Query 045784
Match_columns 90
No_of_seqs 108 out of 747
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 09:11:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045784.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045784hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3s8i_A Protein DDI1 homolog 1; 99.9 2.5E-23 8.4E-28 132.6 10.4 88 1-88 24-121 (148)
2 2i1a_A DNA damage-inducible pr 99.8 4E-20 1.4E-24 116.8 8.7 85 2-88 27-122 (148)
3 3slz_A GAG-Pro-POL polyprotein 99.2 5E-11 1.7E-15 74.4 8.6 83 3-88 24-110 (132)
4 1fmb_A EIAV protease; hydrolas 99.1 7.8E-10 2.7E-14 66.5 9.6 82 3-88 10-100 (104)
5 3ec0_A Protease; HIV-2, inhibi 99.0 4.4E-09 1.5E-13 62.6 9.5 82 3-87 10-94 (99)
6 2hs1_A HIV-1 protease; ultra-h 99.0 6.9E-09 2.4E-13 61.8 9.9 82 3-87 10-94 (99)
7 2hah_A Protease, retropepsin; 98.9 1.9E-08 6.5E-13 61.4 10.7 82 6-88 18-112 (116)
8 3ka2_A [L-Ala51;Gly51']HIV-1 p 98.6 5.6E-07 1.9E-11 59.6 9.9 82 3-87 10-94 (203)
9 3ka2_A [L-Ala51;Gly51']HIV-1 p 98.2 2.5E-05 8.6E-10 51.7 9.8 82 3-87 114-198 (203)
10 2rsp_A RSV protease; hydrolase 98.0 1.4E-05 4.8E-10 49.2 5.6 79 8-87 27-118 (124)
11 2pma_A Uncharacterized protein 98.0 4.2E-05 1.4E-09 48.3 7.7 77 10-86 17-131 (146)
12 3sqf_A Protease; folded monome 98.0 3.3E-05 1.1E-09 46.9 6.6 82 4-87 12-102 (114)
13 3liy_A Protease; hydrolase, hy 97.7 0.00012 4.1E-09 44.4 6.1 85 4-88 13-111 (116)
14 2jys_A Protease/reverse transc 97.0 0.018 6.2E-07 33.7 9.5 79 4-86 10-96 (107)
15 1lya_B Cathepsin D; lysosomal 95.2 0.064 2.2E-06 35.1 6.3 75 13-87 121-225 (241)
16 1yg9_A Aspartic protease BLA G 95.2 0.063 2.1E-06 36.9 6.4 82 6-87 202-313 (330)
17 2apr_A Rhizopuspepsin; hydrola 95.1 0.02 6.7E-07 39.3 3.6 76 12-87 212-308 (325)
18 3qvc_A Histo-aspartic protease 95.0 0.098 3.3E-06 37.9 7.3 82 6-87 322-433 (451)
19 3cms_A Chymosin B; hydrolase, 95.0 0.069 2.4E-06 36.5 6.2 82 6-87 198-307 (323)
20 1am5_A Pepsin, acid proteinase 94.9 0.087 3E-06 36.0 6.4 82 6-87 197-308 (324)
21 1miq_A Plasmepsin; aspartic pr 94.7 0.22 7.5E-06 34.9 8.2 82 6-87 247-358 (375)
22 1izd_A Aspartic proteinase; su 94.6 0.032 1.1E-06 38.3 3.8 77 11-87 207-307 (323)
23 4aa9_A Chymosin; hydrolase, as 94.5 0.18 6.2E-06 34.2 7.2 81 7-87 196-304 (320)
24 1htr_B Gastricsin; aspartyl pr 94.4 0.058 2E-06 36.9 4.7 75 13-87 212-313 (329)
25 1dpj_A Proteinase A; proteinas 94.4 0.2 6.9E-06 34.2 7.3 82 6-87 201-313 (329)
26 3k1w_A Renin; protease, altern 94.0 0.21 7E-06 34.2 6.7 75 13-87 221-324 (341)
27 1wkr_A Polyporopepsin; hydrola 93.9 0.14 4.7E-06 35.2 5.7 29 6-34 195-228 (340)
28 3qvc_A Histo-aspartic protease 93.9 0.38 1.3E-05 34.8 8.2 78 2-82 139-251 (451)
29 1bxo_A Protein (penicillopepsi 93.7 0.12 4E-06 35.4 5.0 77 11-87 206-307 (323)
30 2bju_A Plasmepsin II; aspartic 93.7 0.42 1.4E-05 34.6 8.1 77 3-82 141-252 (453)
31 2x0b_A Renin; hydrolase-hormon 93.5 0.96 3.3E-05 31.9 9.6 78 3-83 64-176 (383)
32 3psg_A Pepsinogen; hydrolase(a 93.4 0.91 3.1E-05 31.7 9.4 78 2-82 58-169 (370)
33 1wkr_A Polyporopepsin; hydrola 93.3 0.65 2.2E-05 31.7 8.3 77 2-83 14-110 (340)
34 1bxo_A Protein (penicillopepsi 92.9 0.9 3.1E-05 30.9 8.6 27 2-28 17-43 (323)
35 1izd_A Aspartic proteinase; su 92.7 1 3.5E-05 30.7 8.6 27 2-28 17-43 (323)
36 1tzs_A Cathepsin E; hydrolase, 92.5 0.59 2E-05 32.2 7.2 82 6-87 210-326 (351)
37 2bju_A Plasmepsin II; aspartic 92.4 0.34 1.2E-05 35.1 6.2 82 6-87 323-434 (453)
38 1miq_A Plasmepsin; aspartic pr 92.3 0.27 9.2E-06 34.5 5.3 76 4-82 66-176 (375)
39 3pvk_A Candidapepsin-2; hydrol 92.2 0.39 1.3E-05 32.8 5.9 28 7-34 202-234 (342)
40 1ibq_A Aspergillopepsin; aspar 92.0 0.27 9.3E-06 33.6 5.0 77 11-87 207-309 (325)
41 1mpp_A Pepsin; hydrolase(acid 92.0 0.24 8.1E-06 34.3 4.7 29 6-34 218-253 (361)
42 1oew_A Endothiapepsin; hydrola 92.0 0.52 1.8E-05 32.2 6.4 77 11-87 211-313 (329)
43 3k1w_A Renin; protease, altern 91.9 1.7 5.9E-05 29.5 8.9 78 2-82 20-132 (341)
44 2x0b_A Renin; hydrolase-hormon 91.9 0.52 1.8E-05 33.2 6.4 75 13-87 264-367 (383)
45 3cms_A Chymosin B; hydrolase, 91.8 2 6.9E-05 29.1 9.2 26 3-28 17-44 (323)
46 3psg_A Pepsinogen; hydrolase(a 91.7 0.53 1.8E-05 32.9 6.3 76 12-87 253-354 (370)
47 3c9x_A Trichoderma reesei aspa 91.6 1.8 6E-05 29.5 8.8 27 2-28 17-45 (329)
48 1dpj_A Proteinase A; proteinas 91.6 1.4 4.8E-05 29.9 8.3 26 3-28 16-43 (329)
49 1mpp_A Pepsin; hydrolase(acid 91.3 1.5 5.1E-05 30.2 8.2 26 3-28 21-48 (361)
50 1tzs_A Cathepsin E; hydrolase, 91.1 2.1 7.3E-05 29.4 8.8 77 3-82 26-136 (351)
51 1lya_A Cathepsin D; lysosomal 91.1 0.36 1.2E-05 27.7 4.2 28 2-29 15-44 (97)
52 3c9x_A Trichoderma reesei aspa 91.1 0.45 1.6E-05 32.5 5.3 77 11-87 212-314 (329)
53 1j71_A Candidapepsin, aspartic 91.0 0.34 1.2E-05 33.1 4.6 28 7-34 203-234 (334)
54 4aa9_A Chymosin; hydrolase, as 90.9 1.2 4.2E-05 30.0 7.4 77 3-82 14-124 (320)
55 3fv3_A SAPP1P-secreted asparti 90.7 1.1 3.9E-05 30.4 7.0 28 7-34 205-236 (339)
56 1htr_B Gastricsin; aspartyl pr 90.5 2.8 9.5E-05 28.4 8.9 78 2-82 14-125 (329)
57 3lpj_A Beta-secretase 1; alzhe 89.8 1.9 6.4E-05 30.8 7.8 27 2-28 76-104 (455)
58 3pvk_A Candidapepsin-2; hydrol 89.6 3.4 0.00012 28.0 8.8 26 2-27 14-41 (342)
59 2ewy_A Beta-secretase 2; BACE2 89.5 3.8 0.00013 28.3 9.3 27 2-28 15-43 (383)
60 3vf3_A Beta-secretase 1; struc 88.6 2.9 9.9E-05 29.1 7.9 27 2-28 30-58 (402)
61 1ibq_A Aspergillopepsin; aspar 81.9 1.6 5.6E-05 29.6 3.9 27 2-28 16-42 (325)
62 1b5f_A Protein (cardosin A); h 81.7 1.1 3.6E-05 29.3 2.8 29 6-34 197-232 (239)
63 1b5f_A Protein (cardosin A); h 81.4 2.1 7.1E-05 27.9 4.2 26 2-27 15-42 (239)
64 2apr_A Rhizopuspepsin; hydrola 81.2 2.1 7.2E-05 29.1 4.2 27 2-28 17-45 (325)
65 1yg9_A Aspartic protease BLA G 80.6 1.9 6.6E-05 29.4 3.9 26 3-28 20-45 (330)
66 1oew_A Endothiapepsin; hydrola 78.5 2.8 9.4E-05 28.5 4.2 27 2-28 17-45 (329)
67 2qzx_A Candidapepsin-5; aspart 78.2 2.8 9.7E-05 28.5 4.2 26 2-27 14-41 (342)
68 1j71_A Candidapepsin, aspartic 77.2 3.2 0.00011 28.2 4.2 26 2-27 14-41 (334)
69 2qp8_A Beta-secretase 1; BACE1 76.6 3.3 0.00011 28.8 4.2 28 2-29 23-52 (395)
70 3fv3_A SAPP1P-secreted asparti 76.4 3.4 0.00012 28.0 4.2 81 2-84 14-124 (339)
71 3aup_A SBG7S, BG, basic 7S glo 74.7 2.2 7.4E-05 29.9 2.8 20 15-34 262-281 (403)
72 2ewy_A Beta-secretase 2; BACE2 72.8 2.1 7.3E-05 29.6 2.4 21 14-34 222-242 (383)
73 1am5_A Pepsin, acid proteinase 72.8 4.8 0.00017 27.1 4.2 26 3-28 15-42 (324)
74 3aup_A SBG7S, BG, basic 7S glo 72.4 5.2 0.00018 28.0 4.3 28 2-29 23-52 (403)
75 1t6e_X Xylanase inhibitor; two 71.6 2.2 7.5E-05 29.7 2.3 29 6-34 213-251 (381)
76 2qp8_A Beta-secretase 1; BACE1 69.8 2.4 8.3E-05 29.5 2.1 29 6-34 215-253 (395)
77 2qzx_A Candidapepsin-5; aspart 67.3 2.1 7.3E-05 29.2 1.4 28 7-34 203-234 (342)
78 1qdm_A Prophytepsin; aspartic 66.7 7.5 0.00026 28.1 4.2 26 2-27 54-81 (478)
79 3vf3_A Beta-secretase 1; struc 66.4 3.5 0.00012 28.7 2.4 29 6-34 222-260 (402)
80 3lpj_A Beta-secretase 1; alzhe 64.7 4 0.00014 29.1 2.4 29 6-34 268-306 (455)
81 3vla_A EDGP; extracellular, in 61.9 6.3 0.00022 27.9 3.0 21 14-34 267-287 (413)
82 1qdm_A Prophytepsin; aspartic 55.8 11 0.00036 27.3 3.4 22 13-34 254-275 (478)
83 3vla_A EDGP; extracellular, in 51.8 19 0.00067 25.3 4.2 26 3-28 23-50 (413)
84 2a50_A ASFP595, GFP-like non-f 39.3 37 0.0013 18.6 3.1 14 2-15 24-37 (73)
85 2d10_E Ezrin-radixin-moesin bi 36.0 8.7 0.0003 17.1 0.2 9 79-87 15-23 (28)
86 2d11_E Na(+)/H(+) exchange reg 35.1 9.2 0.00031 17.0 0.2 9 79-87 15-23 (28)
87 1o8b_A Ribose 5-phosphate isom 25.1 27 0.00093 22.8 1.2 20 14-33 23-42 (219)
88 2f8m_A Ribose 5-phosphate isom 24.2 30 0.001 23.0 1.3 20 14-33 30-49 (244)
89 1pqh_A Aspartate 1-decarboxyla 23.8 80 0.0027 19.4 3.1 39 4-47 23-75 (143)
90 1xtz_A Ribose-5-phosphate isom 23.5 32 0.0011 23.2 1.4 20 14-33 41-60 (264)
91 3j20_B 30S ribosomal protein S 22.2 39 0.0013 21.9 1.6 18 10-27 134-151 (202)
92 3l7o_A Ribose-5-phosphate isom 21.4 31 0.0011 22.7 1.0 20 14-33 21-40 (225)
93 3u5c_A 40S ribosomal protein S 20.4 44 0.0015 22.5 1.6 19 10-28 140-158 (252)
No 1
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=99.90 E-value=2.5e-23 Score=132.64 Aligned_cols=88 Identities=17% Similarity=0.213 Sum_probs=74.7
Q ss_pred CEEEEEEECCEEEEEEEcCCCCcccccHHhhheeeE----------EecCCCeeeeeceeeeeEEEEeceeEEeeEEEcC
Q 045784 1 MIRVIGRLVHKVVTVLIDSRRTHNFVRQELAVKLNV----------MVASGERFSSLGTCLQTLIKLQGVPLIVDFYLLP 70 (90)
Q Consensus 1 ~~~v~~~i~~~~~~aLiDsGA~~~~i~~~~a~~l~v----------~~a~G~~~~~~~~~~~~~i~i~~~~~~~~~~v~~ 70 (90)
+++++++|||++++||+||||++++|++++|+++.+ ..+..+...+.+.+...++++++..+.++|.|++
T Consensus 24 ~l~v~~~Ing~~v~~LVDTGAs~s~Is~~~A~rlGL~~~~~~~~~~~a~g~G~~~~~g~v~~~~I~Ig~~~~~~~~~Vle 103 (148)
T 3s8i_A 24 MLYINCKVNGHPLKAFVDSGAQMTIMSQACAERCNIMRLVDRRWAGVAKGVGTQRIIGRVHLAQIQIEGDFLQCSFSILE 103 (148)
T ss_dssp CCEEEEEETTEEEEEEECTTCSSCEEEHHHHHHTTCGGGEEGGGCEECCC---CEEEEEEEEEEEEETTEEEEEEEEEET
T ss_pred EEEEEEEECCEEEEEEEeCCCCcEeeCHHHHHHcCCccccCcceeEEEEcCCccEEEEEEEEEEEEECCEEEEEEEEEeC
Confidence 478999999999999999999999999999999922 2222223455677778899999999999999999
Q ss_pred CCCceEEeCcchhhhcCC
Q 045784 71 FEGYDVVLDTQWLSTFGL 88 (90)
Q Consensus 71 ~~~~dvILG~~wL~~~~p 88 (90)
...+|+|||||||++++.
T Consensus 104 ~~~~d~LLGmD~L~~~~~ 121 (148)
T 3s8i_A 104 DQPMDMLLGLDMLRRHQC 121 (148)
T ss_dssp TCSSSEEECHHHHHHTTC
T ss_pred CCCcCeeccHHHHHhCCE
Confidence 999999999999999984
No 2
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=99.82 E-value=4e-20 Score=116.77 Aligned_cols=85 Identities=18% Similarity=0.229 Sum_probs=67.7
Q ss_pred EEEEEEECCEEEEEEEcCCCCcccccHHhhheee--------EE-ecCC--CeeeeeceeeeeEEEEeceeEEeeEEEcC
Q 045784 2 IRVIGRLVHKVVTVLIDSRRTHNFVRQELAVKLN--------VM-VASG--ERFSSLGTCLQTLIKLQGVPLIVDFYLLP 70 (90)
Q Consensus 2 ~~v~~~i~~~~~~aLiDsGA~~~~i~~~~a~~l~--------v~-~a~G--~~~~~~~~~~~~~i~i~~~~~~~~~~v~~ 70 (90)
++++++|||+++.+|+||||++++|++++|+++. +. .++| +. ...+.+...++.+++..+..+|.|++
T Consensus 27 ~~v~v~InG~~~~~LvDTGAs~s~is~~~a~~lgl~~~~~~~~~~~a~g~g~~-~~~~~~~~~~i~ig~~~~~~~~~vl~ 105 (148)
T 2i1a_A 27 LYINIEINNYPVKAFVDTGAQTTIMSTRLAKKTGLSRMIDKRFIGEARGVGTG-KIIGRIHQAQVKIETQYIPCSFTVLD 105 (148)
T ss_dssp CEEEEEETTEEEEEEECTTCSSCEEEHHHHHHHTGGGGCBCCCC------------CEEEEEEEEEETTEEEEEEEEEEC
T ss_pred EEEEEEECCEEEEEEEECCCCccccCHHHHHHcCCCccCCcceEEEEecCCCc-ccccEEEEEEEEECCEEeceeEEEec
Confidence 6899999999999999999999999999999982 22 2332 21 22344555689999999999999999
Q ss_pred CCCceEEeCcchhhhcCC
Q 045784 71 FEGYDVVLDTQWLSTFGL 88 (90)
Q Consensus 71 ~~~~dvILG~~wL~~~~p 88 (90)
.++|.|||||||++++.
T Consensus 106 -~~~d~iLG~d~L~~~~~ 122 (148)
T 2i1a_A 106 -TDIDVLIGLDMLKRHLA 122 (148)
T ss_dssp -SSCSEEECHHHHHHTTC
T ss_pred -CCCCeEecHHHHhhCCE
Confidence 77999999999999874
No 3
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=99.24 E-value=5e-11 Score=74.42 Aligned_cols=83 Identities=18% Similarity=0.143 Sum_probs=62.6
Q ss_pred EEEEEECCEEEEEEEcCCCCcccccHHhhhee----eEEecCCCeeeeeceeeeeEEEEeceeEEeeEEEcCCCCceEEe
Q 045784 3 RVIGRLVHKVVTVLIDSRRTHNFVRQELAVKL----NVMVASGERFSSLGTCLQTLIKLQGVPLIVDFYLLPFEGYDVVL 78 (90)
Q Consensus 3 ~v~~~i~~~~~~aLiDsGA~~~~i~~~~a~~l----~v~~a~G~~~~~~~~~~~~~i~i~~~~~~~~~~v~~~~~~dvIL 78 (90)
.+.++|||+++.+|+||||+.+.+++.-+..- .+..++|... ......++++++++.....+.|.+- ...-||
T Consensus 24 ~v~i~I~G~~~~~LlDTGAd~tVl~~~~~p~~~~p~~I~GiGG~i~--vr~~~~i~IeI~g~~~~~~~lV~~~-tPvnLL 100 (132)
T 3slz_A 24 RITLKVGGQPVTFLVDTGAQHSVLTQNPGPLSDKSAWVQGATGGKR--YRWTTDRKVHLATGKVTHSFLHVPD-CPYPLL 100 (132)
T ss_dssp EEEEEETTEEEEEEECTTCSSCEECSCCCSEEEEEEEEECSSCEEE--EEEECCEEEEETTEEEEECCEECTT-SSSCEE
T ss_pred EEEEEECCEEEEEEEeCCCCeEEEccccCCCCCCceEEEccCCEEE--EEEEeeeEEEECCeeecceEEEECC-CCccEE
Confidence 46799999999999999999999998776622 4556777543 2223346789999988888877532 245789
Q ss_pred CcchhhhcCC
Q 045784 79 DTQWLSTFGL 88 (90)
Q Consensus 79 G~~wL~~~~p 88 (90)
|+|||++++-
T Consensus 101 Grd~Ltqlg~ 110 (132)
T 3slz_A 101 GRDLLTKLKA 110 (132)
T ss_dssp CHHHHHHHTC
T ss_pred CHhhHhhCCc
Confidence 9999999863
No 4
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=99.13 E-value=7.8e-10 Score=66.47 Aligned_cols=82 Identities=15% Similarity=0.186 Sum_probs=63.5
Q ss_pred EEEEEECCEEEEEEEcCCCCcccccHHhhhee---------eEEecCCCeeeeeceeeeeEEEEeceeEEeeEEEcCCCC
Q 045784 3 RVIGRLVHKVVTVLIDSRRTHNFVRQELAVKL---------NVMVASGERFSSLGTCLQTLIKLQGVPLIVDFYLLPFEG 73 (90)
Q Consensus 3 ~v~~~i~~~~~~aLiDsGA~~~~i~~~~a~~l---------~v~~a~G~~~~~~~~~~~~~i~i~~~~~~~~~~v~~~~~ 73 (90)
.+..+|+|++..||+||||..++++++.+.++ ....+-|+.+... ...+++++.++.....++|.+.
