss_pred HHHHHHHh
Q 045774 266 AIQQLLRR 273 (275)
Q Consensus 266 ~i~~fl~~ 273 (275)
.|.+||.+
T Consensus 325 ~i~~wL~~ 332 (332)
T TIGR01607 325 KIIEWISN 332 (332)
T ss_pred HHHHHhhC
Confidence 99999863
No 48
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.93 E-value=4.8e-26 Score=185.16 Aligned_cols=212 Identities=23% Similarity=0.328 Sum_probs=133.3
Q ss_pred CEEEEEccCCCCCCCCC-CCCcccccchhHHHHHHHHHHHHhCCCceEEEEeChhHHHHHHHHHhCCccccceeeecCCC
Q 045774 51 YRVISFDLMCSGSCDPT-NYDFQRYATLDGYVDDLLSFLDALEIDRCAFVGHSVSAMIGLLAAIHRPNLFSRLILIGGSP 129 (275)
Q Consensus 51 ~~via~Dl~G~G~S~~~-~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~GG~val~~a~~~p~~v~~lvli~~~~ 129 (275)
|+|+++|+||+|.|++. ...... .+.+++++++..++++++.+++++|||||||++++.+|.++|++|+++|++++.+
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~~~ 79 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPD-YTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPERVKKLVLISPPP 79 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCT-HCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESS
T ss_pred CEEEEEeCCCCCCCCCCccCCccc-ccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCchhhcCcEEEeeec
Confidence 78999999999999850 112233 4699999999999999999999999999999999999999999999999998742
Q ss_pred ---CCcCCCCCcCCCCcchHHHHH-HH----Hhhhhhhhhhhhccc--ccCCCCChHHHHHH-HHHhhcCC-hHHHHH--
Q 045774 130 ---RFTNDGNYIGGIDPAHMEEVF-RR----MESNYESWVAGFVPM--ALGADVPDMALQEF-SRTLFSMR-PDIALH-- 195 (275)
Q Consensus 130 ---~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~-- 195 (275)
.......+. ........ .. ............... ...........+.. ........ ......
T Consensus 80 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (230)
T PF00561_consen 80 DLPDGLWNRIWP----RGNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDREFVEDFLKQFQSQQYARFAETDAFDNMF 155 (230)
T ss_dssp HHHHHHHHHCHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred cchhhhhHHHHh----hhhhhhhHHHhhhccccccchhhhhhhhhheeeccCccccchhhccchhhhhHHHHHHHHhhhc
Confidence 000000000 00000000 00 000000000000000 00000000000001 11111100 011111
Q ss_pred --HHHHHhhhchHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHHcCCCccEEEcCCCCCCCCCCChHHHHHHHH
Q 045774 196 --VARTAFAADLRHVLGLVRVPVCIIQSSVDLSVPPAVAEYMRRHLGGPTVLEFLPTHGHLPHVSSPAPVANAIQ 268 (275)
Q Consensus 196 --~~~~~~~~d~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~ 268 (275)
........+....+.++++|+++++|++|.++|+.....+++.+|+ .++++++++||+.++|+|+++++.|.
T Consensus 156 ~~~~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~~-~~~~~~~~~GH~~~~~~~~~~~~~i~ 229 (230)
T PF00561_consen 156 WNALGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLIPN-SQLVLIEGSGHFAFLEGPDEFNEIII 229 (230)
T ss_dssp HHHHHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHSTT-EEEEEETTCCSTHHHHSHHHHHHHHH
T ss_pred cccccccccccccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhcCC-CEEEECCCCChHHHhcCHHhhhhhhc
Confidence 1111223455667889999999999999999999999989999998 68889999999999999999999875
No 49
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.92 E-value=3.7e-23 Score=169.73 Aligned_cols=252 Identities=27% Similarity=0.411 Sum_probs=149.2
Q ss_pred hceEEecCCCceEEEEcCCCCChhhhhhhHHHhhc---CCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHh
Q 045774 15 LNVRVVGQGQSIIVFSHGFGSDQSVWSRVIPSFTR---AYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDAL 91 (275)
Q Consensus 15 ~~~~~~g~g~~~ivllHG~~~~~~~w~~~~~~l~~---~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l 91 (275)
+.|+..+.+.++|+|+||++.+...|......+.. .|+++++|+||||.|. . . ..+...+++++..+++++
T Consensus 12 ~~~~~~~~~~~~i~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~-~---~--~~~~~~~~~~~~~~~~~~ 85 (282)
T COG0596 12 LAYREAGGGGPPLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSD-P---A--GYSLSAYADDLAALLDAL 85 (282)
T ss_pred EEEeecCCCCCeEEEeCCCCCchhhhHHHHHHhhccccceEEEEecccCCCCCC-c---c--cccHHHHHHHHHHHHHHh
Confidence 34455454445899999999999999984333333 2899999999999986 1 0 113555699999999999
Q ss_pred CCCceEEEEeChhHHHHHHHHHhCCccccceeeecCCCCCcCCCCCcC-CCCcchHHHHHHHH----hhhhhhhhhhh--
Q 045774 92 EIDRCAFVGHSVSAMIGLLAAIHRPNLFSRLILIGGSPRFTNDGNYIG-GIDPAHMEEVFRRM----ESNYESWVAGF-- 164 (275)
Q Consensus 92 ~~~~~~lvGhS~GG~val~~a~~~p~~v~~lvli~~~~~~~~~~~~~~-~~~~~~~~~~~~~~----~~~~~~~~~~~-- 164 (275)
+.++++++||||||.+++.++.++|++++++|++++............ .............. ......+....
T Consensus 86 ~~~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (282)
T COG0596 86 GLEKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGAAPLAALADLLLGLDAAAFAALLAALGL 165 (282)
T ss_pred CCCceEEEEecccHHHHHHHHHhcchhhheeeEecCCCCcccccCccccCccccchhhhhhhhhccchhhhhhhhhcccc
Confidence 999999999999999999999999999999999987543110000000 00000000000000 00000000000
Q ss_pred cccccC------C-CCChHHHHHHHHHhhcCChHHHHHHHHHHhhhchHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHH
Q 045774 165 VPMALG------A-DVPDMALQEFSRTLFSMRPDIALHVARTAFAADLRHVLGLVRVPVCIIQSSVDLSVPPAVAEYMRR 237 (275)
Q Consensus 165 ~~~~~~------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~ 237 (275)
...... . ................................+....+..+++|+++++|++|...|......+.+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~d~~~~~~~~~~~~~ 245 (282)
T COG0596 166 LAALAAAARAGLAEALRAPLLGAAAAAFARAARADLAAALLALLDRDLRAALARITVPTLIIHGEDDPVVPAELARRLAA 245 (282)
T ss_pred cccccccchhccccccccccchhHhhhhhhhcccccchhhhcccccccchhhccCCCCeEEEecCCCCcCCHHHHHHHHh
Confidence 000000 0 000000000000000000000000000000112344567889999999999997777765566666
Q ss_pred HcCCCccEEEcCCCCCCCCCCChHHHHHHHHHHHH
Q 045774 238 HLGGPTVLEFLPTHGHLPHVSSPAPVANAIQQLLR 272 (275)
Q Consensus 238 ~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 272 (275)
.+++..++++++++||+++.|+|+.+++.+.+++.
T Consensus 246 ~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~~~~ 280 (282)
T COG0596 246 ALPNDARLVVIPGAGHFPHLEAPEAFAAALLAFLE 280 (282)
T ss_pred hCCCCceEEEeCCCCCcchhhcHHHHHHHHHHHHh
Confidence 67642478889999999999999999999988554
No 50
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.92 E-value=2.1e-23 Score=174.73 Aligned_cols=225 Identities=19% Similarity=0.197 Sum_probs=135.4
Q ss_pred ceEEEEcCCC----CChhhhhhhHHHhhc-CCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHh-----CCC
Q 045774 25 SIIVFSHGFG----SDQSVWSRVIPSFTR-AYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDAL-----EID 94 (275)
Q Consensus 25 ~~ivllHG~~----~~~~~w~~~~~~l~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l-----~~~ 94 (275)
+.||++||.+ ++...|..+++.|++ +|+|+++|+||||.|.... .+++++.+|+.++++.+ +.+
T Consensus 27 ~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~------~~~~~~~~d~~~~~~~l~~~~~g~~ 100 (274)
T TIGR03100 27 TGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGEN------LGFEGIDADIAAAIDAFREAAPHLR 100 (274)
T ss_pred CeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC------CCHHHHHHHHHHHHHHHHhhCCCCC
Confidence 4677777654 234456777888876 7999999999999986321 24778888888888876 567
Q ss_pred ceEEEEeChhHHHHHHHHHhCCccccceeeecCCCCCcCCCCCcCCCCcchHHHHHHHHhhhhhhhhhhhcccccCCCCC
Q 045774 95 RCAFVGHSVSAMIGLLAAIHRPNLFSRLILIGGSPRFTNDGNYIGGIDPAHMEEVFRRMESNYESWVAGFVPMALGADVP 174 (275)
Q Consensus 95 ~~~lvGhS~GG~val~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (275)
+++++||||||.+++.+|.. +++|+++|++++..... . ..........+.........|. ... .....
T Consensus 101 ~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~~~-~-----~~~~~~~~~~~~~~~~~~~~~~----~~~-~g~~~ 168 (274)
T TIGR03100 101 RIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWVRTE-A-----AQAASRIRHYYLGQLLSADFWR----KLL-SGEVN 168 (274)
T ss_pred cEEEEEECHHHHHHHHHhhh-CCCccEEEEECCccCCc-c-----cchHHHHHHHHHHHHhChHHHH----Hhc-CCCcc
Confidence 89999999999999998764 57899999997632110 0 0000001111100000011111 000 11111
Q ss_pred h-HHHHHHHHHhhcC---ChHHHHHHHHHHhhhchHhhhCCCCCcEEEEEeCCCCCCCHHHH------HHHHHHc--CCC
Q 045774 175 D-MALQEFSRTLFSM---RPDIALHVARTAFAADLRHVLGLVRVPVCIIQSSVDLSVPPAVA------EYMRRHL--GGP 242 (275)
Q Consensus 175 ~-~~~~~~~~~~~~~---~~~~~~~~~~~~~~~d~~~~l~~i~~P~l~i~G~~D~~~~~~~~------~~~~~~~--~~~ 242 (275)
. ...+.+.+.+... .+.... ..+..+....+..+++|+++++|+.|...+ ... +..++.+ ++
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~~~P~ll~~g~~D~~~~-~~~~~~~~~~~~~~~l~~~~- 242 (274)
T TIGR03100 169 LGSSLRGLGDALLKARQKGDEVAH----GGLAERMKAGLERFQGPVLFILSGNDLTAQ-EFADSVLGEPAWRGALEDPG- 242 (274)
T ss_pred HHHHHHHHHHHHHhhhhcCCCccc----chHHHHHHHHHHhcCCcEEEEEcCcchhHH-HHHHHhccChhhHHHhhcCC-
Confidence 0 1112222211100 000000 012344556677889999999999998753 222 3344445 44
Q ss_pred ccEEEcCCCCCCCCCCCh-HHHHHHHHHHHHh
Q 045774 243 TVLEFLPTHGHLPHVSSP-APVANAIQQLLRR 273 (275)
Q Consensus 243 ~~~~~i~~~gH~~~~e~p-~~~~~~i~~fl~~ 273 (275)
.++..++++||++..|++ +++.+.|.+||.+
T Consensus 243 v~~~~~~~~~H~l~~e~~~~~v~~~i~~wL~~ 274 (274)
T TIGR03100 243 IERVEIDGADHTFSDRVWREWVAARTTEWLRR 274 (274)
T ss_pred eEEEecCCCCcccccHHHHHHHHHHHHHHHhC
Confidence 578889999999966666 9999999999964
No 51
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.92 E-value=3.8e-23 Score=159.94 Aligned_cols=224 Identities=18% Similarity=0.273 Sum_probs=151.1
Q ss_pred CCceEEEEcCCCCChhhhhhhHHHhhc-CCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHh---CCCceEE
Q 045774 23 GQSIIVFSHGFGSDQSVWSRVIPSFTR-AYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDAL---EIDRCAF 98 (275)
Q Consensus 23 g~~~ivllHG~~~~~~~w~~~~~~l~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l---~~~~~~l 98 (275)
|+..|||||||.+++...+.+.+.|.+ +|.|.|+-+||||-... +... ++.++|-+++.+..++| +.+.+.+
T Consensus 14 G~~AVLllHGFTGt~~Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e---~fl~-t~~~DW~~~v~d~Y~~L~~~gy~eI~v 89 (243)
T COG1647 14 GNRAVLLLHGFTGTPRDVRMLGRYLNENGYTVYAPRYPGHGTLPE---DFLK-TTPRDWWEDVEDGYRDLKEAGYDEIAV 89 (243)
T ss_pred CCEEEEEEeccCCCcHHHHHHHHHHHHCCceEecCCCCCCCCCHH---HHhc-CCHHHHHHHHHHHHHHHHHcCCCeEEE
Confidence 336899999999999999999999987 79999999999997631 1111 35677766666655544 6789999
Q ss_pred EEeChhHHHHHHHHHhCCccccceeeecCCCCCcCCCCCcCCCCcchHHHHHHHHhhhhhhhhhhhcccccCCCCChHHH
Q 045774 99 VGHSVSAMIGLLAAIHRPNLFSRLILIGGSPRFTNDGNYIGGIDPAHMEEVFRRMESNYESWVAGFVPMALGADVPDMAL 178 (275)
Q Consensus 99 vGhS~GG~val~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (275)
+|-||||..++-+|.++| ++++|.++++.....+ ...++.+.... .+.+.+ .+. +.+..
T Consensus 90 ~GlSmGGv~alkla~~~p--~K~iv~m~a~~~~k~~--------~~iie~~l~y~-~~~kk~--------e~k--~~e~~ 148 (243)
T COG1647 90 VGLSMGGVFALKLAYHYP--PKKIVPMCAPVNVKSW--------RIIIEGLLEYF-RNAKKY--------EGK--DQEQI 148 (243)
T ss_pred EeecchhHHHHHHHhhCC--ccceeeecCCcccccc--------hhhhHHHHHHH-HHhhhc--------cCC--CHHHH
Confidence 999999999999999999 9999998765432111 01111111111 111111 011 11112
Q ss_pred HHHHHHhhcCChHHHHHHHHHHhhhchHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHHcC-CCccEEEcCCCCCCCCC
Q 045774 179 QEFSRTLFSMRPDIALHVARTAFAADLRHVLGLVRVPVCIIQSSVDLSVPPAVAEYMRRHLG-GPTVLEFLPTHGHLPHV 257 (275)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~ 257 (275)
+...+.+.. .+.. ......-+..+.+..+..|.+|++++.|.+|..+|.+.+..+.+.+. +..++.+++++||.+..
T Consensus 149 ~~e~~~~~~-~~~~-~~~~~~~~i~~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~SgHVIt~ 226 (243)
T COG1647 149 DKEMKSYKD-TPMT-TTAQLKKLIKDARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEGSGHVITL 226 (243)
T ss_pred HHHHHHhhc-chHH-HHHHHHHHHHHHHhhhhhcccchhheecccCCCCCHHHHHHHHHhccCCcceeEEEccCCceeec
Confidence 222211110 0110 00111123345677788999999999999999999999998888764 33689999999999776
Q ss_pred CC-hHHHHHHHHHHHHh
Q 045774 258 SS-PAPVANAIQQLLRR 273 (275)
Q Consensus 258 e~-p~~~~~~i~~fl~~ 273 (275)
+. .+.+.+.+.+||+.
T Consensus 227 D~Erd~v~e~V~~FL~~ 243 (243)
T COG1647 227 DKERDQVEEDVITFLEK 243 (243)
T ss_pred chhHHHHHHHHHHHhhC
Confidence 65 47799999999863
No 52
>PRK10985 putative hydrolase; Provisional
Probab=99.91 E-value=2.8e-23 Score=178.15 Aligned_cols=245 Identities=11% Similarity=0.058 Sum_probs=133.9
Q ss_pred CceEEEEcCCCCChh--hhhhhHHHhhc-CCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhCCCceEEEE
Q 045774 24 QSIIVFSHGFGSDQS--VWSRVIPSFTR-AYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALEIDRCAFVG 100 (275)
Q Consensus 24 ~~~ivllHG~~~~~~--~w~~~~~~l~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvG 100 (275)
.|+||++||++++.. .+..++..|.+ +|+|+++|+||||.|.............++..+.+..+.++++.+++++||
T Consensus 58 ~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~~vG 137 (324)
T PRK10985 58 KPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHRIYHSGETEDARFFLRWLQREFGHVPTAAVG 137 (324)
T ss_pred CCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcceECCCchHHHHHHHHHHHHhCCCCCEEEEE
Confidence 468999999987643 34567777765 799999999999977421111101112333333333333445677899999
Q ss_pred eChhHHHHHHHHHhCCcc--ccceeeecCCCCCcCCCCC-cCCCCcchHHHHH-HHHhhhhhhhhhhhcccccCCCCC--
Q 045774 101 HSVSAMIGLLAAIHRPNL--FSRLILIGGSPRFTNDGNY-IGGIDPAHMEEVF-RRMESNYESWVAGFVPMALGADVP-- 174 (275)
Q Consensus 101 hS~GG~val~~a~~~p~~--v~~lvli~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-- 174 (275)
|||||.+++.++..+++. ++++|++++.......... ...+. ......+ ..+..........+... ...+..
T Consensus 138 ~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~~~~~~~~~~~-~~~~~~~~ 215 (324)
T PRK10985 138 YSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACSYRMEQGFS-RVYQRYLLNLLKANAARKLAAYPGT-LPINLAQL 215 (324)
T ss_pred ecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHHHHHhhhHH-HHHHHHHHHHHHHHHHHHHHhcccc-ccCCHHHH
Confidence 999999888877777654 8999998764321100000 00000 0001100 00111100000010000 000000
Q ss_pred --hHHHHHHHHHhhcCChHHHHHHHHHHhhhchHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHHcCCCccEEEcCCCC
Q 045774 175 --DMALQEFSRTLFSMRPDIALHVARTAFAADLRHVLGLVRVPVCIIQSSVDLSVPPAVAEYMRRHLGGPTVLEFLPTHG 252 (275)
Q Consensus 175 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~g 252 (275)
...+..+.+.... ...............+....++++++|+++|+|++|.+++.+..+.+.+..++ .++++++++|
T Consensus 216 ~~~~~~~~fd~~~~~-~~~g~~~~~~~y~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~G 293 (324)
T PRK10985 216 KSVRRLREFDDLITA-RIHGFADAIDYYRQCSALPLLNQIRKPTLIIHAKDDPFMTHEVIPKPESLPPN-VEYQLTEHGG 293 (324)
T ss_pred hcCCcHHHHhhhhee-ccCCCCCHHHHHHHCChHHHHhCCCCCEEEEecCCCCCCChhhChHHHHhCCC-eEEEECCCCC
Confidence 0012222222111 00000000111112345567889999999999999999998887777777766 5778899999
Q ss_pred CCCCCCCh-----HHHHHHHHHHHH
Q 045774 253 HLPHVSSP-----APVANAIQQLLR 272 (275)
Q Consensus 253 H~~~~e~p-----~~~~~~i~~fl~ 272 (275)
|+.++|-. -..-+.+.+|++
T Consensus 294 H~~~~~g~~~~~~~w~~~~~~~~~~ 318 (324)
T PRK10985 294 HVGFVGGTLLKPQMWLEQRIPDWLT 318 (324)
T ss_pred ceeeCCCCCCCCCccHHHHHHHHHH
Confidence 99999853 245566666664
No 53
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.91 E-value=1.9e-22 Score=177.55 Aligned_cols=212 Identities=13% Similarity=0.113 Sum_probs=137.0
Q ss_pred ceEEEEcCCCCC-hhhhhhhHHHhhc-CCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHh---CCCceEEE
Q 045774 25 SIIVFSHGFGSD-QSVWSRVIPSFTR-AYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDAL---EIDRCAFV 99 (275)
Q Consensus 25 ~~ivllHG~~~~-~~~w~~~~~~l~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l---~~~~~~lv 99 (275)
|.||++||+.+. .+.|..+.+.|++ +|+|+++|+||+|.|..... . .+...+.+++.+++... +.+++.++
T Consensus 195 P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~~---~-~d~~~~~~avld~l~~~~~vd~~ri~l~ 270 (414)
T PRK05077 195 PTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWKL---T-QDSSLLHQAVLNALPNVPWVDHTRVAAF 270 (414)
T ss_pred cEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCc---c-ccHHHHHHHHHHHHHhCcccCcccEEEE
Confidence 456666666665 3678888888866 69999999999999853211 1 13455566777777665 55789999
Q ss_pred EeChhHHHHHHHHHhCCccccceeeecCCCCCcCCCCCcCCCCcchHHHHHHHHhhhhhhhhhhhcccccCCCCChHHHH
Q 045774 100 GHSVSAMIGLLAAIHRPNLFSRLILIGGSPRFTNDGNYIGGIDPAHMEEVFRRMESNYESWVAGFVPMALGADVPDMALQ 179 (275)
Q Consensus 100 GhS~GG~val~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (275)
||||||.+++.+|..+|++++++|++++........ ......+.... .. .+........... +
T Consensus 271 G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~~-------~~~~~~~p~~~----~~---~la~~lg~~~~~~---~ 333 (414)
T PRK05077 271 GFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLLTD-------PKRQQQVPEMY----LD---VLASRLGMHDASD---E 333 (414)
T ss_pred EEChHHHHHHHHHHhCCcCceEEEEECCccchhhcc-------hhhhhhchHHH----HH---HHHHHhCCCCCCh---H
Confidence 999999999999999999999999997643211000 00000000000 00 0000000000011 1
Q ss_pred HHHHHhhcCChHHHHHHHHHHhhhchHhhh-CCCCCcEEEEEeCCCCCCCHHHHHHHHHHcCCCccEEEcCCCCCCCCCC
Q 045774 180 EFSRTLFSMRPDIALHVARTAFAADLRHVL-GLVRVPVCIIQSSVDLSVPPAVAEYMRRHLGGPTVLEFLPTHGHLPHVS 258 (275)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l-~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e 258 (275)
.+.+.+.. +.......+ .++++|+|+|+|++|.++|.+..+.+++..++ .+++.+|++ ++.|
T Consensus 334 ~l~~~l~~-------------~sl~~~~~l~~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~~~-~~l~~i~~~---~~~e 396 (414)
T PRK05077 334 ALRVELNR-------------YSLKVQGLLGRRCPTPMLSGYWKNDPFSPEEDSRLIASSSAD-GKLLEIPFK---PVYR 396 (414)
T ss_pred HHHHHhhh-------------ccchhhhhhccCCCCcEEEEecCCCCCCCHHHHHHHHHhCCC-CeEEEccCC---CccC
Confidence 11111100 000001112 57999999999999999999999988888887 588889986 6778
Q ss_pred ChHHHHHHHHHHHHhh
Q 045774 259 SPAPVANAIQQLLRRR 274 (275)
Q Consensus 259 ~p~~~~~~i~~fl~~~ 274 (275)
.|+++.+.|.+||.+.
T Consensus 397 ~~~~~~~~i~~wL~~~ 412 (414)
T PRK05077 397 NFDKALQEISDWLEDR 412 (414)
T ss_pred CHHHHHHHHHHHHHHH
Confidence 9999999999999864
No 54
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.91 E-value=3.7e-22 Score=166.51 Aligned_cols=259 Identities=21% Similarity=0.298 Sum_probs=174.9
Q ss_pred hceEEecC----CCceEEEEcCCCCCh---h--------hhhhhHHH---h-hcCCEEEEEccCCCC-CC-CCCCCCcc-
Q 045774 15 LNVRVVGQ----GQSIIVFSHGFGSDQ---S--------VWSRVIPS---F-TRAYRVISFDLMCSG-SC-DPTNYDFQ- 72 (275)
Q Consensus 15 ~~~~~~g~----g~~~ivllHG~~~~~---~--------~w~~~~~~---l-~~~~~via~Dl~G~G-~S-~~~~~~~~- 72 (275)
+.|+.+|+ ....||++||+.+++ . +|+.++.. + .++|.||+.+..|.+ .| .|....+.
T Consensus 38 vay~T~Gtln~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~p~g 117 (368)
T COG2021 38 VAYETYGTLNAEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSINPGG 117 (368)
T ss_pred EEEEecccccccCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCcCCCC
Confidence 77888885 234799999998743 3 88887742 3 347999999999876 33 34321222
Q ss_pred -------cccchhHHHHHHHHHHHHhCCCce-EEEEeChhHHHHHHHHHhCCccccceeeecCCCCCc------------
Q 045774 73 -------RYATLDGYVDDLLSFLDALEIDRC-AFVGHSVSAMIGLLAAIHRPNLFSRLILIGGSPRFT------------ 132 (275)
Q Consensus 73 -------~~~~~~~~a~dl~~~l~~l~~~~~-~lvGhS~GG~val~~a~~~p~~v~~lvli~~~~~~~------------ 132 (275)
...|++|++..-..++++||++++ .+||-|||||.|++++..||++|.+++.|+++++..
T Consensus 118 ~~yg~~FP~~ti~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~s~~~ia~~~~~r~ 197 (368)
T COG2021 118 KPYGSDFPVITIRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARLSAQNIAFNEVQRQ 197 (368)
T ss_pred CccccCCCcccHHHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChHHHhhhheecccccCCHHHHHHHHHHHH
Confidence 224799999999999999999995 499999999999999999999999999998765421
Q ss_pred ---CCC-----CCcCCCCcchHHHHHHHH---h-hhhhhhhhhhcccccCCC----CChHHHHHHHH-----HhhcCChH
Q 045774 133 ---NDG-----NYIGGIDPAHMEEVFRRM---E-SNYESWVAGFVPMALGAD----VPDMALQEFSR-----TLFSMRPD 191 (275)
Q Consensus 133 ---~~~-----~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~-----~~~~~~~~ 191 (275)
.++ .|..+-.+.....+..++ . ...+.|..+|........ .....++.+.+ ...++++.
T Consensus 198 AI~~DP~~n~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~~~~~~~~~~f~vESYL~~qg~kf~~rfDaN 277 (368)
T COG2021 198 AIEADPDWNGGDYYEGTQPERGLRLARMLAHLTYRSEEELDERFGRRLQADPLRGGGVRFAVESYLDYQGDKFVARFDAN 277 (368)
T ss_pred HHHhCCCccCCCccCCCCcchhHHHHHHHHHHHccCHHHHHHHhcccccccccCCCchhHHHHHHHHHHHHHHHhccCcc
Confidence 122 233323333333333222 1 223344444443221111 01122333322 22334444
Q ss_pred HHHHHHHHHhhh-------chHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHHcCCCccE-EEcCCCCCCCCCCChHHH
Q 045774 192 IALHVARTAFAA-------DLRHVLGLVRVPVCIIQSSVDLSVPPAVAEYMRRHLGGPTVL-EFLPTHGHLPHVSSPAPV 263 (275)
Q Consensus 192 ~~~~~~~~~~~~-------d~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~-~~i~~~gH~~~~e~p~~~ 263 (275)
.+..+.+.+... +..+.++.+++|++++.-+.|..+|++.++.+.+.++....+ ++-+..||..++...+.+
T Consensus 278 sYL~lt~ald~~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~~~~i~S~~GHDaFL~e~~~~ 357 (368)
T COG2021 278 SYLYLTRALDYHDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPELQRALAEALPAAGALREIDSPYGHDAFLVESEAV 357 (368)
T ss_pred hHHHHHHHHHhcCCCCCcCcHHHHHhcCccCEEEEEecccccCCHHHHHHHHHhccccCceEEecCCCCchhhhcchhhh
Confidence 444444444332 345568999999999999999999999999999998875434 444679999999999999
Q ss_pred HHHHHHHHHh
Q 045774 264 ANAIQQLLRR 273 (275)
Q Consensus 264 ~~~i~~fl~~ 273 (275)
.+.|+.||+.
T Consensus 358 ~~~i~~fL~~ 367 (368)
T COG2021 358 GPLIRKFLAL 367 (368)
T ss_pred hHHHHHHhhc
Confidence 9999999974
No 55
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.90 E-value=2.6e-22 Score=179.61 Aligned_cols=241 Identities=17% Similarity=0.234 Sum_probs=144.9
Q ss_pred hhhceEEecC--CCceEEEEcCCCCChhhhh-----hhHHHhhc-CCEEEEEccCCCCCCCCCCCCcccccchhHHHHHH
Q 045774 13 EALNVRVVGQ--GQSIIVFSHGFGSDQSVWS-----RVIPSFTR-AYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDL 84 (275)
Q Consensus 13 ~~~~~~~~g~--g~~~ivllHG~~~~~~~w~-----~~~~~l~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl 84 (275)
+-++|.-..+ .++|||+|||+......|+ .++..|.+ +|+|+++|++|+|.|.... ....| ..+.+.+.+
T Consensus 175 eLi~Y~P~t~~~~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~-~~ddY-~~~~i~~al 252 (532)
T TIGR01838 175 QLIQYEPTTETVHKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADK-TFDDY-IRDGVIAAL 252 (532)
T ss_pred EEEEeCCCCCcCCCCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccC-Chhhh-HHHHHHHHH
Confidence 3355543322 3458999999999899997 68887765 7999999999999885321 11222 244566667
Q ss_pred HHHHHHhCCCceEEEEeChhHHHH---H-HHHHhC-CccccceeeecCCCCCcCCCCCcCCCCcc----hHHH-------
Q 045774 85 LSFLDALEIDRCAFVGHSVSAMIG---L-LAAIHR-PNLFSRLILIGGSPRFTNDGNYIGGIDPA----HMEE------- 148 (275)
Q Consensus 85 ~~~l~~l~~~~~~lvGhS~GG~va---l-~~a~~~-p~~v~~lvli~~~~~~~~~~~~~~~~~~~----~~~~------- 148 (275)
..+++.++.+++++|||||||.++ + .+++.+ |++|++++++++...+... +....+... .+++
T Consensus 253 ~~v~~~~g~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~-G~l~~f~~~~~~~~~e~~~~~~G~ 331 (532)
T TIGR01838 253 EVVEAITGEKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDP-GELGVFVDEEIVAGIERQNGGGGY 331 (532)
T ss_pred HHHHHhcCCCCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCc-chhhhhcCchhHHHHHHHHHhcCC
Confidence 778888899999999999999985 2 245555 8899999999876544321 111111111 1111
Q ss_pred --------HHHHHhhhhhhh---hhhhc----ccc-----cC---CCCChHHHHHHHHHhhcCChHHHHHHHHHHhhhch
Q 045774 149 --------VFRRMESNYESW---VAGFV----PMA-----LG---ADVPDMALQEFSRTLFSMRPDIALHVARTAFAADL 205 (275)
Q Consensus 149 --------~~~~~~~~~~~~---~~~~~----~~~-----~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 205 (275)
.+..++.+...| +..+. +.. .. .+.+.....++.+.++..+. .. ...+...+.
T Consensus 332 lpg~~m~~~F~~lrp~~l~w~~~v~~yl~g~~~~~fdll~Wn~D~t~lP~~~~~~~lr~ly~~N~-L~---~G~~~v~g~ 407 (532)
T TIGR01838 332 LDGRQMAVTFSLLRENDLIWNYYVDNYLKGKSPVPFDLLFWNSDSTNLPGKMHNFYLRNLYLQNA-LT---TGGLEVCGV 407 (532)
T ss_pred CCHHHHHHHHHhcChhhHHHHHHHHHHhcCCCccchhHHHHhccCccchHHHHHHHHHHHHhcCC-Cc---CCeeEECCE
Confidence 111111110000 00000 000 00 00111112222222221110 00 000111233
Q ss_pred HhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHHcCCCccEEEcCCCCCCCCCCChH
Q 045774 206 RHVLGLVRVPVCIIQSSVDLSVPPAVAEYMRRHLGGPTVLEFLPTHGHLPHVSSPA 261 (275)
Q Consensus 206 ~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~ 261 (275)
...+.+|++|+++|+|++|.++|++....+.+.+++ .+..+++++||++++|+|.
T Consensus 408 ~~dL~~I~vPvLvV~G~~D~IvP~~sa~~l~~~i~~-~~~~vL~~sGHi~~ienPp 462 (532)
T TIGR01838 408 RLDLSKVKVPVYIIATREDHIAPWQSAYRGAALLGG-PKTFVLGESGHIAGVVNPP 462 (532)
T ss_pred ecchhhCCCCEEEEeeCCCCcCCHHHHHHHHHHCCC-CEEEEECCCCCchHhhCCC
Confidence 456788999999999999999999999989999986 5677889999999999996
No 56
>PRK11071 esterase YqiA; Provisional
Probab=99.90 E-value=3.1e-22 Score=158.39 Aligned_cols=183 Identities=15% Similarity=0.044 Sum_probs=124.3
Q ss_pred ceEEEEcCCCCChhhhhh--hHHHhhc---CCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhCCCceEEE
Q 045774 25 SIIVFSHGFGSDQSVWSR--VIPSFTR---AYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALEIDRCAFV 99 (275)
Q Consensus 25 ~~ivllHG~~~~~~~w~~--~~~~l~~---~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lv 99 (275)
|+|||+|||+++...|+. +.+.+++ +|+|+++|+|||| +++++++.+++++++.+++++|
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~---------------~~~~~~l~~l~~~~~~~~~~lv 66 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP---------------ADAAELLESLVLEHGGDPLGLV 66 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH---------------HHHHHHHHHHHHHcCCCCeEEE
Confidence 579999999999999985 3455654 6999999999984 2478889999999999999999
Q ss_pred EeChhHHHHHHHHHhCCccccceeeecCCCCCcCCCCCcCCCCcchHHHHHHHHhhhhhhhhhhhcccccCCCCChHHHH
Q 045774 100 GHSVSAMIGLLAAIHRPNLFSRLILIGGSPRFTNDGNYIGGIDPAHMEEVFRRMESNYESWVAGFVPMALGADVPDMALQ 179 (275)
Q Consensus 100 GhS~GG~val~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (275)
||||||++++.+|.++|. ++|+++++... .+.+...+.... .+. ...... ..+
T Consensus 67 G~S~Gg~~a~~~a~~~~~---~~vl~~~~~~~--------------~~~~~~~~~~~~-------~~~-~~~~~~--~~~ 119 (190)
T PRK11071 67 GSSLGGYYATWLSQCFML---PAVVVNPAVRP--------------FELLTDYLGENE-------NPY-TGQQYV--LES 119 (190)
T ss_pred EECHHHHHHHHHHHHcCC---CEEEECCCCCH--------------HHHHHHhcCCcc-------ccc-CCCcEE--EcH
Confidence 999999999999999994 46777764320 011111000000 000 000000 001
Q ss_pred HHHHHhhcCChHHHHHHHHHHhhhchHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHHcCCCccEEEcCCCCCCCCCCC
Q 045774 180 EFSRTLFSMRPDIALHVARTAFAADLRHVLGLVRVPVCIIQSSVDLSVPPAVAEYMRRHLGGPTVLEFLPTHGHLPHVSS 259 (275)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~ 259 (275)
.+.+.+ ...+... +. .++|+++|+|++|+++|.+.+..+.+. ++.+++++++|.. +.
T Consensus 120 ~~~~d~---------------~~~~~~~-i~-~~~~v~iihg~~De~V~~~~a~~~~~~----~~~~~~~ggdH~f--~~ 176 (190)
T PRK11071 120 RHIYDL---------------KVMQIDP-LE-SPDLIWLLQQTGDEVLDYRQAVAYYAA----CRQTVEEGGNHAF--VG 176 (190)
T ss_pred HHHHHH---------------HhcCCcc-CC-ChhhEEEEEeCCCCcCCHHHHHHHHHh----cceEEECCCCcch--hh
Confidence 111111 1112222 33 678889999999999999999888773 3466789999966 66
Q ss_pred hHHHHHHHHHHHH
Q 045774 260 PAPVANAIQQLLR 272 (275)
Q Consensus 260 p~~~~~~i~~fl~ 272 (275)
.++..+.|.+|+.
T Consensus 177 ~~~~~~~i~~fl~ 189 (190)
T PRK11071 177 FERYFNQIVDFLG 189 (190)
T ss_pred HHHhHHHHHHHhc
Confidence 6889999999874
No 57
>PRK10566 esterase; Provisional
Probab=99.88 E-value=6.3e-21 Score=157.65 Aligned_cols=205 Identities=20% Similarity=0.263 Sum_probs=123.7
Q ss_pred ceEEEEcCCCCChhhhhhhHHHhhc-CCEEEEEccCCCCCCCCCCCC--ccc-ccchhHHHHHHHHHHHHh------CCC
Q 045774 25 SIIVFSHGFGSDQSVWSRVIPSFTR-AYRVISFDLMCSGSCDPTNYD--FQR-YATLDGYVDDLLSFLDAL------EID 94 (275)
Q Consensus 25 ~~ivllHG~~~~~~~w~~~~~~l~~-~~~via~Dl~G~G~S~~~~~~--~~~-~~~~~~~a~dl~~~l~~l------~~~ 94 (275)
|.||++||++++...|..+...|++ +|+|+++|+||||.|...... ... +..+..-.+|+.++++.+ +.+
T Consensus 28 p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 107 (249)
T PRK10566 28 PTVFFYHGFTSSKLVYSYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPTLRAAIREEGWLLDD 107 (249)
T ss_pred CEEEEeCCCCcccchHHHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHHHHHHHHhcCCcCcc
Confidence 6899999999999999999999876 699999999999986321100 000 001112234443434332 346
Q ss_pred ceEEEEeChhHHHHHHHHHhCCccccceeeecCCCCCcCCCCCcCCCCcchHHHHHHHHhhhhhhhhhhhcccccCCCCC
Q 045774 95 RCAFVGHSVSAMIGLLAAIHRPNLFSRLILIGGSPRFTNDGNYIGGIDPAHMEEVFRRMESNYESWVAGFVPMALGADVP 174 (275)
Q Consensus 95 ~~~lvGhS~GG~val~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (275)
+++++||||||.+++.++.++|+....++++++.. ........ +.+........
T Consensus 108 ~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~----------~~~~~~~~~~~ 161 (249)
T PRK10566 108 RLAVGGASMGGMTALGIMARHPWVKCVASLMGSGY----------------FTSLARTL----------FPPLIPETAAQ 161 (249)
T ss_pred ceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcHH----------------HHHHHHHh----------ccccccccccc
Confidence 89999999999999999999987444444433210 00000000 00000000000
Q ss_pred hHHHHHHHHHhhcCChHHHHHHHHHHhhhchHhhhCCC-CCcEEEEEeCCCCCCCHHHHHHHHHHcCCC-----ccEEEc
Q 045774 175 DMALQEFSRTLFSMRPDIALHVARTAFAADLRHVLGLV-RVPVCIIQSSVDLSVPPAVAEYMRRHLGGP-----TVLEFL 248 (275)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i-~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~-----~~~~~i 248 (275)
...+.... ......+....+.++ ++|+|+|+|++|..+|.+..+.+++.++.+ .++.++
T Consensus 162 ---~~~~~~~~------------~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~ 226 (249)
T PRK10566 162 ---QAEFNNIV------------APLAEWEVTHQLEQLADRPLLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCLWE 226 (249)
T ss_pred ---HHHHHHHH------------HHHhhcChhhhhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEEec
Confidence 01111000 001111223334555 799999999999999999988888766532 245678
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHhh
Q 045774 249 PTHGHLPHVSSPAPVANAIQQLLRRR 274 (275)
Q Consensus 249 ~~~gH~~~~e~p~~~~~~i~~fl~~~ 274 (275)
+++||... |+ ..+.+.+||++.
T Consensus 227 ~~~~H~~~---~~-~~~~~~~fl~~~ 248 (249)
T PRK10566 227 PGVRHRIT---PE-ALDAGVAFFRQH 248 (249)
T ss_pred CCCCCccC---HH-HHHHHHHHHHhh
Confidence 99999863 44 568888898764
No 58
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.88 E-value=7e-21 Score=165.06 Aligned_cols=241 Identities=15% Similarity=0.201 Sum_probs=140.6
Q ss_pred ceEEEEcCCCCChhhh-----hhhHHHhhc-CCEEEEEccCCCCCCCCCCCCcccccchhHHHHH-HH----HHHHHhCC
Q 045774 25 SIIVFSHGFGSDQSVW-----SRVIPSFTR-AYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDD-LL----SFLDALEI 93 (275)
Q Consensus 25 ~~ivllHG~~~~~~~w-----~~~~~~l~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~d-l~----~~l~~l~~ 93 (275)
+|||++||+..+...| +.+++.|.+ +|+|+++|++|+|.|+.. .++++++.+ +. .+.+..+.
T Consensus 63 ~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~-------~~~~d~~~~~~~~~v~~l~~~~~~ 135 (350)
T TIGR01836 63 TPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRY-------LTLDDYINGYIDKCVDYICRTSKL 135 (350)
T ss_pred CcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhc-------CCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4799999987666554 578888876 799999999999987421 246666543 43 44455678
Q ss_pred CceEEEEeChhHHHHHHHHHhCCccccceeeecCCCCCcCCCCCcCCCC-cchHHHHHHHHhhhhhhhh-----------
Q 045774 94 DRCAFVGHSVSAMIGLLAAIHRPNLFSRLILIGGSPRFTNDGNYIGGID-PAHMEEVFRRMESNYESWV----------- 161 (275)
Q Consensus 94 ~~~~lvGhS~GG~val~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----------- 161 (275)
++++++||||||++++.+++.+|++|+++|++++...+.........+. .............-+..+.
T Consensus 136 ~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~l~p~~ 215 (350)
T TIGR01836 136 DQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDFETPGNMLSNWARHVDIDLAVDTMGNIPGELLNLTFLMLKPFS 215 (350)
T ss_pred CcccEEEECHHHHHHHHHHHhCchheeeEEEeccccccCCCCchhhhhccccCHHHHHHhcCCCCHHHHHHHHHhcCcch
Confidence 8999999999999999999999999999999986543221111000000 0001111110000000000
Q ss_pred ---hhhcccccCCCCChHHHHHHHHH--hhcCC----hHHHHHHHHHHhhh-----------chHhhhCCCCCcEEEEEe
Q 045774 162 ---AGFVPMALGADVPDMALQEFSRT--LFSMR----PDIALHVARTAFAA-----------DLRHVLGLVRVPVCIIQS 221 (275)
Q Consensus 162 ---~~~~~~~~~~~~~~~~~~~~~~~--~~~~~----~~~~~~~~~~~~~~-----------d~~~~l~~i~~P~l~i~G 221 (275)
..+.... ......+..+.+.+. ..... ..........++.. +....+.++++|+++++|
T Consensus 216 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~w~~d~~~~~~~~~~~~~~~~~~~n~l~~g~~~~~~~~~~l~~i~~Pvliv~G 294 (350)
T TIGR01836 216 LGYQKYVNLV-DILEDERKVENFLRMEKWIFDSPDQAGEAFRQFVKDFYQQNGLINGEVEIGGRKVDLKNIKMPILNIYA 294 (350)
T ss_pred hhhHHHHHHH-HhcCChHHHHHHHHHHHHhcCCcCccHHHHHHHHHHHHhcCcccCCeeEECCEEccHHhCCCCeEEEec
Confidence 0000000 000011112222110 00100 11111111111111 111236688999999999
Q ss_pred CCCCCCCHHHHHHHHHHcCCC-ccEEEcCCCCCCCCCCCh---HHHHHHHHHHHHhh
Q 045774 222 SVDLSVPPAVAEYMRRHLGGP-TVLEFLPTHGHLPHVSSP---APVANAIQQLLRRR 274 (275)
Q Consensus 222 ~~D~~~~~~~~~~~~~~~~~~-~~~~~i~~~gH~~~~e~p---~~~~~~i~~fl~~~ 274 (275)
++|.++|++..+.+.+.+++. .++++++ +||..++..+ +++.+.|.+|+.++
T Consensus 295 ~~D~i~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~v~~~i~~wl~~~ 350 (350)
T TIGR01836 295 ERDHLVPPDASKALNDLVSSEDYTELSFP-GGHIGIYVSGKAQKEVPPAIGKWLQAR 350 (350)
T ss_pred CCCCcCCHHHHHHHHHHcCCCCeEEEEcC-CCCEEEEECchhHhhhhHHHHHHHHhC
Confidence 999999999888888888753 3456565 8999988765 78889999998764
No 59
>PRK13604 luxD acyl transferase; Provisional
Probab=99.86 E-value=4e-20 Score=153.77 Aligned_cols=205 Identities=17% Similarity=0.166 Sum_probs=124.6
Q ss_pred ceEEEEcCCCCChhhhhhhHHHhhc-CCEEEEEccCCC-CCCCCCCCCcccccchhHHHHHHHHHHHHh---CCCceEEE
Q 045774 25 SIIVFSHGFGSDQSVWSRVIPSFTR-AYRVISFDLMCS-GSCDPTNYDFQRYATLDGYVDDLLSFLDAL---EIDRCAFV 99 (275)
Q Consensus 25 ~~ivllHG~~~~~~~w~~~~~~l~~-~~~via~Dl~G~-G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l---~~~~~~lv 99 (275)
+.||++||++.+...+..++..|.+ +|.|+.+|.+|+ |.|+... .. .++....+|+.++++.+ +.+++.|+
T Consensus 38 ~~vIi~HGf~~~~~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~---~~-~t~s~g~~Dl~aaid~lk~~~~~~I~Li 113 (307)
T PRK13604 38 NTILIASGFARRMDHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTI---DE-FTMSIGKNSLLTVVDWLNTRGINNLGLI 113 (307)
T ss_pred CEEEEeCCCCCChHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCcc---cc-CcccccHHHHHHHHHHHHhcCCCceEEE
Confidence 5799999999998888899998876 799999999998 8985421 11 13334467775555544 56789999
Q ss_pred EeChhHHHHHHHHHhCCccccceeeecCCCCCcCCCCCcCCCCcchHHHHHH-HHhhhhhhhhhhhccc---ccCCCCCh
Q 045774 100 GHSVSAMIGLLAAIHRPNLFSRLILIGGSPRFTNDGNYIGGIDPAHMEEVFR-RMESNYESWVAGFVPM---ALGADVPD 175 (275)
Q Consensus 100 GhS~GG~val~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~ 175 (275)
||||||.+|+..|... +++.+|+.++.... ...+. .+...+..+.....+. ..+...
T Consensus 114 G~SmGgava~~~A~~~--~v~~lI~~sp~~~l---------------~d~l~~~~~~~~~~~p~~~lp~~~d~~g~~l-- 174 (307)
T PRK13604 114 AASLSARIAYEVINEI--DLSFLITAVGVVNL---------------RDTLERALGYDYLSLPIDELPEDLDFEGHNL-- 174 (307)
T ss_pred EECHHHHHHHHHhcCC--CCCEEEEcCCcccH---------------HHHHHHhhhcccccCcccccccccccccccc--
Confidence 9999999997776633 48888776543221 11111 0110000000000000 000000
Q ss_pred HHHHHHHHHhhcCChHHHHHHHHHHhhhchHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHHcC-CCccEEEcCCCCCC
Q 045774 176 MALQEFSRTLFSMRPDIALHVARTAFAADLRHVLGLVRVPVCIIQSSVDLSVPPAVAEYMRRHLG-GPTVLEFLPTHGHL 254 (275)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~ 254 (275)
..+.+.+.....+... .....+...++++|+|+|+|++|..+|.+.++.+.+.++ +.++++++++++|.
T Consensus 175 -~~~~f~~~~~~~~~~~---------~~s~i~~~~~l~~PvLiIHG~~D~lVp~~~s~~l~e~~~s~~kkl~~i~Ga~H~ 244 (307)
T PRK13604 175 -GSEVFVTDCFKHGWDT---------LDSTINKMKGLDIPFIAFTANNDSWVKQSEVIDLLDSIRSEQCKLYSLIGSSHD 244 (307)
T ss_pred -cHHHHHHHHHhcCccc---------cccHHHHHhhcCCCEEEEEcCCCCccCHHHHHHHHHHhccCCcEEEEeCCCccc
Confidence 0012222111111000 011224466788999999999999999999998888775 34689999999995
Q ss_pred CCCCChHHH
Q 045774 255 PHVSSPAPV 263 (275)
Q Consensus 255 ~~~e~p~~~ 263 (275)
..|++-.+
T Consensus 245 -l~~~~~~~ 252 (307)
T PRK13604 245 -LGENLVVL 252 (307)
T ss_pred -cCcchHHH
Confidence 44555433
No 60
>PLN02872 triacylglycerol lipase
Probab=99.85 E-value=1.1e-20 Score=164.57 Aligned_cols=250 Identities=14% Similarity=0.121 Sum_probs=141.9
Q ss_pred CceEEEEcCCCCChhhhhh------hHHHhhc-CCEEEEEccCCCCCCCC----CCCCccc-ccchhHHH-HHHHHHHHH
Q 045774 24 QSIIVFSHGFGSDQSVWSR------VIPSFTR-AYRVISFDLMCSGSCDP----TNYDFQR-YATLDGYV-DDLLSFLDA 90 (275)
Q Consensus 24 ~~~ivllHG~~~~~~~w~~------~~~~l~~-~~~via~Dl~G~G~S~~----~~~~~~~-~~~~~~~a-~dl~~~l~~ 90 (275)
+++|||+||+++++..|.. +...|++ +|+|+++|+||+|.|.. ...+... ..++++++ .|+.+++++
T Consensus 74 ~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~ 153 (395)
T PLN02872 74 GPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHY 153 (395)
T ss_pred CCeEEEeCcccccccceeecCcccchHHHHHhCCCCcccccccccccccCCCCCCccchhccCCcHHHHHHHHHHHHHHH
Confidence 4689999999999999842 3345665 79999999999886621 1111110 13688999 799999997
Q ss_pred h---CCCceEEEEeChhHHHHHHHHHhCCc---cccceeeecCCCCCcCCCCC-cCCCCcchHHHHHHHHhh-----h--
Q 045774 91 L---EIDRCAFVGHSVSAMIGLLAAIHRPN---LFSRLILIGGSPRFTNDGNY-IGGIDPAHMEEVFRRMES-----N-- 156 (275)
Q Consensus 91 l---~~~~~~lvGhS~GG~val~~a~~~p~---~v~~lvli~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-----~-- 156 (275)
+ ..+++++|||||||++++.++ .+|+ +|++++++++.......... ...+.......++..+.. .
T Consensus 154 i~~~~~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 232 (395)
T PLN02872 154 VYSITNSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCPISYLDHVTAPLVLRMVFMHLDQMVVAMGIHQLNFRSD 232 (395)
T ss_pred HHhccCCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcchhhhccCCCHHHHHHHHHhHHHHHHHhcCceecCCcH
Confidence 6 347899999999999998544 6887 57777777654321110000 000000000000000000 0
Q ss_pred -hhhhhhhhcc----------cccCC------------------CCChHHHHHHHHHhhcCCh---HHH--HHHHHHHhh
Q 045774 157 -YESWVAGFVP----------MALGA------------------DVPDMALQEFSRTLFSMRP---DIA--LHVARTAFA 202 (275)
Q Consensus 157 -~~~~~~~~~~----------~~~~~------------------~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~~ 202 (275)
.......++. ...+. .-+...+.++.+...+.+. +.. .+....-..
T Consensus 233 ~~~~~~~~~C~~~~~c~~~~~~~~g~~~~~n~~~~~~~~~~~pagtS~k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~~ 312 (395)
T PLN02872 233 VLVKLLDSICEGHMDCNDLLTSITGTNCCFNASRIDYYLEYEPHPSSVKNLRHLFQMIRKGTFAHYDYGIFKNLKLYGQV 312 (395)
T ss_pred HHHHHHHHHccCchhHHHHHHHHhCCCcccchhhhhHHHhcCCCcchHHHHHHHHHHHhcCCcccCCCCchhhHHHhCCC
Confidence 0000000000 00000 0011112233322211110 000 000000000
Q ss_pred hchHhhhCCC--CCcEEEEEeCCCCCCCHHHHHHHHHHcCCCccEEEcCCCCCC---CCCCChHHHHHHHHHHHHhh
Q 045774 203 ADLRHVLGLV--RVPVCIIQSSVDLSVPPAVAEYMRRHLGGPTVLEFLPTHGHL---PHVSSPAPVANAIQQLLRRR 274 (275)
Q Consensus 203 ~d~~~~l~~i--~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~---~~~e~p~~~~~~i~~fl~~~ 274 (275)
....=.+.++ ++|+++++|++|.+++++..+++.+.+++..+++.++++||+ ...|+|+++.+.|.+|+++.
T Consensus 313 ~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~~~~l~~l~~~gH~dfi~~~eape~V~~~Il~fL~~~ 389 (395)
T PLN02872 313 NPPAFDLSLIPKSLPLWMGYGGTDGLADVTDVEHTLAELPSKPELLYLENYGHIDFLLSTSAKEDVYNHMIQFFRSL 389 (395)
T ss_pred CCCCcCcccCCCCccEEEEEcCCCCCCCHHHHHHHHHHCCCccEEEEcCCCCCHHHHhCcchHHHHHHHHHHHHHHh
Confidence 0001124556 689999999999999998888888888874578889999995 45599999999999999753
No 61
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.85 E-value=1.8e-19 Score=175.01 Aligned_cols=243 Identities=17% Similarity=0.184 Sum_probs=142.3
Q ss_pred ceEEEEcCCCCChhhhhhh-----HHHhhc-CCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHH---hCCCc
Q 045774 25 SIIVFSHGFGSDQSVWSRV-----IPSFTR-AYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDA---LEIDR 95 (275)
Q Consensus 25 ~~ivllHG~~~~~~~w~~~-----~~~l~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~---l~~~~ 95 (275)
+|||||||++.+...|+.+ ++.|.+ +|+|+++| +|.|++.... . ..++.+++..+.+.++. +..++
T Consensus 68 ~plllvhg~~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d---~G~~~~~~~~-~-~~~l~~~i~~l~~~l~~v~~~~~~~ 142 (994)
T PRK07868 68 PPVLMVHPMMMSADMWDVTRDDGAVGILHRAGLDPWVID---FGSPDKVEGG-M-ERNLADHVVALSEAIDTVKDVTGRD 142 (994)
T ss_pred CcEEEECCCCCCccceecCCcccHHHHHHHCCCEEEEEc---CCCCChhHcC-c-cCCHHHHHHHHHHHHHHHHHhhCCc
Confidence 6899999999999999976 787865 69999999 4666532111 1 13677777777666664 34578
Q ss_pred eEEEEeChhHHHHHHHHHhC-CccccceeeecCCCCCcCCC--CCcCC-------CC----------cchH-HHHHHHHh
Q 045774 96 CAFVGHSVSAMIGLLAAIHR-PNLFSRLILIGGSPRFTNDG--NYIGG-------ID----------PAHM-EEVFRRME 154 (275)
Q Consensus 96 ~~lvGhS~GG~val~~a~~~-p~~v~~lvli~~~~~~~~~~--~~~~~-------~~----------~~~~-~~~~~~~~ 154 (275)
++||||||||++++.+++.+ |++|+++|++++...+.... ..... +. +... ...+..+.
T Consensus 143 v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~ 222 (994)
T PRK07868 143 VHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTLAALPMGIPAGLAAAAADFMADHVFNRLDIPGWMARTGFQMLD 222 (994)
T ss_pred eEEEEEChhHHHHHHHHHhcCCCccceEEEEecccccCCCCcccchhhhhhcccccchhhhhhcCCCCHHHHHHHHHhcC
Confidence 99999999999999888755 56999999987654321110 00000 00 0000 00011110
Q ss_pred hh--hhhhhhhhcccccCCC--CChHHHHHHHHHh-h-cCChHHHHHHHHHHhhh--------ch---HhhhCCCCCcEE
Q 045774 155 SN--YESWVAGFVPMALGAD--VPDMALQEFSRTL-F-SMRPDIALHVARTAFAA--------DL---RHVLGLVRVPVC 217 (275)
Q Consensus 155 ~~--~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~--------d~---~~~l~~i~~P~l 217 (275)
.. ...+ ..+........ .+++....+.+.. + ...........+.+... .. ...+.+|++|+|
T Consensus 223 p~~~~~~~-~~~~~~l~~~~~~~~~e~~~~~~~~~~w~~~~g~~~~~~~~~~~~~n~~~~g~~~~~~~~~~L~~i~~P~L 301 (994)
T PRK07868 223 PVKTAKAR-VDFLRQLHDREALLPREQQRRFLESEGWIAWSGPAISELLKQFIAHNRMMTGGFAINGQMVTLADITCPVL 301 (994)
T ss_pred hhHHHHHH-HHHHHhcCchhhhccchhhHhHHHHhhccccchHHHHHHHHHHHHhCcccCceEEECCEEcchhhCCCCEE
Confidence 00 0000 00111111110 0111112222211 1 11111222222222110 01 124789999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHcCCCccE-EEcCCCCCCCCCC---ChHHHHHHHHHHHHhh
Q 045774 218 IIQSSVDLSVPPAVAEYMRRHLGGPTVL-EFLPTHGHLPHVS---SPAPVANAIQQLLRRR 274 (275)
Q Consensus 218 ~i~G~~D~~~~~~~~~~~~~~~~~~~~~-~~i~~~gH~~~~e---~p~~~~~~i~~fl~~~ 274 (275)
+|+|++|.++|++..+.+.+.+++ +++ +++++|||+.++- .|+++-..|.+||..+
T Consensus 302 ~i~G~~D~ivp~~~~~~l~~~i~~-a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~~ 361 (994)
T PRK07868 302 AFVGEVDDIGQPASVRGIRRAAPN-AEVYESLIRAGHFGLVVGSRAAQQTWPTVADWVKWL 361 (994)
T ss_pred EEEeCCCCCCCHHHHHHHHHhCCC-CeEEEEeCCCCCEeeeechhhhhhhChHHHHHHHHh
Confidence 999999999999999999999987 455 6779999997664 4566777888888754
No 62
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.85 E-value=2.6e-20 Score=148.76 Aligned_cols=230 Identities=21% Similarity=0.296 Sum_probs=134.4
Q ss_pred ceEEEEcCCCCChhhhhhhHHHhhc--CCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHh---CCCceEEE
Q 045774 25 SIIVFSHGFGSDQSVWSRVIPSFTR--AYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDAL---EIDRCAFV 99 (275)
Q Consensus 25 ~~ivllHG~~~~~~~w~~~~~~l~~--~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l---~~~~~~lv 99 (275)
|.++|+||.+.+.-.|..+...+.. .-+|+|+|+||||.|...+ ..+ -+.+.+++|+.++++.+ ...+++||
T Consensus 75 pil~l~HG~G~S~LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~--e~d-lS~eT~~KD~~~~i~~~fge~~~~iilV 151 (343)
T KOG2564|consen 75 PILLLLHGGGSSALSFAIFASELKSKIRCRCLALDLRGHGETKVEN--EDD-LSLETMSKDFGAVIKELFGELPPQIILV 151 (343)
T ss_pred cEEEEeecCcccchhHHHHHHHHHhhcceeEEEeeccccCccccCC--hhh-cCHHHHHHHHHHHHHHHhccCCCceEEE
Confidence 6899999999999999999999877 4788999999999996432 122 37999999999999988 24579999
Q ss_pred EeChhHHHHHHHHHh--CCccccceeeecCCCCCcCCCCCcCCCCcchHHHHHHHHhhhhhh---------h-hh-hhcc
Q 045774 100 GHSVSAMIGLLAAIH--RPNLFSRLILIGGSPRFTNDGNYIGGIDPAHMEEVFRRMESNYES---------W-VA-GFVP 166 (275)
Q Consensus 100 GhS~GG~val~~a~~--~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~-~~-~~~~ 166 (275)
||||||.||...|.. -|. +.++++||..-.. ....+..+...+...+.. | +. +..+
T Consensus 152 GHSmGGaIav~~a~~k~lps-l~Gl~viDVVEgt----------AmeAL~~m~~fL~~rP~~F~Si~~Ai~W~v~sg~~R 220 (343)
T KOG2564|consen 152 GHSMGGAIAVHTAASKTLPS-LAGLVVIDVVEGT----------AMEALNSMQHFLRNRPKSFKSIEDAIEWHVRSGQLR 220 (343)
T ss_pred eccccchhhhhhhhhhhchh-hhceEEEEEechH----------HHHHHHHHHHHHhcCCccccchhhHHHHHhcccccc
Confidence 999999999876543 465 8999999742110 000011111111111111 0 00 0000
Q ss_pred cccCCCCCh-HHHHHHHHH-hhcCChHH--HHHHHHHHhhhchHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHHcCCC
Q 045774 167 MALGADVPD-MALQEFSRT-LFSMRPDI--ALHVARTAFAADLRHVLGLVRVPVCIIQSSVDLSVPPAVAEYMRRHLGGP 242 (275)
Q Consensus 167 ~~~~~~~~~-~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~d~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~ 242 (275)
...++..+- ..+++.... .+..+-+. ...+... +-.++.+.+-...+|.++|....|..= .+.. + -+..+.
T Consensus 221 n~~SArVsmP~~~~~~~eGh~yvwrtdL~kte~YW~g-WF~gLS~~Fl~~p~~klLilAg~d~LD-kdLt--i-GQMQGk 295 (343)
T KOG2564|consen 221 NRDSARVSMPSQLKQCEEGHCYVWRTDLEKTEQYWKG-WFKGLSDKFLGLPVPKLLILAGVDRLD-KDLT--I-GQMQGK 295 (343)
T ss_pred ccccceEecchheeeccCCCcEEEEeeccccchhHHH-HHhhhhhHhhCCCccceeEEecccccC-ccee--e-eeeccc
Confidence 000000000 000000000 00000000 0000000 111233444457888887777766432 1110 0 123344
Q ss_pred ccEEEcCCCCCCCCCCChHHHHHHHHHHHHh
Q 045774 243 TVLEFLPTHGHLPHVSSPAPVANAIQQLLRR 273 (275)
Q Consensus 243 ~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 273 (275)
.++.+++.|||++|.+.|..++..+..|+.+
T Consensus 296 ~Q~~vL~~~GH~v~ED~P~kva~~~~~f~~R 326 (343)
T KOG2564|consen 296 FQLQVLPLCGHFVHEDSPHKVAECLCVFWIR 326 (343)
T ss_pred eeeeeecccCceeccCCcchHHHHHHHHHhh
Confidence 5788999999999999999999999999865
No 63
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.81 E-value=1e-18 Score=132.23 Aligned_cols=144 Identities=25% Similarity=0.461 Sum_probs=109.8
Q ss_pred eEEEEcCCCCChhhhhhhHHHhhc-CCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhCCCceEEEEeChh
Q 045774 26 IIVFSHGFGSDQSVWSRVIPSFTR-AYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALEIDRCAFVGHSVS 104 (275)
Q Consensus 26 ~ivllHG~~~~~~~w~~~~~~l~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~G 104 (275)
+|||+||++.+...|..+...|++ +|.|+++|+|++|.+.. ....+.+.+++. .+..+.+++.++|||+|
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~-------~~~~~~~~~~~~--~~~~~~~~i~l~G~S~G 71 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEALAEQGYAVVAFDYPGHGDSDG-------ADAVERVLADIR--AGYPDPDRIILIGHSMG 71 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHHHHTTEEEEEESCTTSTTSHH-------SHHHHHHHHHHH--HHHCTCCEEEEEEETHH
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEecCCCCccch-------hHHHHHHHHHHH--hhcCCCCcEEEEEEccC
Confidence 589999999999999999998877 69999999999997621 012333333332 11236789999999999
Q ss_pred HHHHHHHHHhCCccccceeeecCCCCCcCCCCCcCCCCcchHHHHHHHHhhhhhhhhhhhcccccCCCCChHHHHHHHHH
Q 045774 105 AMIGLLAAIHRPNLFSRLILIGGSPRFTNDGNYIGGIDPAHMEEVFRRMESNYESWVAGFVPMALGADVPDMALQEFSRT 184 (275)
Q Consensus 105 G~val~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (275)
|.+++.++.++ .+++++|++++.+.
T Consensus 72 g~~a~~~~~~~-~~v~~~v~~~~~~~------------------------------------------------------ 96 (145)
T PF12695_consen 72 GAIAANLAARN-PRVKAVVLLSPYPD------------------------------------------------------ 96 (145)
T ss_dssp HHHHHHHHHHS-TTESEEEEESESSG------------------------------------------------------
T ss_pred cHHHHHHhhhc-cceeEEEEecCccc------------------------------------------------------
Confidence 99999999988 79999999865100
Q ss_pred hhcCChHHHHHHHHHHhhhchHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHHcCCCccEEEcCCCCCC
Q 045774 185 LFSMRPDIALHVARTAFAADLRHVLGLVRVPVCIIQSSVDLSVPPAVAEYMRRHLGGPTVLEFLPTHGHL 254 (275)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~ 254 (275)
.+.+...++|+++++|++|..+|.+..+.+.+.++...++..+++++|+
T Consensus 97 ---------------------~~~~~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 97 ---------------------SEDLAKIRIPVLFIHGENDPLVPPEQVRRLYEALPGPKELYIIPGAGHF 145 (145)
T ss_dssp ---------------------CHHHTTTTSEEEEEEETT-SSSHHHHHHHHHHHHCSSEEEEEETTS-TT
T ss_pred ---------------------hhhhhccCCcEEEEEECCCCcCCHHHHHHHHHHcCCCcEEEEeCCCcCc
Confidence 0001233459999999999999999888888888865689999999996
No 64
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.79 E-value=2.3e-17 Score=134.68 Aligned_cols=248 Identities=17% Similarity=0.163 Sum_probs=146.8
Q ss_pred hhhhceEEecC---CCceEEEEcCCCCChhh-hhhhH-----HHhhcCCEEEEEccCCCCCCCCCCCCcccccchhHHHH
Q 045774 12 LEALNVRVVGQ---GQSIIVFSHGFGSDQSV-WSRVI-----PSFTRAYRVISFDLMCSGSCDPTNYDFQRYATLDGYVD 82 (275)
Q Consensus 12 ~~~~~~~~~g~---g~~~ivllHG~~~~~~~-w~~~~-----~~l~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~ 82 (275)
.+.++|.+.|+ .+|+||=.|-.|.+... |..+. ..+.++|.|+-+|.||+..-.+..++.-.|.|++++|+
T Consensus 8 ~G~v~V~v~G~~~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~~f~i~Hi~aPGqe~ga~~~p~~y~yPsmd~LAe 87 (283)
T PF03096_consen 8 YGSVHVTVQGDPKGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQNFCIYHIDAPGQEEGAATLPEGYQYPSMDQLAE 87 (283)
T ss_dssp TEEEEEEEESS--TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHTTSEEEEEE-TTTSTT-----TT-----HHHHHC
T ss_pred ceEEEEEEEecCCCCCceEEEeccccccchHHHHHHhcchhHHHHhhceEEEEEeCCCCCCCcccccccccccCHHHHHH
Confidence 56788999886 25789999999998866 77654 56777899999999999865432222223668999999
Q ss_pred HHHHHHHHhCCCceEEEEeChhHHHHHHHHHhCCccccceeeecCCCCCcCCCC-----------CcCCCCcchHHHHHH
Q 045774 83 DLLSFLDALEIDRCAFVGHSVSAMIGLLAAIHRPNLFSRLILIGGSPRFTNDGN-----------YIGGIDPAHMEEVFR 151 (275)
Q Consensus 83 dl~~~l~~l~~~~~~lvGhS~GG~val~~a~~~p~~v~~lvli~~~~~~~~~~~-----------~~~~~~~~~~~~~~~ 151 (275)
++.+++++++++.++-+|--.|+.|-.++|..||+||.++||+++.+....+.. +..++++...+.+..
T Consensus 88 ~l~~Vl~~f~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~gw~Ew~~~K~~~~~L~~~gmt~~~~d~Ll~ 167 (283)
T PF03096_consen 88 MLPEVLDHFGLKSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAGWMEWFYQKLSSWLLYSYGMTSSVKDYLLW 167 (283)
T ss_dssp THHHHHHHHT---EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S---HHHHHHHHHH-------CTTS-HHHHHHH
T ss_pred HHHHHHHhCCccEEEEEeeccchhhhhhccccCccceeEEEEEecCCCCccHHHHHHHHHhcccccccccccchHHhhhh
Confidence 999999999999999999999999999999999999999999987543110000 000111110010000
Q ss_pred HHhhhhhhhhhhhcccccCCCCChHHHHHHHHHhhc-CChHHHHHHHH-HHhhhchHhhhCCCCCcEEEEEeCCCCCCCH
Q 045774 152 RMESNYESWVAGFVPMALGADVPDMALQEFSRTLFS-MRPDIALHVAR-TAFAADLRHVLGLVRVPVCIIQSSVDLSVPP 229 (275)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~d~~~~l~~i~~P~l~i~G~~D~~~~~ 229 (275)
. .|....... ..+.++.+.+.+.. .++.....+.. ...+.|+....+...||+|++.|+.++..
T Consensus 168 h----------~Fg~~~~~~--n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R~DL~~~~~~~~c~vLlvvG~~Sp~~-- 233 (283)
T PF03096_consen 168 H----------YFGKEEEEN--NSDLVQTYRQHLDERINPKNLALFLNSYNSRTDLSIERPSLGCPVLLVVGDNSPHV-- 233 (283)
T ss_dssp H----------HS-HHHHHC--T-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-----SECTTCCS-EEEEEETTSTTH--
T ss_pred c----------ccccccccc--cHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccchhhcCCCCCCeEEEEecCCcch--
Confidence 0 000000001 11235566665543 33333333333 33466777777888899999999998764
Q ss_pred HHHHHHHHHcC-CCccEEEcCCCCCCCCCCChHHHHHHHHHHHHh
Q 045774 230 AVAEYMRRHLG-GPTVLEFLPTHGHLPHVSSPAPVANAIQQLLRR 273 (275)
Q Consensus 230 ~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 273 (275)
+....+...+. ..+++.-+++||=++..|+|+.+++.++=|+.+
T Consensus 234 ~~vv~~ns~Ldp~~ttllkv~dcGglV~eEqP~klaea~~lFlQG 278 (283)
T PF03096_consen 234 DDVVEMNSKLDPTKTTLLKVADCGGLVLEEQPGKLAEAFKLFLQG 278 (283)
T ss_dssp HHHHHHHHHS-CCCEEEEEETT-TT-HHHH-HHHHHHHHHHHHHH
T ss_pred hhHHHHHhhcCcccceEEEecccCCcccccCcHHHHHHHHHHHcc
Confidence 34445666653 335677789999999999999999999999975
No 65
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.77 E-value=2.4e-18 Score=142.17 Aligned_cols=100 Identities=18% Similarity=0.245 Sum_probs=81.5
Q ss_pred ceEEEEcCCCCC----hhhhhhhHHHhhc-CCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHH---HHHhCCCce
Q 045774 25 SIIVFSHGFGSD----QSVWSRVIPSFTR-AYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSF---LDALEIDRC 96 (275)
Q Consensus 25 ~~ivllHG~~~~----~~~w~~~~~~l~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~---l~~l~~~~~ 96 (275)
++|||+||++.+ ...|..+++.|++ +|+|+++|+||||.|+... .. .+++.+++|+.++ +++.+.+++
T Consensus 26 ~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~---~~-~~~~~~~~Dv~~ai~~L~~~~~~~v 101 (266)
T TIGR03101 26 GVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDF---AA-ARWDVWKEDVAAAYRWLIEQGHPPV 101 (266)
T ss_pred eEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCcc---cc-CCHHHHHHHHHHHHHHHHhcCCCCE
Confidence 579999999864 4567778888875 7999999999999996321 11 2577888887765 445567899
Q ss_pred EEEEeChhHHHHHHHHHhCCccccceeeecCC
Q 045774 97 AFVGHSVSAMIGLLAAIHRPNLFSRLILIGGS 128 (275)
Q Consensus 97 ~lvGhS~GG~val~~a~~~p~~v~~lvli~~~ 128 (275)
+|+||||||.+++.+|.++|++++++|++++.
T Consensus 102 ~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~ 133 (266)
T TIGR03101 102 TLWGLRLGALLALDAANPLAAKCNRLVLWQPV 133 (266)
T ss_pred EEEEECHHHHHHHHHHHhCccccceEEEeccc
Confidence 99999999999999999999999999999753
No 66
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.76 E-value=9.7e-17 Score=129.40 Aligned_cols=253 Identities=17% Similarity=0.210 Sum_probs=162.3
Q ss_pred hhhhceEEecC---CCceEEEEcCCCCChhh-hhhh-----HHHhhcCCEEEEEccCCCCCCCCCCCCcccccchhHHHH
Q 045774 12 LEALNVRVVGQ---GQSIIVFSHGFGSDQSV-WSRV-----IPSFTRAYRVISFDLMCSGSCDPTNYDFQRYATLDGYVD 82 (275)
Q Consensus 12 ~~~~~~~~~g~---g~~~ivllHG~~~~~~~-w~~~-----~~~l~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~ 82 (275)
.+.+||.+.|. ++|.|+=.|.++.+... |..+ +..+.++|.|+.+|-|||-.-.+.-+..-.|.|++++|+
T Consensus 31 ~G~v~V~V~Gd~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~fcv~HV~~PGqe~gAp~~p~~y~yPsmd~LAd 110 (326)
T KOG2931|consen 31 HGVVHVTVYGDPKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEHFCVYHVDAPGQEDGAPSFPEGYPYPSMDDLAD 110 (326)
T ss_pred cccEEEEEecCCCCCCceEEEecccccchHhHhHHhhcCHhHHHHHhheEEEecCCCccccCCccCCCCCCCCCHHHHHH
Confidence 36688888885 24678889999998866 7654 345666799999999999655443222223568999999
Q ss_pred HHHHHHHHhCCCceEEEEeChhHHHHHHHHHhCCccccceeeecCCCCCcCCCCCcCCCCcchHHH-HHH--HHhhhhhh
Q 045774 83 DLLSFLDALEIDRCAFVGHSVSAMIGLLAAIHRPNLFSRLILIGGSPRFTNDGNYIGGIDPAHMEE-VFR--RMESNYES 159 (275)
Q Consensus 83 dl~~~l~~l~~~~~~lvGhS~GG~val~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~ 159 (275)
++..++++++++.++-+|---|+.|-.++|..||+||-+||||+..+....+..| ...++.. .+. .+......
