Query 045782
Match_columns 147
No_of_seqs 79 out of 81
Neff 3.8
Searched_HMMs 13730
Date Mon Mar 25 09:09:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045782.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/045782hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ek0a_ c.37.1.8 (A:) Ypt51 {B 29.1 5.4 0.00039 26.4 -0.0 30 92-121 119-151 (170)
2 d2g3ya1 c.37.1.8 (A:73-244) GT 27.7 6.8 0.00049 26.3 0.3 26 92-120 122-150 (172)
3 d1ctqa_ c.37.1.8 (A:) cH-p21 R 21.2 11 0.00082 24.7 0.4 26 95-120 118-146 (166)
4 d1qsma_ d.108.1.1 (A:) Histone 20.8 9.6 0.0007 24.2 -0.0 20 95-114 1-20 (150)
5 d2erxa1 c.37.1.8 (A:6-176) di- 19.5 15 0.0011 24.0 0.8 22 99-120 123-147 (171)
6 d2ivya1 d.58.58.1 (A:2-89) Hyp 18.3 14 0.001 24.0 0.3 22 90-116 7-28 (88)
7 d1z06a1 c.37.1.8 (A:32-196) Ra 17.6 26 0.0019 22.5 1.7 35 76-120 111-148 (165)
8 d2ew1a1 c.37.1.8 (A:4-174) Rab 17.0 24 0.0018 23.0 1.4 26 95-120 121-149 (171)
9 d1wmsa_ c.37.1.8 (A:) Rab9a {H 15.9 23 0.0017 23.2 1.0 29 97-125 127-160 (174)
10 d1z08a1 c.37.1.8 (A:17-183) Ra 15.0 26 0.0019 22.8 1.1 22 99-120 123-147 (167)
No 1
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=29.15 E-value=5.4 Score=26.42 Aligned_cols=30 Identities=23% Similarity=0.211 Sum_probs=25.1
Q ss_pred eehhhhhhhhcCCCcHHHHHHHCCCC---CCCc
Q 045782 92 DIYDDLISRRVHSSDAEKFAEVCPCP---CNGI 121 (147)
Q Consensus 92 DI~DDlI~Rkvn~SDA~~fA~l~~~~---~~s~ 121 (147)
|..||.-.|.+..+++.+||+..++| ||++
T Consensus 119 d~~~~~~~~~v~~~~~~~~~~~~~~~~~e~Sak 151 (170)
T d1ek0a_ 119 DMLQEGGERKVAREEGEKLAEEKGLLFFETSAK 151 (170)
T ss_dssp GGGGSSCCCCSCHHHHHHHHHHHTCEEEECCTT
T ss_pred ccccccchhhhhHHHHHHHHHHcCCEEEEecCC
Confidence 77777778999999999999998887 5663
No 2
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.71 E-value=6.8 Score=26.26 Aligned_cols=26 Identities=27% Similarity=0.373 Sum_probs=20.5
Q ss_pred eehhhhhhhhcCCCcHHHHHHHCCCC---CCC
Q 045782 92 DIYDDLISRRVHSSDAEKFAEVCPCP---CNG 120 (147)
Q Consensus 92 DI~DDlI~Rkvn~SDA~~fA~l~~~~---~~s 120 (147)
|.-++ |.++.+||.+||+..++| ||+
T Consensus 122 Dl~~~---~~v~~~~~~~~a~~~~~~~~e~Sa 150 (172)
T d2g3ya1 122 DLVRC---REVSVSEGRACAVVFDCKFIETSA 150 (172)
