Query 045778
Match_columns 132
No_of_seqs 140 out of 1041
Neff 7.2
Searched_HMMs 46136
Date Fri Mar 29 05:25:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045778.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/045778hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd01251 PH_centaurin_alpha Cen 99.9 2.2E-25 4.7E-30 151.9 4.2 83 29-115 1-102 (103)
2 cd01264 PH_melted Melted pleck 99.9 2.6E-25 5.6E-30 151.1 4.3 83 28-113 1-101 (101)
3 cd01247 PH_GPBP Goodpasture an 99.9 1.4E-24 2.9E-29 145.1 4.4 81 29-111 1-90 (91)
4 cd01235 PH_SETbf Set binding f 99.9 6E-24 1.3E-28 142.7 4.2 81 29-113 1-101 (101)
5 cd01233 Unc104 Unc-104 pleckst 99.9 3.8E-24 8.3E-29 144.8 3.2 84 27-114 2-99 (100)
6 cd01265 PH_PARIS-1 PARIS-1 ple 99.9 1.3E-23 2.9E-28 141.1 4.0 79 30-112 2-93 (95)
7 cd01236 PH_outspread Outspread 99.9 5.3E-23 1.2E-27 140.6 4.8 80 29-111 1-102 (104)
8 cd01260 PH_CNK Connector enhan 99.9 4.9E-23 1.1E-27 137.7 3.5 81 28-112 1-96 (96)
9 cd01257 PH_IRS Insulin recepto 99.9 8.6E-23 1.9E-27 138.9 3.8 82 26-111 1-100 (101)
10 cd01238 PH_Tec Tec pleckstrin 99.9 1.2E-22 2.6E-27 139.0 4.5 82 28-111 1-105 (106)
11 cd01266 PH_Gab Gab (Grb2-assoc 99.9 2.9E-22 6.3E-27 137.2 3.3 79 29-111 1-106 (108)
12 cd01252 PH_cytohesin Cytohesin 99.8 7.5E-22 1.6E-26 138.2 3.6 84 28-115 1-115 (125)
13 cd01246 PH_oxysterol_bp Oxyste 99.8 2.3E-20 5E-25 122.2 4.0 82 29-112 1-91 (91)
14 cd01245 PH_RasGAP_CG5898 RAS G 99.8 3.7E-20 8E-25 125.3 4.1 77 29-111 1-97 (98)
15 KOG0930 Guanine nucleotide exc 99.8 9.4E-20 2E-24 142.4 4.9 88 24-115 257-377 (395)
16 cd01241 PH_Akt Akt pleckstrin 99.8 2E-19 4.4E-24 122.2 3.0 82 27-112 1-101 (102)
17 cd01244 PH_RasGAP_CG9209 RAS_G 99.8 5E-19 1.1E-23 119.8 4.1 67 40-111 18-97 (98)
18 cd01250 PH_centaurin Centaurin 99.8 4.2E-19 9.2E-24 116.8 3.2 81 29-111 1-93 (94)
19 cd01263 PH_anillin Anillin Ple 99.7 9E-19 1.9E-23 122.8 2.6 84 28-112 2-122 (122)
20 PF00169 PH: PH domain; Inter 99.7 7.2E-18 1.6E-22 110.7 1.5 85 28-113 2-103 (104)
21 cd01219 PH_FGD FGD (faciogenit 99.6 1.4E-16 3.1E-21 107.9 2.9 87 28-114 3-100 (101)
22 PF15409 PH_8: Pleckstrin homo 99.6 4.7E-16 1E-20 103.4 4.2 78 31-112 1-88 (89)
23 PF15413 PH_11: Pleckstrin hom 99.6 5E-16 1.1E-20 107.2 0.9 84 29-112 1-112 (112)
24 cd01254 PH_PLD Phospholipase D 99.6 2.4E-15 5.3E-20 105.1 3.9 67 42-112 32-121 (121)
25 cd01237 Unc112 Unc-112 pleckst 99.5 9.5E-15 2.1E-19 99.8 4.4 75 36-112 13-102 (106)
26 cd01253 PH_beta_spectrin Beta- 99.5 7.6E-15 1.6E-19 99.2 3.8 81 29-111 1-103 (104)
27 smart00233 PH Pleckstrin homol 99.5 6.3E-14 1.4E-18 90.2 4.0 85 28-113 2-101 (102)
28 cd00821 PH Pleckstrin homology 99.4 7.4E-13 1.6E-17 84.5 5.3 83 29-112 1-96 (96)
29 cd01230 PH_EFA6 EFA6 Pleckstri 99.4 6.3E-13 1.4E-17 92.6 4.7 78 40-117 23-115 (117)
30 KOG1090 Predicted dual-specifi 99.3 2.3E-13 4.9E-18 120.1 0.6 85 25-113 1632-1731(1732)
31 cd01220 PH_CDEP Chondrocyte-de 99.3 6.5E-13 1.4E-17 90.0 2.6 84 28-114 3-98 (99)
32 cd01234 PH_CADPS CADPS (Ca2+-d 99.3 8.6E-13 1.9E-17 89.6 2.6 82 28-115 3-112 (117)
33 KOG0690 Serine/threonine prote 99.3 1.7E-12 3.7E-17 104.6 3.0 90 25-114 13-117 (516)
34 cd00900 PH-like Pleckstrin hom 99.2 2.7E-11 5.8E-16 77.7 4.5 79 29-112 1-99 (99)
35 cd01256 PH_dynamin Dynamin ple 99.2 2.8E-11 6.1E-16 81.6 3.4 80 28-112 2-104 (110)
36 PF15410 PH_9: Pleckstrin homo 98.9 3.7E-10 8E-15 78.6 1.9 73 39-112 22-117 (119)
37 PF14593 PH_3: PH domain; PDB: 98.9 2.5E-10 5.4E-15 78.0 0.8 83 26-116 12-102 (104)
38 KOG3640 Actin binding protein 98.9 6E-10 1.3E-14 98.2 1.2 88 27-115 990-1108(1116)
39 cd01218 PH_phafin2 Phafin2 Pl 98.9 3.1E-09 6.8E-14 72.6 4.2 86 28-116 5-101 (104)
40 cd01242 PH_ROK Rok (Rho- assoc 98.8 4.1E-09 8.9E-14 72.4 3.9 85 29-114 2-111 (112)
41 cd01243 PH_MRCK MRCK (myotonic 98.8 6E-09 1.3E-13 72.5 4.3 82 28-111 3-117 (122)
42 cd01259 PH_Apbb1ip Apbb1ip (Am 98.7 2.7E-09 5.8E-14 73.4 0.9 80 29-112 2-107 (114)
43 KOG3723 PH domain protein Melt 98.7 6.2E-09 1.4E-13 88.4 1.1 114 2-119 711-842 (851)
44 KOG0248 Cytoplasmic protein Ma 98.5 8.6E-08 1.9E-12 82.8 4.3 86 28-115 250-343 (936)
45 PTZ00267 NIMA-related protein 98.4 1.5E-07 3.3E-12 78.4 3.6 88 25-113 375-476 (478)
46 KOG2059 Ras GTPase-activating 98.4 7.1E-08 1.5E-12 83.4 1.0 91 25-120 562-671 (800)
47 cd01261 PH_SOS Son of Sevenles 98.4 5E-07 1.1E-11 62.5 4.6 87 28-115 5-111 (112)
48 KOG1739 Serine/threonine prote 98.3 2.3E-07 5E-12 77.6 2.5 82 27-111 24-114 (611)
49 cd01239 PH_PKD Protein kinase 98.3 4.1E-07 9E-12 62.9 3.0 54 28-85 1-54 (117)
50 KOG0521 Putative GTPase activa 98.3 2.4E-07 5.1E-12 82.0 1.7 89 25-118 272-373 (785)
51 cd01249 PH_oligophrenin Oligop 98.2 7.8E-07 1.7E-11 60.7 1.6 82 29-111 1-103 (104)
52 cd01262 PH_PDK1 3-Phosphoinosi 98.1 3.6E-06 7.9E-11 55.8 4.3 78 28-112 2-87 (89)
53 KOG3751 Growth factor receptor 98.1 1E-06 2.2E-11 74.2 2.0 84 25-112 315-423 (622)
54 cd01240 PH_beta-ARK Beta adren 98.1 8.5E-07 1.8E-11 60.8 1.0 85 26-115 2-100 (116)
55 PLN00188 enhanced disease resi 98.1 2.7E-06 5.9E-11 74.2 3.2 89 26-116 3-112 (719)
56 KOG1117 Rho- and Arf-GTPase ac 98.0 3.3E-06 7.1E-11 74.7 3.2 90 23-116 83-180 (1186)
57 cd01258 PH_syntrophin Syntroph 97.9 5.8E-06 1.3E-10 56.8 2.1 82 30-111 2-107 (108)
58 KOG3543 Ca2+-dependent activat 97.6 4.4E-05 9.5E-10 66.2 2.8 89 27-121 464-573 (1218)
59 PF15406 PH_6: Pleckstrin homo 97.5 0.00011 2.3E-09 50.5 3.5 62 47-111 43-111 (112)
60 PTZ00283 serine/threonine prot 97.4 4.1E-05 8.8E-10 64.5 0.8 27 88-114 464-490 (496)
61 KOG1737 Oxysterol-binding prot 97.4 7.6E-05 1.6E-09 66.1 1.8 84 27-112 77-167 (799)
62 PLN02866 phospholipase D 97.4 0.00018 3.8E-09 65.4 4.2 87 25-115 180-309 (1068)
63 cd01224 PH_Collybistin Collybi 97.3 0.00019 4.1E-09 49.4 3.1 82 29-111 4-105 (109)
64 PF15404 PH_4: Pleckstrin homo 97.3 0.00023 5.1E-09 53.2 3.0 33 29-61 1-33 (185)
65 PF12814 Mcp5_PH: Meiotic cell 97.3 0.00034 7.4E-09 48.8 3.7 84 30-113 12-121 (123)
66 cd01222 PH_clg Clg (common-sit 97.2 0.0005 1.1E-08 46.3 3.8 80 28-114 5-96 (97)
67 cd01228 PH_BCR-related BCR (br 97.1 0.0007 1.5E-08 45.4 3.5 82 28-111 4-92 (96)
68 KOG1117 Rho- and Arf-GTPase ac 97.1 0.00071 1.5E-08 60.4 4.3 80 29-112 494-600 (1186)
69 cd01221 PH_ephexin Ephexin Ple 97.1 0.00034 7.4E-09 49.3 1.9 68 43-110 27-119 (125)
70 KOG3531 Rho guanine nucleotide 96.8 0.00029 6.2E-09 62.6 -0.1 86 28-117 925-1023(1036)
71 KOG0248 Cytoplasmic protein Ma 96.7 0.00023 5E-09 62.1 -1.2 83 25-112 257-347 (936)
72 KOG0705 GTPase-activating prot 96.7 0.00055 1.2E-08 58.9 1.1 37 26-62 301-340 (749)
73 KOG0932 Guanine nucleotide exc 96.7 0.00043 9.2E-09 59.4 0.2 88 28-118 507-622 (774)
74 KOG4424 Predicted Rho/Rac guan 96.7 0.00065 1.4E-08 58.2 0.9 92 25-116 270-372 (623)
75 PF15408 PH_7: Pleckstrin homo 96.4 0.00032 6.9E-09 46.5 -1.8 79 30-115 1-99 (104)
76 cd01226 PH_exo84 Exocyst compl 95.9 0.01 2.2E-07 40.3 3.4 66 45-113 21-98 (100)
77 cd01232 PH_TRIO Trio pleckstri 95.8 0.033 7.1E-07 38.6 5.7 26 89-114 88-113 (114)
78 cd01225 PH_Cool_Pix Cool (clon 95.5 0.019 4.2E-07 39.6 3.5 69 43-113 28-109 (111)
79 KOG1738 Membrane-associated gu 95.1 0.0051 1.1E-07 53.3 -0.4 57 20-80 555-614 (638)
80 cd01223 PH_Vav Vav pleckstrin 94.6 0.039 8.5E-07 38.4 3.1 88 27-115 4-113 (116)
81 cd01248 PH_PLC Phospholipase C 94.5 0.056 1.2E-06 36.9 3.6 23 89-111 92-114 (115)
82 KOG4807 F-actin binding protei 93.5 0.00072 1.6E-08 55.9 -8.4 73 40-113 32-114 (593)
83 KOG3551 Syntrophins (type beta 93.4 0.028 6.1E-07 46.6 0.6 85 26-110 291-398 (506)
84 cd01231 PH_Lnk LNK-family Plec 92.7 0.094 2E-06 35.7 2.2 69 41-112 19-107 (107)
85 KOG4047 Docking protein 1 (p62 92.1 0.2 4.3E-06 42.1 3.8 87 25-111 6-115 (429)
86 cd01227 PH_Dbs Dbs (DBL's big 90.5 0.53 1.1E-05 33.5 4.2 30 88-117 90-119 (133)
87 KOG1451 Oligophrenin-1 and rel 90.3 0.26 5.6E-06 43.1 3.0 86 24-112 262-366 (812)
88 KOG3727 Mitogen inducible gene 90.0 0.068 1.5E-06 46.1 -0.7 80 40-123 372-466 (664)
89 PF15405 PH_5: Pleckstrin homo 88.3 0.31 6.8E-06 34.5 1.7 24 88-111 110-133 (135)
90 KOG3523 Putative guanine nucle 87.5 0.36 7.8E-06 42.2 2.0 81 30-110 472-591 (695)
91 KOG4236 Serine/threonine prote 86.5 0.39 8.5E-06 42.0 1.6 85 27-115 413-525 (888)
92 KOG1170 Diacylglycerol kinase 86.4 0.051 1.1E-06 48.8 -3.8 79 28-111 3-92 (1099)
93 cd01255 PH_TIAM TIAM Pleckstri 85.7 1.8 3.9E-05 31.3 4.4 30 88-117 129-158 (160)
94 cd05394 RasGAP_RASA2 RASA2 (or 84.7 0.24 5.2E-06 40.0 -0.5 28 25-52 281-313 (313)
95 cd05134 RasGAP_RASA3 RASA3 (or 84.6 0.29 6.2E-06 39.5 -0.0 26 27-52 280-310 (310)
96 KOG4424 Predicted Rho/Rac guan 84.6 0.69 1.5E-05 40.2 2.2 82 30-115 500-597 (623)
97 cd05128 RasGAP_GAP1_like The G 84.0 0.32 6.8E-06 39.3 -0.1 27 25-51 284-315 (315)
98 KOG1264 Phospholipase C [Lipid 83.1 0.77 1.7E-05 41.8 1.9 48 68-115 850-912 (1267)
99 KOG0592 3-phosphoinositide-dep 80.3 1.9 4.2E-05 37.5 3.3 78 27-112 451-536 (604)
100 KOG3549 Syntrophins (type gamm 78.0 1.6 3.5E-05 36.1 2.1 79 27-115 281-388 (505)
101 KOG2070 Guanine nucleotide exc 74.5 3 6.4E-05 36.0 2.8 66 44-111 326-404 (661)
102 PF04714 BCL_N: BCL7, N-termin 74.0 3.4 7.3E-05 24.6 2.2 22 38-59 25-46 (52)
103 cd05135 RasGAP_RASAL Ras GTPas 71.3 1.3 2.8E-05 36.0 0.0 25 27-51 303-333 (333)
104 KOG0517 Beta-spectrin [Cytoske 68.8 0.41 9E-06 46.6 -3.7 103 11-114 2279-2410(2473)
105 KOG3520 Predicted guanine nucl 64.3 3.8 8.2E-05 38.5 1.5 31 88-118 696-726 (1167)
106 KOG4407 Predicted Rho GTPase-a 59.4 0.99 2.1E-05 42.9 -3.1 93 21-115 917-1043(1973)
107 PF15277 Sec3-PIP2_bind: Exocy 57.1 17 0.00036 23.9 3.3 26 88-113 63-88 (91)
108 KOG3531 Rho guanine nucleotide 56.8 9.6 0.00021 34.9 2.6 85 28-116 751-847 (1036)
109 PF15411 PH_10: Pleckstrin hom 56.0 13 0.00027 25.7 2.6 69 41-109 19-116 (116)
110 KOG4095 Uncharacterized conser 51.3 10 0.00022 27.6 1.6 21 39-59 27-47 (165)
111 PF05117 DUF695: Family of unk 45.5 29 0.00063 23.9 3.2 41 88-132 88-128 (136)
112 KOG1264 Phospholipase C [Lipid 42.8 7.8 0.00017 35.6 -0.1 36 26-61 474-509 (1267)
113 KOG3551 Syntrophins (type beta 38.0 35 0.00076 28.8 3.0 29 88-116 246-274 (506)
114 PF08458 PH_2: Plant pleckstri 36.4 30 0.00065 23.8 2.0 29 88-116 78-106 (110)
115 PF12213 Dpoe2NT: DNA polymera 33.0 11 0.00024 23.9 -0.5 21 96-116 34-54 (73)
116 COG5480 Predicted integral mem 32.9 25 0.00055 25.2 1.2 42 74-115 65-106 (147)
117 cd05395 RasGAP_RASA4 Ras GTPas 30.0 14 0.0003 30.2 -0.6 24 28-51 302-331 (337)
118 PLN02958 diacylglycerol kinase 27.1 47 0.001 28.3 2.1 30 88-117 80-109 (481)
119 PF06282 DUF1036: Protein of u 24.3 40 0.00086 23.1 1.0 47 69-115 29-77 (115)
No 1
>cd01251 PH_centaurin_alpha Centaurin alpha Pleckstrin homology (PH) domain. Centaurin alpha Pleckstrin homology (PH) domain. Centaurin alpha is a phophatidlyinositide binding protein consisting of an N-terminal ArfGAP domain and two PH domains. In response to growth factor activation, PI3K phosphorylates phosphatidylinositol 4,5-bisphosphate to phosphatidylinositol 3,4,5-trisphosphate. Centaurin alpha 1 is recruited to the plasma membrane following growth factor stimulation by specific binding of its PH domain to phosphatidylinositol 3,4,5-trisphosphate. Centaurin alpha 2 is constitutively bound to the plasma membrane since it binds phosphatidylinositol 4,5-bisphosphate and phosphatidylinositol 3,4,5-trisphosphate with equal affinity. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specifici
Probab=99.91 E-value=2.2e-25 Score=151.87 Aligned_cols=83 Identities=17% Similarity=0.259 Sum_probs=69.8
Q ss_pred CCCcchhHhHh-hhhcCCCeeeccccceeeeecccccccCCCCCcceeecceE---EEEe----c--cC---------Cc
Q 045778 29 EIGPANKARRL-HQNLAPPLVHLKQGEHLWFKDSHNITRGSTPRGFIPVGTCL---TVKC----A--ED---------GE 89 (132)
Q Consensus 29 ~~GwL~Kqg~~-~k~WkrRwFvL~~~~L~yyk~~~~~~~~~~~~g~I~L~~~~---~v~~----~--~~---------~~ 89 (132)
++|||.|+|+. .++||+|||||+++.|+||+++. +..|.|.|+|+.+. .|.. . .+ +.
T Consensus 1 KeG~L~K~g~~~~k~wkkRwFvL~~~~L~Yyk~~~----d~~~~G~I~L~~~~~~~~v~~~~~~~~~~~~~~~F~i~t~~ 76 (103)
T cd01251 1 KEGFMEKTGPKHTEGFKKRWFTLDDRRLMYFKDPL----DAFAKGEVFLGSQEDGYEVREGLPPGTQGNHWYGVTLVTPE 76 (103)
T ss_pred CceeEEecCCCCCCCceeEEEEEeCCEEEEECCCC----CcCcCcEEEeeccccceeEeccCCccccccccceEEEEeCC
Confidence 58999999986 69999999999999999999985 46899999998643 1211 0 00 78
Q ss_pred eeEEEeccchhhhccchhhhhhhhhh
Q 045778 90 YTMYSVADTEKEKGERINSIGRAIVQ 115 (132)
Q Consensus 90 r~~~f~A~s~~e~~~Wi~aI~~~i~~ 115 (132)
|+|+|+|+|++|+++||+||+.++..
T Consensus 77 Rty~l~a~s~~e~~~Wi~ai~~v~~~ 102 (103)
T cd01251 77 RKFLFACETEQDRREWIAAFQNVLSR 102 (103)
T ss_pred eEEEEECCCHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999998864
No 2
>cd01264 PH_melted Melted pleckstrin homology (PH) domain. Melted pleckstrin homology (PH) domain. The melted protein has a C-terminal PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.91 E-value=2.6e-25 Score=151.15 Aligned_cols=83 Identities=16% Similarity=0.159 Sum_probs=71.9
Q ss_pred CCCCcchhHhH---hhhhcCCCeeeccccceeeeecccccccCCCCCcceeecceEEEEeccC---------------Cc
Q 045778 28 GEIGPANKARR---LHQNLAPPLVHLKQGEHLWFKDSHNITRGSTPRGFIPVGTCLTVKCAED---------------GE 89 (132)
Q Consensus 28 ~~~GwL~Kqg~---~~k~WkrRwFvL~~~~L~yyk~~~~~~~~~~~~g~I~L~~~~~v~~~~~---------------~~ 89 (132)
+.+|||.|+|+ .+|+|+||||+|+++.|+||++.. ....+.|+|+|+.|.+|+++++ +.
T Consensus 1 ~~~G~l~k~~g~~r~~K~WkrRwF~L~~~~L~y~K~~~---~~~~~~g~IdL~~~~sVk~~~~~~~~~~~~~~Fei~tp~ 77 (101)
T cd01264 1 LIEGQLKEKKGRWRFIKRWKTRYFTLSGAQLLFQKGKS---KDDPDDCSIDLSKIRSVKAVAKKRRDRSLPKAFEIFTAD 77 (101)
T ss_pred CcceEEeecCccceeeecceeEEEEEeCCEEEEEeccC---ccCCCCceEEcccceEEeeccccccccccCcEEEEEcCC
Confidence 35899999988 899999999999999999999884 2234459999999998876542 88
Q ss_pred eeEEEeccchhhhccchhhhhhhh
Q 045778 90 YTMYSVADTEKEKGERINSIGRAI 113 (132)
Q Consensus 90 r~~~f~A~s~~e~~~Wi~aI~~~i 113 (132)
|+|||+|+|++++++||++|+.|+
T Consensus 78 rt~~l~A~se~e~e~WI~~i~~a~ 101 (101)
T cd01264 78 KTYILKAKDEKNAEEWLQCLNIAV 101 (101)
T ss_pred ceEEEEeCCHHHHHHHHHHHHhhC
Confidence 999999999999999999998764
No 3
>cd01247 PH_GPBP Goodpasture antigen binding protein (GPBP) Pleckstrin homology (PH) domain. Goodpasture antigen binding protein (GPBP) Pleckstrin homology (PH) domain. The GPBP protein is a kinase that phosphorylates an N-terminal region of the alpha 3 chain of type IV collagen , which is commonly known as the goodpasture antigen. It has has an N-terminal PH domain and a C-terminal START domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cyt
Probab=99.90 E-value=1.4e-24 Score=145.09 Aligned_cols=81 Identities=17% Similarity=0.191 Sum_probs=68.4
Q ss_pred CCCcchhHhHhhhhcCCCeeeccccceeeeecccccccCCCCCcceeecceEEEEeccC---------CceeEEEeccch
Q 045778 29 EIGPANKARRLHQNLAPPLVHLKQGEHLWFKDSHNITRGSTPRGFIPVGTCLTVKCAED---------GEYTMYSVADTE 99 (132)
Q Consensus 29 ~~GwL~Kqg~~~k~WkrRwFvL~~~~L~yyk~~~~~~~~~~~~g~I~L~~~~~v~~~~~---------~~r~~~f~A~s~ 99 (132)
++|||.|+|+.+|+|++|||||+++.|+||+++.+ ....|+|.|+|..|.++....+ +.++|+|.|+|+
T Consensus 1 ~~G~L~K~~~~~k~Wk~RwFvL~~g~L~Yyk~~~~--~~~~~~G~I~L~~~~i~~~~~~~~~F~i~~~~~r~~~L~A~s~ 78 (91)
T cd01247 1 TNGVLSKWTNYINGWQDRYFVLKEGNLSYYKSEAE--KSHGCRGSIFLKKAIIAAHEFDENRFDISVNENVVWYLRAENS 78 (91)
T ss_pred CceEEEEeccccCCCceEEEEEECCEEEEEecCcc--CcCCCcEEEECcccEEEcCCCCCCEEEEEeCCCeEEEEEeCCH
Confidence 47999999999999999999999999999999852 2246899999999865432222 449999999999
Q ss_pred hhhccchhhhhh
Q 045778 100 KEKGERINSIGR 111 (132)
Q Consensus 100 ~e~~~Wi~aI~~ 111 (132)
+|+++||+||+.
T Consensus 79 ~e~~~Wi~al~~ 90 (91)
T cd01247 79 QSRLLWMDSVVR 90 (91)
T ss_pred HHHHHHHHHHhh
Confidence 999999999975
No 4
>cd01235 PH_SETbf Set binding factor Pleckstrin Homology (PH) domain. Set binding factor Pleckstrin Homology (PH) domain. Set binding factor is a myotubularin-related pseudo-phosphatase consisting of a Denn domain, a Gram domain, an inactive phosphatase domain, a SID motif and a C-terminal PH domain. Its PH domain is predicted to bind lipids based upon its ability to respond to phosphatidylinositol 3-kinase .
Probab=99.89 E-value=6e-24 Score=142.70 Aligned_cols=81 Identities=19% Similarity=0.204 Sum_probs=69.0
Q ss_pred CCCcchhHhHhhhhcCCCeeeccc--cceeeeecccccccCCCCCcceeecceEEEEec-----------cC-------C
Q 045778 29 EIGPANKARRLHQNLAPPLVHLKQ--GEHLWFKDSHNITRGSTPRGFIPVGTCLTVKCA-----------ED-------G 88 (132)
Q Consensus 29 ~~GwL~Kqg~~~k~WkrRwFvL~~--~~L~yyk~~~~~~~~~~~~g~I~L~~~~~v~~~-----------~~-------~ 88 (132)
++|||.|+|+..++|++|||||.+ +.|+||+++. +..|+|.|+|..+..+... +. +
T Consensus 1 ~~G~L~K~g~~~k~WkkRwFvL~~~~~~L~Yy~~~~----~~~~~g~I~L~~~~~v~~~~~~~~~~~~~~~~~~f~i~t~ 76 (101)
T cd01235 1 CEGYLYKRGALLKGWKPRWFVLDPDKHQLRYYDDFE----DTAEKGCIDLAEVKSVNLAQPGMGAPKHTSRKGFFDLKTS 76 (101)
T ss_pred CeEEEEEcCCCCCCccceEEEEECCCCEEEEecCCC----CCccceEEEcceeEEEeecCCCCCCCCCCCCceEEEEEeC
Confidence 589999999999999999999984 4899999884 4789999999987655321 01 7
Q ss_pred ceeEEEeccchhhhccchhhhhhhh
Q 045778 89 EYTMYSVADTEKEKGERINSIGRAI 113 (132)
Q Consensus 89 ~r~~~f~A~s~~e~~~Wi~aI~~~i 113 (132)
.|+|+|+|+|++|+++||.||+.+|
T Consensus 77 ~r~~~~~a~s~~e~~~Wi~ai~~~i 101 (101)
T cd01235 77 KRTYNFLAENINEAQRWKEKIQQCI 101 (101)
T ss_pred CceEEEECCCHHHHHHHHHHHHhhC
Confidence 7899999999999999999998875
No 5
>cd01233 Unc104 Unc-104 pleckstrin homology (PH) domain. Unc-104 pleckstrin homology (PH) domain. Unc-104 is a kinesin-like protein containing an N-terminal kinesin catalytic domain, followed by a forkhead associated domain with a C-terminal PH domain. These proteins are responsible for the transport of membrane vesicles along microtubules. The mechanism involves the binding of the PH domain to phosphatidiylinositol (4,5) P2-containing liposomes.
Probab=99.89 E-value=3.8e-24 Score=144.83 Aligned_cols=84 Identities=12% Similarity=0.099 Sum_probs=71.5
Q ss_pred CCCCCcchhHhHhhhhcCCCeeeccccceeeeecccccccCCCCCcceeecceEEEEec--------c------CCceeE
Q 045778 27 PGEIGPANKARRLHQNLAPPLVHLKQGEHLWFKDSHNITRGSTPRGFIPVGTCLTVKCA--------E------DGEYTM 92 (132)
Q Consensus 27 ~~~~GwL~Kqg~~~k~WkrRwFvL~~~~L~yyk~~~~~~~~~~~~g~I~L~~~~~v~~~--------~------~~~r~~ 92 (132)
+.++|||.|+|+..++|++|||||+++.|+||+++. +..|.|.|+|..+...... + .+.|+|
T Consensus 2 v~k~G~L~Kkg~~~k~WkkRwfvL~~~~L~yyk~~~----~~~~~~~I~L~~~~v~~~~~~~~~~~~~~~F~I~t~~rt~ 77 (100)
T cd01233 2 VSKKGYLNFPEETNSGWTRRFVVVRRPYLHIYRSDK----DPVERGVINLSTARVEHSEDQAAMVKGPNTFAVCTKHRGY 77 (100)
T ss_pred cceeEEEEeeCCCCCCcEEEEEEEECCEEEEEccCC----CccEeeEEEecccEEEEccchhhhcCCCcEEEEECCCCEE
Confidence 357899999999899999999999999999999985 4789999999976432111 1 188999
Q ss_pred EEeccchhhhccchhhhhhhhh
Q 045778 93 YSVADTEKEKGERINSIGRAIV 114 (132)
Q Consensus 93 ~f~A~s~~e~~~Wi~aI~~~i~ 114 (132)
+|+|+|++|+++||.||+..++
T Consensus 78 ~~~A~s~~e~~~Wi~ai~~~~~ 99 (100)
T cd01233 78 LFQALSDKEMIDWLYALNPLYA 99 (100)
T ss_pred EEEcCCHHHHHHHHHHhhhhhc
Confidence 9999999999999999988764
No 6
>cd01265 PH_PARIS-1 PARIS-1 pleckstrin homology (PH) domain. PARIS-1 pleckstrin homology (PH) domain. PARIS-1 contains a PH domain and a TBC-type GTPase catalytic domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.88 E-value=1.3e-23 Score=141.12 Aligned_cols=79 Identities=13% Similarity=0.141 Sum_probs=66.6
Q ss_pred CCcchhHhH--hhhhcCCCeeeccc--cceeeeecccccccCCCCCcceeecceEEEEeccC---------CceeEEEec
Q 045778 30 IGPANKARR--LHQNLAPPLVHLKQ--GEHLWFKDSHNITRGSTPRGFIPVGTCLTVKCAED---------GEYTMYSVA 96 (132)
Q Consensus 30 ~GwL~Kqg~--~~k~WkrRwFvL~~--~~L~yyk~~~~~~~~~~~~g~I~L~~~~~v~~~~~---------~~r~~~f~A 96 (132)
+|||.|+|+ .+|+|++|||||++ +.|+||+++. +..|.|+|+|..+..+....+ +.|+|+|+|
T Consensus 2 ~GyL~K~g~~~~~K~WkkRWFvL~~~~~~L~Yyk~~~----d~~p~G~I~L~~~~~~~~~~~~~~~F~i~t~~r~y~l~A 77 (95)
T cd01265 2 CGYLHKIEGKGPLRGRRSRWFALDDRTCYLYYYKDSQ----DAKPLGRVDLSGAAFTYDPREEKGRFEIHSNNEVIALKA 77 (95)
T ss_pred cccEEEecCCCCCcCceeEEEEEcCCCcEEEEECCCC----cccccceEECCccEEEcCCCCCCCEEEEEcCCcEEEEEC
Confidence 699999986 48999999999985 4699999984 478999999998755432221 889999999
Q ss_pred cchhhhccchhhhhhh
Q 045778 97 DTEKEKGERINSIGRA 112 (132)
Q Consensus 97 ~s~~e~~~Wi~aI~~~ 112 (132)
+|++|+++||+||+.+
T Consensus 78 ~s~~e~~~Wi~al~~~ 93 (95)
T cd01265 78 SSDKQMNYWLQALQSK 93 (95)
T ss_pred CCHHHHHHHHHHHHhh
Confidence 9999999999999875
No 7
>cd01236 PH_outspread Outspread Pleckstrin homology (PH) domain. Outspread Pleckstrin homology (PH) domain. Outspread contains two PH domains and a C-terminal coiled-coil region. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.87 E-value=5.3e-23 Score=140.57 Aligned_cols=80 Identities=20% Similarity=0.139 Sum_probs=65.2
Q ss_pred CCCcchhHhH---------hhhhcCCCeeeccc-cceeeeecccccccCCCCCcceeecceEEEEeccC-----------
Q 045778 29 EIGPANKARR---------LHQNLAPPLVHLKQ-GEHLWFKDSHNITRGSTPRGFIPVGTCLTVKCAED----------- 87 (132)
Q Consensus 29 ~~GwL~Kqg~---------~~k~WkrRwFvL~~-~~L~yyk~~~~~~~~~~~~g~I~L~~~~~v~~~~~----------- 87 (132)
++|||.|.+. ..|+||||||||++ +.|+||++.. .+..|+|+|+|+.|..|..+++
T Consensus 1 ~~g~l~~~~~~~~~~~~~~~~K~WkrRWFvL~~~~~L~y~~d~~---~~~~p~G~IdL~~~~~V~~~~~~~~~~~~f~I~ 77 (104)
T cd01236 1 YCGWLLVAPDGTDFDNPVHRSKRWQRRWFILYDHGLLTYALDEM---PTTLPQGTIDMNQCTDVVDAEARTGQKFSICIL 77 (104)
T ss_pred CcceeEEcCCCCcccccceeeccccceEEEEeCCCEEEEeeCCC---CCcccceEEEccceEEEeecccccCCccEEEEE
Confidence 4799999742 47999999999985 5666766653 3478999999999988765432
Q ss_pred -CceeEEEeccchhhhccchhhhhh
Q 045778 88 -GEYTMYSVADTEKEKGERINSIGR 111 (132)
Q Consensus 88 -~~r~~~f~A~s~~e~~~Wi~aI~~ 111 (132)
+.|+|||.|+|++|+++||++|+.