T Consensus 111 ~l~~VL~~f~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a~gwiew----~~~K~~s~~l~~~Gmt~~~~d 186 (326)
T KOG2931|consen 111 MLPEVLDHFGLKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCAKGWIEW----AYNKVSSNLLYYYGMTQGVKD 186 (326)
T ss_pred HHHHHHHhcCcceEEEecccccHHHHHHHHhcChhheeEEEEEecCCCCchHHHH----HHHHHHHHHHHhhchhhhHHH
Confidence 9999999999999999999999999999999999999999999875532111000 0000000 000 00000000
Q ss_pred hhhhhcccccCCC---CChHHHHHHHHHhhc-CChHHHHHHH-HHHhhhchHhhhC----CCCCcEEEEEeCCCCCCCHH
Q 045774 160 WVAGFVPMALGAD---VPDMALQEFSRTLFS-MRPDIALHVA-RTAFAADLRHVLG----LVRVPVCIIQSSVDLSVPPA 230 (275)
Q Consensus 160 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~d~~~~l~----~i~~P~l~i~G~~D~~~~~~ 230 (275)
+ +....++.. .+...++.+.+.+.. .++.....+. ....+.|+....+ .++||++++.|++++.+.
T Consensus 187 ~---ll~H~Fg~e~~~~~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn~R~DL~~~r~~~~~tlkc~vllvvGd~Sp~~~-- 261 (326)
T KOG2931|consen 187 Y---LLAHHFGKEELGNNSDIVQEYRQHLGERLNPKNLALFLNAYNGRRDLSIERPKLGTTLKCPVLLVVGDNSPHVS-- 261 (326)
T ss_pred H---HHHHHhccccccccHHHHHHHHHHHHhcCChhHHHHHHHHhcCCCCccccCCCcCccccccEEEEecCCCchhh--
Confidence 0 011111111 122334555554432 2333222222 2223455443332 566999999999987653
Q ss_pred HHHHHHHHc-CCCccEEEcCCCCCCCCCCChHHHHHHHHHHHHh
Q 045774 231 VAEYMRRHL-GGPTVLEFLPTHGHLPHVSSPAPVANAIQQLLRR 273 (275)
Q Consensus 231 ~~~~~~~~~-~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 273 (275)
....+...+ |..+.+..+.+||=.+..|+|..+++.++-|+.+
T Consensus 262 ~vv~~n~~Ldp~~ttllk~~d~g~l~~e~qP~kl~ea~~~FlqG 305 (326)
T KOG2931|consen 262 AVVECNSKLDPTYTTLLKMADCGGLVQEEQPGKLAEAFKYFLQG 305 (326)
T ss_pred hhhhhhcccCcccceEEEEcccCCcccccCchHHHHHHHHHHcc
Confidence 233444444 3335677778999999999999999999999865
No 67
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.75 E-value=3.9e-16 Score=123.76 Aligned_cols=220 Identities=17% Similarity=0.167 Sum_probs=140.5
Q ss_pred eEEEEcCCCCChhhhhhhHHHhhcCCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHH-HhCCCceEEEEeChh
Q 045774 26 IIVFSHGFGSDQSVWSRVIPSFTRAYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLD-ALEIDRCAFVGHSVS 104 (275)
Q Consensus 26 ~ivllHG~~~~~~~w~~~~~~l~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~-~l~~~~~~lvGhS~G 104 (275)
.++++|=-|+++..|+.....|.....++++.+||+|.--. ....++++.+|+.+..-+. -+-.+++.+.|||||
T Consensus 9 ~L~cfP~AGGsa~~fr~W~~~lp~~iel~avqlPGR~~r~~----ep~~~di~~Lad~la~el~~~~~d~P~alfGHSmG 84 (244)
T COG3208 9 RLFCFPHAGGSASLFRSWSRRLPADIELLAVQLPGRGDRFG----EPLLTDIESLADELANELLPPLLDAPFALFGHSMG 84 (244)
T ss_pred eEEEecCCCCCHHHHHHHHhhCCchhheeeecCCCcccccC----CcccccHHHHHHHHHHHhccccCCCCeeecccchh
Confidence 58889988999999999988888889999999999996411 1223579999999998888 455578999999999
Q ss_pred HHHHHHHHHhCCc---cccceeeecCCCCCcCCCCCcCCCCcchHHHHHHHHhhhhhhhhhhhcccccCCCCChHHHHHH
Q 045774 105 AMIGLLAAIHRPN---LFSRLILIGGSPRFTNDGNYIGGIDPAHMEEVFRRMESNYESWVAGFVPMALGADVPDMALQEF 181 (275)
Q Consensus 105 G~val~~a~~~p~---~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (275)
|++|.+.|.+.-. ....+.+.+..+............+.+.+.+.+..+...+.... .+ +.+
T Consensus 85 a~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~~i~~~~D~~~l~~l~~lgG~p~e~l------------ed---~El 149 (244)
T COG3208 85 AMLAFEVARRLERAGLPPRALFISGCRAPHYDRGKQIHHLDDADFLADLVDLGGTPPELL------------ED---PEL 149 (244)
T ss_pred HHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccCCccCCCHHHHHHHHHHhCCCChHHh------------cC---HHH
Confidence 9999999877432 25556555543321111011111111111111111111111100 00 111
Q ss_pred HHHhh-cCChHHHHHHHHHHhhhchHh-hhCCCCCcEEEEEeCCCCCCCHHHHHHHHHHcCCCccEEEcCCCCCCCCCCC
Q 045774 182 SRTLF-SMRPDIALHVARTAFAADLRH-VLGLVRVPVCIIQSSVDLSVPPAVAEYMRRHLGGPTVLEFLPTHGHLPHVSS 259 (275)
Q Consensus 182 ~~~~~-~~~~~~~~~~~~~~~~~d~~~-~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~ 259 (275)
.+.+. ..+.+.. ....++- .-..++||+..+.|++|..++.+.....++...+..++.+++ +||+...++
T Consensus 150 ~~l~LPilRAD~~-------~~e~Y~~~~~~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~~~f~l~~fd-GgHFfl~~~ 221 (244)
T COG3208 150 MALFLPILRADFR-------ALESYRYPPPAPLACPIHAFGGEKDHEVSRDELGAWREHTKGDFTLRVFD-GGHFFLNQQ 221 (244)
T ss_pred HHHHHHHHHHHHH-------HhcccccCCCCCcCcceEEeccCcchhccHHHHHHHHHhhcCCceEEEec-Ccceehhhh
Confidence 11110 0011110 0001111 114689999999999999999888777777787656899997 699999999
Q ss_pred hHHHHHHHHHHHH
Q 045774 260 PAPVANAIQQLLR 272 (275)
Q Consensus 260 p~~~~~~i~~fl~ 272 (275)
.+++.+.|.+.+.
T Consensus 222 ~~~v~~~i~~~l~ 234 (244)
T COG3208 222 REEVLARLEQHLA 234 (244)
T ss_pred HHHHHHHHHHHhh
Confidence 9999999998874
No 68
>PRK11460 putative hydrolase; Provisional
Probab=99.74 E-value=1.4e-16 Score=130.11 Aligned_cols=177 Identities=16% Similarity=0.220 Sum_probs=114.8
Q ss_pred CCceEEEEcCCCCChhhhhhhHHHhhcC-CEEEEEccCCCCCCCC-------C--CCC-cccccchhHHHHHHHHHHH--
Q 045774 23 GQSIIVFSHGFGSDQSVWSRVIPSFTRA-YRVISFDLMCSGSCDP-------T--NYD-FQRYATLDGYVDDLLSFLD-- 89 (275)
Q Consensus 23 g~~~ivllHG~~~~~~~w~~~~~~l~~~-~~via~Dl~G~G~S~~-------~--~~~-~~~~~~~~~~a~dl~~~l~-- 89 (275)
..+.|||+||++++...|..+.+.|.+. +.+..++.+|...+.. . ... .....++....+.+.++++
T Consensus 15 ~~~~vIlLHG~G~~~~~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i~~~ 94 (232)
T PRK11460 15 AQQLLLLFHGVGDNPVAMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETVRYW 94 (232)
T ss_pred CCcEEEEEeCCCCChHHHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHHHHH
Confidence 4468999999999999999999999753 3444445555432210 0 000 0001122333333444333
Q ss_pred --HhCC--CceEEEEeChhHHHHHHHHHhCCccccceeeecCCCCCcCCCCCcCCCCcchHHHHHHHHhhhhhhhhhhhc
Q 045774 90 --ALEI--DRCAFVGHSVSAMIGLLAAIHRPNLFSRLILIGGSPRFTNDGNYIGGIDPAHMEEVFRRMESNYESWVAGFV 165 (275)
Q Consensus 90 --~l~~--~~~~lvGhS~GG~val~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (275)
++++ ++++|+|||+||++++.++.++|+.+.+++.+++... . .
T Consensus 95 ~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~---------~-----------------------~- 141 (232)
T PRK11460 95 QQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYA---------S-----------------------L- 141 (232)
T ss_pred HHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEeccccc---------c-----------------------c-
Confidence 3444 4799999999999999999999988887776543100 0 0
Q ss_pred ccccCCCCChHHHHHHHHHhhcCChHHHHHHHHHHhhhchHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHHcCC---C
Q 045774 166 PMALGADVPDMALQEFSRTLFSMRPDIALHVARTAFAADLRHVLGLVRVPVCIIQSSVDLSVPPAVAEYMRRHLGG---P 242 (275)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~---~ 242 (275)
+ . ....++|+++++|++|.++|.+..+.+.+.+.. .
T Consensus 142 ~--------~---------------------------------~~~~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~ 180 (232)
T PRK11460 142 P--------E---------------------------------TAPTATTIHLIHGGEDPVIDVAHAVAAQEALISLGGD 180 (232)
T ss_pred c--------c---------------------------------cccCCCcEEEEecCCCCccCHHHHHHHHHHHHHCCCC
Confidence 0 0 001368999999999999999988877776542 2
Q ss_pred ccEEEcCCCCCCCCCCChHHHHHHHHHHHHh
Q 045774 243 TVLEFLPTHGHLPHVSSPAPVANAIQQLLRR 273 (275)
Q Consensus 243 ~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 273 (275)
.+.++++++||.+.-+.-+.+.+.|++++..
T Consensus 181 ~~~~~~~~~gH~i~~~~~~~~~~~l~~~l~~ 211 (232)
T PRK11460 181 VTLDIVEDLGHAIDPRLMQFALDRLRYTVPK 211 (232)
T ss_pred eEEEEECCCCCCCCHHHHHHHHHHHHHHcch
Confidence 3567779999998766666666666666543
No 69
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.73 E-value=1.2e-16 Score=127.57 Aligned_cols=186 Identities=14% Similarity=0.184 Sum_probs=128.7
Q ss_pred ceEEEEcCCCCChhhhhhhHHHhhc--CCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhC--CCceEEEE
Q 045774 25 SIIVFSHGFGSDQSVWSRVIPSFTR--AYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALE--IDRCAFVG 100 (275)
Q Consensus 25 ~~ivllHG~~~~~~~w~~~~~~l~~--~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~--~~~~~lvG 100 (275)
+.|+++||+..+......+.-.|.. +.+|+++|.+|+|.|.....+ .++.+.++.+.+.|.+-. .++++|.|
T Consensus 61 ~~lly~hGNa~Dlgq~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE----~n~y~Di~avye~Lr~~~g~~~~Iil~G 136 (258)
T KOG1552|consen 61 PTLLYSHGNAADLGQMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSE----RNLYADIKAVYEWLRNRYGSPERIILYG 136 (258)
T ss_pred eEEEEcCCcccchHHHHHHHHHHhhcccceEEEEecccccccCCCccc----ccchhhHHHHHHHHHhhcCCCceEEEEE
Confidence 5899999997777766666666666 689999999999999642111 134444555555555443 57899999
Q ss_pred eChhHHHHHHHHHhCCccccceeeecCCCCCcCCCCCcCCCCcchHHHHHHHHhhhhhhhhhhhcccccCCCCChHHHHH
Q 045774 101 HSVSAMIGLLAAIHRPNLFSRLILIGGSPRFTNDGNYIGGIDPAHMEEVFRRMESNYESWVAGFVPMALGADVPDMALQE 180 (275)
Q Consensus 101 hS~GG~val~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (275)
+|+|...++.+|.+.| +.++||.++..... ..+..... ..
T Consensus 137 ~SiGt~~tv~Lasr~~--~~alVL~SPf~S~~------------------rv~~~~~~------~~-------------- 176 (258)
T KOG1552|consen 137 QSIGTVPTVDLASRYP--LAAVVLHSPFTSGM------------------RVAFPDTK------TT-------------- 176 (258)
T ss_pred ecCCchhhhhHhhcCC--cceEEEeccchhhh------------------hhhccCcc------eE--------------
Confidence 9999999999999999 99999987532100 00000000 00
Q ss_pred HHHHhhcCChHHHHHHHHHHhhhchHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHHcCCCccEEEcCCCCCCCCCCCh
Q 045774 181 FSRTLFSMRPDIALHVARTAFAADLRHVLGLVRVPVCIIQSSVDLSVPPAVAEYMRRHLGGPTVLEFLPTHGHLPHVSSP 260 (275)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p 260 (275)
++-..+. ..+.++.|++|+|+|+|++|.+++......+.+..+++.+-.++.++||. -+|..
T Consensus 177 ~~~d~f~-----------------~i~kI~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~~~epl~v~g~gH~-~~~~~ 238 (258)
T KOG1552|consen 177 YCFDAFP-----------------NIEKISKITCPVLIIHGTDDEVVDFSHGKALYERCKEKVEPLWVKGAGHN-DIELY 238 (258)
T ss_pred Eeecccc-----------------ccCcceeccCCEEEEecccCceecccccHHHHHhccccCCCcEEecCCCc-ccccC
Confidence 0000000 02335678999999999999999999999999988875455567899995 45555
Q ss_pred HHHHHHHHHHHH
Q 045774 261 APVANAIQQLLR 272 (275)
Q Consensus 261 ~~~~~~i~~fl~ 272 (275)
.+..+.+.+|+.
T Consensus 239 ~~yi~~l~~f~~ 250 (258)
T KOG1552|consen 239 PEYIEHLRRFIS 250 (258)
T ss_pred HHHHHHHHHHHH
Confidence 566688888875
No 70
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.72 E-value=9.2e-17 Score=140.34 Aligned_cols=103 Identities=15% Similarity=0.215 Sum_probs=81.1
Q ss_pred CCceEEEEcCCCCCh--hhhhh-hHHHhh---cCCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHh-----
Q 045774 23 GQSIIVFSHGFGSDQ--SVWSR-VIPSFT---RAYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDAL----- 91 (275)
Q Consensus 23 g~~~ivllHG~~~~~--~~w~~-~~~~l~---~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l----- 91 (275)
..|++|+||||+.+. ..|.. +.+.|. .+++||++|++|+|.|.... .. ......++++.++++.|
T Consensus 40 ~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~---a~-~~t~~vg~~la~lI~~L~~~~g 115 (442)
T TIGR03230 40 ETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPT---SA-AYTKLVGKDVAKFVNWMQEEFN 115 (442)
T ss_pred CCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCcc---cc-ccHHHHHHHHHHHHHHHHHhhC
Confidence 347899999998754 56776 555553 26999999999999875321 11 13467778888888765
Q ss_pred -CCCceEEEEeChhHHHHHHHHHhCCccccceeeecCCC
Q 045774 92 -EIDRCAFVGHSVSAMIGLLAAIHRPNLFSRLILIGGSP 129 (275)
Q Consensus 92 -~~~~~~lvGhS~GG~val~~a~~~p~~v~~lvli~~~~ 129 (275)
++++++||||||||.||..++.++|++|.+++++|++.
T Consensus 116 l~l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAg 154 (442)
T TIGR03230 116 YPWDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAG 154 (442)
T ss_pred CCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCC
Confidence 36899999999999999999999999999999999864
No 71
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.71 E-value=1.4e-15 Score=117.41 Aligned_cols=204 Identities=20% Similarity=0.294 Sum_probs=131.4
Q ss_pred ecCCCceEEEEcCCCCCh--hhhhhhHHHhhc-CCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhCCC-c
Q 045774 20 VGQGQSIIVFSHGFGSDQ--SVWSRVIPSFTR-AYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALEID-R 95 (275)
Q Consensus 20 ~g~g~~~ivllHG~~~~~--~~w~~~~~~l~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~~-~ 95 (275)
.|+- ..+|++||+-++. .....++..|++ ++-+..+|++|.|.|+.+ .+ |......|+||..+++.+... +
T Consensus 30 tgs~-e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gs-f~---~Gn~~~eadDL~sV~q~~s~~nr 104 (269)
T KOG4667|consen 30 TGST-EIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGS-FY---YGNYNTEADDLHSVIQYFSNSNR 104 (269)
T ss_pred cCCc-eEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCc-cc---cCcccchHHHHHHHHHHhccCce
Confidence 3454 4899999997764 444556677776 799999999999999643 22 234566789999999998543 3
Q ss_pred --eEEEEeChhHHHHHHHHHhCCccccceeeecCCCCCcCCCCCcCCCCcchHHHHHHHHhhhhhhhhh--hhcccccC-
Q 045774 96 --CAFVGHSVSAMIGLLAAIHRPNLFSRLILIGGSPRFTNDGNYIGGIDPAHMEEVFRRMESNYESWVA--GFVPMALG- 170 (275)
Q Consensus 96 --~~lvGhS~GG~val~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~- 170 (275)
.+++|||=||-+++.+|.++++ +.-+|.+++....... +.+ .+...+..|.. +|......
T Consensus 105 ~v~vi~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRydl~~~-----------I~e---Rlg~~~l~~ike~Gfid~~~rk 169 (269)
T KOG4667|consen 105 VVPVILGHSKGGDVVLLYASKYHD-IRNVINCSGRYDLKNG-----------INE---RLGEDYLERIKEQGFIDVGPRK 169 (269)
T ss_pred EEEEEEeecCccHHHHHHHHhhcC-chheEEcccccchhcc-----------hhh---hhcccHHHHHHhCCceecCccc
Confidence 5789999999999999999998 7777666543211100 000 11111222211 22111110
Q ss_pred CCCChHHHHHHHHHhhcCChHHHHHHHHHHhhhchHhhhC--CCCCcEEEEEeCCCCCCCHHHHHHHHHHcCCCccEEEc
Q 045774 171 ADVPDMALQEFSRTLFSMRPDIALHVARTAFAADLRHVLG--LVRVPVCIIQSSVDLSVPPAVAEYMRRHLGGPTVLEFL 248 (275)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~--~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i 248 (275)
..+... ..++. .-...+.|+..... ..+||+|-++|.+|.++|.+.+.++++.+++ .++++|
T Consensus 170 G~y~~r-----------vt~eS----lmdrLntd~h~aclkId~~C~VLTvhGs~D~IVPve~AkefAk~i~n-H~L~iI 233 (269)
T KOG4667|consen 170 GKYGYR-----------VTEES----LMDRLNTDIHEACLKIDKQCRVLTVHGSEDEIVPVEDAKEFAKIIPN-HKLEII 233 (269)
T ss_pred CCcCce-----------ecHHH----HHHHHhchhhhhhcCcCccCceEEEeccCCceeechhHHHHHHhccC-CceEEe
Confidence 000000 00000 00112345544443 3589999999999999999999999999998 589999
Q ss_pred CCCCCCCCCCC
Q 045774 249 PTHGHLPHVSS 259 (275)
Q Consensus 249 ~~~gH~~~~e~ 259 (275)
|+|.|.--..+
T Consensus 234 EgADHnyt~~q 244 (269)
T KOG4667|consen 234 EGADHNYTGHQ 244 (269)
T ss_pred cCCCcCccchh
Confidence 99999755443
No 72
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.70 E-value=3.7e-15 Score=120.54 Aligned_cols=225 Identities=20% Similarity=0.260 Sum_probs=142.3
Q ss_pred eEEEEcCCCCChhhhhhhHHHhhc-CCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhCCC-ceEEEEeCh
Q 045774 26 IIVFSHGFGSDQSVWSRVIPSFTR-AYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALEID-RCAFVGHSV 103 (275)
Q Consensus 26 ~ivllHG~~~~~~~w~~~~~~l~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~~-~~~lvGhS~ 103 (275)
+||=+||-++|+..|+++.+.|.+ +.|+|.+.+||+|.++.. +...| +-.+-+.-+.++++.|+++ +.+.+|||.
T Consensus 37 TVv~~hGsPGSH~DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~--~~~~~-~n~er~~~~~~ll~~l~i~~~~i~~gHSr 113 (297)
T PF06342_consen 37 TVVAFHGSPGSHNDFKYIRPPLDEAGIRFIGINYPGFGFTPGY--PDQQY-TNEERQNFVNALLDELGIKGKLIFLGHSR 113 (297)
T ss_pred eEEEecCCCCCccchhhhhhHHHHcCeEEEEeCCCCCCCCCCC--ccccc-ChHHHHHHHHHHHHHcCCCCceEEEEecc
Confidence 799999999999999999999987 799999999999998642 11223 5788888999999999986 589999999
Q ss_pred hHHHHHHHHHhCCccccceeeecCCCCCcCCCCCcCCCCcchHHHHHHHHhhhhhhhhhhhcccccCCCCChHHHHHHHH
Q 045774 104 SAMIGLLAAIHRPNLFSRLILIGGSPRFTNDGNYIGGIDPAHMEEVFRRMESNYESWVAGFVPMALGADVPDMALQEFSR 183 (275)
Q Consensus 104 GG~val~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (275)
|+-.|+.+|..+| +.+++++++.+... . .+..+-..-+....+......+... ...-.+.+
T Consensus 114 Gcenal~la~~~~--~~g~~lin~~G~r~-H----kgIrp~~r~~~i~~l~~~lp~~~~~------------~i~~~~y~ 174 (297)
T PF06342_consen 114 GCENALQLAVTHP--LHGLVLINPPGLRP-H----KGIRPLSRMETINYLYDLLPRFIIN------------AIMYFYYR 174 (297)
T ss_pred chHHHHHHHhcCc--cceEEEecCCcccc-c----cCcCHHHHHHHHHHHHHHhhHHHHH------------HHHHHHHH
Confidence 9999999999996 67999998754211 1 1122211111111111100111100 00001111
Q ss_pred Hh-hc-CChHHHHHHHHHHhhhc------hHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHH-----------------
Q 045774 184 TL-FS-MRPDIALHVARTAFAAD------LRHVLGLVRVPVCIIQSSVDLSVPPAVAEYMRRH----------------- 238 (275)
Q Consensus 184 ~~-~~-~~~~~~~~~~~~~~~~d------~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~----------------- 238 (275)
.+ +. ...+.+.+..+.+...+ .-+.+.+-++|++++.|.+|.++-.+...++++.
T Consensus 175 ~iG~KV~~GeeA~na~r~m~~~df~~q~~~I~~ln~~~ikvli~ygg~DhLIEeeI~~E~a~~f~~l~Hf~~~~~~seee 254 (297)
T PF06342_consen 175 MIGFKVSDGEEAINAMRSMQNCDFEEQKEYIDKLNKKPIKVLIAYGGKDHLIEEEISFEFAMKFKGLDHFNIEKEISEEE 254 (297)
T ss_pred HhCeeecChHHHHHHHHHHHhcCHHHHHHHHHHhccCCCcEEEEEcCcchhhHHHHHHHHHHHhCCccceeeecCCChhH
Confidence 00 00 11222222222222222 2344556679999999999999876665554322
Q ss_pred -------cC-CC-ccEEEcCCCCCCCCCCChHHHHHHHHHHHH
Q 045774 239 -------LG-GP-TVLEFLPTHGHLPHVSSPAPVANAIQQLLR 272 (275)
Q Consensus 239 -------~~-~~-~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 272 (275)
+. +. ..-+.+.+.||+.+=.+++-+++.+...++
T Consensus 255 ~~kI~~~f~~~~~~~sv~f~~dgHf~qK~~A~lIA~~i~~mfe 297 (297)
T PF06342_consen 255 KPKILKSFASGQKGASVFFAKDGHFQQKFRADLIAEAIKKMFE 297 (297)
T ss_pred HHHHHHHHhcCCceeEEEEecCChHHhHHHHHHHHHHHHHhhC
Confidence 21 11 123345678999999999999998887653
No 73
>PLN02442 S-formylglutathione hydrolase
Probab=99.69 E-value=6.6e-15 Score=123.85 Aligned_cols=106 Identities=14% Similarity=0.194 Sum_probs=72.6
Q ss_pred CCceEEEEcCCCCChhhhhhh---HHHhhc-CCEEEEEccCCCCC-----CCC---C-------CCCcc-----ccc--c
Q 045774 23 GQSIIVFSHGFGSDQSVWSRV---IPSFTR-AYRVISFDLMCSGS-----CDP---T-------NYDFQ-----RYA--T 76 (275)
Q Consensus 23 g~~~ivllHG~~~~~~~w~~~---~~~l~~-~~~via~Dl~G~G~-----S~~---~-------~~~~~-----~~~--~ 76 (275)
+-|+|+|+||++++...|... ...+.. ++.|+.+|.+++|. ++. . +.... .+. -
T Consensus 46 ~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (283)
T PLN02442 46 KVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWRMYDYV 125 (283)
T ss_pred CCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcceeeccccCCCcccchhhhH
Confidence 457899999999998888543 234443 79999999987761 100 0 00000 000 1
Q ss_pred hhHHHHHHHHHHHHhCCCceEEEEeChhHHHHHHHHHhCCccccceeeecCC
Q 045774 77 LDGYVDDLLSFLDALEIDRCAFVGHSVSAMIGLLAAIHRPNLFSRLILIGGS 128 (275)
Q Consensus 77 ~~~~a~dl~~~l~~l~~~~~~lvGhS~GG~val~~a~~~p~~v~~lvli~~~ 128 (275)
.+++.+.+...++.++.++++++||||||..|+.++.++|+++++++.+++.
T Consensus 126 ~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~ 177 (283)
T PLN02442 126 VKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPI 177 (283)
T ss_pred HHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCc
Confidence 2333334444444567788999999999999999999999999999988764
No 74
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.68 E-value=9.6e-15 Score=122.49 Aligned_cols=105 Identities=17% Similarity=0.250 Sum_probs=75.6
Q ss_pred CceEEEEcCCCCChhhhhhh--HHHhhc--CCEEEEEcc--CCCCCCCCC----------------C-CCcccccchhHH
Q 045774 24 QSIIVFSHGFGSDQSVWSRV--IPSFTR--AYRVISFDL--MCSGSCDPT----------------N-YDFQRYATLDGY 80 (275)
Q Consensus 24 ~~~ivllHG~~~~~~~w~~~--~~~l~~--~~~via~Dl--~G~G~S~~~----------------~-~~~~~~~~~~~~ 80 (275)
.|+|+|+||++++...|... +..+++ ++.|+++|. +|+|.+... . .....+......
T Consensus 42 ~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~~ 121 (275)
T TIGR02821 42 VPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFYVDATEEPWSQHYRMYSYI 121 (275)
T ss_pred CCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCccccccCCcCcccccchHHHHH
Confidence 36899999999999888543 344543 699999998 455432100 0 000112113344
Q ss_pred HHHHHHHHHH---hCCCceEEEEeChhHHHHHHHHHhCCccccceeeecCC
Q 045774 81 VDDLLSFLDA---LEIDRCAFVGHSVSAMIGLLAAIHRPNLFSRLILIGGS 128 (275)
Q Consensus 81 a~dl~~~l~~---l~~~~~~lvGhS~GG~val~~a~~~p~~v~~lvli~~~ 128 (275)
++++..++++ ++.+++.++||||||++++.++.++|+++++++++++.
T Consensus 122 ~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~ 172 (275)
T TIGR02821 122 VQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPI 172 (275)
T ss_pred HHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCc
Confidence 7888888887 35568999999999999999999999999999988764
No 75
>PLN00021 chlorophyllase
Probab=99.68 E-value=3e-15 Score=126.95 Aligned_cols=100 Identities=22% Similarity=0.307 Sum_probs=72.1
Q ss_pred ceEEEEcCCCCChhhhhhhHHHhhc-CCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHH-------hCCCce
Q 045774 25 SIIVFSHGFGSDQSVWSRVIPSFTR-AYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDA-------LEIDRC 96 (275)
Q Consensus 25 ~~ivllHG~~~~~~~w~~~~~~l~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~-------l~~~~~ 96 (275)
|+|||+||++.+...|..+++.|++ +|.|+++|++|++.+... ....+.....+.+.+.++. .+.+++
T Consensus 53 PvVv~lHG~~~~~~~y~~l~~~Las~G~~VvapD~~g~~~~~~~----~~i~d~~~~~~~l~~~l~~~l~~~~~~d~~~v 128 (313)
T PLN00021 53 PVLLFLHGYLLYNSFYSQLLQHIASHGFIVVAPQLYTLAGPDGT----DEIKDAAAVINWLSSGLAAVLPEGVRPDLSKL 128 (313)
T ss_pred CEEEEECCCCCCcccHHHHHHHHHhCCCEEEEecCCCcCCCCch----hhHHHHHHHHHHHHhhhhhhcccccccChhhe
Confidence 6899999999999999999999986 699999999997643210 1111122222233332222 234689
Q ss_pred EEEEeChhHHHHHHHHHhCCc-----cccceeeecCC
Q 045774 97 AFVGHSVSAMIGLLAAIHRPN-----LFSRLILIGGS 128 (275)
Q Consensus 97 ~lvGhS~GG~val~~a~~~p~-----~v~~lvli~~~ 128 (275)
.++||||||.+++.+|..+|+ ++++++++++.
T Consensus 129 ~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv 165 (313)
T PLN00021 129 ALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPV 165 (313)
T ss_pred EEEEECcchHHHHHHHhhccccccccceeeEEeeccc
Confidence 999999999999999999885 57888887653
No 76
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.67 E-value=5.1e-16 Score=129.78 Aligned_cols=111 Identities=19% Similarity=0.252 Sum_probs=82.4
Q ss_pred hceEEecCCCceEEEEcCCCCCh-hhhhhhH-HH-hh-cCCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHH
Q 045774 15 LNVRVVGQGQSIIVFSHGFGSDQ-SVWSRVI-PS-FT-RAYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDA 90 (275)
Q Consensus 15 ~~~~~~g~g~~~ivllHG~~~~~-~~w~~~~-~~-l~-~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~ 90 (275)
+.+...+...|++|+||||+++. ..|...+ .. +. .+++|+++|+++++.+.. .....+++..++++.++++.
T Consensus 27 ~~~~~f~~~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y----~~a~~~~~~v~~~la~~l~~ 102 (275)
T cd00707 27 LKNSNFNPSRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNY----PQAVNNTRVVGAELAKFLDF 102 (275)
T ss_pred hhhcCCCCCCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccCh----HHHHHhHHHHHHHHHHHHHH
Confidence 44444555567899999999887 6776544 33 44 369999999999843321 11112466666777777765
Q ss_pred h------CCCceEEEEeChhHHHHHHHHHhCCccccceeeecCCC
Q 045774 91 L------EIDRCAFVGHSVSAMIGLLAAIHRPNLFSRLILIGGSP 129 (275)
Q Consensus 91 l------~~~~~~lvGhS~GG~val~~a~~~p~~v~~lvli~~~~ 129 (275)
+ +.++++||||||||.+|..++.++|++|+++++++++.
T Consensus 103 L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~ 147 (275)
T cd00707 103 LVDNTGLSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAG 147 (275)
T ss_pred HHHhcCCChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCc
Confidence 4 34689999999999999999999999999999999764
No 77
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.64 E-value=3.1e-14 Score=116.11 Aligned_cols=218 Identities=14% Similarity=0.168 Sum_probs=131.3
Q ss_pred eEEEEcCCCCChhhhhhhHHHhhcC-CEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhCCC-ceEEEEeCh
Q 045774 26 IIVFSHGFGSDQSVWSRVIPSFTRA-YRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALEID-RCAFVGHSV 103 (275)
Q Consensus 26 ~ivllHG~~~~~~~w~~~~~~l~~~-~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~~-~~~lvGhS~ 103 (275)
+|+++|+.+++...|..+.+.|.+. +.|++++.+|.+... ....+++++|+...+.+.....+ ++.|+|||+
T Consensus 2 ~lf~~p~~gG~~~~y~~la~~l~~~~~~v~~i~~~~~~~~~------~~~~si~~la~~y~~~I~~~~~~gp~~L~G~S~ 75 (229)
T PF00975_consen 2 PLFCFPPAGGSASSYRPLARALPDDVIGVYGIEYPGRGDDE------PPPDSIEELASRYAEAIRARQPEGPYVLAGWSF 75 (229)
T ss_dssp EEEEESSTTCSGGGGHHHHHHHTTTEEEEEEECSTTSCTTS------HEESSHHHHHHHHHHHHHHHTSSSSEEEEEETH
T ss_pred eEEEEcCCccCHHHHHHHHHhCCCCeEEEEEEecCCCCCCC------CCCCCHHHHHHHHHHHhhhhCCCCCeeehccCc
Confidence 6999999999999999999999997 999999999998332 22358999999999999887665 999999999
Q ss_pred hHHHHHHHHHh---CCccccceeeecCCCCCcCCCCCcCCCCcchHHHHHHHHhhhhhhhhhhhcccccCCCCChHHHHH
Q 045774 104 SAMIGLLAAIH---RPNLFSRLILIGGSPRFTNDGNYIGGIDPAHMEEVFRRMESNYESWVAGFVPMALGADVPDMALQE 180 (275)
Q Consensus 104 GG~val~~a~~---~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (275)
||.+|.++|.+ .-..|..++++|+.+......... ...........+...... +. .....+.
T Consensus 76 Gg~lA~E~A~~Le~~G~~v~~l~liD~~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~------~~------~~~~~~~ 140 (229)
T PF00975_consen 76 GGILAFEMARQLEEAGEEVSRLILIDSPPPSIKERPRS---REPSDEQFIEELRRIGGT------PD------ASLEDEE 140 (229)
T ss_dssp HHHHHHHHHHHHHHTT-SESEEEEESCSSTTCHSCHHH---HHCHHHHHHHHHHHHCHH------HH------HHCHHHH
T ss_pred cHHHHHHHHHHHHHhhhccCceEEecCCCCCcccchhh---hhhhHHHHHHHHHHhcCC------ch------hhhcCHH
Confidence 99999998865 344699999999754321100000 000000011111100000 00 0000011
Q ss_pred HHHHhhcCChHHHHHHHHHHhhhchH-hhhCCCCCcEEEEEeCCCCCCCHH---HHHHHHHHcCCCccEEEcCCCCCCCC
Q 045774 181 FSRTLFSMRPDIALHVARTAFAADLR-HVLGLVRVPVCIIQSSVDLSVPPA---VAEYMRRHLGGPTVLEFLPTHGHLPH 256 (275)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~d~~-~~l~~i~~P~l~i~G~~D~~~~~~---~~~~~~~~~~~~~~~~~i~~~gH~~~ 256 (275)
....+.. .. ...... ..+.. .....-.+|.++.....|...... ......+..++..+++.++ ++|+.+
T Consensus 141 ~~~~~~~---~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~v~-G~H~~~ 213 (229)
T PF00975_consen 141 LLARLLR---AL-RDDFQA--LENYSIRPIDKQKVPITLFYALDDPLVSMDRLEEADRWWDYTSGDVEVHDVP-GDHFSM 213 (229)
T ss_dssp HHHHHHH---HH-HHHHHH--HHTCS-TTSSSESSEEEEEEECSSSSSSHHCGGHHCHHHGCBSSSEEEEEES-SETTGH
T ss_pred HHHHHHH---HH-HHHHHH--HhhccCCccccCCCcEEEEecCCCccccchhhhhHHHHHHhcCCCcEEEEEc-CCCcEe
Confidence 1111100 00 000000 00110 001111567888989888877665 2333555566544577776 699999
Q ss_pred CC-ChHHHHHHHHHHH
Q 045774 257 VS-SPAPVANAIQQLL 271 (275)
Q Consensus 257 ~e-~p~~~~~~i~~fl 271 (275)
+. +.+++++.|.++|
T Consensus 214 l~~~~~~i~~~I~~~~ 229 (229)
T PF00975_consen 214 LKPHVAEIAEKIAEWL 229 (229)
T ss_dssp HSTTHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHhccC
Confidence 97 7788888888765
No 78
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.62 E-value=2.4e-14 Score=132.58 Aligned_cols=91 Identities=19% Similarity=0.296 Sum_probs=74.5
Q ss_pred ceEEEEcCCCCChhhhhhhHHHhhc-CCEEEEEccCCCCCCCCC---------CCCcccc----------cchhHHHHHH
Q 045774 25 SIIVFSHGFGSDQSVWSRVIPSFTR-AYRVISFDLMCSGSCDPT---------NYDFQRY----------ATLDGYVDDL 84 (275)
Q Consensus 25 ~~ivllHG~~~~~~~w~~~~~~l~~-~~~via~Dl~G~G~S~~~---------~~~~~~~----------~~~~~~a~dl 84 (275)
|+|||+||++++...|..+++.|.+ +|+|+++|+||||.|... ......| ++++..+.|+
T Consensus 450 P~VVllHG~~g~~~~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dl 529 (792)
T TIGR03502 450 PVVIYQHGITGAKENALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQSILDL 529 (792)
T ss_pred cEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHHHHHH
Confidence 4799999999999999999999974 799999999999999432 0011111 3689999999
Q ss_pred HHHHHHhC----------------CCceEEEEeChhHHHHHHHHHhC
Q 045774 85 LSFLDALE----------------IDRCAFVGHSVSAMIGLLAAIHR 115 (275)
Q Consensus 85 ~~~l~~l~----------------~~~~~lvGhS~GG~val~~a~~~ 115 (275)
..+...++ ..+++++||||||++++.++...
T Consensus 530 l~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~a 576 (792)
T TIGR03502 530 LGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAYA 576 (792)
T ss_pred HHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHhc
Confidence 99988887 24799999999999999988653
No 79
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.62 E-value=7.9e-14 Score=124.26 Aligned_cols=227 Identities=14% Similarity=0.127 Sum_probs=130.5
Q ss_pred CceEEEEcCCCCChhhhh-----hhHHHhhc-CCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHh----CC
Q 045774 24 QSIIVFSHGFGSDQSVWS-----RVIPSFTR-AYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDAL----EI 93 (275)
Q Consensus 24 ~~~ivllHG~~~~~~~w~-----~~~~~l~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l----~~ 93 (275)
+.|||+|+.+..-...|+ .+++.|.+ +|+|+.+|+++-+.+.. ..++++|++.+.+.++.. |.
T Consensus 215 ~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~r-------~~~ldDYv~~i~~Ald~V~~~tG~ 287 (560)
T TIGR01839 215 ARPLLVVPPQINKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAHR-------EWGLSTYVDALKEAVDAVRAITGS 287 (560)
T ss_pred CCcEEEechhhhhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhhc-------CCCHHHHHHHHHHHHHHHHHhcCC
Confidence 358999999987777774 57776654 79999999999776532 236888888777777755 67
Q ss_pred CceEEEEeChhHHHHHH----HHHhCCc-cccceeeecCCCCCcCCCCCcCCCCcc-hH------------------HHH
Q 045774 94 DRCAFVGHSVSAMIGLL----AAIHRPN-LFSRLILIGGSPRFTNDGNYIGGIDPA-HM------------------EEV 149 (275)
Q Consensus 94 ~~~~lvGhS~GG~val~----~a~~~p~-~v~~lvli~~~~~~~~~~~~~~~~~~~-~~------------------~~~ 149 (275)
++++++||||||.+++. +++++++ +|++++++.+...+.... ....+..+ .+ ...
T Consensus 288 ~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~~~g-~l~~f~~e~~~~~~e~~~~~~G~lpg~~ma~~ 366 (560)
T TIGR01839 288 RDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDSTMES-PAALFADEQTLEAAKRRSYQAGVLDGSEMAKV 366 (560)
T ss_pred CCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccCCCC-cchhccChHHHHHHHHHHHhcCCcCHHHHHHH
Confidence 88999999999999886 7888886 899999987654432111 01111111 01 111
Q ss_pred HHHHhhhhhhhhhhhcccccCCCCChHHHHHHHHHhhcCChHHHHHHHHHHhhhc-h-----------HhhhCCCCCcEE
Q 045774 150 FRRMESNYESWVAGFVPMALGADVPDMALQEFSRTLFSMRPDIALHVARTAFAAD-L-----------RHVLGLVRVPVC 217 (275)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-~-----------~~~l~~i~~P~l 217 (275)
|..++....-|.--......+.......+..+......+.......+.. ++..+ + .-.+.+|++|++
T Consensus 367 F~~LrP~dliw~y~v~~yllg~~p~~fdll~Wn~D~t~lPg~~~~e~l~-ly~~N~L~~pG~l~v~G~~idL~~I~~Pvl 445 (560)
T TIGR01839 367 FAWMRPNDLIWNYWVNNYLLGNEPPAFDILYWNNDTTRLPAAFHGDLLD-MFKSNPLTRPDALEVCGTPIDLKKVKCDSF 445 (560)
T ss_pred HHhcCchhhhHHHHHHHhhcCCCcchhhHHHHhCcCccchHHHHHHHHH-HHhcCCCCCCCCEEECCEEechhcCCCCeE
Confidence 1111111000000000000011100000110100000011111111221 21111 1 123678999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHcCCCccEEEcCCCCCCCCCCCh
Q 045774 218 IIQSSVDLSVPPAVAEYMRRHLGGPTVLEFLPTHGHLPHVSSP 260 (275)
Q Consensus 218 ~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p 260 (275)
++.|++|.++|++....+.+.+++..+.+. .++||.-=+-+|
T Consensus 446 ~va~~~DHIvPw~s~~~~~~l~gs~~~fvl-~~gGHIggivnp 487 (560)
T TIGR01839 446 SVAGTNDHITPWDAVYRSALLLGGKRRFVL-SNSGHIQSILNP 487 (560)
T ss_pred EEecCcCCcCCHHHHHHHHHHcCCCeEEEe-cCCCccccccCC
Confidence 999999999999999999998886545544 468998544444
No 80
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.61 E-value=7e-15 Score=118.70 Aligned_cols=194 Identities=20% Similarity=0.216 Sum_probs=109.3
Q ss_pred hhhhHHHhh-cCCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHh------CCCceEEEEeChhHHHHHHHH
Q 045774 40 WSRVIPSFT-RAYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDAL------EIDRCAFVGHSVSAMIGLLAA 112 (275)
Q Consensus 40 w~~~~~~l~-~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l------~~~~~~lvGhS~GG~val~~a 112 (275)
|......|+ .+|.|+.+|.||.+..............-....+|+.+.++.+ +.+++.++|||+||.+++.++
T Consensus 3 f~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~ 82 (213)
T PF00326_consen 3 FNWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAA 82 (213)
T ss_dssp -SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHH
T ss_pred eeHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhh
Confidence 445566774 5899999999998854210000000011123455555555544 235799999999999999999
Q ss_pred HhCCccccceeeecCCCCCcCCCCCcCCCCcchHHHHHHHHhhhhhhhhhhhcccccCCCCChHHHHHHHHHhhcCChHH
Q 045774 113 IHRPNLFSRLILIGGSPRFTNDGNYIGGIDPAHMEEVFRRMESNYESWVAGFVPMALGADVPDMALQEFSRTLFSMRPDI 192 (275)
Q Consensus 113 ~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (275)
.++|++++++|..++....... ... . ..+.. .+...+. ..... .+.+.. ..
T Consensus 83 ~~~~~~f~a~v~~~g~~d~~~~---~~~-~-~~~~~----------~~~~~~~----~~~~~---~~~~~~-~s------ 133 (213)
T PF00326_consen 83 TQHPDRFKAAVAGAGVSDLFSY---YGT-T-DIYTK----------AEYLEYG----DPWDN---PEFYRE-LS------ 133 (213)
T ss_dssp HHTCCGSSEEEEESE-SSTTCS---BHH-T-CCHHH----------GHHHHHS----STTTS---HHHHHH-HH------
T ss_pred cccceeeeeeeccceecchhcc---ccc-c-ccccc----------ccccccC----ccchh---hhhhhh-hc------
Confidence 9999999999988764332110 000 0 00000 0000000 00000 011110 00
Q ss_pred HHHHHHHHhhhchHhhhCC--CCCcEEEEEeCCCCCCCHHHHHHHHHHcC---CCccEEEcCCCCCCCC-CCChHHHHHH
Q 045774 193 ALHVARTAFAADLRHVLGL--VRVPVCIIQSSVDLSVPPAVAEYMRRHLG---GPTVLEFLPTHGHLPH-VSSPAPVANA 266 (275)
Q Consensus 193 ~~~~~~~~~~~d~~~~l~~--i~~P~l~i~G~~D~~~~~~~~~~~~~~~~---~~~~~~~i~~~gH~~~-~e~p~~~~~~ 266 (275)
....+.+ +++|+|+++|++|..+|...+..+.+.+. ...++.++|++||... -+...+..+.
T Consensus 134 ------------~~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~~~~~~~~~ 201 (213)
T PF00326_consen 134 ------------PISPADNVQIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNPENRRDWYER 201 (213)
T ss_dssp ------------HGGGGGGCGGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSHHHHHHHHHH
T ss_pred ------------cccccccccCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCchhHHHHHHH
Confidence 0011122 78999999999999999988777765442 2257888999999544 3444567788
Q ss_pred HHHHHHhh
Q 045774 267 IQQLLRRR 274 (275)
Q Consensus 267 i~~fl~~~ 274 (275)
+.+|+++.
T Consensus 202 ~~~f~~~~ 209 (213)
T PF00326_consen 202 ILDFFDKY 209 (213)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88888764
No 81
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.57 E-value=3.8e-14 Score=109.73 Aligned_cols=200 Identities=14% Similarity=0.168 Sum_probs=131.7
Q ss_pred CCCceEEEEcCCCCChhhhhhhHHHhhc--CCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHh---CCCce
Q 045774 22 QGQSIIVFSHGFGSDQSVWSRVIPSFTR--AYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDAL---EIDRC 96 (275)
Q Consensus 22 ~g~~~ivllHG~~~~~~~w~~~~~~l~~--~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l---~~~~~ 96 (275)
+..|+++..||+.++..+.-+.+..+-. +-+|.-++.||+|.|+.+.. +. .+...++.+.+.+-.. +..+.
T Consensus 76 ~S~pTlLyfh~NAGNmGhr~~i~~~fy~~l~mnv~ivsYRGYG~S~Gsps--E~--GL~lDs~avldyl~t~~~~dktki 151 (300)
T KOG4391|consen 76 SSRPTLLYFHANAGNMGHRLPIARVFYVNLKMNVLIVSYRGYGKSEGSPS--EE--GLKLDSEAVLDYLMTRPDLDKTKI 151 (300)
T ss_pred CCCceEEEEccCCCcccchhhHHHHHHHHcCceEEEEEeeccccCCCCcc--cc--ceeccHHHHHHHHhcCccCCcceE
Confidence 3557999999999999888888776644 57899999999999964321 11 2444444444443322 23469
Q ss_pred EEEEeChhHHHHHHHHHhCCccccceeeecCCCCCcCCCCCcCCCCcchHHHHHHHHhhhhhhhhhhhcccccCCCCChH
Q 045774 97 AFVGHSVSAMIGLLAAIHRPNLFSRLILIGGSPRFTNDGNYIGGIDPAHMEEVFRRMESNYESWVAGFVPMALGADVPDM 176 (275)
Q Consensus 97 ~lvGhS~GG~val~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (275)
+|.|.|+||++|+.+|++..+|+.++++-++..... . ++ .+..+...
T Consensus 152 vlfGrSlGGAvai~lask~~~ri~~~ivENTF~SIp-----------~-------~~-----------i~~v~p~~---- 198 (300)
T KOG4391|consen 152 VLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSIP-----------H-------MA-----------IPLVFPFP---- 198 (300)
T ss_pred EEEecccCCeeEEEeeccchhheeeeeeechhccch-----------h-------hh-----------hheeccch----
Confidence 999999999999999999999999999876421100 0 00 00000000
Q ss_pred HHHHHHHHhhcCChHHHHHHHHHHhhhchHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHHcCCC-ccEEEcCCCCCCC
Q 045774 177 ALQEFSRTLFSMRPDIALHVARTAFAADLRHVLGLVRVPVCIIQSSVDLSVPPAVAEYMRRHLGGP-TVLEFLPTHGHLP 255 (275)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~-~~~~~i~~~gH~~ 255 (275)
.+.+...... . .+.....+.+-+.|.|+|.|.+|.++|+-+.+.+.+..++. +++..+|++.|.=
T Consensus 199 -~k~i~~lc~k-----------n--~~~S~~ki~~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~~Krl~eFP~gtHND 264 (300)
T KOG4391|consen 199 -MKYIPLLCYK-----------N--KWLSYRKIGQCRMPFLFISGLKDELVPPVMMRQLYELCPSRTKRLAEFPDGTHND 264 (300)
T ss_pred -hhHHHHHHHH-----------h--hhcchhhhccccCceEEeecCccccCCcHHHHHHHHhCchhhhhheeCCCCccCc
Confidence 0000000000 0 00112234567899999999999999999999899888764 4788899999976
Q ss_pred CCCChHHHHHHHHHHHHh
Q 045774 256 HVSSPAPVANAIQQLLRR 273 (275)
Q Consensus 256 ~~e~p~~~~~~i~~fl~~ 273 (275)
.+-.- ---++|++||.+
T Consensus 265 T~i~d-GYfq~i~dFlaE 281 (300)
T KOG4391|consen 265 TWICD-GYFQAIEDFLAE 281 (300)
T ss_pred eEEec-cHHHHHHHHHHH
Confidence 55543 344888888865
No 82
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.56 E-value=2.5e-13 Score=109.56 Aligned_cols=107 Identities=17% Similarity=0.235 Sum_probs=70.2
Q ss_pred CCceEEEEcCCCCChhhhh---hhHHHhh-cCCEEEEEccCCCCCCCCC--CCCcccccchhHHHHHHHHHHH----HhC
Q 045774 23 GQSIIVFSHGFGSDQSVWS---RVIPSFT-RAYRVISFDLMCSGSCDPT--NYDFQRYATLDGYVDDLLSFLD----ALE 92 (275)
Q Consensus 23 g~~~ivllHG~~~~~~~w~---~~~~~l~-~~~~via~Dl~G~G~S~~~--~~~~~~~~~~~~~a~dl~~~l~----~l~ 92 (275)
..|.||++||.+.+...|. .+...+. .+|.|+++|.+|+|.+... .........-.....++.++++ ..+
T Consensus 12 ~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 91 (212)
T TIGR01840 12 PRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKANYS 91 (212)
T ss_pred CCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHhcC
Confidence 3478999999998887775 2333333 3699999999999854310 0000000000112223333333 333
Q ss_pred C--CceEEEEeChhHHHHHHHHHhCCccccceeeecCCC
Q 045774 93 I--DRCAFVGHSVSAMIGLLAAIHRPNLFSRLILIGGSP 129 (275)
Q Consensus 93 ~--~~~~lvGhS~GG~val~~a~~~p~~v~~lvli~~~~ 129 (275)
+ +++.|+|||+||++++.++.++|+++++++.+++.+
T Consensus 92 id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~ 130 (212)
T TIGR01840 92 IDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLP 130 (212)
T ss_pred cChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCc
Confidence 3 479999999999999999999999999999887644
No 83
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.55 E-value=4.1e-13 Score=110.96 Aligned_cols=237 Identities=18% Similarity=0.233 Sum_probs=123.3
Q ss_pred ceEEEEcCCCCCh-hhh-hhhHHHhhc-CCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHh----CCCceE
Q 045774 25 SIIVFSHGFGSDQ-SVW-SRVIPSFTR-AYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDAL----EIDRCA 97 (275)
Q Consensus 25 ~~ivllHG~~~~~-~~w-~~~~~~l~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l----~~~~~~ 97 (275)
|.||++||+.+++ ..+ +.++..+.+ +|.|++++.||||.+.-. .+.-|. ..+.+|+..+++.+ ...+..
T Consensus 76 P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~--~p~~yh--~G~t~D~~~~l~~l~~~~~~r~~~ 151 (345)
T COG0429 76 PLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANT--SPRLYH--SGETEDIRFFLDWLKARFPPRPLY 151 (345)
T ss_pred ceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCccc--Ccceec--ccchhHHHHHHHHHHHhCCCCceE
Confidence 6899999985554 333 345566654 799999999999988421 111222 23446666666655 356899
Q ss_pred EEEeChhH-HHHHHHHHhCCc-cccceeeecCCCCCcCCCC-CcCCCCcchHHHHHHHH-hhhhhhhhhhhcccccCCCC
Q 045774 98 FVGHSVSA-MIGLLAAIHRPN-LFSRLILIGGSPRFTNDGN-YIGGIDPAHMEEVFRRM-ESNYESWVAGFVPMALGADV 173 (275)
Q Consensus 98 lvGhS~GG-~val~~a~~~p~-~v~~lvli~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 173 (275)
.||.|+|| +++..++..--+ .+.+.+.++.......... .-++++. .++... ....+.....-.... ....
T Consensus 152 avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~~~~~~l~~~~s~----~ly~r~l~~~L~~~~~~kl~~l-~~~~ 226 (345)
T COG0429 152 AVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLEACAYRLDSGFSL----RLYSRYLLRNLKRNAARKLKEL-EPSL 226 (345)
T ss_pred EEEecccHHHHHHHHHhhccCcccceeeeeeCHHHHHHHHHHhcCchhh----hhhHHHHHHHHHHHHHHHHHhc-Cccc
Confidence 99999999 777776654332 3444444443211100000 0011110 111110 000010000000000 0111
Q ss_pred C---hHHHHHHHHHhhcCChHHH------HHHHHHHhhhchHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHH-HcCCCc
Q 045774 174 P---DMALQEFSRTLFSMRPDIA------LHVARTAFAADLRHVLGLVRVPVCIIQSSVDLSVPPAVAEYMRR-HLGGPT 243 (275)
Q Consensus 174 ~---~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~d~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~-~~~~~~ 243 (275)
+ .+.++... .+...+.... ......-.+......+++|.+|+|+|+..+|++++++...+... ..|+ .
T Consensus 227 p~~~~~~ik~~~-ti~eFD~~~Tap~~Gf~da~dYYr~aSs~~~L~~Ir~PtLii~A~DDP~~~~~~iP~~~~~~np~-v 304 (345)
T COG0429 227 PGTVLAAIKRCR-TIREFDDLLTAPLHGFADAEDYYRQASSLPLLPKIRKPTLIINAKDDPFMPPEVIPKLQEMLNPN-V 304 (345)
T ss_pred CcHHHHHHHhhc-hHHhccceeeecccCCCcHHHHHHhccccccccccccceEEEecCCCCCCChhhCCcchhcCCCc-e
Confidence 1 11111111 1111110000 00000111222345688999999999999999999988776666 3444 4
Q ss_pred cEEEcCCCCCCCCCC----ChH-HHHHHHHHHHH
Q 045774 244 VLEFLPTHGHLPHVS----SPA-PVANAIQQLLR 272 (275)
Q Consensus 244 ~~~~i~~~gH~~~~e----~p~-~~~~~i~~fl~ 272 (275)
.+...+.+||.-++. +|. ...+.|.+|++
T Consensus 305 ~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~ 338 (345)
T COG0429 305 LLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLD 338 (345)
T ss_pred EEEeecCCceEEeccCccccchhhHHHHHHHHHH
Confidence 677778899999888 443 55566677765
No 84
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.55 E-value=5.9e-13 Score=107.71 Aligned_cols=180 Identities=19% Similarity=0.266 Sum_probs=107.9
Q ss_pred CCCceEEEEcCCCCChhhhhhhHHH-h-hcCCEEEEEccC------CCCC---CCCC--CCCc---ccccchhHHHHHHH
Q 045774 22 QGQSIIVFSHGFGSDQSVWSRVIPS-F-TRAYRVISFDLM------CSGS---CDPT--NYDF---QRYATLDGYVDDLL 85 (275)
Q Consensus 22 ~g~~~ivllHG~~~~~~~w~~~~~~-l-~~~~~via~Dl~------G~G~---S~~~--~~~~---~~~~~~~~~a~dl~ 85 (275)
...+.|||+||+|.+...|..+... + ..+.+++.+.=| ..|. +-.. ..+. .+...+..-++.+.
T Consensus 12 ~~~~lvi~LHG~G~~~~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~~l~ 91 (216)
T PF02230_consen 12 KAKPLVILLHGYGDSEDLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAERLD 91 (216)
T ss_dssp T-SEEEEEE--TTS-HHHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHHHHH
T ss_pred CCceEEEEECCCCCCcchhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHHHHH
Confidence 3456899999999999888777652 2 235677766443 1233 2110 0011 11224555666666
Q ss_pred HHHHHh---C--CCceEEEEeChhHHHHHHHHHhCCccccceeeecCCCCCcCCCCCcCCCCcchHHHHHHHHhhhhhhh
Q 045774 86 SFLDAL---E--IDRCAFVGHSVSAMIGLLAAIHRPNLFSRLILIGGSPRFTNDGNYIGGIDPAHMEEVFRRMESNYESW 160 (275)
Q Consensus 86 ~~l~~l---~--~~~~~lvGhS~GG~val~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (275)
++++.+ + .++++|.|.|.||++|+.++.++|+.+.++|.+++...... .+
T Consensus 92 ~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~-------------------------~~ 146 (216)
T PF02230_consen 92 ELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPES-------------------------EL 146 (216)
T ss_dssp HHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGC-------------------------CC
T ss_pred HHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccccccc-------------------------cc
Confidence 776643 3 35799999999999999999999999999999876321000 00
Q ss_pred hhhhcccccCCCCChHHHHHHHHHhhcCChHHHHHHHHHHhhhchHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHHcC
Q 045774 161 VAGFVPMALGADVPDMALQEFSRTLFSMRPDIALHVARTAFAADLRHVLGLVRVPVCIIQSSVDLSVPPAVAEYMRRHLG 240 (275)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~ 240 (275)
. +.. -..-++|+++++|++|.++|.+..+...+.+.
T Consensus 147 ~------------------------------------------~~~--~~~~~~pi~~~hG~~D~vvp~~~~~~~~~~L~ 182 (216)
T PF02230_consen 147 E------------------------------------------DRP--EALAKTPILIIHGDEDPVVPFEWAEKTAEFLK 182 (216)
T ss_dssp H------------------------------------------CCH--CCCCTS-EEEEEETT-SSSTHHHHHHHHHHHH
T ss_pred c------------------------------------------ccc--cccCCCcEEEEecCCCCcccHHHHHHHHHHHH
Confidence 0 000 00116999999999999999988877776654
Q ss_pred CC---ccEEEcCCCCCCCCCCChHHHHHHHHHHHHhh
Q 045774 241 GP---TVLEFLPTHGHLPHVSSPAPVANAIQQLLRRR 274 (275)
Q Consensus 241 ~~---~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 274 (275)
.. .+++.+++.||-+. .+..+.+.+||+++
T Consensus 183 ~~~~~v~~~~~~g~gH~i~----~~~~~~~~~~l~~~ 215 (216)
T PF02230_consen 183 AAGANVEFHEYPGGGHEIS----PEELRDLREFLEKH 215 (216)
T ss_dssp CTT-GEEEEEETT-SSS------HHHHHHHHHHHHHH
T ss_pred hcCCCEEEEEcCCCCCCCC----HHHHHHHHHHHhhh
Confidence 32 36778899999774 44457788888765
No 85
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.53 E-value=2.1e-13 Score=124.96 Aligned_cols=102 Identities=19% Similarity=0.215 Sum_probs=76.5
Q ss_pred CceEEEEcCCCCChh---hhhh-hHHHh-hcCCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhC-----C
Q 045774 24 QSIIVFSHGFGSDQS---VWSR-VIPSF-TRAYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALE-----I 93 (275)
Q Consensus 24 ~~~ivllHG~~~~~~---~w~~-~~~~l-~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~-----~ 93 (275)
.|+||++||++.+.. .|.. ....| +.+|.|+++|+||+|.|+... ..+ + ...++|+.++++.+. .
T Consensus 22 ~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~---~~~-~-~~~~~D~~~~i~~l~~q~~~~ 96 (550)
T TIGR00976 22 VPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEF---DLL-G-SDEAADGYDLVDWIAKQPWCD 96 (550)
T ss_pred CCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCce---Eec-C-cccchHHHHHHHHHHhCCCCC
Confidence 368999999987653 2322 33444 458999999999999996421 111 1 557777777777653 2
Q ss_pred CceEEEEeChhHHHHHHHHHhCCccccceeeecCCCC
Q 045774 94 DRCAFVGHSVSAMIGLLAAIHRPNLFSRLILIGGSPR 130 (275)
Q Consensus 94 ~~~~lvGhS~GG~val~~a~~~p~~v~~lvli~~~~~ 130 (275)
.++.++||||||++++.+|..+|+++++++..++...
T Consensus 97 ~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d 133 (550)
T TIGR00976 97 GNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWD 133 (550)
T ss_pred CcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccc
Confidence 5899999999999999999999999999998876543
No 86
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.51 E-value=7.4e-13 Score=133.00 Aligned_cols=102 Identities=15% Similarity=0.102 Sum_probs=88.0
Q ss_pred cCCCceEEEEcCCCCChhhhhhhHHHhhcCCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhCC-CceEEE
Q 045774 21 GQGQSIIVFSHGFGSDQSVWSRVIPSFTRAYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALEI-DRCAFV 99 (275)
Q Consensus 21 g~g~~~ivllHG~~~~~~~w~~~~~~l~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~-~~~~lv 99 (275)
|++ ++++++||+++++..|..+.+.|..+++|+++|++|+|.+.+ . .++++++++++.+.++.+.. .+++++
T Consensus 1066 ~~~-~~l~~lh~~~g~~~~~~~l~~~l~~~~~v~~~~~~g~~~~~~-----~-~~~l~~la~~~~~~i~~~~~~~p~~l~ 1138 (1296)
T PRK10252 1066 GDG-PTLFCFHPASGFAWQFSVLSRYLDPQWSIYGIQSPRPDGPMQ-----T-ATSLDEVCEAHLATLLEQQPHGPYHLL 1138 (1296)
T ss_pred CCC-CCeEEecCCCCchHHHHHHHHhcCCCCcEEEEECCCCCCCCC-----C-CCCHHHHHHHHHHHHHhhCCCCCEEEE
Confidence 444 579999999999999999999999899999999999986532 1 24799999999999998764 489999
Q ss_pred EeChhHHHHHHHHHh---CCccccceeeecCCC
Q 045774 100 GHSVSAMIGLLAAIH---RPNLFSRLILIGGSP 129 (275)
Q Consensus 100 GhS~GG~val~~a~~---~p~~v~~lvli~~~~ 129 (275)
||||||++|.++|.+ .|+++..++++++.+
T Consensus 1139 G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~~~ 1171 (1296)
T PRK10252 1139 GYSLGGTLAQGIAARLRARGEEVAFLGLLDTWP 1171 (1296)
T ss_pred EechhhHHHHHHHHHHHHcCCceeEEEEecCCC
Confidence 999999999999985 688999999998643
No 87
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.49 E-value=9.1e-13 Score=102.04 Aligned_cols=159 Identities=24% Similarity=0.352 Sum_probs=102.9
Q ss_pred EEEEcCCCCC-hhhhhhhHH-HhhcCCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhCCCceEEEEeChh
Q 045774 27 IVFSHGFGSD-QSVWSRVIP-SFTRAYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALEIDRCAFVGHSVS 104 (275)
Q Consensus 27 ivllHG~~~~-~~~w~~~~~-~l~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~G 104 (275)
|++|||++.+ .++|....+ .|...++|-..|+ .. .+++.|.+.+.+.+... .++++|||||+|
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~~~V~~~~~-----~~---------P~~~~W~~~l~~~i~~~-~~~~ilVaHSLG 65 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENSVRVEQPDW-----DN---------PDLDEWVQALDQAIDAI-DEPTILVAHSLG 65 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTSEEEEEC-------TS-----------HHHHHHHHHHCCHC--TTTEEEEEETHH
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCCeEEecccc-----CC---------CCHHHHHHHHHHHHhhc-CCCeEEEEeCHH
Confidence 6899999776 588887554 5665677776665 11 14788999998888865 356999999999
Q ss_pred HHHHHHHH-HhCCccccceeeecCCCCCcCCCCCcCCCCcchHHHHHHHHhhhhhhhhhhhcccccCCCCChHHHHHHHH
Q 045774 105 AMIGLLAA-IHRPNLFSRLILIGGSPRFTNDGNYIGGIDPAHMEEVFRRMESNYESWVAGFVPMALGADVPDMALQEFSR 183 (275)
Q Consensus 105 G~val~~a-~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (275)
+..++.++ ...+.+|++++|+++.-.. . ..........+.+
T Consensus 66 c~~~l~~l~~~~~~~v~g~lLVAp~~~~--~-------------------~~~~~~~~~~f~~----------------- 107 (171)
T PF06821_consen 66 CLTALRWLAEQSQKKVAGALLVAPFDPD--D-------------------PEPFPPELDGFTP----------------- 107 (171)
T ss_dssp HHHHHHHHHHTCCSSEEEEEEES--SCG--C-------------------HHCCTCGGCCCTT-----------------
T ss_pred HHHHHHHHhhcccccccEEEEEcCCCcc--c-------------------ccchhhhcccccc-----------------
Confidence 99999998 8888999999999763210 0 0000000000000
Q ss_pred HhhcCChHHHHHHHHHHhhhchHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHHcCCCccEEEcCCCCCCCCCCChHHH
Q 045774 184 TLFSMRPDIALHVARTAFAADLRHVLGLVRVPVCIIQSSVDLSVPPAVAEYMRRHLGGPTVLEFLPTHGHLPHVSSPAPV 263 (275)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~ 263 (275)
.+ ...+.+|.++|.+++|+.+|.+.++++++.+. ++++.++++||+.--+--..+
T Consensus 108 -----~p------------------~~~l~~~~~viaS~nDp~vp~~~a~~~A~~l~--a~~~~~~~~GHf~~~~G~~~~ 162 (171)
T PF06821_consen 108 -----LP------------------RDPLPFPSIVIASDNDPYVPFERAQRLAQRLG--AELIILGGGGHFNAASGFGPW 162 (171)
T ss_dssp -----SH------------------CCHHHCCEEEEEETTBSSS-HHHHHHHHHHHT---EEEEETS-TTSSGGGTHSS-
T ss_pred -----Cc------------------ccccCCCeEEEEcCCCCccCHHHHHHHHHHcC--CCeEECCCCCCcccccCCCch
Confidence 00 01124677999999999999999999999996 478899999998765444333
No 88
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.48 E-value=1.4e-12 Score=120.86 Aligned_cols=207 Identities=22% Similarity=0.302 Sum_probs=122.4
Q ss_pred ceEEEEcCCCCChhh--hhhhHHHhhc-CCEEEEEccCCCCCC-----CCCCCCcccccchhHHHHHHHHHHHHhCC---
Q 045774 25 SIIVFSHGFGSDQSV--WSRVIPSFTR-AYRVISFDLMCSGSC-----DPTNYDFQRYATLDGYVDDLLSFLDALEI--- 93 (275)
Q Consensus 25 ~~ivllHG~~~~~~~--w~~~~~~l~~-~~~via~Dl~G~G~S-----~~~~~~~~~~~~~~~~a~dl~~~l~~l~~--- 93 (275)
|.||++||-+..... |...+..|+. +|-|+.++.||.+.- .....+. ....++++.+.+. ++.+.+.
T Consensus 395 P~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~~~~~~~~-g~~~~~D~~~~~~-~l~~~~~~d~ 472 (620)
T COG1506 395 PLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGREFADAIRGDW-GGVDLEDLIAAVD-ALVKLPLVDP 472 (620)
T ss_pred CEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHHHHHHhhhhcc-CCccHHHHHHHHH-HHHhCCCcCh
Confidence 689999997655544 4445555654 799999999966542 1111011 1123566666666 5555543
Q ss_pred CceEEEEeChhHHHHHHHHHhCCccccceeeecCCCCCcCCCCCcCCCCcchHHHHHHHHhhhhhhhhhhhcccccCCCC
Q 045774 94 DRCAFVGHSVSAMIGLLAAIHRPNLFSRLILIGGSPRFTNDGNYIGGIDPAHMEEVFRRMESNYESWVAGFVPMALGADV 173 (275)
Q Consensus 94 ~~~~lvGhS~GG~val~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (275)
+++.+.|||+||+.++..+.+.| ++++.+...+...+... . ......+ .+.........
T Consensus 473 ~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~~~~~---~---------------~~~~~~~--~~~~~~~~~~~ 531 (620)
T COG1506 473 ERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVDWLLY---F---------------GESTEGL--RFDPEENGGGP 531 (620)
T ss_pred HHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcchhhhh---c---------------cccchhh--cCCHHHhCCCc
Confidence 37999999999999999998888 77777665443221100 0 0000000 00000000000
Q ss_pred ChHHHHHHHHHhhcCChHHHHHHHHHHhhhchHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHHcCC---CccEEEcCC
Q 045774 174 PDMALQEFSRTLFSMRPDIALHVARTAFAADLRHVLGLVRVPVCIIQSSVDLSVPPAVAEYMRRHLGG---PTVLEFLPT 250 (275)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~---~~~~~~i~~ 250 (275)
.. ..+.+.+ .. ......++++|+|+|||++|.-+|.+.++.+.+.+.. ..+++++|+
T Consensus 532 ~~-~~~~~~~----~s---------------p~~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~ 591 (620)
T COG1506 532 PE-DREKYED----RS---------------PIFYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPD 591 (620)
T ss_pred cc-ChHHHHh----cC---------------hhhhhcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCC
Confidence 00 0011111 01 1122457899999999999999999888877765532 247889999
Q ss_pred CCCCCCC-CChHHHHHHHHHHHHhh
Q 045774 251 HGHLPHV-SSPAPVANAIQQLLRRR 274 (275)
Q Consensus 251 ~gH~~~~-e~p~~~~~~i~~fl~~~ 274 (275)
.||.+.- ++-..+.+.+.+|+++.
T Consensus 592 e~H~~~~~~~~~~~~~~~~~~~~~~ 616 (620)
T COG1506 592 EGHGFSRPENRVKVLKEILDWFKRH 616 (620)
T ss_pred CCcCCCCchhHHHHHHHHHHHHHHH
Confidence 9998877 44455667777777653
No 89
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.47 E-value=1.2e-11 Score=105.17 Aligned_cols=212 Identities=18% Similarity=0.175 Sum_probs=117.9
Q ss_pred ceEEEEcCCCCChhhhhhhHHHhhcCCEEEEEccCCCCCCCC--C--------------CCC-cccccchhHHHHHHHHH
Q 045774 25 SIIVFSHGFGSDQSVWSRVIPSFTRAYRVISFDLMCSGSCDP--T--------------NYD-FQRYATLDGYVDDLLSF 87 (275)
Q Consensus 25 ~~ivllHG~~~~~~~w~~~~~~l~~~~~via~Dl~G~G~S~~--~--------------~~~-~~~~~~~~~~a~dl~~~ 87 (275)
|.||..||.+.....|...+..-..+|-|+++|.||+|..++ . ..+ +..++ +..+..|+...
T Consensus 84 Pavv~~hGyg~~~~~~~~~~~~a~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~y-yr~~~~D~~ra 162 (320)
T PF05448_consen 84 PAVVQFHGYGGRSGDPFDLLPWAAAGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHITRGIDDNPEDYY-YRRVYLDAVRA 162 (320)
T ss_dssp EEEEEE--TT--GGGHHHHHHHHHTT-EEEEE--TTTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-H-HHHHHHHHHHH
T ss_pred CEEEEecCCCCCCCCcccccccccCCeEEEEecCCCCCCCCCCccccCCCCCccHHhcCccCchHHHH-HHHHHHHHHHH
Confidence 578999999999888887776666789999999999993211 0 001 22222 45566777766
Q ss_pred HHHhC------CCceEEEEeChhHHHHHHHHHhCCccccceeeecCCCCCcCCCCCcCCCCcchHHHHHHHHhhhhhhhh
Q 045774 88 LDALE------IDRCAFVGHSVSAMIGLLAAIHRPNLFSRLILIGGSPRFTNDGNYIGGIDPAHMEEVFRRMESNYESWV 161 (275)
Q Consensus 88 l~~l~------~~~~~lvGhS~GG~val~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (275)
++.+. .+++.+.|.|.||.+++.+|+..| ||++++..-+... .....+..-. .