T ss_dssp TCGGG---CCSCHHHHHHHHHHHTCEEEECBT
T ss_pred ccccc---ccccHHHHHHHHHHcCCeEEEEeC
Confidence 55443 778899999999999987 555
No 3
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.18 E-value=11 Score=24.68 Aligned_cols=26 Identities=31% Similarity=0.395 Sum_probs=20.0
Q ss_pred hhhhhhhcCCCcHHHHHHHCCCC---CCC
Q 045782 95 DDLISRRVHSSDAEKFAEVCPCP---CNG 120 (147)
Q Consensus 95 DDlI~Rkvn~SDA~~fA~l~~~~---~~s 120 (147)
+|+-.|.+..+++.+||+..++| ||+
T Consensus 118 ~Dl~~~~~~~~~~~~~~~~~~~~~~e~Sa 146 (166)
T d1ctqa_ 118 CDLAARTVESRQAQDLARSYGIPYIETSA 146 (166)
T ss_dssp TTCSCCCSCHHHHHHHHHHHTCCEEECCT
T ss_pred cccccccccHHHHHHHHHHhCCeEEEEcC
Confidence 34556777788999999999886 565
No 4
>d1qsma_ d.108.1.1 (A:) Histone acetyltransferase HPA2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=20.77 E-value=9.6 Score=24.22 Aligned_cols=20 Identities=25% Similarity=0.421 Sum_probs=16.4
Q ss_pred hhhhhhhcCCCcHHHHHHHC
Q 045782 95 DDLISRRVHSSDAEKFAEVC 114 (147)
Q Consensus 95 DDlI~Rkvn~SDA~~fA~l~ 114 (147)
||.-.|..+++|.++.++++
T Consensus 1 ~~i~IR~~~~~D~e~~~~L~ 20 (150)
T d1qsma_ 1 DNITVRFVTENDKEGWQRLW 20 (150)
T ss_dssp CCEEEEECCGGGHHHHHHHH
T ss_pred CCeEEEECCHHHHHHHHHHH
Confidence 56677999999999887765
No 5
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=19.53 E-value=15 Score=23.97 Aligned_cols=22 Identities=41% Similarity=0.614 Sum_probs=18.5
Q ss_pred hhhcCCCcHHHHHHHCCCC---CCC
Q 045782 99 SRRVHSSDAEKFAEVCPCP---CNG 120 (147)
Q Consensus 99 ~Rkvn~SDA~~fA~l~~~~---~~s 120 (147)
.|.+..+++.+||+..++| ||+
T Consensus 123 ~~~v~~~e~~~~~~~~~~~~~e~Sa 147 (171)
T d2erxa1 123 SREVQSSEAEALARTWKCAFMETSA 147 (171)
T ss_dssp GCCSCHHHHHHHHHHHTCEEEECBT
T ss_pred cccccHHHHHHHHHHcCCeEEEEcC
Confidence 4788889999999999887 565
No 6
>d2ivya1 d.58.58.1 (A:2-89) Hypothetical protein SSO1404 {Sulfolobus solfataricus [TaxId: 2287]}
Probab=18.25 E-value=14 Score=23.95 Aligned_cols=22 Identities=32% Similarity=0.265 Sum_probs=15.5
Q ss_pred ceeehhhhhhhhcCCCcHHHHHHHCCC
Q 045782 90 GADIYDDLISRRVHSSDAEKFAEVCPC 116 (147)
Q Consensus 90 vwDI~DDlI~Rkvn~SDA~~fA~l~~~ 116 (147)
.|||-||.-.+|+ .++-+-||.
