Query 045789
Match_columns 206
No_of_seqs 164 out of 1926
Neff 7.7
Searched_HMMs 46136
Date Fri Mar 29 05:32:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045789.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/045789hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG3321 Polyketide synthase mo 100.0 9.6E-43 2.1E-47 339.4 17.7 202 2-203 238-456 (1061)
2 TIGR02813 omega_3_PfaA polyket 100.0 1.6E-40 3.5E-45 341.7 19.0 179 1-179 269-465 (2582)
3 PLN02787 3-oxoacyl-[acyl-carri 100.0 7.3E-38 1.6E-42 287.0 17.7 171 1-176 359-539 (540)
4 PRK07910 3-oxoacyl-(acyl carri 100.0 2.2E-37 4.7E-42 277.2 16.8 169 1-175 240-417 (418)
5 PRK14691 3-oxoacyl-(acyl carri 100.0 2.7E-37 5.9E-42 269.9 16.8 170 1-176 160-340 (342)
6 PRK08722 3-oxoacyl-(acyl carri 100.0 8E-37 1.7E-41 273.3 16.6 170 1-175 232-413 (414)
7 PLN02836 3-oxoacyl-[acyl-carri 100.0 9.4E-37 2E-41 274.5 16.1 172 1-177 253-437 (437)
8 PTZ00050 3-oxoacyl-acyl carrie 100.0 2.9E-36 6.3E-41 270.2 17.0 170 1-175 237-420 (421)
9 PRK06333 3-oxoacyl-(acyl carri 100.0 2.6E-36 5.6E-41 270.4 16.3 170 1-176 242-422 (424)
10 KOG1394 3-oxoacyl-(acyl-carrie 100.0 7.5E-37 1.6E-41 261.0 9.7 171 1-175 255-438 (440)
11 cd00832 CLF Chain-length facto 100.0 8.3E-36 1.8E-40 265.6 15.6 164 1-173 227-399 (399)
12 PRK09116 3-oxoacyl-(acyl carri 100.0 1E-35 2.2E-40 265.5 16.0 166 1-174 231-405 (405)
13 PRK07314 3-oxoacyl-(acyl carri 100.0 1.3E-35 2.8E-40 264.7 15.9 170 1-176 230-410 (411)
14 COG0304 FabB 3-oxoacyl-(acyl-c 100.0 9.1E-36 2E-40 264.7 14.7 170 1-176 230-411 (412)
15 PRK07967 3-oxoacyl-(acyl carri 100.0 3.8E-35 8.3E-40 261.8 17.1 165 1-176 230-404 (406)
16 PRK05952 3-oxoacyl-(acyl carri 100.0 4.9E-35 1.1E-39 259.1 16.0 166 1-175 208-381 (381)
17 PRK08439 3-oxoacyl-(acyl carri 100.0 7.2E-35 1.6E-39 260.1 16.7 165 1-175 230-405 (406)
18 TIGR03150 fabF beta-ketoacyl-a 100.0 8.3E-35 1.8E-39 258.6 16.0 168 1-174 229-407 (407)
19 cd00828 elong_cond_enzymes "el 100.0 9.6E-35 2.1E-39 258.5 15.9 168 1-173 229-407 (407)
20 PRK06501 3-oxoacyl-(acyl carri 100.0 1.7E-34 3.6E-39 259.1 16.8 171 1-177 243-424 (425)
21 cd00834 KAS_I_II Beta-ketoacyl 100.0 3.3E-34 7.1E-39 254.4 16.0 167 1-173 229-406 (406)
22 smart00825 PKS_KS Beta-ketoacy 100.0 8.4E-34 1.8E-38 253.5 17.5 176 1-176 233-424 (424)
23 PRK07103 polyketide beta-ketoa 100.0 2E-33 4.2E-38 251.1 16.5 165 1-175 237-410 (410)
24 cd00833 PKS polyketide synthas 100.0 4E-33 8.6E-38 248.3 16.8 173 1-173 233-421 (421)
25 KOG1202 Animal-type fatty acid 100.0 1.8E-32 3.8E-37 258.8 13.1 172 2-180 234-420 (2376)
26 PRK09185 3-oxoacyl-(acyl carri 100.0 1.1E-31 2.4E-36 238.6 15.8 163 1-176 221-391 (392)
27 PRK06519 3-oxoacyl-(acyl carri 100.0 3.6E-28 7.8E-33 216.3 14.5 150 1-175 241-396 (398)
28 PF02801 Ketoacyl-synt_C: Beta 99.9 6.1E-28 1.3E-32 181.2 6.1 105 24-128 1-119 (119)
29 cd00825 decarbox_cond_enzymes 99.9 6.6E-23 1.4E-27 177.0 16.9 165 1-173 159-332 (332)
30 PRK06147 3-oxoacyl-(acyl carri 99.8 3.6E-21 7.8E-26 168.9 9.9 121 1-123 189-321 (348)
31 cd00327 cond_enzymes Condensin 99.8 3.7E-18 8E-23 142.0 14.7 146 1-173 100-254 (254)
32 cd00751 thiolase Thiolase are 99.6 3.6E-15 7.8E-20 132.5 10.4 135 1-174 244-385 (386)
33 TIGR01930 AcCoA-C-Actrans acet 99.6 1.7E-14 3.7E-19 128.3 10.5 113 1-119 245-364 (386)
34 PRK05656 acetyl-CoA acetyltran 99.6 2.7E-14 5.8E-19 127.3 11.8 107 1-117 250-367 (393)
35 PRK05790 putative acyltransfer 99.5 1.9E-13 4.1E-18 121.8 12.5 138 1-176 250-393 (393)
36 PRK06445 acetyl-CoA acetyltran 99.5 2.4E-13 5.1E-18 121.3 10.6 111 1-117 251-368 (394)
37 PRK06633 acetyl-CoA acetyltran 99.5 7.6E-14 1.7E-18 124.3 7.4 113 1-118 249-367 (392)
38 PLN02644 acetyl-CoA C-acetyltr 99.5 5.7E-13 1.2E-17 118.9 11.5 112 1-118 250-368 (394)
39 PRK13359 beta-ketoadipyl CoA t 99.4 4.5E-13 9.8E-18 119.7 9.8 113 1-118 255-375 (400)
40 PRK09052 acetyl-CoA acetyltran 99.4 4.4E-13 9.5E-18 119.8 9.5 106 1-118 256-374 (399)
41 PRK06064 acetyl-CoA acetyltran 99.4 4.8E-13 1E-17 119.0 9.6 117 1-119 211-354 (389)
42 PRK09051 beta-ketothiolase; Pr 99.4 3.6E-13 7.8E-18 120.1 7.7 112 1-118 251-369 (394)
43 PRK07661 acetyl-CoA acetyltran 99.4 6.4E-13 1.4E-17 118.4 9.0 106 1-118 248-366 (391)
44 TIGR02430 pcaF beta-ketoadipyl 99.4 1.3E-12 2.7E-17 116.8 9.7 113 1-118 255-375 (400)
45 PRK08242 acetyl-CoA acetyltran 99.4 9.7E-13 2.1E-17 117.6 7.7 113 1-118 259-377 (402)
46 PRK07108 acetyl-CoA acetyltran 99.4 1.7E-12 3.7E-17 115.8 7.6 112 1-118 249-367 (392)
47 PRK06954 acetyl-CoA acetyltran 99.3 2.1E-12 4.6E-17 115.4 7.3 112 1-118 254-372 (397)
48 PRK07801 acetyl-CoA acetyltran 99.3 7E-12 1.5E-16 111.4 10.4 112 1-118 239-357 (382)
49 PRK07851 acetyl-CoA acetyltran 99.3 2E-12 4.4E-17 115.8 7.0 112 1-118 262-380 (406)
50 TIGR02445 fadA fatty oxidation 99.3 1.2E-11 2.6E-16 110.1 11.4 112 1-118 239-360 (385)
51 PRK08947 fadA 3-ketoacyl-CoA t 99.3 1.4E-11 3E-16 109.8 11.7 112 1-118 241-362 (387)
52 PRK06205 acetyl-CoA acetyltran 99.3 1.2E-11 2.6E-16 110.7 11.3 113 1-119 257-379 (404)
53 PRK09050 beta-ketoadipyl CoA t 99.3 6.8E-12 1.5E-16 112.2 9.7 113 1-118 256-376 (401)
54 PLN02287 3-ketoacyl-CoA thiola 99.3 3.6E-12 7.8E-17 115.5 7.9 112 1-118 290-408 (452)
55 PRK08131 acetyl-CoA acetyltran 99.3 6.9E-12 1.5E-16 112.2 8.3 112 1-118 255-375 (401)
56 PRK08235 acetyl-CoA acetyltran 99.3 4.8E-12 1.1E-16 112.9 7.2 113 1-118 250-368 (393)
57 PRK07516 acetyl-CoA acetyltran 99.3 1.5E-11 3.3E-16 109.5 9.9 115 1-119 215-356 (389)
58 cd00829 SCP-x_thiolase Thiolas 99.3 1.6E-11 3.6E-16 108.3 9.1 117 1-119 204-347 (375)
59 PRK12578 acetyl-CoA acetyltran 99.3 2.4E-11 5.3E-16 108.0 9.9 115 1-119 209-353 (385)
60 PRK06025 acetyl-CoA acetyltran 99.3 2.3E-11 5.1E-16 108.9 9.2 113 1-118 274-392 (417)
61 PRK07850 acetyl-CoA acetyltran 99.2 6.8E-11 1.5E-15 105.4 8.8 112 1-118 244-362 (387)
62 PRK06158 thiolase; Provisional 99.2 8.9E-11 1.9E-15 104.5 9.0 115 1-118 208-348 (384)
63 PRK06366 acetyl-CoA acetyltran 99.1 8.5E-11 1.8E-15 104.8 7.4 112 1-118 244-362 (388)
64 PRK06504 acetyl-CoA acetyltran 99.1 4.3E-10 9.3E-15 100.3 10.9 112 1-118 247-365 (390)
65 PRK08142 acetyl-CoA acetyltran 99.1 2.3E-10 5.1E-15 101.9 9.2 116 1-118 210-351 (388)
66 PRK06690 acetyl-CoA acetyltran 99.1 1.5E-10 3.3E-15 102.2 7.8 112 1-118 217-335 (361)
67 PRK08963 fadI 3-ketoacyl-CoA t 99.1 2.2E-10 4.7E-15 103.4 7.8 113 1-118 267-403 (428)
68 PRK06289 acetyl-CoA acetyltran 99.1 4.7E-10 1E-14 100.4 9.7 118 1-119 222-372 (403)
69 PRK08256 lipid-transfer protei 99.1 6.9E-10 1.5E-14 98.9 9.9 118 1-119 213-360 (391)
70 PRK08313 acetyl-CoA acetyltran 99.1 7.7E-10 1.7E-14 98.5 9.8 118 1-119 208-352 (386)
71 KOG1390 Acetyl-CoA acetyltrans 99.1 1.3E-10 2.8E-15 99.2 4.0 113 1-118 253-371 (396)
72 PTZ00455 3-ketoacyl-CoA thiola 99.1 8E-10 1.7E-14 99.9 9.4 116 1-118 258-404 (438)
73 PRK08170 acetyl-CoA acetyltran 99.0 4.4E-10 9.6E-15 101.3 7.6 113 1-118 266-401 (426)
74 PRK06059 lipid-transfer protei 99.0 3.3E-09 7.2E-14 94.8 12.6 117 1-118 211-368 (399)
75 PRK06066 acetyl-CoA acetyltran 99.0 2.2E-09 4.8E-14 95.6 9.1 117 1-119 210-354 (385)
76 PRK06157 acetyl-CoA acetyltran 99.0 3.2E-09 6.9E-14 95.0 10.0 118 1-119 216-364 (398)
77 PRK07937 lipid-transfer protei 99.0 4.7E-09 1E-13 92.5 10.7 112 1-119 204-325 (352)
78 TIGR02446 FadI fatty oxidation 99.0 1.8E-09 3.8E-14 97.5 7.8 114 1-118 269-405 (430)
79 PRK09268 acetyl-CoA acetyltran 98.9 5.4E-09 1.2E-13 94.3 8.8 115 1-118 264-403 (427)
80 cd00826 nondecarbox_cond_enzym 98.9 3.5E-09 7.6E-14 94.6 7.5 117 1-118 217-364 (393)
81 PRK06065 acetyl-CoA acetyltran 98.9 1.6E-08 3.4E-13 90.4 10.0 117 1-119 216-360 (392)
82 PRK06365 acetyl-CoA acetyltran 98.8 2E-08 4.3E-13 90.7 9.5 117 1-119 225-391 (430)
83 KOG1389 3-oxoacyl CoA thiolase 98.8 4.7E-09 1E-13 89.6 4.5 107 1-119 279-398 (435)
84 PRK08257 acetyl-CoA acetyltran 98.8 7.1E-08 1.5E-12 88.7 12.0 116 2-118 243-372 (498)
85 PRK07855 lipid-transfer protei 98.7 5.2E-08 1.1E-12 86.9 9.5 113 1-119 215-359 (386)
86 PF02803 Thiolase_C: Thiolase, 98.7 3.7E-08 8.1E-13 74.3 6.0 92 22-119 2-100 (123)
87 KOG1391 Acetyl-CoA acetyltrans 98.6 7E-08 1.5E-12 80.8 5.1 113 1-119 252-371 (396)
88 PRK07515 3-oxoacyl-(acyl carri 98.1 2E-06 4.4E-11 76.1 3.6 63 49-111 273-342 (372)
89 KOG1406 Peroxisomal 3-ketoacyl 97.9 3.1E-06 6.7E-11 71.3 1.4 116 2-118 221-367 (408)
90 KOG1392 Acetyl-CoA acetyltrans 97.7 3.8E-05 8.2E-10 65.5 4.7 139 1-177 302-464 (465)
91 PRK07204 3-oxoacyl-(acyl carri 97.2 0.00025 5.5E-09 61.5 3.4 64 49-112 232-299 (329)
92 TIGR00747 fabH 3-oxoacyl-(acyl 97.2 0.0006 1.3E-08 58.7 5.0 65 49-113 221-289 (318)
93 PRK09352 3-oxoacyl-(acyl carri 97.1 0.00031 6.6E-09 60.5 2.8 65 49-113 221-289 (319)
94 cd00830 KAS_III Ketoacyl-acyl 97.0 0.00035 7.7E-09 60.0 2.2 65 49-113 225-293 (320)
95 COG0183 PaaJ Acetyl-CoA acetyl 97.0 5.9E-05 1.3E-09 67.5 -3.3 109 3-118 248-362 (392)
96 PRK09258 3-oxoacyl-(acyl carri 96.9 0.0018 3.9E-08 56.3 5.8 106 1-112 183-308 (338)
97 PRK12879 3-oxoacyl-(acyl carri 96.8 0.0017 3.8E-08 56.0 4.4 64 49-112 227-294 (325)
98 PRK06840 hypothetical protein; 95.7 0.014 3E-07 50.8 4.4 64 49-112 239-305 (339)
99 PRK06816 3-oxoacyl-(acyl carri 95.5 0.041 8.9E-07 48.9 6.8 63 50-112 275-346 (378)
100 PLN02326 3-oxoacyl-[acyl-carri 95.5 0.013 2.9E-07 52.0 3.6 61 51-112 284-349 (379)
101 PRK04262 hypothetical protein; 95.4 0.029 6.4E-07 49.2 5.4 66 47-112 209-280 (347)
102 COG0332 FabH 3-oxoacyl-[acyl-c 95.1 0.021 4.6E-07 49.9 3.5 66 47-112 223-292 (323)
103 CHL00203 fabH 3-oxoacyl-acyl-c 95.1 0.025 5.4E-07 49.1 3.8 63 50-112 229-295 (326)
104 TIGR00748 HMG_CoA_syn_Arc hydr 94.1 0.17 3.6E-06 44.5 6.9 63 51-113 212-280 (345)
105 cd00827 init_cond_enzymes "ini 93.9 0.049 1.1E-06 46.7 3.0 65 47-112 223-296 (324)
106 PRK05963 3-oxoacyl-(acyl carri 93.0 0.14 3E-06 44.2 4.3 61 49-109 229-293 (326)
107 PF08541 ACP_syn_III_C: 3-Oxoa 92.4 0.04 8.6E-07 38.6 0.1 84 57-174 1-89 (90)
108 cd00831 CHS_like Chalcone and 92.4 0.066 1.4E-06 47.1 1.5 65 48-112 260-333 (361)
109 TIGR01835 HMG-CoA-S_prok 3-hyd 90.4 0.86 1.9E-05 40.6 6.5 66 48-113 206-287 (379)
110 COG3425 PksG 3-hydroxy-3-methy 88.9 2.4 5.2E-05 37.9 8.1 107 2-115 156-284 (377)
111 PLN03173 chalcone synthase; Pr 87.9 0.41 8.9E-06 43.0 2.7 66 47-112 277-349 (391)
112 PLN03170 chalcone synthase; Pr 87.9 0.45 9.7E-06 42.8 2.9 66 47-112 281-353 (401)
113 PLN03169 chalcone synthase fam 87.0 0.76 1.7E-05 41.1 3.9 65 47-111 281-354 (391)
114 PRK08256 lipid-transfer protei 86.4 2.3 5E-05 37.9 6.6 95 26-121 4-99 (391)
115 PRK06158 thiolase; Provisional 86.4 2.9 6.4E-05 37.2 7.3 93 25-120 10-103 (384)
116 PRK05790 putative acyltransfer 86.1 2.5 5.3E-05 37.7 6.7 95 25-120 4-106 (393)
117 PRK06365 acetyl-CoA acetyltran 85.3 2.7 6E-05 38.1 6.6 94 25-120 18-117 (430)
118 PLN03172 chalcone synthase fam 85.3 1.1 2.4E-05 40.2 4.0 65 47-111 277-348 (393)
119 PRK06065 acetyl-CoA acetyltran 84.9 2.7 5.9E-05 37.7 6.3 94 25-120 11-109 (392)
120 COG3424 BcsA Predicted naringe 84.1 5 0.00011 35.0 7.2 69 49-117 80-153 (356)
121 PRK06366 acetyl-CoA acetyltran 84.1 2.3 5.1E-05 38.0 5.5 96 25-121 4-107 (388)
122 PRK08142 acetyl-CoA acetyltran 83.9 4.2 9.2E-05 36.4 7.1 93 25-120 7-100 (388)
123 PRK06059 lipid-transfer protei 83.7 2.4 5.2E-05 37.9 5.5 92 25-120 6-103 (399)
124 TIGR02446 FadI fatty oxidation 83.5 3.2 6.9E-05 37.7 6.2 101 18-120 4-111 (430)
125 PRK08170 acetyl-CoA acetyltran 82.5 3.7 8E-05 37.2 6.2 95 25-121 5-108 (426)
126 PLN03171 chalcone synthase-lik 82.4 1.5 3.2E-05 39.5 3.5 64 47-111 279-358 (399)
127 PRK08313 acetyl-CoA acetyltran 79.6 5 0.00011 35.8 5.9 93 26-120 6-104 (386)
128 PRK07801 acetyl-CoA acetyltran 79.6 7.4 0.00016 34.6 7.0 94 26-120 5-107 (382)
129 PRK06157 acetyl-CoA acetyltran 79.3 4.7 0.0001 36.1 5.7 91 25-120 9-106 (398)
130 PRK07855 lipid-transfer protei 79.2 8.2 0.00018 34.5 7.2 90 25-119 6-98 (386)
131 PRK12578 acetyl-CoA acetyltran 78.9 4.6 9.9E-05 35.9 5.5 92 26-120 4-100 (385)
132 PLN02644 acetyl-CoA C-acetyltr 78.9 8.1 0.00018 34.6 7.1 94 25-120 3-105 (394)
133 PRK07937 lipid-transfer protei 78.8 7.8 0.00017 34.3 6.9 92 26-120 5-101 (352)
134 cd00751 thiolase Thiolase are 78.8 7.9 0.00017 34.4 7.0 75 46-120 23-102 (386)
135 PF00195 Chal_sti_synt_N: Chal 77.6 3.1 6.6E-05 34.6 3.7 69 50-118 105-178 (226)
136 PLN00415 3-ketoacyl-CoA syntha 77.3 3.1 6.8E-05 38.3 4.0 72 47-118 136-212 (466)
137 TIGR02845 spore_V_AD stage V s 76.7 2.1 4.5E-05 37.6 2.5 67 2-75 160-230 (327)
138 PRK08257 acetyl-CoA acetyltran 76.4 11 0.00024 35.0 7.4 95 26-120 7-107 (498)
139 PRK06954 acetyl-CoA acetyltran 76.4 9.3 0.0002 34.3 6.7 95 25-120 9-111 (397)
140 PRK07851 acetyl-CoA acetyltran 75.3 7.3 0.00016 35.1 5.8 94 26-120 5-108 (406)
141 PLN02192 3-ketoacyl-CoA syntha 75.1 3.5 7.7E-05 38.4 3.8 70 50-119 181-255 (511)
142 COG3424 BcsA Predicted naringe 74.9 2.4 5.2E-05 37.0 2.4 84 1-86 188-290 (356)
143 PF00108 Thiolase_N: Thiolase, 74.8 17 0.00037 30.6 7.7 73 47-120 28-106 (264)
144 PRK05656 acetyl-CoA acetyltran 74.7 7 0.00015 35.0 5.5 95 25-120 4-106 (393)
145 PLN02377 3-ketoacyl-CoA syntha 73.9 4.4 9.5E-05 37.7 4.1 70 50-119 177-251 (502)
146 PRK06205 acetyl-CoA acetyltran 73.9 14 0.00031 33.1 7.3 96 25-120 4-106 (404)
147 PRK07850 acetyl-CoA acetyltran 73.9 14 0.00029 33.1 7.1 97 25-121 4-108 (387)
148 PLN02854 3-ketoacyl-CoA syntha 73.1 10 0.00022 35.5 6.2 63 50-112 388-463 (521)
149 cd00327 cond_enzymes Condensin 71.9 9.4 0.0002 31.1 5.3 72 47-120 9-86 (254)
150 PRK09051 beta-ketothiolase; Pr 71.9 13 0.00028 33.4 6.5 96 25-120 5-108 (394)
151 PLN02287 3-ketoacyl-CoA thiola 71.0 15 0.00032 33.8 6.7 95 25-120 48-152 (452)
152 TIGR02714 amido_AtzD_TrzD ring 70.1 5.5 0.00012 35.0 3.5 60 47-106 133-197 (366)
153 PRK06066 acetyl-CoA acetyltran 70.0 24 0.00051 31.7 7.7 89 26-120 7-103 (385)
154 PRK12404 stage V sporulation p 69.8 7.1 0.00015 34.3 4.2 72 47-121 56-128 (334)
155 PRK06633 acetyl-CoA acetyltran 69.6 18 0.00039 32.5 6.9 75 46-120 28-107 (392)
156 PRK08963 fadI 3-ketoacyl-CoA t 69.1 21 0.00046 32.3 7.3 96 25-120 7-109 (428)
157 cd00831 CHS_like Chalcone and 69.0 7.4 0.00016 34.1 4.3 72 47-119 87-164 (361)
158 COG0332 FabH 3-oxoacyl-[acyl-c 68.8 3 6.4E-05 36.6 1.7 27 47-73 54-80 (323)
159 PLN03172 chalcone synthase fam 67.9 6.7 0.00015 35.2 3.8 69 50-119 107-181 (393)
160 PRK08304 stage V sporulation p 67.8 3.4 7.4E-05 36.4 1.8 73 46-121 57-130 (337)
161 PRK08131 acetyl-CoA acetyltran 67.8 23 0.0005 31.9 7.2 97 25-121 4-108 (401)
162 PRK09268 acetyl-CoA acetyltran 67.8 15 0.00032 33.4 6.0 96 25-121 9-112 (427)
163 PRK06445 acetyl-CoA acetyltran 67.6 5.7 0.00012 35.5 3.3 74 46-121 33-114 (394)
164 cd00829 SCP-x_thiolase Thiolas 66.9 15 0.00034 32.1 5.9 74 46-120 17-95 (375)
165 PRK06289 acetyl-CoA acetyltran 66.5 8.4 0.00018 34.5 4.2 48 25-72 5-53 (403)
166 TIGR01930 AcCoA-C-Actrans acet 66.1 8 0.00017 34.4 3.9 72 47-120 23-101 (386)
167 cd00825 decarbox_cond_enzymes 65.8 9.9 0.00022 32.4 4.4 73 47-121 13-115 (332)
168 PLN03173 chalcone synthase; Pr 65.7 7.6 0.00017 34.8 3.7 22 50-71 107-128 (391)
169 cd00830 KAS_III Ketoacyl-acyl 65.5 8.3 0.00018 32.8 3.8 73 46-120 51-129 (320)
170 PRK09258 3-oxoacyl-(acyl carri 65.3 8.6 0.00019 33.2 3.9 27 46-72 62-88 (338)
171 PLN03170 chalcone synthase; Pr 65.3 6.8 0.00015 35.2 3.3 27 50-76 111-138 (401)
172 KOG2708 Predicted metalloprote 65.1 6.5 0.00014 33.1 2.9 24 49-72 53-76 (336)
173 PRK12879 3-oxoacyl-(acyl carri 64.8 9.6 0.00021 32.6 4.1 73 46-119 54-131 (325)
174 TIGR00747 fabH 3-oxoacyl-(acyl 64.6 9.5 0.00021 32.6 4.0 74 46-119 52-129 (318)
175 PF09663 Amido_AtzD_TrzD: Amid 64.6 8.2 0.00018 34.1 3.5 59 47-105 132-195 (365)
176 TIGR02845 spore_V_AD stage V s 64.5 4.3 9.3E-05 35.6 1.8 70 46-120 51-123 (327)
177 CHL00203 fabH 3-oxoacyl-acyl-c 64.4 12 0.00025 32.3 4.5 72 47-120 53-129 (326)
178 PRK06816 3-oxoacyl-(acyl carri 64.3 11 0.00023 33.5 4.3 72 46-119 64-141 (378)
179 PLN02854 3-ketoacyl-CoA syntha 64.2 9.1 0.0002 35.8 4.0 67 50-119 193-267 (521)
180 PLN03168 chalcone synthase; Pr 63.9 5.6 0.00012 35.6 2.5 64 48-111 277-347 (389)
181 PRK08242 acetyl-CoA acetyltran 63.4 22 0.00047 32.1 6.2 73 47-120 30-109 (402)
182 PLN03168 chalcone synthase; Pr 62.2 11 0.00023 33.8 4.0 69 50-118 106-179 (389)
183 PRK09352 3-oxoacyl-(acyl carri 61.2 13 0.00029 31.7 4.3 72 46-119 53-130 (319)
184 cd00827 init_cond_enzymes "ini 59.8 12 0.00026 31.9 3.7 73 46-120 49-127 (324)
185 PRK09585 anmK anhydro-N-acetyl 59.6 8.8 0.00019 34.2 2.9 30 46-75 70-99 (365)
186 PLN02932 3-ketoacyl-CoA syntha 59.4 8.9 0.00019 35.5 3.0 68 49-119 152-227 (478)
187 PRK07516 acetyl-CoA acetyltran 59.2 13 0.00029 33.0 4.1 74 47-120 24-103 (389)
188 PRK07204 3-oxoacyl-(acyl carri 59.0 6.2 0.00013 34.0 1.8 31 46-77 53-83 (329)
189 PF08392 FAE1_CUT1_RppA: FAE1/ 58.5 20 0.00044 30.9 4.9 70 49-118 87-161 (290)
190 PRK06504 acetyl-CoA acetyltran 57.9 36 0.00079 30.5 6.6 96 25-121 4-108 (390)
191 PRK05963 3-oxoacyl-(acyl carri 57.6 6.5 0.00014 33.8 1.8 30 47-77 54-83 (326)
192 PF08545 ACP_syn_III: 3-Oxoacy 56.5 10 0.00022 25.7 2.3 13 1-13 52-64 (80)
193 PRK06064 acetyl-CoA acetyltran 55.9 14 0.00031 32.8 3.7 93 26-121 5-104 (389)
194 PRK08235 acetyl-CoA acetyltran 55.4 17 0.00038 32.5 4.1 95 25-120 4-106 (393)
195 PRK07515 3-oxoacyl-(acyl carri 55.3 17 0.00037 32.0 4.0 69 48-120 98-173 (372)
196 PRK07108 acetyl-CoA acetyltran 55.0 13 0.00029 33.2 3.3 96 26-121 5-109 (392)
197 PF07451 SpoVAD: Stage V sporu 54.7 9.6 0.00021 33.3 2.3 28 45-72 51-78 (329)
198 PRK09050 beta-ketoadipyl CoA t 54.3 51 0.0011 29.6 7.0 96 26-121 5-109 (401)
199 PLN03169 chalcone synthase fam 53.9 16 0.00036 32.6 3.7 24 50-73 111-134 (391)
200 PRK12880 3-oxoacyl-(acyl carri 53.1 8 0.00017 34.1 1.6 27 47-73 62-88 (353)
201 PRK06840 hypothetical protein; 52.7 9.9 0.00021 32.9 2.1 27 46-72 54-80 (339)
202 PLN03171 chalcone synthase-lik 51.5 26 0.00056 31.5 4.6 23 50-72 113-135 (399)
203 cd00826 nondecarbox_cond_enzym 50.9 23 0.00051 31.6 4.2 75 46-120 24-103 (393)
204 TIGR02430 pcaF beta-ketoadipyl 47.7 65 0.0014 29.0 6.6 96 26-121 4-108 (400)
205 PRK08304 stage V sporulation p 46.4 16 0.00035 32.2 2.4 68 2-76 166-237 (337)
206 TIGR00748 HMG_CoA_syn_Arc hydr 46.2 12 0.00026 32.7 1.7 27 46-72 51-77 (345)
207 PRK08947 fadA 3-ketoacyl-CoA t 45.6 84 0.0018 28.0 6.9 95 26-121 5-110 (387)
208 PRK12880 3-oxoacyl-(acyl carri 45.0 12 0.00025 33.0 1.4 61 50-110 245-310 (353)
209 PRK07661 acetyl-CoA acetyltran 45.0 93 0.002 27.8 7.1 96 25-120 4-108 (391)
210 COG0533 QRI7 Metal-dependent p 44.4 21 0.00044 31.6 2.7 32 47-78 52-84 (342)
211 PLN02326 3-oxoacyl-[acyl-carri 43.8 14 0.0003 32.8 1.7 26 47-72 98-123 (379)
212 PF03702 UPF0075: Uncharacteri 43.8 19 0.0004 32.2 2.4 30 46-75 67-96 (364)
213 PRK04262 hypothetical protein; 43.1 15 0.00032 32.1 1.7 27 46-72 52-78 (347)
214 TIGR02445 fadA fatty oxidation 42.6 96 0.0021 27.7 6.8 74 47-120 27-107 (385)
215 PTZ00455 3-ketoacyl-CoA thiola 41.5 38 0.00082 30.9 4.1 74 47-120 50-138 (438)
216 PRK13359 beta-ketoadipyl CoA t 41.3 1.2E+02 0.0026 27.2 7.3 96 25-121 4-109 (400)
217 PRK09052 acetyl-CoA acetyltran 39.5 43 0.00093 30.1 4.1 48 25-72 8-59 (399)
218 PF14804 Jag_N: Jag N-terminus 39.0 17 0.00038 22.9 1.1 23 47-69 5-27 (52)
219 PF15127 DUF4565: Protein of u 38.0 35 0.00077 24.2 2.6 25 50-74 63-90 (91)
220 PF01890 CbiG_C: Cobalamin syn 38.0 67 0.0015 23.8 4.4 38 27-72 3-40 (121)
221 PLN02377 3-ketoacyl-CoA syntha 37.4 55 0.0012 30.5 4.6 49 63-111 391-446 (502)
222 PLN02577 hydroxymethylglutaryl 37.1 72 0.0016 29.4 5.2 30 50-79 218-253 (459)
223 PF09861 DUF2088: Domain of un 35.5 61 0.0013 26.4 4.1 32 47-78 71-102 (204)
224 PRK06025 acetyl-CoA acetyltran 34.4 2.3E+02 0.0049 25.8 7.9 72 48-121 32-111 (417)
225 PRK12404 stage V sporulation p 34.3 35 0.00077 30.1 2.6 65 4-75 166-234 (334)
226 TIGR01833 HMG-CoA-S_euk 3-hydr 31.1 31 0.00067 31.7 1.8 30 49-79 54-83 (454)
227 PLN02577 hydroxymethylglutaryl 29.8 31 0.00066 31.8 1.6 37 49-87 57-93 (459)
228 KOG2707 Predicted metalloprote 29.1 49 0.0011 29.6 2.6 32 47-78 84-116 (405)
229 PF06277 EutA: Ethanolamine ut 27.5 49 0.0011 30.6 2.5 26 43-68 59-84 (473)
230 COG2971 Predicted N-acetylgluc 27.1 62 0.0013 28.1 2.9 27 45-71 47-73 (301)
231 TIGR00329 gcp_kae1 metallohydr 25.4 40 0.00088 29.0 1.5 36 47-82 50-86 (305)
232 PF00814 Peptidase_M22: Glycop 24.7 63 0.0014 27.3 2.5 32 47-78 31-63 (268)
233 TIGR03722 arch_KAE1 universal 24.2 57 0.0012 28.3 2.2 26 48-73 48-73 (322)
234 KOG0103 Molecular chaperones H 24.0 59 0.0013 31.5 2.3 36 50-85 317-352 (727)
235 PRK14878 UGMP family protein; 24.0 57 0.0012 28.4 2.1 26 48-73 47-72 (323)
236 PTZ00340 O-sialoglycoprotein e 23.9 45 0.00097 29.6 1.5 56 46-101 50-115 (345)
237 PRK13410 molecular chaperone D 23.8 66 0.0014 31.0 2.7 38 47-84 309-346 (668)
238 COG3360 Uncharacterized conser 23.7 42 0.0009 22.6 0.9 29 47-75 17-45 (71)
239 KOG1406 Peroxisomal 3-ketoacyl 23.6 2.4E+02 0.0051 24.5 5.6 65 47-119 31-104 (408)
240 cd02198 YjgH_like YjgH belongs 22.7 47 0.001 23.8 1.2 23 51-73 40-62 (111)
241 PF14518 Haem_oxygenas_2: Iron 22.6 73 0.0016 22.4 2.2 27 47-73 78-104 (106)
242 KOG1390 Acetyl-CoA acetyltrans 22.5 2.9E+02 0.0063 24.6 6.1 72 48-120 33-110 (396)
243 PRK07027 cobalamin biosynthesi 22.1 1E+02 0.0023 22.9 3.0 39 27-73 5-43 (126)
244 PRK06147 3-oxoacyl-(acyl carri 20.9 1.9E+02 0.0041 25.3 4.8 74 50-123 70-154 (348)
245 COG0752 GlyQ Glycyl-tRNA synth 20.9 82 0.0018 26.8 2.3 29 43-71 86-116 (298)
No 1
>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=9.6e-43 Score=339.39 Aligned_cols=202 Identities=28% Similarity=0.377 Sum_probs=180.9
Q ss_pred CceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcCC
Q 045789 2 GEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGD 81 (206)
Q Consensus 2 gEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D 81 (206)
|||++++|||++++|.++|++||++|+|.++|+||.+.+.+.|++.+|.+++++||+++||+|++|+|||+|||||++||
T Consensus 238 geG~g~vvLKrl~~A~~dgd~IyavI~gsavn~dG~~~gltaP~~~aQ~~v~~~al~~a~i~p~tv~yvEaHgTGT~lGD 317 (1061)
T COG3321 238 GEGAGVVVLKRLSDAERDGDRIYAVIRGSAVNQDGRSNGLTAPNLEAQADVIREALADAGIDPATVQYVEAHGTGTPLGD 317 (1061)
T ss_pred eeeEEEEEEEEhHHHHhCCCeEEEEEEeeeeccCCCcCCCCCCCHHHHHHHHHHHHHhcCCCcccCcEEEecCCCCCCcC
Confidence 79999999999999999999999999999999999877999999999999999999999999999999999999999999
Q ss_pred Hhhhhc-------------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCcccccccc
Q 045789 82 LREYQA-------------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFISI 148 (206)
Q Consensus 82 ~~E~~a-------------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (206)
++|..+ |.+||+|+||||++.|+|+++++|++|+|+++++||++|+++|||.+++..++|+++++.+
T Consensus 318 piE~~aL~~v~~~~~~~~~c~iGSvKsNiGH~~~AaGiagliK~~Lal~~~~ip~~l~~~~~np~i~~~~sp~~v~~~~~ 397 (1061)
T COG3321 318 PIEANALGAVYGEGAPAQPCAIGSVKSNIGHLEAAAGIAGLIKTALALKHGYIPPTLHFDTPNPEIDFDSSPFVVPTEAT 397 (1061)
T ss_pred HHHHHHHHHHhccCCCCCcccccccccccccHHHHHHHHHHHHHHHhhhcCccCCcCCCCCCCcCCccccCCeEeecCCc
Confidence 999998 7789999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCC-CCeEEEEEee-cccceeEEEccccCC--CCCCCCCCCCCCCccChHHHHHHHh
Q 045789 149 PVIKQ-FKTRFVLISF-NGSFLSSLYMASCFR--ARPCFRAPSVAVFEETHEAHIAIKL 203 (206)
Q Consensus 149 ~~~~~-~~~~~~~~~~-~gG~n~~~vl~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (206)
+|+.. .+++..+++| +||+|+|+|++++++ .......|...+.+.+..+.+....
T Consensus 398 ~W~~~~~prrAgvssfG~gGtNaHvIlEe~~~~~~~~~~~~p~~l~lSAk~~~~L~~~a 456 (1061)
T COG3321 398 PWPTGGGPRRAGVSSFGFGGTNAHVILEEAPPRAESTIPSSPRLLVLSAKTAERLAATA 456 (1061)
T ss_pred CCCCCCCCceeeeeccCCCCCceEEEEeecCCcccCCCCCCCceeeeecCCHHHHHHHH
Confidence 99887 6777778776 999999999999886 1112222223344555555555443
No 2
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=100.00 E-value=1.6e-40 Score=341.68 Aligned_cols=179 Identities=25% Similarity=0.373 Sum_probs=166.9
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG 80 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~ 80 (206)
+|||++++||||+++|++||++|||+|+|+++++||+....+.|++.++.++|++||++|||+|+||+|||+|||||+.|
T Consensus 269 ~GEGag~vvLkrL~dA~~dGd~IyAvI~G~g~~~DG~~~~itaP~~~gq~~~i~~Al~~Agi~p~~I~yIeaHGTGT~~g 348 (2582)
T TIGR02813 269 IGEGIGMMALKRLEDAERDGDRIYAVIKGVGASSDGKFKSIYAPRPEGQAKALKRAYDDAGFAPHTCGLIEAHGTGTAAG 348 (2582)
T ss_pred ccceEEEEEeCcHHHHHhCCCcEEEEEEEEEEcCCCCCCCCcCCCHHHHHHHHHHHHHHcCCCHHHCCEEEecCCCCCCC
Confidence 59999999999999999999999999999999999997778899999999999999999999999999999999999999
Q ss_pred CHhhhhc--------------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCcccccc
Q 045789 81 DLREYQA--------------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFI 146 (206)
Q Consensus 81 D~~E~~a--------------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~ 146 (206)
|++|..| ++|+|+|++|||+++|||+++++|++++|++++|||++|+++|||.++++..+|+++++
T Consensus 349 D~~E~~Al~~vf~~~~~~~~~~~vgSvKs~iGH~~~AAG~a~lik~~lal~~~~iPp~~~~~~pnp~~~~~~~~~~v~~~ 428 (2582)
T TIGR02813 349 DVAEFGGLVSVFSQDNDQKQHIALGSVKSQIGHTKSTAGTAGMIKAVLALHHKVLPPTINVDQPNPKLDIENSPFYLNTE 428 (2582)
T ss_pred CHHHHHHHHHHhcccccCCCCceeeccccccccchHhHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCccccceeecCC
Confidence 9999888 67999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccC---CCCeEEEEEee-cccceeEEEccccCCC
Q 045789 147 SIPVIK---QFKTRFVLISF-NGSFLSSLYMASCFRA 179 (206)
Q Consensus 147 ~~~~~~---~~~~~~~~~~~-~gG~n~~~vl~~~~~~ 179 (206)
.++|+. ...+++.+|+| |||+|+|+||+++++.
T Consensus 429 ~~pw~~~~~~~~r~a~vnsfGfGGtN~hvvlee~~~~ 465 (2582)
T TIGR02813 429 TRPWMQREDGTPRRAGISSFGFGGTNFHMVLEEYSPK 465 (2582)
T ss_pred cccCcccCCCCccEEEEeCccCCCeeEEEEEeecCcc
Confidence 999963 23455566664 9999999999998643
No 3
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II
Probab=100.00 E-value=7.3e-38 Score=287.00 Aligned_cols=171 Identities=64% Similarity=0.972 Sum_probs=153.9
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG 80 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~ 80 (206)
+|||++++|||++++|+++|++||++|+|+++++|+++.+.++|++.++.++|++||+++||+|+||+||++|||||+.+
T Consensus 359 ~GEGAa~lVLE~~e~A~~rGa~IyA~I~G~g~s~Da~~~t~p~p~g~g~~~am~~AL~~AGl~p~dIdyInaHGTGT~~g 438 (540)
T PLN02787 359 MGEGAGVLLLEELEHAKKRGANIYAEFLGGSFTCDAYHMTEPHPEGAGVILCIEKALAQSGVSKEDVNYINAHATSTKAG 438 (540)
T ss_pred cccceEEEEEeeHHHHHHCCCeeEEEEEEEEEecCCCCCCCCCcCHHHHHHHHHHHHHHcCCCHHHCcEEEccCccCCCC
Confidence 59999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHhhhhc----------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCcccccccccc
Q 045789 81 DLREYQA----------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFISIPV 150 (206)
Q Consensus 81 D~~E~~a----------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (206)
|..|..| ++|+++|+++||+++|+|++++++++++|++|+|||++|+++|++.++++.... .+..+|
T Consensus 439 D~~E~~Ai~~~Fg~~~~~pV~S~Ks~iGH~~gAAGa~eli~~~lal~~g~iPPt~n~~~pd~~~~~~~~v~---~~~~~~ 515 (540)
T PLN02787 439 DLKEYQALMRCFGQNPELRVNSTKSMIGHLLGAAGAVEAIATVQAIRTGWVHPNINLENPESGVDTKVLVG---PKKERL 515 (540)
T ss_pred CHHHHHHHHHHhCCCCCceeeCCCCCcCCCcccchHHHHHHHHHHHhcCCcCCCCCCCCCCccCCcccccc---cccccC
Confidence 9999987 689999999999999999999999999999999999999999999887654221 111222
Q ss_pred cCCCCeEEEEEeecccceeEEEcccc
Q 045789 151 IKQFKTRFVLISFNGSFLSSLYMASC 176 (206)
Q Consensus 151 ~~~~~~~~~~~~~~gG~n~~~vl~~~ 176 (206)
+.+..+.++++|||+|+++|++..
T Consensus 516 --~ir~aL~nSfGFGG~Naslvl~~~ 539 (540)
T PLN02787 516 --DIKVALSNSFGFGGHNSSILFAPY 539 (540)
T ss_pred --CcCEEEEeeecCCceeEEEEEEeC
Confidence 345666666779999999999864
No 4
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=100.00 E-value=2.2e-37 Score=277.20 Aligned_cols=169 Identities=34% Similarity=0.523 Sum_probs=155.5
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG 80 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~ 80 (206)
+|||++++|||++++|+++|++||++|+|+++++|+.+.+.++|++..+.++|++||+++|++|+||+|||+|||||+.+
T Consensus 240 ~gEGaa~vvLe~~~~A~~rg~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~a~~~Al~~agi~~~did~ie~hgtgt~~~ 319 (418)
T PRK07910 240 FGEGGALMVIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERAGHAMTRAIELAGLTPGDIDHVNAHATGTSVG 319 (418)
T ss_pred eeceEEEEEEeeHHHHHhCCCcEEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHhCCCHHHCCEEEcCCcCCCCC
Confidence 58999999999999999999999999999999999999888999999999999999999999999999999999999999
Q ss_pred CHhhhhc---------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCccccccccccc
Q 045789 81 DLREYQA---------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFISIPVI 151 (206)
Q Consensus 81 D~~E~~a---------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (206)
|..|..| .++++.|+++||+++|||++++++++++|++++|||+.|+++++|.++++.++. .+|+
T Consensus 320 D~~E~~Al~~~fg~~~~~v~s~K~~~GH~~~AaG~~~li~~~l~l~~~~ipp~~n~~~~~p~~~l~~~~~------~~~~ 393 (418)
T PRK07910 320 DVAEGKAINNALGGHRPAVYAPKSALGHSVGAVGAVESILTVLALRDGVIPPTLNLENLDPEIDLDVVAG------EPRP 393 (418)
T ss_pred CHHHHHHHHHHhCCCCCceeCccccccccHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcccCCC------CCcC
Confidence 9999988 568999999999999999999999999999999999999999999998776542 4555
Q ss_pred CCCCeEEEEEeecccceeEEEccc
Q 045789 152 KQFKTRFVLISFNGSFLSSLYMAS 175 (206)
Q Consensus 152 ~~~~~~~~~~~~~gG~n~~~vl~~ 175 (206)
...++.+.++++|||+|+|+|++.
T Consensus 394 ~~~~~al~nsfGfGG~N~slvl~~ 417 (418)
T PRK07910 394 GNYRYAINNSFGFGGHNVALAFGR 417 (418)
T ss_pred CCccEEEEeeecCCCeeEEEEEec
Confidence 555666666677999999999985
No 5
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional
Probab=100.00 E-value=2.7e-37 Score=269.90 Aligned_cols=170 Identities=38% Similarity=0.513 Sum_probs=152.6
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG 80 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~ 80 (206)
+|||++++|||++++|+++|+++|++|+|++.++|+.+.+.+.|++.++.++|+++|+++||+++||+|||+|||||+.+
T Consensus 160 ~gEGAa~lvLes~~~A~~rG~~i~a~I~g~~~~~d~~~~~~p~p~~~~~~~ai~~AL~~Agl~p~dIdyIeaHgtgT~~~ 239 (342)
T PRK14691 160 MGEGAGLLIIEELEHALARGAKPLAEIVGYGTSADAYHMTSGAEDGDGAYRAMKIALRQAGITPEQVQHLNAHATSTPVG 239 (342)
T ss_pred ccceEEEEEEeeHHHHHhCCCCceEEEEEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEecCCCCcCC
Confidence 58999999999999999999999999999999999988877889999999999999999999999999999999999999
Q ss_pred CHhhhhc----------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCC-CCCCCccccccccc
Q 045789 81 DLREYQA----------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVL-SRTSGASAAFISIP 149 (206)
Q Consensus 81 D~~E~~a----------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~-~~~~~~~~~~~~~~ 149 (206)
|..|..| ++|+|.|+++||+++|||++++++++++|++++|||++|+++|+|.++ ++.++. + +
T Consensus 240 D~~E~~Ai~~~fg~~~~~~v~s~K~~~GH~~~AaG~~~~~~~~l~l~~~~ippt~n~~~~d~~~~~~~~v~~----~--~ 313 (342)
T PRK14691 240 DLGEINAIKHLFGESNALAITSTKSATGHLLGAAGGLETIFTVLALRDQIVPATLNLENPDPAAKGLNIIAG----N--A 313 (342)
T ss_pred CHHHHHHHHHHhCCCCCceEECCcccccCCcchhhHHHHHHHHHHHhCCccCCcCCCCCCCccccccCcccC----C--C
Confidence 9999877 689999999999999999999999999999999999999999999873 444332 2 2
Q ss_pred ccCCCCeEEEEEeecccceeEEEcccc
Q 045789 150 VIKQFKTRFVLISFNGSFLSSLYMASC 176 (206)
Q Consensus 150 ~~~~~~~~~~~~~~~gG~n~~~vl~~~ 176 (206)
++.+.++.+.++++|||+|+|+|++..
T Consensus 314 ~~~~~~~al~nsfgfGG~n~~lvl~~~ 340 (342)
T PRK14691 314 QPHDMTYALSNGFGFAGVNASILLKRW 340 (342)
T ss_pred ccCCCCEEEEeCccCCCeeEEEEEeec
Confidence 233455666666679999999999874
No 6
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=100.00 E-value=8e-37 Score=273.28 Aligned_cols=170 Identities=36% Similarity=0.581 Sum_probs=152.1
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG 80 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~ 80 (206)
+|||++++|||++++|+++|+++|++|+|++.++|+.+.+.+++++....++|+++|+++||+|+||+|||+|||||+.+
T Consensus 232 ~gEGaaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~a~~~Al~~agi~~~did~ie~hgtgt~~~ 311 (414)
T PRK08722 232 LGDGAGMMVLEEYEHAKARGAKIYAELVGFGMSGDAYHMTSPSEDGSGGALAMEAAMRDAGVTGEQIGYVNAHGTSTPAG 311 (414)
T ss_pred eeceEEEEEEccHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCcchHHHHHHHHHHHHHcCCCHHHcCEEEccCccCCCC
Confidence 58999999999999999999999999999999999988888888888899999999999999999999999999999999
Q ss_pred CHhhhhc------------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCcccccccc
Q 045789 81 DLREYQA------------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFISI 148 (206)
Q Consensus 81 D~~E~~a------------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (206)
|..|..| ++|+++|+++||+++|||++++++++++|++++|||++|+++|+|.++++.++. +..
T Consensus 312 D~~E~~al~~~fg~~~~~~~~v~s~K~~~GH~~~AaG~~~~~~~~l~l~~~~ipp~~n~~~~~~~~~~~~v~~----~~~ 387 (414)
T PRK08722 312 DVAEIKGIKRALGEAGSKQVLVSSTKSMTGHLLGAAGSVEAIITVMSLVDQIVPPTINLDDPEEGLDIDLVPH----TAR 387 (414)
T ss_pred CHHHHHHHHHHhcccCCCCceeeCcccccccchHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcccCCC----ccc
Confidence 9999876 689999999999999999999999999999999999999999999988766542 222
Q ss_pred cccCCCCeEEEEEeecccceeEEEccc
Q 045789 149 PVIKQFKTRFVLISFNGSFLSSLYMAS 175 (206)
Q Consensus 149 ~~~~~~~~~~~~~~~~gG~n~~~vl~~ 175 (206)
+|. ..++.+.++++|||+|+|+||+.
T Consensus 388 ~~~-~~~~~l~nsfGfGG~n~~lvl~~ 413 (414)
T PRK08722 388 KVE-SMEYAICNSFGFGGTNGSLIFKK 413 (414)
T ss_pred cCC-CCCEEEEecccCCCceEEEEEec
Confidence 221 23455555566999999999974
No 7
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase
Probab=100.00 E-value=9.4e-37 Score=274.53 Aligned_cols=172 Identities=45% Similarity=0.601 Sum_probs=154.7
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG 80 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~ 80 (206)
+|||++++||+++++|+++|+++|++|+|++.++|+.+.+.+.+++....++|++||++|||+++||+|||+|||||+.+
T Consensus 253 ~gEGaaalVLe~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p~~~~~~~~~a~~~Al~~Agi~~~dId~ve~hgtgt~~~ 332 (437)
T PLN02836 253 IGEGAGVLVLEELEHAKRRGAKIYAEVRGYGMSGDAHHITQPHEDGRGAVLAMTRALQQSGLHPNQVDYVNAHATSTPLG 332 (437)
T ss_pred eecCEEEEEEeeHHHHHHCCCceEEEEEeeeecCCCCCCcCCCcchHHHHHHHHHHHHHcCCCHhHcCEEEccCCcCcCc
Confidence 58999999999999999999999999999999999988888888888999999999999999999999999999999999
Q ss_pred CHhhhhc-------------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCccccccc
Q 045789 81 DLREYQA-------------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFIS 147 (206)
Q Consensus 81 D~~E~~a-------------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~ 147 (206)
|..|..+ +++++.|+++||+.+|+|++++++++++|++++|||++|+++|+|.++++.++..
T Consensus 333 D~~E~~ai~~~~~~~~~~~~~~v~s~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~n~~~~~p~~~~~~~~~~----- 407 (437)
T PLN02836 333 DAVEARAIKTVFSEHATSGGLAFSSTKGATGHLLGAAGAVEAIFSVLAIHHGIAPPTLNLERPDPIFDDGFVPLT----- 407 (437)
T ss_pred CHHHHHHHHHHhcccccCCCCeeECCcccccccHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcccCccc-----
Confidence 9999887 6789999999999999999999999999999999999999999999987666542
Q ss_pred ccccCCCCeEEEEEeecccceeEEEccccC
Q 045789 148 IPVIKQFKTRFVLISFNGSFLSSLYMASCF 177 (206)
Q Consensus 148 ~~~~~~~~~~~~~~~~~gG~n~~~vl~~~~ 177 (206)
.+.....+..+.++++|||+|+|+|++++|
T Consensus 408 ~~~~~~~~~~l~nsfgfGG~na~lvl~~~~ 437 (437)
T PLN02836 408 ASKAMLIRAALSNSFGFGGTNASLLFTSPP 437 (437)
T ss_pred CCCCCCccEEEEecccCCCeeEEEEEecCC
Confidence 112234455566666799999999999875
No 8
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=100.00 E-value=2.9e-36 Score=270.16 Aligned_cols=170 Identities=44% Similarity=0.633 Sum_probs=153.0
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHH-cCCCccccccccccCCCCCc
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAK-SGVAKEDVNYINAHAPSTRL 79 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~-Agi~~~dI~~ve~hgtgt~~ 79 (206)
+|||++++|||++++|+++|++||++|+|+++++|+.+.+.+.+++.++.++|++||++ |||+++||||||+|||||++
T Consensus 237 ~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~ai~~Al~~~Agi~~~dId~ie~hgtgt~~ 316 (421)
T PTZ00050 237 MGEGAGILVLEELEHALRRGAKIYAEIRGYGSSSDAHHITAPHPDGRGARRCMENALKDGANININDVDYVNAHATSTPI 316 (421)
T ss_pred eccceEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCChHHHHHHHHHHHHhccCCChhhCCEEECCCccCCC
Confidence 48999999999999999999999999999999999998888889999999999999999 99999999999999999999
Q ss_pred CCHhhhhc------------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCccccccc
Q 045789 80 GDLREYQA------------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFIS 147 (206)
Q Consensus 80 ~D~~E~~a------------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~ 147 (206)
+|.+|..+ ++|++.|+++||+++|||++++++++++|++++|||++|+++|++.++++.++. .
T Consensus 317 ~D~~E~~al~~~~~~~~~~~~~v~s~K~~~GH~~~AaG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~l~~~~~-----~ 391 (421)
T PTZ00050 317 GDKIELKAIKKVFGDSGAPKLYVSSTKGGLGHLLGAAGAVESIVTILSLYEQIIPPTINLENPDAECDLNLVQG-----K 391 (421)
T ss_pred CCHHHHHHHHHHhccccCCCceEECccccccccHHHHHHHHHHHHHHHHHcCccCCCCCCCCCCCCCCccccCC-----c
Confidence 99999876 679999999999999999999999999999999999999999999887655543 2
Q ss_pred ccccC-CCCeEEEEEeecccceeEEEccc
Q 045789 148 IPVIK-QFKTRFVLISFNGSFLSSLYMAS 175 (206)
Q Consensus 148 ~~~~~-~~~~~~~~~~~~gG~n~~~vl~~ 175 (206)
.+|+. ..++.+.++++|||+|+|+|++.