T Consensus 78 tp~R~f~l~Aete~E~~~Wi~~l~~ 102 (104)
T cd01236 78 TPDKEHFIKAETKEEISWWLNMLMV 102 (104)
T ss_pred CCCceEEEEeCCHHHHHHHHHHHHh
Confidence 889999999999999999999964
No 8
>cd01260 PH_CNK Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain. Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain. CNK is believed to regulate the activity and the subcellular localization of RAS activated RAF. CNK is composed of N-terminal SAM and PDZ domains along with a central or C-terminal PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskelet
Probab=99.87 E-value=4.9e-23 Score=137.73 Aligned_cols=81 Identities=19% Similarity=0.211 Sum_probs=67.1
Q ss_pred CCCCcchhHhH----hhhhcCCCeeeccccceeeeecccccccCCCCCcceeecceEEEEeccC----------Cc-eeE
Q 045778 28 GEIGPANKARR----LHQNLAPPLVHLKQGEHLWFKDSHNITRGSTPRGFIPVGTCLTVKCAED----------GE-YTM 92 (132)
Q Consensus 28 ~~~GwL~Kqg~----~~k~WkrRwFvL~~~~L~yyk~~~~~~~~~~~~g~I~L~~~~~v~~~~~----------~~-r~~ 92 (132)
+++|||.|++. .++.|++|||||+++.|+||+++. +..|.|.|+|+++.+....+. +. ++|
T Consensus 1 ~~~GwL~kk~~~~g~~~k~WkkrwfvL~~~~L~yyk~~~----~~~~~~~I~L~~~~v~~~~~~~k~~~F~I~~~~~~~~ 76 (96)
T cd01260 1 DCDGWLWKRKKPGGFMGQKWARRWFVLKGTTLYWYRSKQ----DEKAEGLIFLSGFTIESAKEVKKKYAFKVCHPVYKSF 76 (96)
T ss_pred CceeEEEEecCCCCccccCceeEEEEEECCEEEEECCCC----CCccceEEEccCCEEEEchhcCCceEEEECCCCCcEE
Confidence 57999999864 456999999999999999999985 478999999998754322111 44 999
Q ss_pred EEeccchhhhccchhhhhhh
Q 045778 93 YSVADTEKEKGERINSIGRA 112 (132)
Q Consensus 93 ~f~A~s~~e~~~Wi~aI~~~ 112 (132)
+|+|+|++|+++||.||+.|
T Consensus 77 ~f~a~s~~e~~~Wi~ai~~~ 96 (96)
T cd01260 77 YFAAETLDDLSQWVNHLITA 96 (96)
T ss_pred EEEeCCHHHHHHHHHHHHhC
Confidence 99999999999999999764
No 9
>cd01257 PH_IRS Insulin receptor substrate (IRS) pleckstrin homology (PH) domain. Insulin receptor substrate (IRS) pleckstrin homology (PH) domain. PH domains are only found in eukaryotes, and are often involved in targeting proteins to the plasma membrane via lipid binding. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes. The IRS PH domain targets IRS molecules to the plasma membrane, usually in response to insulin stimulation.
Probab=99.87 E-value=8.6e-23 Score=138.90 Aligned_cols=82 Identities=16% Similarity=0.344 Sum_probs=69.1
Q ss_pred CCCCCCcchhHhHhhhhcCCCeeecccc------ceeeeecccccc-cCCCCCcceeecceEEEEeccC-----------
Q 045778 26 QPGEIGPANKARRLHQNLAPPLVHLKQG------EHLWFKDSHNIT-RGSTPRGFIPVGTCLTVKCAED----------- 87 (132)
Q Consensus 26 ~~~~~GwL~Kqg~~~k~WkrRwFvL~~~------~L~yyk~~~~~~-~~~~~~g~I~L~~~~~v~~~~~----------- 87 (132)
|++++|||.|| |+||||||||+++ .|.||+++.+.. ....|+|+|+|..|..|...++
T Consensus 1 ~v~k~GyL~K~----K~~kkRwFVLr~~~~~~p~~Leyyk~ek~~~~~~~~p~~vI~L~~c~~v~~~~d~k~~~~f~i~t 76 (101)
T cd01257 1 DVRKSGYLRKQ----KSMHKRFFVLRAESSGGPARLEYYENEKKFLQKGSAPKRVIPLESCFNINKRADAKHRHLIALYT 76 (101)
T ss_pred CccEEEEEeEe----cCcEeEEEEEecCCCCCCceEEEECChhhccccCCCceEEEEccceEEEeeccccccCeEEEEEe
Confidence 56889999998 8999999999988 799999985211 1267999999999988755433
Q ss_pred CceeEEEeccchhhhccchhhhhh
Q 045778 88 GEYTMYSVADTEKEKGERINSIGR 111 (132)
Q Consensus 88 ~~r~~~f~A~s~~e~~~Wi~aI~~ 111 (132)
+.++|+|+|+|++|+++||++|..
T Consensus 77 ~dr~f~l~aese~E~~~Wi~~i~~ 100 (101)
T cd01257 77 RDEYFAVAAENEAEQDSWYQALLE 100 (101)
T ss_pred CCceEEEEeCCHHHHHHHHHHHhh
Confidence 789999999999999999999953
No 10
>cd01238 PH_Tec Tec pleckstrin homology (PH) domain. Tec pleckstrin homology (PH) domain. Proteins in the Tec family of cytoplasmic protein tyrosine kinases that includes Bruton's tyrosine kinase (BTK), BMX, IL2-inducible T-cell kinase (Itk) and Tec. These proteins generally have an N-terminal PH domain, followed by a Tek homology (TH) domain, a SH3 domain, a SH2 domain and a kinase domain. Tec PH domains tether these proteins to membranes following the activation of PI3K and its subsequent phosphorylation of phosphoinositides. The importance of PH domain membrane anchoring is confirmed by the discovery of a mutation of a critical arginine residue in the BTK PH domain, which causes X-linked agammaglobulinemia (XLA) in humans and a related disorder is mice. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few dis
Probab=99.87 E-value=1.2e-22 Score=139.00 Aligned_cols=82 Identities=17% Similarity=0.192 Sum_probs=66.6
Q ss_pred CCCCcchhHhHh-----hhhcCCCeeeccccceeeeecccccccCCCCCcceeecceEEEEeccC---------------
Q 045778 28 GEIGPANKARRL-----HQNLAPPLVHLKQGEHLWFKDSHNITRGSTPRGFIPVGTCLTVKCAED--------------- 87 (132)
Q Consensus 28 ~~~GwL~Kqg~~-----~k~WkrRwFvL~~~~L~yyk~~~~~~~~~~~~g~I~L~~~~~v~~~~~--------------- 87 (132)
+++|||.|++.. .++||+|||||+++.|+||+++.+ ....|+|.|+|..+..+....+
T Consensus 1 ~k~g~l~Kr~~~~~~~~~~nwKkRwFvL~~~~L~Yyk~~~~--~~~~~kG~I~L~~~~~ve~~~~~~~~~~~~~~~~~F~ 78 (106)
T cd01238 1 ILESILVKRSQQKKKTSPLNYKERLFVLTKSKLSYYEGDFE--KRGSKKGSIDLSKIKCVETVKPEKNPPIPERFKYPFQ 78 (106)
T ss_pred CcceeeeeeccCCCCCCCCCceeEEEEEcCCEEEEECCCcc--cccCcceeEECCcceEEEEecCCcCcccccccCccEE
Confidence 479999999743 349999999999999999998841 1257999999998765542111
Q ss_pred ---CceeEEEeccchhhhccchhhhhh
Q 045778 88 ---GEYTMYSVADTEKEKGERINSIGR 111 (132)
Q Consensus 88 ---~~r~~~f~A~s~~e~~~Wi~aI~~ 111 (132)
+.++|||.|+|++|+++||+||+.
T Consensus 79 i~t~~r~~yl~A~s~~er~~WI~ai~~ 105 (106)
T cd01238 79 VVHDEGTLYVFAPTEELRKRWIKALKQ 105 (106)
T ss_pred EEeCCCeEEEEcCCHHHHHHHHHHHHh
Confidence 568999999999999999999975
No 11
>cd01266 PH_Gab Gab (Grb2-associated binder) pleckstrin homology (PH) domain. Gab (Grb2-associated binder) pleckstrin homology (PH) domain. The Gab subfamily includes several Gab proteins, Drosophila DOS and C. elegans SOC-1. They are scaffolding adaptor proteins, which possess N-terminal PH domains and a C-terminus with proline-rich regions and multiple phosphorylation sites. Following activation of growth factor receptors, Gab proteins are tyrosine phosphorylated and activate PI3K, which generates 3-phosphoinositide lipids. By binding to these lipids via the PH domain, Gab proteins remain in proximity to the receptor, leading to further signaling. While not all Gab proteins depend on the PH domain for recruitment, it is required for Gab activity. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display str
Probab=99.85 E-value=2.9e-22 Score=137.24 Aligned_cols=79 Identities=20% Similarity=0.185 Sum_probs=66.2
Q ss_pred CCCcchhHhHh----hhhcCCCeeeccccc-------eeeeecccccccCCCCCcceeecceEEEEec----c-------
Q 045778 29 EIGPANKARRL----HQNLAPPLVHLKQGE-------HLWFKDSHNITRGSTPRGFIPVGTCLTVKCA----E------- 86 (132)
Q Consensus 29 ~~GwL~Kqg~~----~k~WkrRwFvL~~~~-------L~yyk~~~~~~~~~~~~g~I~L~~~~~v~~~----~------- 86 (132)
.+|||.|+|.. .++||+|||||+++. |+||+++. +..|.|+|+|+.|..+... .
T Consensus 1 ~eGwL~K~~~~~~~~~~~WkrRwFvL~~~~l~~~~~~L~Yyk~~~----~~k~~g~I~L~~~~~v~~~~~~~~~~~~~~~ 76 (108)
T cd01266 1 LEGWLKKSPPYKLLFRTKWVRRYFVLHCGDRERNLFALEYYKTSR----KFKLEFVIDLESCSQVDPGLLCTAGNCIFGY 76 (108)
T ss_pred CceeeeeCCccccccccCcEEEEEEEeccccCCCcceEEEECCCC----CCccceEEECCccEEEcccccccccCcccce
Confidence 48999999873 459999999999876 59999884 4789999999998765321 0
Q ss_pred -----CCceeEEEeccchhhhccchhhhhh
Q 045778 87 -----DGEYTMYSVADTEKEKGERINSIGR 111 (132)
Q Consensus 87 -----~~~r~~~f~A~s~~e~~~Wi~aI~~ 111 (132)
.+.|+|+|+|+|++|+++||++|++
T Consensus 77 ~f~i~t~~r~y~l~A~s~ee~~~Wi~~I~~ 106 (108)
T cd01266 77 GFDIETIVRDLYLVAKNEEEMTLWVNCICK 106 (108)
T ss_pred EEEEEeCCccEEEEECCHHHHHHHHHHHHh
Confidence 0779999999999999999999965
No 12
>cd01252 PH_cytohesin Cytohesin Pleckstrin homology (PH) domain. Cytohesin Pleckstrin homology (PH) domain. Cytohesin is an ARF-Guanine nucleotide Exchange Factor (GEF), which has a Sec7-type Arf-GEFdomain and a pleckstrin homology domain. It specifically binds phosphatidylinositol-3,4,5-trisphosphate (PtdIns(3,4, 5)P3) via its PH domain and it acts as a PI 3-kinase effector mediating biological responses such as cell adhesion and membrane trafficking. PH domains are only found in eukaryotes. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.84 E-value=7.5e-22 Score=138.22 Aligned_cols=84 Identities=19% Similarity=0.197 Sum_probs=70.1
Q ss_pred CCCCcchhHhHhhhhcCCCeeeccccceeeeecccccccCCCCCcceeecceEEEEeccC-----------C--------
Q 045778 28 GEIGPANKARRLHQNLAPPLVHLKQGEHLWFKDSHNITRGSTPRGFIPVGTCLTVKCAED-----------G-------- 88 (132)
Q Consensus 28 ~~~GwL~Kqg~~~k~WkrRwFvL~~~~L~yyk~~~~~~~~~~~~g~I~L~~~~~v~~~~~-----------~-------- 88 (132)
+++|||.|+|+.++.|++|||||.++.|+||+++. +..|.|.|+|+++.+...... .
T Consensus 1 ~k~G~L~K~~~~~~~WkkRwfvL~~~~L~yyk~~~----~~~~~g~I~L~~~~v~~~~~~~~~~~F~i~~~~~~~~i~~~ 76 (125)
T cd01252 1 DREGWLLKQGGRVKTWKRRWFILTDNCLYYFEYTT----DKEPRGIIPLENVSIREVEDPSKPFCFELFSPSDKQQIKAC 76 (125)
T ss_pred CcEEEEEEeCCCCCCeEeEEEEEECCEEEEEcCCC----CCCceEEEECCCcEEEEcccCCCCeeEEEECCccccccccc
Confidence 47899999999899999999999999999999884 468999999998653322110 1
Q ss_pred ------------ceeEEEeccchhhhccchhhhhhhhhh
Q 045778 89 ------------EYTMYSVADTEKEKGERINSIGRAIVQ 115 (132)
Q Consensus 89 ------------~r~~~f~A~s~~e~~~Wi~aI~~~i~~ 115 (132)
.++|+|+|+|++|+++||+||+.++..
T Consensus 77 ~~~~~~~~~~~~~~~~~~~A~s~~e~~~Wi~al~~~~~~ 115 (125)
T cd01252 77 KTESDGRVVEGNHSVYRISAANDEEMDEWIKSIKASISP 115 (125)
T ss_pred cccccccccccCceEEEEECCCHHHHHHHHHHHHHHHhc
Confidence 268889999999999999999998764
No 13
>cd01246 PH_oxysterol_bp Oxysterol binding protein (OSBP) Pleckstrin homology (PH) domain. Oxysterol binding protein (OSBP) Pleckstrin homology (PH) domain. Oxysterol binding proteins are a multigene family that is conserved in yeast, flies, worms, mammals and plants. They all contain a C-terminal oxysterol binding domain, and most contain an N-terminal PH domain. OSBP PH domains bind to membrane phosphoinositides and thus likely play an important role in intracellular targeting. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.80 E-value=2.3e-20 Score=122.20 Aligned_cols=82 Identities=20% Similarity=0.239 Sum_probs=67.6
Q ss_pred CCCcchhHhHhhhhcCCCeeeccccceeeeecccccccCCCCCcceeecceEEEEeccC---------CceeEEEeccch
Q 045778 29 EIGPANKARRLHQNLAPPLVHLKQGEHLWFKDSHNITRGSTPRGFIPVGTCLTVKCAED---------GEYTMYSVADTE 99 (132)
Q Consensus 29 ~~GwL~Kqg~~~k~WkrRwFvL~~~~L~yyk~~~~~~~~~~~~g~I~L~~~~~v~~~~~---------~~r~~~f~A~s~ 99 (132)
++|||.|+++..+.|++|||+|+++.|+||+++.+ ....|.|.|+|+.|........ ..++|+|+|+|+
T Consensus 1 ~~G~L~k~~~~~~~W~~r~~vl~~~~L~~~~~~~~--~~~~~~~~i~l~~~~~~~~~~~~~~F~i~~~~~~~~~~~a~s~ 78 (91)
T cd01246 1 VEGWLLKWTNYLKGWQKRWFVLDNGLLSYYKNKSS--MRGKPRGTILLSGAVISEDDSDDKCFTIDTGGDKTLHLRANSE 78 (91)
T ss_pred CeEEEEEecccCCCceeeEEEEECCEEEEEecCcc--CCCCceEEEEeceEEEEECCCCCcEEEEEcCCCCEEEEECCCH
Confidence 58999999988899999999999999999999851 1127999999998754322221 348999999999
Q ss_pred hhhccchhhhhhh
Q 045778 100 KEKGERINSIGRA 112 (132)
Q Consensus 100 ~e~~~Wi~aI~~~ 112 (132)
+|+++||.||+.|
T Consensus 79 ~e~~~Wi~al~~a 91 (91)
T cd01246 79 EERQRWVDALELA 91 (91)
T ss_pred HHHHHHHHHHHhC
Confidence 9999999999764
No 14
>cd01245 PH_RasGAP_CG5898 RAS GTPase-activating protein (GAP) CG5898 Pleckstrin homology (PH) domain. RAS GTPase-activating protein (GAP) CG5898 Pleckstrin homology (PH) domain. This protein has a domain architecture of SH2-SH3-SH2-PH-C2-Ras_GAP. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.80 E-value=3.7e-20 Score=125.29 Aligned_cols=77 Identities=16% Similarity=0.193 Sum_probs=64.9
Q ss_pred CCCcchhHhHh-hhhcCCCeeeccc----cceeeeecccccccCCCCCcceeecceEEEEeccC-------------Cc-
Q 045778 29 EIGPANKARRL-HQNLAPPLVHLKQ----GEHLWFKDSHNITRGSTPRGFIPVGTCLTVKCAED-------------GE- 89 (132)
Q Consensus 29 ~~GwL~Kqg~~-~k~WkrRwFvL~~----~~L~yyk~~~~~~~~~~~~g~I~L~~~~~v~~~~~-------------~~- 89 (132)
+.|||.|+|+. .|+||+|||+|.+ ++|+||++.. +..|.|.|+|..+ .|....+ +.
T Consensus 1 ~~G~l~K~g~~~~K~wK~rwF~l~~~~s~~~l~yf~~~~----~~~p~gli~l~~~-~V~~v~ds~~~r~~cFel~~~~~ 75 (98)
T cd01245 1 KKGNLLKRTKSVTKLWKTLYFALILDGSRSHESLLSSPK----KTKPIGLIDLSDA-YLYPVHDSLFGRPNCFQIVERAL 75 (98)
T ss_pred CCCccccCCCCcccccceeEEEEecCCCCceEEEEcCCC----CCCccceeecccc-EEEEccccccCCCeEEEEecCCC
Confidence 46999999987 8999999999987 8999999985 4789999999988 4444322 33
Q ss_pred -eeEEEeccchhhhccchhhhhh
Q 045778 90 -YTMYSVADTEKEKGERINSIGR 111 (132)
Q Consensus 90 -r~~~f~A~s~~e~~~Wi~aI~~ 111 (132)
.+|+++|++ +|+++||++|++
T Consensus 76 ~~~y~~~a~~-~er~~Wi~~l~~ 97 (98)
T cd01245 76 PTVYYSCRSS-EERDKWIESLQA 97 (98)
T ss_pred CeEEEEeCCH-HHHHHHHHHHhc
Confidence 589999999 999999999975
No 15
>KOG0930 consensus Guanine nucleotide exchange factor Cytohesin, contains PH and Sec7 domains [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.79 E-value=9.4e-20 Score=142.38 Aligned_cols=88 Identities=24% Similarity=0.244 Sum_probs=72.8
Q ss_pred ecCCCCCCcchhHhH-hhhhcCCCeeeccccceeeeecccccccCCCCCcceeecceEEE--------------------
Q 045778 24 WSQPGEIGPANKARR-LHQNLAPPLVHLKQGEHLWFKDSHNITRGSTPRGFIPVGTCLTV-------------------- 82 (132)
Q Consensus 24 ~~~~~~~GwL~Kqg~-~~k~WkrRwFvL~~~~L~yyk~~~~~~~~~~~~g~I~L~~~~~v-------------------- 82 (132)
+-+|+++|||.|+|+ ..++||||||+|.+++||||.-.+ +..|+|.|+|....+-
T Consensus 257 ffnpdREGWLlKlgg~rvktWKrRWFiLtdNCLYYFe~tT----DKEPrGIIpLeNlsir~VedP~kP~cfEly~ps~~g 332 (395)
T KOG0930|consen 257 FFNPDREGWLLKLGGNRVKTWKRRWFILTDNCLYYFEYTT----DKEPRGIIPLENLSIREVEDPKKPNCFELYIPSNKG 332 (395)
T ss_pred ccCccccceeeeecCCcccchhheeEEeecceeeeeeecc----CCCCCcceeccccceeeccCCCCCCeEEEecCCCCc
Confidence 578999999999986 889999999999999999998775 4789999999864221
Q ss_pred ---EeccC---------CceeEEEeccchhhhccchhhhhhhhhh
Q 045778 83 ---KCAED---------GEYTMYSVADTEKEKGERINSIGRAIVQ 115 (132)
Q Consensus 83 ---~~~~~---------~~r~~~f~A~s~~e~~~Wi~aI~~~i~~ 115 (132)
+.|.. .+..|-++|.|.+|+++||++|+++|.+
T Consensus 333 q~IKACKTe~DGRvVEG~H~vYrIsA~~~Ee~~~Wi~sI~a~is~ 377 (395)
T KOG0930|consen 333 QVIKACKTEADGRVVEGNHSVYRISAPTPEEKDEWIKSIKAAISR 377 (395)
T ss_pred CeeeeecccCCceeEeccceEEEeeCCCHHHHHHHHHHHHHHhcc
Confidence 11111 5568899999999999999999998873
No 16
>cd01241 PH_Akt Akt pleckstrin homology (PH) domain. Akt pleckstrin homology (PH) domain. Akt (Protein Kinase B (PKB)) is a phosphatidylinositol 3'-kinase (PI3K)-dependent Ser/Thr kinase. The PH domain recruits Akt to the plasma membrane by binding to phosphoinositides (PtdIns-3,4-P2) and is required for activation. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.76 E-value=2e-19 Score=122.17 Aligned_cols=82 Identities=16% Similarity=0.173 Sum_probs=57.5
Q ss_pred CCCCCcchhHhHhhhhcCCCeeecc-ccceeeeecccccccCCCCCcceeecce-----EEEEeccC----------C-c
Q 045778 27 PGEIGPANKARRLHQNLAPPLVHLK-QGEHLWFKDSHNITRGSTPRGFIPVGTC-----LTVKCAED----------G-E 89 (132)
Q Consensus 27 ~~~~GwL~Kqg~~~k~WkrRwFvL~-~~~L~yyk~~~~~~~~~~~~g~I~L~~~-----~~v~~~~~----------~-~ 89 (132)
++++|||.|+|+..++|++|||+|+ ++.|+||++... ..+.|.|+|... ..+..... + .
T Consensus 1 v~k~G~L~K~g~~~~~Wk~R~f~L~~~~~l~~yk~~~~----~~~~~~i~l~~~~v~~~~~~~~~~~~~~~F~i~~~~~~ 76 (102)
T cd01241 1 VVKEGWLHKRGEYIKTWRPRYFLLKSDGSFIGYKEKPE----DGDPFLPPLNNFSVAECQLMKTERPRPNTFIIRCLQWT 76 (102)
T ss_pred CcEEEEEEeecCCCCCCeeEEEEEeCCCeEEEEecCCC----ccCccccccCCeEEeeeeeeeccCCCcceEEEEeccCC
Confidence 3689999999999999999999999 778998887631 223455555543 22111100 1 1
Q ss_pred eeE--EEeccchhhhccchhhhhhh
Q 045778 90 YTM--YSVADTEKEKGERINSIGRA 112 (132)
Q Consensus 90 r~~--~f~A~s~~e~~~Wi~aI~~~ 112 (132)
.+. +|+|+|++|+++||+||+.+
T Consensus 77 ~~~~r~f~a~s~ee~~eWi~ai~~v 101 (102)
T cd01241 77 TVIERTFHVESPEEREEWIHAIQTV 101 (102)
T ss_pred cccCEEEEeCCHHHHHHHHHHHHhh
Confidence 111 55799999999999999765
No 17
>cd01244 PH_RasGAP_CG9209 RAS_GTPase activating protein (GAP)_CG9209 pleckstrin homology (PH) domain. RAS_GTPase activating protein (GAP)_CG9209 pleckstrin homology (PH) domain. This protein consists of two C2 domains, followed by a RasGAP domain, a PH domain and a BTK domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.76 E-value=5e-19 Score=119.77 Aligned_cols=67 Identities=15% Similarity=0.196 Sum_probs=57.9
Q ss_pred hhhcCCCeeeccccceeeeecccccccCCCCCcceeecceEEEEeccC-------------CceeEEEeccchhhhccch
Q 045778 40 HQNLAPPLVHLKQGEHLWFKDSHNITRGSTPRGFIPVGTCLTVKCAED-------------GEYTMYSVADTEKEKGERI 106 (132)
Q Consensus 40 ~k~WkrRwFvL~~~~L~yyk~~~~~~~~~~~~g~I~L~~~~~v~~~~~-------------~~r~~~f~A~s~~e~~~Wi 106 (132)
.++||+|||+|+++.|+||+++. ..|.|.|+|+.+..|....+ +.++|||+|+|+.|+++||
T Consensus 18 ~~n~KkRwF~Lt~~~L~Y~k~~~-----~~~~g~I~L~~i~~ve~v~~~~~~~~~~fqivt~~r~~yi~a~s~~E~~~Wi 92 (98)
T cd01244 18 VLHFKKRYFQLTTTHLSWAKDVQ-----CKKSALIKLAAIKGTEPLSDKSFVNVDIITIVCEDDTMQLQFEAPVEATDWL 92 (98)
T ss_pred CcCCceeEEEECCCEEEEECCCC-----CceeeeEEccceEEEEEcCCcccCCCceEEEEeCCCeEEEECCCHHHHHHHH
Confidence 48999999999999999999884 68999999998765543322 7789999999999999999
Q ss_pred hhhhh
Q 045778 107 NSIGR 111 (132)
Q Consensus 107 ~aI~~ 111 (132)
.||+.
T Consensus 93 ~al~k 97 (98)
T cd01244 93 NALEK 97 (98)
T ss_pred HHHhc
Confidence 99975
No 18
>cd01250 PH_centaurin Centaurin Pleckstrin homology (PH) domain. Centaurin Pleckstrin homology (PH) domain. Centaurin beta and gamma consist of a PH domain, an ArfGAP domain and three ankyrin repeats. Centaurain gamma also has an N-terminal Ras homology domain. Centaurin alpha has a different domain architecture and its PH domain is in a different subfamily. Centaurin can bind to phosphatidlyinositol (3,4,5)P3. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.75 E-value=4.2e-19 Score=116.79 Aligned_cols=81 Identities=17% Similarity=0.166 Sum_probs=65.1
Q ss_pred CCCcchhHhHh-hhhcCCCeeeccccceeeeecccccccCCCCCcceeecceEEEEe--cc-C--------CceeEEEec
Q 045778 29 EIGPANKARRL-HQNLAPPLVHLKQGEHLWFKDSHNITRGSTPRGFIPVGTCLTVKC--AE-D--------GEYTMYSVA 96 (132)
Q Consensus 29 ~~GwL~Kqg~~-~k~WkrRwFvL~~~~L~yyk~~~~~~~~~~~~g~I~L~~~~~v~~--~~-~--------~~r~~~f~A 96 (132)
++|||.|++.. .+.|++|||+|.++.|+||+++.+ ....+.+.|+|..|.+... .. . +.++|+|+|
T Consensus 1 k~G~L~kk~~~~~~~W~kr~~~L~~~~l~~y~~~~~--~~~~~~~~i~l~~~~v~~~~~~~~~~~~f~i~~~~~~~~f~a 78 (94)
T cd01250 1 KQGYLYKRSSKSNKEWKKRWFVLKNGQLTYHHRLKD--YDNAHVKEIDLRRCTVRHNGKQPDRRFCFEVISPTKTWHFQA 78 (94)
T ss_pred CcceEEEECCCcCCCceEEEEEEeCCeEEEEcCCcc--cccccceEEeccceEEecCccccCCceEEEEEcCCcEEEEEC
Confidence 58999999854 799999999999999999998852 1256789999987643211 11 1 668999999
Q ss_pred cchhhhccchhhhhh
Q 045778 97 DTEKEKGERINSIGR 111 (132)
Q Consensus 97 ~s~~e~~~Wi~aI~~ 111 (132)
+|++++++||.||+.
T Consensus 79 ~s~~~~~~Wi~al~~ 93 (94)
T cd01250 79 DSEEERDDWISAIQE 93 (94)
T ss_pred CCHHHHHHHHHHHhc
Confidence 999999999999975
No 19
>cd01263 PH_anillin Anillin Pleckstrin homology (PH) domain. Anillin Pleckstrin homology (PH) domain. Anillin is an actin binding protein involved in cytokinesis. It has a C-terminal PH domain, which has been shown to be necessary, but not sufficient for targetting of anillin to ectopic septin containing foci . PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.73 E-value=9e-19 Score=122.75 Aligned_cols=84 Identities=20% Similarity=0.251 Sum_probs=64.3
Q ss_pred CCCCcchh-H-hHhhhhcCCCeeeccccceeeeecccccccCCCCCcceeecceEEEEec--c-C--------------C
Q 045778 28 GEIGPANK-A-RRLHQNLAPPLVHLKQGEHLWFKDSHNITRGSTPRGFIPVGTCLTVKCA--E-D--------------G 88 (132)
Q Consensus 28 ~~~GwL~K-q-g~~~k~WkrRwFvL~~~~L~yyk~~~~~~~~~~~~g~I~L~~~~~v~~~--~-~--------------~ 88 (132)
...|||.- + .+.+|+|+||||||+|+.|+||+.+.+ .....|.|.|+|..|.+.... + + +
T Consensus 2 ~~~GfL~~~q~~~~~k~W~RRWFvL~g~~L~y~k~p~d-~~~~~Plg~I~L~~c~~~~v~~~~r~~c~Rp~tF~i~~~~~ 80 (122)
T cd01263 2 EYHGFLTMFEDTSGFGAWHRRWCALEGGEIKYWKYPDD-EKRKGPTGLIDLSTCTSSEGASAVRDICARPNTFHLDVWRP 80 (122)
T ss_pred ccceeEEEEeccCCCCCceEEEEEEeCCEEEEEcCCCc-cccCCceEEEEhhhCcccccccCChhhcCCCCeEEEEEecc
Confidence 35789884 4 357899999999999999999998864 234689999999998654321 1 0 1
Q ss_pred -----------------cee-EEEeccchhhhccchhhhhhh
Q 045778 89 -----------------EYT-MYSVADTEKEKGERINSIGRA 112 (132)
Q Consensus 89 -----------------~r~-~~f~A~s~~e~~~Wi~aI~~~ 112 (132)
.++ ++|+|||.+|+++||.||+.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~r~~~~lsaDt~eer~~W~~ain~~ 122 (122)
T cd01263 81 KMETDDETLVSQCRRGIERLRVMLSADTKEERQTWLSLLNST 122 (122)
T ss_pred cccccccceeeccCCceeEEEEEEecCCHHHHHHHHHHHhcC
Confidence 122 578999999999999999864
No 20
>PF00169 PH: PH domain; InterPro: IPR001849 The pleckstrin homology (PH) domain is a domain of about 100 residues that occurs in a wide range of proteins involved in intracellular signalling or as constituents of the cytoskeleton [, , , , , , ]. The pleckstrin homology domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids. The 3D structure of several PH domains has been determined []. All known cases have a common structure consisting of two perpendicular anti-parallel beta sheets, followed by a C-terminal amphipathic helix. The loops connecting the beta-strands differ greatly in length, making the PH domain relatively difficult to detect. There are no totally invariant residues within the PH domain. Proteins reported to contain one more PH domains belong to the following families: Pleckstrin, the protein where this domain was first detected, is the major substrate of protein kinase C in platelets. Pleckstrin is one of the rare proteins to contains two PH domains. Ser/Thr protein kinases such as the Akt/Rac family, the beta-adrenergic receptor kinases, the mu isoform of PKC and the trypanosomal NrkA family. Tyrosine protein kinases belonging to the Btk/Itk/Tec subfamily. Insulin Receptor Substrate 1 (IRS-1). Regulators of small G-proteins like guanine nucleotide releasing factor GNRP (Ras-GRF) (which contains 2 PH domains), guanine nucleotide exchange proteins like vav, dbl, SoS and Saccharomyces cerevisiae CDC24, GTPase activating proteins like rasGAP and BEM2/IPL2, and the human break point cluster protein bcr. Cytoskeletal proteins such as dynamin (see IPR001401 from INTERPRO), Caenorhabditis elegans kinesin-like protein unc-104 (see IPR001752 from INTERPRO), spectrin beta-chain, syntrophin (2 PH domains) and S. cerevisiae nuclear migration protein NUM1. Mammalian phosphatidylinositol-specific phospholipase C (PI-PLC) (see IPR000909 from INTERPRO) isoforms gamma and delta. Isoform gamma contains two PH domains, the second one is split into two parts separated by about 400 residues. Oxysterol binding proteins OSBP, S. cerevisiae OSH1 and YHR073w. Mouse protein citron, a putative rho/rac effector that binds to the GTP-bound forms of rho and rac. Several S. cerevisiae proteins involved in cell cycle regulation and bud formation like BEM2, BEM3, BUD4 and the BEM1-binding proteins BOI2 (BEB1) and BOI1 (BOB1). C. elegans protein MIG-10. C. elegans hypothetical proteins C04D8.1, K06H7.4 and ZK632.12. S. cerevisiae hypothetical proteins YBR129c and YHR155w. ; GO: 0005515 protein binding; PDB: 1DYN_B 2DYN_B 3SNH_A 3ZYS_C 1X05_A 2I5F_A 1ZM0_B 1XX0_A 2I5C_C 3A8P_D ....