T Consensus 10 ~v~v~I~Gq~~e~LLDTGAD~TVl~~~~w~~i~lp~~~w~p~~i~GiGG~i~v~--~~~i~i~i~g~~~~gtvlv~~t-- 85 (104)
T 1fmb_A 10 TTIVLINDTPLNVLLDTGADTSVLTTAHYNRLKYRGRKYQGTGIGGVGGNVETF--STPVTIKKKGRHIKTRMLVADI-- 85 (104)
T ss_dssp EEEEEETTEEEEEEECTTCSSCEEEHHHHHHCSSCCCCEECCCEEETTEEECCE--EEEEEEEETTEEEEEEEEEESC--
T ss_pred EEEEEECCEEEEEEeccCCCcEEEccccCcccCCCCccCCccEEEeCCCeEEee--EeeeEEEECCeEEEEEEEECCC--
Confidence 57899999999999999999999997666542 2223346655555 5678999999998888888663
Q ss_pred ceEEeCcchhhhcCC
Q 045784 74 YDVVLDTQWLSTFGL 88 (90)
Q Consensus 74 ~dvILG~~wL~~~~p 88 (90)
..=|+|.|||.+.+-
T Consensus 86 p~niiGRd~L~qlg~ 100 (104)
T 1fmb_A 86 PVTILGRDILQDLGA 100 (104)
T ss_dssp SSCEECHHHHHHTTC
T ss_pred CCCEecHhHHhhcCc
Confidence 346899999998763
No 5
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=99.02 E-value=4.4e-09 Score=62.62 Aligned_cols=82 Identities=12% Similarity=0.054 Sum_probs=60.9
Q ss_pred EEEEEECCEEEEEEEcCCCCcccccHHhhhee---eEEecCCCeeeeeceeeeeEEEEeceeEEeeEEEcCCCCceEEeC
Q 045784 3 RVIGRLVHKVVTVLIDSRRTHNFVRQELAVKL---NVMVASGERFSSLGTCLQTLIKLQGVPLIVDFYLLPFEGYDVVLD 79 (90)
Q Consensus 3 ~v~~~i~~~~~~aLiDsGA~~~~i~~~~a~~l---~v~~a~G~~~~~~~~~~~~~i~i~~~~~~~~~~v~~~~~~dvILG 79 (90)
.+..+|||++..||+||||.++.+++.-.... ....+-|+.+.... ..++++++.++.....++|-|. .-=|+|
T Consensus 10 ~vti~I~Gq~~e~LLDTGAD~TVl~~~~~Pg~w~pk~igGiGG~i~v~q-y~~i~iei~g~~~~gtvlV~~t--PvniiG 86 (99)
T 3ec0_A 10 VVTAYIEGQPVEVLLDTGADDSIVAGIELGNNYSPKIVGGIGGFINTKE-YKNVEIEVLNKKVRATIMTGDT--PINIFG 86 (99)
T ss_dssp EEEEEETTEEEEEEECTTCSSCEESSCCCCSCCEEEEEEETTEEEEEEE-EEEEEEEETTEEEEEEEEEECC--SSCEEC
T ss_pred eEEEEECCEEEEEEEecCCCceEEcCcccCCCCCceEEEecCCcEeeeE-EeeEEEEECCeEEEEEEEeCCC--CcCeee
Confidence 46789999999999999999999975322222 34445566565544 4568899999998888888553 235789
Q ss_pred cchhhhcC
Q 045784 80 TQWLSTFG 87 (90)
Q Consensus 80 ~~wL~~~~ 87 (90)
.|+|.+.+
T Consensus 87 RnlLtqlG 94 (99)
T 3ec0_A 87 RNILTALG 94 (99)
T ss_dssp HHHHHHHT
T ss_pred hhhHhhcC
Confidence 99999875
No 6
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=99.00 E-value=6.9e-09 Score=61.81 Aligned_cols=82 Identities=13% Similarity=0.153 Sum_probs=61.6
Q ss_pred EEEEEECCEEEEEEEcCCCCcccccHHhhhee---eEEecCCCeeeeeceeeeeEEEEeceeEEeeEEEcCCCCceEEeC
Q 045784 3 RVIGRLVHKVVTVLIDSRRTHNFVRQELAVKL---NVMVASGERFSSLGTCLQTLIKLQGVPLIVDFYLLPFEGYDVVLD 79 (90)
Q Consensus 3 ~v~~~i~~~~~~aLiDsGA~~~~i~~~~a~~l---~v~~a~G~~~~~~~~~~~~~i~i~~~~~~~~~~v~~~~~~dvILG 79 (90)
.+..+|+|++..||+||||..+++++.-...- ....+.|+.+... ...++++++.++.....++|.|.. . =|+|
T Consensus 10 ~vtvkI~Gq~~eaLLDTGAD~TVl~~~~~p~~wkpk~igGiGG~i~v~-qy~qi~iei~g~~~~gtvlV~~tP-v-niiG 86 (99)
T 2hs1_A 10 LVTIKIGGQLKEALLDTGADDTIIEEMSLPGRWKPKMIGGIGGFIKVR-QYDQIIIEIAGHKAIGTVLVGPTP-V-NIIG 86 (99)
T ss_dssp EEEEEETTEEEEEEECTTCSSEEESCCSSCCCCEEEEEEETTEEEEEE-EEEEEEEEETTEEEEEEEEESCCS-S-CEEC
T ss_pred EEEEEECCEEEEEEeccCCCcEEEecccCCCCCCCcEEEeCCCcEeee-EeccEEEEEeCCEEEEEEEeCCCc-c-Cchh
Confidence 46789999999999999999999996544333 3334446555543 445788999999988888885543 3 4789
Q ss_pred cchhhhcC
Q 045784 80 TQWLSTFG 87 (90)
Q Consensus 80 ~~wL~~~~ 87 (90)
.|||.+.+
T Consensus 87 Rd~Ltqlg 94 (99)
T 2hs1_A 87 RNLLTQIG 94 (99)
T ss_dssp HHHHTTTT
T ss_pred HhHHHHcC
Confidence 99998875
No 7
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=98.95 E-value=1.9e-08 Score=61.43 Aligned_cols=82 Identities=7% Similarity=0.065 Sum_probs=60.5
Q ss_pred EEECCEEEEEEEcCCCCcccccHHhh---hee---eE-EecCCCeeeeeceeeeeEEEEecee-----EEeeEEEcC-CC
Q 045784 6 GRLVHKVVTVLIDSRRTHNFVRQELA---VKL---NV-MVASGERFSSLGTCLQTLIKLQGVP-----LIVDFYLLP-FE 72 (90)
Q Consensus 6 ~~i~~~~~~aLiDsGA~~~~i~~~~a---~~l---~v-~~a~G~~~~~~~~~~~~~i~i~~~~-----~~~~~~v~~-~~ 72 (90)
.+|+|++..||+||||..+++++.-. ... .. ..+-|+.+... ...++++++.++. ....++|.| ..
T Consensus 18 ikI~Gq~~eaLLDTGAD~TVi~~~~~~~~p~~wkpk~~igGiGG~i~v~-qy~qv~iei~g~~~~~~~~~gtvlV~p~tP 96 (116)
T 2hah_A 18 IFVNGYPIKFLLDTGADITVLNRRDFQVKNSIENGRQMIGGIGGFIRGT-NYINVHLEIRDENYKTQCIFGNVCVLEDNS 96 (116)
T ss_dssp EEETTEEEEEEECTTCSSCEEEGGGCCCTTCEEEEEEEEEETTEEEEEE-EEEEEEEEECCTTSCCEEEEEEEEEETTCC
T ss_pred EEECCEEEEEEecCCCCcEEEcccccccCCCCCCCceEEecCCCceeee-EEccEEEEEeCCCCCcceeEEEEEECCCCC
Confidence 89999999999999999999998666 333 33 33446555443 4456788888877 777888888 43
Q ss_pred CceEEeCcchhhhcCC
Q 045784 73 GYDVVLDTQWLSTFGL 88 (90)
Q Consensus 73 ~~dvILG~~wL~~~~p 88 (90)
..-=|+|.|+|.+.+-
T Consensus 97 ~~vniiGRd~Ltqlg~ 112 (116)
T 2hah_A 97 TPVNILGRDNMIKFNI 112 (116)
T ss_dssp CSSEEECHHHHTTTTC
T ss_pred ccccEecHHHHhHcCC
Confidence 2235789999998763
No 8
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=98.60 E-value=5.6e-07 Score=59.61 Aligned_cols=82 Identities=12% Similarity=0.093 Sum_probs=58.7
Q ss_pred EEEEEECCEEEEEEEcCCCCcccccHHhhh-ee--eEEecCCCeeeeeceeeeeEEEEeceeEEeeEEEcCCCCceEEeC
Q 045784 3 RVIGRLVHKVVTVLIDSRRTHNFVRQELAV-KL--NVMVASGERFSSLGTCLQTLIKLQGVPLIVDFYLLPFEGYDVVLD 79 (90)
Q Consensus 3 ~v~~~i~~~~~~aLiDsGA~~~~i~~~~a~-~l--~v~~a~G~~~~~~~~~~~~~i~i~~~~~~~~~~v~~~~~~dvILG 79 (90)
.+..+|+|++..||+||||+++.+++--.. +- .....-|..+... ....+++++.++.....++|-+. ..=|+|
T Consensus 10 ~vtv~I~Gq~~e~LLDTGAD~TVl~~~~lpg~w~pk~igGIGG~i~vr-qy~~i~iei~g~~~~gtvlVg~t--PvnIiG 86 (203)
T 3ka2_A 10 LVTIRIGGQLKEALLDTGADDTVIEELNLPGXWKPKLIGGIAGFIKVR-QYDQIPVEIXGHKAIGTVLVGPT--PVNIIG 86 (203)
T ss_dssp EEEEEETTEEEEEEECTTCSSCEECSCCCSSCEEEEEEEETTEEEEEE-EEEEEEEEETTEEEEEEEEESCC--SSCEEC
T ss_pred eEEEEECCEEEEEEEecCCCceEEecccCCCCCCceEEEEccCcEEEE-EEcceeEEEcCeEEEEEEeeCCC--CcCccc
Confidence 578999999999999999999999842111 11 2233335444432 34468899999998888888653 444899
Q ss_pred cchhhhcC
Q 045784 80 TQWLSTFG 87 (90)
Q Consensus 80 ~~wL~~~~ 87 (90)
.|.|.+.+
T Consensus 87 Rd~LtqlG 94 (203)
T 3ka2_A 87 RNLLTQIG 94 (203)
T ss_dssp HHHHTTTT
T ss_pred hhhhhhcC
Confidence 99999876
No 9
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=98.17 E-value=2.5e-05 Score=51.69 Aligned_cols=82 Identities=13% Similarity=0.116 Sum_probs=57.9
Q ss_pred EEEEEECCEEEEEEEcCCCCcccccHHhhhe-e--eEEecCCCeeeeeceeeeeEEEEeceeEEeeEEEcCCCCceEEeC
Q 045784 3 RVIGRLVHKVVTVLIDSRRTHNFVRQELAVK-L--NVMVASGERFSSLGTCLQTLIKLQGVPLIVDFYLLPFEGYDVVLD 79 (90)
Q Consensus 3 ~v~~~i~~~~~~aLiDsGA~~~~i~~~~a~~-l--~v~~a~G~~~~~~~~~~~~~i~i~~~~~~~~~~v~~~~~~dvILG 79 (90)
.+..+++|++..+|+||||.++.+++--... - +..-.-|.-+... ...++++++.++.....++|-|. .-=|+|
T Consensus 114 ~~~iki~Gq~~e~LlDTGAD~TVl~~~~lpg~w~pk~igGiGg~i~v~-qy~~i~iei~g~~~~~tvlVgpt--PvniiG 190 (203)
T 3ka2_A 114 LVTIRIGGQLKEALLDTGADDTVIEELNLPGXWKPKLIGGIGGFIKVR-QYDQIPVEIXGHKAIGTVLVGPT--PVNIIG 190 (203)
T ss_dssp EEEEEETTEEEEEEECTTCSSCEECSCCCCSCCEEEEEEETTEEEEEE-EEEEEEEEETTEEEEEEEEESCC--SSCEEC
T ss_pred cEEEEECCEEEeeeecccCCceeeecccCCCCCCceEEeeccceEEEE-EeccEEEEECCeEEEEEEEECCC--CcCeec
Confidence 3678999999999999999999997422211 1 2222335444332 33567889999988888888764 445679
Q ss_pred cchhhhcC
Q 045784 80 TQWLSTFG 87 (90)
Q Consensus 80 ~~wL~~~~ 87 (90)
.|.|.+.+
T Consensus 191 Rn~LtqlG 198 (203)
T 3ka2_A 191 RNLLTQIG 198 (203)
T ss_dssp HHHHGGGT
T ss_pred hhhHHHhC
Confidence 99999876
No 10
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=98.00 E-value=1.4e-05 Score=49.19 Aligned_cols=79 Identities=18% Similarity=0.146 Sum_probs=49.4
Q ss_pred ECCEEEEEEEcCCCCcccccHHhhhee-eEE------ecC-CCeeeeeceee-eeEEEEece--eEEeeEEEcCCC--Cc
Q 045784 8 LVHKVVTVLIDSRRTHNFVRQELAVKL-NVM------VAS-GERFSSLGTCL-QTLIKLQGV--PLIVDFYLLPFE--GY 74 (90)
Q Consensus 8 i~~~~~~aLiDsGA~~~~i~~~~a~~l-~v~------~a~-G~~~~~~~~~~-~~~i~i~~~--~~~~~~~v~~~~--~~ 74 (90)
++|+...||+||||..+++++.-...- +.. +.+ |+.+... ... .+++++.++ .....+.|.|.. ..
T Consensus 27 i~gq~~eaLLDTGAD~TVl~~~~lP~~W~k~~~~~~~igGIGG~i~v~-qy~~~i~iei~g~~g~~~~tvlV~P~~~~tP 105 (124)
T 2rsp_A 27 QRSVYITALLDSGADITIISEEDWPTDWPVMEAANPQIHGIGGGIPMR-KSRDMIELGVINRDGSLERPLLLFPAVAMVR 105 (124)
T ss_dssp CSEEEEEEEECTTCSSCEEETTTSCTTSCEEECC---------CCCEE-EESSCEEEEEECTTSCBCCCEEECCEEESCS
T ss_pred CCCEEEEEEecCCCCcEEEecccCCCcceeeccccceeeecCceEeeE-EeCCceEEEEeCCCCcEEEEEEECcCCCCCc
Confidence 899999999999999999986444222 211 111 2222222 233 567777776 555667777731 12
Q ss_pred eEEeCcchhhhcC
Q 045784 75 DVVLDTQWLSTFG 87 (90)
Q Consensus 75 dvILG~~wL~~~~ 87 (90)
-=|+|.|.|.+.+
T Consensus 106 vnIiGRdlLtqlG 118 (124)
T 2rsp_A 106 GSILGRDCLQGLG 118 (124)
T ss_dssp SEEECHHHHHHTT
T ss_pred eeEECHhHHhhCC
Confidence 3578999999876
No 11
>2pma_A Uncharacterized protein; APC86035.2, protein LPG0085, DUF785, legionella pneumophila pneumophila STR. philadelphia 1; 1.89A {Legionella pneumophila subsp} SCOP: b.50.1.3
Probab=97.98 E-value=4.2e-05 Score=48.25 Aligned_cols=77 Identities=14% Similarity=0.083 Sum_probs=53.5
Q ss_pred CEEEEEEEcCCCCcccccHHhhhee--------eE---------------------EecCCCe-------eeeeceeeee
Q 045784 10 HKVVTVLIDSRRTHNFVRQELAVKL--------NV---------------------MVASGER-------FSSLGTCLQT 53 (90)
Q Consensus 10 ~~~~~aLiDsGA~~~~i~~~~a~~l--------~v---------------------~~a~G~~-------~~~~~~~~~~ 53 (90)
|.++.|-|||||..|-|+..-.+.+ .. +-.+|.. -.....+-..
T Consensus 17 g~~~~AKiDTGA~TSSLhA~dI~~Ferdg~~wVrF~~~~~~~~~~~e~pv~~~~~Ik~s~g~~~~~~~~~~~e~R~VV~~ 96 (146)
T 2pma_A 17 NLTLSAKLDTGAKSASLHAVNITEIEKKGIPYLRFTVPTKTGDYSFEGEYVGKVKIKVRSSETNPGLLRTTPIKRPVVLL 96 (146)
T ss_dssp TEEEEEEECTTCSSEEEECEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEEEEEC---------------CCEEEEEEE
T ss_pred CCEEEEEecCCcCcceecceeEEEeeeCCCcEEEEEEecCCCCceEEEEeEEEEEEecCCCccccccccCCcccccEEEE
Confidence 6779999999999999998877654 11 1122320 0111223356
Q ss_pred EEEEeceeEEeeEEEcCC--CCceEEeCcchhhhc
Q 045784 54 LIKLQGVPLIVDFYLLPF--EGYDVVLDTQWLSTF 86 (90)
Q Consensus 54 ~i~i~~~~~~~~~~v~~~--~~~dvILG~~wL~~~ 86 (90)
.+.+|+.....+|.+.+= ..|+++||.+||++.
T Consensus 97 ~i~lG~~~~~ie~tLtdRs~m~ypmLLGR~~L~~~ 131 (146)
T 2pma_A 97 NIKLGDKVRTIKVNLTNRKRFLYPLLLGRDAIIDF 131 (146)
T ss_dssp EEEETTEEEEEEEEEECCCCCSCSEEECHHHHHHT
T ss_pred EEEECCEEEEEEEEEcCCCcCCCCEEechhHHhhC
Confidence 788999999999999985 459999999999764
No 12
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=97.96 E-value=3.3e-05 Score=46.86 Aligned_cols=82 Identities=13% Similarity=0.080 Sum_probs=49.6
Q ss_pred EEEEECCEEEEEEEcCCCCcccccHHhhhee-eE----EecC--CCeeeeeceeeeeEEE--EeceeEEeeEEEcCCCCc
Q 045784 4 VIGRLVHKVVTVLIDSRRTHNFVRQELAVKL-NV----MVAS--GERFSSLGTCLQTLIK--LQGVPLIVDFYLLPFEGY 74 (90)
Q Consensus 4 v~~~i~~~~~~aLiDsGA~~~~i~~~~a~~l-~v----~~a~--G~~~~~~~~~~~~~i~--i~~~~~~~~~~v~~~~~~ 74 (90)
+..+|+|++..||+||||..+.++..-.... +- +.-. |+.+.... ......+ +.++.-....+|.+-...