T Consensus 392 ~~~~~~~~~~~l~nsfgfgG~n~~lvl~~ 420 (421)
T PTZ00050 392 TAHPLQSIDAVLSTSFGFGGVNTALLFTK 420 (421)
T ss_pred ccCcCCCCCEEEEeeecCCCeeEEEEEeC
Confidence 33432 34556666667999999999985
No 9
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=100.00 E-value=2.6e-36 Score=270.36 Aligned_cols=170 Identities=41% Similarity=0.532 Sum_probs=153.8
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG 80 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~ 80 (206)
+|||++++|||++++|+++|++||++|+|++.++|+.+.+.+.+++..+.++|++||++|||+|+||+|||+|||||+.+
T Consensus 242 ~gEGaa~lvLe~~~~A~~rg~~i~a~i~G~~~~~d~~~~~~~~~~~~~~~~a~~~Al~~Agi~p~dId~i~~hgtgt~~~ 321 (424)
T PRK06333 242 MGEGAGILVIETLEHALARGAPPLAELVGYGTSADAYHMTAGPEDGEGARRAMLIALRQAGIPPEEVQHLNAHATSTPVG 321 (424)
T ss_pred EecceEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHHHCCEEeccCCCCccc
Confidence 48999999999999999999999999999999999988888888899999999999999999999999999999999999
Q ss_pred CHhhhhc----------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCC-CCCCCccccccccc
Q 045789 81 DLREYQA----------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVL-SRTSGASAAFISIP 149 (206)
Q Consensus 81 D~~E~~a----------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~-~~~~~~~~~~~~~~ 149 (206)
|..|..+ +++++.|+++||+.+|||++++++++++|++++|||++|+++|++.++ ++. ++.+.++
T Consensus 322 D~~E~~al~~~fg~~~~~~v~s~K~~~GH~~gAaG~~~~~~~~l~l~~g~ipp~~~~~~~~~~~~~~~~----~~~~~~~ 397 (424)
T PRK06333 322 DLGEVAAIKKVFGHVSGLAVSSTKSATGHLLGAAGGVEAIFTILALRDQIAPPTLNLENPDPAAEGLDV----VANKARP 397 (424)
T ss_pred hHHHHHHHHHHhCCCCCceeECcccchhhhHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCcccccc----ccCCCcc
Confidence 9999977 789999999999999999999999999999999999999999999876 443 3334466
Q ss_pred ccCCCCeEEEEEeecccceeEEEcccc
Q 045789 150 VIKQFKTRFVLISFNGSFLSSLYMASC 176 (206)
Q Consensus 150 ~~~~~~~~~~~~~~~gG~n~~~vl~~~ 176 (206)
|+ .++.+.++.+|||+|+|+||+.+
T Consensus 398 ~~--~~~al~~s~gfGG~n~~~il~~~ 422 (424)
T PRK06333 398 MD--MDYALSNGFGFGGVNASILFRRW 422 (424)
T ss_pred cC--cCEEEEeeecCCCeeEEEEEecc
Confidence 64 34566666679999999999875
No 10
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=7.5e-37 Score=260.96 Aligned_cols=171 Identities=51% Similarity=0.710 Sum_probs=154.9
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG 80 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~ 80 (206)
+|||++++|||++++|++||++||+++.|+++++|.++++.|+|++.+...+|+++|++||+.|+||+||++|+|.|+.|
T Consensus 255 mGEGagvlvlEelEHA~~RgA~I~AE~lGygls~Da~HiT~P~~dG~Ga~~am~raL~~Agl~pe~i~YvNAHATST~~G 334 (440)
T KOG1394|consen 255 MGEGAGVLVLEELEHAKKRGAPIYAEVLGYGLSSDAYHITSPDPDGAGAVLAMERALKDAGLSPEDIDYVNAHATSTPLG 334 (440)
T ss_pred eccceeEEehHhHHHHHHcCCceeHHhhcCcccccccccCCCCCCcchHHHHHHHHHHHcCCChhhcCeeecccccCcCc
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHhhhhc-----------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCccccccccc
Q 045789 81 DLREYQA-----------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFISIP 149 (206)
Q Consensus 81 D~~E~~a-----------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (206)
|..|..| .+|.|.|+.+||..+|+|.++-+-.+++++++++||++|++.|++.++++..++ ...+
T Consensus 335 D~aE~~Ai~~vf~~~~~~~~vsStKgaiGHLLGAAGavEAi~Tv~ai~~~~lpptlNlen~d~~~d~~~~~~----~~~~ 410 (440)
T KOG1394|consen 335 DAAEAEAIKRVFGEHNIASKVSSTKGAIGHLLGAAGAVEAIFTVLAINDGVLPPTLNLENPDPGVDLDYVPL----KASE 410 (440)
T ss_pred hHHHHHHHHHHhccCCcccccccccchhhhhcccccchhhHhhhhhhhcCccCCcccccCCCcccccccccc----cccc
Confidence 9999999 469999999999999999999999999999999999999999999777666554 4455
Q ss_pred ccCC-CCeEEEEEee-cccceeEEEccc
Q 045789 150 VIKQ-FKTRFVLISF-NGSFLSSLYMAS 175 (206)
Q Consensus 150 ~~~~-~~~~~~~~~~-~gG~n~~~vl~~ 175 (206)
|..+ ..+....|+| |||+|+++++..
T Consensus 411 ~~~~~~~~valsNSFGFGGtNaSl~fa~ 438 (440)
T KOG1394|consen 411 KKGGNKVRVALSNSFGFGGTNASLCFAK 438 (440)
T ss_pred ccccccceEEEecccccCCcchhheeee
Confidence 6553 3344455555 999999998764
No 11
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=100.00 E-value=8.3e-36 Score=265.61 Aligned_cols=164 Identities=26% Similarity=0.365 Sum_probs=147.8
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG 80 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~ 80 (206)
+|||++++|||++++|++||++||++|.|+++++|+.+.. +++.++.++|+++|+++|++++||+||++|||||+.+
T Consensus 227 ~gEGa~~lvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~---~~~~~~~~a~~~al~~ag~~~~~i~~v~~hgtgt~~~ 303 (399)
T cd00832 227 PGEGGAILVLEDAAAARERGARVYGEIAGYAATFDPPPGS---GRPPGLARAIRLALADAGLTPEDVDVVFADAAGVPEL 303 (399)
T ss_pred eeceEEEEEEeeHHHHHHCCCeEEEEEEeEEEcCCCCCCC---CCHHHHHHHHHHHHHHcCCCHHHccEEEeccCcCCCC
Confidence 5899999999999999999999999999999999998643 3588999999999999999999999999999999999
Q ss_pred CHhhhhc---------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCccccccccccc
Q 045789 81 DLREYQA---------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFISIPVI 151 (206)
Q Consensus 81 D~~E~~a---------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (206)
|..|..+ ++|++.|+++||+.+|+|++++++++++|++++|||++|+++++|.++++.++. .+++
T Consensus 304 D~~E~~al~~~fg~~~~pv~s~K~~~Gh~~~aaG~~~l~~~~l~l~~~~ipp~~n~~~~~p~~~l~~v~~------~~~~ 377 (399)
T cd00832 304 DRAEAAALAAVFGPRGVPVTAPKTMTGRLYAGGAPLDVATALLALRDGVIPPTVNVTDVPPAYGLDLVTG------RPRP 377 (399)
T ss_pred CHHHHHHHHHHhCCCCCceeCCCchhcchHHHHHHHHHHHHHHHHhCCCcCCCCCCCCCCCCCCcccCCC------cccC
Confidence 9999988 689999999999999999999999999999999999999999999887766543 2334
Q ss_pred CCCCeEEEEEeecccceeEEEc
Q 045789 152 KQFKTRFVLISFNGSFLSSLYM 173 (206)
Q Consensus 152 ~~~~~~~~~~~~~gG~n~~~vl 173 (206)
...++.+.++++|||+|+|+||
T Consensus 378 ~~~~~al~nsfgfGG~na~lvl 399 (399)
T cd00832 378 AALRTALVLARGRGGFNSALVV 399 (399)
T ss_pred CCCCEEEEeccCCCCcceEEEC
Confidence 4456666666779999999986
No 12
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=100.00 E-value=1e-35 Score=265.47 Aligned_cols=166 Identities=40% Similarity=0.549 Sum_probs=148.9
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG 80 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~ 80 (206)
+|||++++|||++++|+++|++||++|+|+++++|+.+. ..|++..+.++|+++|++++++|+||+||++|||||+.+
T Consensus 231 ~gEGa~~~vLe~~~~A~~rga~i~a~i~g~~~~~d~~~~--~~p~~~~~~~ai~~AL~~Agi~p~dId~I~~Hgtgt~~~ 308 (405)
T PRK09116 231 IGEGAGTLVLEELEHAKARGATIYAEIVGFGTNSDGAHV--TQPQAETMQIAMELALKDAGLAPEDIGYVNAHGTATDRG 308 (405)
T ss_pred eeccEEEEEEccHHHHHhCCCceEEEEEEEEEcCCCCcC--CCCCHHHHHHHHHHHHHHhCCCHHHcCEEECcCccCCCC
Confidence 589999999999999999999999999999999998764 455778899999999999999999999999999999999
Q ss_pred CHhhhhc--------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCC-CCCCCCccccccccccc
Q 045789 81 DLREYQA--------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHV-LSRTSGASAAFISIPVI 151 (206)
Q Consensus 81 D~~E~~a--------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 151 (206)
|..|..| +++++.|+++||+.+|+|++++++++++|++++|||++|+++++|++ +++.++. +.. +
T Consensus 309 D~~E~~Ai~~~fg~~~pv~s~K~~~GH~~~AaG~~~~~~~~~~l~~~~ippt~~~~~~~~~~~~l~~v~~----~~~--~ 382 (405)
T PRK09116 309 DIAESQATAAVFGARMPISSLKSYFGHTLGACGALEAWMSIEMMNEGWFAPTLNLTQVDPACGALDYIMG----EAR--E 382 (405)
T ss_pred CHHHHHHHHHHhCCCCeeECcchhhcccHHHHHHHHHHHHHHHHHcCccCCCCCCCCCCCCCcccCccCC----CCc--c
Confidence 9999999 78999999999999999999999999999999999999999999988 4665543 223 3
Q ss_pred CCCCeEEEEEeecccceeEEEcc
Q 045789 152 KQFKTRFVLISFNGSFLSSLYMA 174 (206)
Q Consensus 152 ~~~~~~~~~~~~~gG~n~~~vl~ 174 (206)
.+.++.+.++++|||+|+++|++
T Consensus 383 ~~~~~~l~nsfGfGG~n~~lvl~ 405 (405)
T PRK09116 383 IDTEYVMSNNFAFGGINTSLIFK 405 (405)
T ss_pred CCCCEEEEeeecCCcccEEEEEC
Confidence 34566777777799999999985
No 13
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=100.00 E-value=1.3e-35 Score=264.65 Aligned_cols=170 Identities=45% Similarity=0.641 Sum_probs=153.1
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG 80 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~ 80 (206)
+|||++++||++++.|+++|+++|++|+|++.++|+.+.+.+.+.+..+.++++++|+++|++++||+|||+|||||+.+
T Consensus 230 ~geGAaavvL~~~~~A~~~g~~~~a~I~g~~~~~d~~~~~~~~~~~~~~~~a~~~Al~~agi~~~dId~v~~hgtgt~~~ 309 (411)
T PRK07314 230 MGEGAGILVLEELEHAKARGAKIYAEVVGYGMTGDAYHMTAPAPDGEGAARAMKLALKDAGINPEDIDYINAHGTSTPAG 309 (411)
T ss_pred EEceEEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHHHCCEEEccccCCccc
Confidence 58999999999999999999999999999999999988777888888899999999999999999999999999999999
Q ss_pred CHhhhhc-----------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCccccccccc
Q 045789 81 DLREYQA-----------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFISIP 149 (206)
Q Consensus 81 D~~E~~a-----------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (206)
|..|..+ +++++.|+++||+.+|||++++++++++|++++|||++|+++|++.++++.++. .+
T Consensus 310 d~~E~~al~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~~i~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~------~~ 383 (411)
T PRK07314 310 DKAETQAIKRVFGEHAYKVAVSSTKSMTGHLLGAAGAVEAIFSVLAIRDQVIPPTINLDNPDEECDLDYVPN------EA 383 (411)
T ss_pred cHHHHHHHHHHhcccCCCCeeECccchhchhHHHHHHHHHHHHHHHHhCCCcCCCCCCCCCCCCCCccccCC------cc
Confidence 9999987 789999999999999999999999999999999999999999999887765543 23
Q ss_pred ccCCCCeEEEEEeecccceeEEEcccc
Q 045789 150 VIKQFKTRFVLISFNGSFLSSLYMASC 176 (206)
Q Consensus 150 ~~~~~~~~~~~~~~~gG~n~~~vl~~~ 176 (206)
+....++.++++.+|||+|+|+||+.+
T Consensus 384 ~~~~~~~al~~s~gfGG~n~~~vl~~~ 410 (411)
T PRK07314 384 RERKIDYALSNSFGFGGTNASLVFKRY 410 (411)
T ss_pred cCCCCCEEEEecccCCCceEEEEEecC
Confidence 333445566666679999999999864
No 14
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=9.1e-36 Score=264.73 Aligned_cols=170 Identities=45% Similarity=0.627 Sum_probs=151.7
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG 80 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~ 80 (206)
+|||++++|||++++|++||++||++|.|++.++|+++.+.|.|++.+..++|+.||++||++++||+||++|||+|+.+
T Consensus 230 ~gEGag~lVLE~~ehA~aRGA~Iyaei~G~g~~~Da~h~t~P~p~g~Ga~~am~~AL~~Agl~~~~idYinaHgTsT~~n 309 (412)
T COG0304 230 IGEGAGALVLEELEHALARGAKIYAEIVGYGTTSDAYHITAPAPDGEGAIRAMRAALADAGLTPEDIDYINAHGTSTPAN 309 (412)
T ss_pred EecceeEEEecChhhHHhCCCceEEEEEEEEecccccccCCCCCCCchHHHHHHHHHHHcCCCHhHCCEEeCCCccCCCc
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHhhhhc-----------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCC-CCCCCCCcccccccc
Q 045789 81 DLREYQA-----------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKH-VLSRTSGASAAFISI 148 (206)
Q Consensus 81 D~~E~~a-----------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~-~~~~~~~~~~~~~~~ 148 (206)
|..|..+ ++|.|.|+.+||+.+|+|.++++-++++|+++++||+.|+++++|+ ++++.++. .
T Consensus 310 D~~E~~ai~~vfg~~~~~~~vsstKs~tGH~lGAaGaveai~~~l~l~~g~ippt~n~~~~dp~~~~l~~v~~------~ 383 (412)
T COG0304 310 DKAESLAIKRVFGEHAKSLPVSSTKSLTGHTLGAAGAVEAIISLLALRDGIIPPTINLDNPDPEAADLDVVPN------E 383 (412)
T ss_pred cHHHHHHHHHHhcccccCceeeecccccccChhhHHHHHHHHHHHHHhcCCcCCCCCcCCCCcccccccccCC------c
Confidence 9999999 5689999999999999999999999999999999999999999986 44555553 1
Q ss_pred cccCCCCeEEEEEeecccceeEEEcccc
Q 045789 149 PVIKQFKTRFVLISFNGSFLSSLYMASC 176 (206)
Q Consensus 149 ~~~~~~~~~~~~~~~~gG~n~~~vl~~~ 176 (206)
.........+.++.+|||+|+.+|++.+
T Consensus 384 ~~~~~~~~~lsnsfGFGG~Na~lv~~~~ 411 (412)
T COG0304 384 ARTGAVRAALSNSFGFGGTNASLVFKRY 411 (412)
T ss_pred ccccceeEEEecccccCCcceEEEEecC
Confidence 2222234444444569999999999864
No 15
>PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=100.00 E-value=3.8e-35 Score=261.77 Aligned_cols=165 Identities=36% Similarity=0.537 Sum_probs=143.3
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG 80 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~ 80 (206)
+|||++++|||++++|++||++||++|+|+++++|+.+. +.|++.++.++|++||+.+ ++ |||||++|||||+.+
T Consensus 230 ~gEGaa~lvLe~~~~A~~rga~i~a~i~G~g~~~d~~~~--~~p~~~~~~~a~~~Al~~~--~~-~Idyi~aHgtGT~~~ 304 (406)
T PRK07967 230 IAGGGGVVVVEELEHALARGAKIYAEIVGYGATSDGYDM--VAPSGEGAVRCMQMALATV--DT-PIDYINTHGTSTPVG 304 (406)
T ss_pred eeceEEEEEEeeHHHHHhCCCcEEEEEEEEEECCCCCCC--CCCCHHHHHHHHHHHHhCC--CC-CccEEEcCCCCCCCC
Confidence 599999999999999999999999999999999999875 4568999999999999854 45 999999999999999
Q ss_pred CHhhhhc---------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCC-CCCCCCcccccccccc
Q 045789 81 DLREYQA---------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHV-LSRTSGASAAFISIPV 150 (206)
Q Consensus 81 D~~E~~a---------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 150 (206)
|..|..| ++|+++|+++||+++|||++++++++++|++++|||++|+++++|.+ +++..+ ...++
T Consensus 305 D~~E~~Ai~~~fg~~~~~v~s~K~~~GH~~~AaG~~e~i~~~lal~~~~iPpt~~~~~~~~~~~~~~~~~-----~~~~~ 379 (406)
T PRK07967 305 DVKELGAIREVFGDKSPAISATKSLTGHSLGAAGVQEAIYSLLMMEHGFIAPSANIEELDPQAAGMPIVT-----ETTDN 379 (406)
T ss_pred CHHHHHHHHHHhCCCCCeeECcccccccCccccchHHHHHHHHHHhcCcCCCCCCCCCCCccccCCCccC-----CCCcC
Confidence 9999999 58999999999999999999999999999999999999999999877 343332 21222
Q ss_pred cCCCCeEEEEEeecccceeEEEcccc
Q 045789 151 IKQFKTRFVLISFNGSFLSSLYMASC 176 (206)
Q Consensus 151 ~~~~~~~~~~~~~~gG~n~~~vl~~~ 176 (206)
...++.+.++++|||+|+|+|++++
T Consensus 380 -~~~~~~l~~sfgfGG~n~~lvl~~~ 404 (406)
T PRK07967 380 -AELTTVMSNSFGFGGTNATLVFRRY 404 (406)
T ss_pred -CCCCEEEEecccCCCeeEEEEEEec
Confidence 2344555666679999999999875
No 16
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=100.00 E-value=4.9e-35 Score=259.13 Aligned_cols=166 Identities=36% Similarity=0.596 Sum_probs=149.3
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG 80 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~ 80 (206)
+|||++++|||++++|+++|++||++|+|++.++|+.+.+.+++++..+.++|+++|+++||+|+||+|||+|||||+.+
T Consensus 208 ~gEGaa~lvLe~~~~A~~rg~~i~a~I~g~~~~~d~~~~~~~~~~~~~~~~ai~~Al~~agi~p~dId~i~~hgtgt~~~ 287 (381)
T PRK05952 208 LGEGGAILVLESAELAQKRGAKIYGQILGFGLTCDAYHMSAPEPDGKSAIAAIQQCLARSGLTPEDIDYIHAHGTATRLN 287 (381)
T ss_pred ccccEEEEEEeeHHHHHhCCCceEEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCHHHeeEEEccCCCCCCC
Confidence 59999999999999999999999999999999999998888899999999999999999999999999999999999999
Q ss_pred CHhhhhc--------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCcccccccccccC
Q 045789 81 DLREYQA--------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFISIPVIK 152 (206)
Q Consensus 81 D~~E~~a--------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (206)
|..|..+ ++|++.|+++||+++|+|++++++++++|++++|||+.|+++|++++ +.+. .+.+.
T Consensus 288 D~~E~~al~~~fg~~~~v~s~K~~~GH~~~AaG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~--~~v~-------~~~~~ 358 (381)
T PRK05952 288 DQREANLIQALFPHRVAVSSTKGATGHTLGASGALGVAFSLLALRHQQLPPCVGLQEPEFDL--NFVR-------QAQQS 358 (381)
T ss_pred cHHHHHHHHHHcCCCCeeecchhhhccChHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCC--CcCC-------CcccC
Confidence 9999987 78999999999999999999999999999999999999999876543 3332 22334
Q ss_pred CCCeEEEEEeecccceeEEEccc
Q 045789 153 QFKTRFVLISFNGSFLSSLYMAS 175 (206)
Q Consensus 153 ~~~~~~~~~~~~gG~n~~~vl~~ 175 (206)
..++.+.++++|||+|+++|++.
T Consensus 359 ~~~~~l~~s~gfGG~na~lvl~~ 381 (381)
T PRK05952 359 PLQNVLCLSFGFGGQNAAIALGK 381 (381)
T ss_pred CCCEEEEeeecCCCeeEEEEEeC
Confidence 45566666677999999999863
No 17
>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=100.00 E-value=7.2e-35 Score=260.06 Aligned_cols=165 Identities=39% Similarity=0.507 Sum_probs=146.5
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG 80 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~ 80 (206)
+|||++++|||++++|+++|++||++|.|++.++|+.+.+.++ +.++.++|+++|+++|+ +||+|||+|||||+.+
T Consensus 230 ~gEGa~~lvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~p~--~~~~~~a~~~al~~ag~--~~i~~v~~hgtgt~~~ 305 (406)
T PRK08439 230 MGEGAGALVLEEYESAKKRGAKIYAEIIGFGESGDANHITSPA--PEGPLRAMKAALEMAGN--PKIDYINAHGTSTPYN 305 (406)
T ss_pred eeCceEEEEEccHHHHHHCCCeEEEEEEeEEccCCCCCCCCCC--HHHHHHHHHHHHHHcCC--CccCEEEccCCcCCCC
Confidence 5899999999999999999999999999999999987765544 47889999999999999 7999999999999999
Q ss_pred CHhhhhc-----------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCccccccccc
Q 045789 81 DLREYQA-----------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFISIP 149 (206)
Q Consensus 81 D~~E~~a-----------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (206)
|..|..+ +++++.|+++||+.+|||++++++++++|++++|||++|+.+++|+++++.++. +..
T Consensus 306 D~~E~~al~~~f~~~~~~~~v~s~K~~~Gh~~~AsG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~----~~~- 380 (406)
T PRK08439 306 DKNETAALKELFGSKEKVPPVSSTKGQIGHCLGAAGAIEAVISIMAMRDGILPPTINQETPDPECDLDYIPN----VAR- 380 (406)
T ss_pred CHHHHHHHHHHhcccCCCCeEECcccccccCchhhhHHHHHHHHHHHhCCeeCCCCCCCCCCCCCCcccCCC----ccc-
Confidence 9999998 479999999999999999999999999999999999999999999988776653 222
Q ss_pred ccCCCCeEEEEEeecccceeEEEccc
Q 045789 150 VIKQFKTRFVLISFNGSFLSSLYMAS 175 (206)
Q Consensus 150 ~~~~~~~~~~~~~~~gG~n~~~vl~~ 175 (206)
+.+.+..+.++++|||+|+|+||+.
T Consensus 381 -~~~~~~~l~nsfgfGG~n~~lvl~~ 405 (406)
T PRK08439 381 -KAELNVVMSNSFGFGGTNGVVIFKK 405 (406)
T ss_pred -cCCCCEEEEeeecCCCceEEEEEec
Confidence 2344566666667999999999975
No 18
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II. FabB sequences should fall well below the noise cutoff of this model.
Probab=100.00 E-value=8.3e-35 Score=258.61 Aligned_cols=168 Identities=49% Similarity=0.679 Sum_probs=150.3
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG 80 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~ 80 (206)
+|||++++||+++++|+++|+++|++|+|++.++|+.+.+.+.+.+..+.++++++|+++|++++||||||+|||||+.+
T Consensus 229 ~gEGAaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~Al~~Agi~~~dId~ve~h~tgt~~~ 308 (407)
T TIGR03150 229 MGEGAGVLVLEELEHAKARGAKIYAEIVGYGMSGDAYHITAPAPEGEGAARAMRAALKDAGINPEDVDYINAHGTSTPLG 308 (407)
T ss_pred EeceEEEEEEeeHHHHHHCCCeEEEEEEEEEECCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHhHCCEEeCcCCCCCCC
Confidence 48999999999999999999999999999999999987777777888899999999999999999999999999999999
Q ss_pred CHhhhhc-----------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCccccccccc
Q 045789 81 DLREYQA-----------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFISIP 149 (206)
Q Consensus 81 D~~E~~a-----------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (206)
|..|..+ ++|++.|+++||+.+|||++++++++++|++++|||++|+++|++.++++.++. +..+
T Consensus 309 D~~E~~a~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~~~v~~----~~~~ 384 (407)
T TIGR03150 309 DKAETKAIKRVFGDHAYKLAVSSTKSMTGHLLGAAGAIEAIFTVLAIRDGVVPPTINLDNPDPECDLDYVPN----EARE 384 (407)
T ss_pred CHHHHHHHHHHhccCCCCCceeCCcchhchhHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCccccCC----CCcc
Confidence 9999988 679999999999999999999999999999999999999999999887765432 2333
Q ss_pred ccCCCCeEEEEEeecccceeEEEcc
Q 045789 150 VIKQFKTRFVLISFNGSFLSSLYMA 174 (206)
Q Consensus 150 ~~~~~~~~~~~~~~~gG~n~~~vl~ 174 (206)
| +.++.+.++.+|||+|+|+||+
T Consensus 385 ~--~~~~~l~~s~gfgG~n~~~vl~ 407 (407)
T TIGR03150 385 R--KIDYALSNSFGFGGHNASLVFK 407 (407)
T ss_pred C--CcCEEEEecccCCCceEEEEeC
Confidence 3 2345566666799999999984
No 19
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=100.00 E-value=9.6e-35 Score=258.51 Aligned_cols=168 Identities=32% Similarity=0.455 Sum_probs=150.6
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG 80 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~ 80 (206)
+|||++++|||++++|+++|++||++|.|++.++|+.+.+.+. ++.++.++|+++|+++|++++||+|||+|||||+.+
T Consensus 229 ~gEGAaalvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~~~-~~~~~~~a~~~Al~~Agi~~~dId~i~~hgtgt~~~ 307 (407)
T cd00828 229 EAEGAGVLVLERAELALARGAPIYGRVAGTASTTDGAGRSVPA-GGKGIARAIRTALAKAGLSLDDLDVISAHGTSTPAN 307 (407)
T ss_pred eecceEEEEEeeHHHHHHCCCeEEEEEEEEEeccCCCCCCCCC-ChHHHHHHHHHHHHHcCCCHHHcCEEecccccCccc
Confidence 5899999999999999999999999999999999998766665 789999999999999999999999999999999999
Q ss_pred CHhhhhc-----------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCccccccccc
Q 045789 81 DLREYQA-----------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFISIP 149 (206)
Q Consensus 81 D~~E~~a-----------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (206)
|..|..+ +++++.|+++||+.+|||++++++++++|+++++||+.|+++++|++++.. ++.+..+
T Consensus 308 D~~E~~ai~~~~~~~~~~~~v~s~K~~~Gh~~~Asg~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~----~~~~~~~ 383 (407)
T cd00828 308 DVAESRAIAEVAGALGAPLPVTAQKALFGHSKGAAGALQLIGALQSLEHGLIPPTANLDDVDPDVEHLS----VVGLSRD 383 (407)
T ss_pred cHHHHHHHHHHHhccCCCceeecccchhccchhhhhHHHHHHHHHHHhcCccCCCCCCCCCCccccccc----ccCcCcc
Confidence 9999988 589999999999999999999999999999999999999999999885433 4445667
Q ss_pred ccCCCCeEEEEEeecccceeEEEc
Q 045789 150 VIKQFKTRFVLISFNGSFLSSLYM 173 (206)
Q Consensus 150 ~~~~~~~~~~~~~~~gG~n~~~vl 173 (206)
|+...++.+.++++|||+|+|+|+
T Consensus 384 ~~~~~~~al~~s~gfgG~n~~lv~ 407 (407)
T cd00828 384 LNLKVRAALVNAFGFGGSNAALVL 407 (407)
T ss_pred CCCCccEEEEecccCCCcceEEEC
Confidence 754334566666679999999986
No 20
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=100.00 E-value=1.7e-34 Score=259.11 Aligned_cols=171 Identities=35% Similarity=0.476 Sum_probs=153.4
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG 80 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~ 80 (206)
+|||++++|||+.++|+++|++||++|.|++.++|+.+.+.+.+++..+.++|+++|+++|++|+||+||++|||||+.+
T Consensus 243 ~GEGaaalVLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~AL~~agi~p~dId~i~~Hgtgt~~~ 322 (425)
T PRK06501 243 MAEGAGALVLESLESAVARGAKILGIVAGCGEKADSFHRTRSSPDGSPAIGAIRAALADAGLTPEQIDYINAHGTSTPEN 322 (425)
T ss_pred eeccEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEEecCccCcch
Confidence 58999999999999999999999999999999999988777888899999999999999999999999999999999999
Q ss_pred CHhhhhc-----------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCccccccccc
Q 045789 81 DLREYQA-----------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFISIP 149 (206)
Q Consensus 81 D~~E~~a-----------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (206)
|..|..+ ++|++.|+++||+.+|||++++++++++|++++|||++|+++|+|.++++.++.. .
T Consensus 323 d~~E~~al~~~~~~~~~~~pv~s~k~~~Gh~~~AsG~~~~~~~~l~l~~~~ipp~~n~~~~~~~~~~~~~~~~------~ 396 (425)
T PRK06501 323 DKMEYLGLSAVFGERLASIPVSSNKSMIGHTLTAAGAVEAVFSLLTIQTGRLPPTINYDNPDPAIPLDVVPNV------A 396 (425)
T ss_pred HHHHHHHHHHHhcccCCCcEEECCCcccCCCchhhhHHHHHHHHHHHhcCcCCCcCCCCCCCCCCCcccCCCc------c
Confidence 9999877 6899999999999999999999999999999999999999999999887665431 1
Q ss_pred ccCCCCeEEEEEeecccceeEEEccccC
Q 045789 150 VIKQFKTRFVLISFNGSFLSSLYMASCF 177 (206)
Q Consensus 150 ~~~~~~~~~~~~~~~gG~n~~~vl~~~~ 177 (206)
.+.+.+..+.++++|||+|+|+|++.+|
T Consensus 397 ~~~~~~~~l~ns~gfgG~n~~~vl~~~~ 424 (425)
T PRK06501 397 RDARVTAVLSNSFGFGGQNASLVLTAEP 424 (425)
T ss_pred cCCCCCEEEEeCccCCCeeEEEEEecCC
Confidence 1223344555556699999999999876
No 21
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=100.00 E-value=3.3e-34 Score=254.36 Aligned_cols=167 Identities=47% Similarity=0.657 Sum_probs=151.4
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG 80 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~ 80 (206)
+|||++++||++.++|+++|+++|++|+|++.++|+.+.+.+.+++.++.++++++|+++|++++||+|||+||+||+.+
T Consensus 229 ~geGA~a~vL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~agi~~~dId~v~~h~tgt~~~ 308 (406)
T cd00834 229 LGEGAGVLVLESLEHAKARGAKIYAEILGYGASSDAYHITAPDPDGEGAARAMRAALADAGLSPEDIDYINAHGTSTPLN 308 (406)
T ss_pred eeccEEEEEEecHHHHHHCCCeEEEEEEEEEecccCCCCCCCCCCcHHHHHHHHHHHHHcCCCHHHCCEEecccccCccc
Confidence 58999999999999999999999999999999999988777777899999999999999999999999999999999999
Q ss_pred CHhhhhc-----------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCccccccccc
Q 045789 81 DLREYQA-----------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFISIP 149 (206)
Q Consensus 81 D~~E~~a-----------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (206)
|..|..+ +++++.|+++||+.+|||++++++++++|+++++||++|+++|++..+++.++ .+..+
T Consensus 309 d~~E~~al~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~----~~~~~ 384 (406)
T cd00834 309 DAAESKAIKRVFGEHAKKVPVSSTKSMTGHLLGAAGAVEAIATLLALRDGVLPPTINLEEPDPECDLDYVP----NEARE 384 (406)
T ss_pred cHHHHHHHHHHhcccCCCCceeCcchhhccchhhhhHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCccccC----CCCcc
Confidence 9999987 68999999999999999999999999999999999999999999876665444 35577
Q ss_pred ccCCCCeEEEEEeecccceeEEEc
Q 045789 150 VIKQFKTRFVLISFNGSFLSSLYM 173 (206)
Q Consensus 150 ~~~~~~~~~~~~~~~gG~n~~~vl 173 (206)
|+. ++.++++.+|||+|+|+||
T Consensus 385 ~~~--~~~l~~s~g~gG~n~~~vl 406 (406)
T cd00834 385 API--RYALSNSFGFGGHNASLVF 406 (406)
T ss_pred ccc--cEEEEeeecCCceeeEEEC
Confidence 754 5566666679999999986
No 22
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=100.00 E-value=8.4e-34 Score=253.52 Aligned_cols=176 Identities=31% Similarity=0.400 Sum_probs=160.6
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG 80 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~ 80 (206)
+|||++++||+++++|+++|+++|++|+|++.++|+.+.....|+...+.++|+++|+++|++++|||||++|||||+.+
T Consensus 233 ~geGAaalVLe~~e~A~~~g~~i~a~I~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~dId~i~~h~tgt~~~ 312 (424)
T smart00825 233 RGEGVGVVVLKRLSDALRDGDPILAVIRGSAVNQDGRSNGLTAPSGPAQARLIRQALARAGVDPADVDYVEAHGTGTPLG 312 (424)
T ss_pred ccceEEEEEEccHHHHHHCCCeEEEEEEEEEEeCCCCCCCCCCcCHHHHHHHHHHHHHHhCCCHHHccEEEeeCCCCCCC
Confidence 58999999999999999999999999999999999887767778899999999999999999999999999999999999
Q ss_pred CHhhhhc--------------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCcccccc
Q 045789 81 DLREYQA--------------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFI 146 (206)
Q Consensus 81 D~~E~~a--------------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~ 146 (206)
|..|..+ ++|++.|+++||+.+|+|++++++++++|++++|||++|+++|++.++++..+++++.+
T Consensus 313 d~~E~~al~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~ 392 (424)
T smart00825 313 DPIEAEALAAVFGQGRPRDGPLLLGSVKSNIGHLEAAAGVAGLIKVVLALRHGTIPPTLHFETPNPHIDLEESPLRVPTE 392 (424)
T ss_pred CHHHHHHHHHHHhccCCCCCceEEeccccccCCcccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcccCceEccCC
Confidence 9999766 57899999999999999999999999999999999999999999999998889999999
Q ss_pred cccccCC--CCeEEEEEeecccceeEEEcccc
Q 045789 147 SIPVIKQ--FKTRFVLISFNGSFLSSLYMASC 176 (206)
Q Consensus 147 ~~~~~~~--~~~~~~~~~~~gG~n~~~vl~~~ 176 (206)
..+|++. .+..+.++.+|||+|+|+||+++
T Consensus 393 ~~~~~~~~~~~~~l~~s~gfgg~n~~lvl~~~ 424 (424)
T smart00825 393 ATPWPATGRPRRAGVSSFGFGGTNAHVILEEA 424 (424)
T ss_pred CcCCCCCCCccEEEEeccCCCCceEEEEEecC
Confidence 9999632 34455555569999999999864
No 23
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=100.00 E-value=2e-33 Score=251.13 Aligned_cols=165 Identities=33% Similarity=0.540 Sum_probs=145.0
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG 80 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~ 80 (206)
+|||++++||+++++|.++|+++|++|+|+++++|+.+. +.|+..++.++|+++|+++|++|+||+|||+|||||+.+
T Consensus 237 ~gEGaaalvLe~~~~A~~~g~~i~a~I~g~~~~~d~~~~--~~p~~~~~~~a~~~Al~~Agi~~~dId~v~~hgtgt~~~ 314 (410)
T PRK07103 237 YGEACGAVVLESAESARRRGARPYAKLLGWSMRLDANRG--PDPSLEGEMRVIRAALRRAGLGPEDIDYVNPHGTGSPLG 314 (410)
T ss_pred EeeeEEEEEEccHHHHHHCCCceEEEEEEEEEecCCCCC--CCCCHHHHHHHHHHHHHHcCCCHHHCCEEEccCCCCCCC
Confidence 589999999999999999999999999999999998874 467788889999999999999999999999999999999
Q ss_pred CHhhhhc--------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCC-CCCCCCCCCCccccccccccc
Q 045789 81 DLREYQA--------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENP-DKHVLSRTSGASAAFISIPVI 151 (206)
Q Consensus 81 D~~E~~a--------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 151 (206)
|..|..+ ++|++.|+++||+.+|||++++++++++|++++|||++|+++| ++.++ .++. .+++
T Consensus 315 D~~E~~al~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~--~v~~------~~~~ 386 (410)
T PRK07103 315 DETELAALFASGLAHAWINATKSLTGHGLSAAGIVELIATLLQMRAGFLHPSRNLDEPIDERFR--WVGS------TAES 386 (410)
T ss_pred CHHHHHHHhcCCCCCCeEECCCcccccCchhhhHHHHHHHHHHHhCCeeCCCCCCCCCCCCCcC--ccCC------CCcC
Confidence 9999988 7899999999999999999999999999999999999999987 55432 2221 2333
Q ss_pred CCCCeEEEEEeecccceeEEEccc
Q 045789 152 KQFKTRFVLISFNGSFLSSLYMAS 175 (206)
Q Consensus 152 ~~~~~~~~~~~~~gG~n~~~vl~~ 175 (206)
...++.+.++++|||+|+|+|+++
T Consensus 387 ~~~~~~l~~s~gfGG~n~~~vl~~ 410 (410)
T PRK07103 387 ARIRYALSLSFGFGGINTALVLER 410 (410)
T ss_pred CCCCEEEEecccCCCceEEEEEeC
Confidence 444566666677999999999873
No 24
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=100.00 E-value=4e-33 Score=248.32 Aligned_cols=173 Identities=31% Similarity=0.414 Sum_probs=157.5
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG 80 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~ 80 (206)
+|||++++||+++++|.++|+++|++|+|++.++|+.+.....|+...+.++++++|+++|++++||||||+|||||+.+
T Consensus 233 ~geGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~p~~~~~~~a~~~al~~Agi~~~did~i~~hgtgt~~~ 312 (421)
T cd00833 233 RGEGVGVVVLKRLSDALRDGDRIYAVIRGSAVNQDGRTKGITAPSGEAQAALIRRAYARAGVDPSDIDYVEAHGTGTPLG 312 (421)
T ss_pred eeceEEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCcCCCHHHHHHHHHHHHHHhCCCHHHCcEEEeeCCCCCCC
Confidence 48999999999999999999999999999999999887666677899999999999999999999999999999999999
Q ss_pred CHhhhhc--------------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCcccccc
Q 045789 81 DLREYQA--------------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFI 146 (206)
Q Consensus 81 D~~E~~a--------------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~ 146 (206)
|..|..+ +++++.|+++||+.+|+|++++++++++|+++.+||++|++++++.++++...+.++++
T Consensus 313 D~~E~~al~~~f~~~~~~~~~~~v~s~k~~~Gh~~~aag~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~ 392 (421)
T cd00833 313 DPIEVEALAKVFGGSRSADQPLLIGSVKSNIGHLEAAAGLAGLIKVVLALEHGVIPPNLHFETPNPKIDFEESPLRVPTE 392 (421)
T ss_pred CHHHHHHHHHHHhccCCCCCceeeecCcCccccchhhhHHHHHHHHHHHHhcCCcCCcCCCCCCCCCCCcccCCeEeeCC
Confidence 9999877 37899999999999999999999999999999999999999999999988888888999
Q ss_pred cccccCC--CCeEEEEEeecccceeEEEc
Q 045789 147 SIPVIKQ--FKTRFVLISFNGSFLSSLYM 173 (206)
Q Consensus 147 ~~~~~~~--~~~~~~~~~~~gG~n~~~vl 173 (206)
..+|+.. .++.+.++.+|||+|+|+|+
T Consensus 393 ~~~~~~~~~~~~~~~~sfgfgg~n~~~vl 421 (421)
T cd00833 393 ARPWPAPAGPRRAGVSSFGFGGTNAHVIL 421 (421)
T ss_pred CccCCCCCCCeEEEEeCcCCCCceeEEeC
Confidence 8998754 33444444459999999986
No 25
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=99.98 E-value=1.8e-32 Score=258.84 Aligned_cols=172 Identities=24% Similarity=0.370 Sum_probs=160.0
Q ss_pred CceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCC-CCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789 2 GEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYH-ITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG 80 (206)
Q Consensus 2 gEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~-~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~ 80 (206)
+||+++++|.|.+.|+ ++||.|.-..+|.||+. -+.+.|+++-|.+.+++.|+++|++|+++-|||+|||||++|
T Consensus 234 seg~~avllqrk~~Ar----RvYAtilnartNTDGfKEqGvTfP~G~~Q~qLi~e~Yse~Gl~P~sv~YvEAHGtGTkVG 309 (2376)
T KOG1202|consen 234 SEGVVAVLLQRKSLAR----RVYATILNARTNTDGFKEQGVTFPSGDMQEQLIRETYSEAGLNPESVVYVEAHGTGTKVG 309 (2376)
T ss_pred cCceEEEEEehhHHHH----HHHHHhhccccCCCchhhcCccCCCcHHHHHHHHHHHHhcCCCcccEEEEEeccCCCCCC
Confidence 6999999999999998 79999999999999985 777889999999999999999999999999999999999999
Q ss_pred CHhhhhc------------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCC-CCCCCccccccc
Q 045789 81 DLREYQA------------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVL-SRTSGASAAFIS 147 (206)
Q Consensus 81 D~~E~~a------------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~-~~~~~~~~~~~~ 147 (206)
|+.|+.+ +.|||+|+|+||++-|||+.+|.|.+++|++|.|||++||.+|||++. +-+.++.+.+++
T Consensus 310 DpQEaN~it~~fC~~Rt~pLLIGSvKSNMGHaEPASGv~alaKillsmE~glip~NLHy~tPNp~ip~L~dGrLkVVd~~ 389 (2376)
T KOG1202|consen 310 DPQEANGITRFFCATRTTPLLIGSVKSNMGHAEPASGVCALAKILLSMEEGLIPPNLHYNTPNPEIPALVDGRLKVVDRP 389 (2376)
T ss_pred ChHHhhhHHHHHhhcCCCceEeeeccccCCCCCccchHHHHHHHHHHHHhCcCCCccccCCCCCCcchhccceeEEecCC
Confidence 9999998 679999999999999999999999999999999999999999999995 888899999999
Q ss_pred ccccCCCCeEEEEEee-cccceeEEEccccCCCC
Q 045789 148 IPVIKQFKTRFVLISF-NGSFLSSLYMASCFRAR 180 (206)
Q Consensus 148 ~~~~~~~~~~~~~~~~-~gG~n~~~vl~~~~~~~ 180 (206)
.||+.+ .+.+|+| |||.|+|+||+..+...
T Consensus 390 lp~~GG---ivGiNSFGFGGsN~HviLks~~~~~ 420 (2376)
T KOG1202|consen 390 LPWRGG---IVGINSFGFGGSNAHVILKSNTKPK 420 (2376)
T ss_pred CCccCc---eeeeeccccCCCceeEEeccCCCCC
Confidence 999766 6677776 99999999999876444
No 26
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=99.98 E-value=1.1e-31 Score=238.56 Aligned_cols=163 Identities=33% Similarity=0.431 Sum_probs=142.2
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG 80 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~ 80 (206)
+|||++++||+++ ++.+ .+|.|++.++|+.+...++|++.++.++|+++|+++|++++|||||++|||||+.+
T Consensus 221 ~gEGaa~vVLe~~-----~~~~--~~I~g~g~~~d~~~~~~~~~~~~~~~~a~~~Al~~Agl~~~dId~v~~hgtgt~~~ 293 (392)
T PRK09185 221 IGEAAAFFLLERE-----DDAA--VALLGVGESSDAHHMSAPHPEGLGAILAMQQALADAGLAPADIGYINLHGTATPLN 293 (392)
T ss_pred eeceEEEEEEEEc-----CCCc--EEEEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHccEEEeCCCCCcCC
Confidence 5899999999997 3333 57999999999998877888899999999999999999999999999999999999
Q ss_pred CHhhhhc--------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCcccccccccccC
Q 045789 81 DLREYQA--------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFISIPVIK 152 (206)
Q Consensus 81 D~~E~~a--------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (206)
|..|..+ +++++.|+++||+++|||++++++++++|+++++||+.|+++++|.++++... .+..+|
T Consensus 294 D~~E~~al~~~f~~~~pv~s~K~~~Gh~~~AaG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~----~~~~~~-- 367 (392)
T PRK09185 294 DAMESRAVAAVFGDGVPCSSTKGLTGHTLGAAGAVEAAICWLALRHGLPPHGWNTGQPDPALPPLYLV----ENAQAL-- 367 (392)
T ss_pred CHHHHHHHHHHhCCCCceeCCCcccccChhhcchHHHHHHHHHHhcCCCCCCCCCCCCCCCCCccccC----CCCccC--
Confidence 9999988 68999999999999999999999999999999999999999999988754333 333333
Q ss_pred CCCeEEEEEeecccceeEEEcccc
Q 045789 153 QFKTRFVLISFNGSFLSSLYMASC 176 (206)
Q Consensus 153 ~~~~~~~~~~~~gG~n~~~vl~~~ 176 (206)
..++.+.++++|||+|+|+||+.+
T Consensus 368 ~~~~~l~~s~gfgG~n~~lvl~~~ 391 (392)
T PRK09185 368 AIRYVLSNSFAFGGNNCSLIFGRA 391 (392)
T ss_pred CCCEEEEeCccCCceeEEEEEEeC
Confidence 345566666679999999999864
No 27
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.96 E-value=3.6e-28 Score=216.34 Aligned_cols=150 Identities=18% Similarity=0.188 Sum_probs=126.0
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG 80 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~ 80 (206)
+|||++++|||++++|++||++|||+|.|++...+ . . +..++.++|++||++||+ ++|||||++|||||+.+
T Consensus 241 ~GEGAa~lvLE~~~~A~~Rga~i~AeI~G~~~d~~--~----~-~~~~~~~am~~AL~~Agl-~~~IdyI~ahgtgT~~~ 312 (398)
T PRK06519 241 LGSGGAFLVLESREHAEARGARPYARISGVESDRA--R----R-APGDLEASLERLLKPAGG-LAAPTAVISGATGAHPA 312 (398)
T ss_pred eeceEEEEEEeeHHHHHhCCCceEEEEEEEeecCC--C----C-ChHHHHHHHHHHHHHCCC-cccCCEEEeCCCCCCCc
Confidence 59999999999999999999999999999964332 1 1 345789999999999999 89999999999999999
Q ss_pred CHhhhhc------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCcccccccccccCCC
Q 045789 81 DLREYQA------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFISIPVIKQF 154 (206)
Q Consensus 81 D~~E~~a------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (206)
|..|..| ++|+|.|+++||+.+|+|+++++.++++|++|+|||++|+ +|+ .|...+.
T Consensus 313 D~~E~~Ai~~~f~~pvsS~Ks~~GH~l~AAGa~e~i~~~lal~~g~vpp~~n~---~~~--------------~~~~~~~ 375 (398)
T PRK06519 313 TAEEKAALEAALAGPVRGIGTLFGHTMEAQFPLGLALAALSVSKGALFPPFDA---SGE--------------KPMSGAA 375 (398)
T ss_pred cHHHHHHHHHHcCCCccccchhhccchHHHHHHHHHHHHHHHhcCccCCCCCC---Ccc--------------cCccccc
Confidence 9999988 6899999999999999999999999999999999999986 222 1222333
Q ss_pred CeEEEEEeecccceeEEEccc
Q 045789 155 KTRFVLISFNGSFLSSLYMAS 175 (206)
Q Consensus 155 ~~~~~~~~~~gG~n~~~vl~~ 175 (206)
...++++.+++|.-...+++.
T Consensus 376 ~~~~~~~~~~~~~~~~~~~~~ 396 (398)
T PRK06519 376 REAVVTTVGHWRGEGMALVEA 396 (398)
T ss_pred cEEEEEeeccCCcceeEEEEe
Confidence 446666667777766666553
No 28
>PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A ....
Probab=99.94 E-value=6.1e-28 Score=181.25 Aligned_cols=105 Identities=35% Similarity=0.552 Sum_probs=89.8
Q ss_pred eEEEEEEEecCCC-CCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcCCHhhhhc-------------ce
Q 045789 24 YAEILDGSLTCDA-YHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREYQA-------------LR 89 (206)
Q Consensus 24 ~a~I~g~~~~~dg-~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~E~~a-------------~~ 89 (206)
||+|+|+++++|| .+.+.+.|++.++.++|+++|++++++|+||+|||+||+||+.+|..|..+ ++
T Consensus 1 ya~i~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agi~~~~I~~i~~hg~Gt~~~D~~E~~ai~~~~~~~~~~~~~~ 80 (119)
T PF02801_consen 1 YAVIRGYGVNSDGARSSSLTAPNGAALARAIRRALADAGISPEDIDYIEAHGTGTPLGDAAEAEAIARVFGDSARQQPVP 80 (119)
T ss_dssp SEEEEEEEEEE-SSSTSSSSSTTHHHHHHHHHHHHHHHTS-GGGEEEEE----SSHHHHHHHHHHHHHHHGGGGGTSTSE
T ss_pred CEEEEEEEEECCCCCCCCCcCcCHHHHHHHHHHHHhhhccccccceeeeeeccccccchhhhhhhhhhhhcccccccccc
Confidence 8999999999999 788899999999999999999999999999999999999999999999988 58
Q ss_pred eccccccccccccccchHHHHHHHHHhhhcccCCCCCCC
Q 045789 90 MNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLE 128 (206)
Q Consensus 90 v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~ 128 (206)
|+++|+++||++++||+++|++++++|++++|||++||+
T Consensus 81 v~s~K~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~n~~ 119 (119)
T PF02801_consen 81 VGSVKSNIGHTEAASGLLSLAKALLALEHGTIPPTINFE 119 (119)
T ss_dssp EE-THHHH-B-GGGHHHHHHHHHHHHHHHTEE--BTT-S
T ss_pred eeccccccccccccchHHHHHHHHHHHhcCCCCCCcCCC
Confidence 999999999999999999999999999999999999975
No 29
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=99.90 E-value=6.6e-23 Score=177.01 Aligned_cols=165 Identities=30% Similarity=0.466 Sum_probs=143.9
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG 80 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~ 80 (206)
+|||++++||++.+.|.++|.++|++|.++....++.......+....+.++++++|+++|++++||+|++.|+++++..
T Consensus 159 ~gdGaaA~vL~~~~~a~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~agl~~~did~~~~h~~~~~~~ 238 (332)
T cd00825 159 FGDGAGALVVEELEHALARGAHIYAEIVGTAATIDGAGMGAFAPSAEGLARAAKEALAVAGLTVWDIDYLVAHGTGTPIG 238 (332)
T ss_pred EEeeEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCcCHHHHHHHHHHHHHHcCCCHhHCCEEEccCCCCCCC
Confidence 48999999999999999999999999999999988876555567788899999999999999999999999999999999
Q ss_pred CHhhhhc---------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCccccccccccc
Q 045789 81 DLREYQA---------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFISIPVI 151 (206)
Q Consensus 81 D~~E~~a---------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (206)
|..|..+ +++.+.|.++||+.+|++++.|++++..++++.+||++|+.++++... . +.. ..++
T Consensus 239 ~~~e~~~~~~~~~~~~~~~~~~~~~~G~~~aas~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~--~----~~~--~~~~ 310 (332)
T cd00825 239 DVKELKLLRSEFGDKSPAVSATKAMTGNLSSAAVVLAVDEAVLMLEHGFIPPSIHIEELDEAGL--N----IVT--ETTP 310 (332)
T ss_pred CHHHHHHHHHHhCCCCceeECCCcccccchhHhHHHHHHHHHHHHhcCccCCCCCCCCCCcccC--c----ccC--CCCC
Confidence 9999877 368899999999999999999999999999999999999999987221 1 122 2344
Q ss_pred CCCCeEEEEEeecccceeEEEc
Q 045789 152 KQFKTRFVLISFNGSFLSSLYM 173 (206)
Q Consensus 152 ~~~~~~~~~~~~~gG~n~~~vl 173 (206)
.+.++.+.++.++||+++|+|+
T Consensus 311 ~~~~~~l~~~~G~Gg~~~~~vl 332 (332)
T cd00825 311 RELRTALLNGFGLGGTNATLVL 332 (332)
T ss_pred CCCCEEEEeeecCCCeeEEEeC
Confidence 4556777777789999999986
No 30
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=99.85 E-value=3.6e-21 Score=168.86 Aligned_cols=121 Identities=21% Similarity=0.201 Sum_probs=108.7
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCC-CCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCc
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITA-PHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRL 79 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~-~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~ 79 (206)
+|||++++||++.++|++++++||+ .|++.+.++.+... ..+++.++.++|+++|+++|++++||+||++|++||+.
T Consensus 189 ~GEGA~a~vLe~~~~A~~rga~i~a--~g~~~~~~~~~~~~~~p~~g~gl~~ai~~AL~~agl~~~dId~v~ah~~gt~~ 266 (348)
T PRK06147 189 PGEAAAAVLLGRPAGGEAPGLPLLG--LGLGREPAPVGESEDLPLRGDGLTQAIRAALAEAGCGLEDMDYRIADLNGEQY 266 (348)
T ss_pred eeceEEEEEEccHhhhhcCCCceEE--EEEeecCCCcccCCCCCCChHHHHHHHHHHHHHcCCCHHHCCEEEcCCCCCcc
Confidence 5999999999999999999999999 67777777653332 22378999999999999999999999999999999999
Q ss_pred CCHhhhhc-----------ceeccccccccccccccchHHHHHHHHHhhhcccCC
Q 045789 80 GDLREYQA-----------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHP 123 (206)
Q Consensus 80 ~D~~E~~a-----------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp 123 (206)
+|..|..+ .++.+.|+++||+.+|+|+++++.++++|++|++|+
T Consensus 267 ~d~~e~~A~~~~f~~~~~~~~~~~~k~~~Gh~~aAaG~~~~~~a~~~~~~g~~~g 321 (348)
T PRK06147 267 RFKEAALAEMRLFRVRKEFFDLWHPAECIGEIGAAIGPALLGVALAASRKGYGPG 321 (348)
T ss_pred chHHHHHHHHHHhhhccCCCceecchHhhcchHHHHHHHHHHHHHHHHHcCcCCC
Confidence 99999876 568899999999999999999999999999999985
No 31
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=99.78 E-value=3.7e-18 Score=142.02 Aligned_cols=146 Identities=29% Similarity=0.438 Sum_probs=127.0
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG 80 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~ 80 (206)
+|||++++||++.+.+.+++.+++++|.++....++.... ..+......++++++|+++|++++||++++.|.+++...
T Consensus 100 ~gdGAaa~vL~~~~~a~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~i~~~l~~ag~~~~did~~~~h~~~~~~~ 178 (254)
T cd00327 100 FGDGAAAAVVESEEHALRRGAHPQAEIVSTAATFDGASMV-PAVSGEGLARAARKALEGAGLTPSDIDYVEAHGTGTPIG 178 (254)
T ss_pred ecceEEEEEECcHHHHHHCCCceEEEEEEEEEcCCCCCCC-CCCChHHHHHHHHHHHHHcCCCHHHCCEEEccCCcCccc
Confidence 5899999999999999999999999999998877765422 345678899999999999999999999999999999999
Q ss_pred CHhhhhc---------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCccccccccccc
Q 045789 81 DLREYQA---------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFISIPVI 151 (206)
Q Consensus 81 D~~E~~a---------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (206)
|..|..+ +++.+.+..+||+.+|+++..+.+++..++.+.+||. +
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~as~~~~l~~~~~~~~~~~~~~~--------------------------~ 232 (254)
T cd00327 179 DAVELALGLDPDGVRSPAVSATLIMTGHPLGAAGLAILDELLLMLEHEFIPPT--------------------------P 232 (254)
T ss_pred cHHHHHHHHHHhCCCCCceeccccccccchHHHHHHHHHHHHHHHhCCCcCCC--------------------------C
Confidence 9998876 3678999999999999999999999999999999981 1
Q ss_pred CCCCeEEEEEeecccceeEEEc
Q 045789 152 KQFKTRFVLISFNGSFLSSLYM 173 (206)
Q Consensus 152 ~~~~~~~~~~~~~gG~n~~~vl 173 (206)
.+..+.+.++.++||+++++|+
T Consensus 233 ~~~~~~l~~~~g~Gg~~~~~~l 254 (254)
T cd00327 233 REPRTVLLLGFGLGGTNAAVVL 254 (254)
T ss_pred CCcCEEEEeeEcCCCcceEEEC
Confidence 2334567777789999999985
No 32
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=99.60 E-value=3.6e-15 Score=132.52 Aligned_cols=135 Identities=23% Similarity=0.333 Sum_probs=107.5
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG 80 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~ 80 (206)
++||++++||++++.|++++++++++|+|++.+.++.. .......++++++|+++||+|+|||++|+|.+.+..
T Consensus 244 ~~dGaaavvl~s~~~a~~~~~~~~~~I~g~~~~~~~~~-----~~~~~~~~a~~~a~~~Agi~~~did~~e~~d~f~~~- 317 (386)
T cd00751 244 INDGAAAVLLMSEEKAKELGLKPLARIVGYAVAGVDPA-----IMGIGPVPAIPKALKRAGLTLDDIDLIEINEAFAAQ- 317 (386)
T ss_pred CCcceEEEEEecHHHHHHCCCCeeEEEEEEEEccCCCc-----ccchhHHHHHHHHHHHcCCCHHHcCEEEeechhHHH-
Confidence 48999999999999999999999999999999876532 234456799999999999999999999999887641
Q ss_pred CHhhhhc-------ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCcccccccccccCC
Q 045789 81 DLREYQA-------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFISIPVIKQ 153 (206)
Q Consensus 81 D~~E~~a-------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (206)
.....+. +++...+..+||+.+|+|+..+++++++|+.. .
T Consensus 318 ~~~~~e~lg~~~~pvn~~GG~l~~Gh~~gasG~~~~~e~~~qL~g~---------------------------------~ 364 (386)
T cd00751 318 ALACLKELGLDPEKVNVNGGAIALGHPLGASGARIVVTLLHELKRR---------------------------------G 364 (386)
T ss_pred HHHHHHHhCCChhhcCCCcchHhhCccHHHHHHHHHHHHHHHHHhc---------------------------------C
Confidence 2222221 45566666889999999999999999999853 1
Q ss_pred CCeEEEEEeecccceeEEEcc
Q 045789 154 FKTRFVLISFNGSFLSSLYMA 174 (206)
Q Consensus 154 ~~~~~~~~~~~gG~n~~~vl~ 174 (206)
.++.++...+.||..+++|||
T Consensus 365 ~~~gl~~~~~~gg~g~~~~ie 385 (386)
T cd00751 365 GRYGLATMCIGGGQGAAMVIE 385 (386)
T ss_pred CCEEEEEEcccccceEEEEEE
Confidence 233555556688999999987
No 33
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=99.56 E-value=1.7e-14 Score=128.32 Aligned_cols=113 Identities=27% Similarity=0.386 Sum_probs=92.2
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG 80 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~ 80 (206)
++||++++||++++.|++++.+++++|.|++...+. +.+......++++++|+++||+|+|||++|.|.+.+..