T Consensus 163 vd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~vP~l~--------------d~~~~~~~~~---~--- 221 (320)
T PF05448_consen 163 VDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAADVPFLC--------------DFRRALELRA---D--- 221 (320)
T ss_dssp HHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEEESESSS--------------SHHHHHHHT--------
T ss_pred HHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEecCCCcc--------------chhhhhhcCC---c---
Confidence 66552 247899999999999999999886 7998887643211 0111110000 0
Q ss_pred hhhcccccCCCCChHHHHHHHHHhhcCChHHHHHHHHHHhhhchHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHHcCC
Q 045774 162 AGFVPMALGADVPDMALQEFSRTLFSMRPDIALHVARTAFAADLRHVLGLVRVPVCIIQSSVDLSVPPAVAEYMRRHLGG 241 (275)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~ 241 (275)
..+-.++..+.+.... .++........+.--|.....++|++|+++-.|-.|.++|+..+-.....+++
T Consensus 222 ----------~~~y~~~~~~~~~~d~-~~~~~~~v~~~L~Y~D~~nfA~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~~ 290 (320)
T PF05448_consen 222 ----------EGPYPEIRRYFRWRDP-HHEREPEVFETLSYFDAVNFARRIKCPVLFSVGLQDPVCPPSTQFAAYNAIPG 290 (320)
T ss_dssp ----------STTTHHHHHHHHHHSC-THCHHHHHHHHHHTT-HHHHGGG--SEEEEEEETT-SSS-HHHHHHHHCC--S
T ss_pred ----------cccHHHHHHHHhccCC-CcccHHHHHHHHhhhhHHHHHHHcCCCEEEEEecCCCCCCchhHHHHHhccCC
Confidence 0000112222221110 11111222222333466666778999999999999999999987767677777
Q ss_pred CccEEEcCCCCCCCCCCChHHH-HHHHHHHHHh
Q 045774 242 PTVLEFLPTHGHLPHVSSPAPV-ANAIQQLLRR 273 (275)
Q Consensus 242 ~~~~~~i~~~gH~~~~e~p~~~-~~~i~~fl~~ 273 (275)
.+++.+++..||- .+.++ .+...+||.+
T Consensus 291 ~K~l~vyp~~~He----~~~~~~~~~~~~~l~~ 319 (320)
T PF05448_consen 291 PKELVVYPEYGHE----YGPEFQEDKQLNFLKE 319 (320)
T ss_dssp SEEEEEETT--SS----TTHHHHHHHHHHHHHH
T ss_pred CeeEEeccCcCCC----chhhHHHHHHHHHHhc
Confidence 6789999999994 44444 5666667654
No 90
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.47 E-value=3.3e-12 Score=106.46 Aligned_cols=96 Identities=19% Similarity=0.213 Sum_probs=82.7
Q ss_pred eEEEEcCCCCChhhhhhhHHHhhcC----------CEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhCCCc
Q 045774 26 IIVFSHGFGSDQSVWSRVIPSFTRA----------YRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALEIDR 95 (275)
Q Consensus 26 ~ivllHG~~~~~~~w~~~~~~l~~~----------~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~~~ 95 (275)
|+|++|||+++-..|-.+++.|.+. |.|||+-+||+|.|+.+. ....+-...|.-+..++-.||.++
T Consensus 154 PlLl~HGwPGsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~s---k~GFn~~a~ArvmrkLMlRLg~nk 230 (469)
T KOG2565|consen 154 PLLLLHGWPGSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPS---KTGFNAAATARVMRKLMLRLGYNK 230 (469)
T ss_pred ceEEecCCCchHHHHHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCCc---cCCccHHHHHHHHHHHHHHhCcce
Confidence 7999999999999999999988652 789999999999997421 112356677888888999999999
Q ss_pred eEEEEeChhHHHHHHHHHhCCccccceee
Q 045774 96 CAFVGHSVSAMIGLLAAIHRPNLFSRLIL 124 (275)
Q Consensus 96 ~~lvGhS~GG~val~~a~~~p~~v~~lvl 124 (275)
+.+=|-.||+.|+..+|..||++|.++=+
T Consensus 231 ffiqGgDwGSiI~snlasLyPenV~GlHl 259 (469)
T KOG2565|consen 231 FFIQGGDWGSIIGSNLASLYPENVLGLHL 259 (469)
T ss_pred eEeecCchHHHHHHHHHhhcchhhhHhhh
Confidence 99999999999999999999999999854
No 91
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.45 E-value=1e-11 Score=107.74 Aligned_cols=244 Identities=15% Similarity=0.159 Sum_probs=141.2
Q ss_pred ceEEEEcCCCCChhhh-hhhHHHhhcCCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhCCCceEEEEeCh
Q 045774 25 SIIVFSHGFGSDQSVW-SRVIPSFTRAYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALEIDRCAFVGHSV 103 (275)
Q Consensus 25 ~~ivllHG~~~~~~~w-~~~~~~l~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~ 103 (275)
++||+|.-+....... +.+++.|.+++.|+..|+.--+..... ....+++++++-+.++++++|.+ ++|+|+|+
T Consensus 103 ~pvLiV~Pl~g~~~~L~RS~V~~Ll~g~dVYl~DW~~p~~vp~~----~~~f~ldDYi~~l~~~i~~~G~~-v~l~GvCq 177 (406)
T TIGR01849 103 PAVLIVAPMSGHYATLLRSTVEALLPDHDVYITDWVNARMVPLS----AGKFDLEDYIDYLIEFIRFLGPD-IHVIAVCQ 177 (406)
T ss_pred CcEEEEcCCchHHHHHHHHHHHHHhCCCcEEEEeCCCCCCCchh----cCCCCHHHHHHHHHHHHHHhCCC-CcEEEEch
Confidence 6899999986443333 456676666999999999987754211 11236999999999999999877 99999999
Q ss_pred hHHHHHHHHHhC-----CccccceeeecCCCCCcCCCCCcCCCCcc-hHHHHHHHH------------------------
Q 045774 104 SAMIGLLAAIHR-----PNLFSRLILIGGSPRFTNDGNYIGGIDPA-HMEEVFRRM------------------------ 153 (275)
Q Consensus 104 GG~val~~a~~~-----p~~v~~lvli~~~~~~~~~~~~~~~~~~~-~~~~~~~~~------------------------ 153 (275)
||..++.+++.. |+++++++++++.-.+.......+.+... .++.+...+
T Consensus 178 gG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~~p~~v~~~a~~~~i~~~~~~~i~~vp~~~~g~gr~v~PG~~~~~~ 257 (406)
T TIGR01849 178 PAVPVLAAVALMAENEPPAQPRSMTLMGGPIDARASPTVVNELAREKPIEWFQHNVIMRVPFPYPGAGRLVYPGFLQLAG 257 (406)
T ss_pred hhHHHHHHHHHHHhcCCCCCcceEEEEecCccCCCCCchHHHHhhcccHHHHHHHhhhccCccccCCCCcccCHHHHHHH
Confidence 999977655554 77899999998754332111111111000 000000000
Q ss_pred --hhhh----hhhhhhhcccccCCCCChHHHHHHHHHhh---cCChHHHHHHHHHHhhhch-----------HhhhCCCC
Q 045774 154 --ESNY----ESWVAGFVPMALGADVPDMALQEFSRTLF---SMRPDIALHVARTAFAADL-----------RHVLGLVR 213 (275)
Q Consensus 154 --~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~d~-----------~~~l~~i~ 213 (275)
..++ ..+...+.....+..........+.+.+. .+..+....+.+.++..+. .-.+++|+
T Consensus 258 F~~mnp~r~~~~~~~~~~~l~~gd~~~~~~~~~f~~~y~d~~dlpge~y~~~v~~vf~~n~L~~G~l~v~G~~Vdl~~I~ 337 (406)
T TIGR01849 258 FISMNLDRHTKAHSDFFLHLVKGDGQEADKHRIFYDEYLAVMDMTAEFYLQTIDVVFQQFLLPQGKFIVEGKRVDPGAIT 337 (406)
T ss_pred HHHcCcchHHHHHHHHHHHHhcCCcchHHHHHHHHHHhhhccCCcHHHHHHHHHHHHHhCCccCCcEEECCEEecHHHCc
Confidence 0000 00000000000011111111222222211 1223333334433333221 11256789
Q ss_pred -CcEEEEEeCCCCCCCHHHHHHHHHHc---CCC-ccEEEcCCCCCCCCCCC---hHHHHHHHHHHHHh
Q 045774 214 -VPVCIIQSSVDLSVPPAVAEYMRRHL---GGP-TVLEFLPTHGHLPHVSS---PAPVANAIQQLLRR 273 (275)
Q Consensus 214 -~P~l~i~G~~D~~~~~~~~~~~~~~~---~~~-~~~~~i~~~gH~~~~e~---p~~~~~~i~~fl~~ 273 (275)
+|++.|.|++|.++|+...+.+.+.+ ++. ++..+.+++||.-.+-- ++++-..|.+||.+
T Consensus 338 ~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~~~~i~P~i~~wl~~ 405 (406)
T TIGR01849 338 RVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRFREEIYPLVREFIRR 405 (406)
T ss_pred ccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeChhhhhhhchHHHHHHHh
Confidence 99999999999999999888887763 543 23556678999866543 35677788888864
No 92
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.45 E-value=1.5e-11 Score=105.35 Aligned_cols=225 Identities=14% Similarity=0.162 Sum_probs=117.4
Q ss_pred CCceEEEEcCCCCCh-hhhh-hhH-HHhhcCCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhC----CCc
Q 045774 23 GQSIIVFSHGFGSDQ-SVWS-RVI-PSFTRAYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALE----IDR 95 (275)
Q Consensus 23 g~~~ivllHG~~~~~-~~w~-~~~-~~l~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~----~~~ 95 (275)
..|.||+|||+.+++ +.+- .++ ....++|+|+.+..||+|.|.-.. +.-|+ ..+.+|+.++++++. ..+
T Consensus 124 ~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~LtT--pr~f~--ag~t~Dl~~~v~~i~~~~P~a~ 199 (409)
T KOG1838|consen 124 TDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSKLTT--PRLFT--AGWTEDLREVVNHIKKRYPQAP 199 (409)
T ss_pred CCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCCccCC--Cceee--cCCHHHHHHHHHHHHHhCCCCc
Confidence 347899999986554 4332 223 334458999999999999985321 11121 346667777776653 347
Q ss_pred eEEEEeChhHHHHHHHHHhCCcc---ccceeeecCCCCCcCCCCCcCCCCcchHHHHHHHHhhhhhhhhhhhcccccCC-
Q 045774 96 CAFVGHSVSAMIGLLAAIHRPNL---FSRLILIGGSPRFTNDGNYIGGIDPAHMEEVFRRMESNYESWVAGFVPMALGA- 171 (275)
Q Consensus 96 ~~lvGhS~GG~val~~a~~~p~~---v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 171 (275)
...||.||||++.+.+.....++ +.++.+.++.-.+...........+...++.+ ..+...............
T Consensus 200 l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~~~~~~~~~~~~~~~y~~~l---~~~l~~~~~~~r~~~~~~~ 276 (409)
T KOG1838|consen 200 LFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLLAASRSIETPLYRRFYNRAL---TLNLKRIVLRHRHTLFEDP 276 (409)
T ss_pred eEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchhhhhhhHHhcccchHHHHHHH---HHhHHHHHhhhhhhhhhcc
Confidence 89999999999999877665443 34444443321110000000000011111111 111111100000000000
Q ss_pred -----CCChHHHHHHHHHhhc--CC-hHHHHHHHHHHhhhchHhhhCCCCCcEEEEEeCCCCCCCHHHHH-HHHHHcCCC
Q 045774 172 -----DVPDMALQEFSRTLFS--MR-PDIALHVARTAFAADLRHVLGLVRVPVCIIQSSVDLSVPPAVAE-YMRRHLGGP 242 (275)
Q Consensus 172 -----~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~d~~~~l~~i~~P~l~i~G~~D~~~~~~~~~-~~~~~~~~~ 242 (275)
......+++|.+.+.. .. +. ...+ -........+.+|++|+++|...+|+++|..... ...+..|+
T Consensus 277 vd~d~~~~~~SvreFD~~~t~~~~gf~~-~deY---Y~~aSs~~~v~~I~VP~L~ina~DDPv~p~~~ip~~~~~~np~- 351 (409)
T KOG1838|consen 277 VDFDVILKSRSVREFDEALTRPMFGFKS-VDEY---YKKASSSNYVDKIKVPLLCINAADDPVVPEEAIPIDDIKSNPN- 351 (409)
T ss_pred chhhhhhhcCcHHHHHhhhhhhhcCCCc-HHHH---HhhcchhhhcccccccEEEEecCCCCCCCcccCCHHHHhcCCc-
Confidence 0011123444433211 00 11 1111 1123455668899999999999999999986543 23334454
Q ss_pred ccEEEcCCCCCCCCCCC
Q 045774 243 TVLEFLPTHGHLPHVSS 259 (275)
Q Consensus 243 ~~~~~i~~~gH~~~~e~ 259 (275)
.-+.+...+||.-++|.
T Consensus 352 v~l~~T~~GGHlgfleg 368 (409)
T KOG1838|consen 352 VLLVITSHGGHLGFLEG 368 (409)
T ss_pred EEEEEeCCCceeeeecc
Confidence 34555577999999998
No 93
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.40 E-value=8.2e-12 Score=107.54 Aligned_cols=209 Identities=13% Similarity=0.139 Sum_probs=108.7
Q ss_pred ceEEEEcCCCCChhhh-hhhHHHhh-cCCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhC---CCceEEE
Q 045774 25 SIIVFSHGFGSDQSVW-SRVIPSFT-RAYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALE---IDRCAFV 99 (275)
Q Consensus 25 ~~ivllHG~~~~~~~w-~~~~~~l~-~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~---~~~~~lv 99 (275)
|+||++.|+-+-.+.+ ....+.|. .++.++++|+||.|.|.....+ . +.+.+-+.+.+.+.... .+++.++
T Consensus 191 P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~-~---D~~~l~~aVLd~L~~~p~VD~~RV~~~ 266 (411)
T PF06500_consen 191 PTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLT-Q---DSSRLHQAVLDYLASRPWVDHTRVGAW 266 (411)
T ss_dssp EEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S--S----CCHHHHHHHHHHHHSTTEEEEEEEEE
T ss_pred CEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCCCC-c---CHHHHHHHHHHHHhcCCccChhheEEE
Confidence 5677777887776554 44456665 5899999999999998532222 1 12445566666666553 3589999
Q ss_pred EeChhHHHHHHHHHhCCccccceeeecCCCCCcCCCCCcCCCCcchHHHHHHHHhhhhhhhhhhhcccccCCCCChHHHH
Q 045774 100 GHSVSAMIGLLAAIHRPNLFSRLILIGGSPRFTNDGNYIGGIDPAHMEEVFRRMESNYESWVAGFVPMALGADVPDMALQ 179 (275)
Q Consensus 100 GhS~GG~val~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (275)
|.|+||.+|.++|..+++|++++|.+++..... |+.. ..+ ...+..+...+... .+....+ .+
T Consensus 267 G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~--------ft~~---~~~---~~~P~my~d~LA~r-lG~~~~~--~~ 329 (411)
T PF06500_consen 267 GFSFGGYYAVRLAALEDPRLKAVVALGAPVHHF--------FTDP---EWQ---QRVPDMYLDVLASR-LGMAAVS--DE 329 (411)
T ss_dssp EETHHHHHHHHHHHHTTTT-SEEEEES---SCG--------GH-H---HHH---TTS-HHHHHHHHHH-CT-SCE---HH
T ss_pred EeccchHHHHHHHHhcccceeeEeeeCchHhhh--------hccH---HHH---hcCCHHHHHHHHHH-hCCccCC--HH
Confidence 999999999999999999999999987643211 0000 000 00000000000000 0000000 11
Q ss_pred HHHHHhhcCChHHHHHHHHHHhhhch--Hhhh--CCCCCcEEEEEeCCCCCCCHHHHHHHHHHcCCCccEEEcCCCCCCC
Q 045774 180 EFSRTLFSMRPDIALHVARTAFAADL--RHVL--GLVRVPVCIIQSSVDLSVPPAVAEYMRRHLGGPTVLEFLPTHGHLP 255 (275)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~d~--~~~l--~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~ 255 (275)
.+... +....+ +..+ ++.++|+|.+.|++|.++|.+-.+-++..-.+ .+...++... +
T Consensus 330 ~l~~e---------------l~~~SLk~qGlL~~rr~~~plL~i~~~~D~v~P~eD~~lia~~s~~-gk~~~~~~~~--~ 391 (411)
T PF06500_consen 330 SLRGE---------------LNKFSLKTQGLLSGRRCPTPLLAINGEDDPVSPIEDSRLIAESSTD-GKALRIPSKP--L 391 (411)
T ss_dssp HHHHH---------------GGGGSTTTTTTTTSS-BSS-EEEEEETT-SSS-HHHHHHHHHTBTT--EEEEE-SSS--H
T ss_pred HHHHH---------------HHhcCcchhccccCCCCCcceEEeecCCCCCCCHHHHHHHHhcCCC-CceeecCCCc--c
Confidence 11111 111111 2234 67899999999999999999988766665443 4566676544 2
Q ss_pred CCCChHHHHHHHHHHHHh
Q 045774 256 HVSSPAPVANAIQQLLRR 273 (275)
Q Consensus 256 ~~e~p~~~~~~i~~fl~~ 273 (275)
+.-.| .-...+.+||+.
T Consensus 392 ~~gy~-~al~~~~~Wl~~ 408 (411)
T PF06500_consen 392 HMGYP-QALDEIYKWLED 408 (411)
T ss_dssp HHHHH-HHHHHHHHHHHH
T ss_pred ccchH-HHHHHHHHHHHH
Confidence 33333 444666677764
No 94
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.39 E-value=2.1e-10 Score=95.40 Aligned_cols=103 Identities=17% Similarity=0.271 Sum_probs=84.4
Q ss_pred ceEEEEcCCCCChhhhhhhHHHhh----cCCEEEEEccCCCCCCCCCCC--CcccccchhHHHHHHHHHHHHhCC-----
Q 045774 25 SIIVFSHGFGSDQSVWSRVIPSFT----RAYRVISFDLMCSGSCDPTNY--DFQRYATLDGYVDDLLSFLDALEI----- 93 (275)
Q Consensus 25 ~~ivllHG~~~~~~~w~~~~~~l~----~~~~via~Dl~G~G~S~~~~~--~~~~~~~~~~~a~dl~~~l~~l~~----- 93 (275)
..|||++|+++-.+.|..++..|. .++.|+++.+.||-.++.... ...+.++++++++--.++++++-.
T Consensus 3 ~li~~IPGNPGlv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~~~ 82 (266)
T PF10230_consen 3 PLIVFIPGNPGLVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKNKP 82 (266)
T ss_pred EEEEEECCCCChHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhcCC
Confidence 469999999999999999988775 469999999999987653210 113456899999999988887633
Q ss_pred -CceEEEEeChhHHHHHHHHHhCC---ccccceeeecC
Q 045774 94 -DRCAFVGHSVSAMIGLLAAIHRP---NLFSRLILIGG 127 (275)
Q Consensus 94 -~~~~lvGhS~GG~val~~a~~~p---~~v~~lvli~~ 127 (275)
.+++|+|||.|+++++++..+.| .+|++++++=+
T Consensus 83 ~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfP 120 (266)
T PF10230_consen 83 NVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFP 120 (266)
T ss_pred CCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCC
Confidence 36999999999999999999999 78999988844
No 95
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.38 E-value=2.5e-11 Score=98.33 Aligned_cols=166 Identities=19% Similarity=0.231 Sum_probs=100.7
Q ss_pred CceEEEEcCCCCChhhhhhhHHHhhc-CCEEEEEccCCCCCCCCCCCC--ccccc-----chhHHHHHHHHHHHHhC---
Q 045774 24 QSIIVFSHGFGSDQSVWSRVIPSFTR-AYRVISFDLMCSGSCDPTNYD--FQRYA-----TLDGYVDDLLSFLDALE--- 92 (275)
Q Consensus 24 ~~~ivllHG~~~~~~~w~~~~~~l~~-~~~via~Dl~G~G~S~~~~~~--~~~~~-----~~~~~a~dl~~~l~~l~--- 92 (275)
.|.||++|++.+-...-+.+.+.|++ +|.|+++|+-+-....+.... ..... ..+...+++.+.++.|.
T Consensus 14 ~~~Vvv~~d~~G~~~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~~ 93 (218)
T PF01738_consen 14 RPAVVVIHDIFGLNPNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYLRAQP 93 (218)
T ss_dssp EEEEEEE-BTTBS-HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHHHCTT
T ss_pred CCEEEEEcCCCCCchHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHhcc
Confidence 36899999987766777788888876 799999998755441111100 00000 12355677766666552
Q ss_pred ---CCceEEEEeChhHHHHHHHHHhCCccccceeeecCCCCCcCCCCCcCCCCcchHHHHHHHHhhhhhhhhhhhccccc
Q 045774 93 ---IDRCAFVGHSVSAMIGLLAAIHRPNLFSRLILIGGSPRFTNDGNYIGGIDPAHMEEVFRRMESNYESWVAGFVPMAL 169 (275)
Q Consensus 93 ---~~~~~lvGhS~GG~val~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (275)
.+++.++|+||||.+++.+|.+. +++++.|..-+.. . .
T Consensus 94 ~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~~-----------~-~-------------------------- 134 (218)
T PF01738_consen 94 EVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGGS-----------P-P-------------------------- 134 (218)
T ss_dssp TCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-SS-----------S-G--------------------------
T ss_pred ccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCCC-----------C-C--------------------------
Confidence 24799999999999999998766 6788877652200 0 0
Q ss_pred CCCCChHHHHHHHHHhhcCChHHHHHHHHHHhhhchHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHHc---CCCccEE
Q 045774 170 GADVPDMALQEFSRTLFSMRPDIALHVARTAFAADLRHVLGLVRVPVCIIQSSVDLSVPPAVAEYMRRHL---GGPTVLE 246 (275)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~---~~~~~~~ 246 (275)
........++++|+++++|++|..+|.+..+.+.+.+ ....+++
T Consensus 135 ---------------------------------~~~~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~ 181 (218)
T PF01738_consen 135 ---------------------------------PPPLEDAPKIKAPVLILFGENDPFFPPEEVEALEEALKAAGVDVEVH 181 (218)
T ss_dssp ---------------------------------GGHHHHGGG--S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEE
T ss_pred ---------------------------------CcchhhhcccCCCEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEE
Confidence 0001113356899999999999999998766666655 2225788
Q ss_pred EcCCCCCCCCCCChH
Q 045774 247 FLPTHGHLPHVSSPA 261 (275)
Q Consensus 247 ~i~~~gH~~~~e~p~ 261 (275)
++++++|.-.....+
T Consensus 182 ~y~ga~HgF~~~~~~ 196 (218)
T PF01738_consen 182 VYPGAGHGFANPSRP 196 (218)
T ss_dssp EETT--TTTTSTTST
T ss_pred ECCCCcccccCCCCc
Confidence 999999987665544
No 96
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.37 E-value=1e-10 Score=91.60 Aligned_cols=179 Identities=14% Similarity=0.109 Sum_probs=105.8
Q ss_pred EEEEcCCCCChhhhhhh--HHHhhc---CCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhCCCceEEEEe
Q 045774 27 IVFSHGFGSDQSVWSRV--IPSFTR---AYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALEIDRCAFVGH 101 (275)
Q Consensus 27 ivllHG~~~~~~~w~~~--~~~l~~---~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGh 101 (275)
|+.+|||.+++...+.. .+.+++ ..+++++|++. +.....+.+.+++++...+.+.|||+
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~~---------------~p~~a~~~l~~~i~~~~~~~~~liGS 66 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLPP---------------FPEEAIAQLEQLIEELKPENVVLIGS 66 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCCc---------------CHHHHHHHHHHHHHhCCCCCeEEEEE
Confidence 78999999999888753 344554 24667776542 24556678888998888778999999
Q ss_pred ChhHHHHHHHHHhCCccccceeeecCCCCCcCCCCCcCCCCcchHHHHHHHHhhh-hhhhhhhhcccccCCCCChHHHHH
Q 045774 102 SVSAMIGLLAAIHRPNLFSRLILIGGSPRFTNDGNYIGGIDPAHMEEVFRRMESN-YESWVAGFVPMALGADVPDMALQE 180 (275)
Q Consensus 102 S~GG~val~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 180 (275)
||||+.|..+|.+++ +++ |+|+++.... ..+...+... ...+.+.+ ...+.
T Consensus 67 SlGG~~A~~La~~~~--~~a-vLiNPav~p~--------------~~l~~~iG~~~~~~~~e~~-------~~~~~---- 118 (187)
T PF05728_consen 67 SLGGFYATYLAERYG--LPA-VLINPAVRPY--------------ELLQDYIGEQTNPYTGESY-------ELTEE---- 118 (187)
T ss_pred ChHHHHHHHHHHHhC--CCE-EEEcCCCCHH--------------HHHHHhhCccccCCCCccc-------eechH----
Confidence 999999999999886 333 7887643210 0111111100 00000000 00000
Q ss_pred HHHHhhcCChHHHHHHHHHHhhhchHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHHcCCCccEEEcCCCCCCCCCCCh
Q 045774 181 FSRTLFSMRPDIALHVARTAFAADLRHVLGLVRVPVCIIQSSVDLSVPPAVAEYMRRHLGGPTVLEFLPTHGHLPHVSSP 260 (275)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p 260 (275)
....+. .+......-..+++++.++.|++++...+. +...+ ...++.++++|- +++-
T Consensus 119 ~~~~l~-----------------~l~~~~~~~~~~~lvll~~~DEvLd~~~a~---~~~~~-~~~~i~~ggdH~--f~~f 175 (187)
T PF05728_consen 119 HIEELK-----------------ALEVPYPTNPERYLVLLQTGDEVLDYREAV---AKYRG-CAQIIEEGGDHS--FQDF 175 (187)
T ss_pred hhhhcc-----------------eEeccccCCCccEEEEEecCCcccCHHHHH---HHhcC-ceEEEEeCCCCC--CccH
Confidence 000000 000001233678999999999999885432 33344 344456788884 4566
Q ss_pred HHHHHHHHHHH
Q 045774 261 APVANAIQQLL 271 (275)
Q Consensus 261 ~~~~~~i~~fl 271 (275)
++....|.+|+
T Consensus 176 ~~~l~~i~~f~ 186 (187)
T PF05728_consen 176 EEYLPQIIAFL 186 (187)
T ss_pred HHHHHHHHHhh
Confidence 77777887776
No 97
>COG0400 Predicted esterase [General function prediction only]
Probab=99.37 E-value=2.9e-11 Score=95.92 Aligned_cols=170 Identities=21% Similarity=0.280 Sum_probs=113.0
Q ss_pred CceEEEEcCCCCChhhhhhhHHHhhcCCEEEEEccCCCCCCC------------CCCCCccc-ccchhHHHHHHHHHHHH
Q 045774 24 QSIIVFSHGFGSDQSVWSRVIPSFTRAYRVISFDLMCSGSCD------------PTNYDFQR-YATLDGYVDDLLSFLDA 90 (275)
Q Consensus 24 ~~~ivllHG~~~~~~~w~~~~~~l~~~~~via~Dl~G~G~S~------------~~~~~~~~-~~~~~~~a~dl~~~l~~ 90 (275)
.|.|||+||+|++...+-+....+..+++++.+ | |.+. ....+.+. ......+++-+.+..++
T Consensus 18 ~~~iilLHG~Ggde~~~~~~~~~~~P~~~~is~--r--G~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~~ 93 (207)
T COG0400 18 APLLILLHGLGGDELDLVPLPELILPNATLVSP--R--GPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAEE 93 (207)
T ss_pred CcEEEEEecCCCChhhhhhhhhhcCCCCeEEcC--C--CCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHHHH
Confidence 346999999999988888866555666776665 2 2221 00111111 01234555556666667
Q ss_pred hCC--CceEEEEeChhHHHHHHHHHhCCccccceeeecCCCCCcCCCCCcCCCCcchHHHHHHHHhhhhhhhhhhhcccc
Q 045774 91 LEI--DRCAFVGHSVSAMIGLLAAIHRPNLFSRLILIGGSPRFTNDGNYIGGIDPAHMEEVFRRMESNYESWVAGFVPMA 168 (275)
Q Consensus 91 l~~--~~~~lvGhS~GG~val~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (275)
.++ ++++++|+|=|+++++....++|+.++++++.++.......
T Consensus 94 ~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~~---------------------------------- 139 (207)
T COG0400 94 YGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEPE---------------------------------- 139 (207)
T ss_pred hCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCCc----------------------------------
Confidence 777 68999999999999999999999999999988653211000
Q ss_pred cCCCCChHHHHHHHHHhhcCChHHHHHHHHHHhhhchHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHHcCC---CccE
Q 045774 169 LGADVPDMALQEFSRTLFSMRPDIALHVARTAFAADLRHVLGLVRVPVCIIQSSVDLSVPPAVAEYMRRHLGG---PTVL 245 (275)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~---~~~~ 245 (275)
. . -..-.+|+++++|+.|+++|....+++++.+.. ....
T Consensus 140 ----------------~---~-------------------~~~~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~ 181 (207)
T COG0400 140 ----------------L---L-------------------PDLAGTPILLSHGTEDPVVPLALAEALAEYLTASGADVEV 181 (207)
T ss_pred ----------------c---c-------------------cccCCCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEE
Confidence 0 0 001258999999999999999888877765432 2356
Q ss_pred EEcCCCCCCCCCCChHHHHHHHHHHHHhh
Q 045774 246 EFLPTHGHLPHVSSPAPVANAIQQLLRRR 274 (275)
Q Consensus 246 ~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 274 (275)
..++ .||.+..|. .+.+++|+.++
T Consensus 182 ~~~~-~GH~i~~e~----~~~~~~wl~~~ 205 (207)
T COG0400 182 RWHE-GGHEIPPEE----LEAARSWLANT 205 (207)
T ss_pred EEec-CCCcCCHHH----HHHHHHHHHhc
Confidence 6666 899776554 35555566654
No 98
>PRK10162 acetyl esterase; Provisional
Probab=99.32 E-value=2.4e-10 Score=97.85 Aligned_cols=99 Identities=20% Similarity=0.281 Sum_probs=69.0
Q ss_pred CCceEEEEcCCC---CChhhhhhhHHHhhc--CCEEEEEccCCCCCCCCCCCCcccccchhHH---HHHHHHHHHHhCC-
Q 045774 23 GQSIIVFSHGFG---SDQSVWSRVIPSFTR--AYRVISFDLMCSGSCDPTNYDFQRYATLDGY---VDDLLSFLDALEI- 93 (275)
Q Consensus 23 g~~~ivllHG~~---~~~~~w~~~~~~l~~--~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~---a~dl~~~l~~l~~- 93 (275)
+.|+||++||-+ ++...|+.++..|+. ++.|+++|.|....... ...+++. .+.+.+..+.+++
T Consensus 80 ~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~~~-------p~~~~D~~~a~~~l~~~~~~~~~d 152 (318)
T PRK10162 80 SQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEARF-------PQAIEEIVAVCCYFHQHAEDYGIN 152 (318)
T ss_pred CCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCCCC-------CCcHHHHHHHHHHHHHhHHHhCCC
Confidence 346899999954 566788888888875 69999999996543211 0123332 2333333445665
Q ss_pred -CceEEEEeChhHHHHHHHHHhC------CccccceeeecCC
Q 045774 94 -DRCAFVGHSVSAMIGLLAAIHR------PNLFSRLILIGGS 128 (275)
Q Consensus 94 -~~~~lvGhS~GG~val~~a~~~------p~~v~~lvli~~~ 128 (275)
++++|+|+|+||.+++.++.+. |.++++++++.+.
T Consensus 153 ~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~ 194 (318)
T PRK10162 153 MSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGL 194 (318)
T ss_pred hhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCc
Confidence 4799999999999999888653 4678888888654
No 99
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.32 E-value=6.5e-12 Score=84.24 Aligned_cols=73 Identities=25% Similarity=0.490 Sum_probs=59.5
Q ss_pred hhceEEecCC---CceEEEEcCCCCChhhhhhhHHHhhc-CCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHH
Q 045774 14 ALNVRVVGQG---QSIIVFSHGFGSDQSVWSRVIPSFTR-AYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLD 89 (275)
Q Consensus 14 ~~~~~~~g~g---~~~ivllHG~~~~~~~w~~~~~~l~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~ 89 (275)
+|+++.+.+. +.+|+++||++.++..|..+++.|++ +|.|+++|+||||.|+... ....+++++++|+.++++
T Consensus 3 ~L~~~~w~p~~~~k~~v~i~HG~~eh~~ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~r---g~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 3 KLFYRRWKPENPPKAVVVIVHGFGEHSGRYAHLAEFLAEQGYAVFAYDHRGHGRSEGKR---GHIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred EEEEEEecCCCCCCEEEEEeCCcHHHHHHHHHHHHHHHhCCCEEEEECCCcCCCCCCcc---cccCCHHHHHHHHHHHhC
Confidence 4677776432 34899999999999999999999987 7999999999999997421 223479999999999874
No 100
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.32 E-value=6.4e-11 Score=95.06 Aligned_cols=210 Identities=19% Similarity=0.253 Sum_probs=131.0
Q ss_pred ceEEEEcCCCCChhhhhhhHHHhhcCCEEEEEccCCCCCCCC----CC-------------CC-cccccchhHHHHHHHH
Q 045774 25 SIIVFSHGFGSDQSVWSRVIPSFTRAYRVISFDLMCSGSCDP----TN-------------YD-FQRYATLDGYVDDLLS 86 (275)
Q Consensus 25 ~~ivllHG~~~~~~~w~~~~~~l~~~~~via~Dl~G~G~S~~----~~-------------~~-~~~~~~~~~~a~dl~~ 86 (275)
|-||--||.+++...|..+...-..+|-|+.+|.||.|.|+. +. .| ...|. +...-.|+..
T Consensus 84 P~vV~fhGY~g~~g~~~~~l~wa~~Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~mtrGilD~kd~yy-yr~v~~D~~~ 162 (321)
T COG3458 84 PAVVQFHGYGGRGGEWHDMLHWAVAGYAVFVMDVRGQGSSSQDTADPPGGPSDPGFMTRGILDRKDTYY-YRGVFLDAVR 162 (321)
T ss_pred ceEEEEeeccCCCCCccccccccccceeEEEEecccCCCccccCCCCCCCCcCCceeEeecccCCCceE-EeeehHHHHH
Confidence 568889999999999988876666689999999999998831 10 01 11222 3334445555
Q ss_pred HHHHh------CCCceEEEEeChhHHHHHHHHHhCCccccceeeecCCCCCcCCCCCcCCCCcchHHHHHHHHhhhhhhh
Q 045774 87 FLDAL------EIDRCAFVGHSVSAMIGLLAAIHRPNLFSRLILIGGSPRFTNDGNYIGGIDPAHMEEVFRRMESNYESW 160 (275)
Q Consensus 87 ~l~~l------~~~~~~lvGhS~GG~val~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (275)
+++.+ +-+++.+-|.|-||.+++.+++..| |+|+++..-+. + ..+. .+
T Consensus 163 ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-rik~~~~~~Pf---l------~df~----------------r~ 216 (321)
T COG3458 163 AVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RIKAVVADYPF---L------SDFP----------------RA 216 (321)
T ss_pred HHHHHhccCccchhheEEeccccCchhhhhhhhcCh-hhhcccccccc---c------ccch----------------hh
Confidence 54433 3457999999999999999998777 89998765321 1 1110 00
Q ss_pred hhhhcccccCCCCChHHHHHHHHHhhcCChHHHHHHHHHHhhhchHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHHcC
Q 045774 161 VAGFVPMALGADVPDMALQEFSRTLFSMRPDIALHVARTAFAADLRHVLGLVRVPVCIIQSSVDLSVPPAVAEYMRRHLG 240 (275)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~ 240 (275)
.+. ....+..++..|.++. ++. ......++.--|......++++|+|+..|--|.++|+..+=.+...+.
T Consensus 217 i~~------~~~~~ydei~~y~k~h---~~~-e~~v~~TL~yfD~~n~A~RiK~pvL~svgL~D~vcpPstqFA~yN~l~ 286 (321)
T COG3458 217 IEL------ATEGPYDEIQTYFKRH---DPK-EAEVFETLSYFDIVNLAARIKVPVLMSVGLMDPVCPPSTQFAAYNALT 286 (321)
T ss_pred eee------cccCcHHHHHHHHHhc---Cch-HHHHHHHHhhhhhhhHHHhhccceEEeecccCCCCCChhhHHHhhccc
Confidence 000 0000001122222211 111 112222333345666677899999999999999999998766667777
Q ss_pred CCccEEEcCCCCCCCCCCChHHHHHHHHHHHHhh
Q 045774 241 GPTVLEFLPTHGHLPHVSSPAPVANAIQQLLRRR 274 (275)
Q Consensus 241 ~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 274 (275)
..+++++++.=+| .+-|.-.++.+-.|+...
T Consensus 287 ~~K~i~iy~~~aH---e~~p~~~~~~~~~~l~~l 317 (321)
T COG3458 287 TSKTIEIYPYFAH---EGGPGFQSRQQVHFLKIL 317 (321)
T ss_pred CCceEEEeecccc---ccCcchhHHHHHHHHHhh
Confidence 6667887776555 555655566666677654
No 101
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=99.30 E-value=1.2e-10 Score=95.58 Aligned_cols=203 Identities=19% Similarity=0.229 Sum_probs=118.6
Q ss_pred ceEEEEcCCCCChhhhhhhHHHhh-c-C--CEEEEEccCCCCCC-----------CC---CCCCcccc-cchhHHHHHHH
Q 045774 25 SIIVFSHGFGSDQSVWSRVIPSFT-R-A--YRVISFDLMCSGSC-----------DP---TNYDFQRY-ATLDGYVDDLL 85 (275)
Q Consensus 25 ~~ivllHG~~~~~~~w~~~~~~l~-~-~--~~via~Dl~G~G~S-----------~~---~~~~~~~~-~~~~~~a~dl~ 85 (275)
.|.||+||++++...+..++..+. + + ..++.++----|.- .| ...+ ... .++...++.+.
T Consensus 12 tPTifihG~~gt~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~-~n~~~~~~~qa~wl~ 90 (255)
T PF06028_consen 12 TPTIFIHGYGGTANSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFE-DNRNANYKKQAKWLK 90 (255)
T ss_dssp EEEEEE--TTGGCCCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEES-STT-CHHHHHHHHHH
T ss_pred CcEEEECCCCCChhHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEec-CCCcCCHHHHHHHHH
Confidence 378999999999999999999997 4 2 45555554444411 01 0000 111 25778888888
Q ss_pred HHHHHh----CCCceEEEEeChhHHHHHHHHHhCCc-----cccceeeecCCCCCcCCCCCcCCCCcchHHHHHHHHhhh
Q 045774 86 SFLDAL----EIDRCAFVGHSVSAMIGLLAAIHRPN-----LFSRLILIGGSPRFTNDGNYIGGIDPAHMEEVFRRMESN 156 (275)
Q Consensus 86 ~~l~~l----~~~~~~lvGhS~GG~val~~a~~~p~-----~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (275)
.++.+| +++++.+|||||||++++.++..+-+ ++.++|.|++.-......... ..
T Consensus 91 ~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~~----~~------------ 154 (255)
T PF06028_consen 91 KVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMNDD----QN------------ 154 (255)
T ss_dssp HHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC-----TT------------
T ss_pred HHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCcccccccc----ch------------
Confidence 888777 67899999999999999999888643 689999998743211100000 00
Q ss_pred hhhhhhhhcccccCCCCChHHHHHHHHHhhcCChHHHHHHHHHHhhhchHhhhCCCCCcEEEEEeC------CCCCCCHH
Q 045774 157 YESWVAGFVPMALGADVPDMALQEFSRTLFSMRPDIALHVARTAFAADLRHVLGLVRVPVCIIQSS------VDLSVPPA 230 (275)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~l~i~G~------~D~~~~~~ 230 (275)
.. .+... +.......++.+.+. .+..+ .-++.+|-|.|+ .|..||..
T Consensus 155 ~~----~~~~~--gp~~~~~~y~~l~~~--------------------~~~~~-p~~i~VLnI~G~~~~g~~sDG~V~~~ 207 (255)
T PF06028_consen 155 QN----DLNKN--GPKSMTPMYQDLLKN--------------------RRKNF-PKNIQVLNIYGDLEDGSNSDGIVPNA 207 (255)
T ss_dssp TT-----CSTT---BSS--HHHHHHHHT--------------------HGGGS-TTT-EEEEEEEESBTTCSBTSSSBHH
T ss_pred hh----hhccc--CCcccCHHHHHHHHH--------------------HHhhC-CCCeEEEEEecccCCCCCCCeEEeHH
Confidence 00 00000 000000011111111 01112 236889999998 78999998
Q ss_pred HHHHHHHHcCCC---ccEEEc--CCCCCCCCCCChHHHHHHHHHHHH
Q 045774 231 VAEYMRRHLGGP---TVLEFL--PTHGHLPHVSSPAPVANAIQQLLR 272 (275)
Q Consensus 231 ~~~~~~~~~~~~---~~~~~i--~~~gH~~~~e~p~~~~~~i~~fl~ 272 (275)
-+..+.-.+.+. .+..++ ++|.|.-..|+|+ |.+.|.+||-
T Consensus 208 Ss~sl~~L~~~~~~~Y~e~~v~G~~a~HS~LheN~~-V~~~I~~FLw 253 (255)
T PF06028_consen 208 SSLSLRYLLKNRAKSYQEKTVTGKDAQHSQLHENPQ-VDKLIIQFLW 253 (255)
T ss_dssp HHCTHHHHCTTTSSEEEEEEEESGGGSCCGGGCCHH-HHHHHHHHHC
T ss_pred HHHHHHHHhhcccCceEEEEEECCCCccccCCCCHH-HHHHHHHHhc
Confidence 888777766542 233344 3478998888884 6689999984
No 102
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.28 E-value=3e-10 Score=92.75 Aligned_cols=175 Identities=21% Similarity=0.205 Sum_probs=121.9
Q ss_pred hhhhceEEecCCC-ceEEEEcCCCCChhhhhhhHHHhhc-CCEEEEEccCCC-CCCCCCCCCc---cc----ccchhHHH
Q 045774 12 LEALNVRVVGQGQ-SIIVFSHGFGSDQSVWSRVIPSFTR-AYRVISFDLMCS-GSCDPTNYDF---QR----YATLDGYV 81 (275)
Q Consensus 12 ~~~~~~~~~g~g~-~~ivllHG~~~~~~~w~~~~~~l~~-~~~via~Dl~G~-G~S~~~~~~~---~~----~~~~~~~a 81 (275)
+..+.++-.+.+. |.||++|++.+-....+.+.+.|+. +|-|+++|+-+. |.+....... .. -.+.....
T Consensus 14 ~~~~~a~P~~~~~~P~VIv~hei~Gl~~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (236)
T COG0412 14 LPAYLARPAGAGGFPGVIVLHEIFGLNPHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVL 93 (236)
T ss_pred EeEEEecCCcCCCCCEEEEEecccCCchHHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHH
Confidence 4445555556554 7899999998888899999999986 799999999973 4432211000 00 01235677
Q ss_pred HHHHHHHHHhC------CCceEEEEeChhHHHHHHHHHhCCccccceeeecCCCCCcCCCCCcCCCCcchHHHHHHHHhh
Q 045774 82 DDLLSFLDALE------IDRCAFVGHSVSAMIGLLAAIHRPNLFSRLILIGGSPRFTNDGNYIGGIDPAHMEEVFRRMES 155 (275)
Q Consensus 82 ~dl~~~l~~l~------~~~~~lvGhS~GG~val~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (275)
.|+.+.++.|. .+++.++|.||||.+++.++.+.| +|++.|..-+.....
T Consensus 94 ~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~~~----------------------- 149 (236)
T COG0412 94 ADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLIAD----------------------- 149 (236)
T ss_pred HHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCCCC-----------------------
Confidence 77777777663 356999999999999999998877 777777643211000
Q ss_pred hhhhhhhhhcccccCCCCChHHHHHHHHHhhcCChHHHHHHHHHHhhhchHhhhCCCCCcEEEEEeCCCCCCCHHHHHHH
Q 045774 156 NYESWVAGFVPMALGADVPDMALQEFSRTLFSMRPDIALHVARTAFAADLRHVLGLVRVPVCIIQSSVDLSVPPAVAEYM 235 (275)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~ 235 (275)
......++++|++++.|+.|..+|....+.+
T Consensus 150 -------------------------------------------------~~~~~~~~~~pvl~~~~~~D~~~p~~~~~~~ 180 (236)
T COG0412 150 -------------------------------------------------DTADAPKIKVPVLLHLAGEDPYIPAADVDAL 180 (236)
T ss_pred -------------------------------------------------cccccccccCcEEEEecccCCCCChhHHHHH
Confidence 0000336789999999999999998877766
Q ss_pred HHHcCCC---ccEEEcCCCCCCCCCCC
Q 045774 236 RRHLGGP---TVLEFLPTHGHLPHVSS 259 (275)
Q Consensus 236 ~~~~~~~---~~~~~i~~~gH~~~~e~ 259 (275)
.+.+... .++++++++.|..+.+.
T Consensus 181 ~~~~~~~~~~~~~~~y~ga~H~F~~~~ 207 (236)
T COG0412 181 AAALEDAGVKVDLEIYPGAGHGFANDR 207 (236)
T ss_pred HHHHHhcCCCeeEEEeCCCccccccCC
Confidence 6654332 46888999989888653
No 103
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=99.23 E-value=1e-10 Score=94.85 Aligned_cols=97 Identities=16% Similarity=0.202 Sum_probs=66.6
Q ss_pred ceEEEEcCCCCChhhhhhhHHHhhc---------CCEEEEEccCCCCCCCCCCCCcccccchhHHHH----HHHHHHHHh
Q 045774 25 SIIVFSHGFGSDQSVWSRVIPSFTR---------AYRVISFDLMCSGSCDPTNYDFQRYATLDGYVD----DLLSFLDAL 91 (275)
Q Consensus 25 ~~ivllHG~~~~~~~w~~~~~~l~~---------~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~----dl~~~l~~l 91 (275)
.+||||||++++...|+.+...+.+ .++++++|+......-. ..++.+.++ .+..+++..
T Consensus 5 ~pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~-------g~~l~~q~~~~~~~i~~i~~~~ 77 (225)
T PF07819_consen 5 IPVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFH-------GRTLQRQAEFLAEAIKYILELY 77 (225)
T ss_pred CEEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCccccccc-------cccHHHHHHHHHHHHHHHHHhh
Confidence 4799999999999888887765521 37899999876642210 012333333 334444444
Q ss_pred -----CCCceEEEEeChhHHHHHHHHHhCC---ccccceeeecCC
Q 045774 92 -----EIDRCAFVGHSVSAMIGLLAAIHRP---NLFSRLILIGGS 128 (275)
Q Consensus 92 -----~~~~~~lvGhS~GG~val~~a~~~p---~~v~~lvli~~~ 128 (275)
+.++++||||||||.+|..+....+ +.|+.+|.++++
T Consensus 78 ~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tP 122 (225)
T PF07819_consen 78 KSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTP 122 (225)
T ss_pred hhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCC
Confidence 4568999999999999887765543 479999998753
No 104
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.22 E-value=3.2e-10 Score=93.99 Aligned_cols=227 Identities=18% Similarity=0.239 Sum_probs=84.2
Q ss_pred ceEEEEcCCCCChh---hhhhhHHHhhc-CCEEEEEccCC----CCCCCCCCCCcccccchhHHHHHHHHHHHHh-----
Q 045774 25 SIIVFSHGFGSDQS---VWSRVIPSFTR-AYRVISFDLMC----SGSCDPTNYDFQRYATLDGYVDDLLSFLDAL----- 91 (275)
Q Consensus 25 ~~ivllHG~~~~~~---~w~~~~~~l~~-~~~via~Dl~G----~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l----- 91 (275)
..||||.|++.... ....+.+.|.+ +|.|+-+-++. +|- .+++.-++|+.++++.|
T Consensus 34 ~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~-----------~SL~~D~~eI~~~v~ylr~~~~ 102 (303)
T PF08538_consen 34 NALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGT-----------SSLDRDVEEIAQLVEYLRSEKG 102 (303)
T ss_dssp SEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S-------------HHHHHHHHHHHHHHHHHHS-
T ss_pred cEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCc-----------chhhhHHHHHHHHHHHHHHhhc
Confidence 47999999987543 34556677865 79999998873 332 36888888888888755
Q ss_pred ---CCCceEEEEeChhHHHHHHHHHhCC-----ccccceeeecCCCCCcCCCCCcCCC-Cc-chHHHHHHHHhhhh----
Q 045774 92 ---EIDRCAFVGHSVSAMIGLLAAIHRP-----NLFSRLILIGGSPRFTNDGNYIGGI-DP-AHMEEVFRRMESNY---- 157 (275)
Q Consensus 92 ---~~~~~~lvGhS~GG~val~~a~~~p-----~~v~~lvli~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~---- 157 (275)
+.++++|+|||.|.=-++++..... ..|+++||-++.... ...... .. ...++.........
T Consensus 103 g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDR----Ea~~~~~~~~~~~~~~v~~A~~~i~~g~ 178 (303)
T PF08538_consen 103 GHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDR----EAILNFLGEREAYEELVALAKELIAEGK 178 (303)
T ss_dssp -----S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---T----TSTTTSHHH---HHHHHHHHHHHHHCT-
T ss_pred cccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCCh----hHhhhcccchHHHHHHHHHHHHHHHcCC
Confidence 2457999999999999998876653 579999998764321 111111 00 12222222211110
Q ss_pred -hhhhh-hhcccccCCCCChHHHHHHHHHhhc-CChHHH-HHHHHHHhhhchHhhhCCCCCcEEEEEeCCCCCCCHHHH-
Q 045774 158 -ESWVA-GFVPMALGADVPDMALQEFSRTLFS-MRPDIA-LHVARTAFAADLRHVLGLVRVPVCIIQSSVDLSVPPAVA- 232 (275)
Q Consensus 158 -~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~d~~~~l~~i~~P~l~i~G~~D~~~~~~~~- 232 (275)
..... .+...... +.+ + -++++.+ ..+... ..+...+....++..+..+++|+|++.+.+|..+|...-
T Consensus 179 ~~~~lp~~~~~~~~~-~~P---i--TA~Rf~SL~s~~gdDD~FSSDL~de~l~~tfG~v~~plLvl~Sg~DEyvP~~vdk 252 (303)
T PF08538_consen 179 GDEILPREFTPLVFY-DTP---I--TAYRFLSLASPGGDDDYFSSDLSDERLKKTFGKVSKPLLVLYSGKDEYVPPWVDK 252 (303)
T ss_dssp TT-GG----GGTTT--SS--------HHHHHT-S-SSHHHHTHHHHHTT-HHHHTGGG--S-EEEEEE--TT--------
T ss_pred CCceeeccccccccC-CCc---c--cHHHHHhccCCCCcccccCCCCCHHHHHHHhccCCCceEEEecCCCceecccccc
Confidence 00000 01111110 000 0 1112211 111110 111122333446667889999999999999999998653
Q ss_pred HHHHHHcCCCc-------cEEEcCCCCCCCCCCChH----HHHHHHHHHHH
Q 045774 233 EYMRRHLGGPT-------VLEFLPTHGHLPHVSSPA----PVANAIQQLLR 272 (275)
Q Consensus 233 ~~~~~~~~~~~-------~~~~i~~~gH~~~~e~p~----~~~~~i~~fl~ 272 (275)
+.+.+++.... .-.+||+|.|.+--+..+ .+.+.+..||+
T Consensus 253 ~~Ll~rw~~a~~~~~~s~~S~iI~GA~H~~~~~~~~~~~~~l~~rV~~fl~ 303 (303)
T PF08538_consen 253 EALLERWKAATNPKIWSPLSGIIPGASHNVSGPSQAEAREWLVERVVKFLK 303 (303)
T ss_dssp ---------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccCC
Confidence 23333332211 134789999987654443 36666677663
No 105
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=99.20 E-value=9.6e-10 Score=93.86 Aligned_cols=227 Identities=16% Similarity=0.191 Sum_probs=127.6
Q ss_pred CCceEEEEcCCCCChhhhhh-----hHHHh-hcCCEEEEEccCCCCCCCCCCCCcccccchhHHH-----HHHHHHHHHh
Q 045774 23 GQSIIVFSHGFGSDQSVWSR-----VIPSF-TRAYRVISFDLMCSGSCDPTNYDFQRYATLDGYV-----DDLLSFLDAL 91 (275)
Q Consensus 23 g~~~ivllHG~~~~~~~w~~-----~~~~l-~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a-----~dl~~~l~~l 91 (275)
.+.|+|+||-+.....+|+. ++.-| .+++.|..+|+++-..+... .+++++. +.+..+.+..
T Consensus 106 ~~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~~-------~~~edYi~e~l~~aid~v~~it 178 (445)
T COG3243 106 LKRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLAA-------KNLEDYILEGLSEAIDTVKDIT 178 (445)
T ss_pred CCCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhhh-------ccHHHHHHHHHHHHHHHHHHHh
Confidence 34589999999888887754 44544 45799999999977665321 1355555 4455566677
Q ss_pred CCCceEEEEeChhHHHHHHHHHhCCcc-ccceeeecCCCCCcCCCCCcCCCCcc-hHHH------------------HHH
Q 045774 92 EIDRCAFVGHSVSAMIGLLAAIHRPNL-FSRLILIGGSPRFTNDGNYIGGIDPA-HMEE------------------VFR 151 (275)
Q Consensus 92 ~~~~~~lvGhS~GG~val~~a~~~p~~-v~~lvli~~~~~~~~~~~~~~~~~~~-~~~~------------------~~~ 151 (275)
+.+++.++|++.||+++..+++.+|.+ |++++++.+.-.+.... ....+... .++. .|.
T Consensus 179 g~~~InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~~~g-~l~if~n~~~~~~~~~~i~~~g~lpg~~ma~~F~ 257 (445)
T COG3243 179 GQKDINLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFSHAG-DLGIFANEATIEALDADIVQKGILPGWYMAIVFF 257 (445)
T ss_pred CccccceeeEecchHHHHHHHHhhhhcccccceeeecchhhcccc-ccccccCHHHHHHHHhhhhhccCCChHHHHHHHH
Confidence 889999999999999999888888887 99999987543332110 01111110 1111 111
Q ss_pred HHhhhhhhhhhhhcccccCCCCChHHHHHHHHHhh--cCChHHHHHHHHHHhhhc-----------hHhhhCCCCCcEEE
Q 045774 152 RMESNYESWVAGFVPMALGADVPDMALQEFSRTLF--SMRPDIALHVARTAFAAD-----------LRHVLGLVRVPVCI 218 (275)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~d-----------~~~~l~~i~~P~l~ 218 (275)
+++.+.--|. -|.........+.. .+...-... .........+++.+...+ ..=.+.+|+||++.
T Consensus 258 mLrpndliw~-~fV~nyl~ge~pl~-fdllyWn~dst~~~~~~~~~~Lrn~y~~N~l~~g~~~v~G~~VdL~~It~pvy~ 335 (445)
T COG3243 258 LLRPNDLIWN-YFVNNYLDGEQPLP-FDLLYWNADSTRLPGAAHSEYLRNFYLENRLIRGGLEVSGTMVDLGDITCPVYN 335 (445)
T ss_pred hcCccccchH-HHHHHhcCCCCCCc-hhHHHhhCCCccCchHHHHHHHHHHHHhChhhccceEECCEEechhhcccceEE
Confidence 1111100010 00000000000000 000000000 011111122222221111 11236789999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHcCCCccEEEcCCCCCCCCCCCh
Q 045774 219 IQSSVDLSVPPAVAEYMRRHLGGPTVLEFLPTHGHLPHVSSP 260 (275)
Q Consensus 219 i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p 260 (275)
+.+++|.+.|++.....++.+++..+++ .-++||...+-+|
T Consensus 336 ~a~~~DhI~P~~Sv~~g~~l~~g~~~f~-l~~sGHIa~vVN~ 376 (445)
T COG3243 336 LAAEEDHIAPWSSVYLGARLLGGEVTFV-LSRSGHIAGVVNP 376 (445)
T ss_pred EeecccccCCHHHHHHHHHhcCCceEEE-EecCceEEEEeCC
Confidence 9999999999998888888888744444 4569998766654
No 106
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=99.16 E-value=3e-09 Score=80.44 Aligned_cols=172 Identities=19% Similarity=0.200 Sum_probs=114.6
Q ss_pred ceEEEEcCCCCC-hhhhhhhHHHhhcCCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhCCCceEEEEeCh
Q 045774 25 SIIVFSHGFGSD-QSVWSRVIPSFTRAYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALEIDRCAFVGHSV 103 (275)
Q Consensus 25 ~~ivllHG~~~~-~~~w~~~~~~l~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~ 103 (275)
..+|.|||+..| ..+|+...+.-... +-.+++. + .... .+++|++.+.+.+... -++++||+||+
T Consensus 3 ~~~lIVpG~~~Sg~~HWq~~we~~l~~--a~rveq~-----~-----w~~P-~~~dWi~~l~~~v~a~-~~~~vlVAHSL 68 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQSRWESALPN--ARRVEQD-----D-----WEAP-VLDDWIARLEKEVNAA-EGPVVLVAHSL 68 (181)
T ss_pred ceEEEecCCCCCChhHHHHHHHhhCcc--chhcccC-----C-----CCCC-CHHHHHHHHHHHHhcc-CCCeEEEEecc
Confidence 358999998554 68898766532222 1112111 1 1122 5899999999988877 45699999999
Q ss_pred hHHHHHHHHHhCCccccceeeecCCCCCcCCCCCcCCCCcchHHHHHHHHhhhhhhhhhhhcccccCCCCChHHHHHHHH
Q 045774 104 SAMIGLLAAIHRPNLFSRLILIGGSPRFTNDGNYIGGIDPAHMEEVFRRMESNYESWVAGFVPMALGADVPDMALQEFSR 183 (275)
Q Consensus 104 GG~val~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (275)
|+..++.++.+....|++++++++.-. .... . ...
T Consensus 69 Gc~~v~h~~~~~~~~V~GalLVAppd~-~~~~-----~---------------~~~------------------------ 103 (181)
T COG3545 69 GCATVAHWAEHIQRQVAGALLVAPPDV-SRPE-----I---------------RPK------------------------ 103 (181)
T ss_pred cHHHHHHHHHhhhhccceEEEecCCCc-cccc-----c---------------chh------------------------
Confidence 999999999887779999999975321 0000 0 000
Q ss_pred HhhcCChHHHHHHHHHHhhhchHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHHcCCCccEEEcCCCCCCC---CCCCh
Q 045774 184 TLFSMRPDIALHVARTAFAADLRHVLGLVRVPVCIIQSSVDLSVPPAVAEYMRRHLGGPTVLEFLPTHGHLP---HVSSP 260 (275)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~---~~e~p 260 (275)
.+....+ .. .....-|.+++.+++|+.++.+.++.+++.+++ .++.+.++||+- -+...
T Consensus 104 ~~~tf~~-------------~p---~~~lpfps~vvaSrnDp~~~~~~a~~~a~~wgs--~lv~~g~~GHiN~~sG~g~w 165 (181)
T COG3545 104 HLMTFDP-------------IP---REPLPFPSVVVASRNDPYVSYEHAEDLANAWGS--ALVDVGEGGHINAESGFGPW 165 (181)
T ss_pred hccccCC-------------Cc---cccCCCceeEEEecCCCCCCHHHHHHHHHhccH--hheecccccccchhhcCCCc
Confidence 0000000 00 113457899999999999999999999999985 577778899973 34455
Q ss_pred HHHHHHHHHHHHh
Q 045774 261 APVANAIQQLLRR 273 (275)
Q Consensus 261 ~~~~~~i~~fl~~ 273 (275)
.+....+.+++.+
T Consensus 166 peg~~~l~~~~s~ 178 (181)
T COG3545 166 PEGYALLAQLLSR 178 (181)
T ss_pred HHHHHHHHHHhhh
Confidence 6666777777654
No 107
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=99.15 E-value=3.4e-09 Score=94.84 Aligned_cols=103 Identities=18% Similarity=0.164 Sum_probs=69.6
Q ss_pred CceEEEEcCCCCChhhhhhhHH------------------HhhcCCEEEEEccC-CCCCCCCCCCCcccccchhHHHHHH
Q 045774 24 QSIIVFSHGFGSDQSVWSRVIP------------------SFTRAYRVISFDLM-CSGSCDPTNYDFQRYATLDGYVDDL 84 (275)
Q Consensus 24 ~~~ivllHG~~~~~~~w~~~~~------------------~l~~~~~via~Dl~-G~G~S~~~~~~~~~~~~~~~~a~dl 84 (275)
.|.||+++|-++.+.++..+.+ .+.+..+++.+|+| |+|.|.....+ ...+.++.++|+
T Consensus 77 ~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~~~~l~iDqP~G~G~S~~~~~~--~~~~~~~~a~d~ 154 (462)
T PTZ00472 77 APVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNNEAYVIYVDQPAGVGFSYADKAD--YDHNESEVSEDM 154 (462)
T ss_pred CCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCcccccccCeEEEeCCCCcCcccCCCCC--CCCChHHHHHHH
Confidence 4789999997666655533221 12234689999986 99988532111 123568899999
Q ss_pred HHHHHH-------hCCCceEEEEeChhHHHHHHHHHhC---C-------ccccceeeecCC
Q 045774 85 LSFLDA-------LEIDRCAFVGHSVSAMIGLLAAIHR---P-------NLFSRLILIGGS 128 (275)
Q Consensus 85 ~~~l~~-------l~~~~~~lvGhS~GG~val~~a~~~---p-------~~v~~lvli~~~ 128 (275)
.++++. ++..++.|+||||||..+-.+|.+- . =.++++++-++.
T Consensus 155 ~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~ 215 (462)
T PTZ00472 155 YNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGL 215 (462)
T ss_pred HHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEeccc
Confidence 998884 3457899999999999987766542 1 136777776653
No 108
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.13 E-value=2e-09 Score=84.71 Aligned_cols=233 Identities=19% Similarity=0.291 Sum_probs=128.1
Q ss_pred eEEEEcCCCCChhhhhhhHHHhhc-CCEEEEEccCCCCCCCCCCCCcccccchhHHH-HHHHHHHHHh----CCCceEEE
Q 045774 26 IIVFSHGFGSDQSVWSRVIPSFTR-AYRVISFDLMCSGSCDPTNYDFQRYATLDGYV-DDLLSFLDAL----EIDRCAFV 99 (275)
Q Consensus 26 ~ivllHG~~~~~~~w~~~~~~l~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a-~dl~~~l~~l----~~~~~~lv 99 (275)
.|+.-.+++.-...++.+...+++ +|.|..+|+||.|.|++.......+ ++.|++ .|+.+.++.+ .--+...|
T Consensus 32 ~~~va~a~Gv~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~-~~~DwA~~D~~aal~~~~~~~~~~P~y~v 110 (281)
T COG4757 32 RLVVAGATGVGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQW-RYLDWARLDFPAALAALKKALPGHPLYFV 110 (281)
T ss_pred cEEecccCCcchhHhHHHHHHhhccCceEEEEecccccCCCccccccCcc-chhhhhhcchHHHHHHHHhhCCCCceEEe
Confidence 455666677777888888887766 7999999999999997632222222 344444 3444444444 44578999
Q ss_pred EeChhHHHHHHHHHhCCccccceeeecCCCCCcCCCCCcCCCCcchHHHHHHHHhhhhhhhhhhhcc-cccC--CCCChH
Q 045774 100 GHSVSAMIGLLAAIHRPNLFSRLILIGGSPRFTNDGNYIGGIDPAHMEEVFRRMESNYESWVAGFVP-MALG--ADVPDM 176 (275)
Q Consensus 100 GhS~GG~val~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~ 176 (275)
|||+||-+.-.+. ++| ++.+....++.+.+.........+..- -+.. +......+.++..+ .+.+ .+.+..
T Consensus 111 gHS~GGqa~gL~~-~~~-k~~a~~vfG~gagwsg~m~~~~~l~~~---~l~~-lv~p~lt~w~g~~p~~l~G~G~d~p~~ 184 (281)
T COG4757 111 GHSFGGQALGLLG-QHP-KYAAFAVFGSGAGWSGWMGLRERLGAV---LLWN-LVGPPLTFWKGYMPKDLLGLGSDLPGT 184 (281)
T ss_pred eccccceeecccc-cCc-ccceeeEeccccccccchhhhhcccce---eecc-ccccchhhccccCcHhhcCCCccCcch
Confidence 9999998854443 455 555555555444332221111110000 0000 00001111111222 1111 123333
Q ss_pred HHHHHHHHhhcCChHHHHHHHHHHhhhchHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHHcCCCccEE--EcCC----
Q 045774 177 ALQEFSRTLFSMRPDIALHVARTAFAADLRHVLGLVRVPVCIIQSSVDLSVPPAVAEYMRRHLGGPTVLE--FLPT---- 250 (275)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~--~i~~---- 250 (275)
..+++.+.... ...... .-.....++....+++|++.+...+|..+|+...+.+.+.-++ +.++ .++.
T Consensus 185 v~RdW~RwcR~-p~y~fd----dp~~~~~~q~yaaVrtPi~~~~~~DD~w~P~As~d~f~~~y~n-Apl~~~~~~~~~~~ 258 (281)
T COG4757 185 VMRDWARWCRH-PRYYFD----DPAMRNYRQVYAAVRTPITFSRALDDPWAPPASRDAFASFYRN-APLEMRDLPRAEGP 258 (281)
T ss_pred HHHHHHHHhcC-cccccc----ChhHhHHHHHHHHhcCceeeeccCCCCcCCHHHHHHHHHhhhc-CcccceecCcccCc
Confidence 23444433211 100000 0001124556677899999999999999999988888876665 3343 3332
Q ss_pred CCCCCCCCCh-HHHHHHHHHHH
Q 045774 251 HGHLPHVSSP-APVANAIQQLL 271 (275)
Q Consensus 251 ~gH~~~~e~p-~~~~~~i~~fl 271 (275)
-||+-..-+| |.+-+.+.+++
T Consensus 259 lGH~gyfR~~~Ealwk~~L~w~ 280 (281)
T COG4757 259 LGHMGYFREPFEALWKEMLGWF 280 (281)
T ss_pred ccchhhhccchHHHHHHHHHhh
Confidence 5999888888 66666666554
No 109
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.12 E-value=7.4e-09 Score=97.86 Aligned_cols=208 Identities=12% Similarity=0.086 Sum_probs=109.8
Q ss_pred hcCCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhC--------------------CCceEEEEeChhHHH
Q 045774 48 TRAYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALE--------------------IDRCAFVGHSVSAMI 107 (275)
Q Consensus 48 ~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~--------------------~~~~~lvGhS~GG~v 107 (275)
..+|.|+.+|.||+|.|+... ..+ -..-.+|..++++-+. ..++.++|.||||.+
T Consensus 277 ~rGYaVV~~D~RGtg~SeG~~---~~~--~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G~~ 351 (767)
T PRK05371 277 PRGFAVVYVSGIGTRGSDGCP---TTG--DYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLGTL 351 (767)
T ss_pred hCCeEEEEEcCCCCCCCCCcC---ccC--CHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHHHH
Confidence 448999999999999996421 111 1445555555555443 468999999999999
Q ss_pred HHHHHHhCCccccceeeecCCCCCcC---CC---CCcCCCCcchHHHHHHHHhhhhhhhhhhhcccccCCCCChHHHHHH
Q 045774 108 GLLAAIHRPNLFSRLILIGGSPRFTN---DG---NYIGGIDPAHMEEVFRRMESNYESWVAGFVPMALGADVPDMALQEF 181 (275)
Q Consensus 108 al~~a~~~p~~v~~lvli~~~~~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (275)
++.+|...|+.++.+|.+++...+.. .. ....++.......+...... +. ...... .... ...+.+
T Consensus 352 ~~~aAa~~pp~LkAIVp~a~is~~yd~yr~~G~~~~~~g~~ged~d~l~~~~~~--r~----~~~~~~-~~~~-~~~~~~ 423 (767)
T PRK05371 352 PNAVATTGVEGLETIIPEAAISSWYDYYRENGLVRAPGGYQGEDLDVLAELTYS--RN----LLAGDY-LRHN-EACEKL 423 (767)
T ss_pred HHHHHhhCCCcceEEEeeCCCCcHHHHhhcCCceeccCCcCCcchhhHHHHhhh--cc----cCcchh-hcch-HHHHHH
Confidence 99999999999999998765432211 00 00111111111111000000 00 000000 0000 001111
Q ss_pred HHHhh----cCChHHHHHHHHHHhhhchHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHHcC---CCccEEEcCCCCCC
Q 045774 182 SRTLF----SMRPDIALHVARTAFAADLRHVLGLVRVPVCIIQSSVDLSVPPAVAEYMRRHLG---GPTVLEFLPTHGHL 254 (275)
Q Consensus 182 ~~~~~----~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~---~~~~~~~i~~~gH~ 254 (275)
...+. ...++.. ......+....+.+|++|+++|+|..|..+++.....+.+.+. ...++.+ ...+|.
T Consensus 424 ~~~~~~~~~~~~~~y~----~fW~~rn~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~l-~~g~H~ 498 (767)
T PRK05371 424 LAELTAAQDRKTGDYN----DFWDDRNYLKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLFL-HQGGHV 498 (767)
T ss_pred HhhhhhhhhhcCCCcc----HHHHhCCHhhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEEE-eCCCcc
Confidence 00000 0000000 0001123344567899999999999999998765544444442 2235544 457896
Q ss_pred CC-CCChHHHHHHHHHHHHh
Q 045774 255 PH-VSSPAPVANAIQQLLRR 273 (275)
Q Consensus 255 ~~-~e~p~~~~~~i~~fl~~ 273 (275)
.. ...+.++.+.+.+|+++
T Consensus 499 ~~~~~~~~d~~e~~~~Wfd~ 518 (767)
T PRK05371 499 YPNNWQSIDFRDTMNAWFTH 518 (767)
T ss_pred CCCchhHHHHHHHHHHHHHh
Confidence 43 33456677777778765
No 110
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.12 E-value=7.5e-10 Score=90.60 Aligned_cols=100 Identities=13% Similarity=0.205 Sum_probs=85.4
Q ss_pred ceEEEEcCCCCChhhhhhhHHHhhcCCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhCC-CceEEEEeCh
Q 045774 25 SIIVFSHGFGSDQSVWSRVIPSFTRAYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALEI-DRCAFVGHSV 103 (275)
Q Consensus 25 ~~ivllHG~~~~~~~w~~~~~~l~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~-~~~~lvGhS~ 103 (275)
++++++|+.++....|..+...|.+...|++++-||.|.-.. ...+++++++...+.+.+... .+++|+|||+
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~~~~v~~l~a~g~~~~~~------~~~~l~~~a~~yv~~Ir~~QP~GPy~L~G~S~ 74 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGPLLPVYGLQAPGYGAGEQ------PFASLDDMAAAYVAAIRRVQPEGPYVLLGWSL 74 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhccCceeeccccCccccccc------ccCCHHHHHHHHHHHHHHhCCCCCEEEEeecc
Confidence 479999999999999999999999999999999999985321 124799999999998888764 5899999999
Q ss_pred hHHHHHHHHHh---CCccccceeeecCCCC
Q 045774 104 SAMIGLLAAIH---RPNLFSRLILIGGSPR 130 (275)
Q Consensus 104 GG~val~~a~~---~p~~v~~lvli~~~~~ 130 (275)
||.||.++|.+ .-+.|+.|+++|+.+.
T Consensus 75 GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 75 GGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred ccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 99999998865 3457999999998664
No 111
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=99.08 E-value=3.6e-10 Score=99.75 Aligned_cols=92 Identities=13% Similarity=0.090 Sum_probs=69.3
Q ss_pred CChhhhhhhHHHhhcCCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhCCCceEEEEeChhHHHHHHHHHh
Q 045774 35 SDQSVWSRVIPSFTRAYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALEIDRCAFVGHSVSAMIGLLAAIH 114 (275)
Q Consensus 35 ~~~~~w~~~~~~l~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~GG~val~~a~~ 114 (275)
.....|..+++.|.+...+...|++|+|.+.+.. ... ...++++.+.+.++.++.+.++++||||||||.+++.++..
T Consensus 105 ~~~~~~~~li~~L~~~GY~~~~dL~g~gYDwR~~-~~~-~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~ 182 (440)
T PLN02733 105 DEVYYFHDMIEQLIKWGYKEGKTLFGFGYDFRQS-NRL-PETMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMSL 182 (440)
T ss_pred chHHHHHHHHHHHHHcCCccCCCcccCCCCcccc-ccH-HHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHH
Confidence 4568999999999986566699999999875321 100 11245555555556666678899999999999999999999
Q ss_pred CCcc----ccceeeecCC
Q 045774 115 RPNL----FSRLILIGGS 128 (275)
Q Consensus 115 ~p~~----v~~lvli~~~ 128 (275)
+|+. |+++|.++++
T Consensus 183 ~p~~~~k~I~~~I~la~P 200 (440)
T PLN02733 183 HSDVFEKYVNSWIAIAAP 200 (440)
T ss_pred CCHhHHhHhccEEEECCC
Confidence 9975 6888888753
No 112
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=99.01 E-value=5.9e-08 Score=81.88 Aligned_cols=237 Identities=15% Similarity=0.201 Sum_probs=130.3
Q ss_pred CceEEEEcCCCCChhhhhh-h-H-HHhhcCCEEEEEccCCCCCCCCCCCCcccccchhHHH----------HHHHHHHHH
Q 045774 24 QSIIVFSHGFGSDQSVWSR-V-I-PSFTRAYRVISFDLMCSGSCDPTNYDFQRYATLDGYV----------DDLLSFLDA 90 (275)
Q Consensus 24 ~~~ivllHG~~~~~~~w~~-~-~-~~l~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a----------~dl~~~l~~ 90 (275)
+|.+|.+.|-|....+.+. + . +.+.++...+.+..|=||.-.|..+......+..|+- .-|..+++.