T Consensus 12 vti~I~Gq~~eaLLDTGADdTVi~~~~lpg~W~p~~~~k~igGIGG~i~v~q-y~~~~~~~~i~g~k~i~tvlV~~ptPv 90 (114)
T 3sqf_A 12 LTLWLDDKMFTGLINTGADVTIIKLEDWPPNWPITDTLTNLRGIGQSNNPKQ-SSKYLTWRDKENNSGLIKPFVIPNLPV 90 (114)
T ss_dssp EEEEETTEEEEEEECTTCSSCEEEGGGSCTTSCEEECCCCCTTCCGGGCCEE-ESSCEEEECTTCCEEEECCEEETTCSS
T ss_pred EEEEECCEEEEEEEccCCCceEEecccCCCCcccCcCceEEEeccceEEEEE-eccceEEEecCCCEEEEEEEECCCCcc
Confidence 6789999999999999999999986544322 22 1111 33332221 1122222 566665555566532233
Q ss_pred eEEeCcchhhhcC
Q 045784 75 DVVLDTQWLSTFG 87 (90)
Q Consensus 75 dvILG~~wL~~~~ 87 (90)
+ |+|.|-|.+.+
T Consensus 91 N-IiGRn~LtqlG 102 (114)
T 3sqf_A 91 N-LWGRDLLSQMK 102 (114)
T ss_dssp C-EECHHHHTTSC
T ss_pred c-EEchhhHhhcC
Confidence 3 57999998875
No 13
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=97.70 E-value=0.00012 Score=44.40 Aligned_cols=85 Identities=9% Similarity=0.106 Sum_probs=50.7
Q ss_pred EEEEEC-----CEEEEEEEcCCCCcccccHHhhhee-eE----EecCCCeeeeeceeeeeEEEEec----eeEEeeEEEc
Q 045784 4 VIGRLV-----HKVVTVLIDSRRTHNFVRQELAVKL-NV----MVASGERFSSLGTCLQTLIKLQG----VPLIVDFYLL 69 (90)
Q Consensus 4 v~~~i~-----~~~~~aLiDsGA~~~~i~~~~a~~l-~v----~~a~G~~~~~~~~~~~~~i~i~~----~~~~~~~~v~ 69 (90)
+..+|+ |+...||+||||..+.+.+.-.... +. .+..++..........+++.+.. .+.......+
T Consensus 13 vtikI~~~~~~Gq~~eaLLDTGADdTVl~~~~lPg~Wkp~~tkiiGGiGg~~~~~qs~~~pv~i~lpfr~~pv~l~~~lv 92 (116)
T 3liy_A 13 IKAQVDTQTSHPKTIEALLDTGADMTVIPIALFSSNTPLKNTSVLGAGGQTQDHFKLTSLPVLIRLPFRTTPIVLTSCLV 92 (116)
T ss_dssp EEEEEECSSSCCEEEEEEECTTBSSCEEEGGGSCTTCCEEECCEEETTEEESSSEEEESSCEEEECTTCCSCEEESSCEE
T ss_pred EEEEEccccCCCeEeEEEeccCCCccEEecccCCCCCcccccceEeecccceeeeEecCCCeEEEeccCCcceeeceEEE
Confidence 577899 9999999999999999997655544 33 12222222222233445555553 2222222223
Q ss_pred CCCCceEEeCcchhhhcCC
Q 045784 70 PFEGYDVVLDTQWLSTFGL 88 (90)
Q Consensus 70 ~~~~~dvILG~~wL~~~~p 88 (90)
+....=-|+|.|-|++.+.
T Consensus 93 ~~~~~w~iigRd~l~q~q~ 111 (116)
T 3liy_A 93 DTKNNWAIIGRDALQQCQG 111 (116)
T ss_dssp ETTSCCCEECHHHHHHTTC
T ss_pred cCCCceeEechhHHhhhcc
Confidence 3333446789999998764
No 14
>2jys_A Protease/reverse transcriptase; retroviral protease, hydrolase; NMR {Simian foamy virus type 1}
Probab=97.00 E-value=0.018 Score=33.74 Aligned_cols=79 Identities=18% Similarity=0.238 Sum_probs=57.5
Q ss_pred EEEEECCEEEEEEEcCCCCcccccHHhhhee------eEEecCCCeeeeeceeeeeEEEEeceeEEeeEEEcCCCCceEE
Q 045784 4 VIGRLVHKVVTVLIDSRRTHNFVRQELAVKL------NVMVASGERFSSLGTCLQTLIKLQGVPLIVDFYLLPFEGYDVV 77 (90)
Q Consensus 4 v~~~i~~~~~~aLiDsGA~~~~i~~~~a~~l------~v~~a~G~~~~~~~~~~~~~i~i~~~~~~~~~~v~~~~~~dvI 77 (90)
+.+.+.|..+.+.-||||+...|.+.|...- .++.-.|++.. ...-++++++|+...++..--+++ |=+|
T Consensus 10 L~vEiKg~kLkg~WDsGA~ITCiP~~fL~~E~PI~~~~I~TIHG~k~q---~vYYl~fKv~GRKveaEVi~sp~d-Yvli 85 (107)
T 2jys_A 10 LEAEIKGTKLKAHWDSGATITCVPEAFLEDERPIQTMLIKTIHGEKQQ---DVYYLTFKVQGRKVEAEVLASPYD-YILL 85 (107)
T ss_dssp EEEEETTEEEEEEECTTCSSEEEEGGGTTTCCCSEEEEEECSSCEEEE---EEEEEEEEESSCEEEEEEEEESSS-SEEE
T ss_pred eeEEEeCcEEEEEecCCCeEEEcchHHhcccccccceEEEEecCceec---eEEEEEEEEcCeEEEEEEecCccc-EEEE
Confidence 5678999999999999999999999998876 45666676543 234578999999988887766532 1111
Q ss_pred e--Ccchhhhc
Q 045784 78 L--DTQWLSTF 86 (90)
Q Consensus 78 L--G~~wL~~~ 86 (90)
- -.||+++.
T Consensus 86 ~P~DiPW~~~~ 96 (107)
T 2jys_A 86 NPSDVPWLMKK 96 (107)
T ss_dssp CTTTCHHHHSC
T ss_pred cCcCccccccC
Confidence 1 35787654
No 15
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=95.20 E-value=0.064 Score=35.07 Aligned_cols=75 Identities=15% Similarity=0.149 Sum_probs=45.4
Q ss_pred EEEEEcCCCCcccccHHhhhee-----eEEecCCC-eeeeec--eeeeeEEEEeceeEEe---------------eEE--
Q 045784 13 VTVLIDSRRTHNFVRQELAVKL-----NVMVASGE-RFSSLG--TCLQTLIKLQGVPLIV---------------DFY-- 67 (90)
Q Consensus 13 ~~aLiDsGA~~~~i~~~~a~~l-----~v~~a~G~-~~~~~~--~~~~~~i~i~~~~~~~---------------~~~-- 67 (90)
..+++|||++..++.++.++++ .....+|. .+.|.. ..+.+.+.+++..+.. .+.
T Consensus 121 ~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~~~g~~~~~C~~~~~~p~i~f~f~g~~~~l~~~~y~~~~~~~~~~~C~~~ 200 (241)
T 1lya_B 121 CEAIVDTGTSLMVGPVDEVRELQKAIGAVPLIQGEYMIPCEKVSTLPAITLKLGGKGYKLSPEDYTLKVSQAGKTLCLSG 200 (241)
T ss_dssp EEEEECTTCSSEEECHHHHHHHHHHHTCEEEETTEEEEEGGGGGGSCCEEEEETTEEEEECTTTSEEEETTTTSSEEEES
T ss_pred CEEEEECCCccccCCHHHHHHHHHHhCCeeccCCcEEEECCCCccCCeEEEEECCEEEEECHHHhEEEccCCCCCeeEEE
Confidence 5799999999999999999888 11112232 233321 2345666666654421 122
Q ss_pred EcCC-----CCceEEeCcchhhhcC
Q 045784 68 LLPF-----EGYDVVLDTQWLSTFG 87 (90)
Q Consensus 68 v~~~-----~~~dvILG~~wL~~~~ 87 (90)
+.+. .+...|||..||+.+.
T Consensus 201 ~~~~~~~~~~~~~~ilG~~fl~~~y 225 (241)
T 1lya_B 201 FMGMDIPPPSGPLWILGDVFIGRYY 225 (241)
T ss_dssp EEECCCCTTTCCCEEECHHHHTTEE
T ss_pred EEecccCCCCCCeEEechHHhcceE
Confidence 2222 2346899999999764
No 16
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=95.18 E-value=0.063 Score=36.91 Aligned_cols=82 Identities=7% Similarity=0.156 Sum_probs=51.9
Q ss_pred EEECCEE-----EEEEEcCCCCcccccHHhhhee-----eEEecCCC----eeeeec--eeeeeEEEEeceeEEee----
Q 045784 6 GRLVHKV-----VTVLIDSRRTHNFVRQELAVKL-----NVMVASGE----RFSSLG--TCLQTLIKLQGVPLIVD---- 65 (90)
Q Consensus 6 ~~i~~~~-----~~aLiDsGA~~~~i~~~~a~~l-----~v~~a~G~----~~~~~~--~~~~~~i~i~~~~~~~~---- 65 (90)
..++++. ..+++|||++..++.++.++++ .....+|. .+.|.. ..+.+.+.+++..+..+
T Consensus 202 i~v~~~~~~~~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~~~g~~~~~~~~C~~~~~~p~i~f~fgg~~~~l~~~~y 281 (330)
T 1yg9_A 202 VKIGDTTVAPAGTQAIIDTSKAIIVGPKAYVNPINEAIGCVVEKTTTRRICKLDCSKIPSLPDVTFVINGRNFNISSQYY 281 (330)
T ss_dssp EEETTEEEECTTCEEEECTTCSSEEEEHHHHHHHHHHHTCEEEECSSCEEEEECGGGGGGSCCEEEEETTEEEEECHHHH
T ss_pred EEECCEEEcCCCcEEEEecCCccccCCHHHHHHHHHHhCCcccCCCceEEEEEECCCccccCcEEEEECCEEEEECHHHh
Confidence 3566655 4699999999999999999988 11222341 233332 24567788887665431
Q ss_pred -------EE--EcCC-CCceEEeCcchhhhcC
Q 045784 66 -------FY--LLPF-EGYDVVLDTQWLSTFG 87 (90)
Q Consensus 66 -------~~--v~~~-~~~dvILG~~wL~~~~ 87 (90)
+. +.+. .+...|||..||+.+.
T Consensus 282 ~~~~~~~C~~~i~~~~~~~~~ilG~~fl~~~y 313 (330)
T 1yg9_A 282 IQQNGNLCYSGFQPCGHSDHFFIGDFFVDHYY 313 (330)
T ss_dssp EEEETTEEEESEEEETTCSSEEECHHHHTTEE
T ss_pred cccCCCcEEEEEEeCCCCCeEEecHHHhhheE
Confidence 11 2221 2345899999999864
No 17
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=95.08 E-value=0.02 Score=39.35 Aligned_cols=76 Identities=9% Similarity=-0.023 Sum_probs=43.9
Q ss_pred EEEEEEcCCCCcccccHH----hhhee--eEEecCCCeeeeece-eeeeEEEEeceeEEee------------EE--EcC
Q 045784 12 VVTVLIDSRRTHNFVRQE----LAVKL--NVMVASGERFSSLGT-CLQTLIKLQGVPLIVD------------FY--LLP 70 (90)
Q Consensus 12 ~~~aLiDsGA~~~~i~~~----~a~~l--~v~~a~G~~~~~~~~-~~~~~i~i~~~~~~~~------------~~--v~~ 70 (90)
+..+++|||++..++.++ +++.+ .+..++.-.+.|... .+.+.+.+++..+..+ +. +.+
T Consensus 212 ~~~~iiDSGTs~~~lP~~~~~~~~~~~~~~~~~~g~~~~~C~~~~~p~i~f~f~g~~~~ip~~~~~~~~~~~~C~~~i~~ 291 (325)
T 2apr_A 212 SFDGILDTGTTLLILPNNIAASVARAYGASDNGDGTYTISCDTSAFKPLVFSINGASFQVSPDSLVFEEFQGQCIAGFGY 291 (325)
T ss_dssp CEEEEECTTCSSEEEEHHHHHHHHHHHTCEECSSSCEEECSCGGGCCCEEEEETTEEEEECGGGGEEEEETTEEEESEEE
T ss_pred CceEEEecCCccEECCHHHHHHHHHHHhcccCCCCeEEEECCCCCCCcEEEEECCEEEEECHHHEEEcCCCCeEEEEEEc
Confidence 457999999999999999 55555 222121122333322 3556677765433211 11 111
Q ss_pred CCCceEEeCcchhhhcC
Q 045784 71 FEGYDVVLDTQWLSTFG 87 (90)
Q Consensus 71 ~~~~dvILG~~wL~~~~ 87 (90)
......|||..||+.+.
T Consensus 292 ~~~~~~iLG~~fl~~~y 308 (325)
T 2apr_A 292 GNWGFAIIGDTFLKNNY 308 (325)
T ss_dssp ESSSSEEECHHHHTTEE
T ss_pred CCCCCEEECHHHhcceE
Confidence 22345899999999764
No 18
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=95.02 E-value=0.098 Score=37.88 Aligned_cols=82 Identities=12% Similarity=0.129 Sum_probs=51.7
Q ss_pred EEECC---EEEEEEEcCCCCcccccHHhhhee----eEEe-c-CCC-eeeee-ceeeeeEEEEeceeEEee---E-----
Q 045784 6 GRLVH---KVVTVLIDSRRTHNFVRQELAVKL----NVMV-A-SGE-RFSSL-GTCLQTLIKLQGVPLIVD---F----- 66 (90)
Q Consensus 6 ~~i~~---~~~~aLiDsGA~~~~i~~~~a~~l----~v~~-a-~G~-~~~~~-~~~~~~~i~i~~~~~~~~---~----- 66 (90)
..+++ ....+++|||++..++.++.++++ .... . .|. .+.|. ...+.+.+.+++..+..+ +
T Consensus 322 I~Vgg~~~~~~~aiiDSGTt~i~lP~~~~~~i~~~i~a~~~~~~g~y~v~C~~~~~P~itf~fgg~~i~lp~~~yi~~~~ 401 (451)
T 3qvc_A 322 VHFGNVSSKKANVILDSATSVITVPTEFFNQFVESASVFKVPFLSLYVTTCGNTKLPTLEYRSPNKVYTLEPKQYLEPLE 401 (451)
T ss_dssp EEETTEEEEEEEEEECTTBSSEEECHHHHHHHHTTTTCEECTTSSCEEEETTCTTCCCEEEEETTEEEEECHHHHEEECT
T ss_pred EEECCccCCCceEEEeCCCccccCCHHHHHHHHHHcCCeecCCCCeEEeeCCcCcCCcEEEEECCEEEEEcHHHheeecc
Confidence 45555 467899999999999999999988 1111 1 222 23443 233566777777655431 1
Q ss_pred ---------EEcCCC--CceEEeCcchhhhcC
Q 045784 67 ---------YLLPFE--GYDVVLDTQWLSTFG 87 (90)
Q Consensus 67 ---------~v~~~~--~~dvILG~~wL~~~~ 87 (90)
.+.+.. +...|||..||+.+.
T Consensus 402 ~~~~~~C~~~i~~~~~~~~~~ILG~~FLr~~Y 433 (451)
T 3qvc_A 402 NIFSALCMLNIVPIDLEKNTFVLGDPFMRKYF 433 (451)
T ss_dssp TTSTTEEEECEEECCCSTTEEEECHHHHHHEE
T ss_pred cCCCCeEEEEEEeCCCCCCCEEECHHHhhcEE
Confidence 122222 356899999999864
No 19
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=95.01 E-value=0.069 Score=36.49 Aligned_cols=82 Identities=9% Similarity=0.080 Sum_probs=49.9
Q ss_pred EEECCEEE------EEEEcCCCCcccccHHhhhee-----eEEecCCC-eeeee--ceeeeeEEEEeceeEEee------
Q 045784 6 GRLVHKVV------TVLIDSRRTHNFVRQELAVKL-----NVMVASGE-RFSSL--GTCLQTLIKLQGVPLIVD------ 65 (90)
Q Consensus 6 ~~i~~~~~------~aLiDsGA~~~~i~~~~a~~l-----~v~~a~G~-~~~~~--~~~~~~~i~i~~~~~~~~------ 65 (90)
..++++.+ .+++|||++..++.++.++++ .....+|. .+.|. ...+.+.+.+++..+...
T Consensus 198 i~v~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~y~~ 277 (323)
T 3cms_A 198 VTISGVVVACEGGCQAILDTGTSKLVGPSSDILNIQQAIGATQNQYGEFDIDCDNLSYMPTVVFEINGKMYPLTPSAYTS 277 (323)
T ss_dssp EEETTEEEESTTCEEEEECTTCCSEEECHHHHHHHHHHHTCEEETTTEEEECTTCTTTSCCEEEEETTEEEEECHHHHEE
T ss_pred EEECCEEeecCCCcEEEEecCCccEeCCHHHHHHHHHHhCCeecCCCcEEEECCCCccCceEEEEECCEEEEECHHHhcc
Confidence 35666654 699999999999999999887 11112222 12232 123456777777655321
Q ss_pred -----EE--EcCC-CCceEEeCcchhhhcC
Q 045784 66 -----FY--LLPF-EGYDVVLDTQWLSTFG 87 (90)
Q Consensus 66 -----~~--v~~~-~~~dvILG~~wL~~~~ 87 (90)
+. +.+. .+...|||..||+.+.
T Consensus 278 ~~~~~C~~~i~~~~~~~~~iLG~~fl~~~y 307 (323)
T 3cms_A 278 QDQGFCTSGFQSENHSQKWILGDVFIREYY 307 (323)
T ss_dssp EETTEEEESEEEC---CCEEECHHHHTTEE
T ss_pred CCCCEEEEEEEeCCCCCcEEECHHHhhceE
Confidence 22 2233 2356899999999764
No 20
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=94.86 E-value=0.087 Score=35.95 Aligned_cols=82 Identities=9% Similarity=0.032 Sum_probs=50.9
Q ss_pred EEECCEE-----EEEEEcCCCCcccccHHhhhee----eEEecCCC-eeeeec--eeeeeEEEEeceeEEe---------
Q 045784 6 GRLVHKV-----VTVLIDSRRTHNFVRQELAVKL----NVMVASGE-RFSSLG--TCLQTLIKLQGVPLIV--------- 64 (90)
Q Consensus 6 ~~i~~~~-----~~aLiDsGA~~~~i~~~~a~~l----~v~~a~G~-~~~~~~--~~~~~~i~i~~~~~~~--------- 64 (90)
..++++. ..+++|||++..++.++.++++ .....+|. ...|.. ..+.+.+.+++..+..
T Consensus 197 i~v~~~~~~~~~~~aiiDSGTt~~~lp~~~~~~l~~~~~~~~~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~y~~~~ 276 (324)
T 1am5_A 197 ITVNGQTAACEGCQAIVDTGTSKIVAPVSALANIMKDIGASENQGEMMGNCASVQSLPDITFTINGVKQPLPPSAYIEGD 276 (324)
T ss_dssp EEETTEECCCCCEEEEECTTCSSEEECTTTHHHHHHHHTCEECCCCEECCTTSSSSSCCEEEEETTEEEEECHHHHEEES
T ss_pred EEECCceeeccCceEEEecCCccEECCHHHHHHHHHHhCCcccCCcEEEeCCCcccCCcEEEEECCEEEEECHHHhcccC
Confidence 3466655 5799999999999999998887 11122332 122321 2355777777765532
Q ss_pred --eEE--EcCC-----CCceEEeCcchhhhcC
Q 045784 65 --DFY--LLPF-----EGYDVVLDTQWLSTFG 87 (90)
Q Consensus 65 --~~~--v~~~-----~~~dvILG~~wL~~~~ 87 (90)
.+. +.+. .+...|||..||+.+.
T Consensus 277 ~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y 308 (324)
T 1am5_A 277 QAFCTSGLGSSGVPSNTSELWIFGDVFLRNYY 308 (324)
T ss_dssp SSCEEECEEECCSCCSSSCEEEECHHHHHHEE
T ss_pred CCeEEEEEEECccCCCCCCcEEEChHHhccEE
Confidence 121 2222 2356899999999864
No 21
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=94.69 E-value=0.22 Score=34.90 Aligned_cols=82 Identities=15% Similarity=0.105 Sum_probs=49.5
Q ss_pred EEECCE---EEEEEEcCCCCcccccHHhhhee----eE--EecCCC-eeeeec-eeeeeEEEEeceeEEe----------
Q 045784 6 GRLVHK---VVTVLIDSRRTHNFVRQELAVKL----NV--MVASGE-RFSSLG-TCLQTLIKLQGVPLIV---------- 64 (90)
Q Consensus 6 ~~i~~~---~~~aLiDsGA~~~~i~~~~a~~l----~v--~~a~G~-~~~~~~-~~~~~~i~i~~~~~~~---------- 64 (90)
..++++ ...|++|||.+..++.++.++++ .. ...+|. ...|.. ..+.+.+.++|..+..
