Citrus Sinensis ID: 045790

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-
Protein Sequence
MVEVAYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTMPNLPSKMHVPSYHVPTPSVSYGEPFITNSSFEVGR
Secondary Structure (PSIPRED)
cEEEEccccccccccccccccccccccccccccccccccccccEEccccccccHHHHcccccccccccHHHHHHHHHHHHccccccccHHHHccccccccccccccccccccccccccHHccccccccccHHHHHHHHHHccccccHHHcccccccccHHHHHHHHHHHHHHccccccccccHHHHHHHHccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cEEEEEEcHHccccccccHHccccHcHccHHHEcccccccEEEEEEccHccccHHHHHccccccHHHHHHHHEEEEEHHccccccccccccccEEEEEEcccccccccHHHHHHHHHHHHcccccccccHHHHHHHHHHHHcccHHHHccccccccccHHHHHHHHHHHHHHccccHcHcccHHHHHHHHccccccccccccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
mvevaysrspelppgrgdfnfnaklgdfglarlmdhelgpktIMLVGTLAYMASEYistgrvskelDVFSFRVVALEIATGRKVINRYKAQKlrtqfvvphpcsntgsveklgvegekavlggssknycpKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCLLIVGLwcahpdrcfrpSIRQAIQVLNfettmpnlpskmhvpsyhvptpsvsygepfitnssfevgr
Flexible Loop (DISEMBL)
mvevaysrspelppgrgdFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVINRYKAQklrtqfvvphpcsntgsveklgVEGEKAvlggssknycPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTMPNLPSKMHVPSYHvptpsvsygepfitnssfevgr
Low Complexity Region (SEG)
MVEVAYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTMPNLPSKMHVPSYHVPTPSVSYGEPFITNSSFEVGR
Disordered region (IsUnstruct)
******************FNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTMP**********************************
Disordered Region (DISOPRED)
*VE**YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVIN***********VVPHPCSNTGSVEKLGVE********SSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTMPNLP************************S*FEVGR
Disordered Region (DISEMBL)
**********ELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTMPNLPSKMHVPSYHVPTPSVSYGEPFITNSSFEVGR
Disordered Region (DISPRO)
MVEVAYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCLLIVGLWCAHPDRCFRPS*RQAIQVLNFETTM***********************************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MVEVAYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTMPNLPSKMHVPSYHVPTPSVSYGEPFITNSSFEVGR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	231	2.2.26 [Sep-21-2011]
Q9LXA5	651	L-type lectin-domain cont	yes	no	0.683	0.242	0.523	5e-48
Q9LSL5	675	L-type lectin-domain cont	no	no	0.709	0.242	0.443	2e-40
Q9LFH9	715	L-type lectin-domain cont	no	no	0.662	0.213	0.404	3e-32
Q9FHG4	681	Probable L-type lectin-do	no	no	0.610	0.207	0.403	5e-31
Q9LYX1	711	L-type lectin-domain cont	no	no	0.658	0.213	0.387	3e-29
O81292	674	L-type lectin-domain cont	no	no	0.636	0.218	0.335	5e-23
O81291	669	L-type lectin-domain cont	no	no	0.636	0.219	0.340	6e-23
Q9FHX3	691	L-type lectin-domain cont	no	no	0.627	0.209	0.329	1e-21
O80939	675	L-type lectin-domain cont	no	no	0.636	0.217	0.335	2e-21
Q9FG33	652	Probable L-type lectin-do	no	no	0.662	0.234	0.320	2e-21

>sp|Q9LXA5|LRK91_ARATH L-type lectin-domain containing receptor kinase IX.1 OS=Arabidopsis thaliana GN=LECRK91 PE=2 SV=1

 Score =  191 bits (484), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 101/193 (52%), Positives = 123/193 (63%), Gaps = 35/193 (18%)

Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALE 77
           D NFNAKLGDFGLARLMDHELGP+T  L GT  YMA EYISTGR SKE DV+SF VV LE
Sbjct: 468 DSNFNAKLGDFGLARLMDHELGPQTTGLAGTFGYMAPEYISTGRASKESDVYSFGVVTLE 527

Query: 78  IATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVW 137
           I TGRK ++R + +          P +N                          LV  +W
Sbjct: 528 IVTGRKSVDRRQGR--------VEPVTN--------------------------LVEKMW 553

Query: 138 DLYGERKLLSAANERLD-SRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTM 196
           DLYG+ ++++A +E+L    FDE+Q  CL+IVGLWCAHPD   RPSI+QAIQVLN E  +
Sbjct: 554 DLYGKGEVITAIDEKLRIGGFDEKQAECLMIVGLWCAHPDVNTRPSIKQAIQVLNLEAPV 613

Query: 197 PNLPSKMHVPSYH 209
           P+LP+KM V +YH
Sbjct: 614 PHLPTKMPVATYH 626

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q9LSL5|LRK92_ARATH L-type lectin-domain containing receptor kinase IX.2 OS=Arabidopsis thaliana GN=LECRK92 PE=2 SV=1

 Score =  166 bits (419), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 86/194 (44%), Positives = 117/194 (60%), Gaps = 30/194 (15%)

Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALE 77
           D  FN KLGDFGLARLM+HELG  T  L GT  YMA EY+  G  SKE D++SF +V LE
Sbjct: 484 DSEFNVKLGDFGLARLMNHELGSHTTGLAGTFGYMAPEYVMKGSASKESDIYSFGIVLLE 543

Query: 78  IATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVW 137
           I TGRK + R +     T+                  + EK+            LV  VW
Sbjct: 544 IVTGRKSLERTQEDNSDTE-----------------SDDEKS------------LVEKVW 574

Query: 138 DLYGERKLL-SAANERLDSRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTM 196
           +LYG+++L+ S  +++L   FD+++  CLL++GLWCAHPD+  RPSI+Q IQV+NFE+ +
Sbjct: 575 ELYGKQELITSCVDDKLGEDFDKKEAECLLVLGLWCAHPDKNSRPSIKQGIQVMNFESPL 634

Query: 197 PNLPSKMHVPSYHV 210
           P+LP K  V  Y++
Sbjct: 635 PDLPLKRPVAMYYI 648

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9LFH9|LRK81_ARATH L-type lectin-domain containing receptor kinase VIII.1 OS=Arabidopsis thaliana GN=LECRK81 PE=1 SV=1

 Score =  138 bits (348), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 74/183 (40%), Positives = 106/183 (57%), Gaps = 30/183 (16%)

Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALE 77
           D +FNAKLGDFGLAR ++H+  P+  +  GT+ Y+A EY+ TGR S++ DVFS+  V LE
Sbjct: 509 DESFNAKLGDFGLARQIEHDKSPEATVAAGTMGYLAPEYLLTGRASEKTDVFSYGAVVLE 568

Query: 78  IATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVW 137
           + +GR+ I +     L  Q               +GV               P LV WVW
Sbjct: 569 VVSGRRPIEK----DLNVQ------------RHNVGVN--------------PNLVEWVW 598

Query: 138 DLYGERKLLSAANERLDSRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTMP 197
            LY E K+ +AA+ RL+ +FDE +M  +L+VGL C+HPD  FRP++R  +Q+L  E  +P
Sbjct: 599 GLYKEGKVSAAADSRLEGKFDEGEMWRVLVVGLACSHPDPAFRPTMRSVVQMLIGEADVP 658

Query: 198 NLP 200
            +P
Sbjct: 659 VVP 661

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9FHG4|LRKS7_ARATH Probable L-type lectin-domain containing receptor kinase S.7 OS=Arabidopsis thaliana GN=LECRKS7 PE=2 SV=1

 Score =  134 bits (337), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 71/176 (40%), Positives = 98/176 (55%), Gaps = 35/176 (19%)

Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALE 77
           D NFNA+LGDFGLARL +H+  P + +  GT+ Y+A EY+  G  +++ D FS+ VV LE
Sbjct: 502 DINFNARLGDFGLARLTEHDKSPVSTLTAGTMGYLAPEYLQYGTATEKTDAFSYGVVILE 561

Query: 78  IATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVW 137
           +A GR+ I++                           E +K V           LV WVW
Sbjct: 562 VACGRRPIDKEP-------------------------ESQKTV----------NLVDWVW 586

Query: 138 DLYGERKLLSAANERLDSRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFE 193
            L+ E ++L A +ERL   FDE+ M  LL+VGL CAHPD   RPS+R+ +Q+LN E
Sbjct: 587 RLHSEGRVLEAVDERLKGEFDEEMMKKLLLVGLKCAHPDSNERPSMRRVLQILNNE 642

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9LYX1|LRK82_ARATH L-type lectin-domain containing receptor kinase VIII.2 OS=Arabidopsis thaliana GN=LECRK82 PE=2 SV=1

 Score =  128 bits (322), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 71/183 (38%), Positives = 99/183 (54%), Gaps = 31/183 (16%)

Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALE 77
           D NFN KLGDFGLAR  +H+  P      GT+ Y+A EY+ TGR +++ DVFS+  V LE
Sbjct: 506 DANFNPKLGDFGLARQTEHDKSPDATAAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLE 565

Query: 78  IATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVW 137
           + TGR+ I R +          P P                    G        LV WVW
Sbjct: 566 VCTGRRPITRPE----------PEP--------------------GLRPGLRSSLVDWVW 595

Query: 138 DLYGERKLLSAANERLDSRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTMP 197
            LY E KLL+A +ERL S F+ ++M+ +++VGL C+ PD   RP++R  +Q+L  E  +P
Sbjct: 596 GLYREGKLLTAVDERL-SEFNPEEMSRVMMVGLACSQPDPVTRPTMRSVVQILVGEADVP 654

Query: 198 NLP 200
            +P
Sbjct: 655 EVP 657

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O81292|LRK43_ARATH L-type lectin-domain containing receptor kinase IV.3 OS=Arabidopsis thaliana GN=LECRK43 PE=2 SV=1

 Score =  107 bits (268), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 61/182 (33%), Positives = 98/182 (53%), Gaps = 35/182 (19%)

Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALE 77
           D  +N +LGDFGLARL DH   P+T  +VGT  Y+A +++ TGR +   DVF+F V+ LE
Sbjct: 489 DAEYNGRLGDFGLARLCDHGSDPQTTRVVGTWGYLAPDHVRTGRATTATDVFAFGVLLLE 548

Query: 78  IATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVW 137
           +A GR+ I                         ++ +E +++VL          LV  V+
Sbjct: 549 VACGRRPI-------------------------EIEIESDESVL----------LVDSVF 573

Query: 138 DLYGERKLLSAANERLDSRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTMP 197
             + E  +L A +  L S +D++++  +L +GL C+H D   RP++RQ +Q L  + T+P
Sbjct: 574 GFWIEGNILDATDPNLGSVYDQREVETVLKLGLLCSHSDPQVRPTMRQVLQYLRGDATLP 633

Query: 198 NL 199
           +L
Sbjct: 634 DL 635

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O81291|LRK44_ARATH L-type lectin-domain containing receptor kinase IV.4 OS=Arabidopsis thaliana GN=LECRK44 PE=3 SV=1

 Score =  107 bits (267), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 62/182 (34%), Positives = 95/182 (52%), Gaps = 35/182 (19%)

Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALE 77
           D   N +LGDFGLA+L DH   P+T  +VGT  Y+A ++I TGR +   DVF+F V+ LE
Sbjct: 484 DAELNGRLGDFGLAQLCDHGSDPQTTRVVGTWGYLAPDHIRTGRATTTTDVFAFGVLLLE 543

Query: 78  IATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVW 137
           +A GR+ I      ++  Q                   GE+ V           LV WV+
Sbjct: 544 VACGRRPI------EINNQ------------------SGERVV-----------LVDWVF 568

Query: 138 DLYGERKLLSAANERLDSRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTMP 197
             + E  +L A +  L S +D++++  +L +GL C+H D   RP++RQ +Q L  +  +P
Sbjct: 569 RFWMEANILDAKDPNLGSEYDQKEVEMVLKLGLLCSHSDPLARPTMRQVLQYLRGDAMLP 628

Query: 198 NL 199
           +L
Sbjct: 629 DL 630

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9FHX3|LRKS6_ARATH L-type lectin-domain containing receptor kinase S.6 OS=Arabidopsis thaliana GN=LECRKS6 PE=2 SV=1

 Score =  103 bits (256), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 62/188 (32%), Positives = 93/188 (49%), Gaps = 43/188 (22%)

Query: 18  DFNFNAKLGDFGLARLMDHEL---GPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVV 74
           D  FNAKLGDFGLA + +H     G    +  GT+ Y+A EY+ TG  S++ DV+SF VV
Sbjct: 509 DAEFNAKLGDFGLAEIYEHSALLAGRAATLPAGTMGYLAPEYVYTGVPSEKTDVYSFGVV 568

Query: 75  ALEIATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVA 134
            LE+ TGR+                  P  + G+V                      LV 
Sbjct: 569 VLEVCTGRR------------------PVGDDGAV----------------------LVD 588

Query: 135 WVWDLYGERKLLSAANERLDSRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFET 194
            +W  +   K+L  A+  L   FD ++M  +L+VG+ CAHPD   RP ++ A++++  E 
Sbjct: 589 LMWSHWETGKVLDGADIMLREEFDAEEMERVLMVGMVCAHPDSEKRPRVKDAVRIIRGEA 648

Query: 195 TMPNLPSK 202
            +P LP++
Sbjct: 649 PLPVLPAR 656

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O80939|LRK41_ARATH L-type lectin-domain containing receptor kinase IV.1 OS=Arabidopsis thaliana GN=LECRK41 PE=1 SV=1

 Score =  102 bits (255), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 61/182 (33%), Positives = 90/182 (49%), Gaps = 35/182 (19%)

Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALE 77
           D   N +LGDFGLARL DH   P+T  +VGTL Y+A E+  TGR +   DVF+F    LE
Sbjct: 481 DGELNGRLGDFGLARLYDHGSDPQTTHVVGTLGYLAPEHTRTGRATMATDVFAFGAFLLE 540

Query: 78  IATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVW 137
           +A GR+ I                         +   E ++  L          LV WV+
Sbjct: 541 VACGRRPI-------------------------EFQQETDETFL----------LVDWVF 565

Query: 138 DLYGERKLLSAANERLDSRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTMP 197
            L+ +  +L+A +  + S  DE+++  +L +GL C+H D   RPS+RQ +  L  +  +P
Sbjct: 566 GLWNKGDILAAKDPNMGSECDEKEVEMVLKLGLLCSHSDPRARPSMRQVLHYLRGDAKLP 625

Query: 198 NL 199
            L
Sbjct: 626 EL 627

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9FG33|LRKS5_ARATH Probable L-type lectin-domain containing receptor kinase S.5 OS=Arabidopsis thaliana GN=LECRKS5 PE=2 SV=1

 Score =  102 bits (254), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 60/187 (32%), Positives = 96/187 (51%), Gaps = 34/187 (18%)

Query: 18  DFNFNAKLGDFGLARLMDHE--LGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVA 75
           D +FNAKLGDFGLAR++         T  + GT  YMA E    GR + E DV++F V+ 
Sbjct: 464 DSDFNAKLGDFGLARMIQQSEMTHHSTKEIAGTPGYMAPETFLNGRATVETDVYAFGVLM 523

Query: 76  LEIATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAW 135
           LE+ +G+K             +V+     N                     NY   +V W
Sbjct: 524 LEVVSGKK-----------PSYVLVKDNQN---------------------NYNNSIVNW 551

Query: 136 VWDLYGERKLLSAANERLDSRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETT 195
           +W+LY    +  AA+  + + FD+++M  +L++GL C HP+   RPS++  ++VL  ET+
Sbjct: 552 LWELYRNGTITDAADPGMGNLFDKEEMKSVLLLGLACCHPNPNQRPSMKTVLKVLTGETS 611

Query: 196 MPNLPSK 202
            P++P++
Sbjct: 612 PPDVPTE 618

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	231
255572597	584	kinase, putative [Ricinus communis] gi|2	0.779	0.308	0.556	1e-59
224074307	651	predicted protein [Populus trichocarpa]	0.766	0.271	0.556	1e-58
255572593	672	kinase, putative [Ricinus communis] gi|2	0.770	0.264	0.532	1e-54
255572599	652	kinase, putative [Ricinus communis] gi|2	0.770	0.273	0.523	3e-54
255572603	632	kinase, putative [Ricinus communis] gi|2	0.770	0.281	0.518	4e-52
449460702	649	PREDICTED: L-type lectin-domain containi	0.766	0.272	0.523	7e-52
449484066	651	PREDICTED: LOW QUALITY PROTEIN: L-type l	0.766	0.271	0.523	7e-52
357517131	655	Cysteine-rich receptor-like protein kina	0.748	0.264	0.519	7e-52
357517145	651	Cysteine-rich receptor-like protein kina	0.748	0.265	0.519	9e-52
449531003	659	PREDICTED: LOW QUALITY PROTEIN: L-type l	0.766	0.268	0.518	2e-50

>gi|255572597|ref|XP_002527232.1| kinase, putative [Ricinus communis] gi|223533408|gb|EEF35158.1| kinase, putative [Ricinus communis]

 Score =  235 bits (599), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 119/214 (55%), Positives = 142/214 (66%), Gaps = 34/214 (15%)

Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALE 77
           D NFN KLGDFGLARLMDHELGP+T  L GTL Y+A EYISTGR SKE DV+SF +VALE
Sbjct: 405 DSNFNVKLGDFGLARLMDHELGPQTTGLAGTLGYLAPEYISTGRASKESDVYSFGIVALE 464

Query: 78  IATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVW 137
           IATG+KV++                      VE+    G++             L+ W+W
Sbjct: 465 IATGKKVVD---------------------PVEEKSQSGKR-------------LIEWIW 490

Query: 138 DLYGERKLLSAANERLDSRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTMP 197
           DLYG  KL SA +ERL   FD+++   L++VGLWCAHPD   RPSIRQAI VLNFE  +P
Sbjct: 491 DLYGTGKLSSAVDERLCQDFDKEEAESLMVVGLWCAHPDYNLRPSIRQAIHVLNFEAALP 550

Query: 198 NLPSKMHVPSYHVPTPSVSYGEPFITNSSFEVGR 231
           NLP +M VP YH+PTPSVS GEPF++NSS E GR
Sbjct: 551 NLPLQMPVPLYHLPTPSVSSGEPFMSNSSLEAGR 584

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224074307|ref|XP_002304348.1| predicted protein [Populus trichocarpa] gi|222841780|gb|EEE79327.1| predicted protein [Populus trichocarpa]

 Score =  231 bits (590), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 119/214 (55%), Positives = 140/214 (65%), Gaps = 37/214 (17%)

Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALE 77
           D +FN KLGDFGLARLMDHELGP+T  L GTL Y+A EYISTGR SKE DV+SF +V+LE
Sbjct: 475 DSSFNVKLGDFGLARLMDHELGPQTTGLAGTLGYLAPEYISTGRASKESDVYSFGMVSLE 534

Query: 78  IATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVW 137
           IATGRK ++                           +E +  +           LV W+W
Sbjct: 535 IATGRKAVD--------------------------AIEQKSEM----------SLVEWIW 558

Query: 138 DLYGERKLLSAANERLDSRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTMP 197
           DLYG  KL  A +E+L S FDE QM CL+IVGLWCAHPDR  RPSIRQAI VLNFE  +P
Sbjct: 559 DLYGTGKLNLAVDEKLQSEFDENQMECLMIVGLWCAHPDRNIRPSIRQAIHVLNFEAPLP 618

Query: 198 NLPSKMHVPSYHVPTPSVSYGEPFITNSSFEVGR 231
           NLP+KM VP YHVPTP +S GEP I++ S +VGR
Sbjct: 619 NLPTKMPVPLYHVPTPPLSSGEPLISH-SMDVGR 651

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255572593|ref|XP_002527230.1| kinase, putative [Ricinus communis] gi|223533406|gb|EEF35156.1| kinase, putative [Ricinus communis]

 Score =  218 bits (555), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 114/214 (53%), Positives = 140/214 (65%), Gaps = 36/214 (16%)

Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALE 77
           D +FN KLGDFGLARLMDHELGP+T  L GTL Y+A EYISTGR SK+ DV+SF VV LE
Sbjct: 495 DSSFNVKLGDFGLARLMDHELGPQTTGLAGTLGYLAPEYISTGRASKDSDVYSFGVVCLE 554

Query: 78  IATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVW 137
           IA+GRK I++ +                    +K G+              C  LV W+W
Sbjct: 555 IASGRKAIDQIE--------------------QKSGI--------------C--LVEWIW 578

Query: 138 DLYGERKLLSAANERLDSRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTMP 197
           DLYG  K+    ++RL   FDE+++  L+IVGLWCAHPD   RPSIRQAIQVLNFE  +P
Sbjct: 579 DLYGCGKIHCGIDKRLQINFDEKEVERLVIVGLWCAHPDSSARPSIRQAIQVLNFEAEIP 638

Query: 198 NLPSKMHVPSYHVPTPSVSYGEPFITNSSFEVGR 231
           +LP+KM VP+++ P+PSV  GEP ITNSS  VGR
Sbjct: 639 DLPAKMPVPAFYAPSPSVYSGEPSITNSSIAVGR 672

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255572599|ref|XP_002527233.1| kinase, putative [Ricinus communis] gi|223533409|gb|EEF35159.1| kinase, putative [Ricinus communis]

 Score =  217 bits (553), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 112/214 (52%), Positives = 133/214 (62%), Gaps = 36/214 (16%)

Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALE 77
           D N +AKLGDFGLARLMDHELGP+T  L GTL Y+A EYIST R SKE DV+SF VVALE
Sbjct: 475 DSNCSAKLGDFGLARLMDHELGPQTTGLAGTLGYLAPEYISTRRASKESDVYSFGVVALE 534

Query: 78  IATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVW 137
           I +GR+ I+    +   +                                    LV W+W
Sbjct: 535 IVSGRRAIDHINDKNEMS------------------------------------LVEWIW 558

Query: 138 DLYGERKLLSAANERLDSRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTMP 197
           +LYG+ KL  A +  +   FDE++  CL+IVGLWCAHPDR  RPS+ QAIQVL FET +P
Sbjct: 559 ELYGQGKLHLAVDRAIHMEFDEKEAECLMIVGLWCAHPDRNIRPSMSQAIQVLKFETALP 618

Query: 198 NLPSKMHVPSYHVPTPSVSYGEPFITNSSFEVGR 231
           NLP+KM VP YHVP PS S  EP ITNSS +VGR
Sbjct: 619 NLPAKMPVPMYHVPLPSASSSEPSITNSSLDVGR 652

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255572603|ref|XP_002527235.1| kinase, putative [Ricinus communis] gi|223533411|gb|EEF35161.1| kinase, putative [Ricinus communis]

 Score =  210 bits (534), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 111/214 (51%), Positives = 132/214 (61%), Gaps = 36/214 (16%)

Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALE 77
           D NFNAKLGDFGLARL DHELGP+T  L GTL Y+A EYI+T R SKE DV+SF +VALE
Sbjct: 455 DSNFNAKLGDFGLARLTDHELGPQTTGLAGTLGYLAPEYITTRRASKESDVYSFGMVALE 514

Query: 78  IATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVW 137
           I +GR+VI+    +                                    Y   LV W+W
Sbjct: 515 IISGRRVIDHINDK------------------------------------YEMSLVEWIW 538

Query: 138 DLYGERKLLSAANERLDSRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTMP 197
           +LYGE  L  A ++ L S+F+E++   L+IVGLWCAHPD   RPSIRQAIQVL FE  +P
Sbjct: 539 ELYGEGNLHLAVDKELYSKFNEKEAERLMIVGLWCAHPDCNLRPSIRQAIQVLKFEIALP 598

Query: 198 NLPSKMHVPSYHVPTPSVSYGEPFITNSSFEVGR 231
           NLP+KM VP YHVP  SVS  EP IT SS + GR
Sbjct: 599 NLPAKMLVPVYHVPPASVSSSEPSITYSSLDAGR 632

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449460702|ref|XP_004148084.1| PREDICTED: L-type lectin-domain containing receptor kinase IX.1-like, partial [Cucumis sativus]

 Score =  209 bits (532), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 112/214 (52%), Positives = 136/214 (63%), Gaps = 37/214 (17%)

Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALE 77
           D NFN KLGDFGLARLMDHELG +T  LVGTL Y+A EYI+TGR SKE DVFSF VVALE
Sbjct: 473 DSNFNVKLGDFGLARLMDHELGAQTTGLVGTLGYLAPEYINTGRASKESDVFSFGVVALE 532

Query: 78  IATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVW 137
           IATGR  ++R   +K                      E  K             LV WVW
Sbjct: 533 IATGR--VSRTSMEK----------------------ESHKG------------LVEWVW 556

Query: 138 DLYGERKLLSAANERLDSRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTMP 197
           DLYG  +LL   + +L S FD++Q+ CL++VGLW A+PD  FRPSI+Q IQVLNFE  +P
Sbjct: 557 DLYGSGQLLEGVDAKLQSNFDKKQVECLMVVGLWSAYPDPNFRPSIKQVIQVLNFEAAVP 616

Query: 198 NLPSKMHVPSYHVPTPSVSYGEPFITNSSFEVGR 231
           NLP+KM VP+Y+ P+ S+S  EP  T  S ++GR
Sbjct: 617 NLPNKMPVPTYNAPSTSMSSNEPSFT-VSLDMGR 649

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449484066|ref|XP_004156774.1| PREDICTED: LOW QUALITY PROTEIN: L-type lectin-domain containing receptor kinase IX.1-like [Cucumis sativus]

 Score =  209 bits (532), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 112/214 (52%), Positives = 136/214 (63%), Gaps = 37/214 (17%)

Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALE 77
           D NFN KLGDFGLARLMDHELG +T  LVGTL Y+A EYI+TGR SKE DVFSF VVALE
Sbjct: 475 DSNFNVKLGDFGLARLMDHELGAQTTGLVGTLGYLAPEYINTGRASKESDVFSFGVVALE 534

Query: 78  IATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVW 137
           IATGR  ++R   +K                      E  K             LV WVW
Sbjct: 535 IATGR--VSRTSMEK----------------------ESHKG------------LVEWVW 558

Query: 138 DLYGERKLLSAANERLDSRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTMP 197
           DLYG  +LL   + +L S FD++Q+ CL++VGLW A+PD  FRPSI+Q IQVLNFE  +P
Sbjct: 559 DLYGSGQLLEGVDAKLQSNFDKKQVECLMVVGLWSAYPDPNFRPSIKQVIQVLNFEAAVP 618

Query: 198 NLPSKMHVPSYHVPTPSVSYGEPFITNSSFEVGR 231
           NLP+KM VP+Y+ P+ S+S  EP  T  S ++GR
Sbjct: 619 NLPNKMPVPTYNAPSTSMSSNEPSFT-VSLDMGR 651

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357517131|ref|XP_003628854.1| Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|355522876|gb|AET03330.1| Cysteine-rich receptor-like protein kinase [Medicago truncatula]

 Score =  209 bits (532), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 108/208 (51%), Positives = 129/208 (62%), Gaps = 35/208 (16%)

Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALE 77
           D +FN KLGDFGLA+LMDHELGP+T  L GT  Y+A EY+STGR SKE DV+SF +V LE
Sbjct: 478 DSSFNVKLGDFGLAKLMDHELGPQTTGLAGTFGYLAPEYVSTGRASKESDVYSFGIVVLE 537

Query: 78  IATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVW 137
           I +G+K     K +                       + EK             ++ WVW
Sbjct: 538 ITSGKKATEVMKEK-----------------------DEEKG------------MIEWVW 562

Query: 138 DLYGERKLLSAANERLDSRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTMP 197
           D YG+ +LL A +E L   FDE+Q+ CL+IVGLWCAHPD   RPSIRQAIQVLNFE +MP
Sbjct: 563 DHYGKGELLVAMDENLRKDFDEKQVECLMIVGLWCAHPDVSLRPSIRQAIQVLNFEVSMP 622

Query: 198 NLPSKMHVPSYHVPTPSVSYGEPFITNS 225
           NLP K  V +YH PTPSVS  E  ITNS
Sbjct: 623 NLPPKRPVATYHAPTPSVSSVEASITNS 650

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357517145|ref|XP_003628861.1| Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|355522883|gb|AET03337.1| Cysteine-rich receptor-like protein kinase [Medicago truncatula]

 Score =  209 bits (531), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 108/208 (51%), Positives = 129/208 (62%), Gaps = 35/208 (16%)

Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALE 77
           D +FN KLGDFGLA+LMDHELGP+T  L GT  Y+A EY+STGR SKE DV+SF +V LE
Sbjct: 474 DSSFNVKLGDFGLAKLMDHELGPQTTGLAGTFGYLAPEYVSTGRASKESDVYSFGIVVLE 533

Query: 78  IATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVW 137
           I +G+K     K +                       + EK             ++ WVW
Sbjct: 534 ITSGKKATEVMKEK-----------------------DEEKG------------MIEWVW 558

Query: 138 DLYGERKLLSAANERLDSRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTMP 197
           D YG+ +LL A +E L   FDE+Q+ CL+IVGLWCAHPD   RPSIRQAIQVLNFE +MP
Sbjct: 559 DHYGKGELLVAMDENLRKDFDEKQVECLMIVGLWCAHPDVSLRPSIRQAIQVLNFEVSMP 618

Query: 198 NLPSKMHVPSYHVPTPSVSYGEPFITNS 225
           NLP K  V +YH PTPSVS  E  ITNS
Sbjct: 619 NLPPKRPVATYHAPTPSVSSVEASITNS 646

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449531003|ref|XP_004172477.1| PREDICTED: LOW QUALITY PROTEIN: L-type lectin-domain containing receptor kinase IX.1-like [Cucumis sativus]

 Score =  204 bits (520), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 111/214 (51%), Positives = 132/214 (61%), Gaps = 37/214 (17%)

Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALE 77
           D NFN KLGDFGLARLMDHELG +T  LVGTL Y+A EYISTGR SKE DVFSF VVALE
Sbjct: 483 DSNFNVKLGDFGLARLMDHELGAQTTGLVGTLGYLAPEYISTGRASKESDVFSFGVVALE 542

Query: 78  IATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVW 137
           IATGR                          + +  +E E              LV WVW
Sbjct: 543 IATGR--------------------------MSRTSMEAESH----------KGLVEWVW 566

Query: 138 DLYGERKLLSAANERLDSRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTMP 197
           +LYG  +L+   +E++ S FD +Q+ CL++VGLW A+PD   RPSI+Q IQVLNFETTMP
Sbjct: 567 NLYGSAQLIDGMDEKMQSDFDXKQVECLMLVGLWSAYPDPNLRPSIKQVIQVLNFETTMP 626

Query: 198 NLPSKMHVPSYHVPTPSVSYGEPFITNSSFEVGR 231
           NLP+KM VP Y  P  S+S  E  IT  S ++GR
Sbjct: 627 NLPNKMPVPIYSAPPTSMSSNEASIT-VSLDMGR 659

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	231
TAIR|locus:2155685	675	AT5G65600 [Arabidopsis thalian	0.432	0.148	0.457	1.8e-40
TAIR|locus:2083986	715	AT3G53380 [Arabidopsis thalian	0.303	0.097	0.5	3.6e-32
TAIR|locus:2162212	681	AT5G55830 [Arabidopsis thalian	0.324	0.110	0.473	2.4e-30
TAIR|locus:2143528	711	AT5G03140 [Arabidopsis thalian	0.303	0.098	0.514	5e-29
TAIR|locus:2133239	669	AT4G02420 [Arabidopsis thalian	0.294	0.101	0.5	5.5e-23
TAIR|locus:2142499	651	AT5G10530 [Arabidopsis thalian	0.519	0.184	0.512	5.7e-23
TAIR|locus:2133229	674	LPK1 "lectin-like protein kina	0.294	0.100	0.5	2.3e-22
TAIR|locus:2040681	675	RLK "receptor lectin kinase" [	0.294	0.100	0.514	2.4e-22
TAIR|locus:2084375	677	AT3G53810 [Arabidopsis thalian	0.316	0.107	0.479	2.9e-22
TAIR|locus:2020608	666	AT1G70110 [Arabidopsis thalian	0.294	0.102	0.558	7.1e-22

TAIR|locus:2155685 AT5G65600 [Arabidopsis thaliana (taxid:3702)]

 Score = 246 (91.7 bits), Expect = 1.8e-40, Sum P(2) = 1.8e-40
 Identities = 49/107 (45%), Positives = 72/107 (67%)

Query:   132 LVAWVWDLYGERKLL-SAANERLDSRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVL 190
             LV  VW+LYG+++L+ S  +++L   FD+++  CLL++GLWCAHPD+  RPSI+Q IQV+
Sbjct:   569 LVEKVWELYGKQELITSCVDDKLGEDFDKKEAECLLVLGLWCAHPDKNSRPSIKQGIQVM 628

Query:   191 NFETTMPNLPSKMHVPSYHVPT------PSVSYGEPFITNSSFEVGR 231
             NFE+ +P+LP K  V  Y++ T      PSV+     +T S  E GR
Sbjct:   629 NFESPLPDLPLKRPVAMYYISTTTSSSSPSVNSNGVSVTFSGIEYGR 675

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009723 "response to ethylene stimulus" evidence=RCA

TAIR|locus:2083986 AT3G53380 [Arabidopsis thaliana (taxid:3702)]

 Score = 195 (73.7 bits), Expect = 3.6e-32, Sum P(2) = 3.6e-32
 Identities = 35/70 (50%), Positives = 51/70 (72%)

Query:    18 DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALE 77
             D +FNAKLGDFGLAR ++H+  P+  +  GT+ Y+A EY+ TGR S++ DVFS+  V LE
Sbjct:   509 DESFNAKLGDFGLARQIEHDKSPEATVAAGTMGYLAPEYLLTGRASEKTDVFSYGAVVLE 568

Query:    78 IATGRKVINR 87
             + +GR+ I +
Sbjct:   569 VVSGRRPIEK 578

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=ISS

TAIR|locus:2162212 AT5G55830 [Arabidopsis thaliana (taxid:3702)]

 Score = 192 (72.6 bits), Expect = 2.4e-30, Sum P(2) = 2.4e-30
 Identities = 36/76 (47%), Positives = 54/76 (71%)

Query:    18 DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALE 77
             D NFNA+LGDFGLARL +H+  P + +  GT+ Y+A EY+  G  +++ D FS+ VV LE
Sbjct:   502 DINFNARLGDFGLARLTEHDKSPVSTLTAGTMGYLAPEYLQYGTATEKTDAFSYGVVILE 561

Query:    78 IATGRKVINRY-KAQK 92
             +A GR+ I++  ++QK
Sbjct:   562 VACGRRPIDKEPESQK 577

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0000226 "microtubule cytoskeleton organization" evidence=RCA

GO:0000911 "cytokinesis by cell plate formation" evidence=RCA

TAIR|locus:2143528 AT5G03140 [Arabidopsis thaliana (taxid:3702)]

 Score = 194 (73.4 bits), Expect = 5.0e-29, Sum P(2) = 5.0e-29
 Identities = 36/70 (51%), Positives = 47/70 (67%)

Query:    18 DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALE 77
             D NFN KLGDFGLAR  +H+  P      GT+ Y+A EY+ TGR +++ DVFS+  V LE
Sbjct:   506 DANFNPKLGDFGLARQTEHDKSPDATAAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLE 565

Query:    78 IATGRKVINR 87
             + TGR+ I R
Sbjct:   566 VCTGRRPITR 575

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=ISS

TAIR|locus:2133239 AT4G02420 [Arabidopsis thaliana (taxid:3702)]

 Score = 174 (66.3 bits), Expect = 5.5e-23, Sum P(2) = 5.5e-23
 Identities = 34/68 (50%), Positives = 46/68 (67%)

Query:    18 DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALE 77
             D   N +LGDFGLA+L DH   P+T  +VGT  Y+A ++I TGR +   DVF+F V+ LE
Sbjct:   484 DAELNGRLGDFGLAQLCDHGSDPQTTRVVGTWGYLAPDHIRTGRATTTTDVFAFGVLLLE 543

Query:    78 IATGRKVI 85
             +A GR+ I
Sbjct:   544 VACGRRPI 551

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2142499 AT5G10530 [Arabidopsis thaliana (taxid:3702)]

 Score = 274 (101.5 bits), Expect = 5.7e-23, P = 5.7e-23
 Identities = 62/121 (51%), Positives = 74/121 (61%)

Query:    18 DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALE 77
             D NFNAKLGDFGLARLMDHELGP+T  L GT  YMA EYISTGR SKE DV+SF VV LE
Sbjct:   468 DSNFNAKLGDFGLARLMDHELGPQTTGLAGTFGYMAPEYISTGRASKESDVYSFGVVTLE 527

Query:    78 IATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKL-VAWV 136
             I TGRK ++R + +      +V       G  E +    EK  +GG  +     L +  +
Sbjct:   528 IVTGRKSVDRRQGRVEPVTNLVEKMWDLYGKGEVITAIDEKLRIGGFDEKQAECLMIVGL 587

Query:   137 W 137
             W
Sbjct:   588 W 588

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2133229 LPK1 "lectin-like protein kinase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 180 (68.4 bits), Expect = 2.3e-22, Sum P(2) = 2.3e-22
 Identities = 34/68 (50%), Positives = 47/68 (69%)

Query:    18 DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALE 77
             D  +N +LGDFGLARL DH   P+T  +VGT  Y+A +++ TGR +   DVF+F V+ LE
Sbjct:   489 DAEYNGRLGDFGLARLCDHGSDPQTTRVVGTWGYLAPDHVRTGRATTATDVFAFGVLLLE 548

Query:    78 IATGRKVI 85
             +A GR+ I
Sbjct:   549 VACGRRPI 556

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009625 "response to insect" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

TAIR|locus:2040681 RLK "receptor lectin kinase" [Arabidopsis thaliana (taxid:3702)]

 Score = 174 (66.3 bits), Expect = 2.4e-22, Sum P(2) = 2.4e-22
 Identities = 35/68 (51%), Positives = 44/68 (64%)

Query:    18 DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALE 77
             D   N +LGDFGLARL DH   P+T  +VGTL Y+A E+  TGR +   DVF+F    LE
Sbjct:   481 DGELNGRLGDFGLARLYDHGSDPQTTHVVGTLGYLAPEHTRTGRATMATDVFAFGAFLLE 540

Query:    78 IATGRKVI 85
             +A GR+ I
Sbjct:   541 VACGRRPI 548

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009751 "response to salicylic acid stimulus" evidence=IEP

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006995 "cellular response to nitrogen starvation" evidence=RCA

GO:0009617 "response to bacterium" evidence=RCA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0031347 "regulation of defense response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0035304 "regulation of protein dephosphorylation" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0045088 "regulation of innate immune response" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2084375 AT3G53810 [Arabidopsis thaliana (taxid:3702)]

 Score = 179 (68.1 bits), Expect = 2.9e-22, Sum P(2) = 2.9e-22
 Identities = 35/73 (47%), Positives = 48/73 (65%)

Query:    18 DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALE 77
             D +FN +LGDFGLARL DH   P+T  +VGTL Y+A E+  TGR +   DV++F    LE
Sbjct:   481 DADFNGRLGDFGLARLYDHGSDPQTTHVVGTLGYLAPEHSRTGRATTTTDVYAFGAFLLE 540

Query:    78 IATGRKVINRYKA 90
             + +GR+ I  + A
Sbjct:   541 VVSGRRPIEFHSA 553

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009555 "pollen development" evidence=IMP

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

TAIR|locus:2020608 AT1G70110 [Arabidopsis thaliana (taxid:3702)]

 Score = 185 (70.2 bits), Expect = 7.1e-22, Sum P(2) = 7.1e-22
 Identities = 38/68 (55%), Positives = 46/68 (67%)

Query:    18 DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALE 77
             D N NAKLGDFGLA+L DH   P+T  + GTL Y++ E   TG+ S   DVF+F +V LE
Sbjct:   478 DANMNAKLGDFGLAKLCDHGTDPQTSHVAGTLGYISPELSRTGKASTRSDVFAFGIVMLE 537

Query:    78 IATGRKVI 85
             IA GRK I
Sbjct:   538 IACGRKPI 545

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.7.11	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh4_pg.C_LG_III000739 hypothetical protein (651 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	231
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	5e-10
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	7e-10
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	2e-09
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	1e-08
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	3e-06
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	5e-06
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	5e-06
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	1e-05
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	4e-05
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	6e-05
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	1e-04
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	1e-04
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	2e-04
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	2e-04
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	2e-04
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	2e-04
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	4e-04
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	6e-04
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	0.001
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	0.002
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	0.002
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	0.002
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	0.002
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	0.002
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	0.002
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	0.003
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	0.003
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	0.003
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	0.003
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	0.003
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	0.003
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	0.003
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	0.004

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 57.5 bits (140), Expect = 5e-10
 Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALE 77
           D + + KL DFGLAR +D   G K    VGT  YMA E +      K +D++S  V+  E
Sbjct: 131 DEDGHVKLADFGLARQLDP--GEKLTTFVGTPEYMAPEVLLGKGYGKAVDIWSLGVILYE 188

Query: 78  IATGR 82
           + TG+
Sbjct: 189 LLTGK 193

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 57.2 bits (139), Expect = 7e-10
 Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 1/73 (1%)

Query: 18  DFNFNAKLGDFGLARLM-DHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVAL 76
           D +   KL DFG A+ + D E G  T  + GT  +MA E I      +  D++S     +
Sbjct: 135 DSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVI 194

Query: 77  EIATGRKVINRYK 89
           E+ATG+   +   
Sbjct: 195 EMATGKPPWSELG 207

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 55.7 bits (135), Expect = 2e-09
 Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 2/69 (2%)

Query: 20  NFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYI-STGRVSKELDVFSFRVVALEI 78
           N   KL DFGL++L+  +      + VGT AYMA E +   G  S++ D++S  V+  E+
Sbjct: 129 NGKVKLADFGLSKLLTSDKSLLKTI-VGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL 187

Query: 79  ATGRKVINR 87
              + +I +
Sbjct: 188 PELKDLIRK 196

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 53.4 bits (129), Expect = 1e-08
 Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 2/66 (3%)

Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGR-VSKELDVFSFRVVAL 76
           D N   K+ DFGLA+ +       T   VGT  YMA E +  G     ++DV+S  V+  
Sbjct: 132 DENGVVKIADFGLAKKLLKSSSSLT-TFVGTPWYMAPEVLLGGNGYGPKVDVWSLGVILY 190

Query: 77  EIATGR 82
           E+ TG+
Sbjct: 191 ELLTGK 196

Length = 260

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 46.5 bits (111), Expect = 3e-06
 Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 3/66 (4%)

Query: 18  DFNFNAKLGDFGLARLMDHELGP-KTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVAL 76
           D N N KLGDFGLA+++ H+    KT   VGT  YM+ E ++     ++ D++S   +  
Sbjct: 144 DANNNVKLGDFGLAKILGHDSSFAKT--YVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIY 201

Query: 77  EIATGR 82
           E+    
Sbjct: 202 ELCALS 207

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 46.3 bits (108), Expect = 5e-06
 Identities = 33/150 (22%), Positives = 51/150 (34%), Gaps = 20/150 (13%)

Query: 20  NFNAKLGDFGLARLMDHELGPKTI-----MLVGTLAYMASEYI---STGRVSKELDVFSF 71
               KL DFGLA+L+       +I       VGT  YMA E +   S    S   D++S 
Sbjct: 138 GRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSL 197

Query: 72  RVVALEIATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPK 131
            +   E+ TG       K     +Q            ++ +      ++    S +    
Sbjct: 198 GITLYELLTGLPPFEGEKNSSATSQT-----------LKIILELPTPSLASPLSPSNPEL 246

Query: 132 LVAWVWDLYGERKLLSAANERLDSRFDEQQ 161
           +     DL  ++ L      RL S  D   
Sbjct: 247 ISKAASDLL-KKLLAKDPKNRLSSSSDLSH 275

Length = 384

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 45.7 bits (109), Expect = 5e-06
 Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)

Query: 24  KLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGR 82
           KL DFGL+  +          +VGT  +MA E I+      + D++S  + A+E+A G+
Sbjct: 138 KLIDFGLSAQL--SDTKARNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGK 194

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 44.6 bits (106), Expect = 1e-05
 Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 6/72 (8%)

Query: 18  DFNFNAKLGDFGLA-RLMDHELGPKTIM--LVGTLAYMASEYISTGRVSKEL---DVFSF 71
           D N   KLGDFG A +L ++       +  L GT AYMA E I+ G+        D++S 
Sbjct: 133 DHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSL 192

Query: 72  RVVALEIATGRK 83
             V LE+ATG++
Sbjct: 193 GCVVLEMATGKR 204

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 43.1 bits (102), Expect = 4e-05
 Identities = 20/76 (26%), Positives = 31/76 (40%), Gaps = 3/76 (3%)

Query: 23  AKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGR 82
             + DF +A  +       T    GT  YMA E +     S  +D +S  V A E   G+
Sbjct: 139 VHITDFNIATKV--TPDTLTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGK 196

Query: 83  KVINRYKAQKLRTQFV 98
           +   R  ++ +R Q  
Sbjct: 197 RPY-RGHSRTIRDQIR 211

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 42.5 bits (101), Expect = 6e-05
 Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 5/66 (7%)

Query: 20  NFNAKLGDFGLARLMDH--ELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALE 77
           N   KLGDFG+++++    +L  KT+  VGT  Y++ E       + + D++S   V  E
Sbjct: 139 NGLVKLGDFGISKVLSSTVDLA-KTV--VGTPYYLSPELCQNKPYNYKSDIWSLGCVLYE 195

Query: 78  IATGRK 83
           + T + 
Sbjct: 196 LCTLKH 201

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 41.4 bits (98), Expect = 1e-04
 Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 5/64 (7%)

Query: 20  NFNAKLGDFGLARLMDHELGPKTIMLVGT---LAYMASEYISTGRVSKELDVFSFRVVAL 76
           +   K+ DFGL+R  D           G    + +MA E +  G  + + DV+SF V+  
Sbjct: 141 DLVVKISDFGLSR--DVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLW 198

Query: 77  EIAT 80
           EI T
Sbjct: 199 EIFT 202

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 41.4 bits (98), Expect = 1e-04
 Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 2/62 (3%)

Query: 20  NFNAKLGDFGLAR-LMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEI 78
           N   K+ DFGL+R L D +   K    +  + +MA E +  G+ + + DV+SF V+  EI
Sbjct: 138 NLVVKISDFGLSRDLYDDDYYRKRGGKL-PIRWMAPESLKEGKFTSKSDVWSFGVLLWEI 196

Query: 79  AT 80
            T
Sbjct: 197 FT 198

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 41.0 bits (97), Expect = 2e-04
 Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 1/61 (1%)

Query: 22  NAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATG 81
           + KL DFGLA+ +  E G +T    GT  Y+A E +      K +D +S  V+  E+ TG
Sbjct: 131 HIKLTDFGLAKELSSE-GSRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTG 189

Query: 82  R 82
           +
Sbjct: 190 K 190

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 41.2 bits (97), Expect = 2e-04
 Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 7/65 (10%)

Query: 20  NFNAKLGDFGLARLM-DHEL---GPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVA 75
           +   K+GDFG+ R + + +    G K ++ V    +MA E +  G  + + DV+SF VV 
Sbjct: 155 DLTVKIGDFGMTRDIYETDYYRKGGKGLLPV---RWMAPESLKDGVFTTKSDVWSFGVVL 211

Query: 76  LEIAT 80
            E+AT
Sbjct: 212 WEMAT 216

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 41.1 bits (97), Expect = 2e-04
 Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 1/61 (1%)

Query: 22  NAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATG 81
            AKL DFG++  +   +  K   ++GT  +MA E I     + + D++S  + A+E+A G
Sbjct: 137 QAKLADFGVSGQLTDTMA-KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEG 195

Query: 82  R 82
           +
Sbjct: 196 K 196

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 40.7 bits (96), Expect = 2e-04
 Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 1/61 (1%)

Query: 22  NAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATG 81
             K+ DFG+++++++ L       VGT+ YM+ E I     S   D++S  +  LE A G
Sbjct: 138 EVKIADFGISKVLENTLDQCN-TFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALG 196

Query: 82  R 82
           +
Sbjct: 197 K 197

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 39.8 bits (94), Expect = 4e-04
 Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 6/64 (9%)

Query: 20  NFNAKLGDFGLARLMDHELGPKTIMLVGT---LAYMASEYISTGRVSKELDVFSFRVVAL 76
           N   K+ DFGL+R +  +       + G    + +MA E +  G+ + + DV+SF V+  
Sbjct: 139 NLVVKISDFGLSRDLYDD---DYYKVKGGKLPIRWMAPESLKEGKFTSKSDVWSFGVLLW 195

Query: 77  EIAT 80
           EI T
Sbjct: 196 EIFT 199

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 39.6 bits (93), Expect = 6e-04
 Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 3/59 (5%)

Query: 24  KLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGR 82
           KL DFG++  + + L  KT   VGT +YMA E I     S + D++S  +  +E+ATGR
Sbjct: 141 KLCDFGVSGQLVNSLA-KT--FVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGR 196

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 39.0 bits (92), Expect = 0.001
 Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 5/65 (7%)

Query: 20  NFNAKLGDFGLARLMDHELGPKTIMLVGTL---AYMASEYISTGRVSKELDVFSFRVVAL 76
           N   K+ DFGL+R  D           G      +MA E +  G+ + + DV+SF V+  
Sbjct: 138 NLVVKISDFGLSR--DIYEDDYYRKRGGGKLPIKWMAPESLKDGKFTSKSDVWSFGVLLW 195

Query: 77  EIATG 81
           EI T 
Sbjct: 196 EIFTL 200

Length = 258

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 38.2 bits (89), Expect = 0.002
 Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 2/61 (3%)

Query: 22  NAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRV-SKELDVFSFRVVALEIAT 80
           N KL DFG+A L++     K    VGT  +MA E I+ G+    + D++S  +   E+AT
Sbjct: 139 NVKLCDFGVAALLNQNSS-KRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMAT 197

Query: 81  G 81
           G
Sbjct: 198 G 198

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 38.0 bits (89), Expect = 0.002
 Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%)

Query: 24  KLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATG 81
           KL DFG A  +  E   +  + VGT  +MA E I       ++D++S  ++ +E+A G
Sbjct: 156 KLADFGFAAQLTKEKSKRNSV-VGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEG 212

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 38.1 bits (88), Expect = 0.002
 Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 1/58 (1%)

Query: 24  KLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATG 81
           KL DFG    +  E+ P+   LVGT  +MA E IS      E+D++S  ++ +E+  G
Sbjct: 156 KLSDFGFCAQVSKEV-PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 212

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 37.9 bits (88), Expect = 0.002
 Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 3/59 (5%)

Query: 24  KLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGR 82
           KL DFG++  + + +  KT   VGT AYMA E IS  +     DV+S  +  +E+A GR
Sbjct: 135 KLCDFGVSTQLVNSIA-KT--YVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGR 190

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 37.8 bits (88), Expect = 0.002
 Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 1/60 (1%)

Query: 22  NAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATG 81
             KL DFG    +  E+ P+   LVGT  +MA E IS      E+D++S  ++ +E+  G
Sbjct: 153 RVKLSDFGFCAQVSKEV-PRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDG 211

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 37.8 bits (88), Expect = 0.002
 Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 2/66 (3%)

Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRV--SKELDVFSFRVVA 75
           D   +  L DFGL++    E   +     GT+ YMA E I  G     K +D +S  V+ 
Sbjct: 139 DSEGHVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLT 198

Query: 76  LEIATG 81
            E+ TG
Sbjct: 199 FELLTG 204

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 37.9 bits (88), Expect = 0.003
 Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 3/59 (5%)

Query: 24  KLGDFGLAR-LMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATG 81
           KL DFGL++  +DHE   K     GT+ YMA E ++    ++  D +SF V+  E+ TG
Sbjct: 138 KLTDFGLSKESIDHE--KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 194

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 37.5 bits (87), Expect = 0.003
 Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 3/62 (4%)

Query: 22  NAKLGDFGLARLM-DHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT 80
           N K+GD G+A+L+ D+     TI  VGT  Y++ E       +++ DV++  VV  E  T
Sbjct: 139 NVKIGDLGVAKLLSDNTNFANTI--VGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCT 196

Query: 81  GR 82
           G+
Sbjct: 197 GK 198

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 37.7 bits (87), Expect = 0.003
 Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 5/80 (6%)

Query: 22  NAKLGDFGLA-RLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT 80
           + KL DFG+A +L D ++   T   VGT  +MA E I       + D++S  + A+E+A 
Sbjct: 139 DVKLADFGVAGQLTDTQIKRNT--FVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAK 196

Query: 81  GRKVINRYKAQKLRTQFVVP 100
           G           +R  F++P
Sbjct: 197 GEP--PNSDMHPMRVLFLIP 214

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 37.7 bits (87), Expect = 0.003
 Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 1/58 (1%)

Query: 24  KLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATG 81
           KL DFG    +  E+ PK   LVGT  +MA E IS      E+D++S  ++ +E+  G
Sbjct: 158 KLSDFGFCAQVSKEV-PKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDG 214

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 37.5 bits (87), Expect = 0.003
 Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 3/61 (4%)

Query: 24  KLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGR--VSKELDVFSFRVVALEIATG 81
           K+ DFG ++ +   + P T    GTL YMA E I  G        D++S     +E+ATG
Sbjct: 149 KISDFGTSKRL-AGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATG 207

Query: 82  R 82
           +
Sbjct: 208 K 208

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 37.3 bits (87), Expect = 0.003
 Identities = 27/76 (35%), Positives = 37/76 (48%), Gaps = 10/76 (13%)

Query: 24  KLGDFG----LARLMDHELGP-KTIMLVGTLAYMASEYIS--TGRVSKELDVFSFRVVAL 76
           K+ DFG    LA   D      KT   VGT  +MA E +    G   K  D++SF + A+
Sbjct: 142 KIADFGVSASLADGGDRTRKVRKTF--VGTPCWMAPEVMEQVHGYDFKA-DIWSFGITAI 198

Query: 77  EIATGRKVINRYKAQK 92
           E+ATG    ++Y   K
Sbjct: 199 ELATGAAPYSKYPPMK 214

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 37.3 bits (86), Expect = 0.003
 Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 1/58 (1%)

Query: 24  KLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATG 81
           KL DFG    +  ++ PK   LVGT  +MA E IS      E+D++S  ++ +E+  G
Sbjct: 157 KLSDFGFCAQISKDV-PKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDG 213