Probab=99.68 E-value=7.2e-18 Score=110.71 Aligned_cols=85 Identities=22% Similarity=0.311 Sum_probs=70.5
Q ss_pred CCCCcchhHhHhhhhcCCCeeeccccceeeeecccccccCCCCCcceeecceEEEEecc-------C----------Cce
Q 045778 28 GEIGPANKARRLHQNLAPPLVHLKQGEHLWFKDSHNITRGSTPRGFIPVGTCLTVKCAE-------D----------GEY 90 (132)
Q Consensus 28 ~~~GwL~Kqg~~~k~WkrRwFvL~~~~L~yyk~~~~~~~~~~~~g~I~L~~~~~v~~~~-------~----------~~r 90 (132)
.++|||.|++...+.|++|||+|.++.|+||+++.. .....|.+.|+|.++.+..... . ..+
T Consensus 2 ~~~G~L~~~~~~~~~wk~r~~vL~~~~L~~~~~~~~-~~~~~~~~~i~l~~~~v~~~~~~~~~~~~~~~~~f~i~~~~~~ 80 (104)
T PF00169_consen 2 IKEGWLLKKSSSRKKWKKRYFVLRDSYLLYYKSSKD-KSDSKPKGSIPLDDCTVRPDPSSDFLSNKKRKNCFEITTPNGK 80 (104)
T ss_dssp EEEEEEEEEESSSSSEEEEEEEEETTEEEEESSTTT-TTESSESEEEEGTTEEEEEETSSTSTSTSSSSSEEEEEETTSE
T ss_pred EEEEEEEEECCCCCCeEEEEEEEECCEEEEEecCcc-ccceeeeEEEEecCceEEEcCccccccccCCCcEEEEEeCCCc
Confidence 478999999988899999999999999999999852 1247899999999985433211 1 446
Q ss_pred eEEEeccchhhhccchhhhhhhh
Q 045778 91 TMYSVADTEKEKGERINSIGRAI 113 (132)
Q Consensus 91 ~~~f~A~s~~e~~~Wi~aI~~~i 113 (132)
+|+|+|+|+++++.|+.+|+.++
T Consensus 81 ~~~~~~~s~~~~~~W~~~i~~~~ 103 (104)
T PF00169_consen 81 SYLFSAESEEERKRWIQAIQKAI 103 (104)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHH
T ss_pred EEEEEcCCHHHHHHHHHHHHHHh
Confidence 99999999999999999999876
No 21
>cd01219 PH_FGD FGD (faciogenital dysplasia protein) pleckstrin homology (PH) domain. FGD (faciogenital dysplasia protein) pleckstrin homology (PH) domain. FGD has a RhoGEF (DH) domain, followed by a PH domain, a FYVE domain and a C-terminal PH domain. FGD is a guanine nucleotide exchange factor that activates the Rho GTPase Cdc42. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.63 E-value=1.4e-16 Score=107.95 Aligned_cols=87 Identities=17% Similarity=0.085 Sum_probs=68.7
Q ss_pred CCCCcchhHhHhhhhcCCCeeeccccceeeeeccccc-ccCCCCCcceeecceEEEEecc-C---------CceeEEEec
Q 045778 28 GEIGPANKARRLHQNLAPPLVHLKQGEHLWFKDSHNI-TRGSTPRGFIPVGTCLTVKCAE-D---------GEYTMYSVA 96 (132)
Q Consensus 28 ~~~GwL~Kqg~~~k~WkrRwFvL~~~~L~yyk~~~~~-~~~~~~~g~I~L~~~~~v~~~~-~---------~~r~~~f~A 96 (132)
+++|||.|+|...++|+.|||.|-++.|.|++..... .....+++.|+|.++.+..... + ..++|+++|
T Consensus 3 ikeG~L~K~~~~~~~~k~RyffLFnd~Ll~~~~~~~~~~~~y~~~~~i~l~~~~v~~~~~~~~~~~F~I~~~~rsf~l~A 82 (101)
T cd01219 3 LKEGSVLKISSTTEKTEERYLFLFNDLLLYCVPRKMIGGSKFKVRARIDVSGMQVCEGDNLERPHSFLVSGKQRCLELQA 82 (101)
T ss_pred ccceEEEEEecCCCCceeEEEEEeCCEEEEEEcccccCCCcEEEEEEEecccEEEEeCCCCCcCceEEEecCCcEEEEEc
Confidence 6899999999988999999999999999999854200 0113556889998875443211 1 669999999
Q ss_pred cchhhhccchhhhhhhhh
Q 045778 97 DTEKEKGERINSIGRAIV 114 (132)
Q Consensus 97 ~s~~e~~~Wi~aI~~~i~ 114 (132)
+|++|+++||.||+.+|.
T Consensus 83 ~s~eEk~~W~~ai~~~i~ 100 (101)
T cd01219 83 RTQKEKNDWVQAIFSIID 100 (101)
T ss_pred CCHHHHHHHHHHHHHHhh
Confidence 999999999999999875
No 22
>PF15409 PH_8: Pleckstrin homology domain
Probab=99.61 E-value=4.7e-16 Score=103.35 Aligned_cols=78 Identities=17% Similarity=0.235 Sum_probs=63.9
Q ss_pred CcchhH-hHhhhhcCCCeeec--cccceeeeecccccccCCCCCcceeecceEEEEeccC-------CceeEEEeccchh
Q 045778 31 GPANKA-RRLHQNLAPPLVHL--KQGEHLWFKDSHNITRGSTPRGFIPVGTCLTVKCAED-------GEYTMYSVADTEK 100 (132)
Q Consensus 31 GwL~Kq-g~~~k~WkrRwFvL--~~~~L~yyk~~~~~~~~~~~~g~I~L~~~~~v~~~~~-------~~r~~~f~A~s~~ 100 (132)
|||.|+ ....+.|++|||+| +.+.|.||+++. +..++|.|+|..+........ +...|+|.|.|++
T Consensus 1 G~llKkrr~~lqG~~kRyFvL~~~~G~LsYy~~~~----~~~~rGsi~v~~a~is~~~~~~~I~idsg~~i~hLKa~s~~ 76 (89)
T PF15409_consen 1 GWLLKKRRKPLQGWHKRYFVLDFEKGTLSYYRNQN----SGKLRGSIDVSLAVISANKKSRRIDIDSGDEIWHLKAKSQE 76 (89)
T ss_pred CcceeeccccCCCceeEEEEEEcCCcEEEEEecCC----CCeeEeEEEccceEEEecCCCCEEEEEcCCeEEEEEcCCHH
Confidence 888887 45789999999999 899999999885 347899999987643211111 7889999999999
Q ss_pred hhccchhhhhhh
Q 045778 101 EKGERINSIGRA 112 (132)
Q Consensus 101 e~~~Wi~aI~~~ 112 (132)
+.+.|+.||+.+
T Consensus 77 ~f~~Wv~aL~~a 88 (89)
T PF15409_consen 77 DFQRWVSALQKA 88 (89)
T ss_pred HHHHHHHHHHhc
Confidence 999999999864
No 23
>PF15413 PH_11: Pleckstrin homology domain; PDB: 3MDB_D 3FEH_A 3LJU_X 3FM8_C.
Probab=99.57 E-value=5e-16 Score=107.25 Aligned_cols=84 Identities=13% Similarity=0.087 Sum_probs=49.5
Q ss_pred CCCcchhHhHh-hhhcCCCeeecc-ccceeeeecccccc---------cCCCCCcceeec----ceEEEEe---------
Q 045778 29 EIGPANKARRL-HQNLAPPLVHLK-QGEHLWFKDSHNIT---------RGSTPRGFIPVG----TCLTVKC--------- 84 (132)
Q Consensus 29 ~~GwL~Kqg~~-~k~WkrRwFvL~-~~~L~yyk~~~~~~---------~~~~~~g~I~L~----~~~~v~~--------- 84 (132)
++|||.|+++. .+.||+|||+|. ++.|.||+.+.... ....+.|.+... ....++.
T Consensus 1 k~G~l~K~~~~~~kgWk~RwFiL~k~~~L~YyK~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (112)
T PF15413_consen 1 KEGYLYKWGNKFGKGWKKRWFILRKDGVLSYYKIPRDKKDVRIIGEESSRVIRKGDWSISRRSSRIQGIKDKNPFGEIHL 80 (112)
T ss_dssp EEEEEEE--TTS-S--EEEEEEEE-TTEEEEESS-------------TT-SB-SEEEE---GGGT-EEEES-T--SS-SS
T ss_pred CCceEEEecCCCCcCccccEEEEEeCCEEEEeecccccccccccccchhceEeecccCcccccccccccccCCcccCcCC
Confidence 47999999987 899999999999 99999999932100 001111211111 0010010
Q ss_pred ----ccCCceeEEEeccchhhhccchhhhhhh
Q 045778 85 ----AEDGEYTMYSVADTEKEKGERINSIGRA 112 (132)
Q Consensus 85 ----~~~~~r~~~f~A~s~~e~~~Wi~aI~~~ 112 (132)
...+.++|+|.|+|.+|+.+||.||+++
T Consensus 81 ~~~~i~T~~kt~~l~~~t~~d~~~Wi~aL~~~ 112 (112)
T PF15413_consen 81 KVFSIFTPTKTFHLRCETREDRYDWIEALQEA 112 (112)
T ss_dssp EEEEEE-SS-EEEEEESSHHHHHHHHHHHHH-
T ss_pred CCcEEECCCcEEEEEECCHHHHHHHHHHHHhC
Confidence 0117899999999999999999999874
No 24
>cd01254 PH_PLD Phospholipase D (PLD) pleckstrin homology (PH) domain. Phospholipase D (PLD) pleckstrin homology (PH) domain. PLD hydrolyzes phosphatidylcholine to phosphatidic acid (PtdOH), which can bind target proteins. PLD contains a PH domain, a PX domain and four conserved PLD signature domains. The PLD PH domain is specific for bisphosphorylated inositides. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.56 E-value=2.4e-15 Score=105.10 Aligned_cols=67 Identities=10% Similarity=0.097 Sum_probs=55.4
Q ss_pred hcCCCeeeccccceeeeecccccccCCCCCcceeecceEEEEe--c---------------------cCCceeEEEeccc
Q 045778 42 NLAPPLVHLKQGEHLWFKDSHNITRGSTPRGFIPVGTCLTVKC--A---------------------EDGEYTMYSVADT 98 (132)
Q Consensus 42 ~WkrRwFvL~~~~L~yyk~~~~~~~~~~~~g~I~L~~~~~v~~--~---------------------~~~~r~~~f~A~s 98 (132)
+|++|||+|+++.|.||+++. +..|+|+|.++....+.. . .++.|+|.|.|+|
T Consensus 32 ~w~kRWFvlr~s~L~Y~~~~~----~~~~~~vil~D~~f~v~~~~~~~~~~~~~~~~~~~~~~~~~i~t~~R~~~l~a~s 107 (121)
T cd01254 32 RWQKRWFIVKESFLAYMDDPS----SAQILDVILFDVDFKVNGGGKEDISLAVELKDITGLRHGLKITNSNRSLKLKCKS 107 (121)
T ss_pred CCcceeEEEeCCEEEEEcCCC----CCceeeEEEEcCCccEEeCCcccccccccccccCCCceEEEEEcCCcEEEEEeCC
Confidence 799999999999999999985 468999999975333321 1 1188999999999
Q ss_pred hhhhccchhhhhhh
Q 045778 99 EKEKGERINSIGRA 112 (132)
Q Consensus 99 ~~e~~~Wi~aI~~~ 112 (132)
+.++++||++|+.|
T Consensus 108 ~~~~~~Wi~~i~~a 121 (121)
T cd01254 108 SRKLKQWMASIEDA 121 (121)
T ss_pred HHHHHHHHHHHHhC
Confidence 99999999999864
No 25
>cd01237 Unc112 Unc-112 pleckstrin homology (PH) domain. Unc-112 pleckstrin homology (PH) domain. Unc-112 and related proteins contain two FERM domains with a PH domain between them. Both the PH and FERM domains have a PH-like fold. The FERM domains are likely responsible for the role of Unc-112 in organizing beta-integrin. The specific role of the Unc-112 PH domain is not known, but it is predicted to be involved in mediating membrane interactions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.53 E-value=9.5e-15 Score=99.76 Aligned_cols=75 Identities=12% Similarity=0.209 Sum_probs=56.0
Q ss_pred HhHhhhhcCCCeeeccccceeeeecccccccCCCCCcceeecceEEEEec---------------cCCceeEEEeccchh
Q 045778 36 ARRLHQNLAPPLVHLKQGEHLWFKDSHNITRGSTPRGFIPVGTCLTVKCA---------------EDGEYTMYSVADTEK 100 (132)
Q Consensus 36 qg~~~k~WkrRwFvL~~~~L~yyk~~~~~~~~~~~~g~I~L~~~~~v~~~---------------~~~~r~~~f~A~s~~ 100 (132)
+.-..|.||+|||+|+|+.|+||++..+. ...|.+.|.|.+|...... +++.++|+|.|+|++
T Consensus 13 ~~~~~K~~KrrwF~lk~~~L~YyK~kee~--~~~p~i~lnl~gcev~~dv~~~~~kf~I~l~~ps~~~~r~y~l~cdsEe 90 (106)
T cd01237 13 KKLTLKGYKQYWFTFRDTSISYYKSKEDS--NGAPIGQLNLKGCEVTPDVNVAQQKFHIKLLIPTAEGMNEVWLRCDNEK 90 (106)
T ss_pred chhhhhhheeEEEEEeCCEEEEEccchhc--CCCCeEEEecCceEEcccccccccceEEEEecCCccCCeEEEEECCCHH
Confidence 33456889999999999999999998521 1345555566777543211 226699999999999
Q ss_pred hhccchhhhhhh
Q 045778 101 EKGERINSIGRA 112 (132)
Q Consensus 101 e~~~Wi~aI~~~ 112 (132)
++++||.|++.|
T Consensus 91 qya~Wmaa~rla 102 (106)
T cd01237 91 QYAKWMAACRLA 102 (106)
T ss_pred HHHHHHHHHHHh
Confidence 999999998654
No 26
>cd01253 PH_beta_spectrin Beta-spectrin pleckstrin homology (PH) domain. Beta-spectrin pleckstrin homology (PH) domain. Beta spectrin binds actin and functions as a major component of the cytoskeleton underlying cellular membranes. Beta spectrin consists of multiple spectrin repeats followed by a PH domain, which binds to Inositol-1,4,5-Trisphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. PH domains are often involved in targeting proteins to the plasma membrane via lipid binding. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.52 E-value=7.6e-15 Score=99.25 Aligned_cols=81 Identities=11% Similarity=0.075 Sum_probs=57.2
Q ss_pred CCCcch-hH-----h--HhhhhcCCCeeeccccceeeeecccccccCCCCCc--ceeecceEEEEecc-----C------
Q 045778 29 EIGPAN-KA-----R--RLHQNLAPPLVHLKQGEHLWFKDSHNITRGSTPRG--FIPVGTCLTVKCAE-----D------ 87 (132)
Q Consensus 29 ~~GwL~-Kq-----g--~~~k~WkrRwFvL~~~~L~yyk~~~~~~~~~~~~g--~I~L~~~~~v~~~~-----~------ 87 (132)
++|+|. |+ | ...+.|++|||+|+++.|+||+++.. ....+.+ .|+|.++.+....+ .
T Consensus 1 ~~g~l~rk~~~~~~g~~~~~~~Wk~r~~vL~~~~L~~ykd~~~--~~~~~~~~~~i~l~~~~i~~~~~~~k~~~~F~l~~ 78 (104)
T cd01253 1 MEGSLERKHELESGGKKASNRSWDNVYGVLCGQSLSFYKDEKM--AAENVHGEPPVDLTGAQCEVASDYTKKKHVFRLRL 78 (104)
T ss_pred CCceEeEEEEeecCCcccCCCCcceEEEEEeCCEEEEEecCcc--cccCCCCCCcEeccCCEEEecCCcccCceEEEEEe
Confidence 367777 32 1 24689999999999999999998852 1123344 66675543211111 1
Q ss_pred -CceeEEEeccchhhhccchhhhhh
Q 045778 88 -GEYTMYSVADTEKEKGERINSIGR 111 (132)
Q Consensus 88 -~~r~~~f~A~s~~e~~~Wi~aI~~ 111 (132)
+.++|+|+|+|++++++||.||+.
T Consensus 79 ~~~~~~~f~a~s~e~~~~Wi~aL~~ 103 (104)
T cd01253 79 PDGAEFLFQAPDEEEMSSWVRALKS 103 (104)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhc
Confidence 668999999999999999999975
No 27
>smart00233 PH Pleckstrin homology domain. Domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids.
Probab=99.45 E-value=6.3e-14 Score=90.24 Aligned_cols=85 Identities=16% Similarity=0.248 Sum_probs=67.6
Q ss_pred CCCCcchhHhH-hhhhcCCCeeeccccceeeeecccccccCCCCCcceeecceEEEEecc------C-------Cce-eE
Q 045778 28 GEIGPANKARR-LHQNLAPPLVHLKQGEHLWFKDSHNITRGSTPRGFIPVGTCLTVKCAE------D-------GEY-TM 92 (132)
Q Consensus 28 ~~~GwL~Kqg~-~~k~WkrRwFvL~~~~L~yyk~~~~~~~~~~~~g~I~L~~~~~v~~~~------~-------~~r-~~ 92 (132)
.++|||.+++. ....|++|||+|.++.|.||+++.. .....+.+.|+|.++....... . +.+ ++
T Consensus 2 ~~~G~l~~~~~~~~~~~~~~~~~L~~~~l~~~~~~~~-~~~~~~~~~i~l~~~~v~~~~~~~~~~~~~~f~l~~~~~~~~ 80 (102)
T smart00233 2 IKEGWLYKKSGGKKKSWKKRYFVLFNSTLLYYKSEKA-KKDYKPKGSIDLSGITVREAPDPDSAKKPHCFEIKTADRRSY 80 (102)
T ss_pred ceeEEEEEeCCCccCCceEEEEEEECCEEEEEeCCCc-cccCCCceEEECCcCEEEeCCCCccCCCceEEEEEecCCceE
Confidence 57999999876 6789999999999999999998852 1125788999999874432221 1 344 89
Q ss_pred EEeccchhhhccchhhhhhhh
Q 045778 93 YSVADTEKEKGERINSIGRAI 113 (132)
Q Consensus 93 ~f~A~s~~e~~~Wi~aI~~~i 113 (132)
+|.|+|+++++.|+.+|+.++
T Consensus 81 ~f~~~s~~~~~~W~~~i~~~~ 101 (102)
T smart00233 81 LLQAESEEEREEWVDALRKAI 101 (102)
T ss_pred EEEcCCHHHHHHHHHHHHHhh
Confidence 999999999999999998765
No 28
>cd00821 PH Pleckstrin homology (PH) domain. Pleckstrin homology (PH) domain. PH domains are only found in eukaryotes. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.38 E-value=7.4e-13 Score=84.48 Aligned_cols=83 Identities=18% Similarity=0.231 Sum_probs=65.2
Q ss_pred CCCcchhHhHhh-hhcCCCeeeccccceeeeecccccccCCCCCcceeecceEEEEecc----C--------CceeEEEe
Q 045778 29 EIGPANKARRLH-QNLAPPLVHLKQGEHLWFKDSHNITRGSTPRGFIPVGTCLTVKCAE----D--------GEYTMYSV 95 (132)
Q Consensus 29 ~~GwL~Kqg~~~-k~WkrRwFvL~~~~L~yyk~~~~~~~~~~~~g~I~L~~~~~v~~~~----~--------~~r~~~f~ 95 (132)
++|||.+++... ..|++|||+|.++.|++|...... ....+.+.|+|.++....... . +.+.++|+
T Consensus 1 ~~G~l~~~~~~~~~~w~~~~~~L~~~~l~~~~~~~~~-~~~~~~~~i~l~~~~v~~~~~~~~~~~~f~i~~~~~~~~~~~ 79 (96)
T cd00821 1 KEGYLLKKTGKLRKGWKRRWFVLFNDLLLYYKKKSSK-KSYKPKGSIPLSGAEVEESPDDSGRKNCFEIRTPDGRSYLLQ 79 (96)
T ss_pred CcchhhhhhChhhCCccEEEEEEECCEEEEEECCCCC-cCCCCcceEEcCCCEEEECCCcCCCCcEEEEecCCCcEEEEE
Confidence 479999987655 889999999999999999877411 126789999999865433221 1 33899999
Q ss_pred ccchhhhccchhhhhhh
Q 045778 96 ADTEKEKGERINSIGRA 112 (132)
Q Consensus 96 A~s~~e~~~Wi~aI~~~ 112 (132)
|+|++|++.|+.+|+.+
T Consensus 80 ~~s~~~~~~W~~~l~~~ 96 (96)
T cd00821 80 AESEEEREEWIEALQSA 96 (96)
T ss_pred eCCHHHHHHHHHHHhcC
Confidence 99999999999999753
No 29
>cd01230 PH_EFA6 EFA6 Pleckstrin Homology (PH) domain. EFA6 Pleckstrin Homology (PH) domain. EFA6 is an guanine nucleotide exchange factor for ARF6, which is involved in membrane recycling. It consists of a SEC7 domain followed by a PH domain. The EFA6 PH domain regulates its association with the plasma membrane. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.37 E-value=6.3e-13 Score=92.60 Aligned_cols=78 Identities=15% Similarity=0.038 Sum_probs=58.2
Q ss_pred hhhcCCCeeeccccceeeeecccccccC---CCCCcceeecceE-EEEeccC-----------CceeEEEeccchhhhcc
Q 045778 40 HQNLAPPLVHLKQGEHLWFKDSHNITRG---STPRGFIPVGTCL-TVKCAED-----------GEYTMYSVADTEKEKGE 104 (132)
Q Consensus 40 ~k~WkrRwFvL~~~~L~yyk~~~~~~~~---~~~~g~I~L~~~~-~v~~~~~-----------~~r~~~f~A~s~~e~~~ 104 (132)
.+.|+++|+||+|+.|+.|+++...... ......|.|..+. .+..... .++.|+|+|.+++|++.
T Consensus 23 ~R~Wk~~y~vL~g~~L~~yKDe~~~~~~~~~~~~~~~Isi~~a~~~ia~dy~Kr~~VF~L~~~~g~~~lfqA~~~ee~~~ 102 (117)
T cd01230 23 KRSWKMFYGILRGLVLYLQKDEHKPGKSLSETELKNAISIHHALATRASDYSKKPHVFRLRTADWREFLFQTSSLKELQS 102 (117)
T ss_pred CCcceEEEEEEECCEEEEEccCcccccccccccccceEEeccceeEeeccccCCCcEEEEEcCCCCEEEEECCCHHHHHH
Confidence 4789999999999999999998521011 2345778888764 2221111 56899999999999999
Q ss_pred chhhhhhhhhhhc
Q 045778 105 RINSIGRAIVQHS 117 (132)
Q Consensus 105 Wi~aI~~~i~~~~ 117 (132)
||.+|+.+.+..+
T Consensus 103 Wi~~I~~~~~~~s 115 (117)
T cd01230 103 WIERINVVAAAFS 115 (117)
T ss_pred HHHHHHHHHHhcc
Confidence 9999998876554
No 30
>KOG1090 consensus Predicted dual-specificity phosphatase [General function prediction only]
Probab=99.33 E-value=2.3e-13 Score=120.06 Aligned_cols=85 Identities=13% Similarity=0.129 Sum_probs=71.6
Q ss_pred cCCCCCCcchhHhHhhhhcCCCeeeccc--cceeeeecccccccCCCCCcceeecceEEEEec--c---C--------Cc
Q 045778 25 SQPGEIGPANKARRLHQNLAPPLVHLKQ--GEHLWFKDSHNITRGSTPRGFIPVGTCLTVKCA--E---D--------GE 89 (132)
Q Consensus 25 ~~~~~~GwL~Kqg~~~k~WkrRwFvL~~--~~L~yyk~~~~~~~~~~~~g~I~L~~~~~v~~~--~---~--------~~ 89 (132)
.|...+|+|+|+|..+|.|+.|||||.. .+|+||.+.. +++|+|.|+|..+.+|... + . ..
T Consensus 1632 eNr~~eG~LyKrGA~lK~Wk~RwFVLd~~khqlrYYd~~e----dt~pkG~IdLaevesv~~~~~k~vdekgffdlktt~ 1707 (1732)
T KOG1090|consen 1632 ENRIPEGYLYKRGAKLKLWKPRWFVLDPDKHQLRYYDDFE----DTKPKGCIDLAEVESVALIGPKTVDEKGFFDLKTTN 1707 (1732)
T ss_pred cccCcccchhhcchhhcccccceeEecCCccceeeecccc----cccccchhhhhhhhhhcccCccccCccceeeeehhh
Confidence 3456799999999999999999999974 4699998885 5899999999876655331 1 1 77
Q ss_pred eeEEEeccchhhhccchhhhhhhh
Q 045778 90 YTMYSVADTEKEKGERINSIGRAI 113 (132)
Q Consensus 90 r~~~f~A~s~~e~~~Wi~aI~~~i 113 (132)
|+|-|+|.|..+.++|+..|++|+
T Consensus 1708 rvynf~a~nin~AqqWve~iqscl 1731 (1732)
T KOG1090|consen 1708 RVYNFCAQNINLAQQWVECIQSCL 1731 (1732)
T ss_pred HHHHHHhccchHHHHHHHHHHHhh
Confidence 899999999999999999999987
No 31
>cd01220 PH_CDEP Chondrocyte-derived ezrin-like domain containing protein (CDEP) Pleckstrin homology (PH) domain. Chondrocyte-derived ezrin-like domain containing protein (CDEP) Pleckstrin homology (PH) domain. CDEP consists of a Ferm domain, a rhoGEF (DH) domain followed by two PH domains. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.33 E-value=6.5e-13 Score=89.96 Aligned_cols=84 Identities=18% Similarity=0.134 Sum_probs=59.6
Q ss_pred CCCCcchhHhHhhhhcCCCeeeccccceeeeecccccccCCCCCcceeecceEEEEeccC------------CceeEEEe
Q 045778 28 GEIGPANKARRLHQNLAPPLVHLKQGEHLWFKDSHNITRGSTPRGFIPVGTCLTVKCAED------------GEYTMYSV 95 (132)
Q Consensus 28 ~~~GwL~Kqg~~~k~WkrRwFvL~~~~L~yyk~~~~~~~~~~~~g~I~L~~~~~v~~~~~------------~~r~~~f~ 95 (132)
+++|+|.|.++. +.|+|+||.+.+..||+...... ...-.++|.|+|.++.+ ...++ +.+.|.|+
T Consensus 3 ikEG~L~K~~~k-~~~~R~~FLFnD~LlY~~~~~~~-~~~y~~~~~i~L~~~~V-~~~~~~~~~~~~F~I~~~~ks~~l~ 79 (99)
T cd01220 3 IRQGCLLKLSKK-GLQQRMFFLFSDLLLYTSKSPTD-QNSFRILGHLPLRGMLT-EESEHEWGVPHCFTIFGGQCAITVA 79 (99)
T ss_pred eeEEEEEEEeCC-CCceEEEEEccceEEEEEeecCC-CceEEEEEEEEcCceEE-eeccCCcCCceeEEEEcCCeEEEEE
Confidence 579999998753 45666566666655555444321 00125789999998753 32222 67899999
Q ss_pred ccchhhhccchhhhhhhhh
Q 045778 96 ADTEKEKGERINSIGRAIV 114 (132)
Q Consensus 96 A~s~~e~~~Wi~aI~~~i~ 114 (132)
|+|++|+++||++|+.||.
T Consensus 80 A~s~~Ek~~Wi~~i~~aI~ 98 (99)
T cd01220 80 ASTRAEKEKWLADLSKAIA 98 (99)
T ss_pred CCCHHHHHHHHHHHHHHhh
Confidence 9999999999999999884
No 32
>cd01234 PH_CADPS CADPS (Ca2+-dependent activator protein) Pleckstrin homology (PH) domain. CADPS (Ca2+-dependent activator protein) Pleckstrin homology (PH) domain. CADPS is a calcium-dependent activator involved in secretion. It contains a central PH domain that binds to phosphoinositide 4,5 bisphosphate containing liposomes. However, membrane association may also be mediated by binding to phosphatidlyserine via general electrostatic interactions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.31 E-value=8.6e-13 Score=89.57 Aligned_cols=82 Identities=16% Similarity=0.176 Sum_probs=63.3
Q ss_pred CCCCcchhHhH-hhhhcCCCeeeccccc-----eeeeecccccccCCCCCcceeecceEEEEeccC--------------
Q 045778 28 GEIGPANKARR-LHQNLAPPLVHLKQGE-----HLWFKDSHNITRGSTPRGFIPVGTCLTVKCAED-------------- 87 (132)
Q Consensus 28 ~~~GwL~Kqg~-~~k~WkrRwFvL~~~~-----L~yyk~~~~~~~~~~~~g~I~L~~~~~v~~~~~-------------- 87 (132)
.++|||.|+|+ ..|.||||||+|.+-. |+-|+.+. +.|...|.|++.. |+=++.
T Consensus 3 k~sGyL~k~Gg~~~KkWKKRwFvL~qvsQYtfamcsy~ekk-----s~P~e~~qldGyT-vDy~~~~~~~~~~~~~~~gg 76 (117)
T cd01234 3 KHCGYLYAIGKNVWKKWKKRFFVLVQVSQYTFAMCSYREKK-----AEPTEFIQLDGYT-VDYMPESDPDPNSELSLQGG 76 (117)
T ss_pred ceeEEEEeccchhhhhhheeEEEEEchhHHHHHHHhhhhhc-----CCchhheeecceE-EeccCCCCCCcccccccccc
Confidence 47999999997 8899999999999764 44555553 6789999998863 321111
Q ss_pred --------CceeEEEeccchhhhccchhhhhhhhhh
Q 045778 88 --------GEYTMYSVADTEKEKGERINSIGRAIVQ 115 (132)
Q Consensus 88 --------~~r~~~f~A~s~~e~~~Wi~aI~~~i~~ 115 (132)
.+.+..|+++++.|+.-||+||=+|..+
T Consensus 77 ~~ff~avkegd~~~fa~~de~~r~lwvqa~yratgq 112 (117)
T cd01234 77 RHFFNAVKEGDELKFATDDENERHLWVQAMYRATGQ 112 (117)
T ss_pred hhhhheeccCcEEEEeccchHHHHHHHHHHHHHcCc
Confidence 4557899999999999999999666544
No 33
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.28 E-value=1.7e-12 Score=104.61 Aligned_cols=90 Identities=18% Similarity=0.168 Sum_probs=62.8
Q ss_pred cCCCCCCcchhHhHhhhhcCCCeeecc-ccceeeeecccc-cccCCCCCcceeecceEEEEeccC-------------Cc
Q 045778 25 SQPGEIGPANKARRLHQNLAPPLVHLK-QGEHLWFKDSHN-ITRGSTPRGFIPVGTCLTVKCAED-------------GE 89 (132)
Q Consensus 25 ~~~~~~GwL~Kqg~~~k~WkrRwFvL~-~~~L~yyk~~~~-~~~~~~~~g~I~L~~~~~v~~~~~-------------~~ 89 (132)
.+++++|||+|+|..+|+|+.|||+|. ++.|.-|++.-. ......|..-+.+..|.+++.... ..
T Consensus 13 ~~vvkEgWlhKrGE~IknWRpRYF~l~~DG~~~Gyr~kP~~~~~~p~pLNnF~v~~cq~m~~erPrPntFiiRcLQWTTV 92 (516)
T KOG0690|consen 13 EDVVKEGWLHKRGEHIKNWRPRYFLLFNDGTLLGYRSKPKEVQPTPEPLNNFMVRDCQTMKTERPRPNTFIIRCLQWTTV 92 (516)
T ss_pred hhhHHhhhHhhcchhhhcccceEEEEeeCCceEeeccCCccCCCCcccccchhhhhhhhhhccCCCCceEEEEeeeeeee
Confidence 457899999999999999999999997 567888876632 111224455555566655432211 11
Q ss_pred eeEEEeccchhhhccchhhhhhhhh
Q 045778 90 YTMYSVADTEKEKGERINSIGRAIV 114 (132)
Q Consensus 90 r~~~f~A~s~~e~~~Wi~aI~~~i~ 114 (132)
=.-.|.++|++++++|+.||+..-.
T Consensus 93 IERTF~ves~~eRq~W~~AIq~vsn 117 (516)
T KOG0690|consen 93 IERTFYVESAEERQEWIEAIQAVSN 117 (516)
T ss_pred eeeeeecCCHHHHHHHHHHHHHHhh
Confidence 1124779999999999999987644
No 34
>cd00900 PH-like Pleckstrin homology-like domain. Pleckstrin homology-like domain. This family includes the PH domain, both the Shc-like and IRS-like PTB domains, the ran-binding domain, the EVH1 domain, a domain in neurobeachin and the third domain of FERM. All of these domains have a PH fold, but lack significant sequence similarity. They are generally involved in targeting to protein to the appropriate cellular location or interacting with a binding partner. The PH domain is commonly found in eukaryotic signaling proteins. This domain family possesses multiple functions including the ability to bind inositol phosphates and to other proteins.
