BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 045782
         (147 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q59835|LSPA_STACT Lipoprotein signal peptidase OS=Staphylococcus carnosus (strain
           TM300) GN=lspA PE=3 SV=1
          Length = 159

 Score = 32.0 bits (71), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 14/37 (37%), Positives = 21/37 (56%)

Query: 109 KFAEVCPCPCNGIGWGIIWGLISFFFLCGAMYFGLVI 145
           KF  +     NG  WGI+ G +SFFF+   +  GL++
Sbjct: 43  KFLYITSHRNNGAAWGILSGRMSFFFIVTIVVLGLLV 79


>sp|O36028|ATCZ_SCHPO Putative phospholipid-transporting ATPase C4F10.16c
           OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
           GN=SPAC4F10.16c PE=3 SV=1
          Length = 1367

 Score = 29.6 bits (65), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 45/110 (40%), Gaps = 5/110 (4%)

Query: 27  VVILAVCLDFSQVLSLRYCHLNVESSRFVIFLGVIWVLQETTDIRILRYIILFIGKCPHC 86
           +++ A+CL FS VL   Y   N  S+R                I I   +ILF    P  
Sbjct: 492 LLLFAMCL-FSGVLRSIYSAQN-NSARVFELSKNSNTAPAHGIISIFTSLILFQNLVPIS 549

Query: 87  MYDGADIYDDLISRRVHSSDAEKFAEVCPCPCNGIGWGII--WGLISFFF 134
           +Y   DI   + S  + S D E + E   CPC+   W I    G I + F
Sbjct: 550 LYITMDIVRSIQSYFIFS-DREMYDEKLDCPCSPKSWNISDDLGQIEYIF 598


>sp|Q9NTW7|ZF64B_HUMAN Zinc finger protein 64 homolog, isoforms 3 and 4 OS=Homo sapiens
           GN=ZFP64 PE=2 SV=3
          Length = 645

 Score = 29.6 bits (65), Expect = 7.2,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 18/38 (47%)

Query: 82  KCPHCMYDGADIYDDLISRRVHSSDAEKFAEVCPCPCN 119
           KC HC + G D  D L   R+H +D  +    C   C+
Sbjct: 468 KCLHCAFQGRDRADLLEHSRLHQADHPEKCPECSYSCS 505


>sp|Q99KE8|ZFP64_MOUSE Zinc finger protein 64 OS=Mus musculus GN=Zfp64 PE=2 SV=1
          Length = 643

 Score = 29.3 bits (64), Expect = 7.6,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 18/38 (47%)

Query: 82  KCPHCMYDGADIYDDLISRRVHSSDAEKFAEVCPCPCN 119
           KC HC + G D  D L   R+H +D  +    C   C+
Sbjct: 466 KCLHCAFQGRDRADLLEHSRLHQADHPEKCPECSYSCS 503


>sp|Q82055|NSP4_ROTHC Non-structural glycoprotein 4 OS=Rotavirus C (isolate Human/United
           Kingdom/Bristol/1989) PE=3 SV=1
          Length = 150

 Score = 29.3 bits (64), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 13/89 (14%)

Query: 34  LDF-SQVLSLRYCHLNVESSRFVIFLGVIWVLQETTDIRILRYIILFIGKCPHCMYDGAD 92
           +DF +Q L  +Y   NV++  ++  LG+I  L  T   RILR+I  FI  C H +     
Sbjct: 1   MDFINQTLFSKYTESNVDTIPYL--LGLILAL--TNGSRILRFINSFIIICKHIVTTSKS 56

Query: 93  IYDDLISRRVHSSD------AEKFAEVCP 115
             D +  R++++S+       E++ EV  
Sbjct: 57  AIDKM--RKINNSEHNTKNAHEEYEEVMK 83


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.334    0.147    0.507 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,169,277
Number of Sequences: 539616
Number of extensions: 1810262
Number of successful extensions: 7439
Number of sequences better than 100.0: 9
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 7433
Number of HSP's gapped (non-prelim): 11
length of query: 147
length of database: 191,569,459
effective HSP length: 106
effective length of query: 41
effective length of database: 134,370,163
effective search space: 5509176683
effective search space used: 5509176683
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.6 bits)
S2: 55 (25.8 bits)