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 37.1 bits (86), Expect = 0.004
 Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 6/66 (9%)

Query: 22  NAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIST----GRVSKEL-DVFSFRVVAL 76
           N K+ DFG++R++   + P     VGT+AYM+ E I+T    G       D++S  V  L
Sbjct: 206 NVKIADFGVSRILAQTMDPCNSS-VGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSIL 264

Query: 77  EIATGR 82
           E   GR
Sbjct: 265 EFYLGR 270

Length = 353

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	231
KOG0581	364	consensus Mitogen-activated protein kinase kinase	99.96
KOG1187	361	consensus Serine/threonine protein kinase [Signal	99.95
KOG0192	362	consensus Tyrosine kinase specific for activated (	99.94
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	99.94
KOG0661	538	consensus MAPK related serine/threonine protein ki	99.93
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.93
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	99.93
KOG0578	550	consensus p21-activated serine/threonine protein k	99.93
KOG0201	467	consensus Serine/threonine protein kinase [Signal	99.93
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	99.93
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	99.92
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	99.92
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	99.92
KOG4721	904	consensus Serine/threonine protein kinase, contain	99.92
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	99.92
KOG0582	516	consensus Ste20-like serine/threonine protein kina	99.92
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	99.91
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	99.91
KOG0198	313	consensus MEKK and related serine/threonine protei	99.91
KOG0575	592	consensus Polo-like serine/threonine protein kinas	99.91
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	99.91
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	99.91
KOG0583	370	consensus Serine/threonine protein kinase [Signal	99.9
PTZ00284	467	protein kinase; Provisional	99.9
PHA02988	283	hypothetical protein; Provisional	99.89
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.89
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.89
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	99.89
KOG0605	550	consensus NDR and related serine/threonine kinases	99.89
PHA03212	391	serine/threonine kinase US3; Provisional	99.89
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	99.89
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	99.89
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.89
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.88
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	99.88
KOG0598	357	consensus Ribosomal protein S6 kinase and related	99.88
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.88
PTZ00036	440	glycogen synthase kinase; Provisional	99.88
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.88
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.88
KOG0596	677	consensus Dual specificity; serine/threonine and t	99.88
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.88
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.88
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.88
PTZ00283	496	serine/threonine protein kinase; Provisional	99.88
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	99.88
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.88
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.87
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.87
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.87
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.87
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.87
KOG0694	694	consensus Serine/threonine protein kinase [Signal	99.87
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.87
PHA03209	357	serine/threonine kinase US3; Provisional	99.87
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.87
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	99.87
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.87
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	99.87
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.87
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.86
KOG0595	429	consensus Serine/threonine-protein kinase involved	99.86
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.86
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.86
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.86
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.86
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.86
PHA03207	392	serine/threonine kinase US3; Provisional	99.86
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.86
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.86
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.86
PTZ00267	478	NIMA-related protein kinase; Provisional	99.86
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.86
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.86
PHA03211	461	serine/threonine kinase US3; Provisional	99.86
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	99.86
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.86
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.86
PHA03210	501	serine/threonine kinase US3; Provisional	99.86
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.86
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.86
PHA02882	294	putative serine/threonine kinase; Provisional	99.86
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.86
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.86
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.86
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.86
KOG0589	426	consensus Serine/threonine protein kinase [General	99.86
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.86
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.86
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.85
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.85
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.85
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.85
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	99.85
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.85
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.85
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.85
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.85
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.85
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.85
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.85
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.85
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.85
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.85
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.85
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.85
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	99.85
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	99.85
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.85
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.85
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.85
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.85
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.85
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.85
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.85
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.85
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.85
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.85
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.85
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.84
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.84
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.84
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.84
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.84
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.84
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.84
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.84
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	99.84
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.84
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.84
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.84
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.84
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.84
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.84
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.84
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.84
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.84
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.84
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.84
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.84
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.84
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.84
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.84
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.84
KOG0577	948	consensus Serine/threonine protein kinase [Signal	99.84
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.84
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.83
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.83
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.83
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.83
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.83
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.83
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.83
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.83
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.83
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.83
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.83
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.83
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	99.83
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	99.83
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.83
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.83
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.83
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.83
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.83
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.83
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.83
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.83
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.83
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.83
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.83
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.83
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.83
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.83
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.83
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.83
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.83
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.83
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.83
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	99.83
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.83
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.83
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.83
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.83
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.83
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.83
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.83
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.83
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.82
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.82
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.82
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.82
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.82
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.82
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.82
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	99.82
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.82
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.82
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.82
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	99.82
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.82
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.82
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.82
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.82
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.82
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.82
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.82
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.82
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.82
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.82
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.82
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.82
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.82
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.82
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.82
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.82
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.82
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.82
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.82
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.82
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.82
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.82
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.82
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.82
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.82
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.82
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.82
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.81
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.81
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.81
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.81
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.81
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.81
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.81
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.81
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.81
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.81
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.81
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.81
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.81
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.81
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.81
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.81
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.81
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.81
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.81
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	99.81
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.81
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.81
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.81
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.81
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.81
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.81
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.81
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.81
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.81
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.81
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.81
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.81
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.81
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.81
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.81
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.81
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.81
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.81
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.81
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.8
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.8
PLN00181	793	protein SPA1-RELATED; Provisional	99.8
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.8
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.8
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.8
KOG4717	864	consensus Serine/threonine protein kinase [Signal	99.8
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.8
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.8
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.8
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.8
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.8
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.8
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.8
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.8
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.8
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.8
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.8
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.8
KOG0611	668	consensus Predicted serine/threonine protein kinas	99.8
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	99.8
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.8
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.8
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.8
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.8
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.8
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.8
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.8
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.8
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.8
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.8
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.8
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.8
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.8
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.8
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.8
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.8
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.8
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.8
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.8
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.8
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.8
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.8
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.8
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.79
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.79
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.79
KOG1989	738	consensus ARK protein kinase family [Signal transd	99.79
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.79
KOG3653	534	consensus Transforming growth factor beta/activin	99.79
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.79
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.79
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.79
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.79
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.79
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.79
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.79
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.79
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.79
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.79
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.79
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.79
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.79
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.79
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.78
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.78
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.78
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.78
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.78
PLN00009	294	cyclin-dependent kinase A; Provisional	99.78
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.78
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.78
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	99.78
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.78
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.78
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.78
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.78
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.78
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.78
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.78
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.78
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.77
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.77
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.77
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.77
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.77
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.77
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.77
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.77
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.77
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.77
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	99.77
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.77
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.77
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.76
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.76
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.76
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.76
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.76
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.76
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.76
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.75
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.75
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.75
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.75
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.75
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	99.75
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.75
KOG0584	632	consensus Serine/threonine protein kinase [General	99.75
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.75
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.75
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.74
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.74
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.73
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.73
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.73
KOG0610	459	consensus Putative serine/threonine protein kinase	99.72
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.72
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.72
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.72
KOG0690	516	consensus Serine/threonine protein kinase [Signal	99.7
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.7
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.69
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.68
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.67
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.67
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.64
KOG0586	596	consensus Serine/threonine protein kinase [General	99.64
KOG0607	463	consensus MAP kinase-interacting kinase and relate	99.62
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.59
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.56
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.5
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.48
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.48
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.47
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.46
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.45
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.45
KOG1152	772	consensus Signal transduction serine/threonine kin	99.38
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	99.37
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.33
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	99.33
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.29
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.27
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.09
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.08
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	99.02
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	98.99
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	98.95
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	98.85
KOG0590	601	consensus Checkpoint kinase and related serine/thr	98.55
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	98.4
PRK09188	365	serine/threonine protein kinase; Provisional	98.38
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	98.3
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	98.26
PRK12274	218	serine/threonine protein kinase; Provisional	98.19
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	98.15
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	97.79
KOG0606	1205	consensus Microtubule-associated serine/threonine	97.69
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	97.38
KOG2137	700	consensus Protein kinase [Signal transduction mech	97.34
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	97.32
smart00090	237	RIO RIO-like kinase.	97.09
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	96.61
KOG1266	458	consensus Protein kinase [Signal transduction mech	96.61
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	96.6
PRK10345	210	hypothetical protein; Provisional	96.53
PRK14879	211	serine/threonine protein kinase; Provisional	96.43
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	96.36
PRK09605	535	bifunctional UGMP family protein/serine/threonine	96.33
COG4248	637	Uncharacterized protein with protein kinase and he	96.23
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	96.04
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	95.92
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	93.15
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	92.63
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	92.61
KOG1826	2724	consensus Ras GTPase activating protein RasGAP/neu	91.54
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	90.13
KOG3087	229	consensus Serine/threonine protein kinase [General	89.19
PRK10271	188	thiK thiamine kinase; Provisional	88.61
KOG1243	690	consensus Protein kinase [General function predict	87.06
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	86.48
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	85.29
PRK05231	319	homoserine kinase; Provisional	85.22
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	85.13
COG0478	304	RIO-like serine/threonine protein kinase fused to	84.98
KOG0576	829	consensus Mitogen-activated protein kinase kinase	84.65
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	84.58
PF01636	239	APH: Phosphotransferase enzyme family This family	84.32
COG5072	488	ALK1 Serine/threonine kinase of the haspin family	84.19
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	84.06
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	84.05
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	83.33
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	83.25
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	83.02
PLN02236	344	choline kinase	81.09
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	80.81

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=99.96  E-value=2.5e-29  Score=201.50  Aligned_cols=144  Identities=22%  Similarity=0.201  Sum_probs=112.6

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+|+|++.+|.+||+|||++..+-.+   .+.+++||..||+||.+.+..|+.++||||||++++|+..|+.||
T Consensus       201 IHRDIKPsNlLvNskGeVKicDFGVS~~lvnS---~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~  277 (364)
T KOG0581|consen  201 IHRDIKPSNLLVNSKGEVKICDFGVSGILVNS---IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPY  277 (364)
T ss_pred             eeccCCHHHeeeccCCCEEeccccccHHhhhh---hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCC
Confidence            39999999999999999999999999887543   567899999999999999999999999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      ....                                     .......+.+.....+.      .|.+...   .....|
T Consensus       278 ~~~~-------------------------------------~~~~~~~~Ll~~Iv~~p------pP~lP~~---~fS~ef  311 (364)
T KOG0581|consen  278 PPPN-------------------------------------PPYLDIFELLCAIVDEP------PPRLPEG---EFSPEF  311 (364)
T ss_pred             CCcC-------------------------------------CCCCCHHHHHHHHhcCC------CCCCCcc---cCCHHH
Confidence            7531                                     11222222222222111      1222221   366778


Q ss_pred             HHHHHhhcCCCCCCCCCHHHHHHHHhcccCCCC
Q 045790          166 LIVGLWCAHPDRCFRPSIRQAIQVLNFETTMPN  198 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~~~  198 (231)
                      ..|+..||++||.+|||+.|+++|++.......
T Consensus       312 ~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~~~~  344 (364)
T KOG0581|consen  312 RSFVSCCLRKDPSERPSAKQLLQHPFIKKFEDP  344 (364)
T ss_pred             HHHHHHHhcCCcccCCCHHHHhcCHHHhhcccc
Confidence            899999999999999999999999998665443

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=4.3e-28  Score=202.05  Aligned_cols=154  Identities=34%  Similarity=0.494  Sum_probs=128.5

Q ss_pred             eeeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEe-eccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCC
Q 045790            4 VAYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIML-VGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGR   82 (231)
Q Consensus         4 ~~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~-~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~   82 (231)
                      ...|||||++|||+|+++.+||+|||+++..... ....... .|+.+|++||+...+..+.++||||||++++|+++|+
T Consensus       197 ~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~~-~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr  275 (361)
T KOG1187|consen  197 PIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPEG-DTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGR  275 (361)
T ss_pred             CEecCCCCHHHeeECCCCCEEccCccCcccCCcc-ccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCC
Confidence            3579999999999999999999999999765431 1112222 8999999999998888999999999999999999999


Q ss_pred             CccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhccccc-CcccH-H
Q 045790           83 KVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLD-SRFDE-Q  160 (231)
Q Consensus        83 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~-~  160 (231)
                      .+.+...+                                    .....+.+|++..+....+.+++|+.+. ..+.. +
T Consensus       276 ~~~d~~~~------------------------------------~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~  319 (361)
T KOG1187|consen  276 KAVDQSRP------------------------------------RGELSLVEWAKPLLEEGKLREIVDPRLKEGEYPDEK  319 (361)
T ss_pred             cccCCCCC------------------------------------cccccHHHHHHHHHHCcchhheeCCCccCCCCChHH
Confidence            87753221                                    2233489999999998899999999987 55554 7


Q ss_pred             HHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          161 QMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       161 ~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      ++.++..++.+|++.+|.+||+|.||+.+|....
T Consensus       320 ~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~  353 (361)
T KOG1187|consen  320 EVKKLAELALRCLRPDPKERPTMSQVVKELEGIL  353 (361)
T ss_pred             HHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhc
Confidence            8999999999999999999999999999995433

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=99.94  E-value=1.9e-26  Score=191.33  Aligned_cols=137  Identities=22%  Similarity=0.220  Sum_probs=107.1

Q ss_pred             eeecCCCCCCeeeCCCC-cEEEeccccccccCCCCCCceeEeeccccccchhhhh--hCCCCCCcccHhHHHHHHHHHhC
Q 045790            5 AYSRSPELPPGRGDFNF-NAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIS--TGRVSKELDVFSFRVVALEIATG   81 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~-~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~--~~~~~~~~Dv~s~G~vl~el~~g   81 (231)
                      ..|||||++|||++.++ .+||+|||+++...... .......||+.|||||++.  ...|+.++||||||+++||+++|
T Consensus       164 iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~-~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~  242 (362)
T KOG0192|consen  164 IIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK-TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTG  242 (362)
T ss_pred             eeecccChhhEEEcCCCCEEEECCCccceeecccc-ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHC
Confidence            47999999999999997 99999999998765422 1223368999999999998  55899999999999999999999


Q ss_pred             CCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHH
Q 045790           82 RKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQ  161 (231)
Q Consensus        82 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  161 (231)
                      +.||......                                       ++...+            .....+...+..+
T Consensus       243 ~~Pf~~~~~~---------------------------------------~~~~~v------------~~~~~Rp~~p~~~  271 (362)
T KOG0192|consen  243 EIPFEDLAPV---------------------------------------QVASAV------------VVGGLRPPIPKEC  271 (362)
T ss_pred             CCCCCCCCHH---------------------------------------HHHHHH------------HhcCCCCCCCccC
Confidence            9999764421                                       111111            1123333344446


Q ss_pred             HHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcc
Q 045790          162 MTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFE  193 (231)
Q Consensus       162 ~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~  193 (231)
                      ...+..++.+||+.||++||++.+++..|...
T Consensus       272 ~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~  303 (362)
T KOG0192|consen  272 PPHLSSLMERCWLVDPSRRPSFLEIVSRLESI  303 (362)
T ss_pred             CHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHH
Confidence            67788999999999999999999999998853

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=99.94  E-value=2.9e-26  Score=176.68  Aligned_cols=177  Identities=17%  Similarity=0.086  Sum_probs=129.0

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhC-CCCCCcccHhHHHHHHHHHhCCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTG-RVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      .||||||.|+|++.+|.+|++|||+++.++...... ...+-|.+|+|||.+.+. .|...+|+||.||++.||+.|.+.
T Consensus       123 lHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~-~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~  201 (318)
T KOG0659|consen  123 LHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQ-THQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPF  201 (318)
T ss_pred             hcccCCccceEEcCCCcEEeecccchhccCCCCccc-ccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCC
Confidence            599999999999999999999999999887543333 334678899999999875 499999999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |.+...-+.+..+.+...++..+.           |++..+-.....+..             .-.+.+..-+ ......
T Consensus       202 fpG~sDidQL~~If~~LGTP~~~~-----------WP~~~~lpdY~~~~~-------------~P~~~~~~lf-~aas~d  256 (318)
T KOG0659|consen  202 FPGDSDIDQLSKIFRALGTPTPDQ-----------WPEMTSLPDYVKIQQ-------------FPKPPLNNLF-PAASSD  256 (318)
T ss_pred             CCCCchHHHHHHHHHHcCCCCccc-----------CccccccccHHHHhc-------------CCCCcccccc-ccccHH
Confidence            999887777777776555554433           333322222221110             0111111111 122344


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhcccCC-CCCCCCCCCCcc
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNFETTM-PNLPSKMHVPSY  208 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~-~~~~~~~~~~~~  208 (231)
                      .++|+..++.+||.+|.|+.|++.|.+|...+ |.++.+++.+..
T Consensus       257 ~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~P~pt~~~~lp~p~~  301 (318)
T KOG0659|consen  257 ALDLLSKMLTYNPKKRITASQALKHPYFKSLPLPTPPSKLPIPST  301 (318)
T ss_pred             HHHHHHhhhccCchhcccHHHHhcchhhhcCCCCCChhhCcCCcc
Confidence            58999999999999999999999999997644 666777666554

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.93  E-value=5.2e-26  Score=187.38  Aligned_cols=171  Identities=18%  Similarity=0.101  Sum_probs=116.5

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhh-CCCCCCcccHhHHHHHHHHHhCCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIST-GRVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      ||||+||+|||+..+..+||+|||+|+.....  ...+..+.|.+|+|||++.. +-|+.+.|+|++||+++|+++-++.
T Consensus       132 FHRDlKPENiLi~~~~~iKiaDFGLARev~Sk--pPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPL  209 (538)
T KOG0661|consen  132 FHRDLKPENILISGNDVIKIADFGLAREVRSK--PPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPL  209 (538)
T ss_pred             ccccCChhheEecccceeEecccccccccccC--CCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhccc
Confidence            59999999999999999999999999987532  22355788999999999854 5689999999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |.+.+.-+.+..+-.-...+..+           .|..+      ..+.    .... -.......-.+..-. ......
T Consensus       210 FPG~sE~Dqi~KIc~VLGtP~~~-----------~~~eg------~~La----~~mn-f~~P~~~~~~l~~L~-p~~s~~  266 (538)
T KOG0661|consen  210 FPGASEIDQIYKICEVLGTPDKD-----------SWPEG------YNLA----SAMN-FRFPQVKPSPLKDLL-PNASSE  266 (538)
T ss_pred             CCCCcHHHHHHHHHHHhCCCccc-----------cchhH------HHHH----HHhc-cCCCcCCCCChHHhC-cccCHH
Confidence            99887665555554322222211           11111      0000    0000 000000011111111 124567


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhcccCCCCCCC
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNFETTMPNLPS  201 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~~~~~~  201 (231)
                      ...++.+|+.|||++||||.|+++|+.|.-..+..+.
T Consensus       267 ~~~li~~ll~WDP~kRpTA~~al~~pffq~~~~~~~~  303 (538)
T KOG0661|consen  267 AASLIERLLAWDPDKRPTASQALQHPFFQVGRASGSS  303 (538)
T ss_pred             HHHHHHHHhcCCCccCccHHHHhcCcccccccccccc
Confidence            7889999999999999999999999999665544333

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.93  E-value=4.1e-27  Score=203.49  Aligned_cols=153  Identities=21%  Similarity=0.252  Sum_probs=125.9

Q ss_pred             eeeee-ecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEee--ccccccchhhhhhCCCCCCcccHhHHHHHHHH
Q 045790            2 VEVAY-SRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLV--GTLAYMASEYISTGRVSKELDVFSFRVVALEI   78 (231)
Q Consensus         2 ~~~~~-~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~--g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el   78 (231)
                      .+++| ||||..+|||++.|..+||+|||+++.+.++......+..  -...|.|||.+....++.++||||||||+||+
T Consensus       748 sdm~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEV  827 (996)
T KOG0196|consen  748 SDMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEV  827 (996)
T ss_pred             hhcCchhhhhhhhheeeccceEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEe
Confidence            46888 9999999999999999999999999988665433222222  24689999999999999999999999999997


Q ss_pred             H-hCCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcc
Q 045790           79 A-TGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRF  157 (231)
Q Consensus        79 ~-~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  157 (231)
                      + .|..||.++..+                                                    +..+.++..++-..
T Consensus       828 mSyGERPYWdmSNQ----------------------------------------------------dVIkaIe~gyRLPp  855 (996)
T KOG0196|consen  828 MSYGERPYWDMSNQ----------------------------------------------------DVIKAIEQGYRLPP  855 (996)
T ss_pred             cccCCCcccccchH----------------------------------------------------HHHHHHHhccCCCC
Confidence            6 599999876643                                                    23334455666666


Q ss_pred             cHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCCCCCCCCCCCC
Q 045790          158 DEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTMPNLPSKMHVP  206 (231)
Q Consensus       158 ~~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~~~~~~~~~~~  206 (231)
                      +.++...+..||+.||++|...||++.||+.+|.+....|.+-+.....
T Consensus       856 PmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrnP~SLk~~~~~  904 (996)
T KOG0196|consen  856 PMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRNPNSLKTIAPE  904 (996)
T ss_pred             CCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCchhhcccCCC
Confidence            7788899999999999999999999999999999988888777765443

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=99.93  E-value=2.3e-26  Score=191.92  Aligned_cols=135  Identities=24%  Similarity=0.204  Sum_probs=109.1

Q ss_pred             ecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCCcc
Q 045790            7 SRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRKVI   85 (231)
Q Consensus         7 ~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~p~   85 (231)
                      ||||.++|||++++..+||+|||+++...++.........-...|+|||.+....|+.++||||||+++||++| |+.||
T Consensus       326 HRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py  405 (468)
T KOG0197|consen  326 HRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPY  405 (468)
T ss_pred             chhhhhhheeeccCceEEEcccccccccCCCceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCC
Confidence            99999999999999999999999999655433222222333568999999999999999999999999999997 88898


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      ..+.-.                                                    .....++.+.+...+..|...+
T Consensus       406 ~~msn~----------------------------------------------------ev~~~le~GyRlp~P~~CP~~v  433 (468)
T KOG0197|consen  406 PGMSNE----------------------------------------------------EVLELLERGYRLPRPEGCPDEV  433 (468)
T ss_pred             CCCCHH----------------------------------------------------HHHHHHhccCcCCCCCCCCHHH
Confidence            765421                                                    2333445666666677788899


Q ss_pred             HHHHHhhcCCCCCCCCCHHHHHHHHhcc
Q 045790          166 LIVGLWCAHPDRCFRPSIRQAIQVLNFE  193 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps~~ell~~l~~~  193 (231)
                      .++|..||+.+|++|||+..+...+...
T Consensus       434 Y~lM~~CW~~~P~~RPtF~~L~~~l~~~  461 (468)
T KOG0197|consen  434 YELMKSCWHEDPEDRPTFETLREVLEDF  461 (468)
T ss_pred             HHHHHHHhhCCcccCCCHHHHHHHHHHh
Confidence            9999999999999999999988877653

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.93  E-value=5.2e-26  Score=190.87  Aligned_cols=140  Identities=19%  Similarity=0.183  Sum_probs=109.0

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCc
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      ..|||||.+|||++.++.+||+|||+|..+.... ....+.+||+.|||||++....|..++||||+||+.+||+.|.+|
T Consensus       390 IiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~-~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPP  468 (550)
T KOG0578|consen  390 IIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQ-SKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPP  468 (550)
T ss_pred             eeeeccccceeEeccCCcEEEeeeeeeecccccc-CccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCC
Confidence            3599999999999999999999999998876533 245667999999999999889999999999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |-.+.+-..+..|..+..                                                +.+  ...+.....
T Consensus       469 YlnE~PlrAlyLIa~ng~------------------------------------------------P~l--k~~~klS~~  498 (550)
T KOG0578|consen  469 YLNENPLRALYLIATNGT------------------------------------------------PKL--KNPEKLSPE  498 (550)
T ss_pred             ccCCChHHHHHHHhhcCC------------------------------------------------CCc--CCccccCHH
Confidence            976543211111111100                                                111  122233456


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhcccC
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNFETT  195 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~  195 (231)
                      |-+|+.+||+.|+++|++|.|||+|+.+...
T Consensus       499 ~kdFL~~cL~~dv~~RasA~eLL~HpFl~~a  529 (550)
T KOG0578|consen  499 LKDFLDRCLVVDVEQRASAKELLEHPFLKMA  529 (550)
T ss_pred             HHHHHHHHhhcchhcCCCHHHHhcChhhhhc
Confidence            7889999999999999999999999988443

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.93  E-value=3.9e-26  Score=186.51  Aligned_cols=139  Identities=20%  Similarity=0.238  Sum_probs=109.7

Q ss_pred             eeeeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCC
Q 045790            3 EVAYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGR   82 (231)
Q Consensus         3 ~~~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~   82 (231)
                      +-..|||||+.|||+...|.+||+|||++.++...... ..+++||+.|||||++.+..|+.++||||+||+.+||.+|.
T Consensus       130 ~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~r-r~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~Ge  208 (467)
T KOG0201|consen  130 EKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKR-RKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGE  208 (467)
T ss_pred             cceecccccccceeEeccCcEEEEecceeeeeechhhc-cccccccccccchhhhccccccchhhhhhhhHHHHHHhcCC
Confidence            45679999999999999999999999999887654333 37789999999999999888999999999999999999999


Q ss_pred             CccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           83 KVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        83 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      +|+....+...+..                                                    +...-.+.++....
T Consensus       209 PP~s~~hPmrvlfl----------------------------------------------------Ipk~~PP~L~~~~S  236 (467)
T KOG0201|consen  209 PPHSKLHPMRVLFL----------------------------------------------------IPKSAPPRLDGDFS  236 (467)
T ss_pred             CCCcccCcceEEEe----------------------------------------------------ccCCCCCccccccC
Confidence            99986653211111                                                    11111122222445


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      ..+.+|+..|++.||+.||||.+|+.|-.-..
T Consensus       237 ~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~  268 (467)
T KOG0201|consen  237 PPFKEFVEACLDKNPEFRPSAKELLKHKFIKR  268 (467)
T ss_pred             HHHHHHHHHHhhcCcccCcCHHHHhhhHHHHh
Confidence            56788999999999999999999999876544

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=99.93  E-value=1.8e-26  Score=180.83  Aligned_cols=163  Identities=20%  Similarity=0.150  Sum_probs=111.1

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhh-CCCCCCcccHhHHHHHHHHHhCCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIST-GRVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      .||||||+|||++.++.+||+|||+++.+... .......+.|.+|+|||.+.+ .+|...+|||++||++.||++|.+.
T Consensus       123 IHRDIKPENILit~~gvvKLCDFGFAR~L~~p-gd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL  201 (396)
T KOG0593|consen  123 IHRDIKPENILITQNGVVKLCDFGFARTLSAP-GDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPL  201 (396)
T ss_pred             ecccCChhheEEecCCcEEeccchhhHhhcCC-cchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcC
Confidence            59999999999999999999999999988632 222344677899999999988 6799999999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhc-ccccCcccHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAAN-ERLDSRFDEQQMT  163 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~  163 (231)
                      |.+.+.-+.+-.|+.......++.......   +....|.                   .+...-+ +.+...+ +....
T Consensus       202 ~PG~SDiDQLy~I~ktLG~L~prhq~iF~~---N~~F~Gv-------------------~lP~~~~~epLe~k~-p~~s~  258 (396)
T KOG0593|consen  202 WPGRSDIDQLYLIRKTLGNLIPRHQSIFSS---NPFFHGV-------------------RLPEPEHPEPLERKY-PKISN  258 (396)
T ss_pred             CCCcchHHHHHHHHHHHcccCHHHHHHhcc---CCceeee-------------------ecCCCCCccchhhhc-ccchH
Confidence            988776555555543332222211110000   0000000                   0000000 0111111 11233


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      -.++++..|++.||.+|++.+|++.|.+|
T Consensus       259 ~~ld~~k~cL~~dP~~R~sc~qll~H~yF  287 (396)
T KOG0593|consen  259 VLLDLLKKCLKMDPDDRLSCEQLLHHPYF  287 (396)
T ss_pred             HHHHHHHHHhcCCccccccHHHHhcChHH
Confidence            57899999999999999999999999998

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=99.92  E-value=8.6e-27  Score=189.06  Aligned_cols=142  Identities=20%  Similarity=0.210  Sum_probs=105.8

Q ss_pred             eee-ecCCCCCCeeeCCC---CcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCC---CCCCcccHhHHHHHH
Q 045790            4 VAY-SRSPELPPGRGDFN---FNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGR---VSKELDVFSFRVVAL   76 (231)
Q Consensus         4 ~~~-~rdlk~~nil~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~---~~~~~Dv~s~G~vl~   76 (231)
                      .|. ||||||+|||+..+   ..+||+|||+++..+.  .....+.+||+.|.|||++....   +..++|+||+||+++
T Consensus       295 ~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g~--~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLf  372 (475)
T KOG0615|consen  295 QGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVSGE--GSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLF  372 (475)
T ss_pred             cCcccccCCcceEEeccCCcceEEEecccchhhcccc--ceehhhhcCCccccChhheecCCeecccchheeeeccceEE
Confidence            344 99999999999866   7799999999998763  23346789999999999997654   234789999999999


Q ss_pred             HHHhCCCccccchhhh-hhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccC
Q 045790           77 EIATGRKVINRYKAQK-LRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDS  155 (231)
Q Consensus        77 el~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  155 (231)
                      -+++|.+||.....+. +.+++.                       .|+.                          ...+
T Consensus       373 vcLsG~pPFS~~~~~~sl~eQI~-----------------------~G~y--------------------------~f~p  403 (475)
T KOG0615|consen  373 VCLSGYPPFSEEYTDPSLKEQIL-----------------------KGRY--------------------------AFGP  403 (475)
T ss_pred             EEeccCCCcccccCCccHHHHHh-----------------------cCcc--------------------------cccC
Confidence            9999999998766432 112111                       0000                          0000


Q ss_pred             cccHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          156 RFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       156 ~~~~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                      ....+-..+.++|+.++|.-||++|||+.|+|+|+|+....
T Consensus       404 ~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~~  444 (475)
T KOG0615|consen  404 LQWDRISEEALDLINWMLVVDPENRPSADEALNHPWFKDAP  444 (475)
T ss_pred             hhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhccc
Confidence            11123455678899999999999999999999999997654

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=99.92  E-value=2.5e-25  Score=185.99  Aligned_cols=138  Identities=14%  Similarity=0.112  Sum_probs=107.6

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCC------------ceeEeeccccccchhhhhhCCCCCCcccHhHHH
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGP------------KTIMLVGTLAYMASEYISTGRVSKELDVFSFRV   73 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~------------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~   73 (231)
                      .||||||+|||+|.++++||+|||.++.+......            ...+++||..|.+||++.....+..+|+|+|||
T Consensus       196 IHRDlKPENILLd~dmhikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGC  275 (604)
T KOG0592|consen  196 IHRDLKPENILLDKDGHIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGC  275 (604)
T ss_pred             eeccCChhheeEcCCCcEEEeeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHH
Confidence            59999999999999999999999999887642211            125689999999999999888999999999999


Q ss_pred             HHHHHHhCCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccc
Q 045790           74 VALEIATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERL  153 (231)
Q Consensus        74 vl~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  153 (231)
                      ++|.|+.|++||...+..-++.+|+.                                                 ++-.+
T Consensus       276 ilyQmlaG~PPFra~NeyliFqkI~~-------------------------------------------------l~y~f  306 (604)
T KOG0592|consen  276 ILYQMLAGQPPFRAANEYLIFQKIQA-------------------------------------------------LDYEF  306 (604)
T ss_pred             HHHHHhcCCCCCccccHHHHHHHHHH-------------------------------------------------hcccC
Confidence            99999999999987664433333221                                                 01112


Q ss_pred             cCcccHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          154 DSRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       154 ~~~~~~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                      ...+    .....+|+.+-|..||.+|+|+.+|.+|+.|...-
T Consensus       307 p~~f----p~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~Vd  345 (604)
T KOG0592|consen  307 PEGF----PEDARDLIKKLLVRDPSDRLTSQQIKAHPFFEGVD  345 (604)
T ss_pred             CCCC----CHHHHHHHHHHHccCccccccHHHHhhCcccccCC
Confidence            2222    24556677788888999999999999999996543

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.92  E-value=2.4e-25  Score=173.09  Aligned_cols=136  Identities=21%  Similarity=0.170  Sum_probs=103.5

Q ss_pred             eeeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCC
Q 045790            4 VAYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRK   83 (231)
Q Consensus         4 ~~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~   83 (231)
                      +..||||||.||+++.+|.+||+|||+++++.... .-..+.+||+.||+||.++..+|+.++||||+||+++||..-..
T Consensus       148 ~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~s~~-tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~  226 (375)
T KOG0591|consen  148 TVMHRDIKPANIFLTANGVVKLGDFGLGRFLSSKT-TFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQS  226 (375)
T ss_pred             ceeeccCcchheEEcCCCceeeccchhHhHhcchh-HHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCC
Confidence            35799999999999999999999999999886432 23466899999999999999999999999999999999999999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCccc-HHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFD-EQQM  162 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~  162 (231)
                      ||.+.+-.                                          +.-.+ +...        .+ ...+ ..-.
T Consensus       227 PF~g~n~~------------------------------------------~L~~K-I~qg--------d~-~~~p~~~YS  254 (375)
T KOG0591|consen  227 PFYGDNLL------------------------------------------SLCKK-IEQG--------DY-PPLPDEHYS  254 (375)
T ss_pred             CcccccHH------------------------------------------HHHHH-HHcC--------CC-CCCcHHHhh
Confidence            99764321                                          11111 1011        11 1112 2334


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      ..+..++..|+..|++.||+...+++.+..
T Consensus       255 ~~l~~li~~ci~vd~~~RP~t~~~v~di~~  284 (375)
T KOG0591|consen  255 TDLRELINMCIAVDPEQRPDTVPYVQDIQS  284 (375)
T ss_pred             hHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence            566778889999999999997667666654

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=99.92  E-value=6.6e-26  Score=190.58  Aligned_cols=135  Identities=22%  Similarity=0.313  Sum_probs=110.1

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .|||||..||||..+..+||+|||-++.+...  ...+.++||..|||||+++..+.+.|+||||||+|+|||+||..||
T Consensus       234 IHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~--STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPY  311 (904)
T KOG4721|consen  234 IHRDLKSPNILISYDDVVKISDFGTSKELSDK--STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPY  311 (904)
T ss_pred             hhhccCCCceEeeccceEEeccccchHhhhhh--hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCc
Confidence            59999999999999999999999999876532  3356789999999999999999999999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      .+.+..                 ..                                  +..+-...|.-..+.++...|
T Consensus       312 kdVdss-----------------AI----------------------------------IwGVGsNsL~LpvPstcP~Gf  340 (904)
T KOG4721|consen  312 KDVDSS-----------------AI----------------------------------IWGVGSNSLHLPVPSTCPDGF  340 (904)
T ss_pred             cccchh-----------------ee----------------------------------EEeccCCcccccCcccCchHH
Confidence            865421                 00                                  001111233334556777888


Q ss_pred             HHHHHhhcCCCCCCCCCHHHHHHHHhcc
Q 045790          166 LIVGLWCAHPDRCFRPSIRQAIQVLNFE  193 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps~~ell~~l~~~  193 (231)
                      ..|+++||+..|..||++++++.||...
T Consensus       341 klL~Kqcw~sKpRNRPSFrqil~HldIa  368 (904)
T KOG4721|consen  341 KLLLKQCWNSKPRNRPSFRQILLHLDIA  368 (904)
T ss_pred             HHHHHHHHhcCCCCCccHHHHHHHHhhc
Confidence            9999999999999999999999999753

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=99.92  E-value=1.9e-25  Score=178.63  Aligned_cols=168  Identities=18%  Similarity=0.127  Sum_probs=116.7

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCC-CceeEeeccccccchhhhhh-CCCCCCcccHhHHHHHHHHHhCC
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELG-PKTIMLVGTLAYMASEYIST-GRVSKELDVFSFRVVALEIATGR   82 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~el~~g~   82 (231)
                      ..||||||+|++++.+..+|++|||+++....... ...+..+.|.+|+|||++.. ..|+.+.||||.||++.||++|+
T Consensus       146 ViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gk  225 (359)
T KOG0660|consen  146 VIHRDLKPSNLLLNADCDLKICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGK  225 (359)
T ss_pred             ccccccchhheeeccCCCEEeccccceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCC
Confidence            46999999999999999999999999998753211 11245677899999999865 45999999999999999999999


Q ss_pred             CccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           83 KVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        83 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      +.|.+.+.-+.+..+..-.+.+..+.......+               ....++.+.......      .+..-++ ..-
T Consensus       226 plFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~---------------~ar~yi~slp~~p~~------~f~~~fp-~a~  283 (359)
T KOG0660|consen  226 PLFPGKDYVHQLQLILELLGTPSEEDLQKIRSE---------------KARPYIKSLPQIPKQ------PFSSIFP-NAN  283 (359)
T ss_pred             CCCCCCchHHHHHHHHHhcCCCCHHHHHHhccH---------------HHHHHHHhCCCCCCC------CHHHHcC-CCC
Confidence            999988877667777665555543322222111               111122221111100      0000000 112


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      ...++|+.++|..||.+|+|+.|+++|++...
T Consensus       284 p~AidLlekmL~fdP~kRita~eAL~hPYl~~  315 (359)
T KOG0660|consen  284 PLAIDLLEKMLVFDPKKRITAEEALAHPYLAP  315 (359)
T ss_pred             HHHHHHHHHHhccCccccCCHHHHhcChhhhh
Confidence            34578899999999999999999999999854

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.92  E-value=6.1e-25  Score=179.95  Aligned_cols=149  Identities=21%  Similarity=0.224  Sum_probs=106.3

Q ss_pred             ee-ecCCCCCCeeeCCCCcEEEeccccccccCCCCCCc--e-eEeeccccccchhhhhh--CCCCCCcccHhHHHHHHHH
Q 045790            5 AY-SRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPK--T-IMLVGTLAYMASEYIST--GRVSKELDVFSFRVVALEI   78 (231)
Q Consensus         5 ~~-~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~--~-~~~~g~~~y~aPE~~~~--~~~~~~~Dv~s~G~vl~el   78 (231)
                      || |||||+.||||+.+|.+||+|||++-.+-......  . .+.+|++.|||||++.+  ..|+.|+|||||||+..|+
T Consensus       146 G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~EL  225 (516)
T KOG0582|consen  146 GHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACEL  225 (516)
T ss_pred             CceecccccccEEEcCCCcEEEcCceeeeeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHH
Confidence            44 99999999999999999999999876554322111  1 45689999999999643  4599999999999999999


Q ss_pred             HhCCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCccc
Q 045790           79 ATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFD  158 (231)
Q Consensus        79 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  158 (231)
                      .+|..||..+-+.+.+-....+.+..+..                                           -.+..+..
T Consensus       226 A~G~aPf~k~pPmkvLl~tLqn~pp~~~t-------------------------------------------~~~~~d~~  262 (516)
T KOG0582|consen  226 AHGHAPFSKYPPMKVLLLTLQNDPPTLLT-------------------------------------------SGLDKDED  262 (516)
T ss_pred             hcCCCCcccCChHHHHHHHhcCCCCCccc-------------------------------------------ccCChHHh
Confidence            99999998765433222222222111100                                           00000011


Q ss_pred             HHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          159 EQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       159 ~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                      ......|.+++..|+++||.+|||+.+++.|..|....
T Consensus       263 k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~~k  300 (516)
T KOG0582|consen  263 KKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKKAK  300 (516)
T ss_pred             hhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhhcc
Confidence            11223688899999999999999999999999986543

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.91  E-value=9.3e-25  Score=181.19  Aligned_cols=176  Identities=18%  Similarity=0.100  Sum_probs=124.1

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhC-CCCCCcccHhHHHHHHHHHhCCC
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTG-RVSKELDVFSFRVVALEIATGRK   83 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~el~~g~~   83 (231)
                      ..|||||.+|||||.+|.+||+|||+++++...........+-|.+|++||.+.+. .|+.++|+||+||++.||+.|++
T Consensus       239 vlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkP  318 (560)
T KOG0600|consen  239 VLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKP  318 (560)
T ss_pred             eeeccccccceEEcCCCCEEeccccceeeccCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCC
Confidence            35999999999999999999999999998876554445556778999999999885 49999999999999999999999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      .|.+...-+.+..|......+...+|.....+.+......      ......+             .... ..+    ..
T Consensus       319 I~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~------~~y~r~l-------------~E~~-~~~----~~  374 (560)
T KOG0600|consen  319 ILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQ------QPYKRRL-------------RETF-KDF----PA  374 (560)
T ss_pred             CcCCccHHHHHHHHHHHhCCCChhccccccCCcccccCCC------CcccchH-------------HHHh-ccC----CH
Confidence            9999888877888877666666555442222211111000      0000000             0110 111    22


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhcccC-CCCCCCCCC
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNFETT-MPNLPSKMH  204 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~-~~~~~~~~~  204 (231)
                      ..+.|+..+|..||.+|.||.+++++-+|... .+..|..++
T Consensus       375 ~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~t~p~~~~p~~Lp  416 (560)
T KOG0600|consen  375 SALDLLEKLLSLDPDKRGTASSALQSEYFTTEPLPCDPSSLP  416 (560)
T ss_pred             HHHHHHHHHhccCccccccHHHHhcCcccccCCCCCCcccCC
Confidence            34666777777899999999999999999333 344454443

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=99.91  E-value=1.8e-24  Score=171.69  Aligned_cols=178  Identities=19%  Similarity=0.078  Sum_probs=124.6

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCC-CCCCcccHhHHHHHHHHHhCCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGR-VSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~-~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      .|||||++|+|++..|.+||+|||+++.++.... .....+.|.+|+|||.+.+.. |+.++|+||+||++.|++.+++.
T Consensus       199 lHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~k-~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPl  277 (419)
T KOG0663|consen  199 LHRDLKTSNLLLSHKGILKIADFGLAREYGSPLK-PYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPL  277 (419)
T ss_pred             EecccchhheeeccCCcEEecccchhhhhcCCcc-cCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCC
Confidence            5999999999999999999999999999875422 233456688999999998865 99999999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHH-HHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQ-QMT  163 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~  163 (231)
                      |.+....+.+..|...+..++..           +|++-....      .|- ........    -..++..+... -..
T Consensus       278 f~G~sE~dQl~~If~llGtPte~-----------iwpg~~~lp------~~k-~~~f~~~p----yn~lr~kF~~~~lse  335 (419)
T KOG0663|consen  278 FPGKSEIDQLDKIFKLLGTPSEA-----------IWPGYSELP------AVK-KMTFSEHP----YNNLRKKFGALSLSE  335 (419)
T ss_pred             CCCCchHHHHHHHHHHhCCCccc-----------cCCCccccc------hhh-ccccCCCC----chhhhhhccccccch
Confidence            99988887777777655554433           333222111      000 00000000    01111111111 234


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhcccC-CCCCCCCCCCC
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNFETT-MPNLPSKMHVP  206 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~-~~~~~~~~~~~  206 (231)
                      ...+|+...+.+||.+|.||.|.|.|-+|.-. .|..|..++.+
T Consensus       336 ~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~P~p~~P~~~Pt~  379 (419)
T KOG0663|consen  336 QGFDLLNKLLTYDPGKRITAEDGLKHEYFRETPLPIDPSMFPTW  379 (419)
T ss_pred             hHHHHHHHHhccCccccccHHHhhcccccccCCCCCChhhcCCC
Confidence            45778888899999999999999999999554 46666655543

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.91  E-value=1.9e-25  Score=180.73  Aligned_cols=143  Identities=20%  Similarity=0.184  Sum_probs=102.9

Q ss_pred             ee-ecCCCCCCeeeCC-CCcEEEeccccccccCC--CCCCceeEeeccccccchhhhhhCC-CCCCcccHhHHHHHHHHH
Q 045790            5 AY-SRSPELPPGRGDF-NFNAKLGDFGLARLMDH--ELGPKTIMLVGTLAYMASEYISTGR-VSKELDVFSFRVVALEIA   79 (231)
Q Consensus         5 ~~-~rdlk~~nil~~~-~~~~kl~Dfg~~~~~~~--~~~~~~~~~~g~~~y~aPE~~~~~~-~~~~~Dv~s~G~vl~el~   79 (231)
                      || |||||++|||++. ++.+||+|||+++....  ..........||+.|||||++..+. ...++||||+||++.||+
T Consensus       137 g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~  216 (313)
T KOG0198|consen  137 GIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEML  216 (313)
T ss_pred             CEeccCcccceEEEeCCCCeEEeccCccccccccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEecc
Confidence            44 9999999999999 79999999999876653  1112234578999999999998533 345899999999999999


Q ss_pred             hCCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccH
Q 045790           80 TGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDE  159 (231)
Q Consensus        80 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  159 (231)
                      +|+.||....                                         ....+.-......         ..+.++.
T Consensus       217 Tg~~PW~~~~-----------------------------------------~~~~~~~~ig~~~---------~~P~ip~  246 (313)
T KOG0198|consen  217 TGKPPWSEFF-----------------------------------------EEAEALLLIGRED---------SLPEIPD  246 (313)
T ss_pred             CCCCcchhhc-----------------------------------------chHHHHHHHhccC---------CCCCCCc
Confidence            9999997520                                         0111111111011         0012222


Q ss_pred             HHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCCC
Q 045790          160 QQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTMP  197 (231)
Q Consensus       160 ~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~~  197 (231)
                      .......+|+..|++.||++||||.++++|+.-....+
T Consensus       247 ~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~~  284 (313)
T KOG0198|consen  247 SLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQNSI  284 (313)
T ss_pred             ccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhcccc
Confidence            33445677889999999999999999999998866555

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.91  E-value=2.5e-24  Score=182.21  Aligned_cols=137  Identities=22%  Similarity=0.271  Sum_probs=106.2

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .|||||..|++++++..+||+|||+|..+.. ......+.+||+-|.|||++.....+..+||||+||++|.|+.|++||
T Consensus       140 iHRDLKLGNlfL~~~~~VKIgDFGLAt~le~-~~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPF  218 (592)
T KOG0575|consen  140 IHRDLKLGNLFLNENMNVKIGDFGLATQLEY-DGERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPF  218 (592)
T ss_pred             eecccchhheeecCcCcEEecccceeeeecC-cccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCc
Confidence            5999999999999999999999999988763 234567889999999999998777899999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      ....-.+....+..+.                                                 -.+    +..-....
T Consensus       219 etk~vkety~~Ik~~~-------------------------------------------------Y~~----P~~ls~~A  245 (592)
T KOG0575|consen  219 ETKTVKETYNKIKLNE-------------------------------------------------YSM----PSHLSAEA  245 (592)
T ss_pred             ccchHHHHHHHHHhcC-------------------------------------------------ccc----ccccCHHH
Confidence            8754332222222111                                                 011    11112233


Q ss_pred             HHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          166 LIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                      .+|+...|+.||.+|||+.+|+.|..|.+..
T Consensus       246 ~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~~g~  276 (592)
T KOG0575|consen  246 KDLIRKLLRPNPSERPSLDEVLDHPFFKSGF  276 (592)
T ss_pred             HHHHHHHhcCCcccCCCHHHHhcCHhhhCCC
Confidence            5677788999999999999999999994433

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=99.91  E-value=3.3e-24  Score=182.86  Aligned_cols=183  Identities=13%  Similarity=0.051  Sum_probs=121.5

Q ss_pred             eecCCCCCCeeeCC--CCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCC
Q 045790            6 YSRSPELPPGRGDF--NFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~--~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~   83 (231)
                      .|-||||+||||..  ...+||+|||.+++....    ..+.+.+..|+|||++.+.+|+.+.|||||||++.||++|.+
T Consensus       311 IHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~----vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~P  386 (586)
T KOG0667|consen  311 IHCDLKPENILLKDPKRSRIKVIDFGSSCFESQR----VYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEP  386 (586)
T ss_pred             eeccCChhheeeccCCcCceeEEecccccccCCc----ceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCcc
Confidence            59999999999974  346999999999886432    236788999999999999999999999999999999999999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccc-----hhhc-cCCCCC-----CCchhHHHHHHHhhcchhhhhhccc
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGE-----KAVL-GGSSKN-----YCPKLVAWVWDLYGERKLLSAANER  152 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~-~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~  152 (231)
                      .|.+.+..+.+..|+.-...++..++.....-..     +... ......     .................... ....
T Consensus       387 LfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~-~~~~  465 (586)
T KOG0667|consen  387 LFPGDNEYDQLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPP-GSRS  465 (586)
T ss_pred             ccCCCCHHHHHHHHHHHhCCCCHHHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCC-CCcc
Confidence            9999999999888887555443332221111000     0000 000000     00000011111110000000 1112


Q ss_pred             ccCcccHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcc
Q 045790          153 LDSRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFE  193 (231)
Q Consensus       153 l~~~~~~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~  193 (231)
                      +...........|++++++|+++||.+|+|+.++++|++..
T Consensus       466 l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~Hpfl~  506 (586)
T KOG0667|consen  466 LESGLPKADDKLFIDFLKRCLEWDPAERITPAQALNHPFLT  506 (586)
T ss_pred             cchhcccccHHHHHHHHHHHhccCchhcCCHHHHhcCcccc
Confidence            22223335567899999999999999999999999999997

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=99.91  E-value=1.4e-24  Score=173.95  Aligned_cols=165  Identities=16%  Similarity=0.105  Sum_probs=117.2

Q ss_pred             eecCCCCCCeeeCCC-CcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCC-CCCCcccHhHHHHHHHHHhCCC
Q 045790            6 YSRSPELPPGRGDFN-FNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGR-VSKELDVFSFRVVALEIATGRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~-~~~~~Dv~s~G~vl~el~~g~~   83 (231)
                      -||||||+|+|+|.. |.+||+|||.|+.+..+..  ..+.+-+..|+|||.+.+.. |+.+.||||.|||+.||+.|++
T Consensus       147 cHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~ep--niSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~p  224 (364)
T KOG0658|consen  147 CHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGEP--NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQP  224 (364)
T ss_pred             ccCCCChheEEEcCCCCeEEeccCCcceeeccCCC--ceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCc
Confidence            399999999999964 8999999999998764432  24455578999999998864 9999999999999999999999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      .|.+.+..+.+..|..-...++.+.+..+...-.+        .....+....|        ..+        +......
T Consensus       225 lFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~--------~~~p~ik~~~~--------~~~--------~~~~~~~  280 (364)
T KOG0658|consen  225 LFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTE--------FKFPQIKAHPW--------HKV--------FFKRLPP  280 (364)
T ss_pred             ccCCCCHHHHHHHHHHHhCCCCHHHHhhcCccccc--------ccCcccccccc--------eee--------cccCCCH
Confidence            99998888777777765555544333222111000        00011111100        000        1112234


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                      ..++|+.++++++|++|.++.|++.|..|...-
T Consensus       281 d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr  313 (364)
T KOG0658|consen  281 DALDLLSKLLQYSPSKRLSALEALAHPFFDELR  313 (364)
T ss_pred             HHHHHHHHHhccChhhcCCHHHHhcchhhHHhh
Confidence            568899999999999999999999999985443

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.90  E-value=6.7e-24  Score=177.40  Aligned_cols=136  Identities=21%  Similarity=0.138  Sum_probs=105.5

Q ss_pred             eeecCCCCCCeeeCCC-CcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCC-CC-CCcccHhHHHHHHHHHhC
Q 045790            5 AYSRSPELPPGRGDFN-FNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGR-VS-KELDVFSFRVVALEIATG   81 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~-~~-~~~Dv~s~G~vl~el~~g   81 (231)
                      .+|||||++|+|+|.+ +.+||+|||++..+. .......+.+|++.|+|||++.+.. |. .++||||+|++++.|++|
T Consensus       141 i~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~-~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G  219 (370)
T KOG0583|consen  141 IVHRDLKPENILLDGNEGNLKLSDFGLSAISP-GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCG  219 (370)
T ss_pred             EeeCCCCHHHEEecCCCCCEEEeccccccccC-CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhC
Confidence            5899999999999999 999999999998774 2334456789999999999998866 75 779999999999999999


Q ss_pred             CCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHH
Q 045790           82 RKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQ  161 (231)
Q Consensus        82 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  161 (231)
                      ..||.......                                          .........           -.++...
T Consensus       220 ~~PF~d~~~~~------------------------------------------l~~ki~~~~-----------~~~p~~~  246 (370)
T KOG0583|consen  220 RLPFDDSNVPN------------------------------------------LYRKIRKGE-----------FKIPSYL  246 (370)
T ss_pred             CCCCCCccHHH------------------------------------------HHHHHhcCC-----------ccCCCCc
Confidence            99998644221                                          111110000           0011111


Q ss_pred             -HHHHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          162 -MTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       162 -~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                       ...+..++.+|++.||.+|+|+.++++|.|+..
T Consensus       247 ~S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~  280 (370)
T KOG0583|consen  247 LSPEARSLIEKMLVPDPSTRITLLEILEHPWFQK  280 (370)
T ss_pred             CCHHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence             345678899999999999999999999999987

>PTZ00284 protein kinase; Provisional

Probab=99.90  E-value=6.8e-24  Score=183.75  Aligned_cols=176  Identities=15%  Similarity=0.037  Sum_probs=106.2

Q ss_pred             eecCCCCCCeeeCCCC----------------cEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccH
Q 045790            6 YSRSPELPPGRGDFNF----------------NAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVF   69 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~----------------~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~   69 (231)
                      .||||||+|||++.++                .+||+|||.+.....    .....+|+..|+|||++.+..++.++|||
T Consensus       254 iHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~----~~~~~~gt~~Y~APE~~~~~~~~~~~Diw  329 (467)
T PTZ00284        254 MHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCDERH----SRTAIVSTRHYRSPEVVLGLGWMYSTDMW  329 (467)
T ss_pred             ecCCCCHHHEEEecCCcccccccccccCCCCceEEECCCCccccCcc----ccccccCCccccCcHHhhcCCCCcHHHHH
Confidence            5999999999998654                499999998754321    12345789999999999888899999999


Q ss_pred             hHHHHHHHHHhCCCccccchhhhhhhhccccCCCCCCccccccccccchh-hccCCCCCCCchhHHHHHHHhhcchhhhh
Q 045790           70 SFRVVALEIATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKA-VLGGSSKNYCPKLVAWVWDLYGERKLLSA  148 (231)
Q Consensus        70 s~G~vl~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (231)
                      |+||++|||++|+.||......+....+.......+.............. +..............          +...
T Consensus       330 SlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~  399 (467)
T PTZ00284        330 SMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKH----------LARI  399 (467)
T ss_pred             HHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHH----------HHhh
Confidence            99999999999999998765443333332211111110000000000000 000000000000000          0000