T Consensus 7 ~YDI~d~krr~kv-----~k~l~~yGl 28 (88)
T d2ivya1 7 FYDITDDNLRNRV-----AEFLKKKGL 28 (88)
T ss_dssp EEEECCHHHHHHH-----HHHHHHTTC
T ss_pred EEECCCcHHHHHH-----HHHHHHhCC
Confidence 4999999877776 355555653
No 7
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=17.56 E-value=26 Score=22.49 Aligned_cols=35 Identities=23% Similarity=0.356 Sum_probs=25.6
Q ss_pred eeeeecccCCCcccceeehhhhhhhhcCCCcHHHHHHHCCCC---CCC
Q 045782 76 IILFIGKCPHCMYDGADIYDDLISRRVHSSDAEKFAEVCPCP---CNG 120 (147)
Q Consensus 76 ~~LfiGVms~~lYsvwDI~DDlI~Rkvn~SDA~~fA~l~~~~---~~s 120 (147)
.++++|-.+ |..+ .|++..+++.+||+..++| ||+
T Consensus 111 pi~lvgnK~-------Dl~~---~~~v~~~~~~~~~~~~~~~~~e~SA 148 (165)
T d1z06a1 111 PRILVGNKC-------DLRS---AIQVPTDLAQKFADTHSMPLFETSA 148 (165)
T ss_dssp CEEEEEECT-------TCGG---GCCSCHHHHHHHHHHTTCCEEECCS
T ss_pred eEEEEeccc-------cchh---ccchhHHHHHHHHHHCCCEEEEEec
Confidence 455677666 4333 3678999999999999987 665
No 8
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId: 9606]}
Probab=17.00 E-value=24 Score=23.01 Aligned_cols=26 Identities=27% Similarity=0.230 Sum_probs=19.7
Q ss_pred hhhhhhhcCCCcHHHHHHHCCCC---CCC
Q 045782 95 DDLISRRVHSSDAEKFAEVCPCP---CNG 120 (147)
Q Consensus 95 DDlI~Rkvn~SDA~~fA~l~~~~---~~s 120 (147)
|+.=.|.+..++|.+||+..++| ||+
T Consensus 121 D~~~~~~v~~~~~~~~~~~~~~~~~~~SA 149 (171)
T d2ew1a1 121 DLAERREVSQQRAEEFSEAQDMYYLETSA 149 (171)
T ss_dssp GGGGGCSSCHHHHHHHHHHHTCCEEECCT
T ss_pred ccccccchhhhHHHHHHHhCCCEEEEEcc
Confidence 33335678889999999998886 565
No 9
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Probab=15.87 E-value=23 Score=23.24 Aligned_cols=29 Identities=14% Similarity=0.250 Sum_probs=20.4
Q ss_pred hhhhhcCCCcHHHHHHHCC-CC---CCC-cchhH
Q 045782 97 LISRRVHSSDAEKFAEVCP-CP---CNG-IGWGI 125 (147)
Q Consensus 97 lI~Rkvn~SDA~~fA~l~~-~~---~~s-~~WGv 125 (147)
+-.|++..+|+.+||+..+ +| ||+ ..-|+
T Consensus 127 l~~~~v~~~~~~~~~~~~~~~~~~e~Sak~~~gI 160 (174)
T d1wmsa_ 127 ISERQVSTEEAQAWCRDNGDYPYFETSAKDATNV 160 (174)
T ss_dssp CSSCSSCHHHHHHHHHHTTCCCEEECCTTTCTTH
T ss_pred hhhccCcHHHHHHHHHHcCCCeEEEEcCCCCcCH
Confidence 3458899999999999875 44 565 33443
No 10
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId: 9606]}
Probab=15.02 E-value=26 Score=22.80 Aligned_cols=22 Identities=27% Similarity=0.383 Sum_probs=18.7
Q ss_pred hhhcCCCcHHHHHHHCCCC---CCC
Q 045782 99 SRRVHSSDAEKFAEVCPCP---CNG 120 (147)
Q Consensus 99 ~Rkvn~SDA~~fA~l~~~~---~~s 120 (147)
.|.+...++.+||+..++| ||+
T Consensus 123 ~~~v~~~e~~~~a~~~~~~~~e~Sa 147 (167)
T d1z08a1 123 ERHVSIQEAESYAESVGAKHYHTSA 147 (167)
T ss_dssp GCCSCHHHHHHHHHHTTCEEEEEBT
T ss_pred ccccchHHHHHHHHHcCCeEEEEec
Confidence 3788999999999999987 565
Done!