T Consensus 92 rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~Wl~~ 171 (348)
T PF09752_consen 92 RPVCIHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLHWLER 171 (348)
T ss_pred CceEEEecCCCccchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHHHHHh
Confidence 4678888898885554443 2 2 4566689999999999998766433222233333332 234455666
Q ss_pred hCCCceEEEEeChhHHHHHHHHHhCCccccceeeecCCC---CCcCCCCCcCCCCcchHHHHHHHHh-hhhhhhhhhhcc
Q 045774 91 LEIDRCAFVGHSVSAMIGLLAAIHRPNLFSRLILIGGSP---RFTNDGNYIGGIDPAHMEEVFRRME-SNYESWVAGFVP 166 (275)
Q Consensus 91 l~~~~~~lvGhS~GG~val~~a~~~p~~v~~lvli~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 166 (275)
.|..++.+.|-||||..|...|...|..|..+-.++... .+... .......+..+. ..+. ..+.........
T Consensus 172 ~G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs~vFt~G-vls~~i~W~~L~---~q~~~~~~~~~~~~~~~ 247 (348)
T PF09752_consen 172 EGYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSASVVFTEG-VLSNSINWDALE---KQFEDTVYEEEISDIPA 247 (348)
T ss_pred cCCCceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCCcchhhh-hhhcCCCHHHHH---HHhcccchhhhhccccc
Confidence 688899999999999999999999998877665555321 11111 011111112111 1100 000100000000
Q ss_pred cccCCCCChHHHHHHHHHhhcCChHHHHHHHH-HHhhhchHhh-hCCCCCcEEEEEeCCCCCCCHHHHHHHHHHcCCCcc
Q 045774 167 MALGADVPDMALQEFSRTLFSMRPDIALHVAR-TAFAADLRHV-LGLVRVPVCIIQSSVDLSVPPAVAEYMRRHLGGPTV 244 (275)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~-l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~ 244 (275)
...+.. .....+ .....+....... .....+...- .+.-.-.+.++.+++|..+|......+++..|+ ++
T Consensus 248 ----~~~~~~-~~~~~~--~~~~~Ea~~~m~~~md~~T~l~nf~~P~dp~~ii~V~A~~DaYVPr~~v~~Lq~~WPG-sE 319 (348)
T PF09752_consen 248 ----QNKSLP-LDSMEE--RRRDREALRFMRGVMDSFTHLTNFPVPVDPSAIIFVAAKNDAYVPRHGVLSLQEIWPG-SE 319 (348)
T ss_pred ----Cccccc-chhhcc--ccchHHHHHHHHHHHHhhccccccCCCCCCCcEEEEEecCceEechhhcchHHHhCCC-Ce
Confidence 000000 000000 0000111111000 0011111111 122234478899999999999877799999998 68
Q ss_pred EEEcCCCCCC-CCCCChHHHHHHHHHHHHh
Q 045774 245 LEFLPTHGHL-PHVSSPAPVANAIQQLLRR 273 (275)
Q Consensus 245 ~~~i~~~gH~-~~~e~p~~~~~~i~~fl~~ 273 (275)
+..++ +||. ..+-+.+.|.+.|.+-+++
T Consensus 320 vR~l~-gGHVsA~L~~q~~fR~AI~Daf~R 348 (348)
T PF09752_consen 320 VRYLP-GGHVSAYLLHQEAFRQAIYDAFER 348 (348)
T ss_pred EEEec-CCcEEEeeechHHHHHHHHHHhhC
Confidence 99887 5998 5667778899999887754
No 113
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.01 E-value=2.1e-08 Score=76.81 Aligned_cols=170 Identities=19% Similarity=0.300 Sum_probs=105.9
Q ss_pred CceEEEEcCCCCCh-hhhhh----hHHHhhc-CCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhCCC--c
Q 045774 24 QSIIVFSHGFGSDQ-SVWSR----VIPSFTR-AYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALEID--R 95 (275)
Q Consensus 24 ~~~ivllHG~~~~~-~~w~~----~~~~l~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~~--~ 95 (275)
.|..|.+|--+--. .+-.+ +...|.+ +|.++.+|+||.|+|... +|..... . +-+..+.+++++...+ .
T Consensus 28 ~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~-fD~GiGE-~-~Da~aaldW~~~~hp~s~~ 104 (210)
T COG2945 28 APIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGE-FDNGIGE-L-EDAAAALDWLQARHPDSAS 104 (210)
T ss_pred CceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCc-ccCCcch-H-HHHHHHHHHHHhhCCCchh
Confidence 35677888633222 12222 3344544 799999999999999632 1211111 2 2344455555555443 2
Q ss_pred eEEEEeChhHHHHHHHHHhCCccccceeeecCCCCCcCCCCCcCCCCcchHHHHHHHHhhhhhhhhhhhcccccCCCCCh
Q 045774 96 CAFVGHSVSAMIGLLAAIHRPNLFSRLILIGGSPRFTNDGNYIGGIDPAHMEEVFRRMESNYESWVAGFVPMALGADVPD 175 (275)
Q Consensus 96 ~~lvGhS~GG~val~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (275)
+.|.|.|.||.|++.+|.+.|+- .++|+..|... .+
T Consensus 105 ~~l~GfSFGa~Ia~~la~r~~e~---~~~is~~p~~~--------------------------~~--------------- 140 (210)
T COG2945 105 CWLAGFSFGAYIAMQLAMRRPEI---LVFISILPPIN--------------------------AY--------------- 140 (210)
T ss_pred hhhcccchHHHHHHHHHHhcccc---cceeeccCCCC--------------------------ch---------------
Confidence 46899999999999999988762 22222111000 00
Q ss_pred HHHHHHHHHhhcCChHHHHHHHHHHhhhchHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHHcCCCccEEEcCCCCCCC
Q 045774 176 MALQEFSRTLFSMRPDIALHVARTAFAADLRHVLGLVRVPVCIIQSSVDLSVPPAVAEYMRRHLGGPTVLEFLPTHGHLP 255 (275)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~ 255 (275)
.+ ..+....+|.++|+|+.|.+++....-..++..+ -++++++++.|+.
T Consensus 141 --------df---------------------s~l~P~P~~~lvi~g~~Ddvv~l~~~l~~~~~~~--~~~i~i~~a~HFF 189 (210)
T COG2945 141 --------DF---------------------SFLAPCPSPGLVIQGDADDVVDLVAVLKWQESIK--ITVITIPGADHFF 189 (210)
T ss_pred --------hh---------------------hhccCCCCCceeEecChhhhhcHHHHHHhhcCCC--CceEEecCCCcee
Confidence 00 0022346899999999999998876655555544 3678889999975
Q ss_pred CCCChHHHHHHHHHHHH
Q 045774 256 HVSSPAPVANAIQQLLR 272 (275)
Q Consensus 256 ~~e~p~~~~~~i~~fl~ 272 (275)
+ .+-+.+.+.|.+||.
T Consensus 190 ~-gKl~~l~~~i~~~l~ 205 (210)
T COG2945 190 H-GKLIELRDTIADFLE 205 (210)
T ss_pred c-ccHHHHHHHHHHHhh
Confidence 5 566788899999984
No 114
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.01 E-value=7e-09 Score=86.88 Aligned_cols=103 Identities=17% Similarity=0.219 Sum_probs=66.5
Q ss_pred ceEEEEcCCCCCh-hhhhhh--HH--------HhhcCCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHH---H
Q 045774 25 SIIVFSHGFGSDQ-SVWSRV--IP--------SFTRAYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLD---A 90 (275)
Q Consensus 25 ~~ivllHG~~~~~-~~w~~~--~~--------~l~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~---~ 90 (275)
|+||..|+++.+. ..+... .. ....+|-|+..|.||+|.|+-.. +. ....-++|..++++ +
T Consensus 21 P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~-~~----~~~~e~~D~~d~I~W~~~ 95 (272)
T PF02129_consen 21 PVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEF-DP----MSPNEAQDGYDTIEWIAA 95 (272)
T ss_dssp EEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B--T----TSHHHHHHHHHHHHHHHH
T ss_pred cEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCcc-cc----CChhHHHHHHHHHHHHHh
Confidence 5788888988653 222221 11 33458999999999999996421 11 03445555555444 4
Q ss_pred hCC--CceEEEEeChhHHHHHHHHHhCCccccceeeecCCCCCc
Q 045774 91 LEI--DRCAFVGHSVSAMIGLLAAIHRPNLFSRLILIGGSPRFT 132 (275)
Q Consensus 91 l~~--~~~~lvGhS~GG~val~~a~~~p~~v~~lvli~~~~~~~ 132 (275)
... .+|-++|.|++|+.++.+|...|..+|+++...+.....
T Consensus 96 Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~~ 139 (272)
T PF02129_consen 96 QPWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDLY 139 (272)
T ss_dssp CTTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBTC
T ss_pred CCCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCccc
Confidence 433 379999999999999999998999999999886654433
No 115
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=99.00 E-value=5.2e-09 Score=84.30 Aligned_cols=168 Identities=18% Similarity=0.249 Sum_probs=85.4
Q ss_pred CceEEEEcCCCCChhhhhhhHHH----hhc-CCEEEEEccC-----CCCCC-------------CC--CCCC----cccc
Q 045774 24 QSIIVFSHGFGSDQSVWSRVIPS----FTR-AYRVISFDLM-----CSGSC-------------DP--TNYD----FQRY 74 (275)
Q Consensus 24 ~~~ivllHG~~~~~~~w~~~~~~----l~~-~~~via~Dl~-----G~G~S-------------~~--~~~~----~~~~ 74 (275)
++-||+|||++.|+..++.+... |.+ .++.+.+|=| +-|.. .+ ...+ ...+
T Consensus 4 k~riLcLHG~~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~ 83 (212)
T PF03959_consen 4 KPRILCLHGYGQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDHEY 83 (212)
T ss_dssp --EEEEE--TT--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SGGG
T ss_pred CceEEEeCCCCcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCcccc
Confidence 35699999999999999877654 455 6888877754 11111 00 0000 1123
Q ss_pred cchhHHHHHHHHHHHHhCCCceEEEEeChhHHHHHHHHHhCC--------ccccceeeecCCCCCcCCCCCcCCCCcchH
Q 045774 75 ATLDGYVDDLLSFLDALEIDRCAFVGHSVSAMIGLLAAIHRP--------NLFSRLILIGGSPRFTNDGNYIGGIDPAHM 146 (275)
Q Consensus 75 ~~~~~~a~dl~~~l~~l~~~~~~lvGhS~GG~val~~a~~~p--------~~v~~lvli~~~~~~~~~~~~~~~~~~~~~ 146 (275)
..+++-.+.+.+.+++.|. =.-|+|.|-||.+|..++.... ..+|-+|++++.......
T Consensus 84 ~~~~~sl~~l~~~i~~~GP-fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~------------ 150 (212)
T PF03959_consen 84 EGLDESLDYLRDYIEENGP-FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPD------------ 150 (212)
T ss_dssp ---HHHHHHHHHHHHHH----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE-------------
T ss_pred cCHHHHHHHHHHHHHhcCC-eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchh------------
Confidence 4466666677777776543 3579999999999987765321 235555665442210000
Q ss_pred HHHHHHHhhhhhhhhhhhcccccCCCCChHHHHHHHHHhhcCChHHHHHHHHHHhhhchHhhhCCCCCcEEEEEeCCCCC
Q 045774 147 EEVFRRMESNYESWVAGFVPMALGADVPDMALQEFSRTLFSMRPDIALHVARTAFAADLRHVLGLVRVPVCIIQSSVDLS 226 (275)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~l~i~G~~D~~ 226 (275)
. .... .-..|++|+|-|+|++|.+
T Consensus 151 ---------------------------------------~---------------~~~~--~~~~i~iPtlHv~G~~D~~ 174 (212)
T PF03959_consen 151 ---------------------------------------Y---------------QELY--DEPKISIPTLHVIGENDPV 174 (212)
T ss_dssp ---------------------------------------G---------------TTTT----TT---EEEEEEETT-SS
T ss_pred ---------------------------------------h---------------hhhh--ccccCCCCeEEEEeCCCCC
Confidence 0 0000 1235789999999999999
Q ss_pred CCHHHHHHHHHHcCCCccEEEcCCCCCCCCCCChH
Q 045774 227 VPPAVAEYMRRHLGGPTVLEFLPTHGHLPHVSSPA 261 (275)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~ 261 (275)
++++.++.+.+...+..+++.. ++||.++...++
T Consensus 175 ~~~~~s~~L~~~~~~~~~v~~h-~gGH~vP~~~~~ 208 (212)
T PF03959_consen 175 VPPERSEALAEMFDPDARVIEH-DGGHHVPRKKED 208 (212)
T ss_dssp S-HHHHHHHHHHHHHHEEEEEE-SSSSS----HHH
T ss_pred cchHHHHHHHHhccCCcEEEEE-CCCCcCcCChhh
Confidence 9998888888877652345544 589999987553
No 116
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.94 E-value=1.3e-09 Score=87.28 Aligned_cols=99 Identities=16% Similarity=0.213 Sum_probs=54.4
Q ss_pred ceEEEEcCCCC-ChhhhhhhHHHhhc-CCE---EEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhCCCceEEE
Q 045774 25 SIIVFSHGFGS-DQSVWSRVIPSFTR-AYR---VISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALEIDRCAFV 99 (275)
Q Consensus 25 ~~ivllHG~~~-~~~~w~~~~~~l~~-~~~---via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lv 99 (275)
.||||+||.+. ....|..+.+.|.+ +|. |+++++-....+...........+..++++-+.+++++-|- ++.||
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TGa-kVDIV 80 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTGA-KVDIV 80 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT---EEEE
T ss_pred CCEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhCC-EEEEE
Confidence 37999999988 67999999998876 687 89998744332211000000011223444444455555577 99999
Q ss_pred EeChhHHHHHHHHHhCCccccceeee
Q 045774 100 GHSVSAMIGLLAAIHRPNLFSRLILI 125 (275)
Q Consensus 100 GhS~GG~val~~a~~~p~~v~~lvli 125 (275)
||||||+++-.+.... ..+++..-+
T Consensus 81 gHS~G~~iaR~yi~~~-~~~d~~~~l 105 (219)
T PF01674_consen 81 GHSMGGTIARYYIKGG-GGADKVVNL 105 (219)
T ss_dssp EETCHHHHHHHHHHHC-TGGGTEEE-
T ss_pred EcCCcCHHHHHHHHHc-CCCCcccCc
Confidence 9999999987776533 444444433
No 117
>PRK04940 hypothetical protein; Provisional
Probab=98.94 E-value=2.2e-07 Score=71.61 Aligned_cols=52 Identities=13% Similarity=0.100 Sum_probs=36.7
Q ss_pred EEEEEeCCCCCCCHHHHHHHHHHcCCCccEEEcCCCCCCCCCCChHHHHHHHHHHHH
Q 045774 216 VCIIQSSVDLSVPPAVAEYMRRHLGGPTVLEFLPTHGHLPHVSSPAPVANAIQQLLR 272 (275)
Q Consensus 216 ~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 272 (275)
.+++..+.|++.....+. +...+..++++.+++.| -+++-++....|.+|+.
T Consensus 127 ~~vllq~gDEvLDyr~a~---~~y~~~y~~~v~~GGdH--~f~~fe~~l~~I~~F~~ 178 (180)
T PRK04940 127 CLVILSRNDEVLDSQRTA---EELHPYYEIVWDEEQTH--KFKNISPHLQRIKAFKT 178 (180)
T ss_pred EEEEEeCCCcccCHHHHH---HHhccCceEEEECCCCC--CCCCHHHHHHHHHHHHh
Confidence 589999999999877544 33344225777787777 45566667788888875
No 118
>PRK10115 protease 2; Provisional
Probab=98.90 E-value=9.9e-08 Score=89.61 Aligned_cols=105 Identities=20% Similarity=0.228 Sum_probs=72.0
Q ss_pred CceEEEEcCCCCCh--hhhhhhHHH-hhcCCEEEEEccCCCCCCCCCCC----CcccccchhHHHHHHHHHHHHh--CCC
Q 045774 24 QSIIVFSHGFGSDQ--SVWSRVIPS-FTRAYRVISFDLMCSGSCDPTNY----DFQRYATLDGYVDDLLSFLDAL--EID 94 (275)
Q Consensus 24 ~~~ivllHG~~~~~--~~w~~~~~~-l~~~~~via~Dl~G~G~S~~~~~----~~~~~~~~~~~a~dl~~~l~~l--~~~ 94 (275)
.|.||++||-...+ ..|...... +..+|-|..++.||-|.=...-+ ...+..+++|+++-+..++++- ..+
T Consensus 445 ~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w~~~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~ 524 (686)
T PRK10115 445 NPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWYEDGKFLKKKNTFNDYLDACDALLKLGYGSPS 524 (686)
T ss_pred CCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCChH
Confidence 37899999955444 345544444 45589999999998764321000 0011135777776666666542 235
Q ss_pred ceEEEEeChhHHHHHHHHHhCCccccceeeecCC
Q 045774 95 RCAFVGHSVSAMIGLLAAIHRPNLFSRLILIGGS 128 (275)
Q Consensus 95 ~~~lvGhS~GG~val~~a~~~p~~v~~lvli~~~ 128 (275)
++.+.|.|.||+++..++.++|++++++|...+.
T Consensus 525 rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~ 558 (686)
T PRK10115 525 LCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPF 558 (686)
T ss_pred HeEEEEECHHHHHHHHHHhcChhheeEEEecCCc
Confidence 7999999999999999999999999999987654
No 119
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.89 E-value=8.9e-09 Score=83.91 Aligned_cols=100 Identities=27% Similarity=0.373 Sum_probs=71.2
Q ss_pred ceEEEEcCCCCChhhhhhhHHHhhc-CCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHH-HHh------CCCce
Q 045774 25 SIIVFSHGFGSDQSVWSRVIPSFTR-AYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFL-DAL------EIDRC 96 (275)
Q Consensus 25 ~~ivllHG~~~~~~~w~~~~~~l~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l-~~l------~~~~~ 96 (275)
|+|||+||++....+|..++++++. +|-|+++|+...+..+. .....++...++.+.+=+ ..+ +..++
T Consensus 18 PVv~f~~G~~~~~s~Ys~ll~hvAShGyIVV~~d~~~~~~~~~----~~~~~~~~~vi~Wl~~~L~~~l~~~v~~D~s~l 93 (259)
T PF12740_consen 18 PVVLFLHGFLLINSWYSQLLEHVASHGYIVVAPDLYSIGGPDD----TDEVASAAEVIDWLAKGLESKLPLGVKPDFSKL 93 (259)
T ss_pred CEEEEeCCcCCCHHHHHHHHHHHHhCceEEEEecccccCCCCc----chhHHHHHHHHHHHHhcchhhccccccccccce
Confidence 6899999999888889999999987 79999999776543211 011111222222222211 121 34589
Q ss_pred EEEEeChhHHHHHHHHHhC-----CccccceeeecCC
Q 045774 97 AFVGHSVSAMIGLLAAIHR-----PNLFSRLILIGGS 128 (275)
Q Consensus 97 ~lvGhS~GG~val~~a~~~-----p~~v~~lvli~~~ 128 (275)
.|.|||-||-+|..++..+ +.++++++++++.
T Consensus 94 ~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPV 130 (259)
T PF12740_consen 94 ALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPV 130 (259)
T ss_pred EEeeeCCCCHHHHHHHhhhcccccccceeEEEEeccc
Confidence 9999999999999999887 6689999999874
No 120
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=98.86 E-value=1.8e-07 Score=74.44 Aligned_cols=206 Identities=17% Similarity=0.190 Sum_probs=101.2
Q ss_pred CceEEEEcCCCCChhhhhhhHHHhhc-CCEEEEEccCCC-CCCCCCCCCcccccchhHHHHHHHHHHHHh---CCCceEE
Q 045774 24 QSIIVFSHGFGSDQSVWSRVIPSFTR-AYRVISFDLMCS-GSCDPTNYDFQRYATLDGYVDDLLSFLDAL---EIDRCAF 98 (275)
Q Consensus 24 ~~~ivllHG~~~~~~~w~~~~~~l~~-~~~via~Dl~G~-G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l---~~~~~~l 98 (275)
+++||+..||+....++..++..|+. +|+|+.||-.-| |.|+.. ... .|+....+++..+++-| |..++-|
T Consensus 30 ~~tiliA~Gf~rrmdh~agLA~YL~~NGFhViRyDsl~HvGlSsG~---I~e-ftms~g~~sL~~V~dwl~~~g~~~~GL 105 (294)
T PF02273_consen 30 NNTILIAPGFARRMDHFAGLAEYLSANGFHVIRYDSLNHVGLSSGD---INE-FTMSIGKASLLTVIDWLATRGIRRIGL 105 (294)
T ss_dssp S-EEEEE-TT-GGGGGGHHHHHHHHTTT--EEEE---B-----------------HHHHHHHHHHHHHHHHHTT---EEE
T ss_pred CCeEEEecchhHHHHHHHHHHHHHhhCCeEEEeccccccccCCCCC---hhh-cchHHhHHHHHHHHHHHHhcCCCcchh
Confidence 35899999999999999999999976 799999998876 777542 122 36888888877766655 7889999
Q ss_pred EEeChhHHHHHHHHHhCCccccceeeecCCCCCcCCCCCcCCCCcchHHHHH-HHHhhhhhh-hhhhhcc--cccCCCCC
Q 045774 99 VGHSVSAMIGLLAAIHRPNLFSRLILIGGSPRFTNDGNYIGGIDPAHMEEVF-RRMESNYES-WVAGFVP--MALGADVP 174 (275)
Q Consensus 99 vGhS~GG~val~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~--~~~~~~~~ 174 (275)
|.-|+-|-+|+..|. .+ .+.-+|+.-+... +...+ +.+..++-. +...... .+.+....
T Consensus 106 IAaSLSaRIAy~Va~-~i-~lsfLitaVGVVn---------------lr~TLe~al~~Dyl~~~i~~lp~dldfeGh~l~ 168 (294)
T PF02273_consen 106 IAASLSARIAYEVAA-DI-NLSFLITAVGVVN---------------LRDTLEKALGYDYLQLPIEQLPEDLDFEGHNLG 168 (294)
T ss_dssp EEETTHHHHHHHHTT-TS---SEEEEES--S----------------HHHHHHHHHSS-GGGS-GGG--SEEEETTEEEE
T ss_pred hhhhhhHHHHHHHhh-cc-CcceEEEEeeeee---------------HHHHHHHHhccchhhcchhhCCCcccccccccc
Confidence 999999999999887 33 3555555433211 11111 111111111 1111100 00011000
Q ss_pred hHHHHHHHHHhhcCChHHHHHHHHHHhhhchHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHHcCCC-ccEEEcCCCCC
Q 045774 175 DMALQEFSRTLFSMRPDIALHVARTAFAADLRHVLGLVRVPVCIIQSSVDLSVPPAVAEYMRRHLGGP-TVLEFLPTHGH 253 (275)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~-~~~~~i~~~gH 253 (275)
.+.|.+......=+ ........++.+.+|++..++++|..+-......+...+... .++..+++++|
T Consensus 169 ---~~vFv~dc~e~~w~---------~l~ST~~~~k~l~iP~iaF~A~~D~WV~q~eV~~~~~~~~s~~~klysl~Gs~H 236 (294)
T PF02273_consen 169 ---AEVFVTDCFEHGWD---------DLDSTINDMKRLSIPFIAFTANDDDWVKQSEVEELLDNINSNKCKLYSLPGSSH 236 (294)
T ss_dssp ---HHHHHHHHHHTT-S---------SHHHHHHHHTT--S-EEEEEETT-TTS-HHHHHHHHTT-TT--EEEEEETT-SS
T ss_pred ---hHHHHHHHHHcCCc---------cchhHHHHHhhCCCCEEEEEeCCCccccHHHHHHHHHhcCCCceeEEEecCccc
Confidence 12233222110000 000123446788999999999999988776666666555433 57888899999
Q ss_pred CCCCCChHHH
Q 045774 254 LPHVSSPAPV 263 (275)
Q Consensus 254 ~~~~e~p~~~ 263 (275)
-+- |+|-..
T Consensus 237 dL~-enl~vl 245 (294)
T PF02273_consen 237 DLG-ENLVVL 245 (294)
T ss_dssp -TT-SSHHHH
T ss_pred hhh-hChHHH
Confidence 653 555443
No 121
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=98.84 E-value=4.1e-08 Score=78.30 Aligned_cols=89 Identities=19% Similarity=0.212 Sum_probs=70.7
Q ss_pred CChhhhhhhHHHhhcCCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHH-hCCCceEEEEeChhHHHHHHHHH
Q 045774 35 SDQSVWSRVIPSFTRAYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDA-LEIDRCAFVGHSVSAMIGLLAAI 113 (275)
Q Consensus 35 ~~~~~w~~~~~~l~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~-l~~~~~~lvGhS~GG~val~~a~ 113 (275)
++...|..+...|...++|+++|++|+|.+.+. ..+++.+++.+.+.+.. ....+++++|||+||.++..++.
T Consensus 10 ~~~~~~~~~~~~l~~~~~v~~~~~~g~~~~~~~------~~~~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg~~a~~~a~ 83 (212)
T smart00824 10 SGPHEYARLAAALRGRRDVSALPLPGFGPGEPL------PASADALVEAQAEAVLRAAGGRPFVLVGHSSGGLLAHAVAA 83 (212)
T ss_pred CcHHHHHHHHHhcCCCccEEEecCCCCCCCCCC------CCCHHHHHHHHHHHHHHhcCCCCeEEEEECHHHHHHHHHHH
Confidence 677889999999998899999999999876532 12577777776665544 34678999999999999998887
Q ss_pred h---CCccccceeeecCCC
Q 045774 114 H---RPNLFSRLILIGGSP 129 (275)
Q Consensus 114 ~---~p~~v~~lvli~~~~ 129 (275)
+ .++++++++++++.+
T Consensus 84 ~l~~~~~~~~~l~~~~~~~ 102 (212)
T smart00824 84 RLEARGIPPAAVVLLDTYP 102 (212)
T ss_pred HHHhCCCCCcEEEEEccCC
Confidence 6 466799999887643
No 122
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.83 E-value=5.9e-07 Score=66.91 Aligned_cols=159 Identities=18% Similarity=0.223 Sum_probs=105.5
Q ss_pred eEEEEcCCCCC--hhhhhhhHHHhhc-CCEEEEEccCCC-----CCCCCCCCCcccccchhHHHHHHHHHHHHhCCCceE
Q 045774 26 IIVFSHGFGSD--QSVWSRVIPSFTR-AYRVISFDLMCS-----GSCDPTNYDFQRYATLDGYVDDLLSFLDALEIDRCA 97 (275)
Q Consensus 26 ~ivllHG~~~~--~~~w~~~~~~l~~-~~~via~Dl~G~-----G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~ 97 (275)
+|||-||-+.+ +.....+...|+. ++.|..+.++-. |.-.|.+ ....-.+.+...+.++...+.-.+.+
T Consensus 16 tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~---~~~t~~~~~~~~~aql~~~l~~gpLi 92 (213)
T COG3571 16 TILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPP---GSGTLNPEYIVAIAQLRAGLAEGPLI 92 (213)
T ss_pred EEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcC---ccccCCHHHHHHHHHHHhcccCCcee
Confidence 79999997665 5667778888876 699999998733 3222211 11223577888888888888777999
Q ss_pred EEEeChhHHHHHHHHHhCCccccceeeecCCCCCcCCCCCcCCCCcchHHHHHHHHhhhhhhhhhhhcccccCCCCChHH
Q 045774 98 FVGHSVSAMIGLLAAIHRPNLFSRLILIGGSPRFTNDGNYIGGIDPAHMEEVFRRMESNYESWVAGFVPMALGADVPDMA 177 (275)
Q Consensus 98 lvGhS~GG~val~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (275)
+-||||||-++.+.+..-...|.+|++++=.. ..+ +- ++.
T Consensus 93 ~GGkSmGGR~aSmvade~~A~i~~L~clgYPf-hpp------GK--------------------------------Pe~- 132 (213)
T COG3571 93 IGGKSMGGRVASMVADELQAPIDGLVCLGYPF-HPP------GK--------------------------------PEQ- 132 (213)
T ss_pred eccccccchHHHHHHHhhcCCcceEEEecCcc-CCC------CC--------------------------------ccc-
Confidence 99999999998877765544588998875210 000 00 000
Q ss_pred HHHHHHHhhcCChHHHHHHHHHHhhhchHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHHcCCCccEEEcCCCCCCC
Q 045774 178 LQEFSRTLFSMRPDIALHVARTAFAADLRHVLGLVRVPVCIIQSSVDLSVPPAVAEYMRRHLGGPTVLEFLPTHGHLP 255 (275)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~ 255 (275)
+ -.+-+..+++|++|.+|+.|.+-.-+....+ .+....++++++++.|.+
T Consensus 133 -------~-------------------Rt~HL~gl~tPtli~qGtrD~fGtr~~Va~y--~ls~~iev~wl~~adHDL 182 (213)
T COG3571 133 -------L-------------------RTEHLTGLKTPTLITQGTRDEFGTRDEVAGY--ALSDPIEVVWLEDADHDL 182 (213)
T ss_pred -------c-------------------hhhhccCCCCCeEEeecccccccCHHHHHhh--hcCCceEEEEeccCcccc
Confidence 0 0112456889999999999987654433211 133335788999999965
No 123
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=98.80 E-value=1.6e-08 Score=81.46 Aligned_cols=50 Identities=28% Similarity=0.466 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHh-CC--CceEEEEeChhHHHHHHHHHhCCccccceeeecCCCC
Q 045774 80 YVDDLLSFLDAL-EI--DRCAFVGHSVSAMIGLLAAIHRPNLFSRLILIGGSPR 130 (275)
Q Consensus 80 ~a~dl~~~l~~l-~~--~~~~lvGhS~GG~val~~a~~~p~~v~~lvli~~~~~ 130 (275)
+-++..++|... .+ +++.|+|.|.||-+|+.+|.++| .|+.+|.++++..
T Consensus 5 yfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~ 57 (213)
T PF08840_consen 5 YFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSV 57 (213)
T ss_dssp HHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB
T ss_pred HHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCcee
Confidence 455666677655 33 58999999999999999999999 8999999987653
No 124
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.79 E-value=2.4e-08 Score=85.43 Aligned_cols=104 Identities=21% Similarity=0.309 Sum_probs=65.1
Q ss_pred CCCceEEEEcCCCCCh--hhhh-hhHHH-hhc---CCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHh---
Q 045774 22 QGQSIIVFSHGFGSDQ--SVWS-RVIPS-FTR---AYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDAL--- 91 (275)
Q Consensus 22 ~g~~~ivllHG~~~~~--~~w~-~~~~~-l~~---~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l--- 91 (275)
...|+++++|||..+. ..|- .+... |.. +++||++|+...-.. . . .......+...+.+..+++.|
T Consensus 69 ~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~--~-Y-~~a~~n~~~vg~~la~~l~~L~~~ 144 (331)
T PF00151_consen 69 PSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASN--N-Y-PQAVANTRLVGRQLAKFLSFLINN 144 (331)
T ss_dssp TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS----H-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccc--c-c-cchhhhHHHHHHHHHHHHHHHHhh
Confidence 3457999999998877 4554 44553 443 689999999743211 0 0 011123445555555555544
Q ss_pred ---CCCceEEEEeChhHHHHHHHHHhCCc--cccceeeecCCC
Q 045774 92 ---EIDRCAFVGHSVSAMIGLLAAIHRPN--LFSRLILIGGSP 129 (275)
Q Consensus 92 ---~~~~~~lvGhS~GG~val~~a~~~p~--~v~~lvli~~~~ 129 (275)
..++++|||||+||-||-.++.+... ++.+++.+|++.
T Consensus 145 ~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAg 187 (331)
T PF00151_consen 145 FGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAG 187 (331)
T ss_dssp H---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-
T ss_pred cCCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCccc
Confidence 34689999999999999999988888 999999999864
No 125
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.72 E-value=9.9e-08 Score=77.83 Aligned_cols=102 Identities=25% Similarity=0.241 Sum_probs=63.8
Q ss_pred CCceEEEEcCCCCChhhhhhhHHHhh----cCCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHh----CCC
Q 045774 23 GQSIIVFSHGFGSDQSVWSRVIPSFT----RAYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDAL----EID 94 (275)
Q Consensus 23 g~~~ivllHG~~~~~~~w~~~~~~l~----~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l----~~~ 94 (275)
++..+|||||+..+.+.--.-...+. -...++.+.||+.|.-..-..+. .+...-+..+.++|..| +.+
T Consensus 17 ~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~---~~a~~s~~~l~~~L~~L~~~~~~~ 93 (233)
T PF05990_consen 17 DKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDR---ESARFSGPALARFLRDLARAPGIK 93 (233)
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhh---hhHHHHHHHHHHHHHHHHhccCCc
Confidence 44689999999887544322222222 23489999999988632101111 13444455566666554 567
Q ss_pred ceEEEEeChhHHHHHHHHHh----CC-----ccccceeeecC
Q 045774 95 RCAFVGHSVSAMIGLLAAIH----RP-----NLFSRLILIGG 127 (275)
Q Consensus 95 ~~~lvGhS~GG~val~~a~~----~p-----~~v~~lvli~~ 127 (275)
++++++||||+.+.+.+... .+ .++..+++.++
T Consensus 94 ~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~Ap 135 (233)
T PF05990_consen 94 RIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAP 135 (233)
T ss_pred eEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECC
Confidence 89999999999998875433 22 25677777653
No 126
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=98.70 E-value=5.6e-07 Score=69.69 Aligned_cols=95 Identities=17% Similarity=0.199 Sum_probs=67.3
Q ss_pred eEEEEcCCCCChhhhhhhHHHhhc-CCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHH----hCCCceEEEE
Q 045774 26 IIVFSHGFGSDQSVWSRVIPSFTR-AYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDA----LEIDRCAFVG 100 (275)
Q Consensus 26 ~ivllHG~~~~~~~w~~~~~~l~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~----l~~~~~~lvG 100 (275)
.+||+-|=++-...=+.+.+.|++ ++.|+.+|-+=|=.+.+ |-++.++|+.+++++ .+.++++|||
T Consensus 4 ~~v~~SGDgGw~~~d~~~a~~l~~~G~~VvGvdsl~Yfw~~r---------tP~~~a~Dl~~~i~~y~~~w~~~~vvLiG 74 (192)
T PF06057_consen 4 LAVFFSGDGGWRDLDKQIAEALAKQGVPVVGVDSLRYFWSER---------TPEQTAADLARIIRHYRARWGRKRVVLIG 74 (192)
T ss_pred EEEEEeCCCCchhhhHHHHHHHHHCCCeEEEechHHHHhhhC---------CHHHHHHHHHHHHHHHHHHhCCceEEEEe
Confidence 467777755544433456677876 79999999665544432 346667777776664 4778999999
Q ss_pred eChhHHHHHHHHHhCCc----cccceeeecCCC
Q 045774 101 HSVSAMIGLLAAIHRPN----LFSRLILIGGSP 129 (275)
Q Consensus 101 hS~GG~val~~a~~~p~----~v~~lvli~~~~ 129 (275)
.|+|+-|.-....+-|. +|+.++|++++.
T Consensus 75 YSFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~ 107 (192)
T PF06057_consen 75 YSFGADVLPFIYNRLPAALRARVAQVVLLSPST 107 (192)
T ss_pred ecCCchhHHHHHhhCCHHHHhheeEEEEeccCC
Confidence 99999887766666664 788888887643
No 127
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=98.69 E-value=8.5e-07 Score=70.45 Aligned_cols=193 Identities=20% Similarity=0.226 Sum_probs=97.5
Q ss_pred CCCceEEEEcCCCCChhhhhhhHHHhhcCCE-EEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhCCCceEEEE
Q 045774 22 QGQSIIVFSHGFGSDQSVWSRVIPSFTRAYR-VISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALEIDRCAFVG 100 (275)
Q Consensus 22 ~g~~~ivllHG~~~~~~~w~~~~~~l~~~~~-via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvG 100 (275)
+++..|||..|||++...+..+. +.+++. ++++|.+.. +++. | --+.+++.|||
T Consensus 9 ~~~~LilfF~GWg~d~~~f~hL~--~~~~~D~l~~yDYr~l--------------~~d~---~------~~~y~~i~lvA 63 (213)
T PF04301_consen 9 NGKELILFFAGWGMDPSPFSHLI--LPENYDVLICYDYRDL--------------DFDF---D------LSGYREIYLVA 63 (213)
T ss_pred CCCeEEEEEecCCCChHHhhhcc--CCCCccEEEEecCccc--------------cccc---c------cccCceEEEEE
Confidence 34458999999999999887764 234554 455654422 1110 1 12468899999
Q ss_pred eChhHHHHHHHHHhCCccccceeeecCCCCCcCCCCCcCCCCcchHHHHHHHHhhhhhhhhhhhcccccCCCCChHHHHH
Q 045774 101 HSVSAMIGLLAAIHRPNLFSRLILIGGSPRFTNDGNYIGGIDPAHMEEVFRRMESNYESWVAGFVPMALGADVPDMALQE 180 (275)
Q Consensus 101 hS~GG~val~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (275)
+|||-.+|..+.... .+++.|.|++++....+ .-++++..+...+..+... -...|...+.+.... .+.
T Consensus 64 WSmGVw~A~~~l~~~--~~~~aiAINGT~~Pid~---~~GIpp~iF~~Tl~~l~ee---~~~kF~rrmcg~~~~---~~~ 132 (213)
T PF04301_consen 64 WSMGVWAANRVLQGI--PFKRAIAINGTPYPIDD---EYGIPPAIFAGTLENLSEE---NLQKFNRRMCGDKEL---LEK 132 (213)
T ss_pred EeHHHHHHHHHhccC--CcceeEEEECCCCCcCC---CCCCCHHHHHHHHHhCCHH---HHHHHHHHhcCCchh---hHH
Confidence 999999997765433 47788888887643321 2244444444433333221 111222222221110 111
Q ss_pred HHHHhhcCCh--HHHHHHHHHHhhhchHhhhCCCCC-cEEEEEeCCCCCCCHHHHHHHHHHcCCCccEEEcCCCCCCCCC
Q 045774 181 FSRTLFSMRP--DIALHVARTAFAADLRHVLGLVRV-PVCIIQSSVDLSVPPAVAEYMRRHLGGPTVLEFLPTHGHLPHV 257 (275)
Q Consensus 181 ~~~~~~~~~~--~~~~~~~~~~~~~d~~~~l~~i~~-P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~ 257 (275)
+.. + ..++ +....-+..+.. ........... =...|.|++|.++|++.++..-+.. ..+..+ +++|+++.
T Consensus 133 f~~-~-~~r~~~~elk~EL~~l~~-~~~~~~~~~~~~wd~aiIg~~D~IFpp~nQ~~~W~~~---~~~~~~-~~~Hy~F~ 205 (213)
T PF04301_consen 133 FQS-F-PPRRSFEELKEELAALYE-FIKKNPPADLFHWDKAIIGKKDRIFPPENQKRAWQGR---CTIVEI-DAPHYPFF 205 (213)
T ss_pred hhc-C-CcCCCHHHHHHHHHHHHH-HHhccCCCCCccccEEEEcCCCEEeCHHHHHHHHhCc---CcEEEe-cCCCcCch
Confidence 111 0 0111 001111111100 00000000001 1357899999999999887665532 235555 58998763
No 128
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=98.69 E-value=1.2e-07 Score=76.18 Aligned_cols=91 Identities=20% Similarity=0.350 Sum_probs=54.8
Q ss_pred EEEEcCCC---CChhhhhhhHHHhh--cCCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHH----HHHH-----hC
Q 045774 27 IVFSHGFG---SDQSVWSRVIPSFT--RAYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLS----FLDA-----LE 92 (275)
Q Consensus 27 ivllHG~~---~~~~~w~~~~~~l~--~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~----~l~~-----l~ 92 (275)
||++||-+ .+......+...++ .++.|+.+|.|=.-.. ++++..+|+.+ +++. .+
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p~~-----------~~p~~~~D~~~a~~~l~~~~~~~~~d 69 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLAPEA-----------PFPAALEDVKAAYRWLLKNADKLGID 69 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TTTS-----------STTHHHHHHHHHHHHHHHTHHHHTEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeeccccccc-----------cccccccccccceeeecccccccccc
Confidence 68999833 22233333444444 4799999999843211 23444444444 4444 23
Q ss_pred CCceEEEEeChhHHHHHHHHHhCCc----cccceeeecCC
Q 045774 93 IDRCAFVGHSVSAMIGLLAAIHRPN----LFSRLILIGGS 128 (275)
Q Consensus 93 ~~~~~lvGhS~GG~val~~a~~~p~----~v~~lvli~~~ 128 (275)
.++++|+|+|-||.+|+.++.+..+ .+++++++.+.
T Consensus 70 ~~~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~ 109 (211)
T PF07859_consen 70 PERIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPW 109 (211)
T ss_dssp EEEEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCH
T ss_pred ccceEEeecccccchhhhhhhhhhhhcccchhhhhccccc
Confidence 4689999999999999988876544 38889888763
No 129
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=98.68 E-value=3.9e-07 Score=73.26 Aligned_cols=106 Identities=15% Similarity=0.191 Sum_probs=68.1
Q ss_pred CceEEEEcCCCCChhhhhhh--HHHhhc--CCEEEEEccCCCCCC----CC-CCCCcccccchhHHHHHHHHHHHHhCC-
Q 045774 24 QSIIVFSHGFGSDQSVWSRV--IPSFTR--AYRVISFDLMCSGSC----DP-TNYDFQRYATLDGYVDDLLSFLDALEI- 93 (275)
Q Consensus 24 ~~~ivllHG~~~~~~~w~~~--~~~l~~--~~~via~Dl~G~G~S----~~-~~~~~~~~~~~~~~a~dl~~~l~~l~~- 93 (275)
.|.||++||.+.+.+.+... +..+++ +|-|+.++......+ .. .............+++-+.++..+.++
T Consensus 16 ~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~~~~iD 95 (220)
T PF10503_consen 16 VPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAARYNID 95 (220)
T ss_pred CCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhhhcccC
Confidence 36899999999999877543 345665 466777775421110 00 000000111233344444445555555
Q ss_pred -CceEEEEeChhHHHHHHHHHhCCccccceeeecCCC
Q 045774 94 -DRCAFVGHSVSAMIGLLAAIHRPNLFSRLILIGGSP 129 (275)
Q Consensus 94 -~~~~lvGhS~GG~val~~a~~~p~~v~~lvli~~~~ 129 (275)
+++.+.|+|.||+.+..++..||+++.++.+.++.+
T Consensus 96 ~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~ 132 (220)
T PF10503_consen 96 PSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVP 132 (220)
T ss_pred CCceeeEEECHHHHHHHHHHHhCCccceEEEeecccc
Confidence 479999999999999999999999999998877654
No 130
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.67 E-value=6.4e-08 Score=81.94 Aligned_cols=212 Identities=19% Similarity=0.214 Sum_probs=111.0
Q ss_pred ceEEEEcCCCCChhhhhhhHHHhhc-CCEEEEEccCCC--CCCCCCCCCc---------ccccchhHHHHHHHHH-----
Q 045774 25 SIIVFSHGFGSDQSVWSRVIPSFTR-AYRVISFDLMCS--GSCDPTNYDF---------QRYATLDGYVDDLLSF----- 87 (275)
Q Consensus 25 ~~ivllHG~~~~~~~w~~~~~~l~~-~~~via~Dl~G~--G~S~~~~~~~---------~~~~~~~~~a~dl~~~----- 87 (275)
|.|||-||.+++...|..+.+.+++ +|-|.++|.||. |......... ++...+....+.|.+.
T Consensus 72 PlvvlshG~Gs~~~~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~sP~ 151 (365)
T COG4188 72 PLVVLSHGSGSYVTGFAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQLTASPA 151 (365)
T ss_pred CeEEecCCCCCCccchhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHhhcCcc
Confidence 6899999999999999999999987 799999999984 4332211110 1111233333333332
Q ss_pred H-HHhCCCceEEEEeChhHHHHHHHHHhCCccccceeeecCCCCCcCCCCCcCCCCcchHHHHHHHHhhhhhhhhhhhcc
Q 045774 88 L-DALEIDRCAFVGHSVSAMIGLLAAIHRPNLFSRLILIGGSPRFTNDGNYIGGIDPAHMEEVFRRMESNYESWVAGFVP 166 (275)
Q Consensus 88 l-~~l~~~~~~lvGhS~GG~val~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (275)
+ ++++..++.++|||+||.-+++.+....+.....--..... .. +. .....+... +......|.. .
T Consensus 152 l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~~~~~~~~C~~~~-~~----~~-~~~~~~~~~----l~q~~av~~~---~ 218 (365)
T COG4188 152 LAGRLDPQRVGVLGHSFGGYTAMELAGAELDAEALLQHCESAS-RI----CL-DPPGLNGRL----LNQCAAVWLP---R 218 (365)
T ss_pred cccccCccceEEEecccccHHHHHhccccccHHHHHHHhhhhh-hc----cc-CCCCcChhh----hccccccccc---h
Confidence 1 12334579999999999999998765543211111000000 00 00 000000000 0000000000 0
Q ss_pred cccCCCCChHHHHHHHHHhhcCChHHHHHHHHHHhhhchHhhhCCCCCcEEEEEeCCCCCCCHHH-HHHHHHHcCCC-cc
Q 045774 167 MALGADVPDMALQEFSRTLFSMRPDIALHVARTAFAADLRHVLGLVRVPVCIIQSSVDLSVPPAV-AEYMRRHLGGP-TV 244 (275)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~l~i~G~~D~~~~~~~-~~~~~~~~~~~-~~ 244 (275)
...+..+. ..+......+. ....|. ..-+..+++|++++.|..|...|... +.+....+++. +.
T Consensus 219 --~~~~~rDp----riravvA~~p~-----~~~~Fg---~tgl~~v~~P~~~~a~s~D~~aP~~~~~~~~f~~l~g~~k~ 284 (365)
T COG4188 219 --QAYDLRDP----RIRAVVAINPA-----LGMIFG---TTGLVKVTDPVLLAAGSADGFAPPVTEQIRPFGYLPGALKY 284 (365)
T ss_pred --hhhccccc----cceeeeeccCC-----cccccc---cccceeeecceeeecccccccCCcccccccccccCCcchhh
Confidence 00000000 00000000000 001111 23467899999999999998766543 34445667764 35
Q ss_pred EEEcCCCCCCCCCCChHHH
Q 045774 245 LEFLPTHGHLPHVSSPAPV 263 (275)
Q Consensus 245 ~~~i~~~gH~~~~e~p~~~ 263 (275)
+..++++.|+.++|-+++.
T Consensus 285 ~~~vp~a~h~sfl~~~~~~ 303 (365)
T COG4188 285 LRLVPGATHFSFLELCKEG 303 (365)
T ss_pred eeecCCCccccccccCccc
Confidence 7778999999999999885
No 131
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.65 E-value=7.2e-08 Score=77.91 Aligned_cols=83 Identities=17% Similarity=0.348 Sum_probs=49.6
Q ss_pred CceEEEEcCCCCChhhhhhhHHHhhc---CCEEEEEccCCCCCCCCCCCCcccccchhHHHHH----HHHHHHHhCCC--
Q 045774 24 QSIIVFSHGFGSDQSVWSRVIPSFTR---AYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDD----LLSFLDALEID-- 94 (275)
Q Consensus 24 ~~~ivllHG~~~~~~~w~~~~~~l~~---~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~d----l~~~l~~l~~~-- 94 (275)
...|||+||+.++...|..+...+.. .+.-..+...++-... ...+..++..++. +.+.++....+
T Consensus 4 ~hLvV~vHGL~G~~~d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~-----~~T~~gI~~~g~rL~~eI~~~~~~~~~~~~ 78 (217)
T PF05057_consen 4 VHLVVFVHGLWGNPADMRYLKNHLEKIPEDLPNARIVVLGYSNNE-----FKTFDGIDVCGERLAEEILEHIKDYESKIR 78 (217)
T ss_pred CEEEEEeCCCCCCHHHHHHHHHHHHHhhhhcchhhhhhhcccccc-----cccchhhHHHHHHHHHHHHHhccccccccc
Confidence 35799999999999999888776655 3321122222221111 0111235555544 44444444443
Q ss_pred ceEEEEeChhHHHHHHH
Q 045774 95 RCAFVGHSVSAMIGLLA 111 (275)
Q Consensus 95 ~~~lvGhS~GG~val~~ 111 (275)
++++|||||||.|+-.+
T Consensus 79 ~IsfIgHSLGGli~r~a 95 (217)
T PF05057_consen 79 KISFIGHSLGGLIARYA 95 (217)
T ss_pred cceEEEecccHHHHHHH
Confidence 79999999999997543
No 132
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.63 E-value=1.7e-07 Score=78.02 Aligned_cols=97 Identities=18% Similarity=0.287 Sum_probs=67.3
Q ss_pred cCCCceEEEEcCCCCChhhhhh--hHHHhhcCCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHH-HHHHhCC--Cc
Q 045774 21 GQGQSIIVFSHGFGSDQSVWSR--VIPSFTRAYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLS-FLDALEI--DR 95 (275)
Q Consensus 21 g~g~~~ivllHG~~~~~~~w~~--~~~~l~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~-~l~~l~~--~~ 95 (275)
|+|+..|+++-|. +..+.- +...++-+|.|+.+.+||++.|+...+... +. .-++.+.+ .++.|+. ++
T Consensus 240 ~ngq~LvIC~EGN---AGFYEvG~m~tP~~lgYsvLGwNhPGFagSTG~P~p~n---~~-nA~DaVvQfAI~~Lgf~~ed 312 (517)
T KOG1553|consen 240 GNGQDLVICFEGN---AGFYEVGVMNTPAQLGYSVLGWNHPGFAGSTGLPYPVN---TL-NAADAVVQFAIQVLGFRQED 312 (517)
T ss_pred CCCceEEEEecCC---ccceEeeeecChHHhCceeeccCCCCccccCCCCCccc---ch-HHHHHHHHHHHHHcCCCccc
Confidence 5566677888885 333321 223455689999999999999975432211 22 23334444 4456664 57
Q ss_pred eEEEEeChhHHHHHHHHHhCCccccceeee
Q 045774 96 CAFVGHSVSAMIGLLAAIHRPNLFSRLILI 125 (275)
Q Consensus 96 ~~lvGhS~GG~val~~a~~~p~~v~~lvli 125 (275)
++|.|||.||+.++.+|..||+ ||++|+=
T Consensus 313 IilygWSIGGF~~~waAs~YPd-VkavvLD 341 (517)
T KOG1553|consen 313 IILYGWSIGGFPVAWAASNYPD-VKAVVLD 341 (517)
T ss_pred eEEEEeecCCchHHHHhhcCCC-ceEEEee
Confidence 9999999999999999999996 8888863
No 133
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=98.62 E-value=6.8e-07 Score=69.34 Aligned_cols=188 Identities=20% Similarity=0.252 Sum_probs=107.7
Q ss_pred eEEecC--CCceEEEEcC--C--CCChhhhhhhHHHhhcCCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHH
Q 045774 17 VRVVGQ--GQSIIVFSHG--F--GSDQSVWSRVIPSFTRAYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDA 90 (275)
Q Consensus 17 ~~~~g~--g~~~ivllHG--~--~~~~~~w~~~~~~l~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~ 90 (275)
+-+||+ .++..+|||| | +....+-..+-..+..+|+|..+ |++.+.... .-..++.++..-+.=+++.
T Consensus 58 VDIwg~~~~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasv---gY~l~~q~h---tL~qt~~~~~~gv~filk~ 131 (270)
T KOG4627|consen 58 VDIWGSTNQAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASV---GYNLCPQVH---TLEQTMTQFTHGVNFILKY 131 (270)
T ss_pred EEEecCCCCccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEe---ccCcCcccc---cHHHHHHHHHHHHHHHHHh
Confidence 345664 4468999998 2 33445555666777888999988 477664221 0001344444444445554
Q ss_pred hC-CCceEEEEeChhHHHHHHHHH-hCCccccceeeecCCCCCcCCCCCcCCCCcchHHHHHHHHhhhhhhhhhhhcccc
Q 045774 91 LE-IDRCAFVGHSVSAMIGLLAAI-HRPNLFSRLILIGGSPRFTNDGNYIGGIDPAHMEEVFRRMESNYESWVAGFVPMA 168 (275)
Q Consensus 91 l~-~~~~~lvGhS~GG~val~~a~-~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (275)
.. .+.+.+-|||.|+.+|+.+.. .+..||.++++..+.-. +.++ ...-
T Consensus 132 ~~n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~---------------l~EL---------------~~te 181 (270)
T KOG4627|consen 132 TENTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYD---------------LREL---------------SNTE 181 (270)
T ss_pred cccceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhh---------------HHHH---------------hCCc
Confidence 43 456777799999999987554 45558888887654210 0000 0000
Q ss_pred cCCCCChHHHHHHHHHhhcCChHHHHHHHHHHhhhchHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHHcCCCccEEEc
Q 045774 169 LGADVPDMALQEFSRTLFSMRPDIALHVARTAFAADLRHVLGLVRVPVCIIQSSVDLSVPPAVAEYMRRHLGGPTVLEFL 248 (275)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i 248 (275)
.+.+... .+.-+ ...+ .| ...+..+++|++++.|+.|..--.+..+.++..... ++++.+
T Consensus 182 ~g~dlgL--t~~~a---e~~S-------------cd-l~~~~~v~~~ilVv~~~~espklieQnrdf~~q~~~-a~~~~f 241 (270)
T KOG4627|consen 182 SGNDLGL--TERNA---ESVS-------------CD-LWEYTDVTVWILVVAAEHESPKLIEQNRDFADQLRK-ASFTLF 241 (270)
T ss_pred cccccCc--ccchh---hhcC-------------cc-HHHhcCceeeeeEeeecccCcHHHHhhhhHHHHhhh-cceeec
Confidence 0000000 00000 0001 11 122456789999999999865445666667777665 589999
Q ss_pred CCCCCCCCCCCh
Q 045774 249 PTHGHLPHVSSP 260 (275)
Q Consensus 249 ~~~gH~~~~e~p 260 (275)
+|.+|+--+|+-
T Consensus 242 ~n~~hy~I~~~~ 253 (270)
T KOG4627|consen 242 KNYDHYDIIEET 253 (270)
T ss_pred CCcchhhHHHHh
Confidence 999998666543
No 134
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.61 E-value=1.6e-07 Score=75.55 Aligned_cols=100 Identities=22% Similarity=0.326 Sum_probs=69.2
Q ss_pred ceEEEEcCCCCChhhhhhhHHHhhc-CCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHh-------CCCce
Q 045774 25 SIIVFSHGFGSDQSVWSRVIPSFTR-AYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDAL-------EIDRC 96 (275)
Q Consensus 25 ~~ivllHG~~~~~~~w~~~~~~l~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l-------~~~~~ 96 (275)
|+|+|+|||.-....|..++.+++. +|=|+|+++-.- ..+... ....+....++.+.+-++++ ++++.
T Consensus 47 PVilF~HG~~l~ns~Ys~lL~HIASHGfIVVAPQl~~~--~~p~~~--~Ei~~aa~V~~WL~~gL~~~Lp~~V~~nl~kl 122 (307)
T PF07224_consen 47 PVILFLHGFNLYNSFYSQLLAHIASHGFIVVAPQLYTL--FPPDGQ--DEIKSAASVINWLPEGLQHVLPENVEANLSKL 122 (307)
T ss_pred cEEEEeechhhhhHHHHHHHHHHhhcCeEEEechhhcc--cCCCch--HHHHHHHHHHHHHHhhhhhhCCCCcccccceE
Confidence 6899999999999999999999987 799999998753 212111 11112222333333333332 34579
Q ss_pred EEEEeChhHHHHHHHHHhCCc--cccceeeecCC
Q 045774 97 AFVGHSVSAMIGLLAAIHRPN--LFSRLILIGGS 128 (275)
Q Consensus 97 ~lvGhS~GG~val~~a~~~p~--~v~~lvli~~~ 128 (275)
.|+|||.||-.|..+|..+-. .+++||.||+.
T Consensus 123 al~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV 156 (307)
T PF07224_consen 123 ALSGHSRGGKTAFALALGYATSLKFSALIGIDPV 156 (307)
T ss_pred EEeecCCccHHHHHHHhcccccCchhheeccccc
Confidence 999999999999999887742 47888888764
No 135
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.60 E-value=1.8e-05 Score=63.32 Aligned_cols=241 Identities=14% Similarity=0.118 Sum_probs=132.6
Q ss_pred CCCceEEEEcCCCCChhhhhhhHHHhhc----CCEEEEEccCCCCCCC------CCCCCcccccchhHHHHHHHHHHHHh
Q 045774 22 QGQSIIVFSHGFGSDQSVWSRVIPSFTR----AYRVISFDLMCSGSCD------PTNYDFQRYATLDGYVDDLLSFLDAL 91 (275)
Q Consensus 22 ~g~~~ivllHG~~~~~~~w~~~~~~l~~----~~~via~Dl~G~G~S~------~~~~~~~~~~~~~~~a~dl~~~l~~l 91 (275)
...+.|++++|+++....+.++...|.. ++++..+-..||-.-. ++.. -....+++++++-=.++++..
T Consensus 27 ~~~~li~~IpGNPG~~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~-~~eifsL~~QV~HKlaFik~~ 105 (301)
T KOG3975|consen 27 EDKPLIVWIPGNPGLLGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHT-NEEIFSLQDQVDHKLAFIKEY 105 (301)
T ss_pred CCceEEEEecCCCCchhHHHHHHHHHHHhcccccceeEEeccccccCCcccccccccc-cccccchhhHHHHHHHHHHHh
Confidence 4446799999999999999998877654 3668888777776332 1111 112347999999999999877
Q ss_pred C--CCceEEEEeChhHHHHHHHHHhC--CccccceeeecCCCCCcCCCCCcCCCCcch----HHHHH---H-----HHhh
Q 045774 92 E--IDRCAFVGHSVSAMIGLLAAIHR--PNLFSRLILIGGSPRFTNDGNYIGGIDPAH----MEEVF---R-----RMES 155 (275)
Q Consensus 92 ~--~~~~~lvGhS~GG~val~~a~~~--p~~v~~lvli~~~~~~~~~~~~~~~~~~~~----~~~~~---~-----~~~~ 155 (275)
- ..+++++|||-|++..+.+.-.. --+|.+++++=++-....+. ..+..... +.... . .+..
T Consensus 106 ~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTIerM~eS--pnG~~~t~~l~~~~hv~~lt~yi~~~~lp~ 183 (301)
T KOG3975|consen 106 VPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTIERMHES--PNGIRLTKVLRYLPHVVSLTSYIYWILLPG 183 (301)
T ss_pred CCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchHHHHhcC--CCceEeeeeeeeehhhhheeeeeeeecChH
Confidence 3 45799999999999998876422 23577777763321100000 00000000 00000 0 0000
Q ss_pred hhhhhhhhhcccccCCCCChHHHHHHHHHhhcCChHHHHHHH----HHHh--hhchHhhhCCCCCcEEEEEeCCCCCCCH
Q 045774 156 NYESWVAGFVPMALGADVPDMALQEFSRTLFSMRPDIALHVA----RTAF--AADLRHVLGLVRVPVCIIQSSVDLSVPP 229 (275)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~--~~d~~~~l~~i~~P~l~i~G~~D~~~~~ 229 (275)
..+.+..++.-... +. +.+ .....+.-..++...+.. ..+. ...-.+.+++-.+-+.+..|++|..+|.
T Consensus 184 ~ir~~Li~~~l~~~-n~-p~e---~l~tal~l~h~~v~rn~v~la~qEm~eV~~~d~e~~een~d~l~Fyygt~DgW~p~ 258 (301)
T KOG3975|consen 184 FIRFILIKFMLCGS-NG-PQE---FLSTALFLTHPQVVRNSVGLAAQEMEEVTTRDIEYCEENLDSLWFYYGTNDGWVPS 258 (301)
T ss_pred HHHHHHHHHhcccC-CC-cHH---HHhhHHHhhcHHHHHHHhhhchHHHHHHHHhHHHHHHhcCcEEEEEccCCCCCcch
Confidence 00011111110000 00 000 000000000111111100 0000 0011223455567889999999999999
Q ss_pred HHHHHHHHHcCCC-ccEEEcCCCCCCCCCCChHHHHHHHHHHH
Q 045774 230 AVAEYMRRHLGGP-TVLEFLPTHGHLPHVSSPAPVANAIQQLL 271 (275)
Q Consensus 230 ~~~~~~~~~~~~~-~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 271 (275)
+....+.+..|.. .++-. +++.|..-+.+-+..++.+.+.+
T Consensus 259 ~~~d~~kdd~~eed~~Lde-dki~HAFV~~~~q~ma~~v~d~~ 300 (301)
T KOG3975|consen 259 HYYDYYKDDVPEEDLKLDE-DKIPHAFVVKHAQYMANAVFDMI 300 (301)
T ss_pred HHHHHHhhhcchhceeecc-ccCCcceeecccHHHHHHHHHhh
Confidence 9999999998863 23443 78999999999998888887654
No 136
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=98.57 E-value=1.1e-05 Score=71.23 Aligned_cols=207 Identities=16% Similarity=0.297 Sum_probs=112.5
Q ss_pred hhHHHhhcCCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHh-----CCCceEEEEeChhHHHHHHHHHhCC
Q 045774 42 RVIPSFTRAYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDAL-----EIDRCAFVGHSVSAMIGLLAAIHRP 116 (275)
Q Consensus 42 ~~~~~l~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l-----~~~~~~lvGhS~GG~val~~a~~~p 116 (275)
.+...|..++.|+.+.+... +....|+++.+....+++++. +..+++|||..-||..++.+|+.+|
T Consensus 92 evG~AL~~GHPvYFV~F~p~---------P~pgQTl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~P 162 (581)
T PF11339_consen 92 EVGVALRAGHPVYFVGFFPE---------PEPGQTLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRP 162 (581)
T ss_pred HHHHHHHcCCCeEEEEecCC---------CCCCCcHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCc
Confidence 34557888888887754321 122347888888877777755 2247999999999999999999999
Q ss_pred ccccceeeecCCCCCcC------CCCCcCCCCcchH-HHHHHHHh----------hhhh-------hhhhhhcccccCCC
Q 045774 117 NLFSRLILIGGSPRFTN------DGNYIGGIDPAHM-EEVFRRME----------SNYE-------SWVAGFVPMALGAD 172 (275)
Q Consensus 117 ~~v~~lvli~~~~~~~~------~~~~~~~~~~~~~-~~~~~~~~----------~~~~-------~~~~~~~~~~~~~~ 172 (275)
+.+.-+|+.+++-.+-. .+-|.+++..-.+ ..+...+. .+++ -|.+ .......-+
T Consensus 163 d~~gplvlaGaPlsywaG~~g~nPmRy~ggl~ggsw~~~l~sDlG~G~fdGa~lv~nFe~lnPa~~~w~K-~y~Ly~~iD 241 (581)
T PF11339_consen 163 DLVGPLVLAGAPLSYWAGERGDNPMRYMGGLLGGSWLTALVSDLGNGRFDGAWLVQNFENLNPANTYWSK-YYDLYANID 241 (581)
T ss_pred CccCceeecCCCcccccCCCCCCcHHHhcCCCcchHHHHHHHHcCCCccCcHHHHhhhhccChhHHHHHH-HHHHHhccC
Confidence 99998887665332211 1112222222111 11111111 1111 0111 111110111
Q ss_pred CCh---HHHHHHHHHhhcCChHHHHHHHHHHhhhc------------hHhhhCCCCCcEEEEEeCCCCCCCHHHH-HHHH
Q 045774 173 VPD---MALQEFSRTLFSMRPDIALHVARTAFAAD------------LRHVLGLVRVPVCIIQSSVDLSVPPAVA-EYMR 236 (275)
Q Consensus 173 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~d------------~~~~l~~i~~P~l~i~G~~D~~~~~~~~-~~~~ 236 (275)
.+. ...+.++.....++.+....+...+|..+ ..-.|++|++|+.+.+|..|.++|++.+ .++.
T Consensus 242 ~e~~Rfl~FErWwgg~~~l~~~ei~~Iv~nLFvgNrL~~g~~~~~~G~~~DLr~Ir~Piivfas~gDnITPP~QaL~WI~ 321 (581)
T PF11339_consen 242 TERERFLEFERWWGGFYDLNGEEILWIVENLFVGNRLAKGEFRVSDGRRVDLRNIRSPIIVFASYGDNITPPQQALNWIP 321 (581)
T ss_pred CchhhhhHHHHHhCCccCCCHHHHHHHHHHHhccchhccCceeccCCcEeehhhCCCCEEEEeccCCCCCChhHhccchH
Confidence 111 11233333334445555555555554322 1234789999999999999999998765 3444
Q ss_pred HHcC------CCc-cE--EEcCCCCCCCCCC
Q 045774 237 RHLG------GPT-VL--EFLPTHGHLPHVS 258 (275)
Q Consensus 237 ~~~~------~~~-~~--~~i~~~gH~~~~e 258 (275)
+.-+ ... ++ .+.+..||.--.-
T Consensus 322 dlY~~~~ei~a~gQ~IVY~~h~~vGHLGIFV 352 (581)
T PF11339_consen 322 DLYPDTEEIKAAGQTIVYLLHESVGHLGIFV 352 (581)
T ss_pred hhcCCHHHHHhCCCEEEEEecCCCCceEEEe
Confidence 3222 111 22 2347799984433
No 137
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=98.55 E-value=1e-06 Score=68.71 Aligned_cols=100 Identities=19% Similarity=0.300 Sum_probs=67.5
Q ss_pred eEEEEcCCCCChhhhhhhHHHhhc-CCEEEEEccC--------CCCCC---CC---CCCCcccccchhHHHHHHHHHHHH
Q 045774 26 IIVFSHGFGSDQSVWSRVIPSFTR-AYRVISFDLM--------CSGSC---DP---TNYDFQRYATLDGYVDDLLSFLDA 90 (275)
Q Consensus 26 ~ivllHG~~~~~~~w~~~~~~l~~-~~~via~Dl~--------G~G~S---~~---~~~~~~~~~~~~~~a~dl~~~l~~ 90 (275)
.|||+||.+.+...|..++..|.- +-+.|++--| |.+.- +. ...-..+..++..-++.+..++++
T Consensus 5 tIi~LHglGDsg~~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~Li~~ 84 (206)
T KOG2112|consen 5 TIIFLHGLGDSGSGWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANLIDN 84 (206)
T ss_pred EEEEEecCCCCCccHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHHHHH
Confidence 799999999999999888777653 4566666333 11100 00 000011223567777778888875
Q ss_pred h---CC--CceEEEEeChhHHHHHHHHHhCCccccceeee
Q 045774 91 L---EI--DRCAFVGHSVSAMIGLLAAIHRPNLFSRLILI 125 (275)
Q Consensus 91 l---~~--~~~~lvGhS~GG~val~~a~~~p~~v~~lvli 125 (275)
. |+ .++.+-|.|+||+++++.+.++|..+.+.+-.
T Consensus 85 e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~ 124 (206)
T KOG2112|consen 85 EPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFAL 124 (206)
T ss_pred HHHcCCCccceeEcccCchHHHHHHHHhccccccceeecc
Confidence 5 43 36888899999999999999998776666544
No 138
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.53 E-value=3.2e-07 Score=79.01 Aligned_cols=97 Identities=14% Similarity=0.163 Sum_probs=77.0
Q ss_pred eEEEEcCCCCChhhhhhhHHHhhc-CCE---EEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhCCCceEEEEe
Q 045774 26 IIVFSHGFGSDQSVWSRVIPSFTR-AYR---VISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALEIDRCAFVGH 101 (275)
Q Consensus 26 ~ivllHG~~~~~~~w~~~~~~l~~-~~~---via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGh 101 (275)
++|++||.+.+...|..+...+.. ++. +.++++++-..+.+. ...-+.+-+.+.+++...+-+++.||||
T Consensus 61 pivlVhG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~------~~~~~ql~~~V~~~l~~~ga~~v~LigH 134 (336)
T COG1075 61 PIVLVHGLGGGYGNFLPLDYRLAILGWLTNGVYAFELSGGDGTYSL------AVRGEQLFAYVDEVLAKTGAKKVNLIGH 134 (336)
T ss_pred eEEEEccCcCCcchhhhhhhhhcchHHHhcccccccccccCCCccc------cccHHHHHHHHHHHHhhcCCCceEEEee
Confidence 899999998899999888776655 454 888888866222111 1235667777888888888899999999
Q ss_pred ChhHHHHHHHHHhCC--ccccceeeecCC
Q 045774 102 SVSAMIGLLAAIHRP--NLFSRLILIGGS 128 (275)
Q Consensus 102 S~GG~val~~a~~~p--~~v~~lvli~~~ 128 (275)
||||.++.+++...+ .+|+.++.++++
T Consensus 135 S~GG~~~ry~~~~~~~~~~V~~~~tl~tp 163 (336)
T COG1075 135 SMGGLDSRYYLGVLGGANRVASVVTLGTP 163 (336)
T ss_pred cccchhhHHHHhhcCccceEEEEEEeccC
Confidence 999999999999988 899999999764
No 139
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=98.53 E-value=4.2e-06 Score=72.96 Aligned_cols=108 Identities=15% Similarity=0.196 Sum_probs=75.7
Q ss_pred CCCceEEEEcCCCCChhhhhhhH------HHhhc-CCEEEEEccCCCCCCCC-CCCC---cc-cc-cchhHHHH-HHH--
Q 045774 22 QGQSIIVFSHGFGSDQSVWSRVI------PSFTR-AYRVISFDLMCSGSCDP-TNYD---FQ-RY-ATLDGYVD-DLL-- 85 (275)
Q Consensus 22 ~g~~~ivllHG~~~~~~~w~~~~------~~l~~-~~~via~Dl~G~G~S~~-~~~~---~~-~~-~~~~~~a~-dl~-- 85 (275)
..+|+|+|.||+.+++..|-... =.|++ +|.|-.-..||--.|.. .... .. .+ .||++++. ||-
T Consensus 71 ~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~ 150 (403)
T KOG2624|consen 71 KKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRKHKKLSPSSDKEFWDFSWHEMGTYDLPAM 150 (403)
T ss_pred CCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccchhhcccCCcCCcceeecchhhhhhcCHHHH
Confidence 34578999999999999996543 24555 79999999999877742 1111 11 11 14555432 344
Q ss_pred --HHHHHhCCCceEEEEeChhHHHHHHHHHhCCc---cccceeeecCCC
Q 045774 86 --SFLDALEIDRCAFVGHSVSAMIGLLAAIHRPN---LFSRLILIGGSP 129 (275)
Q Consensus 86 --~~l~~l~~~~~~lvGhS~GG~val~~a~~~p~---~v~~lvli~~~~ 129 (275)
-+++.-+.++.+.||||-|+.+...+....|+ +|+.++++++..
T Consensus 151 IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~ 199 (403)
T KOG2624|consen 151 IDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAA 199 (403)
T ss_pred HHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecchh
Confidence 44444477899999999999999988888876 688888887654
No 140
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=98.49 E-value=5.6e-06 Score=70.77 Aligned_cols=98 Identities=19% Similarity=0.244 Sum_probs=59.9
Q ss_pred CceEEEEcCCC---CChhhhhhhHHHhh--cCCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHH---hC--C
Q 045774 24 QSIIVFSHGFG---SDQSVWSRVIPSFT--RAYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDA---LE--I 93 (275)
Q Consensus 24 ~~~ivllHG~~---~~~~~w~~~~~~l~--~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~---l~--~ 93 (275)
.|.||++||-+ ++....+..+..+. .++.|+.+|.|---... . ...+++..+.+.-+.++ ++ .
T Consensus 79 ~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~~-----~--p~~~~d~~~a~~~l~~~~~~~g~dp 151 (312)
T COG0657 79 APVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEHP-----F--PAALEDAYAAYRWLRANAAELGIDP 151 (312)
T ss_pred CcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCCC-----C--CchHHHHHHHHHHHHhhhHhhCCCc
Confidence 46899999833 34444445544443 37999999988542211 0 11244433333333322 33 4
Q ss_pred CceEEEEeChhHHHHHHHHHhCCc----cccceeeecCC
Q 045774 94 DRCAFVGHSVSAMIGLLAAIHRPN----LFSRLILIGGS 128 (275)
Q Consensus 94 ~~~~lvGhS~GG~val~~a~~~p~----~v~~lvli~~~ 128 (275)
+++.+.|+|-||.+++.++..-.+ ..+..+++.+.