T Consensus 245 ~~dGAaa~vl~s~~~A~~~~~~~~~~i~g~g~~~~~-----~~~~~~~~~~a~~~a~~~Agi~~~did~~e~~d~fa~~- 318 (386)
T TIGR01930 245 LNDGAAALLLMSEERAKELGLTPLARIVSFAVAGVD-----PEIMGLGPVPAIPKALKKAGLSISDIDLFEINEAFAAQ- 318 (386)
T ss_pred CCcceeEEEEecHHHHHHCCCCccEEEEEEEEecCC-----CccccccHHHHHHHHHHHcCCCHHHCCeeehcchhHHH-
Confidence 589999999999999999999999999999887431 22234455799999999999999999999999888742
Q ss_pred CHhhhhc-------ceeccccccccccccccchHHHHHHHHHhhhc
Q 045789 81 DLREYQA-------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTG 119 (206)
Q Consensus 81 D~~E~~a-------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~ 119 (206)
..+..++ +++.+.+..+||+.+++|+..++.++++|+..
T Consensus 319 ~~~~~e~lG~~~~pvn~~GG~l~~Ghp~gasG~~~~~e~~~qL~g~ 364 (386)
T TIGR01930 319 VLACIKELGLDLEKVNVNGGAIALGHPLGASGARIVTTLLHELKRR 364 (386)
T ss_pred HHHHHHHhCCChhhcCCCCChHhhCCcHHHHHHHHHHHHHHHHHhc
Confidence 2222221 55677777899999999999999999999864
No 34
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=99.56 E-value=2.7e-14 Score=127.34 Aligned_cols=107 Identities=26% Similarity=0.372 Sum_probs=90.8
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG 80 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~ 80 (206)
++||++++||++++.|+++|.+++++|.|++.... .+.+.+.+..++++++|+++|++++|||++|+|.+.+
T Consensus 250 ~~DGAaa~vl~s~~~A~~~g~~~~a~i~g~~~~~~-----~~~~~~~~~~~a~~~al~~agl~~~dId~~e~~d~f~--- 321 (393)
T PRK05656 250 LNDGAAAVLLMSAAKAKALGLPVLAKIAAYANAGV-----DPAIMGIGPVSATRRCLDKAGWSLAELDLIEANEAFA--- 321 (393)
T ss_pred CCCceEEEEEecHHHHHHCCCCeeEEEEEEEEecC-----CCcccchhHHHHHHHHHHHcCCCHHHCCEEEecCccH---
Confidence 58999999999999999999999999999987642 3344456778999999999999999999999997643
Q ss_pred CHhhhhc-----------ceeccccccccccccccchHHHHHHHHHhh
Q 045789 81 DLREYQA-----------LRMNSTKSLIGHLLGASGAAEAVATIKAIQ 117 (206)
Q Consensus 81 D~~E~~a-----------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~ 117 (206)
.|..+ +++.+.|..+||+.+|+|+..++.++..|+
T Consensus 322 --~~~~~~~e~lg~~~~~vn~~Gg~~a~GHp~gAsG~~~~~~l~~~l~ 367 (393)
T PRK05656 322 --AQSLAVGKELGWDAAKVNVNGGAIALGHPIGASGCRVLVTLLHEMI 367 (393)
T ss_pred --HHHHHHHHHhCCCCccCCcCCCHHHhCccHHHHHHHHHHHHHHHHH
Confidence 22222 678899999999999999999999998665
No 35
>PRK05790 putative acyltransferase; Provisional
Probab=99.51 E-value=1.9e-13 Score=121.78 Aligned_cols=138 Identities=22% Similarity=0.309 Sum_probs=105.4
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG 80 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~ 80 (206)
++||++++||++++.|++.+.+++++|+|++..... +.....+...+++++|+++|++++|||++|.|...+...
T Consensus 250 ~~DGAaavvl~s~e~a~~~~~~~~~~I~g~~~~~~~-----~~~~~~~~~~a~~~a~~~Agi~~~did~~e~~d~f~~~~ 324 (393)
T PRK05790 250 INDGAAAVVVMSEAKAKELGLTPLARIVSYAVAGVD-----PAIMGIGPVPAIRKALEKAGWSLADLDLIEINEAFAAQA 324 (393)
T ss_pred CCCceEEEEEecHHHHHHCCCCeeEEEEEEEEccCC-----CCccchhHHHHHHHHHHHcCCCHHHCCEEEeCcHHHHHH
Confidence 479999999999999999999999999999887432 122234567899999999999999999999886655311
Q ss_pred -CHhhhhc-----ceeccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCCCCCCcccccccccccCCC
Q 045789 81 -DLREYQA-----LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLSRTSGASAAFISIPVIKQF 154 (206)
Q Consensus 81 -D~~E~~a-----~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (206)
-..|... +++.+.+..+||+.+|+|+..++.++.+|+.. +.
T Consensus 325 l~~~e~lg~~~~pvN~~GG~l~~Ghp~gatG~~~~~e~~~qL~~~---------------------------------~~ 371 (393)
T PRK05790 325 LAVEKELGLDPEKVNVNGGAIALGHPIGASGARILVTLLHEMKRR---------------------------------GA 371 (393)
T ss_pred HHHHHHhCCChhhcCCCcchhhhCcchhhhHHHHHHHHHHHHHhc---------------------------------CC
Confidence 0011111 56677778889999999999999999999863 11
Q ss_pred CeEEEEEeecccceeEEEcccc
Q 045789 155 KTRFVLISFNGSFLSSLYMASC 176 (206)
Q Consensus 155 ~~~~~~~~~~gG~n~~~vl~~~ 176 (206)
++.++..-+.+|..+++|||.|
T Consensus 372 ~~gl~~~~~~~g~g~~~~~e~~ 393 (393)
T PRK05790 372 KKGLATLCIGGGQGVALIVERP 393 (393)
T ss_pred CeEEEEEeccCCceeEEEEEcC
Confidence 2344555567899999998864
No 36
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=99.47 E-value=2.4e-13 Score=121.29 Aligned_cols=111 Identities=26% Similarity=0.317 Sum_probs=90.2
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG 80 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~ 80 (206)
++||++++||++++.|++.+.+++++|+|++...+. +...+.....+++++|+++|++++||||+|.|...+. .
T Consensus 251 ~~DGAaavvl~s~~~A~~~~~~~~a~i~g~~~~~~~-----~~~~~~~~~~a~~~al~~Agl~~~dId~~e~~d~f~~-~ 324 (394)
T PRK06445 251 LNSGASYVLLMSKKAVKKYGLKPMAKIRSFGFAGVP-----PAIMGKGPVPASKKALEKAGLSVKDIDLWEINEAFAV-V 324 (394)
T ss_pred CCCceEEEEEecHHHHHHCCCCceEEEEEEEEeccC-----CchhcchHHHHHHHHHHHcCCCHHHcCEEEecccchH-H
Confidence 589999999999999999999999999999887542 2233456788999999999999999999999988774 2
Q ss_pred CHhhhhc-------ceeccccccccccccccchHHHHHHHHHhh
Q 045789 81 DLREYQA-------LRMNSTKSLIGHLLGASGAAEAVATIKAIQ 117 (206)
Q Consensus 81 D~~E~~a-------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~ 117 (206)
....++. +++..-.-.+||+.+|+|+..++.++.+|+
T Consensus 325 ~l~~~e~lg~~~~~vN~~GG~la~Ghp~gatG~~~v~e~~~qL~ 368 (394)
T PRK06445 325 VLYAIKELGLDPETVNIKGGAIAIGHPLGATGARIVGTLARQLQ 368 (394)
T ss_pred HHHHHHHhCCCccccCCCCCHHHcCCCccchHHHHHHHHHHHHH
Confidence 2333333 344444555799999999999999999997
No 37
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=99.47 E-value=7.6e-14 Score=124.35 Aligned_cols=113 Identities=23% Similarity=0.281 Sum_probs=91.3
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG 80 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~ 80 (206)
++||++++||++++.|+++|.+++++|+|++...+.. ...+....++++++|+++||+|+||||+|.|...+...
T Consensus 249 ~sDGAaalvl~see~A~~~g~~p~a~I~g~~~~~~~~-----~~~~~~~~~a~~~Al~~AGl~p~DID~~ei~dafa~~~ 323 (392)
T PRK06633 249 INDGAACLMVVSEEALKKHNLTPLARIVSYASAGVDP-----SIMGTAPVPASQKALSKAGWSVNDLEVIEVNEAFAAQS 323 (392)
T ss_pred ccCceEEEEEecHHHHHHCCCCeeEEEEEEEEecCCc-----chhchHHHHHHHHHHHHcCCCHHHcCeeehhhHHHHHH
Confidence 5899999999999999999999999999998875422 22235568899999999999999999999886654321
Q ss_pred CHh-hh-----hcceeccccccccccccccchHHHHHHHHHhhh
Q 045789 81 DLR-EY-----QALRMNSTKSLIGHLLGASGAAEAVATIKAIQT 118 (206)
Q Consensus 81 D~~-E~-----~a~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~ 118 (206)
=.. |. .-+++.+.|..+||+.+|+|+..++.++++|+.
T Consensus 324 l~~~~~l~~~~~~vN~sGg~~a~GHplgAtG~~~~~~~~~qL~~ 367 (392)
T PRK06633 324 IYVNREMKWDMEKVNINGGAIAIGHPIGASGGRVLITLIHGLRR 367 (392)
T ss_pred HHHHhhhCCCccccCCCCchHhhCCcHHHHHHHHHHHHHHHHHh
Confidence 110 10 016778889999999999999999999999975
No 38
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=99.45 E-value=5.7e-13 Score=118.86 Aligned_cols=112 Identities=21% Similarity=0.310 Sum_probs=87.5
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG 80 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~ 80 (206)
++||++++||++++.|++++.+++++|+|++...+.... ......++++++|+++|++++||||+|.|...+..
T Consensus 250 ~~DGaaavvl~s~~~A~~~~~~~~a~I~g~~~~~~~~~~-----~~~~~~~a~~~al~~Agi~~~Did~~Ei~d~f~~~- 323 (394)
T PLN02644 250 ISDGAAALVLVSGEKALELGLQVIAKIRGYADAAQAPEL-----FTTAPALAIPKALKHAGLEASQVDYYEINEAFSVV- 323 (394)
T ss_pred CCcceEEEEeccHHHHHHCCCCeEEEEEEEEEcCCCCcc-----cchhHHHHHHHHHHHcCCCHHHCCEEEeCcHHHHH-
Confidence 489999999999999999999999999999987653211 11233579999999999999999999987655431
Q ss_pred CHhhhhc-------ceeccccccccccccccchHHHHHHHHHhhh
Q 045789 81 DLREYQA-------LRMNSTKSLIGHLLGASGAAEAVATIKAIQT 118 (206)
Q Consensus 81 D~~E~~a-------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~ 118 (206)
.....+. +++..-+..+||+.+|+|+..+++++.+|+.
T Consensus 324 ~l~~~e~lg~~~~~vN~~GG~l~~Ghp~gasG~~~~~~~~~~l~~ 368 (394)
T PLN02644 324 ALANQKLLGLDPEKVNVHGGAVSLGHPIGCSGARILVTLLGVLRS 368 (394)
T ss_pred HHHHHHHhCCCccccCCCCChHhhCCCHHHHHHHHHHHHHHHHHh
Confidence 1111111 4556666678999999999999999999975
No 39
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=99.44 E-value=4.5e-13 Score=119.70 Aligned_cols=113 Identities=25% Similarity=0.347 Sum_probs=89.7
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG 80 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~ 80 (206)
++||++++||++++.|+++|.+++++|.|++.... .+.+.+.+...+++++|+++|++++|||+||.|...+...
T Consensus 255 ~~DGAaa~vL~s~e~A~~~g~~~~a~I~g~~~~~~-----~p~~~~~~~~~A~~~al~~AGl~~~DID~iei~dafa~~~ 329 (400)
T PRK13359 255 VNDGACALLLASEAAARRHGLKPRARVLGIATAGV-----EPRVMGIGPAPATQKLLARLGMTLDQFDVIELNEAFASQG 329 (400)
T ss_pred ccCceEEEEEecHHHHHHCCCCccEEEEEEEEecC-----CCCccchhHHHHHHHHHHHhCCCHHHcCcCccCcHhHHHH
Confidence 58999999999999999999999999999988632 2344566778999999999999999999999764443210
Q ss_pred CH-hhhhc-----ceecccccc--ccccccccchHHHHHHHHHhhh
Q 045789 81 DL-REYQA-----LRMNSTKSL--IGHLLGASGAAEAVATIKAIQT 118 (206)
Q Consensus 81 D~-~E~~a-----~~v~s~k~~--~Gh~~~asG~~~l~~~~l~l~~ 118 (206)
=. .|... .++...++. +||+.+|+|+..++.++.+|+.
T Consensus 330 l~~~e~lg~~~~~~pvN~~GG~la~GHp~gasG~~~v~e~~~qL~~ 375 (400)
T PRK13359 330 LAVLRELGLADDDARVNPNGGAIALGHPLGASGARLVTTALYQLER 375 (400)
T ss_pred HHHHHHcCCCCCCCCEECCCchhhcCCchhHHHHHHHHHHHHHHhh
Confidence 00 01110 478888886 7999999999999999988864
No 40
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=99.44 E-value=4.4e-13 Score=119.77 Aligned_cols=106 Identities=22% Similarity=0.410 Sum_probs=88.0
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG 80 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~ 80 (206)
++||++++||++++.|+++|.+++++|+|++...+. +...+.+...+++++|+++||+++|||++|.|
T Consensus 256 ~~DGAaa~vl~se~~a~~~g~~~~a~i~g~~~~~~~-----~~~~~~~~~~A~~~al~~Agi~~~did~~ei~------- 323 (399)
T PRK09052 256 TSDGAGAVILVSEKALKQFNLTPLARFVSFAVAGVP-----PEIMGIGPIEAIPAALKQAGLKQDDLDWIELN------- 323 (399)
T ss_pred CCCceEEEEEecHHHHHHCCCCeeEEEEEEEEeccC-----CCccchhHHHHHHHHHHHcCCCHHHcCEEEeC-------
Confidence 589999999999999999999999999999887542 23334566899999999999999999999966
Q ss_pred CHhhhhc-----------ceeccccc--cccccccccchHHHHHHHHHhhh
Q 045789 81 DLREYQA-----------LRMNSTKS--LIGHLLGASGAAEAVATIKAIQT 118 (206)
Q Consensus 81 D~~E~~a-----------~~v~s~k~--~~Gh~~~asG~~~l~~~~l~l~~ 118 (206)
|..+... .++...++ .+||+.+++|+..++.++++|++
T Consensus 324 D~f~~~~l~~~e~lg~~~~~vN~~GG~la~GHp~gasG~~~~~~~~~~L~~ 374 (399)
T PRK09052 324 EAFAAQSLAVIRDLGLDPSKVNPLGGAIALGHPLGATGAIRTATVVHGLRR 374 (399)
T ss_pred cHHHHHHHHHHHHhCCCCcccCCCCchhhcCchHHHHHHHHHHHHHHHHHh
Confidence 4433322 35666666 67999999999999999999976
No 41
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=99.43 E-value=4.8e-13 Score=118.98 Aligned_cols=117 Identities=22% Similarity=0.325 Sum_probs=94.1
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCC-C-CChHHHHHHHHHHHHHcCCCccccccccccCCCCC
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAP-H-PEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTR 78 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~-~-~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~ 78 (206)
++||++++||++++.|+++++++ .+|+|++...+..+.... + +.......+++++|+++||+++|||++|+|++++.
T Consensus 211 ~~dGAaa~vL~s~~~A~~~~~~~-v~I~g~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~aGi~~~did~~e~~d~ft~ 289 (389)
T PRK06064 211 ITDGAAAVILASEEKAKEYTDTP-VWIKASGQASDTIALHDRKDFTTLDAAVVAAEKAYKMAGIEPKDIDVAEVHDCFTI 289 (389)
T ss_pred CCCcceEEEEecHHHHHHhcCCC-eEEEEEEEecCcccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEEecCCCcH
Confidence 58999999999999999987654 599999988776543221 1 23466778999999999999999999999999996
Q ss_pred cCCHhhhhc-----------------------ceecccccc--ccccccccchHHHHHHHHHhhhc
Q 045789 79 LGDLREYQA-----------------------LRMNSTKSL--IGHLLGASGAAEAVATIKAIQTG 119 (206)
Q Consensus 79 ~~D~~E~~a-----------------------~~v~s~k~~--~Gh~~~asG~~~l~~~~l~l~~~ 119 (206)
.+.++.+. ++|....+. .||+.+++|+..++.++.+|+..
T Consensus 290 -~~~~~~e~lgl~~~G~~~~~~~~g~~~~~g~~pvN~~GG~l~~Ghp~~a~G~~~~~e~~~qL~g~ 354 (389)
T PRK06064 290 -AEILAYEDLGFAKKGEGGKLAREGQTYIGGDIPVNPSGGLKAKGHPVGATGVSQAVEIVWQLRGE 354 (389)
T ss_pred -HHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeecCCCCcccCCCCcchhHHHHHHHHHHHHhCC
Confidence 34555444 256555555 69999999999999999999875
No 42
>PRK09051 beta-ketothiolase; Provisional
Probab=99.42 E-value=3.6e-13 Score=120.14 Aligned_cols=112 Identities=24% Similarity=0.351 Sum_probs=88.0
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG 80 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~ 80 (206)
++||++++||++++.|+++|.+++++|+|++...+.. .........+++++|+++||+++|||+||+|.+.+..
T Consensus 251 ~~DGAaa~vl~s~~~a~~~g~~~~~~I~g~~~~~~~~-----~~~~~~~~~a~~~al~~agi~~~did~~ei~d~f~~~- 324 (394)
T PRK09051 251 INDGAAAVVLAEADAAEARGLKPLARLVGYAHAGVDP-----EYMGIGPVPATQKALERAGLTVADLDVIEANEAFAAQ- 324 (394)
T ss_pred CCCceEEEEEecHHHHHHCCCCccEEEEEEEEeccCC-----CcccccHHHHHHHHHHHcCCCHHHcCEEEecCccHHH-
Confidence 5799999999999999999999999999998875422 2334566889999999999999999999999764431
Q ss_pred CHhhhhc-------ceeccccccccccccccchHHHHHHHHHhhh
Q 045789 81 DLREYQA-------LRMNSTKSLIGHLLGASGAAEAVATIKAIQT 118 (206)
Q Consensus 81 D~~E~~a-------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~ 118 (206)
.....+. +++.+-+..+||+.+|+|+..++.++.+|+.
T Consensus 325 ~~~~~e~lg~~~~~vN~~GG~~a~Ghp~gAsG~~~~~~~~~~L~~ 369 (394)
T PRK09051 325 ACAVTRELGLDPAKVNPNGSGISLGHPVGATGAIITVKALYELQR 369 (394)
T ss_pred HHHHHHHhCCCccccCCCccHHHhcchHHHHHHHHHHHHHHHHHh
Confidence 1111111 3334444458999999999999999999975
No 43
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=99.41 E-value=6.4e-13 Score=118.45 Aligned_cols=106 Identities=24% Similarity=0.371 Sum_probs=88.7
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG 80 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~ 80 (206)
++||++++||++++.|++.|.+++++|+|++...+.. ...+.+...+++++|+++||+++|||+||.|
T Consensus 248 ~~DGAaavvl~s~~~A~~~g~~~~~~i~g~~~~~~~~-----~~~~~~~~~a~~~al~~agl~~~did~~ei~------- 315 (391)
T PRK07661 248 MSDGAAAVLLMDREKAESDGLKPLAKFRSFAVAGVPP-----EVMGIGPIAAIPKALKLAGLELSDIGLFELN------- 315 (391)
T ss_pred CCCceEEEEEecHHHHHHCCCCceEEEEEEEEecCCC-----cccchHHHHHHHHHHHHcCCCHHHCCEEEeC-------
Confidence 5899999999999999999999999999999875422 2234467899999999999999999999966
Q ss_pred CHhhhhc-------------ceeccccccccccccccchHHHHHHHHHhhh
Q 045789 81 DLREYQA-------------LRMNSTKSLIGHLLGASGAAEAVATIKAIQT 118 (206)
Q Consensus 81 D~~E~~a-------------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~ 118 (206)
|..+... +++.+-+..+||+.+|+|+..++.++.+|++
T Consensus 316 d~f~~~~l~~~e~lg~~~~~vN~~GG~~a~Ghp~gasG~~~~~el~~qL~~ 366 (391)
T PRK07661 316 EAFASQSIQVIRELGLDEEKVNVNGGAIALGHPLGCTGAKLTLSLIHEMKR 366 (391)
T ss_pred CHHHHHHHHHHHHcCCCCCCCCCCCChHHhCCcHHHHHHHHHHHHHHHHHh
Confidence 4444333 4556667778999999999999999999975
No 44
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase. Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.
Probab=99.40 E-value=1.3e-12 Score=116.84 Aligned_cols=113 Identities=26% Similarity=0.398 Sum_probs=88.7
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG 80 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~ 80 (206)
++||++++||++++.|+++|.+++++|+|++..... +.+.+.+...+++++|+++||+++||||+|.|...+...
T Consensus 255 ~~DGAaa~vl~s~e~A~~~g~~~~~~I~g~~~~~~~-----~~~~~~~~~~a~~~al~~Agl~~~DID~~ei~D~f~~~~ 329 (400)
T TIGR02430 255 VNDGAAALLLASEEAVQRHGLTPRARILAAATAGVE-----PRIMGIGPVPATQKLLARAGLSIDQFDVIELNEAFAAQA 329 (400)
T ss_pred cCCceEEEEEecHHHHHHCCCCccEEEEEEEEecCC-----CccccchHHHHHHHHHHHhCCCHHHCCCcccCcHHHHHH
Confidence 589999999999999999999999999999876532 223445678999999999999999999999664433210
Q ss_pred C-Hhhhhc-----ceecccccc--ccccccccchHHHHHHHHHhhh
Q 045789 81 D-LREYQA-----LRMNSTKSL--IGHLLGASGAAEAVATIKAIQT 118 (206)
Q Consensus 81 D-~~E~~a-----~~v~s~k~~--~Gh~~~asG~~~l~~~~l~l~~ 118 (206)
= ..|... .++...++. +||+.+++|+..++.++.+|+.
T Consensus 330 l~~~e~lG~~~~~~pvN~~GG~la~GHp~gasG~~~~~e~~~qLr~ 375 (400)
T TIGR02430 330 LAVLRELGLADDDARVNPNGGAIALGHPLGASGARLVLTALRQLER 375 (400)
T ss_pred HHHHHHcCCCCCCCeECCCCchHhccChHHHHHHHHHHHHHHHHHh
Confidence 0 001111 478888885 7999999999999999999974
No 45
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=99.38 E-value=9.7e-13 Score=117.60 Aligned_cols=113 Identities=23% Similarity=0.278 Sum_probs=89.1
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG 80 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~ 80 (206)
++||++++||++++.|+++|.+++++|.|++...+.... ...+...+++++|+++|++++|||++|.|...+...
T Consensus 259 ~~DGAaAlvl~s~e~A~~~g~~p~a~I~g~~~~~~~~~~-----~~~~~~~a~~~al~~AGl~~~DID~~ei~daFa~~~ 333 (402)
T PRK08242 259 IVDGAAAVLIGSEEAGKALGLKPRARIVATATIGSDPTI-----MLTGPVPATRKALAKAGLTVDDIDLFELNEAFASVV 333 (402)
T ss_pred CCCceEEEEEecHHHHHHcCCCCcEEEEEEEEecCCchh-----hcccHHHHHHHHHHHcCCCHHHCCEEEecchhhHHH
Confidence 579999999999999999999999999999887553221 123346799999999999999999999886655311
Q ss_pred CH-hhhhc-----ceeccccccccccccccchHHHHHHHHHhhh
Q 045789 81 DL-REYQA-----LRMNSTKSLIGHLLGASGAAEAVATIKAIQT 118 (206)
Q Consensus 81 D~-~E~~a-----~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~ 118 (206)
-. .|... +++.+.+..+||+.+|+|+..++.++.+|++
T Consensus 334 l~~~e~lG~~~~~vN~~GG~la~GHP~GAsG~~~~~~l~~~L~~ 377 (402)
T PRK08242 334 LRFMQALDIPHDKVNVNGGAIAMGHPLGATGAMILGTVLDELER 377 (402)
T ss_pred HHHHHHhCCCCcCCCcCCCHHhcCCcHHHHHHHHHHHHHHHHHh
Confidence 11 01111 5677778889999999999999999999975
No 46
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=99.35 E-value=1.7e-12 Score=115.78 Aligned_cols=112 Identities=19% Similarity=0.239 Sum_probs=90.7
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG 80 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~ 80 (206)
++||++++||++++.|++.|.+++++|+|++...+. +++.+.+...+++++|+++|++++|||++|.|...+..
T Consensus 249 ~~DGAaa~vl~s~~~A~~~g~~~~~~i~g~~~~~~~-----~~~~~~~~~~a~~~al~~agl~~~Did~~ei~eafa~~- 322 (392)
T PRK07108 249 FSDGASACVVMNAKVAEREGLQPLGIFRGFAVAGCE-----PDEMGIGPVFAVPKLLKQAGLKVDDIDLWELNEAFAVQ- 322 (392)
T ss_pred CCCceEEEEEecHHHHHHCCCCceEEEEEEEEeccC-----CcccchhHHHHHHHHHHHcCCCHHHcCchHhhhHHHHH-
Confidence 589999999999999999999999999999887542 23344566899999999999999999999988665432
Q ss_pred CHhhhhc-------ceeccccccccccccccchHHHHHHHHHhhh
Q 045789 81 DLREYQA-------LRMNSTKSLIGHLLGASGAAEAVATIKAIQT 118 (206)
Q Consensus 81 D~~E~~a-------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~ 118 (206)
.....+. +++.+-+..+||+.+++|+.-++.++..|++
T Consensus 323 ~l~~~e~lg~~~~~vN~~GG~~a~GHp~gatG~r~~~~l~~~l~~ 367 (392)
T PRK07108 323 VLYCRDTLGIPMDRLNVNGGAIAVGHPYGVSGARLTGHALIEGKR 367 (392)
T ss_pred HHHHHHhcCCCccccCCCCChHHhCcchhhhHHHHHHHHHHHHHh
Confidence 1111111 5677777889999999999999999999975
No 47
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=99.34 E-value=2.1e-12 Score=115.35 Aligned_cols=112 Identities=22% Similarity=0.322 Sum_probs=89.3
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG 80 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~ 80 (206)
++||++++||++++.|++.|.+++++|.|++...+... ....+...+++++|+++||+++|||++|.|...+..
T Consensus 254 ~~DGAaa~vl~s~~~a~~~~~~p~~~i~g~~~~~~~~~-----~~~~~~~~a~~~al~~agl~~~Did~~ei~d~fa~~- 327 (397)
T PRK06954 254 ISDGAAALVMMRASTAKRLGLAPLARVVGHSTFAQAPS-----KFTTAPVGAIRKLFEKNGWRAAEVDLFEINEAFAVV- 327 (397)
T ss_pred CCCceEEEEEecHHHHHHCCCCceEEEEEEEecccCcc-----cccchHHHHHHHHHHHcCCCHHHCCEEehhhHHHHH-
Confidence 58999999999999999999999999999876533211 112345789999999999999999999999877641
Q ss_pred CHhhhhc-------ceeccccccccccccccchHHHHHHHHHhhh
Q 045789 81 DLREYQA-------LRMNSTKSLIGHLLGASGAAEAVATIKAIQT 118 (206)
Q Consensus 81 D~~E~~a-------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~ 118 (206)
....++. +++.+-+..+||+.+|+|+..++.++.+|+.
T Consensus 328 ~l~~~e~lg~~~~~vN~~GG~~a~Ghp~gasG~~~~~~~~~qL~~ 372 (397)
T PRK06954 328 TMAAMKEHGLPHEKVNVNGGACALGHPIGASGARILVTLIGALRA 372 (397)
T ss_pred HHHHHHHhCCCcccCCcCCChHHhcccHHHHHHHHHHHHHHHHHh
Confidence 1111111 5677788889999999999999999999975
No 48
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=99.33 E-value=7e-12 Score=111.40 Aligned_cols=112 Identities=21% Similarity=0.293 Sum_probs=86.9
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG 80 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~ 80 (206)
++||++++||.+++.|++.+.+++++|.+++...+..... ..+...+++++|+++||+++|||++|.|.+.+..
T Consensus 239 ~~DGaaa~il~s~e~a~~~~~~~~~~i~~~~~~~~~~~~~-----~~~~~~a~~~a~~~agi~~~did~~e~~d~Fa~~- 312 (382)
T PRK07801 239 ISDGASAVLLASERAVKRHGLTPRARIHHLSVRGDDPVFM-----LTAPIPATRYALEKTGLSIDDIDVVEINEAFAPV- 312 (382)
T ss_pred CCCceEEEEEecHHHHHHCCCCccEEEEEEEEecCChHhh-----ccChHHHHHHHHHHcCCCHHHcCEeeecccchHH-
Confidence 4799999999999999999988899999987665421101 1122578999999999999999999999887742
Q ss_pred CHhhhhc-------ceeccccccccccccccchHHHHHHHHHhhh
Q 045789 81 DLREYQA-------LRMNSTKSLIGHLLGASGAAEAVATIKAIQT 118 (206)
Q Consensus 81 D~~E~~a-------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~ 118 (206)
....++. ++...-...+||+.+|+|+..++.++.+|+.
T Consensus 313 ~~~~~e~lG~~~~pvN~~GG~l~~Ghp~gasG~~~~~e~~~qL~~ 357 (382)
T PRK07801 313 VLAWLKETGADPAKVNPNGGAIALGHPLGATGAKLMTTLLHELER 357 (382)
T ss_pred HHHHHHHhCCCchhcCCCcchhhhcCcHHHHHHHHHHHHHHHHHh
Confidence 1122222 4455555567999999999999999999986
No 49
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=99.33 E-value=2e-12 Score=115.76 Aligned_cols=112 Identities=21% Similarity=0.347 Sum_probs=90.1
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG 80 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~ 80 (206)
++||++++||.+++.|++.+.+++++|+|++...+.. .+...+...+++++|++|||+++|||++|.|.+.+..
T Consensus 262 ~~DGaaa~vl~s~e~A~~~~~~~~a~I~g~~~~~~~~-----~~~~~~~~~a~~~al~~Agi~~~did~~ei~d~f~~~- 335 (406)
T PRK07851 262 LNDGAAAVVIMSDTKARELGLTPLARIVSTGVSGLSP-----EIMGLGPVEASKQALARAGMSIDDIDLVEINEAFAAQ- 335 (406)
T ss_pred cCCceeEEEEccHHHHHHcCCCccEEEEEEEEccCCC-----CccchhHHHHHHHHHHHhCCCHHHCCeehhhhHHHHH-
Confidence 5899999999999999999999999999998764421 2233457889999999999999999999988665531
Q ss_pred CHhhhhc-------ceeccccccccccccccchHHHHHHHHHhhh
Q 045789 81 DLREYQA-------LRMNSTKSLIGHLLGASGAAEAVATIKAIQT 118 (206)
Q Consensus 81 D~~E~~a-------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~ 118 (206)
....+++ +++.+.+..+||+.+++|+..++.++.+|++
T Consensus 336 ~l~~le~lg~~~~pvN~~GG~l~~Ghp~gasg~~~~~~~~~qL~~ 380 (406)
T PRK07851 336 VLPSARELGIDEDKLNVSGGAIALGHPFGMTGARITTTLLNNLQT 380 (406)
T ss_pred HHHHHHHhCCCccccCCCCChHhhcCcHHHHHHHHHHHHHHHHHh
Confidence 1121122 4567777778999999999999999999975
No 50
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA. This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.
Probab=99.33 E-value=1.2e-11 Score=110.15 Aligned_cols=112 Identities=21% Similarity=0.312 Sum_probs=83.3
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG 80 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~ 80 (206)
++||++++||++++.|++.+++++++|+|++.+..... ..+.....+++++|+++||+|+||||+|+|...+..
T Consensus 239 ~sDGAaavvL~s~e~A~~~g~~~~a~I~g~~~~~~~~~-----~~~~~~~~a~~~al~~AGi~p~DId~~Ei~daFa~~- 312 (385)
T TIGR02445 239 LSDGASAMLVMSEQRANELGLKPRARIRSMAVAGCDPS-----IMGYGPVPATQKALKRAGLSISDIDVFELNEAFAAQ- 312 (385)
T ss_pred cCCceEEEEEecHHHHHHCCCCeeEEEEEEEEcCCCCc-----ccchhHHHHHHHHHHHcCCCHHHcCEEEEccccHHH-
Confidence 58999999999999999999999999999988743221 112245789999999999999999999999887642
Q ss_pred CHhhhhc----------ceeccccccccccccccchHHHHHHHHHhhh
Q 045789 81 DLREYQA----------LRMNSTKSLIGHLLGASGAAEAVATIKAIQT 118 (206)
Q Consensus 81 D~~E~~a----------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~ 118 (206)
....++. +++..-.-.+||+.+|+|+..++.++..+++
T Consensus 313 ~l~~~e~lg~~~~g~~~vN~~GG~la~GhP~GATG~r~v~~l~~~l~~ 360 (385)
T TIGR02445 313 ALPCLKDLGLLDKMDEKVNLNGGAIALGHPLGCSGARISTTLLNLMEQ 360 (385)
T ss_pred HHHHHHHcCCCCCCCCCcCCCCchhhcCCCccccHHHHHHHHHHHHHh
Confidence 1121121 2222223346999999998888888755543
No 51
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=99.32 E-value=1.4e-11 Score=109.80 Aligned_cols=112 Identities=22% Similarity=0.317 Sum_probs=86.1
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG 80 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~ 80 (206)
++||++++||.+++.|++.+++++++|.|++.+.+... ........+++++|+++|++|+|||++|.|...+..
T Consensus 241 ~sDGAaAvvl~s~~~A~~~g~~p~~~I~g~~~~~~~~~-----~~~~~~~~a~~~al~~Agl~~~DId~~El~d~F~~~- 314 (387)
T PRK08947 241 LSDGASAMLVMSESRAKELGLKPRARIRSMAVAGCDPS-----IMGYGPVPATQKALKRAGLSISDIDVFELNEAFAAQ- 314 (387)
T ss_pred cCCceEEEEEccHHHHHHCCCCccEEEEEEEEcCcCcc-----cccccHHHHHHHHHHHcCCCHHHCCEEEecccchHH-
Confidence 58999999999999999999999999999998743221 112234788999999999999999999999887642
Q ss_pred CHhhhhc----------ceeccccccccccccccchHHHHHHHHHhhh
Q 045789 81 DLREYQA----------LRMNSTKSLIGHLLGASGAAEAVATIKAIQT 118 (206)
Q Consensus 81 D~~E~~a----------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~ 118 (206)
....++. +++..-.-.+||+.+|+|+..++.++.+|+.
T Consensus 315 ~l~~~e~lg~~~~~~~~vN~~GG~la~GhP~GAtG~~~v~~l~~~L~~ 362 (387)
T PRK08947 315 SLPCLKDLGLLDKMDEKVNLNGGAIALGHPLGCSGARISTTLLNLMER 362 (387)
T ss_pred HHHHHHHcCCCCCCCCCcCCCCchhhcCCCccccHHHHHHHHHHHHHh
Confidence 1111111 2333444457999999999999999999975
No 52
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=99.32 E-value=1.2e-11 Score=110.73 Aligned_cols=113 Identities=22% Similarity=0.334 Sum_probs=88.4
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG 80 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~ 80 (206)
++||++++||.+++.|++.+.+++++|.|++...+... ..+.+...+++++|+++||+++|||++|.|...+..
T Consensus 257 ~~DGAaa~vl~se~~A~~~~~~p~~~i~g~~~~~~~~~-----~~~~~~~~a~~~al~~Agl~~~Did~~ei~d~f~~~- 330 (404)
T PRK06205 257 QNDAAAACLVTTEDKAEELGLRPLARLVSWAVAGVEPS-----RMGIGPVPATEKALARAGLTLDDIDLIELNEAFAAQ- 330 (404)
T ss_pred CCCceeEEEEecHHHHHHCCCCceEEEEEEEEeccCCc-----cccccHHHHHHHHHHHcCCCHHHCCEeeeccHHHHH-
Confidence 47999999999999999999999999999988755322 122356889999999999999999999988665431
Q ss_pred CHhhhh----------cceeccccccccccccccchHHHHHHHHHhhhc
Q 045789 81 DLREYQ----------ALRMNSTKSLIGHLLGASGAAEAVATIKAIQTG 119 (206)
Q Consensus 81 D~~E~~----------a~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~ 119 (206)
.....+ -+++.+-+..+||+.+|+|+..++.++.+|+..
T Consensus 331 ~l~~~e~lg~~~~~~~~vN~~GG~la~Ghp~gatG~~~v~e~~~qL~~~ 379 (404)
T PRK06205 331 VLAVLKEWGFGADDEERLNVNGSGISLGHPVGATGGRILATLLRELQRR 379 (404)
T ss_pred HHHHHHHhCcCcccCCCcCCCCCHHhhCCChhhhHHHHHHHHHHHHHhc
Confidence 011111 144555566689999999999999999999863
No 53
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=99.32 E-value=6.8e-12 Score=112.21 Aligned_cols=113 Identities=26% Similarity=0.340 Sum_probs=88.6
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG 80 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~ 80 (206)
++||++++||++++.|++.|.+++++|+|++...+.. ...+.+...+++++|+++||+++|||++|.|...+...
T Consensus 256 ~~DGAaa~vl~s~~~A~~lg~~p~a~I~g~~~~~~~~-----~~~~~~~~~a~~~al~~Agl~~~DId~~ei~D~f~~~~ 330 (401)
T PRK09050 256 VNDGAAALLLASEAAAKKHGLTPRARILGMATAGVEP-----RIMGIGPAPATRKLLARLGLTIDQFDVIELNEAFAAQG 330 (401)
T ss_pred CcCceEEEEEecHHHHHHCCCCccEEEEEEEEeccCC-----ccccchHHHHHHHHHHHcCCCHHHCCccccCcHhHHHH
Confidence 5899999999999999999999999999998875422 22334567899999999999999999999775543210
Q ss_pred C-Hhhhhc-----ceecccccc--ccccccccchHHHHHHHHHhhh
Q 045789 81 D-LREYQA-----LRMNSTKSL--IGHLLGASGAAEAVATIKAIQT 118 (206)
Q Consensus 81 D-~~E~~a-----~~v~s~k~~--~Gh~~~asG~~~l~~~~l~l~~ 118 (206)
= ..|... .++...++. +||+.+++|+..++.++.+|+.
T Consensus 331 l~~~e~lg~~~~~~pvN~~GG~la~Ghp~gasG~~~~~e~~~qLr~ 376 (401)
T PRK09050 331 LAVLRQLGLADDDARVNPNGGAIALGHPLGMSGARLVLTALHQLER 376 (401)
T ss_pred HHHHHHcCCCCCCCCEeCCCchHhcCCchhHHHHHHHHHHHHHHHh
Confidence 0 001111 467888886 7999999999999999999974
No 54
>PLN02287 3-ketoacyl-CoA thiolase
Probab=99.32 E-value=3.6e-12 Score=115.50 Aligned_cols=112 Identities=20% Similarity=0.305 Sum_probs=88.4
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG 80 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~ 80 (206)
++||++++||++++.|++.+.+|++++.++..... .+...+.+..++++++|+++||+++|||++|.|...+...
T Consensus 290 ~sDGAaalvl~see~A~~~~~~~~a~~~~~~~~~~-----~~~~~~~~~~~A~~~al~~Agl~~~DID~~Ei~daFa~~~ 364 (452)
T PLN02287 290 VSDGAGAVLLMKRSVAMQKGLPILGVFRSFAAVGV-----DPAVMGIGPAVAIPAAVKAAGLELDDIDLFEINEAFASQF 364 (452)
T ss_pred cCCceEEEEEeeHHHHHHCCCCeEEEEEEEeeccC-----CCccchHHHHHHHHHHHHHcCCCHHHCCEEEecchHHHHH
Confidence 58999999999999999999999999999874321 1333455678999999999999999999999996655321
Q ss_pred CHhhhhc-------ceeccccccccccccccchHHHHHHHHHhhh
Q 045789 81 DLREYQA-------LRMNSTKSLIGHLLGASGAAEAVATIKAIQT 118 (206)
Q Consensus 81 D~~E~~a-------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~ 118 (206)
...++. +++.+-+..+||+.+|+|+..++.++.+|++
T Consensus 365 -l~~~e~lG~~~~pvN~sGG~la~GHp~gAsG~~~v~~l~~qL~~ 408 (452)
T PLN02287 365 -VYCCKKLGLDPEKVNVNGGAIALGHPLGATGARCVATLLHEMKR 408 (452)
T ss_pred -HHHHHHcCCCccccCCCCcHHhccCcHHHHHHHHHHHHHHHHHh
Confidence 111111 4566666678999999999999999999975
No 55
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=99.30 E-value=6.9e-12 Score=112.17 Aligned_cols=112 Identities=29% Similarity=0.412 Sum_probs=89.3
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG 80 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~ 80 (206)
++||++++||.+++.|++.+.+++++|.|++...+.. ...+.+...+++++|+++||+++|||++|.|...+..
T Consensus 255 ~~DGAaa~vl~s~~~a~~~~~~p~~~i~g~~~~~~~~-----~~~~~~~~~a~~~a~~~agl~~~did~~ei~d~Fa~~- 328 (401)
T PRK08131 255 INDGAAALLIGSRAAGEKYGLKPMARILSSAAAGVEP-----RIMGIGPVEAIKKALARAGLTLDDMDIIEINEAFASQ- 328 (401)
T ss_pred CCCceEEEEEeeHHHHHHcCCCceEEEEEEEEeccCC-----ccccchHHHHHHHHHHHcCCCHHHCCeehhccHHHHH-
Confidence 5899999999999999999999999999998876522 2223456899999999999999999999999777653
Q ss_pred CHhhhhc-------ceeccccc--cccccccccchHHHHHHHHHhhh
Q 045789 81 DLREYQA-------LRMNSTKS--LIGHLLGASGAAEAVATIKAIQT 118 (206)
Q Consensus 81 D~~E~~a-------~~v~s~k~--~~Gh~~~asG~~~l~~~~l~l~~ 118 (206)
.....+. .+|....+ .+||+.+|+|+..++.++.+|+.
T Consensus 329 ~l~~~e~lg~~~~~~~vN~~GG~la~GhP~gAtG~~~~~el~~qL~~ 375 (401)
T PRK08131 329 VLGCLKGLGVDFDDPRVNPNGGAIAVGHPLGASGARLALTAARELQR 375 (401)
T ss_pred HHHHHHHcCCCCCCCCccCCccHHhcCCchhhhHHHHHHHHHHHHHh
Confidence 1111111 35555566 36999999999999999999975
No 56
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=99.30 E-value=4.8e-12 Score=112.89 Aligned_cols=113 Identities=23% Similarity=0.282 Sum_probs=87.4
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG 80 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~ 80 (206)
++||++++||++++.|++.+.+++++|.|++...+.... .......+++++|+++||+++|||++|.|...+...
T Consensus 250 ~~DGAaa~vl~s~~~A~~~~~~p~~~i~g~~~~~~~~~~-----~~~~~~~a~~~al~~agl~~~did~~e~~d~f~~~~ 324 (393)
T PRK08235 250 VNDGAAALVLMSEDRAKQEGRKPLATILAHTAIAVEAKD-----FPRTPGYAINALLEKTGKTVEDIDLFEINEAFAAVA 324 (393)
T ss_pred CCCceEEEEEecHHHHHHCCCCceEEEEEEEecccChhh-----hcchHHHHHHHHHHHhCCCHHHCCeehhcchhHHHH
Confidence 589999999999999999999999999998765432211 112345899999999999999999999886655311
Q ss_pred CH-hhhhc-----ceeccccccccccccccchHHHHHHHHHhhh
Q 045789 81 DL-REYQA-----LRMNSTKSLIGHLLGASGAAEAVATIKAIQT 118 (206)
Q Consensus 81 D~-~E~~a-----~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~ 118 (206)
=. .|... +++.+-+..+||+.+|+|+..++.++.+|+.
T Consensus 325 l~~~e~lg~~~~pvN~~GG~la~Ghp~gasG~~~~~~l~~qL~~ 368 (393)
T PRK08235 325 LASTEIAGIDPEKVNVNGGAVALGHPIGASGARIIVTLIHELKR 368 (393)
T ss_pred HHHHHHhCCCcccCCcCCchHHhCCcHHHHHHHHHHHHHHHHHh
Confidence 00 11111 5667777788999999999999999999975
No 57
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=99.29 E-value=1.5e-11 Score=109.50 Aligned_cols=115 Identities=26% Similarity=0.378 Sum_probs=90.1
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCC-ChHHHHHHHHHHHHHcCCCccccccccccCCCCCc
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHP-EGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRL 79 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~-~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~ 79 (206)
++||++++||.+++.|++.+. +++|+|++...+.......++ ...+...+++++|+++||+|+|||++|.|.+++..
T Consensus 215 ~~DGAaa~il~s~~~a~~~~~--~v~i~g~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~agl~~~did~~e~~d~f~~~ 292 (389)
T PRK07516 215 VSDGAAALVLADAETARALQR--AVRFRARAHVNDFLPLSRRDPLAFEGPRRAWQRALAQAGVTLDDLSFVETHDCFTIA 292 (389)
T ss_pred cCcceEEEEEecHHHHHhcCC--CEEEEEEEeccCcccccCCCccccHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCHH
Confidence 589999999999999988753 678999998877554323232 34667789999999999999999999999999875
Q ss_pred CCHhhhhc-----------------------ceec---cccccccccccccchHHHHHHHHHhhhc
Q 045789 80 GDLREYQA-----------------------LRMN---STKSLIGHLLGASGAAEAVATIKAIQTG 119 (206)
Q Consensus 80 ~D~~E~~a-----------------------~~v~---s~k~~~Gh~~~asG~~~l~~~~l~l~~~ 119 (206)
...+.++ ++|. ..+ .+||+.+|+|+..++.++++|+..
T Consensus 293 -~~~~~e~lg~~~~G~~~~~~~~g~~~~~g~~pvN~sGG~l-a~Ghp~gasG~~~~~e~~~QL~g~ 356 (389)
T PRK07516 293 -ELIEYEAMGLAPPGQGARAIREGWTAKDGKLPVNPSGGLK-AKGHPIGATGVSMHVLAAMQLTGE 356 (389)
T ss_pred -HHHHHHHcCCCCCCchHHHHHCCCccCCCCeeecCCCCcc-cCCCCccHHHHHHHHHHHHHhcCC
Confidence 3333333 2443 233 379999999999999999999864
No 58
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=99.27 E-value=1.6e-11 Score=108.29 Aligned_cols=117 Identities=22% Similarity=0.292 Sum_probs=93.1
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCC--CChHHHHHHHHHHHHHcCCCccccccccccCCCCC
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPH--PEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTR 78 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~--~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~ 78 (206)
++||++++||.+++.|++. .+++++|+|++...+........ ....+...+++++|++|||+++|||++|.|.+.+.
T Consensus 204 ~~DGaaa~vl~s~~~a~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~did~~ei~d~F~~ 282 (375)
T cd00829 204 VSDGAAAVVLASEERAREL-TDRPVWILGVGAASDTPSLSERDDFLSLDAARLAARRAYKMAGITPDDIDVAELYDCFTI 282 (375)
T ss_pred CCCceeEEEEecHHHHhhc-CCCCeEEEEEEEecCCccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEEecCcChH
Confidence 5899999999999999988 67899999999988876543333 25678889999999999999999999999999875
Q ss_pred cCCHhhhhc-----------------------ceecccccc--ccccccccchHHHHHHHHHhhhc
Q 045789 79 LGDLREYQA-----------------------LRMNSTKSL--IGHLLGASGAAEAVATIKAIQTG 119 (206)
Q Consensus 79 ~~D~~E~~a-----------------------~~v~s~k~~--~Gh~~~asG~~~l~~~~l~l~~~ 119 (206)
. ....++. ++|....+. .||+.+++|+..++.++.+|+..
T Consensus 283 ~-~l~~~e~lGl~~~g~~~~~~~~g~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~qlrg~ 347 (375)
T cd00829 283 A-ELLALEDLGFCEKGEGGKLVREGDTAIGGDLPVNTSGGLLSKGHPLGATGLAQAVEAVRQLRGE 347 (375)
T ss_pred H-HHHHHHHcCCCCCCchHHHHHCCCccCCCCccccCCCchhcCCCCccHHHHHHHHHHHHHhcCC
Confidence 3 2222222 245444444 59999999999999999999864
No 59
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=99.26 E-value=2.4e-11 Score=107.99 Aligned_cols=115 Identities=18% Similarity=0.174 Sum_probs=89.5
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCC-CCCCh-HHHHHHHHHHHHHcCCCccccccccccCCCCC
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITA-PHPEG-VGMVSCMEKALAKSGVAKEDVNYINAHAPSTR 78 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~-~~~~~-~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~ 78 (206)
++||++++||.+++.|++.+.+++++|+|++...+...... ++... .....+++++|+++|++++|||++|.|.+++.
T Consensus 209 ~~DGAaA~vl~s~e~A~~l~~~~~~~I~g~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~DiD~~ei~d~ft~ 288 (385)
T PRK12578 209 ISDGSATAIFASEEKVKELKIDSPVWITGIGYANDYAYVARRGEWVGFKATQLAARQAYNMAKVTPNDIEVATVHDAFTI 288 (385)
T ss_pred cCCCeEEEEEecHHHHHhcCCCCCeEEEEEEEecCcccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEEecCcChH
Confidence 47999999999999999888667899999998776543221 12222 35678999999999999999999999999884
Q ss_pred cCCHhhhhc--------------------------ceecccccc--ccccccccchHHHHHHHHHhhhc
Q 045789 79 LGDLREYQA--------------------------LRMNSTKSL--IGHLLGASGAAEAVATIKAIQTG 119 (206)
Q Consensus 79 ~~D~~E~~a--------------------------~~v~s~k~~--~Gh~~~asG~~~l~~~~l~l~~~ 119 (206)
.|..+ ++|...-+. .||+.+|+|+..++.++.+|+..
T Consensus 289 ----~~l~~le~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~GG~la~GhP~gatG~~~v~e~~~qLrg~ 353 (385)
T PRK12578 289 ----AEIMGYEDLGFTEKGKGGKFIEEGQSEKGGKVGVNLFGGLKAKGHPLGATGLSMIYEITKQLRDE 353 (385)
T ss_pred ----HHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeeCCCCCcccCCCCccHHHHHHHHHHHHHHhCC
Confidence 33332 244333333 59999999999999999999853
No 60
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=99.25 E-value=2.3e-11 Score=108.92 Aligned_cols=113 Identities=22% Similarity=0.279 Sum_probs=88.0
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG 80 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~ 80 (206)
++||++++||++++.|++.|.+++++|.|++...+.... .+.+...+++++|+++|++++|||++|.|...+...
T Consensus 274 ~sDGAAAvVL~See~A~~lg~~p~a~I~g~~~a~~~p~~-----~~~~p~~Ai~~aL~~AGl~~~DID~~ei~eaFa~~~ 348 (417)
T PRK06025 274 VVDGAAALLLASKAYAEKHGLKPRARIVAMANMGDDPTL-----MLNAPVPAAKKVLAKAGLTKDDIDLWEINEAFAVVA 348 (417)
T ss_pred CCcceEEEEEecHHHHHHcCCCCcEEEEEEEEecCCchh-----hcccHHHHHHHHHHHcCCCHHHCcEEEEchHHHHHH
Confidence 489999999999999999999999999999887553221 122346899999999999999999999886654321
Q ss_pred CHh-hhhc-----ceeccccccccccccccchHHHHHHHHHhhh
Q 045789 81 DLR-EYQA-----LRMNSTKSLIGHLLGASGAAEAVATIKAIQT 118 (206)
Q Consensus 81 D~~-E~~a-----~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~ 118 (206)
... |... +++..-+..+||+.+++|+..++.++..|+.
T Consensus 349 l~~~~~lg~~~~~vN~~GG~ia~GHp~GaTGa~~v~~ll~qL~~ 392 (417)
T PRK06025 349 EKFIRDLDLDRDKVNVNGGAIALGHPIGATGSILIGTVLDELER 392 (417)
T ss_pred HHHHHHcCCChhhccccCCHHhcCCchhHHHHHHHHHHHHHHHH
Confidence 111 0000 5566666778999999999999999999865
No 61
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=99.19 E-value=6.8e-11 Score=105.37 Aligned_cols=112 Identities=21% Similarity=0.289 Sum_probs=86.7
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG 80 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~ 80 (206)
++||++++||.+++.|++.+.++.++|.|++...+.. .....+...+++++|+++|++++|||++|.|...+..
T Consensus 244 ~sDGAaa~vl~see~A~~l~~~p~~~i~g~~~~~~~~-----~~~~~~~~~a~~~al~~agl~~~did~~ei~d~F~~~- 317 (387)
T PRK07850 244 ISDGAAAVLWMDEDRARALGLRPRARIVAQALVGAEP-----YYHLDGPVQATAKVLEKAGMKIGDIDLVEINEAFASV- 317 (387)
T ss_pred cCCceEEEEEecHHHHHHcCCCCcEEEEEEEEeccCc-----hhhcchHHHHHHHHHHHcCCCHHHcCeeeecccchHH-
Confidence 5899999999999999999988899999998643221 1123455789999999999999999999999887643
Q ss_pred CHhhhhc-------ceeccccccccccccccchHHHHHHHHHhhh
Q 045789 81 DLREYQA-------LRMNSTKSLIGHLLGASGAAEAVATIKAIQT 118 (206)
Q Consensus 81 D~~E~~a-------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~ 118 (206)
.....+. +++..-.-.+||+.+++|+..++.++.+|+.
T Consensus 318 ~l~~~e~lg~~~~pvN~~GG~la~Ghp~gatG~~~v~e~~~qL~~ 362 (387)
T PRK07850 318 VLSWAQVHEPDMDKVNVNGGAIALGHPVGSTGARLITTALHELER 362 (387)
T ss_pred HHHHHHHcCCCCCCcCCCCchhhcCCCcchhHHHHHHHHHHHHHh
Confidence 1111111 3344444457999999999999999999975
No 62
>PRK06158 thiolase; Provisional
Probab=99.18 E-value=8.9e-11 Score=104.45 Aligned_cols=115 Identities=15% Similarity=0.192 Sum_probs=84.8
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCC-CCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCc
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHIT-APHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRL 79 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~-~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~ 79 (206)
++||++++||.+++.|++.++++ ..|.|++...+..... .++.......++++++|++|||+|+|||++|.|.+.+..
T Consensus 208 ~~DGAaAvVL~s~e~A~~l~~~~-v~i~g~~~~~~~~~~~~~~~~~~~~~~~aa~~A~~~AGi~p~DId~~ElyD~Fs~~ 286 (384)
T PRK06158 208 VTDGAGAVVMVRADRARDLPRPP-VYVLGAAAATWHRQISSMPDLTVTAAAESGPRAFAMAGLTPADIDVVELYDAFTIN 286 (384)
T ss_pred ccCCeEEEEEecHHHHhhcCCCc-EEEEEEEEecCCcccccccchhhhHHHHHHHHHHHHcCCCHHHCcEEEecCCchHH
Confidence 48999999999999998876553 6688887766543321 122234556789999999999999999999999998752
Q ss_pred CCHhhhhc-----------------------ceecccccc--ccccccccchHHHHHHHHHhhh
Q 045789 80 GDLREYQA-----------------------LRMNSTKSL--IGHLLGASGAAEAVATIKAIQT 118 (206)
Q Consensus 80 ~D~~E~~a-----------------------~~v~s~k~~--~Gh~~~asG~~~l~~~~l~l~~ 118 (206)
..+.+++ +|+...-+. .||+ +++|+..++.++++|+.
T Consensus 287 -~l~~~E~lG~~~~Ge~~~~~~~G~~~~~G~~PvN~sGG~ls~Ghp-gatG~~~~~E~~~QLrg 348 (384)
T PRK06158 287 -TILFLEDLGFCAKGEGGAFVEGGRIAPGGRLPVNTNGGGLSCVHP-GMYGLFLLIEAVRQLRG 348 (384)
T ss_pred -HHHHHHHcCCCCCCcHHHHHHCCCCccCCCccccCCChhhcCCCC-chhhHHHHHHHHHHHcC
Confidence 2222222 344333333 4999 99999999999999975
No 63
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=99.15 E-value=8.5e-11 Score=104.76 Aligned_cols=112 Identities=17% Similarity=0.191 Sum_probs=84.5
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG 80 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~ 80 (206)
++||++++||.+++.|++.+.++.++|+|++......... ......+.+++|+++||+++|||++|.|...+..
T Consensus 244 ~sDGAaAvvl~See~A~~l~~~pv~~I~g~~~~~~~~~~~-----~~~~~~A~~~al~~Agl~~~DiDv~Ei~daFa~~- 317 (388)
T PRK06366 244 LSDGGSALVMASEKAINEYGLKPIARITGYESASLDPLDF-----VEAPIPATRKLLEKQNKSIDYYDLVEHNEAFSIA- 317 (388)
T ss_pred cccceeEEEEecHHHHHHcCCCcCEEEEEEEEEecCHHHh-----cccHHHHHHHHHHHcCCCHHHcceeeccchhHHH-
Confidence 4799999999999999998988888999998775422111 1123689999999999999999999999887752
Q ss_pred CHhhhhcceec-------cccccccccccccchHHHHHHHHHhhh
Q 045789 81 DLREYQALRMN-------STKSLIGHLLGASGAAEAVATIKAIQT 118 (206)
Q Consensus 81 D~~E~~a~~v~-------s~k~~~Gh~~~asG~~~l~~~~l~l~~ 118 (206)
....++++.+. .---.+||+.+|+|+..++.++.+|+.