Q ss_pred             hcccccCcccHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCCC
Q 045790          149 ANERLDSRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTMP  197 (231)
Q Consensus       149 ~~~~l~~~~~~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~~  197 (231)
                      ....  ..........+.+|+.+||++||++|||+.|+++|+++....+
T Consensus       400 ~~~~--~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~Hp~~~~~~~  446 (467)
T PTZ00284        400 ARAR--PVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHPYVLKYYP  446 (467)
T ss_pred             hccc--chhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcCccccccCC
Confidence            0000  0000011345779999999999999999999999999976444

>PHA02988 hypothetical protein; Provisional

Probab=99.89  E-value=1.5e-23  Score=170.43  Aligned_cols=133  Identities=15%  Similarity=0.152  Sum_probs=98.8

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhh--CCCCCCcccHhHHHHHHHHHhCCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIST--GRVSKELDVFSFRVVALEIATGRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~~Dv~s~G~vl~el~~g~~   83 (231)
                      .||||||+||+++.++.+||+|||+++.+....    ....++..|+|||.+.+  ..++.++||||||+++|++++|+.
T Consensus       145 ~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~  220 (283)
T PHA02988        145 PYKNLTSVSFLVTENYKLKIICHGLEKILSSPP----FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKI  220 (283)
T ss_pred             CCCcCChhhEEECCCCcEEEcccchHhhhcccc----ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCC
Confidence            499999999999999999999999987654321    23457789999999965  578999999999999999999999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||......+                                          .........         .....+.....
T Consensus       221 Pf~~~~~~~------------------------------------------~~~~i~~~~---------~~~~~~~~~~~  249 (283)
T PHA02988        221 PFENLTTKE------------------------------------------IYDLIINKN---------NSLKLPLDCPL  249 (283)
T ss_pred             CCCCCCHHH------------------------------------------HHHHHHhcC---------CCCCCCCcCcH
Confidence            997543221                                          111110000         00111112334


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhcc
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNFE  193 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~~  193 (231)
                      .+.+++.+||+.||++|||+.+|++.|+..
T Consensus       250 ~l~~li~~cl~~dp~~Rps~~ell~~l~~~  279 (283)
T PHA02988        250 EIKCIVEACTSHDSIKRPNIKEILYNLSLY  279 (283)
T ss_pred             HHHHHHHHHhcCCcccCcCHHHHHHHHHHH
Confidence            577899999999999999999999998753

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.89  E-value=4.4e-24  Score=173.64  Aligned_cols=159  Identities=16%  Similarity=0.088  Sum_probs=103.6

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+|||++.++.+||+|||++......  .......|+..|+|||.+.+..++.++||||+|++++++++|+.||
T Consensus       132 iH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f  209 (290)
T cd07862         132 VHRDLKPQNILVTSSGQIKLADFGLARIYSFQ--MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLF  209 (290)
T ss_pred             eeCCCCHHHEEEcCCCCEEEccccceEeccCC--cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCc
Confidence            59999999999999999999999998765432  2223456888999999998888999999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      ......+....+...........+           .         .............. ...+. .+..    .....+
T Consensus       210 ~~~~~~~~~~~i~~~~~~~~~~~~-----------~---------~~~~~~~~~~~~~~-~~~~~-~~~~----~~~~~~  263 (290)
T cd07862         210 RGSSDVDQLGKILDVIGLPGEEDW-----------P---------RDVALPRQAFHSKS-AQPIE-KFVT----DIDELG  263 (290)
T ss_pred             CCCCHHHHHHHHHHHhCCCChhhc-----------h---------hhhcccchhccCCC-CCCHH-HHcc----CCCHHH
Confidence            875544333333221111100000           0         00000000000000 00000 0000    112345


Q ss_pred             HHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          166 LIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      .+++.+|++.||++|||+.++++|++|
T Consensus       264 ~~li~~~l~~~P~~R~s~~~~l~hp~f  290 (290)
T cd07862         264 KDLLLKCLTFNPAKRISAYSALSHPYF  290 (290)
T ss_pred             HHHHHHHhccCchhcCCHHHHhcCCCC
Confidence            689999999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.89  E-value=1.9e-23  Score=169.70  Aligned_cols=161  Identities=16%  Similarity=0.076  Sum_probs=104.4

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCc
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      -+||||||+||+++.++.+||+|||++...............|+..|+|||++.+..++.++|+||+||+++++++|+.|
T Consensus       121 i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~p  200 (287)
T cd07848         121 IVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPL  200 (287)
T ss_pred             eecCCCCHHHEEEcCCCcEEEeeccCcccccccccccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCC
Confidence            36999999999999999999999999977643322223345688899999999888899999999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhccccc------Cccc
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLD------SRFD  158 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~------~~~~  158 (231)
                      |......+....+...........                       ...+    ...........+...      ....
T Consensus       201 f~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~  253 (287)
T cd07848         201 FPGESEIDQLFTIQKVLGPLPAEQ-----------------------MKLF----YSNPRFHGLRFPAVNHPQSLERRYL  253 (287)
T ss_pred             CCCCCHHHHHHHHHHhhCCCCHHH-----------------------HHhh----hccchhcccccCcccCcccHHHhhh
Confidence            976543322222111000000000                       0000    000000000000000      0000


Q ss_pred             HHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          159 EQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       159 ~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      ......+.+++.+||+.||++|||+.++++|++|
T Consensus       254 ~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f  287 (287)
T cd07848         254 GILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF  287 (287)
T ss_pred             cccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence            1123457899999999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=99.89  E-value=9.1e-24  Score=169.04  Aligned_cols=166  Identities=22%  Similarity=0.088  Sum_probs=117.5

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhC-CCCCCcccHhHHHHHHHHHhCCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTG-RVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      .||||||+|||++.+|.+||+|||+++....... .....++|.+|+|||++.+. .|+...||||+||++.||+++++.
T Consensus       142 lHRDLKPQNlLi~~~G~lKlaDFGlAra~~ip~~-~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~L  220 (323)
T KOG0594|consen  142 LHRDLKPQNLLISSSGVLKLADFGLARAFSIPMR-TYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPL  220 (323)
T ss_pred             ecccCCcceEEECCCCcEeeeccchHHHhcCCcc-cccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCC
Confidence            5999999999999999999999999987653222 23445778899999999876 589999999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCc-hhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCP-KLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      |.+....+.+.++.+....+..           +.|++........ .+..|.     ........-+.+        ..
T Consensus       221 FpG~se~~ql~~If~~lGtP~e-----------~~Wp~v~~~~~~k~~f~~~~-----~~~~l~~~~~~~--------~~  276 (323)
T KOG0594|consen  221 FPGDSEIDQLFRIFRLLGTPNE-----------KDWPGVSSLPDYKAPFPKWP-----GPKDLSSILPKL--------DP  276 (323)
T ss_pred             CCCCcHHHHHHHHHHHcCCCCc-----------cCCCCccccccccccCcCCC-----CccchHHhcccc--------Cc
Confidence            9998887777777654444433           2233222211111 111110     000000011111        13


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                      ...+++..|++++|.+|.|+..++.|.+|....
T Consensus       277 ~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~~  309 (323)
T KOG0594|consen  277 DGIELLSKLLQYDPAKRISAKGALTHPYFSELP  309 (323)
T ss_pred             cHHHHHHHHhccCcccCcCHHHHhcChhhcccc
Confidence            568899999999999999999999999987643

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=99.89  E-value=5.2e-24  Score=177.91  Aligned_cols=142  Identities=22%  Similarity=0.147  Sum_probs=104.4

Q ss_pred             eee-ecCCCCCCeeeCCCCcEEEeccccccccCC---------------C-------CCC--------------------
Q 045790            4 VAY-SRSPELPPGRGDFNFNAKLGDFGLARLMDH---------------E-------LGP--------------------   40 (231)
Q Consensus         4 ~~~-~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~---------------~-------~~~--------------------   40 (231)
                      -|| ||||||+|+|||..|++||+|||+|..+..               .       ...                    
T Consensus       260 ~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~  339 (550)
T KOG0605|consen  260 LGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKR  339 (550)
T ss_pred             cCcccccCChhheeecCCCCEeeccccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHh
Confidence            366 999999999999999999999999854321               0       000                    


Q ss_pred             ----ceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCccccchhhhhhhhccccCCCCCCcccccccccc
Q 045790           41 ----KTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEG  116 (231)
Q Consensus        41 ----~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  116 (231)
                          .....+||+-|+|||++.+..|...+|.||+||+++|++.|.+||.+..+.                         
T Consensus       340 nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~-------------------------  394 (550)
T KOG0605|consen  340 NRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGCIMYEMLVGYPPFCSETPQ-------------------------  394 (550)
T ss_pred             hhhhhhhcccCCccccchHHHhcCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH-------------------------
Confidence                012357999999999999999999999999999999999999999887654                         


Q ss_pred             chhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHHHHHHHhhcCCCCCCCC---CHHHHHHHHhcc
Q 045790          117 EKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCLLIVGLWCAHPDRCFRP---SIRQAIQVLNFE  193 (231)
Q Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~c~~~dp~~Rp---s~~ell~~l~~~  193 (231)
                                ..+..+..|-..+....              ......+..+|+.+|+- ||++|.   .+.||-.|++|.
T Consensus       395 ----------~T~rkI~nwr~~l~fP~--------------~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF~  449 (550)
T KOG0605|consen  395 ----------ETYRKIVNWRETLKFPE--------------EVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKHPFFK  449 (550)
T ss_pred             ----------HHHHHHHHHhhhccCCC--------------cCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcCCccc
Confidence                      33344555543222111              11112445666777776 999997   599999999995


Q ss_pred             cC
Q 045790          194 TT  195 (231)
Q Consensus       194 ~~  195 (231)
                      ..
T Consensus       450 ~v  451 (550)
T KOG0605|consen  450 GV  451 (550)
T ss_pred             cC
Confidence            54

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.89  E-value=4e-23  Score=175.05  Aligned_cols=82  Identities=23%  Similarity=0.188  Sum_probs=68.9

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+|||++.++.+||+|||+++..............|+..|+|||++.+..++.++||||+||++|++++|..||
T Consensus       204 vHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~  283 (391)
T PHA03212        204 IHRDIKAENIFINHPGDVCLGDFGAACFPVDINANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSL  283 (391)
T ss_pred             ccCCCChHhEEEcCCCCEEEEeCCcccccccccccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCc
Confidence            59999999999999999999999998654322222233457899999999998888999999999999999999999877


Q ss_pred             cc
Q 045790           86 NR   87 (231)
Q Consensus        86 ~~   87 (231)
                      ..
T Consensus       284 ~~  285 (391)
T PHA03212        284 FE  285 (391)
T ss_pred             CC
Confidence            53

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=99.89  E-value=2.3e-23  Score=164.11  Aligned_cols=184  Identities=19%  Similarity=0.125  Sum_probs=127.7

Q ss_pred             eeecCCCCCCeeeCCC----CcEEEeccccccccCCCCCC--ceeEeeccccccchhhhhhCC-CCCCcccHhHHHHHHH
Q 045790            5 AYSRSPELPPGRGDFN----FNAKLGDFGLARLMDHELGP--KTIMLVGTLAYMASEYISTGR-VSKELDVFSFRVVALE   77 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~----~~~kl~Dfg~~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~-~~~~~Dv~s~G~vl~e   77 (231)
                      ..||||||.|||+..+    |.+||+|||+++.+...-..  .....+.|.+|+|||.+.+.. |+.+.|+|++||++.|
T Consensus       153 vlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaE  232 (438)
T KOG0666|consen  153 VLHRDLKPANILVMGDGPERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAE  232 (438)
T ss_pred             eeeccCCcceEEEeccCCccCeeEeecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHH
Confidence            4699999999999866    89999999999987543222  233456789999999998865 9999999999999999


Q ss_pred             HHhCCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhH-HHHHHHhhcchhhhhhcccccCc
Q 045790           78 IATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLV-AWVWDLYGERKLLSAANERLDSR  156 (231)
Q Consensus        78 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~  156 (231)
                      |++-++.|.....+ +...- .-......+..+.++-+..++|+............ ++-.+.+..-.+..+.+..-..+
T Consensus       233 lLtl~PlF~g~E~k-~~~~~-Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~  310 (438)
T KOG0666|consen  233 LLTLEPLFKGREEK-IKTKN-PFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKD  310 (438)
T ss_pred             HHccCccccchhhh-cccCC-CchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCC
Confidence            99999988765432 11100 11111233456777778888888877666553333 33333333323333333221111


Q ss_pred             ccHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          157 FDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       157 ~~~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                            ...++|+..+++.||-+|.|+.++++|.+|....
T Consensus       311 ------~~a~~LL~klL~yDP~kRIta~qAleh~yF~~d~  344 (438)
T KOG0666|consen  311 ------PSALDLLQKLLTYDPIKRITAEQALEHPYFTEDP  344 (438)
T ss_pred             ------chHHHHHHHHhccCchhhccHHHHhcccccccCC
Confidence                  1247788899999999999999999999997664

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=99.89  E-value=2.6e-23  Score=161.31  Aligned_cols=137  Identities=21%  Similarity=0.182  Sum_probs=102.6

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhh---CCCCCCcccHhHHHHHHHHHhC
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIST---GRVSKELDVFSFRVVALEIATG   81 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~---~~~~~~~Dv~s~G~vl~el~~g   81 (231)
                      ..|||+||+|||+|..|.+|++|||.+-.+-+...  .....|.+.|||||.+.-   ..|+.++||||+|+.++|+.||
T Consensus       213 viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkA--htrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg  290 (391)
T KOG0983|consen  213 VIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKA--HTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATG  290 (391)
T ss_pred             eeecccCccceEEccCCCEEeecccccceeecccc--cccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcc
Confidence            46999999999999999999999999977654332  244578999999999843   3488899999999999999999


Q ss_pred             CCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHH
Q 045790           82 RKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQ  161 (231)
Q Consensus        82 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  161 (231)
                      +.||..-..                                        ++.. +..+..++      .|.|++.  ...
T Consensus       291 ~yPy~~c~t----------------------------------------dFe~-ltkvln~e------PP~L~~~--~gF  321 (391)
T KOG0983|consen  291 QYPYKGCKT----------------------------------------DFEV-LTKVLNEE------PPLLPGH--MGF  321 (391)
T ss_pred             cCCCCCCCc----------------------------------------cHHH-HHHHHhcC------CCCCCcc--cCc
Confidence            999976432                                        1111 11111111      1233221  124


Q ss_pred             HHHHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          162 MTCLLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       162 ~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      ...|.+++..||+.|+.+||.-.+|++|..-
T Consensus       322 Sp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi  352 (391)
T KOG0983|consen  322 SPDFQSFVKDCLTKDHRKRPKYNKLLEHPFI  352 (391)
T ss_pred             CHHHHHHHHHHhhcCcccCcchHHHhcCcce
Confidence            5678899999999999999999999999754

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.89  E-value=6.8e-23  Score=171.49  Aligned_cols=148  Identities=20%  Similarity=0.143  Sum_probs=102.7

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhh-----CCCCCCcccHhHHHHHHHHHh
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIST-----GRVSKELDVFSFRVVALEIAT   80 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-----~~~~~~~Dv~s~G~vl~el~~   80 (231)
                      .|||||++|||++.++.+||+|||+++...... .......|+..|++||.+..     ...+.++|||||||++|++++
T Consensus       190 vHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~  268 (353)
T PLN00034        190 VHRDIKPSNLLINSAKNVKIADFGVSRILAQTM-DPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYL  268 (353)
T ss_pred             eecCCCHHHEEEcCCCCEEEcccccceeccccc-ccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHh
Confidence            599999999999999999999999987654321 11234578999999998742     123468999999999999999


Q ss_pred             CCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHH
Q 045790           81 GRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQ  160 (231)
Q Consensus        81 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  160 (231)
                      |+.||.....                                       ............          .........
T Consensus       269 g~~pf~~~~~---------------------------------------~~~~~~~~~~~~----------~~~~~~~~~  299 (353)
T PLN00034        269 GRFPFGVGRQ---------------------------------------GDWASLMCAICM----------SQPPEAPAT  299 (353)
T ss_pred             CCCCCCCCCC---------------------------------------ccHHHHHHHHhc----------cCCCCCCCc
Confidence            9999962210                                       001110000000          000011112


Q ss_pred             HHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCCCCCCCCC
Q 045790          161 QMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTMPNLPSKM  203 (231)
Q Consensus       161 ~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~~~~~~~~  203 (231)
                      ....+.+++.+||+.||++|||+.||++|.++....+......
T Consensus       300 ~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~~~~~~~~~~  342 (353)
T PLN00034        300 ASREFRHFISCCLQREPAKRWSAMQLLQHPFILRAQPGQGQGG  342 (353)
T ss_pred             cCHHHHHHHHHHccCChhhCcCHHHHhcCcccccCCcccccCC
Confidence            2345788999999999999999999999999988765544333

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.88  E-value=4.5e-23  Score=171.42  Aligned_cols=137  Identities=23%  Similarity=0.176  Sum_probs=97.5

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCC-ceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGP-KTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~   83 (231)
                      .||||||.|||++.++.+||+|||+++........ ......++..|+|||++.+..++.++||||+|+++|++++ |..
T Consensus       196 vHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~  275 (338)
T cd05102         196 IHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGAS  275 (338)
T ss_pred             ECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCC
Confidence            59999999999999999999999998765322111 1122345578999999988889999999999999999997 999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||......                                      .   ....... ....     ..    .+.....
T Consensus       276 pf~~~~~~--------------------------------------~---~~~~~~~-~~~~-----~~----~~~~~~~  304 (338)
T cd05102         276 PYPGVQIN--------------------------------------E---EFCQRLK-DGTR-----MR----APENATP  304 (338)
T ss_pred             CCCCCCcc--------------------------------------H---HHHHHHh-cCCC-----CC----CCCCCCH
Confidence            98643210                                      0   0000000 0000     00    0111234


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhcc
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNFE  193 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~~  193 (231)
                      .+.+++.+||+.||++|||+.+|++.|+..
T Consensus       305 ~l~~li~~cl~~dp~~RPs~~el~~~l~~~  334 (338)
T cd05102         305 EIYRIMLACWQGDPKERPTFSALVEILGDL  334 (338)
T ss_pred             HHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            577899999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=99.88  E-value=1.6e-23  Score=162.48  Aligned_cols=141  Identities=22%  Similarity=0.151  Sum_probs=103.9

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhh------CCCCCCcccHhHHHHHHHHH
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIST------GRVSKELDVFSFRVVALEIA   79 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~------~~~~~~~Dv~s~G~vl~el~   79 (231)
                      .||||||.|||+|.|..+||+|||++..+..+  ......+||++|.|||++..      -.|+..+|.|++|++++.++
T Consensus       145 VHRDLKpENILlddn~~i~isDFGFa~~l~~G--ekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLL  222 (411)
T KOG0599|consen  145 VHRDLKPENILLDDNMNIKISDFGFACQLEPG--EKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLL  222 (411)
T ss_pred             hhcccChhheeeccccceEEeccceeeccCCc--hhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHH
Confidence            49999999999999999999999999887643  34556799999999999852      24788899999999999999


Q ss_pred             hCCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccH
Q 045790           80 TGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDE  159 (231)
Q Consensus        80 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  159 (231)
                      .|.+||.....--.+.-|+                                           +++.+      ++...=.
T Consensus       223 aGcpPFwHRkQmlMLR~Im-------------------------------------------eGkyq------F~speWa  253 (411)
T KOG0599|consen  223 AGCPPFWHRKQMLMLRMIM-------------------------------------------EGKYQ------FRSPEWA  253 (411)
T ss_pred             cCCCchhHHHHHHHHHHHH-------------------------------------------hcccc------cCCcchh
Confidence            9999998654211111111                                           01000      0000001


Q ss_pred             HHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCCC
Q 045790          160 QQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTMP  197 (231)
Q Consensus       160 ~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~~  197 (231)
                      +-.....+|+.+|++-||.+|.|++|+++|++|++...
T Consensus       254 dis~~~KdLIsrlLqVdp~~Ritake~LaHpff~q~~~  291 (411)
T KOG0599|consen  254 DISATVKDLISRLLQVDPTKRITAKEALAHPFFIQIAQ  291 (411)
T ss_pred             hccccHHHHHHHHHeeCchhcccHHHHhcChHHHHHHH
Confidence            12334577899999999999999999999999955443

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=99.88  E-value=2.2e-23  Score=167.37  Aligned_cols=85  Identities=26%  Similarity=0.239  Sum_probs=74.5

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+|||+|..|.++|+|||+|+..-. ......+.+||+-|||||++....++.++|.||+|+++|+|++|.+||
T Consensus       147 iyRDlKPENILLd~~GHi~LtDFgL~k~~~~-~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF  225 (357)
T KOG0598|consen  147 IYRDLKPENILLDEQGHIKLTDFGLCKEDLK-DGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPF  225 (357)
T ss_pred             eeccCCHHHeeecCCCcEEEeccccchhccc-CCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCC
Confidence            4999999999999999999999999985432 222345689999999999999999999999999999999999999999


Q ss_pred             ccchhh
Q 045790           86 NRYKAQ   91 (231)
Q Consensus        86 ~~~~~~   91 (231)
                      ...+..
T Consensus       226 ~~~~~~  231 (357)
T KOG0598|consen  226 YAEDVK  231 (357)
T ss_pred             cCccHH
Confidence            876643

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.88  E-value=8.9e-23  Score=169.33  Aligned_cols=179  Identities=17%  Similarity=0.166  Sum_probs=107.9

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCc
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      -+||||||+||+++.++.+||+|||++......   ......|+..|+|||++.+..++.++||||+||+++++++|+.|
T Consensus       125 ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p  201 (331)
T cd06649         125 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYP  201 (331)
T ss_pred             EEcCCCChhhEEEcCCCcEEEccCccccccccc---ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCC
Confidence            359999999999999999999999998765322   12334688899999999888899999999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCcccccc---ccccchhhcc-CCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKL---GVEGEKAVLG-GSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQ  160 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  160 (231)
                      |...........+...............   .........+ +.................. .     ..+...   ...
T Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~---~~~  272 (331)
T cd06649         202 IPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVN-E-----PPPKLP---NGV  272 (331)
T ss_pred             CCCCCHHHHHHHhcccccccccCCccccCcccccccccccccccccccchhHHHHHHHHHh-C-----CCcCCC---Ccc
Confidence            9765543332222211110000000000   0000000000 0000000011111110000 0     001110   011


Q ss_pred             HHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccC
Q 045790          161 QMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETT  195 (231)
Q Consensus       161 ~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~  195 (231)
                      ....+.+|+.+||+.||++|||+.+|++|+++...
T Consensus       273 ~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~  307 (331)
T cd06649         273 FTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRS  307 (331)
T ss_pred             ccHHHHHHHHHHccCCcccCCCHHHHhcChHHhhc
Confidence            23457889999999999999999999999998653

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.88  E-value=2.1e-23  Score=179.25  Aligned_cols=164  Identities=15%  Similarity=0.126  Sum_probs=104.3

Q ss_pred             eecCCCCCCeeeCCCC-cEEEeccccccccCCCCCCceeEeeccccccchhhhhhC-CCCCCcccHhHHHHHHHHHhCCC
Q 045790            6 YSRSPELPPGRGDFNF-NAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTG-RVSKELDVFSFRVVALEIATGRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~-~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~el~~g~~   83 (231)
                      .||||||+|||++.++ .+||+|||+++.+....  ......|+..|+|||++.+. .++.++||||+||++++|++|..
T Consensus       192 iHrDLKp~NILl~~~~~~vkL~DFGla~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~  269 (440)
T PTZ00036        192 CHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQ--RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYP  269 (440)
T ss_pred             ecCCcCHHHEEEcCCCCceeeeccccchhccCCC--CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCC
Confidence            4999999999999654 69999999998654322  12335678899999998664 58899999999999999999999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||......+....+.............           ...     ..        +..-.........+...++.....
T Consensus       270 pf~~~~~~~~~~~i~~~~~~p~~~~~~-----------~~~-----~~--------~~~~~~~~~~~~~l~~~~p~~~~~  325 (440)
T PTZ00036        270 IFSGQSSVDQLVRIIQVLGTPTEDQLK-----------EMN-----PN--------YADIKFPDVKPKDLKKVFPKGTPD  325 (440)
T ss_pred             CCCCCChHHHHHHHHHHhCCCCHHHHH-----------Hhc-----hh--------hhcccCCccCchhHHHHhccCCCH
Confidence            998765443333332211111100000           000     00        000000000000011111111234


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhcccC
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNFETT  195 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~  195 (231)
                      .+.+|+.+||+.||.+|||+.|+++|+++...
T Consensus       326 ~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~  357 (440)
T PTZ00036        326 DAINFISQFLKYEPLKRLNPIEALADPFFDDL  357 (440)
T ss_pred             HHHHHHHHHCCCChhHCcCHHHHhCChhHHhh
Confidence            57789999999999999999999999998543

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.88  E-value=5.3e-23  Score=172.19  Aligned_cols=172  Identities=17%  Similarity=0.059  Sum_probs=107.4

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+||+++.++.+||+|||+++.....  .......|+..|+|||++.+..++.++||||+||++++|++|+.||
T Consensus       141 vHrDikp~Nill~~~~~~kl~Dfg~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf  218 (355)
T cd07874         141 IHRDLKPSNIVVKSDCTLKILDFGLARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF  218 (355)
T ss_pred             ccCCCChHHEEECCCCCEEEeeCcccccCCCc--cccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence            59999999999999999999999999765432  1223356788999999998888999999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcch--hhhhhcccc---cCcccHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERK--LLSAANERL---DSRFDEQ  160 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l---~~~~~~~  160 (231)
                      ..........................+                ......+.........  ........+   .......
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (355)
T cd07874         219 PGRDYIDQWNKVIEQLGTPCPEFMKKL----------------QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKL  282 (355)
T ss_pred             CCCCHHHHHHHHHHHhCCCCHHHHHhh----------------cHHHHHHHhcCCccccccchhhccccccccccccccc
Confidence            765543332222221111111000000                0000011100000000  000000000   0001111


Q ss_pred             HHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccC
Q 045790          161 QMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETT  195 (231)
Q Consensus       161 ~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~  195 (231)
                      ....+.+++.+|++.||++|||+.|+++|+++...
T Consensus       283 ~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~~~  317 (355)
T cd07874         283 KASQARDLLSKMLVIDPAKRISVDEALQHPYINVW  317 (355)
T ss_pred             cchHHHHHHHHHhcCCchhcCCHHHHhcCcchhcc
Confidence            23456789999999999999999999999988643

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.88  E-value=1.4e-22  Score=169.86  Aligned_cols=167  Identities=16%  Similarity=0.069  Sum_probs=105.1

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+||+++.++.+||+|||+++.....  .......|+..|+|||.+.+..++.++||||+||++|+|++|+.||
T Consensus       145 vHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf  222 (359)
T cd07876         145 IHRDLKPSNIVVKSDCTLKILDFGLARTACTN--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIF  222 (359)
T ss_pred             ccCCCCHHHEEECCCCCEEEecCCCccccccC--ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCC
Confidence            59999999999999999999999998754322  1123346788999999998888999999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcc------hhhhhhcccc---cCc
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGER------KLLSAANERL---DSR  156 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l---~~~  156 (231)
                      ...........+............                    ..+...+.......      ..........   ...
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (359)
T cd07876         223 QGTDHIDQWNKVIEQLGTPSAEFM--------------------NRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESE  282 (359)
T ss_pred             CCCCHHHHHHHHHHhcCCCcHHHH--------------------HHHHHHHHHHHhhCCCCCCcchhhhccccccccccc
Confidence            765433222222211111100000                    00000000000000      0000000000   000


Q ss_pred             ccHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          157 FDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       157 ~~~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      ........+.+++.+||+.||++|||+.|+++|+++..
T Consensus       283 ~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~  320 (359)
T cd07876         283 RDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYITV  320 (359)
T ss_pred             cccccchhHHHHHHHHhccCcccCCCHHHHhcCchhhh
Confidence            11112345678999999999999999999999998864

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.88  E-value=3.7e-23  Score=173.38  Aligned_cols=141  Identities=21%  Similarity=0.195  Sum_probs=105.7

Q ss_pred             eeeeecCCCCCCeeeCCCCcEEEeccccccccCCCCCC-ceeEeeccccccchhhhhhC-----------CCCCCcccHh
Q 045790            3 EVAYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGP-KTIMLVGTLAYMASEYISTG-----------RVSKELDVFS   70 (231)
Q Consensus         3 ~~~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~-----------~~~~~~Dv~s   70 (231)
                      |.-.|-||||.|+|+- .|.+||+|||.+..+...... ....++||..||+||.+...           .++.++||||
T Consensus       479 ~gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWS  557 (677)
T KOG0596|consen  479 HGIVHSDLKPANFLLV-KGRLKLIDFGIANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWS  557 (677)
T ss_pred             hceeecCCCcccEEEE-eeeEEeeeechhcccCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhh
Confidence            3456999999999876 578999999999887654333 35678999999999998432           1567899999


Q ss_pred             HHHHHHHHHhCCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhc
Q 045790           71 FRVVALEIATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAAN  150 (231)
Q Consensus        71 ~G~vl~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (231)
                      +||++|+|+.|+.||......                                           |       .++..+.+
T Consensus       558 LGCILYqMvYgktPf~~~~n~-------------------------------------------~-------aKl~aI~~  587 (677)
T KOG0596|consen  558 LGCILYQMVYGKTPFGQIINQ-------------------------------------------I-------AKLHAITD  587 (677)
T ss_pred             hhhHHHHHHhcCCchHHHHHH-------------------------------------------H-------HHHHhhcC
Confidence            999999999999999754311                                           1       23444555


Q ss_pred             ccccCcccHH-HHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          151 ERLDSRFDEQ-QMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       151 ~~l~~~~~~~-~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      |...-.++.- .-..++++|+.||++||.+|||..+||+|+.-..
T Consensus       588 P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqhpFl~~  632 (677)
T KOG0596|consen  588 PNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQHPFLQI  632 (677)
T ss_pred             CCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcCccccc
Confidence            5443333321 1222889999999999999999999999987544

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.88  E-value=3.1e-23  Score=181.44  Aligned_cols=138  Identities=24%  Similarity=0.228  Sum_probs=107.9

Q ss_pred             ecCCCCCCeeeCCCCcEEEeccccccccCCCCCCcee-EeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCCc
Q 045790            7 SRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTI-MLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRKV   84 (231)
Q Consensus         7 ~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~-~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~p   84 (231)
                      ||||..+|+||.++..+||+|||+++-.-........ ...-.++||+||.+..+.|+.++||||||+++||+++ |+.|
T Consensus       626 HRDLATRNCLVge~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QP  705 (774)
T KOG1026|consen  626 HRDLATRNCLVGENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQP  705 (774)
T ss_pred             ccchhhhhceeccceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCc
Confidence            9999999999999999999999999865433333221 2234668999999999999999999999999999996 9999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      +.+...++                                       ..+++            .+-.+ -..++.+...
T Consensus       706 y~glSn~E---------------------------------------VIe~i------------~~g~l-L~~Pe~CP~~  733 (774)
T KOG1026|consen  706 YYGLSNQE---------------------------------------VIECI------------RAGQL-LSCPENCPTE  733 (774)
T ss_pred             ccccchHH---------------------------------------HHHHH------------HcCCc-ccCCCCCCHH
Confidence            98765331                                       11111            11222 3455667788


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                      +..||.+||+.+|.+||+++||...|......
T Consensus       734 vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~  765 (774)
T KOG1026|consen  734 VYSLMLECWNENPKRRPSFKEIHSRLQAWAQA  765 (774)
T ss_pred             HHHHHHHHhhcCcccCCCHHHHHHHHHHHHhc
Confidence            99999999999999999999999999875543

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.88  E-value=4.5e-23  Score=167.81  Aligned_cols=163  Identities=17%  Similarity=0.052  Sum_probs=103.2

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhh-CCCCCCcccHhHHHHHHHHHhCCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIST-GRVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      .||||||+||+++.++.+||+|||+++...... .......++..|+|||.+.+ ..++.++|+||+||+++++++|+.|
T Consensus       125 vH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~p  203 (288)
T cd07871         125 LHRDLKPQNLLINEKGELKLADFGLARAKSVPT-KTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPM  203 (288)
T ss_pred             ccCCCCHHHEEECCCCCEEECcCcceeeccCCC-ccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCC
Confidence            599999999999999999999999987643221 11233467889999999865 4578899999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |......+....+...........+           .+..      ....+..............+.  ..    .....
T Consensus       204 f~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~------~~~~~~~~~~~~~~~~~~~~~--~~----~~~~~  260 (288)
T cd07871         204 FPGSTVKEELHLIFRLLGTPTEETW-----------PGIT------SNEEFRSYLFPQYRAQPLINH--AP----RLDTD  260 (288)
T ss_pred             CCCCCHHHHHHHHHHHhCCCChHHh-----------hccc------cchhhhccccCccCCCchHHh--CC----CCCHH
Confidence            9876554443333322211111110           0000      000000000000000000000  00    11234


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      ..+++.+|++.||.+|||+.|+++|++|
T Consensus       261 ~~dll~~mL~~dp~~R~t~~~~l~hp~f  288 (288)
T cd07871         261 GIDLLSSLLLYETKSRISAEAALRHSYF  288 (288)
T ss_pred             HHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence            5789999999999999999999999875

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.88  E-value=8.5e-23  Score=169.53  Aligned_cols=169  Identities=15%  Similarity=0.125  Sum_probs=103.2

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCC--ceeEeeccccccchhhhhh--CCCCCCcccHhHHHHHHHHHhC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGP--KTIMLVGTLAYMASEYIST--GRVSKELDVFSFRVVALEIATG   81 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~--~~~~~~~Dv~s~G~vl~el~~g   81 (231)
                      +||||||+|||++.++.+||+|||+++........  ......|+..|+|||++.+  ..++.++||||+||+++++++|
T Consensus       125 vH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg  204 (338)
T cd07859         125 FHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTG  204 (338)
T ss_pred             ecCCCCHHHeEECCCCcEEEccCccccccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcC
Confidence            59999999999999999999999998754321111  1233568899999999865  5688899999999999999999


Q ss_pred             CCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHH
Q 045790           82 RKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQ  161 (231)
Q Consensus        82 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  161 (231)
                      +.||...........+.............           ...    ............      ......+...+ ...
T Consensus       205 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~-----------~i~----~~~~~~~~~~~~------~~~~~~~~~~~-~~~  262 (338)
T cd07859         205 KPLFPGKNVVHQLDLITDLLGTPSPETIS-----------RVR----NEKARRYLSSMR------KKQPVPFSQKF-PNA  262 (338)
T ss_pred             CCCCCCCChHHHHHHHHHHhCCCCHHHHH-----------Hhh----hhhHHHHHHhhc------ccCCCchHHhc-CCC
Confidence            99997654322211111100000000000           000    000000000000      00000000000 001


Q ss_pred             HHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          162 MTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       162 ~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                      ...+.+++.+||+.||++|||+.++++|+++....
T Consensus       263 ~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~~  297 (338)
T cd07859         263 DPLALRLLERLLAFDPKDRPTAEEALADPYFKGLA  297 (338)
T ss_pred             ChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhcC
Confidence            23467899999999999999999999999986533

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.88  E-value=6.3e-23  Score=178.62  Aligned_cols=136  Identities=18%  Similarity=0.153  Sum_probs=100.8

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCC-ceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGP-KTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      .||||||+|||++.++.+||+|||+++.+...... ......|+..|+|||++.+..++.++||||+|+++|++++|+.|
T Consensus       165 iHrDLKP~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~P  244 (496)
T PTZ00283        165 IHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRP  244 (496)
T ss_pred             ecCCCCHHHEEEeCCCCEEEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCC
Confidence            59999999999999999999999999765432111 12345789999999999888899999999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |.......                                          .+...... .    . ..    .+......
T Consensus       245 f~~~~~~~------------------------------------------~~~~~~~~-~----~-~~----~~~~~~~~  272 (496)
T PTZ00283        245 FDGENMEE------------------------------------------VMHKTLAG-R----Y-DP----LPPSISPE  272 (496)
T ss_pred             CCCCCHHH------------------------------------------HHHHHhcC-C----C-CC----CCCCCCHH
Confidence            96543211                                          11111100 0    0 00    11112345


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhcc
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNFE  193 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~~  193 (231)
                      +..++..||+.||++||++.++++|+.+.
T Consensus       273 l~~li~~~L~~dP~~RPs~~ell~~p~~~  301 (496)
T PTZ00283        273 MQEIVTALLSSDPKRRPSSSKLLNMPICK  301 (496)
T ss_pred             HHHHHHHHcccChhhCcCHHHHHhCHHHH
Confidence            77899999999999999999999987653

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.88  E-value=1e-22  Score=173.97  Aligned_cols=140  Identities=17%  Similarity=0.110  Sum_probs=106.3

Q ss_pred             ecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCC-CCCcccHhHHHHHHHHHhCCCcc
Q 045790            7 SRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRV-SKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         7 ~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      |||+||+|+|+|.+..+||+|||++.....  .....+.||++.|.+||++.+.+| ..++||||+|++++.|++|+.||
T Consensus       135 HRDLKpENlLLd~~~nIKIADFGMAsLe~~--gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPF  212 (786)
T KOG0588|consen  135 HRDLKPENLLLDVKNNIKIADFGMASLEVP--GKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPF  212 (786)
T ss_pred             eccCCchhhhhhcccCEeeeccceeecccC--CccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCC
Confidence            999999999999988899999999976433  344677899999999999999987 57799999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      ++.+..                                          ..+.++..+.     ++      .+..-..+.
T Consensus       213 dDdNir------------------------------------------~LLlKV~~G~-----f~------MPs~Is~ea  239 (786)
T KOG0588|consen  213 DDDNIR------------------------------------------VLLLKVQRGV-----FE------MPSNISSEA  239 (786)
T ss_pred             CCccHH------------------------------------------HHHHHHHcCc-----cc------CCCcCCHHH
Confidence            864422                                          2222111111     00      011122334


Q ss_pred             HHHHHhhcCCCCCCCCCHHHHHHHHhcccCCCCCCC
Q 045790          166 LIVGLWCAHPDRCFRPSIRQAIQVLNFETTMPNLPS  201 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~~~~~~  201 (231)
                      -+|+.+|+.-||+.|.|+.||+.|++-.+..-.+..
T Consensus       240 QdLLr~ml~VDp~~RiT~~eI~kHP~l~g~~~~~~~  275 (786)
T KOG0588|consen  240 QDLLRRMLDVDPSTRITTEEILKHPFLSGYTSLPSS  275 (786)
T ss_pred             HHHHHHHhccCccccccHHHHhhCchhhcCCCCChh
Confidence            567889999999999999999999998766644444

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.88  E-value=1.4e-22  Score=170.22  Aligned_cols=171  Identities=18%  Similarity=0.076  Sum_probs=107.6

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+||+++.++.+||+|||+++.....  .......++..|+|||++.+..++.++||||+||++++|++|+.||
T Consensus       148 vH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf  225 (364)
T cd07875         148 IHRDLKPSNIVVKSDCTLKILDFGLARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF  225 (364)
T ss_pred             ecCCCCHHHEEECCCCcEEEEeCCCccccCCC--CcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCC
Confidence            59999999999999999999999999765432  1123356788999999998888999999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcc--hhhhhhcccc---cCcccHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGER--KLLSAANERL---DSRFDEQ  160 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l---~~~~~~~  160 (231)
                      ...........+..............+                ...+..+........  .........+   .......
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (364)
T cd07875         226 PGTDHIDQWNKVIEQLGTPCPEFMKKL----------------QPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKL  289 (364)
T ss_pred             CCCCHHHHHHHHHHhcCCCCHHHHHhh----------------hHHHHHHHhhCCCcCCCChHhhCcccccccccccccc
Confidence            776544333333221111111000000                000000000000000  0000000000   0001111


Q ss_pred             HHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          161 QMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       161 ~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      ....+.+++.+|++.||++|||+.++++|+++..
T Consensus       290 ~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~~  323 (364)
T cd07875         290 KASQARDLLSKMLVIDASKRISVDEALQHPYINV  323 (364)
T ss_pred             ccHHHHHHHHHhcCcCcccCCCHHHHhcCccccc
Confidence            2345678999999999999999999999999853

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.87  E-value=1.5e-22  Score=163.90  Aligned_cols=135  Identities=20%  Similarity=0.188  Sum_probs=99.1

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCC-ceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGP-KTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~   83 (231)
                      .||||||+||+++.++.++|+|||++......... ......++..|+|||.+.+..++.++||||+|++++++++ |..
T Consensus       146 ~H~dlkp~Nil~~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~  225 (283)
T cd05048         146 VHRDLAARNCLVGEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQ  225 (283)
T ss_pred             eccccccceEEEcCCCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCC
Confidence            59999999999999999999999998765322111 1122345678999999988889999999999999999997 999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||......+                                       +...+.    ..         .....+.....
T Consensus       226 p~~~~~~~~---------------------------------------~~~~i~----~~---------~~~~~~~~~~~  253 (283)
T cd05048         226 PYYGFSNQE---------------------------------------VIEMIR----SR---------QLLPCPEDCPA  253 (283)
T ss_pred             CCCCCCHHH---------------------------------------HHHHHH----cC---------CcCCCcccCCH
Confidence            986543221                                       111110    00         00111223346


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      .+.+++.+||+.||++||++.+|+++|..
T Consensus       254 ~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05048         254 RVYALMIECWNEIPARRPRFKDIHTRLRS  282 (283)
T ss_pred             HHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence            68899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.87  E-value=2e-22  Score=169.79  Aligned_cols=168  Identities=14%  Similarity=0.029  Sum_probs=106.3

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhC-CCCCCcccHhHHHHHHHHHhCCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTG-RVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      .||||||+|||++.++.+||+|||+++..............++..|+|||.+.+. .++.++||||+||++++|++|+.|
T Consensus       125 vH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~p  204 (372)
T cd07853         125 LHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRIL  204 (372)
T ss_pred             eCCCCChHHEEECCCCCEEeccccceeecccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCC
Confidence            5999999999999999999999999876543222222334578899999998764 478899999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHh-hcchhhhhhcccccCcccHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLY-GERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      |......+....+.............                    .......... ........... + .........
T Consensus       205 f~~~~~~~~~~~i~~~~g~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~  262 (372)
T cd07853         205 FQAQSPIQQLDLITDLLGTPSLEAMR--------------------SACEGARAHILRGPHKPPSLPV-L-YTLSSQATH  262 (372)
T ss_pred             CCCCCHHHHHHHHHHHcCCCCHHHHH--------------------HhhHHHHHHHHhCCCCCCchHH-h-cccCCCCCH
Confidence            98765444333332211111100000                    0000000000 00000000000 0 000111234


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhcccC
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNFETT  195 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~  195 (231)
                      .+.+++.+||+.||++|||+.++++|+++...
T Consensus       263 ~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~  294 (372)
T cd07853         263 EAVHLLCRMLVFDPDKRISAADALAHPYLDEG  294 (372)
T ss_pred             HHHHHHHHhCCCChhhCcCHHHHhcCHhhCCC
Confidence            57789999999999999999999999998664

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.87  E-value=6.4e-23  Score=169.67  Aligned_cols=135  Identities=20%  Similarity=0.187  Sum_probs=101.1

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+||+++.++.+||+|||+++..... ........|+..|+|||++.+..++.++||||+||++++|++|..||
T Consensus       117 vHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf  195 (323)
T cd05571         117 VYRDLKLENLMLDKDGHIKITDFGLCKEGISD-GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF  195 (323)
T ss_pred             EeCCCCHHHEEECCCCCEEEeeCCCCcccccC-CCcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCC
Confidence            59999999999999999999999998753221 12234467899999999998888999999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      ...........+.                                          . .      +..    ++......+
T Consensus       196 ~~~~~~~~~~~~~------------------------------------------~-~------~~~----~p~~~~~~~  222 (323)
T cd05571         196 YNQDHEKLFELIL------------------------------------------M-E------EIR----FPRTLSPEA  222 (323)
T ss_pred             CCCCHHHHHHHHH------------------------------------------c-C------CCC----CCCCCCHHH
Confidence            6543221111110                                          0 0      001    111123456


Q ss_pred             HHHHHhhcCCCCCCCC-----CHHHHHHHHhccc
Q 045790          166 LIVGLWCAHPDRCFRP-----SIRQAIQVLNFET  194 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rp-----s~~ell~~l~~~~  194 (231)
                      .+++.+||+.||++||     ++.++++|.++..
T Consensus       223 ~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~  256 (323)
T cd05571         223 KSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFAS  256 (323)
T ss_pred             HHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcCC
Confidence            7889999999999999     8999999999854

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.87  E-value=1e-22  Score=168.99  Aligned_cols=140  Identities=20%  Similarity=0.119  Sum_probs=100.3

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhC-CCCCCcccHhHHHHHHHHHhCCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTG-RVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      .||||||+|||++.++.+||+|||+++..............|+..|+|||++.+. .++.++||||+||+++++++|+.|
T Consensus       127 vHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~p  206 (332)
T cd05614         127 VYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASP  206 (332)
T ss_pred             EecCCCHHHeEECCCCCEEEeeCcCCccccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCC
Confidence            5999999999999999999999999876543322333446789999999998764 378889999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |......                                   .   ...........       .++.+..    .....
T Consensus       207 f~~~~~~-----------------------------------~---~~~~~~~~~~~-------~~~~~~~----~~~~~  237 (332)
T cd05614         207 FTLEGER-----------------------------------N---TQSEVSRRILK-------CDPPFPS----FIGPE  237 (332)
T ss_pred             CCCCCCC-----------------------------------C---CHHHHHHHHhc-------CCCCCCC----CCCHH
Confidence            9643210                                   0   00011111100       0111111    12234


Q ss_pred             HHHHHHhhcCCCCCCCC-----CHHHHHHHHhccc
Q 045790          165 LLIVGLWCAHPDRCFRP-----SIRQAIQVLNFET  194 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rp-----s~~ell~~l~~~~  194 (231)
                      +.+++.+||+.||++||     ++.++++|+++..
T Consensus       238 ~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~  272 (332)
T cd05614         238 AQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKG  272 (332)
T ss_pred             HHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCC
Confidence            67889999999999999     8899999998754

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.87  E-value=1.9e-22  Score=163.97  Aligned_cols=138  Identities=17%  Similarity=0.091  Sum_probs=100.8

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+|||++.++.++|+|||++.......  ......|+..|+|||++.+..++.++||||+||++|++++|+.||
T Consensus       124 iH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf  201 (285)
T cd05631         124 VYRDLKPENILLDDRGHIRISDLGLAVQIPEGE--TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPF  201 (285)
T ss_pred             EeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC--eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCC
Confidence            599999999999999999999999987654221  123356889999999998888999999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      ......                                       ....-+......        .  ...+.......+
T Consensus       202 ~~~~~~---------------------------------------~~~~~~~~~~~~--------~--~~~~~~~~s~~~  232 (285)
T cd05631         202 RKRKER---------------------------------------VKREEVDRRVKE--------D--QEEYSEKFSEDA  232 (285)
T ss_pred             CCCCcc---------------------------------------hhHHHHHHHhhc--------c--cccCCccCCHHH
Confidence            753210                                       000000000000        0  001111223456


Q ss_pred             HHHHHhhcCCCCCCCCC-----HHHHHHHHhccc
Q 045790          166 LIVGLWCAHPDRCFRPS-----IRQAIQVLNFET  194 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps-----~~ell~~l~~~~  194 (231)
                      ..|+.+||+.||++||+     +.++++|+++..
T Consensus       233 ~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~  266 (285)
T cd05631         233 KSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKN  266 (285)
T ss_pred             HHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcC
Confidence            78999999999999997     999999998855

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.87  E-value=1.4e-22  Score=173.58  Aligned_cols=135  Identities=16%  Similarity=0.144  Sum_probs=110.3

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .+||||.+|||+|..|.+||+|||+|+..- .....+.+++||+.|+|||++.+..|+.++|.|+||+++|||+.|..||
T Consensus       490 IYRDlKLdNiLLD~eGh~kiADFGlcKe~m-~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF  568 (694)
T KOG0694|consen  490 IYRDLKLDNLLLDTEGHVKIADFGLCKEGM-GQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPF  568 (694)
T ss_pred             eeeecchhheEEcccCcEEecccccccccC-CCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCC
Confidence            479999999999999999999999997532 2334568899999999999999999999999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      .+.+.+++...|+...+.                                                     ++.......
T Consensus       569 ~gddEee~FdsI~~d~~~-----------------------------------------------------yP~~ls~ea  595 (694)
T KOG0694|consen  569 PGDDEEEVFDSIVNDEVR-----------------------------------------------------YPRFLSKEA  595 (694)
T ss_pred             CCCCHHHHHHHHhcCCCC-----------------------------------------------------CCCcccHHH
Confidence            988877666666543332                                                     222334556


Q ss_pred             HHHHHhhcCCCCCCCCC-----HHHHHHHHhccc
Q 045790          166 LIVGLWCAHPDRCFRPS-----IRQAIQVLNFET  194 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps-----~~ell~~l~~~~  194 (231)
                      ..++.+.+..+|++|.-     +.+|.+|+-|..
T Consensus       596 ~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~  629 (694)
T KOG0694|consen  596 IAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRS  629 (694)
T ss_pred             HHHHHHHhccCcccccCCCCCCchhhhhCCcccc
Confidence            78899999999999985     478888887743

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.87  E-value=1.5e-22  Score=165.89  Aligned_cols=83  Identities=22%  Similarity=0.142  Sum_probs=67.6

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhC-CCCCCcccHhHHHHHHHHHhCCC
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTG-RVSKELDVFSFRVVALEIATGRK   83 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~el~~g~~   83 (231)
                      -.||||||+||+++.++.+||+|||++....... .......++..|+|||++.+. .++.++||||+||++++|++|..
T Consensus       124 ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~  202 (303)
T cd07869         124 ILHRDLKPQNLLISDTGELKLADFGLARAKSVPS-HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVA  202 (303)
T ss_pred             eecCCCCHHHEEECCCCCEEECCCCcceeccCCC-ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCC
Confidence            3599999999999999999999999987543211 112334678899999998654 47888999999999999999999


Q ss_pred             ccccc
Q 045790           84 VINRY   88 (231)
Q Consensus        84 p~~~~   88 (231)
                      ||...
T Consensus       203 pf~~~  207 (303)
T cd07869         203 AFPGM  207 (303)
T ss_pred             CCCCC
Confidence            99754

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.87  E-value=3e-22  Score=167.89  Aligned_cols=78  Identities=21%  Similarity=0.203  Sum_probs=64.7

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      +||||||+|||++.++.+||+|||+++.....  .......|+..|+|||++.+..++.++||||+||++|+++++..++
T Consensus       179 vHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~  256 (357)
T PHA03209        179 IHRDVKTENIFINDVDQVCIGDLGAAQFPVVA--PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI  256 (357)
T ss_pred             ecCCCCHHHEEECCCCCEEEecCccccccccC--cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence            59999999999999999999999998753221  1223456889999999998888999999999999999999865444

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.87  E-value=2.9e-22  Score=166.74  Aligned_cols=136  Identities=23%  Similarity=0.169  Sum_probs=97.6

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCc-eeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPK-TIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~   83 (231)
                      .||||||.||+++.++.++|+|||++..+....... .....++..|+|||++.+..++.++||||+||+++++++ |..
T Consensus       195 vHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~  274 (337)
T cd05054         195 IHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGAS  274 (337)
T ss_pred             ecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCC
Confidence            599999999999999999999999997653222111 122344568999999988889999999999999999997 999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||......                                      ..+.    ......         .....+.....
T Consensus       275 p~~~~~~~--------------------------------------~~~~----~~~~~~---------~~~~~~~~~~~  303 (337)
T cd05054         275 PYPGVQID--------------------------------------EEFC----RRLKEG---------TRMRAPEYATP  303 (337)
T ss_pred             CCCCCCcc--------------------------------------HHHH----HHHhcc---------CCCCCCccCCH
Confidence            98642210                                      0000    000000         00001112234


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      .+.+++.+||+.+|++||++.+|+++|..
T Consensus       304 ~~~~l~~~cl~~~p~~RPs~~ell~~l~~  332 (337)
T cd05054         304 EIYSIMLDCWHNNPEDRPTFSELVEILGD  332 (337)
T ss_pred             HHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence            57889999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.87  E-value=3.5e-22  Score=152.88  Aligned_cols=137  Identities=16%  Similarity=0.053  Sum_probs=105.0

Q ss_pred             eecCCCCCCeeeCC---CCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCC
Q 045790            6 YSRSPELPPGRGDF---NFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGR   82 (231)
Q Consensus         6 ~~rdlk~~nil~~~---~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~   82 (231)
                      .|||+||.|+++.+   ...+||+|||++..++.  ........|+++||+||+++..+|+..+|||++|++++-++.|.
T Consensus       132 vHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~--g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~  209 (355)
T KOG0033|consen  132 VHRDLKPENLLLASKAKGAAVKLADFGLAIEVND--GEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGY  209 (355)
T ss_pred             eeccCChhheeeeeccCCCceeecccceEEEeCC--ccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCC
Confidence            59999999999863   34589999999988763  33456689999999999999999999999999999999999999


Q ss_pred             CccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           83 KVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        83 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      .||.++....+.++|+...-..+                                             ++.-    ....
T Consensus       210 ~PF~~~~~~rlye~I~~g~yd~~---------------------------------------------~~~w----~~is  240 (355)
T KOG0033|consen  210 PPFWDEDQHRLYEQIKAGAYDYP---------------------------------------------SPEW----DTVT  240 (355)
T ss_pred             CCCCCccHHHHHHHHhccccCCC---------------------------------------------Cccc----CcCC
Confidence            99998766555554432111000                                             0000    0112


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHhcc
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLNFE  193 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~  193 (231)
                      .....|+++|+..||.+|.|+.|+++|+|..
T Consensus       241 ~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~  271 (355)
T KOG0033|consen  241 PEAKSLIRRMLTVNPKKRITADEALKHPWIC  271 (355)
T ss_pred             HHHHHHHHHHhccChhhhccHHHHhCCchhc
Confidence            3345688999999999999999999999863