T Consensus 152 ~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~ 190 (312)
T COG0657 152 SRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPL 190 (312)
T ss_pred cceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecc
Confidence 679999999999999988766554 35666777553
No 141
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=98.48 E-value=1.9e-05 Score=62.25 Aligned_cols=60 Identities=15% Similarity=0.215 Sum_probs=46.8
Q ss_pred hCCCCCcEEEEEeCCCCCCCHHHHHHHHHHcCCCccEEEcCCCCCCCCCCChHHHHHHHHHHHH
Q 045774 209 LGLVRVPVCIIQSSVDLSVPPAVAEYMRRHLGGPTVLEFLPTHGHLPHVSSPAPVANAIQQLLR 272 (275)
Q Consensus 209 l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 272 (275)
.+.+++|.|-|.|+.|.++|...++.|++..+++ .+ +...+||+++-.+| ..+.|.+|+.
T Consensus 159 ~~~i~~PSLHi~G~~D~iv~~~~s~~L~~~~~~a-~v-l~HpggH~VP~~~~--~~~~i~~fi~ 218 (230)
T KOG2551|consen 159 KRPLSTPSLHIFGETDTIVPSERSEQLAESFKDA-TV-LEHPGGHIVPNKAK--YKEKIADFIQ 218 (230)
T ss_pred ccCCCCCeeEEecccceeecchHHHHHHHhcCCC-eE-EecCCCccCCCchH--HHHHHHHHHH
Confidence 3468999999999999999999999999999984 34 44568999998885 3344444443
No 142
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=98.43 E-value=5.7e-06 Score=78.37 Aligned_cols=203 Identities=15% Similarity=0.177 Sum_probs=122.1
Q ss_pred ceEEEEcCCCCCh-------hhhhhhHHHhhcCCEEEEEccCCCCCCCCCC--CCcccc--cchhHHHHHHHHHHHHhC-
Q 045774 25 SIIVFSHGFGSDQ-------SVWSRVIPSFTRAYRVISFDLMCSGSCDPTN--YDFQRY--ATLDGYVDDLLSFLDALE- 92 (275)
Q Consensus 25 ~~ivllHG~~~~~-------~~w~~~~~~l~~~~~via~Dl~G~G~S~~~~--~~~~~~--~~~~~~a~dl~~~l~~l~- 92 (275)
|.+|.+||-+++. -.|..++ .-..++-|+.+|-||.|...... .-..+. ...+|+..-+..+++..-
T Consensus 527 Pllv~~yGGP~sq~v~~~~~~~~~~~~-~s~~g~~v~~vd~RGs~~~G~~~~~~~~~~lG~~ev~D~~~~~~~~~~~~~i 605 (755)
T KOG2100|consen 527 PLLVVVYGGPGSQSVTSKFSVDWNEVV-VSSRGFAVLQVDGRGSGGYGWDFRSALPRNLGDVEVKDQIEAVKKVLKLPFI 605 (755)
T ss_pred CEEEEecCCCCcceeeeeEEecHHHHh-hccCCeEEEEEcCCCcCCcchhHHHHhhhhcCCcchHHHHHHHHHHHhcccc
Confidence 5788888877633 3333331 12337999999999998653210 001111 236677777777776553
Q ss_pred -CCceEEEEeChhHHHHHHHHHhCCccccce-eeecCCCCCcCCCCCcCCCCcchHHHHHHHHhhhhhhhhhhhcccccC
Q 045774 93 -IDRCAFVGHSVSAMIGLLAAIHRPNLFSRL-ILIGGSPRFTNDGNYIGGIDPAHMEEVFRRMESNYESWVAGFVPMALG 170 (275)
Q Consensus 93 -~~~~~lvGhS~GG~val~~a~~~p~~v~~l-vli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (275)
-+++.+-|+|+||++++.+....|+++.++ +.+++...+.- +.... .+. ++.. .
T Consensus 606 D~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~~---yds~~---------------ter----ymg~--p 661 (755)
T KOG2100|consen 606 DRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWLY---YDSTY---------------TER----YMGL--P 661 (755)
T ss_pred cHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeeee---ecccc---------------cHh----hcCC--C
Confidence 357999999999999999999999777777 77776543220 00000 000 0000 0
Q ss_pred CCCChHHHHHHHHHhhcCChHHHHHHHHHHhhhchHhhhCCCCCcE-EEEEeCCCCCCCHHHHHHHHHHcCCC---ccEE
Q 045774 171 ADVPDMALQEFSRTLFSMRPDIALHVARTAFAADLRHVLGLVRVPV-CIIQSSVDLSVPPAVAEYMRRHLGGP---TVLE 246 (275)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~-l~i~G~~D~~~~~~~~~~~~~~~~~~---~~~~ 246 (275)
.. . ...+.+ ......+..++.|. |++||+.|.-++.+.+..+.+.+... ..+.
T Consensus 662 ~~-~---~~~y~e-------------------~~~~~~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~ 718 (755)
T KOG2100|consen 662 SE-N---DKGYEE-------------------SSVSSPANNIKTPKLLLIHGTEDDNVHFQQSAILIKALQNAGVPFRLL 718 (755)
T ss_pred cc-c---cchhhh-------------------ccccchhhhhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCceEEE
Confidence 00 0 000110 11222234456665 99999999999887766666544321 4778
Q ss_pred EcCCCCCCCCCCCh-HHHHHHHHHHHHhhC
Q 045774 247 FLPTHGHLPHVSSP-APVANAIQQLLRRRF 275 (275)
Q Consensus 247 ~i~~~gH~~~~e~p-~~~~~~i~~fl~~~~ 275 (275)
++|+..|.+-.-.. ..+...+..|+..||
T Consensus 719 vypde~H~is~~~~~~~~~~~~~~~~~~~~ 748 (755)
T KOG2100|consen 719 VYPDENHGISYVEVISHLYEKLDRFLRDCF 748 (755)
T ss_pred EeCCCCcccccccchHHHHHHHHHHHHHHc
Confidence 89999998777554 456677788887654
No 143
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=98.42 E-value=5.2e-07 Score=78.82 Aligned_cols=103 Identities=22% Similarity=0.395 Sum_probs=58.0
Q ss_pred ceEEEEcCCCCChhhhhhhHHHhhc-CCEEEEEccCCC-CCCC-C-CCC-------------C-----cccc---c----
Q 045774 25 SIIVFSHGFGSDQSVWSRVIPSFTR-AYRVISFDLMCS-GSCD-P-TNY-------------D-----FQRY---A---- 75 (275)
Q Consensus 25 ~~ivllHG~~~~~~~w~~~~~~l~~-~~~via~Dl~G~-G~S~-~-~~~-------------~-----~~~~---~---- 75 (275)
|+|||.||++++...+..++..|+. +|=|+++|.|.. +-.. . ... + .... .
T Consensus 101 PvvIFSHGlgg~R~~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (379)
T PF03403_consen 101 PVVIFSHGLGGSRTSYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEEEFEL 180 (379)
T ss_dssp EEEEEE--TT--TTTTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGGHHHH
T ss_pred CEEEEeCCCCcchhhHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchhHHHH
Confidence 6899999999999999999999876 799999999954 2110 0 000 0 0000 0
Q ss_pred ---chhHHHHHHHHHHHHh--------------------------CCCceEEEEeChhHHHHHHHHHhCCccccceeeec
Q 045774 76 ---TLDGYVDDLLSFLDAL--------------------------EIDRCAFVGHSVSAMIGLLAAIHRPNLFSRLILIG 126 (275)
Q Consensus 76 ---~~~~~a~dl~~~l~~l--------------------------~~~~~~lvGhS~GG~val~~a~~~p~~v~~lvli~ 126 (275)
-++.=++++..+++.+ +.+++.++|||+||+.++..+.+. .+++..|++|
T Consensus 181 R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~r~~~~I~LD 259 (379)
T PF03403_consen 181 RNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-TRFKAGILLD 259 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT--EEEEES
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-cCcceEEEeC
Confidence 0112233344444332 234689999999999999887766 7899999998
Q ss_pred CC
Q 045774 127 GS 128 (275)
Q Consensus 127 ~~ 128 (275)
+.
T Consensus 260 ~W 261 (379)
T PF03403_consen 260 PW 261 (379)
T ss_dssp --
T ss_pred Cc
Confidence 74
No 144
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=98.35 E-value=4.7e-06 Score=73.66 Aligned_cols=100 Identities=20% Similarity=0.294 Sum_probs=63.2
Q ss_pred ceEEEEcCCC--CChhhhhhhHHHh-hcC----CEEEEEccCCC-CCCCCCCCCcccccchhHHHHHHHHHHHHh-----
Q 045774 25 SIIVFSHGFG--SDQSVWSRVIPSF-TRA----YRVISFDLMCS-GSCDPTNYDFQRYATLDGYVDDLLSFLDAL----- 91 (275)
Q Consensus 25 ~~ivllHG~~--~~~~~w~~~~~~l-~~~----~~via~Dl~G~-G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l----- 91 (275)
|+|+|+||-. .....+. .++.| +++ .-|+.+|-.+. ..+.. ...... -.+.++++|.-++++.
T Consensus 210 PvlyllDG~~w~~~~~~~~-~ld~li~~g~i~P~ivV~id~~~~~~R~~e-l~~~~~--f~~~l~~eLlP~I~~~y~~~~ 285 (411)
T PRK10439 210 PLAILLDGQFWAESMPVWP-ALDSLTHRGQLPPAVYLLIDAIDTTHRSQE-LPCNAD--FWLAVQQELLPQVRAIAPFSD 285 (411)
T ss_pred CEEEEEECHHhhhcCCHHH-HHHHHHHcCCCCceEEEEECCCCccccccc-CCchHH--HHHHHHHHHHHHHHHhCCCCC
Confidence 6899999932 2222222 23333 332 34677775321 11110 001111 2456678888888765
Q ss_pred CCCceEEEEeChhHHHHHHHHHhCCccccceeeecCC
Q 045774 92 EIDRCAFVGHSVSAMIGLLAAIHRPNLFSRLILIGGS 128 (275)
Q Consensus 92 ~~~~~~lvGhS~GG~val~~a~~~p~~v~~lvli~~~ 128 (275)
+-++.+|+|+||||..|+.++.++|+++.+++.++++
T Consensus 286 d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs 322 (411)
T PRK10439 286 DADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGS 322 (411)
T ss_pred CccceEEEEEChHHHHHHHHHHhCcccccEEEEeccc
Confidence 2346899999999999999999999999999998764
No 145
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.30 E-value=4.1e-06 Score=67.15 Aligned_cols=103 Identities=19% Similarity=0.239 Sum_probs=73.1
Q ss_pred eEEEEcCCCCChhhhhhhHHHhhcCCE------EEEEccCCC----CCCCCCCCCc-------ccccchhHHHHHHHHHH
Q 045774 26 IIVFSHGFGSDQSVWSRVIPSFTRAYR------VISFDLMCS----GSCDPTNYDF-------QRYATLDGYVDDLLSFL 88 (275)
Q Consensus 26 ~ivllHG~~~~~~~w~~~~~~l~~~~~------via~Dl~G~----G~S~~~~~~~-------~~~~~~~~~a~dl~~~l 88 (275)
|.+||||.++++.....++..|...++ ++.+|--|- |.=+.....+ ..-.+..+++..+..++
T Consensus 47 PTIfIhGsgG~asS~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~~m 126 (288)
T COG4814 47 PTIFIHGSGGTASSLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLKKAM 126 (288)
T ss_pred ceEEEecCCCChhHHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHHHHH
Confidence 689999999999999999998877653 556665552 1101100000 01125677788888877
Q ss_pred HHh----CCCceEEEEeChhHHHHHHHHHhCCc-----cccceeeecCC
Q 045774 89 DAL----EIDRCAFVGHSVSAMIGLLAAIHRPN-----LFSRLILIGGS 128 (275)
Q Consensus 89 ~~l----~~~~~~lvGhS~GG~val~~a~~~p~-----~v~~lvli~~~ 128 (275)
..| +++.+.+|||||||.-...++..|.+ .+.++|.|++.
T Consensus 127 syL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gp 175 (288)
T COG4814 127 SYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGP 175 (288)
T ss_pred HHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccc
Confidence 766 67899999999999998888877643 48888888764
No 146
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=98.30 E-value=3.6e-05 Score=65.81 Aligned_cols=109 Identities=23% Similarity=0.258 Sum_probs=72.7
Q ss_pred hhhceEEec-------CCCceEEEEcCCCC-----ChhhhhhhHHHhhc--CCEEEEEccCCCCCCCCCCCCcccccchh
Q 045774 13 EALNVRVVG-------QGQSIIVFSHGFGS-----DQSVWSRVIPSFTR--AYRVISFDLMCSGSCDPTNYDFQRYATLD 78 (275)
Q Consensus 13 ~~~~~~~~g-------~g~~~ivllHG~~~-----~~~~w~~~~~~l~~--~~~via~Dl~G~G~S~~~~~~~~~~~~~~ 78 (275)
..+.+|++- +..|.||+.||-|. +...++.+...++. +--|+++|.|=- |.+ .. +..++
T Consensus 72 ~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLA----PEh-~~--Pa~y~ 144 (336)
T KOG1515|consen 72 TNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLA----PEH-PF--PAAYD 144 (336)
T ss_pred CCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccC----CCC-CC--Cccch
Confidence 345666642 23468999998432 36778888888866 467888887733 211 11 12356
Q ss_pred HHHHHHHHHHHH----h--CCCceEEEEeChhHHHHHHHHHhC------CccccceeeecCC
Q 045774 79 GYVDDLLSFLDA----L--EIDRCAFVGHSVSAMIGLLAAIHR------PNLFSRLILIGGS 128 (275)
Q Consensus 79 ~~a~dl~~~l~~----l--~~~~~~lvGhS~GG~val~~a~~~------p~~v~~lvli~~~ 128 (275)
|-.+.+.-++++ . +.+++.|.|=|-||.+|..+|.+. +-++++.|++-+.
T Consensus 145 D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~ 206 (336)
T KOG1515|consen 145 DGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPF 206 (336)
T ss_pred HHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecc
Confidence 666666666654 2 456899999999999998776552 4578999998753
No 147
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=98.27 E-value=1.7e-05 Score=68.42 Aligned_cols=154 Identities=19% Similarity=0.295 Sum_probs=94.2
Q ss_pred HHHHHHHh---CCCceEEEEeChhHHHHHHHHHhCCccccceeeecCCCCCcCCCCCcCCCCcchHHHHHHHHhhhhh-h
Q 045774 84 LLSFLDAL---EIDRCAFVGHSVSAMIGLLAAIHRPNLFSRLILIGGSPRFTNDGNYIGGIDPAHMEEVFRRMESNYE-S 159 (275)
Q Consensus 84 l~~~l~~l---~~~~~~lvGhS~GG~val~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 159 (275)
+.+++++. .++++++.|.|==|..++..|+ ...||++++-+.-.. ++ ....+...+. .+. .
T Consensus 159 vq~~~~~~~~~~i~~FvV~GaSKRGWTtWltaa-~D~RV~aivP~Vid~--LN--------~~~~l~h~y~----~yG~~ 223 (367)
T PF10142_consen 159 VQEFLKKKFGVNIEKFVVTGASKRGWTTWLTAA-VDPRVKAIVPIVIDV--LN--------MKANLEHQYR----SYGGN 223 (367)
T ss_pred HHHHHHhhcCCCccEEEEeCCchHhHHHHHhhc-cCcceeEEeeEEEcc--CC--------cHHHHHHHHH----HhCCC
Confidence 44455554 6789999999999999999988 667999997653210 10 0111111111 111 1
Q ss_pred hhhhhcccccCCCCChHHHHHHHHH-hhc--CChHHHHHHHHHHhhhchHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHH
Q 045774 160 WVAGFVPMALGADVPDMALQEFSRT-LFS--MRPDIALHVARTAFAADLRHVLGLVRVPVCIIQSSVDLSVPPAVAEYMR 236 (275)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~d~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~ 236 (275)
|... ...|... +.. ..+. ...+. ...|.-.-..++++|.++|.|++|..+.++....+.
T Consensus 224 ws~a--------------~~dY~~~gi~~~l~tp~-f~~L~---~ivDP~~Y~~rL~~PK~ii~atgDeFf~pD~~~~y~ 285 (367)
T PF10142_consen 224 WSFA--------------FQDYYNEGITQQLDTPE-FDKLM---QIVDPYSYRDRLTMPKYIINATGDEFFVPDSSNFYY 285 (367)
T ss_pred Cccc--------------hhhhhHhCchhhcCCHH-HHHHH---HhcCHHHHHHhcCccEEEEecCCCceeccCchHHHH
Confidence 1111 1111111 100 0111 11111 112333333566999999999999999999888888
Q ss_pred HHcCCCccEEEcCCCCCCCCCCChHHHHHHHHHHHHh
Q 045774 237 RHLGGPTVLEFLPTHGHLPHVSSPAPVANAIQQLLRR 273 (275)
Q Consensus 237 ~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 273 (275)
..+|+.+.+..+||++|..-. ..+.+.|..|+..
T Consensus 286 d~L~G~K~lr~vPN~~H~~~~---~~~~~~l~~f~~~ 319 (367)
T PF10142_consen 286 DKLPGEKYLRYVPNAGHSLIG---SDVVQSLRAFYNR 319 (367)
T ss_pred hhCCCCeeEEeCCCCCcccch---HHHHHHHHHHHHH
Confidence 999987789999999997766 6666778788765
No 148
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=98.23 E-value=5.1e-05 Score=64.09 Aligned_cols=69 Identities=22% Similarity=0.129 Sum_probs=42.9
Q ss_pred HHHhhcCCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhCC---CceEEEEeChhHHHHHHHHHh
Q 045774 44 IPSFTRAYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALEI---DRCAFVGHSVSAMIGLLAAIH 114 (275)
Q Consensus 44 ~~~l~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~---~~~~lvGhS~GG~val~~a~~ 114 (275)
...|+.+|-|++.|..|.|.. ..... ..-++.-|.++...++...+++ .++.+.|||=||.-++..|..
T Consensus 20 ~~~L~~GyaVv~pDY~Glg~~-y~~~~-~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA~l 91 (290)
T PF03583_consen 20 AAWLARGYAVVAPDYEGLGTP-YLNGR-SEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAAEL 91 (290)
T ss_pred HHHHHCCCEEEecCCCCCCCc-ccCcH-hHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHHHH
Confidence 346777999999999999972 11111 1112233444444444433343 479999999999998765533
No 149
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.22 E-value=2e-06 Score=71.06 Aligned_cols=104 Identities=16% Similarity=0.203 Sum_probs=63.9
Q ss_pred ceEEEEcCCCCChhhhh--hhHHHhhcC-----CEEEEEccCCCCCCC-----------CCCCCcccccchhHHHHHHHH
Q 045774 25 SIIVFSHGFGSDQSVWS--RVIPSFTRA-----YRVISFDLMCSGSCD-----------PTNYDFQRYATLDGYVDDLLS 86 (275)
Q Consensus 25 ~~ivllHG~~~~~~~w~--~~~~~l~~~-----~~via~Dl~G~G~S~-----------~~~~~~~~~~~~~~~a~dl~~ 86 (275)
|+|+++||.......|. ..++.+... .-||+++..+.+... ..........-...++++|..
T Consensus 25 PvlylldG~~~~~~~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~el~p 104 (251)
T PF00756_consen 25 PVLYLLDGQSGWFRNGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGSSRRADDSGGGDAYETFLTEELIP 104 (251)
T ss_dssp EEEEEESHTTHHHHHHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCTTCBCTSTTTHHHHHHHHHTHHHH
T ss_pred EEEEEccCCccccccchHHHHHHHHHHhCCCCceEEEEEecccccccccccccccccccccccCCCCcccceehhccchh
Confidence 68999999722222222 222222221 346777766655110 000000001113456678888
Q ss_pred HHHHh-CCC--ceEEEEeChhHHHHHHHHHhCCccccceeeecCC
Q 045774 87 FLDAL-EID--RCAFVGHSVSAMIGLLAAIHRPNLFSRLILIGGS 128 (275)
Q Consensus 87 ~l~~l-~~~--~~~lvGhS~GG~val~~a~~~p~~v~~lvli~~~ 128 (275)
.+++. ... +..+.|+||||..|+.++.++|+.+.+++.+++.
T Consensus 105 ~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~ 149 (251)
T PF00756_consen 105 YIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGA 149 (251)
T ss_dssp HHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEE
T ss_pred HHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCcc
Confidence 88755 332 2699999999999999999999999999998753
No 150
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=98.12 E-value=1.7e-05 Score=67.94 Aligned_cols=101 Identities=18% Similarity=0.197 Sum_probs=54.9
Q ss_pred ceEEEEcCCCCChhh--------------hh----hhHHHhhc-CCEEEEEccCCCCCCCCCCC-Cc-cc--ccchhHH-
Q 045774 25 SIIVFSHGFGSDQSV--------------WS----RVIPSFTR-AYRVISFDLMCSGSCDPTNY-DF-QR--YATLDGY- 80 (275)
Q Consensus 25 ~~ivllHG~~~~~~~--------------w~----~~~~~l~~-~~~via~Dl~G~G~S~~~~~-~~-~~--~~~~~~~- 80 (275)
|.||++||-+...+. |+ .+...|++ +|-|+++|.+|+|....... .. .. +.++..+
T Consensus 116 PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la~~~ 195 (390)
T PF12715_consen 116 PAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVLAPDALGFGERGDMEGAAQGSNYDCQALARNL 195 (390)
T ss_dssp EEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHHHHHH
T ss_pred CEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCEEEEEccccccccccccccccccchhHHHHHHHH
Confidence 579999997665432 11 12345655 79999999999997643111 11 11 1112111
Q ss_pred -----------HHHHHHHHHHh------CCCceEEEEeChhHHHHHHHHHhCCccccceeeec
Q 045774 81 -----------VDDLLSFLDAL------EIDRCAFVGHSVSAMIGLLAAIHRPNLFSRLILIG 126 (275)
Q Consensus 81 -----------a~dl~~~l~~l------~~~~~~lvGhS~GG~val~~a~~~p~~v~~lvli~ 126 (275)
+-|....+|.| +.+++.++|+||||..++.+|+..+ ||+..|..+
T Consensus 196 l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaALDd-RIka~v~~~ 257 (390)
T PF12715_consen 196 LMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAALDD-RIKATVANG 257 (390)
T ss_dssp HHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH-T-T--EEEEES
T ss_pred HHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHcch-hhHhHhhhh
Confidence 11222344444 2357999999999999999998775 898887654
No 151
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.08 E-value=2.2e-05 Score=66.04 Aligned_cols=85 Identities=21% Similarity=0.233 Sum_probs=59.9
Q ss_pred CceEEEEcCCCCChhhh------hhhHHHhhc--CCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhC---
Q 045774 24 QSIIVFSHGFGSDQSVW------SRVIPSFTR--AYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALE--- 92 (275)
Q Consensus 24 ~~~ivllHG~~~~~~~w------~~~~~~l~~--~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~--- 92 (275)
+..||++-|+++.-+.- +..+..+++ +-+|+.+..||.|.|... .+.++++.|-.+.++.|.
T Consensus 137 ~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~-------~s~~dLv~~~~a~v~yL~d~~ 209 (365)
T PF05677_consen 137 QRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGP-------PSRKDLVKDYQACVRYLRDEE 209 (365)
T ss_pred CcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCC-------CCHHHHHHHHHHHHHHHHhcc
Confidence 35899999987665441 112223333 579999999999999632 135778888777776662
Q ss_pred --C--CceEEEEeChhHHHHHHHHHhC
Q 045774 93 --I--DRCAFVGHSVSAMIGLLAAIHR 115 (275)
Q Consensus 93 --~--~~~~lvGhS~GG~val~~a~~~ 115 (275)
. +++++-|||+||.|+.++..++
T Consensus 210 ~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 210 QGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred cCCChheEEEeeccccHHHHHHHHHhc
Confidence 2 5699999999999988865544
No 152
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.06 E-value=1.8e-05 Score=72.66 Aligned_cols=89 Identities=10% Similarity=0.090 Sum_probs=52.1
Q ss_pred eEEEEcCCCCChhhhhhhHHHhh-----------------cCCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHH
Q 045774 26 IIVFSHGFGSDQSVWSRVIPSFT-----------------RAYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFL 88 (275)
Q Consensus 26 ~ivllHG~~~~~~~w~~~~~~l~-----------------~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l 88 (275)
||+|++|+.+|-.-=+.++..-+ .+|+-.++|+-+- .......++.++++-+.+.+
T Consensus 91 PVLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe-------~tAm~G~~l~dQtEYV~dAI 163 (973)
T KOG3724|consen 91 PVLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEE-------FTAMHGHILLDQTEYVNDAI 163 (973)
T ss_pred eEEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccch-------hhhhccHhHHHHHHHHHHHH
Confidence 79999998776544444333222 1356666665421 11122235777777666655
Q ss_pred HHh-----C--------CCceEEEEeChhHHHHHHHHHhCCccccce
Q 045774 89 DAL-----E--------IDRCAFVGHSVSAMIGLLAAIHRPNLFSRL 122 (275)
Q Consensus 89 ~~l-----~--------~~~~~lvGhS~GG~val~~a~~~p~~v~~l 122 (275)
+.. + ...+++|||||||+||..++ .+|+.+++.
T Consensus 164 k~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~-tlkn~~~~s 209 (973)
T KOG3724|consen 164 KYILSLYRGEREYASPLPHSVILVGHSMGGIVARATL-TLKNEVQGS 209 (973)
T ss_pred HHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHH-hhhhhccch
Confidence 422 2 12399999999999987654 455444443
No 153
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=98.03 E-value=2e-05 Score=70.62 Aligned_cols=120 Identities=17% Similarity=0.257 Sum_probs=73.6
Q ss_pred hhHhhhhceEE--ecCCCceEEEEcCCCCChhhh--hhhHHHhhc--CCEEEEEccCCCCCCCCCC---CCcccccchhH
Q 045774 9 EFLLEALNVRV--VGQGQSIIVFSHGFGSDQSVW--SRVIPSFTR--AYRVISFDLMCSGSCDPTN---YDFQRYATLDG 79 (275)
Q Consensus 9 ~~~~~~~~~~~--~g~g~~~ivllHG~~~~~~~w--~~~~~~l~~--~~~via~Dl~G~G~S~~~~---~~~~~~~~~~~ 79 (275)
.+|--|..+.. +..|.|++|++-|=+.-...| ..++-.|++ +--|+++..|-+|.|.|.. .+-.+|-|.+.
T Consensus 12 ~tf~qRY~~n~~~~~~~gpifl~~ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~Q 91 (434)
T PF05577_consen 12 GTFSQRYWVNDQYYKPGGPIFLYIGGEGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQ 91 (434)
T ss_dssp -EEEEEEEEE-TT--TTSEEEEEE--SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHH
T ss_pred CeEEEEEEEEhhhcCCCCCEEEEECCCCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHH
Confidence 44445555543 234456777776644333323 224456666 4689999999999997621 11234678999
Q ss_pred HHHHHHHHHHHhC--C-----CceEEEEeChhHHHHHHHHHhCCccccceeeecCC
Q 045774 80 YVDDLLSFLDALE--I-----DRCAFVGHSVSAMIGLLAAIHRPNLFSRLILIGGS 128 (275)
Q Consensus 80 ~a~dl~~~l~~l~--~-----~~~~lvGhS~GG~val~~a~~~p~~v~~lvli~~~ 128 (275)
-.+|+..+++.+. . .+++++|-|+||++|.-+-.+||+.|.+.+.-+++
T Consensus 92 ALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSap 147 (434)
T PF05577_consen 92 ALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAP 147 (434)
T ss_dssp HHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--
T ss_pred HHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccce
Confidence 9999999988663 1 26999999999999999999999999998876553
No 154
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=98.03 E-value=2.5e-05 Score=55.21 Aligned_cols=61 Identities=21% Similarity=0.211 Sum_probs=54.0
Q ss_pred CCCcEEEEEeCCCCCCCHHHHHHHHHHcCCCccEEEcCCCCCCCCCCChHHHHHHHHHHHHh
Q 045774 212 VRVPVCIIQSSVDLSVPPAVAEYMRRHLGGPTVLEFLPTHGHLPHVSSPAPVANAIQQLLRR 273 (275)
Q Consensus 212 i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 273 (275)
...|+|+|.++.|.+.|.+.++.+++.+++ +.++++++.||......-.-+.+++.+||..
T Consensus 33 ~~~piL~l~~~~Dp~TP~~~a~~~~~~l~~-s~lvt~~g~gHg~~~~~s~C~~~~v~~yl~~ 93 (103)
T PF08386_consen 33 GAPPILVLGGTHDPVTPYEGARAMAARLPG-SRLVTVDGAGHGVYAGGSPCVDKAVDDYLLD 93 (103)
T ss_pred CCCCEEEEecCcCCCCcHHHHHHHHHHCCC-ceEEEEeccCcceecCCChHHHHHHHHHHHc
Confidence 359999999999999999999999999998 5888899999999975557788999999863
No 155
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=98.01 E-value=0.00019 Score=56.83 Aligned_cols=161 Identities=16% Similarity=0.180 Sum_probs=96.0
Q ss_pred eEEEEcC-CCCChhhhhhhHHHhhc-CCEEEEEccCCC-CCCCCCCCCc-----ccccchhHHHHHHHHHH---HHhC-C
Q 045774 26 IIVFSHG-FGSDQSVWSRVIPSFTR-AYRVISFDLMCS-GSCDPTNYDF-----QRYATLDGYVDDLLSFL---DALE-I 93 (275)
Q Consensus 26 ~ivllHG-~~~~~~~w~~~~~~l~~-~~~via~Dl~G~-G~S~~~~~~~-----~~~~~~~~~a~dl~~~l---~~l~-~ 93 (275)
.||++-- ||.+...-+..++.++. +|.|+.+|+-.= =.| ++.... .+..+.+..-+++..++ +..+ .
T Consensus 41 ~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~-~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~g~~ 119 (242)
T KOG3043|consen 41 VLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFRGDPWS-PSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNHGDS 119 (242)
T ss_pred EEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhcCCCCC-CCCChhhhHHHHhcCCcccchhHHHHHHHHHHHcCCc
Confidence 5666655 34444546667777765 799999998632 111 010000 00012222333344433 3445 5
Q ss_pred CceEEEEeChhHHHHHHHHHhCCccccceeeecCCCCCcCCCCCcCCCCcchHHHHHHHHhhhhhhhhhhhcccccCCCC
Q 045774 94 DRCAFVGHSVSAMIGLLAAIHRPNLFSRLILIGGSPRFTNDGNYIGGIDPAHMEEVFRRMESNYESWVAGFVPMALGADV 173 (275)
Q Consensus 94 ~~~~lvGhS~GG~val~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (275)
+++-++|..|||.++..+....| ++.+.+..-++..
T Consensus 120 kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~~hps~~------------------------------------------- 155 (242)
T KOG3043|consen 120 KKIGVVGFCWGAKVVVTLSAKDP-EFDAGVSFHPSFV------------------------------------------- 155 (242)
T ss_pred ceeeEEEEeecceEEEEeeccch-hheeeeEecCCcC-------------------------------------------
Confidence 67999999999999866655555 4444444321110
Q ss_pred ChHHHHHHHHHhhcCChHHHHHHHHHHhhhchHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHHcCCC----ccEEEcC
Q 045774 174 PDMALQEFSRTLFSMRPDIALHVARTAFAADLRHVLGLVRVPVCIIQSSVDLSVPPAVAEYMRRHLGGP----TVLEFLP 249 (275)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~----~~~~~i~ 249 (275)
| .+...++++|+++++++.|..+|++......+.+... .++++++
T Consensus 156 ------------------------------d-~~D~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~ 204 (242)
T KOG3043|consen 156 ------------------------------D-SADIANVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFS 204 (242)
T ss_pred ------------------------------C-hhHHhcCCCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcC
Confidence 0 1113356899999999999999998777666655432 2589999
Q ss_pred CCCCCCC-----CCChHH
Q 045774 250 THGHLPH-----VSSPAP 262 (275)
Q Consensus 250 ~~gH~~~-----~e~p~~ 262 (275)
+-+|.-. .+.|+.
T Consensus 205 g~~HGf~~~r~~~~~Ped 222 (242)
T KOG3043|consen 205 GVGHGFVARRANISSPED 222 (242)
T ss_pred CccchhhhhccCCCChhH
Confidence 9999755 455543
No 156
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=97.99 E-value=0.00022 Score=64.01 Aligned_cols=159 Identities=17% Similarity=0.212 Sum_probs=98.6
Q ss_pred CceEEEEcCCC----CCh--hhhhhhHHHhhcCCEEEEEccC-CCCCCCCCCCCcccccchhHHHHHHHHHHH-------
Q 045774 24 QSIIVFSHGFG----SDQ--SVWSRVIPSFTRAYRVISFDLM-CSGSCDPTNYDFQRYATLDGYVDDLLSFLD------- 89 (275)
Q Consensus 24 ~~~ivllHG~~----~~~--~~w~~~~~~l~~~~~via~Dl~-G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~------- 89 (275)
.|.++++||.+ .+. ..|........+--.|-++|++ +.|.- ++..-++-+..+..
T Consensus 176 spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n~igG~-----------nI~h~ae~~vSf~r~kvlei~ 244 (784)
T KOG3253|consen 176 SPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNNPIGGA-----------NIKHAAEYSVSFDRYKVLEIT 244 (784)
T ss_pred CceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccCCCCCc-----------chHHHHHHHHHHhhhhhhhhh
Confidence 35789999977 222 3444555555555678888887 33321 23344444444333
Q ss_pred -HhCCCceEEEEeChhHHHHHHHHHhCC-ccccceeeecCCCCCcCCCCCcCCCCcchHHHHHHHHhhhhhhhhhhhccc
Q 045774 90 -ALEIDRCAFVGHSVSAMIGLLAAIHRP-NLFSRLILIGGSPRFTNDGNYIGGIDPAHMEEVFRRMESNYESWVAGFVPM 167 (275)
Q Consensus 90 -~l~~~~~~lvGhS~GG~val~~a~~~p-~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (275)
++...+++|+|.|||+.|+.....-.- .-|.++|.|+=.- ... ... +
T Consensus 245 gefpha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl---~~v------dgp-------------r--------- 293 (784)
T KOG3253|consen 245 GEFPHAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPL---DTV------DGP-------------R--------- 293 (784)
T ss_pred ccCCCCceEEEecccCceeeEEeccccCCceEEEEEEecccc---cCC------Ccc-------------c---------
Confidence 334568999999999888766543222 2366666653110 000 000 0
Q ss_pred ccCCCCChHHHHHHHHHhhcCChHHHHHHHHHHhhhchHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHHcCCCccEEE
Q 045774 168 ALGADVPDMALQEFSRTLFSMRPDIALHVARTAFAADLRHVLGLVRVPVCIIQSSVDLSVPPAVAEYMRRHLGGPTVLEF 247 (275)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~ 247 (275)
.. + + +.+-.++.|+|+|.|.+|..+++...+.+++.+....++++
T Consensus 294 ----gi---------------r-D---------------E~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMqA~~elhV 338 (784)
T KOG3253|consen 294 ----GI---------------R-D---------------EALLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQAEVELHV 338 (784)
T ss_pred ----CC---------------c-c---------------hhhHhcCCceEEEecCCcccCCHHHHHHHHHHhhccceEEE
Confidence 00 0 0 01224689999999999999999999999988876568999
Q ss_pred cCCCCCCCCCCC
Q 045774 248 LPTHGHLPHVSS 259 (275)
Q Consensus 248 i~~~gH~~~~e~ 259 (275)
|.+++|.+-.-.
T Consensus 339 I~~adhsmaipk 350 (784)
T KOG3253|consen 339 IGGADHSMAIPK 350 (784)
T ss_pred ecCCCccccCCc
Confidence 999999876654
No 157
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.99 E-value=9.4e-05 Score=60.97 Aligned_cols=107 Identities=17% Similarity=0.198 Sum_probs=73.0
Q ss_pred CCCceEEEEcCCCCChhhhhhhH--HHhhc--CCEEEEEccC-------CCCCCC-CCCCCcccccchhHHHHHHHHHHH
Q 045774 22 QGQSIIVFSHGFGSDQSVWSRVI--PSFTR--AYRVISFDLM-------CSGSCD-PTNYDFQRYATLDGYVDDLLSFLD 89 (275)
Q Consensus 22 ~g~~~ivllHG~~~~~~~w~~~~--~~l~~--~~~via~Dl~-------G~G~S~-~~~~~~~~~~~~~~~a~dl~~~l~ 89 (275)
++.|.||.+||-..+..-..... +.|++ +|=|+.+|-- ++|.+- +.. ....-.....+++-+..++.
T Consensus 59 ~~apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p~~-~~~g~ddVgflr~lva~l~~ 137 (312)
T COG3509 59 SGAPLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFGPAD-RRRGVDDVGFLRALVAKLVN 137 (312)
T ss_pred CCCCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcCccccccCCCcccccCCccc-ccCCccHHHHHHHHHHHHHH
Confidence 35568999999988876555443 45554 5888888532 222221 110 01112234555666666666
Q ss_pred HhCCC--ceEEEEeChhHHHHHHHHHhCCccccceeeecCCC
Q 045774 90 ALEID--RCAFVGHSVSAMIGLLAAIHRPNLFSRLILIGGSP 129 (275)
Q Consensus 90 ~l~~~--~~~lvGhS~GG~val~~a~~~p~~v~~lvli~~~~ 129 (275)
+.+++ ++.+.|.|-||..+..++..+|+.+.++-.+++..
T Consensus 138 ~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 138 EYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred hcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 77777 79999999999999999999999999998887643
No 158
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.96 E-value=5.5e-05 Score=64.04 Aligned_cols=106 Identities=19% Similarity=0.254 Sum_probs=61.8
Q ss_pred CCCceEEEEcCCCCCh--hhhh--hhHHHhhcCCEEEEEccCCCCCCCCCCCCccc-ccchhHHHHHHHHHHHHhCCCce
Q 045774 22 QGQSIIVFSHGFGSDQ--SVWS--RVIPSFTRAYRVISFDLMCSGSCDPTNYDFQR-YATLDGYVDDLLSFLDALEIDRC 96 (275)
Q Consensus 22 ~g~~~ivllHG~~~~~--~~w~--~~~~~l~~~~~via~Dl~G~G~S~~~~~~~~~-~~~~~~~a~dl~~~l~~l~~~~~ 96 (275)
.++..+||+||+..+- ..++ .+..-.......+.+-||.-|.--.-+.|.+. -++-+.+..-+..+......+++
T Consensus 114 ~~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~~~I 193 (377)
T COG4782 114 SAKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPVKRI 193 (377)
T ss_pred CCCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCCceE
Confidence 3456899999986542 1121 22222333578999999988864211222211 11334444444444444467889
Q ss_pred EEEEeChhHHHHHHHHHh----C----CccccceeeecC
Q 045774 97 AFVGHSVSAMIGLLAAIH----R----PNLFSRLILIGG 127 (275)
Q Consensus 97 ~lvGhS~GG~val~~a~~----~----p~~v~~lvli~~ 127 (275)
+|++||||..+.++...+ . |.+++-+|+.++
T Consensus 194 ~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaP 232 (377)
T COG4782 194 YLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAP 232 (377)
T ss_pred EEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCC
Confidence 999999999998765432 2 235666666543
No 159
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=97.96 E-value=3e-05 Score=68.26 Aligned_cols=78 Identities=18% Similarity=0.385 Sum_probs=54.3
Q ss_pred hhhhhHHHhhc-CCE------EEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHh---CCCceEEEEeChhHHHH
Q 045774 39 VWSRVIPSFTR-AYR------VISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDAL---EIDRCAFVGHSVSAMIG 108 (275)
Q Consensus 39 ~w~~~~~~l~~-~~~------via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l---~~~~~~lvGhS~GG~va 108 (275)
.|..+++.|.+ +|+ ..-+|+|=-= . ..+++...|.++++.. ..++++||||||||.++
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR~~~---------~---~~~~~~~~lk~~ie~~~~~~~~kv~li~HSmGgl~~ 133 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWRLSP---------A---ERDEYFTKLKQLIEEAYKKNGKKVVLIAHSMGGLVA 133 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechhhch---------h---hHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCchHH
Confidence 78999999876 442 2226776210 0 2345555666655533 46799999999999999
Q ss_pred HHHHHhCCc------cccceeeecCC
Q 045774 109 LLAAIHRPN------LFSRLILIGGS 128 (275)
Q Consensus 109 l~~a~~~p~------~v~~lvli~~~ 128 (275)
..+....++ .|+++|.++++
T Consensus 134 ~~fl~~~~~~~W~~~~i~~~i~i~~p 159 (389)
T PF02450_consen 134 RYFLQWMPQEEWKDKYIKRFISIGTP 159 (389)
T ss_pred HHHHHhccchhhHHhhhhEEEEeCCC
Confidence 998877753 59999999864
No 160
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=97.94 E-value=0.00019 Score=64.90 Aligned_cols=205 Identities=16% Similarity=0.161 Sum_probs=117.7
Q ss_pred ceEEEEcCCCC-----ChhhhhhhHH--Hhh-cCCEEEEEccCCCCCCCC--C--CCCcccccchhHHHHHHHHHHHHhC
Q 045774 25 SIIVFSHGFGS-----DQSVWSRVIP--SFT-RAYRVISFDLMCSGSCDP--T--NYDFQRYATLDGYVDDLLSFLDALE 92 (275)
Q Consensus 25 ~~ivllHG~~~-----~~~~w~~~~~--~l~-~~~~via~Dl~G~G~S~~--~--~~~~~~~~~~~~~a~dl~~~l~~l~ 92 (275)
|+++++-|-+. ++..|...+. .|+ .+|-|+++|-||.-.-.- . -........++|+++-+.-+.++.|
T Consensus 643 ptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~Laeq~g 722 (867)
T KOG2281|consen 643 PTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAEQTG 722 (867)
T ss_pred ceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHHHHhcC
Confidence 58899988664 3344444332 344 479999999999753311 0 0011223468999999999999885
Q ss_pred ---CCceEEEEeChhHHHHHHHHHhCCccccceeeecCCCCCcCCCCCcCCCCcchHHHHHHHHhhhhhhhhhhhccccc
Q 045774 93 ---IDRCAFVGHSVSAMIGLLAAIHRPNLFSRLILIGGSPRFTNDGNYIGGIDPAHMEEVFRRMESNYESWVAGFVPMAL 169 (275)
Q Consensus 93 ---~~~~~lvGhS~GG~val~~a~~~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (275)
.+++.+-|||+||++++....+||+-++..|. ++|. ..+..|-.+++ + +++..
T Consensus 723 fidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIA--GapV-T~W~~YDTgYT---------------E----RYMg~-- 778 (867)
T KOG2281|consen 723 FIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIA--GAPV-TDWRLYDTGYT---------------E----RYMGY-- 778 (867)
T ss_pred cccchheeEeccccccHHHHHHhhcCcceeeEEec--cCcc-eeeeeecccch---------------h----hhcCC--
Confidence 46899999999999999999999987776643 3321 11111111110 0 00000
Q ss_pred CCCCChHHHHHHHHHhhcCChHHHHHHHHHHhhhchHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHH-HHcCC--CccEE
Q 045774 170 GADVPDMALQEFSRTLFSMRPDIALHVARTAFAADLRHVLGLVRVPVCIIQSSVDLSVPPAVAEYMR-RHLGG--PTVLE 246 (275)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~-~~~~~--~~~~~ 246 (275)
.+.++. .+.. .... ...+.++.=+--.+++||--|.-+.-.....+. +.+.. ..++.
T Consensus 779 -P~~nE~---gY~a-------gSV~---------~~VeklpdepnRLlLvHGliDENVHF~Hts~Lvs~lvkagKpyeL~ 838 (867)
T KOG2281|consen 779 -PDNNEH---GYGA-------GSVA---------GHVEKLPDEPNRLLLVHGLIDENVHFAHTSRLVSALVKAGKPYELQ 838 (867)
T ss_pred -Cccchh---cccc-------hhHH---------HHHhhCCCCCceEEEEecccccchhhhhHHHHHHHHHhCCCceEEE
Confidence 000000 0000 0000 011123333455899999999877654444443 33332 24789
Q ss_pred EcCCCCCCCCCCCh-HHHHHHHHHHHHh
Q 045774 247 FLPTHGHLPHVSSP-APVANAIQQLLRR 273 (275)
Q Consensus 247 ~i~~~gH~~~~e~p-~~~~~~i~~fl~~ 273 (275)
++|+--|.+=.-+. +-....+..|+.+
T Consensus 839 IfP~ERHsiR~~es~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 839 IFPNERHSIRNPESGIYYEARLLHFLQE 866 (867)
T ss_pred EccccccccCCCccchhHHHHHHHHHhh
Confidence 99999998754333 3455667777754
No 161
>COG3150 Predicted esterase [General function prediction only]
Probab=97.82 E-value=0.00015 Score=54.66 Aligned_cols=83 Identities=17% Similarity=0.222 Sum_probs=60.9
Q ss_pred EEEEcCCCCChhhhhhhHH--HhhcCCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhCCCceEEEEeChh
Q 045774 27 IVFSHGFGSDQSVWSRVIP--SFTRAYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALEIDRCAFVGHSVS 104 (275)
Q Consensus 27 ivllHG~~~~~~~w~~~~~--~l~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~G 104 (275)
||.+|||.+|+.+.+.+.. .+....+-+.+ |.|-. ..+....++.+..++.+++.+...+||-|+|
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~~~~~~~i~y-------~~p~l-----~h~p~~a~~ele~~i~~~~~~~p~ivGssLG 69 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFIDEDVRDIEY-------STPHL-----PHDPQQALKELEKAVQELGDESPLIVGSSLG 69 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHHhccccceee-------ecCCC-----CCCHHHHHHHHHHHHHHcCCCCceEEeecch
Confidence 7999999999988877542 34443443333 33211 1247888999999999999888999999999
Q ss_pred HHHHHHHHHhCCcccccee
Q 045774 105 AMIGLLAAIHRPNLFSRLI 123 (275)
Q Consensus 105 G~val~~a~~~p~~v~~lv 123 (275)
|+.|..++.++- +++++
T Consensus 70 GY~At~l~~~~G--irav~ 86 (191)
T COG3150 70 GYYATWLGFLCG--IRAVV 86 (191)
T ss_pred HHHHHHHHHHhC--Chhhh
Confidence 999999988763 44444
No 162
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=97.75 E-value=0.00035 Score=59.54 Aligned_cols=102 Identities=13% Similarity=0.203 Sum_probs=64.2
Q ss_pred eEEEEcCCCCChhh---hhhhHHHhhc-CCEEEEEccCC--CCCC------------CCCC-CCcc--------------
Q 045774 26 IIVFSHGFGSDQSV---WSRVIPSFTR-AYRVISFDLMC--SGSC------------DPTN-YDFQ-------------- 72 (275)
Q Consensus 26 ~ivllHG~~~~~~~---w~~~~~~l~~-~~~via~Dl~G--~G~S------------~~~~-~~~~-------------- 72 (275)
.||+|||++.++++ -.++-..|.+ +|..+++-+|. -..+ .... ....
T Consensus 89 ~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 168 (310)
T PF12048_consen 89 AVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVPSAGDQQLSQPSDEPSPASAQEAEA 168 (310)
T ss_pred EEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCCCCCCCCcCCCCCCCccccccHhHH
Confidence 79999999988762 2334445555 79999998887 1100 0000 0000
Q ss_pred --cc-cchhHHHHHHHHHHHHhCCCceEEEEeChhHHHHHHHHHhCCc-cccceeeecC
Q 045774 73 --RY-ATLDGYVDDLLSFLDALEIDRCAFVGHSVSAMIGLLAAIHRPN-LFSRLILIGG 127 (275)
Q Consensus 73 --~~-~~~~~~a~dl~~~l~~l~~~~~~lvGhS~GG~val~~a~~~p~-~v~~lvli~~ 127 (275)
.+ ..+....+.+.+++.+.+.++++||||+.|+..++.+....+. .+.++|+|++
T Consensus 169 ~~~~~~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a 227 (310)
T PF12048_consen 169 REAYEERLFARIEAAIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINA 227 (310)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeC
Confidence 00 0122222333444445566779999999999999998877764 5899999986
No 163
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=97.74 E-value=0.0004 Score=57.66 Aligned_cols=42 Identities=24% Similarity=0.537 Sum_probs=35.9
Q ss_pred CCceEEEEcCCCCChhhhhhhHHHhhc-CCEEEEEccCCCCCC
Q 045774 23 GQSIIVFSHGFGSDQSVWSRVIPSFTR-AYRVISFDLMCSGSC 64 (275)
Q Consensus 23 g~~~ivllHG~~~~~~~w~~~~~~l~~-~~~via~Dl~G~G~S 64 (275)
+=|.|||.||++++...|..+...|+. +|=|.|+..|.+-.+
T Consensus 117 k~PvvvFSHGLggsRt~YSa~c~~LAShG~VVaavEHRD~SA~ 159 (399)
T KOG3847|consen 117 KYPVVVFSHGLGGSRTLYSAYCTSLASHGFVVAAVEHRDRSAC 159 (399)
T ss_pred CccEEEEecccccchhhHHHHhhhHhhCceEEEEeecccCcce
Confidence 447899999999999999999988876 688999999877644
No 164
>PLN02606 palmitoyl-protein thioesterase
Probab=97.72 E-value=0.00032 Score=58.60 Aligned_cols=97 Identities=15% Similarity=0.200 Sum_probs=66.1
Q ss_pred ceEEEEcCCC--CChhhhhhhHHHhh--cCCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhC--CCceEE
Q 045774 25 SIIVFSHGFG--SDQSVWSRVIPSFT--RAYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALE--IDRCAF 98 (275)
Q Consensus 25 ~~ivllHG~~--~~~~~w~~~~~~l~--~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~--~~~~~l 98 (275)
.|||+.||.+ ++...+..+.+.+. .++.+..+- .|-|..+ .-...+.++++.+++.+.... -+.+++
T Consensus 27 ~PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~-ig~~~~~------s~~~~~~~Qv~~vce~l~~~~~L~~G~na 99 (306)
T PLN02606 27 VPFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVE-IGNGVQD------SLFMPLRQQASIACEKIKQMKELSEGYNI 99 (306)
T ss_pred CCEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEE-ECCCccc------ccccCHHHHHHHHHHHHhcchhhcCceEE
Confidence 4799999999 66678888887775 245444444 2322211 011245666666666555421 136999
Q ss_pred EEeChhHHHHHHHHHhCCc--cccceeeecCC
Q 045774 99 VGHSVSAMIGLLAAIHRPN--LFSRLILIGGS 128 (275)
Q Consensus 99 vGhS~GG~val~~a~~~p~--~v~~lvli~~~ 128 (275)
||+|=||.++-.++.+.|+ .|+.+|.+++.
T Consensus 100 IGfSQGglflRa~ierc~~~p~V~nlISlggp 131 (306)
T PLN02606 100 VAESQGNLVARGLIEFCDNAPPVINYVSLGGP 131 (306)
T ss_pred EEEcchhHHHHHHHHHCCCCCCcceEEEecCC
Confidence 9999999999999999988 49999999864
No 165
>COG4099 Predicted peptidase [General function prediction only]
Probab=97.68 E-value=0.0003 Score=57.98 Aligned_cols=41 Identities=24% Similarity=0.342 Sum_probs=35.3
Q ss_pred HHHHhCCC--ceEEEEeChhHHHHHHHHHhCCccccceeeecC
Q 045774 87 FLDALEID--RCAFVGHSVSAMIGLLAAIHRPNLFSRLILIGG 127 (275)
Q Consensus 87 ~l~~l~~~--~~~lvGhS~GG~val~~a~~~p~~v~~lvli~~ 127 (275)
+.++.+++ ++.++|.|+||+-++.++.++|+.+++.+++++
T Consensus 260 las~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG 302 (387)
T COG4099 260 LASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAG 302 (387)
T ss_pred HhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecC
Confidence 33455654 699999999999999999999999999999875
No 166
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=97.68 E-value=0.0012 Score=55.30 Aligned_cols=70 Identities=24% Similarity=0.352 Sum_probs=52.2
Q ss_pred chHhhhCCCC-CcEEEEEeCCCCCCCHHHHHHHHHHcCC-CccEEEcCCCCCCCCCCChH---HHHHHHHHHHHh
Q 045774 204 DLRHVLGLVR-VPVCIIQSSVDLSVPPAVAEYMRRHLGG-PTVLEFLPTHGHLPHVSSPA---PVANAIQQLLRR 273 (275)
Q Consensus 204 d~~~~l~~i~-~P~l~i~G~~D~~~~~~~~~~~~~~~~~-~~~~~~i~~~gH~~~~e~p~---~~~~~i~~fl~~ 273 (275)
+....+..+. +|+++++|.+|..+|...++.+.+.... ..+..++++++|......+. +-.+.+.+|+.+
T Consensus 222 d~~~~~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~ 296 (299)
T COG1073 222 DPFDDAEKISPRPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLER 296 (299)
T ss_pred cchhhHhhcCCcceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCccHHHHHHHHHHHHHHHH
Confidence 3444444555 8999999999999999888877776665 45677788999998865554 566777777765
No 167
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.65 E-value=0.0001 Score=56.12 Aligned_cols=52 Identities=17% Similarity=0.235 Sum_probs=37.4
Q ss_pred hhHHHHHHHHHHHHh----CCCceEEEEeChhHHHHHHHHHhCCc----cccceeeecCC
Q 045774 77 LDGYVDDLLSFLDAL----EIDRCAFVGHSVSAMIGLLAAIHRPN----LFSRLILIGGS 128 (275)
Q Consensus 77 ~~~~a~dl~~~l~~l----~~~~~~lvGhS~GG~val~~a~~~p~----~v~~lvli~~~ 128 (275)
+....+.+...+++. ...+++++|||+||.+|..++...+. +...++..+++
T Consensus 7 ~~~~~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p 66 (153)
T cd00741 7 ARSLANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPP 66 (153)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCC
Confidence 445555555555544 46789999999999999998887765 45666666654
No 168
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.61 E-value=0.00027 Score=60.77 Aligned_cols=108 Identities=15% Similarity=0.171 Sum_probs=74.7
Q ss_pred ecCCCceEEEEcCCCCChhhhhh---hHHHhhc--CCEEEEEccCCCCCCCCC-CC-----CcccccchhHHHHHHHHHH
Q 045774 20 VGQGQSIIVFSHGFGSDQSVWSR---VIPSFTR--AYRVISFDLMCSGSCDPT-NY-----DFQRYATLDGYVDDLLSFL 88 (275)
Q Consensus 20 ~g~g~~~ivllHG~~~~~~~w~~---~~~~l~~--~~~via~Dl~G~G~S~~~-~~-----~~~~~~~~~~~a~dl~~~l 88 (275)
++.|+.||+|--|.=++-++|.. ++-.++. +--+|....|=+|+|-|- .. ..-.|-|-+.-.+|.++++
T Consensus 76 w~~g~gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll 155 (492)
T KOG2183|consen 76 WKKGEGPIFFYTGNEGDIEWFANNTGFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELL 155 (492)
T ss_pred ccCCCCceEEEeCCcccHHHHHhccchHHhhhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHH
Confidence 34443479999999887776654 3333444 346899999999999651 11 1112445555566666666
Q ss_pred HHhCC------CceEEEEeChhHHHHHHHHHhCCccccceeeecC
Q 045774 89 DALEI------DRCAFVGHSVSAMIGLLAAIHRPNLFSRLILIGG 127 (275)
Q Consensus 89 ~~l~~------~~~~lvGhS~GG~val~~a~~~p~~v~~lvli~~ 127 (275)
..|.- .+++.+|-|+|||+|.-+=.+||..|.+.+..++
T Consensus 156 ~~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSA 200 (492)
T KOG2183|consen 156 TFLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASA 200 (492)
T ss_pred HHHhhccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccC
Confidence 66632 3799999999999999999999999988865443
No 169
>COG0627 Predicted esterase [General function prediction only]
Probab=97.60 E-value=0.00023 Score=60.53 Aligned_cols=103 Identities=17% Similarity=0.263 Sum_probs=63.2
Q ss_pred ceEEEEcCCCCChhhhhhh--HHHhhc--CCEEEEEcc--------------CCCCCCCCCCCCcc-----cccchhH-H
Q 045774 25 SIIVFSHGFGSDQSVWSRV--IPSFTR--AYRVISFDL--------------MCSGSCDPTNYDFQ-----RYATLDG-Y 80 (275)
Q Consensus 25 ~~ivllHG~~~~~~~w~~~--~~~l~~--~~~via~Dl--------------~G~G~S~~~~~~~~-----~~~~~~~-~ 80 (275)
|+++++||..++...|-.+ ++..++ ++-+++.|- .|-|.|=..+.... .| .+++ +
T Consensus 55 pV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~-q~~tfl 133 (316)
T COG0627 55 PVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPY-QWETFL 133 (316)
T ss_pred CEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCcc-chhHHH
Confidence 5789999998887555432 122222 355555532 24443311110010 12 2333 4
Q ss_pred HHHHHHHHHHhCC-----CceEEEEeChhHHHHHHHHHhCCccccceeeecCC
Q 045774 81 VDDLLSFLDALEI-----DRCAFVGHSVSAMIGLLAAIHRPNLFSRLILIGGS 128 (275)
Q Consensus 81 a~dl~~~l~~l~~-----~~~~lvGhS~GG~val~~a~~~p~~v~~lvli~~~ 128 (275)
.++|-+.+++... ++..++||||||.=|+.+|+++|++++.+...++.
T Consensus 134 ~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~ 186 (316)
T COG0627 134 TQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGI 186 (316)
T ss_pred HhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceecccccc
Confidence 5566655554432 27899999999999999999999999999877653
No 170
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.49 E-value=0.0023 Score=52.07 Aligned_cols=56 Identities=20% Similarity=0.297 Sum_probs=46.9
Q ss_pred EEEEEeCCCCCCCHHHHHHHHHHcCCCccEEEcCCCCCC-CCCCChHHHHHHHHHHHHh
Q 045774 216 VCIIQSSVDLSVPPAVAEYMRRHLGGPTVLEFLPTHGHL-PHVSSPAPVANAIQQLLRR 273 (275)
Q Consensus 216 ~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~-~~~e~p~~~~~~i~~fl~~ 273 (275)
+.++..++|..+|..-...+++..|+ .++..++ .||. ..+-+-+.+...|.+-|++
T Consensus 309 ~ivv~A~~D~Yipr~gv~~lQ~~WPg-~eVr~~e-gGHVsayl~k~dlfRR~I~d~L~R 365 (371)
T KOG1551|consen 309 IIVVQAKEDAYIPRTGVRSLQEIWPG-CEVRYLE-GGHVSAYLFKQDLFRRAIVDGLDR 365 (371)
T ss_pred EEEEEecCCccccccCcHHHHHhCCC-CEEEEee-cCceeeeehhchHHHHHHHHHHHh
Confidence 56778899999998878889999998 6898888 7997 4667778899999888765
No 171
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=97.47 E-value=0.00051 Score=62.60 Aligned_cols=101 Identities=21% Similarity=0.178 Sum_probs=58.8
Q ss_pred CceEEEEcCC----CCChhhhhhhHHHhh-c--CCEEEEEccC----CCCCCCCCCCCcccccchhHHHHH---HHHHHH
Q 045774 24 QSIIVFSHGF----GSDQSVWSRVIPSFT-R--AYRVISFDLM----CSGSCDPTNYDFQRYATLDGYVDD---LLSFLD 89 (275)
Q Consensus 24 ~~~ivllHG~----~~~~~~w~~~~~~l~-~--~~~via~Dl~----G~G~S~~~~~~~~~~~~~~~~a~d---l~~~l~ 89 (275)
.|+||++||- ++... + ....|. . ++-|++++.| |++.+.... ..... -+.|+... +.+-++
T Consensus 95 ~pv~v~ihGG~~~~g~~~~-~--~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~-~~~n~-g~~D~~~al~wv~~~i~ 169 (493)
T cd00312 95 LPVMVWIHGGGFMFGSGSL-Y--PGDGLAREGDNVIVVSINYRLGVLGFLSTGDIE-LPGNY-GLKDQRLALKWVQDNIA 169 (493)
T ss_pred CCEEEEEcCCccccCCCCC-C--ChHHHHhcCCCEEEEEecccccccccccCCCCC-CCcch-hHHHHHHHHHHHHHHHH
Confidence 3689999993 33222 2 122232 2 3788898988 443332110 01111 23343333 334444
Q ss_pred HhCC--CceEEEEeChhHHHHHHHHHh--CCccccceeeecCCC
Q 045774 90 ALEI--DRCAFVGHSVSAMIGLLAAIH--RPNLFSRLILIGGSP 129 (275)
Q Consensus 90 ~l~~--~~~~lvGhS~GG~val~~a~~--~p~~v~~lvli~~~~ 129 (275)
..|. ++++|.|+|.||..++.++.. .+..++++|+.++..
T Consensus 170 ~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~ 213 (493)
T cd00312 170 AFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSA 213 (493)
T ss_pred HhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCc
Confidence 5554 479999999999998877665 345789999887653
No 172
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.44 E-value=0.00033 Score=52.26 Aligned_cols=38 Identities=24% Similarity=0.302 Sum_probs=29.1
Q ss_pred hHHHHHHHHHHHHhCCCceEEEEeChhHHHHHHHHHhC
Q 045774 78 DGYVDDLLSFLDALEIDRCAFVGHSVSAMIGLLAAIHR 115 (275)
Q Consensus 78 ~~~a~dl~~~l~~l~~~~~~lvGhS~GG~val~~a~~~ 115 (275)
+...+.+.+++++....++++.|||+||.+|..++...
T Consensus 48 ~~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~l 85 (140)
T PF01764_consen 48 DQILDALKELVEKYPDYSIVITGHSLGGALASLAAADL 85 (140)
T ss_dssp HHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcccCccchhhccchHHHHHHHHHHhh
Confidence 35556666766666667899999999999998877653
No 173
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=97.41 E-value=0.046 Score=44.80 Aligned_cols=61 Identities=20% Similarity=0.212 Sum_probs=46.3
Q ss_pred CCCCcEEEEEeCCCCCCCHHHHHHHHHHcC--C-CccEEEcCCCCCCCCC-CChHHHHHHHHHHH
Q 045774 211 LVRVPVCIIQSSVDLSVPPAVAEYMRRHLG--G-PTVLEFLPTHGHLPHV-SSPAPVANAIQQLL 271 (275)
Q Consensus 211 ~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~--~-~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl 271 (275)
..++|-++|.++.|.+++.+..+++++... + ....+.+++++|..|+ ++|++-.+++.+|+
T Consensus 176 ~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 176 PSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred CCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 457999999999999999987776654332 1 1345667889998665 67899889888874
No 174
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=97.32 E-value=0.00055 Score=56.69 Aligned_cols=101 Identities=15% Similarity=0.206 Sum_probs=56.1
Q ss_pred ceEEEEcCCCCC---hhhhhhhHHHhhc---CCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhC-C-Cce
Q 045774 25 SIIVFSHGFGSD---QSVWSRVIPSFTR---AYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALE-I-DRC 96 (275)
Q Consensus 25 ~~ivllHG~~~~---~~~w~~~~~~l~~---~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~-~-~~~ 96 (275)
.|||+.||+|.+ +..+..+...+.+ +--|+++++ |-+.++.. ...-..++.++++.+.+.++... + +.+
T Consensus 6 ~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~i-g~~~~~D~--~~s~f~~v~~Qv~~vc~~l~~~p~L~~G~ 82 (279)
T PF02089_consen 6 LPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEI-GNDPSEDV--ENSFFGNVNDQVEQVCEQLANDPELANGF 82 (279)
T ss_dssp --EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--S-SSSHHHHH--HHHHHSHHHHHHHHHHHHHHH-GGGTT-E
T ss_pred CcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEE-CCCcchhh--hhhHHHHHHHHHHHHHHHHhhChhhhcce
Confidence 379999999864 3456655544443 567888875 33321100 00111346677777777666432 1 569
Q ss_pred EEEEeChhHHHHHHHHHhCCc-cccceeeecCC
Q 045774 97 AFVGHSVSAMIGLLAAIHRPN-LFSRLILIGGS 128 (275)
Q Consensus 97 ~lvGhS~GG~val~~a~~~p~-~v~~lvli~~~ 128 (275)
++||+|=||.+.-.++.+.|+ .|+.+|.+++.
T Consensus 83 ~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggp 115 (279)
T PF02089_consen 83 NAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGP 115 (279)
T ss_dssp EEEEETCHHHHHHHHHHH-TSS-EEEEEEES--
T ss_pred eeeeeccccHHHHHHHHHCCCCCceeEEEecCc
Confidence 999999999999888888875 69999999863
No 175
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=97.29 E-value=0.00063 Score=61.65 Aligned_cols=82 Identities=23% Similarity=0.275 Sum_probs=50.5
Q ss_pred hhhhhhHHHhhc-CC-----EEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHH---Hh-CCCceEEEEeChhHHH
Q 045774 38 SVWSRVIPSFTR-AY-----RVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLD---AL-EIDRCAFVGHSVSAMI 107 (275)
Q Consensus 38 ~~w~~~~~~l~~-~~-----~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~---~l-~~~~~~lvGhS~GG~v 107 (275)
..|..+++.|++ +| ....||+|=-. . .. ..-+.+-..+..+++ ++ +.++++||||||||.+
T Consensus 156 ~vw~kLIe~L~~iGY~~~nL~gAPYDWRls~-~---~l-----e~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv 226 (642)
T PLN02517 156 FVWAVLIANLARIGYEEKNMYMAAYDWRLSF-Q---NT-----EVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLY 226 (642)
T ss_pred eeHHHHHHHHHHcCCCCCceeecccccccCc-c---ch-----hhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHH
Confidence 367899998876 55 35556666111 0 00 012344344444444 23 4689999999999999
Q ss_pred HHHHHHhCC---------------ccccceeeecCC
Q 045774 108 GLLAAIHRP---------------NLFSRLILIGGS 128 (275)
Q Consensus 108 al~~a~~~p---------------~~v~~lvli~~~ 128 (275)
++++...-. ..|++.|.|+++
T Consensus 227 ~lyFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp 262 (642)
T PLN02517 227 FLHFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGP 262 (642)
T ss_pred HHHHHHhccccccccCCcchHHHHHHHHHheecccc
Confidence 998765321 247888888753
No 176
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=97.28 E-value=0.00037 Score=61.08 Aligned_cols=84 Identities=12% Similarity=0.203 Sum_probs=57.3
Q ss_pred hhhhhhHHHhhc-CCE------EEEEccCC-CCCCCCCCCCcccccchhHHHHHHHHHHHHhCCCceEEEEeChhHHHHH
Q 045774 38 SVWSRVIPSFTR-AYR------VISFDLMC-SGSCDPTNYDFQRYATLDGYVDDLLSFLDALEIDRCAFVGHSVSAMIGL 109 (275)
Q Consensus 38 ~~w~~~~~~l~~-~~~------via~Dl~G-~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~GG~val 109 (275)
..|..+++.|.. +|+ -..||+|= +-.|. ... ..+..+..-+....+.-|.++++||+|||||.+.+
T Consensus 124 ~~w~~~i~~lv~~GYe~~~~l~ga~YDwRls~~~~e----~rd--~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~l 197 (473)
T KOG2369|consen 124 WYWHELIENLVGIGYERGKTLFGAPYDWRLSYHNSE----ERD--QYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVL 197 (473)
T ss_pred HHHHHHHHHHHhhCcccCceeeccccchhhccCChh----HHH--HHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHH
Confidence 478889988866 554 55678773 22221 011 13555555555555555779999999999999999
Q ss_pred HHHHhCCc--------cccceeeecC
Q 045774 110 LAAIHRPN--------LFSRLILIGG 127 (275)
Q Consensus 110 ~~a~~~p~--------~v~~lvli~~ 127 (275)
.+...+++ .+++++-+++
T Consensus 198 yFl~w~~~~~~~W~~k~I~sfvnig~ 223 (473)
T KOG2369|consen 198 YFLKWVEAEGPAWCDKYIKSFVNIGA 223 (473)
T ss_pred HHHhcccccchhHHHHHHHHHHccCc
Confidence 99988887 3667766654
No 177
>PLN02633 palmitoyl protein thioesterase family protein
Probab=97.18 E-value=0.0028 Score=53.14 Aligned_cols=97 Identities=12% Similarity=0.124 Sum_probs=62.3
Q ss_pred ceEEEEcCCCCChh--hhhhhHHHhhc--CCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhC--CCceEE
Q 045774 25 SIIVFSHGFGSDQS--VWSRVIPSFTR--AYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALE--IDRCAF 98 (275)
Q Consensus 25 ~~ivllHG~~~~~~--~w~~~~~~l~~--~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~--~~~~~l 98 (275)
.|+|+-||.|.+-. ....+.+.+.+ +..++++-+ |.+... .-...+.++++.+++.+.... -+.+++
T Consensus 26 ~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i---g~~~~~----s~~~~~~~Qve~vce~l~~~~~l~~G~na 98 (314)
T PLN02633 26 VPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI---GNGVGD----SWLMPLTQQAEIACEKVKQMKELSQGYNI 98 (314)
T ss_pred CCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE---CCCccc----cceeCHHHHHHHHHHHHhhchhhhCcEEE
Confidence 47999999986532 33444444432 345555543 332111 111245666666666665421 136999
Q ss_pred EEeChhHHHHHHHHHhCCc--cccceeeecCC
Q 045774 99 VGHSVSAMIGLLAAIHRPN--LFSRLILIGGS 128 (275)
Q Consensus 99 vGhS~GG~val~~a~~~p~--~v~~lvli~~~ 128 (275)
||+|=||.++-.++.+.|+ .|+.+|.+++.
T Consensus 99 IGfSQGGlflRa~ierc~~~p~V~nlISlggp 130 (314)
T PLN02633 99 VGRSQGNLVARGLIEFCDGGPPVYNYISLAGP 130 (314)
T ss_pred EEEccchHHHHHHHHHCCCCCCcceEEEecCC
Confidence 9999999999999999987 59999999864
No 178
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=97.16 E-value=0.0026 Score=55.19 Aligned_cols=34 Identities=24% Similarity=0.264 Sum_probs=29.9
Q ss_pred ceEEEEeChhHHHHHHHHHhCCccccceeeecCC
Q 045774 95 RCAFVGHSVSAMIGLLAAIHRPNLFSRLILIGGS 128 (275)
Q Consensus 95 ~~~lvGhS~GG~val~~a~~~p~~v~~lvli~~~ 128 (275)
+++++|+|.||.+|..+|.-.|..+.+++=-++.
T Consensus 185 p~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~ 218 (403)
T PF11144_consen 185 PKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSY 218 (403)
T ss_pred cEEEEecCcHHHHHHHHHhhCccceeEEEecCcc
Confidence 7999999999999999999999999998654443
No 179
>KOG3101 consensus Esterase D [General function prediction only]
Probab=97.13 E-value=0.00044 Score=54.27 Aligned_cols=104 Identities=15% Similarity=0.232 Sum_probs=66.0
Q ss_pred ceEEEEcCCCCChhhhhhh--HHHhhc--CCEEEEEccCCCCCC-----CCC----------CCCccc----ccchhHHH
Q 045774 25 SIIVFSHGFGSDQSVWSRV--IPSFTR--AYRVISFDLMCSGSC-----DPT----------NYDFQR----YATLDGYV 81 (275)
Q Consensus 25 ~~ivllHG~~~~~~~w~~~--~~~l~~--~~~via~Dl~G~G~S-----~~~----------~~~~~~----~~~~~~~a 81 (275)
|++.++-|+.++.+.|-.- ....+. +.-|+++|-...|.- +.- +...+. |.-++-.+
T Consensus 45 P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYvnAt~epw~~~yrMYdYv~ 124 (283)
T KOG3101|consen 45 PVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYVNATQEPWAKHYRMYDYVV 124 (283)
T ss_pred ceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCceeEEecccchHhhhhhHHHHHH
Confidence 6899999999999877542 222222 578999998766522 100 000111 11122234
Q ss_pred HHHHHHHHH----hCCCceEEEEeChhHHHHHHHHHhCCccccceeeecCC
Q 045774 82 DDLLSFLDA----LEIDRCAFVGHSVSAMIGLLAAIHRPNLFSRLILIGGS 128 (275)
Q Consensus 82 ~dl~~~l~~----l~~~~~~lvGhS~GG~val~~a~~~p~~v~~lvli~~~ 128 (275)
++|-++++. ++..++.+.||||||.=|+-.+.+.|++.+++-..++.
