BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>045782
MRPNWELKQCCNHEQVVFLVTVSVCTVVILAVCLDFSQVLSLRYCHLNVESSRFVIFLGV
IWVLQETTDIRILRYIILFIGKCPHCMYDGADIYDDLISRRVHSSDAEKFAEVCPCPCNG
IGWGIIWGLISFFFLCGAMYFGLVILS

High Scoring Gene Products

Symbol, full name Information P value
AT1G67060 protein from Arabidopsis thaliana 5.3e-30

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  045782
        (147 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2019743 - symbol:AT1G67060 "AT1G67060" species...   285  5.3e-30   2
ASPGD|ASPL0000071635 - symbol:AN4854 species:162425 "Emer...    90  0.00094   1


>TAIR|locus:2019743 [details] [associations]
            symbol:AT1G67060 "AT1G67060" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0005886 "plasma membrane"
            evidence=IDA] EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
            eggNOG:NOG76042 HOGENOM:HOG000235024 EMBL:BT029386 EMBL:AK317440
            IPI:IPI00529725 RefSeq:NP_176877.2 UniGene:At.35696
            EnsemblPlants:AT1G67060.1 GeneID:843026 KEGG:ath:AT1G67060
            TAIR:At1g67060 InParanoid:A0JQ16 OMA:VIWGMIS PhylomeDB:A0JQ16
            ProtClustDB:CLSN2680779 Genevestigator:A0JQ16 Uniprot:A0JQ16
        Length = 234

 Score = 285 (105.4 bits), Expect = 5.3e-30, Sum P(2) = 5.3e-30
 Identities = 57/94 (60%), Positives = 68/94 (72%)

Query:    54 FVIFLGVIWVLQETTDIRILRYIILFIGKCPHCMYDGADIYDDLISRRVHSSDAEKFAEV 113
             F++FL VIWVLQE T ++ILRY+ILFIG   + ++   DIYDDLISRRVHSSDAEKFAE+
Sbjct:   143 FIVFLAVIWVLQELTTVKILRYVILFIGVM-NSLFSVYDIYDDLISRRVHSSDAEKFAEI 201

Query:   114 CPCPCNXXXXXXXXXXXSFFFLCGAMYFGLVILS 147
             CPC C            SF FLC ++Y GLVILS
Sbjct:   202 CPC-CTGCGWGVIWGMISFAFLCASLYLGLVILS 234

 Score = 62 (26.9 bits), Expect = 5.3e-30, Sum P(2) = 5.3e-30
 Identities = 9/13 (69%), Positives = 10/13 (76%)

Query:     3 PNWELKQCCNHEQ 15
             PNWEL+ CCN  Q
Sbjct:     4 PNWELRGCCNRNQ 16


>ASPGD|ASPL0000071635 [details] [associations]
            symbol:AN4854 species:162425 "Emericella nidulans"
            [GO:0008150 "biological_process" evidence=ND] [GO:0003674
            "molecular_function" evidence=ND] [GO:0005575 "cellular_component"
            evidence=ND] EMBL:BN001303 EMBL:AACD01000083 RefSeq:XP_662458.1
            EnsemblFungi:CADANIAT00005554 GeneID:2872648 KEGG:ani:AN4854.2
            eggNOG:NOG76042 HOGENOM:HOG000235024 OMA:LSHEETH OrthoDB:EOG4BS0VN
            Uniprot:Q5B3M6
        Length = 269

 Score = 90 (36.7 bits), Expect = 0.00094, P = 0.00094
 Identities = 20/40 (50%), Positives = 28/40 (70%)

Query:    73 LRYIILFIGKCPHCMYDGADIYDDLISRRVHSSDAEKFAE 112
             L++++LFIG     +Y   DI DDLI R+V+SSDA  FA+
Sbjct:   180 LKWVVLFIGVMS-ALYSVWDICDDLILRKVNSSDASVFAQ 218


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.333   0.145   0.495    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      147       118   0.00091  102 3  11 21  0.37    30
                                                     29  0.47    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  594 (63 KB)
  Total size of DFA:  147 KB (2089 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  8.86u 0.16s 9.02t   Elapsed:  00:00:00
  Total cpu time:  8.86u 0.16s 9.02t   Elapsed:  00:00:00
  Start:  Fri May 10 05:09:24 2013   End:  Fri May 10 05:09:24 2013

Back to top