T Consensus 247 i~v~g~~~~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~~~~g~~~~~C~~~~~P~i~f~f~g~~~~l~~~~yi~~~~ 326 (375)
T 1miq_A 247 VHFGKQTMEKANVIVDSGTTTITAPSEFLNKFFANLNVIKVPFLPFYVTTCDNKEMPTLEFKSANNTYTLEPEYYMNPIL 326 (375)
T ss_dssp EEETTEEEEEEEEEECTTBSSEEECHHHHHHHHHHHTCEECTTSSCEEEETTCTTCCCEEEECSSCEEEECGGGSEEESS
T ss_pred EEECCEEcccceEEecCCCccEEcCHHHHHHHHHHhCCcccCCCCeEEEECCCCCCCcEEEEECCEEEEECHHHhEeecc
Confidence 567774 56899999999999999999888 11 112232 123322 2345566666544321
Q ss_pred -----eEE--EcCCC--CceEEeCcchhhhcC
Q 045784 65 -----DFY--LLPFE--GYDVVLDTQWLSTFG 87 (90)
Q Consensus 65 -----~~~--v~~~~--~~dvILG~~wL~~~~ 87 (90)
.+. +.+.. ....|||..||+.+.
T Consensus 327 ~~g~~~C~~~~~~~~~~~~~~ILG~~fl~~~y 358 (375)
T 1miq_A 327 EVDDTLCMITMLPVDIDSNTFILGDPFMRKYF 358 (375)
T ss_dssp SSSCSEEEESEEECCSSSSEEEECHHHHHHEE
T ss_pred CCCCCeEEEEEEECCCCCCcEEECHHHhccEE
Confidence 111 22222 246899999999764
No 22
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=94.63 E-value=0.032 Score=38.26 Aligned_cols=77 Identities=12% Similarity=0.082 Sum_probs=47.9
Q ss_pred EEEEEEEcCCCCcccccHHhhhee--eE---Ee--cCCC-eeeeeceeeeeEEEEeceeEEee-------------EE--
Q 045784 11 KVVTVLIDSRRTHNFVRQELAVKL--NV---MV--ASGE-RFSSLGTCLQTLIKLQGVPLIVD-------------FY-- 67 (90)
Q Consensus 11 ~~~~aLiDsGA~~~~i~~~~a~~l--~v---~~--a~G~-~~~~~~~~~~~~i~i~~~~~~~~-------------~~-- 67 (90)
....+++|||.+..++.++.++++ .+ .. .+|. .+.|....+.+.+.+++..+..+ +.
T Consensus 207 ~~~~aiiDSGTs~~~lp~~~~~~i~~~i~ga~~~~~~g~~~~~C~~~~P~i~f~fgg~~~~i~~~~~~~~~~~~~~C~~~ 286 (323)
T 1izd_A 207 DSITGIADTGTTLLLLDDSIVDAYYEQVNGASYDSSQGGYVFPSSASLPDFSVTIGDYTATVPGEYISFADVGNGQTFGG 286 (323)
T ss_dssp CCEEEEECTTCCSEEECHHHHHHHHTTSTTCEEETTTTEEEEETTCCCCCEEEEETTEEEEECHHHHEEEECSTTEEEES
T ss_pred CCceEEEeCCCcceeCCHHHHHHHHHhCCCcEEcCcCCEEEEECCCCCceEEEEECCEEEecCHHHeEEecCCCCeEEEE
Confidence 456799999999999999998887 21 11 1221 23343334567777777654321 11
Q ss_pred EcCCC-CceEEeCcchhhhcC
Q 045784 68 LLPFE-GYDVVLDTQWLSTFG 87 (90)
Q Consensus 68 v~~~~-~~dvILG~~wL~~~~ 87 (90)
+.+.. ....|||..||+.+.
T Consensus 287 i~~~~~~~~~IlG~~fl~~~y 307 (323)
T 1izd_A 287 IQSNSGIGFSIFGDVFLKSQY 307 (323)
T ss_dssp EEECTTTSSEEECHHHHTTEE
T ss_pred EEcCCCCCcEEEChHHhcCEE
Confidence 22222 245899999999764
No 23
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=94.48 E-value=0.18 Score=34.19 Aligned_cols=81 Identities=9% Similarity=0.087 Sum_probs=49.3
Q ss_pred EECCEE------EEEEEcCCCCcccccHHhhhee----eEEe-cCCC-eeeeec--eeeeeEEEEeceeEEee-------
Q 045784 7 RLVHKV------VTVLIDSRRTHNFVRQELAVKL----NVMV-ASGE-RFSSLG--TCLQTLIKLQGVPLIVD------- 65 (90)
Q Consensus 7 ~i~~~~------~~aLiDsGA~~~~i~~~~a~~l----~v~~-a~G~-~~~~~~--~~~~~~i~i~~~~~~~~------- 65 (90)
.++++. ..+++|||++..++.++.++++ .... .+|. .+.|.. ..+.+.+.+++..+...
T Consensus 196 ~v~~~~~~~~~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~~~~~g~~~~~C~~~~~~p~i~f~f~g~~~~l~~~~y~~~ 275 (320)
T 4aa9_A 196 TINGVAVACVGGCQAILDTGTSVLFGPSSDILKIQMAIGATENRYGEFDVNCGNLRSMPTVVFEINGRDYPLSPSAYTSK 275 (320)
T ss_dssp EETTEEEESTTCEEEEECTTCSSEEEEHHHHHHHHHHTTCEECTTSCEEECGGGGGGCCCEEEEETTEEEEECHHHHEEE
T ss_pred EECCEEeccCCCcEEEEECCCCcEECCHHHHHHHHHHhCCcccCCCcEEEeCCCCCcCceEEEEECCEEEEECHHHhccC
Confidence 456654 4799999999999999999888 1111 2232 223322 23456777777654321
Q ss_pred ----EE--EcC-CCCceEEeCcchhhhcC
Q 045784 66 ----FY--LLP-FEGYDVVLDTQWLSTFG 87 (90)
Q Consensus 66 ----~~--v~~-~~~~dvILG~~wL~~~~ 87 (90)
+. +.+ ..+...|||..||+.+.
T Consensus 276 ~~~~C~~~i~~~~~~~~~ilG~~fl~~~y 304 (320)
T 4aa9_A 276 DQGFCTSGFQGDNNSELWILGDVFIREYY 304 (320)
T ss_dssp ETTEEEESEEEETTCCCEEECHHHHTTEE
T ss_pred CCCeEEEEEEcCCCCCcEEEChHHhcceE
Confidence 11 112 12245899999999864
No 24
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=94.44 E-value=0.058 Score=36.91 Aligned_cols=75 Identities=15% Similarity=0.151 Sum_probs=46.8
Q ss_pred EEEEEcCCCCcccccHHhhhee-----eEEecCCC-eeeeec--eeeeeEEEEeceeEEee-----------EE--EcCC
Q 045784 13 VTVLIDSRRTHNFVRQELAVKL-----NVMVASGE-RFSSLG--TCLQTLIKLQGVPLIVD-----------FY--LLPF 71 (90)
Q Consensus 13 ~~aLiDsGA~~~~i~~~~a~~l-----~v~~a~G~-~~~~~~--~~~~~~i~i~~~~~~~~-----------~~--v~~~ 71 (90)
..+++|||++..++.++.++++ .....+|. ...|.. ..+.+.+.+++..+... +. +.+.
T Consensus 212 ~~aiiDSGTt~~~lp~~~~~~l~~~~~~~~~~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~y~~~~~g~C~~~~~~~ 291 (329)
T 1htr_B 212 CQAIVDTGTSLLTVPQQYMSALLQATGAQEDEYGQFLVNCNSIQNLPSLTFIINGVEFPLPPSSYILSNNGYCTVGVEPT 291 (329)
T ss_dssp EEEEECTTCCSEEEEGGGHHHHHHHHTCEECTTSCEEECGGGGGGSCCEEEEETTEEEEECHHHHEEECSSCEEESEEEE
T ss_pred ceEEEecCCccEECCHHHHHHHHHHhCCeecCCCeEEEeCCCcccCCcEEEEECCEEEEECHHHhcccCCCEEEEEEEEC
Confidence 5799999999999999999888 11122332 233322 23556777777655321 11 2221
Q ss_pred -----CCc-eEEeCcchhhhcC
Q 045784 72 -----EGY-DVVLDTQWLSTFG 87 (90)
Q Consensus 72 -----~~~-dvILG~~wL~~~~ 87 (90)
.+. ..|||..||+.+.
T Consensus 292 ~~~~~~~~~~~iLG~~fl~~~y 313 (329)
T 1htr_B 292 YLSSQNGQPLWILGDVFLRSYY 313 (329)
T ss_dssp CCCCTTSSCEEEECHHHHTTEE
T ss_pred CCCCCCCCceEEEChHHhccEE
Confidence 133 6899999999764
No 25
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=94.36 E-value=0.2 Score=34.18 Aligned_cols=82 Identities=12% Similarity=0.152 Sum_probs=49.1
Q ss_pred EEECCEEE-----EEEEcCCCCcccccHHhhhee----eE-EecCCC-eeeeec--eeeeeEEEEeceeEEee-------
Q 045784 6 GRLVHKVV-----TVLIDSRRTHNFVRQELAVKL----NV-MVASGE-RFSSLG--TCLQTLIKLQGVPLIVD------- 65 (90)
Q Consensus 6 ~~i~~~~~-----~aLiDsGA~~~~i~~~~a~~l----~v-~~a~G~-~~~~~~--~~~~~~i~i~~~~~~~~------- 65 (90)
..++++.+ .+++|||++..++.++.++++ .. .-.+|. .+.|.. ..+.+.+.+++..+...
T Consensus 201 i~v~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~y~~~ 280 (329)
T 1dpj_A 201 IGLGDEYAELESHGAAIDTGTSLITLPSGLAEMINAEIGAKKGWTGQYTLDCNTRDNLPDLIFNFNGYNFTIGPYDYTLE 280 (329)
T ss_dssp EEETTEEEECSSCEEEECTTCSCEEECHHHHHHHHHHHTCEECTTSSEEECGGGGGGCCCEEEEETTEEEEECTTTSEEE
T ss_pred EEECCeEecCCCccEEeeCCCCcEECCHHHHHHHHHHhCCccCCCCeEEEECCCCCcCCcEEEEECCEEEEECHHHhEec
Confidence 34566544 599999999999999999888 11 112222 123322 23456677776544321
Q ss_pred ----EE--EcCC-----CCceEEeCcchhhhcC
Q 045784 66 ----FY--LLPF-----EGYDVVLDTQWLSTFG 87 (90)
Q Consensus 66 ----~~--v~~~-----~~~dvILG~~wL~~~~ 87 (90)
+. +.+. .+...|||..||+.+.
T Consensus 281 ~~~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y 313 (329)
T 1dpj_A 281 VSGSCISAITPMDFPEPVGPLAIVGDAFLRKYY 313 (329)
T ss_dssp ETTEEEECEEECCCCTTTCSEEEECHHHHTTEE
T ss_pred CCCEEEEEEEecccCCCCCCcEEEChHHhcceE
Confidence 11 2222 2356899999999764
No 26
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=93.99 E-value=0.21 Score=34.16 Aligned_cols=75 Identities=13% Similarity=0.064 Sum_probs=46.7
Q ss_pred EEEEEcCCCCcccccHHhhhee-----eEEecCCCeeeeec--eeeeeEEEEeceeEEee---E------------E--E
Q 045784 13 VTVLIDSRRTHNFVRQELAVKL-----NVMVASGERFSSLG--TCLQTLIKLQGVPLIVD---F------------Y--L 68 (90)
Q Consensus 13 ~~aLiDsGA~~~~i~~~~a~~l-----~v~~a~G~~~~~~~--~~~~~~i~i~~~~~~~~---~------------~--v 68 (90)
..+++|||.+..++.++.++++ .....+|-.+.|.. ..+.+.+.+++..+... + . +
T Consensus 221 ~~~iiDsGtt~~~lP~~~~~~i~~~~~~~~~~~g~~~~C~~~~~~p~i~f~f~g~~~~l~~~~~~~~~~~~~~~~C~~~i 300 (341)
T 3k1w_A 221 CLALVDTGASYISGSTSSIEKLMEALGAKKRLFDYVVKCNEGPTLPDISFHLGGKEYTLTSADYVFQESYSSKKLCTLAI 300 (341)
T ss_dssp EEEEECTTCSSEEECHHHHHHHHHHHTCEECSSCEEEEGGGGGGCCCEEEEETTEEEEECHHHHBCCSCCCTTSEEEBSE
T ss_pred CEEEEECCCChhcCCHHHHHHHHHHcCCeecCCCeEEeCCCCCcCCcEEEEECCEEEEECHHHheeEccCCCCCeEEeEE
Confidence 5799999999999999999888 11222342233332 23456777777654321 1 1 1
Q ss_pred cCC-----CCceEEeCcchhhhcC
Q 045784 69 LPF-----EGYDVVLDTQWLSTFG 87 (90)
Q Consensus 69 ~~~-----~~~dvILG~~wL~~~~ 87 (90)
.+. .+...|||..||+.+.
T Consensus 301 ~~~~~~~~~~~~~iLG~~fl~~~y 324 (341)
T 3k1w_A 301 HAMDIPPPTGPTWALGATFIRKFY 324 (341)
T ss_dssp EECCCCTTTCSCEEECHHHHTTEE
T ss_pred EecccCCCCCCeEEEChHHhcceE
Confidence 111 1345899999999864
No 27
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=93.91 E-value=0.14 Score=35.18 Aligned_cols=29 Identities=14% Similarity=0.179 Sum_probs=24.0
Q ss_pred EEECC-EEE----EEEEcCCCCcccccHHhhhee
Q 045784 6 GRLVH-KVV----TVLIDSRRTHNFVRQELAVKL 34 (90)
Q Consensus 6 ~~i~~-~~~----~aLiDsGA~~~~i~~~~a~~l 34 (90)
..+++ +.+ .+++|||.+..++.++.++++
T Consensus 195 i~v~~~~~l~~~~~aiiDSGTt~~~lP~~~~~~l 228 (340)
T 1wkr_A 195 IRYGSSTSILSSTAGIVDTGTTLTLIASDAFAKY 228 (340)
T ss_dssp EEETTTEEEEEEEEEEECTTBCSEEECHHHHHHH
T ss_pred EEECCCeEccCCCeEEEeCCcccccCCHHHHHHH
Confidence 45666 443 799999999999999999887
No 28
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=93.88 E-value=0.38 Score=34.76 Aligned_cols=78 Identities=14% Similarity=0.164 Sum_probs=48.3
Q ss_pred EEEEEEEC--CEEEEEEEcCCCCcccccHHhh------hee-----------------eEEecCCCeeeeeceeeeeEEE
Q 045784 2 IRVIGRLV--HKVVTVLIDSRRTHNFVRQELA------VKL-----------------NVMVASGERFSSLGTCLQTLIK 56 (90)
Q Consensus 2 ~~v~~~i~--~~~~~aLiDsGA~~~~i~~~~a------~~l-----------------~v~~a~G~~~~~~~~~~~~~i~ 56 (90)
..++..|+ .++..+++||||+..++...-. ... .+..++|. ..|....=.+.
T Consensus 139 Y~~~I~IGTPpQ~~~vi~DTGSs~lWV~s~~C~s~~C~~~~~ydps~SsT~~~~~~~f~i~YgdGs---~~G~~~~Dtv~ 215 (451)
T 3qvc_A 139 SFGEAKLGDNGQKFNFLFHTASSNVWVPSIKCTSESCESKNHYDSSKSKTYEKDDTPVKLTSKAGT---ISGIFSKDLVT 215 (451)
T ss_dssp EEEEEEETTTTEEEEEEEESSBCSEEEEBTTCCSGGGTTSCCBCGGGCTTCEEEEEEEEEECSSEE---EEEEEEEEEEE
T ss_pred EEEEEEECCCCcEEEEEEcCCCccEEEecCCCCccccCCCCCCCCCCCcccccCCCEEEEEECCCE---EEEEEEEEEEE
Confidence 35667787 7999999999999998865322 111 33444443 33433333566
Q ss_pred EeceeEEeeEEEcCC----------CCceEEeCcch
Q 045784 57 LQGVPLIVDFYLLPF----------EGYDVVLDTQW 82 (90)
Q Consensus 57 i~~~~~~~~~~v~~~----------~~~dvILG~~w 82 (90)
+++......|-+... ..+|-|||+.+
T Consensus 216 igg~~v~~~Fg~a~~t~~~~~~f~~~~~dGILGLg~ 251 (451)
T 3qvc_A 216 IGKLSVPYKFIEMTEIVGFEPFYSESDVDGVFGLGW 251 (451)
T ss_dssp ETTEEEEEEEEEEEEEEECTTHHHHSCCCEEEECSS
T ss_pred ECCEEEEEEEEEEEeccccCCCccCCCCCEEEecCC
Confidence 777665544544432 34789999876
No 29
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=93.71 E-value=0.12 Score=35.41 Aligned_cols=77 Identities=10% Similarity=0.061 Sum_probs=47.5
Q ss_pred EEEEEEEcCCCCcccccHHhhhee--eE---Ee--cCCC-eeeeeceeeeeEEEEeceeEEee--------------EE-
Q 045784 11 KVVTVLIDSRRTHNFVRQELAVKL--NV---MV--ASGE-RFSSLGTCLQTLIKLQGVPLIVD--------------FY- 67 (90)
Q Consensus 11 ~~~~aLiDsGA~~~~i~~~~a~~l--~v---~~--a~G~-~~~~~~~~~~~~i~i~~~~~~~~--------------~~- 67 (90)
.+..+++|||.+..++.++.++++ .+ .. .+|. .+.|....+.+.+.+++..+..+ +.
T Consensus 206 ~~~~aiiDSGTs~~~lP~~~~~~l~~~i~~a~~~~~~g~~~~~C~~~~P~i~f~fgg~~~~l~~~~~~~~~~~~~~~C~~ 285 (323)
T 1bxo_A 206 DGFSGIADTGTTLLLLDDSVVSQYYSQVSGAQQDSNAGGYVFDCSTNLPDFSVSISGYTATVPGSLINYGPSGDGSTCLG 285 (323)
T ss_dssp EEEEEEECTTCSSEEECHHHHHHHHTTSTTCEEETTTTEEEECTTCCCCCEEEEETTEEEEECHHHHEEEECSSSSCEEE
T ss_pred CCceEEEeCCCCceeCCHHHHHHHHHhCCCceEcCcCCEEEEECCCCCceEEEEECCEEEEECHHHeEEeccCCCCeEEE
Confidence 456899999999999999998877 11 11 1221 23343334566777777654321 11
Q ss_pred -EcCCC-CceEEeCcchhhhcC
Q 045784 68 -LLPFE-GYDVVLDTQWLSTFG 87 (90)
Q Consensus 68 -v~~~~-~~dvILG~~wL~~~~ 87 (90)
+.+.. ....|||..||+.+.