T Consensus 125 kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI 175 (283)
T KOG3101|consen 125 KELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPI 175 (283)
T ss_pred HHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccc
Confidence 455555542 23346899999999999999999999998888666543
No 180
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=97.12 E-value=0.0054 Score=50.05 Aligned_cols=95 Identities=17% Similarity=0.215 Sum_probs=66.3
Q ss_pred ceEEEEcCCCCChhh--hhhhHHHhhc--CCEEEEEccCCCC--CCCCCCCCcccccchhHHHHHHHHHHHHhC--CCce
Q 045774 25 SIIVFSHGFGSDQSV--WSRVIPSFTR--AYRVISFDLMCSG--SCDPTNYDFQRYATLDGYVDDLLSFLDALE--IDRC 96 (275)
Q Consensus 25 ~~ivllHG~~~~~~~--w~~~~~~l~~--~~~via~Dl~G~G--~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~--~~~~ 96 (275)
-|+|++||++++... ...+.+.+.+ +..|+++|. |-| .|. ...+.++++.+.+.+.... -+.+
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~lei-g~g~~~s~--------l~pl~~Qv~~~ce~v~~m~~lsqGy 94 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEI-GDGIKDSS--------LMPLWEQVDVACEKVKQMPELSQGY 94 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEe-cCCcchhh--------hccHHHHHHHHHHHHhcchhccCce
Confidence 379999999877655 6666666665 578888884 444 221 1135667776666666332 2469
Q ss_pred EEEEeChhHHHHHHHHHhCCc-cccceeeecCC
Q 045774 97 AFVGHSVSAMIGLLAAIHRPN-LFSRLILIGGS 128 (275)
Q Consensus 97 ~lvGhS~GG~val~~a~~~p~-~v~~lvli~~~ 128 (275)
++||.|-||.++-.++..-|+ .|+.+|.+++.
T Consensus 95 nivg~SQGglv~Raliq~cd~ppV~n~ISL~gP 127 (296)
T KOG2541|consen 95 NIVGYSQGGLVARALIQFCDNPPVKNFISLGGP 127 (296)
T ss_pred EEEEEccccHHHHHHHHhCCCCCcceeEeccCC
Confidence 999999999999887776654 58888888753
No 181
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=97.11 E-value=0.01 Score=46.14 Aligned_cols=53 Identities=26% Similarity=0.283 Sum_probs=41.2
Q ss_pred hhHHHHHHHHHHHHhC-----CCceEEEEeChhHHHHHHHHHhCCccccceeeecCCC
Q 045774 77 LDGYVDDLLSFLDALE-----IDRCAFVGHSVSAMIGLLAAIHRPNLFSRLILIGGSP 129 (275)
Q Consensus 77 ~~~~a~dl~~~l~~l~-----~~~~~lvGhS~GG~val~~a~~~p~~v~~lvli~~~~ 129 (275)
-+.-+.+|..+++.|. ..+..++|||+|+.++-..+...+..+..+|+++++.
T Consensus 87 A~~ga~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG 144 (177)
T PF06259_consen 87 ARAGAPRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPG 144 (177)
T ss_pred HHHHHHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCC
Confidence 4566677777777663 2368999999999998887776678999999987643
No 182
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=97.08 E-value=0.0012 Score=53.51 Aligned_cols=44 Identities=18% Similarity=0.231 Sum_probs=33.0
Q ss_pred HHHHHHHhCCCceEEEEeChhHHHHHHHHHhC----CccccceeeecCC
Q 045774 84 LLSFLDALEIDRCAFVGHSVSAMIGLLAAIHR----PNLFSRLILIGGS 128 (275)
Q Consensus 84 l~~~l~~l~~~~~~lvGhS~GG~val~~a~~~----p~~v~~lvli~~~ 128 (275)
+..+++..+ +++.+.|||.||.+|.++|+.. .+||.+++..+++
T Consensus 75 l~~~~~~~~-~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgP 122 (224)
T PF11187_consen 75 LKKIAKKYP-GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGP 122 (224)
T ss_pred HHHHHHhCC-CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCC
Confidence 444444443 3599999999999999988874 4588898888864
No 183
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.07 E-value=0.0057 Score=45.96 Aligned_cols=81 Identities=17% Similarity=0.294 Sum_probs=55.0
Q ss_pred CCCceEEEEcCCCCChhhhhhhHHHhhcCC-EEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhCCCceEEEE
Q 045774 22 QGQSIIVFSHGFGSDQSVWSRVIPSFTRAY-RVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALEIDRCAFVG 100 (275)
Q Consensus 22 ~g~~~ivllHG~~~~~~~w~~~~~~l~~~~-~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvG 100 (275)
+|+..||..-||++.+.....++ +.+++ -++++|....-. +.| +.. .+.+-||+
T Consensus 9 qgd~LIvyFaGwgtpps~v~HLi--lpeN~dl~lcYDY~dl~l----dfD------fsA-------------y~hirlvA 63 (214)
T COG2830 9 QGDHLIVYFAGWGTPPSAVNHLI--LPENHDLLLCYDYQDLNL----DFD------FSA-------------YRHIRLVA 63 (214)
T ss_pred CCCEEEEEEecCCCCHHHHhhcc--CCCCCcEEEEeehhhcCc----ccc------hhh-------------hhhhhhhh
Confidence 45557888899999998777664 34555 477888765532 111 111 24567999
Q ss_pred eChhHHHHHHHHHhCCccccceeeecCCC
Q 045774 101 HSVSAMIGLLAAIHRPNLFSRLILIGGSP 129 (275)
Q Consensus 101 hS~GG~val~~a~~~p~~v~~lvli~~~~ 129 (275)
+|||-.||-+...-. +.++.+.|++..
T Consensus 64 wSMGVwvAeR~lqg~--~lksatAiNGTg 90 (214)
T COG2830 64 WSMGVWVAERVLQGI--RLKSATAINGTG 90 (214)
T ss_pred hhHHHHHHHHHHhhc--cccceeeecCCC
Confidence 999999998765433 678888887754
No 184
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=97.02 E-value=0.0048 Score=54.79 Aligned_cols=105 Identities=14% Similarity=0.125 Sum_probs=64.7
Q ss_pred CCceEEEEcCCCCChhhhhhhHHH-------------------hhcCCEEEEEccC-CCCCCCCCCCCcccccchhHHHH
Q 045774 23 GQSIIVFSHGFGSDQSVWSRVIPS-------------------FTRAYRVISFDLM-CSGSCDPTNYDFQRYATLDGYVD 82 (275)
Q Consensus 23 g~~~ivllHG~~~~~~~w~~~~~~-------------------l~~~~~via~Dl~-G~G~S~~~~~~~~~~~~~~~~a~ 82 (275)
..|.||++.|-++.+..|..+.+. +.+..+++-+|+| |.|.|...... ....+.++.|+
T Consensus 39 ~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~~an~l~iD~PvGtGfS~~~~~~-~~~~~~~~~a~ 117 (415)
T PF00450_consen 39 DDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWNKFANLLFIDQPVGTGFSYGNDPS-DYVWNDDQAAE 117 (415)
T ss_dssp SS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GGGTSEEEEE--STTSTT-EESSGG-GGS-SHHHHHH
T ss_pred CccEEEEecCCceeccccccccccCceEEeecccccccccccccccccceEEEeecCceEEeeccccc-cccchhhHHHH
Confidence 347899999977766666443211 2223689999977 99999532211 12346788888
Q ss_pred HHHHHHHHh-------CCCceEEEEeChhHHHHHHHHHh----C------CccccceeeecCC
Q 045774 83 DLLSFLDAL-------EIDRCAFVGHSVSAMIGLLAAIH----R------PNLFSRLILIGGS 128 (275)
Q Consensus 83 dl~~~l~~l-------~~~~~~lvGhS~GG~val~~a~~----~------p~~v~~lvli~~~ 128 (275)
++.++|... ...++.|.|-|+||.-+-.+|.+ . +=.++++++.++.
T Consensus 118 ~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~IGng~ 180 (415)
T PF00450_consen 118 DLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIAIGNGW 180 (415)
T ss_dssp HHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEEESE-
T ss_pred HHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccccccceecCcc
Confidence 888888754 34589999999999876544432 3 2347888887754
No 185
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=96.97 E-value=0.0014 Score=53.59 Aligned_cols=53 Identities=30% Similarity=0.486 Sum_probs=42.0
Q ss_pred hhHHHHHHHHHHHH-h--CCCceEEEEeChhHHHHHHHHHhCCccccceeeecCCC
Q 045774 77 LDGYVDDLLSFLDA-L--EIDRCAFVGHSVSAMIGLLAAIHRPNLFSRLILIGGSP 129 (275)
Q Consensus 77 ~~~~a~dl~~~l~~-l--~~~~~~lvGhS~GG~val~~a~~~p~~v~~lvli~~~~ 129 (275)
.+.+.+++.-++++ . +-++-.++|||+||.+++.....+|+.+....+++++-
T Consensus 117 ~~fL~~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSl 172 (264)
T COG2819 117 REFLTEQLKPFIEARYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSL 172 (264)
T ss_pred HHHHHHhhHHHHhcccccCcccceeeeecchhHHHHHHHhcCcchhceeeeecchh
Confidence 34455566666665 2 34568999999999999999999999999999987653
No 186
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=96.95 E-value=0.0025 Score=57.77 Aligned_cols=80 Identities=18% Similarity=0.212 Sum_probs=59.6
Q ss_pred hcCCEEEEEccCCCCCCCCCCCCcccccc-hhHHHHHHHHHHHHhC--CCceEEEEeChhHHHHHHHHHhCCccccceee
Q 045774 48 TRAYRVISFDLMCSGSCDPTNYDFQRYAT-LDGYVDDLLSFLDALE--IDRCAFVGHSVSAMIGLLAAIHRPNLFSRLIL 124 (275)
Q Consensus 48 ~~~~~via~Dl~G~G~S~~~~~~~~~~~~-~~~~a~dl~~~l~~l~--~~~~~lvGhS~GG~val~~a~~~p~~v~~lvl 124 (275)
+.+|-||..|.||.|.|+.. ...+.+ =..-..|+++++.+.- ..+|...|-|++|+..+.+|+..|.-.|.++.
T Consensus 78 a~GYavV~qDvRG~~~SeG~---~~~~~~~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p 154 (563)
T COG2936 78 AQGYAVVNQDVRGRGGSEGV---FDPESSREAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAP 154 (563)
T ss_pred cCceEEEEecccccccCCcc---cceeccccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeecc
Confidence 44799999999999999642 111112 1223446777777664 45799999999999999999999999999988
Q ss_pred ecCCCC
Q 045774 125 IGGSPR 130 (275)
Q Consensus 125 i~~~~~ 130 (275)
..+...
T Consensus 155 ~~~~~D 160 (563)
T COG2936 155 TEGLVD 160 (563)
T ss_pred cccccc
Confidence 766543
No 187
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=96.93 E-value=0.0023 Score=50.73 Aligned_cols=95 Identities=19% Similarity=0.256 Sum_probs=64.2
Q ss_pred eEEEEcCCCCChhhhhh---hHHHhh-cCCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhCCC----ceE
Q 045774 26 IIVFSHGFGSDQSVWSR---VIPSFT-RAYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALEID----RCA 97 (275)
Q Consensus 26 ~ivllHG~~~~~~~w~~---~~~~l~-~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~~----~~~ 97 (275)
-||||-|++..--.-.+ +...|. .+|.++-+-++.+- ... .. .|+++-++|+.+++++++.. +++
T Consensus 38 ~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy----~G~--Gt-~slk~D~edl~~l~~Hi~~~~fSt~vV 110 (299)
T KOG4840|consen 38 KVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSY----NGY--GT-FSLKDDVEDLKCLLEHIQLCGFSTDVV 110 (299)
T ss_pred EEEEEcccCCCccccccHHHHHHHHhhccceeeeeeccccc----ccc--cc-ccccccHHHHHHHHHHhhccCcccceE
Confidence 58999999876543333 333444 47999998877431 100 01 26889999999999988543 799
Q ss_pred EEEeChhHHHHHHHHH--hCCccccceeeecC
Q 045774 98 FVGHSVSAMIGLLAAI--HRPNLFSRLILIGG 127 (275)
Q Consensus 98 lvGhS~GG~val~~a~--~~p~~v~~lvli~~ 127 (275)
|+|||.|.-=.+++.. .-|..+...|+.++
T Consensus 111 L~GhSTGcQdi~yYlTnt~~~r~iraaIlqAp 142 (299)
T KOG4840|consen 111 LVGHSTGCQDIMYYLTNTTKDRKIRAAILQAP 142 (299)
T ss_pred EEecCccchHHHHHHHhccchHHHHHHHHhCc
Confidence 9999999988777652 23445666666554
No 188
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.87 E-value=0.0021 Score=52.39 Aligned_cols=38 Identities=18% Similarity=0.262 Sum_probs=25.5
Q ss_pred hhHHHHHHHHHHH----HhCCCceEEEEeChhHHHHHHHHHh
Q 045774 77 LDGYVDDLLSFLD----ALEIDRCAFVGHSVSAMIGLLAAIH 114 (275)
Q Consensus 77 ~~~~a~dl~~~l~----~l~~~~~~lvGhS~GG~val~~a~~ 114 (275)
+..+.+++...++ +....++++.||||||.+|..++..
T Consensus 107 ~~~~~~~~~~~~~~~~~~~p~~~i~vtGHSLGGaiA~l~a~~ 148 (229)
T cd00519 107 YKSLYNQVLPELKSALKQYPDYKIIVTGHSLGGALASLLALD 148 (229)
T ss_pred HHHHHHHHHHHHHHHHhhCCCceEEEEccCHHHHHHHHHHHH
Confidence 3444444444433 3234679999999999999887765
No 189
>PLN02162 triacylglycerol lipase
Probab=96.82 E-value=0.0032 Score=55.67 Aligned_cols=36 Identities=17% Similarity=0.079 Sum_probs=27.5
Q ss_pred hHHHHHHHHHHHHhCCCceEEEEeChhHHHHHHHHH
Q 045774 78 DGYVDDLLSFLDALEIDRCAFVGHSVSAMIGLLAAI 113 (275)
Q Consensus 78 ~~~a~dl~~~l~~l~~~~~~lvGhS~GG~val~~a~ 113 (275)
....+.+.+++++....++++.|||+||++|+.+|.
T Consensus 262 ~~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 262 YTIRQMLRDKLARNKNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHHHhCCCceEEEEecChHHHHHHHHHH
Confidence 345556666666666668999999999999988754
No 190
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=96.76 E-value=0.0023 Score=53.21 Aligned_cols=99 Identities=14% Similarity=0.254 Sum_probs=60.6
Q ss_pred ceEEEEcC--CCCChhhhhhhHHHhhcC----CEEEEEccCCCCCCCCCCCCcccc----cchhHHHHHHHHHHHHh-C-
Q 045774 25 SIIVFSHG--FGSDQSVWSRVIPSFTRA----YRVISFDLMCSGSCDPTNYDFQRY----ATLDGYVDDLLSFLDAL-E- 92 (275)
Q Consensus 25 ~~ivllHG--~~~~~~~w~~~~~~l~~~----~~via~Dl~G~G~S~~~~~~~~~~----~~~~~~a~dl~~~l~~l-~- 92 (275)
|++++.|| |..+...|..+-..+.++ --+|.+|-.- ... ....+ ..+..++++|.=.+++- .
T Consensus 99 pvl~~~DG~~~~~~g~i~~~~dsli~~g~i~pai~vgid~~d---~~~---R~~~~~~n~~~~~~L~~eLlP~v~~~yp~ 172 (299)
T COG2382 99 PVLYLQDGQDWFRSGRIPRILDSLIAAGEIPPAILVGIDYID---VKK---RREELHCNEAYWRFLAQELLPYVEERYPT 172 (299)
T ss_pred cEEEEeccHHHHhcCChHHHHHHHHHcCCCCCceEEecCCCC---HHH---HHHHhcccHHHHHHHHHHhhhhhhccCcc
Confidence 58899998 444555555554444442 2344444221 100 00111 12455555555555533 1
Q ss_pred ---CCceEEEEeChhHHHHHHHHHhCCccccceeeecCCC
Q 045774 93 ---IDRCAFVGHSVSAMIGLLAAIHRPNLFSRLILIGGSP 129 (275)
Q Consensus 93 ---~~~~~lvGhS~GG~val~~a~~~p~~v~~lvli~~~~ 129 (275)
-+.=+|.|-|+||.+++..+.+||+++-.++..+++.
T Consensus 173 ~~~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~ 212 (299)
T COG2382 173 SADADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSF 212 (299)
T ss_pred cccCCCcEEeccccccHHHHHHHhcCchhhceeeccCCcc
Confidence 2346899999999999999999999999998876643
No 191
>PLN00413 triacylglycerol lipase
Probab=96.68 E-value=0.0048 Score=54.70 Aligned_cols=35 Identities=17% Similarity=0.312 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHhCCCceEEEEeChhHHHHHHHHH
Q 045774 79 GYVDDLLSFLDALEIDRCAFVGHSVSAMIGLLAAI 113 (275)
Q Consensus 79 ~~a~dl~~~l~~l~~~~~~lvGhS~GG~val~~a~ 113 (275)
...+.+.+++++....++++.|||+||++|..+|.
T Consensus 269 ~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 269 TILRHLKEIFDQNPTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHH
Confidence 45667788887777778999999999999998874
No 192
>PLN02571 triacylglycerol lipase
Probab=96.47 E-value=0.0046 Score=54.18 Aligned_cols=37 Identities=19% Similarity=0.391 Sum_probs=28.1
Q ss_pred hHHHHHHHHHHHHhCCC--ceEEEEeChhHHHHHHHHHh
Q 045774 78 DGYVDDLLSFLDALEID--RCAFVGHSVSAMIGLLAAIH 114 (275)
Q Consensus 78 ~~~a~dl~~~l~~l~~~--~~~lvGhS~GG~val~~a~~ 114 (275)
+++.+++..+++....+ ++++.||||||++|+.+|..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 44556677777766443 58999999999999988764
No 193
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=96.44 E-value=0.032 Score=48.38 Aligned_cols=104 Identities=15% Similarity=0.163 Sum_probs=63.0
Q ss_pred CCceEEEEcCCCCChhhhhhhHH-------HhhcCCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhCCCc
Q 045774 23 GQSIIVFSHGFGSDQSVWSRVIP-------SFTRAYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALEIDR 95 (275)
Q Consensus 23 g~~~ivllHG~~~~~~~w~~~~~-------~l~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~~~ 95 (275)
.+|+|+++||-|---.....++. .|. .-.|+++|..-...-.. +..-++-+.+.++-...+++..|.++
T Consensus 121 ~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~-~~SILvLDYsLt~~~~~---~~~yPtQL~qlv~~Y~~Lv~~~G~~n 196 (374)
T PF10340_consen 121 SDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP-EVSILVLDYSLTSSDEH---GHKYPTQLRQLVATYDYLVESEGNKN 196 (374)
T ss_pred CCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC-CCeEEEEeccccccccC---CCcCchHHHHHHHHHHHHHhccCCCe
Confidence 35799999996543333322222 233 45788888664430000 11111235666666666776778889
Q ss_pred eEEEEeChhHHHHHHHHHh--CCc---cccceeeecCCCC
Q 045774 96 CAFVGHSVSAMIGLLAAIH--RPN---LFSRLILIGGSPR 130 (275)
Q Consensus 96 ~~lvGhS~GG~val~~a~~--~p~---~v~~lvli~~~~~ 130 (275)
++|+|=|-||.+++.+... .++ .-+++|+|++...
T Consensus 197 I~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~ 236 (374)
T PF10340_consen 197 IILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVN 236 (374)
T ss_pred EEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcC
Confidence 9999999999998765422 222 2478999987543
No 194
>PLN02454 triacylglycerol lipase
Probab=96.43 E-value=0.0056 Score=53.61 Aligned_cols=32 Identities=25% Similarity=0.454 Sum_probs=22.7
Q ss_pred HHHHHHHHhCCCc--eEEEEeChhHHHHHHHHHh
Q 045774 83 DLLSFLDALEIDR--CAFVGHSVSAMIGLLAAIH 114 (275)
Q Consensus 83 dl~~~l~~l~~~~--~~lvGhS~GG~val~~a~~ 114 (275)
.+..+++....++ +++.||||||++|+.+|..
T Consensus 215 ~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 215 KIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 3444444443444 8999999999999988754
No 195
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=96.40 E-value=0.14 Score=50.44 Aligned_cols=99 Identities=13% Similarity=0.191 Sum_probs=69.4
Q ss_pred cCCCceEEEEcCCCCChhhhhhhHHHhhcCCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhCC-CceEEE
Q 045774 21 GQGQSIIVFSHGFGSDQSVWSRVIPSFTRAYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALEI-DRCAFV 99 (275)
Q Consensus 21 g~g~~~ivllHG~~~~~~~w~~~~~~l~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~-~~~~lv 99 (275)
.+.+|+++|+|-.-+.......++..|. .|-||.-.... ...++++..|+-...-++++.. .+..++
T Consensus 2120 ~se~~~~Ffv~pIEG~tt~l~~la~rle---------~PaYglQ~T~~---vP~dSies~A~~yirqirkvQP~GPYrl~ 2187 (2376)
T KOG1202|consen 2120 QSEEPPLFFVHPIEGFTTALESLASRLE---------IPAYGLQCTEA---VPLDSIESLAAYYIRQIRKVQPEGPYRLA 2187 (2376)
T ss_pred cccCCceEEEeccccchHHHHHHHhhcC---------Ccchhhhcccc---CCcchHHHHHHHHHHHHHhcCCCCCeeee
Confidence 3445789999988666666666665443 34455321111 1124799999888888888765 479999
Q ss_pred EeChhHHHHHHHHHh--CCccccceeeecCCCCC
Q 045774 100 GHSVSAMIGLLAAIH--RPNLFSRLILIGGSPRF 131 (275)
Q Consensus 100 GhS~GG~val~~a~~--~p~~v~~lvli~~~~~~ 131 (275)
|+|+|..++.++|.. ..+....++++|++|.+
T Consensus 2188 GYSyG~~l~f~ma~~Lqe~~~~~~lillDGspty 2221 (2376)
T KOG1202|consen 2188 GYSYGACLAFEMASQLQEQQSPAPLILLDGSPTY 2221 (2376)
T ss_pred ccchhHHHHHHHHHHHHhhcCCCcEEEecCchHH
Confidence 999999999988754 34456679999998864
No 196
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=96.23 E-value=0.0063 Score=52.61 Aligned_cols=85 Identities=18% Similarity=0.304 Sum_probs=52.6
Q ss_pred ceEEEEcCCCC-ChhhhhhhHHHhhcCCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhCCCceEEEEeCh
Q 045774 25 SIIVFSHGFGS-DQSVWSRVIPSFTRAYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALEIDRCAFVGHSV 103 (275)
Q Consensus 25 ~~ivllHG~~~-~~~~w~~~~~~l~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~ 103 (275)
.-+|++||+-+ +...|...+......+.=..+..+|+=..-....+..++-. ...++++.+.+....++++-+||||+
T Consensus 81 HLvVlthGi~~~~~~~~~~~~~~~~kk~p~~~iv~~g~~~~~~~T~~Gv~~lG-~Rla~~~~e~~~~~si~kISfvghSL 159 (405)
T KOG4372|consen 81 HLVVLTHGLHGADMEYWKEKIEQMTKKMPDKLIVVRGKMNNMCQTFDGVDVLG-ERLAEEVKETLYDYSIEKISFVGHSL 159 (405)
T ss_pred eEEEeccccccccHHHHHHHHHhhhcCCCcceEeeeccccchhhccccceeee-cccHHHHhhhhhccccceeeeeeeec
Confidence 47999999765 78999988887766432223333333221110001111111 33566677777666789999999999
Q ss_pred hHHHHHH
Q 045774 104 SAMIGLL 110 (275)
Q Consensus 104 GG~val~ 110 (275)
||.++..
T Consensus 160 GGLvar~ 166 (405)
T KOG4372|consen 160 GGLVARY 166 (405)
T ss_pred CCeeeeE
Confidence 9999754
No 197
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=96.18 E-value=0.019 Score=49.11 Aligned_cols=61 Identities=21% Similarity=0.280 Sum_probs=47.8
Q ss_pred CCCCCcEEEEEeCCCCCCCHHHHHHHHHHcCCCccEEEcCCCCCCCCCCChHHHHHHHHHHHHh
Q 045774 210 GLVRVPVCIIQSSVDLSVPPAVAEYMRRHLGGPTVLEFLPTHGHLPHVSSPAPVANAIQQLLRR 273 (275)
Q Consensus 210 ~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 273 (275)
.++.+|..++.++.|..++++.+..+.+.+|+.+.+..+||..|.. .+..+.+.+..|+.+
T Consensus 326 ~RLalpKyivnaSgDdff~pDsa~lYyd~LPG~kaLrmvPN~~H~~---~n~~i~esl~~flnr 386 (507)
T COG4287 326 LRLALPKYIVNASGDDFFVPDSANLYYDDLPGEKALRMVPNDPHNL---INQFIKESLEPFLNR 386 (507)
T ss_pred hhccccceeecccCCcccCCCccceeeccCCCceeeeeCCCCcchh---hHHHHHHHHHHHHHH
Confidence 4678999999999999998888888889999977889999988853 444555555556543
No 198
>PLN02408 phospholipase A1
Probab=96.17 E-value=0.0087 Score=51.68 Aligned_cols=34 Identities=21% Similarity=0.376 Sum_probs=25.3
Q ss_pred HHHHHHHHHHhCCC--ceEEEEeChhHHHHHHHHHh
Q 045774 81 VDDLLSFLDALEID--RCAFVGHSVSAMIGLLAAIH 114 (275)
Q Consensus 81 a~dl~~~l~~l~~~--~~~lvGhS~GG~val~~a~~ 114 (275)
.+++..+++....+ ++++.|||+||++|+.+|..
T Consensus 185 l~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~d 220 (365)
T PLN02408 185 REEIARLLQSYGDEPLSLTITGHSLGAALATLTAYD 220 (365)
T ss_pred HHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHH
Confidence 35556666665544 48999999999999987765
No 199
>PLN02934 triacylglycerol lipase
Probab=95.96 E-value=0.012 Score=52.64 Aligned_cols=36 Identities=19% Similarity=0.268 Sum_probs=29.1
Q ss_pred hHHHHHHHHHHHHhCCCceEEEEeChhHHHHHHHHH
Q 045774 78 DGYVDDLLSFLDALEIDRCAFVGHSVSAMIGLLAAI 113 (275)
Q Consensus 78 ~~~a~dl~~~l~~l~~~~~~lvGhS~GG~val~~a~ 113 (275)
....+.+.+++++....++++.|||+||++|..+|.
T Consensus 305 ~~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 305 YAVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHH
Confidence 446666777777766678999999999999998864
No 200
>PLN02324 triacylglycerol lipase
Probab=95.93 E-value=0.013 Score=51.37 Aligned_cols=35 Identities=26% Similarity=0.473 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHhCCC--ceEEEEeChhHHHHHHHHHh
Q 045774 80 YVDDLLSFLDALEID--RCAFVGHSVSAMIGLLAAIH 114 (275)
Q Consensus 80 ~a~dl~~~l~~l~~~--~~~lvGhS~GG~val~~a~~ 114 (275)
..+++..++++...+ ++++.|||+||++|+.+|..
T Consensus 199 Vl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 199 VQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 344466666665443 58999999999999988753
No 201
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=95.93 E-value=0.053 Score=48.25 Aligned_cols=107 Identities=17% Similarity=0.261 Sum_probs=79.2
Q ss_pred cCCCceEEEEcCCCCChhhhhh----hHHHhhc--CCEEEEEccCCCCCCCCCC-C--CcccccchhHHHHHHHHHHHHh
Q 045774 21 GQGQSIIVFSHGFGSDQSVWSR----VIPSFTR--AYRVISFDLMCSGSCDPTN-Y--DFQRYATLDGYVDDLLSFLDAL 91 (275)
Q Consensus 21 g~g~~~ivllHG~~~~~~~w~~----~~~~l~~--~~~via~Dl~G~G~S~~~~-~--~~~~~~~~~~~a~dl~~~l~~l 91 (275)
.+|.|+.|+|-|=+.-...|-. ....+++ +-.|+-+..|=+|+|.|.. . .-.++.|......|++++++++
T Consensus 83 ~~~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~ 162 (514)
T KOG2182|consen 83 KPGGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAM 162 (514)
T ss_pred cCCCceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHH
Confidence 4566788888885555555632 2334555 4589999999999986521 1 1134567888899999999987
Q ss_pred CCC-------ceEEEEeChhHHHHHHHHHhCCccccceeeecC
Q 045774 92 EID-------RCAFVGHSVSAMIGLLAAIHRPNLFSRLILIGG 127 (275)
Q Consensus 92 ~~~-------~~~lvGhS~GG~val~~a~~~p~~v~~lvli~~ 127 (275)
+.+ +.+..|-|+-|.++.-+=.+||+.+.+.|.-++
T Consensus 163 n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSa 205 (514)
T KOG2182|consen 163 NAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSA 205 (514)
T ss_pred HhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeeccccc
Confidence 432 689999999999998888899999999886554
No 202
>PLN02310 triacylglycerol lipase
Probab=95.92 E-value=0.02 Score=50.10 Aligned_cols=36 Identities=17% Similarity=0.279 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHhC----CCceEEEEeChhHHHHHHHHHh
Q 045774 79 GYVDDLLSFLDALE----IDRCAFVGHSVSAMIGLLAAIH 114 (275)
Q Consensus 79 ~~a~dl~~~l~~l~----~~~~~lvGhS~GG~val~~a~~ 114 (275)
...+++..+++... .-++++.|||+||++|+.+|..
T Consensus 190 qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 190 QVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 34455666666553 1268999999999999987743
No 203
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=95.91 E-value=0.036 Score=50.90 Aligned_cols=105 Identities=20% Similarity=0.193 Sum_probs=54.6
Q ss_pred CceEEEEcCCC---CCh--hhhhhhHHHhhcCCEEEEEccC----CCCCCCCCCCCcccccchhHHHHH---HHHHHHHh
Q 045774 24 QSIIVFSHGFG---SDQ--SVWSRVIPSFTRAYRVISFDLM----CSGSCDPTNYDFQRYATLDGYVDD---LLSFLDAL 91 (275)
Q Consensus 24 ~~~ivllHG~~---~~~--~~w~~~~~~l~~~~~via~Dl~----G~G~S~~~~~~~~~~~~~~~~a~d---l~~~l~~l 91 (275)
-|++|+|||-+ +++ ..+....-...++.=||++..| |+-.+.....+...+ -+.|+... +.+-+.+.
T Consensus 125 lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~-Gl~Dq~~AL~WV~~nI~~F 203 (535)
T PF00135_consen 125 LPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSGNY-GLLDQRLALKWVQDNIAAF 203 (535)
T ss_dssp EEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-BSSSTTSHBSTH-HHHHHHHHHHHHHHHGGGG
T ss_pred cceEEEeecccccCCCcccccccccccccCCCEEEEEecccccccccccccccccCchhh-hhhhhHHHHHHHHhhhhhc
Confidence 37999999832 222 2232222122346778888777 443332111000222 24444433 44455566
Q ss_pred CC--CceEEEEeChhHHHHHHHHHh--CCccccceeeecCCC
Q 045774 92 EI--DRCAFVGHSVSAMIGLLAAIH--RPNLFSRLILIGGSP 129 (275)
Q Consensus 92 ~~--~~~~lvGhS~GG~val~~a~~--~p~~v~~lvli~~~~ 129 (275)
|. ++++|.|||-||+.+...... ....+.++|+.++++
T Consensus 204 GGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~ 245 (535)
T PF00135_consen 204 GGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSA 245 (535)
T ss_dssp TEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--T
T ss_pred ccCCcceeeeeecccccccceeeecccccccccccccccccc
Confidence 65 469999999999998765544 235799999998754
No 204
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=95.80 E-value=0.039 Score=49.11 Aligned_cols=113 Identities=19% Similarity=0.165 Sum_probs=61.9
Q ss_pred hceEEec-----CCCceEEEEcCC---CCChhhhhhhHHHhhc-C-CEEEEEccC--CCCCCC---CC--CCCcccccch
Q 045774 15 LNVRVVG-----QGQSIIVFSHGF---GSDQSVWSRVIPSFTR-A-YRVISFDLM--CSGSCD---PT--NYDFQRYATL 77 (275)
Q Consensus 15 ~~~~~~g-----~g~~~ivllHG~---~~~~~~w~~~~~~l~~-~-~~via~Dl~--G~G~S~---~~--~~~~~~~~~~ 77 (275)
|+..++. ++.|++|+|||- +++...-.+--..|++ + .=|++++.| -+|.=+ -. .....+ .-+
T Consensus 80 L~LNIwaP~~~a~~~PVmV~IHGG~y~~Gs~s~~~ydgs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n-~Gl 158 (491)
T COG2272 80 LYLNIWAPEVPAEKLPVMVYIHGGGYIMGSGSEPLYDGSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASN-LGL 158 (491)
T ss_pred eeEEeeccCCCCCCCcEEEEEeccccccCCCcccccChHHHHhcCCEEEEEeCcccccceeeehhhcccccccccc-ccH
Confidence 5556553 244799999983 2222221223345555 3 556666666 122111 00 000011 123
Q ss_pred hHHH---HHHHHHHHHhCCC--ceEEEEeChhHHHHHHHHHhCCc---cccceeeecCCC
Q 045774 78 DGYV---DDLLSFLDALEID--RCAFVGHSVSAMIGLLAAIHRPN---LFSRLILIGGSP 129 (275)
Q Consensus 78 ~~~a---~dl~~~l~~l~~~--~~~lvGhS~GG~val~~a~~~p~---~v~~lvli~~~~ 129 (275)
.|++ +.+.+-+++.|.+ ++.|.|+|-||+.++-+.+ .|. .+.++|+.++..
T Consensus 159 ~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla-~P~AkGLF~rAi~~Sg~~ 217 (491)
T COG2272 159 LDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLA-VPSAKGLFHRAIALSGAA 217 (491)
T ss_pred HHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhc-CccchHHHHHHHHhCCCC
Confidence 4433 3456666777654 6999999999999765443 354 577777777644
No 205
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=95.77 E-value=0.048 Score=48.64 Aligned_cols=101 Identities=15% Similarity=0.095 Sum_probs=63.5
Q ss_pred CceEEEEcCCCCChhhhhhhHHH-------------------hhcCCEEEEEccC-CCCCCCCCCCCcccccchhHHHHH
Q 045774 24 QSIIVFSHGFGSDQSVWSRVIPS-------------------FTRAYRVISFDLM-CSGSCDPTNYDFQRYATLDGYVDD 83 (275)
Q Consensus 24 ~~~ivllHG~~~~~~~w~~~~~~-------------------l~~~~~via~Dl~-G~G~S~~~~~~~~~~~~~~~~a~d 83 (275)
+|.|+++.|-++.+..|-.+.+. +.+.-.++.+|+| |.|.|.... + +...++....+|
T Consensus 101 rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~adLvFiDqPvGTGfS~a~~-~-e~~~d~~~~~~D 178 (498)
T COG2939 101 RPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDFADLVFIDQPVGTGFSRALG-D-EKKKDFEGAGKD 178 (498)
T ss_pred CceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccCCceEEEecCcccCcccccc-c-ccccchhccchh
Confidence 46899999987777777666421 1112369999966 999885311 1 112245566666
Q ss_pred HHHHHH-------HhCC--CceEEEEeChhHHHHHHHHHhCCcc---ccceeeec
Q 045774 84 LLSFLD-------ALEI--DRCAFVGHSVSAMIGLLAAIHRPNL---FSRLILIG 126 (275)
Q Consensus 84 l~~~l~-------~l~~--~~~~lvGhS~GG~val~~a~~~p~~---v~~lvli~ 126 (275)
+..+++ +..- .+.+|+|-|+||.-+-.+|..--++ .++++++.
T Consensus 179 ~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nls 233 (498)
T COG2939 179 VYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLS 233 (498)
T ss_pred HHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEee
Confidence 555444 3333 4899999999999887776543332 45555443
No 206
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=95.67 E-value=0.13 Score=41.89 Aligned_cols=96 Identities=20% Similarity=0.195 Sum_probs=56.2
Q ss_pred eEEEEcCC--CCC-hhhhhhhHHHhhc-CCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhCCC----ceE
Q 045774 26 IIVFSHGF--GSD-QSVWSRVIPSFTR-AYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALEID----RCA 97 (275)
Q Consensus 26 ~ivllHG~--~~~-~~~w~~~~~~l~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~~----~~~ 97 (275)
+|-||-|. +.. .-.|+.+.+.|++ +|.|||.-..- | ..+ ....-.-+..+-.-+.++.+.-+.. ++.
T Consensus 19 vihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~-t---fDH-~~~A~~~~~~f~~~~~~L~~~~~~~~~~lP~~ 93 (250)
T PF07082_consen 19 VIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVV-T---FDH-QAIAREVWERFERCLRALQKRGGLDPAYLPVY 93 (250)
T ss_pred EEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCC-C---CcH-HHHHHHHHHHHHHHHHHHHHhcCCCcccCCee
Confidence 78888883 333 4677889998876 79999985431 1 010 0000001222222222222222222 567
Q ss_pred EEEeChhHHHHHHHHHhCCccccceeeec
Q 045774 98 FVGHSVSAMIGLLAAIHRPNLFSRLILIG 126 (275)
Q Consensus 98 lvGhS~GG~val~~a~~~p~~v~~lvli~ 126 (275)
-||||||+.+-+.+...++..-++-++++
T Consensus 94 ~vGHSlGcklhlLi~s~~~~~r~gniliS 122 (250)
T PF07082_consen 94 GVGHSLGCKLHLLIGSLFDVERAGNILIS 122 (250)
T ss_pred eeecccchHHHHHHhhhccCcccceEEEe
Confidence 89999999999888877765557777775
No 207
>PLN02802 triacylglycerol lipase
Probab=95.62 E-value=0.019 Score=51.38 Aligned_cols=35 Identities=23% Similarity=0.377 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHhCCC--ceEEEEeChhHHHHHHHHHh
Q 045774 80 YVDDLLSFLDALEID--RCAFVGHSVSAMIGLLAAIH 114 (275)
Q Consensus 80 ~a~dl~~~l~~l~~~--~~~lvGhS~GG~val~~a~~ 114 (275)
..+++..+++....+ ++++.|||+||++|+.+|..
T Consensus 314 Vl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 314 VVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADE 350 (509)
T ss_pred HHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHH
Confidence 344556666655433 58999999999999987754
No 208
>PLN02753 triacylglycerol lipase
Probab=95.56 E-value=0.021 Score=51.40 Aligned_cols=34 Identities=15% Similarity=0.280 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHhCC-----CceEEEEeChhHHHHHHHHH
Q 045774 80 YVDDLLSFLDALEI-----DRCAFVGHSVSAMIGLLAAI 113 (275)
Q Consensus 80 ~a~dl~~~l~~l~~-----~~~~lvGhS~GG~val~~a~ 113 (275)
..+.+..++++... -++++.|||+||++|+.+|.
T Consensus 293 Vl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~ 331 (531)
T PLN02753 293 ILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAY 331 (531)
T ss_pred HHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHH
Confidence 34445666665532 37999999999999998875
No 209
>PLN02719 triacylglycerol lipase
Probab=95.30 E-value=0.028 Score=50.40 Aligned_cols=35 Identities=14% Similarity=0.275 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHhCC-----CceEEEEeChhHHHHHHHHHh
Q 045774 80 YVDDLLSFLDALEI-----DRCAFVGHSVSAMIGLLAAIH 114 (275)
Q Consensus 80 ~a~dl~~~l~~l~~-----~~~~lvGhS~GG~val~~a~~ 114 (275)
..+.+..++++... .++++.|||+||++|+.+|..
T Consensus 279 Vl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 279 VLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 33445555555432 268999999999999987753
No 210
>PLN03037 lipase class 3 family protein; Provisional
Probab=95.29 E-value=0.028 Score=50.55 Aligned_cols=35 Identities=17% Similarity=0.349 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHhC----CCceEEEEeChhHHHHHHHHHh
Q 045774 80 YVDDLLSFLDALE----IDRCAFVGHSVSAMIGLLAAIH 114 (275)
Q Consensus 80 ~a~dl~~~l~~l~----~~~~~lvGhS~GG~val~~a~~ 114 (275)
..+++..+++... ..++++.|||+||++|+..|..
T Consensus 300 Vl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 300 VMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 4456677776553 1258999999999999987743
No 211
>PLN02761 lipase class 3 family protein
Probab=95.12 E-value=0.035 Score=49.96 Aligned_cols=34 Identities=18% Similarity=0.267 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHhC----C--CceEEEEeChhHHHHHHHHH
Q 045774 80 YVDDLLSFLDALE----I--DRCAFVGHSVSAMIGLLAAI 113 (275)
Q Consensus 80 ~a~dl~~~l~~l~----~--~~~~lvGhS~GG~val~~a~ 113 (275)
..+.+..+++... . -++++.|||+||++|+..|.
T Consensus 274 Vl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 274 VLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred HHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 3444555655542 1 25999999999999998774
No 212
>PLN02209 serine carboxypeptidase
Probab=95.05 E-value=0.13 Score=46.00 Aligned_cols=61 Identities=13% Similarity=0.185 Sum_probs=45.0
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHHHHcC------------------------CCccEEEcCCCCCCCCCCChHHHHHHHH
Q 045774 213 RVPVCIIQSSVDLSVPPAVAEYMRRHLG------------------------GPTVLEFLPTHGHLPHVSSPAPVANAIQ 268 (275)
Q Consensus 213 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~------------------------~~~~~~~i~~~gH~~~~e~p~~~~~~i~ 268 (275)
.+++|+..|+.|.+++.--.+...+.++ +.-+..++-+|||+++ .+|++..+.+.
T Consensus 351 girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp-~qP~~al~m~~ 429 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAE-YLPEESSIMFQ 429 (437)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcC-cCHHHHHHHHH
Confidence 5899999999999998755554433221 1023445678999997 69999999999
Q ss_pred HHHHhh
Q 045774 269 QLLRRR 274 (275)
Q Consensus 269 ~fl~~~ 274 (275)
+|+.+.
T Consensus 430 ~fi~~~ 435 (437)
T PLN02209 430 RWISGQ 435 (437)
T ss_pred HHHcCC
Confidence 999753
No 213
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=94.91 E-value=0.42 Score=44.27 Aligned_cols=53 Identities=21% Similarity=0.246 Sum_probs=44.1
Q ss_pred cchhHHHHHHHHHHHHh--CCCceEEEEeChhHHHHHHHHHhCCccccceeeecC
Q 045774 75 ATLDGYVDDLLSFLDAL--EIDRCAFVGHSVSAMIGLLAAIHRPNLFSRLILIGG 127 (275)
Q Consensus 75 ~~~~~~a~dl~~~l~~l--~~~~~~lvGhS~GG~val~~a~~~p~~v~~lvli~~ 127 (275)
.|+.|+.+-...++++- ..++++..|-|-||++.-..+...|+.++++|.-.+
T Consensus 506 NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VP 560 (682)
T COG1770 506 NTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVP 560 (682)
T ss_pred ccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCC
Confidence 47999998777777643 235799999999999999999999999999987544
No 214
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=94.88 E-value=0.046 Score=47.06 Aligned_cols=37 Identities=22% Similarity=0.385 Sum_probs=27.2
Q ss_pred CCCceEEEEeChhHHHHHHHHHhCCc-----cccceeeecCC
Q 045774 92 EIDRCAFVGHSVSAMIGLLAAIHRPN-----LFSRLILIGGS 128 (275)
Q Consensus 92 ~~~~~~lvGhS~GG~val~~a~~~p~-----~v~~lvli~~~ 128 (275)
|.++++|||||+|+.+...+...-.+ .|+.+++++++
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gap 259 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAP 259 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCC
Confidence 56689999999999997655433222 47888888753
No 215
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=94.87 E-value=0.096 Score=45.48 Aligned_cols=77 Identities=19% Similarity=0.179 Sum_probs=52.2
Q ss_pred EEEEcCCCCChhhhhhhHHHhhc-CCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHh----CCCceEEEEe
Q 045774 27 IVFSHGFGSDQSVWSRVIPSFTR-AYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDAL----EIDRCAFVGH 101 (275)
Q Consensus 27 ivllHG~~~~~~~w~~~~~~l~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l----~~~~~~lvGh 101 (275)
-||.-|=|+-.+.=+.+...|++ +..|+.+|=.=|=+|.+ |-+..++|+..+++.. +.+++.|||+
T Consensus 263 av~~SGDGGWr~lDk~v~~~l~~~gvpVvGvdsLRYfW~~r---------tPe~~a~Dl~r~i~~y~~~w~~~~~~liGy 333 (456)
T COG3946 263 AVFYSGDGGWRDLDKEVAEALQKQGVPVVGVDSLRYFWSER---------TPEQIAADLSRLIRFYARRWGAKRVLLIGY 333 (456)
T ss_pred EEEEecCCchhhhhHHHHHHHHHCCCceeeeehhhhhhccC---------CHHHHHHHHHHHHHHHHHhhCcceEEEEee
Confidence 34444433333333456777876 69999999554544432 4678888888888754 5678999999
Q ss_pred ChhHHHHHHHH
Q 045774 102 SVSAMIGLLAA 112 (275)
Q Consensus 102 S~GG~val~~a 112 (275)
|.|+-|--...
T Consensus 334 SfGADvlP~~~ 344 (456)
T COG3946 334 SFGADVLPFAY 344 (456)
T ss_pred cccchhhHHHH
Confidence 99999854433
No 216
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=94.79 E-value=0.055 Score=42.27 Aligned_cols=51 Identities=18% Similarity=0.216 Sum_probs=35.1
Q ss_pred hhHHHHHHHHHHH----HhCCCceEEEEeChhHHHHHHHHHh------CCccccceeeecC
Q 045774 77 LDGYVDDLLSFLD----ALEIDRCAFVGHSVSAMIGLLAAIH------RPNLFSRLILIGG 127 (275)
Q Consensus 77 ~~~~a~dl~~~l~----~l~~~~~~lvGhS~GG~val~~a~~------~p~~v~~lvli~~ 127 (275)
...=++++...++ .=-..+++|+|+|.|++|+..++.. ..++|.++++++-
T Consensus 60 ~~~G~~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGd 120 (179)
T PF01083_consen 60 VAAGVANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGD 120 (179)
T ss_dssp HHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecC
Confidence 3334444444444 3334589999999999999988766 3467888888864
No 217
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=94.65 E-value=0.17 Score=45.24 Aligned_cols=61 Identities=16% Similarity=0.199 Sum_probs=45.1
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHHHHcC------------------------CCccEEEcCCCCCCCCCCChHHHHHHHH
Q 045774 213 RVPVCIIQSSVDLSVPPAVAEYMRRHLG------------------------GPTVLEFLPTHGHLPHVSSPAPVANAIQ 268 (275)
Q Consensus 213 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~------------------------~~~~~~~i~~~gH~~~~e~p~~~~~~i~ 268 (275)
.+++|+-.|+.|.++|.--.+...+.++ +.-+..++-+|||+++ .+|++..+.+.
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp-~qP~~al~m~~ 425 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 425 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCC-CCHHHHHHHHH
Confidence 5899999999999998765554433221 1013445668999997 69999999999
Q ss_pred HHHHhh
Q 045774 269 QLLRRR 274 (275)
Q Consensus 269 ~fl~~~ 274 (275)
+|+.+.
T Consensus 426 ~Fi~~~ 431 (433)
T PLN03016 426 RWISGQ 431 (433)
T ss_pred HHHcCC
Confidence 999753
No 218
>PLN02847 triacylglycerol lipase
Probab=94.62 E-value=0.059 Score=49.22 Aligned_cols=22 Identities=23% Similarity=0.161 Sum_probs=18.0
Q ss_pred CCceEEEEeChhHHHHHHHHHh
Q 045774 93 IDRCAFVGHSVSAMIGLLAAIH 114 (275)
Q Consensus 93 ~~~~~lvGhS~GG~val~~a~~ 114 (275)
.-+++++|||+||.+|..++..
T Consensus 250 dYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 250 DFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred CCeEEEeccChHHHHHHHHHHH
Confidence 3479999999999999876654
No 219
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=94.35 E-value=0.035 Score=39.66 Aligned_cols=22 Identities=18% Similarity=0.317 Sum_probs=12.9
Q ss_pred CCceEEEEcCCCCChhhhhhhH
Q 045774 23 GQSIIVFSHGFGSDQSVWSRVI 44 (275)
Q Consensus 23 g~~~ivllHG~~~~~~~w~~~~ 44 (275)
+..||||+|||++|--.|..++
T Consensus 91 ~aiPLll~HGWPgSf~Ef~~vI 112 (112)
T PF06441_consen 91 NAIPLLLLHGWPGSFLEFLKVI 112 (112)
T ss_dssp T-EEEEEE--SS--GGGGHHHH
T ss_pred CCeEEEEECCCCccHHhHHhhC
Confidence 3348999999999987776653
No 220
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=94.14 E-value=0.057 Score=47.94 Aligned_cols=61 Identities=16% Similarity=0.205 Sum_probs=42.9
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHHHHcC--------------C-----------CccEEEcCCCCCCCCCCChHHHHHHH
Q 045774 213 RVPVCIIQSSVDLSVPPAVAEYMRRHLG--------------G-----------PTVLEFLPTHGHLPHVSSPAPVANAI 267 (275)
Q Consensus 213 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~--------------~-----------~~~~~~i~~~gH~~~~e~p~~~~~~i 267 (275)
.+++|+..|..|.++|.--.+...+.+. + .-+..+|.+|||+++.++|++..+.+
T Consensus 330 ~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~~~~~~~G~~k~~~~ltf~~V~~AGHmvP~dqP~~a~~m~ 409 (415)
T PF00450_consen 330 GIRVLIYNGDLDLICNFLGTERWIDNLNWSGKDGFRQWPRKVNGQVAGYVKQYGNLTFVTVRGAGHMVPQDQPEAALQMF 409 (415)
T ss_dssp T-EEEEEEETT-SSS-HHHHHHHHHCTECTEEEEEEEEEEETTCSEEEEEEEETTEEEEEETT--SSHHHHSHHHHHHHH
T ss_pred cceeEEeccCCCEEEEeccchhhhhccccCcccccccccccccccccceeEEeccEEEEEEcCCcccChhhCHHHHHHHH
Confidence 3999999999999999776665544221 0 01245678999999999999999999
Q ss_pred HHHHHh
Q 045774 268 QQLLRR 273 (275)
Q Consensus 268 ~~fl~~ 273 (275)
++||.+
T Consensus 410 ~~fl~g 415 (415)
T PF00450_consen 410 RRFLKG 415 (415)
T ss_dssp HHHHCT
T ss_pred HHHhcC
Confidence 999864
No 221
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=94.08 E-value=0.13 Score=40.89 Aligned_cols=39 Identities=15% Similarity=0.083 Sum_probs=30.1
Q ss_pred hhHHHHHHHHHHHHhCC-CceEEEEeChhHHHHHHHHHhC
Q 045774 77 LDGYVDDLLSFLDALEI-DRCAFVGHSVSAMIGLLAAIHR 115 (275)
Q Consensus 77 ~~~~a~dl~~~l~~l~~-~~~~lvGhS~GG~val~~a~~~ 115 (275)
+.|..+....+|++.+. ++++|+|||=|+++.+++...+
T Consensus 77 y~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 77 YSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 45556666667777754 5899999999999999887664
No 222
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=93.83 E-value=0.5 Score=43.59 Aligned_cols=99 Identities=13% Similarity=0.188 Sum_probs=61.0
Q ss_pred EEEcCCCCChh----hhhhhHH-HhhcCCEEEEEccCCCCCCCCC---C-CCcccccchhHHHHHHHHHHHHh--CCCce
Q 045774 28 VFSHGFGSDQS----VWSRVIP-SFTRAYRVISFDLMCSGSCDPT---N-YDFQRYATLDGYVDDLLSFLDAL--EIDRC 96 (275)
Q Consensus 28 vllHG~~~~~~----~w~~~~~-~l~~~~~via~Dl~G~G~S~~~---~-~~~~~~~~~~~~a~dl~~~l~~l--~~~~~ 96 (275)
.||||.|+-.. .|+.-.- .+..++-....|.||=|.=... . ....+--+++++..-..-++++- ..++.
T Consensus 472 ~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G~~WHk~G~lakKqN~f~Dfia~AeyLve~gyt~~~kL 551 (712)
T KOG2237|consen 472 LLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYGEQWHKDGRLAKKQNSFDDFIACAEYLVENGYTQPSKL 551 (712)
T ss_pred eEEEEecccceeeccccccceeEEEecceEEEEEeeccCcccccchhhccchhhhcccHHHHHHHHHHHHHcCCCCccce
Confidence 46666555443 3332211 2334566666788987633210 0 00111125777776666666532 23578
Q ss_pred EEEEeChhHHHHHHHHHhCCccccceeeec
Q 045774 97 AFVGHSVSAMIGLLAAIHRPNLFSRLILIG 126 (275)
Q Consensus 97 ~lvGhS~GG~val~~a~~~p~~v~~lvli~ 126 (275)
.+.|.|-||.++-.++.++|+.+..+|+--
T Consensus 552 ~i~G~SaGGlLvga~iN~rPdLF~avia~V 581 (712)
T KOG2237|consen 552 AIEGGSAGGLLVGACINQRPDLFGAVIAKV 581 (712)
T ss_pred eEecccCccchhHHHhccCchHhhhhhhcC
Confidence 999999999999999999999999887643
No 223
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=93.75 E-value=0.054 Score=34.30 Aligned_cols=19 Identities=16% Similarity=0.478 Sum_probs=11.3
Q ss_pred CCceEEEEcCCCCChhhhh
Q 045774 23 GQSIIVFSHGFGSDQSVWS 41 (275)
Q Consensus 23 g~~~ivllHG~~~~~~~w~ 41 (275)
.+++|+|.||+.+++..|-
T Consensus 42 ~k~pVll~HGL~~ss~~wv 60 (63)
T PF04083_consen 42 KKPPVLLQHGLLQSSDDWV 60 (63)
T ss_dssp T--EEEEE--TT--GGGGC
T ss_pred CCCcEEEECCcccChHHHH
Confidence 3568999999999999984
No 224
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=93.39 E-value=0.13 Score=44.37 Aligned_cols=37 Identities=22% Similarity=0.304 Sum_probs=29.7
Q ss_pred hHHHHHHHHHHHHhCCCceEEEEeChhHHHHHHHHHh
Q 045774 78 DGYVDDLLSFLDALEIDRCAFVGHSVSAMIGLLAAIH 114 (275)
Q Consensus 78 ~~~a~dl~~~l~~l~~~~~~lvGhS~GG~val~~a~~ 114 (275)
..+-+++..+++....-++.+-|||+||++|..+|..
T Consensus 155 ~~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPNYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHH
Confidence 4667777778887776679999999999999877643
No 225
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=93.31 E-value=0.28 Score=42.07 Aligned_cols=60 Identities=17% Similarity=0.192 Sum_probs=43.9
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHHHHcC------------C-----------C-ccEEEcCCCCCCCCCCChHHHHHHHH
Q 045774 213 RVPVCIIQSSVDLSVPPAVAEYMRRHLG------------G-----------P-TVLEFLPTHGHLPHVSSPAPVANAIQ 268 (275)
Q Consensus 213 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~------------~-----------~-~~~~~i~~~gH~~~~e~p~~~~~~i~ 268 (275)
.+++|+-.|+.|.+++.--.+...+.+. + . -+..++-+|||+++ .+|+...+.+.
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~al~m~~ 311 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 311 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHHHHHHHH
Confidence 4899999999999998754444333221 1 0 23345568999997 59999999999
Q ss_pred HHHHh
Q 045774 269 QLLRR 273 (275)
Q Consensus 269 ~fl~~ 273 (275)
+|+.+
T Consensus 312 ~fi~~ 316 (319)
T PLN02213 312 RWISG 316 (319)
T ss_pred HHHcC
Confidence 99975
No 226
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=93.01 E-value=0.27 Score=37.65 Aligned_cols=111 Identities=14% Similarity=0.127 Sum_probs=59.7
Q ss_pred hceEEecCCCceEEEEcCCCCChhhhhh--hHHHhhc---CCEEEEEccCCCCCCCC--CCCCcccccchhHHHHHHHHH
Q 045774 15 LNVRVVGQGQSIIVFSHGFGSDQSVWSR--VIPSFTR---AYRVISFDLMCSGSCDP--TNYDFQRYATLDGYVDDLLSF 87 (275)
Q Consensus 15 ~~~~~~g~g~~~ivllHG~~~~~~~w~~--~~~~l~~---~~~via~Dl~G~G~S~~--~~~~~~~~~~~~~~a~dl~~~ 87 (275)
+.+..+|-+..+||+.+--++.-..+.. .+..|++ .-+|-.+-+-|--.-+. ...+.. ...+...+--.-+
T Consensus 17 Mel~ryGHaG~pVvvFpts~Grf~eyed~G~v~ala~fie~G~vQlft~~gldsESf~a~h~~~a--dr~~rH~AyerYv 94 (227)
T COG4947 17 MELNRYGHAGIPVVVFPTSGGRFNEYEDFGMVDALASFIEEGLVQLFTLSGLDSESFLATHKNAA--DRAERHRAYERYV 94 (227)
T ss_pred hhhhhccCCCCcEEEEecCCCcchhhhhcccHHHHHHHHhcCcEEEEEecccchHhHhhhcCCHH--HHHHHHHHHHHHH
Confidence 3445567544456666655554444433 3344443 23444444344322111 000000 1122222222223
Q ss_pred HHHhCCCceEEEEeChhHHHHHHHHHhCCccccceeeecC
Q 045774 88 LDALEIDRCAFVGHSVSAMIGLLAAIHRPNLFSRLILIGG 127 (275)
Q Consensus 88 l~~l~~~~~~lvGhS~GG~val~~a~~~p~~v~~lvli~~ 127 (275)
+++.-....++-|-||||.-|..+..++|+...++|.+++
T Consensus 95 ~eEalpgs~~~sgcsmGayhA~nfvfrhP~lftkvialSG 134 (227)
T COG4947 95 IEEALPGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSG 134 (227)
T ss_pred HHhhcCCCccccccchhhhhhhhhheeChhHhhhheeecc
Confidence 4433345577789999999999999999999999998875
No 227
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=92.72 E-value=0.13 Score=45.01 Aligned_cols=117 Identities=12% Similarity=0.141 Sum_probs=85.2
Q ss_pred hhHhhhhceEEecCCCceEEEEcCCCCChhhhh-hhHHHhhcCCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHH
Q 045774 9 EFLLEALNVRVVGQGQSIIVFSHGFGSDQSVWS-RVIPSFTRAYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSF 87 (275)
Q Consensus 9 ~~~~~~~~~~~~g~g~~~ivllHG~~~~~~~w~-~~~~~l~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~ 87 (275)
++|=-++.+-..+...|.|+..-|.+-+..-.. +....| +-+-+.+..|=+|.|.|...+=. +-|+..-|.|...+
T Consensus 48 gtF~QRvtLlHk~~drPtV~~T~GY~~~~~p~r~Ept~Ll--d~NQl~vEhRfF~~SrP~p~DW~-~Lti~QAA~D~Hri 124 (448)
T PF05576_consen 48 GTFQQRVTLLHKDFDRPTVLYTEGYNVSTSPRRSEPTQLL--DGNQLSVEHRFFGPSRPEPADWS-YLTIWQAASDQHRI 124 (448)
T ss_pred CceEEEEEEEEcCCCCCeEEEecCcccccCccccchhHhh--ccceEEEEEeeccCCCCCCCCcc-cccHhHhhHHHHHH
Confidence 344455666666777788888889876543222 222222 36788999999999987543322 34799999999999
Q ss_pred HHHhC---CCceEEEEeChhHHHHHHHHHhCCccccceeeecCC
Q 045774 88 LDALE---IDRCAFVGHSVSAMIGLLAAIHRPNLFSRLILIGGS 128 (275)
Q Consensus 88 l~~l~---~~~~~lvGhS~GG~val~~a~~~p~~v~~lvli~~~ 128 (275)
++++. .++-+==|-|=|||.++.+=..||+.|.+.|.--+.
T Consensus 125 ~~A~K~iY~~kWISTG~SKGGmTa~y~rrFyP~DVD~tVaYVAP 168 (448)
T PF05576_consen 125 VQAFKPIYPGKWISTGGSKGGMTAVYYRRFYPDDVDGTVAYVAP 168 (448)
T ss_pred HHHHHhhccCCceecCcCCCceeEEEEeeeCCCCCCeeeeeecc
Confidence 88884 256777899999999999888899999999876543
No 228
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=92.13 E-value=0.61 Score=40.05 Aligned_cols=60 Identities=22% Similarity=0.044 Sum_probs=37.1
Q ss_pred CEEEEEccC-CCCCCCCCCCCcccccchhHHHHHHHHHHHHh-------CCCceEEEEeChhHHHHHHHH
Q 045774 51 YRVISFDLM-CSGSCDPTNYDFQRYATLDGYVDDLLSFLDAL-------EIDRCAFVGHSVSAMIGLLAA 112 (275)
Q Consensus 51 ~~via~Dl~-G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l-------~~~~~~lvGhS~GG~val~~a 112 (275)
.+|+-+|.| |.|.|-.... ..+.+=+..|+|+..+|... ...++.|.|-|+||.-+-.+|
T Consensus 2 aNvLfiDqPvGvGfSy~~~~--~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la 69 (319)
T PLN02213 2 ANIIFLDQPVGSGFSYSKTP--IDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALV 69 (319)
T ss_pred ccEEEecCCCCCCCCCCCCC--CCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHH
Confidence 368999999 9999842211 11111123446665555532 345799999999998654444
No 229
>PLN02209 serine carboxypeptidase
Probab=90.96 E-value=0.8 Score=41.11 Aligned_cols=103 Identities=17% Similarity=0.103 Sum_probs=60.2
Q ss_pred CceEEEEcCCCCChhhhhhhHH----------------Hh-------hcCCEEEEEccC-CCCCCCCCCCCcccccchhH
Q 045774 24 QSIIVFSHGFGSDQSVWSRVIP----------------SF-------TRAYRVISFDLM-CSGSCDPTNYDFQRYATLDG 79 (275)
Q Consensus 24 ~~~ivllHG~~~~~~~w~~~~~----------------~l-------~~~~~via~Dl~-G~G~S~~~~~~~~~~~~~~~ 79 (275)
.|.|+++-|-++.+..+..+.+ .+ .+..+++-+|+| |.|.|-.... ..+.+-+.
T Consensus 68 ~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~--~~~~~~~~ 145 (437)
T PLN02209 68 DPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKTANIIFLDQPVGSGFSYSKTP--IERTSDTS 145 (437)
T ss_pred CCEEEEECCCCcHHHhhhHHHhcCCceeccCCCCCCcccceeCCCchhhcCcEEEecCCCCCCccCCCCC--CCccCCHH
Confidence 4789999986555555533221 11 123579999966 9998842111 11122334
Q ss_pred HHHHHHHHHHHh-------CCCceEEEEeChhHHHHHHHHHh---CC-------ccccceeeecCC
Q 045774 80 YVDDLLSFLDAL-------EIDRCAFVGHSVSAMIGLLAAIH---RP-------NLFSRLILIGGS 128 (275)
Q Consensus 80 ~a~dl~~~l~~l-------~~~~~~lvGhS~GG~val~~a~~---~p-------~~v~~lvli~~~ 128 (275)
.++|+.+++... ...++.|.|.|+||.-+-.+|.. .. =.++++++.++.
T Consensus 146 ~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~ 211 (437)
T PLN02209 146 EVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNPI 211 (437)
T ss_pred HHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecCcc
Confidence 556666666543 23479999999999865544432 11 135677776653
No 230
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=90.90 E-value=0.85 Score=40.90 Aligned_cols=75 Identities=20% Similarity=0.103 Sum_probs=43.0
Q ss_pred CEEEEEccC-CCCCCCCCCCCcccccchhHHHHHHHHHHHH----h---CCCceEEEEeChhHHHHHHHHHh----C---
Q 045774 51 YRVISFDLM-CSGSCDPTNYDFQRYATLDGYVDDLLSFLDA----L---EIDRCAFVGHSVSAMIGLLAAIH----R--- 115 (275)
Q Consensus 51 ~~via~Dl~-G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~----l---~~~~~~lvGhS~GG~val~~a~~----~--- 115 (275)
.+++-+|.| |.|.|...... ....+. ..|+++.+++.. . ...++.|.|.|+||..+-.+|.. .
T Consensus 116 anllfiDqPvGtGfSy~~~~~-~~~~d~-~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~ 193 (433)
T PLN03016 116 ANIIFLDQPVGSGFSYSKTPI-DKTGDI-SEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYIC 193 (433)
T ss_pred CcEEEecCCCCCCccCCCCCC-CccCCH-HHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccc
Confidence 579999966 99998422111 101111 223444444443 2 33579999999999865544432 1
Q ss_pred ---CccccceeeecC
Q 045774 116 ---PNLFSRLILIGG 127 (275)
Q Consensus 116 ---p~~v~~lvli~~ 127 (275)
+=.++++++-++
T Consensus 194 ~~~~inLkGi~iGNg 208 (433)
T PLN03016 194 CEPPINLQGYMLGNP 208 (433)
T ss_pred cCCcccceeeEecCC
Confidence 114667776655
No 231
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=90.89 E-value=0.36 Score=38.33 Aligned_cols=101 Identities=19% Similarity=0.216 Sum_probs=58.5
Q ss_pred ceEEEEcCCCCC-hhhhhh-h-----------H----HHhhcCCEEEEEccCC---CCCCCCCCCCcccc-cchhHHHHH
Q 045774 25 SIIVFSHGFGSD-QSVWSR-V-----------I----PSFTRAYRVISFDLMC---SGSCDPTNYDFQRY-ATLDGYVDD 83 (275)
Q Consensus 25 ~~ivllHG~~~~-~~~w~~-~-----------~----~~l~~~~~via~Dl~G---~G~S~~~~~~~~~~-~~~~~~a~d 83 (275)
..+|||||.|-- +.-|.. + + ...+.+|-|+...--- +-.+.. . +..| .|-.+.+.-
T Consensus 102 kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~--n-p~kyirt~veh~~y 178 (297)
T KOG3967|consen 102 KLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKR--N-PQKYIRTPVEHAKY 178 (297)
T ss_pred ceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhccc--C-cchhccchHHHHHH
Confidence 479999998743 455632 1 1 2345578888875331 111111 0 1111 112222222
Q ss_pred H-HHHHHHhCCCceEEEEeChhHHHHHHHHHhCCc--cccceeeecCC
Q 045774 84 L-LSFLDALEIDRCAFVGHSVSAMIGLLAAIHRPN--LFSRLILIGGS 128 (275)
Q Consensus 84 l-~~~l~~l~~~~~~lvGhS~GG~val~~a~~~p~--~v~~lvli~~~ 128 (275)
+ ..++.....+.+.+|.||+||...+.+..++|+ +|.++.+.++.
T Consensus 179 vw~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~ 226 (297)
T KOG3967|consen 179 VWKNIVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSA 226 (297)
T ss_pred HHHHHhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeeccc
Confidence 1 223334456789999999999999999999985 56666666543
No 232
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=90.82 E-value=1.1 Score=40.14 Aligned_cols=61 Identities=21% Similarity=0.248 Sum_probs=45.7
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHHHHcC--------------CC----------ccEEEcCCCCCCCCCCChHHHHHHHH
Q 045774 213 RVPVCIIQSSVDLSVPPAVAEYMRRHLG--------------GP----------TVLEFLPTHGHLPHVSSPAPVANAIQ 268 (275)
Q Consensus 213 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~--------------~~----------~~~~~i~~~gH~~~~e~p~~~~~~i~ 268 (275)
..++++..|+.|.++|.-..+...+.+. +. .....+.+|||+++.++|+.....+.
T Consensus 363 ~~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tVrGaGH~VP~~~p~~al~m~~ 442 (454)
T KOG1282|consen 363 GYRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATVRGAGHMVPYDKPESALIMFQ 442 (454)
T ss_pred ceEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEEEEeCCcccCCCCCcHHHHHHHH
Confidence 3899999999999999766554322110 00 12245679999999999999999999
Q ss_pred HHHHh
Q 045774 269 QLLRR 273 (275)
Q Consensus 269 ~fl~~ 273 (275)
+|+.+
T Consensus 443 ~fl~g 447 (454)
T KOG1282|consen 443 RFLNG 447 (454)
T ss_pred HHHcC
Confidence 99976
No 233
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=90.19 E-value=1.4 Score=40.76 Aligned_cols=52 Identities=19% Similarity=0.242 Sum_probs=32.8
Q ss_pred hhHHHHH---HHHHHHHhC--CCceEEEEeChhHHHHHHHHHh--CCccccceeeecCC
Q 045774 77 LDGYVDD---LLSFLDALE--IDRCAFVGHSVSAMIGLLAAIH--RPNLFSRLILIGGS 128 (275)
Q Consensus 77 ~~~~a~d---l~~~l~~l~--~~~~~lvGhS~GG~val~~a~~--~p~~v~~lvli~~~ 128 (275)
+.|+... +.+-+...| .++++|.|||-||+.+..+... ....+.+.|..+++
T Consensus 173 l~Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~ 231 (545)
T KOG1516|consen 173 LFDQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGN 231 (545)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhccc
Confidence 4455444 334444554 3579999999999998766532 12456677766654
No 234
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=90.13 E-value=0.9 Score=40.81 Aligned_cols=87 Identities=17% Similarity=0.235 Sum_probs=51.6
Q ss_pred CceEEEEcC-CCCChhh--hhhhHH--------Hhh-------cCCEEEEEccC-CCCCCCC-CCCCcccccchhHHHHH
Q 045774 24 QSIIVFSHG-FGSDQSV--WSRVIP--------SFT-------RAYRVISFDLM-CSGSCDP-TNYDFQRYATLDGYVDD 83 (275)
Q Consensus 24 ~~~ivllHG-~~~~~~~--w~~~~~--------~l~-------~~~~via~Dl~-G~G~S~~-~~~~~~~~~~~~~~a~d 83 (275)
+|.||++-| .|||+-. +.++-+ .|. +.-+++.+|.| |.|.|-. ...+.. .+-+.-|+|
T Consensus 73 dPlvLWLnGGPGCSSl~G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiLfLd~PvGvGFSYs~~~~~~~--~~D~~~A~d 150 (454)
T KOG1282|consen 73 DPLVLWLNGGPGCSSLGGLFEENGPFRVKYNGKTLYLNPYSWNKEANILFLDQPVGVGFSYSNTSSDYK--TGDDGTAKD 150 (454)
T ss_pred CCEEEEeCCCCCccchhhhhhhcCCeEEcCCCCcceeCCccccccccEEEEecCCcCCccccCCCCcCc--CCcHHHHHH
Confidence 568999997 5666532 111111 111 12369999999 9998832 111111 234566666
Q ss_pred HHHHHHHh-------CCCceEEEEeChhHHHHHHHH
Q 045774 84 LLSFLDAL-------EIDRCAFVGHSVSAMIGLLAA 112 (275)
Q Consensus 84 l~~~l~~l-------~~~~~~lvGhS~GG~val~~a 112 (275)
...+|.+. ...++.+.|-|++|..+=.+|
T Consensus 151 ~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La 186 (454)
T KOG1282|consen 151 NYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALA 186 (454)
T ss_pred HHHHHHHHHHhChhhcCCCeEEecccccceehHHHH
Confidence 66665533 345799999999997654444
No 235
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=87.35 E-value=0.92 Score=37.77 Aligned_cols=33 Identities=24% Similarity=0.176 Sum_probs=23.9
Q ss_pred HHHHHHHhCCCceEEEEeChhHHHHHHHHHhCC
Q 045774 84 LLSFLDALEIDRCAFVGHSVSAMIGLLAAIHRP 116 (275)
Q Consensus 84 l~~~l~~l~~~~~~lvGhS~GG~val~~a~~~p 116 (275)
+.++.+..-..++.|-|||+||++|..+..++.
T Consensus 266 ~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T COG5153 266 LGAVRRIYPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred HHHHHHhCCCceEEEeccccchHHHHHhccccC
Confidence 333334334457888899999999999887764
No 236
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=87.35 E-value=0.92 Score=37.77 Aligned_cols=33 Identities=24% Similarity=0.176 Sum_probs=23.9
Q ss_pred HHHHHHHhCCCceEEEEeChhHHHHHHHHHhCC
Q 045774 84 LLSFLDALEIDRCAFVGHSVSAMIGLLAAIHRP 116 (275)
Q Consensus 84 l~~~l~~l~~~~~~lvGhS~GG~val~~a~~~p 116 (275)
+.++.+..-..++.|-|||+||++|..+..++.
T Consensus 266 ~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T KOG4540|consen 266 LGAVRRIYPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred HHHHHHhCCCceEEEeccccchHHHHHhccccC
Confidence 333334334457888899999999999887764
No 237
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=87.22 E-value=4 Score=35.53 Aligned_cols=84 Identities=20% Similarity=0.247 Sum_probs=63.9
Q ss_pred eEEEEcCCCCCh-------hhhhhhHHHhhcCCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhCCCceEE
Q 045774 26 IIVFSHGFGSDQ-------SVWSRVIPSFTRAYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALEIDRCAF 98 (275)
Q Consensus 26 ~ivllHG~~~~~-------~~w~~~~~~l~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~l 98 (275)
.||++||-+.++ +.|+.+++.++++--+-.+|+.=.|.-+ .+++-+.-+..++... +-.+
T Consensus 173 ~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~----------GleeDa~~lR~~a~~~---~~~l 239 (396)
T COG1448 173 SVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFAD----------GLEEDAYALRLFAEVG---PELL 239 (396)
T ss_pred CEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhcc----------chHHHHHHHHHHHHhC---CcEE
Confidence 699999977654 8999999999988888899988666432 2666676677666542 2389
Q ss_pred EEeChhHHHHHHHHHhCCccccceeeecC
Q 045774 99 VGHSVSAMIGLLAAIHRPNLFSRLILIGG 127 (275)
Q Consensus 99 vGhS~GG~val~~a~~~p~~v~~lvli~~ 127 (275)
|..|.-=..++ |.+||-++.+++.