T Consensus 318 ~l~~le~lgl~g~~vN~~GG~la~GHP~GatG~~~~~~l~~qL~~ 362 (388)
T PRK06366 318 SIIVRDQLKIDNERFNVNGGAVAIGHPIGNSGSRIIVTLINALKT 362 (388)
T ss_pred HHHHHHHhCCCCCccCCCCchhhhCCCcCCCHHHHHHHHHHHHHh
Confidence 22222222222 111226999999999999999999975
No 64
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=99.13 E-value=4.3e-10 Score=100.33 Aligned_cols=112 Identities=21% Similarity=0.261 Sum_probs=84.6
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG 80 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~ 80 (206)
++||++++||.+++.|++.+.++..+|.++....+.. .........+++++|+++|++++|||++|.|...+..
T Consensus 247 ~~DGAaA~vl~s~~~A~~l~~~p~~~i~~~~~~~~~~-----~~~~~~~~~a~~~a~~~agl~~~Did~~Ei~d~Fa~~- 320 (390)
T PRK06504 247 ICDGASGVMVVNERGLKALGVKPLARIHHMTVIGGDP-----VIMLEAPLPATERALKKAGMKIDDIDLYEVNEAFASV- 320 (390)
T ss_pred CCCceEEEEEecHHHHHHcCCCceEEEEEEEEeecCc-----hhhhccHHHHHHHHHHHcCCCHHHCCEEEecccchHH-
Confidence 4799999999999999998888877888877654321 1112344679999999999999999999999887753
Q ss_pred CHhhhhc-------ceeccccccccccccccchHHHHHHHHHhhh
Q 045789 81 DLREYQA-------LRMNSTKSLIGHLLGASGAAEAVATIKAIQT 118 (206)
Q Consensus 81 D~~E~~a-------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~ 118 (206)
.....+. +++..-.-.+||+.+|+|+..+...+.+|+.
T Consensus 321 ~l~~~e~lG~~~~pvN~~GG~la~Ghp~gatG~r~~~~l~~~lr~ 365 (390)
T PRK06504 321 PLAWLKATGADPERLNVNGGAIALGHPLGASGTKLMTTLVHALKQ 365 (390)
T ss_pred HHHHHHHhCCCCCCcCCCCcHHhcCCCcchhHHHHHHHHHHHHHh
Confidence 1222222 3344444457999999999999999988875
No 65
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=99.12 E-value=2.3e-10 Score=101.95 Aligned_cols=116 Identities=16% Similarity=0.192 Sum_probs=87.2
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG 80 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~ 80 (206)
++||++++||.+++.|++.+ ++..+|+|++...+......++........+++++|++||++++|||++|.|.+.+..
T Consensus 210 ~~DGAaA~vl~s~~~A~~l~-~~~v~I~g~~~~~~~~~~~~~~~~~~~~~~aa~~a~~~AGi~~~did~~elyD~Fs~~- 287 (388)
T PRK08142 210 VTDGGGALVVVRPEIARSLK-RPLVKVLGAGEAIKGQMGGKVDLTYSGAAWSGPAAFAEAGVTPADIKYASIYDSFTIT- 287 (388)
T ss_pred ccCceEEEEEecHHHHhhcC-CCCEEEEEEEEecCCccccCcccccHHHHHHHHHHHHHcCCCHHHCCEEEEeccchHH-
Confidence 47999999999999998876 4568899998877654322333334556789999999999999999999999987753
Q ss_pred CHhhhhc------------------------ceecccccc--ccccccccchHHHHHHHHHhhh
Q 045789 81 DLREYQA------------------------LRMNSTKSL--IGHLLGASGAAEAVATIKAIQT 118 (206)
Q Consensus 81 D~~E~~a------------------------~~v~s~k~~--~Gh~~~asG~~~l~~~~l~l~~ 118 (206)
..+.+++ +|+...-+. .||+.+|+|+..++.++.+|+.
T Consensus 288 ~~~~~E~lGl~~~Ge~~~~v~~g~~~~~~G~lPvN~sGG~l~~G~p~gatG~~~~~E~~~QLrG 351 (388)
T PRK08142 288 VLMQLEDLGFCKKGEGGKFVADGNLISGVGKLPFNTDGGGLCNNHPANRGGMTKVIEAVRQLRG 351 (388)
T ss_pred HHHHHHHcCCCCCCchHHHHHCCCcccCCCCccccCCChhhcCCCcCcccHHHHHHHHHHHHcC
Confidence 2222222 334222222 4899999999999999999975
No 66
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=99.12 E-value=1.5e-10 Score=102.20 Aligned_cols=112 Identities=21% Similarity=0.249 Sum_probs=86.4
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG 80 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~ 80 (206)
++||++++||.+++.|++.|.++.++|.+++...... .....+...+++++|+++|++++|||++|.|.+.+...
T Consensus 217 ~~DGAaAvvl~s~e~A~~lg~~p~~~i~~~~~~~~~~-----~~~~~~~~~a~~~al~~Agl~~~Did~~ei~eafa~~~ 291 (361)
T PRK06690 217 VNDGACAVLVMEEGQARKLGYKPVLRFVRSAVVGVDP-----NLPGTGPIFAVNKLLNEMNMKVEDIDYFEINEAFASKV 291 (361)
T ss_pred CCCCeEEEEEecHHHHHHcCCCceEEEEEEEEeccCc-----ccchhHHHHHHHHHHHHcCCCHHHcCEeeecchhHHHH
Confidence 4899999999999999999988888999988654321 11245678899999999999999999999997766533
Q ss_pred CHhhhhc-------ceeccccccccccccccchHHHHHHHHHhhh
Q 045789 81 DLREYQA-------LRMNSTKSLIGHLLGASGAAEAVATIKAIQT 118 (206)
Q Consensus 81 D~~E~~a-------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~ 118 (206)
... .+. +++..-.-.+||+.+++|+..++.++.++++
T Consensus 292 ~~~-~e~lgl~~~~vn~~GG~la~Ghp~GatG~~~~~~~~~ql~~ 335 (361)
T PRK06690 292 VAC-AKELQIPYEKLNVNGGAIALGHPYGASGAMLVTRLFYQAKR 335 (361)
T ss_pred HHH-HHhcCCCchhcccCCcHHhccCchhhhHHHHHHHHHHHHHH
Confidence 322 111 2333334446999999999999999988865
No 67
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=99.10 E-value=2.2e-10 Score=103.39 Aligned_cols=113 Identities=20% Similarity=0.265 Sum_probs=84.7
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG 80 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~ 80 (206)
++||++++||.+++.|++.+.+++++|.+++....... .+ .......+++++|+++||+++|||++|.|.+.+..
T Consensus 267 ~~DGAaA~vl~see~A~~l~~~p~~~i~g~~~~~~~~~---~~-~~~~~~~a~~~al~~AGl~~~DiD~~Ei~d~Fa~~- 341 (428)
T PRK08963 267 LTDGAAAVLLMSESRAKALGLTPLGYLRSYAFAAIDVW---QD-MLLGPAYATPLALERAGLTLADLTLIDMHEAFAAQ- 341 (428)
T ss_pred CCCceEEEEEecHHHHHHcCCCccEEEEEEecccCCch---hh-hhhHHHHHHHHHHHHcCCCHHHCCEEEEccccHHH-
Confidence 48999999999999999999999999999887542110 00 12334678999999999999999999999988743
Q ss_pred CHhhhh-------------------cc---eecccccc--ccccccccchHHHHHHHHHhhh
Q 045789 81 DLREYQ-------------------AL---RMNSTKSL--IGHLLGASGAAEAVATIKAIQT 118 (206)
Q Consensus 81 D~~E~~-------------------a~---~v~s~k~~--~Gh~~~asG~~~l~~~~l~l~~ 118 (206)
...+++ .+ +|...-+. .||+.+++|+..++.++.+|+.
T Consensus 342 ~l~~~e~l~~~~~~~~~~g~~~~~G~~~~~pvN~~GG~la~GhP~gasG~~~~~e~~~qLrg 403 (428)
T PRK08963 342 TLANLQMFASERFAREKLGRSQAIGEVDMSKFNVLGGSIAYGHPFAATGARMITQTLHELRR 403 (428)
T ss_pred HHHHHHHhcCchhhhhcccccccCCCCCCCccCCCCCHHhcCCCccccHHHHHHHHHHHHhh
Confidence 001000 02 34333333 5999999999999999999975
No 68
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=99.09 E-value=4.7e-10 Score=100.38 Aligned_cols=118 Identities=18% Similarity=0.193 Sum_probs=87.3
Q ss_pred CCceEEEEEEccchHHHhcCC-ceeEEEEEEEecCCCCCCC------CCCC-ChHHHHHHHHHHHHHcCCCccccccccc
Q 045789 1 MGEGAGVLLLEELEHAKKRGT-NIYAEILDGSLTCDAYHIT------APHP-EGVGMVSCMEKALAKSGVAKEDVNYINA 72 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~-~i~a~I~g~~~~~dg~~~~------~~~~-~~~~~~~~~~~al~~Agi~~~dI~~ve~ 72 (206)
++||++++||.+++.|++.+. ++.++|+|++...+..... ..++ .......+.+++|++|||+++|||++|.
T Consensus 222 ~~DGAaA~vl~s~e~a~~l~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~a~~~Agi~~~Didv~el 301 (403)
T PRK06289 222 VTDGGAGVVLASDAYLRDYADARPIPRIKGWGHRTAPLGLEQKLDRSAGDPYVLPHVRQAVLDAYRRAGVGLDDLDGFEV 301 (403)
T ss_pred CCCceeEEEEEcHHHHHHhccCCCCEEEEEEEEeccccccccccccccccccccHHHHHHHHHHHHHcCCCHHHCeEEee
Confidence 479999999999999988775 6778999998765532211 1111 2233567999999999999999999999
Q ss_pred cCCCCCcCCHhhhhc-----------------------ceecccccc--ccccccccchHHHHHHHHHhhhc
Q 045789 73 HAPSTRLGDLREYQA-----------------------LRMNSTKSL--IGHLLGASGAAEAVATIKAIQTG 119 (206)
Q Consensus 73 hgtgt~~~D~~E~~a-----------------------~~v~s~k~~--~Gh~~~asG~~~l~~~~l~l~~~ 119 (206)
|...+.. ..+.+++ +++...-+. .||+.+++|+..++.++.+|+..
T Consensus 302 ~D~fa~~-~l~~le~lGl~~~Ge~~~~v~~G~~~~~G~lpvN~~GG~la~Ghp~gatG~~~~~e~~~QLrg~ 372 (403)
T PRK06289 302 HDCFTPS-EYLAIDHIGLTGPGESWKAIENGEIAIGGRLPINPSGGLIGGGHPVGASGVRMLLDAAKQVTGT 372 (403)
T ss_pred eccchHH-HHHHHHHcCCCCCCcHHHHHhcCCcccCCCeeEcCCCCccccCCCccchHHHHHHHHHHHHhcc
Confidence 9987752 2222222 345444443 49999999999999999999863
No 69
>PRK08256 lipid-transfer protein; Provisional
Probab=99.07 E-value=6.9e-10 Score=98.92 Aligned_cols=118 Identities=22% Similarity=0.268 Sum_probs=87.6
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCC-C---C-ChHHHHHHHHHHHHHcCCCccccccccccCC
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAP-H---P-EGVGMVSCMEKALAKSGVAKEDVNYINAHAP 75 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~-~---~-~~~~~~~~~~~al~~Agi~~~dI~~ve~hgt 75 (206)
++||++++||.+++.|++.+.+++++|.|++...+....... + . .......+.+++|+++|++++|||++|+|.+
T Consensus 213 ~~DGAaA~il~s~~~a~~~~~~~~v~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~ag~~~~DiD~~ei~d~ 292 (391)
T PRK08256 213 PTCGAAAAIVCSEEFARKHGLDRAVEIVAQAMTTDTPSTFDGRSMIDLVGYDMTRAAAQQVYEQAGIGPEDIDVVELHDC 292 (391)
T ss_pred CCCCeEEEEEecHHHHHhcCCCCCEEEEEEEEeccccccccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEeeccC
Confidence 479999999999999988776788999998876653321111 1 1 1234568999999999999999999999998
Q ss_pred CCCcCCHhhhhc-----------------------ceecccccc--ccccccccchHHHHHHHHHhhhc
Q 045789 76 STRLGDLREYQA-----------------------LRMNSTKSL--IGHLLGASGAAEAVATIKAIQTG 119 (206)
Q Consensus 76 gt~~~D~~E~~a-----------------------~~v~s~k~~--~Gh~~~asG~~~l~~~~l~l~~~ 119 (206)
.+.. ....+++ ++|...-+. .||+.+|+|+..++.++++|+..
T Consensus 293 f~~~-~l~~le~lg~~~~Ge~~~~~~~G~~~~~G~~pvN~~GG~ls~Ghp~gasG~~~~~e~~~QL~g~ 360 (391)
T PRK08256 293 FSAN-ELLTYEALGLCPEGEAEKFIDDGDNTYGGRWVVNPSGGLLSKGHPLGATGLAQCAELTWQLRGT 360 (391)
T ss_pred CcHH-HHHHHHHcCCCCCCchHHHHHCCCccCCCCeeeCCCCccccCCCCccHHHHHHHHHHHHHhcCC
Confidence 7752 1222222 355444443 59999999999999999999753
No 70
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=99.06 E-value=7.7e-10 Score=98.55 Aligned_cols=118 Identities=12% Similarity=0.165 Sum_probs=88.5
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCC-CCCCChHHHHHHHHHHHHHcCCC--ccccccccccCCCC
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHIT-APHPEGVGMVSCMEKALAKSGVA--KEDVNYINAHAPST 77 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~-~~~~~~~~~~~~~~~al~~Agi~--~~dI~~ve~hgtgt 77 (206)
++||++++||.+.+.|++.+.++..+|+|++...|..... ...........+++++|+++|++ ++|||++|.|.+.+
T Consensus 208 ~~DGAaAvvl~s~e~a~~l~~~~~~~I~g~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~Agi~~p~~Did~~el~d~F~ 287 (386)
T PRK08313 208 SSDGACAVVIGDEEAADAAAGRPVAWIHGTAMRTEPLAFAGRDQVNPQAGRDAAAALWKAAGITDPRDEIDVAEIYVPFS 287 (386)
T ss_pred CCCceEEEEEecHHHHHhcCCCCCeEEEEEEEEecCcccccccccccHHHHHHHHHHHHHcCCCCChhhCCEEEeccCCh
Confidence 4799999999999999987778888999998776543211 11223466778999999999998 69999999999977
Q ss_pred CcCCHhhhhc-----------------------ceeccccccc-cccccccchHHHHHHHHHhhhc
Q 045789 78 RLGDLREYQA-----------------------LRMNSTKSLI-GHLLGASGAAEAVATIKAIQTG 119 (206)
Q Consensus 78 ~~~D~~E~~a-----------------------~~v~s~k~~~-Gh~~~asG~~~l~~~~l~l~~~ 119 (206)
... .+.+++ ++|...-+.+ ||+.+++|+..++.++++|+..
T Consensus 288 ~~~-~~~~e~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~GG~l~g~p~gatG~~~~~e~~~qlrG~ 352 (386)
T PRK08313 288 WFE-PMWLENLGFAPEGEGWKLTEAGETAIGGRLPVNPSGGVLSSNPIGASGMIRFAEAALQVMGK 352 (386)
T ss_pred HHH-HHHHHHcCCCCCCchHHHHHCCCcCCCCCccccCCCcccccCCCcHHHHHHHHHHHHHhccc
Confidence 521 111111 3553333333 9999999999999999999753
No 71
>KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=99.05 E-value=1.3e-10 Score=99.17 Aligned_cols=113 Identities=22% Similarity=0.258 Sum_probs=84.3
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG 80 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~ 80 (206)
+.||++++||.+.+.+.+.|.+++|+|++|+-........... ..-++.++|++||+..+||+|+|.+....-..
T Consensus 253 lnDGAAAvvL~s~e~~~~~glkPLArIv~~~dAa~~P~df~ia-----P~laipk~lk~aG~~~sdVd~~EiNEAFs~v~ 327 (396)
T KOG1390|consen 253 LNDGAAAVVLMSGEAAKELGLKPLARIVAWGDAATEPIDFTIA-----PALAIPKALKKAGLEQSDVDYWEINEAFSVVV 327 (396)
T ss_pred cCccceeeEEechhhHhHcCCchHHHHhhhhhhccChhhcccc-----hHHHHHHHHHHcCcchhhhhHHhhhhhhhHHH
Confidence 5799999999999999999999999999997654333222233 37789999999999999999999764333211
Q ss_pred CHh--hhhc----ceeccccccccccccccchHHHHHHHHHhhh
Q 045789 81 DLR--EYQA----LRMNSTKSLIGHLLGASGAAEAVATIKAIQT 118 (206)
Q Consensus 81 D~~--E~~a----~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~ 118 (206)
-.. ++.- +.+..-.-.+||+.++||..-+...+..|+.
T Consensus 328 lA~iK~LgldP~kVNv~GGAValGHPlG~SGaRi~~tL~~~L~~ 371 (396)
T KOG1390|consen 328 LANIKKLGLDPSKVNVHGGAVALGHPLGMSGARILVTLLHTLEQ 371 (396)
T ss_pred HHHHHHhCCCHhhccCCCceeecCCCcCCcchhHHHHHHHHHHh
Confidence 110 0000 4444444458999999999999999998876
No 72
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=99.05 E-value=8e-10 Score=99.95 Aligned_cols=116 Identities=22% Similarity=0.274 Sum_probs=84.8
Q ss_pred CCceEEEEEEccchHHHhcCCce----eEEEEEEEecCCCCCCCC--CCCChHHHHHHHHHHHHHcCCCccccccccccC
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNI----YAEILDGSLTCDAYHITA--PHPEGVGMVSCMEKALAKSGVAKEDVNYINAHA 74 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i----~a~I~g~~~~~dg~~~~~--~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hg 74 (206)
++||++++||.+++.|++.+.++ .++|++++...+...... ....+.. ..+++++|+++|++++|||++|.|.
T Consensus 258 ~sDGAaA~vl~See~A~~l~~~p~~~~~v~i~g~~~~~~~~~~~~~~~~~~~~~-~~A~~~a~~~AGl~~~DiD~~Ei~d 336 (438)
T PTZ00455 258 VSDGGAGLVLASEEGLQKMGLSPNDSRLVEIKSLACASGNLYEDPPDATRMFTS-RAAAQKALSMAGVKPSDLQVAEVHD 336 (438)
T ss_pred ccccceEEEEecHHHHHhcCCCCCCCccEEEEEEEEecCCcccCccccccchHH-HHHHHHHHHHcCCCHHHCcEeeecc
Confidence 47999999999999999988776 689999988765321101 0111222 6899999999999999999999998
Q ss_pred CCCCcCCHhhhhc-----------------------ceeccccc--cccccccccchHHHHHHHHHhhh
Q 045789 75 PSTRLGDLREYQA-----------------------LRMNSTKS--LIGHLLGASGAAEAVATIKAIQT 118 (206)
Q Consensus 75 tgt~~~D~~E~~a-----------------------~~v~s~k~--~~Gh~~~asG~~~l~~~~l~l~~ 118 (206)
+.+.. ....++. ++|...-+ .+||+.+|+|+..++.++.+|+.
T Consensus 337 aFa~~-~l~~~e~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~GG~la~GHP~gAtG~~~v~e~~~QLrg 404 (438)
T PTZ00455 337 CFTIA-ELLMYEALGIAEYGHAKDLIRNGATALEGRIPVNTGGGLLSFGHPVGATGVKQIMEVYRQMKG 404 (438)
T ss_pred cChHH-HHHHHHHcCCCCCCchHHHHhcCCcccCCCceeeCCCchhhcCCCcchHHHHHHHHHHHHHhh
Confidence 87742 1111111 23322222 35999999999999999999975
No 73
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=99.05 E-value=4.4e-10 Score=101.31 Aligned_cols=113 Identities=26% Similarity=0.329 Sum_probs=84.5
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG 80 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~ 80 (206)
++||++++||.+++.|++.+.++.++|.+++....... ..+.+...+++++|+++||+++|||++|.|...+...
T Consensus 266 ~~DGAaA~vl~s~e~A~~~~~~p~~~i~~~~~~~~~~~-----~~~~~~~~a~~~al~~aGl~~~did~~ei~daFa~~~ 340 (426)
T PRK08170 266 ITDGACWLLLASEEAVKKYGLPPLGRIVDSQWAALDPS-----QMGLGPVHAATPLLQRHGLTLEDLDLWEINEAFAAQV 340 (426)
T ss_pred CCCceEEEEEecHHHHHHCCCCceEEEEEeeEeeeCch-----hhcccHHHHHHHHHHHcCCCHHHcCEEEecchhHHHH
Confidence 48999999999999999999888889999876543221 1223456899999999999999999999998877421
Q ss_pred C--Hhhhh-------------------cceecccccc--ccccccccchHHHHHHHHHhhh
Q 045789 81 D--LREYQ-------------------ALRMNSTKSL--IGHLLGASGAAEAVATIKAIQT 118 (206)
Q Consensus 81 D--~~E~~-------------------a~~v~s~k~~--~Gh~~~asG~~~l~~~~l~l~~ 118 (206)
= ..+++ -.+|...-+. +||+.+|+|+..+..++.+|++
T Consensus 341 l~~l~~le~lGf~~~G~g~~~~~G~~~~~pvN~~GG~la~GHP~GAtG~~~~~~l~~~l~~ 401 (426)
T PRK08170 341 LACLAAWADEEYCREQLGLDGALGELDRERLNVDGGAIALGHPVGASGARIVLHLLHALKR 401 (426)
T ss_pred HHHHHHhccccchhcccccccccCCCCcceecCCCCHHHhCCCccCccHHHHHHHHHHHHh
Confidence 1 01111 0234333333 5999999999999999988865
No 74
>PRK06059 lipid-transfer protein; Provisional
Probab=99.03 E-value=3.3e-09 Score=94.78 Aligned_cols=117 Identities=22% Similarity=0.317 Sum_probs=84.0
Q ss_pred CCceEEEEEEccchHHHhc--CCceeEEEEEEEecCCCCC--------CC------CCCCChHHHHHHHHHHHHHcCCCc
Q 045789 1 MGEGAGVLLLEELEHAKKR--GTNIYAEILDGSLTCDAYH--------IT------APHPEGVGMVSCMEKALAKSGVAK 64 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~--g~~i~a~I~g~~~~~dg~~--------~~------~~~~~~~~~~~~~~~al~~Agi~~ 64 (206)
++||++++||.+++.|++. +.+..++|++++...+... .. .+.++......+.+++|+++|+++
T Consensus 211 ~~DGAaA~vl~s~~~A~~l~~~~~~~v~I~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~a~~~a~~~agl~~ 290 (399)
T PRK06059 211 TSDGAAALIVASKSFARRHLGSVAGVPSVRAISTVTPRYPQHLPELPDIATDSTAAVPAPERVFKDQILDAAYAEAGIGP 290 (399)
T ss_pred CCCceEEEEEecHHHHHhhccccCCceEEEEEEEecccccccccccccccccccccccccccHHHHHHHHHHHHHcCCCH
Confidence 4799999999999999887 6667789999876543221 00 111122224578999999999999
Q ss_pred cccccccccCCCCCcCCHhhhhc-----------------------ceecccccc--ccccccccchHHHHHHHHHhhh
Q 045789 65 EDVNYINAHAPSTRLGDLREYQA-----------------------LRMNSTKSL--IGHLLGASGAAEAVATIKAIQT 118 (206)
Q Consensus 65 ~dI~~ve~hgtgt~~~D~~E~~a-----------------------~~v~s~k~~--~Gh~~~asG~~~l~~~~l~l~~ 118 (206)
+|||++|.|.+.+.. ....++. ++|...-+. .||+.+++|+..++.++++|+.
T Consensus 291 ~Did~~El~d~f~~~-~l~~~e~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~qLrg 368 (399)
T PRK06059 291 EDLSLAEVYDLSTAL-ELDWYEHLGLCPKGEAEALLRSGATTLGGRIPVNPSGGLACFGEAIPAQAIAQVCELTWQLRG 368 (399)
T ss_pred HHCcEEeecccChHH-HHHHHHHcCCCCCCcHHHHHHCCCccCCCCeeecCCCccccCCccCCccHHHHHHHHHHHhcc
Confidence 999999999987653 1111111 244433333 5999999999999999999975
No 75
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=98.98 E-value=2.2e-09 Score=95.61 Aligned_cols=117 Identities=19% Similarity=0.190 Sum_probs=84.5
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCC-CChHHHHHHHHHHHHHcCCC--ccccccccccCCCC
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPH-PEGVGMVSCMEKALAKSGVA--KEDVNYINAHAPST 77 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~-~~~~~~~~~~~~al~~Agi~--~~dI~~ve~hgtgt 77 (206)
++||++++||.+++.|++.+.++. +|+|++...+.......+ ........+.+++|++|||+ ++|||++|.|.+.+
T Consensus 210 ~~DGAaAvvl~s~~~a~~l~~~pv-~I~g~g~~~~~~~~~~~~~~~~~~~~~Aa~~a~~~AGi~~p~~DiD~~ei~D~Ft 288 (385)
T PRK06066 210 FVDGAIVVVLASEEVAKKLTDDPV-WIKGIGWSTESSNLETAELGKANYMRIAADMAYKMAGIESPRKEVDAAEVDDRYS 288 (385)
T ss_pred CCCceEEEEEeCHHHHHhcCCCCE-EEEEEEEecCCcccccccccccHHHHHHHHHHHHHcCCCCCHHHCcEEEEecCCh
Confidence 479999999999999998776664 899988765532211111 12333457999999999998 69999999998877
Q ss_pred CcCCHhhhhc-----------------------ceecccccc--ccccccccchHHHHHHHHHhhhc
Q 045789 78 RLGDLREYQA-----------------------LRMNSTKSL--IGHLLGASGAAEAVATIKAIQTG 119 (206)
Q Consensus 78 ~~~D~~E~~a-----------------------~~v~s~k~~--~Gh~~~asG~~~l~~~~l~l~~~ 119 (206)
... .+.++. +||...-+. .||+.+|+|+..++.++.+|+..
T Consensus 289 ~~~-l~~~e~lG~~~~Ge~~~~v~~G~~~~~G~~PvN~~GG~la~Ghp~gatG~~~v~e~~~QL~g~ 354 (385)
T PRK06066 289 YKE-LQHIEALRLSEEPEKDSLLREGNFDPQGELPVNPSGGHLAKGVPLEASGLSLLLDAVEYLRGE 354 (385)
T ss_pred HHH-HHHHHHcCCCCCCchHHHHHCCCCCCCCCccccCCCchhcCCCccchhHHHHHHHHHHHHccc
Confidence 532 222222 344333333 49999999999999999999763
No 76
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=98.97 E-value=3.2e-09 Score=94.98 Aligned_cols=118 Identities=17% Similarity=0.149 Sum_probs=85.5
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCC---CCCCCC-hHHHHHHHHHHHHHcCCC--ccccccccccC
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHI---TAPHPE-GVGMVSCMEKALAKSGVA--KEDVNYINAHA 74 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~---~~~~~~-~~~~~~~~~~al~~Agi~--~~dI~~ve~hg 74 (206)
++||++++||.+++.|++.+.+..++|+|++...+.... ...++. ......+.+++|++|||+ ++|||++|.|.
T Consensus 216 ~~DGAaA~vl~s~~~A~~l~~~~~v~I~g~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~a~~~AGl~~~~~Did~~Ei~D 295 (398)
T PRK06157 216 VSDGAAAAIVTTPEIARALGKKDPVYVKALQLAVSNGWELQYNGWDGSYFPTTRIAARKAYREAGITDPREELSMAEVHD 295 (398)
T ss_pred CCCccEEEEEecHHHHHhhCCCCCeEEEEEEEecccccccccccccccccHHHHHHHHHHHHHcCCCCchhcCCEEEEec
Confidence 479999999999999998876567899999876543211 011221 223457899999999998 79999999999
Q ss_pred CCCCcCCHhhhhc-----------------------ceecccccc--ccccccccchHHHHHHHHHhhhc
Q 045789 75 PSTRLGDLREYQA-----------------------LRMNSTKSL--IGHLLGASGAAEAVATIKAIQTG 119 (206)
Q Consensus 75 tgt~~~D~~E~~a-----------------------~~v~s~k~~--~Gh~~~asG~~~l~~~~l~l~~~ 119 (206)
+.+.. ...-++. +++...-+. .||+.+|+|+..++.++.+|+..
T Consensus 296 ~Fs~~-~l~~~e~lGl~~~Ge~~~~~~~g~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~QLrg~ 364 (398)
T PRK06157 296 CFSIT-ELVTMEDLGLSERGQAWRDVLDGFFDADGGLPCQIDGGLKCFGHPIGASGLRMLYEMYLQLLGR 364 (398)
T ss_pred CChHH-HHHHHHHcCCCCCCchHHHHHCCCccCCCCeeecCCCCcccCCCcccHhHHHHHHHHHHHhccc
Confidence 87753 1111111 345444443 59999999999999999999764
No 77
>PRK07937 lipid-transfer protein; Provisional
Probab=98.97 E-value=4.7e-09 Score=92.51 Aligned_cols=112 Identities=18% Similarity=0.157 Sum_probs=81.4
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHH-cCCCccccccccccCCCCCc
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAK-SGVAKEDVNYINAHAPSTRL 79 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~-Agi~~~dI~~ve~hgtgt~~ 79 (206)
++||++++||.+++.|++.+.++ .+|.|++...+.......+. ....++++++++ ||++|+|||++|.|.+.+.
T Consensus 204 ~~DGAaA~vl~s~~~A~~l~~~p-v~I~g~~~~~~~~~~~~~d~---~~~~~~~~a~~~aAgi~~~diD~~Ei~D~F~~- 278 (352)
T PRK07937 204 ITDGAAAVVLAAGDRARELRERP-AWITGIEHRIESPSLGARDL---TRSPSTALAAEAATGGDAGGVDVAELHAPFTH- 278 (352)
T ss_pred CCCcceEEEEecHHHHHHcCCCc-EEEEEEEEeeCCcccccccc---ccHHHHHHHHHHhcCCCHHHCCEEEEeCCChH-
Confidence 47999999999999999888776 99999988765433211111 112344556666 5999999999999998875
Q ss_pred CCHhhhhc------cee---ccccccccccccccchHHHHHHHHHhhhc
Q 045789 80 GDLREYQA------LRM---NSTKSLIGHLLGASGAAEAVATIKAIQTG 119 (206)
Q Consensus 80 ~D~~E~~a------~~v---~s~k~~~Gh~~~asG~~~l~~~~l~l~~~ 119 (206)
......++ +++ |..++ ||+.+++|+..++.++.+|+.+
T Consensus 279 ~~l~~~e~lGl~g~~pvN~~GG~l~--ghp~gatG~~~~~e~~~QL~g~ 325 (352)
T PRK07937 279 QELILREALGLGDKTKVNPSGGALA--ANPMFAAGLERIGEAARHIWDG 325 (352)
T ss_pred HHHHHHHHcCCCCCCCcCCCccchh--cCchhHHHHHHHHHHHHHHhcc
Confidence 22333333 343 34443 9999999999999999999775
No 78
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI. This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.
Probab=98.96 E-value=1.8e-09 Score=97.53 Aligned_cols=114 Identities=20% Similarity=0.235 Sum_probs=83.3
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG 80 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~ 80 (206)
++||++++||.+++.|++.+.++.++|++++......... . ......+++++|++||++++|||++|.|.+.+...
T Consensus 269 ~~DGAaA~il~se~~A~~l~~~p~~~i~~~~~~~~~~~~~--~--~~~~~~a~~~al~~Agl~~~Did~~Ei~daFa~~~ 344 (430)
T TIGR02446 269 LTDGAAAVILMREGRAKELGMEPLGYIRSYAFTAIDVWQD--M--LMGPSYATPLALQRAGLALSDLTLIDMHEAFAAQT 344 (430)
T ss_pred CCCceEEEEEecHHHHHHcCCCceEEEEEEEeeccCchHh--h--cccHHHHHHHHHHHcCCCHHHCCEEEeccccHHHH
Confidence 4799999999999999998888889999987653211100 1 12225789999999999999999999999877531
Q ss_pred CH-hhhh-----------------cc---eeccccc--cccccccccchHHHHHHHHHhhh
Q 045789 81 DL-REYQ-----------------AL---RMNSTKS--LIGHLLGASGAAEAVATIKAIQT 118 (206)
Q Consensus 81 D~-~E~~-----------------a~---~v~s~k~--~~Gh~~~asG~~~l~~~~l~l~~ 118 (206)
=. .|.. .+ +|...-+ ..||+.+|+|+..++.++.+|+.
T Consensus 345 l~~~e~lg~~~~~~~~~g~~~~~G~~~~~pvN~~GG~la~GhP~gatG~~~v~e~~~qL~g 405 (430)
T TIGR02446 345 LANVQMFASDKFAQENLGRSKAMGEIDMSKFNVLGGSIAYGHPFAATGARMITQTLRELKR 405 (430)
T ss_pred HHHHHHhcCcchhhhcccccccCCCCCCCccCCCCCHHhcCCCccccHHHHHHHHHHHHhh
Confidence 10 0110 02 3333333 25999999999999999999975
No 79
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=98.90 E-value=5.4e-09 Score=94.33 Aligned_cols=115 Identities=21% Similarity=0.273 Sum_probs=82.7
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEE-EEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCc
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEI-LDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRL 79 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I-~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~ 79 (206)
++||++++||.+++.|++.+.++.++| .+.....+.... ..........+.+++|+++|++++|||++|.|...+..
T Consensus 264 ~~DGAaAvvl~s~~~A~~l~~~p~~~i~~~~~~~~~~~~~--~~~~~~~~~~a~~~a~~~AGl~~~Did~~Ei~d~Fa~~ 341 (427)
T PRK09268 264 LTDGASVVLLASEEWAAEHGLPVLAYLVDAETAAVDFVHG--KEGLLMAPAYAVPRLLARNGLTLQDFDFYEIHEAFASQ 341 (427)
T ss_pred CCCceEEEEEecHHHHHHcCCCceEEEEEEEEEcCCcccc--cchhhccHHHHHHHHHHHcCCCHHHCCEEEeccccHHH
Confidence 579999999999999999888887777 555555553110 00012244579999999999999999999999988754
Q ss_pred CCHhhh---h-------------------cceecccccc--ccccccccchHHHHHHHHHhhh
Q 045789 80 GDLREY---Q-------------------ALRMNSTKSL--IGHLLGASGAAEAVATIKAIQT 118 (206)
Q Consensus 80 ~D~~E~---~-------------------a~~v~s~k~~--~Gh~~~asG~~~l~~~~l~l~~ 118 (206)
. ..|+ + .++|...-+. +||+.+|+|+..++.++.+|+.
T Consensus 342 ~-l~~l~~~e~lG~~~~g~g~~~~~G~~~~~pvN~~GG~la~GhP~gATG~~~v~e~~~QL~~ 403 (427)
T PRK09268 342 V-LATLKAWEDEEYCRERLGLDAPLGSIDRSKLNVNGSSLAAGHPFAATGGRIVATLAKLLAE 403 (427)
T ss_pred H-HHHHHHhhhccccccccccccccCcCCCcccCCCcCHHhcCCCcccchHHHHHHHHHHHHh
Confidence 1 1111 1 1344333333 4999999999999999999964
No 80
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=98.90 E-value=3.5e-09 Score=94.57 Aligned_cols=117 Identities=26% Similarity=0.321 Sum_probs=77.7
Q ss_pred CCceEEEEEEccchHHHhcCC-ceeEEEEEEEecCCCCC-CCCCC----CChHHHHHHHHHHHHHcCCCccccccccccC
Q 045789 1 MGEGAGVLLLEELEHAKKRGT-NIYAEILDGSLTCDAYH-ITAPH----PEGVGMVSCMEKALAKSGVAKEDVNYINAHA 74 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~-~i~a~I~g~~~~~dg~~-~~~~~----~~~~~~~~~~~~al~~Agi~~~dI~~ve~hg 74 (206)
++||++++||.+++.|++.+. .-..+|.+.+...+... ...+. ........+++++|+++||+++|||++|.|.
T Consensus 217 ~~DGAAA~vl~S~~~a~~l~l~~~~v~i~~~a~~~~~~~~~~~~~~~~~~~~~~~~~A~~~al~~Agi~~~DID~~Ei~d 296 (393)
T cd00826 217 LNDGAAAAILMSEAEAQKHGLQSKAREIQALEMITDMASTFEDKKVIKMVGGDGPIEAARKALEKAGLGIGDLDLIEAHD 296 (393)
T ss_pred cCCCeEEEEEecHHHHHHcCCcccccccceEEEEEeeeccccCccccccccceeHHHHHHHHHHHcCCCHHHcCeeehhh
Confidence 479999999999999988763 11234444433222111 11111 1234457899999999999999999999998
Q ss_pred CCCCcCCHhhhhc-----------------------ceecccccc--ccccccccchHHHHHHHHHhhh
Q 045789 75 PSTRLGDLREYQA-----------------------LRMNSTKSL--IGHLLGASGAAEAVATIKAIQT 118 (206)
Q Consensus 75 tgt~~~D~~E~~a-----------------------~~v~s~k~~--~Gh~~~asG~~~l~~~~l~l~~ 118 (206)
..+.. ....++. ++|...-+. .||+.+|+|+..++.++.+|+.
T Consensus 297 ~Fa~~-~l~~~e~lgl~~~g~~~~~~~~g~~~~~G~~pvN~~GG~la~GhP~gAtG~~~~~e~~~qL~g 364 (393)
T cd00826 297 AFAAN-ACATNEALGLCPEGQGGALVDRGDNTYGGKSIINPNGGAIAIGHPIGASGAAICAELCFELKG 364 (393)
T ss_pred hhHHH-HHHHHHHhCCCcccchhhhhhcCccccCCcceECCCCchhhcCCCccccHHHHHHHHHHHHhh
Confidence 76542 1111111 234333332 5999999999999999999964
No 81
>PRK06065 acetyl-CoA acetyltransferase; Provisional
Probab=98.85 E-value=1.6e-08 Score=90.38 Aligned_cols=117 Identities=12% Similarity=0.177 Sum_probs=83.9
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCC-CCChHHHHHHHHHHHHHcCCCc--cccccccccCCCC
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAP-HPEGVGMVSCMEKALAKSGVAK--EDVNYINAHAPST 77 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~-~~~~~~~~~~~~~al~~Agi~~--~dI~~ve~hgtgt 77 (206)
++||++++||.+++.|++.+.++ .+|+|++...+....... .........+.+++|+++|+++ +|||++|.|.+.+
T Consensus 216 ~~DGAaA~vl~s~e~A~~l~~~~-v~I~g~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~aGi~~p~~diD~~ei~D~Fs 294 (392)
T PRK06065 216 VSDGAAAIVLASEDLARRYTDTP-VWVEGVGWTLDNTEWPNRDLAYPRYVEFAARMAYKMAGIERPRKEIDVAEPYDPFD 294 (392)
T ss_pred CCCceEEEEEeCHHHHHhcCCCC-EEEEEEEEecCccccccccccccHHHHHHHHHHHHHcCCCCchhhCcEEEecCCCh
Confidence 47999999999999999877655 458998876554321111 1223445689999999999985 9999999999987
Q ss_pred CcCCHhhhhc-----------------------ceecccccc--ccccccccchHHHHHHHHHhhhc
Q 045789 78 RLGDLREYQA-----------------------LRMNSTKSL--IGHLLGASGAAEAVATIKAIQTG 119 (206)
Q Consensus 78 ~~~D~~E~~a-----------------------~~v~s~k~~--~Gh~~~asG~~~l~~~~l~l~~~ 119 (206)
.. ....+++ +++...-+. .||+.+++|+..++.++.+|+..
T Consensus 295 ~~-~l~~~E~lG~~~~G~~~~~~~~g~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~QLrg~ 360 (392)
T PRK06065 295 YK-ELHHLEGLQLAKRGEAPKLLKEGVFDIDGDIPSSPSGGLLGVGNPIAAAGLMKVISIYWQLKGT 360 (392)
T ss_pred HH-HHHHHHHcCCCCCCcHHHHHHCCCccCCCCeeecCCCccccCCCCccHHHHHHHHHHHHHHhcc
Confidence 32 1111111 344333332 59999999999999999999753
No 82
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=98.82 E-value=2e-08 Score=90.72 Aligned_cols=117 Identities=21% Similarity=0.262 Sum_probs=81.1
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCC-----------------------CCCChHHHHHHHHHHH
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITA-----------------------PHPEGVGMVSCMEKAL 57 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~-----------------------~~~~~~~~~~~~~~al 57 (206)
++||++++||.+++.|++.+.++ ..|++++...++..... ..........+++++|
T Consensus 225 ~sDGAaAvvl~See~A~~l~~~p-v~i~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~ 303 (430)
T PRK06365 225 MSDGAACAILASEDKAFEITDKP-VLIKAIGTGSDTLRLADRPFGEVPLLPNESPDDYKDLRYPGVHSFRAGRMAAKEAY 303 (430)
T ss_pred cCCceEEEEEecHHHHHhcCCCC-eEEEEEEEeccccccccccccccccccccccccccccccccccccHHHHHHHHHHH
Confidence 47999999999999998877554 34566655444321100 0112234568999999
Q ss_pred HHcCCC--ccccccccccCCCCCcCCHhhhhc-----------------------ceecccccc--ccccccccchHHHH
Q 045789 58 AKSGVA--KEDVNYINAHAPSTRLGDLREYQA-----------------------LRMNSTKSL--IGHLLGASGAAEAV 110 (206)
Q Consensus 58 ~~Agi~--~~dI~~ve~hgtgt~~~D~~E~~a-----------------------~~v~s~k~~--~Gh~~~asG~~~l~ 110 (206)
+++||+ ++|||++|.|.+.+... ...+++ ++|...-+. .||+.+|+|+..++
T Consensus 304 ~~AGl~~~~~DiD~~Ei~D~Fa~~~-l~~lE~lGl~~~Ge~~~~~~~G~~~~~G~~piNt~GG~la~Ghp~GatG~~~~~ 382 (430)
T PRK06365 304 EMAGITDPLNDLDLIELHDAYTSSE-IQTYEDLGLCKYGEGGQFIESGKPELPGKLPVNPSGGLLAAGHAVGATGIMQAV 382 (430)
T ss_pred HHcCCCCCHHHCCEEEeecCCcHHH-HHHHHHcCCCCCCchHHHHHCCCcCCCCCccccCCCchhcCCCcccHHHHHHHH
Confidence 999997 79999999998876421 111111 244333333 59999999999999
Q ss_pred HHHHHhhhc
Q 045789 111 ATIKAIQTG 119 (206)
Q Consensus 111 ~~~l~l~~~ 119 (206)
.++.+|+..
T Consensus 383 e~~~QLrG~ 391 (430)
T PRK06365 383 FMFWQLQGR 391 (430)
T ss_pred HHHHHHhcc
Confidence 999999864
No 83
>KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism]
Probab=98.80 E-value=4.7e-09 Score=89.63 Aligned_cols=107 Identities=24% Similarity=0.379 Sum_probs=83.9
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG 80 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~ 80 (206)
++||+++++|++++.|.+.|.+++++.+.+...- ..|...+.+..-+|..+|+.+|+..+|||++|.+
T Consensus 279 vSDGa~aVLLmkRs~A~qlgLPvlgvfr~f~~vG-----v~P~iMGiGPavAIp~alk~aGL~v~did~FEIN------- 346 (435)
T KOG1389|consen 279 VSDGAGAVLLMKRSVAMQLGLPVLGVFRDFAAVG-----VPPAIMGIGPAVAIPKALKAAGLEVDDIDLFEIN------- 346 (435)
T ss_pred cccchhhhhhhhhhhHhhcCCceeEEeeeeeeec-----CCHHHcCCCchhhhHHHHHHcCCcccccceeehh-------
Confidence 5899999999999999999999999999987641 2233334555788999999999999999999965
Q ss_pred CHhhhhc-------------ceeccccccccccccccchHHHHHHHHHhhhc
Q 045789 81 DLREYQA-------------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTG 119 (206)
Q Consensus 81 D~~E~~a-------------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~ 119 (206)
++.-..+ +.+..-.--+||+.+|+|...++..+.-|++.
T Consensus 347 EAFAsQ~~yc~~KL~ld~ekVN~~GGaiAlGHPlGatGAR~VaTlL~emKrr 398 (435)
T KOG1389|consen 347 EAFASQALYCRNKLGLDPEKVNVNGGAIALGHPLGATGARCVATLLHEMKRR 398 (435)
T ss_pred HHHHHHHHHHHHHhCCCHHHcCCCCceeeccCCcCCccHhHHHHHHHHHHhh
Confidence 2222222 33434444589999999999999998888764
No 84
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=98.78 E-value=7.1e-08 Score=88.67 Aligned_cols=116 Identities=13% Similarity=0.189 Sum_probs=84.4
Q ss_pred CceEEEEEEccchHHHhcCC--ceeEEEEEEEecCCCCCCC-CCC-CChHHHHHHHHHHHHHcCCCccccccccccCCCC
Q 045789 2 GEGAGVLLLEELEHAKKRGT--NIYAEILDGSLTCDAYHIT-APH-PEGVGMVSCMEKALAKSGVAKEDVNYINAHAPST 77 (206)
Q Consensus 2 gEGa~alvL~~~~~A~~~g~--~i~a~I~g~~~~~dg~~~~-~~~-~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt 77 (206)
.||++++||.+++.|++.+. .-...|.|++..+|..... ..+ ........+.+++|++|||+++|||++|.|.+.+
T Consensus 243 ~DGaaAvil~S~e~A~~l~~~~~~~V~i~g~a~~~~~~~~~~r~~~~~~~~~~~aa~~a~~~AGi~~~Did~~elydcF~ 322 (498)
T PRK08257 243 VDQGAAVLLTSVAKARRLGVPEDRWVYLHGGADAHDPYDILERPDLHRSPAIRAAGRRALALAGLGIDDIDAFDLYSCFP 322 (498)
T ss_pred cccceEEEEeeHHHHHhcCCCCCceEEEEEEEEeeCccccccccccccChHHHHHHHHHHHHhCCCHHHCCEEEeccCCH
Confidence 69999999999999998772 2246689988876653211 111 1234556799999999999999999999999987
Q ss_pred CcCCHhhhhc--------ceec--cccccccccccccchHHHHHHHHHhhh
Q 045789 78 RLGDLREYQA--------LRMN--STKSLIGHLLGASGAAEAVATIKAIQT 118 (206)
Q Consensus 78 ~~~D~~E~~a--------~~v~--s~k~~~Gh~~~asG~~~l~~~~l~l~~ 118 (206)
... .+.+++ +++. .--...||+.++.|+.+++.++.+|+.
T Consensus 323 ~~~-~~~~E~LGl~~~g~~pvN~sGGl~s~G~P~~a~g~~~i~E~v~QLRg 372 (498)
T PRK08257 323 SAV-QVAARELGLDLDDPRPLTVTGGLPFFGGPGNNYVTHAIAEMVERLRA 372 (498)
T ss_pred HHH-HHHHHHcCcCCCCCCCcCCCcChhhcCCchhhHHHHHHHHHHHHHhh
Confidence 532 222222 1332 222246999999999999999999985
No 85
>PRK07855 lipid-transfer protein; Provisional
Probab=98.74 E-value=5.2e-08 Score=86.86 Aligned_cols=113 Identities=15% Similarity=0.110 Sum_probs=81.0
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCC-----CCCC-ChHHHHHHHHHHHHHcCCCccccccccccC
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHIT-----APHP-EGVGMVSCMEKALAKSGVAKEDVNYINAHA 74 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~-----~~~~-~~~~~~~~~~~al~~Agi~~~dI~~ve~hg 74 (206)
++||++++||.+++.|++.++++ .+|+|++...+..... ..+. .......+++++|+++||+++|||++|.|.
T Consensus 215 ~sDGAaAvvl~see~A~~l~~~p-v~I~g~~~~~~~~~~~~~~~~~~d~~~~~~~~~aa~~a~~~AGi~~~DiDv~El~D 293 (386)
T PRK07855 215 ESDGAVALVVTSAERARDLKQRP-AVIKAAAQGSGADQYMMTSYYRDDITGLPEMGLVARQLWAQSGLGPADIDTAILYD 293 (386)
T ss_pred cCCceEEEEEecHHHHhhCCCCC-EEEEEEEEecCCccccccccccccccccchHHHHHHHHHHHcCCCHHHCcEEEecc
Confidence 47999999999999998877665 5899998765432111 0111 123456899999999999999999999999
Q ss_pred CCCCcCCHhhhhc-----------------------cee---ccccccccccccccchHHHHHHHHHhhhc
Q 045789 75 PSTRLGDLREYQA-----------------------LRM---NSTKSLIGHLLGASGAAEAVATIKAIQTG 119 (206)
Q Consensus 75 tgt~~~D~~E~~a-----------------------~~v---~s~k~~~Gh~~~asG~~~l~~~~l~l~~~ 119 (206)
+.+.. ..+.+++ +|+ |..++ .||+. |+..++.++++|+..
T Consensus 294 ~Ft~~-~l~~~E~lG~~~~Ge~~~~v~~G~~~~~G~lPvN~sGGll~-~gh~~---G~~~i~E~~~QLrG~ 359 (386)
T PRK07855 294 HFTPF-VLMQLEELGFCGRGEAKDFIADGALELGGRLPINTHGGQLG-EAYIH---GMNGIAEAVRQLRGT 359 (386)
T ss_pred CCcHH-HHHHHHHcCCCCCCcHHHHHHCCCcccCCcccccCCCcccc-cCchh---hHHHHHHHHHHHhCC
Confidence 98752 1111111 566 44444 47865 999999999999864
No 86
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C ....
Probab=98.69 E-value=3.7e-08 Score=74.30 Aligned_cols=92 Identities=25% Similarity=0.304 Sum_probs=58.8
Q ss_pred ceeEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcCCHhhhhc-------ceecccc
Q 045789 22 NIYAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREYQA-------LRMNSTK 94 (206)
Q Consensus 22 ~i~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~E~~a-------~~v~s~k 94 (206)
+++++|.+++..... +...+.+...+++++|+++|++++|||++|.|...+...=. -... +++..--
T Consensus 2 ~pla~i~~~~~~~~~-----P~~~~~~p~~A~~~al~~ag~~~~did~~Ei~EaFA~~~l~-~~~~lg~~~~~vN~~GG~ 75 (123)
T PF02803_consen 2 KPLARIVGYASAGVD-----PEDMGLGPVPAARKALERAGLTPDDIDVIEINEAFAAQVLA-FLEALGLDPEKVNPNGGA 75 (123)
T ss_dssp -ESEEEEEEEEEE-------GGGGGGTHHHHHHHHHHHHT--GGGESEEEE--SBHHHHHH-HHHHHTTGGGGBSTT--H
T ss_pred CeEEEEEEEEEEecC-----HHHhCchHHHHHHHHHHHhCCCccccchhhccchhhhHHHH-hhccccccccccCccccc
Confidence 578999998765321 22223455789999999999999999999999776642111 1111 2222222
Q ss_pred ccccccccccchHHHHHHHHHhhhc
Q 045789 95 SLIGHLLGASGAAEAVATIKAIQTG 119 (206)
Q Consensus 95 ~~~Gh~~~asG~~~l~~~~l~l~~~ 119 (206)
-.+||+.+|+|+..++.++..|+..
T Consensus 76 la~GHP~gasG~r~~~~l~~~L~~~ 100 (123)
T PF02803_consen 76 LALGHPLGASGARLVVELAHQLRRR 100 (123)
T ss_dssp HHH-BHTTTHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccchhhhhHHHHHHh
Confidence 2369999999999999999999763
No 87
>KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=98.58 E-value=7e-08 Score=80.77 Aligned_cols=113 Identities=26% Similarity=0.408 Sum_probs=88.5
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEEEEEEe-cCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCc
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSL-TCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRL 79 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~-~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~ 79 (206)
+.||++++++.+++..++.+.+++++|.++.+ .+| |.-.+.+..-+|+.+|+.+|+...|||.||.+....+.
T Consensus 252 i~DGA~AvivAsEdavK~~NlkPLARiVays~vGcd------P~IMGIGPvPAI~~vLKksGlkl~DiDl~EvNEAFApQ 325 (396)
T KOG1391|consen 252 IADGAGAVIVASEDAVKKHNLKPLARIVAYSVVGCD------PSIMGIGPVPAISGVLKKSGLKLKDIDLVEVNEAFAPQ 325 (396)
T ss_pred ccCCceeEEEechhHHhhcCCchhhhhheeeeeccC------hhhccccCcHHHHHHHHHcCCcccccceEEechhhchH
Confidence 47999999999999999999999999999865 444 23334445678999999999999999999998777776
Q ss_pred CCHhhhhc------ceeccccccccccccccchHHHHHHHHHhhhc
Q 045789 80 GDLREYQA------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTG 119 (206)
Q Consensus 80 ~D~~E~~a------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~ 119 (206)
.-..|..- +.+..-.-.+||+.++||..--...+.-|+++
T Consensus 326 ~LAv~r~L~ld~sKlNVNGGAIALGHPLgaSGsRIt~HlVHEL~Rr 371 (396)
T KOG1391|consen 326 YLAVERSLDLDISKLNVNGGAIALGHPLGASGSRITAHLVHELRRR 371 (396)
T ss_pred HHHHHHhhCCChhhccccCceeeccCccccCcchhhHHHHHHHHHc
Confidence 65555544 45555555689999999987777777666553
No 88
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=98.12 E-value=2e-06 Score=76.07 Aligned_cols=63 Identities=13% Similarity=0.096 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHcCCCccccccccccCCCCCcCCHhhhhc--cee-----ccccccccccccccchHHHHH
Q 045789 49 MVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREYQA--LRM-----NSTKSLIGHLLGASGAAEAVA 111 (206)
Q Consensus 49 ~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~E~~a--~~v-----~s~k~~~Gh~~~asG~~~l~~ 111 (206)
..++|+++|+++|++++||+||..|.+++...|.+.... +.+ -..-..+||+.+|+-.+.|-.
T Consensus 273 ~~~~i~~~L~~~gl~~~dId~~~~Hq~~~~~~d~~~~~llg~~~~~~~~~~~~~~~GNt~sasi~~~L~~ 342 (372)
T PRK07515 273 VAEHIVEHLAENGLTPADVKRFWLHQANINMNQLIGKKVLGRDATPEEAPVILDEYANTSSAGSIIAFHK 342 (372)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEECCCCHHHHHHHHHHhccCCCChhhceEeHHhcCCchhhHHHHHHHH
Confidence 567999999999999999999999999999999775432 111 112346799988876555443
No 89
>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism]
Probab=97.95 E-value=3.1e-06 Score=71.28 Aligned_cols=116 Identities=25% Similarity=0.300 Sum_probs=83.5
Q ss_pred CceEEEEEEccchHHHhcCCceeE-EEEEEEecCCCCCCCCCC-----CChHHHHHHHHHHHHHcCCCccccccccccCC
Q 045789 2 GEGAGVLLLEELEHAKKRGTNIYA-EILDGSLTCDAYHITAPH-----PEGVGMVSCMEKALAKSGVAKEDVNYINAHAP 75 (206)
Q Consensus 2 gEGa~alvL~~~~~A~~~g~~i~a-~I~g~~~~~dg~~~~~~~-----~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgt 75 (206)
+||+++-+|.++....+.|..--+ +|.|.-+..|-.+..... ...+-...+.++.+++.|++|.||+.||.|.+
T Consensus 221 sdgaaaailaseafv~k~gl~~qaveivg~em~td~ps~faeks~ikm~gfdm~~~aa~~l~aksgltpndvqvielhdc 300 (408)
T KOG1406|consen 221 SDGAAAAILASEAFVRKHGLEKQAVEIVGMEMATDPPSTFAEKSLIKMAGFDMTRLAAKRLFAKSGLTPNDVQVIELHDC 300 (408)
T ss_pred CCchHHHHHhHHHHHHhcccHHHHHHHHHHHhccCCchhhhhhhhhhhhcchHHHHHHHHHHHHcCCCcccceEEEeecc
Confidence 799999999998888887755544 477776666643211111 11234466889999999999999999999999
Q ss_pred CCCcCCHhhhhc---ce--------------------eccccc--cccccccccchHHHHHHHHHhhh
Q 045789 76 STRLGDLREYQA---LR--------------------MNSTKS--LIGHLLGASGAAEAVATIKAIQT 118 (206)
Q Consensus 76 gt~~~D~~E~~a---~~--------------------v~s~k~--~~Gh~~~asG~~~l~~~~l~l~~ 118 (206)
.++ ++.+-++| |+ |.-..+ .-||+.+|.|+++-...+.+|+-
T Consensus 301 fs~-nelityealglcpegqg~~~vdrgdntyggkwvinpsggliskghplgatglaqcaelcwqlrg 367 (408)
T KOG1406|consen 301 FSA-NELITYEALGLCPEGQGGEFVDRGDNTYGGKWVINPSGGLISKGHPLGATGLAQCAELCWQLRG 367 (408)
T ss_pred cch-hhhhhHHHhcCCCCCCCceeeecCCCccCceEEECCCCccccCCCcCccchHHHHHHHHHHHhh
Confidence 885 66665666 21 222222 24999999999999999999964
No 90
>KOG1392 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=97.75 E-value=3.8e-05 Score=65.54 Aligned_cols=139 Identities=19% Similarity=0.229 Sum_probs=91.2
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEEEEEE-ecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCC-
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGS-LTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTR- 78 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~-~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~- 78 (206)
+-||+.+.+++.++.|++.|-++.+.++.+- +++|-.......| .-.+.+.|++||++..|||.+|.|....-
T Consensus 302 ltdgasa~limteekala~gykpkaylrdflyvsqdpkdqlllgp-----ay~ipkll~kagltlkdid~feiheafagq 376 (465)
T KOG1392|consen 302 LTDGASAALIMTEEKALANGYKPKAYLRDFLYVSQDPKDQLLLGP-----AYVIPKLLDKAGLTLKDIDVFEIHEAFAGQ 376 (465)
T ss_pred hcCcchhhhhhhHHHHHHcCCCchHHhhhheeeccCchhheeccc-----ccccHHHHHHcCCcccccchhhhHHHHhHH
Confidence 3589999999999999999999999999984 5666543323333 45688999999999999999999965322
Q ss_pred -cCCHhhhhc----------------cee-----ccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCCCCCCC
Q 045789 79 -LGDLREYQA----------------LRM-----NSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPDKHVLS 136 (206)
Q Consensus 79 -~~D~~E~~a----------------~~v-----~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~ 136 (206)
+.....+.. .++ =...-.+||+++|.|..-.+.+.-.|++
T Consensus 377 ilanlkamdsdwfck~ymgr~~kvg~ppl~k~nnwggslsighpfgatgvrl~mh~anrl~~------------------ 438 (465)
T KOG1392|consen 377 ILANLKAMDSDWFCKEYMGRSGKVGRPPLDKLNNWGGSLSIGHPFGATGVRLAMHSANRLKE------------------ 438 (465)
T ss_pred HHhhhhhhcchHHHHHHhcccCccCCCChHHhcccCcceecCCcccccchhhHHHHHhHHHh------------------
Confidence 111100000 111 1112248999999998766655544332
Q ss_pred CCCCcccccccccccCCCCeEEEEEeecccceeEEEccccC
Q 045789 137 RTSGASAAFISIPVIKQFKTRFVLISFNGSFLSSLYMASCF 177 (206)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~n~~~vl~~~~ 177 (206)
...++..+..-..||...+++++.+|
T Consensus 439 ---------------e~gqygvvaacaaggqgvamlieayp 464 (465)
T KOG1392|consen 439 ---------------EKGQYGVVAACAAGGQGVAMLIEAYP 464 (465)
T ss_pred ---------------hcCceeEeehhhcCCcceEEEeeccC
Confidence 11222333333478888889888875
No 91
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=97.23 E-value=0.00025 Score=61.45 Aligned_cols=64 Identities=17% Similarity=0.209 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHcCCCccccccccccCCCCCcCCHhhhhc-ce---eccccccccccccccchHHHHHH
Q 045789 49 MVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREYQA-LR---MNSTKSLIGHLLGASGAAEAVAT 112 (206)
Q Consensus 49 ~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~E~~a-~~---v~s~k~~~Gh~~~asG~~~l~~~ 112 (206)
..++++++|+++|++++||+++-.|..+...-+.+.-.- ++ +......+||+.+++=.+.|...