Probab=99.19 E-value=2.7e-11 Score=77.70 Aligned_cols=79 Identities=19% Similarity=0.186 Sum_probs=61.8
Q ss_pred CCCcchhHhHhh----hhcCCCeeeccccceeeeecccccccCCCCC-cceeecceEEEEecc------C------C---
Q 045778 29 EIGPANKARRLH----QNLAPPLVHLKQGEHLWFKDSHNITRGSTPR-GFIPVGTCLTVKCAE------D------G--- 88 (132)
Q Consensus 29 ~~GwL~Kqg~~~----k~WkrRwFvL~~~~L~yyk~~~~~~~~~~~~-g~I~L~~~~~v~~~~------~------~--- 88 (132)
.+|||.+++... ..|++|||+|.++.|++|+.+. ...+. +.+++.... +...+ . .
T Consensus 1 ~~g~l~~~~~~~~~~~~~w~~~~~~l~~~~l~~~~~~~----~~~~~~~~~~l~~~~-v~~~~~~~~~~~~F~i~~~~~~ 75 (99)
T cd00900 1 KEGYLLKLGSDDVSKGKRWKRRWFFLFDDGLLLYKSDD----KKEIKPGSIPLSEIS-VEEDPDGSDDPNCFAIVTKDRG 75 (99)
T ss_pred CccEEEEeCCCccccccCceeeEEEEECCEEEEEEcCC----CCcCCCCEEEccceE-EEECCCCCCCCceEEEECCCCC
Confidence 368998887654 7999999999999999999885 23344 678887765 33222 1 3
Q ss_pred ceeEEEeccchhhhccchhhhhhh
Q 045778 89 EYTMYSVADTEKEKGERINSIGRA 112 (132)
Q Consensus 89 ~r~~~f~A~s~~e~~~Wi~aI~~~ 112 (132)
.+.++|+|+|+++++.|+.+|+.+
T Consensus 76 ~~~~~~~~~~~~~~~~W~~al~~~ 99 (99)
T cd00900 76 RRVFVFQADSEEEAQEWVEALQQA 99 (99)
T ss_pred cEEEEEEcCCHHHHHHHHHHHhcC
Confidence 799999999999999999999753
No 35
>cd01256 PH_dynamin Dynamin pleckstrin homology (PH) domain. Dynamin pleckstrin homology (PH) domain. Dynamin is a GTPase that regulates endocytic vesicle formation. It has an N-terminal GTPase domain, followed by a PH domain, a GTPase effector domain and a C-terminal proline arginine rich domain. Dynamin-like proteins, which are found in metazoa, plants and yeast have the same domain architecture as dynamin, but lack the PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.15 E-value=2.8e-11 Score=81.55 Aligned_cols=80 Identities=15% Similarity=0.077 Sum_probs=62.0
Q ss_pred CCCCcchhHhH-hh-hhcCCCeeeccccceeeeecccccccCCCCCcceeecceEEEEeccC------------------
Q 045778 28 GEIGPANKARR-LH-QNLAPPLVHLKQGEHLWFKDSHNITRGSTPRGFIPVGTCLTVKCAED------------------ 87 (132)
Q Consensus 28 ~~~GwL~Kqg~-~~-k~WkrRwFvL~~~~L~yyk~~~~~~~~~~~~g~I~L~~~~~v~~~~~------------------ 87 (132)
++.|||.-..- .+ +.=|+|||||+.++|+||++.+ +..|+|.|+|.+... ...++
T Consensus 2 irkgwl~~~n~~~m~ggsK~~WFVLt~~~L~wykd~e----eKE~kyilpLdnLk~-Rdve~gf~sk~~~FeLfnpd~rn 76 (110)
T cd01256 2 IRKGWLSISNVGIMKGGSKDYWFVLTSESLSWYKDDE----EKEKKYMLPLDGLKL-RDIEGGFMSRNHKFALFYPDGRN 76 (110)
T ss_pred eeeeeEEeeccceecCCCcceEEEEecceeeeecccc----cccccceeeccccEE-EeecccccCCCcEEEEEcCcccc
Confidence 56799887642 33 4479999999999999999985 478999999987543 22111
Q ss_pred ---CceeEEEeccchhhhccchhhhhhh
Q 045778 88 ---GEYTMYSVADTEKEKGERINSIGRA 112 (132)
Q Consensus 88 ---~~r~~~f~A~s~~e~~~Wi~aI~~~ 112 (132)
..++.-|+|+|.++.+.|-.++-+|
T Consensus 77 vykd~k~lel~~~~~e~vdswkasflra 104 (110)
T cd01256 77 VYKDYKQLELGCETLEEVDSWKASFLRA 104 (110)
T ss_pred cccchheeeecCCCHHHHHHHHHHHHhc
Confidence 5667789999999999999887554
No 36
>PF15410 PH_9: Pleckstrin homology domain; PDB: 1WJM_A 1BTN_A 1MPH_A.
Probab=98.93 E-value=3.7e-10 Score=78.57 Aligned_cols=73 Identities=22% Similarity=0.282 Sum_probs=46.5
Q ss_pred hhhhcCCCeeeccccceeeeecccccc----------cCCCCCcceeecceEEEEeccC-------------CceeEEEe
Q 045778 39 LHQNLAPPLVHLKQGEHLWFKDSHNIT----------RGSTPRGFIPVGTCLTVKCAED-------------GEYTMYSV 95 (132)
Q Consensus 39 ~~k~WkrRwFvL~~~~L~yyk~~~~~~----------~~~~~~g~I~L~~~~~v~~~~~-------------~~r~~~f~ 95 (132)
..+.|+.-|+||+|+.|+.|++..... ....|.+.|+|..+... .+.+ .+..|.|+
T Consensus 22 ~~R~Wk~~y~vL~g~~L~~~k~~~~~~~~~~~~~~~~~~~~p~~~i~L~~a~a~-~a~dY~Kr~~VFrL~~~dg~e~Lfq 100 (119)
T PF15410_consen 22 SKRSWKQVYAVLQGGQLYFYKDEKSPASSTPPDIQSVENAKPDSSISLHHALAE-IASDYTKRKNVFRLRTADGSEYLFQ 100 (119)
T ss_dssp S---EEEEEEEEETTEEEEESSHHHHCCT-BS---SS--E-----EE-TT-EEE-EETTBTTCSSEEEEE-TTS-EEEEE
T ss_pred CCCCccEEeEEEECCEEEEEccCcccccCCcccccccccCcceeEEEecceEEE-eCcccccCCeEEEEEeCCCCEEEEE
Confidence 457899999999999999999943100 11235567899876532 2333 67899999
Q ss_pred ccchhhhccchhhhhhh
Q 045778 96 ADTEKEKGERINSIGRA 112 (132)
Q Consensus 96 A~s~~e~~~Wi~aI~~~ 112 (132)
|.|++||++||++|+-+
T Consensus 101 a~~~~~m~~Wi~~IN~~ 117 (119)
T PF15410_consen 101 ASDEEEMNEWIDAINYA 117 (119)
T ss_dssp -SSHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHhhh
Confidence 99999999999999864
No 37
>PF14593 PH_3: PH domain; PDB: 1W1H_D 1W1D_A 1W1G_A 2VKI_A.
Probab=98.92 E-value=2.5e-10 Score=77.99 Aligned_cols=83 Identities=18% Similarity=0.162 Sum_probs=60.2
Q ss_pred CCCCCCcchhHhHhhhhcCCCeeecccc-ceeeeecccccccCCCCCcceeecceEEEEeccC-------CceeEEEecc
Q 045778 26 QPGEIGPANKARRLHQNLAPPLVHLKQG-EHLWFKDSHNITRGSTPRGFIPVGTCLTVKCAED-------GEYTMYSVAD 97 (132)
Q Consensus 26 ~~~~~GwL~Kqg~~~k~WkrRwFvL~~~-~L~yyk~~~~~~~~~~~~g~I~L~~~~~v~~~~~-------~~r~~~f~A~ 97 (132)
.++++|++.|+.+.+ .|+|+|+|++. +|+|+.... ...+|.|+++.+..++.... +.|+|+|..
T Consensus 12 ~Il~~g~v~K~kgl~--~kkR~liLTd~PrL~Yvdp~~-----~~~KGeI~~~~~l~v~~k~~~~F~I~tp~RtY~l~d- 83 (104)
T PF14593_consen 12 LILKQGYVKKRKGLF--AKKRQLILTDGPRLFYVDPKK-----MVLKGEIPWSKELSVEVKSFKTFFIHTPKRTYYLED- 83 (104)
T ss_dssp -EEEEEEEEEEETTE--EEEEEEEEETTTEEEEEETTT-----TEEEEEE--STT-EEEECSSSEEEEEETTEEEEEE--
T ss_pred eEEEEEEEEEeeceE--EEEEEEEEccCCEEEEEECCC-----CeECcEEecCCceEEEEccCCEEEEECCCcEEEEEC-
Confidence 467899999998777 99999999988 666665553 35689999997655554332 899999876
Q ss_pred chhhhccchhhhhhhhhhh
Q 045778 98 TEKEKGERINSIGRAIVQH 116 (132)
Q Consensus 98 s~~e~~~Wi~aI~~~i~~~ 116 (132)
.+.....|+++|+..+.+.
T Consensus 84 ~~~~A~~W~~~I~~~~~~~ 102 (104)
T PF14593_consen 84 PEGNAQQWVEAIEEVKKQY 102 (104)
T ss_dssp TTS-HHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHh
Confidence 6667889999999987653
No 38
>KOG3640 consensus Actin binding protein Anillin [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton]
Probab=98.86 E-value=6e-10 Score=98.16 Aligned_cols=88 Identities=19% Similarity=0.185 Sum_probs=67.4
Q ss_pred CCCCCcchh--HhHhhhhcCCCeeeccccceeeeecccccccCCCCCcceeecceEEEE--ecc----------------
Q 045778 27 PGEIGPANK--ARRLHQNLAPPLVHLKQGEHLWFKDSHNITRGSTPRGFIPVGTCLTVK--CAE---------------- 86 (132)
Q Consensus 27 ~~~~GwL~K--qg~~~k~WkrRwFvL~~~~L~yyk~~~~~~~~~~~~g~I~L~~~~~v~--~~~---------------- 86 (132)
+...|||+- -+..++.|+||||+|.|+.+.|.+.+.+- +-..|.|.|||+.|+.-. .+.
T Consensus 990 VEYrGFLtmfed~sgfGaWhRyWc~L~gg~I~fWk~PdDE-krK~Pig~IDLt~CTsq~ie~a~rdicar~ntFhie~~r 1068 (1116)
T KOG3640|consen 990 VEYRGFLTMFEDGSGFGAWHRYWCALHGGEIKFWKYPDDE-KRKVPIGQIDLTKCTSQSIEEARRDICARPNTFHIEVWR 1068 (1116)
T ss_pred eeeeeeeeeeeccCCCchhhhhhHHhcCCeeeeecCcchh-cccCcceeeehhhhhccccccchhhhccCCceeEEEeec
Confidence 345788775 35567889999999999999999988642 347899999999985421 110
Q ss_pred ---C-------Cce-eEEEeccchhhhccchhhhhhhhhh
Q 045778 87 ---D-------GEY-TMYSVADTEKEKGERINSIGRAIVQ 115 (132)
Q Consensus 87 ---~-------~~r-~~~f~A~s~~e~~~Wi~aI~~~i~~ 115 (132)
+ ..| ...|+||+.+|++.|+.+|+.++..
T Consensus 1069 Pl~~Dqep~~ie~r~Rv~LaADTkeel~~Wls~iN~tL~~ 1108 (1116)
T KOG3640|consen 1069 PLEDDQEPLLIEKRLRVMLAADTKEELQSWLSAINDTLKQ 1108 (1116)
T ss_pred ccccccCcchhhhcceeeeecccHHHHHHHHHHHHHHHHH
Confidence 0 233 6789999999999999999998754
No 39
>cd01218 PH_phafin2 Phafin2 Pleckstrin Homology (PH) domain. Phafin2 Pleckstrin Homology (PH) domain. Phafin contains a PH domain and a FYVE domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=98.85 E-value=3.1e-09 Score=72.58 Aligned_cols=86 Identities=13% Similarity=0.066 Sum_probs=64.8
Q ss_pred CCCCcchhHhHhhhhcCCCeeeccccceeeeecccccccCCCCCcceeecceEEEEecc-----C------CceeEEEec
Q 045778 28 GEIGPANKARRLHQNLAPPLVHLKQGEHLWFKDSHNITRGSTPRGFIPVGTCLTVKCAE-----D------GEYTMYSVA 96 (132)
Q Consensus 28 ~~~GwL~Kqg~~~k~WkrRwFvL~~~~L~yyk~~~~~~~~~~~~g~I~L~~~~~v~~~~-----~------~~r~~~f~A 96 (132)
+++|-|.|.. .|.-+.|+|.|=++.|.|-+-.. ..+.-...+.|+|.++.+..... + +.++|.++|
T Consensus 5 i~eG~L~K~~--rk~~~~R~ffLFnD~LvY~~~~~-~~~~~~~~~~i~L~~~~v~~~~d~~~~~n~f~I~~~~kSf~v~A 81 (104)
T cd01218 5 VGEGVLTKMC--RKKPKQRQFFLFNDILVYGNIVI-SKKKYNKQHILPLEGVQVESIEDDGIERNGWIIKTPTKSFAVYA 81 (104)
T ss_pred EecCcEEEee--cCCCceEEEEEecCEEEEEEeec-CCceeeEeeEEEccceEEEecCCcccccceEEEecCCeEEEEEc
Confidence 5689999987 47788899999999999854311 01123456889999875432221 1 789999999
Q ss_pred cchhhhccchhhhhhhhhhh
Q 045778 97 DTEKEKGERINSIGRAIVQH 116 (132)
Q Consensus 97 ~s~~e~~~Wi~aI~~~i~~~ 116 (132)
+|++|+.+|+++|+.|+.+.
T Consensus 82 ~s~~eK~eWl~~i~~ai~~~ 101 (104)
T cd01218 82 ATETEKREWMLHINKCVTDL 101 (104)
T ss_pred CCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998763
No 40
>cd01242 PH_ROK Rok (Rho- associated kinase) pleckstrin homology (PH) domain. Rok (Rho- associated kinase) pleckstrin homology (PH) domain. Rok is a serine/threonine kinase that binds GTP-rho. It consists of a kinase domain, a coiled coil region and a PH domain. The Rok PH domain is interrupted by a C1 domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.82 E-value=4.1e-09 Score=72.37 Aligned_cols=85 Identities=13% Similarity=0.206 Sum_probs=61.3
Q ss_pred CCCcchh--HhHh--hhhcCCCeeeccccceeeeecccccccCCCCCcceeecceEEEEec----------cC-------
Q 045778 29 EIGPANK--ARRL--HQNLAPPLVHLKQGEHLWFKDSHNITRGSTPRGFIPVGTCLTVKCA----------ED------- 87 (132)
Q Consensus 29 ~~GwL~K--qg~~--~k~WkrRwFvL~~~~L~yyk~~~~~~~~~~~~g~I~L~~~~~v~~~----------~~------- 87 (132)
.||||.- .++. -+.|+|+|.||.+..|++|..+.+ +....|..+|||..-..|.+. .+
T Consensus 2 lEGwlsvP~~~~~~~k~gW~r~yvVv~~~Kl~lYd~e~~-~~~~~p~~vldl~~~fhv~~V~asDVi~a~~kDiP~IF~I 80 (112)
T cd01242 2 MEGWLSLPNRTNKSRKPGWKKQYVVVSSRKILFYNDEQD-KENSTPSMILDIDKLFHVRPVTQGDVYRADAKEIPKIFQI 80 (112)
T ss_pred cceeEEccCCCCccccCCceEEEEEEeCCEEEEEecCcc-ccCCCcEEEEEccceeeeecccHHHeeecCcccCCeEEEE
Confidence 5899864 3332 358999999999999999987752 123457778888653222110 01
Q ss_pred ----CceeEEEeccchhhhccchhhhhhhhh
Q 045778 88 ----GEYTMYSVADTEKEKGERINSIGRAIV 114 (132)
Q Consensus 88 ----~~r~~~f~A~s~~e~~~Wi~aI~~~i~ 114 (132)
..++.+|.|+|+.|++.|+.||.+.|.
T Consensus 81 ~~~~~~~~lllLA~s~~ek~kWV~~L~~~~~ 111 (112)
T cd01242 81 LYANEARDLLLLAPQTDEQNKWVSRLVKKIP 111 (112)
T ss_pred EeCCccceEEEEeCCchHHHHHHHHHHHhcc
Confidence 358899999999999999999987663
No 41
>cd01243 PH_MRCK MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain. MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain. MRCK consists of a serine/threonine kinase domain, a cysteine rich (C1) region, a PH domain and a p21 binding motif. It has been shown to promote cytoskeletal reorganization, which affects many biological processes. The MRCK PH domain is responsible for its targeting to cell to cell junctions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.80 E-value=6e-09 Score=72.54 Aligned_cols=82 Identities=18% Similarity=0.289 Sum_probs=57.8
Q ss_pred CCCCcch--hHhHhhhhcCCCeeeccccceeeeecccccccCCCCC----cceeec-ceEEEEec----------cC---
Q 045778 28 GEIGPAN--KARRLHQNLAPPLVHLKQGEHLWFKDSHNITRGSTPR----GFIPVG-TCLTVKCA----------ED--- 87 (132)
Q Consensus 28 ~~~GwL~--Kqg~~~k~WkrRwFvL~~~~L~yyk~~~~~~~~~~~~----g~I~L~-~~~~v~~~----------~~--- 87 (132)
..+|||. |.++..+.|+|+|.||.+.+|++|..+.+ ++..|. -+|+|+ .-.+|.+. .+
T Consensus 3 ~~EGwvkvP~~~~~krGW~r~~vVv~~~Kl~lYd~e~~--k~~~p~~~~~~vLdlrD~~fsV~~VtasDvi~a~~kDiP~ 80 (122)
T cd01243 3 AYEGHVKIPKPGGVKKGWQRALVVVCDFKLFLYDIAED--RASQPSVVISQVLDMRDPEFSVSSVLESDVIHASKKDIPC 80 (122)
T ss_pred cceeeEeccCCCCcccCceEEEEEEeCCEEEEEeCCcc--ccCCccCceeEEEEcCCCCEEEEEecHHHccccCcccCCe
Confidence 4689986 44555579999999999999999987752 233333 446773 21122110 00
Q ss_pred -------------CceeEEEeccchhhhccchhhhhh
Q 045778 88 -------------GEYTMYSVADTEKEKGERINSIGR 111 (132)
Q Consensus 88 -------------~~r~~~f~A~s~~e~~~Wi~aI~~ 111 (132)
+..+.+|.|+|+.|+++|+.||+.
T Consensus 81 If~I~~~~~~~~~~~~~~~~lA~s~~eK~kWV~aL~~ 117 (122)
T cd01243 81 IFRVTTSQISASSSKCSTLMLADTEEEKSKWVGALSE 117 (122)
T ss_pred EEEEEEecccCCCCccEEEEEeCCchHHHHHHHHHHH
Confidence 668899999999999999999965
No 42
>cd01259 PH_Apbb1ip Apbb1ip (Amyloid beta (A4) Precursor protein-Binding, family B, member 1 Interacting Protein) pleckstrin homology (PH) domain. Apbb1ip (Amyloid beta (A4) Precursor protein-Binding, family B, member 1 Interacting Protein) pleckstrin homology (PH) domain. Apbb1ip consists of a Ras-associated domain and a PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.74 E-value=2.7e-09 Score=73.43 Aligned_cols=80 Identities=14% Similarity=0.096 Sum_probs=54.4
Q ss_pred CCCcchhHhHhhhhcCCCeeeccccceeeeecccccccCCCCC---cceeecceE-------------------EEEecc
Q 045778 29 EIGPANKARRLHQNLAPPLVHLKQGEHLWFKDSHNITRGSTPR---GFIPVGTCL-------------------TVKCAE 86 (132)
Q Consensus 29 ~~GwL~Kqg~~~k~WkrRwFvL~~~~L~yyk~~~~~~~~~~~~---g~I~L~~~~-------------------~v~~~~ 86 (132)
.+|+|+-+....|.||||||+|+.+.|||+.... ...++ -..+++++. .+++..
T Consensus 2 ~~g~LylK~~gkKsWKk~~f~LR~SGLYy~~Kgk----sk~srdL~cl~~f~~~nvY~~~~~kKk~kAPTd~~F~~K~~~ 77 (114)
T cd01259 2 MEGPLYLKADGKKSWKKYYFVLRSSGLYYFPKEK----TKNTRDLACLNLLHGHNVYTGLGWRKKYKSPTDYCFGFKAVG 77 (114)
T ss_pred ccceEEEccCCCccceEEEEEEeCCeeEEccCCC----cCCHHHHHHHHhcccCcEEEEechhhccCCCCCceEEEeccc
Confidence 4899998877779999999999999999885543 12222 222333221 111111
Q ss_pred C----CceeEEEeccchhhhccchhhhhhh
Q 045778 87 D----GEYTMYSVADTEKEKGERINSIGRA 112 (132)
Q Consensus 87 ~----~~r~~~f~A~s~~e~~~Wi~aI~~~ 112 (132)
. .....+|||++++.+..||.||+-+
T Consensus 78 ~q~~~s~~ik~lCaeDe~t~~~W~ta~Ri~ 107 (114)
T cd01259 78 DQSKGSQSIKYLCAEDLPTLDRWLTAIRIA 107 (114)
T ss_pred cCcccchhheeeccCCHHHHHHHHHHHHHH
Confidence 1 2345689999999999999999754
No 43
>KOG3723 consensus PH domain protein Melted [Signal transduction mechanisms]
Probab=98.66 E-value=6.2e-09 Score=88.36 Aligned_cols=114 Identities=19% Similarity=0.228 Sum_probs=86.2
Q ss_pred ccccccCCCCCCCCCCcCceeeecCCCCCCcch-hHhH--hhhhcCCCeeeccccceeeeecccccccCCCCCcceeecc
Q 045778 2 ENVWRASSGQDPNPVDYKGIEFWSQPGEIGPAN-KARR--LHQNLAPPLVHLKQGEHLWFKDSHNITRGSTPRGFIPVGT 78 (132)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GwL~-Kqg~--~~k~WkrRwFvL~~~~L~yyk~~~~~~~~~~~~g~I~L~~ 78 (132)
.|.|---+|.+|-.+-+ -++--++|..+|-|. |+|. ++|+|+.|||.|.|..|.|-+.... .++. .-.|||..
T Consensus 711 ~N~W~Cf~CnnPeKa~y-Fvn~~gqp~iEGQLKEKKGrWRf~kRW~TrYFTLSgA~L~~~kg~s~--~dS~-~~~IDl~~ 786 (851)
T KOG3723|consen 711 ANAWQCFMCNNPEKATY-FVNQDGQPLIEGQLKEKKGRWRFIKRWKTRYFTLSGAQLLFQKGKSK--DDSD-DCPIDLSK 786 (851)
T ss_pred cCccceeecCChHHeee-eecCCCCchhcchhhhhccchhhhhhhccceEEecchhhhcccCCCC--CCCC-CCCccHHH
Confidence 37888888988877654 344457789999998 5674 6899999999999999999776641 1222 25689887
Q ss_pred eEEEEecc------C---------CceeEEEeccchhhhccchhhhhhhhhhhccc
Q 045778 79 CLTVKCAE------D---------GEYTMYSVADTEKEKGERINSIGRAIVQHSRS 119 (132)
Q Consensus 79 ~~~v~~~~------~---------~~r~~~f~A~s~~e~~~Wi~aI~~~i~~~~~~ 119 (132)
+.+|+... . .++++.|.|.+++..++|++.|+-+++...+.
T Consensus 787 IRSVk~v~~kr~~rslpKAFEIFTAD~T~ILKaKDeKNAEEWlqCL~IavAHa~~r 842 (851)
T KOG3723|consen 787 IRSVKAVAKKRRDRSLPKAFEIFTADKTYILKAKDEKNAEEWLQCLNIAVAHAKER 842 (851)
T ss_pred hhhHHHHHhhhhhcccchhhheeecCceEEeecccccCHHHHHHHHHHHHHHHHHH
Confidence 66554211 0 67789999999999999999999888765543
No 44
>KOG0248 consensus Cytoplasmic protein Max-1, contains PH, MyTH4 and FERM domains [Cytoskeleton]
Probab=98.53 E-value=8.6e-08 Score=82.77 Aligned_cols=86 Identities=15% Similarity=0.233 Sum_probs=71.0
Q ss_pred CCCCcchhHhHhhhhcCCCeeeccccceeeeecccccccCCCCCcceeecceEEEEeccC--------CceeEEEeccch
Q 045778 28 GEIGPANKARRLHQNLAPPLVHLKQGEHLWFKDSHNITRGSTPRGFIPVGTCLTVKCAED--------GEYTMYSVADTE 99 (132)
Q Consensus 28 ~~~GwL~Kqg~~~k~WkrRwFvL~~~~L~yyk~~~~~~~~~~~~g~I~L~~~~~v~~~~~--------~~r~~~f~A~s~ 99 (132)
.++||+.+.+...|.|+|||||++.+++.||+..++ +...|.+.|++..........- ...+++|-++++
T Consensus 250 ekSgy~~~~~s~~k~lkrr~~v~k~gqi~~y~~~~~--~~~~p~s~~d~~s~~~~~~~~~s~~fqli~~t~~~~~~~~s~ 327 (936)
T KOG0248|consen 250 EKSGYWTQLTSRIKSLKRRYVVFKNGQISFYRKHNN--RDEEPASKIDIRSVTKLEQQGAAYAFQLITSTDKMNFMTESE 327 (936)
T ss_pred hcccchhcchHHHHHHHhHheeeccceEEEEEcCCC--ccccccCcccccccceeeccchhHHhhhhhhceeEEEeccCh
Confidence 568999999999999999999999999999998863 5678999999976443322221 667899999999
Q ss_pred hhhccchhhhhhhhhh
Q 045778 100 KEKGERINSIGRAIVQ 115 (132)
Q Consensus 100 ~e~~~Wi~aI~~~i~~ 115 (132)
.-..+|++.|+.+|.-
T Consensus 328 ~lt~dw~~iL~~~iKv 343 (936)
T KOG0248|consen 328 RTTHDWVTILSAAIKA 343 (936)
T ss_pred hhhhhhHHHHHHHHHH
Confidence 9999999999887753
No 45
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=98.44 E-value=1.5e-07 Score=78.45 Aligned_cols=88 Identities=14% Similarity=0.082 Sum_probs=58.9
Q ss_pred cCCCCCCcchhHhHhhhhcCCCeeeccccceeeeecccccccCC--CCCcceeecceEEEEe-----ccC-------Cce
Q 045778 25 SQPGEIGPANKARRLHQNLAPPLVHLKQGEHLWFKDSHNITRGS--TPRGFIPVGTCLTVKC-----AED-------GEY 90 (132)
Q Consensus 25 ~~~~~~GwL~Kqg~~~k~WkrRwFvL~~~~L~yyk~~~~~~~~~--~~~g~I~L~~~~~v~~-----~~~-------~~r 90 (132)
.+....|||.|.+..++ |++|||.+.++.+...........+. .+.+..++..|..+.. .+. ..+
T Consensus 375 sDv~~~G~l~k~~~~~~-wk~ry~~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~v~pv~~~~~~~~~~~~~i~~~~~~ 453 (478)
T PTZ00267 375 SDVTHGGYLYKYSSDMR-WKKRYFYIGNGQLRISLSENPENDGVAPKSVNLETVNDVFPVPEVYSQKHPNQLVLWFNNGQ 453 (478)
T ss_pred CCcccceEEeccCCCcc-hhhheEEecCCceEEEeccccccCCCCCccccHHHhcccccccHHhcCCCCceEEEEecCCc
Confidence 57788999999987765 99999999988776543221001111 2223334445444321 111 566
Q ss_pred eEEEeccchhhhccchhhhhhhh
Q 045778 91 TMYSVADTEKEKGERINSIGRAI 113 (132)
Q Consensus 91 ~~~f~A~s~~e~~~Wi~aI~~~i 113 (132)
.++|.|+|++++++||.+|+.++
T Consensus 454 ~~~~~~~~~~~~~~W~~~~~~~~ 476 (478)
T PTZ00267 454 KIIAYAKTAEDRDQWISKFQRAC 476 (478)
T ss_pred EEEEecCChHHHHHHHHHHHHHh
Confidence 78889999999999999999875
No 46
>KOG2059 consensus Ras GTPase-activating protein [Signal transduction mechanisms]
Probab=98.41 E-value=7.1e-08 Score=83.35 Aligned_cols=91 Identities=16% Similarity=0.153 Sum_probs=67.5
Q ss_pred cCCCCCCc-chhH--h--H-hhhhcCCCeeeccccceeeeecccccccCCCCCcceeecceEEEEeccC-----------
Q 045778 25 SQPGEIGP-ANKA--R--R-LHQNLAPPLVHLKQGEHLWFKDSHNITRGSTPRGFIPVGTCLTVKCAED----------- 87 (132)
Q Consensus 25 ~~~~~~Gw-L~Kq--g--~-~~k~WkrRwFvL~~~~L~yyk~~~~~~~~~~~~g~I~L~~~~~v~~~~~----------- 87 (132)
..++++|. |.|+ | . ..++.|+|||.|++..|.|.|+++ ..|.+.|+|+.+..|...++
T Consensus 562 ~p~v~k~glm~kr~~gr~~~~~~~FKKryf~LT~~~Ls~~Ksp~-----~q~~~~Ipl~nI~avEklee~sF~~knv~qV 636 (800)
T KOG2059|consen 562 EPVVLKEGLMIKRAQGRGRFGKKNFKKRYFRLTTEELSYAKSPG-----KQPIYTIPLSNIRAVEKLEEKSFKMKNVFQV 636 (800)
T ss_pred CCceecccceEeccccccchhhhhhhheEEEeccceeEEecCCc-----cCcccceeHHHHHHHHHhhhhccCCCceEEE
Confidence 34455554 4453 2 2 237899999999999999999996 68999999987544332222
Q ss_pred --CceeEEEeccchhhhccchhhhhhhhhhhcccc
Q 045778 88 --GEYTMYSVADTEKEKGERINSIGRAIVQHSRSV 120 (132)
Q Consensus 88 --~~r~~~f~A~s~~e~~~Wi~aI~~~i~~~~~~~ 120 (132)
+.|+.||+|.+-.|.+.|+++|.+........+
T Consensus 637 V~~drtly~Q~~n~vEandWldaL~kvs~~N~~rL 671 (800)
T KOG2059|consen 637 VHTDRTLYVQAKNCVEANDWLDALRKVSCCNQNRL 671 (800)
T ss_pred EecCcceeEecCCchHHHHHHHHHHHHhccCcchh
Confidence 568999999999999999999977655444333
No 47
>cd01261 PH_SOS Son of Sevenless (SOS) Pleckstrin homology (PH) domain. Son of Sevenless (SOS) Pleckstrin homology (PH) domain. SOS is a Ras guanine nucleotide exchange factor. It has a RhoGEF (DbH) domain, a PH domain, and a RasGEF domain. The SOS PH domain can bind to inositol 1,4,5-triphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.39 E-value=5e-07 Score=62.51 Aligned_cols=87 Identities=10% Similarity=0.022 Sum_probs=62.5
Q ss_pred CCCCcchhHhHhhhhcCCCeeeccccceeeeeccccccc--------CCCCCcceeecceEEEEecc-----C-------
Q 045778 28 GEIGPANKARRLHQNLAPPLVHLKQGEHLWFKDSHNITR--------GSTPRGFIPVGTCLTVKCAE-----D------- 87 (132)
Q Consensus 28 ~~~GwL~Kqg~~~k~WkrRwFvL~~~~L~yyk~~~~~~~--------~~~~~g~I~L~~~~~v~~~~-----~------- 87 (132)
+++|-|.|-+...+..+.|+|.|=++.|.|-+.... ++ .-.-++.|+|..+.+..... +
T Consensus 5 I~EG~L~ki~~~~~~~q~R~~FLFd~~Li~CK~~~~-~~~~~g~~~~~y~~k~~~~l~~~~V~d~~d~~~~knaF~I~~~ 83 (112)
T cd01261 5 IMEGTLTRVGPSKKAKHERHVFLFDGLMVLCKSNHG-QPRLPGASSAEYRLKEKFFMRKVDINDKPDSSEYKNAFEIILK 83 (112)
T ss_pred cccCcEEEEecccCCcceEEEEEecCeEEEEEeccC-cccccccccceEEEEEEEeeeeeEEEEcCCCcccCceEEEEcC
Confidence 578999987765578999999999999998875431 00 01224557777765432211 1
Q ss_pred CceeEEEeccchhhhccchhhhhhhhhh
Q 045778 88 GEYTMYSVADTEKEKGERINSIGRAIVQ 115 (132)
Q Consensus 88 ~~r~~~f~A~s~~e~~~Wi~aI~~~i~~ 115 (132)
..+.|.|+|.|++|.++||++|..++.+
T Consensus 84 ~~~s~~l~Akt~eeK~~Wm~~l~~~~~~ 111 (112)
T cd01261 84 DGNSVIFSAKNAEEKNNWMAALISVQTK 111 (112)
T ss_pred CCCEEEEEECCHHHHHHHHHHHHHHhcC
Confidence 3578999999999999999999887653
No 48
>KOG1739 consensus Serine/threonine protein kinase GPBP [Signal transduction mechanisms; Defense mechanisms]
Probab=98.35 E-value=2.3e-07 Score=77.55 Aligned_cols=82 Identities=18% Similarity=0.233 Sum_probs=67.1
Q ss_pred CCCCCcchhHhHhhhhcCCCeeeccccceeeeecccccccCCCCCcceeecceEEEEecc-C--------CceeEEEecc
Q 045778 27 PGEIGPANKARRLHQNLAPPLVHLKQGEHLWFKDSHNITRGSTPRGFIPVGTCLTVKCAE-D--------GEYTMYSVAD 97 (132)
Q Consensus 27 ~~~~GwL~Kqg~~~k~WkrRwFvL~~~~L~yyk~~~~~~~~~~~~g~I~L~~~~~v~~~~-~--------~~r~~~f~A~ 97 (132)
....|+|.|.-+.+..|+.|||+|+.+.|.||+++. .....++|.|.|....+ ...+ | +....++.|.