T Consensus 240 va~S~SKnfgL-----YgERVGa~~vva~ 263 (396)
T COG1448 240 VASSFSKNFGL-----YGERVGALSVVAE 263 (396)
T ss_pred EEehhhhhhhh-----hhhccceeEEEeC
Confidence 99998766654 6899999988854
No 238
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=86.50 E-value=6.5 Score=36.37 Aligned_cols=95 Identities=15% Similarity=0.212 Sum_probs=57.7
Q ss_pred EEcCCCCC----hhhhhhhHHH-hhcCCEEEEEccCCCCCCCCCCCC----cccccchhHHHHHHHHHHHHhCC---Cce
Q 045774 29 FSHGFGSD----QSVWSRVIPS-FTRAYRVISFDLMCSGSCDPTNYD----FQRYATLDGYVDDLLSFLDALEI---DRC 96 (275)
Q Consensus 29 llHG~~~~----~~~w~~~~~~-l~~~~~via~Dl~G~G~S~~~~~~----~~~~~~~~~~a~dl~~~l~~l~~---~~~ 96 (275)
||||.|+- ...|...+.. |.++.--+...+||=|.=.|.-+. ..+-..++|+++-+..++++ |+ +++
T Consensus 424 ll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEfGp~WH~Aa~k~nrq~vfdDf~AVaedLi~r-gitspe~l 502 (648)
T COG1505 424 LLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEFGPEWHQAGMKENKQNVFDDFIAVAEDLIKR-GITSPEKL 502 (648)
T ss_pred EEEeccccccccCCccchhhHHHHhcCCeEEEEecccCCccCHHHHHHHhhhcchhhhHHHHHHHHHHHHh-CCCCHHHh
Confidence 45554432 3455555544 455666677789988754331100 00001355555544444432 44 467
Q ss_pred EEEEeChhHHHHHHHHHhCCccccceee
Q 045774 97 AFVGHSVSAMIGLLAAIHRPNLFSRLIL 124 (275)
Q Consensus 97 ~lvGhS~GG~val~~a~~~p~~v~~lvl 124 (275)
-+-|-|-||.+.-.+..++||.+.++|.
T Consensus 503 gi~GgSNGGLLvg~alTQrPelfgA~v~ 530 (648)
T COG1505 503 GIQGGSNGGLLVGAALTQRPELFGAAVC 530 (648)
T ss_pred hhccCCCCceEEEeeeccChhhhCceee
Confidence 8899999999988888899999888875
No 239
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=85.76 E-value=1.1 Score=41.07 Aligned_cols=34 Identities=24% Similarity=0.433 Sum_probs=22.2
Q ss_pred hhHHHHHHHHHHHHhCC---CceEEEEeChhHHHHHH
Q 045774 77 LDGYVDDLLSFLDALEI---DRCAFVGHSVSAMIGLL 110 (275)
Q Consensus 77 ~~~~a~dl~~~l~~l~~---~~~~lvGhS~GG~val~ 110 (275)
+..=+..+.+.+.+.++ .+++.|||||||..+=.
T Consensus 506 l~~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~ 542 (697)
T KOG2029|consen 506 LAARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKK 542 (697)
T ss_pred HHHHHHHHHHHHHHhccCCCCceEEEecccchHHHHH
Confidence 44444445555554443 46999999999988743
No 240
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=84.06 E-value=0.87 Score=39.02 Aligned_cols=29 Identities=34% Similarity=0.472 Sum_probs=24.5
Q ss_pred HHHHHHHhCCCceEEEEeChhHHHHHHHH
Q 045774 84 LLSFLDALEIDRCAFVGHSVSAMIGLLAA 112 (275)
Q Consensus 84 l~~~l~~l~~~~~~lvGhS~GG~val~~a 112 (275)
+.++++..|+++..++|||+|=+.|+.++
T Consensus 74 l~~~l~~~Gi~P~~v~GhSlGE~aA~~aa 102 (318)
T PF00698_consen 74 LARLLRSWGIKPDAVIGHSLGEYAALVAA 102 (318)
T ss_dssp HHHHHHHTTHCESEEEESTTHHHHHHHHT
T ss_pred hhhhhcccccccceeeccchhhHHHHHHC
Confidence 55677888999999999999999887664
No 241
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=83.56 E-value=1.4 Score=37.11 Aligned_cols=30 Identities=23% Similarity=0.266 Sum_probs=24.8
Q ss_pred HHHHHHHhCCCceEEEEeChhHHHHHHHHH
Q 045774 84 LLSFLDALEIDRCAFVGHSVSAMIGLLAAI 113 (275)
Q Consensus 84 l~~~l~~l~~~~~~lvGhS~GG~val~~a~ 113 (275)
+.+++..+|+++-.++|||+|-+.|+.++.
T Consensus 72 ~~~~l~~~Gi~p~~~~GhSlGE~aA~~~ag 101 (298)
T smart00827 72 LARLWRSWGVRPDAVVGHSLGEIAAAYVAG 101 (298)
T ss_pred HHHHHHHcCCcccEEEecCHHHHHHHHHhC
Confidence 445667889999999999999999887654
No 242
>PRK12467 peptide synthase; Provisional
Probab=82.02 E-value=6.3 Score=45.57 Aligned_cols=98 Identities=9% Similarity=-0.002 Sum_probs=69.1
Q ss_pred ceEEEEcCCCCChhhhhhhHHHhhcCCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhC-CCceEEEEeCh
Q 045774 25 SIIVFSHGFGSDQSVWSRVIPSFTRAYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALE-IDRCAFVGHSV 103 (275)
Q Consensus 25 ~~ivllHG~~~~~~~w~~~~~~l~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~-~~~~~lvGhS~ 103 (275)
+.+++.|....+...+..+...+.....++.+..++.-.-. ....+++.++....+.+.... ..+..+.|+|+
T Consensus 3693 ~~l~~~h~~~r~~~~~~~l~~~l~~~~~~~~l~~~~~~~d~------~~~~~~~~~~~~y~~~~~~~~~~~p~~l~g~s~ 3766 (3956)
T PRK12467 3693 PALFCRHEGLGTVFDYEPLAVILEGDRHVLGLTCRHLLDDG------WQDTSLQAMAVQYADYILWQQAKGPYGLLGWSL 3766 (3956)
T ss_pred cceeeechhhcchhhhHHHHHHhCCCCcEEEEecccccccc------CCccchHHHHHHHHHHHHHhccCCCeeeeeeec
Confidence 45999999888877788887788777888888766542111 112357888888877776654 35799999999
Q ss_pred hHHHHHHHHHh---CCccccceeeecCC
Q 045774 104 SAMIGLLAAIH---RPNLFSRLILIGGS 128 (275)
Q Consensus 104 GG~val~~a~~---~p~~v~~lvli~~~ 128 (275)
||.++.+++.. .-+.+.-+.+++..
T Consensus 3767 g~~~a~~~~~~l~~~g~~~~~~~~~~~~ 3794 (3956)
T PRK12467 3767 GGTLARLVAELLEREGESEAFLGLFDNT 3794 (3956)
T ss_pred chHHHHHHHHHHHHcCCceeEEEEEecc
Confidence 99999877653 44556666666543
No 243
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=81.72 E-value=1.9 Score=36.41 Aligned_cols=30 Identities=27% Similarity=0.076 Sum_probs=24.7
Q ss_pred HHHHHHHhCCCceEEEEeChhHHHHHHHHH
Q 045774 84 LLSFLDALEIDRCAFVGHSVSAMIGLLAAI 113 (275)
Q Consensus 84 l~~~l~~l~~~~~~lvGhS~GG~val~~a~ 113 (275)
+.+++.+.|+++..++|||+|=+.|+.++.
T Consensus 66 l~~~l~~~g~~P~~v~GhS~GE~aAa~~aG 95 (295)
T TIGR03131 66 AWRALLALLPRPSAVAGYSVGEYAAAVVAG 95 (295)
T ss_pred HHHHHHhcCCCCcEEeecCHHHHHHHHHhC
Confidence 455667789999999999999999887653
No 244
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=81.56 E-value=32 Score=29.18 Aligned_cols=99 Identities=19% Similarity=0.267 Sum_probs=64.9
Q ss_pred ceEEEEcCC-CCChhhhhhhHHHhhcCCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhCCCceEEEEeC-
Q 045774 25 SIIVFSHGF-GSDQSVWSRVIPSFTRAYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALEIDRCAFVGHS- 102 (275)
Q Consensus 25 ~~ivllHG~-~~~~~~w~~~~~~l~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS- 102 (275)
|.||++--. |..+..-+..++.|.....|+.-||..--.-.- .... .+++++.+-+.+++..+|.+ +++++-.
T Consensus 104 PkvLivapmsGH~aTLLR~TV~alLp~~~vyitDW~dAr~Vp~---~~G~-FdldDYIdyvie~~~~~Gp~-~hv~aVCQ 178 (415)
T COG4553 104 PKVLIVAPMSGHYATLLRGTVEALLPYHDVYITDWVDARMVPL---EAGH-FDLDDYIDYVIEMINFLGPD-AHVMAVCQ 178 (415)
T ss_pred CeEEEEecccccHHHHHHHHHHHhccccceeEeeccccceeec---ccCC-ccHHHHHHHHHHHHHHhCCC-CcEEEEec
Confidence 345555444 333455556667777778899999875432211 1112 25999999999999999866 5555544
Q ss_pred ----hhHHHHHHHHHhCCccccceeeecCC
Q 045774 103 ----VSAMIGLLAAIHRPNLFSRLILIGGS 128 (275)
Q Consensus 103 ----~GG~val~~a~~~p~~v~~lvli~~~ 128 (275)
.=+++++..+...|..-+++++++++
T Consensus 179 P~vPvLAAisLM~~~~~p~~PssMtlmGgP 208 (415)
T COG4553 179 PTVPVLAAISLMEEDGDPNVPSSMTLMGGP 208 (415)
T ss_pred CCchHHHHHHHHHhcCCCCCCceeeeecCc
Confidence 33556666666788888999998764
No 245
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=80.16 E-value=2.2 Score=35.85 Aligned_cols=30 Identities=27% Similarity=0.191 Sum_probs=24.0
Q ss_pred HHHHHHHhC-CCceEEEEeChhHHHHHHHHH
Q 045774 84 LLSFLDALE-IDRCAFVGHSVSAMIGLLAAI 113 (275)
Q Consensus 84 l~~~l~~l~-~~~~~lvGhS~GG~val~~a~ 113 (275)
+.+++...+ +++..++|||+|=+.|+.++.
T Consensus 72 l~~~l~~~g~i~p~~v~GhS~GE~aAa~~aG 102 (290)
T TIGR00128 72 LYLKLKEQGGLKPDFAAGHSLGEYSALVAAG 102 (290)
T ss_pred HHHHHHHcCCCCCCEEeecCHHHHHHHHHhC
Confidence 445566777 999999999999999887664
No 246
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=78.27 E-value=5.1 Score=36.30 Aligned_cols=39 Identities=18% Similarity=0.294 Sum_probs=29.5
Q ss_pred HhCCCceEEEEeChhHHHHHHHHHh-----CCccccceeeecCC
Q 045774 90 ALEIDRCAFVGHSVSAMIGLLAAIH-----RPNLFSRLILIGGS 128 (275)
Q Consensus 90 ~l~~~~~~lvGhS~GG~val~~a~~-----~p~~v~~lvli~~~ 128 (275)
.+|.+++.|||.|+|+-+...+... .-+.|..+++++++
T Consensus 443 ~qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaP 486 (633)
T KOG2385|consen 443 SQGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAP 486 (633)
T ss_pred ccCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCC
Confidence 3477899999999999998755432 34568888888764
No 247
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=77.50 E-value=7 Score=30.81 Aligned_cols=61 Identities=15% Similarity=0.216 Sum_probs=42.0
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHHHH---cCCC-ccEEEcCCCCCCCCCCCh---HHHHHHHHHHHHh
Q 045774 213 RVPVCIIQSSVDLSVPPAVAEYMRRH---LGGP-TVLEFLPTHGHLPHVSSP---APVANAIQQLLRR 273 (275)
Q Consensus 213 ~~P~l~i~G~~D~~~~~~~~~~~~~~---~~~~-~~~~~i~~~gH~~~~e~p---~~~~~~i~~fl~~ 273 (275)
+++++-|-|+.|.++.....+.-.+. +|.. ..-++.++|||.-...=+ +++.-.|++|+..
T Consensus 134 ~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~ 201 (202)
T PF06850_consen 134 RTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQ 201 (202)
T ss_pred cceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHh
Confidence 57778899999999877654433333 4432 245567899999666554 5677788888764
No 248
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=77.07 E-value=7.1 Score=31.69 Aligned_cols=39 Identities=15% Similarity=0.055 Sum_probs=28.0
Q ss_pred chhHHHHHHHHHHHHh--CCCceEEEEeChhHHHHHHHHHh
Q 045774 76 TLDGYVDDLLSFLDAL--EIDRCAFVGHSVSAMIGLLAAIH 114 (275)
Q Consensus 76 ~~~~~a~dl~~~l~~l--~~~~~~lvGhS~GG~val~~a~~ 114 (275)
|+.+=++.+.+.++.. ..++++++|+|.|+.|+..++.+
T Consensus 28 Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~ 68 (225)
T PF08237_consen 28 SVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRR 68 (225)
T ss_pred HHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHH
Confidence 4566666666666542 34679999999999999776544
No 249
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=77.02 E-value=4.8 Score=36.65 Aligned_cols=84 Identities=19% Similarity=0.215 Sum_probs=57.5
Q ss_pred hHHHhhcCCEEEEEccCCCCCCCC----CC-CCccc-----ccchhHHHHHHHHHHHHh-C--CCceEEEEeChhHHHHH
Q 045774 43 VIPSFTRAYRVISFDLMCSGSCDP----TN-YDFQR-----YATLDGYVDDLLSFLDAL-E--IDRCAFVGHSVSAMIGL 109 (275)
Q Consensus 43 ~~~~l~~~~~via~Dl~G~G~S~~----~~-~~~~~-----~~~~~~~a~dl~~~l~~l-~--~~~~~lvGhS~GG~val 109 (275)
+...++.+|-+++=| -||..+.. .. .+.+. +.++.+.+.--++++++. + .+.-...|-|-||.-+|
T Consensus 52 ~~~~~~~G~A~~~TD-~Gh~~~~~~~~~~~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl 130 (474)
T PF07519_consen 52 MATALARGYATASTD-SGHQGSAGSDDASFGNNPEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGL 130 (474)
T ss_pred cchhhhcCeEEEEec-CCCCCCcccccccccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHH
Confidence 456788889999888 57765532 10 11110 223444444455566544 3 45689999999999999
Q ss_pred HHHHhCCccccceeeecC
Q 045774 110 LAAIHRPNLFSRLILIGG 127 (275)
Q Consensus 110 ~~a~~~p~~v~~lvli~~ 127 (275)
..|.+||+...+++.-++
T Consensus 131 ~~AQryP~dfDGIlAgaP 148 (474)
T PF07519_consen 131 MAAQRYPEDFDGILAGAP 148 (474)
T ss_pred HHHHhChhhcCeEEeCCc
Confidence 999999999999987654
No 250
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=76.99 E-value=6.9 Score=27.30 Aligned_cols=85 Identities=11% Similarity=0.071 Sum_probs=54.3
Q ss_pred hhhhhhhHHHhhc-CCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhCCCceEEEEeChhHHHHH--HHHH
Q 045774 37 QSVWSRVIPSFTR-AYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALEIDRCAFVGHSVSAMIGL--LAAI 113 (275)
Q Consensus 37 ~~~w~~~~~~l~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~GG~val--~~a~ 113 (275)
...|..+.+.+.. ++..=.+.++..|.+....... ..-+-=.+.+..+++..-..+++|||=|--.-.-. .+|.
T Consensus 10 wnly~~l~~Fl~~~~~P~G~~~Lr~~~~~~~~~~~~---~~~~~K~~~i~~i~~~fP~~kfiLIGDsgq~DpeiY~~ia~ 86 (100)
T PF09949_consen 10 WNLYPFLRDFLRRNGFPAGPLLLRDYGPSLSGLFKS---GAEEHKRDNIERILRDFPERKFILIGDSGQHDPEIYAEIAR 86 (100)
T ss_pred HHHHHHHHHHHHhcCCCCCceEcccCCccccccccC---CchhHHHHHHHHHHHHCCCCcEEEEeeCCCcCHHHHHHHHH
Confidence 3445555566654 4766667777776653211000 00122345677788888888999999987766544 5788
Q ss_pred hCCccccceee
Q 045774 114 HRPNLFSRLIL 124 (275)
Q Consensus 114 ~~p~~v~~lvl 124 (275)
++|++|.++.+
T Consensus 87 ~~P~~i~ai~I 97 (100)
T PF09949_consen 87 RFPGRILAIYI 97 (100)
T ss_pred HCCCCEEEEEE
Confidence 99999998854
No 251
>PRK10279 hypothetical protein; Provisional
Probab=73.39 E-value=3.1 Score=35.35 Aligned_cols=35 Identities=20% Similarity=0.312 Sum_probs=28.1
Q ss_pred HHHHHHHhCCCceEEEEeChhHHHHHHHHHhCCcc
Q 045774 84 LLSFLDALEIDRCAFVGHSVSAMIGLLAAIHRPNL 118 (275)
Q Consensus 84 l~~~l~~l~~~~~~lvGhS~GG~val~~a~~~p~~ 118 (275)
+.+.+++.++..-.++|-|+|+.++..+|....+.
T Consensus 23 VL~aL~E~gi~~d~i~GtS~GAlvga~yA~g~~~~ 57 (300)
T PRK10279 23 VINALKKVGIEIDIVAGCSIGSLVGAAYACDRLSA 57 (300)
T ss_pred HHHHHHHcCCCcCEEEEEcHHHHHHHHHHcCChHH
Confidence 55566667899899999999999999888765443
No 252
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=72.86 E-value=5.4 Score=30.69 Aligned_cols=34 Identities=21% Similarity=0.096 Sum_probs=26.3
Q ss_pred HHHHHHHHhCCCceEEEEeChhHHHHHHHHHhCC
Q 045774 83 DLLSFLDALEIDRCAFVGHSVSAMIGLLAAIHRP 116 (275)
Q Consensus 83 dl~~~l~~l~~~~~~lvGhS~GG~val~~a~~~p 116 (275)
-+.+.+++.++..-.++|-|.|+.++..++...+
T Consensus 15 Gvl~aL~e~gi~~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 15 GVAKALRERGPLIDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred HHHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCC
Confidence 3455555568888899999999999988886543
No 253
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=72.50 E-value=5.9 Score=33.80 Aligned_cols=33 Identities=30% Similarity=0.339 Sum_probs=27.2
Q ss_pred HHHHHHHHhCCCceEEEEeChhHHHHHHHHHhC
Q 045774 83 DLLSFLDALEIDRCAFVGHSVSAMIGLLAAIHR 115 (275)
Q Consensus 83 dl~~~l~~l~~~~~~lvGhS~GG~val~~a~~~ 115 (275)
=+.+.+++.|+..-.++|-|+|+.++..+|..+
T Consensus 32 GvL~aLee~gi~~d~v~GtSaGAi~ga~ya~g~ 64 (306)
T cd07225 32 GVIKALEEAGIPVDMVGGTSIGAFIGALYAEER 64 (306)
T ss_pred HHHHHHHHcCCCCCEEEEECHHHHHHHHHHcCC
Confidence 366667777888889999999999999888754
No 254
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=70.87 E-value=6 Score=30.96 Aligned_cols=32 Identities=25% Similarity=0.233 Sum_probs=24.6
Q ss_pred HHHHHHHhCCCceEEEEeChhHHHHHHHHHhC
Q 045774 84 LLSFLDALEIDRCAFVGHSVSAMIGLLAAIHR 115 (275)
Q Consensus 84 l~~~l~~l~~~~~~lvGhS~GG~val~~a~~~ 115 (275)
+.+.+++.++..-.++|-|.|+.+|..++..+
T Consensus 17 vl~~L~e~~~~~d~i~GtSaGai~aa~~a~g~ 48 (194)
T cd07207 17 ALKALEEAGILKKRVAGTSAGAITAALLALGY 48 (194)
T ss_pred HHHHHHHcCCCcceEEEECHHHHHHHHHHcCC
Confidence 34444556777789999999999999888644
No 255
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=70.69 E-value=15 Score=29.19 Aligned_cols=63 Identities=14% Similarity=0.027 Sum_probs=45.3
Q ss_pred CEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhCCCceEEEEeCh----hHHHHHHHHHhC-Cccccceeee
Q 045774 51 YRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALEIDRCAFVGHSV----SAMIGLLAAIHR-PNLFSRLILI 125 (275)
Q Consensus 51 ~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~----GG~val~~a~~~-p~~v~~lvli 125 (275)
-+|+..|.++... ++.+.+++.+.+++++.+ -.++|+|||. |..++-.+|.+- -..+..++-+
T Consensus 78 d~V~~~~~~~~~~-----------~~~e~~a~al~~~i~~~~-p~lVL~~~t~~~~~grdlaprlAarLga~lvsdv~~l 145 (202)
T cd01714 78 DRAILVSDRAFAG-----------ADTLATAKALAAAIKKIG-VDLILTGKQSIDGDTGQVGPLLAELLGWPQITYVSKI 145 (202)
T ss_pred CEEEEEecccccC-----------CChHHHHHHHHHHHHHhC-CCEEEEcCCcccCCcCcHHHHHHHHhCCCccceEEEE
Confidence 4788887665432 246889999999998877 6799999999 778887766553 3355555554
No 256
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=70.28 E-value=5.4 Score=36.83 Aligned_cols=32 Identities=19% Similarity=0.027 Sum_probs=25.6
Q ss_pred HHHHH-HHhCCCceEEEEeChhHHHHHHHHHhC
Q 045774 84 LLSFL-DALEIDRCAFVGHSVSAMIGLLAAIHR 115 (275)
Q Consensus 84 l~~~l-~~l~~~~~~lvGhS~GG~val~~a~~~ 115 (275)
+.+++ +.+|+++-.++|||+|=+.|+..|--.
T Consensus 254 La~ll~~~~GI~Pdav~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 254 LTQLLCDEFAIKPDFALGYSKGEASMWASLGVW 286 (538)
T ss_pred HHHHHHHhcCCCCCEEeecCHHHHHHHHHhCCC
Confidence 45556 578999999999999999988776443
No 257
>PF03610 EIIA-man: PTS system fructose IIA component; InterPro: IPR004701 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) [, ] is a major carbohydrate transport system in bacteria. The PTS catalyses the phosphorylation of incoming sugar substrates and coupled with translocation across the cell membrane, makes the PTS a link between the uptake and metabolism of sugars. The general mechanism of the PTS is the following: a phosphoryl group from phosphoenolpyruvate (PEP) is transferred via a signal transduction pathway, to enzyme I (EI) which in turn transfers it to a phosphoryl carrier, the histidine protein (HPr). Phospho-HPr then transfers the phosphoryl group to a sugar-specific permease, a membrane-bound complex known as enzyme 2 (EII), which transports the sugar to the cell. EII consists of at least three structurally distinct domains IIA, IIB and IIC []. These can either be fused together in a single polypeptide chain or exist as two or three interactive chains, formerly called enzymes II (EII) and III (EIII). The first domain (IIA or EIIA) carries the first permease-specific phosphorylation site, a histidine which is phosphorylated by phospho-HPr. The second domain (IIB or EIIB) is phosphorylated by phospho-IIA on a cysteinyl or histidyl residue, depending on the sugar transported. Finally, the phosphoryl group is transferred from the IIB domain to the sugar substrate concomitantly with the sugar uptake processed by the IIC domain. This third domain (IIC or EIIC) forms the translocation channel and the specific substrate-binding site. An additional transmembrane domain IID, homologous to IIC, can be found in some PTSs, e.g. for mannose [, , , ]. The Man family is unique in several respects among PTS permease families. It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of Escherichia coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for IIA and IIB components.; GO: 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0016021 integral to membrane; PDB: 3GDW_B 2JZN_A 1VSQ_A 2JZO_B 1VRC_A 1PDO_A 3GX1_A 3B48_B 3BED_B 3IPR_C ....
Probab=69.72 E-value=37 Score=24.07 Aligned_cols=69 Identities=14% Similarity=0.109 Sum_probs=44.6
Q ss_pred eEEEEcCCCCChhhhhhhHHHhhcC--CEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhCCCc-eEEEEeC
Q 045774 26 IIVFSHGFGSDQSVWSRVIPSFTRA--YRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALEIDR-CAFVGHS 102 (275)
Q Consensus 26 ~ivllHG~~~~~~~w~~~~~~l~~~--~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~~~-~~lvGhS 102 (275)
.||.-|| .-+......+..+... -.+.++++... .+++++.+.+.+.+++.+-++ ++++-==
T Consensus 2 iii~sHG--~~A~g~~~~~~~i~G~~~~~i~~~~~~~~-------------~~~~~~~~~l~~~i~~~~~~~~vlil~Dl 66 (116)
T PF03610_consen 2 IIIASHG--SLAEGLLESAEMILGEDQDNIEAVDLYPD-------------ESIEDFEEKLEEAIEELDEGDGVLILTDL 66 (116)
T ss_dssp EEEEEET--THHHHHHHHHHHHHTSTCSSEEEEEETTT-------------SCHHHHHHHHHHHHHHCCTTSEEEEEESS
T ss_pred EEEEECc--HHHHHHHHHHHHHcCCCcccEEEEECcCC-------------CCHHHHHHHHHHHHHhccCCCcEEEEeeC
Confidence 5889999 4555566666655443 47888865422 258889999999998887554 5555544
Q ss_pred hhHHHHH
Q 045774 103 VSAMIGL 109 (275)
Q Consensus 103 ~GG~val 109 (275)
.||...-
T Consensus 67 ~ggsp~n 73 (116)
T PF03610_consen 67 GGGSPFN 73 (116)
T ss_dssp TTSHHHH
T ss_pred CCCccch
Confidence 4444433
No 258
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=69.49 E-value=6.8 Score=33.35 Aligned_cols=34 Identities=24% Similarity=0.229 Sum_probs=28.4
Q ss_pred HHHHHHHHhCCCceEEEEeChhHHHHHHHHHhCC
Q 045774 83 DLLSFLDALEIDRCAFVGHSVSAMIGLLAAIHRP 116 (275)
Q Consensus 83 dl~~~l~~l~~~~~~lvGhS~GG~val~~a~~~p 116 (275)
=+.+.|++.+++.-.+.|-|+|+.++..+|..+.
T Consensus 28 GVl~aL~e~gi~~~~iaGtS~GAiva~l~A~g~~ 61 (306)
T COG1752 28 GVLKALEEAGIPIDVIAGTSAGAIVAALYAAGMD 61 (306)
T ss_pred HHHHHHHHcCCCccEEEecCHHHHHHHHHHcCCC
Confidence 3667777888999999999999999988887544
No 259
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=67.56 E-value=9.8 Score=30.75 Aligned_cols=33 Identities=27% Similarity=0.328 Sum_probs=25.0
Q ss_pred HHHHHHHhCCCceEEEEeChhHHHHHHHHHhCC
Q 045774 84 LLSFLDALEIDRCAFVGHSVSAMIGLLAAIHRP 116 (275)
Q Consensus 84 l~~~l~~l~~~~~~lvGhS~GG~val~~a~~~p 116 (275)
+.+.+++.+++.-.++|-|.|+.+|..+|..++
T Consensus 18 vL~aL~e~gi~~~~i~GtSaGAi~aa~~a~g~~ 50 (221)
T cd07210 18 FLAALLEMGLEPSAISGTSAGALVGGLFASGIS 50 (221)
T ss_pred HHHHHHHcCCCceEEEEeCHHHHHHHHHHcCCC
Confidence 344445557787889999999999998886543
No 260
>cd00006 PTS_IIA_man PTS_IIA, PTS system, mannose/sorbose specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation. IIA subunits receive phosphoryl groups from HPr and transfer them to IIB subunits, which in turn phosphorylate the substrate.
Probab=67.53 E-value=43 Score=24.01 Aligned_cols=70 Identities=14% Similarity=0.110 Sum_probs=46.3
Q ss_pred eEEEEcCCCCChhhhhhhHHHhhc-CCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhCC-CceEEEEeCh
Q 045774 26 IIVFSHGFGSDQSVWSRVIPSFTR-AYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALEI-DRCAFVGHSV 103 (275)
Q Consensus 26 ~ivllHG~~~~~~~w~~~~~~l~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~-~~~~lvGhS~ 103 (275)
.|+.-|| .-+......+..+.. .-.+.++++... .+.+++.+.+.++++..+. +.++++-==+
T Consensus 3 ili~sHG--~~A~gi~~~~~~i~G~~~~i~~~~~~~~-------------~~~~~~~~~i~~~i~~~~~~~~viil~Dl~ 67 (122)
T cd00006 3 IIIATHG--GFASGLLNSAEMILGEQENVEAIDFPPG-------------ESPDDLLEKIKAALAELDSGEGVLILTDLF 67 (122)
T ss_pred EEEEcCH--HHHHHHHHHHHHhcCCCCCeEEEEeCCC-------------CCHHHHHHHHHHHHHHhCCCCcEEEEEeCC
Confidence 5788999 445656666666644 347778875532 2578888999999988865 4455555445
Q ss_pred hHHHHHH
Q 045774 104 SAMIGLL 110 (275)
Q Consensus 104 GG~val~ 110 (275)
||.+.-.
T Consensus 68 GGSp~n~ 74 (122)
T cd00006 68 GGSPNNA 74 (122)
T ss_pred CCCHHHH
Confidence 8877543
No 261
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=66.71 E-value=4.6 Score=36.15 Aligned_cols=39 Identities=15% Similarity=0.201 Sum_probs=29.9
Q ss_pred HHHHHHHhCCCceEEEEeChhHHHHHHHHHhCCccccce
Q 045774 84 LLSFLDALEIDRCAFVGHSVSAMIGLLAAIHRPNLFSRL 122 (275)
Q Consensus 84 l~~~l~~l~~~~~~lvGhS~GG~val~~a~~~p~~v~~l 122 (275)
+.+.+.+.++.+-+++|-|.|+.+|..++...++.+..+
T Consensus 91 VLkaL~E~gl~p~vIsGTSaGAivAal~as~~~eel~~~ 129 (421)
T cd07230 91 VLKALFEANLLPRIISGSSAGSIVAAILCTHTDEEIPEL 129 (421)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCHHHHHHH
Confidence 444444557777899999999999999988777765554
No 262
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=64.95 E-value=12 Score=31.90 Aligned_cols=90 Identities=12% Similarity=0.132 Sum_probs=58.4
Q ss_pred CCceEEEEcCC-CCChh---hhhhhHHHh---h-------cCCEEEEEccC-CCCCCCCCCCCcccc-cchhHHHHHHHH
Q 045774 23 GQSIIVFSHGF-GSDQS---VWSRVIPSF---T-------RAYRVISFDLM-CSGSCDPTNYDFQRY-ATLDGYVDDLLS 86 (275)
Q Consensus 23 g~~~ivllHG~-~~~~~---~w~~~~~~l---~-------~~~~via~Dl~-G~G~S~~~~~~~~~~-~~~~~~a~dl~~ 86 (275)
-.|..+.+.|- +.++. .|.++-+.- + +.-.++.+|-| |.|.|--... ..| .+....|.|+.+
T Consensus 30 ~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk~adllfvDnPVGaGfSyVdg~--~~Y~~~~~qia~Dl~~ 107 (414)
T KOG1283|consen 30 ERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLKDADLLFVDNPVGAGFSYVDGS--SAYTTNNKQIALDLVE 107 (414)
T ss_pred CCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhhhccEEEecCCCcCceeeecCc--ccccccHHHHHHHHHH
Confidence 34567778774 44543 344443321 1 12368999998 8888832110 112 368899999999
Q ss_pred HHHHh-------CCCceEEEEeChhHHHHHHHHHh
Q 045774 87 FLDAL-------EIDRCAFVGHSVSAMIGLLAAIH 114 (275)
Q Consensus 87 ~l~~l-------~~~~~~lvGhS~GG~val~~a~~ 114 (275)
+++.+ .-.++.++.-|+||-.|..++..
T Consensus 108 llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~ 142 (414)
T KOG1283|consen 108 LLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALE 142 (414)
T ss_pred HHHHHHhcCccccccceEEEEhhcccchhhhhhhh
Confidence 99866 22378999999999998776644
No 263
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=64.53 E-value=10 Score=31.70 Aligned_cols=31 Identities=29% Similarity=0.318 Sum_probs=25.8
Q ss_pred HHHHHHHhCCCceEEEEeChhHHHHHHHHHh
Q 045774 84 LLSFLDALEIDRCAFVGHSVSAMIGLLAAIH 114 (275)
Q Consensus 84 l~~~l~~l~~~~~~lvGhS~GG~val~~a~~ 114 (275)
+.+.+++.++.--.++|-|+|+.++..+|..
T Consensus 28 VL~aLeE~gi~~d~v~GtSaGAiiga~ya~g 58 (269)
T cd07227 28 ILQALEEAGIPIDAIGGTSIGSFVGGLYARE 58 (269)
T ss_pred HHHHHHHcCCCccEEEEECHHHHHHHHHHcC
Confidence 5556677788888999999999999888865
No 264
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=63.97 E-value=11 Score=29.02 Aligned_cols=33 Identities=27% Similarity=0.348 Sum_probs=24.9
Q ss_pred HHHHHHhCCCceEEEEeChhHHHHHHHHHhCCc
Q 045774 85 LSFLDALEIDRCAFVGHSVSAMIGLLAAIHRPN 117 (275)
Q Consensus 85 ~~~l~~l~~~~~~lvGhS~GG~val~~a~~~p~ 117 (275)
.+.+++.++..-.++|-|.|+.+|..++..++.
T Consensus 19 l~~L~e~g~~~d~i~GtSaGAi~aa~~a~g~~~ 51 (175)
T cd07228 19 LRALEEEGIEIDIIAGSSIGALVGALYAAGHLD 51 (175)
T ss_pred HHHHHHCCCCeeEEEEeCHHHHHHHHHHcCCCH
Confidence 334455677777899999999999988876543
No 265
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=63.29 E-value=1.2e+02 Score=27.71 Aligned_cols=59 Identities=19% Similarity=0.182 Sum_probs=39.2
Q ss_pred EEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhCCC--ceEEEEeChhHHHHHHHHHhC
Q 045774 53 VISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALEID--RCAFVGHSVSAMIGLLAAIHR 115 (275)
Q Consensus 53 via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~~--~~~lvGhS~GG~val~~a~~~ 115 (275)
.+.=|.|=-|.+=-. ..+.|. ....+-+.+.|+.||.+ ..+|=|-|||..-|++++++-
T Consensus 318 LL~~DpRleGGaFYl--Gs~eyE--~~I~~~I~~~L~~LgF~~~qLILSGlSMGTfgAlYYga~l 378 (511)
T TIGR03712 318 LLIGDPRLEGGAFYL--GSDEYE--QGIINVIQEKLDYLGFDHDQLILSGLSMGTFGALYYGAKL 378 (511)
T ss_pred EEeeccccccceeee--CcHHHH--HHHHHHHHHHHHHhCCCHHHeeeccccccchhhhhhcccC
Confidence 444566766655110 111121 34556677788999986 489999999999999988764
No 266
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=62.27 E-value=6.6 Score=34.66 Aligned_cols=40 Identities=18% Similarity=0.239 Sum_probs=31.2
Q ss_pred HHHHHHHhCCCceEEEEeChhHHHHHHHHHhCCcccccee
Q 045774 84 LLSFLDALEIDRCAFVGHSVSAMIGLLAAIHRPNLFSRLI 123 (275)
Q Consensus 84 l~~~l~~l~~~~~~lvGhS~GG~val~~a~~~p~~v~~lv 123 (275)
+.+.|.+.|+.+-++.|-|.|+.+|..+|...++.+..++
T Consensus 101 v~kaL~e~gl~p~~i~GtS~Gaivaa~~a~~~~~e~~~~l 140 (391)
T cd07229 101 VVKALWLRGLLPRIITGTATGALIAALVGVHTDEELLRFL 140 (391)
T ss_pred HHHHHHHcCCCCceEEEecHHHHHHHHHHcCCHHHHHHHH
Confidence 4455556688888999999999999999887666666554
No 267
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=62.08 E-value=6.2 Score=35.15 Aligned_cols=40 Identities=13% Similarity=0.182 Sum_probs=30.5
Q ss_pred HHHHHHHhCCCceEEEEeChhHHHHHHHHHhCCcccccee
Q 045774 84 LLSFLDALEIDRCAFVGHSVSAMIGLLAAIHRPNLFSRLI 123 (275)
Q Consensus 84 l~~~l~~l~~~~~~lvGhS~GG~val~~a~~~p~~v~~lv 123 (275)
+...+.+.++.+-+++|-|.|+.+|..++...++.+..++
T Consensus 85 VlkaL~e~gllp~iI~GtSAGAivaalla~~t~~el~~~~ 124 (407)
T cd07232 85 VVKALLDADLLPNVISGTSGGSLVAALLCTRTDEELKQLL 124 (407)
T ss_pred HHHHHHhCCCCCCEEEEECHHHHHHHHHHcCCHHHHHHHH
Confidence 4444444577788899999999999999987777776654
No 268
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=61.39 E-value=14 Score=29.69 Aligned_cols=33 Identities=30% Similarity=0.341 Sum_probs=26.2
Q ss_pred HHHHHHHhCCCceEEEEeChhHHHHHHHHHhCC
Q 045774 84 LLSFLDALEIDRCAFVGHSVSAMIGLLAAIHRP 116 (275)
Q Consensus 84 l~~~l~~l~~~~~~lvGhS~GG~val~~a~~~p 116 (275)
+.+.+.+.++..-.++|-|.|+.+|..+|...+
T Consensus 16 vl~aL~e~g~~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 16 VLKALAEAGIEPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCc
Confidence 444555667777799999999999999988665
No 269
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=59.22 E-value=7.7 Score=33.17 Aligned_cols=38 Identities=13% Similarity=0.164 Sum_probs=27.6
Q ss_pred HHHHHHHhCCCceEEEEeChhHHHHHHHHHhCCccccc
Q 045774 84 LLSFLDALEIDRCAFVGHSVSAMIGLLAAIHRPNLFSR 121 (275)
Q Consensus 84 l~~~l~~l~~~~~~lvGhS~GG~val~~a~~~p~~v~~ 121 (275)
+.+.+.+.++.+-++.|-|.|+.+|..++...++.+..
T Consensus 86 VlkaL~e~gl~p~~i~GsSaGAivaa~~~~~t~~El~~ 123 (323)
T cd07231 86 VVRTLVEHQLLPRVIAGSSVGSIVCAIIATRTDEELQS 123 (323)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCHHHHHH
Confidence 44444555888888999999999999888755444433
No 270
>COG1576 Uncharacterized conserved protein [Function unknown]
Probab=58.43 E-value=33 Score=25.96 Aligned_cols=57 Identities=14% Similarity=0.153 Sum_probs=37.3
Q ss_pred hHHHhhcCCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhCCCceEEEEeChhHHHHHHHH
Q 045774 43 VIPSFTRAYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALEIDRCAFVGHSVSAMIGLLAA 112 (275)
Q Consensus 43 ~~~~l~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~GG~val~~a 112 (275)
+.+.+.++-.|++.|.+|--.| -+.+|+.+..+-+ .|-+=+++||-|.|=.-++...
T Consensus 60 il~~i~~~~~vi~Ld~~Gk~~s------------Se~fA~~l~~~~~-~G~~i~f~IGG~~Gl~~~~~~~ 116 (155)
T COG1576 60 ILAAIPKGSYVVLLDIRGKALS------------SEEFADFLERLRD-DGRDISFLIGGADGLSEAVKAR 116 (155)
T ss_pred HHHhcCCCCeEEEEecCCCcCC------------hHHHHHHHHHHHh-cCCeEEEEEeCcccCCHHHHHH
Confidence 3445666779999999876433 3566666555543 3423378889999977666543
No 271
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=58.40 E-value=20 Score=33.23 Aligned_cols=97 Identities=14% Similarity=0.163 Sum_probs=56.4
Q ss_pred eEEEEcCCCCChhhhhhhHHH--------hhcCC-EEEEEccCC----C-CCCCCCCCCcccccchhHHHHHHHHHHHHh
Q 045774 26 IIVFSHGFGSDQSVWSRVIPS--------FTRAY-RVISFDLMC----S-GSCDPTNYDFQRYATLDGYVDDLLSFLDAL 91 (275)
Q Consensus 26 ~ivllHG~~~~~~~w~~~~~~--------l~~~~-~via~Dl~G----~-G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l 91 (275)
++=|.=|++-.......+.+. |.++. .|+--.--| + |+|.+... +. -+..+.+...+.+++..
T Consensus 260 pLTLSiGvg~g~~~~~elg~vA~~~L~lAlgRGGDQVvIke~~~k~~fyGG~s~~~ek-rT-RvRaRvis~al~d~i~e- 336 (655)
T COG3887 260 PLTLSIGVGYGENNLIELGEVAQSNLDLALGRGGDQVVIKENNGKVRFYGGKSNPMEK-RT-RVRARVISTALSDIIKE- 336 (655)
T ss_pred ceEEEEEeccCcccHHHHHHHHHHhHHHHhccCCceEEEEcCCCceeeeCCCcchhHH-hH-HHHHHHHHHHHHHHHhh-
Confidence 577777877666555554431 22232 333332222 3 34543210 11 13456677777777765
Q ss_pred CCCceEEEEe------ChhHHHHHHHHHhCCccccceeeecC
Q 045774 92 EIDRCAFVGH------SVSAMIGLLAAIHRPNLFSRLILIGG 127 (275)
Q Consensus 92 ~~~~~~lvGh------S~GG~val~~a~~~p~~v~~lvli~~ 127 (275)
.++|+++|| +.|+++++..-+..-++ .+.+++++
T Consensus 337 -~d~VfImGHk~pDmDalGsAig~~~~A~~~~~-~a~~v~dp 376 (655)
T COG3887 337 -SDNVFIMGHKFPDMDALGSAIGMQKFASMNNK-EAFAVLDP 376 (655)
T ss_pred -cCcEEEEccCCCChHHHHHHHHHHHHHHhccc-ccEEEECc
Confidence 789999999 89999998755544444 55666663
No 272
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=55.39 E-value=22 Score=27.23 Aligned_cols=32 Identities=28% Similarity=0.282 Sum_probs=24.0
Q ss_pred HHHHHHHhCCCceEEEEeChhHHHHHHHHHhC
Q 045774 84 LLSFLDALEIDRCAFVGHSVSAMIGLLAAIHR 115 (275)
Q Consensus 84 l~~~l~~l~~~~~~lvGhS~GG~val~~a~~~ 115 (275)
+.+.|++.++..-.++|-|.|+.+|..++...
T Consensus 18 vl~~L~~~~~~~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 18 VLKALEEAGIPIDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred HHHHHHHcCCCeeEEEEECHHHHHHHHHHcCC
Confidence 44444555677778999999999998888644
No 273
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=53.95 E-value=23 Score=29.38 Aligned_cols=36 Identities=14% Similarity=-0.034 Sum_probs=26.3
Q ss_pred HHHHHHHhCCC-ceEEEEeChhHHHHHHHHHhCCccc
Q 045774 84 LLSFLDALEID-RCAFVGHSVSAMIGLLAAIHRPNLF 119 (275)
Q Consensus 84 l~~~l~~l~~~-~~~lvGhS~GG~val~~a~~~p~~v 119 (275)
+.+.+.+.++. --.++|-|.|+.++..++...+++.
T Consensus 16 vl~al~e~~~~~fd~i~GtSaGAi~a~~~~~g~~~~~ 52 (266)
T cd07208 16 VLDAFLEAGIRPFDLVIGVSAGALNAASYLSGQRGRA 52 (266)
T ss_pred HHHHHHHcCCCCCCEEEEECHHHHhHHHHHhCCcchH
Confidence 44444455666 5588999999999999888766543
No 274
>COG3933 Transcriptional antiterminator [Transcription]
Probab=52.57 E-value=1.2e+02 Score=27.26 Aligned_cols=71 Identities=13% Similarity=0.249 Sum_probs=56.2
Q ss_pred eEEEEcCCCCChhhhhhhHHHhhcCCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhCCCceEEEEeChhH
Q 045774 26 IIVFSHGFGSDQSVWSRVIPSFTRAYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALEIDRCAFVGHSVSA 105 (275)
Q Consensus 26 ~ivllHG~~~~~~~w~~~~~~l~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~GG 105 (275)
.||.-||..+ +.+...++..|-+.--++++|+|-- .+..+..+.+.+.+++.+..+=.++=-+||+
T Consensus 111 vIiiAHG~sT-ASSmaevanrLL~~~~~~aiDMPLd-------------vsp~~vle~l~e~~k~~~~~~GlllLVDMGS 176 (470)
T COG3933 111 VIIIAHGYST-ASSMAEVANRLLGEEIFIAIDMPLD-------------VSPSDVLEKLKEYLKERDYRSGLLLLVDMGS 176 (470)
T ss_pred EEEEecCcch-HHHHHHHHHHHhhccceeeecCCCc-------------CCHHHHHHHHHHHHHhcCccCceEEEEecch
Confidence 7999999854 5557778887777788999998832 2578899999999999887776677779999
Q ss_pred HHHHH
Q 045774 106 MIGLL 110 (275)
Q Consensus 106 ~val~ 110 (275)
..+..
T Consensus 177 L~~f~ 181 (470)
T COG3933 177 LTSFG 181 (470)
T ss_pred HHHHH
Confidence 88764
No 275
>TIGR02883 spore_cwlD N-acetylmuramoyl-L-alanine amidase CwlD. Members of this protein family are the CwlD family of N-acetylmuramoyl-L-alanine amidase. This family has been called the germination-specific N-acetylmuramoyl-L-alanine amidase. CwlD is required, along with the putative deactylase PdaA, to make muramic delta-lactam, a novel peptidoglycan constituent found only in spores. CwlD mutants show a germination defect.
Probab=51.85 E-value=24 Score=27.69 Aligned_cols=40 Identities=15% Similarity=0.155 Sum_probs=23.1
Q ss_pred EEEEEccCCCCCCCCCCCC----cccccchhHHHHHHHHHHHHhCC
Q 045774 52 RVISFDLMCSGSCDPTNYD----FQRYATLDGYVDDLLSFLDALEI 93 (275)
Q Consensus 52 ~via~Dl~G~G~S~~~~~~----~~~~~~~~~~a~dl~~~l~~l~~ 93 (275)
++|++| ||||.+++.... .+.-. --+++..+.+.|++.|.
T Consensus 1 k~I~iD-pGHGg~d~GA~~~~g~~E~~~-~l~ia~~l~~~L~~~G~ 44 (189)
T TIGR02883 1 KIIVID-PGHGGIDGGAVGKDGTLEKDI-TLEIALKLKDYLQEQGA 44 (189)
T ss_pred CEEEEe-CCCCCCCCCCCCCCCccHHHH-HHHHHHHHHHHHHhCCC
Confidence 468888 999988763111 11111 22556666677776654
No 276
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=47.49 E-value=18 Score=32.91 Aligned_cols=60 Identities=15% Similarity=0.187 Sum_probs=39.1
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHHHHcC------CCccEEEcCCCCCCCCCCChHHHHHHHHHHHHh
Q 045774 213 RVPVCIIQSSVDLSVPPAVAEYMRRHLG------GPTVLEFLPTHGHLPHVSSPAPVANAIQQLLRR 273 (275)
Q Consensus 213 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~------~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 273 (275)
+.+.+..+|-.|..+|.-.++.--+.++ +...+.++ ++|||++.++|+...+.+..++..
T Consensus 425 ~Lkw~~~~g~~d~~~~~~~~~~t~e~~~~~~s~~n~~~~r~y-~aGHMvp~d~P~~~~~~~~~~~~~ 490 (498)
T COG2939 425 KLKWLGASGYFDASTPFFWSRLTLEEMGGYKSYRNLTFLRIY-EAGHMVPYDRPESSLEMVNLWING 490 (498)
T ss_pred cceEeeecchhhhcCCCcccccchhhcccccccCCceEEEEe-cCcceeecCChHHHHHHHHHHHhh
Confidence 5667777777777776544322222222 22233444 599999999999999988887753
No 277
>PRK10319 N-acetylmuramoyl-l-alanine amidase I; Provisional
Probab=46.96 E-value=34 Score=28.93 Aligned_cols=43 Identities=19% Similarity=0.178 Sum_probs=24.9
Q ss_pred CCEEEEEccCCCCCCCCCCCCc---ccccchhHHHHHHHHHHHHhCC
Q 045774 50 AYRVISFDLMCSGSCDPTNYDF---QRYATLDGYVDDLLSFLDALEI 93 (275)
Q Consensus 50 ~~~via~Dl~G~G~S~~~~~~~---~~~~~~~~~a~dl~~~l~~l~~ 93 (275)
.-++|++| ||||..++..... ....---+++..+.+.|++.|.
T Consensus 55 ~~~~IvID-pGHGG~DpGAvg~~G~~EKdi~L~IA~~l~~~L~~~G~ 100 (287)
T PRK10319 55 GKRVVMLD-PGHGGIDTGAIGRNGSKEKHVVLAIAKNVRSILRNHGI 100 (287)
T ss_pred CCeEEEEE-CCCCCCCCCCcCCCCCcHHHHHHHHHHHHHHHHHHCCC
Confidence 35799999 9999987632110 0011123456666777776543
No 278
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=46.59 E-value=36 Score=29.12 Aligned_cols=19 Identities=16% Similarity=0.216 Sum_probs=16.0
Q ss_pred EEEEeChhHHHHHHHHHhC
Q 045774 97 AFVGHSVSAMIGLLAAIHR 115 (275)
Q Consensus 97 ~lvGhS~GG~val~~a~~~ 115 (275)
.+.|-|+||.+|+.++..+
T Consensus 35 ~i~GTStGgiIA~~la~g~ 53 (312)
T cd07212 35 WIAGTSTGGILALALLHGK 53 (312)
T ss_pred EEEeeChHHHHHHHHHcCC
Confidence 5679999999999988644
No 279
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=46.44 E-value=23 Score=30.32 Aligned_cols=22 Identities=27% Similarity=0.232 Sum_probs=18.7
Q ss_pred CCCceEEEEeChhHHHHHHHHH
Q 045774 92 EIDRCAFVGHSVSAMIGLLAAI 113 (275)
Q Consensus 92 ~~~~~~lvGhS~GG~val~~a~ 113 (275)
+.++..+.|||+|=+.|+.++.
T Consensus 83 ~~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 83 GVKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred CCCCceeecccHhHHHHHHHcc
Confidence 4778899999999999987764
No 280
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=46.23 E-value=22 Score=29.20 Aligned_cols=38 Identities=16% Similarity=0.166 Sum_probs=25.7
Q ss_pred HHHHHHHhCCC---c-eEEEEeChhHHHHHHHHHhCCccccce
Q 045774 84 LLSFLDALEID---R-CAFVGHSVSAMIGLLAAIHRPNLFSRL 122 (275)
Q Consensus 84 l~~~l~~l~~~---~-~~lvGhS~GG~val~~a~~~p~~v~~l 122 (275)
+.+.+.+.+++ + -.++|-|.|+.+|..++ ..|+++..+
T Consensus 17 Vl~~L~e~g~~l~~~~~~i~GtSaGAl~aa~~a-~~~~~~~~~ 58 (246)
T cd07222 17 AAKALLRHGKKLLKRVKRFAGASAGSLVAAVLL-TAPEKIEEC 58 (246)
T ss_pred HHHHHHHcCchhhccCCEEEEECHHHHHHHHHh-cChHHHHHH
Confidence 34444445553 3 37999999999999988 456665544
No 281
>PRK09004 FMN-binding protein MioC; Provisional
Probab=46.07 E-value=57 Score=24.36 Aligned_cols=18 Identities=33% Similarity=0.383 Sum_probs=10.4
Q ss_pred chhHHHHHHHHHHHHhCC
Q 045774 76 TLDGYVDDLLSFLDALEI 93 (275)
Q Consensus 76 ~~~~~a~dl~~~l~~l~~ 93 (275)
++...++.+.+.+..+|-
T Consensus 97 ~fc~~~~~ld~~l~~lGa 114 (146)
T PRK09004 97 TFCGAIDKLEQLLKAKGA 114 (146)
T ss_pred HHhHHHHHHHHHHHHcCC
Confidence 355566666666665554
No 282
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=44.78 E-value=31 Score=29.29 Aligned_cols=35 Identities=17% Similarity=0.187 Sum_probs=25.0
Q ss_pred HHHHHHHhCCCceEEEEeChhHHHHHHHHHhCCcc
Q 045774 84 LLSFLDALEIDRCAFVGHSVSAMIGLLAAIHRPNL 118 (275)
Q Consensus 84 l~~~l~~l~~~~~~lvGhS~GG~val~~a~~~p~~ 118 (275)
+.+.+...++.+-++.|-|.|+.+|..++....+.
T Consensus 87 vl~aL~e~~l~~~~i~GtSaGAi~aa~~~~~~~~E 121 (298)
T cd07206 87 VVKALWEQDLLPRVISGSSAGAIVAALLGTHTDEE 121 (298)
T ss_pred HHHHHHHcCCCCCEEEEEcHHHHHHHHHHcCCcHH
Confidence 33333445677778999999999999888654433
No 283
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=44.68 E-value=8.4 Score=33.30 Aligned_cols=37 Identities=24% Similarity=0.383 Sum_probs=25.4
Q ss_pred HHHhCCCceEEEEeChhHHH-HHHHHHhCCccccceeeecCC
Q 045774 88 LDALEIDRCAFVGHSVSAMI-GLLAAIHRPNLFSRLILIGGS 128 (275)
Q Consensus 88 l~~l~~~~~~lvGhS~GG~v-al~~a~~~p~~v~~lvli~~~ 128 (275)
+++-..+.++|+|.|.|+|+ ++++-.+.|.. |.||+.
T Consensus 121 Vea~~~~hfTllgQaigsmIl~~Eai~r~~Pd----i~IDtM 158 (465)
T KOG1387|consen 121 VEASTWKHFTLLGQAIGSMILAFEAIIRFPPD----IFIDTM 158 (465)
T ss_pred eecccccceehHHHHHHHHHHHHHHHHhCCch----heEecC
Confidence 33444567899999999999 56766666643 456643
No 284
>PF02590 SPOUT_MTase: Predicted SPOUT methyltransferase; InterPro: IPR003742 This family of proteins are predicted to be SPOUT methyltransferases []. ; GO: 0008168 methyltransferase activity, 0006364 rRNA processing, 0005737 cytoplasm; PDB: 1VH0_E 4FAK_A 1TO0_G 1O6D_A 1NS5_B.
Probab=44.54 E-value=35 Score=25.91 Aligned_cols=54 Identities=13% Similarity=0.140 Sum_probs=32.3
Q ss_pred hhHHHhhcCCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhCCCceEEEEeChhHHH
Q 045774 42 RVIPSFTRAYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALEIDRCAFVGHSVSAMI 107 (275)
Q Consensus 42 ~~~~~l~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~GG~v 107 (275)
.+...+.++-.+|++|-.|-=. |-+++|+.+..+...-.-+=+.+||-|.|=.-
T Consensus 59 ~il~~i~~~~~~i~Ld~~Gk~~------------sS~~fA~~l~~~~~~g~~~i~F~IGG~~G~~~ 112 (155)
T PF02590_consen 59 RILKKIPPNDYVILLDERGKQL------------SSEEFAKKLERWMNQGKSDIVFIIGGADGLSE 112 (155)
T ss_dssp HHHCTSHTTSEEEEE-TTSEE--------------HHHHHHHHHHHHHTTS-EEEEEE-BTTB--H
T ss_pred HHHhhccCCCEEEEEcCCCccC------------ChHHHHHHHHHHHhcCCceEEEEEecCCCCCH
Confidence 3444455678899999776632 34678887777766522234789999998433
No 285
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=42.46 E-value=44 Score=27.19 Aligned_cols=35 Identities=17% Similarity=0.157 Sum_probs=25.4
Q ss_pred HHHHHHHHhCCC--ceEEEEeChhHHHHHHHHHhCCc
Q 045774 83 DLLSFLDALEID--RCAFVGHSVSAMIGLLAAIHRPN 117 (275)
Q Consensus 83 dl~~~l~~l~~~--~~~lvGhS~GG~val~~a~~~p~ 117 (275)
=+.+.+.+.++. .-.++|-|.|+.++..++...+.
T Consensus 16 GVl~~L~e~gi~~~~~~i~G~SAGAl~aa~~asg~~~ 52 (233)
T cd07224 16 GVLSLLIEAGVINETTPLAGASAGSLAAACSASGLSP 52 (233)
T ss_pred HHHHHHHHcCCCCCCCEEEEEcHHHHHHHHHHcCCCH
Confidence 344555556665 34899999999999988876554
No 286
>PF13709 DUF4159: Domain of unknown function (DUF4159)
Probab=42.34 E-value=97 Score=24.74 Aligned_cols=56 Identities=11% Similarity=0.093 Sum_probs=38.1
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHHHHcCCCccEEEcCCCCCCCCCCChHHHHHHHHHH
Q 045774 213 RVPVCIIQSSVDLSVPPAVAEYMRRHLGGPTVLEFLPTHGHLPHVSSPAPVANAIQQL 270 (275)
Q Consensus 213 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~f 270 (275)
..|.+++.|..+...+++..+.+.+.+.+. -+.+++++ ++.--..-+.+.+.+++.
T Consensus 53 ~yP~ly~~g~~~~~~s~~e~~~Lr~Yl~~G-Gfl~~D~~-~~~~~~~~~~~r~~~~~v 108 (207)
T PF13709_consen 53 FYPFLYWPGHGDFPLSDEEIANLRRYLENG-GFLLFDDR-DCGSAGFDASFRRLMKRV 108 (207)
T ss_pred hCCEEEEeCCCCCCCCHHHHHHHHHHHHcC-CEEEEECC-CcccccccHHHHHHHHHh
Confidence 699999999999988888888899988653 46667665 322222234444444443
No 287
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=42.12 E-value=66 Score=27.16 Aligned_cols=47 Identities=15% Similarity=0.089 Sum_probs=35.0
Q ss_pred hHHHHHHHHHHHHhCCCc---eEEEEeChhHHHHHHHHHhCCccccceeee
Q 045774 78 DGYVDDLLSFLDALEIDR---CAFVGHSVSAMIGLLAAIHRPNLFSRLILI 125 (275)
Q Consensus 78 ~~~a~dl~~~l~~l~~~~---~~lvGhS~GG~val~~a~~~p~~v~~lvli 125 (275)
+.+..-+..+++++++++ +.=||=.|||+. +.+|.+|-.+|-++.+-
T Consensus 55 eAQ~~k~~~~~~kl~L~~G~~lLDiGCGWG~l~-~~aA~~y~v~V~GvTlS 104 (283)
T COG2230 55 EAQRAKLDLILEKLGLKPGMTLLDIGCGWGGLA-IYAAEEYGVTVVGVTLS 104 (283)
T ss_pred HHHHHHHHHHHHhcCCCCCCEEEEeCCChhHHH-HHHHHHcCCEEEEeeCC
Confidence 445566777888888764 666799999987 66677777777777653
No 288
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=42.03 E-value=43 Score=30.57 Aligned_cols=65 Identities=17% Similarity=0.183 Sum_probs=44.3
Q ss_pred hCCCCCcEEEEEeCCCCCCCHHHHHHHH----HHcCC-------CccEEEcCCCCCCCCCC--ChHHHHHHHHHHHHh
Q 045774 209 LGLVRVPVCIIQSSVDLSVPPAVAEYMR----RHLGG-------PTVLEFLPTHGHLPHVS--SPAPVANAIQQLLRR 273 (275)
Q Consensus 209 l~~i~~P~l~i~G~~D~~~~~~~~~~~~----~~~~~-------~~~~~~i~~~gH~~~~e--~p~~~~~~i~~fl~~ 273 (275)
+++---.+++.||..|.++|+.....+. +..++ -.++..+|+.+|+.--. .+-.....|.+|+++
T Consensus 349 F~~~GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~ 426 (474)
T PF07519_consen 349 FRARGGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVEN 426 (474)
T ss_pred HHhcCCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhC
Confidence 3344678999999999999876554332 23332 13678899999996544 344566778888874
No 289
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=41.61 E-value=28 Score=28.75 Aligned_cols=22 Identities=36% Similarity=0.661 Sum_probs=15.5
Q ss_pred HHHHHh-CCCceEEEEeChhHHH
Q 045774 86 SFLDAL-EIDRCAFVGHSVSAMI 107 (275)
Q Consensus 86 ~~l~~l-~~~~~~lvGhS~GG~v 107 (275)
.+++.+ +.+.+++.|||+|..=
T Consensus 226 ~~~~~l~~i~~I~i~GhSl~~~D 248 (270)
T PF14253_consen 226 SFFESLSDIDEIIIYGHSLGEVD 248 (270)
T ss_pred HHHhhhcCCCEEEEEeCCCchhh
Confidence 344444 3578999999999753
No 290
>PRK05723 flavodoxin; Provisional
Probab=41.29 E-value=40 Score=25.38 Aligned_cols=57 Identities=14% Similarity=0.266 Sum_probs=32.9
Q ss_pred CCCCChhhhhhhHHHhhcC----CEEEEEccCCCCCCCCCCCCcccc-cchhHHHHHHHHHHHHhCCCce
Q 045774 32 GFGSDQSVWSRVIPSFTRA----YRVISFDLMCSGSCDPTNYDFQRY-ATLDGYVDDLLSFLDALEIDRC 96 (275)
Q Consensus 32 G~~~~~~~w~~~~~~l~~~----~~via~Dl~G~G~S~~~~~~~~~~-~~~~~~a~dl~~~l~~l~~~~~ 96 (275)
|-|..+..|..+.+.|.+. ..=+.+=.-|.|.|. | .++...++.+.+.+.++|-+++
T Consensus 59 G~Ge~Pd~~~~f~~~L~~~~~~~l~~~~~aVfGLGDs~--------Y~~~Fc~a~~~ld~~L~~lGA~rv 120 (151)
T PRK05723 59 GMGELPDNLMPLYSAIRDQLPAAWRGLPGAVIALGDSS--------YGDTFCGGGEQMRELFAELGVREV 120 (151)
T ss_pred CCCCCchhHHHHHHHHHhcCccCCCCCEEEEEeEeCCc--------chHHHhHHHHHHHHHHHHCCCcEe
Confidence 4455667777777666542 111122224556542 2 2477788888888888775443
No 291
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=40.93 E-value=14 Score=28.49 Aligned_cols=59 Identities=22% Similarity=0.294 Sum_probs=35.0
Q ss_pred CCCCcEEEEEeCCCCCC-CHHHHHHHHHHcCCCccEEEcCCCCCCCC-CCChHHHHHHHHHH
Q 045774 211 LVRVPVCIIQSSVDLSV-PPAVAEYMRRHLGGPTVLEFLPTHGHLPH-VSSPAPVANAIQQL 270 (275)
Q Consensus 211 ~i~~P~l~i~G~~D~~~-~~~~~~~~~~~~~~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~f 270 (275)
.+.+|+.++.+++|... +........+...+...++.++ ++|+.+ .+++..+.+.|..+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~-g~H~~~~~~~~~~~~~~~~~~ 211 (212)
T smart00824 151 PVAAPTLLVRASEPLAEWPDEDPDGWRAHWPLPHTVVDVP-GDHFTMMEEHAAATARAVHDW 211 (212)
T ss_pred CCCCCEEEEeccCCCCCCCCCCcccccCCCCCCceeEEcc-CchHHHHHHhHHHHHHHHHhh
Confidence 57899999999988653 2121122222333334666776 688876 45556666666554
No 292
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=40.88 E-value=31 Score=27.92 Aligned_cols=27 Identities=19% Similarity=0.327 Sum_probs=21.6
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHHHHc
Q 045774 213 RVPVCIIQSSVDLSVPPAVAEYMRRHL 239 (275)
Q Consensus 213 ~~P~l~i~G~~D~~~~~~~~~~~~~~~ 239 (275)
..|+++++|+.|..+.+...+.+.+.+
T Consensus 169 ~~P~~v~hG~~D~tV~~~n~~~~~~q~ 195 (220)
T PF10503_consen 169 GYPRIVFHGTADTTVNPQNADQLVAQW 195 (220)
T ss_pred CCCEEEEecCCCCccCcchHHHHHHHH
Confidence 469999999999999887766665544
No 293
>PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2.4.1.13 from EC in the following reaction: UDP-glucose + D-fructose = UDP + sucrose This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family IPR001296 from INTERPRO. This enzyme is found mainly in plants but also appears in bacteria.; GO: 0005985 sucrose metabolic process; PDB: 2R60_A 2R66_A 2R68_A 3S27_G 3S29_A 3S28_A.
Probab=40.06 E-value=62 Score=29.70 Aligned_cols=41 Identities=20% Similarity=0.307 Sum_probs=30.2
Q ss_pred ccchhHHHHHHHH-HHHHhCCCceEEEEe-ChhHHHHHHHHHh
Q 045774 74 YATLDGYVDDLLS-FLDALEIDRCAFVGH-SVSAMIGLLAAIH 114 (275)
Q Consensus 74 ~~~~~~~a~dl~~-~l~~l~~~~~~lvGh-S~GG~val~~a~~ 114 (275)
+.-++.+|+|+.. +++.++..+-.++|| |-||.+|..++.+
T Consensus 380 WPyLe~fa~d~~~~i~~e~~~~PdlI~GnYsDgnlvA~LLs~~ 422 (550)
T PF00862_consen 380 WPYLEEFADDAEREILAELQGKPDLIIGNYSDGNLVASLLSRK 422 (550)
T ss_dssp GGGHHHHHHHHHHHHHHHHTS--SEEEEEHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHhCCCCcEEEeccCcchHHHHHHHhh
Confidence 3358999999865 456777777788887 8899999888754
No 294
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=39.98 E-value=3.6 Score=34.02 Aligned_cols=92 Identities=18% Similarity=0.166 Sum_probs=50.7
Q ss_pred CceEEEEcCCCCChhhhhhhHHHh-hcCCEEEEEcc----------CCCCCCCCCCCCcc--cc--cchhHHHHHHHHHH
Q 045774 24 QSIIVFSHGFGSDQSVWSRVIPSF-TRAYRVISFDL----------MCSGSCDPTNYDFQ--RY--ATLDGYVDDLLSFL 88 (275)
Q Consensus 24 ~~~ivllHG~~~~~~~w~~~~~~l-~~~~~via~Dl----------~G~G~S~~~~~~~~--~~--~~~~~~a~dl~~~l 88 (275)
-|.+++.||++...+.-......+ ...++++..|. +|++.+.....+.. .+ ........+.....
T Consensus 49 ~p~v~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (299)
T COG1073 49 LPAVVFLHGFGSSKEQSLGYAVLLAEKGYRVLAGDASLFGESGGDPRGLADSEGYAEDFSAAVLLLLSEGVLDKDYRLLG 128 (299)
T ss_pred CceEEeccCccccccCcchHHHHhhhceeEEeeeccccccccccccccccCccccccccchhheeeeccccccHHHHHHh
Confidence 467999999988876654444444 45777766664 34433321000000 00 01111111211111
Q ss_pred HHhCCCceEEEEeChhHHHHHHHHHhCCc
Q 045774 89 DALEIDRCAFVGHSVSAMIGLLAAIHRPN 117 (275)
Q Consensus 89 ~~l~~~~~~lvGhS~GG~val~~a~~~p~ 117 (275)
. ..++....|+++|+..+..++...+.
T Consensus 129 ~--~~~~~~~~g~~~~~~~~~~~~~~~~~ 155 (299)
T COG1073 129 A--SLGPRILAGLSLGGPSAGALLAWGPT 155 (299)
T ss_pred h--hcCcceEEEEEeeccchHHHhhcchh
Confidence 1 12688999999999999988887774
No 295
>PRK08105 flavodoxin; Provisional
Probab=39.19 E-value=48 Score=24.86 Aligned_cols=56 Identities=13% Similarity=0.237 Sum_probs=29.3
Q ss_pred CCCCChhhhhhhHHHhhcC---CEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhCCCc
Q 045774 32 GFGSDQSVWSRVIPSFTRA---YRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALEIDR 95 (275)
Q Consensus 32 G~~~~~~~w~~~~~~l~~~---~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~~~ 95 (275)
|-|..+..|..+.+.|.+. ..=+-+=.-|.|.|. |.++...++.+.+.+..+|-++
T Consensus 60 G~Ge~p~~~~~f~~~l~~~~~~l~~~~~avfGlGds~--------Y~~fc~~~~~ld~~l~~lGa~~ 118 (149)
T PRK08105 60 GQGDLPDSIVPLFQALKDTAGYQPNLRYGVIALGDSS--------YDNFCGAGKQFDALLQEQGAKR 118 (149)
T ss_pred CCCCCChhHHHHHHHHHhcCcccCCCEEEEEeeecCC--------HHHHHHHHHHHHHHHHHCCCeE
Confidence 3445566666666555432 110111223556542 2346777777777777766443
No 296
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=39.15 E-value=32 Score=29.81 Aligned_cols=28 Identities=21% Similarity=0.086 Sum_probs=19.7
Q ss_pred HHHHHhCCCc------eEEEEeChhHHHHHHHHH
Q 045774 86 SFLDALEIDR------CAFVGHSVSAMIGLLAAI 113 (275)
Q Consensus 86 ~~l~~l~~~~------~~lvGhS~GG~val~~a~ 113 (275)
+++...++.. ..++|||+|=+.|+.++.
T Consensus 110 ~~l~~~g~~~~~~~~~~~~~GHSlGE~aA~~~AG 143 (343)
T PLN02752 110 EKLRARDGGQAVIDSVDVCAGLSLGEYTALVFAG 143 (343)
T ss_pred HHHHhcCCCcccccCCCeeeeccHHHHHHHHHhC
Confidence 4455566432 357999999999887763
No 297
>PRK10431 N-acetylmuramoyl-l-alanine amidase II; Provisional
Probab=37.99 E-value=67 Score=29.05 Aligned_cols=45 Identities=16% Similarity=0.197 Sum_probs=25.9
Q ss_pred EEEEEccCCCCCCCCCCCC----cccccchhHHHHHHHHHHHHhCCCceEE
Q 045774 52 RVISFDLMCSGSCDPTNYD----FQRYATLDGYVDDLLSFLDALEIDRCAF 98 (275)
Q Consensus 52 ~via~Dl~G~G~S~~~~~~----~~~~~~~~~~a~dl~~~l~~l~~~~~~l 98 (275)
-+|++| ||||..++.... .++-. --+++..|.+.|++.+.-++++
T Consensus 192 ~vIvID-pGHGG~DpGA~g~~G~~EKdv-~L~iA~~L~~~L~~~~g~~Vvl 240 (445)
T PRK10431 192 VIIAID-AGHGGQDPGAIGPGGTREKNV-TIAIARKLRTLLNDDPMFKGVL 240 (445)
T ss_pred eEEEEe-CCCCCCCCCCcCCCCccHHHH-HHHHHHHHHHHHHhCCCCEEEE
Confidence 489999 999998863211 11111 2346667777777653333433
No 298
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=37.79 E-value=33 Score=38.26 Aligned_cols=29 Identities=21% Similarity=0.224 Sum_probs=24.2
Q ss_pred HHHHHHHhCCCceEEEEeChhHHHHHHHH
Q 045774 84 LLSFLDALEIDRCAFVGHSVSAMIGLLAA 112 (275)
Q Consensus 84 l~~~l~~l~~~~~~lvGhS~GG~val~~a 112 (275)
+.+++..+|+++-.++|||+|=+.|+.+|
T Consensus 664 l~~lL~~~Gi~Pd~v~GHSlGE~aAa~aA 692 (2582)
T TIGR02813 664 QYKLFTQAGFKADMTAGHSFGELSALCAA 692 (2582)
T ss_pred HHHHHHHcCCccceeecCCHHHHHHHHHh
Confidence 45667788999999999999998887655
No 299
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=37.02 E-value=1e+02 Score=24.28 Aligned_cols=65 Identities=20% Similarity=0.224 Sum_probs=44.9
Q ss_pred cCCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhCCCceEEEEeChhHHHHHHHHHhCCc--cccceeee
Q 045774 49 RAYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALEIDRCAFVGHSVSAMIGLLAAIHRPN--LFSRLILI 125 (275)
Q Consensus 49 ~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~GG~val~~a~~~p~--~v~~lvli 125 (275)
+++.+|.+|-+|.... -....+++.++++......++||=-+..+.-.+..+..+-+ .+.++|+-
T Consensus 82 ~~~D~vlIDT~Gr~~~------------d~~~~~el~~~~~~~~~~~~~LVlsa~~~~~~~~~~~~~~~~~~~~~lIlT 148 (196)
T PF00448_consen 82 KGYDLVLIDTAGRSPR------------DEELLEELKKLLEALNPDEVHLVLSATMGQEDLEQALAFYEAFGIDGLILT 148 (196)
T ss_dssp TTSSEEEEEE-SSSST------------HHHHHHHHHHHHHHHSSSEEEEEEEGGGGGHHHHHHHHHHHHSSTCEEEEE
T ss_pred cCCCEEEEecCCcchh------------hHHHHHHHHHHhhhcCCccceEEEecccChHHHHHHHHHhhcccCceEEEE
Confidence 3699999999988521 25567778888888877778888777777777655444323 46777764
No 300
>COG0218 Predicted GTPase [General function prediction only]
Probab=36.43 E-value=51 Score=26.20 Aligned_cols=13 Identities=23% Similarity=0.143 Sum_probs=11.3
Q ss_pred EEEEccCCCCCCC
Q 045774 53 VISFDLMCSGSCD 65 (275)
Q Consensus 53 via~Dl~G~G~S~ 65 (275)
...+|+||||...