T Consensus 286 ~i~~~~~~~~~ILG~~fl~~~y 307 (323)
T 1bxo_A 286 GIQSNSGIGFSIFGDIFLKSQY 307 (323)
T ss_dssp SEEECTTCSSEEECHHHHTTEE
T ss_pred EEECCCCCCcEEEChHHHcCEE
Confidence 11222 235899999999764
No 30
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=93.68 E-value=0.42 Score=34.64 Aligned_cols=77 Identities=17% Similarity=0.226 Sum_probs=47.5
Q ss_pred EEEEEEC--CEEEEEEEcCCCCcccccHHhh------he--e---------------eEEecCCCeeeeeceeeeeEEEE
Q 045784 3 RVIGRLV--HKVVTVLIDSRRTHNFVRQELA------VK--L---------------NVMVASGERFSSLGTCLQTLIKL 57 (90)
Q Consensus 3 ~v~~~i~--~~~~~aLiDsGA~~~~i~~~~a------~~--l---------------~v~~a~G~~~~~~~~~~~~~i~i 57 (90)
.++..|+ .++..+++||||+..++...-. .. . .+..++|. ..|....=.+.+
T Consensus 141 ~~~I~IGTP~Q~~~vi~DTGSs~lWV~~~~C~~~~C~~~~~ydps~SsT~~~~~~~~~i~YgdGs---~~G~~~~Dtv~i 217 (453)
T 2bju_A 141 YGDAEVGDNQQPFTFILDTGSANLWVPSVKCTTAGCLTKHLYDSSKSRTYEKDGTKVEMNYVSGT---VSGFFSKDLVTV 217 (453)
T ss_dssp EEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSTTGGGSCCBCGGGCTTCEEEEEEEEEECSSSE---EEEEEEEEEEEE
T ss_pred EEEEEECCCCeEEEEEEECCCcceEEeccCCCccccCCCCcCCCccCCceeECCcEEEEEcCCCC---eEEEEEEEEEEE
Confidence 4567777 8999999999999998854321 11 0 34445554 234443335667
Q ss_pred eceeEEeeEEEcCC----------CCceEEeCcch
Q 045784 58 QGVPLIVDFYLLPF----------EGYDVVLDTQW 82 (90)
Q Consensus 58 ~~~~~~~~~~v~~~----------~~~dvILG~~w 82 (90)
++......|-+... ..+|-|||+.|
T Consensus 218 g~~~v~~~Fg~a~~~~~~g~~f~~~~~dGIlGLg~ 252 (453)
T 2bju_A 218 GNLSLPYKFIEVIDTNGFEPTYTASTFDGILGLGW 252 (453)
T ss_dssp TTEEEEEEEEEEEECGGGTTHHHHSSCCEEEECSC
T ss_pred eCcEEEEEEEEEEEecccCccccccCCceeEeccC
Confidence 77655544444321 24799999876
No 31
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=93.51 E-value=0.96 Score=31.86 Aligned_cols=78 Identities=14% Similarity=0.207 Sum_probs=47.6
Q ss_pred EEEEEEC--CEEEEEEEcCCCCcccccHHhh--------he--e---------------eEEecCCCeeeeeceeeeeEE
Q 045784 3 RVIGRLV--HKVVTVLIDSRRTHNFVRQELA--------VK--L---------------NVMVASGERFSSLGTCLQTLI 55 (90)
Q Consensus 3 ~v~~~i~--~~~~~aLiDsGA~~~~i~~~~a--------~~--l---------------~v~~a~G~~~~~~~~~~~~~i 55 (90)
.++..|. .++..+++||||+..++...-. .. + .+...+|. ..|....=.+
T Consensus 64 ~~~I~IGTP~Q~f~vi~DTGSs~lWV~s~~C~~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs---~~G~~~~Dtv 140 (383)
T 2x0b_A 64 YGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNGTELTLRYSTGT---VSGFLSQDII 140 (383)
T ss_dssp EEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTSHHHHTSCCBCGGGCTTCEEEEEEEEEECSSCE---EEEEEEEEEE
T ss_pred EEEEEECCCCcEEEEEEeCCCCCeEEeccCCCCCcccccCCCCCCCCCCCcEEECCcEEEEEcCCcc---EEEEEEeeEE
Confidence 4566676 6999999999999998854322 11 1 34445554 2344433356
Q ss_pred EEeceeEEeeEEEcC--------CCCceEEeCcchh
Q 045784 56 KLQGVPLIVDFYLLP--------FEGYDVVLDTQWL 83 (90)
Q Consensus 56 ~i~~~~~~~~~~v~~--------~~~~dvILG~~wL 83 (90)
.+++......|-+.. ...+|-|||+.|=
T Consensus 141 ~ig~~~v~~~Fg~a~~~~g~~f~~~~~dGIlGLg~~ 176 (383)
T 2x0b_A 141 TVGGITVTQMFGEVTEMPALPFMLAEFDGVVGMGFI 176 (383)
T ss_dssp EETTEEEEEEEEEEEECCHHHHTTCSSSEEEECSCG
T ss_pred EEcCceEEEEEEEEEecCCcccccCCCceEeccCCC
Confidence 677765544443332 2358999998763
No 32
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=93.43 E-value=0.91 Score=31.66 Aligned_cols=78 Identities=14% Similarity=0.141 Sum_probs=48.2
Q ss_pred EEEEEEEC--CEEEEEEEcCCCCcccccHHhhhe--------e---------------eEEecCCCeeeeeceeeeeEEE
Q 045784 2 IRVIGRLV--HKVVTVLIDSRRTHNFVRQELAVK--------L---------------NVMVASGERFSSLGTCLQTLIK 56 (90)
Q Consensus 2 ~~v~~~i~--~~~~~aLiDsGA~~~~i~~~~a~~--------l---------------~v~~a~G~~~~~~~~~~~~~i~ 56 (90)
...+..|. .++..+++||||+..++....... . .+...+|. ..|....=.+.
T Consensus 58 Y~~~i~iGTPpQ~~~v~~DTGSs~lWV~s~~C~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs---~~G~~~~Dtv~ 134 (370)
T 3psg_A 58 YFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCSSLACSDHNQFNPDDSSTFEATSQELSITYGTGS---MTGILGYDTVQ 134 (370)
T ss_dssp EEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGGTTSCCBCGGGCTTCEEEEEEEEEESSSCE---EEEEEEEEEEE
T ss_pred EEEEEEEcCCCCEEEEEEeCCCCccEEECCCCCCcccCCCCCCCCccCcCcEECCcEEEEEeCCce---EEEEEEEEEEe
Confidence 34667777 499999999999999886432211 0 34445554 23444333567
Q ss_pred EeceeEE-eeEEEcCC--------CCceEEeCcch
Q 045784 57 LQGVPLI-VDFYLLPF--------EGYDVVLDTQW 82 (90)
Q Consensus 57 i~~~~~~-~~~~v~~~--------~~~dvILG~~w 82 (90)
+++.... ..|-+... ..+|-|||+.|
T Consensus 135 ig~~~v~~~~Fg~a~~~~~~~~~~~~~dGIlGLg~ 169 (370)
T 3psg_A 135 VGGISDTNQIFGLSETEPGSFLYYAPFDGILGLAY 169 (370)
T ss_dssp ETTEEEEEEEEEEECSCCCGGGGGCSCSEEEECSC
T ss_pred eCCcccCCeEEEEEEeecccccccCCccceeccCC
Confidence 7776654 34544432 23799999976
No 33
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=93.27 E-value=0.65 Score=31.75 Aligned_cols=77 Identities=17% Similarity=0.225 Sum_probs=47.1
Q ss_pred EEEEEEEC--CEEEEEEEcCCCCcccccHHhhhee-------------eEEecCCCeeeeeceeeeeEEEEeceeEE-ee
Q 045784 2 IRVIGRLV--HKVVTVLIDSRRTHNFVRQELAVKL-------------NVMVASGERFSSLGTCLQTLIKLQGVPLI-VD 65 (90)
Q Consensus 2 ~~v~~~i~--~~~~~aLiDsGA~~~~i~~~~a~~l-------------~v~~a~G~~~~~~~~~~~~~i~i~~~~~~-~~ 65 (90)
..++..|. .++..+++||||+..++..+ ..+ .+...+|. ..|....=.+.+++.... ..
T Consensus 14 Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~--~~y~~s~Ss~~~~~~~~i~Yg~Gs---~~G~~~~Dtv~~g~~~v~~~~ 88 (340)
T 1wkr_A 14 YVVNVGVGSPATTYSLLVDTGSSNTWLGAD--KSYVKTSTSSATSDKVSVTYGSGS---FSGTEYTDTVTLGSLTIPKQS 88 (340)
T ss_dssp EEEEEEETTTTEEEEEEEETTCCCCEECSS--SCCCCCTTCEEEEEEEEEECSSCE---EEEEEEEEEEEETTEEEEEEE
T ss_pred EEEEEEECCCCcEEEEEEeCCChhheecCC--CccCCcCCccccCceEEEEECCcE---EEEEEEEEEEEECCEEEcceE
Confidence 35677788 89999999999999988642 111 44555664 234443334566664432 22
Q ss_pred EEEcC----CCCceEEeCcchh
Q 045784 66 FYLLP----FEGYDVVLDTQWL 83 (90)
Q Consensus 66 ~~v~~----~~~~dvILG~~wL 83 (90)
|-+.. ...+|-|||+.+-
T Consensus 89 fg~~~~~~~~~~~~GilGLg~~ 110 (340)
T 1wkr_A 89 IGVASRDSGFDGVDGILGVGPV 110 (340)
T ss_dssp EEEEEEEESCTTCSEEEECSCG
T ss_pred EEEEEccCCCcCCCcEEECCcc
Confidence 32221 2368999998763
No 34
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=92.94 E-value=0.9 Score=30.91 Aligned_cols=27 Identities=7% Similarity=-0.021 Sum_probs=23.0
Q ss_pred EEEEEEECCEEEEEEEcCCCCcccccH
Q 045784 2 IRVIGRLVHKVVTVLIDSRRTHNFVRQ 28 (90)
Q Consensus 2 ~~v~~~i~~~~~~aLiDsGA~~~~i~~ 28 (90)
..++..|..++..+++||||+..++..
T Consensus 17 Y~~~i~iG~Q~~~v~~DTGSs~lWv~~ 43 (323)
T 1bxo_A 17 YITPVTIGGTTLNLNFDTGSADLWVFS 43 (323)
T ss_dssp EEEEEEETTEEEEEEEETTCCCEEECB
T ss_pred EEEEEEECCEEEEEEEeCCCcceEEec
Confidence 356778889999999999999998854
No 35
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=92.72 E-value=1 Score=30.66 Aligned_cols=27 Identities=7% Similarity=-0.029 Sum_probs=23.0
Q ss_pred EEEEEEECCEEEEEEEcCCCCcccccH
Q 045784 2 IRVIGRLVHKVVTVLIDSRRTHNFVRQ 28 (90)
Q Consensus 2 ~~v~~~i~~~~~~aLiDsGA~~~~i~~ 28 (90)
..++..|..++..+++||||+..++..
T Consensus 17 Y~~~i~iG~q~~~v~~DTGSs~lWv~~ 43 (323)
T 1izd_A 17 YITQVTVGDDTLGLDFDTGSADLWVFS 43 (323)
T ss_dssp EEEEEEETTEEEEEEEETTCCCEEECB
T ss_pred EEEEEEECCEEEEEEEcCCCcceEEec
Confidence 356778889999999999999998854
No 36
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=92.47 E-value=0.59 Score=32.19 Aligned_cols=82 Identities=13% Similarity=0.148 Sum_probs=48.3
Q ss_pred EEECCEE------EEEEEcCCCCcccccHHhhhee----eEEecCCC-eeeeec--eeeeeEEEEeceeEEe--------
Q 045784 6 GRLVHKV------VTVLIDSRRTHNFVRQELAVKL----NVMVASGE-RFSSLG--TCLQTLIKLQGVPLIV-------- 64 (90)
Q Consensus 6 ~~i~~~~------~~aLiDsGA~~~~i~~~~a~~l----~v~~a~G~-~~~~~~--~~~~~~i~i~~~~~~~-------- 64 (90)
..++++. ..+++|||++..++.++.++++ ......|. .+.|.. ..+.+.+.+++..+..
T Consensus 210 i~v~~~~~~~~~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~yi~~ 289 (351)
T 1tzs_A 210 IQVGGTVMFCSEGCQAIVDTGTSLITGPSDKIKQLQNAIGAAPVDGEYAVECANLNVMPDVTFTINGVPYTLSPTAYTLL 289 (351)
T ss_dssp EEETTEEEECTTCEEEEECTTCSSEEECHHHHHHHHHHHTCEECSSSEEECGGGGGGSCCEEEEETTEEEEECTTTSEEC
T ss_pred EEECCceEEcCCCceEEeccCCcceeCCHHHHHHHHHHhCCcccCCeEEEeCCCCccCCcEEEEECCEEEEECHHHhEee
Confidence 4566665 4799999999999999999887 11111122 122321 2345666666654421
Q ss_pred -------eEE--EcCC-----CCceEEeCcchhhhcC
Q 045784 65 -------DFY--LLPF-----EGYDVVLDTQWLSTFG 87 (90)
Q Consensus 65 -------~~~--v~~~-----~~~dvILG~~wL~~~~ 87 (90)
.+. +.+. .+...|||..||+.+.
T Consensus 290 ~~~~~~~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y 326 (351)
T 1tzs_A 290 DFVDGMQFCSSGFQGLDIHPPAGPLWILGDVFIRQFY 326 (351)
T ss_dssp C-----CCEEESEEECCCCTTTCSCEEECHHHHHHEE
T ss_pred ccCCCCCeEEEEEEECCCCCCCCCeEEEChHHhhheE
Confidence 111 2221 2346899999999864
No 37
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=92.44 E-value=0.34 Score=35.08 Aligned_cols=82 Identities=7% Similarity=0.036 Sum_probs=49.2
Q ss_pred EEECC---EEEEEEEcCCCCcccccHHhhhee-----eEEecCC-C-eeeeec-eeeeeEEEEeceeEEee---------
Q 045784 6 GRLVH---KVVTVLIDSRRTHNFVRQELAVKL-----NVMVASG-E-RFSSLG-TCLQTLIKLQGVPLIVD--------- 65 (90)
Q Consensus 6 ~~i~~---~~~~aLiDsGA~~~~i~~~~a~~l-----~v~~a~G-~-~~~~~~-~~~~~~i~i~~~~~~~~--------- 65 (90)
..+++ ....+++|||++..++.++.++++ .....+| . ...|.. ..+.+.+.++|..+..+
T Consensus 323 I~Vgg~~~~~~~aIiDSGTsl~~lP~~~~~~l~~~i~~~~~~~g~~~~v~C~~~~~P~itf~fgg~~~~l~~~~yi~~~~ 402 (453)
T 2bju_A 323 AHVGNIMLEKANCIVDSGTSAITVPTDFLNKMLQNLDVIKVPFLPFYVTLCNNSKLPTFEFTSENGKYTLEPEYYLQHIE 402 (453)
T ss_dssp EEETTEEEEEEEEEECTTCCSEEECHHHHHHHTTTSSCEECTTSSCEEEETTCTTCCCEEEECSSCEEEECHHHHEEECT
T ss_pred EEECcEEeccccEEEcCCCCeEecCHHHHHHHHHHhCCcccCCCceEEEecCCCCCCcEEEEECCEEEEECHHHhEeecc
Confidence 44555 346799999999999999999888 1112233 1 223322 23456666666544321
Q ss_pred ------EE--EcCCC--CceEEeCcchhhhcC
Q 045784 66 ------FY--LLPFE--GYDVVLDTQWLSTFG 87 (90)
Q Consensus 66 ------~~--v~~~~--~~dvILG~~wL~~~~ 87 (90)
+. +.+.. ....|||..||+.+.
T Consensus 403 ~~g~~~C~~~~~~~~~~~~~~ILGd~Flr~~y 434 (453)
T 2bju_A 403 DVGPGLCMLNIIGLDFPVPTFILGDPFMRKYF 434 (453)
T ss_dssp TTSTTEEEECEEECCCSSCEEEECHHHHHHEE
T ss_pred cCCCceEEEEEEeCCCCCCCEEECHHHhhcEE
Confidence 11 22222 236899999999764
No 38
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=92.30 E-value=0.27 Score=34.47 Aligned_cols=76 Identities=18% Similarity=0.329 Sum_probs=45.2
Q ss_pred EEEEEC--CEEEEEEEcCCCCcccccHH-h-----hhe--e---------------eEEecCCCeeeeeceeeeeEEEEe
Q 045784 4 VIGRLV--HKVVTVLIDSRRTHNFVRQE-L-----AVK--L---------------NVMVASGERFSSLGTCLQTLIKLQ 58 (90)
Q Consensus 4 v~~~i~--~~~~~aLiDsGA~~~~i~~~-~-----a~~--l---------------~v~~a~G~~~~~~~~~~~~~i~i~ 58 (90)
++..|+ .++..+++||||+..++... | ... + .+...+|. ..|....=.+.++
T Consensus 66 ~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs---~~G~~~~Dtv~ig 142 (375)
T 1miq_A 66 GEGEVGDNHQKFMLIFDTGSANLWVPSKKCNSSGCSIKNLYDSSKSKSYEKDGTKVDITYGSGT---VKGFFSKDLVTLG 142 (375)
T ss_dssp CCCEETTTTEECCEEEETTCCCEEEEBTTCCSSGGGGSCCBCGGGCTTCEEEEEEEEEEETTEE---EEEEEEEEEEEET
T ss_pred EEEEECCCCeEEEEEEeCCCcceEEccCCCCcccccCCCcCCCccCCceEECCcEEEEEeCCCe---EEEEEEEEEEEEc
Confidence 445666 79999999999999987543 2 111 0 23344443 2344333356666
Q ss_pred ceeEEeeEEEcCC----------CCceEEeCcch
Q 045784 59 GVPLIVDFYLLPF----------EGYDVVLDTQW 82 (90)
Q Consensus 59 ~~~~~~~~~v~~~----------~~~dvILG~~w 82 (90)
+......|-+... ..+|-|||+.|
T Consensus 143 ~~~v~~~Fg~~~~~~~~~~~f~~~~~dGilGLg~ 176 (375)
T 1miq_A 143 HLSMPYKFIEVTDTDDLEPIYSSVEFDGILGLGW 176 (375)
T ss_dssp TEEEEEEEEEEEECGGGTTHHHHSCCCEEEECSS
T ss_pred CceECcEEEEEEeccccccccccCCCceEEeCCC
Confidence 6654444443332 45799999876
No 39
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=92.16 E-value=0.39 Score=32.80 Aligned_cols=28 Identities=36% Similarity=0.533 Sum_probs=23.8
Q ss_pred EECCEE-----EEEEEcCCCCcccccHHhhhee
Q 045784 7 RLVHKV-----VTVLIDSRRTHNFVRQELAVKL 34 (90)
Q Consensus 7 ~i~~~~-----~~aLiDsGA~~~~i~~~~a~~l 34 (90)
.++++. ..+++|||.+..++.++.++++
T Consensus 202 ~v~g~~~~~~~~~~iiDSGtt~~~lP~~~~~~i 234 (342)
T 3pvk_A 202 EVSGKTINTDNVDVLLDSGTTITYLQQDLADQI 234 (342)
T ss_dssp EETTEEEEEEEEEEEECTTCSSEEECHHHHHHH
T ss_pred EECCEEecCCCceEEEeCCCCCeecCHHHHHHH
Confidence 456654 5799999999999999999988
No 40
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=92.04 E-value=0.27 Score=33.57 Aligned_cols=77 Identities=14% Similarity=0.104 Sum_probs=47.1
Q ss_pred EEEEEEEcCCCCcccccHHhhhee--eE---Ee--cCC-CeeeeeceeeeeEEEEeceeEEee---------------EE
Q 045784 11 KVVTVLIDSRRTHNFVRQELAVKL--NV---MV--ASG-ERFSSLGTCLQTLIKLQGVPLIVD---------------FY 67 (90)
Q Consensus 11 ~~~~aLiDsGA~~~~i~~~~a~~l--~v---~~--a~G-~~~~~~~~~~~~~i~i~~~~~~~~---------------~~ 67 (90)
....+++|||++..++.++.++++ .+ .. .+| -.+.|....+.+.+.+++..+..+ +.
T Consensus 207 ~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~a~~~~~~g~~~~~C~~~~P~i~f~fgg~~~~i~~~~~~~~~~~~~~~~C~ 286 (325)
T 1ibq_A 207 SGFSAIADTGTTLILLDDEIVSAYYEQVSGAQESYEAGGYVFSCSTDLPDFTVVIGDYKAVVPGKYINYAPVSTGSSTCY 286 (325)
T ss_dssp CCEEEEECTTCCSEEECHHHHHHHHTTSTTCBCCSSSSSCEEETTCCCCCEEEEETTEEEEECHHHHEEEESSTTCSEEE
T ss_pred CCceEEEeCCCCcEeCCHHHHHHHHHhCCCceEcCcCCeEEEEcCCCCCcEEEEECCEEEEECHHHhcccccCCCCCeEE
Confidence 356799999999999999998887 22 11 112 223443334566777776554321 11
Q ss_pred --EcCCC-CceEEeCcchhhhcC
Q 045784 68 --LLPFE-GYDVVLDTQWLSTFG 87 (90)
Q Consensus 68 --v~~~~-~~dvILG~~wL~~~~ 87 (90)
+.+.. ....|||..||+.+.
