BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045775
(87 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FKI0|FIMB2_ARATH Fimbrin-like protein 2 OS=Arabidopsis thaliana GN=FIM2 PE=2 SV=1
Length = 687
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/84 (54%), Positives = 61/84 (72%), Gaps = 5/84 (5%)
Query: 1 MNATYIISIARKLGCSIFLLPEDITEVNQKMILTLTASIMHWFMKQPVEEKAS----GIS 56
+NATYIIS+ARKLGCSIFLLPEDI EVNQKM+L L ASIM+W ++Q + +++
Sbjct: 578 LNATYIISVARKLGCSIFLLPEDIIEVNQKMMLILAASIMYWSLQQQSDTESTVSEDATD 637
Query: 57 DSENGSQSETISNSTLDDSASDSS 80
D + S + ISN ++ D AS+SS
Sbjct: 638 DGDANSVAGEISNLSI-DGASESS 660
>sp|Q9FJ70|FIMB3_ARATH Putative fimbrin-like protein 3 OS=Arabidopsis thaliana GN=FIM3
PE=3 SV=1
Length = 714
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 36/46 (78%), Positives = 43/46 (93%)
Query: 1 MNATYIISIARKLGCSIFLLPEDITEVNQKMILTLTASIMHWFMKQ 46
+NATYI+S+ARKLGCS+FLLPEDI EVNQKMIL LTASIM+W ++Q
Sbjct: 579 LNATYIVSVARKLGCSVFLLPEDIVEVNQKMILILTASIMYWSLQQ 624
>sp|Q7G188|FIMB1_ARATH Fimbrin-1 OS=Arabidopsis thaliana GN=FIM1 PE=1 SV=2
Length = 687
Score = 78.6 bits (192), Expect = 1e-14, Method: Composition-based stats.
Identities = 35/46 (76%), Positives = 43/46 (93%)
Query: 1 MNATYIISIARKLGCSIFLLPEDITEVNQKMILTLTASIMHWFMKQ 46
+NATYI+S+ARKLGCS+FLLPEDI EVNQKMIL LTASIM+W +++
Sbjct: 578 LNATYIVSVARKLGCSVFLLPEDIVEVNQKMILILTASIMYWSLQR 623
>sp|Q61233|PLSL_MOUSE Plastin-2 OS=Mus musculus GN=Lcp1 PE=1 SV=4
Length = 627
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 33/45 (73%)
Query: 2 NATYIISIARKLGCSIFLLPEDITEVNQKMILTLTASIMHWFMKQ 46
NA Y IS+ARK+G ++ LPED+ EVN KM++T+ A +M MK+
Sbjct: 582 NAKYAISMARKIGARVYALPEDLVEVNPKMVMTVFACLMGKGMKR 626
>sp|Q6P698|PLSL_DANRE Plastin-2 OS=Danio rerio GN=lcp1 PE=2 SV=1
Length = 624
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 32/45 (71%)
Query: 2 NATYIISIARKLGCSIFLLPEDITEVNQKMILTLTASIMHWFMKQ 46
NA Y IS+ARK+G ++ LPED+ EV KM++T+ A +M M++
Sbjct: 579 NAKYAISMARKIGARVYALPEDLVEVKPKMVMTVFACLMARGMRR 623
>sp|Q99K51|PLST_MOUSE Plastin-3 OS=Mus musculus GN=Pls3 PE=1 SV=3
Length = 630
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 32/45 (71%)
Query: 2 NATYIISIARKLGCSIFLLPEDITEVNQKMILTLTASIMHWFMKQ 46
NA Y +S+AR++G ++ LPED+ EV KM++T+ A +M MK+
Sbjct: 585 NAKYAVSMARRIGARVYALPEDLVEVKPKMVMTVFACLMGRGMKR 629
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Query: 3 ATYIISIARKLGCSIFLLPEDITEVNQKMILTLTASIMHWFMKQP 47
A ++ A KLGC F+ P D+ N K+ L A++ F K P
Sbjct: 337 AESMLQQADKLGCRQFVTPADVVSGNPKLNLAFVANL---FNKYP 378
>sp|O88818|PLST_CRIGR Plastin-3 OS=Cricetulus griseus GN=PLS3 PE=2 SV=3
Length = 630
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 32/45 (71%)
Query: 2 NATYIISIARKLGCSIFLLPEDITEVNQKMILTLTASIMHWFMKQ 46
NA Y +S+AR++G ++ LPED+ EV KM++T+ A +M MK+
Sbjct: 585 NAKYAVSMARRIGARVYALPEDLVEVKPKMVMTVFACLMGRGMKR 629
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Query: 3 ATYIISIARKLGCSIFLLPEDITEVNQKMILTLTASIMHWFMKQP 47
A ++ A KLGC F+ P D+ N K+ L A++ F K P
Sbjct: 337 AESMLQQADKLGCRQFVTPADVVSGNPKLNLAFVANL---FNKYP 378
>sp|P13797|PLST_HUMAN Plastin-3 OS=Homo sapiens GN=PLS3 PE=1 SV=4
Length = 630
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 32/45 (71%)
Query: 2 NATYIISIARKLGCSIFLLPEDITEVNQKMILTLTASIMHWFMKQ 46