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.87  E-value=1.2e-22  Score=165.02  Aligned_cols=157  Identities=18%  Similarity=0.072  Sum_probs=101.5

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCc
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      -.||||||+||+++.++.+||+|||++.......  ......++..|+|||++.+..++.++||||+||+++++++|.+|
T Consensus       129 ivH~dikp~Nili~~~~~~kl~dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~  206 (288)
T cd07863         129 IVHRDLKPENILVTSGGQVKLADFGLARIYSCQM--ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPL  206 (288)
T ss_pred             eecCCCCHHHEEECCCCCEEECccCccccccCcc--cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcC
Confidence            3599999999999999999999999987654321  12234678889999999888899999999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhccccc---CcccHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLD---SRFDEQQ  161 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~  161 (231)
                      |......+....+..........                          .|-....   .......+...   .......
T Consensus       207 f~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~---~~~~~~~~~~~~~~~~~~~~~  257 (288)
T cd07863         207 FCGNSEADQLGKIFDLIGLPPED--------------------------DWPRDVT---LPRGAFSPRGPRPVQSVVPEI  257 (288)
T ss_pred             cCCCCHHHHHHHHHHHhCCCChh--------------------------hCccccc---ccccccCCCCCCchHHhCcCc
Confidence            97654332222222110000000                          0000000   00000000000   0000011


Q ss_pred             HHHHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          162 MTCLLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       162 ~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      ...+.+++.+|++.||++|||+.+++.|++|
T Consensus       258 ~~~~~~li~~~L~~dP~~R~t~~~~l~hp~f  288 (288)
T cd07863         258 EESGAQLLLEMLTFNPHKRISAFRALQHPFF  288 (288)
T ss_pred             CHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence            2345788999999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=99.87  E-value=4.8e-22  Score=167.34  Aligned_cols=133  Identities=17%  Similarity=0.124  Sum_probs=106.4

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .|||+||+|||++.++.+|++|||+++.++.+. .......||+.|||||.+.+.+|+..+|.||+||++||++.|++||
T Consensus       122 lhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t-~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF  200 (808)
T KOG0597|consen  122 LHRDMKPQNILLEKGGTLKLCDFGLARAMSTNT-SVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPF  200 (808)
T ss_pred             ccccCCcceeeecCCCceeechhhhhhhcccCc-eeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCc
Confidence            599999999999999999999999999987543 3345678999999999999999999999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      ....-.                                          ..+..+..+        +.   ..+......|
T Consensus       201 ~a~si~------------------------------------------~Lv~~I~~d--------~v---~~p~~~S~~f  227 (808)
T KOG0597|consen  201 YARSIT------------------------------------------QLVKSILKD--------PV---KPPSTASSSF  227 (808)
T ss_pred             hHHHHH------------------------------------------HHHHHHhcC--------CC---CCcccccHHH
Confidence            754322                                          222222111        11   1222445677


Q ss_pred             HHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          166 LIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      ..++..-++.||.+|.|..+++.|+.-
T Consensus       228 ~nfl~gLL~kdP~~RltW~~Ll~HpF~  254 (808)
T KOG0597|consen  228 VNFLQGLLIKDPAQRLTWTDLLGHPFW  254 (808)
T ss_pred             HHHHHHHhhcChhhcccHHHHhcChHH
Confidence            888888999999999999999998754

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.87  E-value=3.3e-22  Score=165.85  Aligned_cols=132  Identities=17%  Similarity=0.137  Sum_probs=99.6

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+|||++.++.+||+|||+++.....    .....|++.|+|||++.+..++.++||||+||++|+|++|..||
T Consensus       140 vH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf  215 (329)
T PTZ00263        140 IYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR----TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPF  215 (329)
T ss_pred             eecCCCHHHEEECCCCCEEEeeccCceEcCCC----cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCC
Confidence            59999999999999999999999998765432    23457899999999998888899999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      ...........                                          ... ..      ..+    +......+
T Consensus       216 ~~~~~~~~~~~------------------------------------------i~~-~~------~~~----p~~~~~~~  242 (329)
T PTZ00263        216 FDDTPFRIYEK------------------------------------------ILA-GR------LKF----PNWFDGRA  242 (329)
T ss_pred             CCCCHHHHHHH------------------------------------------Hhc-CC------cCC----CCCCCHHH
Confidence            65432111111                                          000 00      000    00112345


Q ss_pred             HHHHHhhcCCCCCCCCC-----HHHHHHHHhccc
Q 045790          166 LIVGLWCAHPDRCFRPS-----IRQAIQVLNFET  194 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps-----~~ell~~l~~~~  194 (231)
                      .+++..||+.||.+|++     +.++++|+++..
T Consensus       243 ~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~  276 (329)
T PTZ00263        243 RDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHG  276 (329)
T ss_pred             HHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCC
Confidence            68999999999999997     799999999865

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.86  E-value=4.7e-22  Score=167.74  Aligned_cols=136  Identities=20%  Similarity=0.152  Sum_probs=96.5

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCc-eeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPK-TIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~   83 (231)
                      .||||||.|||++.++.+||+|||+++......... .....++..|+|||.+.+..++.++||||+|+++|++++ |..
T Consensus       236 vH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~  315 (375)
T cd05104         236 IHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSS  315 (375)
T ss_pred             eccCCchhhEEEECCCcEEEecCccceeccCcccccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCC
Confidence            599999999999999999999999987654322111 112234567999999988889999999999999999997 888


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||......                                      ..+..++..    .         .....+.....
T Consensus       316 p~~~~~~~--------------------------------------~~~~~~~~~----~---------~~~~~~~~~~~  344 (375)
T cd05104         316 PYPGMPVD--------------------------------------SKFYKMIKE----G---------YRMLSPECAPS  344 (375)
T ss_pred             CCCCCCch--------------------------------------HHHHHHHHh----C---------ccCCCCCCCCH
Confidence            88643211                                      011111110    0         00000011123


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      .+.+++.+||+.||++|||+.+|++.|+.
T Consensus       345 ~l~~li~~cl~~dP~~RPs~~eil~~l~~  373 (375)
T cd05104         345 EMYDIMKSCWDADPLKRPTFKQIVQLIEQ  373 (375)
T ss_pred             HHHHHHHHHccCChhHCcCHHHHHHHHHh
Confidence            57789999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.86  E-value=5.2e-22  Score=161.27  Aligned_cols=91  Identities=21%  Similarity=0.251  Sum_probs=78.2

Q ss_pred             eecCCCCCCeeeCCC------CcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHH
Q 045790            6 YSRSPELPPGRGDFN------FNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIA   79 (231)
Q Consensus         6 ~~rdlk~~nil~~~~------~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~   79 (231)
                      .||||||+|||++.+      -.+||+|||+++.+..+  .-..+.+|++.|||||++...+|+.|+|+||+|+++|+++
T Consensus       131 iHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~--~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l  208 (429)
T KOG0595|consen  131 IHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPG--SMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCL  208 (429)
T ss_pred             eeccCCcceEEeccCCCCCCCceEEecccchhhhCCch--hHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHH
Confidence            499999999999864      46899999999998643  2346689999999999999999999999999999999999


Q ss_pred             hCCCccccchhhhhhhhcc
Q 045790           80 TGRKVINRYKAQKLRTQFV   98 (231)
Q Consensus        80 ~g~~p~~~~~~~~~~~~~~   98 (231)
                      +|+.||......+++..+.
T Consensus       209 ~g~~Pf~a~t~~eL~~~~~  227 (429)
T KOG0595|consen  209 TGKPPFDAETPKELLLYIK  227 (429)
T ss_pred             hCCCCccccCHHHHHHHHh
Confidence            9999999877665555443

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.86  E-value=2.3e-22  Score=165.54  Aligned_cols=136  Identities=20%  Similarity=0.143  Sum_probs=100.7

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+||+++.++.+||+|||+++...... .......|+..|+|||++.+..++.++||||+||++++|++|..||
T Consensus       115 ~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf  193 (312)
T cd05585         115 IYRDLKPENILLDYQGHIALCDFGLCKLNMKDD-DKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPF  193 (312)
T ss_pred             EeCCCCHHHeEECCCCcEEEEECcccccCccCC-CccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCc
Confidence            599999999999999999999999987543211 2233457899999999998888999999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      .......                                          .........       ..    ++......+
T Consensus       194 ~~~~~~~------------------------------------------~~~~~~~~~-------~~----~~~~~~~~~  220 (312)
T cd05585         194 YDENVNE------------------------------------------MYRKILQEP-------LR----FPDGFDRDA  220 (312)
T ss_pred             CCCCHHH------------------------------------------HHHHHHcCC-------CC----CCCcCCHHH
Confidence            6543221                                          111111000       00    111122345


Q ss_pred             HHHHHhhcCCCCCCCC---CHHHHHHHHhcccC
Q 045790          166 LIVGLWCAHPDRCFRP---SIRQAIQVLNFETT  195 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rp---s~~ell~~l~~~~~  195 (231)
                      .+++.+||+.||++||   ++.++++|+++...
T Consensus       221 ~~li~~~L~~dp~~R~~~~~~~e~l~hp~~~~~  253 (312)
T cd05585         221 KDLLIGLLSRDPTRRLGYNGAQEIKNHPFFSQL  253 (312)
T ss_pred             HHHHHHHcCCCHHHcCCCCCHHHHHcCCCcCCC
Confidence            7889999999999997   58999999988653

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.86  E-value=4.7e-22  Score=167.69  Aligned_cols=136  Identities=18%  Similarity=0.121  Sum_probs=96.1

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCc-eeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPK-TIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~   83 (231)
                      .||||||+|||++.++.+||+|||+++......... .....++..|+|||++....++.++||||+|+++|++++ |+.
T Consensus       234 iHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~  313 (374)
T cd05106         234 IHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKS  313 (374)
T ss_pred             EeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCC
Confidence            599999999999999999999999987654322111 112234567999999988889999999999999999997 999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||......                                      ..+..    .....     ..+..    +.....
T Consensus       314 Pf~~~~~~--------------------------------------~~~~~----~~~~~-----~~~~~----~~~~~~  342 (374)
T cd05106         314 PYPGILVN--------------------------------------SKFYK----MVKRG-----YQMSR----PDFAPP  342 (374)
T ss_pred             CCcccccc--------------------------------------HHHHH----HHHcc-----cCccC----CCCCCH
Confidence            98643211                                      00000    00000     00000    001124


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      .+.+++.+||+.||++|||+.+|++.|..
T Consensus       343 ~l~~li~~cl~~dp~~RPs~~~l~~~l~~  371 (374)
T cd05106         343 EIYSIMKMCWNLEPTERPTFSQISQLIQR  371 (374)
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence            56788999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.86  E-value=7e-22  Score=158.57  Aligned_cols=135  Identities=21%  Similarity=0.144  Sum_probs=96.8

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~p   84 (231)
                      .||||||+||+++.++.+||+|||++...............++..|++||.+.+..++.++||||+|++++++++ |..|
T Consensus       126 ~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p  205 (263)
T cd05052         126 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP  205 (263)
T ss_pred             eecccCcceEEEcCCCcEEeCCCccccccccceeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCC
Confidence            599999999999999999999999987654322111111223457999999988888999999999999999998 8888


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |......+.                                          .....          .......+......
T Consensus       206 ~~~~~~~~~------------------------------------------~~~~~----------~~~~~~~~~~~~~~  233 (263)
T cd05052         206 YPGIDLSQV------------------------------------------YELLE----------KGYRMERPEGCPPK  233 (263)
T ss_pred             CCCCCHHHH------------------------------------------HHHHH----------CCCCCCCCCCCCHH
Confidence            865332211                                          00000          00001111122355


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      +.+++.+||+.+|++|||+.++++.|+.
T Consensus       234 ~~~li~~cl~~~p~~Rp~~~~l~~~l~~  261 (263)
T cd05052         234 VYELMRACWQWNPSDRPSFAEIHQAFET  261 (263)
T ss_pred             HHHHHHHHccCCcccCCCHHHHHHHHHh
Confidence            7889999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.86  E-value=8.6e-22  Score=162.23  Aligned_cols=84  Identities=21%  Similarity=0.259  Sum_probs=67.4

Q ss_pred             eeecCCCCCCeee----CCCCcEEEeccccccccCCCCCC--ceeEeeccccccchhhhhhC-CCCCCcccHhHHHHHHH
Q 045790            5 AYSRSPELPPGRG----DFNFNAKLGDFGLARLMDHELGP--KTIMLVGTLAYMASEYISTG-RVSKELDVFSFRVVALE   77 (231)
Q Consensus         5 ~~~rdlk~~nil~----~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~e   77 (231)
                      -.||||||+|||+    +.++.+||+|||+++........  ......++..|+|||++.+. .++.++|+||+||++++
T Consensus       129 ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~e  208 (317)
T cd07868         129 VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAE  208 (317)
T ss_pred             EEcCCCCHHHEEEecCCCCcCcEEEeecCceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHH
Confidence            3599999999999    45678999999999766432211  12345778899999998764 47889999999999999


Q ss_pred             HHhCCCccccc
Q 045790           78 IATGRKVINRY   88 (231)
Q Consensus        78 l~~g~~p~~~~   88 (231)
                      +++|+.||...
T Consensus       209 l~~g~~~f~~~  219 (317)
T cd07868         209 LLTSEPIFHCR  219 (317)
T ss_pred             HHhCCCCccCC
Confidence            99999999643

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.86  E-value=4e-22  Score=179.99  Aligned_cols=137  Identities=22%  Similarity=0.137  Sum_probs=103.8

Q ss_pred             eee-ecCCCCCCeeeCCCCcEEEeccccccccCCCCCCce-eEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-
Q 045790            4 VAY-SRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKT-IMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-   80 (231)
Q Consensus         4 ~~~-~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~-~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-   80 (231)
                      ..| ||||..+|+|++....+||+|||+++-+........ ....-...|||||.+..+.|+.++||||||+++||+++ 
T Consensus       821 ~~fvHRDLAaRNCLL~~~r~VKIaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifsl  900 (1025)
T KOG1095|consen  821 KHFVHRDLAARNCLLDERRVVKIADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSL  900 (1025)
T ss_pred             CCCcCcchhhhheeecccCcEEEcccchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhC
Confidence            345 999999999999999999999999984332222221 11123458999999999999999999999999999998 


Q ss_pred             CCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHH
Q 045790           81 GRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQ  160 (231)
Q Consensus        81 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  160 (231)
                      |..||......                                       ++...+            . ...+-..+..
T Consensus       901 G~~PY~~~~n~---------------------------------------~v~~~~------------~-~ggRL~~P~~  928 (1025)
T KOG1095|consen  901 GATPYPSRSNF---------------------------------------EVLLDV------------L-EGGRLDPPSY  928 (1025)
T ss_pred             CCCCCCCcchH---------------------------------------HHHHHH------------H-hCCccCCCCC
Confidence            88999765421                                       111111            1 1113445567


Q ss_pred             HHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          161 QMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       161 ~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      |...+.++|..||+.+|++||+++.|+..+..
T Consensus       929 CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~  960 (1025)
T KOG1095|consen  929 CPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPA  960 (1025)
T ss_pred             CChHHHHHHHHHccCChhhCccHHHHHhhhhh
Confidence            77888999999999999999999999986655

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.86  E-value=5.9e-22  Score=168.08  Aligned_cols=174  Identities=17%  Similarity=0.077  Sum_probs=106.9

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCC-CceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELG-PKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      .||||||+|||++.++.++|+|||++........ .......|+..|+|||++.+..++.++||||+||++|+|++|+.|
T Consensus       207 vHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~p  286 (392)
T PHA03207        207 IHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVT  286 (392)
T ss_pred             cccCCCHHHEEEcCCCCEEEccCccccccCcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCC
Confidence            5999999999999999999999999876543222 122345789999999999888899999999999999999999999


Q ss_pred             cccchhhh---hhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHH
Q 045790           85 INRYKAQK---LRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQ  161 (231)
Q Consensus        85 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  161 (231)
                      |.......   .+..+..........            ..    ......+.....+............+.+..   ...
T Consensus       287 f~~~~~~~~~~~l~~i~~~~~~~~~~------------~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~  347 (392)
T PHA03207        287 LFGKQVKSSSSQLRSIIRCMQVHPLE------------FP----QNGSTNLCKHFKQYAIVLRPPYTIPPVIRK---YGM  347 (392)
T ss_pred             CCCCCCCCcHHHHHHHHHHhccCccc------------cC----CccchhHHHHHHhhcccccCCccccchhhc---cCc
Confidence            97643211   111111100000000            00    001111111111111000000000000000   011


Q ss_pred             HHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCCCC
Q 045790          162 MTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTMPN  198 (231)
Q Consensus       162 ~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~~~  198 (231)
                      ...+..++.+||+.||++|||+.++++|++|....+.
T Consensus       348 ~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~~~~~  384 (392)
T PHA03207        348 HMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTKEPIN  384 (392)
T ss_pred             chhHHHHHHHHhccChhhCCCHHHHhhCchhhccchh
Confidence            2345678899999999999999999999999765443

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.86  E-value=7.3e-22  Score=159.95  Aligned_cols=137  Identities=18%  Similarity=0.185  Sum_probs=98.2

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCC-ceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGP-KTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~   83 (231)
                      .||||||+||+++.++.+||+|||+++........ ......++..|++||.+.+..++.++||||||+++||+++ |..
T Consensus       131 iH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~  210 (279)
T cd05111         131 VHRNLAARNILLKSDSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAE  210 (279)
T ss_pred             eccccCcceEEEcCCCcEEEcCCccceeccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCC
Confidence            59999999999999999999999999765432211 1223345678999999988889999999999999999998 999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||......                                       .+...+.    .....  ..+.       .+..
T Consensus       211 p~~~~~~~---------------------------------------~~~~~~~----~~~~~--~~~~-------~~~~  238 (279)
T cd05111         211 PYAGMRPH---------------------------------------EVPDLLE----KGERL--AQPQ-------ICTI  238 (279)
T ss_pred             CCCCCCHH---------------------------------------HHHHHHH----CCCcC--CCCC-------CCCH
Confidence            98653321                                       0111110    00000  0011       1123


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      .+..++.+||..+|++|||+.|+++.+....
T Consensus       239 ~~~~li~~c~~~~p~~Rps~~el~~~l~~~~  269 (279)
T cd05111         239 DVYMVMVKCWMIDENVRPTFKELANEFTRMA  269 (279)
T ss_pred             HHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence            4577889999999999999999999887644

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.86  E-value=5.3e-22  Score=165.38  Aligned_cols=164  Identities=16%  Similarity=0.127  Sum_probs=102.8

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhh-CCCCCCcccHhHHHHHHHHHhCCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIST-GRVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      .||||||+||+++.++.+||+|||+++.....    .....|+..|+|||++.+ ..++.++||||+||++++|++|+.|
T Consensus       140 vHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~p  215 (343)
T cd07878         140 IHRDLKPSNVAVNEDCELRILDFGLARQADDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKAL  215 (343)
T ss_pred             ecccCChhhEEECCCCCEEEcCCccceecCCC----cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCC
Confidence            59999999999999999999999998765432    223467889999999876 4578899999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |......+....+...............               .......+...      +.......+...+ ......
T Consensus       216 f~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~------~~~~~~~~~~~~~-~~~~~~  273 (343)
T cd07878         216 FPGNDYIDQLKRIMEVVGTPSPEVLKKI---------------SSEHARKYIQS------LPHMPQQDLKKIF-RGANPL  273 (343)
T ss_pred             CCCCCHHHHHHHHHHHhCCCCHHHHHhc---------------chhhHHHHhhc------cccccchhHHHhc-cCCCHH
Confidence            9765433322222211111000000000               00000000000      0000000000000 001123


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhcccC
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNFETT  195 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~  195 (231)
                      +.+++.+|++.||++|||+.|+++|+++...
T Consensus       274 ~~~li~~mL~~dp~~R~s~~ell~hp~~~~~  304 (343)
T cd07878         274 AIDLLEKMLVLDSDKRISASEALAHPYFSQY  304 (343)
T ss_pred             HHHHHHHHcCCChhhCCCHHHHhcCcchhcc
Confidence            5789999999999999999999999999653

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.86  E-value=2.1e-22  Score=171.30  Aligned_cols=135  Identities=21%  Similarity=0.142  Sum_probs=110.6

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~p   84 (231)
                      .||||..+|+|+.+|..+||+|||+++++............=.+-|.|||.+....|+.++|||+||+++||+.+ |..|
T Consensus       387 IHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsP  466 (1157)
T KOG4278|consen  387 IHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSP  466 (1157)
T ss_pred             hhhhhhhhhccccccceEEeeccchhhhhcCCceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCC
Confidence            399999999999999999999999999997554332222233567999999998899999999999999999986 8899


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |.+.+-                                                    ..+-.++...++.+.++.|...
T Consensus       467 YPGidl----------------------------------------------------SqVY~LLEkgyRM~~PeGCPpk  494 (1157)
T KOG4278|consen  467 YPGIDL----------------------------------------------------SQVYGLLEKGYRMDGPEGCPPK  494 (1157)
T ss_pred             CCCccH----------------------------------------------------HHHHHHHhccccccCCCCCCHH
Confidence            976442                                                    1223344566777778888899


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      +.+||+.||+|.|.+||++.|+.+.++.
T Consensus       495 VYeLMraCW~WsPsDRPsFaeiHqafEt  522 (1157)
T KOG4278|consen  495 VYELMRACWNWSPSDRPSFAEIHQAFET  522 (1157)
T ss_pred             HHHHHHHHhcCCcccCccHHHHHHHHHH
Confidence            9999999999999999999999987764

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.86  E-value=4.4e-22  Score=172.88  Aligned_cols=134  Identities=18%  Similarity=0.155  Sum_probs=98.5

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCC-ceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGP-KTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      .||||||+|||++.++.+||+|||+++........ .....+|+..|+|||++.+..++.++||||+||++++|++|+.|
T Consensus       191 vHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~P  270 (478)
T PTZ00267        191 MHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRP  270 (478)
T ss_pred             EECCcCHHhEEECCCCcEEEEeCcCceecCCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCC
Confidence            59999999999999999999999999876432221 13345689999999999888899999999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |.......                                          ......... .    .     ..+......
T Consensus       271 f~~~~~~~------------------------------------------~~~~~~~~~-~----~-----~~~~~~s~~  298 (478)
T PTZ00267        271 FKGPSQRE------------------------------------------IMQQVLYGK-Y----D-----PFPCPVSSG  298 (478)
T ss_pred             CCCCCHHH------------------------------------------HHHHHHhCC-C----C-----CCCccCCHH
Confidence            96433211                                          111110000 0    0     011112245


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHh
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLN  191 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~  191 (231)
                      +.+++.+||+.||++||++.+++.+..
T Consensus       299 ~~~li~~~L~~dP~~Rps~~~~l~~~~  325 (478)
T PTZ00267        299 MKALLDPLLSKNPALRPTTQQLLHTEF  325 (478)
T ss_pred             HHHHHHHHhccChhhCcCHHHHHhCHH
Confidence            678899999999999999999987643

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.86  E-value=6.3e-22  Score=160.41  Aligned_cols=134  Identities=19%  Similarity=0.159  Sum_probs=96.7

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCc-eeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPK-TIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~   83 (231)
                      .||||||.||+++.++.+||+|||+++......... .....++..|+|||.+....++.++||||+|++++++++ |..
T Consensus       146 ~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~  225 (283)
T cd05091         146 VHKDLATRNVLVFDKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQ  225 (283)
T ss_pred             cccccchhheEecCCCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCC
Confidence            599999999999999999999999987654322111 122345678999999988888999999999999999998 778


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||......+                                          +...... ...         ...+.....
T Consensus       226 p~~~~~~~~------------------------------------------~~~~i~~-~~~---------~~~~~~~~~  253 (283)
T cd05091         226 PYCGYSNQD------------------------------------------VIEMIRN-RQV---------LPCPDDCPA  253 (283)
T ss_pred             CCCCCCHHH------------------------------------------HHHHHHc-CCc---------CCCCCCCCH
Confidence            876433221                                          1111110 000         011122334


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHh
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLN  191 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~  191 (231)
                      .+..++..||+.+|++||++.+|++.|.
T Consensus       254 ~~~~li~~cl~~~p~~RP~~~~i~~~l~  281 (283)
T cd05091         254 WVYTLMLECWNEFPSRRPRFKDIHSRLR  281 (283)
T ss_pred             HHHHHHHHHhCCCcccCCCHHHHHHHhh
Confidence            5678999999999999999999999885

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.86  E-value=2.7e-22  Score=166.29  Aligned_cols=135  Identities=18%  Similarity=0.141  Sum_probs=100.0

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+|||++.++.+||+|||+++..... ........|+..|+|||++.+..++.++||||+||+++++++|+.||
T Consensus       117 vHrDikp~NIll~~~~~~kL~DfG~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf  195 (328)
T cd05593         117 VYRDLKLENLMLDKDGHIKITDFGLCKEGITD-AATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF  195 (328)
T ss_pred             EecccCHHHeEECCCCcEEEecCcCCccCCCc-ccccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCC
Confidence            59999999999999999999999998753221 11223457899999999998888999999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      ...........+.                                          . .      +..+..    .....+
T Consensus       196 ~~~~~~~~~~~~~------------------------------------------~-~------~~~~p~----~~~~~~  222 (328)
T cd05593         196 YNQDHEKLFELIL------------------------------------------M-E------DIKFPR----TLSADA  222 (328)
T ss_pred             CCCCHHHHHHHhc------------------------------------------c-C------CccCCC----CCCHHH
Confidence            6543221111110                                          0 0      001111    112346


Q ss_pred             HHHHHhhcCCCCCCCC-----CHHHHHHHHhccc
Q 045790          166 LIVGLWCAHPDRCFRP-----SIRQAIQVLNFET  194 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rp-----s~~ell~~l~~~~  194 (231)
                      .+++.+||+.||++|+     ++.++++|.++..
T Consensus       223 ~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~  256 (328)
T cd05593         223 KSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTG  256 (328)
T ss_pred             HHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcCC
Confidence            7788999999999997     8999999988754

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.86  E-value=9.3e-22  Score=169.38  Aligned_cols=82  Identities=20%  Similarity=0.157  Sum_probs=67.5

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCC-ceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCC
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGP-KTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRK   83 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~   83 (231)
                      -.||||||+|||++.++.+||+|||+++........ ......|+..|++||++.+..++.++||||+||++||+++|..
T Consensus       281 IvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~  360 (461)
T PHA03211        281 IIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTA  360 (461)
T ss_pred             EEECcCCHHHEEECCCCCEEEcccCCceecccccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCC
Confidence            359999999999999999999999999765432211 1223568999999999988889999999999999999998876


Q ss_pred             ccc
Q 045790           84 VIN   86 (231)
Q Consensus        84 p~~   86 (231)
                      ++.
T Consensus       361 ~lf  363 (461)
T PHA03211        361 SLF  363 (461)
T ss_pred             Ccc
Confidence            553

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.86  E-value=4.7e-22  Score=164.24  Aligned_cols=143  Identities=17%  Similarity=0.064  Sum_probs=107.0

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCC----ceeEeeccccccchhhhhhCC----CCCCcccHhHHHHHHH
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGP----KTIMLVGTLAYMASEYISTGR----VSKELDVFSFRVVALE   77 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~----~~~~~~g~~~y~aPE~~~~~~----~~~~~Dv~s~G~vl~e   77 (231)
                      .||||||+|+|++.+|.+||+|||++.....+...    ......||+.|+|||.+.++.    .+.+.||||+|+++|.
T Consensus       232 iHRDIKPsNLLl~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYC  311 (576)
T KOG0585|consen  232 IHRDIKPSNLLLSSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYC  311 (576)
T ss_pred             eccccchhheEEcCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHH
Confidence            59999999999999999999999999765322111    123468999999999997632    3677999999999999


Q ss_pred             HHhCCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcc
Q 045790           78 IATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRF  157 (231)
Q Consensus        78 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  157 (231)
                      ++.|+.||.+.........|+                                                   ...+.-..
T Consensus       312 llfG~~PF~~~~~~~l~~KIv---------------------------------------------------n~pL~fP~  340 (576)
T KOG0585|consen  312 LLFGQLPFFDDFELELFDKIV---------------------------------------------------NDPLEFPE  340 (576)
T ss_pred             hhhccCCcccchHHHHHHHHh---------------------------------------------------cCcccCCC
Confidence            999999998655332222222                                                   22221111


Q ss_pred             cHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCCCCC
Q 045790          158 DEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTMPNL  199 (231)
Q Consensus       158 ~~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~~~~  199 (231)
                      ..+....+-+|++++|..||++|.+..+|..|+|-......+
T Consensus       341 ~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~g~~~  382 (576)
T KOG0585|consen  341 NPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRDGDSP  382 (576)
T ss_pred             cccccHHHHHHHHHHhhcChhheeehhhheecceeccCCCCC
Confidence            223455667789999999999999999999999987765443

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.86  E-value=4.2e-22  Score=159.56  Aligned_cols=136  Identities=19%  Similarity=0.175  Sum_probs=97.7

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCce--eEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKT--IMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~--~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~   83 (231)
                      .||||||+||+++.++.++|+|||++...........  ....++..|+|||.+.+..++.++|+||+|+++|++++|+.
T Consensus       126 ~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~  205 (263)
T cd06625         126 VHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKP  205 (263)
T ss_pred             ecCCCCHHHEEEcCCCCEEEeecccceeccccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCC
Confidence            5999999999999999999999999876532111111  22356778999999988888999999999999999999999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||......                                         ... ....         ........+.....
T Consensus       206 p~~~~~~~-----------------------------------------~~~-~~~~---------~~~~~~~~~~~~~~  234 (263)
T cd06625         206 PWAEFEAM-----------------------------------------AAI-FKIA---------TQPTNPQLPSHVSP  234 (263)
T ss_pred             CccccchH-----------------------------------------HHH-HHHh---------ccCCCCCCCccCCH
Confidence            98643211                                         000 0000         00000111222234


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      .+.+++.+||+.+|++|||+.++++|+++
T Consensus       235 ~~~~li~~~l~~~p~~Rpt~~~ll~~~~~  263 (263)
T cd06625         235 DARNFLRRTFVENAKKRPSAEELLRHFFV  263 (263)
T ss_pred             HHHHHHHHHhhcCcccCCCHHHHhhCCCC
Confidence            56788999999999999999999999874

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.86  E-value=4.1e-22  Score=164.36  Aligned_cols=135  Identities=19%  Similarity=0.150  Sum_probs=99.0

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+||+++.++.+||+|||++....... .......|+..|+|||++.+..++.++||||+||++++|++|..||
T Consensus       118 vH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf  196 (316)
T cd05592         118 IYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE-GKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPF  196 (316)
T ss_pred             EeCCCCHHHeEECCCCCEEEccCcCCeECCCCC-CccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCC
Confidence            599999999999999999999999987543222 2234457899999999998888999999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      ...........+                                          ...       .+.    ++......+
T Consensus       197 ~~~~~~~~~~~i------------------------------------------~~~-------~~~----~~~~~~~~~  223 (316)
T cd05592         197 HGEDEDELFDSI------------------------------------------LND-------RPH----FPRWISKEA  223 (316)
T ss_pred             CCCCHHHHHHHH------------------------------------------HcC-------CCC----CCCCCCHHH
Confidence            754322111111                                          000       001    111122345


Q ss_pred             HHHHHhhcCCCCCCCCCH-HHHHHHHhccc
Q 045790          166 LIVGLWCAHPDRCFRPSI-RQAIQVLNFET  194 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps~-~ell~~l~~~~  194 (231)
                      .+++..||+.||++||++ .++++|.++..
T Consensus       224 ~~ll~~~l~~~P~~R~~~~~~l~~h~~~~~  253 (316)
T cd05592         224 KDCLSKLFERDPTKRLGVDGDIRQHPFFRG  253 (316)
T ss_pred             HHHHHHHccCCHHHcCCChHHHHcCcccCC
Confidence            678899999999999986 47888877643

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.86  E-value=4.7e-22  Score=173.46  Aligned_cols=80  Identities=21%  Similarity=0.194  Sum_probs=67.7

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+|||++.++.+||+|||+++.+............|+..|++||++.+..++.++||||+||++|+|++|..++
T Consensus       289 iHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p  368 (501)
T PHA03210        289 IHRDIKLENIFLNCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCP  368 (501)
T ss_pred             ecCCCCHHHEEECCCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCC
Confidence            59999999999999999999999999876543222233457899999999998888999999999999999999987543

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.86  E-value=4.3e-22  Score=162.32  Aligned_cols=132  Identities=20%  Similarity=0.139  Sum_probs=99.8

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+||+++.++.+||+|||++......    .....|+..|+|||++.+..++.++||||+||++++|++|+.||
T Consensus       123 ~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf  198 (291)
T cd05612         123 VYRDLKPENILLDKEGHIKLTDFGFAKKLRDR----TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPF  198 (291)
T ss_pred             eecCCCHHHeEECCCCCEEEEecCcchhccCC----cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence            59999999999999999999999998765432    12346889999999998888899999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      ...........+                                          .. ..      ..    ++......+
T Consensus       199 ~~~~~~~~~~~i------------------------------------------~~-~~------~~----~~~~~~~~~  225 (291)
T cd05612         199 FDDNPFGIYEKI------------------------------------------LA-GK------LE----FPRHLDLYA  225 (291)
T ss_pred             CCCCHHHHHHHH------------------------------------------Hh-CC------cC----CCccCCHHH
Confidence            754322111111                                          00 00      00    111112346


Q ss_pred             HHHHHhhcCCCCCCCCC-----HHHHHHHHhccc
Q 045790          166 LIVGLWCAHPDRCFRPS-----IRQAIQVLNFET  194 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps-----~~ell~~l~~~~  194 (231)
                      .+++.+||+.||.+|++     +.++++|.++..
T Consensus       226 ~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~  259 (291)
T cd05612         226 KDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKS  259 (291)
T ss_pred             HHHHHHHcCCCHHHccCCccCCHHHHhcCccccC
Confidence            78999999999999995     999999999854

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.86  E-value=9.6e-22  Score=162.45  Aligned_cols=135  Identities=17%  Similarity=0.122  Sum_probs=100.6

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+||+++.++.+||+|||++...... ........|+..|+|||++.+..++.++|+||+||++|+|++|+.||
T Consensus       118 vHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf  196 (321)
T cd05591         118 IYRDLKLDNILLDAEGHCKLADFGMCKEGILN-GVTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPF  196 (321)
T ss_pred             eccCCCHHHeEECCCCCEEEeecccceecccC-CccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCC
Confidence            59999999999999999999999998653221 12223456889999999998888999999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      ...........+.                                          ...       ..    .+......+
T Consensus       197 ~~~~~~~~~~~i~------------------------------------------~~~-------~~----~p~~~~~~~  223 (321)
T cd05591         197 EADNEDDLFESIL------------------------------------------HDD-------VL----YPVWLSKEA  223 (321)
T ss_pred             CCCCHHHHHHHHH------------------------------------------cCC-------CC----CCCCCCHHH
Confidence            7554321111111                                          000       00    000112346


Q ss_pred             HHHHHhhcCCCCCCCC-------CHHHHHHHHhccc
Q 045790          166 LIVGLWCAHPDRCFRP-------SIRQAIQVLNFET  194 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rp-------s~~ell~~l~~~~  194 (231)
                      .+++..|++.||++|+       ++.++++|+++..
T Consensus       224 ~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~  259 (321)
T cd05591         224 VSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKE  259 (321)
T ss_pred             HHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCC
Confidence            7889999999999999       9999999998744

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.86  E-value=1.8e-21  Score=158.99  Aligned_cols=140  Identities=12%  Similarity=0.008  Sum_probs=98.2

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCC------CceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHH
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELG------PKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIA   79 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~------~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~   79 (231)
                      .||||||+|||++.++.++|+|||+++.......      .......|+..|+|||++.+..++.++||||+|+++++++
T Consensus       148 iHrDiKp~Nill~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~  227 (294)
T PHA02882        148 SHGDIKPENIMVDGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWA  227 (294)
T ss_pred             ecCCCCHHHEEEcCCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHH
Confidence            5999999999999999999999999976532211      1112346899999999998888999999999999999999


Q ss_pred             hCCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccH
Q 045790           80 TGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDE  159 (231)
Q Consensus        80 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  159 (231)
                      +|+.||.......-                                 .......++..+...         .....   .
T Consensus       228 ~g~~P~~~~~~~~~---------------------------------~~~~~~~~~~~~~~~---------~~~~~---~  262 (294)
T PHA02882        228 GIKLPWKGFGHNGN---------------------------------LIHAAKCDFIKRLHE---------GKIKI---K  262 (294)
T ss_pred             hCCCCCCccccchH---------------------------------HHHHhHHHHHHHhhh---------hhhcc---C
Confidence            99999975421000                                 000000111111110         00000   0


Q ss_pred             HHHHHHHHHHHhhcCCCCCCCCCHHHHHHHH
Q 045790          160 QQMTCLLIVGLWCAHPDRCFRPSIRQAIQVL  190 (231)
Q Consensus       160 ~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l  190 (231)
                      .....+.+++..|++.+|++||++.++++.+
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~  293 (294)
T PHA02882        263 NANKFIYDFIECVTKLSYEEKPDYDALIKIF  293 (294)
T ss_pred             CCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence            1235578899999999999999999999875

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.86  E-value=2.6e-21  Score=160.73  Aligned_cols=178  Identities=19%  Similarity=0.138  Sum_probs=105.7

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCc
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      ..||||||+||+++.++.+||+|||++......   ......|+..|+|||.+.+..++.++|+||+||+++++++|+.|
T Consensus       125 ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p  201 (333)
T cd06650         125 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYP  201 (333)
T ss_pred             EEecCCChhhEEEcCCCCEEEeeCCcchhhhhh---ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCC
Confidence            359999999999999999999999998755321   12234678899999999888889999999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCcc-ccccccccchhhc--cCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGS-VEKLGVEGEKAVL--GGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQ  161 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  161 (231)
                      |...........+........... .............  .... ................      ..+.+..   ...
T Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~------~~~~~~~---~~~  271 (333)
T cd06650         202 IPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSYGPDS-RPPMAIFELLDYIVNE------PPPKLPS---GVF  271 (333)
T ss_pred             CCCcchhHHHHHhcCcccCCccccccCcccCCccchhhhhcccc-cccccHHHHHHHHhcC------CCccCCC---CCc
Confidence            976543322221111110000000 0000000000000  0000 0000000100000000      0011100   011


Q ss_pred             HHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccC
Q 045790          162 MTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETT  195 (231)
Q Consensus       162 ~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~  195 (231)
                      ...+.+|+.+||+.||++|||+.|+++|.++...
T Consensus       272 ~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~  305 (333)
T cd06650         272 GAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS  305 (333)
T ss_pred             CHHHHHHHHHhccCCcccCcCHHHHhhCHHHhcC
Confidence            2447889999999999999999999999998654

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.86  E-value=4e-22  Score=164.69  Aligned_cols=135  Identities=16%  Similarity=0.137  Sum_probs=100.6

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+||+++.++.+||+|||+++..... ........|+..|+|||++.+..++.++|+||+||++|++++|+.||
T Consensus       118 vH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf  196 (320)
T cd05590         118 IYRDLKLDNVLLDHEGHCKLADFGMCKEGIFN-GKTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPF  196 (320)
T ss_pred             EeCCCCHHHeEECCCCcEEEeeCCCCeecCcC-CCcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCC
Confidence            59999999999999999999999998753221 11223457899999999998888899999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      ...........+..                                          ..       ...    +......+
T Consensus       197 ~~~~~~~~~~~i~~------------------------------------------~~-------~~~----~~~~~~~~  223 (320)
T cd05590         197 EAENEDDLFEAILN------------------------------------------DE-------VVY----PTWLSQDA  223 (320)
T ss_pred             CCCCHHHHHHHHhc------------------------------------------CC-------CCC----CCCCCHHH
Confidence            75443211111110                                          00       000    00112345


Q ss_pred             HHHHHhhcCCCCCCCCCH------HHHHHHHhccc
Q 045790          166 LIVGLWCAHPDRCFRPSI------RQAIQVLNFET  194 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps~------~ell~~l~~~~  194 (231)
                      .+++..|++.||++|+++      .++++|+++..
T Consensus       224 ~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~  258 (320)
T cd05590         224 VDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKE  258 (320)
T ss_pred             HHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCC
Confidence            788999999999999998      99999999854

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.86  E-value=1.6e-22  Score=167.43  Aligned_cols=136  Identities=20%  Similarity=0.180  Sum_probs=100.3

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCc
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      -.||||||+|||++.++.+||+|||+++..... ........|+..|+|||++.+..++.++||||+||++++|++|..|
T Consensus       117 ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~P  195 (325)
T cd05594         117 VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD-GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP  195 (325)
T ss_pred             EEecCCCCCeEEECCCCCEEEecCCCCeecCCC-CcccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCC
Confidence            359999999999999999999999998653211 1122345689999999999888899999999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |...........+..                                           .      ...+..    .....
T Consensus       196 f~~~~~~~~~~~i~~-------------------------------------------~------~~~~p~----~~~~~  222 (325)
T cd05594         196 FYNQDHEKLFELILM-------------------------------------------E------EIRFPR----TLSPE  222 (325)
T ss_pred             CCCCCHHHHHHHHhc-------------------------------------------C------CCCCCC----CCCHH
Confidence            965432211111100                                           0      000111    11234


Q ss_pred             HHHHHHhhcCCCCCCCC-----CHHHHHHHHhccc
Q 045790          165 LLIVGLWCAHPDRCFRP-----SIRQAIQVLNFET  194 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rp-----s~~ell~~l~~~~  194 (231)
                      +..++.+||+.||++|+     ++.++++|.++..
T Consensus       223 ~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~  257 (325)
T cd05594         223 AKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAG  257 (325)
T ss_pred             HHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCC
Confidence            67889999999999997     9999999998754

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.86  E-value=4.7e-22  Score=164.04  Aligned_cols=135  Identities=18%  Similarity=0.122  Sum_probs=99.2

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+||+++.++.++|+|||+++..... ........|+..|+|||++.+..++.++||||+|+++++|++|..||
T Consensus       118 vHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf  196 (316)
T cd05620         118 IYRDLKLDNVMLDRDGHIKIADFGMCKENVFG-DNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPF  196 (316)
T ss_pred             EecCCCHHHeEECCCCCEEeCccCCCeecccC-CCceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCC
Confidence            59999999999999999999999998643211 12234567899999999998888999999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      ...........+..                                           .      .+.+..    .....+
T Consensus       197 ~~~~~~~~~~~~~~-------------------------------------------~------~~~~~~----~~~~~~  223 (316)
T cd05620         197 HGDDEDELFESIRV-------------------------------------------D------TPHYPR----WITKES  223 (316)
T ss_pred             CCCCHHHHHHHHHh-------------------------------------------C------CCCCCC----CCCHHH
Confidence            75442211111100                                           0      011111    112345


Q ss_pred             HHHHHhhcCCCCCCCCCH-HHHHHHHhccc
Q 045790          166 LIVGLWCAHPDRCFRPSI-RQAIQVLNFET  194 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps~-~ell~~l~~~~  194 (231)
                      .+++.+||+.||++|+++ .++++|+++..
T Consensus       224 ~~li~~~l~~dP~~R~~~~~~~~~h~~f~~  253 (316)
T cd05620         224 KDILEKLFERDPTRRLGVVGNIRGHPFFKT  253 (316)
T ss_pred             HHHHHHHccCCHHHcCCChHHHHcCCCcCC
Confidence            678999999999999997 57888988855

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.86  E-value=6.6e-22  Score=164.57  Aligned_cols=135  Identities=21%  Similarity=0.191  Sum_probs=107.9

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCc
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      ..|||||+.||+++.+..+||+|||+++.++... ....+.+||+.|++||.+.+.+|+.++||||+||.++||.+=+.+
T Consensus       127 iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~-~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~a  205 (426)
T KOG0589|consen  127 VLHRDLKCANIFLTKDKKVKLGDFGLAKILNPED-SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPA  205 (426)
T ss_pred             hhcccchhhhhhccccCceeecchhhhhhcCCch-hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccc
Confidence            3599999999999999999999999999987543 245678999999999999999999999999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |...+...+...+...                                                    .....+......
T Consensus       206 F~a~~m~~Li~ki~~~----------------------------------------------------~~~Plp~~ys~e  233 (426)
T KOG0589|consen  206 FKASNMSELILKINRG----------------------------------------------------LYSPLPSMYSSE  233 (426)
T ss_pred             cCccchHHHHHHHhhc----------------------------------------------------cCCCCCccccHH
Confidence            9876644222222211                                                    112223334456


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      +..++..|++.+|+.||++.+|+.++.-
T Consensus       234 l~~lv~~~l~~~P~~RPsa~~LL~~P~l  261 (426)
T KOG0589|consen  234 LRSLVKSMLRKNPEHRPSALELLRRPHL  261 (426)
T ss_pred             HHHHHHHHhhcCCccCCCHHHHhhChhh
Confidence            7778999999999999999999987554

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.86  E-value=3.7e-22  Score=165.72  Aligned_cols=141  Identities=15%  Similarity=0.066  Sum_probs=101.6

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+||+++.++.+||+|||++.....    ......|+..|+|||++.+..++.++||||+||++++|++|..||
T Consensus       123 vH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf  198 (333)
T cd05600         123 IHRDLKPENFLIDASGHIKLTDFGLSKGIVT----YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPF  198 (333)
T ss_pred             cccCCCHHHEEECCCCCEEEEeCcCCccccc----ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCC
Confidence            5999999999999999999999999876532    223456889999999998888999999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      ......+....+.                                   .|       ..   .................+
T Consensus       199 ~~~~~~~~~~~i~-----------------------------------~~-------~~---~~~~~~~~~~~~~~s~~~  233 (333)
T cd05600         199 SGSTPNETWENLK-----------------------------------YW-------KE---TLQRPVYDDPRFNLSDEA  233 (333)
T ss_pred             CCCCHHHHHHHHH-----------------------------------hc-------cc---cccCCCCCccccccCHHH
Confidence            7544321111110                                   00       00   000000000001123456


Q ss_pred             HHHHHhhcCCCCCCCCCHHHHHHHHhcccC
Q 045790          166 LIVGLWCAHPDRCFRPSIRQAIQVLNFETT  195 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps~~ell~~l~~~~~  195 (231)
                      .+++.+||+.+|++||++.++++|+++...
T Consensus       234 ~~li~~~l~~~~~rr~s~~~ll~h~~~~~~  263 (333)
T cd05600         234 WDLITKLINDPSRRFGSLEDIKNHPFFKEV  263 (333)
T ss_pred             HHHHHHHhhChhhhcCCHHHHHhCcccCCC
Confidence            788899999999999999999999998653

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.86  E-value=6.4e-22  Score=163.72  Aligned_cols=135  Identities=16%  Similarity=0.130  Sum_probs=99.8

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      +||||||+||+++.++.+||+|||++...... ........|+..|+|||.+.+..++.++|+||+||++|++++|+.||
T Consensus       123 vHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~-~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf  201 (324)
T cd05589         123 VYRDLKLDNLLLDTEGFVKIADFGLCKEGMGF-GDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPF  201 (324)
T ss_pred             EecCCCHHHeEECCCCcEEeCcccCCccCCCC-CCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCC
Confidence            59999999999999999999999998653221 12233457899999999998888899999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      ...........+                                          ....       ...    +......+
T Consensus       202 ~~~~~~~~~~~i------------------------------------------~~~~-------~~~----p~~~~~~~  228 (324)
T cd05589         202 PGDDEEEVFDSI------------------------------------------VNDE-------VRY----PRFLSREA  228 (324)
T ss_pred             CCCCHHHHHHHH------------------------------------------HhCC-------CCC----CCCCCHHH
Confidence            754322111111                                          0000       001    11112345


Q ss_pred             HHHHHhhcCCCCCCCC-----CHHHHHHHHhccc
Q 045790          166 LIVGLWCAHPDRCFRP-----SIRQAIQVLNFET  194 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rp-----s~~ell~~l~~~~  194 (231)
                      ..++.+||+.||.+||     ++.++++|+++..
T Consensus       229 ~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~  262 (324)
T cd05589         229 ISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRD  262 (324)
T ss_pred             HHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCC
Confidence            7889999999999999     7999999988754

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.85  E-value=9.7e-22  Score=160.11  Aligned_cols=139  Identities=19%  Similarity=0.176  Sum_probs=100.2

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCC-ceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CC
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGP-KTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GR   82 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~   82 (231)
                      -.||||||+||+++.++.++|+|||++......... ......++..|++||++.+..++.++||||+|++++++++ |.
T Consensus       144 i~H~dlkp~Nil~~~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~  223 (291)
T cd05094         144 FVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGK  223 (291)
T ss_pred             eeecccCcceEEEccCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCC
Confidence            359999999999999999999999998765432211 1122345678999999988888999999999999999998 99


Q ss_pred             CccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           83 KVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        83 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      .||.......                                       ....    .......         .......
T Consensus       224 ~p~~~~~~~~---------------------------------------~~~~----~~~~~~~---------~~~~~~~  251 (291)
T cd05094         224 QPWFQLSNTE---------------------------------------VIEC----ITQGRVL---------ERPRVCP  251 (291)
T ss_pred             CCCCCCCHHH---------------------------------------HHHH----HhCCCCC---------CCCccCC
Confidence            9986433221                                       1110    0000000         0111123


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccC
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETT  195 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~  195 (231)
                      ..+.+++.+||+.+|++|||+.+|++.|.....
T Consensus       252 ~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~  284 (291)
T cd05094         252 KEVYDIMLGCWQREPQQRLNIKEIYKILHALGK  284 (291)
T ss_pred             HHHHHHHHHHcccChhhCcCHHHHHHHHHHHHh
Confidence            457889999999999999999999999987643

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.85  E-value=4e-22  Score=164.07  Aligned_cols=82  Identities=22%  Similarity=0.272  Sum_probs=66.5

Q ss_pred             eecCCCCCCeee----CCCCcEEEeccccccccCCCCCC--ceeEeeccccccchhhhhhC-CCCCCcccHhHHHHHHHH
Q 045790            6 YSRSPELPPGRG----DFNFNAKLGDFGLARLMDHELGP--KTIMLVGTLAYMASEYISTG-RVSKELDVFSFRVVALEI   78 (231)
Q Consensus         6 ~~rdlk~~nil~----~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~el   78 (231)
                      .||||||+||++    +.++.+||+|||+++........  ......++..|+|||++.+. .++.++||||+|++++++
T Consensus       130 vH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el  209 (317)
T cd07867         130 LHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAEL  209 (317)
T ss_pred             EcCCCCHHHEEEccCCCCCCcEEEeeccceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHH
Confidence            599999999999    56678999999999876432211  12345678899999998764 478899999999999999


Q ss_pred             HhCCCcccc
Q 045790           79 ATGRKVINR   87 (231)
Q Consensus        79 ~~g~~p~~~   87 (231)
                      ++|+.||..
T Consensus       210 ~tg~~~f~~  218 (317)
T cd07867         210 LTSEPIFHC  218 (317)
T ss_pred             HhCCCCccc
Confidence            999999964

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.85  E-value=7.3e-22  Score=162.22  Aligned_cols=168  Identities=17%  Similarity=0.050  Sum_probs=105.4

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhC-CCCCCcccHhHHHHHHHHHhCCC
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTG-RVSKELDVFSFRVVALEIATGRK   83 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~el~~g~~   83 (231)
                      -.||||||+||+++.++.+||+|||++....... .......++..|+|||.+.+. .++.++||||+|+++++|++|+.
T Consensus       125 ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~  203 (309)
T cd07872         125 VLHRDLKPQNLLINERGELKLADFGLARAKSVPT-KTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRP  203 (309)
T ss_pred             eecCCCCHHHEEECCCCCEEECccccceecCCCc-cccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCC
Confidence            3599999999999999999999999987643221 112234568899999998653 47889999999999999999999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||......+....+...........+           .....      ...+..............+      .......
T Consensus       204 pf~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~------~~~~~~~~~~~~~~~~~~~------~~~~~~~  260 (309)
T cd07872         204 LFPGSTVEDELHLIFRLLGTPTEETW-----------PGISS------NDEFKNYNFPKYKPQPLIN------HAPRLDT  260 (309)
T ss_pred             CCCCCChHHHHHHHHHHhCCCCHHHH-----------hhhcc------hhhhhhhhcCccCCCchhh------hccCCCH
Confidence            99766544333333322211111110           00000      0000000000000000000      0001123


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                      .+.+++.+|++.||++|||+.|+++|.++....
T Consensus       261 ~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~  293 (309)
T cd07872         261 EGIELLTKFLQYESKKRISAEEAMKHAYFRSLG  293 (309)
T ss_pred             HHHHHHHHhccCChhhCCCHHHHhcChhhhhcc
Confidence            457899999999999999999999999997643

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.85  E-value=6.5e-22  Score=164.08  Aligned_cols=144  Identities=18%  Similarity=0.159  Sum_probs=102.1

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+||+++.++.+||+|||+++..... ........|+..|+|||++.+..++.++|+||+|+++++|++|+.||
T Consensus       118 vH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf  196 (329)
T cd05618         118 IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP-GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF  196 (329)
T ss_pred             eeCCCCHHHEEECCCCCEEEeeCCccccccCC-CCccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCC
Confidence            59999999999999999999999998753211 11223457899999999998888999999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      ......                                  .........++.+.......          .++......+
T Consensus       197 ~~~~~~----------------------------------~~~~~~~~~~~~~~i~~~~~----------~~p~~~~~~~  232 (329)
T cd05618         197 DIVGSS----------------------------------DNPDQNTEDYLFQVILEKQI----------RIPRSLSVKA  232 (329)
T ss_pred             ccCCCc----------------------------------CCcccccHHHHHHHHhcCCC----------CCCCCCCHHH
Confidence            532110                                  00111122222222211110          1111223456


Q ss_pred             HHHHHhhcCCCCCCCCC------HHHHHHHHhccc
Q 045790          166 LIVGLWCAHPDRCFRPS------IRQAIQVLNFET  194 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps------~~ell~~l~~~~  194 (231)
                      ..++.+||+.||++|++      +.++++|+++..
T Consensus       233 ~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~  267 (329)
T cd05618         233 ASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN  267 (329)
T ss_pred             HHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCC
Confidence            78999999999999998      589999998854

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.85  E-value=9.1e-22  Score=169.16  Aligned_cols=136  Identities=26%  Similarity=0.353  Sum_probs=105.3