T Consensus 287 ~~i~~~~~~~~~iLG~~fl~~~y 309 (325)
T 1ibq_A 287 GGIQSNSGLGLSILGDVFLKSQY 309 (325)
T ss_dssp ESEEECTTTCSEEECHHHHTTEE
T ss_pred EEEEcCCCCCceEEChHHhcCEE
Confidence 11222 235899999999764
No 41
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=92.02 E-value=0.24 Score=34.28 Aligned_cols=29 Identities=14% Similarity=0.137 Sum_probs=23.9
Q ss_pred EEECCEEE------EEE-EcCCCCcccccHHhhhee
Q 045784 6 GRLVHKVV------TVL-IDSRRTHNFVRQELAVKL 34 (90)
Q Consensus 6 ~~i~~~~~------~aL-iDsGA~~~~i~~~~a~~l 34 (90)
..++++.+ .++ ||||++..++.++.++++
T Consensus 218 i~v~~~~~~~~~~~~ai~iDSGTt~~~lP~~~~~~l 253 (361)
T 1mpp_A 218 VKIDGSDAVSFDGAQAFTIDTGTNFFIAPSSFAEKV 253 (361)
T ss_dssp EEETTEEEEEEEEEEEEEEETTCCSEEEEHHHHHHH
T ss_pred EEECCeeeccCCCCEEEEECCCCCceeCCHHHHHHH
Confidence 34666543 689 999999999999999888
No 42
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=92.02 E-value=0.52 Score=32.19 Aligned_cols=77 Identities=9% Similarity=0.050 Sum_probs=46.7
Q ss_pred EEEEEEEcCCCCcccccHHhhhee--eE---Ee--cCCC-eeeeeceeeeeEEEEeceeEEee---------------EE
Q 045784 11 KVVTVLIDSRRTHNFVRQELAVKL--NV---MV--ASGE-RFSSLGTCLQTLIKLQGVPLIVD---------------FY 67 (90)
Q Consensus 11 ~~~~aLiDsGA~~~~i~~~~a~~l--~v---~~--a~G~-~~~~~~~~~~~~i~i~~~~~~~~---------------~~ 67 (90)
....+++|||.+..++.++.++++ .+ .. .+|. ...|....+.+.+.+++..+..+ +.
T Consensus 211 ~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~a~~~~~~g~~~~~C~~~~P~i~f~fgg~~~~ip~~~~~~~~~~~~~~~C~ 290 (329)
T 1oew_A 211 TSIDGIADTGTTLLYLPATVVSAYWAQVSGAKSSSSVGGYVFPCSATLPSFTFGVGSARIVIPGDYIDFGPISTGSSSCF 290 (329)
T ss_dssp EEEEEEECTTCCSEEECHHHHHHHHTTSTTCEEETTTTEEEEETTCCCCCEEEEETTEEEEECHHHHEEEESSTTCSEEE
T ss_pred CCceEEEeCCCCCEECCHHHHHHHHHhCCCcEEcCCCCEEEEECCCCCCcEEEEECCEEEEECHHHeeeeecCCCCCeEE
Confidence 356799999999999999998877 11 11 1121 23343334566677776554321 11
Q ss_pred --EcCCC-CceEEeCcchhhhcC
Q 045784 68 --LLPFE-GYDVVLDTQWLSTFG 87 (90)
Q Consensus 68 --v~~~~-~~dvILG~~wL~~~~ 87 (90)
+.+.. ....|||..||+.+.
T Consensus 291 ~~i~~~~~~~~~iLG~~fl~~~y 313 (329)
T 1oew_A 291 GGIQSSAGIGINIFGDVALKAAF 313 (329)
T ss_dssp ESEEESTTTSSEEECHHHHTTEE
T ss_pred EEEEeCCCCCceEEChHHhcCEE
Confidence 11222 245899999998763
No 43
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=91.88 E-value=1.7 Score=29.48 Aligned_cols=78 Identities=14% Similarity=0.175 Sum_probs=46.6
Q ss_pred EEEEEEEC--CEEEEEEEcCCCCcccccHH--------hhhee-----------------eEEecCCCeeeeeceeeeeE
Q 045784 2 IRVIGRLV--HKVVTVLIDSRRTHNFVRQE--------LAVKL-----------------NVMVASGERFSSLGTCLQTL 54 (90)
Q Consensus 2 ~~v~~~i~--~~~~~aLiDsGA~~~~i~~~--------~a~~l-----------------~v~~a~G~~~~~~~~~~~~~ 54 (90)
..++..|. .++..+++|||++..++... |...- .+..++|. ..|....=.
T Consensus 20 Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~gs---~~G~~~~D~ 96 (341)
T 3k1w_A 20 YYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNGTELTLRYSTGT---VSGFLSQDI 96 (341)
T ss_dssp EEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTCHHHHTSCCBCGGGCTTCEEEEEEEEEEETTEE---EEEEEEEEE
T ss_pred EEEEEEEcCCCcEEEEEEeCCCcceEEccCCCCCCCCcccCCCCCCCCcCcCeeECCCEEEEEECCcE---EEEEEEEEE
Confidence 34667777 59999999999999988532 21111 33444443 234433335
Q ss_pred EEEeceeEEeeEEEcC--------CCCceEEeCcch
Q 045784 55 IKLQGVPLIVDFYLLP--------FEGYDVVLDTQW 82 (90)
Q Consensus 55 i~i~~~~~~~~~~v~~--------~~~~dvILG~~w 82 (90)
+.+++......|-+.. ...+|-|||+.+
T Consensus 97 v~ig~~~v~~~fg~~~~~~~~~~~~~~~~GilGLg~ 132 (341)
T 3k1w_A 97 ITVGGITVTQMFGEVTEMPALPFMLAEFDGVVGMGF 132 (341)
T ss_dssp EEETTEEEEEEEEEEEECCHHHHTTCSSSEEEECSC
T ss_pred EEECCceeeEEEEEEEEccccccccCCcceEEECCc
Confidence 6667665533444332 223689999876
No 44
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=91.88 E-value=0.52 Score=33.20 Aligned_cols=75 Identities=13% Similarity=0.056 Sum_probs=47.6
Q ss_pred EEEEEcCCCCcccccHHhhhee----eEEecCCC-eeeeec--eeeeeEEEEeceeEEee---------------EE--E
Q 045784 13 VTVLIDSRRTHNFVRQELAVKL----NVMVASGE-RFSSLG--TCLQTLIKLQGVPLIVD---------------FY--L 68 (90)
Q Consensus 13 ~~aLiDsGA~~~~i~~~~a~~l----~v~~a~G~-~~~~~~--~~~~~~i~i~~~~~~~~---------------~~--v 68 (90)
..|++|||.+..+..++.++++ .....+|. .+.|.. ..+.+.+.++|..+... +. +
T Consensus 264 ~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~~g~~~v~C~~~~~~P~i~f~~~g~~~~l~~~~yi~~~~~~~~~~C~~~~ 343 (383)
T 2x0b_A 264 CLALVDTGASYISGSTSSIEKLMEALGAKKRLFDYVVKCNEGPTLPDISFHLGGKEYTLTSADYVFQESYSSKKLCTLAI 343 (383)
T ss_dssp EEEEECTTCSSEEECHHHHHHHHHHHTCEECSSCEEEEGGGTTTCCCEEEEETTEEEEECHHHHBCCCCCCTTSEEEBSE
T ss_pred cEEEEcCCCceEEcCHHHHHHHHHHhCCcccCCcEEEeccccccCceEEEEECCEEEEECHHHhEeeccCCCCCeEEEEE
Confidence 5799999999999999999888 11114443 234432 23567777777655321 11 1
Q ss_pred cCC-----CCceEEeCcchhhhcC
Q 045784 69 LPF-----EGYDVVLDTQWLSTFG 87 (90)
Q Consensus 69 ~~~-----~~~dvILG~~wL~~~~ 87 (90)
.+. .+...|||..||+++.
T Consensus 344 ~~~~~~~~~~~~~ILGd~Fl~~~y 367 (383)
T 2x0b_A 344 HAMDIPPPTGPTWALGATFIRKFY 367 (383)
T ss_dssp EECCCCTTTCSCEEECHHHHTTEE
T ss_pred EecccCCCCCCcEEEChHHhcceE
Confidence 111 2346899999999864
No 45
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=91.85 E-value=2 Score=29.10 Aligned_cols=26 Identities=23% Similarity=0.072 Sum_probs=21.6
Q ss_pred EEEEEEC--CEEEEEEEcCCCCcccccH
Q 045784 3 RVIGRLV--HKVVTVLIDSRRTHNFVRQ 28 (90)
Q Consensus 3 ~v~~~i~--~~~~~aLiDsGA~~~~i~~ 28 (90)
.++..|. .++..+++||||+..++..
T Consensus 17 ~~~i~iGtP~q~~~v~~DTGSs~~Wv~~ 44 (323)
T 3cms_A 17 FGKIYLGTPPQEFTVLFDTGSSDFWVPS 44 (323)
T ss_dssp EEEEEETTTTEEEEEEEETTCCCEEEEB
T ss_pred EEEEEECCCCeEEEEEEeCCccceEEcC
Confidence 4567777 6999999999999998853
No 46
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=91.70 E-value=0.53 Score=32.87 Aligned_cols=76 Identities=12% Similarity=0.155 Sum_probs=46.6
Q ss_pred EEEEEEcCCCCcccccHHhhhee----eEE-ecCCC-eeeeec--eeeeeEEEEeceeEEee---------------EEE
Q 045784 12 VVTVLIDSRRTHNFVRQELAVKL----NVM-VASGE-RFSSLG--TCLQTLIKLQGVPLIVD---------------FYL 68 (90)
Q Consensus 12 ~~~aLiDsGA~~~~i~~~~a~~l----~v~-~a~G~-~~~~~~--~~~~~~i~i~~~~~~~~---------------~~v 68 (90)
...|++|||.+..+..++.++++ ... -.+|. .+.|.. ..+.+.+.+++..+... |.-
T Consensus 253 ~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~~~g~~~v~C~~~~~lP~i~f~~~g~~~~l~~~~yi~~~~~~C~~~~~~ 332 (370)
T 3psg_A 253 GCQAIVDTGTSLLTGPTSAIANIQSDIGASENSDGEMVISCSSIDSLPDIVFTIDGVQYPLSPSAYILQDDDSCTSGFEG 332 (370)
T ss_dssp CEEEEECTTCCSEEEEHHHHHHHHHHTTCEECTTCCEECCGGGGGGCCCEEEEETTEEEEECHHHHEEECSSCEEESEEE
T ss_pred CceEEEcCCCCcEECCHHHHHHHHHHhCCcccCCCcEEEECCCcccCCcEEEEECCEEEEECHHHhcccCCCEEEEEEEe
Confidence 35799999999999999999888 211 12232 233322 23556777777655432 111
Q ss_pred cCC---CCceEEeCcchhhhcC
Q 045784 69 LPF---EGYDVVLDTQWLSTFG 87 (90)
Q Consensus 69 ~~~---~~~dvILG~~wL~~~~ 87 (90)
.+. .+.-.|||..||+.+-
T Consensus 333 ~~~~~~~~~~~ILG~~Fl~~~y 354 (370)
T 3psg_A 333 MDVPTSSGELWILGDVFIRQYY 354 (370)
T ss_dssp ECCCTTSCCEEEECHHHHTTEE
T ss_pred CCCCCCCCCcEEeChHHhcceE
Confidence 111 1224899999999864
No 47
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=91.65 E-value=1.8 Score=29.51 Aligned_cols=27 Identities=11% Similarity=0.049 Sum_probs=22.7
Q ss_pred EEEEEEEC--CEEEEEEEcCCCCcccccH
Q 045784 2 IRVIGRLV--HKVVTVLIDSRRTHNFVRQ 28 (90)
Q Consensus 2 ~~v~~~i~--~~~~~aLiDsGA~~~~i~~ 28 (90)
..++..|. .++..+++||||+..++..
T Consensus 17 Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~ 45 (329)
T 3c9x_A 17 YITSVSIGTPAQVLPLDFDTGSSDLWVFS 45 (329)
T ss_dssp EEEEEEETTTTEEEEEEEETTCCCEEECB
T ss_pred EEEEEEECCCCeEEEEEEcCCCCCeEEec
Confidence 35677788 8999999999999998854
No 48
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=91.65 E-value=1.4 Score=29.90 Aligned_cols=26 Identities=15% Similarity=0.115 Sum_probs=21.8
Q ss_pred EEEEEEC--CEEEEEEEcCCCCcccccH
Q 045784 3 RVIGRLV--HKVVTVLIDSRRTHNFVRQ 28 (90)
Q Consensus 3 ~v~~~i~--~~~~~aLiDsGA~~~~i~~ 28 (90)
.++..|. .++..+++||||+..++..
T Consensus 16 ~~~i~iGtP~q~~~v~~DTGSs~lWv~~ 43 (329)
T 1dpj_A 16 YTDITLGTPPQNFKVILDTGSSNLWVPS 43 (329)
T ss_dssp EEEEEETTTTEEEEEEEETTCCCEEEEB
T ss_pred EEEEEECCCCcEEEEEEeCCCcCeEEec
Confidence 4667777 7999999999999998853
No 49
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=91.29 E-value=1.5 Score=30.20 Aligned_cols=26 Identities=12% Similarity=0.166 Sum_probs=22.1
Q ss_pred EEEEEEC--CEEEEEEEcCCCCcccccH
Q 045784 3 RVIGRLV--HKVVTVLIDSRRTHNFVRQ 28 (90)
Q Consensus 3 ~v~~~i~--~~~~~aLiDsGA~~~~i~~ 28 (90)
.++..|. .++..+++||||+..++..
T Consensus 21 ~~~i~iGtP~q~~~v~~DTGSs~~Wv~~ 48 (361)
T 1mpp_A 21 AIPVSIGTPGQDFYLLFDTGSSDTWVPH 48 (361)
T ss_dssp EEEEEETTTTEEEEEEEETTCCCCEEEB
T ss_pred EEEEEECCCCcEEEEEEcCCCCCeEECC
Confidence 4677787 8999999999999998854
No 50
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=91.14 E-value=2.1 Score=29.36 Aligned_cols=77 Identities=13% Similarity=0.171 Sum_probs=46.4
Q ss_pred EEEEEEC--CEEEEEEEcCCCCcccccHH------hhhe--e---------------eEEecCCCeeeeeceeeeeEEEE
Q 045784 3 RVIGRLV--HKVVTVLIDSRRTHNFVRQE------LAVK--L---------------NVMVASGERFSSLGTCLQTLIKL 57 (90)
Q Consensus 3 ~v~~~i~--~~~~~aLiDsGA~~~~i~~~------~a~~--l---------------~v~~a~G~~~~~~~~~~~~~i~i 57 (90)
.++..|. .++..+++||||+..++... |... + .+..++|. ..|....=.+.+
T Consensus 26 ~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs---~~G~~~~D~v~i 102 (351)
T 1tzs_A 26 FGTISIGSPPQNFTVIFDTGSSNLWVPSVYCTSPACKTHSRFQPSQSSTYSQPGQSFSIQYGTGS---LSGIIGADQVSV 102 (351)
T ss_dssp CEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGGTTSCCBCGGGCTTCBCCSCEEEEESSSCE---EEEEEEEEEEEE
T ss_pred EEEEEECCCCeEEEEEEeCCCcceEEecCCCCccccCCCCcCCcccCcceEECCCEEEEEeCCCC---eEEEEEEeEEEE
Confidence 3566776 69999999999999998542 2111 0 34445553 234443335677
Q ss_pred eceeEE-eeEEEcCC--------CCceEEeCcch
Q 045784 58 QGVPLI-VDFYLLPF--------EGYDVVLDTQW 82 (90)
Q Consensus 58 ~~~~~~-~~~~v~~~--------~~~dvILG~~w 82 (90)
++.... ..|-+... ..+|-|||+.+
T Consensus 103 g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~ 136 (351)
T 1tzs_A 103 EGLTVVGQQFGESVTEPGQTFVDAEFDGILGLGY 136 (351)
T ss_dssp TTEEEEEEEEEEECSCCCGGGGGCSCSEEEECSC
T ss_pred CCeEECCeEEEEEEeccccccccCCCceEEecCC
Confidence 776544 34544332 24689999875
No 51
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=91.12 E-value=0.36 Score=27.67 Aligned_cols=28 Identities=14% Similarity=0.038 Sum_probs=22.8
Q ss_pred EEEEEEEC--CEEEEEEEcCCCCcccccHH
Q 045784 2 IRVIGRLV--HKVVTVLIDSRRTHNFVRQE 29 (90)
Q Consensus 2 ~~v~~~i~--~~~~~aLiDsGA~~~~i~~~ 29 (90)
..++..|. .++..+++||||+..++...
T Consensus 15 Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~ 44 (97)
T 1lya_A 15 YYGEIGIGTPPQCFTVVFDTGSSNLWVPSI 44 (97)
T ss_dssp EEEEEEETTTTEEEEEEEETTCCCEEEEBT
T ss_pred EEEEEEECCCCeEEEEEEeCCCCceEEeEc
Confidence 34667787 79999999999999987643
No 52
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=91.12 E-value=0.45 Score=32.49 Aligned_cols=77 Identities=9% Similarity=-0.009 Sum_probs=45.8
Q ss_pred EEEEEEEcCCCCcccccHHhhhee--eE---Ee--cCCC-eeeeeceeeeeEEEEeceeEEee---------------EE
Q 045784 11 KVVTVLIDSRRTHNFVRQELAVKL--NV---MV--ASGE-RFSSLGTCLQTLIKLQGVPLIVD---------------FY 67 (90)
Q Consensus 11 ~~~~aLiDsGA~~~~i~~~~a~~l--~v---~~--a~G~-~~~~~~~~~~~~i~i~~~~~~~~---------------~~ 67 (90)
.+..+++|||.+..++.++.++++ .+ .. .+|. .+.|....+.+.+.+++..+..+ +.
T Consensus 212 ~~~~aiiDSGTt~~~lp~~~~~~i~~~i~~a~~~~~~~~~~~~C~~~~P~i~f~f~g~~~~ip~~~~~~~~~~~~~~~C~ 291 (329)
T 3c9x_A 212 NSIDGIADTGTTLLLLDDNVVDAYYANVQSAQYDNQQEGVVFDCDEDLPSFSFGVGSSTITIPGDLLNLTPLEEGSSTCF 291 (329)
T ss_dssp CCEEEEECTTCCSEEECHHHHHHHHTTCTTCEEETTTTEEEEETTCCCCCEEEEETTEEEEECGGGGEEEESSTTCSEEE
T ss_pred CCceEEEECCCCcEeCCHHHHHHHHHhCCCcEEcCCCCEEEEECCCCCCcEEEEECCEEEEECHHHeeeeccCCCCCeEE
Confidence 356899999999999999998877 21 11 1121 13333334556666666443211 11
Q ss_pred --EcCCC-CceEEeCcchhhhcC
Q 045784 68 --LLPFE-GYDVVLDTQWLSTFG 87 (90)
Q Consensus 68 --v~~~~-~~dvILG~~wL~~~~ 87 (90)
+.+.. ....|||..||+.+.