NA Y +S+AR++G ++ LPED+ EV KM++T+ A +M MK+
Sbjct: 585 NAKYAVSMARRIGARVYALPEDLVEVKPKMVMTVFACLMGRGMKR 629
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Query: 3 ATYIISIARKLGCSIFLLPEDITEVNQKMILTLTASIMHWFMKQP 47
A ++ A KLGC F+ P D+ N K+ L A++ F K P
Sbjct: 337 AESMLQQADKLGCRQFVTPADVVSGNPKLNLAFVANL---FNKYP 378
>sp|A7E3Q8|PLST_BOVIN Plastin-3 OS=Bos taurus GN=PLS3 PE=2 SV=1
Length = 630
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 32/45 (71%)
Query: 2 NATYIISIARKLGCSIFLLPEDITEVNQKMILTLTASIMHWFMKQ 46
NA Y +S+AR++G ++ LPED+ EV KM++T+ A +M MK+
Sbjct: 585 NAKYAVSMARRIGARVYALPEDLVEVKPKMVMTVFACLMGRGMKR 629
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Query: 3 ATYIISIARKLGCSIFLLPEDITEVNQKMILTLTASIMHWFMKQP 47
A ++ A KLGC F+ P D+ N K+ L A++ F K P
Sbjct: 337 AESMLQQADKLGCRQFVTPADVVSGNPKLNLAFVANL---FNKYP 378
>sp|P13796|PLSL_HUMAN Plastin-2 OS=Homo sapiens GN=LCP1 PE=1 SV=6
Length = 627
Score = 50.4 bits (119), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/45 (51%), Positives = 33/45 (73%)
Query: 2 NATYIISIARKLGCSIFLLPEDITEVNQKMILTLTASIMHWFMKQ 46
NA Y IS+ARK+G ++ LPED+ EVN KM++T+ A +M MK+
Sbjct: 582 NAKYAISMARKIGARVYALPEDLVEVNPKMVMTVFACLMGKGMKR 626
>sp|Q63598|PLST_RAT Plastin-3 OS=Rattus norvegicus GN=Pls3 PE=2 SV=2
Length = 630
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 31/44 (70%)
Query: 2 NATYIISIARKLGCSIFLLPEDITEVNQKMILTLTASIMHWFMK 45
NA Y +S+AR++G ++ LPED+ EV KM++T+ A +M MK
Sbjct: 585 NAKYAVSMARRIGARVYALPEDLVEVKPKMVMTVFACLMGRGMK 628
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Query: 3 ATYIISIARKLGCSIFLLPEDITEVNQKMILTLTASIMHWFMKQP 47
A ++ A KLGC F+ P D+ N K+ L A++ F K P
Sbjct: 337 AESMLQQADKLGCRQFVTPADVVSGNPKLNLAFVANL---FNKYP 378
>sp|A6H742|PLSI_BOVIN Plastin-1 OS=Bos taurus GN=PLS1 PE=2 SV=1
Length = 630
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 29/39 (74%)
Query: 2 NATYIISIARKLGCSIFLLPEDITEVNQKMILTLTASIM 40
NA Y IS+ARK+G I+ LP+D+ EV KM++T+ A +M
Sbjct: 584 NAKYAISVARKIGARIYALPDDLVEVKPKMVMTVFACLM 622
Score = 32.3 bits (72), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 23/41 (56%)
Query: 3 ATYIISIARKLGCSIFLLPEDITEVNQKMILTLTASIMHWF 43
A +++ A KLGC F+ P D+ N K+ L A++ + +
Sbjct: 336 AEFMLQEADKLGCRQFVTPADVVSGNPKLNLAFVANLFNTY 376
>sp|Q3V0K9|PLSI_MOUSE Plastin-1 OS=Mus musculus GN=Pls1 PE=2 SV=1
Length = 630
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 29/39 (74%)
Query: 2 NATYIISIARKLGCSIFLLPEDITEVNQKMILTLTASIM 40
NA Y IS+ARK+G I+ LP+D+ EV KM++T+ A +M
Sbjct: 584 NAKYAISVARKIGARIYALPDDLVEVKPKMVMTVFACLM 622
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 23/41 (56%)
Query: 3 ATYIISIARKLGCSIFLLPEDITEVNQKMILTLTASIMHWF 43
A +++ A KLGC F+ P D+ N K+ L A++ + +
Sbjct: 336 AGFMLQEADKLGCRQFVTPADVVSGNPKLNLAFVANLFNTY 376
>sp|Q14651|PLSI_HUMAN Plastin-1 OS=Homo sapiens GN=PLS1 PE=1 SV=2
Length = 629
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 29/39 (74%)
Query: 2 NATYIISIARKLGCSIFLLPEDITEVNQKMILTLTASIM 40
NA Y IS+ARK+G I+ LP+D+ EV KM++T+ A +M
Sbjct: 583 NAKYAISVARKIGARIYALPDDLVEVKPKMVMTVFACLM 621
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 22/41 (53%)
Query: 3 ATYIISIARKLGCSIFLLPEDITEVNQKMILTLTASIMHWF 43
A ++ A KLGC F+ P D+ N K+ L A++ + +