Q ss_pred             eecCCCCCCeeeC-CCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCC--CCCCcccHhHHHHHHHHHhCC
Q 045790            6 YSRSPELPPGRGD-FNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGR--VSKELDVFSFRVVALEIATGR   82 (231)
Q Consensus         6 ~~rdlk~~nil~~-~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~--~~~~~Dv~s~G~vl~el~~g~   82 (231)
                      .|||||-+|||++ -.|.+||+|||-++.+- +-.+.+.++.||..|||||++..++  |..++|||||||++.||.||+
T Consensus       697 VHRDIKGDNVLvNTySGvlKISDFGTsKRLA-ginP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGr  775 (1226)
T KOG4279|consen  697 VHRDIKGDNVLVNTYSGVLKISDFGTSKRLA-GINPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGR  775 (1226)
T ss_pred             eeccccCCcEEEeeccceEEecccccchhhc-cCCccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCC
Confidence            4999999999997 58999999999998764 2345567899999999999997654  889999999999999999999


Q ss_pred             CccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           83 KVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        83 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      +||.....+                                       +...+---.           -..-+..+++..
T Consensus       776 PPF~Elgsp---------------------------------------qAAMFkVGm-----------yKvHP~iPeels  805 (1226)
T KOG4279|consen  776 PPFVELGSP---------------------------------------QAAMFKVGM-----------YKVHPPIPEELS  805 (1226)
T ss_pred             CCeeecCCh---------------------------------------hHhhhhhcc-----------eecCCCCcHHHH
Confidence            999653311                                       111110000           011234556677


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      +....++++|+..||.+||+|.++++.+.-
T Consensus       806 aeak~FilrcFepd~~~R~sA~~LL~DpFl  835 (1226)
T KOG4279|consen  806 AEAKNFILRCFEPDPCDRPSAKDLLQDPFL  835 (1226)
T ss_pred             HHHHHHHHHHcCCCcccCccHHHhccCccc
Confidence            788889999999999999999999987643

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.85  E-value=1.1e-21  Score=161.66  Aligned_cols=138  Identities=20%  Similarity=0.151  Sum_probs=98.4

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCc-eeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPK-TIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~   83 (231)
                      .||||||+||+++.++.+||+|||+++.+....... .....++..|++||.+....++.++||||||+++|++++ |..
T Consensus       131 iH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~  210 (316)
T cd05108         131 VHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK  210 (316)
T ss_pred             eccccchhheEecCCCcEEEccccccccccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCC
Confidence            599999999999999999999999998765322111 111223557999999988889999999999999999987 899


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||.......                                       +....    ...         .....+..+..
T Consensus       211 p~~~~~~~~---------------------------------------~~~~~----~~~---------~~~~~~~~~~~  238 (316)
T cd05108         211 PYDGIPASE---------------------------------------ISSIL----EKG---------ERLPQPPICTI  238 (316)
T ss_pred             CCCCCCHHH---------------------------------------HHHHH----hCC---------CCCCCCCCCCH
Confidence            986533211                                       11100    000         00000111234


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhcccC
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNFETT  195 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~  195 (231)
                      .+..++..||+.+|++||++.+++.++.....
T Consensus       239 ~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~  270 (316)
T cd05108         239 DVYMIMVKCWMIDADSRPKFRELIIEFSKMAR  270 (316)
T ss_pred             HHHHHHHHHccCChhhCcCHHHHHHHHHHHHc
Confidence            56789999999999999999999999876543

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.85  E-value=5.5e-22  Score=164.05  Aligned_cols=135  Identities=19%  Similarity=0.115  Sum_probs=99.9

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+|||++.++.+||+|||+++...... .......|+..|+|||++.+..++.++||||+|+++++|++|+.||
T Consensus       122 vH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf  200 (323)
T cd05584         122 IYRDLKPENILLDAQGHVKLTDFGLCKESIHEG-TVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPF  200 (323)
T ss_pred             ecCCCCHHHeEECCCCCEEEeeCcCCeecccCC-CcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCC
Confidence            599999999999999999999999986532211 1223456889999999998878889999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      ........                                          ........       .    ..+......+
T Consensus       201 ~~~~~~~~------------------------------------------~~~~~~~~-------~----~~~~~~~~~~  227 (323)
T cd05584         201 TAENRKKT------------------------------------------IDKILKGK-------L----NLPPYLTPEA  227 (323)
T ss_pred             CCCCHHHH------------------------------------------HHHHHcCC-------C----CCCCCCCHHH
Confidence            75432111                                          11111000       0    0111122456


Q ss_pred             HHHHHhhcCCCCCCCC-----CHHHHHHHHhccc
Q 045790          166 LIVGLWCAHPDRCFRP-----SIRQAIQVLNFET  194 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rp-----s~~ell~~l~~~~  194 (231)
                      .+++.+||+.||++||     ++.++++|+++..
T Consensus       228 ~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~  261 (323)
T cd05584         228 RDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRH  261 (323)
T ss_pred             HHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCC
Confidence            7899999999999999     8999999998743

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.85  E-value=2.7e-21  Score=146.08  Aligned_cols=134  Identities=14%  Similarity=-0.004  Sum_probs=94.8

Q ss_pred             ecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCccc
Q 045790            7 SRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVIN   86 (231)
Q Consensus         7 ~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~~   86 (231)
                      |..-||+||+++.++.+|+  ||.+.......      ..|+..|+|||++.+..++.++||||+||++|++++|..||.
T Consensus        34 H~~~kp~Nil~~~~~~~~~--fG~~~~~~~~~------~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~  105 (176)
T smart00750       34 HRQAKSGNILLTWDGLLKL--DGSVAFKTPEQ------SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYN  105 (176)
T ss_pred             HhcCCcccEeEcCccceee--ccceEeecccc------CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCcc
Confidence            5556999999999999999  99987754321      257889999999988889999999999999999999999986


Q ss_pred             cchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH--HH
Q 045790           87 RYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM--TC  164 (231)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~  164 (231)
                      .....                                     ...+..+......       ..+... .......  ..
T Consensus       106 ~~~~~-------------------------------------~~~~~~~~~~~~~-------~~~~~~-~~~~~~~~~~~  140 (176)
T smart00750      106 EEREL-------------------------------------SAILEILLNGMPA-------DDPRDR-SNLESVSAARS  140 (176)
T ss_pred             ccchh-------------------------------------cHHHHHHHHHhcc-------CCcccc-ccHHHHHhhhh
Confidence            43210                                     0011111111000       000000 0011111  35


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhcc
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNFE  193 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~~  193 (231)
                      +.+++.+||+.+|++||++.++++|++..
T Consensus       141 ~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~  169 (176)
T smart00750      141 FADFMRVCASRLPQRREAANHYLAHCRAL  169 (176)
T ss_pred             HHHHHHHHHhcccccccCHHHHHHHHHHH
Confidence            88999999999999999999999999864

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.85  E-value=3.8e-22  Score=166.50  Aligned_cols=139  Identities=21%  Similarity=0.148  Sum_probs=100.0

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCC----------------------------CCceeEeeccccccchhhh
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHEL----------------------------GPKTIMLVGTLAYMASEYI   57 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~----------------------------~~~~~~~~g~~~y~aPE~~   57 (231)
                      .||||||+||+++.++.+||+|||++.......                            ........|+..|+|||++
T Consensus       123 iH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  202 (350)
T cd05573         123 IHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVL  202 (350)
T ss_pred             eccCCCHHHeEECCCCCEEeecCCCCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHH
Confidence            599999999999999999999999987654322                            0112345689999999999


Q ss_pred             hhCCCCCCcccHhHHHHHHHHHhCCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHH
Q 045790           58 STGRVSKELDVFSFRVVALEIATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVW  137 (231)
Q Consensus        58 ~~~~~~~~~Dv~s~G~vl~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  137 (231)
                      .+..++.++||||+||++++|++|+.||...........+.                                   .|. 
T Consensus       203 ~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~-----------------------------------~~~-  246 (350)
T cd05573         203 RGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQETYNKII-----------------------------------NWK-  246 (350)
T ss_pred             cCCCCCCceeeEecchhhhhhccCCCCCCCCCHHHHHHHHh-----------------------------------ccC-
Confidence            88889999999999999999999999997543221111110                                   000 


Q ss_pred             HHhhcchhhhhhcccccCcccHHHHHHHHHHHHhhcCCCCCCCCC-HHHHHHHHhccc
Q 045790          138 DLYGERKLLSAANERLDSRFDEQQMTCLLIVGLWCAHPDRCFRPS-IRQAIQVLNFET  194 (231)
Q Consensus       138 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~c~~~dp~~Rps-~~ell~~l~~~~  194 (231)
                                   ..+...........+..++..|+. ||.+|++ +.++++|+++..
T Consensus       247 -------------~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~~~~  290 (350)
T cd05573         247 -------------ESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPFFKG  290 (350)
T ss_pred             -------------CcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCCcCC
Confidence                         000000000013456778888997 9999999 999999998854

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.85  E-value=8e-22  Score=163.15  Aligned_cols=135  Identities=19%  Similarity=0.184  Sum_probs=99.7

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+|||++.++.+||+|||++...... ........|+..|+|||++.+..++.++|+||+||++++|++|+.||
T Consensus       123 vH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf  201 (324)
T cd05587         123 IYRDLKLDNVMLDAEGHIKIADFGMCKENIFG-GKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPF  201 (324)
T ss_pred             EecCCCHHHeEEcCCCCEEEeecCcceecCCC-CCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCC
Confidence            59999999999999999999999998643211 12234567899999999998888999999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      ...........+.                                          . .      ...+    +......+
T Consensus       202 ~~~~~~~~~~~i~------------------------------------------~-~------~~~~----~~~~~~~~  228 (324)
T cd05587         202 DGEDEDELFQSIM------------------------------------------E-H------NVSY----PKSLSKEA  228 (324)
T ss_pred             CCCCHHHHHHHHH------------------------------------------c-C------CCCC----CCCCCHHH
Confidence            7544221111110                                          0 0      0001    11112346


Q ss_pred             HHHHHhhcCCCCCCCCCH-----HHHHHHHhccc
Q 045790          166 LIVGLWCAHPDRCFRPSI-----RQAIQVLNFET  194 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps~-----~ell~~l~~~~  194 (231)
                      .+++.+||+.||.+|+++     .++++|+++..
T Consensus       229 ~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~  262 (324)
T cd05587         229 VSICKGLLTKHPAKRLGCGPTGERDIREHAFFRR  262 (324)
T ss_pred             HHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCC
Confidence            788999999999999976     89999988754

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.85  E-value=1.1e-21  Score=159.02  Aligned_cols=151  Identities=20%  Similarity=0.184  Sum_probs=98.8

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCc--eeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPK--TIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~   83 (231)
                      .||||||+||+++.++.++|+|||+++.........  .....++..|++||.+....++.++||||+|++++++++|..
T Consensus       129 ~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~  208 (283)
T cd05080         129 IHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCD  208 (283)
T ss_pred             eccccChheEEEcCCCcEEEeecccccccCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCC
Confidence            599999999999999999999999987654322111  111234557999999987888999999999999999999999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      |+...... . ......                       .  ........          .....+.......+.....
T Consensus       209 p~~~~~~~-~-~~~~~~-----------------------~--~~~~~~~~----------~~~~~~~~~~~~~~~~~~~  251 (283)
T cd05080         209 SKQSPPKK-F-EEMIGP-----------------------K--QGQMTVVR----------LIELLERGMRLPCPKNCPQ  251 (283)
T ss_pred             CCCCCcch-h-hhhhcc-----------------------c--ccccchhh----------hhhhhhcCCCCCCCCCCCH
Confidence            87542210 0 000000                       0  00000000          0001111111111222345


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhcc
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNFE  193 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~~  193 (231)
                      .+.+++..||+.+|++|||+.+|++.|+..
T Consensus       252 ~~~~li~~cl~~~p~~Rps~~~i~~~l~~~  281 (283)
T cd05080         252 EVYILMKNCWETEAKFRPTFRSLIPILKEM  281 (283)
T ss_pred             HHHHHHHHHhccChhhCCCHHHHHHHHHHh
Confidence            688899999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.85  E-value=1.5e-21  Score=159.88  Aligned_cols=141  Identities=19%  Similarity=0.157  Sum_probs=95.8

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCc-eeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh--CC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPK-TIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT--GR   82 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~--g~   82 (231)
                      .||||||+|||++.++.+||+|||+++.+....... .....++..|+|||++....++.++||||+|++++++++  +.
T Consensus       160 vH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~  239 (304)
T cd05096         160 VHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKE  239 (304)
T ss_pred             cccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCC
Confidence            499999999999999999999999987654322111 122334678999999988889999999999999999986  45


Q ss_pred             CccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           83 KVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        83 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      .||......                                       .+...+..........      .....+..+.
T Consensus       240 ~p~~~~~~~---------------------------------------~~~~~~~~~~~~~~~~------~~~~~~~~~~  274 (304)
T cd05096         240 QPYGELTDE---------------------------------------QVIENAGEFFRDQGRQ------VYLFRPPPCP  274 (304)
T ss_pred             CCCCcCCHH---------------------------------------HHHHHHHHHhhhcccc------ccccCCCCCC
Confidence            666543211                                       1111111111111000      0000111223


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHh
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLN  191 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~  191 (231)
                      ..+.+++.+||+.||++|||+.+|.+.|+
T Consensus       275 ~~~~~li~~cl~~~p~~RPs~~~i~~~l~  303 (304)
T cd05096         275 QGLYELMLQCWSRDCRERPSFSDIHAFLT  303 (304)
T ss_pred             HHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence            46788999999999999999999998875

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.85  E-value=8.1e-22  Score=162.74  Aligned_cols=135  Identities=17%  Similarity=0.118  Sum_probs=100.7

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+||+++.++.+||+|||+++..... ........|+..|+|||++.+..++.++|+||+||+++++++|+.||
T Consensus       118 vH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf  196 (318)
T cd05570         118 IYRDLKLDNVLLDSEGHIKIADFGMCKEGILG-GVTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPF  196 (318)
T ss_pred             EccCCCHHHeEECCCCcEEecccCCCeecCcC-CCcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCC
Confidence            59999999999999999999999998653211 12223456889999999998888999999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      ...........+                                          .. ..      ..    ++......+
T Consensus       197 ~~~~~~~~~~~i------------------------------------------~~-~~------~~----~~~~~~~~~  223 (318)
T cd05570         197 EGDDEDELFQSI------------------------------------------LE-DE------VR----YPRWLSKEA  223 (318)
T ss_pred             CCCCHHHHHHHH------------------------------------------Hc-CC------CC----CCCcCCHHH
Confidence            654322111111                                          00 00      00    111122456


Q ss_pred             HHHHHhhcCCCCCCCCCH-----HHHHHHHhccc
Q 045790          166 LIVGLWCAHPDRCFRPSI-----RQAIQVLNFET  194 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps~-----~ell~~l~~~~  194 (231)
                      .+++.+||+.||++|||+     .+++.|.++..
T Consensus       224 ~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~  257 (318)
T cd05570         224 KSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFRE  257 (318)
T ss_pred             HHHHHHHccCCHHHcCCCCCCCHHHHhcCCCcCC
Confidence            789999999999999999     99999988854

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.85  E-value=1.6e-21  Score=156.11  Aligned_cols=135  Identities=19%  Similarity=0.148  Sum_probs=97.1

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~p   84 (231)
                      .||||||+||+++.++.++|+|||++...............++..|+|||.+....++.++|+||+|++++++++ |..|
T Consensus       125 ~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p  204 (261)
T cd05072         125 IHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIP  204 (261)
T ss_pred             eccccchhhEEecCCCcEEECCCccceecCCCceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCC
Confidence            599999999999999999999999997764322111122234567999999988888899999999999999998 8999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |.......                                       ....+.+    .     .......    .....
T Consensus       205 ~~~~~~~~---------------------------------------~~~~~~~----~-----~~~~~~~----~~~~~  232 (261)
T cd05072         205 YPGMSNSD---------------------------------------VMSALQR----G-----YRMPRME----NCPDE  232 (261)
T ss_pred             CCCCCHHH---------------------------------------HHHHHHc----C-----CCCCCCC----CCCHH
Confidence            86433211                                       1111100    0     0000001    12245


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      +.+++.+||+.+|++||++.++++.|+.
T Consensus       233 ~~~li~~~l~~~p~~Rp~~~~i~~~l~~  260 (261)
T cd05072         233 LYDIMKTCWKEKAEERPTFDYLQSVLDD  260 (261)
T ss_pred             HHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence            6789999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.85  E-value=2.2e-21  Score=155.20  Aligned_cols=135  Identities=17%  Similarity=0.100  Sum_probs=96.8

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCce--eEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKT--IMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GR   82 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~--~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~   82 (231)
                      +||||||.||+++.++.+||+|||++..+........  ....++..|+|||.+....++.++|+||+|++++++++ |.
T Consensus       117 ~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~  196 (257)
T cd05116         117 VHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQ  196 (257)
T ss_pred             eecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCC
Confidence            5999999999999999999999999977643322111  11223468999999877778889999999999999997 99


Q ss_pred             CccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           83 KVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        83 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      .||......                                       .+...+.    ..         .....+....
T Consensus       197 ~p~~~~~~~---------------------------------------~~~~~i~----~~---------~~~~~~~~~~  224 (257)
T cd05116         197 KPYKGMKGN---------------------------------------EVTQMIE----SG---------ERMECPQRCP  224 (257)
T ss_pred             CCCCCCCHH---------------------------------------HHHHHHH----CC---------CCCCCCCCCC
Confidence            999654321                                       1111110    00         0001111223


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      ..+.+++.+||+.||++||++.+|...|..
T Consensus       225 ~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~  254 (257)
T cd05116         225 PEMYDLMKLCWTYGVDERPGFAVVELRLRN  254 (257)
T ss_pred             HHHHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence            456789999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.85  E-value=5.4e-22  Score=164.15  Aligned_cols=135  Identities=19%  Similarity=0.163  Sum_probs=99.8

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+|||++.++.+||+|||++...... ........|+..|+|||++.+..++.++|+||+||+++++++|+.||
T Consensus       117 vH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf  195 (323)
T cd05595         117 VYRDIKLENLMLDKDGHIKITDFGLCKEGISD-GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF  195 (323)
T ss_pred             EecCCCHHHEEEcCCCCEEecccHHhccccCC-CCccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCC
Confidence            59999999999999999999999998653211 11223456889999999998888999999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      ...........+                                          .. .      ...+    +......+
T Consensus       196 ~~~~~~~~~~~~------------------------------------------~~-~------~~~~----p~~~~~~~  222 (323)
T cd05595         196 YNQDHERLFELI------------------------------------------LM-E------EIRF----PRTLSPEA  222 (323)
T ss_pred             CCCCHHHHHHHH------------------------------------------hc-C------CCCC----CCCCCHHH
Confidence            654322111110                                          00 0      0001    11122456


Q ss_pred             HHHHHhhcCCCCCCCC-----CHHHHHHHHhccc
Q 045790          166 LIVGLWCAHPDRCFRP-----SIRQAIQVLNFET  194 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rp-----s~~ell~~l~~~~  194 (231)
                      .+++.+||+.||++|+     ++.++++|.++..
T Consensus       223 ~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~  256 (323)
T cd05595         223 KSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLS  256 (323)
T ss_pred             HHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcCC
Confidence            7889999999999998     8999999998854

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.85  E-value=1.4e-21  Score=161.20  Aligned_cols=135  Identities=19%  Similarity=0.130  Sum_probs=99.0

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+||+++.++.+||+|||++...... ........|+..|+|||++.+..++.++|+||+||++|++++|..||
T Consensus       118 vHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf  196 (316)
T cd05619         118 VYRDLKLDNILLDTDGHIKIADFGMCKENMLG-DAKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPF  196 (316)
T ss_pred             EeCCCCHHHEEECCCCCEEEccCCcceECCCC-CCceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCC
Confidence            59999999999999999999999998653221 12234467899999999998888999999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      ...........+                                          ..       ..+....    .....+
T Consensus       197 ~~~~~~~~~~~i------------------------------------------~~-------~~~~~~~----~~~~~~  223 (316)
T cd05619         197 HGHDEEELFQSI------------------------------------------RM-------DNPCYPR----WLTREA  223 (316)
T ss_pred             CCCCHHHHHHHH------------------------------------------Hh-------CCCCCCc----cCCHHH
Confidence            654322111100                                          00       0011111    112345


Q ss_pred             HHHHHhhcCCCCCCCCCHH-HHHHHHhccc
Q 045790          166 LIVGLWCAHPDRCFRPSIR-QAIQVLNFET  194 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps~~-ell~~l~~~~  194 (231)
                      .+++.+||+.||++|+++. ++++|+++..
T Consensus       224 ~~li~~~l~~~P~~R~~~~~~l~~h~~~~~  253 (316)
T cd05619         224 KDILVKLFVREPERRLGVKGDIRQHPFFRE  253 (316)
T ss_pred             HHHHHHHhccCHhhcCCChHHHHcCcccCC
Confidence            6788999999999999996 8888888744

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=99.85  E-value=1.2e-21  Score=165.89  Aligned_cols=142  Identities=22%  Similarity=0.161  Sum_probs=100.5

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCC-CCCceeEeeccccccchhhhhh---CCCCCCcccHhHHHHHHHHHhC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHE-LGPKTIMLVGTLAYMASEYIST---GRVSKELDVFSFRVVALEIATG   81 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~~g~~~y~aPE~~~~---~~~~~~~Dv~s~G~vl~el~~g   81 (231)
                      .|||||..||++.+++.|||+|||++..-.-- .........|+..|||||+++-   .+|++.+||||||||+|||++|
T Consensus       510 IHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg  589 (678)
T KOG0193|consen  510 IHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTG  589 (678)
T ss_pred             hhhhccccceEEccCCcEEEecccceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhC
Confidence            49999999999999999999999998542211 1111233467889999999963   4689999999999999999999


Q ss_pred             CCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHH
Q 045790           82 RKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQ  161 (231)
Q Consensus        82 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  161 (231)
                      ..||.....++++-..-                                       +        ...-+.+ ......+
T Consensus       590 ~lPysi~~~dqIifmVG---------------------------------------r--------G~l~pd~-s~~~s~~  621 (678)
T KOG0193|consen  590 ELPYSIQNRDQIIFMVG---------------------------------------R--------GYLMPDL-SKIRSNC  621 (678)
T ss_pred             cCCcCCCChhheEEEec---------------------------------------c--------cccCccc-hhhhccC
Confidence            99998433321110000                                       0        0000000 0112245


Q ss_pred             HHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccC
Q 045790          162 MTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETT  195 (231)
Q Consensus       162 ~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~  195 (231)
                      .+++.+|+..||.+++++||.+.+|+..|.....
T Consensus       622 pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~  655 (678)
T KOG0193|consen  622 PKAMKRLLSDCWKFDREERPLFPQLLSKLEELLP  655 (678)
T ss_pred             HHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence            5678889999999999999999999997776543

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=99.85  E-value=1.1e-21  Score=153.56  Aligned_cols=83  Identities=25%  Similarity=0.292  Sum_probs=75.0

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      ..|||||+|||+|.+|.+||+|||+++....    .+.+.+||+-|+|||++...+++.++|.|++|+++|||+.|.+||
T Consensus       166 iYRDLKPENiLlD~~G~iKitDFGFAK~v~~----rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF  241 (355)
T KOG0616|consen  166 IYRDLKPENLLLDQNGHIKITDFGFAKRVSG----RTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPF  241 (355)
T ss_pred             eeccCChHHeeeccCCcEEEEeccceEEecC----cEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCC
Confidence            3699999999999999999999999988653    367789999999999999999999999999999999999999999


Q ss_pred             ccchhhh
Q 045790           86 NRYKAQK   92 (231)
Q Consensus        86 ~~~~~~~   92 (231)
                      ....+..
T Consensus       242 ~~~~~~~  248 (355)
T KOG0616|consen  242 YDDNPIQ  248 (355)
T ss_pred             cCCChHH
Confidence            8766543

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.85  E-value=3.1e-21  Score=155.23  Aligned_cols=135  Identities=18%  Similarity=0.180  Sum_probs=97.4

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCc-eeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPK-TIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~   83 (231)
                      .||||||+||+++.++.+||+|||+++......... .....++..|++||++....++.++||||+|++++|+++ |..
T Consensus       135 ~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~  214 (273)
T cd05035         135 IHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQT  214 (273)
T ss_pred             eccccchheEEECCCCeEEECCccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCC
Confidence            699999999999999999999999987654322111 111234567999999877788999999999999999998 888


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||......                                       .+..+...   ..          ....+.....
T Consensus       215 p~~~~~~~---------------------------------------~~~~~~~~---~~----------~~~~~~~~~~  242 (273)
T cd05035         215 PYPGVENH---------------------------------------EIYDYLRH---GN----------RLKQPEDCLD  242 (273)
T ss_pred             CCCCCCHH---------------------------------------HHHHHHHc---CC----------CCCCCcCCCH
Confidence            88643321                                       11111110   00          0011122345


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      .+.+++.+||+.||++|||+.+++.+|..
T Consensus       243 ~~~~li~~~l~~~p~~Rp~~~e~~~~l~~  271 (273)
T cd05035         243 ELYDLMYSCWRADPKDRPTFTKLREVLEN  271 (273)
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHHHHh
Confidence            67889999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.85  E-value=7.8e-22  Score=163.14  Aligned_cols=134  Identities=19%  Similarity=0.188  Sum_probs=99.0

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+|||++.++.+||+|||+++..... ........|++.|+|||++.+..++.++|+||+||++|+|++|+.||
T Consensus       123 vHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf  201 (323)
T cd05616         123 IYRDLKLDNVMLDSEGHIKIADFGMCKENMWD-GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPF  201 (323)
T ss_pred             EecCCCHHHeEECCCCcEEEccCCCceecCCC-CCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCC
Confidence            59999999999999999999999998753211 11223456899999999998888999999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      ...........+.                                          . ..      .    .++......+
T Consensus       202 ~~~~~~~~~~~i~------------------------------------------~-~~------~----~~p~~~s~~~  228 (323)
T cd05616         202 EGEDEDELFQSIM------------------------------------------E-HN------V----AYPKSMSKEA  228 (323)
T ss_pred             CCCCHHHHHHHHH------------------------------------------h-CC------C----CCCCcCCHHH
Confidence            7544321111110                                          0 00      0    0111123456


Q ss_pred             HHHHHhhcCCCCCCCCC-----HHHHHHHHhcc
Q 045790          166 LIVGLWCAHPDRCFRPS-----IRQAIQVLNFE  193 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps-----~~ell~~l~~~  193 (231)
                      .+++.+|++.+|++|++     ..++++|.++.
T Consensus       229 ~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~  261 (323)
T cd05616         229 VAICKGLMTKHPGKRLGCGPEGERDIKEHAFFR  261 (323)
T ss_pred             HHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcC
Confidence            78899999999999998     48898887764

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.85  E-value=2.4e-21  Score=162.16  Aligned_cols=171  Identities=15%  Similarity=0.052  Sum_probs=107.4

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+||+++.++.+||+|||+++......  ......++..|+|||.+.+..++.++||||+|+++++|++|+.||
T Consensus       140 ~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf  217 (353)
T cd07850         140 IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLF  217 (353)
T ss_pred             eeCCCCHHHEEECCCCCEEEccCccceeCCCCC--CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCC
Confidence            599999999999999999999999997654321  122345678899999998888999999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhc--chhhhhhcccc----cCcccH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGE--RKLLSAANERL----DSRFDE  159 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l----~~~~~~  159 (231)
                      ...........+..............+..                ....+..+....  ...........    ......
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (353)
T cd07850         218 PGTDHIDQWNKIIEQLGTPSDEFMSRLQP----------------TVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNK  281 (353)
T ss_pred             CCCCHHHHHHHHHHhcCCCCHHHHHHhhh----------------hhhHHhhcCCCCCCcchhhhCcccccCcccccccc
Confidence            76554333333322211111111000000                000000000000  00001111100    000011


Q ss_pred             HHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          160 QQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       160 ~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      .....+.+++.+||+.||++|||+.|+++|.++..
T Consensus       282 ~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~~  316 (353)
T cd07850         282 LKASQARDLLSKMLVIDPEKRISVDDALQHPYINV  316 (353)
T ss_pred             cchhHHHHHHHHHcCCChhhCcCHHHHhcChhHhh
Confidence            23455778999999999999999999999998754

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.85  E-value=3e-21  Score=154.66  Aligned_cols=135  Identities=22%  Similarity=0.143  Sum_probs=96.6

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~p   84 (231)
                      .||||||+||+++.++.++|+|||++...................|++||++....++.++|+||+|++++++++ |+.|
T Consensus       125 ~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p  204 (261)
T cd05068         125 IHRDLAARNVLVGENNICKVADFGLARVIKEDIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMP  204 (261)
T ss_pred             eeccCCcceEEEcCCCCEEECCcceEEEccCCcccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCC
Confidence            599999999999999999999999998765321111111122357999999887788999999999999999998 9999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |...........+.                                                    .......+......
T Consensus       205 ~~~~~~~~~~~~~~----------------------------------------------------~~~~~~~~~~~~~~  232 (261)
T cd05068         205 YPGMTNAEVLQQVD----------------------------------------------------QGYRMPCPPGCPKE  232 (261)
T ss_pred             CCCCCHHHHHHHHH----------------------------------------------------cCCCCCCCCcCCHH
Confidence            86533211111000                                                    00000111122356


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      +.+++.+|++.+|++||++.+|+..|+.
T Consensus       233 ~~~li~~~l~~~P~~Rp~~~~l~~~l~~  260 (261)
T cd05068         233 LYDIMLDCWKEDPDDRPTFETLQWKLED  260 (261)
T ss_pred             HHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence            7889999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.85  E-value=2.4e-21  Score=163.16  Aligned_cols=84  Identities=24%  Similarity=0.207  Sum_probs=69.9

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhC----CCCCCcccHhHHHHHHHHHhC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTG----RVSKELDVFSFRVVALEIATG   81 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~----~~~~~~Dv~s~G~vl~el~~g   81 (231)
                      .||||||+|||++.++.+||+|||++...............|+..|+|||++...    .++.++|+||+||++++|++|
T Consensus       164 vHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G  243 (370)
T cd05621         164 IHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG  243 (370)
T ss_pred             EecCCCHHHEEECCCCCEEEEecccceecccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhC
Confidence            5999999999999999999999999987643322233456789999999998653    267899999999999999999


Q ss_pred             CCccccch
Q 045790           82 RKVINRYK   89 (231)
Q Consensus        82 ~~p~~~~~   89 (231)
                      ..||....
T Consensus       244 ~~Pf~~~~  251 (370)
T cd05621         244 DTPFYADS  251 (370)
T ss_pred             CCCCCCCC
Confidence            99997543

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.85  E-value=2.2e-21  Score=156.19  Aligned_cols=135  Identities=20%  Similarity=0.152  Sum_probs=97.0

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCc-eeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPK-TIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~   83 (231)
                      .||||||+||+++.++.++|+|||+++......... .....++..|++||...+..++.++|+||+|+++|++++ |..
T Consensus       134 ~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~  213 (272)
T cd05075         134 IHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQT  213 (272)
T ss_pred             eccccchhheEEcCCCCEEECCCCcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCC
Confidence            599999999999999999999999998764322111 112234567999999988888999999999999999998 788


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||.........                                       .   ... .....         ........
T Consensus       214 p~~~~~~~~~~---------------------------------------~---~~~-~~~~~---------~~~~~~~~  241 (272)
T cd05075         214 PYPGVENSEIY---------------------------------------D---YLR-QGNRL---------KQPPDCLD  241 (272)
T ss_pred             CCCCCCHHHHH---------------------------------------H---HHH-cCCCC---------CCCCCCCH
Confidence            88653321111                                       1   000 00000         00111234


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      .+.+++.+||+.+|++|||+.+|++.|..
T Consensus       242 ~~~~li~~~l~~~p~~Rps~~~l~~~l~~  270 (272)
T cd05075         242 GLYSLMSSCWLLNPKDRPSFETLRCELEK  270 (272)
T ss_pred             HHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence            56889999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.85  E-value=1.6e-21  Score=157.03  Aligned_cols=135  Identities=20%  Similarity=0.199  Sum_probs=96.1

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhh-----hCCCCCCcccHhHHHHHHHHHh
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIS-----TGRVSKELDVFSFRVVALEIAT   80 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~Dv~s~G~vl~el~~   80 (231)
                      .|||||++||+++.++.++|+|||++....... .......|+..|++||++.     ...++.++|+||+|+++|++++
T Consensus       133 vh~dl~~~nili~~~~~~~l~Dfg~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~  211 (272)
T cd06637         133 IHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTV-GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAE  211 (272)
T ss_pred             ccCCCCHHHEEECCCCCEEEccCCCceeccccc-ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHh
Confidence            599999999999999999999999987653221 1223456788999999985     2357788999999999999999


Q ss_pred             CCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHH
Q 045790           81 GRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQ  160 (231)
Q Consensus        81 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  160 (231)
                      |+.||......                                         .... ... ...     .+..   ....
T Consensus       212 g~~p~~~~~~~-----------------------------------------~~~~-~~~-~~~-----~~~~---~~~~  240 (272)
T cd06637         212 GAPPLCDMHPM-----------------------------------------RALF-LIP-RNP-----APRL---KSKK  240 (272)
T ss_pred             CCCCccccCHH-----------------------------------------HHHH-HHh-cCC-----CCCC---CCCC
Confidence            99998643211                                         0000 000 000     0000   0011


Q ss_pred             HHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          161 QMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       161 ~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      ....+.+++.+||+.+|++|||+.+++.|.++
T Consensus       241 ~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~  272 (272)
T cd06637         241 WSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI  272 (272)
T ss_pred             cCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence            22356789999999999999999999999874

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.85  E-value=3.4e-21  Score=154.23  Aligned_cols=135  Identities=21%  Similarity=0.184  Sum_probs=97.2

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~p   84 (231)
                      .||||||.||+++.++.++|+|||++..+............++..|+|||.+....++.++|+||+|++++++++ |..|
T Consensus       124 ~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p  203 (260)
T cd05070         124 IHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVP  203 (260)
T ss_pred             ccCCCccceEEEeCCceEEeCCceeeeeccCcccccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCC
Confidence            499999999999999999999999997654322111122234567999999877788999999999999999998 8888


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |......+                                       ......             .......+......
T Consensus       204 ~~~~~~~~---------------------------------------~~~~~~-------------~~~~~~~~~~~~~~  231 (260)
T cd05070         204 YPGMNNRE---------------------------------------VLEQVE-------------RGYRMPCPQDCPIS  231 (260)
T ss_pred             CCCCCHHH---------------------------------------HHHHHH-------------cCCCCCCCCcCCHH
Confidence            86533211                                       111110             00000111122345


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      +.+++.+|++.+|++|||+.++.+.|++
T Consensus       232 ~~~li~~~l~~~p~~Rpt~~~l~~~l~~  259 (260)
T cd05070         232 LHELMLQCWKKDPEERPTFEYLQSFLED  259 (260)
T ss_pred             HHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence            7889999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.85  E-value=1.1e-21  Score=163.48  Aligned_cols=133  Identities=17%  Similarity=0.085  Sum_probs=100.1

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+|||++.++.+||+|||++......    .....|++.|+|||++.+..++.++|+||+||++++|++|..||
T Consensus       153 vHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf  228 (340)
T PTZ00426        153 VYRDLKPENLLLDKDGFIKMTDFGFAKVVDTR----TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPF  228 (340)
T ss_pred             EccCCCHHHEEECCCCCEEEecCCCCeecCCC----cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCC
Confidence            59999999999999999999999999765421    23457899999999998878899999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      ...........+                                          .. ..      ..+....    ...+
T Consensus       229 ~~~~~~~~~~~i------------------------------------------~~-~~------~~~p~~~----~~~~  255 (340)
T PTZ00426        229 YANEPLLIYQKI------------------------------------------LE-GI------IYFPKFL----DNNC  255 (340)
T ss_pred             CCCCHHHHHHHH------------------------------------------hc-CC------CCCCCCC----CHHH
Confidence            754321111110                                          00 00      0011111    2335


Q ss_pred             HHHHHhhcCCCCCCCC-----CHHHHHHHHhcccC
Q 045790          166 LIVGLWCAHPDRCFRP-----SIRQAIQVLNFETT  195 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rp-----s~~ell~~l~~~~~  195 (231)
                      ..++.+|++.||++|+     ++.++++|+++...
T Consensus       256 ~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~~  290 (340)
T PTZ00426        256 KHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGNI  290 (340)
T ss_pred             HHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence            6789999999999995     99999999998653

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.85  E-value=1.6e-21  Score=158.03  Aligned_cols=139  Identities=17%  Similarity=0.091  Sum_probs=101.4

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+||+++.++.++|+|||++........ ......|+..|+|||++.+..++.++|+||+|++++++++|+.||
T Consensus       119 ~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf  197 (280)
T cd05608         119 IYRDLKPENVLLDNDGNVRISDLGLAVELKDGQS-KTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPF  197 (280)
T ss_pred             ccCCCCHHHEEECCCCCEEEeeCccceecCCCCc-cccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCC
Confidence            5999999999999999999999999876543221 123356888999999998888999999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      ......                                      ...........         ...  ..++......+
T Consensus       198 ~~~~~~--------------------------------------~~~~~~~~~~~---------~~~--~~~~~~~~~~~  228 (280)
T cd05608         198 RARGEK--------------------------------------VENKELKQRIL---------NDS--VTYPDKFSPAS  228 (280)
T ss_pred             CCCCcc--------------------------------------hhHHHHHHhhc---------ccC--CCCcccCCHHH
Confidence            643210                                      00000000000         000  01111223456


Q ss_pred             HHHHHhhcCCCCCCCC-----CHHHHHHHHhccc
Q 045790          166 LIVGLWCAHPDRCFRP-----SIRQAIQVLNFET  194 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rp-----s~~ell~~l~~~~  194 (231)
                      .+++..||+.||++||     ++.++++|+++..
T Consensus       229 ~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~  262 (280)
T cd05608         229 KSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRD  262 (280)
T ss_pred             HHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhhc
Confidence            7889999999999999     8999999999866

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.85  E-value=2e-21  Score=158.16  Aligned_cols=136  Identities=23%  Similarity=0.168  Sum_probs=97.4

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCc-eeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPK-TIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~   83 (231)
                      .||||||.||+++.++.+||+|||+++.+....... .....++..|++||.+.+..++.++||||+||++|++++ |..
T Consensus       154 vH~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~  233 (293)
T cd05053         154 IHRDLAARNVLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGS  233 (293)
T ss_pred             cccccceeeEEEcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCC
Confidence            599999999999999999999999998654321111 111234567999999877788999999999999999997 888


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||......+.                                       ....   .          .......+.....
T Consensus       234 p~~~~~~~~~---------------------------------------~~~~---~----------~~~~~~~~~~~~~  261 (293)
T cd05053         234 PYPGIPVEEL---------------------------------------FKLL---K----------EGYRMEKPQNCTQ  261 (293)
T ss_pred             CCCCCCHHHH---------------------------------------HHHH---H----------cCCcCCCCCCCCH
Confidence            8864332110                                       0000   0          0000111122234


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhcc
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNFE  193 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~~  193 (231)
                      .+.+++.+||+.+|++|||+.++++.|...
T Consensus       262 ~~~~li~~~l~~~p~~Rps~~eil~~l~~~  291 (293)
T cd05053         262 ELYHLMRDCWHEVPSQRPTFKQLVEDLDRM  291 (293)
T ss_pred             HHHHHHHHHcccCcccCcCHHHHHHHHHHh
Confidence            678899999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.84  E-value=3.3e-21  Score=155.79  Aligned_cols=134  Identities=21%  Similarity=0.210  Sum_probs=96.8

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCC-ceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGP-KTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~   83 (231)
                      .||||||+||+++.++.++|+|||++......... ......++..|+|||++.+..++.++||||+|++++++++ |..
T Consensus       144 ~h~dlkp~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~  223 (280)
T cd05049         144 VHRDLATRNCLVGYDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQ  223 (280)
T ss_pred             eccccccceEEEcCCCeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCC
Confidence            49999999999999999999999998754322111 1122334668999999988889999999999999999998 999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||......                                       .......    ....         ...+.....
T Consensus       224 p~~~~~~~---------------------------------------~~~~~~~----~~~~---------~~~~~~~~~  251 (280)
T cd05049         224 PWYGLSNE---------------------------------------EVIECIT----QGRL---------LQRPRTCPS  251 (280)
T ss_pred             CCCCCCHH---------------------------------------HHHHHHH----cCCc---------CCCCCCCCH
Confidence            98643322                                       1111110    0000         001112234


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHh
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLN  191 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~  191 (231)
                      .+.+++.+||+.||++||++.|+++.|.
T Consensus       252 ~~~~li~~~l~~~p~~Rp~~~eil~~l~  279 (280)
T cd05049         252 EVYDIMLGCWKRDPQQRINIKDIHERLQ  279 (280)
T ss_pred             HHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence            5788999999999999999999999885

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.84  E-value=1.3e-21  Score=162.22  Aligned_cols=139  Identities=21%  Similarity=0.150  Sum_probs=98.0

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhh------hCCCCCCcccHhHHHHHHHHH
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIS------TGRVSKELDVFSFRVVALEIA   79 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~------~~~~~~~~Dv~s~G~vl~el~   79 (231)
                      .||||||+||+++.++.+||+|||++..+............|+..|+|||++.      ...++.++||||+||++++|+
T Consensus       124 ~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~  203 (330)
T cd05601         124 VHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMI  203 (330)
T ss_pred             EcccCchHheEECCCCCEEeccCCCCeECCCCCceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeec
Confidence            59999999999999999999999999776533222233456889999999986      345778999999999999999


Q ss_pred             hCCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccH
Q 045790           80 TGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDE  159 (231)
Q Consensus        80 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  159 (231)
                      +|..||........                                          .............  +   .  ..
T Consensus       204 ~g~~Pf~~~~~~~~------------------------------------------~~~i~~~~~~~~~--~---~--~~  234 (330)
T cd05601         204 YGRSPFHEGTSAKT------------------------------------------YNNIMNFQRFLKF--P---E--DP  234 (330)
T ss_pred             cCCCCCCCCCHHHH------------------------------------------HHHHHcCCCccCC--C---C--CC
Confidence            99999965432211                                          1111100000000  0   0  00


Q ss_pred             HHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          160 QQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       160 ~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      .....+..++..|++ +|.+|||+.++++|+++..
T Consensus       235 ~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~~~~~  268 (330)
T cd05601         235 KVSSDFLDLIQSLLC-GQKERLGYEGLCCHPFFSK  268 (330)
T ss_pred             CCCHHHHHHHHHHcc-ChhhCCCHHHHhCCCCcCC
Confidence            112345677788887 9999999999999998754

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.84  E-value=1.3e-21  Score=164.78  Aligned_cols=140  Identities=17%  Similarity=0.074  Sum_probs=99.2

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhC----CCCCCcccHhHHHHHHHHHhC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTG----RVSKELDVFSFRVVALEIATG   81 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~----~~~~~~Dv~s~G~vl~el~~g   81 (231)
                      .||||||+|||++.++.+||+|||++...............|++.|+|||++...    .++.++|+||+||++++|++|
T Consensus       164 vHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG  243 (370)
T cd05596         164 IHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG  243 (370)
T ss_pred             eccCCCHHHEEEcCCCCEEEEeccceeeccCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhC
Confidence            5999999999999999999999999876543222223345789999999998643    378899999999999999999


Q ss_pred             CCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHH
Q 045790           82 RKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQ  161 (231)
Q Consensus        82 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  161 (231)
                      +.||...........+                                          ....       ..+.-......
T Consensus       244 ~~Pf~~~~~~~~~~~i------------------------------------------~~~~-------~~~~~~~~~~~  274 (370)
T cd05596         244 DTPFYADSLVGTYSKI------------------------------------------MDHK-------NSLTFPDDIEI  274 (370)
T ss_pred             CCCcCCCCHHHHHHHH------------------------------------------HcCC-------CcCCCCCcCCC
Confidence            9999754321111111                                          0000       00000000011


Q ss_pred             HHHHHHHHHhhcCCCCCC--CCCHHHHHHHHhccc
Q 045790          162 MTCLLIVGLWCAHPDRCF--RPSIRQAIQVLNFET  194 (231)
Q Consensus       162 ~~~~~~l~~~c~~~dp~~--Rps~~ell~~l~~~~  194 (231)
                      ...+.+++..|++.+|++  |+|+.++++|+++..
T Consensus       275 s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~~~~  309 (370)
T cd05596         275 SKQAKDLICAFLTDREVRLGRNGVDEIKSHPFFKN  309 (370)
T ss_pred             CHHHHHHHHHHccChhhccCCCCHHHHhcCcccCC
Confidence            245567889999988987  999999999998864

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.84  E-value=1.8e-21  Score=161.40  Aligned_cols=144  Identities=19%  Similarity=0.166  Sum_probs=101.9

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+||+++.++.+||+|||+++.... .........|+..|+|||++.+..++.++|+||+||++|++++|+.||
T Consensus       118 vH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf  196 (329)
T cd05588         118 IYRDLKLDNVLLDAEGHIKLTDYGMCKEGIR-PGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF  196 (329)
T ss_pred             EecCCCHHHeEECCCCCEEECcCcccccccc-CCCccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCc
Confidence            5999999999999999999999999864221 112233457899999999998888999999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      ......                                  .........+..+.......      .+..    .....+
T Consensus       197 ~~~~~~----------------------------------~~~~~~~~~~~~~~~~~~~~------~~p~----~~~~~~  232 (329)
T cd05588         197 DIVGMS----------------------------------DNPDQNTEDYLFQVILEKQI------RIPR----SLSVKA  232 (329)
T ss_pred             cccccc----------------------------------ccccccchHHHHHHHHcCCC------CCCC----CCCHHH
Confidence            632210                                  00011112222222211110      1111    123456


Q ss_pred             HHHHHhhcCCCCCCCCC------HHHHHHHHhccc
Q 045790          166 LIVGLWCAHPDRCFRPS------IRQAIQVLNFET  194 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps------~~ell~~l~~~~  194 (231)
                      ..++.+||+.||.+|++      +.++++|+++..
T Consensus       233 ~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~  267 (329)
T cd05588         233 SSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRN  267 (329)
T ss_pred             HHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCC
Confidence            78999999999999987      799999999854

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.84  E-value=3.5e-21  Score=154.86  Aligned_cols=135  Identities=18%  Similarity=0.131  Sum_probs=95.4

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~p   84 (231)
                      .||||||+||+++.++.++++|||.+...............++..|+|||.+.+..++.++||||+|+++|++++ |..|
T Consensus       129 iH~dikp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p  208 (266)
T cd05064         129 VHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERP  208 (266)
T ss_pred             eeccccHhhEEEcCCCcEEECCCcccccccccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCC
Confidence            599999999999999999999999875532211111112234568999999988889999999999999999775 9999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |...........+.                                           ..         .....+......
T Consensus       209 ~~~~~~~~~~~~~~-------------------------------------------~~---------~~~~~~~~~~~~  236 (266)
T cd05064         209 YWDMSGQDVIKAVE-------------------------------------------DG---------FRLPAPRNCPNL  236 (266)
T ss_pred             cCcCCHHHHHHHHH-------------------------------------------CC---------CCCCCCCCCCHH
Confidence            97544221111100                                           00         000011122345


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      +.+++..||+.+|++||++.+|++.|..
T Consensus       237 ~~~li~~c~~~~p~~RP~~~~i~~~l~~  264 (266)
T cd05064         237 LHQLMLDCWQKERGERPRFSQIHSILSK  264 (266)
T ss_pred             HHHHHHHHcCCCchhCCCHHHHHHHHHh
Confidence            7788999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.84  E-value=2.9e-21  Score=156.13  Aligned_cols=134  Identities=22%  Similarity=0.243  Sum_probs=95.5

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCc-eeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPK-TIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~   83 (231)
                      .||||||+||+++.++.++|+|||++.......... .....++..|+|||++.+..++.++|+||+|++++++++ |..
T Consensus       141 vH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~  220 (277)
T cd05062         141 VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQ  220 (277)
T ss_pred             ccCCcchheEEEcCCCCEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCC
Confidence            599999999999999999999999987553221111 111234567999999988888999999999999999998 688


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||.......                                       ...+...    ...         ...+.....
T Consensus       221 p~~~~~~~~---------------------------------------~~~~~~~----~~~---------~~~~~~~~~  248 (277)
T cd05062         221 PYQGMSNEQ---------------------------------------VLRFVME----GGL---------LDKPDNCPD  248 (277)
T ss_pred             CCCCCCHHH---------------------------------------HHHHHHc----CCc---------CCCCCCCCH
Confidence            886433221                                       1111000    000         001112234


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHh
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLN  191 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~  191 (231)
                      .+.+++.+||+.+|++|||+.+++++++
T Consensus       249 ~~~~li~~~l~~~p~~Rps~~e~l~~l~  276 (277)
T cd05062         249 MLFELMRMCWQYNPKMRPSFLEIISSIK  276 (277)
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence            5788999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.84  E-value=2.4e-21  Score=160.51  Aligned_cols=142  Identities=18%  Similarity=0.139  Sum_probs=100.9

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+|||++.++.+||+|||+++..... ........|+..|+|||++.+..++.++|+||+|+++++|++|..||
T Consensus       118 vHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf  196 (327)
T cd05617         118 IYRDLKLDNVLLDADGHIKLTDYGMCKEGLGP-GDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPF  196 (327)
T ss_pred             eccCCCHHHEEEeCCCCEEEeccccceeccCC-CCceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCC
Confidence            59999999999999999999999998753211 12234467899999999998888999999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      .....                                    ........+..+......      ..+    +......+
T Consensus       197 ~~~~~------------------------------------~~~~~~~~~~~~~~~~~~------~~~----p~~~~~~~  230 (327)
T cd05617         197 DIITD------------------------------------NPDMNTEDYLFQVILEKP------IRI----PRFLSVKA  230 (327)
T ss_pred             CccCC------------------------------------CcccccHHHHHHHHHhCC------CCC----CCCCCHHH
Confidence            64221                                    001111222222211110      011    11122345


Q ss_pred             HHHHHhhcCCCCCCCCC------HHHHHHHHhccc
Q 045790          166 LIVGLWCAHPDRCFRPS------IRQAIQVLNFET  194 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps------~~ell~~l~~~~  194 (231)
                      ..++.+||+.||++|++      +.++++|.++..
T Consensus       231 ~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~  265 (327)
T cd05617         231 SHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRS  265 (327)
T ss_pred             HHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCC
Confidence            78899999999999998      579999998754

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.84  E-value=3.3e-21  Score=156.76  Aligned_cols=138  Identities=19%  Similarity=0.161  Sum_probs=98.0

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCc-eeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CC
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPK-TIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GR   82 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~   82 (231)
                      -.||||||+||+++.++.++|+|||++.......... .....++..|+|||++.+..++.++|+||+|+++++|++ |.
T Consensus       141 i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~  220 (288)
T cd05093         141 FVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGK  220 (288)
T ss_pred             eeecccCcceEEEccCCcEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCC
Confidence            3699999999999999999999999987653221111 122234668999999988888999999999999999998 88


Q ss_pred             CccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           83 KVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        83 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      .||...........+.                                           ....     ...    +....
T Consensus       221 ~p~~~~~~~~~~~~i~-------------------------------------------~~~~-----~~~----~~~~~  248 (288)
T cd05093         221 QPWYQLSNNEVIECIT-------------------------------------------QGRV-----LQR----PRTCP  248 (288)
T ss_pred             CCCCCCCHHHHHHHHH-------------------------------------------cCCc-----CCC----CCCCC
Confidence            8886443221111110                                           0000     000    01112


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      ..+.+++.+||+.+|.+|||+.+++..|+...
T Consensus       249 ~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~  280 (288)
T cd05093         249 KEVYDLMLGCWQREPHMRLNIKEIHSLLQNLA  280 (288)
T ss_pred             HHHHHHHHHHccCChhhCCCHHHHHHHHHHHH
Confidence            35788999999999999999999998887643

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=99.84  E-value=2.3e-21  Score=148.40  Aligned_cols=138  Identities=17%  Similarity=0.098  Sum_probs=96.8

Q ss_pred             e-ecCCCCCCeeeCCCCcEEEeccccccccCCCCCCc--------eeEeeccccccchhhhhh---CCCCCCcccHhHHH
Q 045790            6 Y-SRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPK--------TIMLVGTLAYMASEYIST---GRVSKELDVFSFRV   73 (231)
Q Consensus         6 ~-~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~--------~~~~~g~~~y~aPE~~~~---~~~~~~~Dv~s~G~   73 (231)
                      | ||||||.|||+...+.+++.|||.+......-...        .....-|..|+|||.+..   ..++.++||||+||
T Consensus       150 yAH~DiKP~NILls~~~~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGC  229 (302)
T KOG2345|consen  150 YAHRDIKPANILLSDSGLPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGC  229 (302)
T ss_pred             ccccCCCcceeEecCCCceEEEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhH
Confidence            6 99999999999999999999999887643211100        111233668999999853   45789999999999


Q ss_pred             HHHHHHhCCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccc
Q 045790           74 VALEIATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERL  153 (231)
Q Consensus        74 vl~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  153 (231)
                      ++|+++.|..||......                                   ...              -...+....+
T Consensus       230 tLYa~mf~~sPfe~~~~~-----------------------------------GgS--------------laLAv~n~q~  260 (302)
T KOG2345|consen  230 TLYAMMFGESPFERIYQQ-----------------------------------GGS--------------LALAVQNAQI  260 (302)
T ss_pred             HHHHHHHcCCcchHHhhc-----------------------------------CCe--------------EEEeeecccc
Confidence            999999999999754321                                   000              0001111111


Q ss_pred             cCcccHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          154 DSRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       154 ~~~~~~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      .-.....-.+.+..++..|++.||.+||++.+|+.++..
T Consensus       261 s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~  299 (302)
T KOG2345|consen  261 SIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDD  299 (302)
T ss_pred             ccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHh
Confidence            111111235678899999999999999999999998865

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.84  E-value=1.2e-21  Score=162.06  Aligned_cols=134  Identities=17%  Similarity=0.111  Sum_probs=98.8