T Consensus 24 ~e~~G~lskwtnyi~gwqdRyv~lk~g~Lsyykse~--E~~hGcRgsi~l~ka~i-~ahEfDe~rfdIsvn~nv~~lra~ 100 (611)
T KOG1739|consen 24 VERCGVLSKWTNYIHGWQDRYVVLKNGALSYYKSED--ETEHGCRGSICLSKAVI-TAHEFDECRFDISVNDNVWYLRAQ 100 (611)
T ss_pred hhhcceeeeeecccccccceEEEEcccchhhhhhhh--hhhcccceeeEeccCCc-ccccchhheeeeEeccceeeehhc
Confidence 356899999999999999999999999999999885 34578999999986532 2221 1 6677899999
Q ss_pred chhhhccchhhhhh
Q 045778 98 TEKEKGERINSIGR 111 (132)
Q Consensus 98 s~~e~~~Wi~aI~~ 111 (132)
+...++.|+.+|+.
T Consensus 101 ~~~hr~~w~d~L~w 114 (611)
T KOG1739|consen 101 DPDHRQQWIDALEW 114 (611)
T ss_pred CcHHHHHHHHHHHH
Confidence 99999999999965
No 49
>cd01239 PH_PKD Protein kinase D (PKD/PKCmu) pleckstrin homology (PH) domain. Protein kinase D (PKD/PKCmu) pleckstrin homology (PH) domain. PKD consists of 2 C1 domains, followed by a PH domain and a kinase domain. While the PKD PH domain has not been shown to bind phosphorylated inositol lipids and is not required for membrane translocation, it is required for nuclear export. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.32 E-value=4.1e-07 Score=62.93 Aligned_cols=54 Identities=15% Similarity=0.081 Sum_probs=44.7
Q ss_pred CCCCcchhHhHhhhhcCCCeeeccccceeeeecccccccCCCCCcceeecceEEEEec
Q 045778 28 GEIGPANKARRLHQNLAPPLVHLKQGEHLWFKDSHNITRGSTPRGFIPVGTCLTVKCA 85 (132)
Q Consensus 28 ~~~GwL~Kqg~~~k~WkrRwFvL~~~~L~yyk~~~~~~~~~~~~g~I~L~~~~~v~~~ 85 (132)
.+||||.--...=+.|||+|++|....|.+|.++. ++++-..|+|+.+..|+.+
T Consensus 1 lkEGWmVHyT~~d~~rKRhYWrLDsK~Itlf~~e~----~skyyKeIPLsEIl~V~~~ 54 (117)
T cd01239 1 LKEGWMVHYTSSDNRRKKHYWRLDSKAITLYQEES----GSRYYKEIPLAEILSVSSN 54 (117)
T ss_pred CccceEEEEecCccceeeeEEEecCCeEEEEEcCC----CCeeeEEeehHHheEEecc
Confidence 36899876554448899999999999999999984 5789999999998777643
No 50
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=98.30 E-value=2.4e-07 Score=82.02 Aligned_cols=89 Identities=13% Similarity=0.107 Sum_probs=68.5
Q ss_pred cCCCCCCcchhHhH-hhhhcCCCeeeccccceeeeecccccccCCCCCcceeecceEEEEeccC------------Ccee
Q 045778 25 SQPGEIGPANKARR-LHQNLAPPLVHLKQGEHLWFKDSHNITRGSTPRGFIPVGTCLTVKCAED------------GEYT 91 (132)
Q Consensus 25 ~~~~~~GwL~Kqg~-~~k~WkrRwFvL~~~~L~yyk~~~~~~~~~~~~g~I~L~~~~~v~~~~~------------~~r~ 91 (132)
.+..+.|+|+|+.. .++.|.||||-.+++.+.|+.... .......++|..|. |+..++ +.++
T Consensus 272 ~~~~~~~~l~~k~~~~~~tw~r~~f~~q~~~l~~~~r~~----~~~~~~~~dL~~cs-vk~~~~~~drr~CF~iiS~tks 346 (785)
T KOG0521|consen 272 LGYRMEGYLRKKASNASKTWKRRWFSIQDGQLGYQHRGA----DAENVLIEDLRTCS-VKPDAEQRDRRFCFEIISPTKS 346 (785)
T ss_pred chhhhhhhhhhhcccchhhHHhhhhhhhccccccccccc----cccccccccchhcc-ccCCcccccceeeEEEecCCcc
Confidence 44567899998854 589999999999999999887763 12224556777774 333322 8899
Q ss_pred EEEeccchhhhccchhhhhhhhhhhcc
Q 045778 92 MYSVADTEKEKGERINSIGRAIVQHSR 118 (132)
Q Consensus 92 ~~f~A~s~~e~~~Wi~aI~~~i~~~~~ 118 (132)
|.|+|+++.+.++||.+|+.++...-.
T Consensus 347 ~~lQAes~~d~~~Wi~~i~nsi~s~l~ 373 (785)
T KOG0521|consen 347 YLLQAESEKDCQDWISALQNSILSALN 373 (785)
T ss_pred eEEecCchhHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999998876543
No 51
>cd01249 PH_oligophrenin Oligophrenin Pleckstrin homology (PH) domain. Oligophrenin Pleckstrin homology (PH) domain. Oligophrenin is composed of a PH domain, a rhoGAP domain and a proline rich region. Closely related proteins have a C-terminal SH3 domain. PH domains a share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=98.17 E-value=7.8e-07 Score=60.70 Aligned_cols=82 Identities=10% Similarity=0.124 Sum_probs=48.2
Q ss_pred CCCcchhHhH--hhhhcCCCeeeccc-ccee----eeecc-cccccCCCCCcceeecceEEEEeccC-----------Cc
Q 045778 29 EIGPANKARR--LHQNLAPPLVHLKQ-GEHL----WFKDS-HNITRGSTPRGFIPVGTCLTVKCAED-----------GE 89 (132)
Q Consensus 29 ~~GwL~Kqg~--~~k~WkrRwFvL~~-~~L~----yyk~~-~~~~~~~~~~g~I~L~~~~~v~~~~~-----------~~ 89 (132)
++|||+.|.. ..-+|.+.||..++ +.++ +.... ++....-...-.|.|..|. +...+. +.
T Consensus 1 k~GYLy~~~k~~~~~~Wvk~y~~~~~~~~~f~m~~~~q~s~~~~~g~v~~~e~~~l~sc~-~r~~~~~dRRFCFei~~~~ 79 (104)
T cd01249 1 KEGYLYMQEKSKFGGSWTKYYCTYSKETRIFTMVPFNQKTKTDMKGAVAQDETLTLKSCS-RRKTESIDKRFCFDVEVEE 79 (104)
T ss_pred CCceEEEEcCCCCCCeEEEEEEEEEcCCcEEEEEecccccccccCcccccceEEeeeecc-ccccCCccceeeEeeeecC
Confidence 5899998742 33489999998875 4443 22211 1000001111235566663 332221 22
Q ss_pred --eeEEEeccchhhhccchhhhhh
Q 045778 90 --YTMYSVADTEKEKGERINSIGR 111 (132)
Q Consensus 90 --r~~~f~A~s~~e~~~Wi~aI~~ 111 (132)
.++.|+|+|+.++..||.||..
T Consensus 80 ~~~~~~lQA~Se~~~~~Wi~A~dg 103 (104)
T cd01249 80 KPGVITMQALSEKDRRLWIEAMDG 103 (104)
T ss_pred CCCeEEEEecCHHHHHHHHHhhcC
Confidence 4789999999999999999853
No 52
>cd01262 PH_PDK1 3-Phosphoinositide dependent protein kinase 1 (PDK1) pleckstrin homology (PH) domain. 3-Phosphoinositide dependent protein kinase 1 (PDK1) pleckstrin homology (PH) domain. PDK1 contains an N-terminal serine/threonine kinase domain followed by a PH domain. Following binding of the PH domain to PtdIns(3,4,5)P3 and PtdIns(3,4)P2, PDK1 activates kinases such as Akt (PKB). PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.14 E-value=3.6e-06 Score=55.85 Aligned_cols=78 Identities=19% Similarity=0.193 Sum_probs=57.5
Q ss_pred CCCCcchhHhHhhhhcCCCeeeccccceeeeecccccccCCCCCcceeecc-eEEEEeccC-------CceeEEEeccch
Q 045778 28 GEIGPANKARRLHQNLAPPLVHLKQGEHLWFKDSHNITRGSTPRGFIPVGT-CLTVKCAED-------GEYTMYSVADTE 99 (132)
Q Consensus 28 ~~~GwL~Kqg~~~k~WkrRwFvL~~~~L~yyk~~~~~~~~~~~~g~I~L~~-~~~v~~~~~-------~~r~~~f~A~s~ 99 (132)
.+.|.+.|+.+. .+|+|=++|.+.--++|-|+. ....+|.|+++. +..++.... +.|+|+|. |..
T Consensus 2 l~~g~v~Kr~gl--f~kkR~LiLTd~PrL~yvdp~----~~~~KgeIp~s~~~l~v~~~~~~~F~I~Tp~rty~le-D~~ 74 (89)
T cd01262 2 LKIGAVKKRKGL--FAKKRQLILTNGPRLIYVDPV----KKVVKGEIPWSDVELRVEVKNSSHFFVHTPNKVYSFE-DPK 74 (89)
T ss_pred ceeeeeeehhcc--ccceeeEEEecCceEEEEcCC----cCeEEeEecccccceEEEEecCccEEEECCCceEEEE-CCC
Confidence 567888888765 479999999987555555553 256789999988 544433221 88999994 666
Q ss_pred hhhccchhhhhhh
Q 045778 100 KEKGERINSIGRA 112 (132)
Q Consensus 100 ~e~~~Wi~aI~~~ 112 (132)
.....|+++|+.+
T Consensus 75 ~~a~~W~~~I~~~ 87 (89)
T cd01262 75 GRASQWKKAIEDL 87 (89)
T ss_pred CCHHHHHHHHHHH
Confidence 8899999999765
No 53
>KOG3751 consensus Growth factor receptor-bound proteins (GRB7, GRB10, GRB14) [Signal transduction mechanisms]
Probab=98.13 E-value=1e-06 Score=74.25 Aligned_cols=84 Identities=12% Similarity=0.101 Sum_probs=57.9
Q ss_pred cCCCCCCcchhHhHhhhhcCCCeeeccccceeeeecccccccCCCCCc--c-eeecc-------------------eEEE
Q 045778 25 SQPGEIGPANKARRLHQNLAPPLVHLKQGEHLWFKDSHNITRGSTPRG--F-IPVGT-------------------CLTV 82 (132)
Q Consensus 25 ~~~~~~GwL~Kqg~~~k~WkrRwFvL~~~~L~yyk~~~~~~~~~~~~g--~-I~L~~-------------------~~~v 82 (132)
+.|.++|+|+-++...|.|||-||||+...|||+...+ ...|+- . -++.+ +..+
T Consensus 315 ~~pei~GfL~~K~dgkKsWKk~yf~LR~SGLYys~K~t----sk~~r~Lq~l~~~~~snVYt~i~~rKkyksPTd~~f~~ 390 (622)
T KOG3751|consen 315 SPPEIQGFLYLKEDGKKSWKKHYFVLRRSGLYYSTKGT----SKEPRHLQCLADLHSSNVYTGIGGRKKYKSPTDYGFCI 390 (622)
T ss_pred CCccccceeeecccccccceeEEEEEecCcceEccCCC----CCCchhhHHHHhcccCceEEeecchhccCCCCCceEEe
Confidence 55889999999988889999999999999999986553 123321 1 12211 1112
Q ss_pred EeccC--C-ceeEEEeccchhhhccchhhhhhh
Q 045778 83 KCAED--G-EYTMYSVADTEKEKGERINSIGRA 112 (132)
Q Consensus 83 ~~~~~--~-~r~~~f~A~s~~e~~~Wi~aI~~~ 112 (132)
+.... . .---+|||+++..+..|+.||+-+
T Consensus 391 K~~~~~~~~r~lk~lCAEDe~t~~~WltAiRl~ 423 (622)
T KOG3751|consen 391 KPNKLRNKRRFLKMLCAEDEQTRTCWLTAIRLL 423 (622)
T ss_pred eeccccCcccceeeeecccchhHHHHHHHHHHH
Confidence 22211 2 223488999999999999999654
No 54
>cd01240 PH_beta-ARK Beta adrenergic receptor kinase 1(beta ARK1)(GRK2) pleckstrin homology (PH) domain. Beta adrenergic receptor kinase 1(beta ARK1)(GRK2) pleckstrin homology (PH) domain. Beta ARK1 is a G protein-coupled receptor kinase (GRK). It phosphorylates activated G-protein coupled receptors leading to the release of the previously bound heterotrimeric G protein agonist and thus signal termination. It consists of a domain found in regulators of G-protein signaling (RGS)(RH), a serine/threonine kinase domain and a C-terminal PH domain. The Beta-Ark 1 PH domain has an extended C-terminal helix, which mediates interactions with G beta gamma subunits. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or
Probab=98.12 E-value=8.5e-07 Score=60.82 Aligned_cols=85 Identities=13% Similarity=0.051 Sum_probs=60.9
Q ss_pred CCCCCCcchhHhH-hhhhcCCCeeeccccceeeeecccccccCCCCCcceeecceEEEE------eccC-------Ccee
Q 045778 26 QPGEIGPANKARR-LHQNLAPPLVHLKQGEHLWFKDSHNITRGSTPRGFIPVGTCLTVK------CAED-------GEYT 91 (132)
Q Consensus 26 ~~~~~GwL~Kqg~-~~k~WkrRwFvL~~~~L~yyk~~~~~~~~~~~~g~I~L~~~~~v~------~~~~-------~~r~ 91 (132)
|+...||+.|-|+ +...|++|||.|-.++|-+|..+. ...-..|.+..+..|. ..+. +++.
T Consensus 2 DcIvhGyi~KLGGPFls~WQ~Ry~~LfPNRLE~~~~~~-----~~~~eLi~M~~i~~V~~e~~~iK~~~CI~ik~k~~~k 76 (116)
T cd01240 2 DCIVHGYIKKLGGPFLSQWQTRYFKLYPNRLELYGESE-----ANKPELITMDQIEDVSVEFQQIKEENCILLKIRDEKK 76 (116)
T ss_pred ceEEeeehhhhCCHHHHHHHHHHheeCcceeeeccccc-----ccCCcEEEeehhhhcchhheeeccCceEEEEEcCCce
Confidence 5677999999875 679999999999999999875543 2223344443322111 0111 6788
Q ss_pred EEEeccchhhhccchhhhhhhhhh
Q 045778 92 MYSVADTEKEKGERINSIGRAIVQ 115 (132)
Q Consensus 92 ~~f~A~s~~e~~~Wi~aI~~~i~~ 115 (132)
+++.++++.+..+|...|+.+-..
T Consensus 77 ~vlt~~d~i~l~qW~~elr~a~r~ 100 (116)
T cd01240 77 IVLTNSDEIELKQWKKELRDAHRE 100 (116)
T ss_pred EEEecCCcHHHHHHHHHHHHHHHH
Confidence 999999999999999999876543
No 55
>PLN00188 enhanced disease resistance protein (EDR2); Provisional
Probab=98.06 E-value=2.7e-06 Score=74.18 Aligned_cols=89 Identities=13% Similarity=0.000 Sum_probs=62.4
Q ss_pred CCCCCCcchhHhH---hhhhcCCCeeeccccceeeeecccccccCCCCCcceeecceEEEEec-----------------
Q 045778 26 QPGEIGPANKARR---LHQNLAPPLVHLKQGEHLWFKDSHNITRGSTPRGFIPVGTCLTVKCA----------------- 85 (132)
Q Consensus 26 ~~~~~GwL~Kqg~---~~k~WkrRwFvL~~~~L~yyk~~~~~~~~~~~~g~I~L~~~~~v~~~----------------- 85 (132)
++.++|||+--|. ....-++|||||+|..|.|||..-. ....|.....+.+++-|...
T Consensus 3 ~~~~eGW~y~~g~~kig~~~~~~Ry~vl~~~~~~~yK~~P~--~~~~pirs~~id~~~rVed~Gr~~~~g~~~yvl~~Yn 80 (719)
T PLN00188 3 KVVYEGWMVRYGRRKIGRSYIHMRYFVLESRLLAYYKKKPQ--DNQVPIKTLLIDGNCRVEDRGLKTHHGHMVYVLSVYN 80 (719)
T ss_pred cceEeeEEEEEcccccccccceeEEEEEecchhhhcccCCc--cccccceeeccCCCceEeecCceEEcCceEEEEEEec
Confidence 4578999987653 2456899999999999999998631 11344444444443333211
Q ss_pred -cCCceeEEEeccchhhhccchhhhhhhhhhh
Q 045778 86 -EDGEYTMYSVADTEKEKGERINSIGRAIVQH 116 (132)
Q Consensus 86 -~~~~r~~~f~A~s~~e~~~Wi~aI~~~i~~~ 116 (132)
.+..+...|.|-|.+|..+|+.||+.++.++
T Consensus 81 ~~~~~~~~~~~a~~~eea~~W~~a~~~a~~q~ 112 (719)
T PLN00188 81 KKEKYHRITMAAFNIQEALIWKEKIESVIDQH 112 (719)
T ss_pred CCCccccEEEecCCHHHHHHHHHHHHHHHhhh
Confidence 0145566799999999999999999999875
No 56
>KOG1117 consensus Rho- and Arf-GTPase activating protein ARAP3 [Signal transduction mechanisms; Cytoskeleton]
Probab=98.04 E-value=3.3e-06 Score=74.74 Aligned_cols=90 Identities=17% Similarity=0.135 Sum_probs=73.0
Q ss_pred eecCCCCCCcchhHhH-hhhhcCCCeeeccccceeeeecccccccCCCCCcceeecceEEEEeccC-------CceeEEE
Q 045778 23 FWSQPGEIGPANKARR-LHQNLAPPLVHLKQGEHLWFKDSHNITRGSTPRGFIPVGTCLTVKCAED-------GEYTMYS 94 (132)
Q Consensus 23 ~~~~~~~~GwL~Kqg~-~~k~WkrRwFvL~~~~L~yyk~~~~~~~~~~~~g~I~L~~~~~v~~~~~-------~~r~~~f 94 (132)
.+..+.+.|||.|-.. ..--.++||..+.+..+.||.++. +..+.|.|+++....|....+ +.|+|.|
T Consensus 83 ~isp~~~~gwldk~~pqg~~~~qkr~vkf~~~s~~yf~~~k----~py~k~~i~va~is~v~~~gd~kfevitn~r~fvf 158 (1186)
T KOG1117|consen 83 PISPVIKSGWLDKLSPQGEYPFQKRWVKFDGSSLEYFLSPK----DPYSKGPIPVAAISAVRNFGDNKFEVITNQRTFVF 158 (1186)
T ss_pred ccCchhhcchhhccCcCcccccCccceecCCCCccccCCCC----CCCCCCceeeehhhhhhhccCceEEEEecceEEEE
Confidence 3566889999999532 234589999999999999999884 578899999987655543333 8899999
Q ss_pred eccchhhhccchhhhhhhhhhh
Q 045778 95 VADTEKEKGERINSIGRAIVQH 116 (132)
Q Consensus 95 ~A~s~~e~~~Wi~aI~~~i~~~ 116 (132)
.++++.++..|+..++.++...
T Consensus 159 r~e~~~~r~~w~s~l~s~~~~Q 180 (1186)
T KOG1117|consen 159 RQESEGERFIWVSPLQSALKEQ 180 (1186)
T ss_pred ecCCcccceeeechhhhcchhh
Confidence 9999999999999999987654
No 57
>cd01258 PH_syntrophin Syntrophin pleckstrin homology (PH) domain. Syntrophin pleckstrin homology (PH) domain. Syntrophins are peripheral membrane proteins, which associate with the Duchenne muscular dystrophy protein dystrophin and other proteins to form the dystrophin glycoprotein complex (DGC). There are five syntrophin isoforms, alpha1, beta1, beta2, gamma1, and gamma2. They all contain two PH domains, with the N-teminal PH domain interupted by a PDZ domain. The N-terminal PH domain of alpha1syntrophin binds phosphatidylinositol 4,5-bisphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=97.92 E-value=5.8e-06 Score=56.85 Aligned_cols=82 Identities=22% Similarity=0.216 Sum_probs=53.3
Q ss_pred CCcchhH--h--HhhhhcCCCeeeccccceeeeeccccc-ccCCCCCcceeec--ceEEEE-----e---ccC-------
Q 045778 30 IGPANKA--R--RLHQNLAPPLVHLKQGEHLWFKDSHNI-TRGSTPRGFIPVG--TCLTVK-----C---AED------- 87 (132)
Q Consensus 30 ~GwL~Kq--g--~~~k~WkrRwFvL~~~~L~yyk~~~~~-~~~~~~~g~I~L~--~~~~v~-----~---~~~------- 87 (132)
-|||..| | ...++||+||++|+|..|+.|.+.--. ..=..|....+|- .+-.++ . ..+
T Consensus 2 mGW~~E~~~~~~~~~~~wrP~F~aL~~~dl~ly~s~P~s~e~w~~p~~~y~L~~~atrvv~~~~~~~~~~~~~~~F~irt 81 (108)
T cd01258 2 IGWVNEQLSGDDESSQRWRPRFLALKGSEFLFFETPPLSVEDWSRPLYVYKLYDVATRLVKNSSTRRLNDQRDNCFLIRT 81 (108)
T ss_pred ceecccccCCCCccccccceEEEEEcCCcEEEEeCCCCCHHHHhChhhhChhHHhhhheeccCCccCcCCCCceEEEEEc
Confidence 4888876 2 245899999999999999999877310 0112333333332 000111 0 000
Q ss_pred -Cc-eeEEEeccchhhhccchhhhhh
Q 045778 88 -GE-YTMYSVADTEKEKGERINSIGR 111 (132)
Q Consensus 88 -~~-r~~~f~A~s~~e~~~Wi~aI~~ 111 (132)
.. .+++|.+++..|+..|.+||+.
T Consensus 82 g~~vesh~fsVEt~~dL~~W~raiv~ 107 (108)
T cd01258 82 GTQVENHYLRVETHRDLASWERALVR 107 (108)
T ss_pred CCceeeEEEEecCHHHHHHHHHHHhc
Confidence 34 7999999999999999999964
No 58
>KOG3543 consensus Ca2+-dependent activator protein [Signal transduction mechanisms]
Probab=97.58 E-value=4.4e-05 Score=66.24 Aligned_cols=89 Identities=16% Similarity=0.176 Sum_probs=66.1
Q ss_pred CCCCCcchhHhH-hhhhcCCCeeeccccc-----eeeeecccccccCCCCCcceeecceEEEEeccC-------------
Q 045778 27 PGEIGPANKARR-LHQNLAPPLVHLKQGE-----HLWFKDSHNITRGSTPRGFIPVGTCLTVKCAED------------- 87 (132)
Q Consensus 27 ~~~~GwL~Kqg~-~~k~WkrRwFvL~~~~-----L~yyk~~~~~~~~~~~~g~I~L~~~~~v~~~~~------------- 87 (132)
-...|||.--|. ..|.||+|||+|-.-. ++-|+.+. ..|...|.|.+.. |.-.+.
T Consensus 464 mkhsgylyaig~nvwkrwkkrffvlvqvsqytfamcsyrekk-----aepqel~qldgyt-vdytdp~pglqgg~~ffna 537 (1218)
T KOG3543|consen 464 MKHSGYLYAIGRNVWKRWKKRFFVLVQVSQYTFAMCSYREKK-----AEPQELIQLDGYT-VDYTDPSPGLQGGKHFFNA 537 (1218)
T ss_pred cccceeehhhhhHHHHHhHhhEEEEEEhhhhhhHhhhhhhcc-----cChHHHhhccCee-eccCCCCCccccchHHHHH
Confidence 356899999885 5799999999997654 34455543 6788999998864 321111
Q ss_pred --CceeEEEeccchhhhccchhhhhhhhhhhccccc
Q 045778 88 --GEYTMYSVADTEKEKGERINSIGRAIVQHSRSVT 121 (132)
Q Consensus 88 --~~r~~~f~A~s~~e~~~Wi~aI~~~i~~~~~~~~ 121 (132)
.+.+..|+.|++.++.-|++|+-++..+...++.
T Consensus 538 vkegdtvifasddeqdr~lwvqamyratgqsykpvp 573 (1218)
T KOG3543|consen 538 VKEGDTVIFASDDEQDRHLWVQAMYRATGQSYKPVP 573 (1218)
T ss_pred hccCceEEeccCchhhhhHHHHHHHHhhCCcCCCCC
Confidence 5668899999999999999999877766555443
No 59
>PF15406 PH_6: Pleckstrin homology domain
Probab=97.52 E-value=0.00011 Score=50.49 Aligned_cols=62 Identities=11% Similarity=0.154 Sum_probs=44.0
Q ss_pred eeeccccceeeeecccccccCCCCCcceeecceEEEEecc-C------CceeEEEeccchhhhccchhhhhh
Q 045778 47 LVHLKQGEHLWFKDSHNITRGSTPRGFIPVGTCLTVKCAE-D------GEYTMYSVADTEKEKGERINSIGR 111 (132)
Q Consensus 47 wFvL~~~~L~yyk~~~~~~~~~~~~g~I~L~~~~~v~~~~-~------~~r~~~f~A~s~~e~~~Wi~aI~~ 111 (132)
|-.=+|..|++|.... ....|.|+|+|.....+...- + ++..+.|.|.|..||+.||.+|..
T Consensus 43 wAsqTGKGLLF~~K~~---dka~P~GiinLadase~~~~g~~kF~f~~~G~khtF~A~s~aERD~Wv~~lk~ 111 (112)
T PF15406_consen 43 WASQTGKGLLFFSKAE---DKASPSGIINLADASEPEKDGSNKFHFKIKGHKHTFEAASAAERDNWVAQLKA 111 (112)
T ss_pred hhhccCceEEEEeccc---cccCCcceEehhhccccccCCCceEEEEeCCceeeeecCCHHHhccHHHHhhc
Confidence 4444666677775432 236899999998764332211 1 778889999999999999999853
No 60
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=97.44 E-value=4.1e-05 Score=64.48 Aligned_cols=27 Identities=11% Similarity=0.136 Sum_probs=25.1
Q ss_pred CceeEEEeccchhhhccchhhhhhhhh
Q 045778 88 GEYTMYSVADTEKEKGERINSIGRAIV 114 (132)
Q Consensus 88 ~~r~~~f~A~s~~e~~~Wi~aI~~~i~ 114 (132)
+++.+.|.|.++.+|+.||.+||.++.
T Consensus 464 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 490 (496)
T PTZ00283 464 TGRRLLFQARSDPERDAWMQKIQSVLG 490 (496)
T ss_pred CCcEEEEecCCchhHHHHHHHHHHhcC
Confidence 889999999999999999999998764
No 61
>KOG1737 consensus Oxysterol-binding protein [Lipid transport and metabolism]
Probab=97.39 E-value=7.6e-05 Score=66.15 Aligned_cols=84 Identities=13% Similarity=0.024 Sum_probs=64.9
Q ss_pred CCCCCcchhHhHhhhhcCCCeeeccccceeeeecccccccCCCCCcceeecceEEEEe-----ccC--CceeEEEeccch
Q 045778 27 PGEIGPANKARRLHQNLAPPLVHLKQGEHLWFKDSHNITRGSTPRGFIPVGTCLTVKC-----AED--GEYTMYSVADTE 99 (132)
Q Consensus 27 ~~~~GwL~Kqg~~~k~WkrRwFvL~~~~L~yyk~~~~~~~~~~~~g~I~L~~~~~v~~-----~~~--~~r~~~f~A~s~ 99 (132)
...+|||.|.....+.|++|||+|.++.|.||++... ....+.|.|++....+-.. +.. +.+.++..+.+.
T Consensus 77 ~~~~g~l~k~~n~~~~~~~r~f~l~~g~ls~~~~~~~--~~~~~~~~~~~~~a~i~~~~~~~~~~~~~~~q~~~~~~~~~ 154 (799)
T KOG1737|consen 77 ASLEGILLKWRNYSKGPSSRWFVLSGGLLSYYFDNSF--SKTTCGGGINLVTAWIQNGERMDICSVDGSCQIYLVELSKK 154 (799)
T ss_pred ccccceeeccccccCCcccceEEecCcceeeeccCCc--cccCCCCcccccccccccCCCcccchhhcccchhhhhhhHH
Confidence 3468999999999999999999999888889988763 3468888998854321111 011 357788899999
Q ss_pred hhhccchhhhhhh
Q 045778 100 KEKGERINSIGRA 112 (132)
Q Consensus 100 ~e~~~Wi~aI~~~ 112 (132)
.+++.|+.++..+
T Consensus 155 ~~~~~~~~~~~l~ 167 (799)
T KOG1737|consen 155 LQRQGWLHALELA 167 (799)
T ss_pred Hhhcchhhhhhhc
Confidence 9999999999776
No 62
>PLN02866 phospholipase D
Probab=97.39 E-value=0.00018 Score=65.36 Aligned_cols=87 Identities=14% Similarity=0.124 Sum_probs=61.4
Q ss_pred cCCCCCCcchhH------h--H---hh---------hhcCCCeeeccccceeeeecccccccCCCCCcceeecc------
Q 045778 25 SQPGEIGPANKA------R--R---LH---------QNLAPPLVHLKQGEHLWFKDSHNITRGSTPRGFIPVGT------ 78 (132)
Q Consensus 25 ~~~~~~GwL~Kq------g--~---~~---------k~WkrRwFvL~~~~L~yyk~~~~~~~~~~~~g~I~L~~------ 78 (132)
..-.+|||+.|+ | + .. -+|.+|||||+.+.|.|..++. +.++.-+|-.+.
T Consensus 180 g~K~~Eg~v~~r~~~~~~g~~~~~~~~~~~~~~~~~~~w~k~w~v~k~~~l~~~~~p~----~~~~~~v~lfD~~~~~~~ 255 (1068)
T PLN02866 180 GPKLKEGYVMVKHLPKIPKSDDSRGCFPCCCFSCCNDNWQKVWAVLKPGFLALLEDPF----DAKPLDIIVFDVLPASNG 255 (1068)
T ss_pred CCCcceeEEEEeccCCCCCCCccCCccccccCCeecCchheeEEEEeccEEEEEecCC----CCceeEEEEEeccccccc
Confidence 445789999988 2 1 01 3699999999999999998884 345665554331
Q ss_pred ----eEEE----Eec---------cCCceeEEEeccchhhhccchhhhhhhhhh
Q 045778 79 ----CLTV----KCA---------EDGEYTMYSVADTEKEKGERINSIGRAIVQ 115 (132)
Q Consensus 79 ----~~~v----~~~---------~~~~r~~~f~A~s~~e~~~Wi~aI~~~i~~ 115 (132)
...+ +.. ..+.|+..|.|.|...+..|+.+|+.+..+
T Consensus 256 ~~~~~~~~~~~~k~~~~~~~~~~i~~~~r~l~l~~~s~~~~~~w~~ai~~~~~~ 309 (1068)
T PLN02866 256 NGEGQISLAKEIKERNPLRFGFKVTCGNRSIRLRTKSSAKVKDWVAAINDAGLR 309 (1068)
T ss_pred CCCcceeecccccccCCCcceEEEecCceEEEEEECCHHHHHHHHHHHHHHHhc
Confidence 0000 000 117889999999999999999999988643
No 63
>cd01224 PH_Collybistin Collybistin pleckstrin homology (PH) domain. Collybistin pleckstrin homology (PH) domain. Collybistin is GEF which induces submembrane clustering of the receptor-associated peripheral membrane protein gephyrin. It consists of an SH3 domain, followed by a RhoGEF(dbH) and PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=97.35 E-value=0.00019 Score=49.42 Aligned_cols=82 Identities=12% Similarity=0.082 Sum_probs=56.2
Q ss_pred CCCcchhHhHhhhhcCCCeeeccccceeeeecccccccCCCCCcceeecceEEEEeccC--------------------C
Q 045778 29 EIGPANKARRLHQNLAPPLVHLKQGEHLWFKDSHNITRGSTPRGFIPVGTCLTVKCAED--------------------G 88 (132)
Q Consensus 29 ~~GwL~Kqg~~~k~WkrRwFvL~~~~L~yyk~~~~~~~~~~~~g~I~L~~~~~v~~~~~--------------------~ 88 (132)
++|-|.+.+...+.=+.|+|-|=++.|.|-|...--...-.-+|.|+|..+.++.. +| .