T Consensus 232 ~~~~i~~~L~~~gl~~~did~~~~H~~~~~~~~~i~~~l~l~~e~~~~~~~~~Gn~~sas~~~~L~~~ 299 (329)
T PRK07204 232 LMKFIDKLLMDAGYTLADIDLIVPHQASGPAMRLIRKKLGVDEERFVTIFEDHGNMIAASIPVALFEA 299 (329)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEeCCCCHHHHHHHHHHcCCCHHHhhhhHhhhCcHHHHHHHHHHHHH
Confidence 457899999999999999999999998887655443222 22 23455678999877665555543
No 92
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=97.16 E-value=0.0006 Score=58.72 Aligned_cols=65 Identities=20% Similarity=0.238 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHcCCCccccccccccCCCCCcCCHhhhhc-ce---eccccccccccccccchHHHHHHH
Q 045789 49 MVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREYQA-LR---MNSTKSLIGHLLGASGAAEAVATI 113 (206)
Q Consensus 49 ~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~E~~a-~~---v~s~k~~~Gh~~~asG~~~l~~~~ 113 (206)
..++++++|+++|++++||+++..|..+.+.-+.+.... ++ +...-..+||+.+|+-.+.|..++
T Consensus 221 ~~~~~~~~l~~~g~~~~di~~~~~h~~~~~~~~~~~~~lgi~~~k~~~~~~~~Gn~~sas~~~~L~~~~ 289 (318)
T TIGR00747 221 MGDVVEETLEANGLDPEDIDWFVPHQANLRIIEALAKRLELDMSQVVKTVHKYGNTSAASIPLALDELL 289 (318)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEECCCCHHHHHHHHHHcCCCHHHeeehHhhhCCHHHHHHHHHHHHHH
Confidence 456789999999999999999999988877666554332 22 111223489999988777776654
No 93
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=97.13 E-value=0.00031 Score=60.52 Aligned_cols=65 Identities=20% Similarity=0.268 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHcCCCccccccccccCCCCCcCCHhhhhc-ce---eccccccccccccccchHHHHHHH
Q 045789 49 MVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREYQA-LR---MNSTKSLIGHLLGASGAAEAVATI 113 (206)
Q Consensus 49 ~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~E~~a-~~---v~s~k~~~Gh~~~asG~~~l~~~~ 113 (206)
..++++++|+++|++++||+++..|..+...-+..+... ++ +...-..+||+.+++-++.|..++
T Consensus 221 ~~~~i~~~l~~~g~~~~di~~~~~h~~~~~~~~~~~~~lg~~~~~~~~~~~~~Gn~~~a~~~~~L~~~~ 289 (319)
T PRK09352 221 LAKVAREALEAAGLTPEDIDWLVPHQANLRIIDATAKKLGLPMEKVVVTVDKYGNTSAASIPLALDEAV 289 (319)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEECCCCHHHHHHHHHHhCCCHHHhhhhHHhhCCHHHHHHHHHHHHHH
Confidence 456899999999999999999999977665555443332 22 122234689999888777776554
No 94
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=97.02 E-value=0.00035 Score=59.97 Aligned_cols=65 Identities=22% Similarity=0.276 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHcCCCccccccccccCCCCCcCCHhhhhc-ce---eccccccccccccccchHHHHHHH
Q 045789 49 MVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREYQA-LR---MNSTKSLIGHLLGASGAAEAVATI 113 (206)
Q Consensus 49 ~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~E~~a-~~---v~s~k~~~Gh~~~asG~~~l~~~~ 113 (206)
..++++++|+++|++++||+++..|..+...-+.+.... ++ +...-..+||+.+++-.+.|..++
T Consensus 225 ~~~~i~~~l~~~g~~~~di~~~~~h~~~~~~~~~~~~~lgl~~~~~~~~~~~~Gn~~sas~~~~L~~~~ 293 (320)
T cd00830 225 MPESIEEALEKAGLTPDDIDWFVPHQANLRIIEAVAKRLGLPEEKVVVNLDRYGNTSAASIPLALDEAI 293 (320)
T ss_pred hHHHHHHHHHHcCCCHHHCCEEEECCCCHHHHHHHHHHhCCCHHHhhhhHHhhCcHHHHHHHHHHHHHH
Confidence 457899999999999999999999988877666554332 21 112334689999998888777664
No 95
>COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism]
Probab=96.96 E-value=5.9e-05 Score=67.53 Aligned_cols=109 Identities=23% Similarity=0.240 Sum_probs=62.5
Q ss_pred ceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCCCCCCCh-HHHHHHHHHHHHHcCCC-ccccccccccCCCCCcC
Q 045789 3 EGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHITAPHPEG-VGMVSCMEKALAKSGVA-KEDVNYINAHAPSTRLG 80 (206)
Q Consensus 3 EGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~~~~~~-~~~~~~~~~al~~Agi~-~~dI~~ve~hgtgt~~~ 80 (206)
+|++++++.+++.+.+.+.++.+.++++.+..- .|.. ......+.++|+.+++. .+||+++|.+..+..+.
T Consensus 248 dga~a~~~~~~~~~~~~~l~~~A~~~a~~~aGv-------~p~~~~~~v~av~~~~~~~~l~~~edlgl~e~nEafa~~~ 320 (392)
T COG0183 248 DGAAALLLMSESKAKELGLAPLAAIRAYAMAGV-------DPSIMDGPVAAVHDALTIAGLLALEDLGLAEKGEAFAAVA 320 (392)
T ss_pred cHHHHHHHhhHHHHHHCCCcHHHHHHHHHHhCC-------CcccccCCHHHHHHHHHHcCCchhhhcCceecChHHHHHH
Confidence 455555555555555566666665555544321 1100 12255677777777777 77777777553222211
Q ss_pred CHhhhhc----ceeccccccccccccccchHHHHHHHHHhhh
Q 045789 81 DLREYQA----LRMNSTKSLIGHLLGASGAAEAVATIKAIQT 118 (206)
Q Consensus 81 D~~E~~a----~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~ 118 (206)
+.....- +++..---.+||+.+|+|+..+..++.+|+.
T Consensus 321 ~~~~~~~G~~~VN~~GGaiA~GHPiGAtG~~~~~~l~~ql~~ 362 (392)
T COG0183 321 LGVTKILGDLPVNPSGGAIALGHPIGATGARILVELARQLRG 362 (392)
T ss_pred HhhHHhcCCceeCCCcchhhcCCCccchHHHHHHHHHHHHhh
Confidence 1110000 2232223347999999999999999999987
No 96
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=96.92 E-value=0.0018 Score=56.31 Aligned_cols=106 Identities=20% Similarity=0.172 Sum_probs=65.2
Q ss_pred CCceEEEEEEccchHHHhcCCceeEEEEEEEecCCCCCCC--C-----CCCCh--------HHHHHHHHHHHHHcCCCcc
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYAEILDGSLTCDAYHIT--A-----PHPEG--------VGMVSCMEKALAKSGVAKE 65 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~--~-----~~~~~--------~~~~~~~~~al~~Agi~~~ 65 (206)
+|||++|+||++.... ..+. .+.+.....++.... . ...++ ....++++++|+++|++++
T Consensus 183 ~GDGA~A~ll~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~~~~ 257 (338)
T PRK09258 183 LGSGAAAAVLTRGSLH-PRGH----RLLGGVTRAATEHHELCQGGRDGMRTDAVGLLKEGVELAVDTWEAFLAQLGWAVE 257 (338)
T ss_pred ecccceEEEEecCCCC-CCcc----eeeeeeeecCCCcccccccCccceEEcHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 4899999999975421 1122 234433332222110 0 01121 2334588899999999999
Q ss_pred ccccccccCCCCCcCCHhhhhc-cee----ccccccccccccccchHHHHHH
Q 045789 66 DVNYINAHAPSTRLGDLREYQA-LRM----NSTKSLIGHLLGASGAAEAVAT 112 (206)
Q Consensus 66 dI~~ve~hgtgt~~~D~~E~~a-~~v----~s~k~~~Gh~~~asG~~~l~~~ 112 (206)
||+++-.|-.+.+..+.++-.. ++. ... ..+||+.+++=.+.|..+
T Consensus 258 did~~i~H~~~~~~~~~~~~~lgl~~~k~~~~~-~~~GN~~sas~~~~L~~~ 308 (338)
T PRK09258 258 QVDRVICHQVGAAHTRAILKALGIDPEKVFTTF-PTLGNMGPASLPITLAMA 308 (338)
T ss_pred HCCEEecCCCCHHHHHHHHHHhCCCHHHceehH-hhhCCcHHhHHHHHHHHH
Confidence 9999999988887777664433 221 122 368999998766666554
No 97
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=96.76 E-value=0.0017 Score=55.98 Aligned_cols=64 Identities=16% Similarity=0.194 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHcCCCccccccccccCCCCCcCCHhhhhc-ce---eccccccccccccccchHHHHHH
Q 045789 49 MVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREYQA-LR---MNSTKSLIGHLLGASGAAEAVAT 112 (206)
Q Consensus 49 ~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~E~~a-~~---v~s~k~~~Gh~~~asG~~~l~~~ 112 (206)
..++++++|+++|++++||+++-.|-.+...-+.+.-.. ++ +-.....+||+.+++-.+.|..+
T Consensus 227 ~~~~i~~~L~~~g~~~~did~~~~h~~~~~~~~~~~~~lg~~~~~~~~~~~~~Gn~~sas~~~~L~~~ 294 (325)
T PRK12879 227 MPKGARQVLEKAGLTKDDIDWVIPHQANLRIIESLCEKLGIPMEKTLVSVEYYGNTSAATIPLALDLA 294 (325)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEECCCCHHHHHHHHHHcCCCHHHhhhhHhhhCchHHHHHHHHHHHH
Confidence 346889999999999999999999977665544432222 21 11134678999988877777544
No 98
>PRK06840 hypothetical protein; Validated
Probab=95.70 E-value=0.014 Score=50.82 Aligned_cols=64 Identities=17% Similarity=0.106 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHcCCCccccccccccCCCCCcCCHhhhhc-ceec--cccccccccccccchHHHHHH
Q 045789 49 MVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREYQA-LRMN--STKSLIGHLLGASGAAEAVAT 112 (206)
Q Consensus 49 ~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~E~~a-~~v~--s~k~~~Gh~~~asG~~~l~~~ 112 (206)
..++++++|+++|++++||+++-.|-.+...-+.+...- ++.. .....+||+.+++-.+.|-..
T Consensus 239 ~~~~i~~~L~~~gl~~~did~~~~h~~~~~~~~~~~~~Lgl~~~~~~~~~~~Gn~~sas~~~~L~~~ 305 (339)
T PRK06840 239 FLKVIREALRKSGYTPKDIDYLAILHMKRSAHIALLEGLGLTEEQAIYLDEYGHLGQLDQILSLHLA 305 (339)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEECCcCHHHHHHHHHHcCCCHHHeEeHHhccchhhhhHHHHHHHH
Confidence 457899999999999999999877655544444332221 1100 123578999988776666544
No 99
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=95.53 E-value=0.041 Score=48.92 Aligned_cols=63 Identities=13% Similarity=0.078 Sum_probs=44.2
Q ss_pred HHHHHHHHHHcCCCccccccccccCCCCCcCCHhhhh------cce---eccccccccccccccchHHHHHH
Q 045789 50 VSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREYQ------ALR---MNSTKSLIGHLLGASGAAEAVAT 112 (206)
Q Consensus 50 ~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~E~~------a~~---v~s~k~~~Gh~~~asG~~~l~~~ 112 (206)
...++++|+++|++++||+++-.|-......+.+--. .++ +-..-..+||+.+||-.+.|..+
T Consensus 275 ~~~i~~~L~~~gl~~~DId~~v~Hq~n~~~~~~v~~~l~~~~~gl~~~k~~~~~~~~GNt~sAsipi~L~~a 346 (378)
T PRK06816 275 IKPLLELVDKRNLDPDDIDYFLPHYSSEYFREKIVELLAKAGFMIPEEKWFTNLATVGNTGSASIYIMLDEL 346 (378)
T ss_pred HHHHHHHHHHcCCChhhCCEEeeCcccHHHHHHHHHHHHhccCCCChhheEEeccccccccchHHHHHHHHH
Confidence 5678889999999999999999997766555544221 111 11222468999999877777655
No 100
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=95.49 E-value=0.013 Score=52.04 Aligned_cols=61 Identities=20% Similarity=0.278 Sum_probs=44.7
Q ss_pred HHHHHHHHHcCCCccccccccccCCCCCcCCHhhhhc-ce----eccccccccccccccchHHHHHH
Q 045789 51 SCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREYQA-LR----MNSTKSLIGHLLGASGAAEAVAT 112 (206)
Q Consensus 51 ~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~E~~a-~~----v~s~k~~~Gh~~~asG~~~l~~~ 112 (206)
++++++|+++|++++||+++-.|-.+...-|.+.... ++ ...+ ..+||+.+|+=.+.|-.+
T Consensus 284 ~~i~~~L~~~gl~~~dId~~v~Hq~n~~~~~~~~~~Lgl~~ek~~~~l-~~~GNt~sAsi~~~L~~~ 349 (379)
T PLN02326 284 QVIESALQKAGLTAESIDWLLLHQANQRIIDAVAQRLGIPPEKVISNL-ANYGNTSAASIPLALDEA 349 (379)
T ss_pred HHHHHHHHHcCCCHHHCCEEEECCCCHHHHHHHHHHcCCCHHHeeecH-hhcCcHHHHHHHHHHHHH
Confidence 5788999999999999999999987776666553332 21 1233 578999988777766555
No 101
>PRK04262 hypothetical protein; Provisional
Probab=95.41 E-value=0.029 Score=49.16 Aligned_cols=66 Identities=17% Similarity=0.184 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHHcCCCccccccccccCCCCCcCCHhhhhc-ce-----eccccccccccccccchHHHHHH
Q 045789 47 VGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREYQA-LR-----MNSTKSLIGHLLGASGAAEAVAT 112 (206)
Q Consensus 47 ~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~E~~a-~~-----v~s~k~~~Gh~~~asG~~~l~~~ 112 (206)
....++++++|+++|++++||+++-.|-.+....+.+.-.- ++ .+-.-..+||+.+|+=.+.|..+
T Consensus 209 ~~~~~~i~~~L~~~gl~~~dId~~v~Hq~n~~~~~~~~~~Lgl~~ek~~~~~~~~~~GNt~sAsi~~~L~~~ 280 (347)
T PRK04262 209 KHIISAAKGLMEKLGLKPSDYDYAVFHQPNGKFPLRVAKMLGFTKEQVKPGLLTPYIGNTYSGSALLGLAAV 280 (347)
T ss_pred HHHHHHHHHHHHHhCcCHHHhceeecCCCchHHHHHHHHHcCCCHHHhhccchhhhhCChHHHHHHHHHHHH
Confidence 34567889999999999999999999966555555443222 22 11123578999999877777654
No 102
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=95.12 E-value=0.021 Score=49.90 Aligned_cols=66 Identities=20% Similarity=0.244 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHHcCCCccccccccccCCCCCcCCHhhhhc-ce---eccccccccccccccchHHHHHH
Q 045789 47 VGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREYQA-LR---MNSTKSLIGHLLGASGAAEAVAT 112 (206)
Q Consensus 47 ~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~E~~a-~~---v~s~k~~~Gh~~~asG~~~l~~~ 112 (206)
..+.++++++|++++++++|||++..|=......|.+--.. ++ +-..-..+|++.+||=.+.|.++
T Consensus 223 ~~~~~~~~~~L~~~~l~~~dId~~vpHQan~ri~~~i~~~l~~~~~k~~~~~~~yGNtsaAsiplaL~~~ 292 (323)
T COG0332 223 RAMPKAIEEVLEKAGLTPEDIDWFVPHQANLRIIEAIAKKLGIPEEKVVVTVDKYGNTSAASIPLALDEA 292 (323)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEccccccHHHHHHHHHHcCCCHHHHhhHHHHhcccccchHHHHHHHH
Confidence 45678999999999999999999999954444333221111 21 11222346788777666555544
No 103
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=95.06 E-value=0.025 Score=49.06 Aligned_cols=63 Identities=14% Similarity=0.145 Sum_probs=44.0
Q ss_pred HHHHHHHHHHcCCCccccccccccCCCCCcCCHhhhhc-ce---eccccccccccccccchHHHHHH
Q 045789 50 VSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREYQA-LR---MNSTKSLIGHLLGASGAAEAVAT 112 (206)
Q Consensus 50 ~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~E~~a-~~---v~s~k~~~Gh~~~asG~~~l~~~ 112 (206)
-++++++|+++|++++||+++-.|-.+...-+.+.... ++ +-..-..+||+.+|+=.+.|-.+
T Consensus 229 ~~~i~~~L~~~g~~~~did~~~~hq~~~~~~~~~~~~lgl~~~k~~~~l~~~Gn~~sasi~~~L~~~ 295 (326)
T CHL00203 229 PAVIIKCLNALNISIDEVDWFILHQANKRILEAIANRLSVPNSKMITNLEKYGNTSAASIPLALDEA 295 (326)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEECCCCHHHHHHHHHHhCCCHHHhhhHHHhhCcHHHHHHHHHHHHH
Confidence 34789999999999999999999987766655543222 22 11222478999888766666544
No 104
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=94.15 E-value=0.17 Score=44.49 Aligned_cols=63 Identities=16% Similarity=0.245 Sum_probs=42.0
Q ss_pred HHHHHHHHHcCCCccccccccccCCCCCcCCHh-hhhcce----ecc-ccccccccccccchHHHHHHH
Q 045789 51 SCMEKALAKSGVAKEDVNYINAHAPSTRLGDLR-EYQALR----MNS-TKSLIGHLLGASGAAEAVATI 113 (206)
Q Consensus 51 ~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~-E~~a~~----v~s-~k~~~Gh~~~asG~~~l~~~~ 113 (206)
++++++|+++|++++||+++-.|-.....-+.+ +..-++ +.+ .-..+||+.+||=.+.|...+
T Consensus 212 ~~~~~~L~~~gl~~~did~~i~Hq~~~~~~~~~~~~lgl~~ek~~~~~~~~~~GNt~sAsipl~L~~~~ 280 (345)
T TIGR00748 212 TAAKGLMEKLGLTPEDFDYAVFHQPNGKFYLVAARMLGFPKEQVKPGLLTPRIGNTYSGATPVGLSAVL 280 (345)
T ss_pred HHHHHHHHHcCCCHHHcCEEEeCCCChHHHHHHHHHcCCCHHHeeccccccccCchhhhHHHHHHHHHH
Confidence 678899999999999999999995544333322 221111 111 125789999998777776553
No 105
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=93.90 E-value=0.049 Score=46.73 Aligned_cols=65 Identities=18% Similarity=0.291 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHHcCCCccccccccccCCCC-CcCCHhhhhc-c---eecc----ccccccccccccchHHHHHH
Q 045789 47 VGMVSCMEKALAKSGVAKEDVNYINAHAPST-RLGDLREYQA-L---RMNS----TKSLIGHLLGASGAAEAVAT 112 (206)
Q Consensus 47 ~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt-~~~D~~E~~a-~---~v~s----~k~~~Gh~~~asG~~~l~~~ 112 (206)
.....+++++|++.+++ +||+++..|-.+. ..-+..+... + .+.. .-..+||+.+++-.+.|-.+
T Consensus 223 ~~~~~~~~~~l~~~~~~-~~i~~~~~h~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~Gn~~sa~~~~~L~~~ 296 (324)
T cd00827 223 KLIAKVVRKALDRAGLS-EDIDYFVPHQPNGKKILEAVAKKLGGPPEKASQTRWILLRRVGNMYAASILLGLASL 296 (324)
T ss_pred HHHHHHHHHHHHHcccc-cccceeeccCchHHHHHHHHHHHccchHhhhccchhhHHHHhCchHHHHHHHHHHHH
Confidence 44567888999999999 9999999997776 5555444332 2 1222 34568999888776666655
No 106
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=92.96 E-value=0.14 Score=44.22 Aligned_cols=61 Identities=18% Similarity=0.174 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHcCCCccccccccccCCCCCcCCHhhhhc-ceec---cccccccccccccchHHH
Q 045789 49 MVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREYQA-LRMN---STKSLIGHLLGASGAAEA 109 (206)
Q Consensus 49 ~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~E~~a-~~v~---s~k~~~Gh~~~asG~~~l 109 (206)
+.++++++|+++|++++||+++-.|-.+...-+.+.... ++-. ..-..+||+.+|+=.+.|
T Consensus 229 ~~~~~~~~L~~~gl~~~did~~~~h~~~~~~~~~~~~~l~l~~~k~~~~l~~~Gn~~sas~~~~L 293 (326)
T PRK05963 229 MSGASQNVLASAAMTPQDIDRFFPHQANARIVDKVCETIGIPRAKAASTLETYGNSSAATIPLSL 293 (326)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEeCCCCHHHHHHHHHHcCCCHHHhhhhHHhhCcHHHHHHHHHH
Confidence 446788999999999999999999966655444332111 2211 112567898666555444
No 107
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2.3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....
Probab=92.39 E-value=0.04 Score=38.55 Aligned_cols=84 Identities=15% Similarity=0.156 Sum_probs=48.6
Q ss_pred HHHcCCCccccccccccCCCCCcCCHhhhhc-cee----ccccccccccccccchHHHHHHHHHhhhcccCCCCCCCCCC
Q 045789 57 LAKSGVAKEDVNYINAHAPSTRLGDLREYQA-LRM----NSTKSLIGHLLGASGAAEAVATIKAIQTGWIHPNLNLENPD 131 (206)
Q Consensus 57 l~~Agi~~~dI~~ve~hgtgt~~~D~~E~~a-~~v----~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~ 131 (206)
|+++|++++||+++-.|-.....-+.+.... ++- ... ..+||+.+++-.+.|..+ ++.+.+
T Consensus 1 L~~~g~~~~did~~i~hq~~~~~~~~~~~~lgi~~~~~~~~~-~~~Gn~~sa~~~~~L~~~---~~~g~~---------- 66 (90)
T PF08541_consen 1 LERAGLSPDDIDHFIPHQASKKILDSIAKRLGIPPERFPDNL-AEYGNTGSASIPINLADA---LEEGRI---------- 66 (90)
T ss_dssp HHHTT--GGGESEEEE-SSSHHHHHHHHHHHTS-GGGBE-TH-HHH-B-GGGHHHHHHHHH---HHTTSS----------
T ss_pred CccccCCHHHCCEEEeCCCCHHHHHHHHHHcCCcHHHHHHHH-hccCcchhhhHHHHHHHH---HHcCCC----------
Confidence 6889999999999999976665444422211 221 222 567999988777766554 343322
Q ss_pred CCCCCCCCCcccccccccccCCCCeEEEEEeecccceeEEEcc
Q 045789 132 KHVLSRTSGASAAFISIPVIKQFKTRFVLISFNGSFLSSLYMA 174 (206)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~n~~~vl~ 174 (206)
++..+.+..+.+.|.+-+++++|
T Consensus 67 --------------------~~Gd~vl~~~~G~G~~~~~~~~~ 89 (90)
T PF08541_consen 67 --------------------KPGDRVLLVGFGAGFSWGAAVLR 89 (90)
T ss_dssp --------------------CTTEEEEEEEEETTTEEEEEEEE
T ss_pred --------------------CCCCEEEEEEEEhhheeEEEEEE
Confidence 12244666677788888887775
No 108
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=92.37 E-value=0.066 Score=47.06 Aligned_cols=65 Identities=17% Similarity=0.078 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHc--CCCccccccccccCCCCCcCCHhhhhc-ceec------cccccccccccccchHHHHHH
Q 045789 48 GMVSCMEKALAKS--GVAKEDVNYINAHAPSTRLGDLREYQA-LRMN------STKSLIGHLLGASGAAEAVAT 112 (206)
Q Consensus 48 ~~~~~~~~al~~A--gi~~~dI~~ve~hgtgt~~~D~~E~~a-~~v~------s~k~~~Gh~~~asG~~~l~~~ 112 (206)
...++++++|+++ |++++||+++-.|-.+...-|.++..- ++-. ..-..+||+.+++=.+.|-.+
T Consensus 260 ~~~~~i~~~L~~~~~g~~~~did~~~~H~~~~~i~~~v~~~lgl~~~~~~~s~~~l~~~GN~~sasi~~~L~~~ 333 (361)
T cd00831 260 NLERVLRKLLARLGIGLFKLAFDHWCVHPGGRAVLDAVEKALGLSPEDLEASRMVLRRYGNMSSSSVLYVLAYM 333 (361)
T ss_pred HHHHHHHHHhccccCCCccccceEEEECCCChHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhccHHHHHHHH
Confidence 4566889999999 999999999999987777666554332 2211 223468999998777776655
No 109
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade. This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.
Probab=90.37 E-value=0.86 Score=40.59 Aligned_cols=66 Identities=14% Similarity=0.112 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHcCCCccccccccccCCCCCcCCHh-hhhc--ceec-------------cccccccccccccchHHHHH
Q 045789 48 GMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLR-EYQA--LRMN-------------STKSLIGHLLGASGAAEAVA 111 (206)
Q Consensus 48 ~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~-E~~a--~~v~-------------s~k~~~Gh~~~asG~~~l~~ 111 (206)
...+++++.|++.|++++||+++..|-..++..-.. +... ..+. -.-..+||+.++|=.+.|..
T Consensus 206 ~~~~~~~~~l~~~g~~~~did~~i~H~p~~~~~~k~~~~~l~~~~~~~~~~~~~~~~~s~~~~~~~GN~~sas~~l~L~~ 285 (379)
T TIGR01835 206 AFENAWNDYAKRTGLSLADFAAFCFHVPFTKMGLKALRHILKKNYEDEDESVQNAYLESIIYNREVGNLYTGSLYLGLAS 285 (379)
T ss_pred HHHHHHHHHHHHhCCCHHHcCEEEECCCCCcHHHHHHHHHHhhcccccHHHHHHHhhhhhhhhhhcCchHhHHHHHHHHH
Confidence 345788888999999999999999997544432111 1100 0000 12347899998887777765
Q ss_pred HH
Q 045789 112 TI 113 (206)
Q Consensus 112 ~~ 113 (206)
++
T Consensus 286 ~l 287 (379)
T TIGR01835 286 LL 287 (379)
T ss_pred HH
Confidence 53
No 110
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]
Probab=88.94 E-value=2.4 Score=37.87 Aligned_cols=107 Identities=20% Similarity=0.237 Sum_probs=64.1
Q ss_pred CceEEEEEEccchHHHhcCCceeEEEEEEEe-cCCCCC----CCCCCC--C--------hHHHHHHHHHHHHHcCCCccc
Q 045789 2 GEGAGVLLLEELEHAKKRGTNIYAEILDGSL-TCDAYH----ITAPHP--E--------GVGMVSCMEKALAKSGVAKED 66 (206)
Q Consensus 2 gEGa~alvL~~~~~A~~~g~~i~a~I~g~~~-~~dg~~----~~~~~~--~--------~~~~~~~~~~al~~Agi~~~d 66 (206)
|.|++|+|+..- ..+.+.+.+... ..|-.. ...+.| + ......+.+..+++.|++++|
T Consensus 156 GAGavA~lIg~n-------~~~~a~~~~~~syt~d~~DFwRp~~~~yp~~dg~~s~~~Y~~~~~~a~~~~~~k~gls~~d 228 (377)
T COG3425 156 GAGAVAFLIGKN-------PPIVAEFEGTGSYTTDTPDFWRPDGQPYPYVDGRFSEPAYFKHVENAAKGYMEKTGLSPDD 228 (377)
T ss_pred CCceEEEEEccC-------CCeEEEecCceEEecCCCcccccCCCcccccCceecHHHHHHHHHHHHHHHHHHhCCChhh
Confidence 789999999852 345555544432 333221 111112 1 234456677777889999999
Q ss_pred cccccccCCCCCcCCHhhhh------cceeccccc-cccccccccchHHHHHHHHH
Q 045789 67 VNYINAHAPSTRLGDLREYQ------ALRMNSTKS-LIGHLLGASGAAEAVATIKA 115 (206)
Q Consensus 67 I~~ve~hgtgt~~~D~~E~~------a~~v~s~k~-~~Gh~~~asG~~~l~~~~l~ 115 (206)
.+|+..|-.-++..-..-.. .+.-+-.-+ ++|++..+|..++|+.++-.
T Consensus 229 fdy~vfH~P~~k~~~ka~k~l~~~~e~v~~~l~~~~~vGN~YtgS~~L~Las~L~~ 284 (377)
T COG3425 229 FDYIVFHQPNGKFPKKAAKSLGFKEEQVKPGLVYPQRIGNTYTGSLLLGLASLLDN 284 (377)
T ss_pred hCeEEecCCCCchHHHHHHHhCccHhhcCccchhhhhcCcccchhHHHHHHHHHhh
Confidence 99999998766532211110 011222223 68999999999999887643
No 111
>PLN03173 chalcone synthase; Provisional
Probab=87.88 E-value=0.41 Score=42.96 Aligned_cols=66 Identities=15% Similarity=0.086 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHHcCCCccccccccccCCCCCcCCHhhhhc-ceec------cccccccccccccchHHHHHH
Q 045789 47 VGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREYQA-LRMN------STKSLIGHLLGASGAAEAVAT 112 (206)
Q Consensus 47 ~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~E~~a-~~v~------s~k~~~Gh~~~asG~~~l~~~ 112 (206)
..+...+++.|++.|++.+||+++-.|=.|...-|.++..- ++-. .+-..+|++.+++=+.-|-+.
T Consensus 277 ~~~~~~i~~~L~~~gl~~~di~~~v~Hqgg~~Il~~v~~~LgL~~ekl~~s~~vl~~yGNtSSaSv~~vL~~~ 349 (391)
T PLN03173 277 KNVEKSLTEAFKPLGISDWNSLFWIAHPGGPAILDQVEAKLALKPEKLRATRHVLSEYGNMSSACVLFILDEM 349 (391)
T ss_pred HHHHHHHHHHHHhcCCCccccCeEEECCCcHHHHHHHHHHcCCChHHHHHHHHHHHHhCcchhhHHHHHHHHH
Confidence 44566889999999999999999999988877777665543 2211 123457888877655555544
No 112
>PLN03170 chalcone synthase; Provisional
Probab=87.85 E-value=0.45 Score=42.83 Aligned_cols=66 Identities=17% Similarity=0.117 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHHcCCCccccccccccCCCCCcCCHhhhhc-ceec------cccccccccccccchHHHHHH
Q 045789 47 VGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREYQA-LRMN------STKSLIGHLLGASGAAEAVAT 112 (206)
Q Consensus 47 ~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~E~~a-~~v~------s~k~~~Gh~~~asG~~~l~~~ 112 (206)
..+.++++++|+++|++.+||+++-.|=-|...-|.++..- ++-. .+-..+||+.+++=+..|-+.
T Consensus 281 ~~i~~~v~~~L~~~gl~~~di~~~v~Hqgg~~il~~v~~~Lgl~~~~~~~s~~~l~~~GNtsSasv~~vL~~~ 353 (401)
T PLN03170 281 KNIERSLEEAFKPLGITDYNSIFWVAHPGGPAILDQVEAKVGLEKERMRATRHVLSEYGNMSSACVLFILDEM 353 (401)
T ss_pred HHHHHHHHHHHHhcCCCccccCeEEecCCcHHHHHHHHHHcCCChHHHHHHHHHHHHhCccHHhHHHHHHHHH
Confidence 34556889999999999999999999977776666655433 2211 123467888888666655554
No 113
>PLN03169 chalcone synthase family protein; Provisional
Probab=86.96 E-value=0.76 Score=41.15 Aligned_cols=65 Identities=14% Similarity=0.107 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHHcCCCccccc--cccccCCCCCcCCHhhhhc-ceecc------ccccccccccccchHHHHH
Q 045789 47 VGMVSCMEKALAKSGVAKEDVN--YINAHAPSTRLGDLREYQA-LRMNS------TKSLIGHLLGASGAAEAVA 111 (206)
Q Consensus 47 ~~~~~~~~~al~~Agi~~~dI~--~ve~hgtgt~~~D~~E~~a-~~v~s------~k~~~Gh~~~asG~~~l~~ 111 (206)
..+..+++++|+++|++++||+ ++-.|=.+...-|.++..- ++-.. +-..+||+.+++=.+.|-+
T Consensus 281 ~~~~~~i~~~L~~~gl~~~did~~~~v~Hq~n~~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtsSasip~~L~~ 354 (391)
T PLN03169 281 DNIEGFCKKLMKKAGLVEKDYNDLFWAVHPGGPAILNRLEKKLKLAPEKLECSRRALMDYGNVSSNTIVYVLEY 354 (391)
T ss_pred HHHHHHHHHHHHHcCCCCCCCCcceEEecCCCHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchHhHHHHHHHH
Confidence 3445678999999999999898 8888866665555554332 22211 2246788888765555543
No 114
>PRK08256 lipid-transfer protein; Provisional
Probab=86.37 E-value=2.3 Score=37.91 Aligned_cols=95 Identities=13% Similarity=0.003 Sum_probs=54.2
Q ss_pred EEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCcccccccccc-CCCCCcCCHhhhhcceecccccccccccccc
Q 045789 26 EILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAH-APSTRLGDLREYQALRMNSTKSLIGHLLGAS 104 (206)
Q Consensus 26 ~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~h-gtgt~~~D~~E~~a~~v~s~k~~~Gh~~~as 104 (206)
.|.|++.+.-+... .......-..+++++||+++|++++|||.+... ..+...........+-+.......=...+++
T Consensus 4 ~IvG~~~t~~~~~~-~~~~~~~La~~A~~~Al~dAGl~~~dID~~~~g~~~~~~~~~~~~~~~lGl~~~~~~~v~~~caS 82 (391)
T PRK08256 4 FVAGVGMTPFEKPG-ASWDYPDMAAEAGRAALADAGIDYDAVQQAYVGYVYGDSTSGQRALYEVGMTGIPIVNVNNNCST 82 (391)
T ss_pred EEEeccccccccCC-CCCCHHHHHHHHHHHHHHHcCCChHHCCeeEEEEEeCCcchhHHHHHHcCCCCCCCcccccccHH
Confidence 46777655443311 111123445678999999999999999976431 1111111111111122222222333456788
Q ss_pred chHHHHHHHHHhhhccc
Q 045789 105 GAAEAVATIKAIQTGWI 121 (206)
Q Consensus 105 G~~~l~~~~l~l~~~~i 121 (206)
|+..+..+...++.|..
T Consensus 83 g~~ai~~A~~~I~sG~~ 99 (391)
T PRK08256 83 GSTALFLARQAVRSGAA 99 (391)
T ss_pred HHHHHHHHHHHHHCCCC
Confidence 89999999999998864
No 115
>PRK06158 thiolase; Provisional
Probab=86.35 E-value=2.9 Score=37.23 Aligned_cols=93 Identities=15% Similarity=0.040 Sum_probs=52.3
Q ss_pred EEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcCCHhhhhc-ceeccccccccccccc
Q 045789 25 AEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREYQA-LRMNSTKSLIGHLLGA 103 (206)
Q Consensus 25 a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~E~~a-~~v~s~k~~~Gh~~~a 103 (206)
..|.|++...-+.... .....-..+++++||+++||+++|||.+-+... ........+.- +-+.......-...++
T Consensus 10 vaIvG~g~t~~~~~~~--~t~~eL~~eA~~~Al~dAgl~~~dID~iv~~~~-~~~~~~~~la~~lGl~~~~~~~~~~g~~ 86 (384)
T PRK06158 10 TAIVGAATAGLGEAPG--LSAMELLAQAAHRALADAGLTMADVDGLFTASP-DDALWGLSVAEYLGIRPRFVDGTMIGGS 86 (384)
T ss_pred EEEEEeeeccceeCCC--CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecC-CCCCcHHHHHHHcCCCCeeeccccCccH
Confidence 4588888765544311 111345577999999999999999998765321 11111111110 1121111112234566
Q ss_pred cchHHHHHHHHHhhhcc
Q 045789 104 SGAAEAVATIKAIQTGW 120 (206)
Q Consensus 104 sG~~~l~~~~l~l~~~~ 120 (206)
+|+..+..+...++.|.
T Consensus 87 s~~~al~~A~~~I~sG~ 103 (384)
T PRK06158 87 SFLAHLLPAALALEAGL 103 (384)
T ss_pred HHHHHHHHHHHHHHcCC
Confidence 77777778888887764
No 116
>PRK05790 putative acyltransferase; Provisional
Probab=86.14 E-value=2.5 Score=37.74 Aligned_cols=95 Identities=16% Similarity=0.066 Sum_probs=52.7
Q ss_pred EEEEEEEecCCCCCCCC--CCCChHHHHHHHHHHHHHcCCCccccccccccCCCCC--c-CCHh-hhh-cceecc-cccc
Q 045789 25 AEILDGSLTCDAYHITA--PHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTR--L-GDLR-EYQ-ALRMNS-TKSL 96 (206)
Q Consensus 25 a~I~g~~~~~dg~~~~~--~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~--~-~D~~-E~~-a~~v~s-~k~~ 96 (206)
..|.|++.+.-++.... ......-..+++++||+++||+++|||.+-. |+.++ . .... ... ...+.. ....
T Consensus 4 v~IvG~~~tp~~r~~g~~~~~~~~~La~~A~~~AL~dAgl~~~dID~vi~-g~~~~~~~~~~~~~~~~~~~gl~~~~~~~ 82 (393)
T PRK05790 4 VVIVSAARTPIGKFGGALKDVSAVELGAIVIKAALERAGVPPEQVDEVIM-GQVLQAGAGQNPARQAALKAGLPVEVPAL 82 (393)
T ss_pred eEEEeeecCCccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCeEEE-EEecCCCCCCcHHHHHHHHcCCCCCCcee
Confidence 34778776654442211 1112344577899999999999999998753 22111 1 1111 110 011110 1112
Q ss_pred ccccccccchHHHHHHHHHhhhcc
Q 045789 97 IGHLLGASGAAEAVATIKAIQTGW 120 (206)
Q Consensus 97 ~Gh~~~asG~~~l~~~~l~l~~~~ 120 (206)
.=+..+++|+..+..+...++.|.
T Consensus 83 ~v~~~Casg~~al~~A~~~I~sG~ 106 (393)
T PRK05790 83 TINKVCGSGLKAVALAAQAIRAGD 106 (393)
T ss_pred eecccchHHHHHHHHHHHHHHcCC
Confidence 223457788888888888888774
No 117
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=85.30 E-value=2.7 Score=38.12 Aligned_cols=94 Identities=14% Similarity=-0.004 Sum_probs=56.1
Q ss_pred EEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcCC----Hhhhhc--ceecccccccc
Q 045789 25 AEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGD----LREYQA--LRMNSTKSLIG 98 (206)
Q Consensus 25 a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D----~~E~~a--~~v~s~k~~~G 98 (206)
..|.|++.+.-+........ -.-..+++++||+++||+++|||.+-+. +.....+ .-+..+ +-+.......-
T Consensus 18 VaIvG~g~Tpfgr~~~~~~~-~eL~~eA~~~Al~dagl~~~dID~vv~~-~~~~~~~g~~~~~~~~~~~lGl~~~~~~~v 95 (430)
T PRK06365 18 VYMVAAGVTKFDKASPYMDF-RERVKKAFDYAMNDAGLTLADIDGSVAS-YFSDHFQRQLLAGIMVQDYLGLVPKPSKRI 95 (430)
T ss_pred EEEEEeeecCccccCCCCCH-HHHHHHHHHHHHHHcCCCHHHcCEEEEe-cccccccccchhhHHHHHhcCCCCCceEEE
Confidence 45888887655542111111 2455778999999999999999986542 2111111 111111 22222222333
Q ss_pred ccccccchHHHHHHHHHhhhcc
Q 045789 99 HLLGASGAAEAVATIKAIQTGW 120 (206)
Q Consensus 99 h~~~asG~~~l~~~~l~l~~~~ 120 (206)
...++||+..+..+...++.|.
T Consensus 96 ~~~~aSg~~ai~~A~~~I~sG~ 117 (430)
T PRK06365 96 EGGGATGGLAFQAGYEEIASGR 117 (430)
T ss_pred eCCcHHHHHHHHHHHHHHHcCC
Confidence 4568899999999999998874
No 118
>PLN03172 chalcone synthase family protein; Provisional
Probab=85.26 E-value=1.1 Score=40.22 Aligned_cols=65 Identities=17% Similarity=0.100 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHHcCCCccccccccccCCCCCcCCHhhhhc-ceecc------ccccccccccccchHHHHH
Q 045789 47 VGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREYQA-LRMNS------TKSLIGHLLGASGAAEAVA 111 (206)
Q Consensus 47 ~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~E~~a-~~v~s------~k~~~Gh~~~asG~~~l~~ 111 (206)
..+...+++.|++.|++..||++|-.|=.|...-|.++..- ++-.. +-..+|++.+++=+.-|-+
T Consensus 277 ~~i~~~~~~~L~~~gl~~~di~~~~~Hqgg~~Il~~v~~~Lgl~~~~~~~s~~vl~~yGNtSSaSv~~vL~~ 348 (393)
T PLN03172 277 KNIEKSLVEAFAPIGINDWNSIFWIAHPGGPAILDQVEIKLDLKEEKLRATRHVLSDYGNMSSACVLFILDE 348 (393)
T ss_pred HHHHHHHHHHhhhcCCCccccceEEecCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCccHHhHHHHHHHH
Confidence 44556788899999999999999999988877777776543 22111 2335688877754444443
No 119
>PRK06065 acetyl-CoA acetyltransferase; Provisional
Probab=84.94 E-value=2.7 Score=37.71 Aligned_cols=94 Identities=17% Similarity=0.208 Sum_probs=54.5
Q ss_pred EEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcCC---Hhhhhcceecc-cccccc-c
Q 045789 25 AEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGD---LREYQALRMNS-TKSLIG-H 99 (206)
Q Consensus 25 a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D---~~E~~a~~v~s-~k~~~G-h 99 (206)
..|.|++...-+.... .....-..++++++|+++||+++|||.+-+..+...... ..+..+-.++. .++.+- +
T Consensus 11 vaIvG~g~t~~~~~~~--~~~~~L~~~A~~~Al~dagl~~~dID~~i~~~~~~~~~~~~~~a~~l~~~lG~~~~~~~~V~ 88 (392)
T PRK06065 11 VAVIGAGLTLFRRRLL--ETPQELAWEAASKALDEAGLELKDIDCVVIGSAPDAFDGVHMKGEYLSHGSGGIRKPVSRVY 88 (392)
T ss_pred eEEEEecccCCcCCCC--CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCcccccccHHHHHHHHcCCCCCCeEEEe
Confidence 3488888765544311 111344477999999999999999998765322111111 11111111111 132221 2
Q ss_pred cccccchHHHHHHHHHhhhcc
Q 045789 100 LLGASGAAEAVATIKAIQTGW 120 (206)
Q Consensus 100 ~~~asG~~~l~~~~l~l~~~~ 120 (206)
..+++|...+..+...++.|.
T Consensus 89 ~~gasG~~al~~A~~~I~sG~ 109 (392)
T PRK06065 89 VGGATGVMTAIAGWYHVASGL 109 (392)
T ss_pred cCchhHHHHHHHHHHHHhCCC
Confidence 347888888888999898884
No 120
>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=84.11 E-value=5 Score=35.05 Aligned_cols=69 Identities=22% Similarity=0.175 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHcCCCccccccc---cccCCCCCcCCHhhhhcceeccccc--cccccccccchHHHHHHHHHhh
Q 045789 49 MVSCMEKALAKSGVAKEDVNYI---NAHAPSTRLGDLREYQALRMNSTKS--LIGHLLGASGAAEAVATIKAIQ 117 (206)
Q Consensus 49 ~~~~~~~al~~Agi~~~dI~~v---e~hgtgt~~~D~~E~~a~~v~s~k~--~~Gh~~~asG~~~l~~~~l~l~ 117 (206)
..++.++||+.+++.|+||+.| .+.|..++.-|.-=+..+.+..... -++-..+++|+.+|..+.--++
T Consensus 80 ~v~a~r~aL~~~~l~pedId~vv~vtsTG~~~Ps~dari~~~Lgl~p~~~Rvpv~glGCaaga~glara~~y~r 153 (356)
T COG3424 80 GVDALRRALDGSPLRPEDIDAVVTVTSTGLATPSLDARIVGELGLSPDTRRVPVWGLGCAAGAAGLARARDYCR 153 (356)
T ss_pred HHHHHHHHhccCCCCHHHCcEEEEEeeccccCCChhHHHHhhcCCCCccceeeeecchhhhhhhHHHHHHHHHh
Confidence 3578899999999999999964 4567777777765555444322221 2344555666666665544333
No 121
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=84.05 E-value=2.3 Score=37.96 Aligned_cols=96 Identities=11% Similarity=0.015 Sum_probs=54.3
Q ss_pred EEEEEEEecCCCCCCC-CC-CCChHHHHHHHHHHHHHcCCCccccccccc-cC--CCCCcCCHhhh---hcceecccccc
Q 045789 25 AEILDGSLTCDAYHIT-AP-HPEGVGMVSCMEKALAKSGVAKEDVNYINA-HA--PSTRLGDLREY---QALRMNSTKSL 96 (206)
Q Consensus 25 a~I~g~~~~~dg~~~~-~~-~~~~~~~~~~~~~al~~Agi~~~dI~~ve~-hg--tgt~~~D~~E~---~a~~v~s~k~~ 96 (206)
..|.|.+.+--+.... .. .....-..++++++|+++||+++|||.+-. +. .+...+-.-+. ..++.+.....
T Consensus 4 v~Ivg~~rTp~gr~~g~~~~~~~~~L~~~a~~~al~dagi~~~dID~vi~g~~~~~~~~~~~a~~~~~~~Gl~~~~p~~~ 83 (388)
T PRK06366 4 VYIVSAKRTAIGKFGRSFSKIKAPQLGGAAIKAVIDDAKLDPALVQEVIMGNVIQAGVGQNPAGQAAYHAGLPFGVTKYT 83 (388)
T ss_pred EEEEEcccCCcccCCCcccCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCccCcHHHHHHHHCCCCCCCccee
Confidence 3467776655444221 11 112345577999999999999999998753 11 11111101111 11221111122
Q ss_pred ccccccccchHHHHHHHHHhhhccc
Q 045789 97 IGHLLGASGAAEAVATIKAIQTGWI 121 (206)
Q Consensus 97 ~Gh~~~asG~~~l~~~~l~l~~~~i 121 (206)
+ +..++||+..+..+...++.|..
T Consensus 84 v-~~~caSg~~av~~Aa~~I~sG~~ 107 (388)
T PRK06366 84 V-NVVCASGMLAVESAAREIMLGER 107 (388)
T ss_pred e-echhhHHHHHHHHHHHHHhcCCC
Confidence 2 24689999999999999988853
No 122
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=83.89 E-value=4.2 Score=36.42 Aligned_cols=93 Identities=17% Similarity=0.025 Sum_probs=54.7
Q ss_pred EEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcCCHhhhh-cceeccccccccccccc
Q 045789 25 AEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREYQ-ALRMNSTKSLIGHLLGA 103 (206)
Q Consensus 25 a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~E~~-a~~v~s~k~~~Gh~~~a 103 (206)
..|.|++.+.-+.+... . ...-..+++++||++|||+++|||.+-..+..... +...+. .+-+......-.+..++
T Consensus 7 vaIvG~g~t~~~~~~~~-~-~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~~~~-~~~~~~~~lGl~~~~~~~v~~gg~ 83 (388)
T PRK08142 7 AYIVGAYEHPTRKAPDK-S-VAQLHAEVAKGALADAGLSLADVDGYFCAGDAPGL-GPASMVDYLGLKLRHVDSTETGGS 83 (388)
T ss_pred EEEEEEeeccceeCCCC-C-HHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCCCc-cHHHHHHhCCCCCeeeccccCCcH
Confidence 34888887765543211 1 13556789999999999999999986542111111 111111 12222111222345678
Q ss_pred cchHHHHHHHHHhhhcc
Q 045789 104 SGAAEAVATIKAIQTGW 120 (206)
Q Consensus 104 sG~~~l~~~~l~l~~~~ 120 (206)
+|...+..+...++.|.
T Consensus 84 s~~~a~~~A~~~I~sG~ 100 (388)
T PRK08142 84 SYLAHVGHAAQAIAAGK 100 (388)
T ss_pred HHHHHHHHHHHHHHcCC
Confidence 88888888888888874
No 123
>PRK06059 lipid-transfer protein; Provisional
Probab=83.69 E-value=2.4 Score=37.91 Aligned_cols=92 Identities=21% Similarity=0.066 Sum_probs=53.5
Q ss_pred EEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCc--CCHhh--hhc--ceecccccccc
Q 045789 25 AEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRL--GDLRE--YQA--LRMNSTKSLIG 98 (206)
Q Consensus 25 a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~--~D~~E--~~a--~~v~s~k~~~G 98 (206)
..|.|++.+.-++.. .....-..+++++||+++||+++|||+|-. ++.... ..... ..+ +-+.......=
T Consensus 6 v~Ivg~~~t~~~r~~---~~~~~La~~A~~~Al~dAgl~~~dId~vi~-~~~~~~~~~~~~~a~~va~~lG~~~~~~~~v 81 (399)
T PRK06059 6 VYILGAGMHPWGKWG---RDFVEYGVVAARAALADAGLDWRDVQLVVG-ADTIRNGYPGFVAGATFAQALGWNGAPVSSS 81 (399)
T ss_pred EEEEEecccccCCCC---CCHHHHHHHHHHHHHHHcCCCHHHCCEEEE-EeccCCccCCccHHHHHHHHhCCCCCceecc
Confidence 457787766544321 122455678999999999999999998763 221111 11111 111 22222222223
Q ss_pred ccccccchHHHHHHHHHhhhcc
Q 045789 99 HLLGASGAAEAVATIKAIQTGW 120 (206)
Q Consensus 99 h~~~asG~~~l~~~~l~l~~~~ 120 (206)
+..+++|+..|..+...++.|.
T Consensus 82 ~~~Casg~~al~~A~~~I~sG~ 103 (399)
T PRK06059 82 YAACASGSQALQSARAQILAGL 103 (399)
T ss_pred cchhHHHHHHHHHHHHHHHCCC
Confidence 4566777888888888887764
No 124
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI. This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.
Probab=83.51 E-value=3.2 Score=37.74 Aligned_cols=101 Identities=15% Similarity=0.017 Sum_probs=58.1
Q ss_pred hcCCceeEEEEEEEecCCCCC-CCCCCCC-hHHHHHHHHHHHHHcCCCcccccccccc-CCCCCc-CCHhhhhcceeccc
Q 045789 18 KRGTNIYAEILDGSLTCDAYH-ITAPHPE-GVGMVSCMEKALAKSGVAKEDVNYINAH-APSTRL-GDLREYQALRMNST 93 (206)
Q Consensus 18 ~~g~~i~a~I~g~~~~~dg~~-~~~~~~~-~~~~~~~~~~al~~Agi~~~dI~~ve~h-gtgt~~-~D~~E~~a~~v~s~ 93 (206)
+.|.++| |.|.+.+--+.. ....+.+ ..-...+++++|++++|+++|||.+..- ..+... .......++..+-.
T Consensus 4 ~~~~~V~--Ivg~~rTpfgk~~g~~~~~~~~~L~~~a~~~al~~agl~~~~Id~vi~G~~~~~~~~~~~ar~~~l~aGl~ 81 (430)
T TIGR02446 4 RQGERIA--IVAGLRTPFARQATAFHGIPAVDLGKMVVSELLARSEIDPKLIEQLVFGQVVQMPEAPNIAREIVLGTGMN 81 (430)
T ss_pred CcCCCEE--EEecccCccccCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCcCccchHHHHHHHhCCCC
Confidence 3456554 788776655543 2222233 3344779999999999999999976542 211110 11222211111111
Q ss_pred ---cccccccccccchHHHHHHHHHhhhcc
Q 045789 94 ---KSLIGHLLGASGAAEAVATIKAIQTGW 120 (206)
Q Consensus 94 ---k~~~Gh~~~asG~~~l~~~~l~l~~~~ 120 (206)
....=+..++||+..+..+...++.|.
T Consensus 82 ~~~p~~~V~~~CaSG~~A~~~a~~~I~sG~ 111 (430)
T TIGR02446 82 VHTDAYSVTRACATSFQSAVNVAESIMAGA 111 (430)
T ss_pred CCCchhhhhhhhhHHHHHHHHHHHHHHCCC
Confidence 111113458999999999999998774
No 125
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=82.48 E-value=3.7 Score=37.20 Aligned_cols=95 Identities=19% Similarity=0.088 Sum_probs=53.9
Q ss_pred EEEEEEEecCCCCCCCCC--CCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcCCH-hh--hhcceecc----ccc
Q 045789 25 AEILDGSLTCDAYHITAP--HPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDL-RE--YQALRMNS----TKS 95 (206)
Q Consensus 25 a~I~g~~~~~dg~~~~~~--~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~-~E--~~a~~v~s----~k~ 95 (206)
.+|.|.+.+.-+...+.. .....-..++++++|+++|++++|||+|-.. +.+..++. .. ..+..++- ...
T Consensus 5 v~Ivg~~rTp~g~~~g~~~~~~~~~L~~~A~~~Al~dAgl~~~dID~vi~g-~~~~~~~~~~~a~~v~~~lGl~~~~p~~ 83 (426)
T PRK08170 5 VYIVDGARTPFLKARGGPGPFSASDLAVAAGRALLNRQPFAPDDLDEVILG-CAMPSPDEANIARVVALRLGCGEKVPAW 83 (426)
T ss_pred EEEEecCCCCccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEE-eccCCCCcChHHHHHHHHhCcCCCceee
Confidence 347777766555432211 1224455779999999999999999987642 22222221 10 01111111 111
Q ss_pred cccccccccchHHHHHHHHHhhhccc
Q 045789 96 LIGHLLGASGAAEAVATIKAIQTGWI 121 (206)
Q Consensus 96 ~~Gh~~~asG~~~l~~~~l~l~~~~i 121 (206)
.+ +..+++|+..+..+...++.|..