T Consensus 292 ~~i~~~~~~~~~ILG~~fl~~~y 314 (329)
T 3c9x_A 292 GGLQSSSGIGINIFGDVALKAAL 314 (329)
T ss_dssp ESEEECTTTTSEEECHHHHTTEE
T ss_pred EEEEcCCCCCcEEEChHHhccEE
Confidence 12222 245899999998764
No 53
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=90.97 E-value=0.34 Score=33.12 Aligned_cols=28 Identities=25% Similarity=0.275 Sum_probs=23.2
Q ss_pred EECCEE----EEEEEcCCCCcccccHHhhhee
Q 045784 7 RLVHKV----VTVLIDSRRTHNFVRQELAVKL 34 (90)
Q Consensus 7 ~i~~~~----~~aLiDsGA~~~~i~~~~a~~l 34 (90)
.++++. ..+++|||++..++.++.++++
T Consensus 203 ~v~g~~~~~~~~~iiDSGTt~~~lP~~~~~~l 234 (334)
T 1j71_A 203 NFDGTSVSTNADVVLDSGTTITYFSQSTADKF 234 (334)
T ss_dssp EETTEEEEEEEEEEECTTCSSEEECHHHHHHH
T ss_pred EECCEeccCCccEEEeCCCCcEecCHHHHHHH
Confidence 456644 4689999999999999999888
No 54
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=90.95 E-value=1.2 Score=29.98 Aligned_cols=77 Identities=12% Similarity=0.034 Sum_probs=46.5
Q ss_pred EEEEEEC--CEEEEEEEcCCCCcccccHHhhh------ee-----------------eEEecCCCeeeeeceeeeeEEEE
Q 045784 3 RVIGRLV--HKVVTVLIDSRRTHNFVRQELAV------KL-----------------NVMVASGERFSSLGTCLQTLIKL 57 (90)
Q Consensus 3 ~v~~~i~--~~~~~aLiDsGA~~~~i~~~~a~------~l-----------------~v~~a~G~~~~~~~~~~~~~i~i 57 (90)
.++..|. .++..+++||||+..++..+-.. .- .+..++|. ..|....=.+.+
T Consensus 14 ~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~C~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~gs---~~G~~~~D~v~i 90 (320)
T 4aa9_A 14 FGKIYIGTPPQEFTVVFDTGSSDLWVPSIYCKSNVCKNHHRFDPRKSSTFRNLGKPLSIHYGTGS---MEGFLGYDTVTV 90 (320)
T ss_dssp EEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTSCCBCGGGCTTCEEEEEEEEEEETTEE---EEEEEEEEEEEE
T ss_pred EEEEEECCCCeEEEEEEeCCCCceEEcCCCCCccccCCCCCCCCCCCcCeEcCCcEEEEEECCcE---EEEEEEEEEEEE
Confidence 4667777 69999999999999998642111 11 33445554 234443335677
Q ss_pred eceeEE-eeEEEcCC--------CCceEEeCcch
Q 045784 58 QGVPLI-VDFYLLPF--------EGYDVVLDTQW 82 (90)
Q Consensus 58 ~~~~~~-~~~~v~~~--------~~~dvILG~~w 82 (90)
++.... ..|-+... ..+|-|||+.+
T Consensus 91 g~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~ 124 (320)
T 4aa9_A 91 SNIVDPNQTVGLSTEQPGEVFTYSEFDGILGLAY 124 (320)
T ss_dssp TTEEEEEEEEEEEEECCSHHHHSCCCSEEEECSC
T ss_pred CCEeecCeEEEEEEEcccccccccCcccEEecCc
Confidence 776554 34443321 23689999875
No 55
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=90.65 E-value=1.1 Score=30.43 Aligned_cols=28 Identities=25% Similarity=0.325 Sum_probs=23.2
Q ss_pred EECCEE----EEEEEcCCCCcccccHHhhhee
Q 045784 7 RLVHKV----VTVLIDSRRTHNFVRQELAVKL 34 (90)
Q Consensus 7 ~i~~~~----~~aLiDsGA~~~~i~~~~a~~l 34 (90)
.++++. ..+++|||.+..++.++.++++
T Consensus 205 ~v~g~~~~~~~~~iiDSGtt~~~lP~~~~~~i 236 (339)
T 3fv3_A 205 NLKGSSFSFGDGALLDSGTTLTYFPSDFAAQL 236 (339)
T ss_dssp EESSCEEEEEEEEEECTTBSSEEECHHHHHHH
T ss_pred EECCEeecCCccEEEeCCCCCEecCHHHHHHH
Confidence 355544 4599999999999999999988
No 56
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=90.50 E-value=2.8 Score=28.42 Aligned_cols=78 Identities=14% Similarity=0.128 Sum_probs=46.8
Q ss_pred EEEEEEEC--CEEEEEEEcCCCCcccccHH------hhhe--e---------------eEEecCCCeeeeeceeeeeEEE
Q 045784 2 IRVIGRLV--HKVVTVLIDSRRTHNFVRQE------LAVK--L---------------NVMVASGERFSSLGTCLQTLIK 56 (90)
Q Consensus 2 ~~v~~~i~--~~~~~aLiDsGA~~~~i~~~------~a~~--l---------------~v~~a~G~~~~~~~~~~~~~i~ 56 (90)
..++..|. .++..+++||||+..++... |... . .+...+|.. .|....=.+.
T Consensus 14 Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~gs~---~G~~~~D~v~ 90 (329)
T 1htr_B 14 YFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQSQACTSHSRFNPSESSTYSTNGQTFSLQYGSGSL---TGFFGYDTLT 90 (329)
T ss_dssp EEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTSCCBCGGGCTTCEEEEEEEEEEETTEEE---EEEEEEEEEE
T ss_pred EEEEEEECCCCcEEEEEEcCCCccEEEecCCCCCcccCCCCcCCCccCCCeEECCcEEEEEeCCCCe---EEEEEeeeEE
Confidence 35667777 69999999999999988542 2111 1 233444431 3443333566
Q ss_pred EeceeEE-eeEEEcCC--------CCceEEeCcch
Q 045784 57 LQGVPLI-VDFYLLPF--------EGYDVVLDTQW 82 (90)
Q Consensus 57 i~~~~~~-~~~~v~~~--------~~~dvILG~~w 82 (90)
+++.... ..|-+... ..+|-|||+.+
T Consensus 91 ~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~ 125 (329)
T 1htr_B 91 VQSIQVPNQEFGLSENEPGTNFVYAQFDGIMGLAY 125 (329)
T ss_dssp ETTEEEEEEEEEEESSCSSGGGGGCSCCEEEECCC
T ss_pred EcceEECceEEEEEEEccccccccCCCceEEecCC
Confidence 7776554 34554432 24689999865
No 57
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=89.81 E-value=1.9 Score=30.82 Aligned_cols=27 Identities=15% Similarity=0.130 Sum_probs=22.2
Q ss_pred EEEEEEEC--CEEEEEEEcCCCCcccccH
Q 045784 2 IRVIGRLV--HKVVTVLIDSRRTHNFVRQ 28 (90)
Q Consensus 2 ~~v~~~i~--~~~~~aLiDsGA~~~~i~~ 28 (90)
..++..|. .++..+++||||+..++..
T Consensus 76 Y~~~i~iGTP~Q~~~v~~DTGSs~lWV~~ 104 (455)
T 3lpj_A 76 YYVEMTVGSPPQTLNILVDTGSSNFAVGA 104 (455)
T ss_dssp EEEEEEETTTTEEEEEEEETTCCCEEEEC
T ss_pred EEEEEEECCCCeEEEEEEcCCCcceEEec
Confidence 34667777 6999999999999998854
No 58
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=89.65 E-value=3.4 Score=27.97 Aligned_cols=26 Identities=12% Similarity=0.148 Sum_probs=22.1
Q ss_pred EEEEEEEC--CEEEEEEEcCCCCccccc
Q 045784 2 IRVIGRLV--HKVVTVLIDSRRTHNFVR 27 (90)
Q Consensus 2 ~~v~~~i~--~~~~~aLiDsGA~~~~i~ 27 (90)
..++..|. .++..+++||||+..++.
T Consensus 14 Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~ 41 (342)
T 3pvk_A 14 YAADITVGSNNQKLNVIVDTGSSDLWVP 41 (342)
T ss_dssp EEEEEEETTTTEEEEEEEETTCCCEEEE
T ss_pred EEEEEEEcCCCcEEEEEEECCCcceEEE
Confidence 35677787 799999999999999984
No 59
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=89.54 E-value=3.8 Score=28.29 Aligned_cols=27 Identities=11% Similarity=0.066 Sum_probs=22.4
Q ss_pred EEEEEEEC--CEEEEEEEcCCCCcccccH
Q 045784 2 IRVIGRLV--HKVVTVLIDSRRTHNFVRQ 28 (90)
Q Consensus 2 ~~v~~~i~--~~~~~aLiDsGA~~~~i~~ 28 (90)
..++..|. .++..+++||||+..++..
T Consensus 15 Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~ 43 (383)
T 2ewy_A 15 YYLEMLIGTPPQKLQILVDTGSSNFAVAG 43 (383)
T ss_dssp EEEEEEETTTTEEEEEEEETTCCCEEEEC
T ss_pred EEEEEEecCCCceEEEEEecCCCceEEec
Confidence 35677787 7999999999999998854
No 60
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=88.56 E-value=2.9 Score=29.15 Aligned_cols=27 Identities=15% Similarity=0.130 Sum_probs=22.2
Q ss_pred EEEEEEEC--CEEEEEEEcCCCCcccccH
Q 045784 2 IRVIGRLV--HKVVTVLIDSRRTHNFVRQ 28 (90)
Q Consensus 2 ~~v~~~i~--~~~~~aLiDsGA~~~~i~~ 28 (90)
..++..|. .++..+++||||+..++..
T Consensus 30 Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~ 58 (402)
T 3vf3_A 30 YYVEMTVGSPPQTLNILVDTGSSNFAVGA 58 (402)
T ss_dssp EEEEEEETTTTEEEEEEEETTCCCEEEEC
T ss_pred EEEEEEECCCCeEEEEEEeCCCCceEEcc
Confidence 34567777 7999999999999998853
No 61
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=81.95 E-value=1.6 Score=29.62 Aligned_cols=27 Identities=7% Similarity=-0.028 Sum_probs=22.8
Q ss_pred EEEEEEECCEEEEEEEcCCCCcccccH
Q 045784 2 IRVIGRLVHKVVTVLIDSRRTHNFVRQ 28 (90)
Q Consensus 2 ~~v~~~i~~~~~~aLiDsGA~~~~i~~ 28 (90)
..++..|..++..+++||||+..++..
T Consensus 16 Y~~~i~iG~Q~~~v~~DTGSs~lWv~~ 42 (325)
T 1ibq_A 16 YLTPVTVGKSTLHLDFDTGSADLWVFS 42 (325)
T ss_dssp EEEEEEEBTEEEEEEEETTCCCEEEEC
T ss_pred EEEEEEECCEEEEEEEeCCCccceEee
Confidence 356777889999999999999998864
No 62
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=81.73 E-value=1.1 Score=29.35 Aligned_cols=29 Identities=10% Similarity=0.007 Sum_probs=23.1
Q ss_pred EEECCEE-------EEEEEcCCCCcccccHHhhhee
Q 045784 6 GRLVHKV-------VTVLIDSRRTHNFVRQELAVKL 34 (90)
Q Consensus 6 ~~i~~~~-------~~aLiDsGA~~~~i~~~~a~~l 34 (90)
..+++++ ..++||||.+..++.++.++++
T Consensus 197 i~v~~~~~~~~~~~~~aiiDTGTt~~~lP~~~~~~i 232 (239)
T 1b5f_A 197 VLIGDKSTGFCAPGCQAFADSGTSLLSGPTAIVTQI 232 (239)
T ss_dssp EEETTEECCTTTTCEEEEECTTCSSEEECHHHHHHH
T ss_pred EEECCEEecccCCCCEEEEecCcchhhCCHHHHHHH
Confidence 3466654 4799999999999999988764
No 63
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=81.40 E-value=2.1 Score=27.89 Aligned_cols=26 Identities=15% Similarity=0.005 Sum_probs=21.9
Q ss_pred EEEEEEEC--CEEEEEEEcCCCCccccc
Q 045784 2 IRVIGRLV--HKVVTVLIDSRRTHNFVR 27 (90)
Q Consensus 2 ~~v~~~i~--~~~~~aLiDsGA~~~~i~ 27 (90)
..++..|. .++..+++||||+..++.
T Consensus 15 Y~~~i~iGtP~q~~~v~~DTGSs~lWv~ 42 (239)
T 1b5f_A 15 YFGEIGIGTPPQKFTVIFDTGSSVLWVP 42 (239)
T ss_dssp EEEEEEETTTTEEEEEEEETTCCCEEEE
T ss_pred EEEEEEECCCCeEEEEEEeCCCcceEEE
Confidence 34667787 799999999999999885
No 64
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=81.21 E-value=2.1 Score=29.07 Aligned_cols=27 Identities=7% Similarity=-0.022 Sum_probs=22.8
Q ss_pred EEEEEEEC--CEEEEEEEcCCCCcccccH
Q 045784 2 IRVIGRLV--HKVVTVLIDSRRTHNFVRQ 28 (90)
Q Consensus 2 ~~v~~~i~--~~~~~aLiDsGA~~~~i~~ 28 (90)
..++..|+ .++..+++||||+..++..
T Consensus 17 Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~ 45 (325)
T 2apr_A 17 YYGQVTIGTPGKKFNLDFDTGSSDLWIAS 45 (325)
T ss_dssp EEEEEEETTTTEEEEEEEETTCCCCEEEB
T ss_pred EEEEEEECCCCeEEEEEEcCCCCCEEEcc
Confidence 35677888 8999999999999998864
No 65
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=80.64 E-value=1.9 Score=29.36 Aligned_cols=26 Identities=15% Similarity=0.148 Sum_probs=22.2
Q ss_pred EEEEEECCEEEEEEEcCCCCcccccH
Q 045784 3 RVIGRLVHKVVTVLIDSRRTHNFVRQ 28 (90)
Q Consensus 3 ~v~~~i~~~~~~aLiDsGA~~~~i~~ 28 (90)
.++..|+.++..+++||||+..++..
T Consensus 20 ~~~i~iG~Q~~~v~~DTGSs~lWv~~ 45 (330)
T 1yg9_A 20 AGITKIGNQNFLTVFDSTSCNVVVAS 45 (330)
T ss_dssp EEEEEETTEEEEEEEETTCCCEEEEC
T ss_pred EEEEEECCEEEEEEEeCCCcceEEec
Confidence 46778889999999999999998753
No 66
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=78.51 E-value=2.8 Score=28.52 Aligned_cols=27 Identities=7% Similarity=0.023 Sum_probs=22.6
Q ss_pred EEEEEEEC--CEEEEEEEcCCCCcccccH
Q 045784 2 IRVIGRLV--HKVVTVLIDSRRTHNFVRQ 28 (90)
Q Consensus 2 ~~v~~~i~--~~~~~aLiDsGA~~~~i~~ 28 (90)
..++..|. .++..+++||||+..++..
T Consensus 17 Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~ 45 (329)
T 1oew_A 17 YITPVQIGTPAQTLNLDFDTGSSDLWVFS 45 (329)
T ss_dssp EEEEEEETTTTEEEEEEEETTCCCEEECB
T ss_pred EEEEEEECCCCeEEEEEECCCCCCeEEec
Confidence 35677788 8999999999999998854
No 67
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=78.22 E-value=2.8 Score=28.54 Aligned_cols=26 Identities=8% Similarity=0.149 Sum_probs=22.2
Q ss_pred EEEEEEEC--CEEEEEEEcCCCCccccc
Q 045784 2 IRVIGRLV--HKVVTVLIDSRRTHNFVR 27 (90)
Q Consensus 2 ~~v~~~i~--~~~~~aLiDsGA~~~~i~ 27 (90)
..++..|. .++..+++||||+..++.
T Consensus 14 Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~ 41 (342)
T 2qzx_A 14 YTADITVGSDNQKLNVIVDTGSSDLWIP 41 (342)
T ss_dssp EEEEEEETTTTEEEEEEEETTCCCEEEE
T ss_pred EEEEEEECCCCcEEEEEEeCCCCCeEEe
Confidence 35677787 899999999999999985
No 68
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=77.18 E-value=3.2 Score=28.23 Aligned_cols=26 Identities=19% Similarity=0.093 Sum_probs=22.2
Q ss_pred EEEEEEEC--CEEEEEEEcCCCCccccc
Q 045784 2 IRVIGRLV--HKVVTVLIDSRRTHNFVR 27 (90)
Q Consensus 2 ~~v~~~i~--~~~~~aLiDsGA~~~~i~ 27 (90)
..++..|. .++..+++||||+..++.
T Consensus 14 Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~ 41 (334)
T 1j71_A 14 YAADIVVGSNQQKQTVVIDTGSSDLWVV 41 (334)
T ss_dssp EEEEEEETTTTEEEEEEEETTCCCEEEE
T ss_pred EEEEEEEcCCCcEEEEEEcCCCCCEEEe
Confidence 35677787 899999999999999985
No 69
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=76.56 E-value=3.3 Score=28.84 Aligned_cols=28 Identities=14% Similarity=0.126 Sum_probs=23.0
Q ss_pred EEEEEEEC--CEEEEEEEcCCCCcccccHH
Q 045784 2 IRVIGRLV--HKVVTVLIDSRRTHNFVRQE 29 (90)
Q Consensus 2 ~~v~~~i~--~~~~~aLiDsGA~~~~i~~~ 29 (90)
..++..|. .++..+++||||+..++...
T Consensus 23 Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~ 52 (395)
T 2qp8_A 23 YYVEMTVGSPPQTLNILVDTGSSNFAVGAA 52 (395)
T ss_dssp EEEEEEETTTTEEEEEEEETTCCCEEEECS
T ss_pred EEEEEEecCCCceEEEEEecCCCceEEECC
Confidence 34677787 89999999999999998643
No 70
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=76.40 E-value=3.4 Score=27.98 Aligned_cols=81 Identities=15% Similarity=0.142 Sum_probs=48.6
Q ss_pred EEEEEEEC--CEEEEEEEcCCCCcccccHH---hhhe--------e---------------eEEecCCCeeeeeceeeee
Q 045784 2 IRVIGRLV--HKVVTVLIDSRRTHNFVRQE---LAVK--------L---------------NVMVASGERFSSLGTCLQT 53 (90)
Q Consensus 2 ~~v~~~i~--~~~~~aLiDsGA~~~~i~~~---~a~~--------l---------------~v~~a~G~~~~~~~~~~~~ 53 (90)
..++..|. .++..+++||||+..++... |... + .+...+|... .|....=
T Consensus 14 Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~gs~~--~G~~~~D 91 (339)
T 3fv3_A 14 YASKVSVGSNKQQQTVIIDTGSSDFWVVDSNAQCGKGVDCKSSGTFTPSSSSSYKNLGAAFTIRYGDGSTS--QGTWGKD 91 (339)
T ss_dssp EEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECTTCCTTTTCCBCGGGCTTCEEEEEEEEEECTTSCEE--EEEEEEE
T ss_pred EEEEEEEcCCCcEEEEEEeCCCCceEEecCCCCCCCCCCCCCCCcCCCccCcceeeCCceEEEEECCCceE--EEEEEEE
Confidence 35677787 79999999999999998632 2110 0 3444555332 3333233
Q ss_pred EEEEeceeEE-eeEEEcC-CCCceEEeCcchhh
Q 045784 54 LIKLQGVPLI-VDFYLLP-FEGYDVVLDTQWLS 84 (90)
Q Consensus 54 ~i~i~~~~~~-~~~~v~~-~~~~dvILG~~wL~ 84 (90)
.+.+++.... ..|-+.. ..+.|-|||+.+=.