T Consensus 72 ~~lVDlPGYGyAk 84 (200)
T COG0218 72 LRLVDLPGYGYAK 84 (200)
T ss_pred EEEEeCCCccccc
Confidence 7889999999764
No 301
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=34.93 E-value=67 Score=26.34 Aligned_cols=35 Identities=14% Similarity=0.095 Sum_probs=23.9
Q ss_pred HHHHHHHhCCC--c--eEEEEeChhHHHHHHHHHhCC-cc
Q 045774 84 LLSFLDALEID--R--CAFVGHSVSAMIGLLAAIHRP-NL 118 (275)
Q Consensus 84 l~~~l~~l~~~--~--~~lvGhS~GG~val~~a~~~p-~~ 118 (275)
+.+.+.+.++. + -.++|-|.|+.++..++...+ +.
T Consensus 17 Vl~~L~e~g~~l~~~~~~i~GtSAGAl~aa~~a~g~~~~~ 56 (243)
T cd07204 17 VASALREHAPRLLQNARRIAGASAGAIVAAVVLCGVSMEE 56 (243)
T ss_pred HHHHHHHcCcccccCCCEEEEEcHHHHHHHHHHhCCCHHH
Confidence 33444444544 2 389999999999998887654 44
No 302
>cd06143 PAN2_exo DEDDh 3'-5' exonuclease domain of the eukaryotic exoribonuclease PAN2. PAN2 is the catalytic subunit of poly(A) nuclease (PAN), a Pab1p-dependent 3'-5' exoribonuclease which plays an important role in the posttranscriptional maturation of pre-mRNAs. PAN catalyzes the deadenylation of poly(A) tails, which are initially synthesized to default lengths of 70 to 90, to mRNA-specific lengths of 55 to 71. Pab1p and PAN also play a role in the export and decay of mRNA. PAN2 contains a DEDDh-type DnaQ-like 3'-5' exonuclease domain with three conserved sequence motifs termed ExoI, ExoII and ExoIII, with a specific Hx(4)D conserved pattern at ExoIII. These motifs are clustered around the active site and contain four conserved acidic residues that serve as ligands for the two metal ions required for catalysis.
Probab=34.81 E-value=41 Score=26.12 Aligned_cols=22 Identities=27% Similarity=0.499 Sum_probs=15.3
Q ss_pred CceEEEEeChhHHH-HHHHHHhCCc
Q 045774 94 DRCAFVGHSVSAMI-GLLAAIHRPN 117 (275)
Q Consensus 94 ~~~~lvGhS~GG~v-al~~a~~~p~ 117 (275)
+..+|||||+--=+ ++.+ .+|.
T Consensus 101 ~~tILVGHsL~nDL~aL~l--~hp~ 123 (174)
T cd06143 101 LGCIFVGHGLAKDFRVINI--QVPK 123 (174)
T ss_pred CCCEEEeccchhHHHHhcC--cCCC
Confidence 56799999998855 4443 2553
No 303
>KOG1752 consensus Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]
Probab=34.76 E-value=1.6e+02 Score=20.63 Aligned_cols=79 Identities=13% Similarity=0.123 Sum_probs=50.0
Q ss_pred CCceEEEEcCCCCChhhhhhhHHHhhcCCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhCCCceEEEEeC
Q 045774 23 GQSIIVFSHGFGSDQSVWSRVIPSFTRAYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALEIDRCAFVGHS 102 (275)
Q Consensus 23 g~~~ivllHG~~~~~~~w~~~~~~l~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS 102 (275)
..|+|+|.--++.....-+.+...+.-.+.|+-+|...+|. ++-+.+..+.-+-....+.+=|.+
T Consensus 13 ~~~VVifSKs~C~~c~~~k~ll~~~~v~~~vvELD~~~~g~---------------eiq~~l~~~tg~~tvP~vFI~Gk~ 77 (104)
T KOG1752|consen 13 ENPVVIFSKSSCPYCHRAKELLSDLGVNPKVVELDEDEDGS---------------EIQKALKKLTGQRTVPNVFIGGKF 77 (104)
T ss_pred cCCEEEEECCcCchHHHHHHHHHhCCCCCEEEEccCCCCcH---------------HHHHHHHHhcCCCCCCEEEECCEE
Confidence 34688898877776666666666666678999998765541 222233333222234557777999
Q ss_pred hhHHHHHHHHHhCC
Q 045774 103 VSAMIGLLAAIHRP 116 (275)
Q Consensus 103 ~GG~val~~a~~~p 116 (275)
.||.--+......-
T Consensus 78 iGG~~dl~~lh~~G 91 (104)
T KOG1752|consen 78 IGGASDLMALHKSG 91 (104)
T ss_pred EcCHHHHHHHHHcC
Confidence 99998766554443
No 304
>PRK14974 cell division protein FtsY; Provisional
Probab=33.49 E-value=2.2e+02 Score=24.69 Aligned_cols=65 Identities=18% Similarity=0.168 Sum_probs=43.0
Q ss_pred cCCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhCCCceEEEEeChhHHHHHHHHHhCCc--cccceeee
Q 045774 49 RAYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALEIDRCAFVGHSVSAMIGLLAAIHRPN--LFSRLILI 125 (275)
Q Consensus 49 ~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~GG~val~~a~~~p~--~v~~lvli 125 (275)
.++.++.+|-+|.... =..+.+.+..+.+....+.++||.-+.-|.-++..+..+.+ .+.++|+.
T Consensus 221 ~~~DvVLIDTaGr~~~------------~~~lm~eL~~i~~~~~pd~~iLVl~a~~g~d~~~~a~~f~~~~~~~giIlT 287 (336)
T PRK14974 221 RGIDVVLIDTAGRMHT------------DANLMDELKKIVRVTKPDLVIFVGDALAGNDAVEQAREFNEAVGIDGVILT 287 (336)
T ss_pred CCCCEEEEECCCccCC------------cHHHHHHHHHHHHhhCCceEEEeeccccchhHHHHHHHHHhcCCCCEEEEe
Confidence 3578999998877532 13455666777766667778888887777766665554432 45666653
No 305
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=33.39 E-value=2.9e+02 Score=23.12 Aligned_cols=38 Identities=26% Similarity=0.272 Sum_probs=25.4
Q ss_pred chhHHHHHHHHHH-HHhC-CCceEEEEeChhHHHHHHHHH
Q 045774 76 TLDGYVDDLLSFL-DALE-IDRCAFVGHSVSAMIGLLAAI 113 (275)
Q Consensus 76 ~~~~~a~dl~~~l-~~l~-~~~~~lvGhS~GG~val~~a~ 113 (275)
.++.-+.+....+ +... .+++.++|.|-|++.|-.+|.
T Consensus 72 g~~~~I~~ay~~l~~~~~~gd~I~lfGFSRGA~~AR~~a~ 111 (277)
T PF09994_consen 72 GIEARIRDAYRFLSKNYEPGDRIYLFGFSRGAYTARAFAN 111 (277)
T ss_pred chHHHHHHHHHHHHhccCCcceEEEEecCccHHHHHHHHH
Confidence 3455555444443 4443 456899999999999987764
No 306
>PF03681 UPF0150: Uncharacterised protein family (UPF0150); InterPro: IPR005357 This family of small proteins is uncharacterised. In Q9A3L8 from SWISSPROT this domain is found next to a DNA binding helix-turn-helix domain IPR002145 from INTERPRO, which suggests that this is some kind of ligand binding domain.; PDB: 2DSY_C 2YZT_A 3KWR_A.
Probab=33.39 E-value=77 Score=18.29 Aligned_cols=32 Identities=19% Similarity=0.106 Sum_probs=22.7
Q ss_pred CCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHH
Q 045774 50 AYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDA 90 (275)
Q Consensus 50 ~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~ 90 (275)
.|-+.++|+||+-. ...|+++-.+.+.+.+..
T Consensus 13 ~y~~~~pdlpg~~t---------~G~t~eea~~~~~eal~~ 44 (48)
T PF03681_consen 13 GYVAYFPDLPGCFT---------QGDTLEEALENAKEALEL 44 (48)
T ss_dssp SEEEEETTCCTCEE---------EESSHHHHHHHHHHHHHH
T ss_pred eEEEEeCCccChhh---------cCCCHHHHHHHHHHHHHH
Confidence 58999999998841 123677777777777653
No 307
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=32.87 E-value=76 Score=26.12 Aligned_cols=25 Identities=16% Similarity=0.151 Sum_probs=19.2
Q ss_pred eEEEEeChhHHHHHHHHHhCC-cccc
Q 045774 96 CAFVGHSVSAMIGLLAAIHRP-NLFS 120 (275)
Q Consensus 96 ~~lvGhS~GG~val~~a~~~p-~~v~ 120 (275)
-.+.|-|.|+.+|..++...+ +++.
T Consensus 32 d~i~GtSAGAl~aa~~a~g~~~~~~~ 57 (245)
T cd07218 32 NKISGASAGALAACCLLCDLPLGEMT 57 (245)
T ss_pred CeEEEEcHHHHHHHHHHhCCcHHHHH
Confidence 349999999999998887654 4433
No 308
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=32.73 E-value=78 Score=26.18 Aligned_cols=28 Identities=18% Similarity=0.194 Sum_probs=21.0
Q ss_pred ceEEEEeChhHHHHHHHHHhCC-ccccce
Q 045774 95 RCAFVGHSVSAMIGLLAAIHRP-NLFSRL 122 (275)
Q Consensus 95 ~~~lvGhS~GG~val~~a~~~p-~~v~~l 122 (275)
.-.++|-|.|+.++..++...+ +++..+
T Consensus 33 ~~~i~GtSAGAl~aa~~asg~~~~~~~~~ 61 (252)
T cd07221 33 ARMFFGASAGALHCVTFLSGLPLDQILQI 61 (252)
T ss_pred CCEEEEEcHHHHHHHHHHhCCCHHHHHHH
Confidence 4579999999999998887665 444433
No 309
>PRK00103 rRNA large subunit methyltransferase; Provisional
Probab=32.53 E-value=1.3e+02 Score=22.93 Aligned_cols=53 Identities=15% Similarity=0.197 Sum_probs=32.5
Q ss_pred HHhhcCCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhCCCceEEEEeChhHHHHH
Q 045774 45 PSFTRAYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALEIDRCAFVGHSVSAMIGL 109 (275)
Q Consensus 45 ~~l~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~GG~val 109 (275)
..+..+-.+|++|-.|-=. |-+++|+.+....+.-.-+=+.+||-+.|=.-..
T Consensus 62 ~~l~~~~~~i~LDe~Gk~~------------sS~~fA~~l~~~~~~g~~~i~F~IGGa~G~~~~v 114 (157)
T PRK00103 62 AALPKGARVIALDERGKQL------------SSEEFAQELERWRDDGRSDVAFVIGGADGLSPAV 114 (157)
T ss_pred hhCCCCCEEEEEcCCCCcC------------CHHHHHHHHHHHHhcCCccEEEEEcCccccCHHH
Confidence 3444456799999876632 2366777777663322124478889888854443
No 310
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=31.72 E-value=3.5e+02 Score=24.07 Aligned_cols=93 Identities=16% Similarity=0.165 Sum_probs=50.7
Q ss_pred eEEEEcCCCCChhhh-----hhhHHHhhc-CCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHH---hCCCce
Q 045774 26 IIVFSHGFGSDQSVW-----SRVIPSFTR-AYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDA---LEIDRC 96 (275)
Q Consensus 26 ~ivllHG~~~~~~~w-----~~~~~~l~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~---l~~~~~ 96 (275)
++|+++-. +..+| ...+..|.+ ++.|+ ...+|+=.+... ...+..+.+++.+.+...+.. +..+++
T Consensus 114 plviaPam--n~~m~~~p~~~~Nl~~L~~~G~~vv-~P~~g~~ac~~~--g~g~~~~~~~i~~~v~~~~~~~~~~~~~~v 188 (390)
T TIGR00521 114 PIILAPAM--NENMYNNPAVQENIKRLKDDGYIFI-EPDSGLLACGDE--GKGRLAEPETIVKAAEREFSPKEDLEGKRV 188 (390)
T ss_pred CEEEEeCC--ChhhcCCHHHHHHHHHHHHCCcEEE-CCCCcccccccc--cCCCCCCHHHHHHHHHHHHhhccccCCceE
Confidence 57787763 44455 455566766 44444 333443222111 112233578888888887754 444555
Q ss_pred EEEEe------------------ChhHHHHHHHHHhCCccccceeeecC
Q 045774 97 AFVGH------------------SVSAMIGLLAAIHRPNLFSRLILIGG 127 (275)
Q Consensus 97 ~lvGh------------------S~GG~val~~a~~~p~~v~~lvli~~ 127 (275)
.+-|- .||..+|..++.+- ..++++.+
T Consensus 189 lit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~G----a~V~~~~g 233 (390)
T TIGR00521 189 LITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRG----ADVTLITG 233 (390)
T ss_pred EEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCC----CEEEEeCC
Confidence 55555 36677777766533 44566554
No 311
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=31.56 E-value=86 Score=23.56 Aligned_cols=29 Identities=21% Similarity=0.095 Sum_probs=20.7
Q ss_pred HHHHHHHhCC--CceEEEEeChhHHHHHHHH
Q 045774 84 LLSFLDALEI--DRCAFVGHSVSAMIGLLAA 112 (275)
Q Consensus 84 l~~~l~~l~~--~~~~lvGhS~GG~val~~a 112 (275)
+.+.+++.++ .--.+.|-|.|+.++..++
T Consensus 16 vl~~l~~~~~~~~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 16 VLSALAERGLLDCVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred HHHHHHHhCCccCCCEEEEEcHHHHHHHHHh
Confidence 3334444455 4567889999999998887
No 312
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=31.34 E-value=2.3e+02 Score=22.94 Aligned_cols=57 Identities=12% Similarity=0.268 Sum_probs=30.7
Q ss_pred eEEEEcCCCCChhhhhhhHHHhhc--CC-EEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhCCCceEEE
Q 045774 26 IIVFSHGFGSDQSVWSRVIPSFTR--AY-RVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALEIDRCAFV 99 (275)
Q Consensus 26 ~ivllHG~~~~~~~w~~~~~~l~~--~~-~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lv 99 (275)
.|++.||...++...-..++..-. +| .|...-.-|+ . .++++.+-++..+++.++|+
T Consensus 140 ~vlmgHGt~h~s~~~YacLd~~~~~~~f~~v~v~~ve~y-------------P----~~d~vi~~l~~~~~~~v~L~ 199 (265)
T COG4822 140 LVLMGHGTDHHSNAAYACLDHVLDEYGFDNVFVAAVEGY-------------P----LVDTVIEYLRKNGIKEVHLI 199 (265)
T ss_pred EEEEecCCCccHHHHHHHHHHHHHhcCCCceEEEEecCC-------------C----cHHHHHHHHHHcCCceEEEe
Confidence 677788877666555455554322 34 3333322222 1 23456666677777776654
No 313
>PRK13512 coenzyme A disulfide reductase; Provisional
Probab=30.70 E-value=78 Score=28.42 Aligned_cols=46 Identities=24% Similarity=0.219 Sum_probs=30.9
Q ss_pred HHHHHHHHHHhCCCceEEEEeChhHHHHHHHHHhCCccccceeeecCCC
Q 045774 81 VDDLLSFLDALEIDRCAFVGHSVSAMIGLLAAIHRPNLFSRLILIGGSP 129 (275)
Q Consensus 81 a~dl~~~l~~l~~~~~~lvGhS~GG~val~~a~~~p~~v~~lvli~~~~ 129 (275)
++.+.+.+.....+++++|| ||.+++++|...-.+=+.+.++...+
T Consensus 136 ~~~l~~~l~~~~~~~vvViG---gG~ig~E~A~~l~~~g~~Vtli~~~~ 181 (438)
T PRK13512 136 TDAIDQFIKANQVDKALVVG---AGYISLEVLENLYERGLHPTLIHRSD 181 (438)
T ss_pred HHHHHHHHhhcCCCEEEEEC---CCHHHHHHHHHHHhCCCcEEEEeccc
Confidence 34444555444457899999 78999998876555556777776543
No 314
>PF03283 PAE: Pectinacetylesterase
Probab=30.17 E-value=1.3e+02 Score=26.51 Aligned_cols=35 Identities=17% Similarity=0.158 Sum_probs=23.6
Q ss_pred CCceEEEEeChhHHHHHHHH----HhCCccccceeeecC
Q 045774 93 IDRCAFVGHSVSAMIGLLAA----IHRPNLFSRLILIGG 127 (275)
Q Consensus 93 ~~~~~lvGhS~GG~val~~a----~~~p~~v~~lvli~~ 127 (275)
.++++|-|-|-||.-++..+ .+.|..++-..+.|+
T Consensus 155 a~~vlltG~SAGG~g~~~~~d~~~~~lp~~~~v~~~~Ds 193 (361)
T PF03283_consen 155 AKQVLLTGCSAGGLGAILHADYVRDRLPSSVKVKCLSDS 193 (361)
T ss_pred cceEEEeccChHHHHHHHHHHHHHHHhccCceEEEeccc
Confidence 35799999999999987643 446654444444444
No 315
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=29.39 E-value=1.2e+02 Score=26.51 Aligned_cols=84 Identities=15% Similarity=0.270 Sum_probs=61.0
Q ss_pred eEEEEcCCCCCh-------hhhhhhHHHhhcCCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhCCCceEE
Q 045774 26 IIVFSHGFGSDQ-------SVWSRVIPSFTRAYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALEIDRCAF 98 (275)
Q Consensus 26 ~ivllHG~~~~~-------~~w~~~~~~l~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~l 98 (275)
.++++|+-..++ +-|..+.+.+.+.-.+-.+|+...|..+. +++..|..+.-+++. ..-++
T Consensus 199 s~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaSG---------~~d~DA~avR~F~~~---g~~~~ 266 (427)
T KOG1411|consen 199 SIILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQGFASG---------DLDKDAQAVRLFVED---GHEIL 266 (427)
T ss_pred cEEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhhcccccC---------CchhhHHHHHHHHHc---CCceE
Confidence 589999866555 58999998888877777888888886532 356667777777664 45578
Q ss_pred EEeChhHHHHHHHHHhCCccccceeeec
Q 045774 99 VGHSVSAMIGLLAAIHRPNLFSRLILIG 126 (275)
Q Consensus 99 vGhS~GG~val~~a~~~p~~v~~lvli~ 126 (275)
+..|+-=..+| |.|||.++.++.
T Consensus 267 laQSyAKNMGL-----YgERvGa~svvc 289 (427)
T KOG1411|consen 267 LAQSYAKNMGL-----YGERVGALSVVC 289 (427)
T ss_pred eehhhhhhcch-----hhhccceeEEEe
Confidence 88887655553 578998886664
No 316
>COG3621 Patatin [General function prediction only]
Probab=28.73 E-value=1.6e+02 Score=25.57 Aligned_cols=58 Identities=16% Similarity=0.278 Sum_probs=35.5
Q ss_pred HHhhcCCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhCCC----ceEEE-EeChhHHHHHHHHHhCCc
Q 045774 45 PSFTRAYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALEID----RCAFV-GHSVSAMIGLLAAIHRPN 117 (275)
Q Consensus 45 ~~l~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~~----~~~lv-GhS~GG~val~~a~~~p~ 117 (275)
+++..+|++..+|==|. .-.+..++...+++...+ .+.++ |-|.||.+++.+|+-.+.
T Consensus 3 e~~msk~rIlsldGGGv---------------rG~i~lE~lr~ieqiqGkkl~e~FDl~~GTSiGgilal~La~~ks~ 65 (394)
T COG3621 3 EHLMSKYRILSLDGGGV---------------RGAILLEKLRIIEQIQGKKLCEYFDLIGGTSIGGILALGLALGKSP 65 (394)
T ss_pred cccccceeEEEecCCcc---------------ccHHHHHHHHHHHHHhCCcceeeEeeecCccHHHHHHHHHhcCCCC
Confidence 34455789988872111 113444555666654322 35555 999999999998865443
No 317
>COG2205 KdpD Osmosensitive K+ channel histidine kinase [Signal transduction mechanisms]
Probab=28.48 E-value=5.8e+02 Score=25.34 Aligned_cols=90 Identities=11% Similarity=0.153 Sum_probs=57.1
Q ss_pred CCceEEEEcCCCCChhhhhh---hHHHhhcCCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhCCCceEEE
Q 045774 23 GQSIIVFSHGFGSDQSVWSR---VIPSFTRAYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALEIDRCAFV 99 (275)
Q Consensus 23 g~~~ivllHG~~~~~~~w~~---~~~~l~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lv 99 (275)
++..+|++-|.+.+...=+. +.+.+...|.++.+|.+..=.+.. -=....+....+.++||-+-+.+.
T Consensus 248 ~e~ilvcI~~~~~~e~liR~a~RlA~~~~a~~~av~v~~~~~~~~~~---------~~~~~l~~~~~Lae~lGae~~~l~ 318 (890)
T COG2205 248 RERILVCISGSPGSEKLIRRAARLASRLHAKWTAVYVETPELHRLSE---------KEARRLHENLRLAEELGAEIVTLY 318 (890)
T ss_pred cceEEEEECCCCchHHHHHHHHHHHHHhCCCeEEEEEeccccccccH---------HHHHHHHHHHHHHHHhCCeEEEEe
Confidence 44578888888777754443 445555579999998775422210 013455666777788888888888
Q ss_pred EeChhHHHHHHHHHhCCccccceee
Q 045774 100 GHSVSAMIGLLAAIHRPNLFSRLIL 124 (275)
Q Consensus 100 GhS~GG~val~~a~~~p~~v~~lvl 124 (275)
|.+.+..++ .+|..+ .+.++|+
T Consensus 319 ~~dv~~~i~-~ya~~~--~~TkiVi 340 (890)
T COG2205 319 GGDVAKAIA-RYAREH--NATKIVI 340 (890)
T ss_pred CCcHHHHHH-HHHHHc--CCeeEEe
Confidence 888887774 334332 4555553
No 318
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=28.41 E-value=59 Score=29.13 Aligned_cols=39 Identities=13% Similarity=0.105 Sum_probs=22.4
Q ss_pred CcEEEEEeCCCCCCCHHHHHHHHHHcCCCccEEEcCCCCCCCC
Q 045774 214 VPVCIIQSSVDLSVPPAVAEYMRRHLGGPTVLEFLPTHGHLPH 256 (275)
Q Consensus 214 ~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~ 256 (275)
.-++++.|+.|+........ .........+|++++|+.=
T Consensus 377 tnviFtNG~~DPW~~lgv~~----~~~~~~~~~~I~g~~Hc~D 415 (434)
T PF05577_consen 377 TNVIFTNGELDPWRALGVTS----DSSDSVPAIVIPGGAHCSD 415 (434)
T ss_dssp -SEEEEEETT-CCGGGS--S-----SSSSEEEEEETT--TTGG
T ss_pred CeEEeeCCCCCCcccccCCC----CCCCCcccEEECCCeeecc
Confidence 56899999999887666332 2232234567899999843
No 319
>TIGR03607 patatin-related protein. This bacterial protein family contains an N-terminal patatin domain, where patatins are plant storage proteins capable of phospholipase activity (see pfam01734). Regions of strong sequence conservation are separated by regions of significant sequence and length variability. Members of the family are distributed sporadically among bacteria. The function is unknown.
Probab=27.51 E-value=79 Score=30.65 Aligned_cols=23 Identities=26% Similarity=0.352 Sum_probs=18.7
Q ss_pred hCCCceEEEEeChhHHHHHHHHH
Q 045774 91 LEIDRCAFVGHSVSAMIGLLAAI 113 (275)
Q Consensus 91 l~~~~~~lvGhS~GG~val~~a~ 113 (275)
+++.--++.|.|.||+++..+|.
T Consensus 63 ~~~~~d~iaGTSAGAInaa~lA~ 85 (739)
T TIGR03607 63 LRVRVDVISGTSAGGINGVLLAY 85 (739)
T ss_pred cCCCCceEEeeCHHHHHHHHHHc
Confidence 34556788999999999888875
No 320
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=26.85 E-value=1.1e+02 Score=25.36 Aligned_cols=22 Identities=14% Similarity=-0.004 Sum_probs=18.1
Q ss_pred ceEEEEeChhHHHHHHHHHhCC
Q 045774 95 RCAFVGHSVSAMIGLLAAIHRP 116 (275)
Q Consensus 95 ~~~lvGhS~GG~val~~a~~~p 116 (275)
.-.++|-|.|+.++..++...+
T Consensus 37 ~~~i~G~SAGAl~aa~~a~g~~ 58 (249)
T cd07220 37 ARKIYGASAGALTATALVTGVC 58 (249)
T ss_pred CCeEEEEcHHHHHHHHHHcCCC
Confidence 3568899999999998887654
No 321
>cd00382 beta_CA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=26.78 E-value=80 Score=22.65 Aligned_cols=31 Identities=13% Similarity=0.218 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHhCCCceEEEEeChhHHHHH
Q 045774 79 GYVDDLLSFLDALEIDRCAFVGHSVSAMIGL 109 (275)
Q Consensus 79 ~~a~dl~~~l~~l~~~~~~lvGhS~GG~val 109 (275)
.....+.-.+..|+.+.++++|||--|++..
T Consensus 44 ~~~~sl~~av~~l~v~~ivV~gHt~CG~v~a 74 (119)
T cd00382 44 DVLASLEYAVEVLGVKHIIVCGHTDCGAVKA 74 (119)
T ss_pred cHHHHHHHHHHhhCCCEEEEEccCCCcHHHH
Confidence 3555666777889999999999998887754
No 322
>PF08133 Nuclease_act: Anticodon nuclease activator family; InterPro: IPR012585 This family consists of the anticodon nuclease activator proteins. Pre-existing host tRNAs are reprocessed during Bacteriophage T4 infection of certain Escherichia coli strains. In this pathway, tRNA(Lys) is cleaved 5, by the anticodon nuclease to the wobble base and is later restored in polynucleotide kinase and RNA ligase reactions [].; GO: 0004518 nuclease activity, 0050792 regulation of viral reproduction
Probab=26.72 E-value=32 Score=16.94 Aligned_cols=21 Identities=24% Similarity=0.420 Sum_probs=15.4
Q ss_pred CCCCCCcchhHhhhhceEEec
Q 045774 1 MANYNNRGEFLLEALNVRVVG 21 (275)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~g 21 (275)
|.+|-+++.+++-+...+..|
T Consensus 1 msn~hnehvmqfyr~nlk~~g 21 (26)
T PF08133_consen 1 MSNFHNEHVMQFYRHNLKTKG 21 (26)
T ss_pred CcchhHHHHHHHHHhhccccc
Confidence 677888888887777666544
No 323
>COG2062 SixA Phosphohistidine phosphatase SixA [Signal transduction mechanisms]
Probab=26.34 E-value=1.5e+02 Score=22.80 Aligned_cols=72 Identities=18% Similarity=0.140 Sum_probs=42.9
Q ss_pred ceEEEEcCCCCChhhhhhhHHHhhcCCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhCCCceEEEEe--C
Q 045774 25 SIIVFSHGFGSDQSVWSRVIPSFTRAYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALEIDRCAFVGH--S 102 (275)
Q Consensus 25 ~~ivllHG~~~~~~~w~~~~~~l~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGh--S 102 (275)
+..|++-..-...+.|..+...+...-.++..++--.| +...+.+.+.++-+ +...+.|||| +
T Consensus 48 ~D~VL~Spa~Ra~QTae~v~~~~~~~~~~~~~~l~p~~-------------d~~~~l~~l~~~~d--~v~~vllVgH~P~ 112 (163)
T COG2062 48 PDLVLVSPAVRARQTAEIVAEHLGEKKVEVFEELLPNG-------------DPGTVLDYLEALGD--GVGSVLLVGHNPL 112 (163)
T ss_pred CCEEEeChhHHHHHHHHHHHHhhCcccceeccccCCCC-------------CHHHHHHHHHHhcc--cCceEEEECCCcc
Confidence 45778877777788888888888743222222222111 23444444444444 4678999999 5
Q ss_pred hhHHHHHHH
Q 045774 103 VSAMIGLLA 111 (275)
Q Consensus 103 ~GG~val~~ 111 (275)
||-.+....
T Consensus 113 l~~l~~~L~ 121 (163)
T COG2062 113 LEELALLLA 121 (163)
T ss_pred HHHHHHHHc
Confidence 666655443
No 324
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=25.95 E-value=2.5e+02 Score=23.53 Aligned_cols=60 Identities=17% Similarity=0.105 Sum_probs=40.6
Q ss_pred CCcEEEEEeCC------CCCCCHHHHHHHHHHcCCCcc-----EEEcCCCCCCCCCCChHHHHHHHHHHHHh
Q 045774 213 RVPVCIIQSSV------DLSVPPAVAEYMRRHLGGPTV-----LEFLPTHGHLPHVSSPAPVANAIQQLLRR 273 (275)
Q Consensus 213 ~~P~l~i~G~~------D~~~~~~~~~~~~~~~~~~~~-----~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 273 (275)
.+-++.|.|+- |..+|..-+-.....+++... +..=+++-|.-+.|+|... +.+..||-+
T Consensus 216 ~~evl~IaGDl~dg~~tDG~Vp~assls~~~lf~~~~ksy~e~~~~Gk~a~Hs~lhen~~v~-~yv~~FLw~ 286 (288)
T COG4814 216 NTEVLLIAGDLDDGKQTDGAVPWASSLSIYHLFKKNGKSYIESLYKGKDARHSKLHENPTVA-KYVKNFLWE 286 (288)
T ss_pred CcEEEEEecccccCCcCCCceechHhHHHHHHhccCcceeEEEeeeCCcchhhccCCChhHH-HHHHHHhhc
Confidence 56689999984 456777666666666655421 2222578999999998754 677777754
No 325
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=25.83 E-value=84 Score=26.70 Aligned_cols=17 Identities=24% Similarity=0.438 Sum_probs=14.9
Q ss_pred EEEEeChhHHHHHHHHH
Q 045774 97 AFVGHSVSAMIGLLAAI 113 (275)
Q Consensus 97 ~lvGhS~GG~val~~a~ 113 (275)
.+.|-|.||.+|+.++.
T Consensus 44 li~GTStGgiiA~~la~ 60 (308)
T cd07211 44 YICGVSTGAILAFLLGL 60 (308)
T ss_pred EEEecChhHHHHHHHhc
Confidence 57799999999998875
No 326
>cd02696 MurNAc-LAA N-acetylmuramoyl-L-alanine amidase or MurNAc-LAA (also known as peptidoglycan aminohydrolase, NAMLA amidase, NAMLAA, Amidase 3, and peptidoglycan amidase; EC 3.5.1.28) is an autolysin that hydrolyzes the amide bond between N-acetylmuramoyl and L-amino acids in certain cell wall glycopeptides. These proteins are Zn-dependent peptidases with highly conserved residues involved in cation co-ordination. MurNAc-LAA in this family is one of several peptidoglycan hydrolases (PGHs) found in bacterial and bacteriophage or prophage genomes that are involved in the degradation of the peptidoglycan. In Escherichia coli, there are five MurNAc-LAAs present: AmiA, AmiB, AmiC and AmiD that are periplasmic, and AmpD that is cytoplasmic. Three of these (AmiA, AmiB and AmiC) belong to this family, the other two (AmiD and AmpD) do not. E. coli AmiA, AmiB and AmiC play an important role in cleaving the septum to release daughter cells after cell division. In general, bacterial MurNAc-LAAs
Probab=25.46 E-value=1e+02 Score=23.38 Aligned_cols=39 Identities=21% Similarity=0.127 Sum_probs=20.1
Q ss_pred EEEccCCCCCCCCCCCCc---ccccchhHHHHHHHHHHHHhCC
Q 045774 54 ISFDLMCSGSCDPTNYDF---QRYATLDGYVDDLLSFLDALEI 93 (275)
Q Consensus 54 ia~Dl~G~G~S~~~~~~~---~~~~~~~~~a~dl~~~l~~l~~ 93 (275)
|++| +|||.+++..... ..+.-..+++..+...|++.|.
T Consensus 2 v~ld-~GHg~~~~Ga~~~~g~~E~~~~~~ia~~l~~~L~~~G~ 43 (172)
T cd02696 2 IVID-PGHGGKDPGAVGNDGLKEKDINLAIALKLAKLLEAAGA 43 (172)
T ss_pred EEEe-CCCCCCCCCCcCCCCCchHHHHHHHHHHHHHHHHHCCC
Confidence 4555 8999887521111 1111134556666666666543
No 327
>COG0860 AmiC N-acetylmuramoyl-L-alanine amidase [Cell envelope biogenesis, outer membrane]
Probab=24.78 E-value=2e+02 Score=23.39 Aligned_cols=40 Identities=20% Similarity=0.187 Sum_probs=26.1
Q ss_pred CEEEEEccCCCCCCCCCCCC----cccccchhHHHHHHHHHHHHhC
Q 045774 51 YRVISFDLMCSGSCDPTNYD----FQRYATLDGYVDDLLSFLDALE 92 (275)
Q Consensus 51 ~~via~Dl~G~G~S~~~~~~----~~~~~~~~~~a~dl~~~l~~l~ 92 (275)
-.+|.+| ||||..++..-. .++-. .-+.+..+.+.|++.+
T Consensus 42 ~~~I~ID-pGHGG~D~GAig~~g~~EKdv-tL~ia~~l~~~L~~~g 85 (231)
T COG0860 42 GKTIVID-PGHGGKDPGAIGPNGTLEKDV-TLDIAKRLRDLLRAEG 85 (231)
T ss_pred CeEEEEc-CCCCCCCCCccCCCCCcccee-HHHHHHHHHHHHHhCC
Confidence 5789999 999998762111 22222 2356777888888777
No 328
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=24.78 E-value=65 Score=28.06 Aligned_cols=18 Identities=22% Similarity=0.220 Sum_probs=15.5
Q ss_pred EEEEeChhHHHHHHHHHh
Q 045774 97 AFVGHSVSAMIGLLAAIH 114 (275)
Q Consensus 97 ~lvGhS~GG~val~~a~~ 114 (275)
.+.|-|.||.+|+.++..
T Consensus 44 lIaGTStGgIIAa~la~g 61 (344)
T cd07217 44 FVGGTSTGSIIAACIALG 61 (344)
T ss_pred EEEEecHHHHHHHHHHcC
Confidence 667999999999998763
No 329
>TIGR00064 ftsY signal recognition particle-docking protein FtsY. There is a weak division between FtsY and SRP54; both are GTPases. In E.coli, ftsY is an essential gene located in an operon with cell division genes ftsE and ftsX, but its apparent function is as the signal recognition particle docking protein.
Probab=24.52 E-value=4.2e+02 Score=22.13 Aligned_cols=68 Identities=16% Similarity=0.102 Sum_probs=38.8
Q ss_pred HhhcCCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhC------CCceEEEEeChhHHHHHHHHHhCCc--
Q 045774 46 SFTRAYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALE------IDRCAFVGHSVSAMIGLLAAIHRPN-- 117 (275)
Q Consensus 46 ~l~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~------~~~~~lvGhS~GG~val~~a~~~p~-- 117 (275)
...++|.++.+|-+|....+ ..+.+++..+.+... ...++||--+.-|.-++..+..+-+
T Consensus 150 ~~~~~~D~ViIDT~G~~~~d------------~~~~~el~~~~~~~~~~~~~~~~~~~LVl~a~~~~~~~~~~~~f~~~~ 217 (272)
T TIGR00064 150 AKARNIDVVLIDTAGRLQNK------------VNLMDELKKIKRVIKKVDKDAPDEVLLVLDATTGQNALEQAKVFNEAV 217 (272)
T ss_pred HHHCCCCEEEEeCCCCCcch------------HHHHHHHHHHHHHHhcccCCCCceEEEEEECCCCHHHHHHHHHHHhhC
Confidence 34567999999999987532 234444444444333 4556777666555555544433322
Q ss_pred cccceeee
Q 045774 118 LFSRLILI 125 (275)
Q Consensus 118 ~v~~lvli 125 (275)
.+.++|+.
T Consensus 218 ~~~g~IlT 225 (272)
T TIGR00064 218 GLTGIILT 225 (272)
T ss_pred CCCEEEEE
Confidence 35566653
No 330
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=24.50 E-value=90 Score=23.53 Aligned_cols=22 Identities=23% Similarity=0.123 Sum_probs=16.9
Q ss_pred CCceEEEEeChhHHHHHHHHHh
Q 045774 93 IDRCAFVGHSVSAMIGLLAAIH 114 (275)
Q Consensus 93 ~~~~~lvGhS~GG~val~~a~~ 114 (275)
..--.+.|-|.||.+|+.++..
T Consensus 26 ~~~d~i~GtS~Gal~a~~~~~~ 47 (204)
T PF01734_consen 26 ERFDVISGTSAGALNAALLALG 47 (204)
T ss_dssp CT-SEEEEECCHHHHHHHHHTC
T ss_pred CCccEEEEcChhhhhHHHHHhC
Confidence 3446788999999999777654
No 331
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=24.22 E-value=4.8e+02 Score=22.72 Aligned_cols=35 Identities=14% Similarity=0.214 Sum_probs=25.5
Q ss_pred EEEEcCCCCChhhhhhhHHHhhc-CCEEEEEccCCCCC
Q 045774 27 IVFSHGFGSDQSVWSRVIPSFTR-AYRVISFDLMCSGS 63 (275)
Q Consensus 27 ivllHG~~~~~~~w~~~~~~l~~-~~~via~Dl~G~G~ 63 (275)
|||+|... +.-|+.+++.|.+ +++|..+-..+.+.
T Consensus 2 il~~~~~~--p~~~~~la~~L~~~G~~v~~~~~~~~~~ 37 (396)
T cd03818 2 ILFVHQNF--PGQFRHLAPALAAQGHEVVFLTEPNAAP 37 (396)
T ss_pred EEEECCCC--chhHHHHHHHHHHCCCEEEEEecCCCCC
Confidence 78999853 2447889998876 68888876666554
No 332
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=24.14 E-value=93 Score=25.89 Aligned_cols=50 Identities=14% Similarity=0.165 Sum_probs=32.1
Q ss_pred CCCCcEEEEEeCCCC---------CCCHHH-HHHHHHHcCCCccEEEcCCCCCCCCCCCh
Q 045774 211 LVRVPVCIIQSSVDL---------SVPPAV-AEYMRRHLGGPTVLEFLPTHGHLPHVSSP 260 (275)
Q Consensus 211 ~i~~P~l~i~G~~D~---------~~~~~~-~~~~~~~~~~~~~~~~i~~~gH~~~~e~p 260 (275)
+.++|+++|...-+. ..|... -+++....+..+-..++.+.||+=+++..
T Consensus 152 ~~~~P~lviGtGLg~~~~~~~~~~CaP~g~n~~~Ff~~~~~p~~~~v~~~~GH~d~LDd~ 211 (259)
T PF12740_consen 152 DFSMPALVIGTGLGGEPRNPLFPPCAPAGVNYREFFDECKPPSWHFVAKDYGHMDFLDDD 211 (259)
T ss_pred CCCCCeEEEecccCcccccccCCCCCCCCCCHHHHHHhcCCCEEEEEeCCCCchHhhcCC
Confidence 356999888766553 233332 23454555554445566899999999988
No 333
>PRK06029 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Provisional
Probab=24.13 E-value=3.3e+02 Score=21.36 Aligned_cols=58 Identities=17% Similarity=0.178 Sum_probs=34.9
Q ss_pred CCCceEEEEcCCCCChhhhh-----hhHHHhhc-CCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHH-HHHHhCCC
Q 045774 22 QGQSIIVFSHGFGSDQSVWS-----RVIPSFTR-AYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLS-FLDALEID 94 (275)
Q Consensus 22 ~g~~~ivllHG~~~~~~~w~-----~~~~~l~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~-~l~~l~~~ 94 (275)
.+. ++++++- ++|. ..+..|.+ ++.|+-+. +|+- ....|++++++.+.. ++|.||++
T Consensus 114 ~~~-pvii~P~-----~M~~~p~~~~Nl~~L~~~G~~vi~P~-~g~~---------a~p~~~~~~~~~~v~~~~~~l~~~ 177 (185)
T PRK06029 114 ERR-RLVLCVR-----ETPLHLGHLRNMTKLAEMGAIIMPPV-PAFY---------HRPQTLEDMVDQTVGRVLDLFGIE 177 (185)
T ss_pred cCC-CEEEEec-----cccCCHHHHHHHHHHHHCcCEEECCC-cccc---------cCCCCHHHHHHHHHHHHHHhcCCC
Confidence 344 5677772 4553 45566666 45555543 3442 112378999988654 88999876
Q ss_pred c
Q 045774 95 R 95 (275)
Q Consensus 95 ~ 95 (275)
.
T Consensus 178 ~ 178 (185)
T PRK06029 178 H 178 (185)
T ss_pred C
Confidence 4
No 334
>PF01520 Amidase_3: N-acetylmuramoyl-L-alanine amidase; InterPro: IPR002508 The cell wall envelope of Gram-positive bacteria is a macromolecular, exoskeletal organelle that is assembled and turned over at designated sites. The cell wall also functions as a surface organelle that allows Gram-positive pathogens to interact with their environment, in particular the tissues of the infected host. All of these functions require that surface proteins and enzymes be properly targeted to the cell wall envelope. Two basic mechanisms, cell wall sorting and targeting, have been identified. Cell well sorting is the covalent attachment of surface proteins to the peptidoglycan via a C-terminal sorting signal that contains a consensus LPXTG sequence. More than 100 proteins that possess cell wall-sorting signals, including the M proteins of Streptococcus pyogenes, protein A of Staphylococcus aureus, and several internalins of Listeria monocytogenes, have been identified. Cell wall targeting involves the noncovalent attachment of proteins to the cell surface via specialised binding domains. Several of these wall-binding domains appear to interact with secondary wall polymers that are associated with the peptidoglycan, for example teichoic acids and polysaccharides. Proteins that are targeted to the cell surface include muralytic enzymes such as autolysins, lysostaphin, and phage lytic enzymes. Other examples for targeted proteins are the surface S-layer proteins of bacilli and clostridia, as well as virulence factors required for the pathogenesis of L. monocytogenes (internalin B) and Streptococcus pneumoniae (PspA) infections []. Autolysin 3.5.1.28 from EC hydrolyses the link between N-acetylmuramoyl residues and L-amino acid residues in certain bacterial cell wall glycopeptides.; GO: 0008745 N-acetylmuramoyl-L-alanine amidase activity, 0009253 peptidoglycan catabolic process; PDB: 3QAY_A 3CZX_A 1JWQ_A 1XOV_A 3NE8_A.
Probab=23.86 E-value=65 Score=24.54 Aligned_cols=38 Identities=18% Similarity=0.081 Sum_probs=20.0
Q ss_pred EEEccCCCCCCCCCCC---CcccccchhHHHHHHHHHHHHhC
Q 045774 54 ISFDLMCSGSCDPTNY---DFQRYATLDGYVDDLLSFLDALE 92 (275)
Q Consensus 54 ia~Dl~G~G~S~~~~~---~~~~~~~~~~~a~dl~~~l~~l~ 92 (275)
|++| ||||..++... ....+.-..+++..+.+.|++.|
T Consensus 1 I~id-pGHgg~d~Ga~~~~g~~E~~~~l~ia~~l~~~L~~~g 41 (175)
T PF01520_consen 1 IVID-PGHGGNDPGAVGPNGIREKDINLDIALRLKKELEKHG 41 (175)
T ss_dssp EEEE-EEEBTTBTSSBCTTSCBHHHHHHHHHHHHHHHHHHTT
T ss_pred CEEE-CCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHHHhcCC
Confidence 4555 89998765211 11111112355666667777666
No 335
>cd03379 beta_CA_cladeD Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=23.75 E-value=1.1e+02 Score=22.70 Aligned_cols=30 Identities=13% Similarity=0.166 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHhCCCceEEEEeChhHHHH
Q 045774 79 GYVDDLLSFLDALEIDRCAFVGHSVSAMIG 108 (275)
Q Consensus 79 ~~a~dl~~~l~~l~~~~~~lvGhS~GG~va 108 (275)
+....+.-.+..++.+.++++||+-=|++.
T Consensus 41 ~~~~sl~~av~~l~~~~IiV~gHt~Cg~~~ 70 (142)
T cd03379 41 DAIRSLVVSVYLLGTREIIVIHHTDCGMLT 70 (142)
T ss_pred hHHHHHHHHHHHhCCCEEEEEeecCCcceE
Confidence 345566677788899999999998666653
No 336
>PRK11613 folP dihydropteroate synthase; Provisional
Probab=23.68 E-value=4.5e+02 Score=22.21 Aligned_cols=16 Identities=38% Similarity=0.494 Sum_probs=12.3
Q ss_pred CCceEEEEeChhHHHH
Q 045774 93 IDRCAFVGHSVSAMIG 108 (275)
Q Consensus 93 ~~~~~lvGhS~GG~va 108 (275)
..-.+++|+|==+++.
T Consensus 210 lg~Pilvg~SRKsfig 225 (282)
T PRK11613 210 FNLPLLVGMSRKSMIG 225 (282)
T ss_pred CCCCEEEEecccHHHH
Confidence 4668999999766665
No 337
>PRK06731 flhF flagellar biosynthesis regulator FlhF; Validated
Probab=23.65 E-value=4.4e+02 Score=22.06 Aligned_cols=72 Identities=11% Similarity=0.101 Sum_probs=43.9
Q ss_pred hhhHHHhhc--CCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhCCCceEEEE-eChhHHHHHHHHHhCC-
Q 045774 41 SRVIPSFTR--AYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALEIDRCAFVG-HSVSAMIGLLAAIHRP- 116 (275)
Q Consensus 41 ~~~~~~l~~--~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvG-hS~GG~val~~a~~~p- 116 (275)
...+..+.+ ++.++.+|-+|....+ ....+.+.++++......++||- -++++--+...+.+|.
T Consensus 143 ~~~l~~l~~~~~~D~ViIDt~Gr~~~~------------~~~l~el~~~~~~~~~~~~~LVl~a~~~~~d~~~~~~~f~~ 210 (270)
T PRK06731 143 TRALTYFKEEARVDYILIDTAGKNYRA------------SETVEEMIETMGQVEPDYICLTLSASMKSKDMIEIITNFKD 210 (270)
T ss_pred HHHHHHHHhcCCCCEEEEECCCCCcCC------------HHHHHHHHHHHhhhCCCeEEEEEcCccCHHHHHHHHHHhCC
Confidence 333444543 6899999999885311 23444555666655555566665 4677777777766653
Q ss_pred ccccceee
Q 045774 117 NLFSRLIL 124 (275)
Q Consensus 117 ~~v~~lvl 124 (275)
-.+.++|+
T Consensus 211 ~~~~~~I~ 218 (270)
T PRK06731 211 IHIDGIVF 218 (270)
T ss_pred CCCCEEEE
Confidence 35667765
No 338
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=23.62 E-value=1.2e+02 Score=20.04 Aligned_cols=26 Identities=12% Similarity=-0.052 Sum_probs=18.6
Q ss_pred hCCCceEEEEeChhHHHHHHHHHhCC
Q 045774 91 LEIDRCAFVGHSVSAMIGLLAAIHRP 116 (275)
Q Consensus 91 l~~~~~~lvGhS~GG~val~~a~~~p 116 (275)
-+.+++.++|-|-|=-+|.+.++.+-
T Consensus 37 ~GpK~VLViGaStGyGLAsRIa~aFg 62 (78)
T PF12242_consen 37 NGPKKVLVIGASTGYGLASRIAAAFG 62 (78)
T ss_dssp TS-SEEEEES-SSHHHHHHHHHHHHC
T ss_pred CCCceEEEEecCCcccHHHHHHHHhc
Confidence 35578999999999888877766553
No 339
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=23.18 E-value=2.5e+02 Score=26.65 Aligned_cols=56 Identities=11% Similarity=0.135 Sum_probs=30.7
Q ss_pred hHhhhhceEEecCCCceEEEEcCCCCCh---hhhhhhHHHhhc-C--CEEEEEccCCCCCCC
Q 045774 10 FLLEALNVRVVGQGQSIIVFSHGFGSDQ---SVWSRVIPSFTR-A--YRVISFDLMCSGSCD 65 (275)
Q Consensus 10 ~~~~~~~~~~~g~g~~~ivllHG~~~~~---~~w~~~~~~l~~-~--~~via~Dl~G~G~S~ 65 (275)
.+.++-......+-+.|+|+|||--..- +.=..+...|.. + ++.+.+.--|||.+.
T Consensus 537 ~~~~~sp~~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~ 598 (620)
T COG1506 537 KYEDRSPIFYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSR 598 (620)
T ss_pred HHHhcChhhhhcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCC
Confidence 3344333333334345799999965433 222234455554 3 566666666787765
No 340
>PF12566 DUF3748: Protein of unknown function (DUF3748); InterPro: IPR022223 This domain family is found in bacteria and eukaryotes, and is approximately 120 amino acids in length.
Probab=22.89 E-value=84 Score=22.47 Aligned_cols=19 Identities=26% Similarity=0.431 Sum_probs=16.1
Q ss_pred eEEEEcCCCCChhhhhhhH
Q 045774 26 IIVFSHGFGSDQSVWSRVI 44 (275)
Q Consensus 26 ~ivllHG~~~~~~~w~~~~ 44 (275)
-++||||.-.....|.+-+
T Consensus 15 ryvFIHGpe~pd~~w~Ydf 33 (122)
T PF12566_consen 15 RYVFIHGPENPDAEWQYDF 33 (122)
T ss_pred eEEEEeCCCCCCCCCcccc
Confidence 6999999988888888754
No 341
>PRK07877 hypothetical protein; Provisional
Probab=22.63 E-value=1.3e+02 Score=29.11 Aligned_cols=37 Identities=30% Similarity=0.187 Sum_probs=28.5
Q ss_pred HHhCCCceEEEEeChhHHHHHHHHHhCCccccceeeecC
Q 045774 89 DALEIDRCAFVGHSVSAMIGLLAAIHRPNLFSRLILIGG 127 (275)
Q Consensus 89 ~~l~~~~~~lvGhS~GG~val~~a~~~p~~v~~lvli~~ 127 (275)
+.|...++.+||-++|+.++..+|..- -|..++++|.
T Consensus 103 ~~L~~~~V~IvG~GlGs~~a~~LaraG--vvG~l~lvD~ 139 (722)
T PRK07877 103 ERLGRLRIGVVGLSVGHAIAHTLAAEG--LCGELRLADF 139 (722)
T ss_pred HHHhcCCEEEEEecHHHHHHHHHHHcc--CCCeEEEEcC
Confidence 455567899999999999998887522 1488999875
No 342
>PRK03482 phosphoglycerate mutase; Provisional
Probab=22.39 E-value=2.4e+02 Score=22.30 Aligned_cols=34 Identities=21% Similarity=0.340 Sum_probs=22.6
Q ss_pred cchhHHHHHHHHHHHHh----CCCceEEEEeChhHHHHHH
Q 045774 75 ATLDGYVDDLLSFLDAL----EIDRCAFVGHSVSAMIGLL 110 (275)
Q Consensus 75 ~~~~~~a~dl~~~l~~l----~~~~~~lvGhS~GG~val~ 110 (275)
.++.++.+-+..+++.+ ..+++.+|+| ||.+...
T Consensus 120 Es~~~~~~Rv~~~l~~~~~~~~~~~vliVsH--g~~i~~l 157 (215)
T PRK03482 120 ESMQELSDRMHAALESCLELPQGSRPLLVSH--GIALGCL 157 (215)
T ss_pred ccHHHHHHHHHHHHHHHHHhCCCCeEEEEeC--cHHHHHH
Confidence 46777777777777654 2346889999 5555443
No 343
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase. Muramic delta-lactam is an unusual constituent of peptidoglycan, found only in bacterial spores in the peptidoglycan wall, or spore cortex. The proteins in this family are PdaA (yfjS), a member of a larger family of polysaccharide deacetylases, and are specificially involved in delta-lactam biosynthesis. PdaA acts immediately after CwlD, an N-acetylmuramoyl-L-alanine amidase and performs a de-N-acetylation. PdaA may also perform the following transpeptidation for lactam ring formation, as heterologous expression in E. coli of CwlD and PdaA together is sufficient for delta-lactam production.
Probab=22.36 E-value=95 Score=25.02 Aligned_cols=32 Identities=19% Similarity=0.420 Sum_probs=23.3
Q ss_pred eEEEEcCC-CCChhhhhhhHHHhhc-CCEEEEEc
Q 045774 26 IIVFSHGF-GSDQSVWSRVIPSFTR-AYRVISFD 57 (275)
Q Consensus 26 ~ivllHG~-~~~~~~w~~~~~~l~~-~~~via~D 57 (275)
.||++|.. ..+.+....+++.|.+ +|+.+.++
T Consensus 188 ~IiLlHd~~~~t~~aL~~ii~~lk~~Gy~fvtl~ 221 (224)
T TIGR02884 188 AILLLHAVSKDNAEALDKIIKDLKEQGYTFKSLD 221 (224)
T ss_pred cEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEhH
Confidence 58888863 4556777788888765 78888765
No 344
>KOG2248 consensus 3'-5' exonuclease [Replication, recombination and repair]
Probab=22.21 E-value=93 Score=27.50 Aligned_cols=42 Identities=24% Similarity=0.360 Sum_probs=27.8
Q ss_pred HHHHHHHHHhCCCceEEEEeChhHHH-HHHHHHhCCccccceeee
Q 045774 82 DDLLSFLDALEIDRCAFVGHSVSAMI-GLLAAIHRPNLFSRLILI 125 (275)
Q Consensus 82 ~dl~~~l~~l~~~~~~lvGhS~GG~v-al~~a~~~p~~v~~lvli 125 (275)
+|+...+..+=..+-+|||||+=--+ ||.+ .||.-+...++.
T Consensus 281 ~dvq~~l~~~~~~~TILVGHSLenDL~aLKl--~H~~ViDTa~lf 323 (380)
T KOG2248|consen 281 EDVQKELLELISKNTILVGHSLENDLKALKL--DHPSVIDTAVLF 323 (380)
T ss_pred HHHHHHHHhhcCcCcEEEeechhhHHHHHhh--hCCceeeeeEEE
Confidence 45555555554578999999999666 6665 477665555444
No 345
>PF12641 Flavodoxin_3: Flavodoxin domain
Probab=22.12 E-value=2.8e+02 Score=21.14 Aligned_cols=59 Identities=15% Similarity=0.224 Sum_probs=37.4
Q ss_pred CCcEEEEEeCCCCCCCHHHHHHHHHHcCCCccEEEcCCCCCCCCCCChHHHHHHHHHHHH
Q 045774 213 RVPVCIIQSSVDLSVPPAVAEYMRRHLGGPTVLEFLPTHGHLPHVSSPAPVANAIQQLLR 272 (275)
Q Consensus 213 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 272 (275)
+.-++++..--|.-.+....+.+.+.+.+ .++.++--+|..+--++-+.+.+.+..++.
T Consensus 39 ~yD~i~lG~w~d~G~~d~~~~~fl~~l~~-KkV~lF~T~G~~~~s~~~~~~~~~~~~~~~ 97 (160)
T PF12641_consen 39 DYDLIFLGFWIDKGTPDKDMKEFLKKLKG-KKVALFGTAGAGPDSEYAKKILKNVEALLP 97 (160)
T ss_pred CCCEEEEEcCccCCCCCHHHHHHHHHccC-CeEEEEEecCCCCchHHHHHHHHHHHHhhc
Confidence 45667777777765555544445555665 466677667776666666667666666664
No 346
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=22.01 E-value=81 Score=23.07 Aligned_cols=20 Identities=10% Similarity=0.298 Sum_probs=15.8
Q ss_pred CCCceEEEEcCCCCChhhhh
Q 045774 22 QGQSIIVFSHGFGSDQSVWS 41 (275)
Q Consensus 22 ~g~~~ivllHG~~~~~~~w~ 41 (275)
+.+|.|+-+|||+++...|-
T Consensus 50 p~KpLVlSfHG~tGtGKn~v 69 (127)
T PF06309_consen 50 PRKPLVLSFHGWTGTGKNFV 69 (127)
T ss_pred CCCCEEEEeecCCCCcHHHH
Confidence 34567888999999998874
No 347
>PF08197 TT_ORF2a: pORF2a truncated protein; InterPro: IPR013267 Most isolated ORF2 of TT virus (TTV) encode a 49 amino acid protein (pORF2a) because of an in-frame stop codon. ORF2s isolated from G1 TTV encode a 202 amino acid protein (pORF2ab) [].
Probab=21.88 E-value=58 Score=18.69 Aligned_cols=14 Identities=14% Similarity=-0.038 Sum_probs=11.4
Q ss_pred CCEEEEEccCCCCC
Q 045774 50 AYRVISFDLMCSGS 63 (275)
Q Consensus 50 ~~~via~Dl~G~G~ 63 (275)
+-.|-+-|+||+|.
T Consensus 34 qgairardwpg~gq 47 (49)
T PF08197_consen 34 QGAIRARDWPGYGQ 47 (49)
T ss_pred ccceEeccCCCcCC
Confidence 35688999999996
No 348
>PRK06193 hypothetical protein; Provisional
Probab=21.57 E-value=1.3e+02 Score=23.98 Aligned_cols=28 Identities=18% Similarity=0.088 Sum_probs=22.2
Q ss_pred chhHHHHHHHHHHHHhC--CCceEEEEeCh
Q 045774 76 TLDGYVDDLLSFLDALE--IDRCAFVGHSV 103 (275)
Q Consensus 76 ~~~~~a~dl~~~l~~l~--~~~~~lvGhS~ 103 (275)
+.+.+.+++.++++.+. .+++.+|||..
T Consensus 136 ~~~~y~~~l~~~I~~l~~~~~~vLlVgHnp 165 (206)
T PRK06193 136 RNALLKAGLRPLLTTPPDPGTNTVLVGHDD 165 (206)
T ss_pred hHHHHHHHHHHHHhhCCCCCCeEEEEeCch
Confidence 45667788999998874 45799999994
No 349
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=21.48 E-value=75 Score=24.68 Aligned_cols=32 Identities=13% Similarity=0.300 Sum_probs=21.0
Q ss_pred eEEEEcC---CCCChhhhhhhHHHhhc-CCEEEEEc
Q 045774 26 IIVFSHG---FGSDQSVWSRVIPSFTR-AYRVISFD 57 (275)
Q Consensus 26 ~ivllHG---~~~~~~~w~~~~~~l~~-~~~via~D 57 (275)
.||++|- ...+.+.-..+++.|.+ +|+.++++
T Consensus 153 ~Iil~Hd~~~~~~t~~~l~~~i~~l~~~Gy~~vtl~ 188 (191)
T TIGR02764 153 DIILLHASDSAKQTVKALPTIIKKLKEKGYEFVTIS 188 (191)
T ss_pred CEEEEeCCCCcHhHHHHHHHHHHHHHHCCCEEEEHH
Confidence 4888882 23345566677777754 78888764
No 350
>TIGR02364 dha_pts dihydroxyacetone kinase, phosphotransfer subunit. In E. coli and many other bacteria, unlike the yeasts and a few bacteria such as Citrobacter freundii, the dihydroxyacetone kinase (also called glycerone kinase) transfers a phosphate from a phosphoprotein rather than from ATP and contains multiple subunits. This protein, which resembles proteins of PTS transport systems, is found with its gene adjacent to
Probab=21.10 E-value=3.3e+02 Score=19.72 Aligned_cols=87 Identities=10% Similarity=0.077 Sum_probs=49.0
Q ss_pred eEEEEcCCCCChhhhhhhHHHhhc-CCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhCC-CceEEEEeCh
Q 045774 26 IIVFSHGFGSDQSVWSRVIPSFTR-AYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALEI-DRCAFVGHSV 103 (275)
Q Consensus 26 ~ivllHG~~~~~~~w~~~~~~l~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~-~~~~lvGhS~ 103 (275)
.||..||-- -++-....+..+.. +-++.+...-.- .++....+.+.+.++.+.. +.=++|=-++
T Consensus 3 IvivSHs~~-lA~Gi~~~~~~~~g~~~~i~~~gg~~d-------------~~~gt~~~~I~~ai~~~~~~~dgVlvl~DL 68 (125)
T TIGR02364 3 IVLVSHSKK-IAEGIKELIKQMAGDDVTIISAGGTDD-------------GRLGTSPDKIIEAIEKADNEADGVLIFYDL 68 (125)
T ss_pred EEEEeCCHH-HHHHHHHHHHHHcCCCccEEEEecCCC-------------CCccchHHHHHHHHHHhcCCCCCEEEEEcC
Confidence 577888820 13334455555543 567777743211 1356677778888887743 4545566677
Q ss_pred hHHHHH---HHHHhCCccccceeeec
Q 045774 104 SAMIGL---LAAIHRPNLFSRLILIG 126 (275)
Q Consensus 104 GG~val---~~a~~~p~~v~~lvli~ 126 (275)
||.+.- ..-...++++..+...+
T Consensus 69 Ggs~~n~e~a~~~l~~~~~~~v~g~n 94 (125)
T TIGR02364 69 GSAVMNAEMAVELLEDEDRDKVHLVD 94 (125)
T ss_pred CCcHhHHHHHHHHhccccccEEEEec
Confidence 888831 22223445566555554
No 351
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=21.09 E-value=1.7e+02 Score=24.99 Aligned_cols=34 Identities=18% Similarity=0.166 Sum_probs=26.8
Q ss_pred HHHHHHHHHHhCC----CceEEEEeC--hhHHHHHHHHHh
Q 045774 81 VDDLLSFLDALEI----DRCAFVGHS--VSAMIGLLAAIH 114 (275)
Q Consensus 81 a~dl~~~l~~l~~----~~~~lvGhS--~GG~val~~a~~ 114 (275)
+..+.+++++.++ +++.+||.| ||-.++..+...
T Consensus 143 p~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~ 182 (301)
T PRK14194 143 PSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQA 182 (301)
T ss_pred HHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHC
Confidence 5667888887764 479999997 999999888653
No 352
>PF14252 DUF4347: Domain of unknown function (DUF4347)
Probab=20.94 E-value=3.4e+02 Score=20.83 Aligned_cols=77 Identities=18% Similarity=0.238 Sum_probs=52.2
Q ss_pred EEEEcCCCCChhhhhhhHHHhhcCCEEEEEccCCCCCCCCC--CCCcccccchhHHHHHHHHHHHHhCCC-ceEEEEeCh
Q 045774 27 IVFSHGFGSDQSVWSRVIPSFTRAYRVISFDLMCSGSCDPT--NYDFQRYATLDGYVDDLLSFLDALEID-RCAFVGHSV 103 (275)
Q Consensus 27 ivllHG~~~~~~~w~~~~~~l~~~~~via~Dl~G~G~S~~~--~~~~~~~~~~~~~a~dl~~~l~~l~~~-~~~lvGhS~ 103 (275)
++++..- .+-...+.+.|+..-.+-++.+..||.+... ....-...++..+++.+.++-+.|..+ .+.|.|=..
T Consensus 25 v~~ld~~---~d~~~qI~~~L~~~~~i~~lhivsHG~~G~l~LG~~~l~~~~L~~~~~~l~~w~~~L~~~~~IlLyGC~v 101 (165)
T PF14252_consen 25 VVILDPS---RDGLEQIAQALAGYQNIDALHIVSHGSPGALQLGNTWLSAETLEQYADELAQWGQALADDGDILLYGCNV 101 (165)
T ss_pred EEEEeCC---CchHHHHHHHHhcCCCCceEEEEcCCCcceEEECCceeCHHHHHHHHHHHHHHHHHhCCCCcEEEEcCcc
Confidence 5555542 4446677788887667888999999976421 111222346888999999988888766 788877666
Q ss_pred hHH
Q 045774 104 SAM 106 (275)
Q Consensus 104 GG~ 106 (275)
+.-
T Consensus 102 aag 104 (165)
T PF14252_consen 102 AAG 104 (165)
T ss_pred Ccc
Confidence 554
No 353
>COG0163 UbiX 3-polyprenyl-4-hydroxybenzoate decarboxylase [Coenzyme metabolism]
Probab=20.90 E-value=3.9e+02 Score=21.05 Aligned_cols=64 Identities=11% Similarity=0.124 Sum_probs=40.9
Q ss_pred CCCceEEEEcCCCCChhhhhhhHHHhhcCCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHH-HHHHHhCCCc
Q 045774 22 QGQSIIVFSHGFGSDQSVWSRVIPSFTRAYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLL-SFLDALEIDR 95 (275)
Q Consensus 22 ~g~~~ivllHG~~~~~~~w~~~~~~l~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~-~~l~~l~~~~ 95 (275)
++.+.||+.---+-+.-+-+.+ -.+++.--+|.+-.|++-. ++.|++|+++.+. .++|.+|++.
T Consensus 116 ErR~LVLv~REtPl~~ihLeNM-lkl~~~GaiI~Pp~PaFY~---------~P~sieDlvd~~v~rvLD~lgI~~ 180 (191)
T COG0163 116 ERRPLVLVPRETPLSLIHLENM-LKLAEMGAIIMPPMPAFYH---------KPQSIEDLVDFVVGRVLDLLGIEH 180 (191)
T ss_pred hCCceEEEeccCCccHHHHHHH-HHHHHCCCEecCCChhhhc---------CCCCHHHHHHHHHHHHHHHhCCCC
Confidence 3444444444455555444433 3456667889998888842 1247999998855 5899999875
No 354
>KOG2214 consensus Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=20.86 E-value=53 Score=29.98 Aligned_cols=48 Identities=15% Similarity=0.188 Sum_probs=34.6
Q ss_pred hhHHHHHHHHHHHHhCCCceEEEEeChhHHHHHHHHHhCCccccceee
Q 045774 77 LDGYVDDLLSFLDALEIDRCAFVGHSVSAMIGLLAAIHRPNLFSRLIL 124 (275)
Q Consensus 77 ~~~~a~dl~~~l~~l~~~~~~lvGhS~GG~val~~a~~~p~~v~~lvl 124 (275)
+-.+-=-+...|-..++=+-++-|-|+||.||..++.+.-+..+.+.-
T Consensus 185 FGlfH~GVlrtL~e~dLlP~IIsGsS~GaivAsl~~v~~~eEl~~Ll~ 232 (543)
T KOG2214|consen 185 FGLFHIGVLRTLLEQDLLPNIISGSSAGAIVASLVGVRSNEELKQLLT 232 (543)
T ss_pred hhhhHHHHHHHHHHccccchhhcCCchhHHHHHHHhhcchHHHHHHhc
Confidence 333433344444445666789999999999999999988888887753
No 355
>PRK14457 ribosomal RNA large subunit methyltransferase N; Provisional
Probab=20.79 E-value=5.7e+02 Score=22.31 Aligned_cols=74 Identities=8% Similarity=-0.037 Sum_probs=44.6
Q ss_pred EEEEcCCCCChhhhhhhHHHhhc-CCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhCCCceEEEEeChhH
Q 045774 27 IVFSHGFGSDQSVWSRVIPSFTR-AYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALEIDRCAFVGHSVSA 105 (275)
Q Consensus 27 ivllHG~~~~~~~w~~~~~~l~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~GG 105 (275)
+++|+|+..+.+.-..+++.+.. ..+|=.+.+-..|.+... .. + ++-.+.+.+++...|+. +.|..|+|-
T Consensus 260 y~LIpGvNDs~e~a~~La~~l~~l~~~VnLIPynp~~~~~~~-----~p-s-~e~i~~f~~~L~~~Gi~--vtvR~~~G~ 330 (345)
T PRK14457 260 YILLGGVNDLPEHAEELANLLRGFQSHVNLIPYNPIDEVEFQ-----RP-S-PKRIQAFQRVLEQRGVA--VSVRASRGL 330 (345)
T ss_pred EEEECCcCCCHHHHHHHHHHHhcCCCeEEEecCCCCCCCCCC-----CC-C-HHHHHHHHHHHHHCCCe--EEEeCCCCC
Confidence 78999999999998888877765 223333333223433211 11 1 33444556666665553 568999998
Q ss_pred HHHH
Q 045774 106 MIGL 109 (275)
Q Consensus 106 ~val 109 (275)
-|..
T Consensus 331 di~a 334 (345)
T PRK14457 331 DANA 334 (345)
T ss_pred chhh
Confidence 7753
No 356
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=20.71 E-value=1e+02 Score=27.66 Aligned_cols=65 Identities=8% Similarity=0.049 Sum_probs=37.9
Q ss_pred chHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHHcCCCccEEEcCCCCCCCCCCC-----hHHHHHHHHHHH
Q 045774 204 DLRHVLGLVRVPVCIIQSSVDLSVPPAVAEYMRRHLGGPTVLEFLPTHGHLPHVSS-----PAPVANAIQQLL 271 (275)
Q Consensus 204 d~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~-----p~~~~~~i~~fl 271 (275)
|+...++.-.--+++|.|++|+...... . +-+...+ +.+.+.|+++|...+.. -++....|++|.
T Consensus 342 dI~~Wvr~~~~rmlFVYG~nDPW~A~~f-~-l~~g~~d-s~v~~~PggnHga~I~~L~~~~r~~a~a~l~~Wa 411 (448)
T PF05576_consen 342 DIDRWVRNNGPRMLFVYGENDPWSAEPF-R-LGKGKRD-SYVFTAPGGNHGARIAGLPEAERAEATARLRRWA 411 (448)
T ss_pred HHHHHHHhCCCeEEEEeCCCCCcccCcc-c-cCCCCcc-eEEEEcCCCcccccccCCCHHHHHHHHHHHHHHc
Confidence 3334455556779999999997653322 1 1111223 46777899999866543 233445555553
No 357
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=20.57 E-value=2.1e+02 Score=21.79 Aligned_cols=38 Identities=18% Similarity=0.259 Sum_probs=26.0
Q ss_pred hhHHHHHHHHHHHHhCC----CceEEEEeC--hhHHHHHHHHHh
Q 045774 77 LDGYVDDLLSFLDALEI----DRCAFVGHS--VSAMIGLLAAIH 114 (275)
Q Consensus 77 ~~~~a~dl~~~l~~l~~----~~~~lvGhS--~GG~val~~a~~ 114 (275)
++--++.+.+++++.+. +++.+||.| .|--+++++..+
T Consensus 16 ~PcTp~aii~lL~~~~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~ 59 (160)
T PF02882_consen 16 VPCTPLAIIELLEYYGIDLEGKKVVVVGRSNIVGKPLAMLLLNK 59 (160)
T ss_dssp --HHHHHHHHHHHHTT-STTT-EEEEE-TTTTTHHHHHHHHHHT
T ss_pred cCCCHHHHHHHHHhcCCCCCCCEEEEECCcCCCChHHHHHHHhC
Confidence 45567778888887653 579999999 688888887764
No 358
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=20.42 E-value=1.9e+02 Score=24.23 Aligned_cols=19 Identities=32% Similarity=0.417 Sum_probs=16.3
Q ss_pred EEEEeChhHHHHHHHHHhC
Q 045774 97 AFVGHSVSAMIGLLAAIHR 115 (275)
Q Consensus 97 ~lvGhS~GG~val~~a~~~ 115 (275)
.++|-|.||.+|+.++..+
T Consensus 37 ~i~GTSaGaiia~~la~g~ 55 (288)
T cd07213 37 LFAGTSAGSLIALGLALGY 55 (288)
T ss_pred EEEEeCHHHHHHHHHHcCc
Confidence 6779999999999988654
No 359
>TIGR00246 tRNA_RlmH_YbeA rRNA large subunit m3Psi methyltransferase RlmH. This protein, in the SPOUT methyltransferase family, previously designated YbeA in E. coli, was shown to be responsible for a further modification, a methylation, to a pseudouridine base in ribosomal large subunit RNA.
Probab=20.25 E-value=2.6e+02 Score=21.20 Aligned_cols=54 Identities=13% Similarity=0.110 Sum_probs=33.5
Q ss_pred hHHHhhcCCEEEEEccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhCCCceEEEEeChhHHHHHH
Q 045774 43 VIPSFTRAYRVISFDLMCSGSCDPTNYDFQRYATLDGYVDDLLSFLDALEIDRCAFVGHSVSAMIGLL 110 (275)
Q Consensus 43 ~~~~l~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~GG~val~ 110 (275)
+...+. +-.||++|-+|-=. |-.++|+.+..+.+. +.+=+.+||-+.|=.-...
T Consensus 59 il~~~~-~~~~i~LDe~Gk~~------------sS~~fA~~l~~~~~~-g~~i~FvIGGa~G~~~~v~ 112 (153)
T TIGR00246 59 ILAAIG-KAHVVTLDIPGKPW------------TTPQLADTLEKWKTD-GRDVTLLIGGPEGLSPTCK 112 (153)
T ss_pred HHHhCC-CCeEEEEcCCCCcC------------CHHHHHHHHHHHhcc-CCeEEEEEcCCCcCCHHHH
Confidence 333444 35799999877632 236677777776433 3245788898888655443
Done!