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+|||++.++.+||+|||++...... ........|+..|+|||++.+..++.++||||+||++++|++|..||
T Consensus       118 vH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf  196 (323)
T cd05575         118 IYRDLKPENILLDSQGHVVLTDFGLCKEGIEH-SKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPF  196 (323)
T ss_pred             EeCCCCHHHeEECCCCcEEEeccCCCcccccC-CCccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCC
Confidence            59999999999999999999999998653211 11223456899999999998888999999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      ........                                          ........       ..+...    ....+
T Consensus       197 ~~~~~~~~------------------------------------------~~~i~~~~-------~~~~~~----~~~~~  223 (323)
T cd05575         197 YSRDTAEM------------------------------------------YDNILNKP-------LRLKPN----ISVSA  223 (323)
T ss_pred             CCCCHHHH------------------------------------------HHHHHcCC-------CCCCCC----CCHHH
Confidence            75432211                                          11111000       011111    13456


Q ss_pred             HHHHHhhcCCCCCCCCCH----HHHHHHHhcc
Q 045790          166 LIVGLWCAHPDRCFRPSI----RQAIQVLNFE  193 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps~----~ell~~l~~~  193 (231)
                      .+++.+|++.||.+||++    .++++|+++.
T Consensus       224 ~~li~~~l~~~p~~R~~~~~~~~~il~~~~~~  255 (323)
T cd05575         224 RHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFS  255 (323)
T ss_pred             HHHHHHHhhcCHHhCCCCCCCHHHHHcCCCcC
Confidence            789999999999999987    5899888774

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.84  E-value=7.1e-21  Score=152.75  Aligned_cols=135  Identities=21%  Similarity=0.164  Sum_probs=97.7

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~p   84 (231)
                      .||||||+||+++.++.++|+|||.+...............++..|++||......++.++|+||+|++++++++ |..|
T Consensus       124 ~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p  203 (262)
T cd05071         124 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP  203 (262)
T ss_pred             cccccCcccEEEcCCCcEEeccCCceeeccccccccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCC
Confidence            599999999999999999999999987654322211122335567999999887888999999999999999999 7888


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |...........                                          ...          .............
T Consensus       204 ~~~~~~~~~~~~------------------------------------------~~~----------~~~~~~~~~~~~~  231 (262)
T cd05071         204 YPGMVNREVLDQ------------------------------------------VER----------GYRMPCPPECPES  231 (262)
T ss_pred             CCCCChHHHHHH------------------------------------------Hhc----------CCCCCCccccCHH
Confidence            864332111000                                          000          0000111223456


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      +.+++.+|++.+|++||++.++++.|+.
T Consensus       232 l~~li~~~l~~~p~~Rp~~~~~~~~l~~  259 (262)
T cd05071         232 LHDLMCQCWRKEPEERPTFEYLQAFLED  259 (262)
T ss_pred             HHHHHHHHccCCcccCCCHHHHHHHHHH
Confidence            7899999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.84  E-value=3e-21  Score=154.31  Aligned_cols=133  Identities=19%  Similarity=0.196  Sum_probs=94.7

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~p   84 (231)
                      .||||||+||+++.++.+|++|||+++..............++..|++||.+.+..++.++|+||+|+++|++++ |..|
T Consensus       122 ~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p  201 (256)
T cd05059         122 IHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMP  201 (256)
T ss_pred             ccccccHhhEEECCCCcEEECCcccceecccccccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCC
Confidence            499999999999999999999999987654322111111123347999999988888999999999999999998 7888


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |......+..                                       .   ...          .......+......
T Consensus       202 ~~~~~~~~~~---------------------------------------~---~~~----------~~~~~~~~~~~~~~  229 (256)
T cd05059         202 YERFSNSEVV---------------------------------------E---SVS----------AGYRLYRPKLAPTE  229 (256)
T ss_pred             CCCCCHHHHH---------------------------------------H---HHH----------cCCcCCCCCCCCHH
Confidence            8643321100                                       0   000          00000111112346


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHH
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVL  190 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l  190 (231)
                      +.+++.+||+.+|++|||+.++++.|
T Consensus       230 ~~~li~~cl~~~p~~Rpt~~~~l~~l  255 (256)
T cd05059         230 VYTIMYSCWHEKPEDRPAFKKLLSQL  255 (256)
T ss_pred             HHHHHHHHhcCChhhCcCHHHHHHHh
Confidence            78899999999999999999999876

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.84  E-value=4.3e-21  Score=155.28  Aligned_cols=138  Identities=21%  Similarity=0.178  Sum_probs=97.8

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCc-eeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPK-TIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~   83 (231)
                      .||||||+||+++.++.+||+|||+++......... .....++..|++||.+.+..++.++||||+||++||+++ |..
T Consensus       131 iH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~  210 (279)
T cd05109         131 VHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAK  210 (279)
T ss_pred             eccccccceEEEcCCCcEEECCCCceeecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCC
Confidence            599999999999999999999999998764321111 111223567999999988889999999999999999998 888


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||......                                       .+..++..    .         .....+.....
T Consensus       211 p~~~~~~~---------------------------------------~~~~~~~~----~---------~~~~~~~~~~~  238 (279)
T cd05109         211 PYDGIPAR---------------------------------------EIPDLLEK----G---------ERLPQPPICTI  238 (279)
T ss_pred             CCCCCCHH---------------------------------------HHHHHHHC----C---------CcCCCCccCCH
Confidence            88643321                                       11111110    0         00001112234


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhcccC
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNFETT  195 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~  195 (231)
                      .+..++..||+.||++||++.+++..+.....
T Consensus       239 ~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~  270 (279)
T cd05109         239 DVYMIMVKCWMIDSECRPRFRELVDEFSRMAR  270 (279)
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence            56789999999999999999999998876543

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.84  E-value=3.8e-21  Score=153.81  Aligned_cols=134  Identities=19%  Similarity=0.196  Sum_probs=95.1

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~p   84 (231)
                      .||||||.||+++.++.+||+|||.++..............++..|++||.+.+..++.++|+||+|+++|++++ |..|
T Consensus       122 ~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p  201 (256)
T cd05113         122 IHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMP  201 (256)
T ss_pred             eccccCcceEEEcCCCCEEECCCccceecCCCceeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCC
Confidence            599999999999999999999999987654322111111234567999999987788999999999999999998 8988


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |.......                                       +....   .. .         .....+......
T Consensus       202 ~~~~~~~~---------------------------------------~~~~~---~~-~---------~~~~~~~~~~~~  229 (256)
T cd05113         202 YERFNNSE---------------------------------------TVEKV---SQ-G---------LRLYRPHLASEK  229 (256)
T ss_pred             cCcCCHHH---------------------------------------HHHHH---hc-C---------CCCCCCCCCCHH
Confidence            86433211                                       11110   00 0         000001112356


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHh
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLN  191 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~  191 (231)
                      +.+++.+||+.+|++||++.+|+..++
T Consensus       230 ~~~li~~cl~~~p~~Rp~~~~ll~~~~  256 (256)
T cd05113         230 VYAIMYSCWHEKAEERPTFQQLLSSIE  256 (256)
T ss_pred             HHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence            788999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.84  E-value=4.2e-21  Score=155.65  Aligned_cols=136  Identities=21%  Similarity=0.200  Sum_probs=96.7

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCC-CceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CC
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELG-PKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GR   82 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~   82 (231)
                      -.||||||+||+++.++.+||+|||+++....... .......++..|++||++.+..++.++|+||+|++++++++ |.
T Consensus       145 i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~  224 (283)
T cd05090         145 FVHKDLAARNILIGEQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGL  224 (283)
T ss_pred             eehhccccceEEEcCCCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCC
Confidence            35999999999999999999999999876543211 11122344567999999987788999999999999999998 88


Q ss_pred             CccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           83 KVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        83 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      .||.......+.                                       ..+.    .....         ..+....
T Consensus       225 ~p~~~~~~~~~~---------------------------------------~~~~----~~~~~---------~~~~~~~  252 (283)
T cd05090         225 QPYYGFSNQEVI---------------------------------------EMVR----KRQLL---------PCSEDCP  252 (283)
T ss_pred             CCCCCCCHHHHH---------------------------------------HHHH----cCCcC---------CCCCCCC
Confidence            888643321111                                       1000    00000         0111122


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      ..+..++.+||+.+|++||++.+|+++|..
T Consensus       253 ~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05090         253 PRMYSLMTECWQEGPSRRPRFKDIHTRLRS  282 (283)
T ss_pred             HHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence            456778999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.84  E-value=4e-21  Score=153.52  Aligned_cols=133  Identities=17%  Similarity=0.161  Sum_probs=94.8

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~p   84 (231)
                      .||||||+||+++.++.+|++|||.+...............++..|+|||.+.+..++.++|+||+|++++++++ |+.|
T Consensus       122 ~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p  201 (256)
T cd05114         122 IHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMP  201 (256)
T ss_pred             cccccCcceEEEcCCCeEEECCCCCccccCCCceeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCC
Confidence            499999999999999999999999887653221111112234457999999987788999999999999999999 8999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |......+.                                       ...+.+   ...   ...+       ......
T Consensus       202 ~~~~~~~~~---------------------------------------~~~i~~---~~~---~~~~-------~~~~~~  229 (256)
T cd05114         202 FEKKSNYEV---------------------------------------VEMISR---GFR---LYRP-------KLASMT  229 (256)
T ss_pred             CCCCCHHHH---------------------------------------HHHHHC---CCC---CCCC-------CCCCHH
Confidence            865432211                                       111100   000   0001       111245


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHH
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVL  190 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l  190 (231)
                      +.+++.+||+.+|++||++.++++.|
T Consensus       230 ~~~li~~c~~~~p~~Rps~~~l~~~l  255 (256)
T cd05114         230 VYEVMYSCWHEKPEGRPTFAELLRAI  255 (256)
T ss_pred             HHHHHHHHccCCcccCcCHHHHHHhh
Confidence            78899999999999999999999876

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.84  E-value=3.7e-21  Score=154.61  Aligned_cols=83  Identities=25%  Similarity=0.270  Sum_probs=68.1

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCC--CceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELG--PKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~   83 (231)
                      +||||||+||+++.++.++|+|||++..+.....  .......++..|+|||.+.+..++.++|+||+|++++++++|+.
T Consensus       128 ~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~  207 (266)
T cd06651         128 VHRDIKGANILRDSAGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKP  207 (266)
T ss_pred             eeCCCCHHHEEECCCCCEEEccCCCccccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCC
Confidence            5999999999999999999999999876532111  11123457788999999988788999999999999999999999


Q ss_pred             ccccc
Q 045790           84 VINRY   88 (231)
Q Consensus        84 p~~~~   88 (231)
                      ||...
T Consensus       208 pf~~~  212 (266)
T cd06651         208 PWAEY  212 (266)
T ss_pred             Ccccc
Confidence            99643

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.84  E-value=6.1e-21  Score=152.78  Aligned_cols=135  Identities=16%  Similarity=0.130  Sum_probs=96.6

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCce--eEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKT--IMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GR   82 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~--~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~   82 (231)
                      .||||||+||+++.++.+||+|||++...........  ....++..|++||.+....++.++|+||+|+++|++++ |.
T Consensus       117 ~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~  196 (257)
T cd05115         117 VHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQ  196 (257)
T ss_pred             eecccchheEEEcCCCcEEeccCCccccccCCccceeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCC
Confidence            5999999999999999999999999876543221111  11122457999999887778999999999999999996 99


Q ss_pred             CccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           83 KVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        83 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      .||......                                       .+...+.             .......+....
T Consensus       197 ~p~~~~~~~---------------------------------------~~~~~~~-------------~~~~~~~~~~~~  224 (257)
T cd05115         197 KPYKKMKGP---------------------------------------EVMSFIE-------------QGKRLDCPAECP  224 (257)
T ss_pred             CCcCcCCHH---------------------------------------HHHHHHH-------------CCCCCCCCCCCC
Confidence            998654321                                       1111110             011111222234


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      ..+.+++.+||..+|++||++.+|.+.|..
T Consensus       225 ~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~  254 (257)
T cd05115         225 PEMYALMKDCWIYKWEDRPNFAKVEERMRT  254 (257)
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHHHHhh
Confidence            566789999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.84  E-value=5.9e-21  Score=152.35  Aligned_cols=134  Identities=20%  Similarity=0.212  Sum_probs=98.8

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+||+++.++.++|+|||++....... .......++..|+|||++.+..++.++|+||+|++++++++|+.||
T Consensus       124 ~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~  202 (257)
T cd08223         124 LHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC-DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAF  202 (257)
T ss_pred             eccCCCchhEEEecCCcEEEecccceEEecccC-CccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCC
Confidence            599999999999999999999999987664321 1223346788999999998888889999999999999999999998


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      ......                                          ........ ...     +    ..+......+
T Consensus       203 ~~~~~~------------------------------------------~~~~~~~~-~~~-----~----~~~~~~~~~~  230 (257)
T cd08223         203 NAKDMN------------------------------------------SLVYRIIE-GKL-----P----PMPKDYSPEL  230 (257)
T ss_pred             CCCCHH------------------------------------------HHHHHHHh-cCC-----C----CCccccCHHH
Confidence            643211                                          11111110 000     0    1111223457


Q ss_pred             HHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          166 LIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      .+++.+|++.+|++|||+.++++|+++
T Consensus       231 ~~li~~~l~~~p~~Rp~~~~~l~~~~~  257 (257)
T cd08223         231 GELIATMLSKRPEKRPSVKSILRQPYI  257 (257)
T ss_pred             HHHHHHHhccCcccCCCHHHHhcCCCC
Confidence            789999999999999999999998763

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.84  E-value=6.3e-21  Score=153.21  Aligned_cols=135  Identities=23%  Similarity=0.231  Sum_probs=96.8

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCC-ceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGP-KTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~   83 (231)
                      +||||||+||+++.++.++|+|||+++........ ......++..|++||.+.+..++.++|+||+|++++++++ |..
T Consensus       128 ~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~  207 (266)
T cd05033         128 VHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGER  207 (266)
T ss_pred             ccCCCCcceEEEcCCCCEEECccchhhcccccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCC
Confidence            59999999999999999999999999876421111 1112233567999999988888999999999999999987 988


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||.......                                       +......    .         .....+.....
T Consensus       208 p~~~~~~~~---------------------------------------~~~~~~~----~---------~~~~~~~~~~~  235 (266)
T cd05033         208 PYWDMSNQD---------------------------------------VIKAVED----G---------YRLPPPMDCPS  235 (266)
T ss_pred             CCCCCCHHH---------------------------------------HHHHHHc----C---------CCCCCCCCCCH
Confidence            885433211                                       1111100    0         00001112234


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      .+.+++.+||+.+|++||++.+|+++|..
T Consensus       236 ~l~~li~~cl~~~p~~Rp~~~ei~~~l~~  264 (266)
T cd05033         236 ALYQLMLDCWQKDRNERPTFSQIVSTLDK  264 (266)
T ss_pred             HHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence            57899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.84  E-value=7.4e-21  Score=152.03  Aligned_cols=137  Identities=20%  Similarity=0.154  Sum_probs=98.4

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCce--eEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-C
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKT--IMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-G   81 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~--~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g   81 (231)
                      ..||||||+||+++.++.+||+|||+++..........  ....++..|++||.+.+..++.++|+||+|++++++++ |
T Consensus       116 i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g  195 (257)
T cd05060         116 FVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYG  195 (257)
T ss_pred             eeccCcccceEEEcCCCcEEeccccccceeecCCcccccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCC
Confidence            36999999999999999999999999876643322111  11123457999999988889999999999999999997 9


Q ss_pred             CCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHH
Q 045790           82 RKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQ  161 (231)
Q Consensus        82 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  161 (231)
                      ..||......                                       .+..++.+.    .         ....+...
T Consensus       196 ~~p~~~~~~~---------------------------------------~~~~~~~~~----~---------~~~~~~~~  223 (257)
T cd05060         196 AKPYGEMKGA---------------------------------------EVIAMLESG----E---------RLPRPEEC  223 (257)
T ss_pred             CCCcccCCHH---------------------------------------HHHHHHHcC----C---------cCCCCCCC
Confidence            9998653321                                       111111110    0         00011122


Q ss_pred             HHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcc
Q 045790          162 MTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFE  193 (231)
Q Consensus       162 ~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~  193 (231)
                      ...+.+++.+||+.+|++||++.+|++.|...
T Consensus       224 ~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~  255 (257)
T cd05060         224 PQEIYSIMLSCWKYRPEDRPTFSELESTFRRD  255 (257)
T ss_pred             CHHHHHHHHHHhcCChhhCcCHHHHHHHHHhc
Confidence            34577899999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.84  E-value=9.2e-21  Score=151.83  Aligned_cols=135  Identities=21%  Similarity=0.175  Sum_probs=97.4

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~p   84 (231)
                      .|||||++||+++.++.++|+|||++...............++..|++||...+..++.++|+||+|++++++++ |..|
T Consensus       124 ~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p  203 (260)
T cd05069         124 IHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVP  203 (260)
T ss_pred             eecccCcceEEEcCCCeEEECCCccceEccCCcccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCC
Confidence            599999999999999999999999997654322211122234567999999887788999999999999999998 8889


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |.......                                       ...+...   .          ............
T Consensus       204 ~~~~~~~~---------------------------------------~~~~~~~---~----------~~~~~~~~~~~~  231 (260)
T cd05069         204 YPGMVNRE---------------------------------------VLEQVER---G----------YRMPCPQGCPES  231 (260)
T ss_pred             CCCCCHHH---------------------------------------HHHHHHc---C----------CCCCCCcccCHH
Confidence            86533211                                       1111100   0          000111122355


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      +.+++.+||+.+|++||++.+|++.|+.
T Consensus       232 ~~~li~~~l~~~p~~Rp~~~~i~~~l~~  259 (260)
T cd05069         232 LHELMKLCWKKDPDERPTFEYIQSFLED  259 (260)
T ss_pred             HHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence            7889999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.84  E-value=6.6e-21  Score=151.59  Aligned_cols=135  Identities=19%  Similarity=0.145  Sum_probs=96.4

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCC
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRK   83 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~   83 (231)
                      ..||||||+||+++.++.+||+|||++...............++..|++||++....++.++|+||+|++++++++ |..
T Consensus       114 ~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~  193 (250)
T cd05085         114 CIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVC  193 (250)
T ss_pred             eeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCC
Confidence            3599999999999999999999999987654322211122233567999999987888999999999999999998 898


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||........                                       ...+   .          .............
T Consensus       194 p~~~~~~~~~---------------------------------------~~~~---~----------~~~~~~~~~~~~~  221 (250)
T cd05085         194 PYPGMTNQQA---------------------------------------REQV---E----------KGYRMSCPQKCPD  221 (250)
T ss_pred             CCCCCCHHHH---------------------------------------HHHH---H----------cCCCCCCCCCCCH
Confidence            9865432110                                       0000   0          0000011112235


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHh
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLN  191 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~  191 (231)
                      .+.+++.+|++.+|++||++.++++.|.
T Consensus       222 ~~~~li~~~l~~~p~~Rp~~~~l~~~l~  249 (250)
T cd05085         222 DVYKVMQRCWDYKPENRPKFSELQKELA  249 (250)
T ss_pred             HHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence            6788999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.84  E-value=5.6e-21  Score=154.52  Aligned_cols=134  Identities=18%  Similarity=0.112  Sum_probs=94.0

Q ss_pred             eecCCCCCCeeeCCCC---cEEEeccccccccCCCCCCc-eeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-
Q 045790            6 YSRSPELPPGRGDFNF---NAKLGDFGLARLMDHELGPK-TIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-   80 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~---~~kl~Dfg~~~~~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-   80 (231)
                      .||||||+||+++.++   .+||+|||+++......... ......+..|++||++.+..++.++||||+||+++++++ 
T Consensus       138 vH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~  217 (277)
T cd05036         138 IHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSL  217 (277)
T ss_pred             eecccchheEEEeccCCCcceEeccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcC
Confidence            5999999999998654   58999999987653221111 111223457999999988889999999999999999996 


Q ss_pred             CCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHH
Q 045790           81 GRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQ  160 (231)
Q Consensus        81 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  160 (231)
                      |..||........                                       ...+   .          .......+..
T Consensus       218 g~~pf~~~~~~~~---------------------------------------~~~~---~----------~~~~~~~~~~  245 (277)
T cd05036         218 GYMPYPGRTNQEV---------------------------------------MEFV---T----------GGGRLDPPKG  245 (277)
T ss_pred             CCCCCCCCCHHHH---------------------------------------HHHH---H----------cCCcCCCCCC
Confidence            9999875432211                                       1100   0          0000011112


Q ss_pred             HHHHHHHHHHhhcCCCCCCCCCHHHHHHHHh
Q 045790          161 QMTCLLIVGLWCAHPDRCFRPSIRQAIQVLN  191 (231)
Q Consensus       161 ~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~  191 (231)
                      ....+.+++.+||+.+|++||++.+|+++|.
T Consensus       246 ~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~  276 (277)
T cd05036         246 CPGPVYRIMTDCWQHTPEDRPNFATILERIQ  276 (277)
T ss_pred             CCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence            2346788999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.84  E-value=8.4e-21  Score=151.31  Aligned_cols=133  Identities=21%  Similarity=0.211  Sum_probs=98.5

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .|||||++||+++.++.++|+|||+++....... ......++..|++||+.....++.++|+||+|++++++++|+.||
T Consensus       123 ~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~  201 (256)
T cd08529         123 LHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTN-FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPF  201 (256)
T ss_pred             ccCCCCcceEEEeCCCCEEEcccccceeccCccc-hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCC
Confidence            4999999999999999999999999876643221 123346788999999998888899999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      .........                                       .   ...          ..............+
T Consensus       202 ~~~~~~~~~---------------------------------------~---~~~----------~~~~~~~~~~~~~~~  229 (256)
T cd08529         202 DANNQGALI---------------------------------------L---KII----------RGVFPPVSQMYSQQL  229 (256)
T ss_pred             CCCCHHHHH---------------------------------------H---HHH----------cCCCCCCccccCHHH
Confidence            654321100                                       0   000          000011111223457


Q ss_pred             HHHHHhhcCCCCCCCCCHHHHHHHHh
Q 045790          166 LIVGLWCAHPDRCFRPSIRQAIQVLN  191 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps~~ell~~l~  191 (231)
                      .+++.+||+.+|++||++.+++++.+
T Consensus       230 ~~~i~~~l~~~p~~Rp~~~~ll~~~~  255 (256)
T cd08529         230 AQLIDQCLTKDYRQRPDTFQLLRNPS  255 (256)
T ss_pred             HHHHHHHccCCcccCcCHHHHhhCCC
Confidence            88999999999999999999998853

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.84  E-value=4.3e-21  Score=162.47  Aligned_cols=132  Identities=20%  Similarity=0.156  Sum_probs=105.5

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhh---hCCCCCCcccHhHHHHHHHHHhCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIS---TGRVSKELDVFSFRVVALEIATGR   82 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~s~G~vl~el~~g~   82 (231)
                      .|||||.-|||++.+|.+||+|||.+....+     ..+++||++|||||++.   .++|+.++||||+||++.|+...+
T Consensus       148 IHRDiKAGNILLse~g~VKLaDFGSAsi~~P-----AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERk  222 (948)
T KOG0577|consen  148 IHRDIKAGNILLSEPGLVKLADFGSASIMAP-----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERK  222 (948)
T ss_pred             HhhhccccceEecCCCeeeeccccchhhcCc-----hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcC
Confidence            5999999999999999999999999876532     35689999999999985   478999999999999999999999


Q ss_pred             CccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           83 KVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        83 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      +|+..+++...+-.|..+.+..                                                |.   ..+=.
T Consensus       223 PPlFnMNAMSALYHIAQNesPt------------------------------------------------Lq---s~eWS  251 (948)
T KOG0577|consen  223 PPLFNMNAMSALYHIAQNESPT------------------------------------------------LQ---SNEWS  251 (948)
T ss_pred             CCccCchHHHHHHHHHhcCCCC------------------------------------------------CC---CchhH
Confidence            9999887654444443332211                                                11   11224


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHhcc
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLNFE  193 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~  193 (231)
                      ..|..|+..|++.-|.+|||..+++.|..-.
T Consensus       252 ~~F~~Fvd~CLqKipqeRptse~ll~H~fv~  282 (948)
T KOG0577|consen  252 DYFRNFVDSCLQKIPQERPTSEELLKHRFVL  282 (948)
T ss_pred             HHHHHHHHHHHhhCcccCCcHHHHhhcchhc
Confidence            4578899999999999999999999887643

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.84  E-value=7.4e-21  Score=152.22  Aligned_cols=134  Identities=20%  Similarity=0.182  Sum_probs=97.7

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~p   84 (231)
                      .|||||++||+++.++.+||+|||.+......... .....++..|++||.+....++.++|+||+|++++++++ |..|
T Consensus       126 ~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~-~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p  204 (261)
T cd05148         126 IHRDLAARNILVGEDLVCKVADFGLARLIKEDVYL-SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVP  204 (261)
T ss_pred             eccccCcceEEEcCCceEEEccccchhhcCCcccc-ccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCC
Confidence            59999999999999999999999998766432211 122334567999999987788999999999999999998 8899


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |......                                       .......             .......+......
T Consensus       205 ~~~~~~~---------------------------------------~~~~~~~-------------~~~~~~~~~~~~~~  232 (261)
T cd05148         205 YPGMNNH---------------------------------------EVYDQIT-------------AGYRMPCPAKCPQE  232 (261)
T ss_pred             CCcCCHH---------------------------------------HHHHHHH-------------hCCcCCCCCCCCHH
Confidence            8643311                                       1111110             01111111223356


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      +.+++.+||+.||++|||+.++++.|+.
T Consensus       233 ~~~~i~~~l~~~p~~Rpt~~~l~~~L~~  260 (261)
T cd05148         233 IYKIMLECWAAEPEDRPSFKALREELDN  260 (261)
T ss_pred             HHHHHHHHcCCCchhCcCHHHHHHHHhc
Confidence            7889999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.83  E-value=7.1e-21  Score=153.62  Aligned_cols=134  Identities=22%  Similarity=0.240  Sum_probs=97.3

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCC-ceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGP-KTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~   83 (231)
                      .||||||+||+++.++.+||+|||+++........ ......++..|+|||.+....++.++|+||+|++++++++ |..
T Consensus       141 ~H~di~p~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~  220 (277)
T cd05032         141 VHRDLAARNCMVAEDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQ  220 (277)
T ss_pred             cccccChheEEEcCCCCEEECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCC
Confidence            59999999999999999999999998765432211 1122345678999999987888999999999999999998 888


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||.......                                       +..+..    ....         ...+.....
T Consensus       221 p~~~~~~~~---------------------------------------~~~~~~----~~~~---------~~~~~~~~~  248 (277)
T cd05032         221 PYQGLSNEE---------------------------------------VLKFVI----DGGH---------LDLPENCPD  248 (277)
T ss_pred             CCccCCHHH---------------------------------------HHHHHh----cCCC---------CCCCCCCCH
Confidence            886433221                                       111110    0000         001111245


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHh
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLN  191 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~  191 (231)
                      .+.+++.+||+.+|++|||+.+|++.|+
T Consensus       249 ~~~~li~~~l~~~p~~Rpt~~~l~~~l~  276 (277)
T cd05032         249 KLLELMRMCWQYNPKMRPTFLEIVSSLK  276 (277)
T ss_pred             HHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence            6788999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.83  E-value=7.5e-21  Score=155.82  Aligned_cols=137  Identities=23%  Similarity=0.124  Sum_probs=98.2

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCC-ceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGP-KTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~   83 (231)
                      .||||||+||+++.++.+||+|||+++........ ......++..|+|||++.+..++.++||||+|++++++++ |..
T Consensus       159 vH~dlkp~Nili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~  238 (304)
T cd05101         159 IHRDLAARNVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS  238 (304)
T ss_pred             eecccccceEEEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCC
Confidence            59999999999999999999999999766432111 1122334567999999988788999999999999999998 777


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||......                                          .+...... .         .....+.....
T Consensus       239 p~~~~~~~------------------------------------------~~~~~~~~-~---------~~~~~~~~~~~  266 (304)
T cd05101         239 PYPGIPVE------------------------------------------ELFKLLKE-G---------HRMDKPANCTN  266 (304)
T ss_pred             CcccCCHH------------------------------------------HHHHHHHc-C---------CcCCCCCCCCH
Confidence            77543221                                          11111110 0         00011112335


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      .+..++.+||+.+|++|||+.+|++.|....
T Consensus       267 ~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~  297 (304)
T cd05101         267 ELYMMMRDCWHAIPSHRPTFKQLVEDLDRIL  297 (304)
T ss_pred             HHHHHHHHHcccChhhCCCHHHHHHHHHHHH
Confidence            6778999999999999999999999997644

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.83  E-value=1.7e-21  Score=161.23  Aligned_cols=83  Identities=20%  Similarity=0.177  Sum_probs=70.1

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+|||++.++.+||+|||+++..... ........|+..|+|||++.+..++.++||||+||++++|++|..||
T Consensus       118 iHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf  196 (325)
T cd05602         118 VYRDLKPENILLDSQGHIVLTDFGLCKENIEH-NGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPF  196 (325)
T ss_pred             EecCCCHHHeEECCCCCEEEccCCCCcccccC-CCCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCC
Confidence            59999999999999999999999998754221 12233457899999999998888999999999999999999999999


Q ss_pred             ccch
Q 045790           86 NRYK   89 (231)
Q Consensus        86 ~~~~   89 (231)
                      ....
T Consensus       197 ~~~~  200 (325)
T cd05602         197 YSRN  200 (325)
T ss_pred             CCCC
Confidence            7543

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.83  E-value=5.8e-21  Score=152.41  Aligned_cols=133  Identities=19%  Similarity=0.168  Sum_probs=95.3

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~p   84 (231)
                      .||||||+||+++.++.++|+|||++...............++..|++||.+.+..++.++|+||+|+++|++++ |..|
T Consensus       122 ~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p  201 (256)
T cd05112         122 IHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTP  201 (256)
T ss_pred             cccccccceEEEcCCCeEEECCCcceeecccCcccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCC
Confidence            599999999999999999999999987654322111112234568999999988888999999999999999998 8999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |.......                                          .........   ....+..       ....
T Consensus       202 ~~~~~~~~------------------------------------------~~~~~~~~~---~~~~~~~-------~~~~  229 (256)
T cd05112         202 YENRSNSE------------------------------------------VVETINAGF---RLYKPRL-------ASQS  229 (256)
T ss_pred             CCcCCHHH------------------------------------------HHHHHhCCC---CCCCCCC-------CCHH
Confidence            86443211                                          111110000   0001111       1356


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHH
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVL  190 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l  190 (231)
                      +.+++.+||+.+|++|||+.+++++|
T Consensus       230 ~~~l~~~~l~~~p~~Rp~~~~~l~~l  255 (256)
T cd05112         230 VYELMQHCWKERPEDRPSFSLLLHQL  255 (256)
T ss_pred             HHHHHHHHcccChhhCCCHHHHHHhh
Confidence            78899999999999999999999987

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.83  E-value=7.1e-21  Score=154.89  Aligned_cols=136  Identities=21%  Similarity=0.131  Sum_probs=97.7

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCC-ceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGP-KTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~   83 (231)
                      .||||||+||+++.++.+||+|||+++........ ......++..|++||.+.+..++.++||||+|++++++++ |..
T Consensus       149 vH~dikp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~  228 (290)
T cd05045         149 VHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGN  228 (290)
T ss_pred             ehhhhhhheEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCC
Confidence            59999999999999999999999998764322111 1122234567999999877778999999999999999998 999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||......                                       .+..++.             .......+.....
T Consensus       229 p~~~~~~~---------------------------------------~~~~~~~-------------~~~~~~~~~~~~~  256 (290)
T cd05045         229 PYPGIAPE---------------------------------------RLFNLLK-------------TGYRMERPENCSE  256 (290)
T ss_pred             CCCCCCHH---------------------------------------HHHHHHh-------------CCCCCCCCCCCCH
Confidence            98643322                                       1111110             0001111112234


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhcc
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNFE  193 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~~  193 (231)
                      .+.+++..||+.+|++||++.+++..|...
T Consensus       257 ~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~  286 (290)
T cd05045         257 EMYNLMLTCWKQEPDKRPTFADISKELEKM  286 (290)
T ss_pred             HHHHHHHHHccCCcccCCCHHHHHHHHHHH
Confidence            678899999999999999999999998753

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.83  E-value=5.3e-21  Score=162.97  Aligned_cols=131  Identities=17%  Similarity=0.063  Sum_probs=100.7

Q ss_pred             eeeecCCCCCCeee-CCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCC
Q 045790            4 VAYSRSPELPPGRG-DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGR   82 (231)
Q Consensus         4 ~~~~rdlk~~nil~-~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~   82 (231)
                      ..+|||+||.|||+ +..+.++|+|||.++.....    +.+.+-|..|.|||++....++.++|+||+|+++|+|++|+
T Consensus       435 gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~----~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~  510 (612)
T KOG0603|consen  435 GVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS----CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGR  510 (612)
T ss_pred             CeeecCCChhheeecCCCCcEEEEEechhhhCchh----hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCC
Confidence            45799999999999 58889999999999876543    34445677899999998888999999999999999999999


Q ss_pred             CccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           83 KVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        83 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      .||.....+                                      ..+..             .+   ..+.+.....
T Consensus       511 tp~~~~P~~--------------------------------------~ei~~-------------~i---~~~~~s~~vS  536 (612)
T KOG0603|consen  511 TLFAAHPAG--------------------------------------IEIHT-------------RI---QMPKFSECVS  536 (612)
T ss_pred             CccccCCch--------------------------------------HHHHH-------------hh---cCCccccccC
Confidence            999754321                                      00000             00   0011112233


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      ....+|+..||+.||.+|++|.++..|.++
T Consensus       537 ~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~  566 (612)
T KOG0603|consen  537 DEAKDLLQQLLQVDPALRLGADEIGAHPWF  566 (612)
T ss_pred             HHHHHHHHHhccCChhhCcChhhhccCcch
Confidence            445678889999999999999999999999

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.83  E-value=1.9e-21  Score=160.62  Aligned_cols=135  Identities=16%  Similarity=0.104  Sum_probs=98.0

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCc
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      -.||||||+||+++.++.+||+|||+++..... ........|+..|+|||.+.+..++.++||||+||++++|++|..|
T Consensus       117 ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~p  195 (321)
T cd05603         117 IIYRDLKPENILLDSQGHVVLTDFGLCKEGVEP-EETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPP  195 (321)
T ss_pred             eEeccCCHHHeEECCCCCEEEccCCCCccCCCC-CCccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCC
Confidence            359999999999999999999999998753221 1122345688999999999888899999999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |......                                          ..........         +  ..+......
T Consensus       196 f~~~~~~------------------------------------------~~~~~i~~~~---------~--~~~~~~~~~  222 (321)
T cd05603         196 FYSRDVS------------------------------------------QMYDNILHKP---------L--QLPGGKTVA  222 (321)
T ss_pred             CCCCCHH------------------------------------------HHHHHHhcCC---------C--CCCCCCCHH
Confidence            9654321                                          1111111000         0  011112345


Q ss_pred             HHHHHHhhcCCCCCCCCCH----HHHHHHHhcc
Q 045790          165 LLIVGLWCAHPDRCFRPSI----RQAIQVLNFE  193 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~----~ell~~l~~~  193 (231)
                      +.+++.+|++.||.+|+++    .++++|+++.
T Consensus       223 ~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~~  255 (321)
T cd05603         223 ACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFS  255 (321)
T ss_pred             HHHHHHHHccCCHhhcCCCCCCHHHHhCCCCcC
Confidence            6789999999999999875    5888877763

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.83  E-value=4.3e-21  Score=153.21  Aligned_cols=141  Identities=19%  Similarity=0.162  Sum_probs=99.8

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhh-hCCCCCCcccHhHHHHHHHHHhCCC
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIS-TGRVSKELDVFSFRVVALEIATGRK   83 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~-~~~~~~~~Dv~s~G~vl~el~~g~~   83 (231)
                      -+||||||.||+++.++.++|+|||.+.... ..........++..|+|||.+. +..++.++|+||+|+++++|++|..
T Consensus       119 i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~-~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~  197 (260)
T PF00069_consen  119 IVHRDIKPENILLDENGEVKLIDFGSSVKLS-ENNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKL  197 (260)
T ss_dssp             EEESSBSGGGEEESTTSEEEESSGTTTEEST-STTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSS
T ss_pred             ccccccccccccccccccccccccccccccc-cccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            3699999999999999999999999987542 1122234456788999999997 6678999999999999999999999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||......                                       +............     ......  .......
T Consensus       198 p~~~~~~~---------------------------------------~~~~~~~~~~~~~-----~~~~~~--~~~~~~~  231 (260)
T PF00069_consen  198 PFEESNSD---------------------------------------DQLEIIEKILKRP-----LPSSSQ--QSREKSE  231 (260)
T ss_dssp             SSTTSSHH---------------------------------------HHHHHHHHHHHTH-----HHHHTT--SHTTSHH
T ss_pred             ccccccch---------------------------------------hhhhhhhhccccc-----cccccc--ccchhHH
Confidence            99754110                                       0011111110000     000000  0001126


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      .+.+++..||+.||++|||+.++++|+++
T Consensus       232 ~l~~li~~~l~~~p~~R~~~~~l~~~~~~  260 (260)
T PF00069_consen  232 ELRDLIKKMLSKDPEQRPSAEELLKHPWF  260 (260)
T ss_dssp             HHHHHHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred             HHHHHHHHHccCChhHCcCHHHHhcCCCC
Confidence            78899999999999999999999999875

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.83  E-value=8.6e-21  Score=151.58  Aligned_cols=131  Identities=23%  Similarity=0.184  Sum_probs=95.1

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~p   84 (231)
                      .||||||+||+++.++.+||+|||++.......    ....++..|++||++....++.++||||+|++++++++ |+.|
T Consensus       124 ~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p  199 (256)
T cd05082         124 VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP  199 (256)
T ss_pred             eccccchheEEEcCCCcEEecCCccceeccccC----CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCC
Confidence            599999999999999999999999987543221    11233457999999987788999999999999999997 8888


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |.......                                       +...+..             .............
T Consensus       200 ~~~~~~~~---------------------------------------~~~~~~~-------------~~~~~~~~~~~~~  227 (256)
T cd05082         200 YPRIPLKD---------------------------------------VVPRVEK-------------GYKMDAPDGCPPV  227 (256)
T ss_pred             CCCCCHHH---------------------------------------HHHHHhc-------------CCCCCCCCCCCHH
Confidence            86433211                                       1111100             0000111122345


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      +.+++.+||+.+|++|||+.++++.|..
T Consensus       228 ~~~li~~~l~~~p~~Rpt~~~l~~~l~~  255 (256)
T cd05082         228 VYDVMKQCWHLDAATRPSFLQLREQLEH  255 (256)
T ss_pred             HHHHHHHHhcCChhhCcCHHHHHHHHhc
Confidence            6788999999999999999999998864

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.83  E-value=8.6e-21  Score=155.01  Aligned_cols=135  Identities=20%  Similarity=0.116  Sum_probs=95.3

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~p   84 (231)
                      .||||||+||+++.++.+||+|||++......  ........+..|++||+.....++.++||||+|+++++|++ |..|
T Consensus       141 vH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~p  218 (297)
T cd05089         141 IHRDLAARNVLVGENLASKIADFGLSRGEEVY--VKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTP  218 (297)
T ss_pred             ccCcCCcceEEECCCCeEEECCcCCCccccce--eccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCC
Confidence            49999999999999999999999998543211  01111122457999999877788999999999999999997 9999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |.......                                          ......          .......+......
T Consensus       219 f~~~~~~~------------------------------------------~~~~~~----------~~~~~~~~~~~~~~  246 (297)
T cd05089         219 YCGMTCAE------------------------------------------LYEKLP----------QGYRMEKPRNCDDE  246 (297)
T ss_pred             CCCCCHHH------------------------------------------HHHHHh----------cCCCCCCCCCCCHH
Confidence            86543211                                          111110          00111111122345


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      +.+++.+||+.+|.+||++.++++.|....
T Consensus       247 ~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~  276 (297)
T cd05089         247 VYELMRQCWRDRPYERPPFAQISVQLSRML  276 (297)
T ss_pred             HHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            678999999999999999999999887644

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.83  E-value=1.4e-21  Score=161.82  Aligned_cols=135  Identities=18%  Similarity=0.083  Sum_probs=98.6

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+|||++.++.+||+|||+++..... ........|+..|+|||.+.+..++.++||||+||++++|++|..||
T Consensus       118 vH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf  196 (325)
T cd05604         118 VYRDLKPENILLDSQGHVVLTDFGLCKEGIAQ-SDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPF  196 (325)
T ss_pred             eecCCCHHHeEECCCCCEEEeecCCcccCCCC-CCCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCC
Confidence            59999999999999999999999998653221 11223457899999999998888999999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      ........                                          ........       ..+..    .....+
T Consensus       197 ~~~~~~~~------------------------------------------~~~~~~~~-------~~~~~----~~~~~~  223 (325)
T cd05604         197 YCRDVAEM------------------------------------------YDNILHKP-------LVLRP----GASLTA  223 (325)
T ss_pred             CCCCHHHH------------------------------------------HHHHHcCC-------ccCCC----CCCHHH
Confidence            75432211                                          11111000       00111    112346


Q ss_pred             HHHHHhhcCCCCCCCCCH----HHHHHHHhccc
Q 045790          166 LIVGLWCAHPDRCFRPSI----RQAIQVLNFET  194 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps~----~ell~~l~~~~  194 (231)
                      .+++..|++.+|++||++    .+++.|+++..
T Consensus       224 ~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~  256 (325)
T cd05604         224 WSILEELLEKDRQRRLGAKEDFLEIQEHPFFES  256 (325)
T ss_pred             HHHHHHHhccCHHhcCCCCCCHHHHhcCCCcCC
Confidence            778999999999999987    48888888754

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.83  E-value=7.1e-21  Score=153.52  Aligned_cols=139  Identities=19%  Similarity=0.238  Sum_probs=101.2

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCc
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      ..||||+|+||+++.++.++++|||++....... .......++..|++||++.+..++.++|+||+|+++|++++|..|
T Consensus       119 i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p  197 (274)
T cd06609         119 KIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM-SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPP  197 (274)
T ss_pred             cccCCCCHHHEEECCCCCEEEcccccceeecccc-cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCC
Confidence            3699999999999999999999999987765322 122334677889999999888899999999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |.......                                          ....... .     ..+.+...   .....
T Consensus       198 ~~~~~~~~------------------------------------------~~~~~~~-~-----~~~~~~~~---~~~~~  226 (274)
T cd06609         198 LSDLHPMR------------------------------------------VLFLIPK-N-----NPPSLEGN---KFSKP  226 (274)
T ss_pred             cccCchHH------------------------------------------HHHHhhh-c-----CCCCCccc---ccCHH
Confidence            96433110                                          0000000 0     00111000   02234


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhcccC
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNFETT  195 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~  195 (231)
                      +.+++.+||..+|++|||++++++|.++...
T Consensus       227 ~~~~l~~~l~~~p~~Rpt~~~il~~~~~~~~  257 (274)
T cd06609         227 FKDFVSLCLNKDPKERPSAKELLKHKFIKKA  257 (274)
T ss_pred             HHHHHHHHhhCChhhCcCHHHHhhChhhcCC
Confidence            6778999999999999999999999988653

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.83  E-value=5.1e-21  Score=163.22  Aligned_cols=140  Identities=14%  Similarity=0.116  Sum_probs=105.9

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhh-----hCCCCCCcccHhHHHHHHHHHh
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIS-----TGRVSKELDVFSFRVVALEIAT   80 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~Dv~s~G~vl~el~~   80 (231)
                      .|||||.-|||++.+|.++|+|||++-.... ......+++||++|||||+..     ..+|+.++|||||||.+.||..
T Consensus       152 IHRDLKAGNiL~TldGdirLADFGVSAKn~~-t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAq  230 (1187)
T KOG0579|consen  152 IHRDLKAGNILLTLDGDIRLADFGVSAKNKS-TRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQ  230 (1187)
T ss_pred             hhhhccccceEEEecCcEeeecccccccchh-HHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhc
Confidence            5999999999999999999999999865432 122346789999999999863     4679999999999999999999


Q ss_pred             CCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHH
Q 045790           81 GRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQ  160 (231)
Q Consensus        81 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  160 (231)
                      +.+|....+....+..+.-..                                                .|.|  -.+..
T Consensus       231 iEPPHhelnpMRVllKiaKSe------------------------------------------------PPTL--lqPS~  260 (1187)
T KOG0579|consen  231 IEPPHHELNPMRVLLKIAKSE------------------------------------------------PPTL--LQPSH  260 (1187)
T ss_pred             cCCCccccchHHHHHHHhhcC------------------------------------------------CCcc--cCcch
Confidence            999987655432222221111                                                1111  11122


Q ss_pred             HHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          161 QMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       161 ~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                      =...|.+++.+||..||+.||++.+|++|+++....
T Consensus       261 Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~~~  296 (1187)
T KOG0579|consen  261 WSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQNAP  296 (1187)
T ss_pred             hhhHHHHHHHHHHhcCCccCCCHHHHhhCcccccCC
Confidence            345678899999999999999999999999987543

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=99.83  E-value=1e-21  Score=154.52  Aligned_cols=140  Identities=20%  Similarity=0.203  Sum_probs=108.0

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCc
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      +.|||||.-|||++-.|.+||+|||++-.+.+.. ....+.+||+.|||||++..-.|+.++||||+|+...||..|++|
T Consensus       150 KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTM-AKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PP  228 (502)
T KOG0574|consen  150 KIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTM-AKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPP  228 (502)
T ss_pred             HHHhhcccccEEEcccchhhhhhccccchhhhhH-HhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCC
Confidence            4699999999999999999999999998876543 344678999999999999988999999999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |.+..+.  ..-++.  +..+                                            .|.+  ..++.=...
T Consensus       229 YsDIHPM--RAIFMI--PT~P--------------------------------------------PPTF--~KPE~WS~~  258 (502)
T KOG0574|consen  229 YSDIHPM--RAIFMI--PTKP--------------------------------------------PPTF--KKPEEWSSE  258 (502)
T ss_pred             ccccccc--ceeEec--cCCC--------------------------------------------CCCC--CChHhhhhH
Confidence            9754321  000000  0000                                            0111  122334556


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhcccC
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNFETT  195 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~  195 (231)
                      |.++++.|+-..|++|.|+.++++|..-...
T Consensus       259 F~DFi~~CLiK~PE~R~TA~~L~~H~FiknA  289 (502)
T KOG0574|consen  259 FNDFIRSCLIKKPEERKTALRLCEHTFIKNA  289 (502)
T ss_pred             HHHHHHHHhcCCHHHHHHHHHHhhhhhhcCC
Confidence            8899999999999999999999999865443

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.83  E-value=7.2e-21  Score=154.56  Aligned_cols=140  Identities=19%  Similarity=0.208  Sum_probs=99.3

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhC---CCCCCcccHhHHHHHHHHHhCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTG---RVSKELDVFSFRVVALEIATGR   82 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~---~~~~~~Dv~s~G~vl~el~~g~   82 (231)
                      .||||||+||+++.++.++|+|||++.......  ......|+..|++||.+...   .++.++|+||+|++++++++|+
T Consensus       130 ~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~  207 (288)
T cd06616         130 IHRDVKPSNILLDRNGNIKLCDFGISGQLVDSI--AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGK  207 (288)
T ss_pred             eccCCCHHHEEEccCCcEEEeecchhHHhccCC--ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCC
Confidence            599999999999999999999999987653221  11233577889999998765   5788999999999999999999


Q ss_pred             CccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           83 KVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        83 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      .||.....                                         ......+....      ..+.+.........
T Consensus       208 ~p~~~~~~-----------------------------------------~~~~~~~~~~~------~~~~~~~~~~~~~~  240 (288)
T cd06616         208 FPYPKWNS-----------------------------------------VFDQLTQVVKG------DPPILSNSEEREFS  240 (288)
T ss_pred             CCchhcch-----------------------------------------HHHHHhhhcCC------CCCcCCCcCCCccC
Confidence            99964321                                         00000000000      00111111111233


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      ..+.+++.+||+.+|++|||+.+|+.|.++..
T Consensus       241 ~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~~  272 (288)
T cd06616         241 PSFVNFINLCLIKDESKRPKYKELLEHPFIKD  272 (288)
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHhcChhhhc
Confidence            45788999999999999999999999998754

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.83  E-value=9.3e-21  Score=153.50  Aligned_cols=134  Identities=18%  Similarity=0.150  Sum_probs=94.8

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCc-eeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPK-TIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~   83 (231)
                      .||||||+||+++.++.+||+|||++.......... .....++..|++||.+.+..++.++|+||+|++++++++ |..
T Consensus       144 ~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~  223 (280)
T cd05092         144 VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQ  223 (280)
T ss_pred             ecccccHhhEEEcCCCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCC
Confidence            599999999999999999999999987553221111 112234567999999988889999999999999999998 888


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||......+                                       .......    .         .....+.....
T Consensus       224 p~~~~~~~~---------------------------------------~~~~~~~----~---------~~~~~~~~~~~  251 (280)
T cd05092         224 PWYQLSNTE---------------------------------------AIECITQ----G---------RELERPRTCPP  251 (280)
T ss_pred             CCccCCHHH---------------------------------------HHHHHHc----C---------ccCCCCCCCCH
Confidence            886433211                                       0000000    0         00000111223


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHh
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLN  191 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~  191 (231)
                      .+.+++.+||+.||++||++.+|++.|+
T Consensus       252 ~~~~li~~cl~~~P~~Rp~~~~l~~~l~  279 (280)
T cd05092         252 EVYAIMQGCWQREPQQRMVIKDIHSRLQ  279 (280)
T ss_pred             HHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence            4678999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.83  E-value=1.2e-20  Score=151.03  Aligned_cols=136  Identities=23%  Similarity=0.224  Sum_probs=94.9

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCc---eeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhC-
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPK---TIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATG-   81 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g-   81 (231)
                      .||||||+||+++.++.+||+|||+++.........   .....++..|+|||.+....++.++||||+|++++++++| 
T Consensus       120 ~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~  199 (262)
T cd05058         120 VHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG  199 (262)
T ss_pred             cccccCcceEEEcCCCcEEECCccccccccCCcceeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCC
Confidence            599999999999999999999999987543211110   1123345679999999888889999999999999999995 


Q ss_pred             CCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHH
Q 045790           82 RKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQ  161 (231)
Q Consensus        82 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  161 (231)
                      ..||......                                       .+...+   .....      .    ..+...
T Consensus       200 ~~~~~~~~~~---------------------------------------~~~~~~---~~~~~------~----~~~~~~  227 (262)
T cd05058         200 APPYPDVDSF---------------------------------------DITVYL---LQGRR------L----LQPEYC  227 (262)
T ss_pred             CCCCCCCCHH---------------------------------------HHHHHH---hcCCC------C----CCCCcC
Confidence            5566432211                                       111111   10000      0    001111


Q ss_pred             HHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcc
Q 045790          162 MTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFE  193 (231)
Q Consensus       162 ~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~  193 (231)
                      ...+.+++..||+.+|++||++.+|+..++..
T Consensus       228 ~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~  259 (262)
T cd05058         228 PDPLYEVMLSCWHPKPEMRPTFSELVSRIEQI  259 (262)
T ss_pred             CHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence            24578899999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.83  E-value=1.3e-20  Score=150.89  Aligned_cols=135  Identities=21%  Similarity=0.169  Sum_probs=97.3

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~p   84 (231)
                      .||||||+||+++.++.++++|||++...............++..|++||.+....++.++|+||+|++++++++ |+.|
T Consensus       124 ~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p  203 (260)
T cd05067         124 IHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIP  203 (260)
T ss_pred             ecccccHHhEEEcCCCCEEEccCcceeecCCCCcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCC
Confidence            599999999999999999999999987654222111122344568999999987788899999999999999998 9999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |.......                                       ......             ..............
T Consensus       204 ~~~~~~~~---------------------------------------~~~~~~-------------~~~~~~~~~~~~~~  231 (260)
T cd05067         204 YPGMTNPE---------------------------------------VIQNLE-------------RGYRMPRPDNCPEE  231 (260)
T ss_pred             CCCCChHH---------------------------------------HHHHHH-------------cCCCCCCCCCCCHH
Confidence            96443211                                       111100             00000011112245


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      +.+++.+||+.+|++||++.+++..|+.
T Consensus       232 ~~~li~~~l~~~p~~Rp~~~~l~~~l~~  259 (260)
T cd05067         232 LYELMRLCWKEKPEERPTFEYLRSVLED  259 (260)
T ss_pred             HHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence            7889999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.83  E-value=9.9e-21  Score=156.77  Aligned_cols=169  Identities=18%  Similarity=0.077  Sum_probs=111.1

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCC--CceeEeeccccccchhhhhhC-CCCCCcccHhHHHHHHHHHhCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELG--PKTIMLVGTLAYMASEYISTG-RVSKELDVFSFRVVALEIATGR   82 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~el~~g~   82 (231)
                      +||||||.||+++.++.++|+|||++........  .......++..|++||.+.+. .++.++|+||+|++++++++|.
T Consensus       125 ~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~  204 (330)
T cd07834         125 IHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRK  204 (330)
T ss_pred             ecCCCCHHHEEEcCCCCEEEcccCceEeecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCC
Confidence            5999999999999999999999999987654321  112334677889999999777 6889999999999999999999


Q ss_pred             CccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           83 KVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        83 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      .||...........+...........+....               ......++........ .     .+ ........
T Consensus       205 ~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~-~-----~~-~~~~~~~~  262 (330)
T cd07834         205 PLFPGRDYIDQLNLIVEVLGTPSEEDLKFIT---------------SEKARNYLKSLPKKPK-K-----PL-SKLFPGAS  262 (330)
T ss_pred             CCcCCCCHHHHHHHHHHhcCCCChhHhhhcc---------------ccchhhHHhhcccCCc-c-----hh-HHhcccCC
Confidence            9998776555444444333222221111000               0011111111000000 0     00 00000123


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                      ..+.+++.+||+.+|++|||+.++++|+++....
T Consensus       263 ~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~  296 (330)
T cd07834         263 PEAIDLLEKMLVFDPKKRITADEALAHPYLAQLH  296 (330)
T ss_pred             HHHHHHHHHHccCChhhCCCHHHHHhCccHHhhc
Confidence            4578899999999999999999999999986543