T Consensus 4 ~~Gel~~~s~~~g~~q~R~~FLFD~~LI~CKkd~~r~~~~~yKgri~l~~~~I~d~-~Dg~~~~~~~~~knafkl~~~~~ 82 (109)
T cd01224 4 LQGEATRQKQNKGWNSSRVLFLFDHQMVLCKKDLIRRDHLYYKGRIDLDRCEVVNI-RDGKMFSSGHTIKNSLKIYSEST 82 (109)
T ss_pred EeeeEEEEecccCCcccEEEEEecceEEEEecccccCCcEEEEEEEEcccEEEEEC-CCCccccCCceeEEEEEEEEcCC
Confidence 46767766532223457999999999999885420011234478899988765432 11 3
Q ss_pred ceeEEEeccchhhhccchhhhhh
Q 045778 89 EYTMYSVADTEKEKGERINSIGR 111 (132)
Q Consensus 89 ~r~~~f~A~s~~e~~~Wi~aI~~ 111 (132)
++.|.|+|.|+++.+.|++||..
T Consensus 83 ~~~~~f~~Kt~e~K~~Wm~a~~~ 105 (109)
T cd01224 83 DEWYLFSFKSAERKHRWLSAFAL 105 (109)
T ss_pred CeEEEEEECCHHHHHHHHHHHHH
Confidence 56799999999999999999843
No 64
>PF15404 PH_4: Pleckstrin homology domain
Probab=97.27 E-value=0.00023 Score=53.23 Aligned_cols=33 Identities=21% Similarity=0.145 Sum_probs=28.8
Q ss_pred CCCcchhHhHhhhhcCCCeeeccccceeeeecc
Q 045778 29 EIGPANKARRLHQNLAPPLVHLKQGEHLWFKDS 61 (132)
Q Consensus 29 ~~GwL~Kqg~~~k~WkrRwFvL~~~~L~yyk~~ 61 (132)
+.|.|+.+.+....++++|+||..+.|..|...
T Consensus 1 ~sG~LY~K~~khs~F~~~~vvL~~G~Li~f~~~ 33 (185)
T PF15404_consen 1 MSGYLYQKPRKHSTFKKYFVVLIPGFLILFQLF 33 (185)
T ss_pred CCceeeecCCCCCCceEEEEEEeCCEEEEEEEE
Confidence 579999887777899999999999999888764
No 65
>PF12814 Mcp5_PH: Meiotic cell cortex C-terminal pleckstrin homology; InterPro: IPR024774 This pleckstrin homology domain is found in eukaryotic proteins, including Mcp5, a fungal protein that anchors dynein at the cell cortex during the horsetail phase (prophase I) of meiosis. During prophase I of fission yeast all the telomeres become bundled at the spindle pole body and subsequently the nucleus undergoes a dynamic oscillation, resulting in elongated nuclear morphology known as "horsetail" nucleus. The pleckstrin homology domain is necessary for the cortical localisation of the Mcp5 protein during meiosis [].; GO: 0005515 protein binding, 0032065 cortical protein anchoring, 0005938 cell cortex
Probab=97.26 E-value=0.00034 Score=48.84 Aligned_cols=84 Identities=10% Similarity=0.034 Sum_probs=53.4
Q ss_pred CCcchhHhHh-----hhhcCCCeeecccc--ceeeeeccccc-ccCCCCCcceeecceEEEEecc---------------
Q 045778 30 IGPANKARRL-----HQNLAPPLVHLKQG--EHLWFKDSHNI-TRGSTPRGFIPVGTCLTVKCAE--------------- 86 (132)
Q Consensus 30 ~GwL~Kqg~~-----~k~WkrRwFvL~~~--~L~yyk~~~~~-~~~~~~~g~I~L~~~~~v~~~~--------------- 86 (132)
-.||.|-++. .+..++|||-|... .|+|....... .....-.+.|.|..+..|....
T Consensus 12 G~~l~Ky~r~~~~~~~~~~h~R~fwv~~~~~~L~Ws~~~p~~~~~~~~~~~~i~I~~v~~V~~~~~~~~~~~~~~~~~si 91 (123)
T PF12814_consen 12 GEWLYKYTRKGRSGISEKPHRRYFWVDPYTRTLYWSSSNPKSENPSESKAKSIRIESVTEVKDGNPSPPGLKKPDHNKSI 91 (123)
T ss_pred ccEEEEEcccccCccCCCcEEEEEEEeCCCCEEEecCCCCCccccccccccceEEeeeEEecCCCCCCccccccccceEE
Confidence 3488885432 26899999999864 46666533100 0001122456666654443110
Q ss_pred ---CCceeEEEeccchhhhccchhhhhhhh
Q 045778 87 ---DGEYTMYSVADTEKEKGERINSIGRAI 113 (132)
Q Consensus 87 ---~~~r~~~f~A~s~~e~~~Wi~aI~~~i 113 (132)
.+.|+.-|.|+|.++.+-|+.+|+-.+
T Consensus 92 ~i~t~~R~L~l~a~s~~~~~~W~~aL~~L~ 121 (123)
T PF12814_consen 92 IIVTPDRSLDLTAPSRERHEIWFNALRYLL 121 (123)
T ss_pred EEEcCCeEEEEEeCCHHHHHHHHHHHHHHh
Confidence 078899999999999999999997654
No 66
>cd01222 PH_clg Clg (common-site lymphoma/leukemia guanine nucleotide exchange factor) pleckstrin homology (PH) domain. Clg (common-site lymphoma/leukemia guanine nucleotide exchange factor) pleckstrin homology (PH) domain. Clg contains a RhoGEF (DH) domain and a PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=97.20 E-value=0.0005 Score=46.34 Aligned_cols=80 Identities=20% Similarity=0.151 Sum_probs=52.3
Q ss_pred CCCCcchhHhHhhhhcCCCeeeccccceeeeecccccccCCCCCcceeecceEEEEecc------------CCceeEEEe
Q 045778 28 GEIGPANKARRLHQNLAPPLVHLKQGEHLWFKDSHNITRGSTPRGFIPVGTCLTVKCAE------------DGEYTMYSV 95 (132)
Q Consensus 28 ~~~GwL~Kqg~~~k~WkrRwFvL~~~~L~yyk~~~~~~~~~~~~g~I~L~~~~~v~~~~------------~~~r~~~f~ 95 (132)
+++|.|.-.+ .=+.|++-|=+..|.+-+..++ .-.-+..|.++...+++..+ .+.+.|.|+
T Consensus 5 lleg~l~~~~----~~~eR~vFLFe~~ll~~K~~~~---~y~~K~~i~~~~l~i~e~~~~d~~~F~v~~~~~p~~~~~l~ 77 (97)
T cd01222 5 LLEGRFREHG----GGKPRLLFLFQTMLLIAKPRGD---KYQFKAYIPCKNLMLVEHLPGEPLCFRVIPFDDPKGALQLT 77 (97)
T ss_pred eeeceEEeec----CCCceEEEEecccEEEEEecCC---eeEEEEEEEecceEEecCCCCCCcEEEEEecCCCceEEEEE
Confidence 4456555322 2456888888888887765531 23345556665433322211 255799999
Q ss_pred ccchhhhccchhhhhhhhh
Q 045778 96 ADTEKEKGERINSIGRAIV 114 (132)
Q Consensus 96 A~s~~e~~~Wi~aI~~~i~ 114 (132)
|.|+++++.||++|+.+|-
T Consensus 78 A~s~e~K~~W~~~i~~~i~ 96 (97)
T cd01222 78 ARNREEKRIWTQQLKRAML 96 (97)
T ss_pred ecCHHHHHHHHHHHHHHhh
Confidence 9999999999999998874
No 67
>cd01228 PH_BCR-related BCR (breakpoint cluster region)-related pleckstrin homology (PH) domain. BCR (breakpoint cluster region)-related pleckstrin homology (PH) domain. The BCR-related protein has a RhoGEF(DH) domain followed by a PH domain, a C2 domain and a RhoGAP domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinases, tyrosine kinases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=97.08 E-value=0.0007 Score=45.45 Aligned_cols=82 Identities=11% Similarity=-0.028 Sum_probs=55.2
Q ss_pred CCCCcchhHhHhhhhcCCCeeeccccceeeeecc--cccc-cCCCCCcceeecceEEE----EeccCCceeEEEeccchh
Q 045778 28 GEIGPANKARRLHQNLAPPLVHLKQGEHLWFKDS--HNIT-RGSTPRGFIPVGTCLTV----KCAEDGEYTMYSVADTEK 100 (132)
Q Consensus 28 ~~~GwL~Kqg~~~k~WkrRwFvL~~~~L~yyk~~--~~~~-~~~~~~g~I~L~~~~~v----~~~~~~~r~~~f~A~s~~ 100 (132)
+.+|+|.|-. .+.-|.|=|-|=++-|.|-+-. ...+ ..-...=.|||+..... .....+.++|.|.|.|..
T Consensus 4 v~eg~lvel~--~~~rK~R~~FLFnDlLvc~~ik~~~~~k~~kY~~~w~IPL~dl~~~~~~~~~~~~~~KSf~~~asS~~ 81 (96)
T cd01228 4 VKDSFLVELV--EGSRKLRHLFLFTDVLLCAKLKKTSRGKHQQYDCKWYIPLADLSFPSEPFRIHNKNGKSYTFLLSSDY 81 (96)
T ss_pred cccceeeeeh--hCCCcceEEEeeccEEEEEEeeeccCccccccceeEEEEhHHheecchhhhccccCCceEEEEecCHH
Confidence 5789999865 3456778888888777765432 1000 11233447888875321 112227899999999999
Q ss_pred hhccchhhhhh
Q 045778 101 EKGERINSIGR 111 (132)
Q Consensus 101 e~~~Wi~aI~~ 111 (132)
|+.+|+.+|+.
T Consensus 82 Er~eW~~hI~~ 92 (96)
T cd01228 82 ERSEWRESIQK 92 (96)
T ss_pred HHHHHHHHHHH
Confidence 99999999965
No 68
>KOG1117 consensus Rho- and Arf-GTPase activating protein ARAP3 [Signal transduction mechanisms; Cytoskeleton]
Probab=97.05 E-value=0.00071 Score=60.43 Aligned_cols=80 Identities=19% Similarity=0.236 Sum_probs=61.3
Q ss_pred CCCcchhHhH----------hhhhcCCCeeeccccceeeeecccccccCCCCCcceeecceEE--EEeccC---------
Q 045778 29 EIGPANKARR----------LHQNLAPPLVHLKQGEHLWFKDSHNITRGSTPRGFIPVGTCLT--VKCAED--------- 87 (132)
Q Consensus 29 ~~GwL~Kqg~----------~~k~WkrRwFvL~~~~L~yyk~~~~~~~~~~~~g~I~L~~~~~--v~~~~~--------- 87 (132)
..|+|++.-. ...--.++||||-|+.|+||.++. ..+|.|.|.+..+.. +...++
T Consensus 494 ~~~fLyc~~sa~~kl~~drr~~Ee~nr~wcVlg~g~ls~fen~~----S~tP~~lI~~~Eivclav~~pd~~pn~~~~f~ 569 (1186)
T KOG1117|consen 494 LCGFLYCAPSAASKLSSDRRLREETNRKWCVLGGGFLSYFENEK----STTPNGLININEIVCLAVHPPDTYPNTGFIFI 569 (1186)
T ss_pred ccceeeechhhccCCCChhhhcccCCCceEEcCcchhhhhhhcC----CCCCCceeeccceEEEeecCCCCCCCcCceeE
Confidence 3488887532 223567899999999999999884 589999999986433 322222
Q ss_pred ------CceeEEEeccchhhhccchhhhhhh
Q 045778 88 ------GEYTMYSVADTEKEKGERINSIGRA 112 (132)
Q Consensus 88 ------~~r~~~f~A~s~~e~~~Wi~aI~~~ 112 (132)
.+|.|.|-+++.++...|..||.+.
T Consensus 570 fE~~l~~er~~~fgle~ad~l~~wt~aiaKh 600 (1186)
T KOG1117|consen 570 FEIYLPGERVFLFGLETADALRKWTEAIAKH 600 (1186)
T ss_pred EEEeecccceEEeecccHHHHHHHHHHHHHh
Confidence 7889999999999999999998553
No 69
>cd01221 PH_ephexin Ephexin Pleckstrin homology (PH) domain. Ephexin Pleckstrin homology (PH) domain. Ephexin contains a RhoGEF (DH) followed by a PH domain and an SH3 domain. The ephexin PH domain is believed to act with the DH domain in mediating protein-protein interactions with the Eph receptor. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=97.05 E-value=0.00034 Score=49.28 Aligned_cols=68 Identities=15% Similarity=0.175 Sum_probs=43.7
Q ss_pred cCCCeeeccccceeeeecccc---cccCCCCCcceeecceEEE-------------------Eecc---CCceeEEEecc
Q 045778 43 LAPPLVHLKQGEHLWFKDSHN---ITRGSTPRGFIPVGTCLTV-------------------KCAE---DGEYTMYSVAD 97 (132)
Q Consensus 43 WkrRwFvL~~~~L~yyk~~~~---~~~~~~~~g~I~L~~~~~v-------------------~~~~---~~~r~~~f~A~ 97 (132)
-+.+|+.|=++.|.|-+.+.. .-.+..++..+.+..+... .-.+ ...+.+.|+|+
T Consensus 27 ~~~vylfLFnDlLl~tkkK~~~~f~V~dy~~r~~l~V~~~e~~~~~~~~~~~~~~~~~~F~ltLl~N~~gk~~el~L~a~ 106 (125)
T cd01221 27 ARTIYLFLFNDLLLITKKKLGSTFVVFDYAPRSFLRVEKIEPDNQKIPLGSNLVGRPNLFLLTLLRNADDKQAELLLSAD 106 (125)
T ss_pred CCcEEEEEecceEEEEEecCCCeEEEEeeccccceEEeecccccccccccccccCCCceEEEEeeccCCCCEEEEEEECC
Confidence 456799999999988765431 0012344555555543211 0011 14567999999
Q ss_pred chhhhccchhhhh
Q 045778 98 TEKEKGERINSIG 110 (132)
Q Consensus 98 s~~e~~~Wi~aI~ 110 (132)
|+.|+.+||.||.
T Consensus 107 S~sdr~rWi~Al~ 119 (125)
T cd01221 107 SQSDRERWLSALA 119 (125)
T ss_pred CHHHHHHHHHhcC
Confidence 9999999999983
No 70
>KOG3531 consensus Rho guanine nucleotide exchange factor CDEP [Signal transduction mechanisms]
Probab=96.80 E-value=0.00029 Score=62.57 Aligned_cols=86 Identities=14% Similarity=0.038 Sum_probs=66.0
Q ss_pred CCCCcchhHhHhhhhcCCCeeeccccceeeeecccccccCCCCCcceeecceEEEEecc-C------------CceeEEE
Q 045778 28 GEIGPANKARRLHQNLAPPLVHLKQGEHLWFKDSHNITRGSTPRGFIPVGTCLTVKCAE-D------------GEYTMYS 94 (132)
Q Consensus 28 ~~~GwL~Kqg~~~k~WkrRwFvL~~~~L~yyk~~~~~~~~~~~~g~I~L~~~~~v~~~~-~------------~~r~~~f 94 (132)
...|||..+-..-..|+|-|.|...-+|++||+- ++..|.-+++|=+..+-.+.+ + ..-.|+|
T Consensus 925 qLsg~LlrkfknssgwqkLwvvft~fcl~fyKS~----qD~~~laslPlLgysvs~P~~~d~i~K~~vfkl~fk~hvyff 1000 (1036)
T KOG3531|consen 925 QLSGYLLRKFKNSSGWQKLWVVFTNFCLFFYKSH----QDSEPLASLPLLGYSVSIPAEPDPIQKDYVFKLKFKSHVYFF 1000 (1036)
T ss_pred hhhHHHHHHhhccccceeeeeeecceeeEeeccc----ccccccccccccccccCCCCCCCCcchhheeeeehhhhHHHH
Confidence 4579998776555689999999999999999998 467888888887654322222 2 4446789
Q ss_pred eccchhhhccchhhhhhhhhhhc
Q 045778 95 VADTEKEKGERINSIGRAIVQHS 117 (132)
Q Consensus 95 ~A~s~~e~~~Wi~aI~~~i~~~~ 117 (132)
.|++.-..++|+..|+.+-..+.
T Consensus 1001 raes~yt~~rw~evi~~a~~s~d 1023 (1036)
T KOG3531|consen 1001 RAESYYTFERWMEVITDAPSSAD 1023 (1036)
T ss_pred hhhhhhhhhhHHHHhhcCCccCC
Confidence 99999999999999987654433
No 71
>KOG0248 consensus Cytoplasmic protein Max-1, contains PH, MyTH4 and FERM domains [Cytoskeleton]
Probab=96.75 E-value=0.00023 Score=62.13 Aligned_cols=83 Identities=5% Similarity=-0.124 Sum_probs=64.5
Q ss_pred cCCCCCCcchhHhHhhhhcCCCeeeccccceeeeecccccccCCCCCcceeecc-eEE----EEeccC---CceeEEEec
Q 045778 25 SQPGEIGPANKARRLHQNLAPPLVHLKQGEHLWFKDSHNITRGSTPRGFIPVGT-CLT----VKCAED---GEYTMYSVA 96 (132)
Q Consensus 25 ~~~~~~GwL~Kqg~~~k~WkrRwFvL~~~~L~yyk~~~~~~~~~~~~g~I~L~~-~~~----v~~~~~---~~r~~~f~A 96 (132)
+-+.+.|+|.|+...+|+|++|||+++++.+.||+++. ..+.|.|-+.+ |.. +..... ...++++-+
T Consensus 257 ~~~s~~k~lkrr~~v~k~gqi~~y~~~~~~~~~p~s~~-----d~~s~~~~~~~~~s~~fqli~~t~~~~~~~~s~~lt~ 331 (936)
T KOG0248|consen 257 QLTSRIKSLKRRYVVFKNGQISFYRKHNNRDEEPASKI-----DIRSVTKLEQQGAAYAFQLITSTDKMNFMTESERTTH 331 (936)
T ss_pred cchHHHHHHHhHheeeccceEEEEEcCCCccccccCcc-----cccccceeeccchhHHhhhhhhceeEEEeccChhhhh
Confidence 44677899999999999999999999999999999985 45677776653 211 111111 456889999
Q ss_pred cchhhhccchhhhhhh
Q 045778 97 DTEKEKGERINSIGRA 112 (132)
Q Consensus 97 ~s~~e~~~Wi~aI~~~ 112 (132)
|...-.++||++++..
T Consensus 332 dw~~iL~~~iKv~~~~ 347 (936)
T KOG0248|consen 332 DWVTILSAAIKATTLR 347 (936)
T ss_pred hhHHHHHHHHHHHhcc
Confidence 9999999999999665
No 72
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=96.74 E-value=0.00055 Score=58.86 Aligned_cols=37 Identities=16% Similarity=0.042 Sum_probs=28.5
Q ss_pred CCCCCCcchhHhH-hh-hhcCCCeeeccc-cceeeeeccc
Q 045778 26 QPGEIGPANKARR-LH-QNLAPPLVHLKQ-GEHLWFKDSH 62 (132)
Q Consensus 26 ~~~~~GwL~Kqg~-~~-k~WkrRwFvL~~-~~L~yyk~~~ 62 (132)
-|.++|.|.|+++ .. |.||+.|+.|-. +.|.||-+-.
T Consensus 301 IPIKQg~LlKrSgk~L~keWKKKYVtlcsnG~LtYh~sL~ 340 (749)
T KOG0705|consen 301 IPIKQGMLLKRSGKSLNKEWKKKYVTLCSNGVLTYHPSLG 340 (749)
T ss_pred cchhhhhHHHhcchHHHHHHhhhheeeccCcceeecccHH
Confidence 3789999999853 44 999999999974 5677776543
No 73
>KOG0932 consensus Guanine nucleotide exchange factor EFA6 [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.70 E-value=0.00043 Score=59.41 Aligned_cols=88 Identities=16% Similarity=0.020 Sum_probs=58.4
Q ss_pred CCCCcchhH------h----HhhhhcCCCeeeccccceeeeecccccccCCCCCcceeecceEEEE-----eccC-----
Q 045778 28 GEIGPANKA------R----RLHQNLAPPLVHLKQGEHLWFKDSHNITRGSTPRGFIPVGTCLTVK-----CAED----- 87 (132)
Q Consensus 28 ~~~GwL~Kq------g----~~~k~WkrRwFvL~~~~L~yyk~~~~~~~~~~~~g~I~L~~~~~v~-----~~~~----- 87 (132)
-+.|+|..+ | ...+.||.=|-+|+|-.||+-+++. +..+++-.-+|.....|. .+.+
T Consensus 507 Yk~G~L~RK~had~DgkKTPrGkRgWk~fya~LkG~vLYlqkDey---~p~kalse~~lknavsvHHALAt~AtdY~KKp 583 (774)
T KOG0932|consen 507 YKSGFLARKYHADMDGKKTPRGKRGWKMFYAVLKGMVLYLQKDEY---KPGKALSESDLKNAVSVHHALATPATDYSKKP 583 (774)
T ss_pred hhhhhhhhhhhccccCCcCCccchhHHHHHHHHhhheEEeecccc---CcccchhhhhhhhhhhhhhhhcCCCcccccCC
Confidence 467888764 1 1346798889999998888888774 122222222343322221 1222
Q ss_pred --------CceeEEEeccchhhhccchhhhhhhhhhhcc
Q 045778 88 --------GEYTMYSVADTEKEKGERINSIGRAIVQHSR 118 (132)
Q Consensus 88 --------~~r~~~f~A~s~~e~~~Wi~aI~~~i~~~~~ 118 (132)
..|.|.|+|.|.+||+.||..|+-+.+..+.
T Consensus 584 ~Vf~lrtAdwrv~LFQaps~eEmqsWi~rIN~vAA~fSa 622 (774)
T KOG0932|consen 584 HVFKLRTADWRVFLFQAPSQEEMQSWIERINLVAAAFSA 622 (774)
T ss_pred ceEEEEeccceeEEEeCCCHHHHHHHHHHHHHHHHhccC
Confidence 6789999999999999999999876655543
No 74
>KOG4424 consensus Predicted Rho/Rac guanine nucleotide exchange factor/faciogenital dysplasia protein 3 [Signal transduction mechanisms]
Probab=96.66 E-value=0.00065 Score=58.21 Aligned_cols=92 Identities=18% Similarity=0.134 Sum_probs=63.8
Q ss_pred cCCCCCCcchhHhHhhhhcCCCeeeccccceeeeecccccc-cCCCCCcceeecceEEEEec-cC---------CceeEE
Q 045778 25 SQPGEIGPANKARRLHQNLAPPLVHLKQGEHLWFKDSHNIT-RGSTPRGFIPVGTCLTVKCA-ED---------GEYTMY 93 (132)
Q Consensus 25 ~~~~~~GwL~Kqg~~~k~WkrRwFvL~~~~L~yyk~~~~~~-~~~~~~g~I~L~~~~~v~~~-~~---------~~r~~~ 93 (132)
+.-+++|-|.|......+-..||++|=++.|.|-+-..... .-..++-.+++..+...... ++ ..+...
T Consensus 270 reLiKEG~l~Kis~k~~~~qeRylfLFNd~~lyc~~r~~~~~~k~~~r~~~s~~~~~v~~~~~~~~~~tF~~~G~~r~ve 349 (623)
T KOG4424|consen 270 RELIKEGQLQKISAKNGTTQERYLFLFNDILLYCKPRKRLPGSKYEVRARCSISHMQVQEDDNEELPHTFILTGKKRGVE 349 (623)
T ss_pred HHHhhccceeeeeccCCCcceeEEEEehhHHHhhhhhhhcccceeccceeeccCcchhcccccccCCceEEEecccceEE
Confidence 34588999999988788999999999999888876553100 00122233344443221111 10 478889
Q ss_pred Eeccchhhhccchhhhhhhhhhh
Q 045778 94 SVADTEKEKGERINSIGRAIVQH 116 (132)
Q Consensus 94 f~A~s~~e~~~Wi~aI~~~i~~~ 116 (132)
|.|.|+++.++||++|+.+|..+
T Consensus 350 l~a~t~~ek~eWv~~I~~~Id~~ 372 (623)
T KOG4424|consen 350 LQARTEQEKKEWVQAIQDAIDKH 372 (623)
T ss_pred eecCchhhHHHHHHHHHHHHHHH
Confidence 99999999999999999999875
No 75
>PF15408 PH_7: Pleckstrin homology domain
Probab=96.44 E-value=0.00032 Score=46.47 Aligned_cols=79 Identities=9% Similarity=0.113 Sum_probs=48.8
Q ss_pred CCcchhHhHhhhhcCCCeeeccccceeeeecccccccCCCCCcceeecceEEE-------EeccC-------------Cc
Q 045778 30 IGPANKARRLHQNLAPPLVHLKQGEHLWFKDSHNITRGSTPRGFIPVGTCLTV-------KCAED-------------GE 89 (132)
Q Consensus 30 ~GwL~Kqg~~~k~WkrRwFvL~~~~L~yyk~~~~~~~~~~~~g~I~L~~~~~v-------~~~~~-------------~~ 89 (132)
+|||+.--. ..-+|||.+|++..|.+|.++. -.-..++.|+..... +..++ ..
T Consensus 1 EGYLY~~E~--~si~rRF~~L~~K~~~~~~~KG-----G~~L~sF~L~~s~~s~Pm~~~~~A~~N~Gi~A~G~L~~~~~~ 73 (104)
T PF15408_consen 1 EGYLYRDED--SSIQRRFVMLRSKQFNMYEDKG-----GQYLCSFQLSSSVVSHPMVNFSQAVPNLGINAFGFLMYSPSR 73 (104)
T ss_pred CCeEEEecc--chHHHHHHhhhhceeEEecccC-----CceeeeeehhhhhhhcccccccccCCCCCeeEEEEEEecCCc
Confidence 577775321 2347899999999888888774 223334444331110 00011 34
Q ss_pred eeEEEeccchhhhccchhhhhhhhhh
Q 045778 90 YTMYSVADTEKEKGERINSIGRAIVQ 115 (132)
Q Consensus 90 r~~~f~A~s~~e~~~Wi~aI~~~i~~ 115 (132)
+..-+.|++.+-++.||+++++--.+
T Consensus 74 ~~~~~FA~S~~~~~~Wi~~mN~~s~~ 99 (104)
T PF15408_consen 74 RHVQCFASSKKVCQSWIQVMNSPSFR 99 (104)
T ss_pred chhhhhhhHHHHHHHHHHHhcChhhh
Confidence 55567899999999999999764333
No 76
>cd01226 PH_exo84 Exocyst complex 84-kDa subunit Pleckstrin Homology (PH) domain. Exocyst complex 84-kDa subunit Pleckstrin Homology (PH) domain. Exo84 is a subunit of the exocyt complex, which is important in intracellular trafficking. In metazoa, Exo84 has a PH domain towards its N-terminus. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=95.92 E-value=0.01 Score=40.28 Aligned_cols=66 Identities=9% Similarity=-0.003 Sum_probs=43.5
Q ss_pred CCeeeccccceeeeecccccccCCCCCcceeecceEEEEeccC------------CceeEEEeccchhhhccchhhhhhh
Q 045778 45 PPLVHLKQGEHLWFKDSHNITRGSTPRGFIPVGTCLTVKCAED------------GEYTMYSVADTEKEKGERINSIGRA 112 (132)
Q Consensus 45 rRwFvL~~~~L~yyk~~~~~~~~~~~~g~I~L~~~~~v~~~~~------------~~r~~~f~A~s~~e~~~Wi~aI~~~ 112 (132)
+..|-|=++.|.|-.-..+ +--.-...++|.+...+ ..+| +.+++.++|+|+++..+||..|+.|
T Consensus 21 rv~~FLfND~Lvva~~~~~--~ky~~~~~~~L~~i~V~-ni~D~~~~kNafki~t~~~s~i~qaes~~~K~eWl~~le~a 97 (100)
T cd01226 21 RVMLFLLNDRLIVGNINAA--GKYVMESTYSLNSVAVV-NVKDRENAKKVLKLLIFPESRIYQCESARIKTEWFEELEQA 97 (100)
T ss_pred eEEEEEeccEEEEEEeccc--ceEEEEEEEehHHeEEE-ecCCCcCcCceEEEEeCCccEEEEeCCHHHHHHHHHHHHHH
Confidence 3436666667766533210 11334567777775432 2222 7789999999999999999999887
Q ss_pred h
Q 045778 113 I 113 (132)
Q Consensus 113 i 113 (132)
+
T Consensus 98 ~ 98 (100)
T cd01226 98 K 98 (100)
T ss_pred h
Confidence 6
No 77
>cd01232 PH_TRIO Trio pleckstrin homology (PH) domain. Trio pleckstrin homology (PH) domain. Trio is a multidomain signaling protein that contains two RhoGEF(DH)-PH domains in tandem. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=95.80 E-value=0.033 Score=38.56 Aligned_cols=26 Identities=15% Similarity=0.259 Sum_probs=23.5
Q ss_pred ceeEEEeccchhhhccchhhhhhhhh
Q 045778 89 EYTMYSVADTEKEKGERINSIGRAIV 114 (132)
Q Consensus 89 ~r~~~f~A~s~~e~~~Wi~aI~~~i~ 114 (132)
..+|.++|.|.++.++|+..|+.++.
T Consensus 88 ~~~~ilqA~s~e~K~~W~~~I~~il~ 113 (114)
T cd01232 88 DNRIILKANSQETKQEWVKKIREILQ 113 (114)
T ss_pred ceEEEEECCCHHHHHHHHHHHHHHhh
Confidence 47999999999999999999988764
No 78
>cd01225 PH_Cool_Pix Cool (cloned out of library)/Pix (PAK-interactive exchange factor) pleckstrin homology (PH) domain. Cool (cloned out of library)/Pix (PAK-interactive exchange factor) pleckstrin homology (PH) domain. Cool/Pix contains an N-terminal SH3 domain followed by a RhoGEF (DH) and PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=95.46 E-value=0.019 Score=39.55 Aligned_cols=69 Identities=14% Similarity=0.126 Sum_probs=48.1
Q ss_pred cCCCeeeccccceeeeecccccccCCCCCcceeecceEEEEeccC-------------CceeEEEeccchhhhccchhhh
Q 045778 43 LAPPLVHLKQGEHLWFKDSHNITRGSTPRGFIPVGTCLTVKCAED-------------GEYTMYSVADTEKEKGERINSI 109 (132)
Q Consensus 43 WkrRwFvL~~~~L~yyk~~~~~~~~~~~~g~I~L~~~~~v~~~~~-------------~~r~~~f~A~s~~e~~~Wi~aI 109 (132)
=..||++|=.+.|+...-+.+. .+-.-.|-++|++..+ ...++ ...+..+.|.+.+|.++|+..|
T Consensus 28 ~~eRyLvLFp~~LlilS~s~r~-sGf~yqGkLPL~~i~v-~~lEd~e~~~~aFeI~G~li~~i~v~C~~~~e~~~Wl~hL 105 (111)
T cd01225 28 KRERYLVLFPNVLLMLSASPRM-SGFIYQGKLPLTGIIV-TRLEDTEALKNAFEISGPLIERIVVVCNNPQDAQEWVELL 105 (111)
T ss_pred cceeEEEEcCceEEEEEcCCCc-cceEEeeeecccccEE-echHhccCccceEEEeccCcCcEEEEeCCHHHHHHHHHHH
Confidence 4679999999998877654211 2334468888888643 32222 2246678899999999999999
Q ss_pred hhhh
Q 045778 110 GRAI 113 (132)
Q Consensus 110 ~~~i 113 (132)
++-+
T Consensus 106 ~~~~ 109 (111)
T cd01225 106 NANN 109 (111)
T ss_pred Hhhc
Confidence 7743
No 79
>KOG1738 consensus Membrane-associated guanylate kinase-interacting protein/connector enhancer of KSR-like [Nucleotide transport and metabolism]
Probab=95.09 E-value=0.0051 Score=53.27 Aligned_cols=57 Identities=9% Similarity=0.116 Sum_probs=46.0
Q ss_pred ceeeecCCCCCCcchhHhH---hhhhcCCCeeeccccceeeeecccccccCCCCCcceeecceE
Q 045778 20 GIEFWSQPGEIGPANKARR---LHQNLAPPLVHLKQGEHLWFKDSHNITRGSTPRGFIPVGTCL 80 (132)
Q Consensus 20 ~~~~~~~~~~~GwL~Kqg~---~~k~WkrRwFvL~~~~L~yyk~~~~~~~~~~~~g~I~L~~~~ 80 (132)
+.+.+..-+++|||.+.+. ....|++-||||.+.-|+.|.... ...+.++|.|....