Sbjct: 335 AGLMLQEADKLGCKQFVTPADVVSGNPKLNLAFVANLFNTY 375
>sp|P19179|PLSI_CHICK Plastin-1 OS=Gallus gallus GN=PLS1 PE=1 SV=1
Length = 630
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 29/39 (74%)
Query: 2 NATYIISIARKLGCSIFLLPEDITEVNQKMILTLTASIM 40
NA Y IS+ARK+G I+ LP+D+ EV KM++T+ A +M
Sbjct: 584 NAKYAISVARKIGARIYALPDDLVEVKPKMVMTVFACLM 622
>sp|P54680|FIMB_DICDI Fimbrin OS=Dictyostelium discoideum GN=fimA PE=2 SV=2
Length = 610
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 28/39 (71%)
Query: 1 MNATYIISIARKLGCSIFLLPEDITEVNQKMILTLTASI 39
+NA +S ARK+G +F LPEDI EV KM+LTL AS+
Sbjct: 565 LNAKLAVSTARKVGAVVFALPEDIVEVKPKMVLTLFASL 603
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
Query: 3 ATYIISIARKLGCSIFLLPEDITEVNQKMILTLTASIMHWFMKQPVEEKASGISDSENGS 62
A ++ A KLGC FL P+DI QK+ L A++ F P E + E
Sbjct: 324 AVKVLENADKLGCKKFLKPKDIVTGFQKLNLAFVANL---FNTHPALEPVEDVVIIEETR 380
Query: 63 QSETISN 69
+ +T N
Sbjct: 381 EEKTFRN 387
>sp|O59945|FIMB_SCHPO Fimbrin OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=fim1 PE=1 SV=1
Length = 614
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 26/39 (66%)
Query: 2 NATYIISIARKLGCSIFLLPEDITEVNQKMILTLTASIM 40
NA ISIARKLG IF+LPEDI V +++L S+M
Sbjct: 574 NARLAISIARKLGAVIFILPEDIVAVRPRLVLHFIGSLM 612
>sp|P32599|FIMB_YEAST Fimbrin OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=SAC6 PE=1 SV=1
Length = 642
Score = 47.0 bits (110), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 29/39 (74%)
Query: 2 NATYIISIARKLGCSIFLLPEDITEVNQKMILTLTASIM 40
NA ISIARKLG I+L+PEDI EV ++I+T AS+M
Sbjct: 600 NARLAISIARKLGALIWLVPEDINEVRARLIITFIASLM 638
>sp|P11638|QA1F_NEUCR Quinic acid utilization activator OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=qa-1f PE=4 SV=2
Length = 816
Score = 30.0 bits (66), Expect = 4.3, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 34 TLTASIMHWFMKQPVEEKASGISDSENGSQSETISNSTLDDSASDSSIEEN 84
T TASIM M+QP+ + ++D NG + T NS D+A D+ + N
Sbjct: 659 TATASIMPHVMEQPLSTSINPVNDRFNGIPNPTPYNS---DAALDAITQTN 706
>sp|Q6LPK6|MSBA_PHOPR Lipid A export ATP-binding/permease protein MsbA OS=Photobacterium
profundum GN=msbA PE=3 SV=1
Length = 585
Score = 29.3 bits (64), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 1 MNATYIISIARKLGCSIFLLPEDITEVNQKMILTLTASIMHWFMKQPV---EEKASGISD 57
M Y++ + G S F+ ++ V+ K+++ L + + FMK PV ++++SG
Sbjct: 69 MMPYYLVGLMILRGASGFVSTYCLSWVSGKVVMNLRRGLFNHFMKMPVSFFDKESSGALL 128
Query: 58 SENGSQSETISNSTLDDSASDSSIEENGNI 87
S SE ++++T SA S + E +I
Sbjct: 129 SRITYDSEQVASAT--SSALVSMVREGASI 156
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.309 0.124 0.331
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,257,872
Number of Sequences: 539616
Number of extensions: 874154
Number of successful extensions: 3537
Number of sequences better than 100.0: 30
Number of HSP's better than 100.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 3497
Number of HSP's gapped (non-prelim): 45
length of query: 87
length of database: 191,569,459
effective HSP length: 57
effective length of query: 30
effective length of database: 160,811,347
effective search space: 4824340410
effective search space used: 4824340410
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 55 (25.8 bits)