T Consensus 84 ~v-~~~CaSg~~al~~A~~~I~sG~~ 108 (426)
T PRK08170 84 TV-QRNCASGMQALDSAAANIALGRA 108 (426)
T ss_pred ec-cchhhHHHHHHHHHHHHHHCCCC
Confidence 11 23378889999999888887743
No 126
>PLN03171 chalcone synthase-like protein; Provisional
Probab=82.37 E-value=1.5 Score=39.47 Aligned_cols=64 Identities=19% Similarity=0.166 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHH---------cCCCccccccccccCCCCCcCCHhhhhc-ceecc------ccccccccccccchHHHH
Q 045789 47 VGMVSCMEKALAK---------SGVAKEDVNYINAHAPSTRLGDLREYQA-LRMNS------TKSLIGHLLGASGAAEAV 110 (206)
Q Consensus 47 ~~~~~~~~~al~~---------Agi~~~dI~~ve~hgtgt~~~D~~E~~a-~~v~s------~k~~~Gh~~~asG~~~l~ 110 (206)
..+.+.+++++++ +|++++||+++ .|=.+-..-|.++..- ++-.- +-..+|++.+++=...|-
T Consensus 279 ~~i~~~l~~~l~~~l~~~~~~~~g~~~~di~~~-~Hq~~~~il~~v~~~Lgl~~ek~~~s~~~l~~yGNtssaSip~~L~ 357 (399)
T PLN03171 279 GLIGDNIERCLLDAFAPLLGGDGGAEWNDLFWA-VHPGSSAILDQVDAALGLEPEKLAASRRVLSDYGNMFGATVIFALD 357 (399)
T ss_pred HHHHHHHHHHHHHHHHhhcccccCCCcccceEE-EcCCcHHHHHHHHHHcCCCHHHhHHHHHHHHHhCcchhhhHHHHHH
Confidence 3444455666654 58889999988 6866555555443332 22211 224578888765444444
Q ss_pred H
Q 045789 111 A 111 (206)
Q Consensus 111 ~ 111 (206)
.
T Consensus 358 ~ 358 (399)
T PLN03171 358 E 358 (399)
T ss_pred H
Confidence 3
No 127
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=79.56 E-value=5 Score=35.82 Aligned_cols=93 Identities=20% Similarity=0.220 Sum_probs=51.1
Q ss_pred EEEEEEecCC-CCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC---CHhhhhcceecc-ccccc-cc
Q 045789 26 EILDGSLTCD-AYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG---DLREYQALRMNS-TKSLI-GH 99 (206)
Q Consensus 26 ~I~g~~~~~d-g~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~---D~~E~~a~~v~s-~k~~~-Gh 99 (206)
.|.|++.... +.... .++ ..-..+++++||++|||+++|||.+-...+..... ......+-.++- .+..+ =+
T Consensus 6 ~IvG~g~t~~~~~~~~-~s~-~eL~~eAa~~Al~dAgl~~~dID~iv~~~~~~~~~~~~~~~~~va~~LGl~~~~~~~v~ 83 (386)
T PRK08313 6 AVLGTGQTKYVAKRQD-VSM-AGLVREAIDRALADAGLTWDDIDAVVVGKAPDFFEGVMMPELFLADALGATGKPLIRVH 83 (386)
T ss_pred EEEEeecCCcCccCCC-CCH-HHHHHHHHHHHHHHcCCCHHHCCEEEEeccccccccccCchHHHHHhcCCCCCceEEEe
Confidence 4788877654 33211 111 35567899999999999999999876432111110 011111111121 12211 13
Q ss_pred cccccchHHHHHHHHHhhhcc
Q 045789 100 LLGASGAAEAVATIKAIQTGW 120 (206)
Q Consensus 100 ~~~asG~~~l~~~~l~l~~~~ 120 (206)
..+++|...+..+...++.|.
T Consensus 84 ~~casg~~al~~A~~~I~sG~ 104 (386)
T PRK08313 84 TAGSVGGSTAVVAASLVQSGV 104 (386)
T ss_pred ccCHHHHHHHHHHHHHHHCCC
Confidence 346677778888888887763
No 128
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=79.56 E-value=7.4 Score=34.59 Aligned_cols=94 Identities=11% Similarity=0.008 Sum_probs=52.9
Q ss_pred EEEEEEecCCCCCCCCC--CCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcC----CHhhhhcc--eecccccc-
Q 045789 26 EILDGSLTCDAYHITAP--HPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG----DLREYQAL--RMNSTKSL- 96 (206)
Q Consensus 26 ~I~g~~~~~dg~~~~~~--~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~----D~~E~~a~--~v~s~k~~- 96 (206)
.|.|++.+.-+...... .+...-..++++++|+++||+++|||.+-+ |+....+ .......+ -+...+..
T Consensus 5 ~Ivg~~~Tpf~~~~~~~~~~~~~~L~~~a~~~al~dagl~~~~ID~vv~-g~~~~~~~~~~~~~~~~~l~~gl~~~~p~~ 83 (382)
T PRK07801 5 YIVDAVRTPVGKRKGGLAGVHPADLGAHVLKGLVDRTGIDPAAVDDVIF-GCVDTIGPQAGNIARTSWLAAGLPEEVPGV 83 (382)
T ss_pred EEEecccCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEE-EeeccCCcccccHHHHHHHHcCCCCCCcee
Confidence 46777655444322111 122445577999999999999999998764 2211111 11111111 11111111
Q ss_pred ccccccccchHHHHHHHHHhhhcc
Q 045789 97 IGHLLGASGAAEAVATIKAIQTGW 120 (206)
Q Consensus 97 ~Gh~~~asG~~~l~~~~l~l~~~~ 120 (206)
.=+..++||+..+..++..++.|.
T Consensus 84 ~v~~acaSg~~Av~~Aa~~I~sG~ 107 (382)
T PRK07801 84 TVDRQCGSSQQAIHFAAQAVMSGT 107 (382)
T ss_pred eecchhhhHHHHHHHHHHHHHCCC
Confidence 112357889999999999998775
No 129
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=79.33 E-value=4.7 Score=36.13 Aligned_cols=91 Identities=20% Similarity=0.141 Sum_probs=54.0
Q ss_pred EEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCC-----Cc-CC-Hhhhhcceeccccccc
Q 045789 25 AEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPST-----RL-GD-LREYQALRMNSTKSLI 97 (206)
Q Consensus 25 a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt-----~~-~D-~~E~~a~~v~s~k~~~ 97 (206)
..|.|++.+.-+.... .....-..++++++|+++||+++|||.+-. |+.. .. +. ..+. +-+.......
T Consensus 9 v~IvG~g~tp~~~~~~--~~~~~L~~ea~~~AL~dagl~~~dID~v~v-g~~~~~~~~~~~~~~~a~~--lGl~~~~~~~ 83 (398)
T PRK06157 9 VAILGMGCTKFGERWD--AGAEDLMVEAFLEALADAGIEPKDIDAAWF-GTHYDEIGSGKSGTPLSRA--LRLPNIPVTR 83 (398)
T ss_pred eEEEEeccccccccCC--CCHHHHHHHHHHHHHHHcCCCHHHCCEEEE-EeccccccccchhHHHHHH--cCCCCCCEEE
Confidence 4577877654443211 112455678999999999999999998754 2211 10 00 1111 2222222222
Q ss_pred cccccccchHHHHHHHHHhhhcc
Q 045789 98 GHLLGASGAAEAVATIKAIQTGW 120 (206)
Q Consensus 98 Gh~~~asG~~~l~~~~l~l~~~~ 120 (206)
=+..+++|+..+..++..++.|.
T Consensus 84 v~~~c~sg~~ai~~A~~~I~sG~ 106 (398)
T PRK06157 84 VENFCATGSEAFRGAVYAVASGA 106 (398)
T ss_pred EecccHHHHHHHHHHHHHHHCCC
Confidence 34567889999999999998774
No 130
>PRK07855 lipid-transfer protein; Provisional
Probab=79.22 E-value=8.2 Score=34.49 Aligned_cols=90 Identities=20% Similarity=0.095 Sum_probs=53.4
Q ss_pred EEEEEEEecCCCCCCCCCCCC-hHHHHHHHHHHHHHcCCCccccccccccCCCCCcCCHhhhh-cceecccccc-ccccc
Q 045789 25 AEILDGSLTCDAYHITAPHPE-GVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREYQ-ALRMNSTKSL-IGHLL 101 (206)
Q Consensus 25 a~I~g~~~~~dg~~~~~~~~~-~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~E~~-a~~v~s~k~~-~Gh~~ 101 (206)
..|.|++.+.-+... ..+ ..-..+++++||++|||+++|||.+-..... ......+. .+-+...+.. -=+..
T Consensus 6 v~IvG~g~t~~~r~~---~~~~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~--~~~~~~l~~~lGl~~~~~~~~v~~g 80 (386)
T PRK07855 6 AAIVGIGATEFSKNS---GRSELRLACEAVLAALDDAGLAPSDVDGLVTFTMD--TNPEIAVARALGIGELKFFSRIHYG 80 (386)
T ss_pred EEEEEeeecccccCC---CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecCc--cccHHHHHHHCCCCCCcceeeecCC
Confidence 348888876544431 222 3455789999999999999999977542111 11111111 1222222332 12456
Q ss_pred cccchHHHHHHHHHhhhc
Q 045789 102 GASGAAEAVATIKAIQTG 119 (206)
Q Consensus 102 ~asG~~~l~~~~l~l~~~ 119 (206)
+++|...+..+...++.|
T Consensus 81 g~sg~~~~~~A~~~I~sG 98 (386)
T PRK07855 81 GGAACATVQQAAMAVATG 98 (386)
T ss_pred cHHHHHHHHHHHHHHHCC
Confidence 788888888888888776
No 131
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=78.86 E-value=4.6 Score=35.92 Aligned_cols=92 Identities=13% Similarity=0.108 Sum_probs=52.4
Q ss_pred EEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCCcCC---H-hhhhc-ceecccccccccc
Q 045789 26 EILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGD---L-REYQA-LRMNSTKSLIGHL 100 (206)
Q Consensus 26 ~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D---~-~E~~a-~~v~s~k~~~Gh~ 100 (206)
.|.|++...-+.... .....-..++++++|+++||+++|||++-+. +.+..++ . ..+.. +-+.......=+.
T Consensus 4 ~IvG~g~t~~~~~~~--~~~~eLa~~A~~~AL~dAgi~~~dID~vi~g-~~~~~~~~~~~a~~v~~~lGl~~~~~~~v~~ 80 (385)
T PRK12578 4 AVIGVGNSKFGRRDD--VSVQELAWESIKEALNDAGVSQTDIELVVVG-STAYRGIELYPAPIVAEYSGLTGKVPLRVEA 80 (385)
T ss_pred EEEeecccceeecCC--CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEE-ecccccccCChHHHHHHHhCCCCCCeeEEec
Confidence 377777654443211 1113344679999999999999999987643 2222111 1 01100 1111111111145
Q ss_pred ccccchHHHHHHHHHhhhcc
Q 045789 101 LGASGAAEAVATIKAIQTGW 120 (206)
Q Consensus 101 ~~asG~~~l~~~~l~l~~~~ 120 (206)
.+++|+..|..+...++.|.
T Consensus 81 ~casg~~al~~A~~~I~sG~ 100 (385)
T PRK12578 81 MCATGLAASLTAYTAVASGL 100 (385)
T ss_pred cCHHHHHHHHHHHHHHHCCC
Confidence 57788888888888888874
No 132
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=78.85 E-value=8.1 Score=34.58 Aligned_cols=94 Identities=17% Similarity=0.077 Sum_probs=52.9
Q ss_pred EEEEEEEecCCCCCCC-C-CCCChHHHHHHHHHHHHHcCCCccccccccc-cCC--CCCcCCHhhhhcceeccc--cc--
Q 045789 25 AEILDGSLTCDAYHIT-A-PHPEGVGMVSCMEKALAKSGVAKEDVNYINA-HAP--STRLGDLREYQALRMNST--KS-- 95 (206)
Q Consensus 25 a~I~g~~~~~dg~~~~-~-~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~-hgt--gt~~~D~~E~~a~~v~s~--k~-- 95 (206)
..|.|++.+--+.... . ......-..++++++|+++||+++|||.+.+ +.. +......-+ .+..++-. ++
T Consensus 3 v~IvG~~~Tp~g~~~~~~~~~~~~~L~~~a~~~al~dAgl~~~~ID~vv~g~~~~~~~~~~~~~~-~~~~~Gl~~~~p~~ 81 (394)
T PLN02644 3 VCIVGVARTPIGGFLGSLSSLSATELGSIAIQAALERAGVDPALVQEVFFGNVLSANLGQAPARQ-AALGAGLPPSTICT 81 (394)
T ss_pred EEEEeeccCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCcCCcCCcHHHH-HHHhcCCCCCCceE
Confidence 3467776554443211 1 1122455678999999999999999998754 211 111111101 11111110 11
Q ss_pred cccccccccchHHHHHHHHHhhhcc
Q 045789 96 LIGHLLGASGAAEAVATIKAIQTGW 120 (206)
Q Consensus 96 ~~Gh~~~asG~~~l~~~~l~l~~~~ 120 (206)
.+ +..++||+..+..+..+++.|.
T Consensus 82 ~v-~~~caSg~~av~~Aa~~I~sG~ 105 (394)
T PLN02644 82 TV-NKVCASGMKAVMLAAQSIQLGI 105 (394)
T ss_pred EE-eccchHHHHHHHHHHHHHHcCC
Confidence 12 3468899999999999888773
No 133
>PRK07937 lipid-transfer protein; Provisional
Probab=78.83 E-value=7.8 Score=34.27 Aligned_cols=92 Identities=13% Similarity=0.112 Sum_probs=50.4
Q ss_pred EEEEEEecCCCCCCCCCCCC-hHHHHHHHHHHHHHcCCCccccccccccCCC-CCcCCHhh-hhc-ceecccc-cccccc
Q 045789 26 EILDGSLTCDAYHITAPHPE-GVGMVSCMEKALAKSGVAKEDVNYINAHAPS-TRLGDLRE-YQA-LRMNSTK-SLIGHL 100 (206)
Q Consensus 26 ~I~g~~~~~dg~~~~~~~~~-~~~~~~~~~~al~~Agi~~~dI~~ve~hgtg-t~~~D~~E-~~a-~~v~s~k-~~~Gh~ 100 (206)
.|.|++.+.-+..... ... ..-..+++++||++|||+++|||.+-. +.. ...+...- ... -.++... ...-+-
T Consensus 5 aIvG~g~t~~~~~~~~-~~~~~el~~eA~~~Al~DAgl~~~dID~~~~-~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~v 82 (352)
T PRK07937 5 AVVGFAQAPHVRRTDG-TTNGVEMLMPCFAELYAELGITKSDIGFWCS-GSSDYLAGRAFSFISAIDSIGAVPPINESHV 82 (352)
T ss_pred EEEEeeccccccCCCC-CCcHHHHHHHHHHHHHHHcCCCHHHCCEEEE-EccccccccccchhhHHhhccCCCCCceEEe
Confidence 4788887655443110 112 355688999999999999999998832 221 11111000 000 1122211 111122
Q ss_pred ccccchHHHHHHHHHhhhcc
Q 045789 101 LGASGAAEAVATIKAIQTGW 120 (206)
Q Consensus 101 ~~asG~~~l~~~~l~l~~~~ 120 (206)
+ ++|...+..+...++.|.
T Consensus 83 ~-~~g~~a~~~A~~aI~sG~ 101 (352)
T PRK07937 83 E-MDAAWALYEAWVKLLTGE 101 (352)
T ss_pred c-CcHHHHHHHHHHHHhcCC
Confidence 2 357888888888888874
No 134
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=78.77 E-value=7.9 Score=34.40 Aligned_cols=75 Identities=15% Similarity=0.107 Sum_probs=43.6
Q ss_pred hHHHHHHHHHHHHHcCCCcccccccccc-CCCCCcCCHhhh-hcceecc---ccccccccccccchHHHHHHHHHhhhcc
Q 045789 46 GVGMVSCMEKALAKSGVAKEDVNYINAH-APSTRLGDLREY-QALRMNS---TKSLIGHLLGASGAAEAVATIKAIQTGW 120 (206)
Q Consensus 46 ~~~~~~~~~~al~~Agi~~~dI~~ve~h-gtgt~~~D~~E~-~a~~v~s---~k~~~Gh~~~asG~~~l~~~~l~l~~~~ 120 (206)
..-..++++++|+++|++++|||++-.. .++...+...-. .+..++- .....=+..+++|+..+..+...++.|.
T Consensus 23 ~~La~~A~~~AL~dAgl~~~dID~vi~~~~~~~~~~~~~a~~v~~~lGl~~~~~~~~v~~~c~s~~~al~~A~~~I~sG~ 102 (386)
T cd00751 23 DDLGAAVIKALLERAGLDPEEVDDVIMGNVLQAGEGQNPARQAALLAGLPESVPATTVNRVCGSGLQAVALAAQSIAAGE 102 (386)
T ss_pred HHHHHHHHHHHHHhcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCchhhhccccHHHHHHHHHHHHHHHCCC
Confidence 3445679999999999999999987642 111111111111 1112221 1111124457788888888888887774
No 135
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....
Probab=77.64 E-value=3.1 Score=34.65 Aligned_cols=69 Identities=22% Similarity=0.168 Sum_probs=41.4
Q ss_pred HHHHHHHHHHcCCCcccccccc---ccCCCCCcCCHhhhhc--ceeccccccccccccccchHHHHHHHHHhhh
Q 045789 50 VSCMEKALAKSGVAKEDVNYIN---AHAPSTRLGDLREYQA--LRMNSTKSLIGHLLGASGAAEAVATIKAIQT 118 (206)
Q Consensus 50 ~~~~~~al~~Agi~~~dI~~ve---~hgtgt~~~D~~E~~a--~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~ 118 (206)
.++.++||+++|++++||+.+. +-|..+|.-|..=... ++-.-....+++...++|+.+|-.+.-..+.
T Consensus 105 ~~Aa~~AL~~~g~~~~dIthlv~vs~TG~~~PglD~~l~~~LgL~~~v~R~~i~~~GC~gg~~~L~~A~~~~~~ 178 (226)
T PF00195_consen 105 EEAARKALAEAGLDPSDITHLVTVSCTGIAAPGLDARLINRLGLRPDVQRTPIFGMGCAGGAAGLRRAKDIARA 178 (226)
T ss_dssp HHHHHHHHHHHTS-GGGECEEEEEESSSSECS-HHHHHHHHHT--TTSEEEEEES-GGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCcccceEEEEecCCcCCCchhHHHHhcCCCCCCcEEEEEeccchhhHHHHHHHHHHHHhC
Confidence 4688899999999999999744 4455566555433322 2223333456777777777777655554444
No 136
>PLN00415 3-ketoacyl-CoA synthase
Probab=77.33 E-value=3.1 Score=38.26 Aligned_cols=72 Identities=8% Similarity=0.121 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHHcCCCccccccccccCCCC---CcCCHhhhhcceec-cccc-cccccccccchHHHHHHHHHhhh
Q 045789 47 VGMVSCMEKALAKSGVAKEDVNYINAHAPST---RLGDLREYQALRMN-STKS-LIGHLLGASGAAEAVATIKAIQT 118 (206)
Q Consensus 47 ~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt---~~~D~~E~~a~~v~-s~k~-~~Gh~~~asG~~~l~~~~l~l~~ 118 (206)
..+..+++++|+++|++|+|||++-...++. +.-|..=...+.+. .++. .++....++|+.+|-.+--.++.
T Consensus 136 m~i~~A~~~aL~~aGi~p~dID~LIvs~T~~~~~Pslaa~l~~~LGLr~~v~~~dL~gmGCsggv~aL~lA~~ll~a 212 (466)
T PLN00415 136 LVIFGALNSLFKKTGIEPREVGIFIVNCSLFNPNPSLSSMIVNRYKLKTDVKTYNLSGMGCSAGAISVDLATNLLKA 212 (466)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEECcCCCCCchHHHHHHHHhCCCCCceEEEeccccchHHHHHHHHHHHHHHh
Confidence 3445588899999999999999876665543 11111111113332 3322 44555566666666666555554
No 137
>TIGR02845 spore_V_AD stage V sporulation protein AD. Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.
Probab=76.66 E-value=2.1 Score=37.58 Aligned_cols=67 Identities=19% Similarity=0.222 Sum_probs=43.5
Q ss_pred CceEEEEEEccchHHHhcCCce----eEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCC
Q 045789 2 GEGAGVLLLEELEHAKKRGTNI----YAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAP 75 (206)
Q Consensus 2 gEGa~alvL~~~~~A~~~g~~i----~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgt 75 (206)
++|++++||++.. .+-+| .+.|..+++..-.+-. ....++-...|.+=|++-|.+|+|-|.|-.-..
T Consensus 160 gdGAGA~vl~~~~----~~~~i~~~t~gkv~d~g~~d~~nmg---aamapaa~dti~~h~~d~~~~~~~yd~i~tgdl 230 (327)
T TIGR02845 160 VTGAGAVLLASTG----GGPRITSATIGKVVDYGITDPLDMG---AAMAPAAADTIEAHFKDTGRSVDDYDLIVTGDL 230 (327)
T ss_pred EcccEEEEEeecC----CCCceEEEEEEEEEecCCCCcccch---hhhhHHHHHHHHHHHHHcCCChhhccEEEecch
Confidence 7899999998753 23333 2345555543221111 222446678899999999999999999985443
No 138
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=76.41 E-value=11 Score=34.97 Aligned_cols=95 Identities=17% Similarity=0.068 Sum_probs=54.7
Q ss_pred EEEEEEecCCCCCCCCC-CCChHHHHHHHHHHHHHcCCC--ccccccccccCC-CCCcCCHhhhhc--ceeccccccccc
Q 045789 26 EILDGSLTCDAYHITAP-HPEGVGMVSCMEKALAKSGVA--KEDVNYINAHAP-STRLGDLREYQA--LRMNSTKSLIGH 99 (206)
Q Consensus 26 ~I~g~~~~~dg~~~~~~-~~~~~~~~~~~~~al~~Agi~--~~dI~~ve~hgt-gt~~~D~~E~~a--~~v~s~k~~~Gh 99 (206)
+|.|++....+...... .....-..+++++||++||++ ++|||.+-+-.. +....+.....+ +-+........+
T Consensus 7 ~IVGvG~t~~~~~~~~~~~s~~~L~~eA~~~Al~DAGl~~~~~dID~v~v~~~~~~~~~~~~~~la~~lGl~p~~~~~~~ 86 (498)
T PRK08257 7 VIVGVGQVTERPDDPAYGLEPVDLMAAAARAAAADAGADAVLEAIDSVAVVNQLSWRYRDPPGLLAERLGADPARTVYSP 86 (498)
T ss_pred EEEEeeecccccCCcccCCCHHHHHHHHHHHHHHhcCCCcCHHHCCEEEEeccccccccCHHHHHHHHcCCCCcceeEec
Confidence 48898876655421111 011355678999999999999 999997653111 111222221122 222111112345
Q ss_pred cccccchHHHHHHHHHhhhcc
Q 045789 100 LLGASGAAEAVATIKAIQTGW 120 (206)
Q Consensus 100 ~~~asG~~~l~~~~l~l~~~~ 120 (206)
..+.++...+..+...+..|.
T Consensus 87 ~GG~s~~~~v~~Aa~~IasG~ 107 (498)
T PRK08257 87 VGGNSPQRLVNEAALRIAAGE 107 (498)
T ss_pred CCCHHHHHHHHHHHHHHHCCC
Confidence 567777788888988888773
No 139
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=76.37 E-value=9.3 Score=34.26 Aligned_cols=95 Identities=15% Similarity=0.037 Sum_probs=53.5
Q ss_pred EEEEEEEecCCCCC-CCCCCCC-hHHHHHHHHHHHHHcCCCccccccccccCCCCCcCC--Hhhhhc-ceecc---cccc
Q 045789 25 AEILDGSLTCDAYH-ITAPHPE-GVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGD--LREYQA-LRMNS---TKSL 96 (206)
Q Consensus 25 a~I~g~~~~~dg~~-~~~~~~~-~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D--~~E~~a-~~v~s---~k~~ 96 (206)
..|.|++.+.-+.. ....+-+ ..-..++++++|+++||+++|||+|-.- +..+.+. ...... +..+- ....
T Consensus 9 V~Ivg~~rTpf~k~~g~~~~~~~~eL~~~a~~~aL~~Agi~~~dID~vi~G-~~~~~~~~~~~~~~~~l~ag~~~~~p~~ 87 (397)
T PRK06954 9 IVIASAARTPMAAFQGEFASLTAPQLGAAAIAAAVERAGLKPEQIDEVVMG-CVLPAGQGQAPARQAALGAGLPLSVGCT 87 (397)
T ss_pred EEEEecccCCccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEE-ecCCCccchHHHHHHHHcCCCCCCccEe
Confidence 34777766554432 1111222 3445779999999999999999987532 2111111 111111 22210 1111
Q ss_pred ccccccccchHHHHHHHHHhhhcc
Q 045789 97 IGHLLGASGAAEAVATIKAIQTGW 120 (206)
Q Consensus 97 ~Gh~~~asG~~~l~~~~l~l~~~~ 120 (206)
.=+..++||+..+..+...++.|.
T Consensus 88 ~V~~aCaSG~~Av~~A~~~I~sG~ 111 (397)
T PRK06954 88 TVNKMCGSGMRAAMFAHDMLVAGS 111 (397)
T ss_pred eccccchHHHHHHHHHHHHHHCCC
Confidence 113457899999999999998775
No 140
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=75.31 E-value=7.3 Score=35.06 Aligned_cols=94 Identities=13% Similarity=0.019 Sum_probs=52.9
Q ss_pred EEEEEEecCCCCC--CCCCCC-ChHHHHHHHHHHHHHc-CCCccccccccccCCCCCcC----CHhhhhc--ceeccccc
Q 045789 26 EILDGSLTCDAYH--ITAPHP-EGVGMVSCMEKALAKS-GVAKEDVNYINAHAPSTRLG----DLREYQA--LRMNSTKS 95 (206)
Q Consensus 26 ~I~g~~~~~dg~~--~~~~~~-~~~~~~~~~~~al~~A-gi~~~dI~~ve~hgtgt~~~----D~~E~~a--~~v~s~k~ 95 (206)
.|.|++.+.-+.. ....+- ...-..++++++|+++ ||+++|||.+.. |+..+.+ ......+ +-+.....
T Consensus 5 ~IvG~~~Tpfg~~~~g~~~~~~~~eL~~~A~~~AL~da~gl~~~dID~vv~-g~~~~~~~~g~~~~~~~a~~lGl~~~p~ 83 (406)
T PRK07851 5 VIVSTARSPIGRAFKGSLKDMRPDDLAAQMVRAALDKVPALDPTDIDDLML-GCGLPGGEQGFNMARVVAVLLGYDFLPG 83 (406)
T ss_pred EEEecCCCCcccCCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEE-EcccccccccCCHHHHHHHHcCCCCCCe
Confidence 4677765543331 111111 1344567999999997 999999998753 3221111 1111111 11211222
Q ss_pred cccccccccchHHHHHHHHHhhhcc
Q 045789 96 LIGHLLGASGAAEAVATIKAIQTGW 120 (206)
Q Consensus 96 ~~Gh~~~asG~~~l~~~~l~l~~~~ 120 (206)
..=+..++||...+..+...++.|.
T Consensus 84 ~~v~~~caSG~~av~~Aa~~I~sG~ 108 (406)
T PRK07851 84 TTVNRYCSSSLQTTRMAFHAIKAGE 108 (406)
T ss_pred eeeeccchhHHHHHHHHHHHHHCCC
Confidence 2223468999999999999998874
No 141
>PLN02192 3-ketoacyl-CoA synthase
Probab=75.12 E-value=3.5 Score=38.37 Aligned_cols=70 Identities=14% Similarity=0.149 Sum_probs=40.7
Q ss_pred HHHHHHHHHHcCCCccccccccccCCC---CCcCCHhhhhcceec-cccc-cccccccccchHHHHHHHHHhhhc
Q 045789 50 VSCMEKALAKSGVAKEDVNYINAHAPS---TRLGDLREYQALRMN-STKS-LIGHLLGASGAAEAVATIKAIQTG 119 (206)
Q Consensus 50 ~~~~~~al~~Agi~~~dI~~ve~hgtg---t~~~D~~E~~a~~v~-s~k~-~~Gh~~~asG~~~l~~~~l~l~~~ 119 (206)
..+++++|+++|++|+|||++-+..+. +|.-+..=...+.+. .++. +++....++|+.++-.+--.|+.+
T Consensus 181 ~~Aa~~aL~kaGi~p~DIDiLIv~~S~~~~~PSlaa~I~n~lGlr~~i~afdLsgmGCSggl~aLdlA~~lL~a~ 255 (511)
T PLN02192 181 FGAIDQLLAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNILSYNLGGMGCSAGLISIDLAKHLLQVH 255 (511)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCchHHHHHHHHhCCCCCceEEEcccchhhhHHHHHHHHHHHHHcC
Confidence 458899999999999999998765332 111111111113332 2232 455566677777776665556543
No 142
>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=74.94 E-value=2.4 Score=36.98 Aligned_cols=84 Identities=18% Similarity=0.260 Sum_probs=55.2
Q ss_pred CCceEEEEEEccchHHHhcCCceeE---------------EEEEEEecCCCCCCCC--CCCC--hHHHHHHHHHHHHHcC
Q 045789 1 MGEGAGVLLLEELEHAKKRGTNIYA---------------EILDGSLTCDAYHITA--PHPE--GVGMVSCMEKALAKSG 61 (206)
Q Consensus 1 lgEGa~alvL~~~~~A~~~g~~i~a---------------~I~g~~~~~dg~~~~~--~~~~--~~~~~~~~~~al~~Ag 61 (206)
+|||++++|+.-...+ .+..+.. .+.||.++.+|.+... --|+ ..-+...+...|..-+
T Consensus 188 F~DG~AA~vv~gd~~~--~~~~~~~p~i~~s~StL~~dse~~Mgwdv~d~G~~~vlSrdlp~lIe~~l~~~V~~fL~~~~ 265 (356)
T COG3424 188 FGDGAAAVVVSGDRRA--EGKRPLRPDILDSFSTLYPDSEDIMGWDVGDQGLKVVLSRDLPNLIESYLAPNVTTFLATHG 265 (356)
T ss_pred ecCCeeEEEEeccccc--cccCCCCceecccccccCCccccccceeecCCcEEEEEcCchhHHHHHHhhhhHHHHHHHcC
Confidence 4899999999852221 1222211 1456777777764221 1111 2334457888999999
Q ss_pred CCccccccccccCCCCCcCCHhhhh
Q 045789 62 VAKEDVNYINAHAPSTRLGDLREYQ 86 (206)
Q Consensus 62 i~~~dI~~ve~hgtgt~~~D~~E~~ 86 (206)
+..+||+.+-+|=-|-++-|..|-.
T Consensus 266 ls~~dI~~w~~HPGG~KVida~~~s 290 (356)
T COG3424 266 LSIEDIEAWVVHPGGPKVIDAYEES 290 (356)
T ss_pred CchhhhceeeeCCCCchHHHHHHHh
Confidence 9999999999998888888877653
No 143
>PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B ....
Probab=74.84 E-value=17 Score=30.61 Aligned_cols=73 Identities=22% Similarity=0.156 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHHcCCCcccccccccc-CCCCCcCCHhhhhc-----ceeccccccccccccccchHHHHHHHHHhhhcc
Q 045789 47 VGMVSCMEKALAKSGVAKEDVNYINAH-APSTRLGDLREYQA-----LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGW 120 (206)
Q Consensus 47 ~~~~~~~~~al~~Agi~~~dI~~ve~h-gtgt~~~D~~E~~a-----~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ 120 (206)
.-...+++.+|++++|++++|+.|..- ..+...+...-..+ ++. .+....=...++||+..+..+...++.|.
T Consensus 28 ~L~~~a~~~al~~~~i~~~~Id~v~~G~~~~~~~g~~~ar~~~l~aGl~~-~vp~~~V~~~CaSG~~Av~~a~~~I~sG~ 106 (264)
T PF00108_consen 28 DLAAEAVKAALERAGIDPEDIDAVIVGNVLQEGEGQNIARQAALAAGLPE-SVPATTVNRACASGLQAVHLAAMAIASGE 106 (264)
T ss_dssp HHHHHHHHHHHHHHTSHGGGEEEEEEE-SSSCTTTCHHHHHHHHHTTS-T-TSEEEEEE-GGGHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHhcccchhhhhhcCcccccccccchhhhhhhhhhccccc-ccceeeehhhhhHHHHHHHHhhhhhcCCC
Confidence 444578999999999999999986642 22211222221211 111 11111114568999999999999999884
No 144
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=74.74 E-value=7 Score=34.97 Aligned_cols=95 Identities=13% Similarity=0.046 Sum_probs=54.3
Q ss_pred EEEEEEEecCCCCCCC-CCCCC-hHHHHHHHHHHHHHcCCCccccccccccCCCCCcCC---Hhhhhcceeccc--ccc-
Q 045789 25 AEILDGSLTCDAYHIT-APHPE-GVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGD---LREYQALRMNST--KSL- 96 (206)
Q Consensus 25 a~I~g~~~~~dg~~~~-~~~~~-~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D---~~E~~a~~v~s~--k~~- 96 (206)
++|.|.+.+.-|.... ....+ ..-..++++++|+++|++++|||.|-.. +.++.++ ..-..+..++-. ++.
T Consensus 4 v~Ivg~~rTpfgk~~g~~~~~~~~~La~~A~~~AL~~agl~~~dID~vi~g-~~~~~~~~~~~a~~va~~lGl~~~~p~~ 82 (393)
T PRK05656 4 VVIVAATRTAIGSFQGSLANIPAVELGAAVIRRLLEQTGLDPAQVDEVILG-QVLTAGAGQNPARQAAIKAGLPHSVPAM 82 (393)
T ss_pred EEEEEcccCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEE-EecCCCCCCcHHHHHHHHcCCCCCcceE
Confidence 4577877666554321 11111 3445679999999999999999987642 2211111 111011122211 111
Q ss_pred ccccccccchHHHHHHHHHhhhcc
Q 045789 97 IGHLLGASGAAEAVATIKAIQTGW 120 (206)
Q Consensus 97 ~Gh~~~asG~~~l~~~~l~l~~~~ 120 (206)
.=+..+++|+..+..+...++.|.
T Consensus 83 ~V~~~Casg~~ai~~A~~~I~sG~ 106 (393)
T PRK05656 83 TLNKVCGSGLKALHLAAQAIRCGD 106 (393)
T ss_pred EecccchhHHHHHHHHHHHHHcCC
Confidence 123557888888988888888775
No 145
>PLN02377 3-ketoacyl-CoA synthase
Probab=73.94 E-value=4.4 Score=37.71 Aligned_cols=70 Identities=10% Similarity=0.138 Sum_probs=41.2
Q ss_pred HHHHHHHHHHcCCCccccccccccCCCC---CcCCHhhhhcceec-cccc-cccccccccchHHHHHHHHHhhhc
Q 045789 50 VSCMEKALAKSGVAKEDVNYINAHAPST---RLGDLREYQALRMN-STKS-LIGHLLGASGAAEAVATIKAIQTG 119 (206)
Q Consensus 50 ~~~~~~al~~Agi~~~dI~~ve~hgtgt---~~~D~~E~~a~~v~-s~k~-~~Gh~~~asG~~~l~~~~l~l~~~ 119 (206)
..+++++|+++|++|+|||++-+..|+. |.-+..=...+-+. .++. +++...+++|+.+|-.+-..++.+
T Consensus 177 ~~A~~~aL~kaGi~p~dID~LVv~cS~~~~~PSlaa~V~~~LGlr~~v~afdL~gmGCsggl~aL~lA~~ll~~~ 251 (502)
T PLN02377 177 FGALDNLFANTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAVDLAKDMLQVH 251 (502)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhCCCCCCeEEecccchhhHHHHHHHHHHHHHHcC
Confidence 4588999999999999999987644433 21111111113332 2333 455556666777776665555554
No 146
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=73.91 E-value=14 Score=33.11 Aligned_cols=96 Identities=14% Similarity=0.050 Sum_probs=53.7
Q ss_pred EEEEEEEecCCCCCCCCC--CCChHHHHHHHHHHHHHcCCCcccccccccc-CCCCCcC-CHhhhhcceeccc--ccccc
Q 045789 25 AEILDGSLTCDAYHITAP--HPEGVGMVSCMEKALAKSGVAKEDVNYINAH-APSTRLG-DLREYQALRMNST--KSLIG 98 (206)
Q Consensus 25 a~I~g~~~~~dg~~~~~~--~~~~~~~~~~~~~al~~Agi~~~dI~~ve~h-gtgt~~~-D~~E~~a~~v~s~--k~~~G 98 (206)
.+|.|.+.+.-|...... .....-..++++++|++++|+++|||.|-.. .+....+ ......+..++-. ++.+-
T Consensus 4 v~Ivg~~rTpfgk~~g~~~~~~~~eLa~~A~~~AL~~agl~~~dID~vv~g~~~~~~~~~~~a~~va~~~Gl~~~~p~~~ 83 (404)
T PRK06205 4 AVICEPVRTPVGRFGGAFKDVPAEELAATVIRALVERTGIDPARIDDVIFGQGYPNGEAPAIGRVAALDAGLPVTVPGMQ 83 (404)
T ss_pred eEEEEeecCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCceee
Confidence 356777666555432111 1123445779999999999999999987532 1111111 1111111222211 11111
Q ss_pred -ccccccchHHHHHHHHHhhhcc
Q 045789 99 -HLLGASGAAEAVATIKAIQTGW 120 (206)
Q Consensus 99 -h~~~asG~~~l~~~~l~l~~~~ 120 (206)
...++||+..+..+...++.|.
T Consensus 84 V~~~CaSg~~Al~~A~~~I~sG~ 106 (404)
T PRK06205 84 LDRRCGSGLQAVITAAMQVQTGA 106 (404)
T ss_pred hhhhhhHHHHHHHHHHHHHHcCC
Confidence 3457888889988988888774
No 147
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=73.90 E-value=14 Score=33.12 Aligned_cols=97 Identities=11% Similarity=-0.004 Sum_probs=55.3
Q ss_pred EEEEEEEecCCCCCCC-CCCCC-hHHHHHHHHHHHHHcCCCccccccccccCCCCCcCC---Hhhhhcceecc---cccc
Q 045789 25 AEILDGSLTCDAYHIT-APHPE-GVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGD---LREYQALRMNS---TKSL 96 (206)
Q Consensus 25 a~I~g~~~~~dg~~~~-~~~~~-~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D---~~E~~a~~v~s---~k~~ 96 (206)
..|.|.+.+.-+.... ..+.+ .+-...+++++|+++|++++|||.+-.--......+ .....++..+- +...
T Consensus 4 V~Ivg~~rTpfgk~~g~~~~~~~~eL~~~a~~~aL~~agi~~~~Id~v~~G~~~~~~~q~~~~ar~~~l~~Gl~~~~p~~ 83 (387)
T PRK07850 4 PVIVEAVRTPIGKRNGWLSGLHAAELLGAVQRAVLDRAGIDPGDVEQVIGGCVTQAGEQSNNITRTAWLHAGLPYHVGAT 83 (387)
T ss_pred EEEEecccCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchHHHHHHHhCCCCCCCceE
Confidence 3467776665554221 11222 334477899999999999999997654211111111 11111111111 1121
Q ss_pred ccccccccchHHHHHHHHHhhhccc
Q 045789 97 IGHLLGASGAAEAVATIKAIQTGWI 121 (206)
Q Consensus 97 ~Gh~~~asG~~~l~~~~l~l~~~~i 121 (206)
.=+..++||+..+..+...++.|..
T Consensus 84 tV~~~CaSG~~A~~~A~~~I~sG~~ 108 (387)
T PRK07850 84 TIDCQCGSAQQANHLVAGLIAAGAI 108 (387)
T ss_pred EEecccccHHHHHHHHHHHHHCCCC
Confidence 1245589999999999999988754
No 148
>PLN02854 3-ketoacyl-CoA synthase
Probab=73.13 E-value=10 Score=35.53 Aligned_cols=63 Identities=21% Similarity=0.138 Sum_probs=42.4
Q ss_pred HHHHHHHHHHcCCCc------cccccccccCCCCCcCCHhhhhc-ce---ecccc---ccccccccccchHHHHHH
Q 045789 50 VSCMEKALAKSGVAK------EDVNYINAHAPSTRLGDLREYQA-LR---MNSTK---SLIGHLLGASGAAEAVAT 112 (206)
Q Consensus 50 ~~~~~~al~~Agi~~------~dI~~ve~hgtgt~~~D~~E~~a-~~---v~s~k---~~~Gh~~~asG~~~l~~~ 112 (206)
...+++.|.++|+++ +||+++..|-.|...-|.++..- ++ +.... ..+|++.++|=...|-.+
T Consensus 388 ~~~i~~~L~~~gl~~~~pd~~~didhf~iHqggr~IId~v~k~LgL~~~~~e~sr~tL~rfGNTSSASI~~~L~~~ 463 (521)
T PLN02854 388 VTLVRRKLLKAKVKPYIPDFKLAFEHFCIHAGGRAVLDELQKNLQLSDWHMEPSRMTLHRFGNTSSSSLWYELAYT 463 (521)
T ss_pred HHHHHHHHHHcCCCccCCcccccCcEEEECCCCHHHHHHHHHHcCCCcccccchHHHhhhcCChHhhHHHHHHHHH
Confidence 346788888999997 69999999998888888776543 33 22222 245777766544444433
No 149
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=71.91 E-value=9.4 Score=31.11 Aligned_cols=72 Identities=17% Similarity=0.151 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHHcCCCccccccccccCCCCCcCCHhhhhc------ceeccccccccccccccchHHHHHHHHHhhhcc
Q 045789 47 VGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREYQA------LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGW 120 (206)
Q Consensus 47 ~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~E~~a------~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ 120 (206)
.-..++++++|+++|++++||+.+-...+ +...+ .+..+ +.+...+...=....++++..|..+...++.|.
T Consensus 9 ~l~~~A~~~al~~ag~~~~~i~~li~~~~-~~~~~-~~~~a~~i~~~lg~~~~~~~~i~~~C~s~~~al~~A~~~i~~g~ 86 (254)
T cd00327 9 ELGFEAAEQAIADAGLSKGPIVGVIVGTT-GGSGE-FSGAAGQLAYHLGISGGPAYSVNQACATGLTALALAVQQVQNGK 86 (254)
T ss_pred HHHHHHHHHHHHHcCCCCCCceEEEEEEC-CCCcc-ccHHHHHHHHHhCCCCCCcceeccHhHHHHHHHHHHHHHHHCCC
Confidence 44577899999999999999998875433 22111 12222 223112222223555677777777777777763
No 150
>PRK09051 beta-ketothiolase; Provisional
Probab=71.90 E-value=13 Score=33.38 Aligned_cols=96 Identities=19% Similarity=0.117 Sum_probs=53.0
Q ss_pred EEEEEEEecCCCCC-CCCCCCC-hHHHHHHHHHHHHHcCCCcccccccccc-CCCCCcCCHhhh--hcceecc--ccc-c
Q 045789 25 AEILDGSLTCDAYH-ITAPHPE-GVGMVSCMEKALAKSGVAKEDVNYINAH-APSTRLGDLREY--QALRMNS--TKS-L 96 (206)
Q Consensus 25 a~I~g~~~~~dg~~-~~~~~~~-~~~~~~~~~~al~~Agi~~~dI~~ve~h-gtgt~~~D~~E~--~a~~v~s--~k~-~ 96 (206)
.+|.|.+.+--+.. ....+-+ ..-..++++++|+++||+++|||+|-+. .+.....+.... .+...+- .++ .
T Consensus 5 v~Ivg~~rtp~g~~~g~~~~~~~~eL~~~A~~~AL~~agi~~~dID~vi~g~~~~~~~~~~~~a~~~~~~~Gl~~~~p~~ 84 (394)
T PRK09051 5 VVVVSGVRTAIGTFGGSLKDVAPTDLGATVVREALARAGVDPDQVGHVVFGHVIPTEPRDMYLSRVAAINAGVPQETPAF 84 (394)
T ss_pred EEEEecccCCccCCCCcCCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEeeeccccCCCccHHHHHHHHcCCCCCCceE
Confidence 35777766554442 1111212 3445679999999999999999987642 222111111111 1111111 111 1
Q ss_pred ccccccccchHHHHHHHHHhhhcc
Q 045789 97 IGHLLGASGAAEAVATIKAIQTGW 120 (206)
Q Consensus 97 ~Gh~~~asG~~~l~~~~l~l~~~~ 120 (206)
.=+..+++|+..+..+...++.|.
T Consensus 85 ~V~~aCaSg~~Al~~A~~~I~sG~ 108 (394)
T PRK09051 85 NVNRLCGSGLQAIVSAAQAILLGD 108 (394)
T ss_pred EecccchHHHHHHHHHHHHHHcCC
Confidence 113456788888888888887775
No 151
>PLN02287 3-ketoacyl-CoA thiolase
Probab=70.96 E-value=15 Score=33.75 Aligned_cols=95 Identities=14% Similarity=0.069 Sum_probs=53.2
Q ss_pred EEEEEEEecCCCCC-CCC-CCCC-hHHHHHHHHHHHHHcCCCccccccccccCCCCCcCC--H-hh-hhcceeccc--cc
Q 045789 25 AEILDGSLTCDAYH-ITA-PHPE-GVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGD--L-RE-YQALRMNST--KS 95 (206)
Q Consensus 25 a~I~g~~~~~dg~~-~~~-~~~~-~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D--~-~E-~~a~~v~s~--k~ 95 (206)
..|.|++.+--+.. ... ..-+ ..-..++++++|+++|++++|||.|-. |+.+.... . .. ..+...+-. ++
T Consensus 48 V~IVG~grTpfgk~~~g~~~~~s~~eLa~eA~~~AL~dAgl~~~dID~vv~-G~~~~~~~~~~~~~r~~a~~~Gl~~~~p 126 (452)
T PLN02287 48 VVIVAAYRTPICKAKRGGFKDTYPDDLLAPVLKAVVEKTGLNPSEVGDIVV-GTVLAPGSQRANECRMAAFYAGFPETVP 126 (452)
T ss_pred EEEEEeecCCCccCCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE-EeecCcccccchHHHHHHHHCCCCCCcc
Confidence 44778876654431 111 1111 345577999999999999999998753 22211111 0 10 111111111 11
Q ss_pred -cccccccccchHHHHHHHHHhhhcc
Q 045789 96 -LIGHLLGASGAAEAVATIKAIQTGW 120 (206)
Q Consensus 96 -~~Gh~~~asG~~~l~~~~l~l~~~~ 120 (206)
..=+..++||+..+..+...++.|.
T Consensus 127 a~~V~~~CaSG~~Ai~~Aa~~I~sG~ 152 (452)
T PLN02287 127 VRTVNRQCSSGLQAVADVAAAIKAGF 152 (452)
T ss_pred eEEEeccCchHHHHHHHHHHHHHcCC
Confidence 1124567888999998888887763
No 152
>TIGR02714 amido_AtzD_TrzD ring-opening amidohydrolases. Members of this family are are ring-opening amidohydrolases, including cyanuric acid amidohydrolase (EC 3.5.2.15) (AtzD and TrzD) and barbiturase. Note that barbiturase does not act as defined for EC 3.5.2.1 (barbiturate + water = malonate + urea) but rather catalyzes the ring-opening of barbituric acid to ureidomalonic acid (see Soong, et al., PubMed:11485332).
Probab=70.09 E-value=5.5 Score=35.02 Aligned_cols=60 Identities=18% Similarity=0.383 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHcCC-CccccccccccCCCCCcCCHhhhhc----ceeccccccccccccccch
Q 045789 47 VGMVSCMEKALAKSGV-AKEDVNYINAHAPSTRLGDLREYQA----LRMNSTKSLIGHLLGASGA 106 (206)
Q Consensus 47 ~~~~~~~~~al~~Agi-~~~dI~~ve~hgtgt~~~D~~E~~a----~~v~s~k~~~Gh~~~asG~ 106 (206)
....+++++|+.+||| +|.||.||..-..=-......+..+ +...-.-..+|.+.+||.+
T Consensus 133 ~~vA~aV~~AM~~AGI~dpaDVH~VQvKcPlLt~~~i~~A~~RG~~~~t~dt~~SM~~SrgaSAL 197 (366)
T TIGR02714 133 TETAAAVKRAMRDAGIADPADVHFVQVKCPLLTIHTIRDAKSRGKTVWTEDTYESMGYSRGASAL 197 (366)
T ss_pred HHHHHHHHHHHHHcCCCChhHeeEEEecCcccCHHHHHHHHhcCCceeecCcccccccccchhHH
Confidence 3445689999999999 6999999997754332233333333 5554444457777777643
No 153
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=69.95 E-value=24 Score=31.67 Aligned_cols=89 Identities=11% Similarity=0.101 Sum_probs=51.1
Q ss_pred EEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcC-CCc-cccccccccCCCCC-----cCCHhhhhcceecc-ccccc
Q 045789 26 EILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSG-VAK-EDVNYINAHAPSTR-----LGDLREYQALRMNS-TKSLI 97 (206)
Q Consensus 26 ~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Ag-i~~-~dI~~ve~hgtgt~-----~~D~~E~~a~~v~s-~k~~~ 97 (206)
.|.|++.+.-+..... .....-..+++++||++|| |++ +|||.+.+ ++... ..+.. .+-.++- .|..+
T Consensus 7 aIvG~g~t~~~~~~~~-~s~~eL~~eA~~~Al~DAG~l~~~~dId~~~~-~~~~~~~~~~~~~~~--~~~~lg~~~~~~~ 82 (385)
T PRK06066 7 AIVGIGWYGFRPTTPE-VSFREMMFEAASRAYKDAGNINPRRDVDSFIS-CQEDFWEGIAIADEF--APDQIGGAMRPTM 82 (385)
T ss_pred EEEEeeecCCcCCCCC-CCHHHHHHHHHHHHHHhcCCCCChhcCCEEEE-ecCcccCcccccchh--HHHHcccCCCCeE
Confidence 4788887765432111 1114566789999999999 997 79997654 22111 11110 0011111 12221
Q ss_pred cccccccchHHHHHHHHHhhhcc
Q 045789 98 GHLLGASGAAEAVATIKAIQTGW 120 (206)
Q Consensus 98 Gh~~~asG~~~l~~~~l~l~~~~ 120 (206)
= .+++|...+..+..+++.|.
T Consensus 83 ~--v~~sg~~a~~~A~~aV~sG~ 103 (385)
T PRK06066 83 T--VAGDGLQGLAHAVMHINSGL 103 (385)
T ss_pred E--EeCcHHHHHHHHHHHHHcCC
Confidence 1 16788999999999888873
No 154
>PRK12404 stage V sporulation protein AD; Provisional
Probab=69.75 E-value=7.1 Score=34.32 Aligned_cols=72 Identities=14% Similarity=0.176 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHHHcCCCccccccccccCCCCCcCCHhhhhcceeccccccccccccccc-hHHHHHHHHHhhhccc
Q 045789 47 VGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREYQALRMNSTKSLIGHLLGASG-AAEAVATIKAIQTGWI 121 (206)
Q Consensus 47 ~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~E~~a~~v~s~k~~~Gh~~~asG-~~~l~~~~l~l~~~~i 121 (206)
.-+.+++++||+++||+++|||++-+...-.... +....+-.++ .+++|--.++|+ +..|..+.+.++.|..
T Consensus 56 ~L~~EA~~~AL~kAGI~~~DID~i~vGdL~nQ~i-pssfvar~LG--IP~~gV~gACSTg~eAL~lAa~~VaSG~A 128 (334)
T PRK12404 56 KLLEEACSRAIEKAKLRKEDIQFFLAGDLMNQIT-PTSFAARTLG--IPYLGLFGACSTSMEGLALAALIVNSGGA 128 (334)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCcC-cHHHHHHHhC--CCccceeecCHHHHHHHHHHHHHHHcCCC
Confidence 4557799999999999999999988653321100 1111111223 344555444444 5666667777777643
No 155
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=69.63 E-value=18 Score=32.47 Aligned_cols=75 Identities=15% Similarity=0.064 Sum_probs=44.8
Q ss_pred hHHHHHHHHHHHHHcCCCccccccccc-cCCCCCcCCHhhhh-cceecc---ccccccccccccchHHHHHHHHHhhhcc
Q 045789 46 GVGMVSCMEKALAKSGVAKEDVNYINA-HAPSTRLGDLREYQ-ALRMNS---TKSLIGHLLGASGAAEAVATIKAIQTGW 120 (206)
Q Consensus 46 ~~~~~~~~~~al~~Agi~~~dI~~ve~-hgtgt~~~D~~E~~-a~~v~s---~k~~~Gh~~~asG~~~l~~~~l~l~~~~ 120 (206)
..-...+++++|+++||+++|||.+.. +......+...-.. +...+- +....=+..++||+..+..+...++.|.
T Consensus 28 ~~L~~~a~~~al~~agi~~~~Id~vv~G~~~~~~~g~~~~r~~~~~~Gl~~~~p~~~V~~~CaSG~~Ai~~A~~~I~sG~ 107 (392)
T PRK06633 28 PMLAAHLIKDILQNSKIDPALVNEVILGQVITGGSGQNPARQTLIHAGIPKEVPGYTINKVCGSGLKSVALAANSIMTGD 107 (392)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcCEEEEEecCccccccHHHHHHHHHCCCCCCccchhhcchhHHHHHHHHHHHHHHHcCC
Confidence 344567999999999999999997654 22211112211111 111111 1111113568999999999999998774
No 156
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=69.09 E-value=21 Score=32.34 Aligned_cols=96 Identities=13% Similarity=-0.025 Sum_probs=53.4
Q ss_pred EEEEEEEecCCCCC-CCCCCCCh-HHHHHHHHHHHHHcCCCcccccccccc-CCCCCcC-CHhhhhcceeccc--cc-cc
Q 045789 25 AEILDGSLTCDAYH-ITAPHPEG-VGMVSCMEKALAKSGVAKEDVNYINAH-APSTRLG-DLREYQALRMNST--KS-LI 97 (206)
Q Consensus 25 a~I~g~~~~~dg~~-~~~~~~~~-~~~~~~~~~al~~Agi~~~dI~~ve~h-gtgt~~~-D~~E~~a~~v~s~--k~-~~ 97 (206)
..|.|++.+.-+.. ....+-+. .-...+++++|+++||++++||.+..- ......+ ......+...+-. ++ ..
T Consensus 7 v~Ivg~~rTpfgk~~g~l~~~~~~eL~~~a~~~al~~agl~~~~ID~vi~G~~~~~~~~~~~ar~~a~~aGl~~~~P~~t 86 (428)
T PRK08963 7 IAIVSGLRTPFAKQATAFHGIPAVDLGKMVVGELLARSEIDPELIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYS 86 (428)
T ss_pred EEEEecccCCccCCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCccHHHHHHHHHCCCCCCCccee
Confidence 44777766554432 11122222 334789999999999999999976532 1111111 1111111111111 11 11
Q ss_pred cccccccchHHHHHHHHHhhhcc
Q 045789 98 GHLLGASGAAEAVATIKAIQTGW 120 (206)
Q Consensus 98 Gh~~~asG~~~l~~~~l~l~~~~ 120 (206)
=+..++||+..+..+...++.|.
T Consensus 87 V~~aCaSG~~Ai~~Aa~~I~sG~ 109 (428)
T PRK08963 87 VSRACATSFQAVANVAESIMAGT 109 (428)
T ss_pred ehhhhHHHHHHHHHHHHHHHCCC
Confidence 13458899999999999998774
No 157
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=69.03 E-value=7.4 Score=34.09 Aligned_cols=72 Identities=14% Similarity=0.117 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHHcCCCccccccccccCCCCCcCCHhh---hhc-ceec-cc-cccccccccccchHHHHHHHHHhhhc
Q 045789 47 VGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLRE---YQA-LRMN-ST-KSLIGHLLGASGAAEAVATIKAIQTG 119 (206)
Q Consensus 47 ~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~E---~~a-~~v~-s~-k~~~Gh~~~asG~~~l~~~~l~l~~~ 119 (206)
.-..++++++|+++|++++|||++-.. +.+....+.- +.. +-+. .. .-.+.+..+++++.+|..+...++.+
T Consensus 87 ~la~~Aa~~aL~~a~~~~~~Id~li~~-s~~~~~~P~~a~~i~~~lgl~~~~~~~dv~~~~C~~~~~al~~A~~~~~~~ 164 (361)
T cd00831 87 ELAEEAARGALDEAGLRPSDIDHLVVN-TSTGNPTPSLDAMLINRLGLRPDVKRYNLGGMGCSAGAIALDLAKDLLEAN 164 (361)
T ss_pred HHHHHHHHHHHHHhCCCHHHCCEEEEE-CCCCCCCCCHHHHHHHHhCCCcccchhccccccchhHHHHHHHHHHHHHHC
Confidence 334678999999999999999987632 3332211111 100 2222 11 12343345556666666666666654
No 158
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=68.78 E-value=3 Score=36.61 Aligned_cols=27 Identities=26% Similarity=0.377 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHHcCCCcccccccccc
Q 045789 47 VGMVSCMEKALAKSGVAKEDVNYINAH 73 (206)
Q Consensus 47 ~~~~~~~~~al~~Agi~~~dI~~ve~h 73 (206)
.--.++.++||++||++|+|||+|-+-
T Consensus 54 ~la~~Aa~~AL~~Agi~~~dIDlII~a 80 (323)
T COG0332 54 DLAVEAARKALEDAGISPDDIDLIIVA 80 (323)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEE
Confidence 344679999999999999999997753
No 159
>PLN03172 chalcone synthase family protein; Provisional
Probab=67.85 E-value=6.7 Score=35.22 Aligned_cols=69 Identities=13% Similarity=0.108 Sum_probs=38.8
Q ss_pred HHHHHHHHHHcCCCcccccccc-ccCCC--CCcCCHhhhhc-ceec-cccc-cccccccccchHHHHHHHHHhhhc
Q 045789 50 VSCMEKALAKSGVAKEDVNYIN-AHAPS--TRLGDLREYQA-LRMN-STKS-LIGHLLGASGAAEAVATIKAIQTG 119 (206)
Q Consensus 50 ~~~~~~al~~Agi~~~dI~~ve-~hgtg--t~~~D~~E~~a-~~v~-s~k~-~~Gh~~~asG~~~l~~~~l~l~~~ 119 (206)
.++.++||+++|++++|||+|- +..|+ .+..| ..+.. +-+. +++. .+.+..+++++.+|-.+...++.+
T Consensus 107 ~~Aa~~aL~~ag~~~~dId~ii~~t~t~~~~P~~a-~~l~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~~~~~ 181 (393)
T PLN03172 107 KEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGAD-YQLTKLLGLKPSVKRFMMYQQGCFAGGTVLRLAKDLAENN 181 (393)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEccCCCcCchHH-HHHHHHhCCCCCceEEeeeCCchHHHHHHHHHHHHHHHcC
Confidence 4688999999999999999864 44444 22111 11111 3332 2333 344455555566665555555543
No 160
>PRK08304 stage V sporulation protein AD; Validated
Probab=67.81 E-value=3.4 Score=36.39 Aligned_cols=73 Identities=18% Similarity=0.220 Sum_probs=41.9
Q ss_pred hHHHHHHHHHHHHHcCCCccccccccccCCCCCcCCHhhhhcceecccccccccccccc-chHHHHHHHHHhhhccc
Q 045789 46 GVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREYQALRMNSTKSLIGHLLGAS-GAAEAVATIKAIQTGWI 121 (206)
Q Consensus 46 ~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~E~~a~~v~s~k~~~Gh~~~as-G~~~l~~~~l~l~~~~i 121 (206)
..-..+++++||++|||+++|||++-+...-.... .....+-.++ .+.++--.++| ++..|..+...++.|..