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.83  E-value=5.8e-21  Score=155.20  Aligned_cols=138  Identities=19%  Similarity=0.120  Sum_probs=100.9

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+||+++.++.++|+|||++.......  ......|+..|++||++.+..++.++|+||+|+++|++++|..||
T Consensus       124 vH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf  201 (285)
T cd05605         124 VYRDLKPENILLDDYGHIRISDLGLAVEIPEGE--TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPF  201 (285)
T ss_pred             EecCCCHHHEEECCCCCEEEeeCCCceecCCCC--ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCC
Confidence            499999999999999999999999987654221  123346788999999998888899999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      ......                                      ..... +....     .     .....+.......+
T Consensus       202 ~~~~~~--------------------------------------~~~~~-~~~~~-----~-----~~~~~~~~~~~~~~  232 (285)
T cd05605         202 RQRKEK--------------------------------------VKREE-VERRV-----K-----EDQEEYSEKFSEAA  232 (285)
T ss_pred             CCCchh--------------------------------------hHHHH-HHHHh-----h-----hcccccCcccCHHH
Confidence            753311                                      00000 00000     0     00011112233456


Q ss_pred             HHHHHhhcCCCCCCCC-----CHHHHHHHHhccc
Q 045790          166 LIVGLWCAHPDRCFRP-----SIRQAIQVLNFET  194 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rp-----s~~ell~~l~~~~  194 (231)
                      ..++.+||+.||++||     ++.++++|.++..
T Consensus       233 ~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~  266 (285)
T cd05605         233 RSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRT  266 (285)
T ss_pred             HHHHHHHccCCHHHhcCCCCCCHHHHhcCcCccC
Confidence            7899999999999999     8999999998854

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.83  E-value=1.2e-20  Score=151.35  Aligned_cols=141  Identities=23%  Similarity=0.195  Sum_probs=100.8

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCc
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      -.|||||++||+++.++.++|+|||.+........   ....++..|++||.+.+..++.++|+||+|++++++++|..|
T Consensus       122 i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~---~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p  198 (265)
T cd06605         122 IIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLA---KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFP  198 (265)
T ss_pred             eecCCCCHHHEEECCCCCEEEeecccchhhHHHHh---hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence            35999999999999999999999999866532111   125678889999999888889999999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |.....                                     ................      .+.+...   .....
T Consensus       199 ~~~~~~-------------------------------------~~~~~~~~~~~~~~~~------~~~~~~~---~~~~~  232 (265)
T cd06605         199 YPPEND-------------------------------------PPDGIFELLQYIVNEP------PPRLPSG---KFSPD  232 (265)
T ss_pred             CCcccc-------------------------------------ccccHHHHHHHHhcCC------CCCCChh---hcCHH
Confidence            864321                                     0011111111111100      0111110   13345


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      +.+++..||..+|++|||+.+++.|+++..
T Consensus       233 ~~~li~~~l~~~p~~Rpt~~~ll~~~~~~~  262 (265)
T cd06605         233 FQDFVNLCLIKDPRERPSYKELLEHPFIKK  262 (265)
T ss_pred             HHHHHHHHcCCCchhCcCHHHHhhCchhhc
Confidence            778899999999999999999999998843

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.83  E-value=1.2e-20  Score=152.76  Aligned_cols=136  Identities=21%  Similarity=0.106  Sum_probs=97.8

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCc-eeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPK-TIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~   83 (231)
                      .||||||+||+++.++.+||+|||+++.+....... .....++..|+|||++.+..++.++||||+|+++|++++ |+.
T Consensus       139 ~H~di~p~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~  218 (280)
T cd05043         139 IHKDIAARNCVIDEELQVKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQT  218 (280)
T ss_pred             eecccCHhhEEEcCCCcEEECCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCC
Confidence            599999999999999999999999997654322111 112234567999999988888999999999999999998 999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||......                                       .+..+...   ...          .........
T Consensus       219 p~~~~~~~---------------------------------------~~~~~~~~---~~~----------~~~~~~~~~  246 (280)
T cd05043         219 PYVEIDPF---------------------------------------EMAAYLKD---GYR----------LAQPINCPD  246 (280)
T ss_pred             CcCcCCHH---------------------------------------HHHHHHHc---CCC----------CCCCCcCCH
Confidence            99653321                                       11111110   000          000111224


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhcc
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNFE  193 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~~  193 (231)
                      .+.+++.+||..+|++|||+.++++.|...
T Consensus       247 ~~~~li~~~l~~~p~~Rps~~~~~~~l~~~  276 (280)
T cd05043         247 ELFAVMACCWALDPEERPSFSQLVQCLTDF  276 (280)
T ss_pred             HHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence            578899999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.83  E-value=8.9e-21  Score=168.44  Aligned_cols=136  Identities=21%  Similarity=0.138  Sum_probs=104.6

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEee--ccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLV--GTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GR   82 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~--g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~   82 (231)
                      .||||..+|||+..+..+|++|||+++..............  -...|||||.+....|+.++||||||+++||+++ |.
T Consensus       440 vHRDLAaRNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~  519 (609)
T KOG0200|consen  440 VHRDLAARNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGG  519 (609)
T ss_pred             cchhhhhhhEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCC
Confidence            69999999999999999999999999865433222211111  2456999999988889999999999999999987 88


Q ss_pred             CccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           83 KVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        83 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      .||.+...                                      ...+..             .+.++.+...+..+.
T Consensus       520 ~PYp~~~~--------------------------------------~~~l~~-------------~l~~G~r~~~P~~c~  548 (609)
T KOG0200|consen  520 TPYPGIPP--------------------------------------TEELLE-------------FLKEGNRMEQPEHCS  548 (609)
T ss_pred             CCCCCCCc--------------------------------------HHHHHH-------------HHhcCCCCCCCCCCC
Confidence            89864220                                      111111             223444555666677


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      ..+..+|+.||+.+|++||++.++.+.+..
T Consensus       549 ~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~  578 (609)
T KOG0200|consen  549 DEIYDLMKSCWNADPEDRPTFSECVEFFEK  578 (609)
T ss_pred             HHHHHHHHHHhCCCcccCCCHHHHHHHHHH
Confidence            888999999999999999999999998887

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.83  E-value=2.9e-20  Score=163.81  Aligned_cols=158  Identities=16%  Similarity=0.032  Sum_probs=98.4

Q ss_pred             eecCCCCCCeeeCC-CCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhC----------------------CC
Q 045790            6 YSRSPELPPGRGDF-NFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTG----------------------RV   62 (231)
Q Consensus         6 ~~rdlk~~nil~~~-~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~----------------------~~   62 (231)
                      .||||||+|||++. ++.+||+|||+++.+..+.........+++.|+|||.+...                      .+
T Consensus       277 iHRDLKP~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~  356 (566)
T PLN03225        277 VHRDVKPQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNL  356 (566)
T ss_pred             EeCcCCHHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccC
Confidence            59999999999985 67899999999986643333333456788999999975321                      23


Q ss_pred             CCCcccHhHHHHHHHHHhCCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhc
Q 045790           63 SKELDVFSFRVVALEIATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGE  142 (231)
Q Consensus        63 ~~~~Dv~s~G~vl~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  142 (231)
                      ..++||||+||+++||+++..++...... +...+.                            .....+..|.......
T Consensus       357 ~~k~DVwSlGviL~el~~~~~~~~~~~~~-~~~~l~----------------------------~~~~~~~~~~~~~~~~  407 (566)
T PLN03225        357 PDRFDIYSAGLIFLQMAFPNLRSDSNLIQ-FNRQLK----------------------------RNDYDLVAWRKLVEPR  407 (566)
T ss_pred             CCCcccHHHHHHHHHHHhCcCCCchHHHH-HHHHHH----------------------------hcCCcHHHHHHhhccc
Confidence            34569999999999999876655432110 000000                            0001122222111100


Q ss_pred             chhhhhhcccccCccc--HHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCCCC
Q 045790          143 RKLLSAANERLDSRFD--EQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTMPN  198 (231)
Q Consensus       143 ~~~~~~~~~~l~~~~~--~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~~~  198 (231)
                            ..+.+...+.  ........+|+.+|++.||++|||+.++++|+++....+.
T Consensus       408 ------~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~ta~e~L~Hpff~~~~~~  459 (566)
T PLN03225        408 ------ASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRISAKAALAHPYFDREGLL  459 (566)
T ss_pred             ------cchhhhhhhhhccccchHHHHHHHHHccCCcccCCCHHHHhCCcCcCCCCcc
Confidence                  0000000000  0012245689999999999999999999999999775554

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.83  E-value=1.2e-20  Score=157.28  Aligned_cols=136  Identities=24%  Similarity=0.181  Sum_probs=95.0

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCC-ceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGP-KTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~   83 (231)
                      +||||||+||+++.++.+||+|||++......... ......++..|++||.+....++.++|+||+|++++++++ |..
T Consensus       201 ~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~  280 (343)
T cd05103         201 IHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS  280 (343)
T ss_pred             ecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCC
Confidence            59999999999999999999999998764322111 1112234567999999988888999999999999999996 888


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||......                                      ..+   ..... ....     ...    +.....
T Consensus       281 p~~~~~~~--------------------------------------~~~---~~~~~-~~~~-----~~~----~~~~~~  309 (343)
T cd05103         281 PYPGVKID--------------------------------------EEF---CRRLK-EGTR-----MRA----PDYTTP  309 (343)
T ss_pred             CCCCcccc--------------------------------------HHH---HHHHh-ccCC-----CCC----CCCCCH
Confidence            88543210                                      000   00000 0000     000    001123


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      .+.+++..||+.+|++|||+.+|+++|..
T Consensus       310 ~~~~~~~~cl~~~p~~Rps~~eil~~l~~  338 (343)
T cd05103         310 EMYQTMLDCWHGEPSQRPTFSELVEHLGN  338 (343)
T ss_pred             HHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence            56888999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.83  E-value=2.3e-20  Score=155.02  Aligned_cols=137  Identities=22%  Similarity=0.120  Sum_probs=97.9

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCc-eeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPK-TIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~   83 (231)
                      .||||||+||+++.++.+||+|||+++......... .....++..|++||++.+..++.++||||+|++++++++ |..
T Consensus       156 vH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~  235 (334)
T cd05100         156 IHRDLAARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGS  235 (334)
T ss_pred             eccccccceEEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCC
Confidence            599999999999999999999999987654321111 111233457999999988888999999999999999998 888


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||......+                                          +......          ......+.....
T Consensus       236 p~~~~~~~~------------------------------------------~~~~~~~----------~~~~~~~~~~~~  263 (334)
T cd05100         236 PYPGIPVEE------------------------------------------LFKLLKE----------GHRMDKPANCTH  263 (334)
T ss_pred             CCCCCCHHH------------------------------------------HHHHHHc----------CCCCCCCCCCCH
Confidence            886433221                                          1111100          000011112234


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      .+..++.+||+.+|++|||+.+++++|....
T Consensus       264 ~l~~li~~cl~~~p~~Rps~~ell~~l~~~~  294 (334)
T cd05100         264 ELYMIMRECWHAVPSQRPTFKQLVEDLDRVL  294 (334)
T ss_pred             HHHHHHHHHcccChhhCcCHHHHHHHHHHHh
Confidence            5778999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.83  E-value=1.6e-20  Score=151.04  Aligned_cols=133  Identities=20%  Similarity=0.174  Sum_probs=97.8

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .|||||+.||+++.++.++|+|||.+.......  ......++..|++||.+.+..++.++|+||+|+++|++++|+.||
T Consensus       136 ~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~  213 (269)
T cd08528         136 VHRDLTPNNIMLGEDDKVTITDFGLAKQKQPES--KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPF  213 (269)
T ss_pred             eecCCCHHHEEECCCCcEEEecccceeeccccc--ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcc
Confidence            599999999999999999999999987654322  223456788999999998877899999999999999999999998


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      .......                                          ...... .....    +.    ........+
T Consensus       214 ~~~~~~~------------------------------------------~~~~~~-~~~~~----~~----~~~~~~~~l  242 (269)
T cd08528         214 YSTNMLS------------------------------------------LATKIV-EAVYE----PL----PEGMYSEDV  242 (269)
T ss_pred             cccCHHH------------------------------------------HHHHHh-hccCC----cC----CcccCCHHH
Confidence            6433210                                          000000 00000    00    000122456


Q ss_pred             HHHHHhhcCCCCCCCCCHHHHHHHHh
Q 045790          166 LIVGLWCAHPDRCFRPSIRQAIQVLN  191 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps~~ell~~l~  191 (231)
                      .+++.+||+.||++||++.|+..+++
T Consensus       243 ~~li~~cl~~~p~~Rp~~~e~~~~~~  268 (269)
T cd08528         243 TDVITSCLTPDAEARPDIIQVSAMIS  268 (269)
T ss_pred             HHHHHHHCCCCCccCCCHHHHHHHhc
Confidence            78899999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.83  E-value=1.2e-20  Score=160.27  Aligned_cols=136  Identities=17%  Similarity=0.119  Sum_probs=97.6

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCC-ceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGP-KTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~   83 (231)
                      .||||||+||+++.++.+||+|||+++........ ......++..|+|||.+.+..++.++||||+|+++|++++ |..
T Consensus       259 vH~dikp~Nill~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~  338 (400)
T cd05105         259 VHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGT  338 (400)
T ss_pred             eCCCCChHhEEEeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCC
Confidence            59999999999999999999999998765332211 1222345678999999988888999999999999999997 888


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||.......                                      .+.    ......         .....+.....
T Consensus       339 P~~~~~~~~--------------------------------------~~~----~~~~~~---------~~~~~~~~~~~  367 (400)
T cd05105         339 PYPGMIVDS--------------------------------------TFY----NKIKSG---------YRMAKPDHATQ  367 (400)
T ss_pred             CCcccchhH--------------------------------------HHH----HHHhcC---------CCCCCCccCCH
Confidence            886432110                                      000    000000         00011112335


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      .+.+++.+||+.||++||++.+|.+.|..
T Consensus       368 ~l~~li~~cl~~dP~~RPt~~~l~~~l~~  396 (400)
T cd05105         368 EVYDIMVKCWNSEPEKRPSFLHLSDIVES  396 (400)
T ss_pred             HHHHHHHHHCccCHhHCcCHHHHHHHHHH
Confidence            67889999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.83  E-value=1.8e-20  Score=150.64  Aligned_cols=135  Identities=19%  Similarity=0.249  Sum_probs=95.9

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeE--eeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIM--LVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GR   82 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~--~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~   82 (231)
                      .||||||+||+++.++.+|++|||++.............  ...+..|++||++....++.++|+||+|+++|++++ |.
T Consensus       129 ~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~  208 (268)
T cd05063         129 VHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGE  208 (268)
T ss_pred             eccccchhhEEEcCCCcEEECCCccceecccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCC
Confidence            599999999999999999999999987654322111111  122346999999988788999999999999999987 99


Q ss_pred             CccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           83 KVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        83 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      .||......+....+.                                           .         ...........
T Consensus       209 ~p~~~~~~~~~~~~i~-------------------------------------------~---------~~~~~~~~~~~  236 (268)
T cd05063         209 RPYWDMSNHEVMKAIN-------------------------------------------D---------GFRLPAPMDCP  236 (268)
T ss_pred             CCCCcCCHHHHHHHHh-------------------------------------------c---------CCCCCCCCCCC
Confidence            9986433211111110                                           0         00001111223


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      ..+.+++.+||+.+|++||++.+|++.|..
T Consensus       237 ~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~  266 (268)
T cd05063         237 SAVYQLMLQCWQQDRARRPRFVDIVNLLDK  266 (268)
T ss_pred             HHHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence            457899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.83  E-value=1.3e-20  Score=153.99  Aligned_cols=141  Identities=20%  Similarity=0.206  Sum_probs=100.7

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+||+++.++.++|+|||++........ ......++..|++||.+.+..++.++|+||+|++++++++|+.||
T Consensus       138 ~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf  216 (296)
T cd06654         138 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY  216 (296)
T ss_pred             ccCCCCHHHEEEcCCCCEEECccccchhcccccc-ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCC
Confidence            4999999999999999999999998876532211 112346778999999998877889999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      .......                                         .+.. ......      +.+  ..+......+
T Consensus       217 ~~~~~~~-----------------------------------------~~~~-~~~~~~------~~~--~~~~~~~~~l  246 (296)
T cd06654         217 LNENPLR-----------------------------------------ALYL-IATNGT------PEL--QNPEKLSAIF  246 (296)
T ss_pred             CCCCHHH-----------------------------------------hHHH-HhcCCC------CCC--CCccccCHHH
Confidence            6433210                                         0000 000000      000  0011122446


Q ss_pred             HHHHHhhcCCCCCCCCCHHHHHHHHhcccCCC
Q 045790          166 LIVGLWCAHPDRCFRPSIRQAIQVLNFETTMP  197 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~~  197 (231)
                      .+++.+||+.+|++|||+.+++++.++....+
T Consensus       247 ~~li~~~l~~~p~~Rpt~~eil~~~~~~~~~~  278 (296)
T cd06654         247 RDFLNRCLDMDVEKRGSAKELLQHQFLKIAKP  278 (296)
T ss_pred             HHHHHHHCcCCcccCcCHHHHhhChhhhccCC
Confidence            78899999999999999999999998765433

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.83  E-value=1.4e-20  Score=158.48  Aligned_cols=84  Identities=24%  Similarity=0.203  Sum_probs=69.7

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhC----CCCCCcccHhHHHHHHHHHhC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTG----RVSKELDVFSFRVVALEIATG   81 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~----~~~~~~Dv~s~G~vl~el~~g   81 (231)
                      .||||||+|||++.++.+||+|||++...............|++.|+|||++...    .++.++||||+||++++|++|
T Consensus       164 vHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G  243 (371)
T cd05622         164 IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG  243 (371)
T ss_pred             EeCCCCHHHEEECCCCCEEEEeCCceeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhC
Confidence            5999999999999999999999999977643222223456789999999998653    278899999999999999999


Q ss_pred             CCccccch
Q 045790           82 RKVINRYK   89 (231)
Q Consensus        82 ~~p~~~~~   89 (231)
                      ..||....
T Consensus       244 ~~Pf~~~~  251 (371)
T cd05622         244 DTPFYADS  251 (371)
T ss_pred             CCCCCCCC
Confidence            99997543

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.83  E-value=1.1e-20  Score=159.66  Aligned_cols=84  Identities=24%  Similarity=0.207  Sum_probs=68.0

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCC----------------------------------------------
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELG----------------------------------------------   39 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~----------------------------------------------   39 (231)
                      .||||||+|||++.++.+||+|||++........                                              
T Consensus       123 vHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (381)
T cd05626         123 IHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQR  202 (381)
T ss_pred             eecCCcHHHEEECCCCCEEEeeCcCCcccccccccccccccccccccccCcccccccccccccccccchhhccccccccc
Confidence            5999999999999999999999998753310000                                              


Q ss_pred             CceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCccccch
Q 045790           40 PKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVINRYK   89 (231)
Q Consensus        40 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~~~~~   89 (231)
                      ......+|+..|+|||++.+..++.++||||+||++++|++|..||....
T Consensus       203 ~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~  252 (381)
T cd05626         203 CLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFLAPT  252 (381)
T ss_pred             cccccccCCccccCHHHHcCCCCCCccceeehhhHHHHHHhCCCCCcCCC
Confidence            00123468999999999988889999999999999999999999997543

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.83  E-value=4.4e-21  Score=156.99  Aligned_cols=167  Identities=14%  Similarity=0.032  Sum_probs=103.8

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhC-CCCCCcccHhHHHHHHHHHhCCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTG-RVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      .||||||+||+++.++.++|+|||++....... .......++..|++||.+.+. .++.++||||+|+++++|++|+.|
T Consensus       126 ~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~  204 (301)
T cd07873         126 LHRDLKPQNLLINERGELKLADFGLARAKSIPT-KTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPL  204 (301)
T ss_pred             eCCCCCHHHEEECCCCcEEECcCcchhccCCCC-CcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCC
Confidence            599999999999999999999999987643221 112233567889999998654 477889999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |......+....+...........+..+...           .      .+.     ...........+. .........
T Consensus       205 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~------~~~-----~~~~~~~~~~~~~-~~~~~~~~~  261 (301)
T cd07873         205 FPGSTVEEQLHFIFRILGTPTEETWPGILSN-----------E------EFK-----SYNYPKYRADCLH-NHAPRLDSD  261 (301)
T ss_pred             CCCCCHHHHHHHHHHHcCCCChhhchhhhcc-----------c------ccc-----ccccCccccccHH-hhcCCCCHH
Confidence            9766544333333322221111111000000           0      000     0000000000000 000011224


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                      +.+++.+|++.||.+|||+.|+++|.++....
T Consensus       262 ~~~li~~ml~~dp~~R~t~~eil~h~~f~~~~  293 (301)
T cd07873         262 GAELLSKLLQFEGRKRISAEEAMKHPYFHCLG  293 (301)
T ss_pred             HHHHHHHHhcCCcccCcCHHHHhcCccccccc
Confidence            56799999999999999999999999996543

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.83  E-value=1.9e-21  Score=176.32  Aligned_cols=139  Identities=22%  Similarity=0.190  Sum_probs=106.4

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCC---CceeEeeccccccchhhhhhCC---CCCCcccHhHHHHHHHH
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELG---PKTIMLVGTLAYMASEYISTGR---VSKELDVFSFRVVALEI   78 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~~g~~~y~aPE~~~~~~---~~~~~Dv~s~G~vl~el   78 (231)
                      ..|||||+.||+++.+|.+|++|||.++....+..   .......||+.|||||++.+..   -..++||||+|||+.||
T Consensus      1355 IVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM 1434 (1509)
T KOG4645|consen 1355 IVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEM 1434 (1509)
T ss_pred             ceecCCCccceeeecCCcEEeecccceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEe
Confidence            45999999999999999999999999987754321   1134568999999999996533   45679999999999999


Q ss_pred             HhCCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCccc
Q 045790           79 ATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFD  158 (231)
Q Consensus        79 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  158 (231)
                      +||+.|+...+..                                      =.++..             +..+..++++
T Consensus      1435 ~tGkrPW~~~dne--------------------------------------~aIMy~-------------V~~gh~Pq~P 1463 (1509)
T KOG4645|consen 1435 ATGKRPWAELDNE--------------------------------------WAIMYH-------------VAAGHKPQIP 1463 (1509)
T ss_pred             ecCCCchhhccch--------------------------------------hHHHhH-------------HhccCCCCCc
Confidence            9999999765421                                      111111             1233344555


Q ss_pred             HHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          159 EQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       159 ~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      ........+++.+|++.||..|+++.||++|-....
T Consensus      1464 ~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~~~ 1499 (1509)
T KOG4645|consen 1464 ERLSSEGRDFLEHCLEQDPKMRWTASQLLEHAFGKS 1499 (1509)
T ss_pred             hhhhHhHHHHHHHHHhcCchhhhHHHHHHHhhcccc
Confidence            556667788999999999999999999999876544

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.83  E-value=1.9e-20  Score=151.40  Aligned_cols=137  Identities=20%  Similarity=0.223  Sum_probs=100.0

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCc
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      ..|+||+|+||+++.++.++++|||++....... .......++..|++||++.+..++.++|+||+|++++++++|..|
T Consensus       122 ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p  200 (277)
T cd06642         122 KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ-IKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPP  200 (277)
T ss_pred             eeccCCChheEEEeCCCCEEEccccccccccCcc-hhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCC
Confidence            3599999999999999999999999987654321 112234577889999999887889999999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      +.......                                       ...+             +...............
T Consensus       201 ~~~~~~~~---------------------------------------~~~~-------------~~~~~~~~~~~~~~~~  228 (277)
T cd06642         201 NSDLHPMR---------------------------------------VLFL-------------IPKNSPPTLEGQYSKP  228 (277)
T ss_pred             Ccccchhh---------------------------------------HHhh-------------hhcCCCCCCCcccCHH
Confidence            86432110                                       0000             0000011111223345


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      +.+++.+||+.+|++||++.++++|.++..
T Consensus       229 ~~~li~~~l~~~p~~Rp~~~~il~~~~~~~  258 (277)
T cd06642         229 FKEFVEACLNKDPRFRPTAKELLKHKFITR  258 (277)
T ss_pred             HHHHHHHHccCCcccCcCHHHHHHhHHHHH
Confidence            778999999999999999999999988643

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.83  E-value=3.7e-20  Score=173.29  Aligned_cols=148  Identities=16%  Similarity=0.234  Sum_probs=111.1

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCc
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      ..|||+||+||+++.++..++. ||.......     .....++..|+|||++.+..++.++|||||||++||+++|+.|
T Consensus       804 iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p  877 (968)
T PLN00113        804 VVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCT-----DTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSP  877 (968)
T ss_pred             eecCCCCHHhEEECCCCceEEE-ecccccccc-----CCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCC
Confidence            3599999999999998888875 555433211     1123577899999999888899999999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccC--cccHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDS--RFDEQQM  162 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~  162 (231)
                      |....                                     .....+..|............+.++.+..  ..+..+.
T Consensus       878 ~~~~~-------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  920 (968)
T PLN00113        878 ADAEF-------------------------------------GVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEI  920 (968)
T ss_pred             CCccc-------------------------------------CCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHH
Confidence            85322                                     22334556665554444445555665533  2345677


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccC
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETT  195 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~  195 (231)
                      ..+.+++.+||+.||++||||.||++.|+....
T Consensus       921 ~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~  953 (968)
T PLN00113        921 VEVMNLALHCTATDPTARPCANDVLKTLESASR  953 (968)
T ss_pred             HHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhc
Confidence            789999999999999999999999999987543

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.83  E-value=1e-20  Score=153.13  Aligned_cols=80  Identities=25%  Similarity=0.252  Sum_probs=68.7

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+||+++.++.++|+|||++......  .......|+..|+|||++.+..++.++|+||+|+++|++++|..||
T Consensus       117 vH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~  194 (277)
T cd05607         117 VYRDMKPENVLLDDQGNCRLSDLGLAVELKDG--KTITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPF  194 (277)
T ss_pred             EEccCChHhEEEcCCCCEEEeeceeeeecCCC--ceeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCC
Confidence            59999999999999999999999998765432  1223346788999999998888999999999999999999999998


Q ss_pred             cc
Q 045790           86 NR   87 (231)
Q Consensus        86 ~~   87 (231)
                      ..
T Consensus       195 ~~  196 (277)
T cd05607         195 KD  196 (277)
T ss_pred             CC
Confidence            64

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.83  E-value=1.5e-20  Score=149.84  Aligned_cols=134  Identities=22%  Similarity=0.175  Sum_probs=94.3

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCce-eEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKT-IMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~-~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~   83 (231)
                      .||||||.||+++.++.+||+|||++........... .....+..|++||.+.+..++.++|+||+|++++++++ |..
T Consensus       116 ~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~  195 (252)
T cd05084         116 IHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAV  195 (252)
T ss_pred             cccccchheEEEcCCCcEEECccccCcccccccccccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCC
Confidence            5999999999999999999999999875442211111 11122346999999988888999999999999999997 888


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||.......                                       .....             ........+.....
T Consensus       196 p~~~~~~~~---------------------------------------~~~~~-------------~~~~~~~~~~~~~~  223 (252)
T cd05084         196 PYANLSNQQ---------------------------------------TREAI-------------EQGVRLPCPELCPD  223 (252)
T ss_pred             CccccCHHH---------------------------------------HHHHH-------------HcCCCCCCcccCCH
Confidence            885433210                                       00000             00001111112234


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHh
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLN  191 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~  191 (231)
                      .+.+++.+|++.+|++|||+.+|++.|.
T Consensus       224 ~~~~li~~~l~~~p~~Rps~~~~~~~l~  251 (252)
T cd05084         224 AVYRLMERCWEYDPGQRPSFSTVHQELQ  251 (252)
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence            6788999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.83  E-value=1.6e-20  Score=152.99  Aligned_cols=141  Identities=18%  Similarity=0.162  Sum_probs=95.8

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCc-eeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh--CC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPK-TIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT--GR   82 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~--g~   82 (231)
                      .||||||+||+++.++.++|+|||+++......... .....++..|++||.+.+..++.++||||+|++++++++  +.
T Consensus       152 ~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~  231 (296)
T cd05051         152 VHRDLATRNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCRE  231 (296)
T ss_pred             cccccchhceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCC
Confidence            599999999999999999999999987653221111 122345668999999988788999999999999999987  56


Q ss_pred             CccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           83 KVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        83 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      .||......                                       .....+.............      ..+....
T Consensus       232 ~p~~~~~~~---------------------------------------~~~~~~~~~~~~~~~~~~~------~~~~~~~  266 (296)
T cd05051         232 QPYEHLTDQ---------------------------------------QVIENAGHFFRDDGRQIYL------PRPPNCP  266 (296)
T ss_pred             CCCCCcChH---------------------------------------HHHHHHHhccccccccccC------CCccCCC
Confidence            676532211                                       1111111110000000000      0111122


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHh
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLN  191 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~  191 (231)
                      ..+.+++.+||+.||++|||+.+|++.|.
T Consensus       267 ~~l~~li~~cl~~~p~~Rpt~~el~~~L~  295 (296)
T cd05051         267 KDIYELMLECWRRDEEDRPTFREIHLFLQ  295 (296)
T ss_pred             HHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence            46889999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.83  E-value=5.4e-21  Score=154.84  Aligned_cols=142  Identities=20%  Similarity=0.146  Sum_probs=99.9

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .|+||||+||+++.++.++|+|||++......   ......++..|++||.+.+..++.++|+||+|+++|++++|+.||
T Consensus       117 ~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf  193 (279)
T cd06619         117 LHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS---IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPY  193 (279)
T ss_pred             eeCCCCHHHEEECCCCCEEEeeCCcceecccc---cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCc
Confidence            49999999999999999999999998765322   123346788999999998888899999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      ......                                   ........+..... ..     ..+.+..   ......+
T Consensus       194 ~~~~~~-----------------------------------~~~~~~~~~~~~~~-~~-----~~~~~~~---~~~~~~~  229 (279)
T cd06619         194 PQIQKN-----------------------------------QGSLMPLQLLQCIV-DE-----DPPVLPV---GQFSEKF  229 (279)
T ss_pred             hhhccc-----------------------------------ccccchHHHHHHHh-cc-----CCCCCCC---CcCCHHH
Confidence            643211                                   00000001100000 00     0011100   1112356


Q ss_pred             HHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          166 LIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      .+++.+|++.+|++||++.++++|+++..
T Consensus       230 ~~li~~~l~~~P~~Rp~~~eil~~~~~~~  258 (279)
T cd06619         230 VHFITQCMRKQPKERPAPENLMDHPFIVQ  258 (279)
T ss_pred             HHHHHHHhhCChhhCCCHHHHhcCccccc
Confidence            78899999999999999999999998744

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.83  E-value=1.8e-21  Score=160.56  Aligned_cols=135  Identities=19%  Similarity=0.136  Sum_probs=99.1

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+||+++.++.+||+|||++...... ........|+..|++||.+.+..++.++||||+||++++|++|+.||
T Consensus       120 ~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~-~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~  198 (318)
T cd05582         120 IYRDLKPENILLDEEGHIKLTDFGLSKESIDH-EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPF  198 (318)
T ss_pred             ecCCCCHHHeEECCCCcEEEeeccCCcccCCC-CCceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCC
Confidence            59999999999999999999999998765322 12233457899999999998878899999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      ...........+                                          ....       .    ..+......+
T Consensus       199 ~~~~~~~~~~~i------------------------------------------~~~~-------~----~~p~~~~~~~  225 (318)
T cd05582         199 QGKDRKETMTMI------------------------------------------LKAK-------L----GMPQFLSPEA  225 (318)
T ss_pred             CCCCHHHHHHHH------------------------------------------HcCC-------C----CCCCCCCHHH
Confidence            754322111111                                          0000       0    0111112345


Q ss_pred             HHHHHhhcCCCCCCCCC-----HHHHHHHHhccc
Q 045790          166 LIVGLWCAHPDRCFRPS-----IRQAIQVLNFET  194 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps-----~~ell~~l~~~~  194 (231)
                      ..++.+||+.||++||+     +.+++.|+++..
T Consensus       226 ~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~  259 (318)
T cd05582         226 QSLLRALFKRNPANRLGAGPDGVEEIKRHPFFST  259 (318)
T ss_pred             HHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCC
Confidence            78889999999999999     677888877643

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.83  E-value=2.1e-20  Score=154.00  Aligned_cols=137  Identities=22%  Similarity=0.151  Sum_probs=97.1

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCc-eeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPK-TIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~   83 (231)
                      .||||||+||+++.++.+||+|||+++......... .....++..|++||.+.+..++.++|+||+|+++|++++ |..
T Consensus       156 ~H~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~  235 (314)
T cd05099         156 IHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGS  235 (314)
T ss_pred             eeccccceeEEEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCC
Confidence            599999999999999999999999997654221111 111223457999999988888999999999999999998 888


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||........                                       .....    ..         .....+.....
T Consensus       236 p~~~~~~~~~---------------------------------------~~~~~----~~---------~~~~~~~~~~~  263 (314)
T cd05099         236 PYPGIPVEEL---------------------------------------FKLLR----EG---------HRMDKPSNCTH  263 (314)
T ss_pred             CCCCCCHHHH---------------------------------------HHHHH----cC---------CCCCCCCCCCH
Confidence            8864332111                                       11100    00         00011112233


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      .+.+++.+||+.+|++|||+.++++.|....
T Consensus       264 ~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~  294 (314)
T cd05099         264 ELYMLMRECWHAVPTQRPTFKQLVEALDKVL  294 (314)
T ss_pred             HHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence            5678999999999999999999999998644

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.82  E-value=2.5e-20  Score=148.85  Aligned_cols=135  Identities=24%  Similarity=0.222  Sum_probs=97.0

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCC--ceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGP--KTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GR   82 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~   82 (231)
                      +||||||+||+++.++.+||+|||++.........  ......++..|++||.+....++.++|+||+|+++++|++ |.
T Consensus       119 ~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~  198 (257)
T cd05040         119 IHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGE  198 (257)
T ss_pred             cccccCcccEEEecCCEEEeccccccccccccccceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCC
Confidence            59999999999999999999999998776432211  1122345678999999987888999999999999999998 99


Q ss_pred             CccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           83 KVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        83 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      .||......+....+.                                       .   ..       ...  ..+....
T Consensus       199 ~p~~~~~~~~~~~~~~---------------------------------------~---~~-------~~~--~~~~~~~  227 (257)
T cd05040         199 EPWAGLSGSQILKKID---------------------------------------K---EG-------ERL--ERPEACP  227 (257)
T ss_pred             CCCCCCCHHHHHHHHH---------------------------------------h---cC-------CcC--CCCccCC
Confidence            9986433221111100                                       0   00       000  0011123


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHh
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLN  191 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~  191 (231)
                      ..+.+++.+||+.+|++|||+.++++.|.
T Consensus       228 ~~~~~li~~~l~~~p~~Rps~~~~~~~l~  256 (257)
T cd05040         228 QDIYNVMLQCWAHNPADRPTFAALREFLP  256 (257)
T ss_pred             HHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence            45778999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.82  E-value=8.7e-21  Score=153.62  Aligned_cols=135  Identities=19%  Similarity=0.202  Sum_probs=95.6

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhh-----hCCCCCCcccHhHHHHHHHHHh
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIS-----TGRVSKELDVFSFRVVALEIAT   80 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~Dv~s~G~vl~el~~   80 (231)
                      .|||||++||+++.++.++|+|||++....... .......|+..|+|||.+.     ...++.++|+||+|+++|++++
T Consensus       143 vH~dl~~~nili~~~~~~~l~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~  221 (282)
T cd06636         143 IHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTV-GRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAE  221 (282)
T ss_pred             ccCCCCHHHEEECCCCCEEEeeCcchhhhhccc-cCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHh
Confidence            599999999999999999999999987543211 1123356788999999875     2347788999999999999999


Q ss_pred             CCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHH
Q 045790           81 GRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQ  160 (231)
Q Consensus        81 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  160 (231)
                      |..||..........                                      .    ..      ....+...   ...
T Consensus       222 g~~p~~~~~~~~~~~--------------------------------------~----~~------~~~~~~~~---~~~  250 (282)
T cd06636         222 GAPPLCDMHPMRALF--------------------------------------L----IP------RNPPPKLK---SKK  250 (282)
T ss_pred             CCCCccccCHHhhhh--------------------------------------h----Hh------hCCCCCCc---ccc
Confidence            999996433110000                                      0    00      00000000   011


Q ss_pred             HHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          161 QMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       161 ~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      ....+.+++.+||+.||.+||++.||++|.++
T Consensus       251 ~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~  282 (282)
T cd06636         251 WSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI  282 (282)
T ss_pred             cCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence            23457889999999999999999999998764

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.82  E-value=1.6e-20  Score=151.26  Aligned_cols=133  Identities=22%  Similarity=0.141  Sum_probs=94.0

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~p   84 (231)
                      .||||||+||+++.++.+|++|||++......  ........+..|++||++....++.++|+||||++++++++ |..|
T Consensus       134 ~H~dikp~nili~~~~~~kl~dfgl~~~~~~~--~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~p  211 (270)
T cd05047         134 IHRDLAARNILVGENYVAKIADFGLSRGQEVY--VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP  211 (270)
T ss_pred             eecccccceEEEcCCCeEEECCCCCccccchh--hhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCC
Confidence            59999999999999999999999998532211  01111223457999999877778999999999999999997 9999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |.......                                          ......          ..............
T Consensus       212 f~~~~~~~------------------------------------------~~~~~~----------~~~~~~~~~~~~~~  239 (270)
T cd05047         212 YCGMTCAE------------------------------------------LYEKLP----------QGYRLEKPLNCDDE  239 (270)
T ss_pred             ccccCHHH------------------------------------------HHHHHh----------CCCCCCCCCcCCHH
Confidence            86433211                                          010000          00000011112245


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      +.+++.+||+.+|.+|||+.++++.|..
T Consensus       240 ~~~li~~~l~~~p~~Rps~~~il~~l~~  267 (270)
T cd05047         240 VYDLMRQCWREKPYERPSFAQILVSLNR  267 (270)
T ss_pred             HHHHHHHHcccChhhCCCHHHHHHHHHH
Confidence            6789999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.82  E-value=1.9e-20  Score=149.21  Aligned_cols=136  Identities=21%  Similarity=0.174  Sum_probs=98.2

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      +||||+|.||+++.++.++|+|||++........ ......++..|++||++.+..++.++|+||+|++++++++|+.||
T Consensus       121 ~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~  199 (256)
T cd06612         121 IHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMA-KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPY  199 (256)
T ss_pred             ccCCCCcceEEECCCCcEEEcccccchhcccCcc-ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence            6999999999999999999999999876643221 223345778999999998878899999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      ...........+.                                            .    ...+.+  ..+......+
T Consensus       200 ~~~~~~~~~~~~~--------------------------------------------~----~~~~~~--~~~~~~~~~~  229 (256)
T cd06612         200 SDIHPMRAIFMIP--------------------------------------------N----KPPPTL--SDPEKWSPEF  229 (256)
T ss_pred             CCcchhhhhhhhc--------------------------------------------c----CCCCCC--CchhhcCHHH
Confidence            6543210000000                                            0    000000  0011122456


Q ss_pred             HHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          166 LIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      .+++.+||+.+|++|||+.+|++|.++
T Consensus       230 ~~~i~~~l~~~P~~Rps~~~il~~~~~  256 (256)
T cd06612         230 NDFVKKCLVKDPEERPSAIQLLQHPFI  256 (256)
T ss_pred             HHHHHHHHhcChhhCcCHHHHhcCCCC
Confidence            788999999999999999999998764

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.82  E-value=9.6e-21  Score=156.69  Aligned_cols=135  Identities=17%  Similarity=0.153  Sum_probs=98.5

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+|||++.++.+||+|||+++...... .......|+..|+|||++.+..++.++|+||+|+++++|++|..||
T Consensus       123 vHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf  201 (323)
T cd05615         123 IYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDG-VTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPF  201 (323)
T ss_pred             eccCCCHHHeEECCCCCEEEeccccccccCCCC-ccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCC
Confidence            499999999999999999999999987543211 1223456889999999998888899999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      ...........+                                          .. ..      ..    ++......+
T Consensus       202 ~~~~~~~~~~~i------------------------------------------~~-~~------~~----~p~~~~~~~  228 (323)
T cd05615         202 DGEDEDELFQSI------------------------------------------ME-HN------VS----YPKSLSKEA  228 (323)
T ss_pred             CCCCHHHHHHHH------------------------------------------Hh-CC------CC----CCccCCHHH
Confidence            754322111111                                          00 00      00    111122345


Q ss_pred             HHHHHhhcCCCCCCCCC-----HHHHHHHHhccc
Q 045790          166 LIVGLWCAHPDRCFRPS-----IRQAIQVLNFET  194 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps-----~~ell~~l~~~~  194 (231)
                      .+++.+|++.+|.+|++     ..++.+|.++..
T Consensus       229 ~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~  262 (323)
T cd05615         229 VSICKGLMTKHPSKRLGCGPEGERDIREHAFFRR  262 (323)
T ss_pred             HHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCC
Confidence            77899999999999997     578888877754

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.82  E-value=2.5e-20  Score=149.27  Aligned_cols=135  Identities=21%  Similarity=0.192  Sum_probs=97.2

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~p   84 (231)
                      .||||||+||+++.++.+||+|||.+...............++..|++||.+....++.++|+||+|++++++++ |..|
T Consensus       124 ~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p  203 (260)
T cd05073         124 IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIP  203 (260)
T ss_pred             cccccCcceEEEcCCCcEEECCCcceeeccCCCcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCC
Confidence            599999999999999999999999987654322221222344567999999987778999999999999999998 8999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |......                                       .+..+..+    .         ............
T Consensus       204 ~~~~~~~---------------------------------------~~~~~~~~----~---------~~~~~~~~~~~~  231 (260)
T cd05073         204 YPGMSNP---------------------------------------EVIRALER----G---------YRMPRPENCPEE  231 (260)
T ss_pred             CCCCCHH---------------------------------------HHHHHHhC----C---------CCCCCcccCCHH
Confidence            8643321                                       11111100    0         000011122345


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      +.+++.+||+.+|++||++.+++..|..
T Consensus       232 ~~~~i~~~l~~~p~~Rp~~~~l~~~L~~  259 (260)
T cd05073         232 LYNIMMRCWKNRPEERPTFEYIQSVLDD  259 (260)
T ss_pred             HHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence            7789999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.82  E-value=2.1e-20  Score=150.10  Aligned_cols=138  Identities=22%  Similarity=0.189  Sum_probs=99.7

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+||+++.++.++++|||++....... .......++..|+|||.+.+..++.++|+||+|+++|++++|..||
T Consensus       128 ~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~-~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~  206 (267)
T cd08228         128 MHRDIKPANVFITATGVVKLGDLGLGRFFSSKT-TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPF  206 (267)
T ss_pred             eCCCCCHHHEEEcCCCCEEECccccceeccchh-HHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCC
Confidence            599999999999999999999999987654321 1122345778899999998777889999999999999999999998


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      .....                                        ....+..... ..        .............+
T Consensus       207 ~~~~~----------------------------------------~~~~~~~~~~-~~--------~~~~~~~~~~~~~~  237 (267)
T cd08228         207 YGDKM----------------------------------------NLFSLCQKIE-QC--------DYPPLPTEHYSEKL  237 (267)
T ss_pred             ccccc----------------------------------------cHHHHHHHHh-cC--------CCCCCChhhcCHHH
Confidence            54221                                        1111111110 00        00011112233567


Q ss_pred             HHHHHhhcCCCCCCCCCHHHHHHHHhcc
Q 045790          166 LIVGLWCAHPDRCFRPSIRQAIQVLNFE  193 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps~~ell~~l~~~  193 (231)
                      .+++.+||+.+|++||++.++++.+...
T Consensus       238 ~~li~~cl~~~p~~Rp~~~~vl~~~~~~  265 (267)
T cd08228         238 RELVSMCIYPDPDQRPDIGYVHQIAKQM  265 (267)
T ss_pred             HHHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence            8899999999999999999999998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=99.82  E-value=2.3e-20  Score=167.42  Aligned_cols=87  Identities=25%  Similarity=0.308  Sum_probs=76.2

Q ss_pred             eeee-ecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhh-----CCCCCCcccHhHHHHHH
Q 045790            3 EVAY-SRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIST-----GRVSKELDVFSFRVVAL   76 (231)
Q Consensus         3 ~~~~-~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-----~~~~~~~Dv~s~G~vl~   76 (231)
                      ++|| ||||||+|||+|..|++||+|||.|..+..+....+...+||+-|.+||++..     +.|...+|.||+|+.+|
T Consensus       193 ~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~Y  272 (1317)
T KOG0612|consen  193 SMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMY  272 (1317)
T ss_pred             hccceeccCCcceeEecccCcEeeccchhHHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHH
Confidence            4788 99999999999999999999999998887555555677899999999999952     45889999999999999


Q ss_pred             HHHhCCCccccch
Q 045790           77 EIATGRKVINRYK   89 (231)
Q Consensus        77 el~~g~~p~~~~~   89 (231)
                      ||+.|..||....
T Consensus       273 EMlyG~TPFYads  285 (1317)
T KOG0612|consen  273 EMLYGETPFYADS  285 (1317)
T ss_pred             HHHcCCCcchHHH
Confidence            9999999996543

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.82  E-value=6.2e-21  Score=154.59  Aligned_cols=83  Identities=28%  Similarity=0.235  Sum_probs=67.2

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhC-CCCCCcccHhHHHHHHHHHhCCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTG-RVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      .||||||+||+++.++.++|+|||++....... .......++..|+|||.+.+. .++.++|+||+|++++++++|+.|
T Consensus       123 ~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~  201 (285)
T cd07861         123 LHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV-RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPL  201 (285)
T ss_pred             eecCCCHHHEEEcCCCcEEECcccceeecCCCc-ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCC
Confidence            599999999999999999999999987654321 112234567889999998654 468889999999999999999999


Q ss_pred             cccch
Q 045790           85 INRYK   89 (231)
Q Consensus        85 ~~~~~   89 (231)
                      |....
T Consensus       202 ~~~~~  206 (285)
T cd07861         202 FHGDS  206 (285)
T ss_pred             CCCCC
Confidence            97544

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.82  E-value=2e-20  Score=152.57  Aligned_cols=143  Identities=20%  Similarity=0.185  Sum_probs=102.4

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+||+++.++.++|+|||++....... .......++..|+|||.+.+..++.++|+||+|++++++++|+.||
T Consensus       140 vH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~  218 (292)
T cd06658         140 IHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEV-PKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPY  218 (292)
T ss_pred             eecCCCHHHEEEcCCCCEEEccCcchhhccccc-ccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence            599999999999999999999999987553222 1223456788999999998778899999999999999999999998


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      ........                                       ..   ..      .....+.+...  ......+
T Consensus       219 ~~~~~~~~---------------------------------------~~---~~------~~~~~~~~~~~--~~~~~~~  248 (292)
T cd06658         219 FNEPPLQA---------------------------------------MR---RI------RDNLPPRVKDS--HKVSSVL  248 (292)
T ss_pred             CCCCHHHH---------------------------------------HH---HH------HhcCCCccccc--cccCHHH
Confidence            64332100                                       00   00      00011111110  0112345


Q ss_pred             HHHHHhhcCCCCCCCCCHHHHHHHHhcccCCCCC
Q 045790          166 LIVGLWCAHPDRCFRPSIRQAIQVLNFETTMPNL  199 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~~~~  199 (231)
                      ..++.+||..||.+|||+.++++|.++....++.
T Consensus       249 ~~li~~~l~~~P~~Rpt~~~il~~~~~~~~~~~~  282 (292)
T cd06658         249 RGFLDLMLVREPSQRATAQELLQHPFLKLAGPPS  282 (292)
T ss_pred             HHHHHHHccCChhHCcCHHHHhhChhhhccCCcc
Confidence            6788899999999999999999999987655444

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.82  E-value=2.5e-20  Score=148.35  Aligned_cols=134  Identities=19%  Similarity=0.145  Sum_probs=94.7

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCce-eEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKT-IMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~-~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~   83 (231)
                      .||||||+||+++.++.++|+|||++........... .....+..|++||.+.+..++.++|+||+|++++++++ |..
T Consensus       115 ~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~  194 (251)
T cd05041         115 IHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDT  194 (251)
T ss_pred             ehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCC
Confidence            5999999999999999999999999876542211111 11223456999999887788999999999999999998 788


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||.......                                       ......             .......+.....
T Consensus       195 p~~~~~~~~---------------------------------------~~~~~~-------------~~~~~~~~~~~~~  222 (251)
T cd05041         195 PYPGMSNQQ---------------------------------------TRERIE-------------SGYRMPAPQLCPE  222 (251)
T ss_pred             CCccCCHHH---------------------------------------HHHHHh-------------cCCCCCCCccCCH
Confidence            886433210                                       000000             0000001112234


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHh
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLN  191 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~  191 (231)
                      .+.+++.+||+.+|++|||+.+|++.|.
T Consensus       223 ~~~~li~~~l~~~p~~Rp~~~ell~~l~  250 (251)
T cd05041         223 EIYRLMLQCWAYDPENRPSFSEIYNELQ  250 (251)
T ss_pred             HHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence            6788999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.82  E-value=1.9e-20  Score=142.74  Aligned_cols=134  Identities=14%  Similarity=0.062  Sum_probs=105.5

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCc
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      ..||||||.|+|++..+.+|++|||-+..-.   .....+.+||.-|.+||...+...+..+|+|++|++.+|++.|.+|
T Consensus       145 VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p---~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~pp  221 (281)
T KOG0580|consen  145 VIHRDIKPENLLLGSAGELKIADFGWSVHAP---SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPP  221 (281)
T ss_pred             cccCCCCHHHhccCCCCCeeccCCCceeecC---CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCc
Confidence            4699999999999999999999999987643   3445778999999999999988999999999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |......+...++..                                              .+...|       ......
T Consensus       222 Fes~~~~etYkrI~k----------------------------------------------~~~~~p-------~~is~~  248 (281)
T KOG0580|consen  222 FESQSHSETYKRIRK----------------------------------------------VDLKFP-------STISGG  248 (281)
T ss_pred             hhhhhhHHHHHHHHH----------------------------------------------ccccCC-------cccChh
Confidence            987654322222210                                              011111       222344


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      ..+++.+|+..+|.+|.+..|+++|+|-.+
T Consensus       249 a~dlI~~ll~~~p~~r~~l~~v~~hpwI~a  278 (281)
T KOG0580|consen  249 AADLISRLLVKNPIERLALTEVMDHPWIVA  278 (281)
T ss_pred             HHHHHHHHhccCccccccHHHHhhhHHHHh
Confidence            567889999999999999999999998543

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.82  E-value=8.9e-21  Score=154.15  Aligned_cols=138  Identities=17%  Similarity=0.113  Sum_probs=99.6

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+||+++.++.++|+|||++.......  ......|+..|+|||++.+..++.++|+||+|++++++++|..||
T Consensus       124 iH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf  201 (285)
T cd05630         124 VYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ--TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPF  201 (285)
T ss_pred             EeCCCCHHHEEECCCCCEEEeeccceeecCCCc--cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCC
Confidence            499999999999999999999999987654221  112346888999999998888999999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      ......                                   ............      .    ......    .....+
T Consensus       202 ~~~~~~-----------------------------------~~~~~~~~~~~~------~----~~~~~~----~~~~~~  232 (285)
T cd05630         202 QQRKKK-----------------------------------IKREEVERLVKE------V----QEEYSE----KFSPDA  232 (285)
T ss_pred             CCCCcc-----------------------------------chHHHHHhhhhh------h----hhhcCc----cCCHHH
Confidence            643210                                   000000000000      0    001111    122346


Q ss_pred             HHHHHhhcCCCCCCCCC-----HHHHHHHHhccc
Q 045790          166 LIVGLWCAHPDRCFRPS-----IRQAIQVLNFET  194 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps-----~~ell~~l~~~~  194 (231)
                      .+++..||+.||++|||     +.|+++|.++..
T Consensus       233 ~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~  266 (285)
T cd05630         233 RSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQ  266 (285)
T ss_pred             HHHHHHHhhcCHHHccCCCCCchHHHHcChhhhc
Confidence            78899999999999999     999999999864

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.82  E-value=2.2e-20  Score=153.75  Aligned_cols=138  Identities=17%  Similarity=0.088  Sum_probs=99.7

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCC----------------------------ceeEeeccccccchhhh
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGP----------------------------KTIMLVGTLAYMASEYI   57 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~----------------------------~~~~~~g~~~y~aPE~~   57 (231)
                      +||||||+||+++.++.++|+|||++.........                            ......|+..|++||++
T Consensus       125 ~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~  204 (316)
T cd05574         125 VYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVI  204 (316)
T ss_pred             eccCCChHHeEEcCCCCEEEeecchhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHH
Confidence            59999999999999999999999998654321110                            01123578889999999


Q ss_pred             hhCCCCCCcccHhHHHHHHHHHhCCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHH
Q 045790           58 STGRVSKELDVFSFRVVALEIATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVW  137 (231)
Q Consensus        58 ~~~~~~~~~Dv~s~G~vl~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  137 (231)
                      .+..++.++||||+|+++|++++|..||...........                                         
T Consensus       205 ~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~-----------------------------------------  243 (316)
T cd05574         205 SGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDETFSN-----------------------------------------  243 (316)
T ss_pred             cCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchHHHHHH-----------------------------------------
Confidence            888889999999999999999999999965432110000                                         


Q ss_pred             HHhhcchhhhhhcccccCcccHHHHHHHHHHHHhhcCCCCCCCCC----HHHHHHHHhccc
Q 045790          138 DLYGERKLLSAANERLDSRFDEQQMTCLLIVGLWCAHPDRCFRPS----IRQAIQVLNFET  194 (231)
Q Consensus       138 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~c~~~dp~~Rps----~~ell~~l~~~~  194 (231)
                       .         .+..............+.+++.+||+.+|++|||    +.++++|.++..
T Consensus       244 -~---------~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~~  294 (316)
T cd05574         244 -I---------LKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFRG  294 (316)
T ss_pred             -H---------hcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchhhc
Confidence             0         0000000000112356788999999999999999    999999998865

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.82  E-value=1.8e-20  Score=153.64  Aligned_cols=136  Identities=21%  Similarity=0.160  Sum_probs=96.5