T Consensus 555 ~~~~l~~G~~qg~~~r~k~~~~~~~kW~k~~~~l~~~~l~~y~n~~----~~~~e~~i~l~~~~ 614 (638)
T KOG1738|consen 555 ALELLGRGDRQGWLTRLKLNHLTQEKWRKIWMVLNDDPLLNYRNHR----VRAAESVIKLPLFT 614 (638)
T ss_pred HHHHhccchhhccchhhccchHHHHHhhhheeeecCchhhhhhhhh----hhchhheeeccchh
Confidence 3445666788999998652 447899999999999999999984 57899999998753
No 80
>cd01223 PH_Vav Vav pleckstrin homology (PH) domain. Vav pleckstrin homology (PH) domain. Vav acts as a guanosine nucleotide exchange factor(GEF) for Rho/Rac proteins. Mammalian Vav proteins consist of a calponin homology (CH) domain, an acidic region, a rho-GEF (DH)domain, a PH domain, a Zinc finger region and an SH2 domain, flanked by two SH3 domains. In invertebrates such as Drosophila and C.elegans, Vav is missing the N-terminal SH3 domain . PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=94.64 E-value=0.039 Score=38.39 Aligned_cols=88 Identities=13% Similarity=0.051 Sum_probs=50.5
Q ss_pred CCCCCcchhHhHhhhhcCCCeeeccccceeeeecccccccC---CCCCcceeecceEEEEe----c--------------
Q 045778 27 PGEIGPANKARRLHQNLAPPLVHLKQGEHLWFKDSHNITRG---STPRGFIPVGTCLTVKC----A-------------- 85 (132)
Q Consensus 27 ~~~~GwL~Kqg~~~k~WkrRwFvL~~~~L~yyk~~~~~~~~---~~~~g~I~L~~~~~v~~----~-------------- 85 (132)
+...|.|.-+......=+.||.-|-+.-|..-|...+. .+ -.-+..+.|..+.+... .
T Consensus 4 ~~~DGelk~k~~~~~k~k~RyiFLFDk~lI~CK~~~~~-~~~~~Y~~Ke~~~l~~~~I~~~~~~d~~~~~~~~~~~f~L~ 82 (116)
T cd01223 4 PLLDGEVRIKASEDQKTKLRYIFLFDKAVIVCKALGDN-TGDMQYTYKDIHDLADYKIENNPSRDTEGRDTRWKYGFYLA 82 (116)
T ss_pred cccCCceEEeEeccCCCceeEEEEecceEEEEEecCCC-CCCccEEhHHhhhhheeeeEecCccCcccCCcceEEEEEEE
Confidence 45566665554433446688877777666666644310 00 01122333333221110 0
Q ss_pred -cCCceeEEEeccchhhhccchhhhhhhhhh
Q 045778 86 -EDGEYTMYSVADTEKEKGERINSIGRAIVQ 115 (132)
Q Consensus 86 -~~~~r~~~f~A~s~~e~~~Wi~aI~~~i~~ 115 (132)
.++...+.|+|.|+++++.||.||..|+..
T Consensus 83 ~~~~~~~~~f~~Ktee~K~kWm~al~~a~sn 113 (116)
T cd01223 83 HKQGKTGFTFYFKTEHLRKKWLKALEMAMSN 113 (116)
T ss_pred ecCCCccEEEEeCCHHHHHHHHHHHHHHHhc
Confidence 113467899999999999999999988754
No 81
>cd01248 PH_PLC Phospholipase C (PLC) pleckstrin homology (PH) domain. Phospholipase C (PLC) pleckstrin homology (PH) domain. There are several isozymes of PLC (beta, gamma, delta, epsilon. zeta). While, PLC beta, gamma and delta all have N-terminal PH domains, lipid binding specificity is not conserved between them. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=94.47 E-value=0.056 Score=36.90 Aligned_cols=23 Identities=17% Similarity=0.222 Sum_probs=20.8
Q ss_pred ceeEEEeccchhhhccchhhhhh
Q 045778 89 EYTMYSVADTEKEKGERINSIGR 111 (132)
Q Consensus 89 ~r~~~f~A~s~~e~~~Wi~aI~~ 111 (132)
.++..|.|+|+++++.|+..|+.
T Consensus 92 ~k~L~lVA~s~~~a~~W~~gL~~ 114 (115)
T cd01248 92 LKSLDLVAPSEEEAKTWVSGLRK 114 (115)
T ss_pred eeEEEEEECCHHHHHHHHHHHhh
Confidence 57899999999999999999864
No 82
>KOG4807 consensus F-actin binding protein, regulates actin cytoskeletal organization [Cytoskeleton]
Probab=93.52 E-value=0.00072 Score=55.93 Aligned_cols=73 Identities=14% Similarity=0.178 Sum_probs=54.1
Q ss_pred hhhcCCCeeeccccceeeeecccccccCCCCCcceeecceEEEEec----------cCCceeEEEeccchhhhccchhhh
Q 045778 40 HQNLAPPLVHLKQGEHLWFKDSHNITRGSTPRGFIPVGTCLTVKCA----------EDGEYTMYSVADTEKEKGERINSI 109 (132)
Q Consensus 40 ~k~WkrRwFvL~~~~L~yyk~~~~~~~~~~~~g~I~L~~~~~v~~~----------~~~~r~~~f~A~s~~e~~~Wi~aI 109 (132)
.-.|++.||||++..+-||.++.. .......|.|+|.+|.-+... ...+..|.|.|-+.--+..||.|+
T Consensus 32 t~~~~k~~~~~~~~~~~~~~d~~A-~~~~~L~~~~~LR~C~~v~e~a~q~nY~~~i~~~~~~~tL~~~~s~Ir~~~~~A~ 110 (593)
T KOG4807|consen 32 TSQWKKHWFVLTDSSLKYYRDSTA-EEADELDGEIDLRSCTDVTEYAVQRNYGFQIHTKDAVYTLSAMTSGIRRNWIEAL 110 (593)
T ss_pred hHHHHHHHHHHhHHHHHHHHHHHH-HhcccCCccccHHHHHHHHHHHHHhccceeecccchhhhhHHHHHHHHHHHHHHH
Confidence 356999999999999999998852 122345799999998533110 014556788999999999999999
Q ss_pred hhhh
Q 045778 110 GRAI 113 (132)
Q Consensus 110 ~~~i 113 (132)
.+.+
T Consensus 111 ~kT~ 114 (593)
T KOG4807|consen 111 RKTV 114 (593)
T ss_pred Hhcc
Confidence 7543
No 83
>KOG3551 consensus Syntrophins (type beta) [Extracellular structures]
Probab=93.42 E-value=0.028 Score=46.61 Aligned_cols=85 Identities=20% Similarity=0.154 Sum_probs=57.5
Q ss_pred CCCCCCcchhH--hHhhhhcCCCeeeccccceeeeecccccc-cCCCCCcceeecceEEEEe------------------
Q 045778 26 QPGEIGPANKA--RRLHQNLAPPLVHLKQGEHLWFKDSHNIT-RGSTPRGFIPVGTCLTVKC------------------ 84 (132)
Q Consensus 26 ~~~~~GwL~Kq--g~~~k~WkrRwFvL~~~~L~yyk~~~~~~-~~~~~~g~I~L~~~~~v~~------------------ 84 (132)
++.+-|||.+| ++..+.|+.-+..|+...|.+|.+--..+ -=..|.-+-+|-....|.+
T Consensus 291 evkHiGWLaeq~~~~G~~~w~P~l~~lTekelliYes~P~~keaws~P~~~ypLvaTRLvhsg~~~~s~~~g~~lsFa~R 370 (506)
T KOG3551|consen 291 EVKHIGWLAEQVSGGGISQWKPKLMALTEKELLIYESMPWTKEAWSRPRHTYPLVATRLVHSGSGKGSVIKGLTLSFATR 370 (506)
T ss_pred chhhhhhHHhhccCCChhhhhhheeeechhhhhhhhcChhhHHHhcChhhhhhhhhhhheecCCCCCCCcCCceEEEEEe
Confidence 45667999998 45678999999999999988887642100 0123444444422111111
Q ss_pred --ccCCceeEEEeccchhhhccchhhhh
Q 045778 85 --AEDGEYTMYSVADTEKEKGERINSIG 110 (132)
Q Consensus 85 --~~~~~r~~~f~A~s~~e~~~Wi~aI~ 110 (132)
...+-++|.|.++|..|+..|..+|-
T Consensus 371 tGTrqGV~thlfrvEThrdLa~WtRslV 398 (506)
T KOG3551|consen 371 TGTRQGVETHLFRVETHRELAAWTRSLV 398 (506)
T ss_pred cccccceEEEEEEeccHHHHHHHHHHHH
Confidence 11167899999999999999999983
No 84
>cd01231 PH_Lnk LNK-family Pleckstrin homology (PH) domain. LNK-family Pleckstrin homology (PH) domain. The Lnk family of proteins consists of Lnk, APS and SH2B. They are adaptor proteins consisting of a PH domain and an SH2 domain, which mediates signaling through growth factor receptors. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. The lnk family PH domain is likely involved in targeting of the adaptor proteins to the plasma membrane.
Probab=92.65 E-value=0.094 Score=35.71 Aligned_cols=69 Identities=9% Similarity=0.081 Sum_probs=41.6
Q ss_pred hhcCCCeeecc----ccceeeeec-ccccccCCCCCcceeecceEEEEec-----cC----------CceeEEEeccchh
Q 045778 41 QNLAPPLVHLK----QGEHLWFKD-SHNITRGSTPRGFIPVGTCLTVKCA-----ED----------GEYTMYSVADTEK 100 (132)
Q Consensus 41 k~WkrRwFvL~----~~~L~yyk~-~~~~~~~~~~~g~I~L~~~~~v~~~-----~~----------~~r~~~f~A~s~~ 100 (132)
..|+|.=.+|. |..|.+|.- +- +.++|+-.|....+..|..+ +| +.-.|.|-|.++.
T Consensus 19 ~~WqkcRl~L~~~~gg~~le~~~~~pP---Kssrpk~~v~C~~I~EvR~tt~LEmPD~~nTFvLK~~~~~eyI~Ea~d~~ 95 (107)
T cd01231 19 ARWQRGRLVLRKAVGGYMLEFYLPLPP---KSSKPKLQVACSSISEVRECTRLEMPDNLYTFVLKVDDNTDIIFEVGDEQ 95 (107)
T ss_pred cccceeeEEEEecCCCceEEEEccCCC---CCCCCccccchhhhhhhhhcccccccCcccEEEEEecCCceEEEEcCCHH
Confidence 45777666664 234444433 22 35677766655432212111 11 4557899999999
Q ss_pred hhccchhhhhhh
Q 045778 101 EKGERINSIGRA 112 (132)
Q Consensus 101 e~~~Wi~aI~~~ 112 (132)
+++.|+..|+.|
T Consensus 96 q~~SWla~Ir~C 107 (107)
T cd01231 96 QLNSWLAELRYC 107 (107)
T ss_pred HHHHHHHHHhcC
Confidence 999999999754
No 85
>KOG4047 consensus Docking protein 1 (p62dok) [Signal transduction mechanisms]
Probab=92.06 E-value=0.2 Score=42.10 Aligned_cols=87 Identities=13% Similarity=0.060 Sum_probs=52.8
Q ss_pred cCCCCCCcchhHhHhh--hhcCCCeeecccc------ceeeeecccc--c-ccCCCCCcceeecceEEEEeccC----Cc
Q 045778 25 SQPGEIGPANKARRLH--QNLAPPLVHLKQG------EHLWFKDSHN--I-TRGSTPRGFIPVGTCLTVKCAED----GE 89 (132)
Q Consensus 25 ~~~~~~GwL~Kqg~~~--k~WkrRwFvL~~~------~L~yyk~~~~--~-~~~~~~~g~I~L~~~~~v~~~~~----~~ 89 (132)
..+++.|++.-+...+ |+|+++|.+|..+ +|..|.+... . ......+.+|-|+.|.++..... ..
T Consensus 6 ~~~~k~g~~~~~~~r~~~k~~~~~~~~L~~gs~~g~aRle~~~~~g~~~~~~~~~~~rR~~~ls~~~S~e~~~~~~~~~~ 85 (429)
T KOG4047|consen 6 SCLVKDGVPDNHRNKFKVKNVRDDGAELGSGSMELTARLEILESRGRESVRWPYRCLRRYGYLSNLFSFESGRRCQTGPG 85 (429)
T ss_pred CcccccCccchhhhhhccccccccceeeeccccccchhhhhhhccCCcccccchhcceeeEeeccceeeecccccccCCC
Confidence 4568899988877655 5999999999755 3444443221 0 01112246788888877754322 22
Q ss_pred eeEE--------Eeccchhhhccchhhhhh
Q 045778 90 YTMY--------SVADTEKEKGERINSIGR 111 (132)
Q Consensus 90 r~~~--------f~A~s~~e~~~Wi~aI~~ 111 (132)
-+.+ |.+++.-+..+||++|..
T Consensus 86 i~~~f~~~a~e~~~~~q~l~~~~w~~~i~~ 115 (429)
T KOG4047|consen 86 ITAFFCDRAEELFNMLQDLMQANWINAIEE 115 (429)
T ss_pred ceEEEecchHHHHHHHHHHHhhhhhhhhhh
Confidence 2233 334455577789999944
No 86
>cd01227 PH_Dbs Dbs (DBL's big sister) pleckstrin homology (PH) domain. Dbs (DBL's big sister) pleckstrin homology (PH) domain. Dbs is a guanine nucleotide exchange factor (GEF), which contains spectrin repeats, a rhoGEF (DH) domain and a PH domain. The Dbs PH domain participates in binding to both the Cdc42 and RhoA GTPases. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=90.49 E-value=0.53 Score=33.49 Aligned_cols=30 Identities=20% Similarity=0.165 Sum_probs=26.0
Q ss_pred CceeEEEeccchhhhccchhhhhhhhhhhc
Q 045778 88 GEYTMYSVADTEKEKGERINSIGRAIVQHS 117 (132)
Q Consensus 88 ~~r~~~f~A~s~~e~~~Wi~aI~~~i~~~~ 117 (132)
....|.+.|.|++..+.|++.|+..+.+..
T Consensus 90 ~~~~yilqA~t~e~K~~Wv~~I~~iL~~Q~ 119 (133)
T cd01227 90 REEVYILQAPTPEIKAAWVNEIRKVLTSQL 119 (133)
T ss_pred CCcEEEEEcCCHHHHHHHHHHHHHHHHHHH
Confidence 456999999999999999999988877653
No 87
>KOG1451 consensus Oligophrenin-1 and related Rho GTPase-activating proteins [Signal transduction mechanisms]
Probab=90.34 E-value=0.26 Score=43.07 Aligned_cols=86 Identities=9% Similarity=0.055 Sum_probs=53.2
Q ss_pred ecCCCCCCcchhHh--HhhhhcCCCeeeccccc-ee---eeecccccccCCCCCcceeecceE-------------EEEe
Q 045778 24 WSQPGEIGPANKAR--RLHQNLAPPLVHLKQGE-HL---WFKDSHNITRGSTPRGFIPVGTCL-------------TVKC 84 (132)
Q Consensus 24 ~~~~~~~GwL~Kqg--~~~k~WkrRwFvL~~~~-L~---yyk~~~~~~~~~~~~g~I~L~~~~-------------~v~~ 84 (132)
...+.++|||+-|- +.-+.|-+.||+-.... .+ -+..... -.-.+..++-|..|. -|.
T Consensus 262 p~p~t~eGYlY~QEK~~~g~sWvKyYC~Y~retk~~TMvp~~qk~g--~k~g~~~~~~lKsC~RRktdSIdKRFCFDve- 338 (812)
T KOG1451|consen 262 PTPSTKEGYLYMQEKSKIGKSWVKYYCVYSRETKIFTMVPANQKTG--TKMGQTATFKLKSCSRRKTDSIDKRFCFDVE- 338 (812)
T ss_pred CCCcccceeeeehhhhhccchhhhheeEeecccceEEEeecccCCC--CcCCCcceEEehhhccCcccccccceeeeee-
Confidence 35678999999874 45689999999986543 22 1222110 011233334455543 111
Q ss_pred ccCCceeEEEeccchhhhccchhhhhhh
Q 045778 85 AEDGEYTMYSVADTEKEKGERINSIGRA 112 (132)
Q Consensus 85 ~~~~~r~~~f~A~s~~e~~~Wi~aI~~~ 112 (132)
+++...++.++|=+++++..||.|+-.+
T Consensus 339 ~~erpgviTmQALSE~drrlWmeAMDG~ 366 (812)
T KOG1451|consen 339 VEERPGVITMQALSEKDRRLWMEAMDGA 366 (812)
T ss_pred ecccCCeeehHhhhhhHHHHHHHHhcCC
Confidence 1224457889999999999999998554
No 88
>KOG3727 consensus Mitogen inducible gene product (contains ERM and PH domains) [Cell cycle control, cell division, chromosome partitioning]
Probab=90.04 E-value=0.068 Score=46.14 Aligned_cols=80 Identities=13% Similarity=0.179 Sum_probs=51.1
Q ss_pred hhhcCCCeeeccccceeeeecccccccCCCCCcceeecceEEEEeccC---------------CceeEEEeccchhhhcc
Q 045778 40 HQNLAPPLVHLKQGEHLWFKDSHNITRGSTPRGFIPVGTCLTVKCAED---------------GEYTMYSVADTEKEKGE 104 (132)
Q Consensus 40 ~k~WkrRwFvL~~~~L~yyk~~~~~~~~~~~~g~I~L~~~~~v~~~~~---------------~~r~~~f~A~s~~e~~~ 104 (132)
.|..+|-||...+-.+.+|++..+. + ..|.+.|.+.+|...+..++ +...+|+.|++++....
T Consensus 372 ~Kg~kr~f~t~~dl~~~~~~s~~~s-~-~ap~~~i~l~gcev~~dV~~~~~k~~i~l~~~~~~~msEi~LRCd~E~QYA~ 449 (664)
T KOG3727|consen 372 LKGYKRYFFTFRDLHLSLYKSSEDS-R-GAPAISINLKGCEVTPDVNLSQQKYAIKLLVPTAEGMSEIWLRCDNEQQYAR 449 (664)
T ss_pred hhhhhhHHHHHHHHHHHHHhhHhhh-c-CCCCCchhhcCcccCCccccccccceEEEEeecCCccceeEEecCCHHHHHH
Confidence 5666666666665555555544321 2 57888888887743221111 56789999999999999
Q ss_pred chhhhhhhhhhhccccccc
Q 045778 105 RINSIGRAIVQHSRSVTES 123 (132)
Q Consensus 105 Wi~aI~~~i~~~~~~~~~~ 123 (132)
||.|-+- +..+++|.|+
T Consensus 450 WMAaCrL--ASKGktMADS 466 (664)
T KOG3727|consen 450 WMAACRL--ASKGKTMADS 466 (664)
T ss_pred HHHHhhH--hhcCCccccc
Confidence 9998643 3344555554
No 89
>PF15405 PH_5: Pleckstrin homology domain; PDB: 2Z0Q_A.
Probab=88.25 E-value=0.31 Score=34.54 Aligned_cols=24 Identities=13% Similarity=0.234 Sum_probs=19.3
Q ss_pred CceeEEEeccchhhhccchhhhhh
Q 045778 88 GEYTMYSVADTEKEKGERINSIGR 111 (132)
Q Consensus 88 ~~r~~~f~A~s~~e~~~Wi~aI~~ 111 (132)
.+..|.|.|+|+.+|++|+++|.+
T Consensus 110 ~~~~~TLyA~s~~~R~~W~e~I~~ 133 (135)
T PF15405_consen 110 KGYSYTLYASSAQARQKWLEKIEE 133 (135)
T ss_dssp G-EEEEEE-SSHHHHHHHHHHHHH
T ss_pred CceEEEEEeCCHHHHHHHHHHHHh
Confidence 345689999999999999999965
No 90
>KOG3523 consensus Putative guanine nucleotide exchange factor TIM [Signal transduction mechanisms]
Probab=87.55 E-value=0.36 Score=42.19 Aligned_cols=81 Identities=14% Similarity=0.124 Sum_probs=47.9
Q ss_pred CCcchhHhHhh--------------hhcCCCeeeccccceeeeecccc---cccCCCCCcceeecceEEE----------
Q 045778 30 IGPANKARRLH--------------QNLAPPLVHLKQGEHLWFKDSHN---ITRGSTPRGFIPVGTCLTV---------- 82 (132)
Q Consensus 30 ~GwL~Kqg~~~--------------k~WkrRwFvL~~~~L~yyk~~~~---~~~~~~~~g~I~L~~~~~v---------- 82 (132)
.-||.|+|... ..-+.-|+.|-++.|..-+.... .-.+..+++.|.+..|...
T Consensus 472 sRwLvk~GELt~l~~~~~s~~l~~k~~~~~vylfLFnD~Llitk~k~~~~f~V~Dya~r~~l~ve~~e~~~~lp~~~~~~ 551 (695)
T KOG3523|consen 472 SRWLVKRGELTQLVERRASPLLFSKRLSKTVYLFLFNDLLLITKKKSEGSFQVFDYAPRSLLQVEKCEPELKLPGGANSL 551 (695)
T ss_pred hhhhhhccccceeecccccchhhcccccceeeeeeecceeeEeeecCCCceEEeeccchhhhhhhhcCcccCCCCCCccc
Confidence 56777777531 12233477777777776654431 0123455555555544310
Q ss_pred ------------EeccCCceeEEEeccchhhhccchhhhh
Q 045778 83 ------------KCAEDGEYTMYSVADTEKEKGERINSIG 110 (132)
Q Consensus 83 ------------~~~~~~~r~~~f~A~s~~e~~~Wi~aI~ 110 (132)
..+.+..-.+.|.|+|..|+++||.|+.
T Consensus 552 ~~~~hlF~ltLl~N~~~~~~e~lL~a~s~Sd~~RWi~Al~ 591 (695)
T KOG3523|consen 552 SSRPHLFLLTLLSNHQGRQTELLLSAESQSDRQRWISALR 591 (695)
T ss_pred ccccceEEEehhhccCCCceeeeecCCchHHHHHHHHhcC
Confidence 0111144578899999999999999995
No 91
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=86.50 E-value=0.39 Score=42.00 Aligned_cols=85 Identities=14% Similarity=0.074 Sum_probs=58.5
Q ss_pred CCCCCcchhHhHhhhhcCCCeeeccccceeeeecccccccCCCCCcceeecceEEEEeccC----------------Cce
Q 045778 27 PGEIGPANKARRLHQNLAPPLVHLKQGEHLWFKDSHNITRGSTPRGFIPVGTCLTVKCAED----------------GEY 90 (132)
Q Consensus 27 ~~~~GwL~Kqg~~~k~WkrRwFvL~~~~L~yyk~~~~~~~~~~~~g~I~L~~~~~v~~~~~----------------~~r 90 (132)
..++||+.--...-..-||.|-.|+..++..|.+++ ...--..|+|+.+..|....+ ...
T Consensus 413 ~~kEGWmvHyt~~d~lRkrHYWrldsk~itlfqn~s----~~ryYkeIPLsEIl~v~~~~~~~~vp~~~~phcFEI~T~~ 488 (888)
T KOG4236|consen 413 KLKEGWMVHYTSKDNLRKRHYWRLDSKCITLFQNES----TNRYYKEIPLSEILSVSSNNGFSLVPAGTNPHCFEIRTAT 488 (888)
T ss_pred hhhcceEEEEechhhhhhhhhheeccceeEeeecCC----CceeEEeecHHHhheeeccCCcccCCCCCCCceEEEEeee
Confidence 467888764322223457788899999998888875 245567889887766544332 344
Q ss_pred eEEEeccch------------hhhccchhhhhhhhhh
Q 045778 91 TMYSVADTE------------KEKGERINSIGRAIVQ 115 (132)
Q Consensus 91 ~~~f~A~s~------------~e~~~Wi~aI~~~i~~ 115 (132)
+.||..+++ ...+.|-.||+.+++-
T Consensus 489 ~vyfVge~p~~~~~~~~g~g~d~a~~w~~ai~~alMp 525 (888)
T KOG4236|consen 489 TVYFVGENPSSTPGGESGVGLDAAQGWETAIQQALMP 525 (888)
T ss_pred EEEEecCCCCCCccccccccchhhccCchhhhhcccc
Confidence 678888773 4488999999888664
No 92
>KOG1170 consensus Diacylglycerol kinase [Lipid transport and metabolism]
Probab=86.36 E-value=0.051 Score=48.76 Aligned_cols=79 Identities=14% Similarity=0.093 Sum_probs=52.7
Q ss_pred CCCCcchhHhHhhhhcCCCeeeccccc-eeeeecccccccCCCCCcceeecceEEEEec-c---------CCceeEEEec
Q 045778 28 GEIGPANKARRLHQNLAPPLVHLKQGE-HLWFKDSHNITRGSTPRGFIPVGTCLTVKCA-E---------DGEYTMYSVA 96 (132)
Q Consensus 28 ~~~GwL~Kqg~~~k~WkrRwFvL~~~~-L~yyk~~~~~~~~~~~~g~I~L~~~~~v~~~-~---------~~~r~~~f~A 96 (132)
+..|-..++.+-...|++|++.+++.. ++|-+... +.. --.+++.....-.+. . .+.+++.+||
T Consensus 3 ~~rgl~~~~~ne~Ea~k~r~~~~k~~~~~~vakTa~----g~~-~~~~d~t~a~~~eSs~~n~~~sf~vi~~~rk~r~~a 77 (1099)
T KOG1170|consen 3 VTRGLDNDVDNEREAWKQSILRAKDRMPEKVAKTAS----GPL-FALLDLTSAHVAESSTNNPRPSFCVITPVRKHRLCA 77 (1099)
T ss_pred cccccccccccHHHHHHHHHHHHHHHHHHHHHhccC----Ccc-HHHHhcccccccccccCCCCCCeeEecccHHhhhhc
Confidence 467888888888899999999999987 44444442 111 122334332111110 0 1678889999
Q ss_pred cchhhhccchhhhhh
Q 045778 97 DTEKEKGERINSIGR 111 (132)
Q Consensus 97 ~s~~e~~~Wi~aI~~ 111 (132)
|+..++..||.+++.
T Consensus 78 dn~ke~e~wi~~~kt 92 (1099)
T KOG1170|consen 78 DNRKEMEKWINQSKT 92 (1099)
T ss_pred cchhHHHHhhccccc
Confidence 999999999999965
No 93
>cd01255 PH_TIAM TIAM Pleckstrin homology (PH) domain. TIAM Pleckstrin homology (PH) domain. TIAM (T-cell invasion and metastasis) is a guanine nucleotide exchange factor specific for RAC1. It consists of an N-terminal PH domain followed by Raf-like ras binding domain(RDB), a PDZ domain, a RhoGEF (DH) domain and a PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. This subfamily contains the alignment of the PH domain that follows the DH domain.
Probab=85.66 E-value=1.8 Score=31.35 Aligned_cols=30 Identities=10% Similarity=0.130 Sum_probs=26.8
Q ss_pred CceeEEEeccchhhhccchhhhhhhhhhhc
Q 045778 88 GEYTMYSVADTEKEKGERINSIGRAIVQHS 117 (132)
Q Consensus 88 ~~r~~~f~A~s~~e~~~Wi~aI~~~i~~~~ 117 (132)
++++|-||+.+++.++..+++|+..+.+..
T Consensus 129 pE~vfqLCcS~~E~k~~flK~Irsilre~~ 158 (160)
T cd01255 129 PEKVFVLCCSTAESRNAFLKTIRSILRESV 158 (160)
T ss_pred CcceEEEecCCHHHHHHHHHHHHHHHHHHh
Confidence 889999999999999999999998776543
No 94
>cd05394 RasGAP_RASA2 RASA2 (or GAP1(m)) is a member of the GAP1 family of Ras GTPase-activating proteins that includes GAP1_IP4BP (or RASA3), CAPRI, and RASAL. In vitro, RASA2 has been shown to bind inositol 1,3,4,5-tetrakisphosphate (IP4), the water soluble inositol head group of the lipid second messenger phosphatidylinositol 3,4,5-trisphosphate (PIP3). In vivo studies also demonstrated that RASA2 binds PIP3, and it is recruited to the plasma membrane following agonist stimulation of PI 3-kinase. Furthermore, the membrane translocation is a consequence of the ability of its pleckstrin homology (PH) domain to bind PIP3.
Probab=84.69 E-value=0.24 Score=40.03 Aligned_cols=28 Identities=18% Similarity=0.081 Sum_probs=21.3
Q ss_pred cCCCCCCcchhHh--H---hhhhcCCCeeeccc
Q 045778 25 SQPGEIGPANKAR--R---LHQNLAPPLVHLKQ 52 (132)
Q Consensus 25 ~~~~~~GwL~Kqg--~---~~k~WkrRwFvL~~ 52 (132)
.-..++|+|.|+. . .++++|+|||.|..
T Consensus 281 ~~~~~e~~~~~r~~~~~~~~~~~~kkr~~~l~~ 313 (313)
T cd05394 281 PVHLKEGEMYKRAQGRTRIGKKNFKKRWFCLTS 313 (313)
T ss_pred chhhHHHHHHhhccCCCccccccchhheeecCC
Confidence 3358899999974 2 34789999999863
No 95
>cd05134 RasGAP_RASA3 RASA3 (or GAP1_IP4BP) is a member of the GAP1 family and has been shown to specifically bind 1,3,4,5-tetrakisphosphate (IP4). Thus, RASA3 may function as an IP4 receptor. The members of GAP1 family are characterized by a conserved domain structure comprising N-terminal tandem C2 domains, a highly conserved central RasGAP domain, and a C-terminal pleckstrin-homology domain that is associated with a Bruton's tyrosine kinase motif. Purified RASA3 stimulates GAP activity on Ras with about a five-fold lower potency than p120RasGAP, but shows no GAP-stimulating activity at all against Rac or Rab3A.
Probab=84.64 E-value=0.29 Score=39.49 Aligned_cols=26 Identities=19% Similarity=0.027 Sum_probs=20.1
Q ss_pred CCCCCcchhH--hH---hhhhcCCCeeeccc
Q 045778 27 PGEIGPANKA--RR---LHQNLAPPLVHLKQ 52 (132)
Q Consensus 27 ~~~~GwL~Kq--g~---~~k~WkrRwFvL~~ 52 (132)
..++|.|.|+ |. ..+++|||||.|.+
T Consensus 280 ~~~~~~~~~r~~~~~~~~~~~~k~r~~~lt~ 310 (310)
T cd05134 280 LLKEGFMIKRAQGRKRFGMKNFKKRWFRLTN 310 (310)
T ss_pred hhhhhhHHHhcccCCcccccchhheeeecCC
Confidence 4789999985 32 34789999999863
No 96
>KOG4424 consensus Predicted Rho/Rac guanine nucleotide exchange factor/faciogenital dysplasia protein 3 [Signal transduction mechanisms]
Probab=84.58 E-value=0.69 Score=40.20 Aligned_cols=82 Identities=10% Similarity=-0.002 Sum_probs=58.1
Q ss_pred CCcchhHhHhhhhcCCCeeecc---ccceeeeecccccccCCCCCcceeecceEEEEe----ccC---------CceeEE
Q 045778 30 IGPANKARRLHQNLAPPLVHLK---QGEHLWFKDSHNITRGSTPRGFIPVGTCLTVKC----AED---------GEYTMY 93 (132)
Q Consensus 30 ~GwL~Kqg~~~k~WkrRwFvL~---~~~L~yyk~~~~~~~~~~~~g~I~L~~~~~v~~----~~~---------~~r~~~ 93 (132)
.+.|.+--..-+.|+.-|++.- .-.++-|..+. +......|+|.+|....+ .+| ....++
T Consensus 500 ~s~l~~~~~~~~~g~~a~~~vP~~d~~~~~~Yg~~q----Dv~a~~~iPl~~~~v~~pe~~~~~D~~~~~k~~~s~~~~~ 575 (623)
T KOG4424|consen 500 CSHLKYMEAAGKTGILAWSVVPKSDPLVDYSYGSPQ----DVRAQATIPLPGVEVTIPEFVRREDLFHVFKLVQSHLSWH 575 (623)
T ss_pred hhhHHHHhhcCccceeeeeeccCCCCccccccCCcc----ccccccccccCccccCCCcccccchhcchhhhhhhcceee
Confidence 3455544334478999998884 23566777774 467788999999864211 112 566899
Q ss_pred Eeccchhhhccchhhhhhhhhh
Q 045778 94 SVADTEKEKGERINSIGRAIVQ 115 (132)
Q Consensus 94 f~A~s~~e~~~Wi~aI~~~i~~ 115 (132)
|.|++++-.+.|+..|..|...
T Consensus 576 ~~a~~~q~qq~wl~~l~~A~~~ 597 (623)
T KOG4424|consen 576 LAADDEQLQQRWLEVLLLAVSG 597 (623)
T ss_pred eccCCHHHHHHHHHHHHhhhcc
Confidence 9999999999999999887654
No 97
>cd05128 RasGAP_GAP1_like The GAP1 family of Ras GTPase-activating proteins includes GAP1(m) (or RASA2), GAP1_IP4BP (or RASA3), Ca2+ -promoted Ras inactivator (CAPRI, or RASAL4), and Ras GTPase activating-like proteins (RASAL) or RASAL1. The members are characterized by a conserved domain structure comprising N-terminal tandem C2 domains, a highly conserved central RasGAP domain, and a C-terminal pleckstrin homology domain that is associated with a Bruton's tyrosine kinase motif. While this domain structure is conserved, a small change in the function of each individual domain and the interaction between domains has a marked effect on the regulation of each protein.