T Consensus 57 seLa~eAa~~ALekAGI~~~DID~lI~Gdll~Q~~-sAs~vA~~LG--IPa~dV~gACST~~~AL~lAa~lI~SG~a 130 (337)
T PRK08304 57 RKMMEDAIQQALQKANLKKSDIDYLLAGDLLNQII-SANFAARELG--IPFLGLYGACSTMMESLALGSMLIDGGFA 130 (337)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCcc-hHHHHHHHhC--CcEEEEeccCHHHHHHHHHHHHHHhcCCC
Confidence 34567899999999999999999987653311110 0000111112 13444334444 45566677777776643
No 161
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=67.81 E-value=23 Score=31.88 Aligned_cols=97 Identities=20% Similarity=0.137 Sum_probs=53.0
Q ss_pred EEEEEEEecCCCCCCC-CCCCC-hHHHHHHHHHHHHHcCCCccccccccccCC---CCCcCCHhhhhcceecc---cccc
Q 045789 25 AEILDGSLTCDAYHIT-APHPE-GVGMVSCMEKALAKSGVAKEDVNYINAHAP---STRLGDLREYQALRMNS---TKSL 96 (206)
Q Consensus 25 a~I~g~~~~~dg~~~~-~~~~~-~~~~~~~~~~al~~Agi~~~dI~~ve~hgt---gt~~~D~~E~~a~~v~s---~k~~ 96 (206)
.+|.+...+.-|...+ ..+.+ ..-...+++++|+++||+++|||.+-.--+ +.......-..+...+- +...
T Consensus 4 v~Iv~~~rTpfgk~~g~l~~~~~~eL~~~a~~~al~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Glp~~~p~~ 83 (401)
T PRK08131 4 AYIYDGLRSPFGRHAGALASVRPDDLAATVIRRLLEKSGFPGDDIEDVILGCTNQAGEDSRNVARNALLLAGLPVTVPGQ 83 (401)
T ss_pred EEEEecccCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHhcCCCCCCcee
Confidence 3466666554443211 11122 344567999999999999999998654211 11111111111111111 1111
Q ss_pred ccccccccchHHHHHHHHHhhhccc
Q 045789 97 IGHLLGASGAAEAVATIKAIQTGWI 121 (206)
Q Consensus 97 ~Gh~~~asG~~~l~~~~l~l~~~~i 121 (206)
.=+..++||+..+..+...++.|..
T Consensus 84 tV~~~CaSG~~Ai~~A~~~I~sG~~ 108 (401)
T PRK08131 84 TVNRLCASGLAAVIDAARAITCGEG 108 (401)
T ss_pred eeechhhhHHHHHHHHHHHHHCCCC
Confidence 1134688999999999999987753
No 162
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=67.78 E-value=15 Score=33.40 Aligned_cols=96 Identities=15% Similarity=0.097 Sum_probs=54.3
Q ss_pred EEEEEEEecCCCCCCC-CCCCC-hHHHHHHHHHHHHHcCCCccccccccc-cCCCCCcCCHh--hhhcce--eccccc-c
Q 045789 25 AEILDGSLTCDAYHIT-APHPE-GVGMVSCMEKALAKSGVAKEDVNYINA-HAPSTRLGDLR--EYQALR--MNSTKS-L 96 (206)
Q Consensus 25 a~I~g~~~~~dg~~~~-~~~~~-~~~~~~~~~~al~~Agi~~~dI~~ve~-hgtgt~~~D~~--E~~a~~--v~s~k~-~ 96 (206)
..|.|++.+.-+...+ ....+ ..-...+++++|++++++++|||.+.. +..+. ..+.. ...++. ++..++ .
T Consensus 9 V~Ivg~~rTpfg~~~g~l~~~~~~eL~~~a~~~al~~agl~~~~Id~vv~G~~~~~-~~~~~~~r~~~l~~gl~~~~p~~ 87 (427)
T PRK09268 9 VAILGGNRIPFARSNGAYADASNQDMLTAALDGLVDRFGLQGERLGEVVAGAVLKH-SRDFNLTRECVLGSALSPYTPAY 87 (427)
T ss_pred EEEEecCcCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccC-CccccHHHHHHHHcCCCCCCcee
Confidence 4577776654443211 11222 345567899999999999999998654 22211 11211 111111 211111 1
Q ss_pred ccccccccchHHHHHHHHHhhhccc
Q 045789 97 IGHLLGASGAAEAVATIKAIQTGWI 121 (206)
Q Consensus 97 ~Gh~~~asG~~~l~~~~l~l~~~~i 121 (206)
.=+..++||+..+..+...++.|..
T Consensus 88 ~V~~~CaSG~~ai~~A~~~I~sG~~ 112 (427)
T PRK09268 88 DLQQACGTGLEAAILVANKIALGQI 112 (427)
T ss_pred eeechhhHHHHHHHHHHHHHHCCCC
Confidence 1134578999999999999988744
No 163
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=67.64 E-value=5.7 Score=35.51 Aligned_cols=74 Identities=18% Similarity=0.156 Sum_probs=45.7
Q ss_pred hHHHHHHHHHHHHHcCCCccccccccccCCCCCcC-----CHhhh--hc-ceeccccccccccccccchHHHHHHHHHhh
Q 045789 46 GVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG-----DLREY--QA-LRMNSTKSLIGHLLGASGAAEAVATIKAIQ 117 (206)
Q Consensus 46 ~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~-----D~~E~--~a-~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~ 117 (206)
..-..++++++|+++||+++|||+|.. |+.+..+ ..... .+ +.. ......=+..+++|+..+..+...++
T Consensus 33 ~~L~~~a~~~AL~~agl~~~dID~vi~-g~~~~~~~~~~~~~~~~~l~a~~~~-~~p~~~V~~~CaSg~~ai~~A~~~I~ 110 (394)
T PRK06445 33 EELAAMLINRLIEKTGIKPEEIDDIIT-GCALQVGENWLYGGRHPIFLARLPY-NIPAMAVDRQCASSLTTVSIGAMEIA 110 (394)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCeeEE-EeecCCCcccccHHHHHHHHcCCCC-CCcchhhhhhhHHHHHHHHHHHHHHH
Confidence 345577999999999999999998763 2322211 11111 00 221 11112224567899999999999998
Q ss_pred hccc
Q 045789 118 TGWI 121 (206)
Q Consensus 118 ~~~i 121 (206)
.|..
T Consensus 111 sG~~ 114 (394)
T PRK06445 111 TGMA 114 (394)
T ss_pred cCCC
Confidence 8743
No 164
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=66.85 E-value=15 Score=32.12 Aligned_cols=74 Identities=20% Similarity=0.136 Sum_probs=43.9
Q ss_pred hHHHHHHHHHHHHHcCCCccccccccccCCCCCc---CCHhhhhc--ceeccccccccccccccchHHHHHHHHHhhhcc
Q 045789 46 GVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRL---GDLREYQA--LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGW 120 (206)
Q Consensus 46 ~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~---~D~~E~~a--~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ 120 (206)
..-..++++++|+++||+++|||.+-.. +.... ....-..+ +-+.......=...+++|+..+..+...++.|.
T Consensus 17 ~eL~~~A~~~Al~dagl~~~~Id~vi~g-~~~~~~~~~~~a~~va~~lGl~~~~~~~v~~~c~sg~~al~~Aa~~I~sG~ 95 (375)
T cd00829 17 LELAAEAARAALDDAGLEPADIDAVVVG-NAAGGRFQSFPGALIAEYLGLLGKPATRVEAAGASGSAAVRAAAAAIASGL 95 (375)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEe-cccccccccchHHHHHHHcCCCCcceeeEeCccHHHHHHHHHHHHHHHhCC
Confidence 3455778999999999999999987642 22111 11111111 112111222224457788888888888888773
No 165
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=66.53 E-value=8.4 Score=34.52 Aligned_cols=48 Identities=19% Similarity=0.194 Sum_probs=31.2
Q ss_pred EEEEEEEecCCCCCCCCCCCC-hHHHHHHHHHHHHHcCCCccccccccc
Q 045789 25 AEILDGSLTCDAYHITAPHPE-GVGMVSCMEKALAKSGVAKEDVNYINA 72 (206)
Q Consensus 25 a~I~g~~~~~dg~~~~~~~~~-~~~~~~~~~~al~~Agi~~~dI~~ve~ 72 (206)
..|.|++.+.-++.......+ ..-..+++++||+++||+++|||.|-.
T Consensus 5 v~Ivg~~~t~~~r~~~~~~~s~~eLa~eA~~~AL~dAgl~~~dID~vi~ 53 (403)
T PRK06289 5 VWVLGGYQSDFARNWTKEGRDFADLTREVVDGTLAAAGVDADDIEVVHV 53 (403)
T ss_pred EEEEeCCcCccccccCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 347777655444321111222 344478999999999999999998753
No 166
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=66.08 E-value=8 Score=34.45 Aligned_cols=72 Identities=13% Similarity=0.091 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHHHcCCCccccccccccCCCCCcCC-Hhhh--hc--ceecc--ccccccccccccchHHHHHHHHHhhhc
Q 045789 47 VGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGD-LREY--QA--LRMNS--TKSLIGHLLGASGAAEAVATIKAIQTG 119 (206)
Q Consensus 47 ~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D-~~E~--~a--~~v~s--~k~~~Gh~~~asG~~~l~~~~l~l~~~ 119 (206)
.-..+++++||+++|++++|||.+-. ++.++..+ .... .+ +-+.. ....+ ...+++|+..+..+...++.|
T Consensus 23 ~La~~A~~~Al~dAgl~~~dID~vv~-g~~~~~~~~~~~a~~va~~lGl~~~~~~~~v-~~~Casg~~al~~A~~~I~sG 100 (386)
T TIGR01930 23 DLGAAVIKELLERNPLDPELIDDVIF-GNVLQAGEQQNIARQAALLAGLPESVPAYTV-NRQCASGLQAVILAAQLIRAG 100 (386)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEE-EeccCCCCCChHHHHHHHHcCCCCCceeeee-cchhhHHHHHHHHHHHHHHCC
Confidence 44578999999999999999998764 23222111 1111 11 11211 11122 245677888888888888877
Q ss_pred c
Q 045789 120 W 120 (206)
Q Consensus 120 ~ 120 (206)
.
T Consensus 101 ~ 101 (386)
T TIGR01930 101 E 101 (386)
T ss_pred C
Confidence 4
No 167
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=65.80 E-value=9.9 Score=32.38 Aligned_cols=73 Identities=14% Similarity=0.080 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHHcCCC----ccccccccccCCCCCcCCH--------------------hhhhc------ceecccccc
Q 045789 47 VGMVSCMEKALAKSGVA----KEDVNYINAHAPSTRLGDL--------------------REYQA------LRMNSTKSL 96 (206)
Q Consensus 47 ~~~~~~~~~al~~Agi~----~~dI~~ve~hgtgt~~~D~--------------------~E~~a------~~v~s~k~~ 96 (206)
.-..++.+++|+++|++ +++|+.|. +++.+...+. ....+ +.+....-.
T Consensus 13 ~l~~~aa~~aL~~Ag~~~~~~~~~i~~ii-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~g~~~~ 91 (332)
T cd00825 13 ILGFEAAERAIADAGLSREYQKNPIVGVV-VGTGGGSPRFQVFGADAMRAVGPYVVTKAMFPGASGQIATPLGIHGPAYD 91 (332)
T ss_pred HHHHHHHHHHHHHcCCCccccCCCCEEEE-EEeCCccHHHHhhhhccccccCcchhhcccchHHHHHHHHHhCCCCCccc
Confidence 34567899999999999 89998875 3333321110 01011 222111122
Q ss_pred ccccccccchHHHHHHHHHhhhccc
Q 045789 97 IGHLLGASGAAEAVATIKAIQTGWI 121 (206)
Q Consensus 97 ~Gh~~~asG~~~l~~~~l~l~~~~i 121 (206)
+ ...+++++..|..+...++.|..
T Consensus 92 v-~~~cas~~~al~~A~~~i~~g~~ 115 (332)
T cd00825 92 V-SAACAGSLHALSLAADAVQNGKQ 115 (332)
T ss_pred c-ccHhHHHHHHHHHHHHHHHcCCC
Confidence 2 25567778888888888888854
No 168
>PLN03173 chalcone synthase; Provisional
Probab=65.73 E-value=7.6 Score=34.83 Aligned_cols=22 Identities=18% Similarity=0.237 Sum_probs=19.5
Q ss_pred HHHHHHHHHHcCCCcccccccc
Q 045789 50 VSCMEKALAKSGVAKEDVNYIN 71 (206)
Q Consensus 50 ~~~~~~al~~Agi~~~dI~~ve 71 (206)
.+++++||+++|++++|||+|-
T Consensus 107 ~~Aa~~AL~~ag~~~~dId~li 128 (391)
T PLN03173 107 KEAAAKAIKEWGQPKSKITHLV 128 (391)
T ss_pred HHHHHHHHHHcCCCHHHCCEEE
Confidence 3689999999999999999864
No 169
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=65.53 E-value=8.3 Score=32.77 Aligned_cols=73 Identities=22% Similarity=0.094 Sum_probs=42.1
Q ss_pred hHHHHHHHHHHHHHcCCCccccccccccCCCCCcC----CHhhhhc-ceecc-ccccccccccccchHHHHHHHHHhhhc
Q 045789 46 GVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG----DLREYQA-LRMNS-TKSLIGHLLGASGAAEAVATIKAIQTG 119 (206)
Q Consensus 46 ~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~----D~~E~~a-~~v~s-~k~~~Gh~~~asG~~~l~~~~l~l~~~ 119 (206)
..-..++++++|+++|++++|||++- .++.++.. ....+.. +.+.. ..-.+. ..+++|+..|..+...++.|
T Consensus 51 ~~la~~A~~~al~~ag~~~~~Id~li-~~~~~~~~~~~~~~~~l~~~lg~~~~~~~~v~-~~C~s~~~al~~A~~~i~~g 128 (320)
T cd00830 51 SDLAVEAAKKALEDAGIDADDIDLII-VATSTPDYLFPATACLVQARLGAKNAAAFDIN-AACSGFLYGLSTAAGLIRSG 128 (320)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEE-EEcCCCCCCCCcHHHHHHHHhCCCCCcEeecc-ccchHHHHHHHHHHHHHHcC
Confidence 34557799999999999999999874 33333211 1111111 22211 111222 44567777777777777766
Q ss_pred c
Q 045789 120 W 120 (206)
Q Consensus 120 ~ 120 (206)
.
T Consensus 129 ~ 129 (320)
T cd00830 129 G 129 (320)
T ss_pred C
Confidence 3
No 170
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=65.35 E-value=8.6 Score=33.19 Aligned_cols=27 Identities=26% Similarity=0.448 Sum_probs=22.9
Q ss_pred hHHHHHHHHHHHHHcCCCccccccccc
Q 045789 46 GVGMVSCMEKALAKSGVAKEDVNYINA 72 (206)
Q Consensus 46 ~~~~~~~~~~al~~Agi~~~dI~~ve~ 72 (206)
..-..++++++|+++|++++|||++-.
T Consensus 62 ~~la~~Aa~~aL~~ag~~~~~Id~li~ 88 (338)
T PRK09258 62 SDGAIAAGRKALAEAGIDPSDIGLLIN 88 (338)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 345577999999999999999999764
No 171
>PLN03170 chalcone synthase; Provisional
Probab=65.26 E-value=6.8 Score=35.24 Aligned_cols=27 Identities=15% Similarity=0.245 Sum_probs=21.4
Q ss_pred HHHHHHHHHHcCCCcccccccc-ccCCC
Q 045789 50 VSCMEKALAKSGVAKEDVNYIN-AHAPS 76 (206)
Q Consensus 50 ~~~~~~al~~Agi~~~dI~~ve-~hgtg 76 (206)
.++.++||+++|++++|||++- +..||
T Consensus 111 ~~Aa~~AL~~ag~~~~dId~lI~~T~Tg 138 (401)
T PLN03170 111 KAAAQKAIKEWGQPKSKITHLVFCTTSG 138 (401)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEccCC
Confidence 4688999999999999999754 44444
No 172
>KOG2708 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones]
Probab=65.11 E-value=6.5 Score=33.10 Aligned_cols=24 Identities=25% Similarity=0.544 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHcCCCccccccccc
Q 045789 49 MVSCMEKALAKSGVAKEDVNYINA 72 (206)
Q Consensus 49 ~~~~~~~al~~Agi~~~dI~~ve~ 72 (206)
....++++|++|+++++|||+|.-
T Consensus 53 il~Lv~~al~ea~v~~~diD~icy 76 (336)
T KOG2708|consen 53 ILGLVKQALEEAGVTSDDIDCICY 76 (336)
T ss_pred HHHHHHHHHHHcCCChhhCCEEEE
Confidence 456889999999999999998873
No 173
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=64.85 E-value=9.6 Score=32.59 Aligned_cols=73 Identities=21% Similarity=0.165 Sum_probs=39.8
Q ss_pred hHHHHHHHHHHHHHcCCCccccccccc-cCCCCCcCC-Hh-hhhc-ceeccccccccc-cccccchHHHHHHHHHhhhc
Q 045789 46 GVGMVSCMEKALAKSGVAKEDVNYINA-HAPSTRLGD-LR-EYQA-LRMNSTKSLIGH-LLGASGAAEAVATIKAIQTG 119 (206)
Q Consensus 46 ~~~~~~~~~~al~~Agi~~~dI~~ve~-hgtgt~~~D-~~-E~~a-~~v~s~k~~~Gh-~~~asG~~~l~~~~l~l~~~ 119 (206)
..-..++++++|+++|++++|||++-. +.+...... .. .+.. +.+.. ...+.. ..+++|+..|..+...++.|
T Consensus 54 ~~la~~A~~~al~~ag~~~~~Id~li~~~~~~~~~~~~~a~~l~~~lg~~~-~~~~~v~~~C~~~~~al~~A~~~l~~g 131 (325)
T PRK12879 54 SDLAIKAAERALARAGLDAEDIDLIIVATTTPDYLFPSTASQVQARLGIPN-AAAFDINAACAGFLYGLETANGLITSG 131 (325)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHhCCCC-CcEEEECccchHHHHHHHHHHHHHHcC
Confidence 345577999999999999999998753 222111111 11 1100 22211 122222 34456667777777777665
No 174
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=64.59 E-value=9.5 Score=32.56 Aligned_cols=74 Identities=11% Similarity=0.075 Sum_probs=41.1
Q ss_pred hHHHHHHHHHHHHHcCCCccccccccccCCCCCcCCH--hhhhcceeccc-ccccc-ccccccchHHHHHHHHHhhhc
Q 045789 46 GVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDL--REYQALRMNST-KSLIG-HLLGASGAAEAVATIKAIQTG 119 (206)
Q Consensus 46 ~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~--~E~~a~~v~s~-k~~~G-h~~~asG~~~l~~~~l~l~~~ 119 (206)
..-..++++++|+++|++++||+.+-...+......+ .-..+-.++.. ...+. ...+++|+..|..+...++.|
T Consensus 52 ~~la~~A~~~al~~agl~~~~Id~~i~~~~~~~~~~~~~a~~l~~~lGl~~~~~~~v~~~C~s~~~al~~A~~~i~~g 129 (318)
T TIGR00747 52 STMGFEAAKRAIENAGISKDDIDLIIVATTTPDHAFPSAACMVQAYLGIKGIPAFDLSAACAGFIYALSVAKQYIESG 129 (318)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCChHHHHHHHHhCCCCCcEeehhhhhHHHHHHHHHHHHHHHcC
Confidence 3455779999999999999999987643221111111 00011112211 12222 234566777777777777765
No 175
>PF09663 Amido_AtzD_TrzD: Amidohydrolase ring-opening protein (Amido_AtzD_TrzD); InterPro: IPR014086 Members of this family are ring-opening amidohydrolases, including cyanuric acid amidohydrolase (3.5.2.15 from EC) (AtzD and TrzD) and barbiturase. Note that barbiturase does not act as defined for 3.5.2.1 from EC (barbiturate + water = malonate + urea) but rather catalyses the ring opening of barbiturase acid to ureidomalonic acid [].; GO: 0016812 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
Probab=64.56 E-value=8.2 Score=34.06 Aligned_cols=59 Identities=19% Similarity=0.316 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHHcCC-CccccccccccCCCCCcCCHhhhhc----ceeccccccccccccccc
Q 045789 47 VGMVSCMEKALAKSGV-AKEDVNYINAHAPSTRLGDLREYQA----LRMNSTKSLIGHLLGASG 105 (206)
Q Consensus 47 ~~~~~~~~~al~~Agi-~~~dI~~ve~hgtgt~~~D~~E~~a----~~v~s~k~~~Gh~~~asG 105 (206)
....+++++++.+||| +|.||.||..-..=-......+..+ +.....-..+|...+||.
T Consensus 132 ~~vA~aV~~aM~~AGI~dpaDVH~VQvKcPLLT~~~i~~A~~RG~~~~t~dt~~SM~~SrgASA 195 (365)
T PF09663_consen 132 EEVAAAVRAAMADAGITDPADVHFVQVKCPLLTSERIADAKARGKTVATEDTYESMAYSRGASA 195 (365)
T ss_pred HHHHHHHHHHHHHcCCCChhheeeEEecCCcCCHHHHHHHHhCCCceeecccccccccccchhH
Confidence 4456789999999999 7999999997643221111112222 444444445677777653
No 176
>TIGR02845 spore_V_AD stage V sporulation protein AD. Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.
Probab=64.52 E-value=4.3 Score=35.61 Aligned_cols=70 Identities=17% Similarity=0.249 Sum_probs=41.7
Q ss_pred hHHHHHHHHHHHHHcCCCccccccccccCCCCCcCCHh--hhhcceeccccccccccccc-cchHHHHHHHHHhhhcc
Q 045789 46 GVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLR--EYQALRMNSTKSLIGHLLGA-SGAAEAVATIKAIQTGW 120 (206)
Q Consensus 46 ~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~--E~~a~~v~s~k~~~Gh~~~a-sG~~~l~~~~l~l~~~~ 120 (206)
..-..+++++||++||++++|||++-+..+ .+..+ ...+-.++- +.++--.++ +++..|..+...++.|.
T Consensus 51 ~eLa~eAa~~ALekAGL~~~DID~IIvGdl---~~Q~~~As~vA~~LGI--P~fdV~~ACSTf~~AL~lAa~lI~SG~ 123 (327)
T TIGR02845 51 RKLMEDAVNLALKKANLKKDDVDFFLAGDL---LNQIITANFVARDLGI--PFLGLYGACSTSMETLALGAMLVDGGF 123 (327)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEeCC---CCcccHHHHHHHHhCC--CEEEEeccCHHHHHHHHHHHHHHhCCC
Confidence 345678999999999999999999876422 11111 111111221 334433444 44666667777777764
No 177
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=64.41 E-value=12 Score=32.33 Aligned_cols=72 Identities=19% Similarity=0.113 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHHcCCCccccccccccCCCCCc---CCHhhhhc-ceeccccccccc-cccccchHHHHHHHHHhhhcc
Q 045789 47 VGMVSCMEKALAKSGVAKEDVNYINAHAPSTRL---GDLREYQA-LRMNSTKSLIGH-LLGASGAAEAVATIKAIQTGW 120 (206)
Q Consensus 47 ~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~---~D~~E~~a-~~v~s~k~~~Gh-~~~asG~~~l~~~~l~l~~~~ 120 (206)
.-..++++++|+++|++++|||++... +.++. +....... +-+.. +..+-. ..+++|+..|..+...++.|.
T Consensus 53 ~la~~A~~~aL~~ag~~~~dId~vi~~-s~~~~~~~~~~~~v~~~Lg~~~-~~~~~v~~~Casg~~al~~A~~~i~sg~ 129 (326)
T CHL00203 53 KLAAEAANKALDKAHMDPLEIDLIILA-TSTPDDLFGSASQLQAEIGATR-AVAFDITAACSGFILALVTATQFIQNGS 129 (326)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEE-eCCCCCCCchHHHHHHHhCCCC-CceeeecccchhHHHHHHHHHHHHHcCC
Confidence 445679999999999999999998743 32221 12222211 22211 111222 234566777777777777664
No 178
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=64.31 E-value=11 Score=33.52 Aligned_cols=72 Identities=11% Similarity=0.060 Sum_probs=40.7
Q ss_pred hHHHHHHHHHHHHHcCCCccccccccccCCCCC-cCCHh---hhhc-ceeccccc-cccccccccchHHHHHHHHHhhhc
Q 045789 46 GVGMVSCMEKALAKSGVAKEDVNYINAHAPSTR-LGDLR---EYQA-LRMNSTKS-LIGHLLGASGAAEAVATIKAIQTG 119 (206)
Q Consensus 46 ~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~-~~D~~---E~~a-~~v~s~k~-~~Gh~~~asG~~~l~~~~l~l~~~ 119 (206)
..-..++++++|+++|++++|||++... +.++ ...+. .+.. +.+..... .+ ...+++|+..|..+...++.|
T Consensus 64 ~~La~~A~~~aL~~agi~~~dId~li~~-s~~~~~~~p~~a~~v~~~Lgl~~~~~~~v-~~~Cas~~~al~~A~~~i~sg 141 (378)
T PRK06816 64 AQMAAEAIRDLLDDAGFSLGDIELLACG-TSQPDQLMPGHASMVHGELGAPPIEVVSS-AGVCAAGMMALKYAYLSVKAG 141 (378)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEE-ECCCCcCChHHHHHHHhhCCCCCCceeee-cCcCHHHHHHHHHHHHHHHCC
Confidence 3455778999999999999999987542 2221 11111 1111 22111111 22 334667777777776767665
No 179
>PLN02854 3-ketoacyl-CoA synthase
Probab=64.15 E-value=9.1 Score=35.82 Aligned_cols=67 Identities=12% Similarity=0.210 Sum_probs=39.7
Q ss_pred HHHHHHHHHHcCCCccccccccccCCCCCcCCHhhhhc------ceec-cccc-cccccccccchHHHHHHHHHhhhc
Q 045789 50 VSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREYQA------LRMN-STKS-LIGHLLGASGAAEAVATIKAIQTG 119 (206)
Q Consensus 50 ~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~E~~a------~~v~-s~k~-~~Gh~~~asG~~~l~~~~l~l~~~ 119 (206)
..+++++|+++|++|+|||++-+.-++. .+.=..+ +.+. .++. +++...+++|+.+|-.+--.|+.+
T Consensus 193 ~~~~~~lL~kaGi~p~dID~LIv~cS~~---~p~PSlAa~I~n~LGlr~~i~afdLsgmGCSggl~aL~lA~~lL~~~ 267 (521)
T PLN02854 193 FGALDSLFSKTGVKPRDIGILIVNCSLF---NPTPSLSAMIVNHYKLRTDIKSYNLGGMGCSAGLISIDLANDLLKAN 267 (521)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCCC---CCCCCHHHHHHHHhCCCCCceEEecccchhhhHHHHHHHHHHHHHhC
Confidence 3477899999999999999987643322 1111111 2222 2222 445556666677776666666654
No 180
>PLN03168 chalcone synthase; Provisional
Probab=63.94 E-value=5.6 Score=35.65 Aligned_cols=64 Identities=16% Similarity=0.073 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHcCCCccccccccccCCCCCcCCHhhhhc-ceec------cccccccccccccchHHHHH
Q 045789 48 GMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREYQA-LRMN------STKSLIGHLLGASGAAEAVA 111 (206)
Q Consensus 48 ~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~E~~a-~~v~------s~k~~~Gh~~~asG~~~l~~ 111 (206)
.+..+++++++..++...|++++-.|=-|...-|.++..- ++-. .+-..+|++-+|+=+..|-+
T Consensus 277 ~~~~~l~~~l~~~~~~~~d~~~~v~Hqgg~~Il~~v~~~Lgl~~ek~~~s~~vl~~yGNtSSaSv~~vL~~ 347 (389)
T PLN03168 277 NIEKFLNEARKCVGSPDWNEMFWAVHPGGPAILDQVEAKLKLTKDKMQGSRDILSEFGNMSSASVLFVLDQ 347 (389)
T ss_pred HHHHHHHHHHHhcCCCccccceEEecCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCccHhhhHHHHHHH
Confidence 3456777778888888778888889988877777776544 2211 12346788887765555443
No 181
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=63.42 E-value=22 Score=32.11 Aligned_cols=73 Identities=16% Similarity=0.200 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHHcCCCccccccccccCCCCCcCCH----hhhhcceecc---ccccccccccccchHHHHHHHHHhhhc
Q 045789 47 VGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDL----REYQALRMNS---TKSLIGHLLGASGAAEAVATIKAIQTG 119 (206)
Q Consensus 47 ~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~----~E~~a~~v~s---~k~~~Gh~~~asG~~~l~~~~l~l~~~ 119 (206)
.-...+++++|+++||+++|||+|-. |+.++.++. .-..++..+- +....=+..++||+..+..+...++.|
T Consensus 30 dLa~~A~~~al~~agi~p~~ID~vi~-G~~~~~~~~~~~~~r~a~~~~Gl~~~~pa~~Vn~aCaSg~~Ai~~A~~~I~sG 108 (402)
T PRK08242 30 RLAAGLLEALRDRNGLDTAAVDDVVL-GCVTPVGDQGADIARTAVLAAGLPETVPGVQINRFCASGLEAVNLAAAKVRSG 108 (402)
T ss_pred HHHHHHHHHHHHHcCCCHHHcCEEEE-EecCCCccccccHHHHHHHHcCCCCCCCeEEEcchhhhHHHHHHHHHHHHHcC
Confidence 34466899999999999999998774 343332221 1111111111 111111345788899998888888876
Q ss_pred c
Q 045789 120 W 120 (206)
Q Consensus 120 ~ 120 (206)
.
T Consensus 109 ~ 109 (402)
T PRK08242 109 W 109 (402)
T ss_pred C
Confidence 4
No 182
>PLN03168 chalcone synthase; Provisional
Probab=62.22 E-value=11 Score=33.82 Aligned_cols=69 Identities=16% Similarity=0.161 Sum_probs=38.4
Q ss_pred HHHHHHHHHHcCCCcccccccccc-CCCCCc-CCHhhhhc-ceec-ccc-ccccccccccchHHHHHHHHHhhh
Q 045789 50 VSCMEKALAKSGVAKEDVNYINAH-APSTRL-GDLREYQA-LRMN-STK-SLIGHLLGASGAAEAVATIKAIQT 118 (206)
Q Consensus 50 ~~~~~~al~~Agi~~~dI~~ve~h-gtgt~~-~D~~E~~a-~~v~-s~k-~~~Gh~~~asG~~~l~~~~l~l~~ 118 (206)
.++.++||+++|++++|||+|-.. .|+... +-...+.. +-+. +++ ....+..+++|+.+|-.+...++.
T Consensus 106 ~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r~~d~~~gC~g~~~aL~~A~~~i~~ 179 (389)
T PLN03168 106 AEAAQKAIKEWGGRKSDITHIVFATTSGVNMPGADHALAKLLGLKPTVKRVMMYQTGCFGGASVLRVAKDLAEN 179 (389)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCccHHHHHHHHhCcCCcceeeeeeCCccHHHHHHHHHHHHHHHh
Confidence 568999999999999999997533 333210 10011111 3332 222 344555555566666655555554
No 183
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=61.15 E-value=13 Score=31.65 Aligned_cols=72 Identities=19% Similarity=0.075 Sum_probs=42.6
Q ss_pred hHHHHHHHHHHHHHcCCCccccccccccCCCCCcC-CH---hhhhc-ceecccc-ccccccccccchHHHHHHHHHhhhc
Q 045789 46 GVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLG-DL---REYQA-LRMNSTK-SLIGHLLGASGAAEAVATIKAIQTG 119 (206)
Q Consensus 46 ~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~-D~---~E~~a-~~v~s~k-~~~Gh~~~asG~~~l~~~~l~l~~~ 119 (206)
..-..++++++|+++|++++|||++-. ++.++.. .+ ..+.. +.+.... -.+. ..+++|+..|..+...++.|
T Consensus 53 ~~la~~A~~~al~~agl~~~~id~vi~-~~~~~~~~~~~~~~~i~~~lG~~~~~~~~v~-~~Casg~~al~~A~~~i~~g 130 (319)
T PRK09352 53 SDLATEAAKKALEAAGIDPEDIDLIIV-ATTTPDYAFPSTACLVQARLGAKNAAAFDLS-AACSGFVYALSTADQFIRSG 130 (319)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEE-EcCCCCCCCchHHHHHHHHhCCCCCcEeecc-ccchhHHHHHHHHHHHHHcC
Confidence 344567899999999999999998653 3333211 11 11111 2221111 1232 45677888888888888776
No 184
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=59.78 E-value=12 Score=31.89 Aligned_cols=73 Identities=14% Similarity=0.203 Sum_probs=41.9
Q ss_pred hHHHHHHHHHHHHHcCCCccccccccccCCCCCcCC----Hhhhhc-ceeccccccccc-cccccchHHHHHHHHHhhhc
Q 045789 46 GVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGD----LREYQA-LRMNSTKSLIGH-LLGASGAAEAVATIKAIQTG 119 (206)
Q Consensus 46 ~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D----~~E~~a-~~v~s~k~~~Gh-~~~asG~~~l~~~~l~l~~~ 119 (206)
..-..++++++|+++|++++|||++-. ++.++... ...+.. +.+. ....+-- ..+++|+..|..+...++.|
T Consensus 49 ~~l~~~a~~~aL~~ag~~~~~Id~li~-~~~~~~~~~~~~~~~i~~~lg~~-~~~~~~v~~~C~s~~~al~~A~~~i~~g 126 (324)
T cd00827 49 PTMAVEAARRALERAGIDPDDIGLLIV-ATESPIDKGKSAATYLAELLGLT-NAEAFDLKQACYGGTAALQLAANLVESG 126 (324)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEE-EcCCCCCCCccHHHHHHHHcCCC-CCceeehhhhhHHHHHHHHHHHHHHHcC
Confidence 455678999999999999999999764 33222211 001100 2221 1111111 34455777787777777766
Q ss_pred c
Q 045789 120 W 120 (206)
Q Consensus 120 ~ 120 (206)
.
T Consensus 127 ~ 127 (324)
T cd00827 127 P 127 (324)
T ss_pred C
Confidence 3
No 185
>PRK09585 anmK anhydro-N-acetylmuramic acid kinase; Reviewed
Probab=59.62 E-value=8.8 Score=34.25 Aligned_cols=30 Identities=27% Similarity=0.493 Sum_probs=26.1
Q ss_pred hHHHHHHHHHHHHHcCCCccccccccccCC
Q 045789 46 GVGMVSCMEKALAKSGVAKEDVNYINAHAP 75 (206)
Q Consensus 46 ~~~~~~~~~~al~~Agi~~~dI~~ve~hgt 75 (206)
+....+++++.++++++++++|++|-.||-
T Consensus 70 g~~~a~av~~~~~~~~l~~~~id~IgsHGQ 99 (365)
T PRK09585 70 GRLFAEAVNALLAEAGLSPEDIDAIGSHGQ 99 (365)
T ss_pred HHHHHHHHHHHHHHcCCCccCccEEEeCCc
Confidence 445567899999999999999999999984
No 186
>PLN02932 3-ketoacyl-CoA synthase
Probab=59.42 E-value=8.9 Score=35.46 Aligned_cols=68 Identities=13% Similarity=0.254 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHcCCCccccccccccCCCCCcCCHhhhhc------ceec-ccc-ccccccccccchHHHHHHHHHhhhc
Q 045789 49 MVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREYQA------LRMN-STK-SLIGHLLGASGAAEAVATIKAIQTG 119 (206)
Q Consensus 49 ~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~E~~a------~~v~-s~k-~~~Gh~~~asG~~~l~~~~l~l~~~ 119 (206)
..++++++|+++|++|+|||++-+. |.|. ++.=..+ +.+. .++ -+++....++|+.+|-.+-..++.+
T Consensus 152 a~~Aa~~aL~~agi~p~dId~lIv~-tst~--~~~Pslaa~V~~~lGlr~~i~~fdL~gmGCSggl~aL~lA~~ll~~~ 227 (478)
T PLN02932 152 IIGAVDNLFRNTGISPSDIGILVVN-SSTF--NPTPSLSSILVNKFKLRDNIKSLNLGGMGCSAGVIAIDAAKSLLQVH 227 (478)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEE-ccCC--CCCCcHHHHHHHHhCCCCCceEEEeccchhhhHHHHHHHHHHHHHcC
Confidence 3468899999999999999997533 2222 2222222 3332 233 3455566777777777776666654
No 187
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=59.23 E-value=13 Score=33.02 Aligned_cols=74 Identities=22% Similarity=0.088 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHHcCCCccccccccccCC-CCCcCCHhh-h--hcceec--cccccccccccccchHHHHHHHHHhhhcc
Q 045789 47 VGMVSCMEKALAKSGVAKEDVNYINAHAP-STRLGDLRE-Y--QALRMN--STKSLIGHLLGASGAAEAVATIKAIQTGW 120 (206)
Q Consensus 47 ~~~~~~~~~al~~Agi~~~dI~~ve~hgt-gt~~~D~~E-~--~a~~v~--s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ 120 (206)
.-..++++++|+++||+++|||.|-.-.+ +....+... . ....++ ......=+..+++|+..+..+...++.|.
T Consensus 24 eL~~eA~~~AL~dAgl~~~dId~vi~g~~~~~~~~~~~~~~~~~~~~~gl~~~p~~~v~~~CaSg~~Al~~A~~~I~sG~ 103 (389)
T PRK07516 24 SLIVRVAREALAHAGIAAGDVDGIFLGHFNAGFSPQDFPASLVLQADPALRFKPATRVENACATGSAAVYAALDAIEAGR 103 (389)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCccccccchhHHHHHhcCCCCCceeeeccccHHHHHHHHHHHHHHHCCC
Confidence 44567999999999999999998754211 111011111 0 112221 11111113357788888888888888774
No 188
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=58.95 E-value=6.2 Score=33.99 Aligned_cols=31 Identities=19% Similarity=0.213 Sum_probs=23.8
Q ss_pred hHHHHHHHHHHHHHcCCCccccccccccCCCC
Q 045789 46 GVGMVSCMEKALAKSGVAKEDVNYINAHAPST 77 (206)
Q Consensus 46 ~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt 77 (206)
..-..++++++|+++|++++|||++- +++.+
T Consensus 53 ~~la~~Aa~~aL~~ag~~~~dId~li-~~~~~ 83 (329)
T PRK07204 53 SYMGAEAAKKAVEDAKLTLDDIDCII-CASGT 83 (329)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEE-EECCC
Confidence 34456789999999999999999874 33433
No 189
>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane
Probab=58.55 E-value=20 Score=30.93 Aligned_cols=70 Identities=16% Similarity=0.161 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHcCCCccccccccccC---CCCCcCCHhhhhcceec-ccc-ccccccccccchHHHHHHHHHhhh
Q 045789 49 MVSCMEKALAKSGVAKEDVNYINAHA---PSTRLGDLREYQALRMN-STK-SLIGHLLGASGAAEAVATIKAIQT 118 (206)
Q Consensus 49 ~~~~~~~al~~Agi~~~dI~~ve~hg---tgt~~~D~~E~~a~~v~-s~k-~~~Gh~~~asG~~~l~~~~l~l~~ 118 (206)
+..+++++|+++||+|+|||++-++- +.||.-...=.+-..+. .++ -+++=...++|+.++=.+--.|+.
T Consensus 87 ~f~av~~LL~ktgv~p~dIdiLVvncs~f~ptPSLsamIvnr~~mr~di~~~nLsGMGCsAgliai~lA~~lL~~ 161 (290)
T PF08392_consen 87 IFGAVDDLLAKTGVKPSDIDILVVNCSLFNPTPSLSAMIVNRYGMRSDIKSYNLSGMGCSAGLIAIDLAKDLLQA 161 (290)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEECcCCCcCCcHHHHHHHHhCCCcCeeeecccCCcchhhHHHHHHHHHHHHh
Confidence 34588999999999999999865442 23331111000001221 222 355666677777666555544543
No 190
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=57.87 E-value=36 Score=30.47 Aligned_cols=96 Identities=10% Similarity=0.017 Sum_probs=54.8
Q ss_pred EEEEEEEecCCCCCC-CCCCC-ChHHHHHHHHHHHHHcCCCccccccccc-cCC--CCCcCCHh-h--hhc-ceeccccc
Q 045789 25 AEILDGSLTCDAYHI-TAPHP-EGVGMVSCMEKALAKSGVAKEDVNYINA-HAP--STRLGDLR-E--YQA-LRMNSTKS 95 (206)
Q Consensus 25 a~I~g~~~~~dg~~~-~~~~~-~~~~~~~~~~~al~~Agi~~~dI~~ve~-hgt--gt~~~D~~-E--~~a-~~v~s~k~ 95 (206)
.+|.|.+.+--|... ...+- ..+-...+++++|++++|+++|||.+-. +.. +..-+... + +.+ ++. .+..
T Consensus 4 v~Ivg~~rTpfgk~~g~~~~~~~~~L~~~a~~~al~~a~l~~~~Id~vi~G~~~~~~~~~~~~ar~~~l~~gl~~-~vP~ 82 (390)
T PRK06504 4 AYIVAAARTAGGRKGGRLAGWHPADLAAQVLDALVDRSGADPALIEDVIMGCVSQVGEQATNVARNAVLASKLPE-SVPG 82 (390)
T ss_pred eEEEEcccCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCC-CCce
Confidence 346777665555421 11111 1344567899999999999999997664 332 11101111 1 111 222 1111
Q ss_pred cccccccccchHHHHHHHHHhhhccc
Q 045789 96 LIGHLLGASGAAEAVATIKAIQTGWI 121 (206)
Q Consensus 96 ~~Gh~~~asG~~~l~~~~l~l~~~~i 121 (206)
..=+..++||+..+..+...++.|..
T Consensus 83 ~tV~~~CaSG~~Ai~~A~~~I~sG~~ 108 (390)
T PRK06504 83 TSIDRQCGSSQQALHFAAQAVMSGTM 108 (390)
T ss_pred EEEechhhHHHHHHHHHHHHHHCCCC
Confidence 11134488999999999999988854
No 191
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=57.63 E-value=6.5 Score=33.79 Aligned_cols=30 Identities=27% Similarity=0.271 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHHHcCCCccccccccccCCCC
Q 045789 47 VGMVSCMEKALAKSGVAKEDVNYINAHAPST 77 (206)
Q Consensus 47 ~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt 77 (206)
.--.++.+++|+++|++++|||++-. ++.+
T Consensus 54 ~la~~Aa~~aL~~ag~~~~~Id~li~-~t~~ 83 (326)
T PRK05963 54 DLAASAGDMALSDAGIERSDIALTLL-ATST 83 (326)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEE-ECCC
Confidence 44577999999999999999999873 3433
No 192
>PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways. The FAS I pathway, which generally only produces palmitate, is found in eukaryotes and is performed either by a single polypeptide which contains all the reaction centres needed to form a fatty acid, or by two polypeptides which interact to form a multifunctional complex. The FAS II pathway, which is capable of producing many different fatty acids, is found in mitochondria, bacteria, plants and parasites, and is performed by many distinct proteins, each of which catalyses a single step within the pathway. The large diversity of products generated by this pathway is possible because the acyl carrier protein (ACP) intermediates are diffusible entities that can be diverted into other biosynthetic pathways []. 3-Oxoacyl-[acyl carrier protein (ACP)] synthase III catalyses the first condensation step within the FAS II pathway, using acetyl-CoA as the primer and malonyl-ACP as the acceptor, as shown below. Acyl-[ACP] + malonyl-[ACP] = 3-oxoacyl-[ACP] + CO(2) + [ACP] The oxoacyl-ACP formed by this reaction subsequently enters the elongation cycle, where the acyl chain is progressively lengthened by the combined activities of several enzymes. The enzymes studied so far are homodimers, where each monomer consists of two domains (N-terminal and C-terminal) which are similar in structure, but not in sequence [, ]. This entry represents a conserved region within the N-terminal domain.; GO: 0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity, 0006633 fatty acid biosynthetic process; PDB: 1ZOW_C 1UB7_B 3IL7_A 3IL3_A 2X3E_B 4DFE_C 3LED_B 3ROW_B 3S23_A 3S1Z_A ....
Probab=56.53 E-value=10 Score=25.66 Aligned_cols=13 Identities=31% Similarity=0.634 Sum_probs=10.7
Q ss_pred CCceEEEEEEccc
Q 045789 1 MGEGAGVLLLEEL 13 (206)
Q Consensus 1 lgEGa~alvL~~~ 13 (206)
+|||++++||++.
T Consensus 52 ~gDgAaA~vl~~~ 64 (80)
T PF08545_consen 52 FGDGAAAVVLSRD 64 (80)
T ss_dssp B-EEEEEEEEEEE
T ss_pred ecchheEEEEEec
Confidence 4899999999985
No 193
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=55.87 E-value=14 Score=32.79 Aligned_cols=93 Identities=15% Similarity=0.014 Sum_probs=49.8
Q ss_pred EEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCCCC--c---CCHhhhhcceecc-ccccc-c
Q 045789 26 EILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPSTR--L---GDLREYQALRMNS-TKSLI-G 98 (206)
Q Consensus 26 ~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~--~---~D~~E~~a~~v~s-~k~~~-G 98 (206)
.|.|++.+.-+.... .....-..++++++|+++|++++|||.+... +.++ . .......+-.++- .+..+ =
T Consensus 5 ~IvG~~~tp~~~~~~--~~~~eLa~~a~~~Al~dagl~~~~Id~vi~g-~~~~~~~~~~~~~a~~va~~lGl~~~~~~~v 81 (389)
T PRK06064 5 AIIGVGQTKFGELWD--VSLRDLAVEAGLEALEDAGIDGKDIDAMYVG-NMSAGLFVSQEHIAALIADYAGLAPIPATRV 81 (389)
T ss_pred EEEEcccccceecCC--CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEE-ecccccccccccHHHHHHHHcCCCCCCeeEE
Confidence 466766543222111 1113445778999999999999999987642 2211 1 1111111111121 12211 1
Q ss_pred ccccccchHHHHHHHHHhhhccc
Q 045789 99 HLLGASGAAEAVATIKAIQTGWI 121 (206)
Q Consensus 99 h~~~asG~~~l~~~~l~l~~~~i 121 (206)
...+++|+..+..+...++.|..
T Consensus 82 ~~aCasg~~ai~~A~~~I~sG~~ 104 (389)
T PRK06064 82 EAACASGGAALRQAYLAVASGEA 104 (389)
T ss_pred eCCcHHHHHHHHHHHHHHHCCCC
Confidence 23467778888888888877743
No 194
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=55.36 E-value=17 Score=32.49 Aligned_cols=95 Identities=16% Similarity=0.024 Sum_probs=50.2
Q ss_pred EEEEEEEecCCCCC-CCCCCCC-hHHHHHHHHHHHHHcCCCccccccccccCCCCCcCC---Hhhhhcceecc--ccccc
Q 045789 25 AEILDGSLTCDAYH-ITAPHPE-GVGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGD---LREYQALRMNS--TKSLI 97 (206)
Q Consensus 25 a~I~g~~~~~dg~~-~~~~~~~-~~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D---~~E~~a~~v~s--~k~~~ 97 (206)
..|.|++.+.-+.. .....-+ ..-..++++++|+++|++++|||+|-.. +.++.+| .....+..++. .++.+
T Consensus 4 v~Ivg~~rTpfg~~~g~~~~~~~~eLa~~A~~~aL~~agl~~~dID~vi~g-~~~~~~~~~~~~~~~~~~~Gl~~~~p~~ 82 (393)
T PRK08235 4 TVIVSAARTPFGKFGGSLKDVKATELGGIAIKEALERANVSAEDVEEVIMG-TVLQGGQGQIPSRQAARAAGIPWEVQTE 82 (393)
T ss_pred EEEEecCcCCccCCCCcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEE-ecccCCCCCCHHHHHHHHcCCCCCccee
Confidence 44667765554432 1111222 3445779999999999999999987643 2211111 11111111121 11111
Q ss_pred c-ccccccchHHHHHHHHHhhhcc
Q 045789 98 G-HLLGASGAAEAVATIKAIQTGW 120 (206)
Q Consensus 98 G-h~~~asG~~~l~~~~l~l~~~~ 120 (206)
- +..+++|+..+..+...++.|.
T Consensus 83 ~V~~~CaSg~~Al~~A~~~I~sG~ 106 (393)
T PRK08235 83 TVNKVCASGLRAVTLADQIIRAGD 106 (393)
T ss_pred ehhhhhhHHHHHHHHHHHHHHCCC
Confidence 1 2345677777777777777664
No 195
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=55.30 E-value=17 Score=32.01 Aligned_cols=69 Identities=22% Similarity=0.187 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHcCCCccccccccccCCCCCcCCHhhhhc------ceecccccccc-ccccccchHHHHHHHHHhhhcc
Q 045789 48 GMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREYQA------LRMNSTKSLIG-HLLGASGAAEAVATIKAIQTGW 120 (206)
Q Consensus 48 ~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~E~~a------~~v~s~k~~~G-h~~~asG~~~l~~~~l~l~~~~ 120 (206)
-..+++++||+++|++++|||.+-. ++.++.. .....+ +.+.. ..+. ...+++|+..|..+...++.|.
T Consensus 98 la~~Aa~~aL~~agl~~~~Id~li~-~~~~~~~-~~p~~a~~v~~~Lgl~~--~~~~v~~aCasg~~al~~A~~~i~~g~ 173 (372)
T PRK07515 98 MGVAAARQALARAGRTAEDIDAVIV-ACSNMQR-AYPAMAIEIQQALGIEG--FAFDMNVACSSATFGIQTAANAIRSGS 173 (372)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEE-ECCCCCC-CCcHHHHHHHHhcCCCC--cEEEecchhHHHHHHHHHHHHHHHcCC
Confidence 3457899999999999999998754 3333211 111111 22211 1121 2345667777777777777663
No 196
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=54.96 E-value=13 Score=33.25 Aligned_cols=96 Identities=14% Similarity=0.033 Sum_probs=53.4
Q ss_pred EEEEEEecCCCCC--CCCCC-CChHHHHHHHHHHHHHcCCCcccccccccc-CCCCCc-CC-Hhhhhcceecc---cccc
Q 045789 26 EILDGSLTCDAYH--ITAPH-PEGVGMVSCMEKALAKSGVAKEDVNYINAH-APSTRL-GD-LREYQALRMNS---TKSL 96 (206)
Q Consensus 26 ~I~g~~~~~dg~~--~~~~~-~~~~~~~~~~~~al~~Agi~~~dI~~ve~h-gtgt~~-~D-~~E~~a~~v~s---~k~~ 96 (206)
+|.|.+.+--+.. ..... +...-..++++++|+++||+++|||.|..- .+.... +. .....+..++- ....
T Consensus 5 ~Ivg~~rTpfgk~~~~~l~~~~~~dL~~~A~~~aL~~agi~~~~ID~vi~G~~~~~~~~~~~~a~~i~~~lGl~~~~p~~ 84 (392)
T PRK07108 5 VIVSTARTPLAKSWRGAFNMTHGATLGGHVVQHAVERAKLDPAEVEDVIMGCANPEGATGANIARQIALRAGLPVTVPGM 84 (392)
T ss_pred EEEecccCCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCcEEEEEeecccccccHHHHHHHHHcCCCCCCcee
Confidence 4666665544432 11111 113445679999999999999999986642 221111 11 11111122221 1111
Q ss_pred ccccccccchHHHHHHHHHhhhccc
Q 045789 97 IGHLLGASGAAEAVATIKAIQTGWI 121 (206)
Q Consensus 97 ~Gh~~~asG~~~l~~~~l~l~~~~i 121 (206)
.=+..++||+..+..+...++.|..
T Consensus 85 ~V~~aCaSg~~Al~~A~~~I~sG~~ 109 (392)
T PRK07108 85 TVNRFCSSGLQTIALAAQRVIAGEG 109 (392)
T ss_pred eecchhhHHHHHHHHHHHHHHCCCC
Confidence 1145588999999999999988763
No 197
>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A.
Probab=54.72 E-value=9.6 Score=33.26 Aligned_cols=28 Identities=39% Similarity=0.535 Sum_probs=21.2
Q ss_pred ChHHHHHHHHHHHHHcCCCccccccccc
Q 045789 45 EGVGMVSCMEKALAKSGVAKEDVNYINA 72 (206)
Q Consensus 45 ~~~~~~~~~~~al~~Agi~~~dI~~ve~ 72 (206)
+..-++++++.+|++++++++||+|+-+
T Consensus 51 E~~m~~~A~~~al~Ka~l~~~dId~~~a 78 (329)
T PF07451_consen 51 ESKMQKEAVELALKKAGLKKEDIDYLFA 78 (329)
T ss_dssp HHHHHHHHHHHHHHHTT--GGG-SEEEE
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCeEEEe
Confidence 3456778999999999999999999984
No 198
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=54.30 E-value=51 Score=29.62 Aligned_cols=96 Identities=18% Similarity=0.024 Sum_probs=53.2
Q ss_pred EEEEEEecCCCCCC-CCCCCC-hHHHHHHHHHHHHH-cCCCcccccccccc-CC--CCCcCCHhhhhcceecc---cccc
Q 045789 26 EILDGSLTCDAYHI-TAPHPE-GVGMVSCMEKALAK-SGVAKEDVNYINAH-AP--STRLGDLREYQALRMNS---TKSL 96 (206)
Q Consensus 26 ~I~g~~~~~dg~~~-~~~~~~-~~~~~~~~~~al~~-Agi~~~dI~~ve~h-gt--gt~~~D~~E~~a~~v~s---~k~~ 96 (206)
.|.|.+.+--|... ...+.+ ..-...+++++|++ +||+++|||.|..- .. +.......-..+...+- +...
T Consensus 5 ~Ivg~~rTpfgk~~g~l~~~~~~~L~~~a~~~al~~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~vP~~ 84 (401)
T PRK09050 5 FICDAIRTPIGRYGGALSSVRADDLGAVPLKALMARNPGVDWEAVDDVIYGCANQAGEDNRNVARMSALLAGLPVSVPGT 84 (401)
T ss_pred EEEecccCCcccCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccchHHHHHHHHcCCCCCCceE
Confidence 46676655544421 111211 34456789999995 79999999986652 21 11001111111111111 1111
Q ss_pred ccccccccchHHHHHHHHHhhhccc
Q 045789 97 IGHLLGASGAAEAVATIKAIQTGWI 121 (206)
Q Consensus 97 ~Gh~~~asG~~~l~~~~l~l~~~~i 121 (206)
.=+..++||+..+..+...++.|..
T Consensus 85 tV~~aCaSG~~Ai~~A~~~I~sG~~ 109 (401)
T PRK09050 85 TINRLCGSGMDAVGTAARAIKAGEA 109 (401)
T ss_pred EEecccccHHHHHHHHHHHHHCCCC
Confidence 1145589999999999999988754
No 199
>PLN03169 chalcone synthase family protein; Provisional
Probab=53.91 E-value=16 Score=32.63 Aligned_cols=24 Identities=13% Similarity=0.088 Sum_probs=20.5
Q ss_pred HHHHHHHHHHcCCCcccccccccc
Q 045789 50 VSCMEKALAKSGVAKEDVNYINAH 73 (206)
Q Consensus 50 ~~~~~~al~~Agi~~~dI~~ve~h 73 (206)
.++.+++|+++|++++|||++-..