T Consensus 92 ~v~~g~~~v~~~~fg~~~~~~~~~GilGLg~~~ 124 (339)
T 3fv3_A 92 TVTINGVSITGQQIADVTQTSVDQGILGIGYTS 124 (339)
T ss_dssp EEEETTEEEEEEEEEEEEEESSSSCEEECSCGG
T ss_pred EEEECCEEECceEEEEEEecCCCceeEEecCcc
Confidence 5666766544 3444333 34578888887643
No 71
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=74.70 E-value=2.2 Score=29.93 Aligned_cols=20 Identities=15% Similarity=0.307 Sum_probs=18.8
Q ss_pred EEEcCCCCcccccHHhhhee
Q 045784 15 VLIDSRRTHNFVRQELAVKL 34 (90)
Q Consensus 15 aLiDsGA~~~~i~~~~a~~l 34 (90)
++||||.+..++.++..+++
T Consensus 262 aiiDSGTt~~~lp~~~~~~l 281 (403)
T 3aup_A 262 TMISTSTPHMVLQQSVYQAF 281 (403)
T ss_dssp EEECSSCSSEEECHHHHHHH
T ss_pred EEEECCCccEEeCHHHHHHH
Confidence 99999999999999988877
No 72
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=72.83 E-value=2.1 Score=29.59 Aligned_cols=21 Identities=19% Similarity=0.145 Sum_probs=19.5
Q ss_pred EEEEcCCCCcccccHHhhhee
Q 045784 14 TVLIDSRRTHNFVRQELAVKL 34 (90)
Q Consensus 14 ~aLiDsGA~~~~i~~~~a~~l 34 (90)
.+++|||.+..++.++.++++
T Consensus 222 ~aiiDSGTt~~~lP~~~~~~l 242 (383)
T 2ewy_A 222 KAIVDSGTTLLRLPQKVFDAV 242 (383)
T ss_dssp CEEECTTCSSEEEEHHHHHHH
T ss_pred cEEEEcCCccccCCHHHHHHH
Confidence 599999999999999998887
No 73
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=72.77 E-value=4.8 Score=27.13 Aligned_cols=26 Identities=12% Similarity=0.143 Sum_probs=21.5
Q ss_pred EEEEEEC--CEEEEEEEcCCCCcccccH
Q 045784 3 RVIGRLV--HKVVTVLIDSRRTHNFVRQ 28 (90)
Q Consensus 3 ~v~~~i~--~~~~~aLiDsGA~~~~i~~ 28 (90)
.++..|. .++..+++||||+..++..
T Consensus 15 ~~~i~iGtP~q~~~v~~DTGSs~~Wv~~ 42 (324)
T 1am5_A 15 YGVISIGTPPESFKVIFDTGSSNLWVSS 42 (324)
T ss_dssp EEEEEETTTTEEEEEEEETTCCCEEECB
T ss_pred EEEEEECCCCeEEEEEEeCCCcceEEec
Confidence 4567777 5999999999999998854
No 74
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=72.41 E-value=5.2 Score=27.98 Aligned_cols=28 Identities=25% Similarity=0.117 Sum_probs=22.7
Q ss_pred EEEEEEEC--CEEEEEEEcCCCCcccccHH
Q 045784 2 IRVIGRLV--HKVVTVLIDSRRTHNFVRQE 29 (90)
Q Consensus 2 ~~v~~~i~--~~~~~aLiDsGA~~~~i~~~ 29 (90)
..++..|. .++..+++||||+..++...
T Consensus 23 Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~ 52 (403)
T 3aup_A 23 HWANLQKRTPLMQVPVLVDLNGNHLWVNCE 52 (403)
T ss_dssp EEEEEEETTTTEEEEEEEETTCSSEEEECS
T ss_pred EEEEEECCCCCceeEEEEECCCCceeECCC
Confidence 35667777 79999999999999998643
No 75
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=71.65 E-value=2.2 Score=29.66 Aligned_cols=29 Identities=17% Similarity=0.177 Sum_probs=23.6
Q ss_pred EEECCEEEE----------EEEcCCCCcccccHHhhhee
Q 045784 6 GRLVHKVVT----------VLIDSRRTHNFVRQELAVKL 34 (90)
Q Consensus 6 ~~i~~~~~~----------aLiDsGA~~~~i~~~~a~~l 34 (90)
..++++.+. +++|||.+..++.++..+.+
T Consensus 213 i~vg~~~~~~~~~~~~~~~~iiDTGTtl~~lp~~~~~~l 251 (381)
T 1t6e_X 213 IVVGDTRVPVPEGALATGGVMLSTRLPYVLLRPDVYRPL 251 (381)
T ss_dssp EEETTEECCCCTTCSCTTCEEECSSCSSEEECHHHHHHH
T ss_pred EEEcCEEecCCHHHccCCCEEEECCCccEEeCHHHHHHH
Confidence 457776652 89999999999999988866
No 76
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=69.83 E-value=2.4 Score=29.52 Aligned_cols=29 Identities=10% Similarity=0.054 Sum_probs=24.1
Q ss_pred EEECCEEE----------EEEEcCCCCcccccHHhhhee
Q 045784 6 GRLVHKVV----------TVLIDSRRTHNFVRQELAVKL 34 (90)
Q Consensus 6 ~~i~~~~~----------~aLiDsGA~~~~i~~~~a~~l 34 (90)
..++++.+ .+++|||++..++.++.++++
T Consensus 215 i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~l 253 (395)
T 2qp8_A 215 VEINGQDLKMDCKEYNYDKSIVDSGTTNLRLPKKVFEAA 253 (395)
T ss_dssp EEETTEECCCCGGGGGSSCEEECTTCCSEEEEHHHHHHH
T ss_pred EEECCEEcccCccccCCceEEEEcCCCcEecCHHHHHHH
Confidence 45677653 589999999999999998887
No 77
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=67.29 E-value=2.1 Score=29.15 Aligned_cols=28 Identities=18% Similarity=0.335 Sum_probs=23.4
Q ss_pred EECCEE----EEEEEcCCCCcccccHHhhhee
Q 045784 7 RLVHKV----VTVLIDSRRTHNFVRQELAVKL 34 (90)
Q Consensus 7 ~i~~~~----~~aLiDsGA~~~~i~~~~a~~l 34 (90)
.++++. ..+++|||++..++.++.++++
T Consensus 203 ~v~g~~~~~~~~aiiDSGTt~~~lP~~~~~~l 234 (342)
T 2qzx_A 203 NVRGRNVDANTNVLLDSGTTISYFTRSIVRNI 234 (342)
T ss_dssp EETTEEEEEEEEEEECTTCSSEEECHHHHHHH
T ss_pred EECCEecCCCcCEEEeCCCCCEEcCHHHHHHH
Confidence 456654 4689999999999999999988
No 78
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=66.65 E-value=7.5 Score=28.12 Aligned_cols=26 Identities=15% Similarity=0.033 Sum_probs=22.0
Q ss_pred EEEEEEEC--CEEEEEEEcCCCCccccc
Q 045784 2 IRVIGRLV--HKVVTVLIDSRRTHNFVR 27 (90)
Q Consensus 2 ~~v~~~i~--~~~~~aLiDsGA~~~~i~ 27 (90)
..++..|+ .++..+++||||+..++.
T Consensus 54 Y~~~i~IGTP~Q~~~v~~DTGSs~lWV~ 81 (478)
T 1qdm_A 54 YFGEIGVGTPPQKFTVIFDTGSSNLWVP 81 (478)
T ss_dssp EEEEEEETTTTEEEEEEEETTCCCCEEE
T ss_pred EEEEEEECCCCeEEEEEEcCCCcceEEe
Confidence 35677787 799999999999999885
No 79
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=66.43 E-value=3.5 Score=28.74 Aligned_cols=29 Identities=10% Similarity=0.054 Sum_probs=24.2
Q ss_pred EEECCEEE----------EEEEcCCCCcccccHHhhhee
Q 045784 6 GRLVHKVV----------TVLIDSRRTHNFVRQELAVKL 34 (90)
Q Consensus 6 ~~i~~~~~----------~aLiDsGA~~~~i~~~~a~~l 34 (90)
..++++.+ .+++|||++..++.++.++++
T Consensus 222 i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~i 260 (402)
T 3vf3_A 222 VEINGQDLKMDCKEYNYDKSIVDSGTTNLRLPKKVFEAA 260 (402)
T ss_dssp EEETTEECCCCGGGGGSSCEEECTTCCSEEEEHHHHHHH
T ss_pred EEECCEEecccccccCCCeEEEECCCCcccCCHHHHHHH
Confidence 35676654 599999999999999999888
No 80
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=64.67 E-value=4 Score=29.10 Aligned_cols=29 Identities=10% Similarity=0.054 Sum_probs=24.4
Q ss_pred EEECCEEE----------EEEEcCCCCcccccHHhhhee
Q 045784 6 GRLVHKVV----------TVLIDSRRTHNFVRQELAVKL 34 (90)
Q Consensus 6 ~~i~~~~~----------~aLiDsGA~~~~i~~~~a~~l 34 (90)
..++++.+ .+++|||.+..++.++.++++
T Consensus 268 i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~i 306 (455)
T 3lpj_A 268 VEINGQDLKMDCKEYNYDKSIVDSGTTNLRLPKKVFEAA 306 (455)
T ss_dssp EEETTEECCCCGGGGGSSCEEECTTSSSEEEEHHHHHHH
T ss_pred EEECCEEccccccccCCCeEEEECCCcceeCCHHHHHHH
Confidence 35677654 499999999999999999888
No 81
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=61.86 E-value=6.3 Score=27.86 Aligned_cols=21 Identities=5% Similarity=0.033 Sum_probs=18.6
Q ss_pred EEEEcCCCCcccccHHhhhee
Q 045784 14 TVLIDSRRTHNFVRQELAVKL 34 (90)
Q Consensus 14 ~aLiDsGA~~~~i~~~~a~~l 34 (90)
.++||||.+..++.++..+.+
T Consensus 267 ~aIiDSGTslt~lp~~~y~~l 287 (413)
T 3vla_A 267 GTKISTINPYTVLETSIYKAV 287 (413)
T ss_dssp CEEECSSSSSEEEEHHHHHHH
T ss_pred CEEEECCCCcEEcCHHHHHHH
Confidence 489999999999998887776
No 82
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=55.78 E-value=11 Score=27.33 Aligned_cols=22 Identities=9% Similarity=0.071 Sum_probs=19.9
Q ss_pred EEEEEcCCCCcccccHHhhhee
Q 045784 13 VTVLIDSRRTHNFVRQELAVKL 34 (90)
Q Consensus 13 ~~aLiDsGA~~~~i~~~~a~~l 34 (90)
..+++|||.+..+..++.++++
T Consensus 254 ~~aiiDTGTs~~~lP~~~~~~i 275 (478)
T 1qdm_A 254 CAAIADSGTSLLAGPTAIITEI 275 (478)
T ss_dssp EEEEECSSCCSEEECHHHHHHH
T ss_pred ceEEEcCCCCceeCCHHHHHHH
Confidence 5799999999999999988876
No 83
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=51.80 E-value=19 Score=25.32 Aligned_cols=26 Identities=8% Similarity=-0.080 Sum_probs=20.7
Q ss_pred EEEEEECC--EEEEEEEcCCCCcccccH
Q 045784 3 RVIGRLVH--KVVTVLIDSRRTHNFVRQ 28 (90)
Q Consensus 3 ~v~~~i~~--~~~~aLiDsGA~~~~i~~ 28 (90)
.++..|.. ++..+++|||++..++.-
T Consensus 23 ~~~i~iGTPpq~~~v~~DTGS~~lWv~c 50 (413)
T 3vla_A 23 VTTINQRTPLVSENLVVDLGGRFLWVDC 50 (413)
T ss_dssp EEEEEETTTTEEEEEEEETTCSSEEEEC
T ss_pred EEEEEcCCCCcceEEEEeCCChhhhccc
Confidence 45666665 899999999999888853
No 84
>2a50_A ASFP595, GFP-like non-fluorescent chromoprotein FP595 CHAI; ASCP, fluorescent protein, photochromic prote reversible photoswitch; HET: NRQ; 1.30A {Anemonia sulcata} PDB: 2a52_A* 2a53_A* 2a54_A* 2a56_A* 3cfa_L* 3cff_L* 3cfh_L*
Probab=39.28 E-value=37 Score=18.57 Aligned_cols=14 Identities=7% Similarity=0.095 Sum_probs=11.0
Q ss_pred EEEEEEECCEEEEE
Q 045784 2 IRVIGRLVHKVVTV 15 (90)
Q Consensus 2 ~~v~~~i~~~~~~a 15 (90)
++++|.|||++..+
T Consensus 24 l~meG~VNGh~F~i 37 (73)
T 2a50_A 24 TTIEGTVNGHYFKC 37 (73)
T ss_dssp EEEEEEETTEEEEE
T ss_pred EEEEEEECCEEEEE
Confidence 57889999988743
No 85
>2d10_E Ezrin-radixin-moesin binding phosphoprotein 50; protein-peptide complex, cell adhesion; 2.50A {Mus musculus}
Probab=36.03 E-value=8.7 Score=17.12 Aligned_cols=9 Identities=11% Similarity=0.357 Sum_probs=6.7
Q ss_pred CcchhhhcC
Q 045784 79 DTQWLSTFG 87 (90)
Q Consensus 79 G~~wL~~~~ 87 (90)
-|||.+++.
T Consensus 15 ~MDw~kk~e 23 (28)
T 2d10_E 15 QMDWSKKNE 23 (28)
T ss_pred cccHHHHHH
Confidence 478888764
No 86
>2d11_E Na(+)/H(+) exchange regulatory cofactor NHE-RF2; protein-peptide complex, cell adhesion; 2.81A {Mus musculus}
Probab=35.10 E-value=9.2 Score=17.04 Aligned_cols=9 Identities=11% Similarity=0.309 Sum_probs=6.7
Q ss_pred CcchhhhcC
Q 045784 79 DTQWLSTFG 87 (90)
Q Consensus 79 G~~wL~~~~ 87 (90)
-|||.+++.
T Consensus 15 ~MDw~kk~e 23 (28)
T 2d11_E 15 QMDWNRKRE 23 (28)
T ss_pred cccHHHHHH
Confidence 478888764
No 87
>1o8b_A Ribose 5-phosphate isomerase; RPIA, PSI, protein ST initiative, MCSG, midwest center for structural genomics; HET: ABF; 1.25A {Escherichia coli} SCOP: c.124.1.4 d.58.40.1 PDB: 1lkz_A 1ks2_A* 3enq_A 3env_A* 3enw_A*
Probab=25.11 E-value=27 Score=22.77 Aligned_cols=20 Identities=15% Similarity=0.084 Sum_probs=7.9
Q ss_pred EEEEcCCCCcccccHHhhhe
Q 045784 14 TVLIDSRRTHNFVRQELAVK 33 (90)
Q Consensus 14 ~aLiDsGA~~~~i~~~~a~~ 33 (90)
.+.+|||+|..++-+.++++
T Consensus 23 ~I~LdsGST~~~la~~L~~~ 42 (219)
T 1o8b_A 23 IVGVGTGSTAAHFIDALGTM 42 (219)
T ss_dssp CEEECCSCC-----------
T ss_pred EEEEcChHHHHHHHHHHhcc
Confidence 46799999999999999765
No 88
>2f8m_A Ribose 5-phosphate isomerase; structural genomics, PSI, protein structure initiative, STRU genomics of pathogenic protozoa consortium; 2.09A {Plasmodium falciparum}
Probab=24.22 E-value=30 Score=23.03 Aligned_cols=20 Identities=15% Similarity=0.142 Sum_probs=17.2
Q ss_pred EEEEcCCCCcccccHHhhhe
Q 045784 14 TVLIDSRRTHNFVRQELAVK 33 (90)
Q Consensus 14 ~aLiDsGA~~~~i~~~~a~~ 33 (90)
.+.+|||+|..++-+.++++
T Consensus 30 ~IgLgsGST~~~~~~~L~~~ 49 (244)
T 2f8m_A 30 TIGLGTGSTVFYVLERIDNL 49 (244)
T ss_dssp EEEECCSTTTHHHHHHHHHH
T ss_pred EEEEcChHHHHHHHHHHhhh
Confidence 46799999999999999854
No 89
>1pqh_A Aspartate 1-decarboxylase; pyruvoyl dependent decarboxylase, protein SELF-processing; 1.29A {Escherichia coli} SCOP: b.52.2.1 PDB: 1pqf_A 1pt1_A 1pt0_A 1pyq_A 1ppy_A 1pqe_A 1pyu_B 3tm7_B 1aw8_B 1pyu_A 3tm7_A 1aw8_A
Probab=23.83 E-value=80 Score=19.44 Aligned_cols=39 Identities=23% Similarity=0.366 Sum_probs=26.5
Q ss_pred EEEEECCEEEEEEEcCCCCccc-----ccHHhhhee---------eEEecCCCeeeee
Q 045784 4 VIGRLVHKVVTVLIDSRRTHNF-----VRQELAVKL---------NVMVASGERFSSL 47 (90)
Q Consensus 4 v~~~i~~~~~~aLiDsGA~~~~-----i~~~~a~~l---------~v~~a~G~~~~~~ 47 (90)
+++|+....+ |+|..+| ||+++.+.- -+.+.||.+.++.
T Consensus 23 lksKIHRatV-----T~AdL~Y~GSITID~dLldaAgIl~~EkV~IvNvnNG~RfeTY 75 (143)
T 1pqh_A 23 LQGKLHRVKV-----THADLHYEGTCAIDQDFLDAAGILENEAIDIWNVTNGKRFSTY 75 (143)
T ss_dssp EEEEEEEEEC-----CBCCSSSCCCEEEEHHHHHHHTCCTTCEEEEEETTTCCEEEEE
T ss_pred HHhhhcceEE-----eccccccceeEEECHHHHHHcCCCCCCEEEEEECCCCceEEEE
Confidence 5666666655 8888887 577777766 3445678887663
No 90
>1xtz_A Ribose-5-phosphate isomerase; yeast; 2.10A {Saccharomyces cerevisiae}
Probab=23.54 E-value=32 Score=23.19 Aligned_cols=20 Identities=20% Similarity=0.189 Sum_probs=17.5
Q ss_pred EEEEcCCCCcccccHHhhhe
Q 045784 14 TVLIDSRRTHNFVRQELAVK 33 (90)
Q Consensus 14 ~aLiDsGA~~~~i~~~~a~~ 33 (90)
.+.||||+|..++-+.++++
T Consensus 41 ~IgLgsGST~~~~a~~L~~~ 60 (264)
T 1xtz_A 41 IIGIGSGSTVVYVAERIGQY 60 (264)
T ss_dssp EEEECCCSSTHHHHHHHHHH
T ss_pred EEEEcChHHHHHHHHHHhHh
Confidence 46799999999999999854
No 91
>3j20_B 30S ribosomal protein S2P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=22.17 E-value=39 Score=21.88 Aligned_cols=18 Identities=17% Similarity=0.331 Sum_probs=15.4
Q ss_pred CEEEEEEEcCCCCccccc
Q 045784 10 HKVVTVLIDSRRTHNFVR 27 (90)
Q Consensus 10 ~~~~~aLiDsGA~~~~i~ 27 (90)
|.|+.+|+||-+.-++++
T Consensus 134 ~IP~Ial~DTn~~p~~Vd 151 (202)
T 3j20_B 134 GIPIVALVDTENLLSYVD 151 (202)
T ss_dssp TCCEEEEECTTCCCTTCC
T ss_pred CCCEEEEEcCCCCccccC
Confidence 679999999999888765
No 92
>3l7o_A Ribose-5-phosphate isomerase A; RPIA; 1.70A {Streptococcus mutans}
Probab=21.38 E-value=31 Score=22.67 Aligned_cols=20 Identities=15% Similarity=0.225 Sum_probs=17.7
Q ss_pred EEEEcCCCCcccccHHhhhe
Q 045784 14 TVLIDSRRTHNFVRQELAVK 33 (90)
Q Consensus 14 ~aLiDsGA~~~~i~~~~a~~ 33 (90)
.+-+|||+|..++-+.++++
T Consensus 21 vIgLGsGST~~~~i~~L~~~ 40 (225)
T 3l7o_A 21 IVGLGTGSTAYYFVEEVGRR 40 (225)
T ss_dssp EEEECCSTTHHHHHHHHHHH
T ss_pred EEEECCcHHHHHHHHHHHHh
Confidence 46789999999999999886
No 93
>3u5c_A 40S ribosomal protein S0-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_A 3o30_A 3o2z_A 3u5g_A 3jyv_B* 1s1h_B
Probab=20.43 E-value=44 Score=22.48 Aligned_cols=19 Identities=26% Similarity=0.267 Sum_probs=16.1
Q ss_pred CEEEEEEEcCCCCcccccH
Q 045784 10 HKVVTVLIDSRRTHNFVRQ 28 (90)
Q Consensus 10 ~~~~~aLiDsGA~~~~i~~ 28 (90)
|.|+.+|+||-+.-++|+-
T Consensus 140 ~IP~Ial~DTn~~p~~VD~ 158 (252)
T 3u5c_A 140 NIPVIALTDLDSPSEFVDV 158 (252)
T ss_dssp TCCEEEEECTTCCCTTCSS
T ss_pred CCCEEEEEcCCCCcccCCE
Confidence 6799999999998887764
Done!