Probab=83.96 E-value=0.32 Score=39.27 Aligned_cols=27 Identities=19% Similarity=0.047 Sum_probs=20.7
Q ss_pred cCCCCCCcchhHh--H---hhhhcCCCeeecc
Q 045778 25 SQPGEIGPANKAR--R---LHQNLAPPLVHLK 51 (132)
Q Consensus 25 ~~~~~~GwL~Kqg--~---~~k~WkrRwFvL~ 51 (132)
.-++++|++.|+. . ..+++|||||.|.
T Consensus 284 ~~~~k~g~~~~~~~~~~~~~~~~~k~r~~~lt 315 (315)
T cd05128 284 PVVLKEGFMIKRAQGRGRLGRKNFKKRYFRLT 315 (315)
T ss_pred chhhhhhhhHhhcccCCCccccchhheeeecC
Confidence 3358899999874 2 3578999999984
No 98
>KOG1264 consensus Phospholipase C [Lipid transport and metabolism]
Probab=83.10 E-value=0.77 Score=41.77 Aligned_cols=48 Identities=25% Similarity=0.263 Sum_probs=33.7
Q ss_pred CCCCcceeecceEEEEeccC---------------CceeEEEeccchhhhccchhhhhhhhhh
Q 045778 68 STPRGFIPVGTCLTVKCAED---------------GEYTMYSVADTEKEKGERINSIGRAIVQ 115 (132)
Q Consensus 68 ~~~~g~I~L~~~~~v~~~~~---------------~~r~~~f~A~s~~e~~~Wi~aI~~~i~~ 115 (132)
+..+|+.|+..+..+..... +...|.|+|++.+|..+|+++|+.+...
T Consensus 850 tl~rgi~d~~~~nvv~~~q~~n~~~~vf~l~~~~~~~~~~~~aadsqEe~~eW~k~i~E~t~~ 912 (1267)
T KOG1264|consen 850 TLCRGILDLNTYNVVKAPQGKNQKSFVFILEPKWQGKPPVEFAADSQEELFEWFKSIREITWK 912 (1267)
T ss_pred hhhhccccccccceeecccccCCcceEEEechhhhcCCceEEecCchHHHHHHHHHHHHHHHH
Confidence 34456667776655543221 5567889999999999999999776443
No 99
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=80.25 E-value=1.9 Score=37.48 Aligned_cols=78 Identities=18% Similarity=0.196 Sum_probs=51.1
Q ss_pred CCCCCcchhHhHhhhhcCCCeeecccc-ceeeeecccccccCCCCCcceeecceEEEEeccC-------CceeEEEeccc
Q 045778 27 PGEIGPANKARRLHQNLAPPLVHLKQG-EHLWFKDSHNITRGSTPRGFIPVGTCLTVKCAED-------GEYTMYSVADT 98 (132)
Q Consensus 27 ~~~~GwL~Kqg~~~k~WkrRwFvL~~~-~L~yyk~~~~~~~~~~~~g~I~L~~~~~v~~~~~-------~~r~~~f~A~s 98 (132)
+.+.|.|.|+...+ =+||.|+|..+ +|+|+.-.+ ...+|.|++..+..+.-... +.++|+|-- =
T Consensus 451 i~k~~~l~k~~~lf--~rkr~lllTn~~rll~~~~~~-----~~lk~eip~~~~~~~e~~n~~~~~i~TP~k~~~l~d-~ 522 (604)
T KOG0592|consen 451 ILKEGALEKRQGLF--ARKRMLLLTNGPRLLYVDPQN-----LVLKGEIPWSPDLRVELKNSSTFFIHTPNKVYYLED-P 522 (604)
T ss_pred HHhHHHHHhhhhhh--hceeEEEecCCCeEEEEeccc-----ceeccccccCcccceeeccCcceEEECCccceeccC-c
Confidence 46678888875544 46799999855 566666443 45678888876543322111 667777653 4
Q ss_pred hhhhccchhhhhhh
Q 045778 99 EKEKGERINSIGRA 112 (132)
Q Consensus 99 ~~e~~~Wi~aI~~~ 112 (132)
+.....|..||...
T Consensus 523 ~~~as~w~~ai~~~ 536 (604)
T KOG0592|consen 523 EQRASVWCKAIETV 536 (604)
T ss_pred ccchhHHHHhhhhh
Confidence 55677999999776
No 100
>KOG3549 consensus Syntrophins (type gamma) [Extracellular structures]
Probab=78.05 E-value=1.6 Score=36.15 Aligned_cols=79 Identities=19% Similarity=0.198 Sum_probs=54.9
Q ss_pred CCCCCcchhH--hH-hhhhcCCCeeeccccceeeeecccccccCCCCCcceeecc-------------------------
Q 045778 27 PGEIGPANKA--RR-LHQNLAPPLVHLKQGEHLWFKDSHNITRGSTPRGFIPVGT------------------------- 78 (132)
Q Consensus 27 ~~~~GwL~Kq--g~-~~k~WkrRwFvL~~~~L~yyk~~~~~~~~~~~~g~I~L~~------------------------- 78 (132)
++.-||..-+ +. .-...++||..|+|.++|.|..+- ..+.+...
T Consensus 281 ivyMGWvne~~q~~~s~q~y~P~FLaLkG~~~y~F~tPP--------v~t~dw~rAe~ty~vye~mfki~Kdsd~~D~R~ 352 (505)
T KOG3549|consen 281 IVYMGWVNEGVQNNISWQSYKPRFLALKGTEVYLFETPP--------VNTADWSRAEVTYKVYETMFKIVKDSDTVDSRQ 352 (505)
T ss_pred EEEeeeccccccCcccccccCceeEEecCcEEEEEcCCC--------cchhhhhhhhhhHHHHHHHHHHhcccccccccc
Confidence 4556887653 33 346789999999999999998772 22222221
Q ss_pred -eEEEEeccCCceeEEEeccchhhhccchhhhhhhhhh
Q 045778 79 -CLTVKCAEDGEYTMYSVADTEKEKGERINSIGRAIVQ 115 (132)
Q Consensus 79 -~~~v~~~~~~~r~~~f~A~s~~e~~~Wi~aI~~~i~~ 115 (132)
|.++++ ..++..||..+...|...|=++.++++..
T Consensus 353 ~CF~~qs--~~ge~~yfsVEl~seLa~wE~sfq~Atf~ 388 (505)
T KOG3549|consen 353 HCFLLQS--SGGEPRYFSVELRSELARWENSFQAATFT 388 (505)
T ss_pred ceEEEEc--CCCCceEEEEehhhHHHHHHHHHhhHHhH
Confidence 111111 16778899999999999999999988653
No 101
>KOG2070 consensus Guanine nucleotide exchange factor [Nucleotide transport and metabolism]
Probab=74.55 E-value=3 Score=36.03 Aligned_cols=66 Identities=15% Similarity=0.192 Sum_probs=43.5
Q ss_pred CCCeeeccccceeeeecccccccCCCCCcceeecceEEEEeccC-------------CceeEEEeccchhhhccchhhhh
Q 045778 44 APPLVHLKQGEHLWFKDSHNITRGSTPRGFIPVGTCLTVKCAED-------------GEYTMYSVADTEKEKGERINSIG 110 (132)
Q Consensus 44 krRwFvL~~~~L~yyk~~~~~~~~~~~~g~I~L~~~~~v~~~~~-------------~~r~~~f~A~s~~e~~~Wi~aI~ 110 (132)
+-|||+|--+.|+++.-..++ ...--.|-+++++.. |...++ .-..+...+.++.+.++|+.+++
T Consensus 326 ~dRy~~LF~~~llflsvs~rM-s~fIyegKlp~tG~i-V~klEdte~~~nafeis~~ti~rIv~~c~~~~~l~~wve~ln 403 (661)
T KOG2070|consen 326 KDRYLLLFPNVLLFLSVSPRM-SGFIYEGKLPTTGMI-VTKLEDTENHRNAFEISGSTIERIVVSCNNQQDLQEWVEHLN 403 (661)
T ss_pred hhheeeeccceeeeeEecccc-chhhhccccccceeE-EeehhhhhcccccccccccchhheeeccCChHHHHHHHHHhh
Confidence 489999998888877655322 122234667777753 332222 12234568999999999999998
Q ss_pred h
Q 045778 111 R 111 (132)
Q Consensus 111 ~ 111 (132)
.
T Consensus 404 ~ 404 (661)
T KOG2070|consen 404 K 404 (661)
T ss_pred h
Confidence 6
No 102
>PF04714 BCL_N: BCL7, N-terminal conserver region; InterPro: IPR006804 The members of this group of sequences contain a conserved N-terminal domain which is found in the BCL7 family. The function of BCL7 proteins is unknown, though they may be involved in early development. Notably, BCL7B is commonly hemizygously deleted in patients with Williams syndrome [].
Probab=74.02 E-value=3.4 Score=24.59 Aligned_cols=22 Identities=9% Similarity=0.036 Sum_probs=19.5
Q ss_pred HhhhhcCCCeeeccccceeeee
Q 045778 38 RLHQNLAPPLVHLKQGEHLWFK 59 (132)
Q Consensus 38 ~~~k~WkrRwFvL~~~~L~yyk 59 (132)
..++.|.++|+.+.+..|..|+
T Consensus 25 ekVr~wEKKWVtv~dtslriyK 46 (52)
T PF04714_consen 25 EKVRKWEKKWVTVGDTSLRIYK 46 (52)
T ss_pred HHHHHHhhceEEeccceEEEEE
Confidence 4568999999999999999887
No 103
>cd05135 RasGAP_RASAL Ras GTPase activating-like protein (RASAL) or RASAL1 is a member of the GAP1 family, and a Ca2+ sensor responding in-phase to repetitive Ca2+ signals by associating with the plasma membrane and deactivating Ras. It contains a conserved domain structure comprising N-terminal tandem C2 domains, a highly conserved central RasGAP domain, and a C-terminal pleckstrin-homology domain that is associated with a Bruton's tyrosine kinase motif. RASAL, like Ca2+ -promoted Ras inactivator (CAPRI, or RASAL4), is a cytosolic protein that undergoes a rapid translocation to the plasma membrane in response to receptor-mediated elevation in the concentration of intracellular free Ca2+, a translocation that activates its ability to function as a RasGAP. However, unlike RASAL4, RASAL undergoes an oscillatory translocation to the plasma membrane that occurs in synchrony with repetitive Ca2+ spikes.
Probab=71.33 E-value=1.3 Score=36.03 Aligned_cols=25 Identities=12% Similarity=0.053 Sum_probs=18.5
Q ss_pred CCCCCcchhHhH------hhhhcCCCeeecc
Q 045778 27 PGEIGPANKARR------LHQNLAPPLVHLK 51 (132)
Q Consensus 27 ~~~~GwL~Kqg~------~~k~WkrRwFvL~ 51 (132)
..++|+|.|+-. ....||+|||.|.
T Consensus 303 ~~~eg~~~~r~~~~~~~~~~~~fkk~~f~l~ 333 (333)
T cd05135 303 TVKEGYLHKRKTEGPQLLTRFAFKKRYFWLS 333 (333)
T ss_pred hhhhhHhhhccccCCCCcccccccceeeecC
Confidence 478999999642 2235999999884
No 104
>KOG0517 consensus Beta-spectrin [Cytoskeleton]
Probab=68.77 E-value=0.41 Score=46.56 Aligned_cols=103 Identities=13% Similarity=0.079 Sum_probs=63.5
Q ss_pred CCCCCCCcCceee--ecC--CCCCCcchhH---hH-----hhhhcCCCeeeccccceeeeecccccccC--CCCCcceee
Q 045778 11 QDPNPVDYKGIEF--WSQ--PGEIGPANKA---RR-----LHQNLAPPLVHLKQGEHLWFKDSHNITRG--STPRGFIPV 76 (132)
Q Consensus 11 ~~~~~~~~~~~~~--~~~--~~~~GwL~Kq---g~-----~~k~WkrRwFvL~~~~L~yyk~~~~~~~~--~~~~g~I~L 76 (132)
+.+.|.++....- ++. ..++|+|+.+ |. ..+.|..=|++|..+.|.+|+|......+ ...+|..+|
T Consensus 2279 ~~~~p~~~~~~~r~~~~~~w~~~eG~L~Rk~~~~A~e~k~~nRsw~~vy~~i~e~el~fykD~k~~~a~ve~~~r~e~~l 2358 (2473)
T KOG0517|consen 2279 QATLPARTQEQDRSRLNSAWRQLEGFLYRKHLLGALEIKASNRSWDNVYCRIREKELGFYKDAKKDLASVELLVRGEPPL 2358 (2473)
T ss_pred cCCCCccccccccccCCcHHHHHHhHHHHHHHHhhhhhhhhcccHHHHHHHHHhccchhhcccCcccccchhhccCCcch
Confidence 4455665544322 122 2678999764 21 23678888999999999889998521000 122333333
Q ss_pred c--ceEEEEec-------------cCCceeEEEeccchhhhccchhhhhhhhh
Q 045778 77 G--TCLTVKCA-------------EDGEYTMYSVADTEKEKGERINSIGRAIV 114 (132)
Q Consensus 77 ~--~~~~v~~~-------------~~~~r~~~f~A~s~~e~~~Wi~aI~~~i~ 114 (132)
+ .+. +... ..++..|.|.|.++++|+.|+.++..++.
T Consensus 2359 el~~a~-i~~a~dy~kkk~v~~l~~~~gae~llq~k~ee~m~sWL~~~a~~~~ 2410 (2473)
T KOG0517|consen 2359 ELDMAA-IEVASDYHKKKHVFLLQLPPGAEHLLQAKDEEEMESWLRALAVKRA 2410 (2473)
T ss_pred hcchhH-HHHHHHHHHHhHhhhhcCCchHHHHHhhccHHHHHHHHHHHHHHHH
Confidence 2 111 1100 11778899999999999999999977765
No 105
>KOG3520 consensus Predicted guanine nucleotide exchange factor [Signal transduction mechanisms]
Probab=64.31 E-value=3.8 Score=38.48 Aligned_cols=31 Identities=26% Similarity=0.294 Sum_probs=26.8
Q ss_pred CceeEEEeccchhhhccchhhhhhhhhhhcc
Q 045778 88 GEYTMYSVADTEKEKGERINSIGRAIVQHSR 118 (132)
Q Consensus 88 ~~r~~~f~A~s~~e~~~Wi~aI~~~i~~~~~ 118 (132)
+..-|-+.|.|..|++.||+.|+.++....+
T Consensus 696 ~pqmYEL~a~T~serntW~~li~~~v~s~~~ 726 (1167)
T KOG3520|consen 696 GPEMYELVAQSKSERNTWIQLIQDAVASCPR 726 (1167)
T ss_pred CCeeEEEecCCHHHHHHHHHHHHHHHHhCCc
Confidence 5678999999999999999999998876443
No 106
>KOG4407 consensus Predicted Rho GTPase-activating protein [General function prediction only]
Probab=59.38 E-value=0.99 Score=42.92 Aligned_cols=93 Identities=12% Similarity=0.034 Sum_probs=60.7
Q ss_pred eeeecCCCCCCcchh------H----hHhhhhcCCCeeeccccceeeeecccccccCCCCCcc------------eeecc
Q 045778 21 IEFWSQPGEIGPANK------A----RRLHQNLAPPLVHLKQGEHLWFKDSHNITRGSTPRGF------------IPVGT 78 (132)
Q Consensus 21 ~~~~~~~~~~GwL~K------q----g~~~k~WkrRwFvL~~~~L~yyk~~~~~~~~~~~~g~------------I~L~~ 78 (132)
++.+.|..++|||+- + |..+..|++=|-+|.|+.|+.+++... ....+.+. +-+.+
T Consensus 917 ~e~Fsd~~megWly~~q~~SkkGk~tGssLr~wk~~y~~l~ghsl~L~ss~re--~~~~~aas~as~~~st~tts~c~ns 994 (1973)
T KOG4407|consen 917 IELFSDSEMEGWLYVLQSSSKKGKATGSSLREWKLSYTGLHGHSLVLNSSARE--HNSQSAASLASSSCSTATTSECLNS 994 (1973)
T ss_pred hhhhhhhhhhcceeeeeecccCCcccCcchhhhhhHHHHhccccceecccccc--cCcchhhhhcccccccccCcccccc
Confidence 445688999999873 2 456789999999999999999988741 11122221 22233
Q ss_pred eEEEEec-cC-----------CceeEEEeccchhhhccchhhhhhhhhh
Q 045778 79 CLTVKCA-ED-----------GEYTMYSVADTEKEKGERINSIGRAIVQ 115 (132)
Q Consensus 79 ~~~v~~~-~~-----------~~r~~~f~A~s~~e~~~Wi~aI~~~i~~ 115 (132)
|.+...- +. ..-.+.|.|++.++|-.|++.++.....
T Consensus 995 cltdI~ysetkrn~vfRLTt~d~ce~lfqaeDrddmlgG~~ttq~St~~ 1043 (1973)
T KOG4407|consen 995 CLTDIQYSETKRNQVFRLTTNDLCEGLFQAEDRDDMLGGLSTTQSSTTE 1043 (1973)
T ss_pred chhhhhhhhhhhhhHHHhHHHHHHhHhhccCccccccchhhhhhhcccc
Confidence 3221000 00 2245789999999999999998765443
No 107
>PF15277 Sec3-PIP2_bind: Exocyst complex component SEC3 N-terminal PIP2 binding PH; PDB: 3HIE_D 3A58_E.
Probab=57.08 E-value=17 Score=23.93 Aligned_cols=26 Identities=27% Similarity=0.200 Sum_probs=22.3
Q ss_pred CceeEEEeccchhhhccchhhhhhhh
Q 045778 88 GEYTMYSVADTEKEKGERINSIGRAI 113 (132)
Q Consensus 88 ~~r~~~f~A~s~~e~~~Wi~aI~~~i 113 (132)
-+++|+..|+|.+|+...|..|-...
T Consensus 63 ~~k~y~W~a~s~~Ek~~Fi~~L~k~~ 88 (91)
T PF15277_consen 63 FDKPYYWEASSAKEKNTFIRSLWKLY 88 (91)
T ss_dssp SSSEEEEEESSHHHHHHHHHHHHHHH
T ss_pred ECCCcEEEeCCHHHHHHHHHHHHHHh
Confidence 45699999999999999999986544
No 108
>KOG3531 consensus Rho guanine nucleotide exchange factor CDEP [Signal transduction mechanisms]
Probab=56.80 E-value=9.6 Score=34.93 Aligned_cols=85 Identities=19% Similarity=0.198 Sum_probs=58.9
Q ss_pred CCCCcchhHhHhhhhcCCCeeeccccceeeeecccccccCCCCCcceeecceEEEEeccC------------CceeEEEe
Q 045778 28 GEIGPANKARRLHQNLAPPLVHLKQGEHLWFKDSHNITRGSTPRGFIPVGTCLTVKCAED------------GEYTMYSV 95 (132)
Q Consensus 28 ~~~GwL~Kqg~~~k~WkrRwFvL~~~~L~yyk~~~~~~~~~~~~g~I~L~~~~~v~~~~~------------~~r~~~f~ 95 (132)
.+.|=|.|-.. |.-++|-|.|-.+.|.|-.+.-+..+.....|-|++. .++...++ ..+..+.+
T Consensus 751 ir~g~llK~sk--kgLqqrmfFLfsdillytsk~~~~~~~fri~g~lP~~--l~~en~en~~s~p~~~ti~~~qk~i~vs 826 (1036)
T KOG3531|consen 751 IRSGCLLKLSK--KGLQQRMFFLFSDILLYTSKGPDVQKCFRINGDLPLT--LTMENSENEWSVPHCFTISGAQKQIYVS 826 (1036)
T ss_pred hhcCCchhhcc--ccchhhhhhhhhhhheeccCCCChhheeEeccCCceE--eeeecccccccCCceEEEeccceEEEEe
Confidence 45677777542 4567887777777666654332233445667888887 34444443 67788999
Q ss_pred ccchhhhccchhhhhhhhhhh
Q 045778 96 ADTEKEKGERINSIGRAIVQH 116 (132)
Q Consensus 96 A~s~~e~~~Wi~aI~~~i~~~ 116 (132)
|.+..+.+.|...++.+|...
T Consensus 827 ast~~~sk~~~~~r~~~i~~~ 847 (1036)
T KOG3531|consen 827 ASTRRESKKWEFDRRKAIDLA 847 (1036)
T ss_pred ccchhhhhhhhhccchhhhhc
Confidence 999999999999998888643
No 109
>PF15411 PH_10: Pleckstrin homology domain
Probab=56.00 E-value=13 Score=25.69 Aligned_cols=69 Identities=12% Similarity=-0.005 Sum_probs=42.4
Q ss_pred hhcCCCeeeccccceeeeecccccccC---------------CCCCcceeecceEEEEecc--------------CCcee
Q 045778 41 QNLAPPLVHLKQGEHLWFKDSHNITRG---------------STPRGFIPVGTCLTVKCAE--------------DGEYT 91 (132)
Q Consensus 41 k~WkrRwFvL~~~~L~yyk~~~~~~~~---------------~~~~g~I~L~~~~~v~~~~--------------~~~r~ 91 (132)
..|+...+-|=...|..++........ -..+|.|.+.....+.+.. +....
T Consensus 19 ~~erE~~vYLFe~illc~kE~~~~~~~~~~~~~~~~~~~~~~L~LKGrI~i~~i~~v~~~s~~g~~~L~i~w~~d~e~~~ 98 (116)
T PF15411_consen 19 DSEREYEVYLFEKILLCCKEVKPKKKKSKQISSKKKKKKKTKLQLKGRIYISNITEVSSSSKPGSYSLQISWKGDPELEN 98 (116)
T ss_pred CcceeeeeeeeeeeEEEEecCccCccchhhcccccccCCCceEEEeeEEEEEeeeeeeccCCCCceEEEEEEcCCCCCce
Confidence 457777777777777777765421110 0124566555432222111 14568
Q ss_pred EEEeccchhhhccchhhh
Q 045778 92 MYSVADTEKEKGERINSI 109 (132)
Q Consensus 92 ~~f~A~s~~e~~~Wi~aI 109 (132)
|.|...|++.++.|-.+|
T Consensus 99 F~lrf~nee~l~~W~~~L 116 (116)
T PF15411_consen 99 FTLRFRNEEQLEQWRSAL 116 (116)
T ss_pred EEEEeCCHHHHHHHHhhC
Confidence 999999999999998876
No 110
>KOG4095 consensus Uncharacterized conserved protein (tumor-specific protein BCL7 in humans) [General function prediction only]
Probab=51.29 E-value=10 Score=27.64 Aligned_cols=21 Identities=10% Similarity=0.023 Sum_probs=19.1
Q ss_pred hhhhcCCCeeeccccceeeee
Q 045778 39 LHQNLAPPLVHLKQGEHLWFK 59 (132)
Q Consensus 39 ~~k~WkrRwFvL~~~~L~yyk 59 (132)
.++.|-++|+.+.+..|.+||
T Consensus 27 KVRrWEKKwVtvgDTslRIyK 47 (165)
T KOG4095|consen 27 KVRRWEKKWVTVGDTSLRIYK 47 (165)
T ss_pred HHHHHhhheEeecccceEEEE
Confidence 468999999999999999997
No 111
>PF05117 DUF695: Family of unknown function (DUF695) ; InterPro: IPR016097 This entry is found at the N terminus of a number of proteobacterial proteins of unknown function.
Probab=45.47 E-value=29 Score=23.94 Aligned_cols=41 Identities=17% Similarity=0.263 Sum_probs=29.8
Q ss_pred CceeEEEeccchhhhccchhhhhhhhhhhccccccceeeeccCCC
Q 045778 88 GEYTMYSVADTEKEKGERINSIGRAIVQHSRSVTESEVVEYDSKW 132 (132)
Q Consensus 88 ~~r~~~f~A~s~~e~~~Wi~aI~~~i~~~~~~~~~~~~~~~~~~~ 132 (132)
+.|.+||.+.+.. .+.++|..++.+. ....-.-.+..|+.|
T Consensus 88 g~r~~~fY~~d~~---~~~~~l~~~l~~~-~~y~~~~~~~~Dp~W 128 (136)
T PF05117_consen 88 GRREFYFYCKDPE---KFEEVLNEALAQF-PEYPIEINVQEDPDW 128 (136)
T ss_pred CEEEEEEEECChh---HHHHHHHHHHHhC-CCcceEEEEEECcCH
Confidence 7899999998776 6677888877765 233334478888887
No 112
>KOG1264 consensus Phospholipase C [Lipid transport and metabolism]
Probab=42.80 E-value=7.8 Score=35.63 Aligned_cols=36 Identities=6% Similarity=0.014 Sum_probs=31.0
Q ss_pred CCCCCCcchhHhHhhhhcCCCeeeccccceeeeecc
Q 045778 26 QPGEIGPANKARRLHQNLAPPLVHLKQGEHLWFKDS 61 (132)
Q Consensus 26 ~~~~~GwL~Kqg~~~k~WkrRwFvL~~~~L~yyk~~ 61 (132)
+.+++|.|+-+...-+.|-+.||||....|+|-...
T Consensus 474 nsvk~GiLy~kd~vdheWt~h~fvlt~~kl~ys~e~ 509 (1267)
T KOG1264|consen 474 NSVKQGILYMKDPVDHEWTRHYFVLTDAKLSYSDEI 509 (1267)
T ss_pred hhhhcceEEEecCCCCceeeeEEEEecceeEeehhc
Confidence 447899999888888999999999999999987544
No 113
>KOG3551 consensus Syntrophins (type beta) [Extracellular structures]
Probab=38.00 E-value=35 Score=28.83 Aligned_cols=29 Identities=17% Similarity=0.158 Sum_probs=25.3
Q ss_pred CceeEEEeccchhhhccchhhhhhhhhhh
Q 045778 88 GEYTMYSVADTEKEKGERINSIGRAIVQH 116 (132)
Q Consensus 88 ~~r~~~f~A~s~~e~~~Wi~aI~~~i~~~ 116 (132)
+..+.+|.|.+..+...|..||..+++..
T Consensus 246 g~~tliLR~kdsa~A~~Wf~AiHa~v~~l 274 (506)
T KOG3551|consen 246 GRHTLILRAKDSAEADSWFEAIHANVNTL 274 (506)
T ss_pred CcceEEEEccCcHHHHHHHHHHHHHHhhH
Confidence 66788999999999999999998877653
No 114
>PF08458 PH_2: Plant pleckstrin homology-like region; InterPro: IPR013666 This domain describes a pleckstrin homology (PH)-like region found in several plant proteins of unknown function.
Probab=36.39 E-value=30 Score=23.83 Aligned_cols=29 Identities=14% Similarity=0.144 Sum_probs=23.5
Q ss_pred CceeEEEeccchhhhccchhhhhhhhhhh
Q 045778 88 GEYTMYSVADTEKEKGERINSIGRAIVQH 116 (132)
Q Consensus 88 ~~r~~~f~A~s~~e~~~Wi~aI~~~i~~~ 116 (132)
..+.+-|-++|..+.+.|++.|+.-+...
T Consensus 78 ~~G~vEfec~~~~~~k~W~~gI~~mL~~~ 106 (110)
T PF08458_consen 78 AQGVVEFECDSQREYKRWVQGIQHMLSQV 106 (110)
T ss_pred cCcEEEEEeCChhhHHHHHHHHHHHHHHh
Confidence 45567788999999999999998776553
No 115
>PF12213 Dpoe2NT: DNA polymerases epsilon N terminal; InterPro: IPR024639 This domain is found in the N-terminal of DNA polymerase epsilon subunit B proteins. It contains a single completely conserved phenylalanine residue that may be functionally important. It forms a primarily alpha helical structure in which four helices are arranged in two hairpins with connecting loops containing beta strands which form a short parallel sheet. DNA polymerase epsilon is required in DNA replication for synthesis of the leading strand. The N-terminal domain has close structural relation to AAA+ protein C-terminal domains [].; PDB: 2V6Z_M.
Probab=32.97 E-value=11 Score=23.90 Aligned_cols=21 Identities=19% Similarity=0.335 Sum_probs=16.2
Q ss_pred ccchhhhccchhhhhhhhhhh
Q 045778 96 ADTEKEKGERINSIGRAIVQH 116 (132)
Q Consensus 96 A~s~~e~~~Wi~aI~~~i~~~ 116 (132)
--++.++++||..|..++.+.
T Consensus 34 ~~~~~e~e~~l~~Ii~~v~kq 54 (73)
T PF12213_consen 34 SLSEEEREDWLDKIIDAVQKQ 54 (73)
T ss_dssp TS-TTTHHHHHHHHHHHHTTS
T ss_pred cCCHHHHHHHHHHHHHHHhcC
Confidence 346778999999998888764
No 116
>COG5480 Predicted integral membrane protein [Function unknown]
Probab=32.92 E-value=25 Score=25.21 Aligned_cols=42 Identities=19% Similarity=0.248 Sum_probs=30.4
Q ss_pred eeecceEEEEeccCCceeEEEeccchhhhccchhhhhhhhhh
Q 045778 74 IPVGTCLTVKCAEDGEYTMYSVADTEKEKGERINSIGRAIVQ 115 (132)
Q Consensus 74 I~L~~~~~v~~~~~~~r~~~f~A~s~~e~~~Wi~aI~~~i~~ 115 (132)
|+-+.|.++...+-..|.||+.|++.+---+|-..|+.|+.+
T Consensus 65 v~~~~Cv~~ie~~lt~ry~ylyA~d~~~~a~~~Gsi~mCv~~ 106 (147)
T COG5480 65 VEASECVTLIEGELTSRYYYLYAEDAKGGARWAGSINMCVAE 106 (147)
T ss_pred ecCceeEEEecccceeeEEeEEccchhcCcEecCceeEEEec
Confidence 334455544333336899999999999999999888877654
No 117
>cd05395 RasGAP_RASA4 Ras GTPase activating-like 4 protein (RASAL4), also known as Ca2+ -promoted Ras inactivator (CAPRI), is a member of the GAP1 family. Members of the GAP1 family are characterized by a conserved domain structure comprising N-terminal tandem C2 domains, a highly conserved central RasGAP domain, and a C-terminal pleckstrin-homology domain that is associated with a Bruton's tyrosine kinase motif. RASAL4, like RASAL, is a cytosolic protein that undergoes a rapid translocation to the plasma membrane in response to a receptor-mediated elevation in the concentration of intracellular free Ca2+ ([Ca2+]i). However, unlike RASAL, RASAL4 does not sense oscillations in [Ca2+]i.
Probab=29.96 E-value=14 Score=30.25 Aligned_cols=24 Identities=8% Similarity=-0.000 Sum_probs=17.3
Q ss_pred CCCCcch-hH--hH---hhhhcCCCeeecc
Q 045778 28 GEIGPAN-KA--RR---LHQNLAPPLVHLK 51 (132)
Q Consensus 28 ~~~GwL~-Kq--g~---~~k~WkrRwFvL~ 51 (132)
+++|.+. |+ |. ..++||+|||.|.
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 331 (337)
T cd05395 302 VKEGFLFLHRTKGKGPLMTSPFKKLYFTLT 331 (337)
T ss_pred HHHHHHHHHhccCCCCccccchhhheeeee
Confidence 4677666 54 32 3479999999997
No 118
>PLN02958 diacylglycerol kinase/D-erythro-sphingosine kinase
Probab=27.08 E-value=47 Score=28.30 Aligned_cols=30 Identities=0% Similarity=-0.093 Sum_probs=25.7
Q ss_pred CceeEEEeccchhhhccchhhhhhhhhhhc
Q 045778 88 GEYTMYSVADTEKEKGERINSIGRAIVQHS 117 (132)
Q Consensus 88 ~~r~~~f~A~s~~e~~~Wi~aI~~~i~~~~ 117 (132)
..+.|.|.+.+.+..+.|+++|+..+....
T Consensus 80 ~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 109 (481)
T PLN02958 80 ARKDFVFEPLSDESRRLWCQKLRDYLDSLG 109 (481)
T ss_pred eeeeEEEeCCCHHHHHHHHHHHHHHHhhcc
Confidence 457899999999999999999999876543
No 119
>PF06282 DUF1036: Protein of unknown function (DUF1036); InterPro: IPR009380 This entry consists of several hypothetical bacterial proteins of unknown function.
Probab=24.29 E-value=40 Score=23.07 Aligned_cols=47 Identities=21% Similarity=0.328 Sum_probs=30.6
Q ss_pred CCCcceee--cceEEEEeccCCceeEEEeccchhhhccchhhhhhhhhh
Q 045778 69 TPRGFIPV--GTCLTVKCAEDGEYTMYSVADTEKEKGERINSIGRAIVQ 115 (132)
Q Consensus 69 ~~~g~I~L--~~~~~v~~~~~~~r~~~f~A~s~~e~~~Wi~aI~~~i~~ 115 (132)
..+|.-.| ..|..+-...-..+.||+.|++...-..|-..+.-|+..
T Consensus 29 ~seGWw~i~pg~C~~v~~g~l~~~~~Y~yAe~~~~~~~w~G~~~~Cv~~ 77 (115)
T PF06282_consen 29 VSEGWWRIDPGECATVISGDLSNRYYYVYAEDTDGGGEWGGDIQFCVRE 77 (115)
T ss_pred EEeeeEEeCCCceEEecCCCccccEEEEEEEeCCCCcccCCCEEEeecC
Confidence 44665444 356555333336788888888877777888888777654
Done!