T Consensus 111 ~~Aa~~aL~~ag~~~~dId~lI~~ 134 (391)
T PLN03169 111 VEASLACIKEWGRPVSDITHLVYV 134 (391)
T ss_pred HHHHHHHHHHhCCCHHHCCEEEEE
Confidence 568999999999999999986533
No 200
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=53.08 E-value=8 Score=34.07 Aligned_cols=27 Identities=7% Similarity=-0.057 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHHcCCCcccccccccc
Q 045789 47 VGMVSCMEKALAKSGVAKEDVNYINAH 73 (206)
Q Consensus 47 ~~~~~~~~~al~~Agi~~~dI~~ve~h 73 (206)
.--.++++++|+++|++++|||++.+.
T Consensus 62 ~la~~Aa~~aL~~a~~~~~dId~lI~~ 88 (353)
T PRK12880 62 DLGKHAANTLLQGLNIDKNSLDALIVV 88 (353)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEE
Confidence 344679999999999999999998744
No 201
>PRK06840 hypothetical protein; Validated
Probab=52.67 E-value=9.9 Score=32.91 Aligned_cols=27 Identities=15% Similarity=0.219 Sum_probs=22.8
Q ss_pred hHHHHHHHHHHHHHcCCCccccccccc
Q 045789 46 GVGMVSCMEKALAKSGVAKEDVNYINA 72 (206)
Q Consensus 46 ~~~~~~~~~~al~~Agi~~~dI~~ve~ 72 (206)
..-..++++++|+++|++++|||++-.
T Consensus 54 ~~la~~Aa~~aL~~ag~~~~dId~li~ 80 (339)
T PRK06840 54 SDMAIAAAKPALKQAGVDPAAIDVVIY 80 (339)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 445577999999999999999999763
No 202
>PLN03171 chalcone synthase-like protein; Provisional
Probab=51.47 E-value=26 Score=31.48 Aligned_cols=23 Identities=22% Similarity=0.310 Sum_probs=20.4
Q ss_pred HHHHHHHHHHcCCCccccccccc
Q 045789 50 VSCMEKALAKSGVAKEDVNYINA 72 (206)
Q Consensus 50 ~~~~~~al~~Agi~~~dI~~ve~ 72 (206)
.++.+++|+++|++++|||+|-.
T Consensus 113 ~~Aa~~aL~~ag~~~~dId~li~ 135 (399)
T PLN03171 113 AEAAKKAIAEWGRPAADITHLVV 135 (399)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEE
Confidence 56889999999999999999763
No 203
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=50.89 E-value=23 Score=31.64 Aligned_cols=75 Identities=17% Similarity=0.099 Sum_probs=41.7
Q ss_pred hHHHHHHHHHHHHHcCCCcccccccccc-CCCCCcC-CHhhhhc---ceeccccccccccccccchHHHHHHHHHhhhcc
Q 045789 46 GVGMVSCMEKALAKSGVAKEDVNYINAH-APSTRLG-DLREYQA---LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGW 120 (206)
Q Consensus 46 ~~~~~~~~~~al~~Agi~~~dI~~ve~h-gtgt~~~-D~~E~~a---~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ 120 (206)
.+....+++++|++++|+|+|||.|-+. .+....+ ......+ +-........=...+++|+..+..+...++.|.
T Consensus 24 ~el~~~a~~~Al~~agl~p~dID~vi~g~~~~~~~g~~~~~~~~~~~lg~~~~p~~~V~~~Casg~~al~~A~~~I~sG~ 103 (393)
T cd00826 24 HEAGAKAIAAALEPAGVAAGAVEEACLGQVLGAGEGQNCAQQAAMHAGGLQEAPAIGMNNLCGSGLRALALAMQLIAGGD 103 (393)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEEccCCcccCcHHHHHHHHcCCCCCCcEEEecchhHHHHHHHHHHHHHHHCCC
Confidence 4556778899999999999999976532 1111101 1111001 111111111112346778888888888887764
No 204
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase. Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.
Probab=47.68 E-value=65 Score=28.97 Aligned_cols=96 Identities=15% Similarity=0.001 Sum_probs=53.8
Q ss_pred EEEEEEecCCCCCC-CCCCCC-hHHHHHHHHHHHHH-cCCCcccccccccc-CCCCCc--CCHhhhhc--ceec-ccccc
Q 045789 26 EILDGSLTCDAYHI-TAPHPE-GVGMVSCMEKALAK-SGVAKEDVNYINAH-APSTRL--GDLREYQA--LRMN-STKSL 96 (206)
Q Consensus 26 ~I~g~~~~~dg~~~-~~~~~~-~~~~~~~~~~al~~-Agi~~~dI~~ve~h-gtgt~~--~D~~E~~a--~~v~-s~k~~ 96 (206)
.|.|.+.+--|... ....-+ ..-...+++++|++ ++|+++|||.|..- ...... ....-..+ .-+. .+...
T Consensus 4 ~Ivg~~rTpfgk~~g~~~~~~~~~L~~~a~~~al~~~a~i~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~~p~~ 83 (400)
T TIGR02430 4 YICDAIRTPIGRYGGSLSSVRADDLAAVPIKALLARNPQLDWAAIDDVIYGCANQAGEDNRNVARMAALLAGLPVSVPGT 83 (400)
T ss_pred EEEecccCCcccCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCceE
Confidence 46676655544421 111111 34456789999995 79999999987652 221111 11111111 1111 12221
Q ss_pred ccccccccchHHHHHHHHHhhhccc
Q 045789 97 IGHLLGASGAAEAVATIKAIQTGWI 121 (206)
Q Consensus 97 ~Gh~~~asG~~~l~~~~l~l~~~~i 121 (206)
.=+..++||+..+..+...++.|..
T Consensus 84 ~V~~~CaSG~~Ai~~a~~~I~sG~~ 108 (400)
T TIGR02430 84 TVNRLCGSGLDAIGMAARAIKAGEA 108 (400)
T ss_pred EeechhhhHHHHHHHHHHHHHCCCC
Confidence 2245589999999999999988854
No 205
>PRK08304 stage V sporulation protein AD; Validated
Probab=46.45 E-value=16 Score=32.20 Aligned_cols=68 Identities=18% Similarity=0.220 Sum_probs=42.2
Q ss_pred CceEEEEEEccchHHHhcCCce----eEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCCC
Q 045789 2 GEGAGVLLLEELEHAKKRGTNI----YAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAPS 76 (206)
Q Consensus 2 gEGa~alvL~~~~~A~~~g~~i----~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgtg 76 (206)
++|++++||.+.. .+-+| .+.|..+++..-.+-. ....++-...|.+=|++-|.+|+|-|.|-.-..|
T Consensus 166 vtGAGA~i~~~~~----~~~~i~~~t~Gkv~D~g~~d~~nmg---aaMapAa~dti~~h~~d~~~~~~~yDli~tGDlg 237 (337)
T PRK08304 166 VTGAGAVLLSREG----SGPRITHATIGKVVDLGIKDPNDMG---AAMAPAAADTIQQHFKDTGRSPEDYDLIVTGDLG 237 (337)
T ss_pred eeccEEEEEecCC----CCceEEEEeEEEEEecCCCCcccch---hhhhHHHHHHHHHHHHHcCCChhhccEEEEcchH
Confidence 5799999998632 22222 2334444443211111 2224566788999999999999999999854443
No 206
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=46.21 E-value=12 Score=32.72 Aligned_cols=27 Identities=15% Similarity=0.212 Sum_probs=23.0
Q ss_pred hHHHHHHHHHHHHHcCCCccccccccc
Q 045789 46 GVGMVSCMEKALAKSGVAKEDVNYINA 72 (206)
Q Consensus 46 ~~~~~~~~~~al~~Agi~~~dI~~ve~ 72 (206)
..-..++.++||+++|++++|||++-.
T Consensus 51 ~~la~~Aa~~aL~~agl~~~dID~li~ 77 (345)
T TIGR00748 51 ATIGVEAARNALKRAKIDPKDIGAVYV 77 (345)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 445577999999999999999999864
No 207
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=45.59 E-value=84 Score=28.05 Aligned_cols=95 Identities=17% Similarity=0.014 Sum_probs=50.4
Q ss_pred EEEEEEecCCCCC--CCCCCCC-hHHHHHHHHHHHHH-cCCCcccccccccc-CCCCCc--CCH---hhhhc-ceecccc
Q 045789 26 EILDGSLTCDAYH--ITAPHPE-GVGMVSCMEKALAK-SGVAKEDVNYINAH-APSTRL--GDL---REYQA-LRMNSTK 94 (206)
Q Consensus 26 ~I~g~~~~~dg~~--~~~~~~~-~~~~~~~~~~al~~-Agi~~~dI~~ve~h-gtgt~~--~D~---~E~~a-~~v~s~k 94 (206)
.|.|++.+.-+.. .+..+.. ..-...+++++|++ ++|+++|||.+-.- ...... ... +...+ ++. .+.
T Consensus 5 ~Ivg~~rTpfg~~~~g~~~~~~~~~L~~~~~~~al~~~agl~~~~Id~vi~g~~~~~~~~g~~~ar~~~~~~Gl~~-~~p 83 (387)
T PRK08947 5 VIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPALDPAEIDDIIWGCVQQTLEQGFNIARNAALLAGIPH-SVP 83 (387)
T ss_pred EEEEccCCCcccCCCCCcCCCCHHHHHHHHHHHHHHhccCcChHHhCeEEEEeccccccccccHHHHHHHHcCCCC-CCc
Confidence 4667665443331 1112222 33445678999996 79999999976532 111100 000 11111 221 111
Q ss_pred ccccccccccchHHHHHHHHHhhhccc
Q 045789 95 SLIGHLLGASGAAEAVATIKAIQTGWI 121 (206)
Q Consensus 95 ~~~Gh~~~asG~~~l~~~~l~l~~~~i 121 (206)
...=+..++||+..+..+...++.|..
T Consensus 84 ~~~V~~~caSG~~Ai~~A~~~I~sG~~ 110 (387)
T PRK08947 84 AVTVNRLCGSSMQALHDAARAIMTGDG 110 (387)
T ss_pred ceeeechhHHHHHHHHHHHHHHHCCCC
Confidence 111134578999999999999988743
No 208
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=45.03 E-value=12 Score=33.02 Aligned_cols=61 Identities=18% Similarity=0.098 Sum_probs=39.5
Q ss_pred HHHHHHHHHHcCCCccccccccccCCCCCcCCHhhhhc-ceec----cccccccccccccchHHHH
Q 045789 50 VSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREYQA-LRMN----STKSLIGHLLGASGAAEAV 110 (206)
Q Consensus 50 ~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~E~~a-~~v~----s~k~~~Gh~~~asG~~~l~ 110 (206)
..+++++|+++|++++||+++-.|=.+...-|.+.-.- ++-. .+-..+|++.+|+-...|-
T Consensus 245 ~~~i~~~L~~~gl~~~did~~v~HQ~~~~i~~~i~~~Lgl~~ek~~~~~l~~~GNtssasip~~L~ 310 (353)
T PRK12880 245 PKSFKEILEFSKVDEKDIAFHLFHQSNAYLVDCIKEELKLNDDKVPNFIMEKYANLSACSLPALLC 310 (353)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEECCCCHHHHHHHHHHhCCCHHHhhhhhHHhhCCHHHHHHHHHHH
Confidence 36889999999999999999999966655555443222 2211 1123467777665444443
No 209
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=44.98 E-value=93 Score=27.83 Aligned_cols=96 Identities=13% Similarity=-0.006 Sum_probs=51.0
Q ss_pred EEEEEEEecCCCCC--CCCCCCC-hHHHHHHHHHHHHHcCCCcccccccccc-CCCC-Cc-CCHhhhhcceeccc--ccc
Q 045789 25 AEILDGSLTCDAYH--ITAPHPE-GVGMVSCMEKALAKSGVAKEDVNYINAH-APST-RL-GDLREYQALRMNST--KSL 96 (206)
Q Consensus 25 a~I~g~~~~~dg~~--~~~~~~~-~~~~~~~~~~al~~Agi~~~dI~~ve~h-gtgt-~~-~D~~E~~a~~v~s~--k~~ 96 (206)
.+|.|++.+.-|.. ....+-+ ..-..++++++|+++|+.++|||.+-.. .+.. .. ....-..+..++-. ++.
T Consensus 4 v~Ivg~~rTpfg~~~~g~l~~~~~~eLa~~A~~~AL~~ag~~~~dID~vi~g~~~~~~~~g~~~a~~~~~~lGl~~~~p~ 83 (391)
T PRK07661 4 AVIVAGARTPVGKAKKGSLKTVRPDDLGALVVKETLKRAGNYEGPIDDLIIGCAMPEAEQGLNMARNIGALAGLPYTVPA 83 (391)
T ss_pred EEEEEccCCCcccCCCCccCCCCHHHHHHHHHHHHHHhcCCChhHCCEEEEEeccccccccchHHHHHHHHcCCCCCcce
Confidence 34677765544432 1111111 2344678999999999888999987653 1111 00 11111111112211 111
Q ss_pred c-cccccccchHHHHHHHHHhhhcc
Q 045789 97 I-GHLLGASGAAEAVATIKAIQTGW 120 (206)
Q Consensus 97 ~-Gh~~~asG~~~l~~~~l~l~~~~ 120 (206)
+ =...++||+..+..+...++.|.
T Consensus 84 ~~V~~aCaSG~~Al~~A~~~I~sG~ 108 (391)
T PRK07661 84 ITINRYCSSGLQSIAYGAERIMLGH 108 (391)
T ss_pred eehhhhhhHHHHHHHHHHHHHHcCC
Confidence 1 13457888999998888888773
No 210
>COG0533 QRI7 Metal-dependent proteases with possible chaperone activity [Posttranslational modification, protein turnover, chaperones]
Probab=44.37 E-value=21 Score=31.63 Aligned_cols=32 Identities=31% Similarity=0.481 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHcCCCccccccccc-cCCCCC
Q 045789 47 VGMVSCMEKALAKSGVAKEDVNYINA-HAPSTR 78 (206)
Q Consensus 47 ~~~~~~~~~al~~Agi~~~dI~~ve~-hgtgt~ 78 (206)
..+..+++++|++||++.+|||.|-. .|.|-.
T Consensus 52 e~i~~li~~al~eA~~~~~dID~IA~T~gPGL~ 84 (342)
T COG0533 52 ENIPPLIEEALAEAGVSLEDIDAIAVTAGPGLG 84 (342)
T ss_pred HHHHHHHHHHHHHcCCCcccCCEEEEecCCCch
Confidence 45567999999999999999999763 455543
No 211
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=43.79 E-value=14 Score=32.75 Aligned_cols=26 Identities=35% Similarity=0.382 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHcCCCccccccccc
Q 045789 47 VGMVSCMEKALAKSGVAKEDVNYINA 72 (206)
Q Consensus 47 ~~~~~~~~~al~~Agi~~~dI~~ve~ 72 (206)
.--.++++++|+++|++++|||++-.
T Consensus 98 ~La~~Aa~~aL~~agi~~~dId~li~ 123 (379)
T PLN02326 98 SLAVEAAKKALEMAGVDPEDVDLVLL 123 (379)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 34467999999999999999998764
No 212
>PF03702 UPF0075: Uncharacterised protein family (UPF0075); InterPro: IPR005338 Anhydro-N-acetylmuramic acid kinase catalyzes the specific phosphorylation of 1,6-anhydro-N-acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. It is also required for the utilisation of anhMurNAc, either imported from the medium, or derived from its own cell wall murein, and in so doing plays a role in cell wall recycling [, ]. ; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0006040 amino sugar metabolic process, 0009254 peptidoglycan turnover; PDB: 3QBX_B 3QBW_A 3CQY_B.
Probab=43.79 E-value=19 Score=32.19 Aligned_cols=30 Identities=23% Similarity=0.496 Sum_probs=22.1
Q ss_pred hHHHHHHHHHHHHHcCCCccccccccccCC
Q 045789 46 GVGMVSCMEKALAKSGVAKEDVNYINAHAP 75 (206)
Q Consensus 46 ~~~~~~~~~~al~~Agi~~~dI~~ve~hgt 75 (206)
+....+++.+.++++++++++|++|-.||-
T Consensus 67 g~~~a~av~~~l~~~~i~~~~I~~IgsHGQ 96 (364)
T PF03702_consen 67 GELFADAVNQFLKKNGISPSDIDLIGSHGQ 96 (364)
T ss_dssp HHHHHHHHHHHHHHCT--GGGEEEEEE--E
T ss_pred HHHHHHHHHHHHHHcCCCcccccEEEeCCc
Confidence 345567999999999999999999999983
No 213
>PRK04262 hypothetical protein; Provisional
Probab=43.06 E-value=15 Score=32.13 Aligned_cols=27 Identities=15% Similarity=0.316 Sum_probs=22.7
Q ss_pred hHHHHHHHHHHHHHcCCCccccccccc
Q 045789 46 GVGMVSCMEKALAKSGVAKEDVNYINA 72 (206)
Q Consensus 46 ~~~~~~~~~~al~~Agi~~~dI~~ve~ 72 (206)
..-..++++++|+++|++++|||++-.
T Consensus 52 ~~la~~Aa~~aL~~ag~~~~dId~li~ 78 (347)
T PRK04262 52 ATIAVEAARNALKRAGIDPKEIGAVYV 78 (347)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 345567999999999999999998753
No 214
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA. This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.
Probab=42.60 E-value=96 Score=27.68 Aligned_cols=74 Identities=20% Similarity=0.073 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHH-cCCCcccccccccc-CC--CCCcCCHhhhhcceecc---ccccccccccccchHHHHHHHHHhhhc
Q 045789 47 VGMVSCMEKALAK-SGVAKEDVNYINAH-AP--STRLGDLREYQALRMNS---TKSLIGHLLGASGAAEAVATIKAIQTG 119 (206)
Q Consensus 47 ~~~~~~~~~al~~-Agi~~~dI~~ve~h-gt--gt~~~D~~E~~a~~v~s---~k~~~Gh~~~asG~~~l~~~~l~l~~~ 119 (206)
.-...+++.+|++ ++|+++|||.+..- .. +..........++..+- +....=+..++||+..+..+...++.|
T Consensus 27 ~L~~~a~~~al~~~agl~~~~Id~v~~G~~~~~~~~g~~~ar~~~~~~g~~~~~p~~tV~~~CaSG~~Ai~~Aa~~I~sG 106 (385)
T TIGR02445 27 DLSAHLMSKLLARNPKVDPAEVEDIYWGCVQQTLEQGFNIARNAALLAQIPHTSAAVTVNRLCGSSMQALHDAARAIMTG 106 (385)
T ss_pred HHHHHHHHHHHHhccCCCHHHcCEEEEecccccccccchHHHHHHHHCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHCC
Confidence 4556799999996 59999999976542 11 11101111111111110 111111356788899998888888877
Q ss_pred c
Q 045789 120 W 120 (206)
Q Consensus 120 ~ 120 (206)
.
T Consensus 107 ~ 107 (385)
T TIGR02445 107 D 107 (385)
T ss_pred C
Confidence 4
No 215
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=41.48 E-value=38 Score=30.91 Aligned_cols=74 Identities=14% Similarity=0.105 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHHcCCCccc--ccccccc-CCCCC---cCCHhhhhc----ce-----eccccccccccccccchHHHHH
Q 045789 47 VGMVSCMEKALAKSGVAKED--VNYINAH-APSTR---LGDLREYQA----LR-----MNSTKSLIGHLLGASGAAEAVA 111 (206)
Q Consensus 47 ~~~~~~~~~al~~Agi~~~d--I~~ve~h-gtgt~---~~D~~E~~a----~~-----v~s~k~~~Gh~~~asG~~~l~~ 111 (206)
.-..++++++|+++||+++| ||.+... ..+.. ........+ ++ +.......=+..++||+..+..
T Consensus 50 eL~~~a~~~al~~agl~~~d~~ID~vi~G~~~~~~~~~~~~~a~~~~~~~gl~~~~~gl~~~p~~~V~~~caSG~~Ai~~ 129 (438)
T PTZ00455 50 ELLATAIQGTLENTGLDGKAALVDKVVVGNFLGELFSSQGHLGPAAVGSLGQSGASNALLYKPAMRVEGACASGGLAVQS 129 (438)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCcCEEEEEeccccccccccchHHHHHHhccCcccccccCCCceeEEECcCHHHHHHHHH
Confidence 44577999999999999999 9987532 11111 011111111 11 1111111113457899999999
Q ss_pred HHHHhhhcc
Q 045789 112 TIKAIQTGW 120 (206)
Q Consensus 112 ~~l~l~~~~ 120 (206)
+...++.|.
T Consensus 130 A~~~I~sG~ 138 (438)
T PTZ00455 130 AWEALLAGT 138 (438)
T ss_pred HHHHHHCCC
Confidence 999888874
No 216
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=41.33 E-value=1.2e+02 Score=27.23 Aligned_cols=96 Identities=14% Similarity=-0.019 Sum_probs=54.0
Q ss_pred EEEEEEEecCCCCC-CCCCCCC-hHHHHHHHHHHHHH-cCCCcccccccccc-CC--CCCcCCHhhhhc----ceecccc
Q 045789 25 AEILDGSLTCDAYH-ITAPHPE-GVGMVSCMEKALAK-SGVAKEDVNYINAH-AP--STRLGDLREYQA----LRMNSTK 94 (206)
Q Consensus 25 a~I~g~~~~~dg~~-~~~~~~~-~~~~~~~~~~al~~-Agi~~~dI~~ve~h-gt--gt~~~D~~E~~a----~~v~s~k 94 (206)
.+|.|.+.+--|.. ......+ ..-...+++++|++ ++|+++|||.|-.- .. +.......-..+ ++. .+.
T Consensus 4 v~Ivg~~rTpfgk~~g~~~~~~~~~L~~~a~~~al~r~a~i~~~~Id~vi~G~~~~~~~~g~~~ar~~~l~~Gl~~-~vp 82 (400)
T PRK13359 4 AFICDAIRTPIGRYGGALSSVRADDLGAVPLKALVERNPDVDWAAIDDVIYGCANQAGEDNRNVARMSLLLAGLPH-GVP 82 (400)
T ss_pred EEEEeccCCCccCCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCC-CCc
Confidence 34667665554442 1111111 33446689999996 59999999987652 11 111112221111 221 122
Q ss_pred ccccccccccchHHHHHHHHHhhhccc
Q 045789 95 SLIGHLLGASGAAEAVATIKAIQTGWI 121 (206)
Q Consensus 95 ~~~Gh~~~asG~~~l~~~~l~l~~~~i 121 (206)
...=+..++||+..+..+...++.|..
T Consensus 83 ~~tV~~~CaSG~~Av~~A~~~I~sG~~ 109 (400)
T PRK13359 83 GSTINRLCGSGMDAVGVAARAIKSGEA 109 (400)
T ss_pred eEEEeccchhHHHHHHHHHHHHHcCCC
Confidence 211145588999999999999998864
No 217
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=39.54 E-value=43 Score=30.10 Aligned_cols=48 Identities=13% Similarity=0.016 Sum_probs=31.0
Q ss_pred EEEEEEEecCCCC-CC-CCCCC-ChHHHHHHHHHHHHHc-CCCccccccccc
Q 045789 25 AEILDGSLTCDAY-HI-TAPHP-EGVGMVSCMEKALAKS-GVAKEDVNYINA 72 (206)
Q Consensus 25 a~I~g~~~~~dg~-~~-~~~~~-~~~~~~~~~~~al~~A-gi~~~dI~~ve~ 72 (206)
.+|.|++.+.-+. .. ..... ...-..++++++|+++ ||+++|||.|-.
T Consensus 8 v~Ivg~~rTpfg~~~~g~~~~~s~~eLa~~A~~~AL~~a~gl~~~dID~vi~ 59 (399)
T PRK09052 8 AYIVAATRTPVGKAPRGMFKNTRPDDLLAHVLRSAVAQVPGLDPKLIEDAIV 59 (399)
T ss_pred EEEEEeccCCcccCCCCCCCCCCHHHHHHHHHHHHHHhccCcCHHHCCEEEE
Confidence 4577776554443 11 11111 1344567999999997 999999998653
No 218
>PF14804 Jag_N: Jag N-terminus; PDB: 3GKU_B.
Probab=38.96 E-value=17 Score=22.93 Aligned_cols=23 Identities=35% Similarity=0.606 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHHHcCCCcccccc
Q 045789 47 VGMVSCMEKALAKSGVAKEDVNY 69 (206)
Q Consensus 47 ~~~~~~~~~al~~Agi~~~dI~~ 69 (206)
....+++..|+++-+++.++++|
T Consensus 5 kt~eeAi~~A~~~l~~~~~~~~~ 27 (52)
T PF14804_consen 5 KTVEEAIEKALKELGVPREELEY 27 (52)
T ss_dssp SSHHHHHHHHHHHTT--GGGEEE
T ss_pred CCHHHHHHHHHHHhCCChHHEEE
Confidence 45789999999999999999987
No 219
>PF15127 DUF4565: Protein of unknown function (DUF4565)
Probab=38.04 E-value=35 Score=24.17 Aligned_cols=25 Identities=20% Similarity=0.434 Sum_probs=18.5
Q ss_pred HHHHHHHHHH---cCCCccccccccccC
Q 045789 50 VSCMEKALAK---SGVAKEDVNYINAHA 74 (206)
Q Consensus 50 ~~~~~~al~~---Agi~~~dI~~ve~hg 74 (206)
++.+.+||++ .++...||-|||..|
T Consensus 63 qEIl~dAlqQWA~~n~kY~DIPYIEse~ 90 (91)
T PF15127_consen 63 QEILSDALQQWAENNIKYSDIPYIESEG 90 (91)
T ss_pred HHHHHHHHHHHHHhCccccCCCccccCC
Confidence 3456677764 477789999999875
No 220
>PF01890 CbiG_C: Cobalamin synthesis G C-terminus; InterPro: IPR002750 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. CbiG proteins are specific for anaerobic cobalamin biosynthesis. CbiG, which shows homology with CobE of the aerobic pathway, participates in the conversion of cobalt-precorrin 5 into cobalt-precorrin 6 []. CbiG is responsible for the opening of the delta-lactone ring and extrusion of the C2-unit []. The aerobic pathway uses molecular oxygen to trigger the events at C-20 leading to contraction and expulsion of the C2-unit as acetic acid from a metal-free intermediate, whereas the anaerobic route involves the internal delivery of oxygen from a carboxylic acid terminus to C-20 followed by extrusion of the C2-unit as acetaldehyde, using cobalt complexes as substrates []. This entry represents the core domain of CibG.; GO: 0009236 cobalamin biosynthetic process; PDB: 3BY5_A 2W6K_A 2W6L_A 3EEQ_B.
Probab=37.98 E-value=67 Score=23.76 Aligned_cols=38 Identities=18% Similarity=0.283 Sum_probs=26.7
Q ss_pred EEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccc
Q 045789 27 ILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINA 72 (206)
Q Consensus 27 I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~ 72 (206)
+.|.+.+.+ .+...+.+++.++|++.++++.+|+.|-.
T Consensus 3 ~~GiGcrr~--------~~~~~i~~ai~~~l~~~~~~~~~i~~ias 40 (121)
T PF01890_consen 3 VLGIGCRRG--------APAEEIEEAIEQALAEAGLSPRSIAAIAS 40 (121)
T ss_dssp EEEEEE-SS----------HHHHHHHHHHHHHHCT--GGGEEEEEE
T ss_pred EEEeCcCCC--------CCHHHHHHHHHHHHHHcCCChhhccEEEe
Confidence 567777654 34678899999999999999999987653
No 221
>PLN02377 3-ketoacyl-CoA synthase
Probab=37.41 E-value=55 Score=30.53 Aligned_cols=49 Identities=20% Similarity=0.007 Sum_probs=30.4
Q ss_pred CccccccccccCCCCCcCCHhhhhc-ce---ec---cccccccccccccchHHHHH
Q 045789 63 AKEDVNYINAHAPSTRLGDLREYQA-LR---MN---STKSLIGHLLGASGAAEAVA 111 (206)
Q Consensus 63 ~~~dI~~ve~hgtgt~~~D~~E~~a-~~---v~---s~k~~~Gh~~~asG~~~l~~ 111 (206)
..+||+++..|-.|...-|.++..- +. +. ..-..+|++.++|=...|-.
T Consensus 391 ~~~didhf~iHqggr~IId~v~k~LgL~~~~~e~sr~tL~r~GNTSSaSI~~aL~~ 446 (502)
T PLN02377 391 FKLAFDHFCIHAGGRAVIDELEKNLQLLPVHVEASRMTLHRFGNTSSSSIWYELAY 446 (502)
T ss_pred cHhhcCEEEECCCCHHHHHHHHHHcCCCcccchHHHHHHHhcCCchhhHHHHHHHH
Confidence 3589999999988888777765543 21 11 11124677776655444443
No 222
>PLN02577 hydroxymethylglutaryl-CoA synthase
Probab=37.05 E-value=72 Score=29.42 Aligned_cols=30 Identities=30% Similarity=0.477 Sum_probs=20.8
Q ss_pred HHHHHHHHHHc------CCCccccccccccCCCCCc
Q 045789 50 VSCMEKALAKS------GVAKEDVNYINAHAPSTRL 79 (206)
Q Consensus 50 ~~~~~~al~~A------gi~~~dI~~ve~hgtgt~~ 79 (206)
..++++.+++. |+..+|+||+..|-..++.
T Consensus 218 ~~~~~~~~~k~~~~~~~g~~~~d~d~~vfHqP~~km 253 (459)
T PLN02577 218 DSCYKRFCEKYEKLEGKQFSISDADYFVFHAPYNKL 253 (459)
T ss_pred HHHHHHHHHHhhcccccCCCHHHcCEEEecCCccch
Confidence 33444455554 8889999999999775543
No 223
>PF09861 DUF2088: Domain of unknown function (DUF2088); InterPro: IPR018657 This domain, found in various hypothetical proteins, has no known function. ; PDB: 2YJG_B.
Probab=35.50 E-value=61 Score=26.40 Aligned_cols=32 Identities=22% Similarity=0.290 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHcCCCccccccccccCCCCC
Q 045789 47 VGMVSCMEKALAKSGVAKEDVNYINAHAPSTR 78 (206)
Q Consensus 47 ~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~ 78 (206)
..+...+.+-|+.+|+..++|.+|.+.|+--+
T Consensus 71 ~~il~~ll~~L~~~Gv~~~~i~ii~A~G~Hr~ 102 (204)
T PF09861_consen 71 DLILPALLEELEEAGVKDEDITIIIALGTHRP 102 (204)
T ss_dssp HHHHHHHHHHHHT-T-TT-EEEEEEE-TTS--
T ss_pred HHHHHHHHHHHHhcCCCccCEEEEEeCCCCCC
Confidence 56778888888999999999999997766444
No 224
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=34.36 E-value=2.3e+02 Score=25.84 Aligned_cols=72 Identities=17% Similarity=0.212 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHHcCCCccccccccccCCCCCc----CCHhhhhc----ceeccccccccccccccchHHHHHHHHHhhhc
Q 045789 48 GMVSCMEKALAKSGVAKEDVNYINAHAPSTRL----GDLREYQA----LRMNSTKSLIGHLLGASGAAEAVATIKAIQTG 119 (206)
Q Consensus 48 ~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~----~D~~E~~a----~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~ 119 (206)
-...+++.++++++++|++||.|-. |+..+. +...-..+ ++.. +....=.-.++||+-.+..+...++.|
T Consensus 32 L~~~~~~~~l~r~~i~~~~id~vi~-G~~~~~g~~g~n~aR~~al~aglp~~-vp~~tvnr~C~Sgl~ai~~aa~~I~~G 109 (417)
T PRK06025 32 LAATVLKALAERNGLNTADVDDIIW-STSSQRGKQGGDLGRMAALDAGYDIK-ASGVTLDRFCGGGITSVNLAAAQIMSG 109 (417)
T ss_pred HHHHHHHHHHHhcCCCHHHCCEEEE-EcCCCcCcccCcHHHHHHHhCCCCCC-CCeeeeccccchHHHHHHHHHHHHHcC
Confidence 3355889999999999999998654 222222 22222222 2221 111111456889999999999988877
Q ss_pred cc
Q 045789 120 WI 121 (206)
Q Consensus 120 ~i 121 (206)
..
T Consensus 110 ~~ 111 (417)
T PRK06025 110 ME 111 (417)
T ss_pred CC
Confidence 54
No 225
>PRK12404 stage V sporulation protein AD; Provisional
Probab=34.26 E-value=35 Score=30.05 Aligned_cols=65 Identities=18% Similarity=0.186 Sum_probs=39.5
Q ss_pred eEEEEEEccchHHHhcCCce----eEEEEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCccccccccccCC
Q 045789 4 GAGVLLLEELEHAKKRGTNI----YAEILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAHAP 75 (206)
Q Consensus 4 Ga~alvL~~~~~A~~~g~~i----~a~I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~hgt 75 (206)
|++++||.+.. ++-+| .+.|..+++..-.+-. ....++-...|.+=|++-|.+|+|-|.|-.-..
T Consensus 166 gaga~~l~~~~----~~~~i~~~T~Gkv~D~g~~d~~nMG---aaMAPAA~dti~~h~~d~~~~~~~yDlI~TGDL 234 (334)
T PRK12404 166 GAGAAILSKTG----DGPRVTSATIGRVVDMGLTDPFNMG---GAMAPAAVDTIEAHLRDRQIDASYYDLIVTGDL 234 (334)
T ss_pred ceEEEEEecCC----CCceEEEEEEEEEEecCCCCcccch---hhhhHHHHHHHHHHHHHhCCChhhccEEEEcch
Confidence 78889997642 22233 2334444443211111 222456678899999999999999999885433
No 226
>TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade. Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes.
Probab=31.10 E-value=31 Score=31.74 Aligned_cols=30 Identities=7% Similarity=0.245 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHcCCCccccccccccCCCCCc
Q 045789 49 MVSCMEKALAKSGVAKEDVNYINAHAPSTRL 79 (206)
Q Consensus 49 ~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~ 79 (206)
-..+.+++|+++++++++|++|.. +|.|+.
T Consensus 54 a~~AA~~lL~~a~id~~~Id~Liv-~TeS~~ 83 (454)
T TIGR01833 54 CLTVVSKLMERYNIDYNQIGRLEV-GTETII 83 (454)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEE-ECCCCC
Confidence 356889999999999999999984 676653
No 227
>PLN02577 hydroxymethylglutaryl-CoA synthase
Probab=29.78 E-value=31 Score=31.81 Aligned_cols=37 Identities=11% Similarity=0.208 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHcCCCccccccccccCCCCCcCCHhhhhc
Q 045789 49 MVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREYQA 87 (206)
Q Consensus 49 ~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~E~~a 87 (206)
-.++.+++|+++|++|++||.|.. +|.|+. |..-..+
T Consensus 57 A~~AA~~aL~~agid~~~Idlliv-aTeT~~-d~~ps~A 93 (459)
T PLN02577 57 SLTVVKSLLEKYNIDPKQIGRLEV-GSETVI-DKSKSIK 93 (459)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEE-EcCCCC-CCCCchH
Confidence 356889999999999999999883 455542 4333333
No 228
>KOG2707 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones]
Probab=29.09 E-value=49 Score=29.58 Aligned_cols=32 Identities=19% Similarity=0.393 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHcCCCcccccccccc-CCCCC
Q 045789 47 VGMVSCMEKALAKSGVAKEDVNYINAH-APSTR 78 (206)
Q Consensus 47 ~~~~~~~~~al~~Agi~~~dI~~ve~h-gtgt~ 78 (206)
..+.++++++|..|+.+|+|+|.|-+- |.|-+
T Consensus 84 ~ni~~~iqral~aa~~~p~dldaIAVT~gPGl~ 116 (405)
T KOG2707|consen 84 ENIPRLIQRALDAAGLSPKDLDAIAVTRGPGLP 116 (405)
T ss_pred HHHHHHHHHHHHHcCCCcccceeEEEecCCCce
Confidence 455679999999999999999987643 44444
No 229
>PF06277 EutA: Ethanolamine utilisation protein EutA; InterPro: IPR009377 Proteins in this entry are EutA ethanolamine utilization proteins, reactivating factors for ethanolamine ammonia lyase, encoded by the ethanolamine utilization eut operon. The holoenzyme of adenosylcobalamin-dependent ethanolamine ammonia-lyase (EutBC, IPR0092462 from INTERPRO, IPR010628 from INTERPRO), which is part of the ethanolamine utilization pathway [, , ], undergoes suicidal inactivation during catalysis as well as inactivation in the absence of substrate. The inactivation involves the irreversible cleavage of the Co-C bond of the coenzyme. The inactivated holoenzyme undergoes rapid and continuous reactivation in the presence of ATP, Mg2+, and free adenosylcobalamin in permeabilised cells (in situ), homogenate, and cell extracts of Escherichia coli. The EutA protein is essential for reactivation. It was demonstrated with purified recombinant EutA that both the suicidally inactivated and O2-inactivated holoethanolamine ammonia lyase underwent rapid reactivation in vitro by EutA in the presence of adenosylcobalamin, ATP, and Mg2+ []. The inactive enzyme-cyanocobalamin complex was also activated in situ and in vitro by EutA under the same conditions. Thus EutA is believed to be the only component of the reactivating factor for ethanolamine ammonia lyase. Reactivation and activation occur through the exchange of modified coenzyme for free intact adenosylcobalamin []. Bacteria that harbor the ethanolamine utilization pathway can use ethanolamine as a source of carbon and nitrogen. For more information on the ethanolamine utilization pathway, please see IPR009194 from INTERPRO, IPR012408 from INTERPRO.
Probab=27.52 E-value=49 Score=30.60 Aligned_cols=26 Identities=19% Similarity=0.427 Sum_probs=23.9
Q ss_pred CCChHHHHHHHHHHHHHcCCCccccc
Q 045789 43 HPEGVGMVSCMEKALAKSGVAKEDVN 68 (206)
Q Consensus 43 ~~~~~~~~~~~~~al~~Agi~~~dI~ 68 (206)
.-+..+..+.+++-|++||++|+||+
T Consensus 59 ~ID~~al~~iv~~eY~~Agi~p~~I~ 84 (473)
T PF06277_consen 59 EIDAEALKEIVEEEYRKAGITPEDID 84 (473)
T ss_pred ccCHHHHHHHHHHHHHHcCCCHHHCc
Confidence 45789999999999999999999997
No 230
>COG2971 Predicted N-acetylglucosamine kinase [Carbohydrate transport and metabolism]
Probab=27.14 E-value=62 Score=28.15 Aligned_cols=27 Identities=15% Similarity=0.305 Sum_probs=23.2
Q ss_pred ChHHHHHHHHHHHHHcCCCcccccccc
Q 045789 45 EGVGMVSCMEKALAKSGVAKEDVNYIN 71 (206)
Q Consensus 45 ~~~~~~~~~~~al~~Agi~~~dI~~ve 71 (206)
......+++++|+.++|.+|++|+...
T Consensus 47 A~~ni~~ai~~A~~~aG~~~~~i~~~~ 73 (301)
T COG2971 47 AVRNIKDAIREALDEAGLKPDEIAAIV 73 (301)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHhCcee
Confidence 356778899999999999999998755
No 231
>TIGR00329 gcp_kae1 metallohydrolase, glycoprotease/Kae1 family. This subfamily includes the well-studied secreted O-sialoglycoprotein endopeptidase (glycoprotease, EC 3.4.24.57) of Pasteurella haemolytica, a pathogen. A member from Riemerella anatipestifer, associated with cohemolysin activity, likewise is exported without benefit of a classical signal peptide and shows glycoprotease activity on the test substrate glycophorin. However, archaeal members of this subfamily show unrelated activities as demonstrated in Pyrococcus abyssi: DNA binding, iron binding, apurinic endonuclease activity, genomic association with a kinase domain, and no glycoprotease activity. This family thus pulls together a set of proteins as a homology group that appears to be near-universal in life, yet heterogeneous in assayed function between bacteria and archaea.
Probab=25.38 E-value=40 Score=28.99 Aligned_cols=36 Identities=22% Similarity=0.303 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHHcCCCcccccccc-ccCCCCCcCCH
Q 045789 47 VGMVSCMEKALAKSGVAKEDVNYIN-AHAPSTRLGDL 82 (206)
Q Consensus 47 ~~~~~~~~~al~~Agi~~~dI~~ve-~hgtgt~~~D~ 82 (206)
..+...++++|++++++++||++|- .-|.|...+=.
T Consensus 50 ~~l~~~i~~~l~~~~~~~~did~iav~~GPG~~tglr 86 (305)
T TIGR00329 50 ENIPPLLERALIESNVDKSEIDLIAYTQGPGLGGSLR 86 (305)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEecCCCchhhHH
Confidence 4445579999999999999999865 44556554433
No 232
>PF00814 Peptidase_M22: Glycoprotease family; InterPro: IPR000905 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M22 (clan MK). The type example being O-sialoglycoprotein endopeptidase (3.4.24.57 from EC) from Pasteurella haemolytica (Mannheimia haemolytica). O-Sialoglycoprotein endopeptidase is secreted by the bacterium P. haemolytica, and digests only proteins that are heavily sialylated, in particular those with sialylated serine and threonine residues []. Substrate proteins include glycophorin A and leukocyte surface antigens CD34, CD43, CD44 and CD45 [, ]. Removal of glycosylation, by treatment with neuraminidase, completely negates susceptibility to O-sialoglycoprotein endopeptidase digestion [, ]. Sequence similarity searches have revealed other members of the M22 family, from yeast, Mycobacterium, Haemophilus influenzae and the cyanobacterium Synechocystis []. The zinc-binding and catalytic residues of this family have not been determined, although the motif HMEGH may be a zinc-binding region [].; GO: 0004222 metalloendopeptidase activity, 0006508 proteolysis; PDB: 2A6A_A 2GEL_G 2GEM_B 1OKJ_B 3ENO_A 3EN9_B 2VWB_B 3ENH_B 2IVO_D 2IVP_A ....
Probab=24.66 E-value=63 Score=27.28 Aligned_cols=32 Identities=19% Similarity=0.400 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHHHcCCCccccccccc-cCCCCC
Q 045789 47 VGMVSCMEKALAKSGVAKEDVNYINA-HAPSTR 78 (206)
Q Consensus 47 ~~~~~~~~~al~~Agi~~~dI~~ve~-hgtgt~ 78 (206)
..+...++++|++++++++|||+|-+ -|.|..
T Consensus 31 ~~L~~~i~~~l~~~~~~~~did~iavt~GPGsf 63 (268)
T PF00814_consen 31 ENLPPLIEELLKEAGISLSDIDAIAVTRGPGSF 63 (268)
T ss_dssp HHHHHHHHHHHHHHTS-GGGESEEEEEEESS-H
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEecCCCcc
Confidence 44556889999999999999998663 355554
No 233
>TIGR03722 arch_KAE1 universal archaeal protein Kae1. This family represents the archaeal protein Kae1. Its partner Bud32 is fused with it in about half of the known archaeal genomes. The pair, which appears universal in the archaea, corresponds to EKC/KEOPS complex in eukaryotes. A recent characterization of the member from Pyrococcus abyssi, as an iron-binding, atypical DNA-binding protein with an apurinic lyase activity, challenges the common annotation of close homologs as O-sialoglycoprotein endopeptidase. The latter annotation is based on a characterized protein from the bacterium Pasteurella haemolytica.
Probab=24.20 E-value=57 Score=28.28 Aligned_cols=26 Identities=23% Similarity=0.349 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHcCCCcccccccccc
Q 045789 48 GMVSCMEKALAKSGVAKEDVNYINAH 73 (206)
Q Consensus 48 ~~~~~~~~al~~Agi~~~dI~~ve~h 73 (206)
.+-..++++|+++|++++|||+|-..
T Consensus 48 ~l~~~i~~~l~~~~~~~~did~Iavt 73 (322)
T TIGR03722 48 VAPKLIKEALEEAGVSLEDIDAVAFS 73 (322)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEe
Confidence 35568999999999999999987654
No 234
>KOG0103 consensus Molecular chaperones HSP105/HSP110/SSE1, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones]
Probab=24.00 E-value=59 Score=31.49 Aligned_cols=36 Identities=22% Similarity=0.285 Sum_probs=28.9
Q ss_pred HHHHHHHHHHcCCCccccccccccCCCCCcCCHhhh
Q 045789 50 VSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLREY 85 (206)
Q Consensus 50 ~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~E~ 85 (206)
..-+.++|++++++.+||+.||.-|.+|+.=-.-|.
T Consensus 317 ~~p~~~~l~d~~l~~edi~~VEiVGg~sripaike~ 352 (727)
T KOG0103|consen 317 EVPLLKALADAKLKVEDIHAVEIVGGLSRIPAIKEM 352 (727)
T ss_pred hHHHHHHHHHhcCccccceeEEEecCcccchHHHHH
Confidence 346788999999999999999999998875444343
No 235
>PRK14878 UGMP family protein; Provisional
Probab=23.98 E-value=57 Score=28.37 Aligned_cols=26 Identities=27% Similarity=0.422 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHcCCCcccccccccc
Q 045789 48 GMVSCMEKALAKSGVAKEDVNYINAH 73 (206)
Q Consensus 48 ~~~~~~~~al~~Agi~~~dI~~ve~h 73 (206)
.+-..++++|+++|++++|||+|-+.
T Consensus 47 ~l~~~i~~~l~~a~~~~~did~Iavt 72 (323)
T PRK14878 47 VAPELLRKALEKAGISIEDIDAVAVS 72 (323)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEe
Confidence 35578899999999999999987654
No 236
>PTZ00340 O-sialoglycoprotein endopeptidase-like protein; Provisional
Probab=23.93 E-value=45 Score=29.58 Aligned_cols=56 Identities=13% Similarity=0.157 Sum_probs=35.4
Q ss_pred hHHHHHHHHHHHHHcCCCcccccccc-ccCCCCCcCCHhhhhc---------ceeccccccccccc
Q 045789 46 GVGMVSCMEKALAKSGVAKEDVNYIN-AHAPSTRLGDLREYQA---------LRMNSTKSLIGHLL 101 (206)
Q Consensus 46 ~~~~~~~~~~al~~Agi~~~dI~~ve-~hgtgt~~~D~~E~~a---------~~v~s~k~~~Gh~~ 101 (206)
...+-..++++|++++++++|||.|- ..|.|...+=.+=... +|+-.+...-||..
T Consensus 50 ~~~l~~~i~~~l~~a~~~~~did~Iavt~GPGl~~~LrVG~~~Ak~LA~a~~~PligV~HlegHi~ 115 (345)
T PTZ00340 50 REHILSLVKEALEEAKITPSDISLICYTKGPGMGAPLSVGAVVARTLSLLWGKPLVGVNHCVAHIE 115 (345)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCcHhhHHHHHHHHHHHHHHcCCCEeecchHHHHHH
Confidence 34556688999999999999999865 4566654333332211 45555555555554
No 237
>PRK13410 molecular chaperone DnaK; Provisional
Probab=23.79 E-value=66 Score=31.04 Aligned_cols=38 Identities=21% Similarity=0.348 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHHcCCCccccccccccCCCCCcCCHhh
Q 045789 47 VGMVSCMEKALAKSGVAKEDVNYINAHAPSTRLGDLRE 84 (206)
Q Consensus 47 ~~~~~~~~~al~~Agi~~~dI~~ve~hgtgt~~~D~~E 84 (206)
....+.++++|+++|++++||+.|++.|-++..=-..+
T Consensus 309 ~r~~~~i~~~L~~ag~~~~dId~VvLVGGssRiP~V~~ 346 (668)
T PRK13410 309 DRLLRPVKRALKDAGLSPEDIDEVVLVGGSTRMPMVQQ 346 (668)
T ss_pred HHHHHHHHHHHHHcCCChhhCcEEEEECCccccHHHHH
Confidence 34456788999999999999999999998887543333
No 238
>COG3360 Uncharacterized conserved protein [Function unknown]
Probab=23.72 E-value=42 Score=22.59 Aligned_cols=29 Identities=7% Similarity=0.295 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHHcCCCccccccccccCC
Q 045789 47 VGMVSCMEKALAKSGVAKEDVNYINAHAP 75 (206)
Q Consensus 47 ~~~~~~~~~al~~Agi~~~dI~~ve~hgt 75 (206)
.++..+++.|+.+|.=+.++++.+|.-.+
T Consensus 17 ~S~d~Ai~~Ai~RA~~t~~~l~wfeV~~~ 45 (71)
T COG3360 17 TSIDAAIANAIARAADTLDNLDWFEVVET 45 (71)
T ss_pred ccHHHHHHHHHHHHHhhhhcceEEEEEee
Confidence 46789999999999999999999887643
No 239
>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism]
Probab=23.60 E-value=2.4e+02 Score=24.51 Aligned_cols=65 Identities=18% Similarity=0.318 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHHcCCCccccc-----cccccCCCCCcCCHhhhhc----ceeccccccccccccccchHHHHHHHHHhh
Q 045789 47 VGMVSCMEKALAKSGVAKEDVN-----YINAHAPSTRLGDLREYQA----LRMNSTKSLIGHLLGASGAAEAVATIKAIQ 117 (206)
Q Consensus 47 ~~~~~~~~~al~~Agi~~~dI~-----~ve~hgtgt~~~D~~E~~a----~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~ 117 (206)
+-.++++.+||++++|..++|+ |+....| -|...-++. +||-.+.- -.++|...|..+-..++
T Consensus 31 d~a~ea~tkal~da~ikys~vqqa~vgyvfgdst---cgqraiyevgmtgipi~nvnn-----ncatgssalflakqiie 102 (408)
T KOG1406|consen 31 DFAKEAITKALQDAGIKYSEVQQAVVGYVFGDST---CGQRAIYEVGMTGIPIYNVNN-----NCATGSSALFLAKQIIE 102 (408)
T ss_pred hHHHHHHHHHHHhcCCCHHHHHhhhheeeecCCc---cchHHHHhccccCcceeeccC-----ccccCchHHHHHHHHHh
Confidence 4557899999999999998875 4432221 111111111 55555543 36778888887777777
Q ss_pred hc
Q 045789 118 TG 119 (206)
Q Consensus 118 ~~ 119 (206)
.|
T Consensus 103 sg 104 (408)
T KOG1406|consen 103 SG 104 (408)
T ss_pred cC
Confidence 66
No 240
>cd02198 YjgH_like YjgH belongs to a large family of YjgF/YER057c/UK114-like proteins present in bacteria, archaea, and eukaryotes with no definitive function. The conserved domain is similar in structure to chorismate mutase but there is no sequence similarity and no functional connection. Members of this family have been implicated in isoleucine (Yeo7, Ibm1, aldR) and purine (YjgF) biosynthesis, as well as threonine anaerobic degradation (tdcF) and mitochondrial DNA maintenance (Ibm1). This domain homotrimerizes forming a distinct intersubunit cavity that may serve as a small molecule binding site.
Probab=22.73 E-value=47 Score=23.84 Aligned_cols=23 Identities=17% Similarity=0.275 Sum_probs=17.4
Q ss_pred HHHHHHHHHcCCCcccccccccc
Q 045789 51 SCMEKALAKSGVAKEDVNYINAH 73 (206)
Q Consensus 51 ~~~~~al~~Agi~~~dI~~ve~h 73 (206)
+-++++|+.+|.+.+||--+...
T Consensus 40 ~ni~~~L~~aG~~~~dvvk~~vy 62 (111)
T cd02198 40 QNLGAVLEAAGCSFDDVVELTTF 62 (111)
T ss_pred HHHHHHHHHcCCCHHHEEEEEEE
Confidence 35688889999999988665543
No 241
>PF14518 Haem_oxygenas_2: Iron-containing redox enzyme; PDB: 3BJD_B.
Probab=22.59 E-value=73 Score=22.39 Aligned_cols=27 Identities=26% Similarity=0.496 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHcCCCcccccccccc
Q 045789 47 VGMVSCMEKALAKSGVAKEDVNYINAH 73 (206)
Q Consensus 47 ~~~~~~~~~al~~Agi~~~dI~~ve~h 73 (206)
....+.+.++|++-|++.+++.|+..|
T Consensus 78 ~~~~~~~~~~l~r~g~~~~~~~yf~~H 104 (106)
T PF14518_consen 78 PQIYRRLIKGLRRLGLDEEDLEYFDLH 104 (106)
T ss_dssp HHHHHHHHHHHHHTT--TTTTHHHHTT
T ss_pred hHHHHHHHHHHHHcCCCccccchhhhc
Confidence 344567778999999999999999887
No 242
>KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=22.50 E-value=2.9e+02 Score=24.60 Aligned_cols=72 Identities=25% Similarity=0.249 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHHcCCCcccccccc-ccCCCCCcCCHhhhhc-----ceeccccccccccccccchHHHHHHHHHhhhcc
Q 045789 48 GMVSCMEKALAKSGVAKEDVNYIN-AHAPSTRLGDLREYQA-----LRMNSTKSLIGHLLGASGAAEAVATIKAIQTGW 120 (206)
Q Consensus 48 ~~~~~~~~al~~Agi~~~dI~~ve-~hgtgt~~~D~~E~~a-----~~v~s~k~~~Gh~~~asG~~~l~~~~l~l~~~~ 120 (206)
--..+|+.+|+++.++++|++-|. -|-...-.|...-..+ ++..-.-. .=+-..+|||=.++.+..+++.|.
T Consensus 33 Lgsvaikaalera~v~~~~v~eVi~GnVl~AnlGQapaRQaalgAGlp~sv~~t-TvNkvCaSgmKAv~laaQsI~~G~ 110 (396)
T KOG1390|consen 33 LGSVAIKAALERAVVPPSDVAEVIFGNVLSANLGQAPARQAALGAGLPYSVPAT-TVNKVCASGMKAVILAAQSIQTGH 110 (396)
T ss_pred HHHHHHHHHHHhcCCCHHHhhhhhhccccccccCcchHHHHHhhcCCCcceeeE-eehhhhhhhHHHHHHHHHHHhcCC
Confidence 346689999999999999885332 2212222222222222 33221111 124567889999998888887763
No 243
>PRK07027 cobalamin biosynthesis protein CbiG; Provisional
Probab=22.12 E-value=1e+02 Score=22.90 Aligned_cols=39 Identities=18% Similarity=0.147 Sum_probs=29.3
Q ss_pred EEEEEecCCCCCCCCCCCChHHHHHHHHHHHHHcCCCcccccccccc
Q 045789 27 ILDGSLTCDAYHITAPHPEGVGMVSCMEKALAKSGVAKEDVNYINAH 73 (206)
Q Consensus 27 I~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~Agi~~~dI~~ve~h 73 (206)
+.|.+...+ .+...+..+++++|++.++.+.+|..+-+.
T Consensus 5 ~vGIGcr~~--------~~~e~i~~ai~~~L~~~~l~~~si~~lasi 43 (126)
T PRK07027 5 ALGIGCRRG--------VPAEQIEAAIRAALAQRPLASADVRVVATL 43 (126)
T ss_pred EEeeccCCC--------CCHHHHHHHHHHHHHHcCCCHHHhheeEeh
Confidence 456665543 345678999999999999999998876643
No 244
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=20.93 E-value=1.9e+02 Score=25.29 Aligned_cols=74 Identities=18% Similarity=0.092 Sum_probs=43.4
Q ss_pred HHHHHHHHHHcC-CCccccccccccCCC---CCcCCHhhhhc----ceecc-c-ccccc-ccccccchHHHHHHHHHhhh
Q 045789 50 VSCMEKALAKSG-VAKEDVNYINAHAPS---TRLGDLREYQA----LRMNS-T-KSLIG-HLLGASGAAEAVATIKAIQT 118 (206)
Q Consensus 50 ~~~~~~al~~Ag-i~~~dI~~ve~hgtg---t~~~D~~E~~a----~~v~s-~-k~~~G-h~~~asG~~~l~~~~l~l~~ 118 (206)
.++++++|++++ +++++|++|-.-+++ +..-|.....+ -.++. . ...+= ....++|+..|..+...|+.
T Consensus 70 ~~Al~~aL~~a~~~~~~~i~lil~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~~~~~~~i~~~casg~~Al~~A~~~i~~ 149 (348)
T PRK06147 70 APAIAEALEGLPALDASEAPLLLCVAEEERPGRPPDLEERLLRELEARLGLRLEPGSAVIARGRVSGAVALAQARRLIAA 149 (348)
T ss_pred HHHHHHHHHhcccccccCCcEEEEeCchhcCCCCcchHHHHHHHHHHHhCCCCCCCcccccccchHHHHHHHHHHHHHHc
Confidence 468899999999 799999997764331 11112222111 11121 0 01111 12467889999999999988
Q ss_pred cccCC
Q 045789 119 GWIHP 123 (206)
Q Consensus 119 ~~ipp 123 (206)
|....
T Consensus 150 G~~~~ 154 (348)
T PRK06147 150 GGCPR 154 (348)
T ss_pred CCCCE
Confidence 76543
No 245
>COG0752 GlyQ Glycyl-tRNA synthetase, alpha subunit [Translation, ribosomal structure and biogenesis]
Probab=20.86 E-value=82 Score=26.77 Aligned_cols=29 Identities=14% Similarity=0.334 Sum_probs=26.1
Q ss_pred CCChHHHHHHHHHHHHHcCCCc--ccccccc
Q 045789 43 HPEGVGMVSCMEKALAKSGVAK--EDVNYIN 71 (206)
Q Consensus 43 ~~~~~~~~~~~~~al~~Agi~~--~dI~~ve 71 (206)
.|++..+.+.....|+.-||+| -||.|||
T Consensus 86 KPsP~NiQeLYL~SL~~lGid~~~HDIRFVE 116 (298)
T COG0752 86 KPSPDNIQELYLGSLEALGIDPLEHDIRFVE 116 (298)
T ss_pred cCCCccHHHHHHHHHHHcCCChhhcceeeec
Confidence 5778899999999999999998 5888988
Done!