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCc-eeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPK-TIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~   83 (231)
                      .|+||||+||+++.++.++++|||++.......... .....++..|++||.+.+..++.++||||+|++++++++ |..
T Consensus       163 vH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~  242 (302)
T cd05055         163 IHRDLAARNVLLTHGKIVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSN  242 (302)
T ss_pred             ehhhhccceEEEcCCCeEEECCCcccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCC
Confidence            599999999999999999999999987654322111 112234567999999988888999999999999999998 999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||......                                      ..+.....             .......+.....
T Consensus       243 p~~~~~~~--------------------------------------~~~~~~~~-------------~~~~~~~~~~~~~  271 (302)
T cd05055         243 PYPGMPVD--------------------------------------SKFYKLIK-------------EGYRMAQPEHAPA  271 (302)
T ss_pred             CcCCCCch--------------------------------------HHHHHHHH-------------cCCcCCCCCCCCH
Confidence            98643211                                      00101100             0000000111124


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      .+.+++.+||+.+|++|||+.+|++.|..
T Consensus       272 ~~~~li~~cl~~~p~~Rpt~~ell~~l~~  300 (302)
T cd05055         272 EIYDIMKTCWDADPLKRPTFKQIVQLIGK  300 (302)
T ss_pred             HHHHHHHHHcCCCchhCcCHHHHHHHHHh
Confidence            57889999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.82  E-value=2.2e-20  Score=149.72  Aligned_cols=139  Identities=20%  Similarity=0.242  Sum_probs=99.1

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCC---ceeEeeccccccchhhhhhC-CCCCCcccHhHHHHHHHHHhC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGP---KTIMLVGTLAYMASEYISTG-RVSKELDVFSFRVVALEIATG   81 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~---~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~el~~g   81 (231)
                      .||||||+||+++.++.++|+|||++..+......   ......|+..|++||++... .++.++|+||+|++++++++|
T Consensus       124 ~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g  203 (267)
T cd06610         124 IHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATG  203 (267)
T ss_pred             ecCCCCHHhEEEcCCCCEEEcccchHHHhccCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhC
Confidence            59999999999999999999999998766543222   12334678899999998766 688999999999999999999


Q ss_pred             CCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCccc-HH
Q 045790           82 RKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFD-EQ  160 (231)
Q Consensus        82 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~  160 (231)
                      +.||............                                      ..    .      ..+.+..... ..
T Consensus       204 ~~p~~~~~~~~~~~~~--------------------------------------~~----~------~~~~~~~~~~~~~  235 (267)
T cd06610         204 AAPYSKYPPMKVLMLT--------------------------------------LQ----N------DPPSLETGADYKK  235 (267)
T ss_pred             CCCccccChhhhHHHH--------------------------------------hc----C------CCCCcCCcccccc
Confidence            9999654321100000                                      00    0      0001100000 12


Q ss_pred             HHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          161 QMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       161 ~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      ....+.+++.+||+.||++||++.+|++|+++
T Consensus       236 ~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~  267 (267)
T cd06610         236 YSKSFRKMISLCLQKDPSKRPTAEELLKHKFF  267 (267)
T ss_pred             ccHHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence            23456789999999999999999999999864

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.82  E-value=2.4e-20  Score=151.16  Aligned_cols=140  Identities=15%  Similarity=0.103  Sum_probs=98.5

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhh-----hCCCCCCcccHhHHHHHHHHH
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIS-----TGRVSKELDVFSFRVVALEIA   79 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~Dv~s~G~vl~el~   79 (231)
                      -+||||||+||+++.++.++|+|||++....... .......++..|++||.+.     ...++.++|+||+|+++|+++
T Consensus       124 i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~  202 (282)
T cd06643         124 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI-QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMA  202 (282)
T ss_pred             eeecCCCcccEEEccCCCEEEccccccccccccc-cccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHc
Confidence            3699999999999999999999999986543211 1123346788999999973     334678899999999999999


Q ss_pred             hCCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccH
Q 045790           80 TGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDE  159 (231)
Q Consensus        80 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  159 (231)
                      +|+.||...........+.                                          ...      .+..  ..+.
T Consensus       203 ~g~~p~~~~~~~~~~~~~~------------------------------------------~~~------~~~~--~~~~  232 (282)
T cd06643         203 QIEPPHHELNPMRVLLKIA------------------------------------------KSE------PPTL--AQPS  232 (282)
T ss_pred             cCCCCccccCHHHHHHHHh------------------------------------------hcC------CCCC--CCcc
Confidence            9999986543211100000                                          000      0000  0011


Q ss_pred             HHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccC
Q 045790          160 QQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETT  195 (231)
Q Consensus       160 ~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~  195 (231)
                      .....+.+++.+||+.+|++||++.++++|+++...
T Consensus       233 ~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~  268 (282)
T cd06643         233 RWSSEFKDFLKKCLEKNVDARWTTTQLLQHPFVTVN  268 (282)
T ss_pred             ccCHHHHHHHHHHccCChhhCcCHHHHhcCCCEecc
Confidence            112456789999999999999999999999997653

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.82  E-value=1.6e-20  Score=150.74  Aligned_cols=135  Identities=16%  Similarity=0.173  Sum_probs=97.8

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCC-----ceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGP-----KTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT   80 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~-----~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~   80 (231)
                      .||||||+||+++.++.++|+|||.++........     ......|+..|++||.+.+..++.++|+|++|++++++++
T Consensus       128 vH~di~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~  207 (267)
T cd06628         128 IHRDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLT  207 (267)
T ss_pred             ccccCCHHHEEEcCCCCEEecccCCCcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhh
Confidence            49999999999999999999999998766422111     1122457788999999988788899999999999999999


Q ss_pred             CCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHH
Q 045790           81 GRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQ  160 (231)
Q Consensus        81 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  160 (231)
                      |+.||......                                         .. +...      .....+    ..+..
T Consensus       208 g~~p~~~~~~~-----------------------------------------~~-~~~~------~~~~~~----~~~~~  235 (267)
T cd06628         208 GKHPFPDCTQL-----------------------------------------QA-IFKI------GENASP----EIPSN  235 (267)
T ss_pred             CCCCCCCccHH-----------------------------------------HH-HHHH------hccCCC----cCCcc
Confidence            99999643211                                         00 0000      000011    11122


Q ss_pred             HHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          161 QMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       161 ~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      ....+..++.+||+.||++||++.+|++|.++
T Consensus       236 ~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~  267 (267)
T cd06628         236 ISSEAIDFLEKTFEIDHNKRPTAAELLKHPFL  267 (267)
T ss_pred             cCHHHHHHHHHHccCCchhCcCHHHHhhCCCC
Confidence            23456788999999999999999999998764

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.82  E-value=5.8e-21  Score=154.87  Aligned_cols=85  Identities=21%  Similarity=0.181  Sum_probs=70.5

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhC-CCCCCcccHhHHHHHHHHHhCCC
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTG-RVSKELDVFSFRVVALEIATGRK   83 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~el~~g~~   83 (231)
                      ..||||++.||+++.++.+||+|||++...............++..|++||++... .++.++|+||+|++++++++|..
T Consensus       121 i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~  200 (288)
T cd07833         121 IIHRDIKPENILVSESGVLKLCDFGFARALRARPASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEP  200 (288)
T ss_pred             eecCCCCHHHeEECCCCCEEEEeeecccccCCCccccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCC
Confidence            36999999999999999999999999877654332223345677889999999777 68899999999999999999999


Q ss_pred             ccccch
Q 045790           84 VINRYK   89 (231)
Q Consensus        84 p~~~~~   89 (231)
                      ||....
T Consensus       201 ~~~~~~  206 (288)
T cd07833         201 LFPGDS  206 (288)
T ss_pred             CCCCCC
Confidence            987543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.82  E-value=3.3e-21  Score=159.84  Aligned_cols=136  Identities=18%  Similarity=0.104  Sum_probs=97.8

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhC-CCCCCcccHhHHHHHHHHHhCCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTG-RVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      .||||||+|||++.++.++|+|||++...... ........|+..|+|||++.+. .++.++||||+||++++|++|+.|
T Consensus       118 vHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~P  196 (330)
T cd05586         118 VYRDLKPENILLDATGHIALCDFGLSKANLTD-NKTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSP  196 (330)
T ss_pred             EeccCCHHHeEECCCCCEEEecCCcCcCCCCC-CCCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCC
Confidence            59999999999999999999999998653221 1122345789999999998654 478999999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |........                                          ...... ..      ..+...   .....
T Consensus       197 f~~~~~~~~------------------------------------------~~~i~~-~~------~~~~~~---~~~~~  224 (330)
T cd05586         197 FYAEDTQQM------------------------------------------YRNIAF-GK------VRFPKN---VLSDE  224 (330)
T ss_pred             CCCCCHHHH------------------------------------------HHHHHc-CC------CCCCCc---cCCHH
Confidence            965432211                                          111100 00      000000   11234


Q ss_pred             HHHHHHhhcCCCCCCCC----CHHHHHHHHhccc
Q 045790          165 LLIVGLWCAHPDRCFRP----SIRQAIQVLNFET  194 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rp----s~~ell~~l~~~~  194 (231)
                      +.+++.+||+.||.+||    ++.++++|+++..
T Consensus       225 ~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~  258 (330)
T cd05586         225 GRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFAD  258 (330)
T ss_pred             HHHHHHHHcCCCHHHCCCCCCCHHHHhcCccccC
Confidence            56789999999999998    7999999998854

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.82  E-value=3.6e-20  Score=147.74  Aligned_cols=134  Identities=22%  Similarity=0.186  Sum_probs=98.0

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCC-CceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELG-PKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~   83 (231)
                      .||||||+||+++.++.++|+|||.+........ .......++..|+|||.+....++.++|+||+|++++++++ |..
T Consensus       127 ~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~  206 (262)
T cd00192         127 VHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGAT  206 (262)
T ss_pred             ccCccCcceEEECCCCcEEEcccccccccccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCC
Confidence            4999999999999999999999999977653221 11233456778999999987788999999999999999998 588


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||.......                                       +..   ....          ......+.....
T Consensus       207 p~~~~~~~~---------------------------------------~~~---~~~~----------~~~~~~~~~~~~  234 (262)
T cd00192         207 PYPGLSNEE---------------------------------------VLE---YLRK----------GYRLPKPEYCPD  234 (262)
T ss_pred             CCCCCCHHH---------------------------------------HHH---HHHc----------CCCCCCCccCCh
Confidence            886543221                                       111   1100          000111122245


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHh
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLN  191 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~  191 (231)
                      .+..++.+||+.+|++|||+.+++++|.
T Consensus       235 ~~~~li~~~l~~~p~~Rps~~~l~~~l~  262 (262)
T cd00192         235 ELYELMLSCWQLDPEDRPTFSELVERLE  262 (262)
T ss_pred             HHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence            6788999999999999999999999874

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.82  E-value=4.1e-20  Score=149.44  Aligned_cols=136  Identities=19%  Similarity=0.201  Sum_probs=101.2

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .|+||+|+||+++.++.++++|||++........ ......++..|++||++.+..++.++|+||+|++++++++|..||
T Consensus       123 vH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~  201 (277)
T cd06640         123 IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI-KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPN  201 (277)
T ss_pred             cCcCCChhhEEEcCCCCEEEcccccceeccCCcc-ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCC
Confidence            4999999999999999999999999876543221 122345677899999998778899999999999999999999998


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      ..........                                                    .................+
T Consensus       202 ~~~~~~~~~~----------------------------------------------------~~~~~~~~~~~~~~~~~~  229 (277)
T cd06640         202 SDMHPMRVLF----------------------------------------------------LIPKNNPPTLTGEFSKPF  229 (277)
T ss_pred             CCcChHhHhh----------------------------------------------------hhhcCCCCCCchhhhHHH
Confidence            6433210000                                                    000011112223344567


Q ss_pred             HHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          166 LIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      .+++.+||+.+|++||++.++++|.++..
T Consensus       230 ~~li~~~l~~~p~~Rp~~~~il~~~~~~~  258 (277)
T cd06640         230 KEFIDACLNKDPSFRPTAKELLKHKFIVK  258 (277)
T ss_pred             HHHHHHHcccCcccCcCHHHHHhChHhhh
Confidence            88999999999999999999999988744

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.82  E-value=1e-19  Score=145.86  Aligned_cols=137  Identities=23%  Similarity=0.185  Sum_probs=99.5

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+||+++.++.++++|||++........ ......++..|++||.+.+..++.++|+||+|+++|++++|+.||
T Consensus       128 ~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~  206 (267)
T cd08224         128 MHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPF  206 (267)
T ss_pred             ecCCcChhhEEECCCCcEEEeccceeeeccCCCc-ccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCc
Confidence            5999999999999999999999999876543221 123346788899999998888899999999999999999999998


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCccc-HHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFD-EQQMTC  164 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~  164 (231)
                      ....                                        ............          ......+ ......
T Consensus       207 ~~~~----------------------------------------~~~~~~~~~~~~----------~~~~~~~~~~~~~~  236 (267)
T cd08224         207 YGDK----------------------------------------MNLYSLCKKIEK----------CDYPPLPADHYSEE  236 (267)
T ss_pred             ccCC----------------------------------------ccHHHHHhhhhc----------CCCCCCChhhcCHH
Confidence            5322                                        011111111100          0000111 123345


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhcc
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNFE  193 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~~  193 (231)
                      +..++.+||+.+|++|||+.+|++.+...
T Consensus       237 ~~~~i~~cl~~~p~~Rp~~~~il~~~~~~  265 (267)
T cd08224         237 LRDLVSRCINPDPEKRPDISYVLQVAKEM  265 (267)
T ss_pred             HHHHHHHHcCCCcccCCCHHHHHHHHHHh
Confidence            77899999999999999999999998754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.82  E-value=2.6e-21  Score=149.68  Aligned_cols=137  Identities=19%  Similarity=0.139  Sum_probs=99.5

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhh--CCCCCCcccHhHHHHHHHHHhCCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIST--GRVSKELDVFSFRVVALEIATGRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~~Dv~s~G~vl~el~~g~~   83 (231)
                      .|||+||+|||+|..|.+||+|||.+-.+..+.  ......|...|||||.+..  ..|+.++|+||+|++++|+.+|..
T Consensus       190 IHRDvKPSNILldr~G~vKLCDFGIcGqLv~Si--AkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~f  267 (361)
T KOG1006|consen  190 IHRDVKPSNILLDRHGDVKLCDFGICGQLVDSI--AKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNF  267 (361)
T ss_pred             hhccCChhheEEecCCCEeeecccchHhHHHHH--HhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCC
Confidence            499999999999999999999999987664321  1234578889999999853  358999999999999999999999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcc-cHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRF-DEQQM  162 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~  162 (231)
                      |+....                                         .+.+.+.++.....      |.+..+. .....
T Consensus       268 Pyr~w~-----------------------------------------svfeql~~Vv~gdp------p~l~~~~~~~~~s  300 (361)
T KOG1006|consen  268 PYRKWD-----------------------------------------SVFEQLCQVVIGDP------PILLFDKECVHYS  300 (361)
T ss_pred             CcchHH-----------------------------------------HHHHHHHHHHcCCC------CeecCcccccccC
Confidence            996433                                         22222222221111      1111111 12345


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHh
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLN  191 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~  191 (231)
                      ..+..++..|+..|-.+||+..+|..+.-
T Consensus       301 ~~~~~fintCl~Kd~~~Rpky~~Lk~~~f  329 (361)
T KOG1006|consen  301 FSMVRFINTCLIKDRSDRPKYDDLKKFPF  329 (361)
T ss_pred             HHHHHHHHHHhhcccccCcchhhhhcCch
Confidence            56788899999999999999999987653

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.82  E-value=1.9e-20  Score=153.75  Aligned_cols=136  Identities=24%  Similarity=0.138  Sum_probs=96.1

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCc-eeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPK-TIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~   83 (231)
                      .||||||+||+++.++.+||+|||.+.......... .....++..|+|||.+.+..++.++|+||+|++++++++ |..
T Consensus       162 ~H~dlkp~Nill~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~  241 (307)
T cd05098         162 IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGS  241 (307)
T ss_pred             ccccccHHheEEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCC
Confidence            499999999999999999999999987653211111 111223457999999988888999999999999999998 788


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||......                                          .......          .......+.....
T Consensus       242 p~~~~~~~------------------------------------------~~~~~~~----------~~~~~~~~~~~~~  269 (307)
T cd05098         242 PYPGVPVE------------------------------------------ELFKLLK----------EGHRMDKPSNCTN  269 (307)
T ss_pred             CCCcCCHH------------------------------------------HHHHHHH----------cCCCCCCCCcCCH
Confidence            87543211                                          0110000          0000111122235


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhcc
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNFE  193 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~~  193 (231)
                      .+.+++.+||+.+|++|||+.+|+++|+..
T Consensus       270 ~~~~li~~~l~~~p~~Rps~~evl~~l~~~  299 (307)
T cd05098         270 ELYMMMRDCWHAVPSQRPTFKQLVEDLDRI  299 (307)
T ss_pred             HHHHHHHHHcccChhhCcCHHHHHHHHHHH
Confidence            677889999999999999999999999763

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.82  E-value=1.6e-20  Score=157.72  Aligned_cols=84  Identities=24%  Similarity=0.199  Sum_probs=69.6

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCC----------------------------------CceeEeeccccc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELG----------------------------------PKTIMLVGTLAY   51 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~----------------------------------~~~~~~~g~~~y   51 (231)
                      .||||||+|||++.++.+||+|||+++.......                                  ......+|+..|
T Consensus       123 vHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y  202 (363)
T cd05628         123 IHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDY  202 (363)
T ss_pred             EecCCCHHHeEECCCCCEEEeeccCcccccccccccccccccccccccccccccccccccchhhhccccccccccCCccc
Confidence            5999999999999999999999999875432100                                  001235789999


Q ss_pred             cchhhhhhCCCCCCcccHhHHHHHHHHHhCCCccccch
Q 045790           52 MASEYISTGRVSKELDVFSFRVVALEIATGRKVINRYK   89 (231)
Q Consensus        52 ~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~~~~~   89 (231)
                      +|||++.+..++.++|+||+||++++|++|+.||....
T Consensus       203 ~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~~~  240 (363)
T cd05628         203 IAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSET  240 (363)
T ss_pred             cCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCCCC
Confidence            99999988889999999999999999999999997544

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.82  E-value=2.4e-20  Score=155.03  Aligned_cols=169  Identities=16%  Similarity=0.082  Sum_probs=102.8

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCC--ceeEeeccccccchhhhhh-CCCCCCcccHhHHHHHHHHHhCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGP--KTIMLVGTLAYMASEYIST-GRVSKELDVFSFRVVALEIATGR   82 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~el~~g~   82 (231)
                      .||||||+||+++.++.+||+|||++.........  ......|+..|+|||.+.+ ..++.++|+||+|++++++++|+
T Consensus       128 vH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~  207 (336)
T cd07849         128 LHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNR  207 (336)
T ss_pred             eccCCCHHHEEECCCCCEEECcccceeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence            59999999999999999999999998765432111  1123467889999998755 45788999999999999999999


Q ss_pred             CccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           83 KVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        83 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      .||...........+.........+.....               .......+..... .......  ...    .....
T Consensus       208 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~-~~~~~~~--~~~----~~~~~  265 (336)
T cd07849         208 PLFPGKDYLHQLNLILGVLGTPSQEDLNCI---------------ISLRARNYIKSLP-FKPKVPW--NKL----FPNAD  265 (336)
T ss_pred             CCCCCCCHHHHHHHHHHHcCCCCHHHHHHh---------------hchhhhhHHhhcC-cCCcccH--HHH----hcccC
Confidence            999754432211111111110000000000               0000000000000 0000000  000    00113


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                      ..+.+++.+||+.+|++|||+.++++|+++....
T Consensus       266 ~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~  299 (336)
T cd07849         266 PKALDLLDKMLTFNPHKRITVEEALAHPYLEQYH  299 (336)
T ss_pred             cHHHHHHHHHcCCChhhCcCHHHHhcCccccccC
Confidence            4578999999999999999999999999987654

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.82  E-value=1.5e-20  Score=161.67  Aligned_cols=133  Identities=16%  Similarity=0.102  Sum_probs=106.1

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCcee--EeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTI--MLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GR   82 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~--~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~   82 (231)
                      .||||..+|+|+.....+||+|||+.+.++.+......  ...-.+.|+|||.++...|+.++|||+||+++|||++ |.
T Consensus       234 vHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGE  313 (1039)
T KOG0199|consen  234 VHRDLAARNLLLASPRTVKICDFGLMRALGENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGE  313 (1039)
T ss_pred             hhhhhhhhhheecccceeeeecccceeccCCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCC
Confidence            49999999999998889999999999998865543321  2234568999999999999999999999999999997 78


Q ss_pred             CccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           83 KVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        83 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      .|+.+....+++                                                    ..+|.+-+-..+..|.
T Consensus       314 ePW~G~~g~qIL----------------------------------------------------~~iD~~erLpRPk~cs  341 (1039)
T KOG0199|consen  314 EPWVGCRGIQIL----------------------------------------------------KNIDAGERLPRPKYCS  341 (1039)
T ss_pred             CCCCCCCHHHHH----------------------------------------------------HhccccccCCCCCCCh
Confidence            898776543222                                                    2233333334556788


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHH
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVL  190 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l  190 (231)
                      +++..+|++||..+|.+|||+..|.+.+
T Consensus       342 edIY~imk~cWah~paDRptFsair~~~  369 (1039)
T KOG0199|consen  342 EDIYQIMKNCWAHNPADRPTFSAIREDL  369 (1039)
T ss_pred             HHHHHHHHHhccCCccccccHHHHHHhH
Confidence            8999999999999999999999997544

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.82  E-value=1.4e-20  Score=152.43  Aligned_cols=80  Identities=24%  Similarity=0.201  Sum_probs=64.9

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCC-CCCCcccHhHHHHHHHHHhCCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGR-VSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~-~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      .||||||+||+++.++.++|+|||++........ ......++..|+|||.+.+.. ++.++||||+|+++++|++|..|
T Consensus       121 ~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p  199 (284)
T cd07839         121 LHRDLKPQNLLINKNGELKLADFGLARAFGIPVR-CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRP  199 (284)
T ss_pred             ecCCCCHHHEEEcCCCcEEECccchhhccCCCCC-CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCC
Confidence            5999999999999999999999999876543211 112345678899999986644 68899999999999999999887


Q ss_pred             cc
Q 045790           85 IN   86 (231)
Q Consensus        85 ~~   86 (231)
                      +.
T Consensus       200 ~~  201 (284)
T cd07839         200 LF  201 (284)
T ss_pred             Cc
Confidence            64

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.82  E-value=3.5e-20  Score=153.96  Aligned_cols=169  Identities=14%  Similarity=0.056  Sum_probs=105.7

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCc---eeEeeccccccchhhhhh-CCCCCCcccHhHHHHHHHHHhC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPK---TIMLVGTLAYMASEYIST-GRVSKELDVFSFRVVALEIATG   81 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~---~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~el~~g   81 (231)
                      +||||||+||+++.++.+||+|||++..........   .....++..|++||.+.. ..++.++|+||+|++++++++|
T Consensus       129 vH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g  208 (334)
T cd07855         129 IHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGR  208 (334)
T ss_pred             ecCCCCHHHEEEcCCCcEEecccccceeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcC
Confidence            699999999999999999999999987654321111   123467889999999865 3578999999999999999999


Q ss_pred             CCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHH
Q 045790           82 RKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQ  161 (231)
Q Consensus        82 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  161 (231)
                      +.||...........+..............                ..   ...+.+........  ..... .......
T Consensus       209 ~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~----------------~~---~~~~~~~~~~~~~~--~~~~~-~~~~~~~  266 (334)
T cd07855         209 RQLFPGKNYVHQLKLILSVLGSPSEEVLNR----------------IG---SDRVRKYIQNLPRK--QPVPW-SKIFPKA  266 (334)
T ss_pred             CCccCCCChHHHHHHHHHHhCCChhHhhhh----------------hc---hhhHHHHHhhcccC--CCCCH-HHHcccC
Confidence            999976554322222222111111100000                00   00011100000000  00000 0000112


Q ss_pred             HHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          162 MTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       162 ~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                      ...+..++.+||+.+|++|||+.++++|+++....
T Consensus       267 ~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~~  301 (334)
T cd07855         267 SPEALDLLSQMLQFDPEERITVEQALQHPFLAQYH  301 (334)
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHHhChhhhhcc
Confidence            45678999999999999999999999999996544

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.82  E-value=2.7e-20  Score=148.77  Aligned_cols=133  Identities=24%  Similarity=0.212  Sum_probs=99.5

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .|+||||+||+++.++.+||+|||++........ ......++..|++||.+....++.++|+|++|++++++++|..||
T Consensus       132 ~h~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~-~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~  210 (265)
T cd08217         132 LHRDLKPANIFLDANNNVKLGDFGLAKILGHDSS-FAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPF  210 (265)
T ss_pred             eecCCCHHHEEEecCCCEEEecccccccccCCcc-cccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcc
Confidence            4999999999999999999999999877653221 123346788999999998878889999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      .......                                       +....   .          .......+......+
T Consensus       211 ~~~~~~~---------------------------------------~~~~~---~----------~~~~~~~~~~~~~~~  238 (265)
T cd08217         211 TARNQLQ---------------------------------------LASKI---K----------EGKFRRIPYRYSSEL  238 (265)
T ss_pred             cCcCHHH---------------------------------------HHHHH---h----------cCCCCCCccccCHHH
Confidence            7543210                                       11100   0          000011222334567


Q ss_pred             HHHHHhhcCCCCCCCCCHHHHHHHHh
Q 045790          166 LIVGLWCAHPDRCFRPSIRQAIQVLN  191 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps~~ell~~l~  191 (231)
                      .+++.+|++.+|++||++.+|++|+.
T Consensus       239 ~~l~~~~l~~~p~~Rp~~~~il~~~~  264 (265)
T cd08217         239 NEVIKSMLNVDPDKRPSTEELLQLPL  264 (265)
T ss_pred             HHHHHHHccCCcccCCCHHHHhhCCC
Confidence            88999999999999999999999863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.82  E-value=2.8e-20  Score=152.45  Aligned_cols=137  Identities=20%  Similarity=0.192  Sum_probs=97.1

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCC-ceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGP-KTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~   83 (231)
                      .||||||+||+++.++.+||+|||+++........ ......++..|++||.+.+..++.++||||+|+++|++++ |..
T Consensus       131 vH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~  210 (303)
T cd05110         131 VHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGK  210 (303)
T ss_pred             eccccccceeeecCCCceEEccccccccccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCC
Confidence            59999999999999999999999999765432111 1112234568999999988888999999999999999997 888


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||......                                       ....++.    ...       ..  ........
T Consensus       211 p~~~~~~~---------------------------------------~~~~~~~----~~~-------~~--~~~~~~~~  238 (303)
T cd05110         211 PYDGIPTR---------------------------------------EIPDLLE----KGE-------RL--PQPPICTI  238 (303)
T ss_pred             CCCCCCHH---------------------------------------HHHHHHH----CCC-------CC--CCCCCCCH
Confidence            88643211                                       1111110    000       00  00011223


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      .+..++..||..+|++||++.+|++.+....
T Consensus       239 ~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~  269 (303)
T cd05110         239 DVYMVMVKCWMIDADSRPKFKELAAEFSRMA  269 (303)
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            5678899999999999999999999988643

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.82  E-value=4.4e-20  Score=150.73  Aligned_cols=141  Identities=18%  Similarity=0.170  Sum_probs=95.0

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCc-eeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh--CC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPK-TIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT--GR   82 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~--g~   82 (231)
                      .||||||+||+++.++.++|+|||++..+....... .....++..|++||......++.++|+||+|+++|++++  |.
T Consensus       152 ~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~  231 (296)
T cd05095         152 VHRDLATRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKE  231 (296)
T ss_pred             ecccCChheEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCC
Confidence            499999999999999999999999987653321111 112233567999999877889999999999999999998  66


Q ss_pred             CccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           83 KVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        83 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      .||......                                       .+.....+........ ...+     .+..+.
T Consensus       232 ~p~~~~~~~---------------------------------------~~~~~~~~~~~~~~~~-~~~~-----~~~~~~  266 (296)
T cd05095         232 QPYSQLSDE---------------------------------------QVIENTGEFFRDQGRQ-VYLP-----KPALCP  266 (296)
T ss_pred             CCccccChH---------------------------------------HHHHHHHHHHhhcccc-ccCC-----CCCCCC
Confidence            777543211                                       0000000000000000 0000     011123


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHh
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLN  191 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~  191 (231)
                      ..+.+++.+||+.||++||++.+|++.|.
T Consensus       267 ~~~~~li~~cl~~~p~~Rp~~~~i~~~l~  295 (296)
T cd05095         267 DSLYKLMLSCWRRNAKERPSFQEIHATLL  295 (296)
T ss_pred             HHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence            56788999999999999999999999885

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.82  E-value=2.6e-20  Score=154.61  Aligned_cols=84  Identities=23%  Similarity=0.260  Sum_probs=68.5

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhh-----CCCCCCcccHhHHHHHHHHHh
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIST-----GRVSKELDVFSFRVVALEIAT   80 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-----~~~~~~~Dv~s~G~vl~el~~   80 (231)
                      .||||||+|||++.++.+||+|||++...............|+..|+|||++..     ..++.++||||+||++|+|++
T Consensus       124 iHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~  203 (332)
T cd05623         124 VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLY  203 (332)
T ss_pred             EecCCCHHHEEECCCCCEEEeecchheecccCCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhc
Confidence            599999999999999999999999986543222222234578999999999862     357889999999999999999


Q ss_pred             CCCccccch
Q 045790           81 GRKVINRYK   89 (231)
Q Consensus        81 g~~p~~~~~   89 (231)
                      |+.||....
T Consensus       204 g~~Pf~~~~  212 (332)
T cd05623         204 GETPFYAES  212 (332)
T ss_pred             CCCCCCCCC
Confidence            999997543

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.82  E-value=8.3e-20  Score=150.03  Aligned_cols=172  Identities=16%  Similarity=0.115  Sum_probs=105.4

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCc
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      -.||||||.||+++.++.++|+|||++......   ......++..|++||.+.+..++.++|+||+|++++++++|..|
T Consensus       121 i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~---~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p  197 (308)
T cd06615         121 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYP  197 (308)
T ss_pred             EEECCCChHHEEEecCCcEEEccCCCccccccc---ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCC
Confidence            359999999999999999999999998654321   12335678899999998777788999999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |...........+.............      ...........................      .+.+...   .....
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~---~~~~~  262 (308)
T cd06615         198 IPPPDAKELEAMFGRPVSEGEAKESH------RPVSGHPPDSPRPMAIFELLDYIVNEP------PPKLPSG---AFSDE  262 (308)
T ss_pred             CCCcchhhHHHhhcCccccccccCCc------ccccCCCCCccchhhHHHHHHHHhcCC------CccCcCc---ccCHH
Confidence            97554332221111110000000000      000000000000111111111111111      1111110   12334


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      +.+++.+||+.+|++|||+.+|++|+++..
T Consensus       263 ~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~  292 (308)
T cd06615         263 FQDFVDKCLKKNPKERADLKELTKHPFIKR  292 (308)
T ss_pred             HHHHHHHHccCChhhCcCHHHHhcChhhhh
Confidence            778999999999999999999999999854

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.82  E-value=3.3e-20  Score=150.78  Aligned_cols=134  Identities=21%  Similarity=0.178  Sum_probs=94.9

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCc-eeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPK-TIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~   83 (231)
                      .||||||+||+++.++.++|+|||++.......... ......+..|+|||.+.+..++.++|+||+|++++++++ |..
T Consensus       152 ~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~  231 (288)
T cd05050         152 VHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQ  231 (288)
T ss_pred             ecccccHhheEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCC
Confidence            599999999999999999999999987653221111 112233557999999988889999999999999999997 777


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||......+                                          ...... .....         ..+.....
T Consensus       232 p~~~~~~~~------------------------------------------~~~~~~-~~~~~---------~~~~~~~~  259 (288)
T cd05050         232 PYYGMAHEE------------------------------------------VIYYVR-DGNVL---------SCPDNCPL  259 (288)
T ss_pred             CCCCCCHHH------------------------------------------HHHHHh-cCCCC---------CCCCCCCH
Confidence            875433211                                          111110 01000         00111234


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHh
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLN  191 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~  191 (231)
                      .+.+++.+||+.+|++|||+.||++.|+
T Consensus       260 ~l~~li~~~l~~~p~~Rpt~~el~~~l~  287 (288)
T cd05050         260 ELYNLMRLCWSKLPSDRPSFASINRILQ  287 (288)
T ss_pred             HHHHHHHHHcccCcccCCCHHHHHHHhh
Confidence            5788999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.82  E-value=4.3e-20  Score=150.44  Aligned_cols=142  Identities=15%  Similarity=0.119  Sum_probs=98.8

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhh-----hCCCCCCcccHhHHHHHHHHHh
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIS-----TGRVSKELDVFSFRVVALEIAT   80 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~Dv~s~G~vl~el~~   80 (231)
                      .||||||+||+++.++.++|+|||++....... .......++..|++||++.     ...++.++|+||+|+++|++++
T Consensus       132 ~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~  210 (292)
T cd06644         132 IHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTL-QRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQ  210 (292)
T ss_pred             eecCCCcceEEEcCCCCEEEccCccceeccccc-cccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhc
Confidence            599999999999999999999999886543221 1123456788999999874     2346778999999999999999


Q ss_pred             CCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHH
Q 045790           81 GRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQ  160 (231)
Q Consensus        81 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  160 (231)
                      |..||........                                          ..+.....      .+..  ..+..
T Consensus       211 g~~p~~~~~~~~~------------------------------------------~~~~~~~~------~~~~--~~~~~  240 (292)
T cd06644         211 IEPPHHELNPMRV------------------------------------------LLKIAKSE------PPTL--SQPSK  240 (292)
T ss_pred             CCCCCccccHHHH------------------------------------------HHHHhcCC------CccC--CCCcc
Confidence            9999864332100                                          00000000      0000  00112


Q ss_pred             HHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCCCC
Q 045790          161 QMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTMPN  198 (231)
Q Consensus       161 ~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~~~  198 (231)
                      ....+.+++.+||+.+|++||++.++++|+++......
T Consensus       241 ~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~  278 (292)
T cd06644         241 WSMEFRDFLKTALDKHPETRPSAAQLLEHPFVSSVTSN  278 (292)
T ss_pred             cCHHHHHHHHHHhcCCcccCcCHHHHhcCccccccccc
Confidence            23356788999999999999999999999987554433

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.82  E-value=2.9e-20  Score=151.21  Aligned_cols=137  Identities=17%  Similarity=0.196  Sum_probs=97.2

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCc-eeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPK-TIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~   83 (231)
                      .||||||+||+++.++.++|+|||+++......... .....++..|++||.+.+..++.++|+||+|++++++++ |..
T Consensus       141 ~H~dikp~nili~~~~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~  220 (288)
T cd05061         141 VHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQ  220 (288)
T ss_pred             cCCCCChheEEEcCCCcEEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCC
Confidence            599999999999999999999999987543221111 111234567999999988888999999999999999998 777


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||......+..                                       ..   ......          ...+.....
T Consensus       221 p~~~~~~~~~~---------------------------------------~~---~~~~~~----------~~~~~~~~~  248 (288)
T cd05061         221 PYQGLSNEQVL---------------------------------------KF---VMDGGY----------LDQPDNCPE  248 (288)
T ss_pred             CCCCCCHHHHH---------------------------------------HH---HHcCCC----------CCCCCCCCH
Confidence            88543321111                                       10   000000          001111235


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      .+.+++.+||+.+|++|||+.++++.+....
T Consensus       249 ~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~  279 (288)
T cd05061         249 RVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL  279 (288)
T ss_pred             HHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence            6788999999999999999999999988653

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.82  E-value=4.2e-20  Score=151.70  Aligned_cols=167  Identities=13%  Similarity=0.047  Sum_probs=104.7

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhC-CCCCCcccHhHHHHHHHHHhCCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTG-RVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      .||||||+||+++.++.+||+|||++........ ......++..|+|||.+.+. .++.++|+||+|+++|++++|..|
T Consensus       130 ~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~  208 (309)
T cd07845         130 IHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAK-PMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPL  208 (309)
T ss_pred             ecCCCCHHHEEECCCCCEEECccceeeecCCccC-CCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCC
Confidence            5999999999999999999999999877653221 11223446789999998653 478899999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |...........+...........+............     ..             ............     ......
T Consensus       209 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-------------~~~~~~~~~~~~-----~~~~~~  265 (309)
T cd07845         209 LPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKF-----TL-------------PKQPYNNLKHKF-----PWLSEA  265 (309)
T ss_pred             CCCCCHHHHHHHHHHhcCCCChhhchhhhcccccccc-----cc-------------cCCCCCchHHhc-----cccCHH
Confidence            9876554444433322211111110000000000000     00             000000000000     001334


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                      +.+++.+|++.||++|||+.++++|.++....
T Consensus       266 ~~~li~~ml~~dp~~R~t~~~il~h~~f~~~~  297 (309)
T cd07845         266 GLRLLNFLLMYDPKKRATAEEALESSYFKEKP  297 (309)
T ss_pred             HHHHHHHHhcCChhhCcCHHHHhcChhhccCC
Confidence            57899999999999999999999999997544

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.81  E-value=4.2e-20  Score=153.04  Aligned_cols=181  Identities=14%  Similarity=0.088  Sum_probs=100.1

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCC------ceeEeeccccccchhhhhh--CCCCCCcccHhHHHHHHH
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGP------KTIMLVGTLAYMASEYIST--GRVSKELDVFSFRVVALE   77 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~------~~~~~~g~~~y~aPE~~~~--~~~~~~~Dv~s~G~vl~e   77 (231)
                      .||||||+||+++.++.++++||+...........      ......++..|+|||++.+  ..++.++||||+||++++
T Consensus       123 iH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~e  202 (327)
T cd08227         123 VHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACE  202 (327)
T ss_pred             ecCCCChhhEEEecCCcEEEcccchhhccccccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHH
Confidence            59999999999999999999999865433211100      0112245667999999865  358899999999999999


Q ss_pred             HHhCCCccccchhhhhhhhcccc-CCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCc
Q 045790           78 IATGRKVINRYKAQKLRTQFVVP-HPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSR  156 (231)
Q Consensus        78 l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  156 (231)
                      +++|+.||............... .+.... .   ......+.............+..+.  ..  ..............
T Consensus       203 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~  274 (327)
T cd08227         203 LANGHVPFKDMPATQMLLEKLNGTVPCLLD-T---TTIPAEELTMKPSRSGANSGLGEST--TV--STPRPSNGESSSHP  274 (327)
T ss_pred             HHHCCCCCCCcchhHHHHHHhcCCcccccc-c---cchhhhhcccCCcccCCcCCCCccc--cc--CCcCccccCCcccc
Confidence            99999999764432222111111 000000 0   0000000000000000000000000  00  00000000000011


Q ss_pred             ccHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          157 FDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       157 ~~~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      ........+.+++.+||+.||++|||+.+|++|+++..
T Consensus       275 ~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~  312 (327)
T cd08227         275 YNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQ  312 (327)
T ss_pred             cccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhh
Confidence            12223446788999999999999999999999999865

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.81  E-value=6.9e-20  Score=150.35  Aligned_cols=135  Identities=20%  Similarity=0.148  Sum_probs=98.6

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhh---hCCCCCCcccHhHHHHHHHHHhCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIS---TGRVSKELDVFSFRVVALEIATGR   82 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~s~G~vl~el~~g~   82 (231)
                      .||||+|+||+++.++.++|+|||++......     ....++..|++||++.   ...++.++||||+|+++|++++|+
T Consensus       137 ~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~  211 (307)
T cd06607         137 IHRDIKAGNILLTEPGTVKLADFGSASLVSPA-----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERK  211 (307)
T ss_pred             eecCCCcccEEECCCCCEEEeecCcceecCCC-----CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCC
Confidence            59999999999999999999999998765322     2245677899999874   345788999999999999999999


Q ss_pred             CccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           83 KVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        83 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      .||...........+.                                          ...      .+.+   ......
T Consensus       212 ~p~~~~~~~~~~~~~~------------------------------------------~~~------~~~~---~~~~~~  240 (307)
T cd06607         212 PPLFNMNAMSALYHIA------------------------------------------QND------SPTL---SSNDWS  240 (307)
T ss_pred             CCCCCccHHHHHHHHh------------------------------------------cCC------CCCC---CchhhC
Confidence            9986543221000000                                          000      0000   011123


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                      ..+..++.+||+.+|++||++.+|+.|+++....
T Consensus       241 ~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~  274 (307)
T cd06607         241 DYFRNFVDSCLQKIPQDRPSSEELLKHRFVLRER  274 (307)
T ss_pred             HHHHHHHHHHhcCChhhCcCHHHHhcChhhcccC
Confidence            4578899999999999999999999999987654

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.81  E-value=4.2e-20  Score=149.66  Aligned_cols=83  Identities=23%  Similarity=0.187  Sum_probs=68.0

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhh-CCCCCCcccHhHHHHHHHHHhCCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIST-GRVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      +||||||.||+++.++.++|+|||++........ ......++..|++||.+.+ ..++.++|+||+|++++++++|..|
T Consensus       122 ~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p  200 (286)
T cd07847         122 IHRDVKPENILITKQGQIKLCDFGFARILTGPGD-DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPL  200 (286)
T ss_pred             eecCCChhhEEEcCCCcEEECccccceecCCCcc-cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCC
Confidence            6999999999999999999999999876643221 1223456778999999866 4478899999999999999999999


Q ss_pred             cccch
Q 045790           85 INRYK   89 (231)
Q Consensus        85 ~~~~~   89 (231)
                      |....
T Consensus       201 ~~~~~  205 (286)
T cd07847         201 WPGKS  205 (286)
T ss_pred             CCCCC
Confidence            97644

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.81  E-value=3.8e-20  Score=151.02  Aligned_cols=141  Identities=16%  Similarity=0.159  Sum_probs=95.1

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCc-eeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh--CC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPK-TIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT--GR   82 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~--g~   82 (231)
                      .||||||+||+++.++.+||+|||++.......... .....++..|+|||.+....++.++|+||||++++++++  +.
T Consensus       151 ~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~  230 (295)
T cd05097         151 VHRDLATRNCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKE  230 (295)
T ss_pred             eccccChhhEEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCC
Confidence            399999999999999999999999987653321111 122234568999999888889999999999999999988  55


Q ss_pred             CccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           83 KVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        83 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      .||......                                       .+.....+........      .....+....
T Consensus       231 ~p~~~~~~~---------------------------------------~~~~~~~~~~~~~~~~------~~~~~~~~~~  265 (295)
T cd05097         231 QPYSLLSDE---------------------------------------QVIENTGEFFRNQGRQ------IYLSQTPLCP  265 (295)
T ss_pred             CCCcccChH---------------------------------------HHHHHHHHhhhhcccc------ccCCCCCCCC
Confidence            677543321                                       1111111100000000      0000011122


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHh
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLN  191 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~  191 (231)
                      ..+.+++.+||+.+|++|||+.+|++.|.
T Consensus       266 ~~l~~li~~~l~~~p~~RPs~~~i~~~l~  294 (295)
T cd05097         266 SPVFKLMMRCWSRDIKDRPTFNKIHHFLR  294 (295)
T ss_pred             HHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence            46889999999999999999999999885

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.81  E-value=2.9e-20  Score=151.31  Aligned_cols=136  Identities=20%  Similarity=0.138  Sum_probs=96.0

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCC-----CCCCcccHhHHHHHHHHHh
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGR-----VSKELDVFSFRVVALEIAT   80 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~-----~~~~~Dv~s~G~vl~el~~   80 (231)
                      +||||||+||+++.++.+||+|||++........ ......++..|++||.+....     ++.++|+||+|++++++++
T Consensus       150 vH~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~  228 (291)
T cd06639         150 IHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRL-RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGD  228 (291)
T ss_pred             eccCCCHHHEEEcCCCCEEEeecccchhcccccc-cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhh
Confidence            6999999999999999999999999876543211 112345778899999975432     5789999999999999999


Q ss_pred             CCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHH
Q 045790           81 GRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQ  160 (231)
Q Consensus        81 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  160 (231)
                      |+.||...........+                                          .. ...     +.+  .....
T Consensus       229 g~~p~~~~~~~~~~~~~------------------------------------------~~-~~~-----~~~--~~~~~  258 (291)
T cd06639         229 GDPPLFDMHPVKTLFKI------------------------------------------PR-NPP-----PTL--LHPEK  258 (291)
T ss_pred             CCCCCCCCcHHHHHHHH------------------------------------------hc-CCC-----CCC--Ccccc
Confidence            99999654321000000                                          00 000     000  00111


Q ss_pred             HHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          161 QMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       161 ~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      ....+..++.+||+.+|++||++.++++|+++
T Consensus       259 ~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~  290 (291)
T cd06639         259 WCRSFNHFISQCLIKDFEARPSVTHLLEHPFI  290 (291)
T ss_pred             cCHHHHHHHHHHhhcChhhCcCHHHHhcCccc
Confidence            22357889999999999999999999999875

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.81  E-value=1.2e-20  Score=158.42  Aligned_cols=85  Identities=25%  Similarity=0.209  Sum_probs=69.4

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCC-------------------------------------ceeEeec
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGP-------------------------------------KTIMLVG   47 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~-------------------------------------~~~~~~g   47 (231)
                      ..||||||+|||++.++.++|+|||++..+......                                     .....+|
T Consensus       122 ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  201 (364)
T cd05599         122 YIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVG  201 (364)
T ss_pred             eEeccCCHHHeEECCCCCEEEeecccceeccccccccccccccccccccccccccccccccccccchhhccccccccccc
Confidence            359999999999999999999999998654321100                                     0112468


Q ss_pred             cccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCccccch
Q 045790           48 TLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVINRYK   89 (231)
Q Consensus        48 ~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~~~~~   89 (231)
                      |+.|+|||++....++.++||||+||++++|++|..||....
T Consensus       202 t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf~~~~  243 (364)
T cd05599         202 TPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFCSDN  243 (364)
T ss_pred             CccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCCCCCCC
Confidence            999999999988889999999999999999999999997544

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.81  E-value=1.8e-20  Score=151.85  Aligned_cols=165  Identities=18%  Similarity=0.079  Sum_probs=102.1

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhC-CCCCCcccHhHHHHHHHHHhCCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTG-RVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      .|+||||+||+++.++.++++|||++...............++..|+|||.+... .++.++||||+|++++++++|..+
T Consensus       121 ~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~  200 (286)
T cd07832         121 MHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPL  200 (286)
T ss_pred             ecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcC
Confidence            5999999999999999999999999876643322122345678899999988654 368899999999999999999888


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |...........+.........           ..+...      ..+..|............ +. ..    .......
T Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~------~~~~~~~~~~~~~~~~~~-~~-~~----~~~~~~~  257 (286)
T cd07832         201 FPGENDIEQLAIVFRTLGTPNE-----------ETWPGL------TSLPDYNKITFPESKPIP-LE-EI----FPDASPE  257 (286)
T ss_pred             cCCCCHHHHHHHHHHHcCCCCh-----------HHHhhc------cCcchhhcccCCCCCcch-HH-Hh----CCCccHH
Confidence            8654433222222111110000           000000      000011000000000000 00 00    0112256


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhcc
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNFE  193 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~~  193 (231)
                      +.+++.+|++.+|++|||++++++|+++.
T Consensus       258 ~~~li~~~l~~~p~~R~~~~~~l~h~~~~  286 (286)
T cd07832         258 ALDLLKGLLVYDPSKRLSAAEALRHPYFT  286 (286)
T ss_pred             HHHHHHHHhccChhhCCCHHHHhhCcCcC
Confidence            78899999999999999999999998863

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.81  E-value=8.3e-20  Score=149.33  Aligned_cols=140  Identities=19%  Similarity=0.188  Sum_probs=100.7

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .|||||+.||+++.++.++|+|||++....... .......++..|+|||++.+..++.++|+||+|++++++++|+.||
T Consensus       139 vH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~  217 (297)
T cd06659         139 IHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV-PKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPY  217 (297)
T ss_pred             ecCCCCHHHeEEccCCcEEEeechhHhhccccc-ccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence            599999999999999999999999987554322 1223456788999999998878899999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      ...........+.                                          . ..     .+....  .......+
T Consensus       218 ~~~~~~~~~~~~~------------------------------------------~-~~-----~~~~~~--~~~~~~~l  247 (297)
T cd06659         218 FSDSPVQAMKRLR------------------------------------------D-SP-----PPKLKN--AHKISPVL  247 (297)
T ss_pred             CCCCHHHHHHHHh------------------------------------------c-cC-----CCCccc--cCCCCHHH
Confidence            6433211111000                                          0 00     000000  00112346


Q ss_pred             HHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          166 LIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                      .+++.+||+.+|++||++.+|++|.++....
T Consensus       248 ~~~i~~~l~~~P~~Rps~~~ll~~~~~~~~~  278 (297)
T cd06659         248 RDFLERMLTREPQERATAQELLDHPFLLQTG  278 (297)
T ss_pred             HHHHHHHhcCCcccCcCHHHHhhChhhccCC
Confidence            7789999999999999999999998875543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.81  E-value=3.1e-20  Score=152.21  Aligned_cols=133  Identities=22%  Similarity=0.141  Sum_probs=93.5

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~p   84 (231)
                      .||||||+||+++.++.+||+|||++......  .......++..|++||++.+..++.++||||+|++++++++ |..|
T Consensus       146 ~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p  223 (303)
T cd05088         146 IHRDLAARNILVGENYVAKIADFGLSRGQEVY--VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP  223 (303)
T ss_pred             cccccchheEEecCCCcEEeCccccCcccchh--hhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCC
Confidence            49999999999999999999999998643211  11111223457999999877778899999999999999998 9999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |......+                                          ......          .......+......
T Consensus       224 ~~~~~~~~------------------------------------------~~~~~~----------~~~~~~~~~~~~~~  251 (303)
T cd05088         224 YCGMTCAE------------------------------------------LYEKLP----------QGYRLEKPLNCDDE  251 (303)
T ss_pred             cccCChHH------------------------------------------HHHHHh----------cCCcCCCCCCCCHH
Confidence            86433211                                          000000          00000001111234


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      +.+++.+||+.+|++||++.++++++..
T Consensus       252 ~~~li~~~l~~~p~~Rp~~~~il~~l~~  279 (303)
T cd05088         252 VYDLMRQCWREKPYERPSFAQILVSLNR  279 (303)
T ss_pred             HHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence            6789999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.81  E-value=2.8e-20  Score=148.42  Aligned_cols=132  Identities=18%  Similarity=0.136  Sum_probs=96.2

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCc
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      .+|+||||+||+++.++.++++|||.+....... .......++..|+|||.+.+..++.++|+||+|++++++++|..|
T Consensus       121 i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~-~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p  199 (255)
T cd08219         121 VLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPG-AYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHP  199 (255)
T ss_pred             cccCCCCcceEEECCCCcEEEcccCcceeecccc-cccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCC
Confidence            4699999999999999999999999987654321 112335678889999999888889999999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |.......                                          ....... ...     .    ..+......
T Consensus       200 ~~~~~~~~------------------------------------------~~~~~~~-~~~-----~----~~~~~~~~~  227 (255)
T cd08219         200 FQANSWKN------------------------------------------LILKVCQ-GSY-----K----PLPSHYSYE  227 (255)
T ss_pred             CCCCCHHH------------------------------------------HHHHHhc-CCC-----C----CCCcccCHH
Confidence            97543211                                          1111110 000     0    011112234


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHH
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQV  189 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~  189 (231)
                      +.+++.+||+.||++|||+.+|+..
T Consensus       228 ~~~li~~~l~~~P~~Rp~~~~il~~  252 (255)
T cd08219         228 LRSLIKQMFKRNPRSRPSATTILSR  252 (255)
T ss_pred             HHHHHHHHHhCCcccCCCHHHHhhc
Confidence            6788999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.81  E-value=1.1e-20  Score=160.78  Aligned_cols=134  Identities=21%  Similarity=0.175  Sum_probs=106.4

Q ss_pred             ecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCCcc
Q 045790            7 SRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRKVI   85 (231)
Q Consensus         7 ~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~p~   85 (231)
                      ||||..+|||+.+.-.+||+|||+++.+............-.+-||+||.+...+|+.++|||-||+-+||++. |..||
T Consensus       514 HRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPf  593 (974)
T KOG4257|consen  514 HRDIAARNILVSSPQCVKLADFGLSRYLEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPF  593 (974)
T ss_pred             hhhhhhhheeecCcceeeecccchhhhccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCcc
Confidence            99999999999999999999999999988766555554555678999999999999999999999999999875 99999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      .+....                                                    +..-.+..+-+...++.|...+
T Consensus       594 qgvkNs----------------------------------------------------DVI~~iEnGeRlP~P~nCPp~L  621 (974)
T KOG4257|consen  594 QGVKNS----------------------------------------------------DVIGHIENGERLPCPPNCPPAL  621 (974)
T ss_pred             cccccc----------------------------------------------------ceEEEecCCCCCCCCCCCChHH
Confidence            764321                                                    1111112222234455666778


Q ss_pred             HHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          166 LIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      ..||.+||.+||.+||.+.++...|..
T Consensus       622 YslmskcWayeP~kRPrftei~~~lsd  648 (974)
T KOG4257|consen  622 YSLMSKCWAYEPSKRPRFTEIKAILSD  648 (974)
T ss_pred             HHHHHHHhccCcccCCcHHHHHHHHHH
Confidence            899999999999999999998876654

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.81  E-value=7.8e-20  Score=146.93  Aligned_cols=134  Identities=23%  Similarity=0.200  Sum_probs=95.2

Q ss_pred             eecCCCCCCeeeCCCC-----cEEEeccccccccCCCCCC-ceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHH
Q 045790            6 YSRSPELPPGRGDFNF-----NAKLGDFGLARLMDHELGP-KTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIA   79 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~-----~~kl~Dfg~~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~   79 (231)
                      .|+||||+||+++.+.     .++++|||++......... ......++..|++||++.+..++.++||||+|+++++++
T Consensus       128 ~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ell  207 (269)
T cd05044         128 IHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEIL  207 (269)
T ss_pred             ccCCCChheEEEecCCCCCCcceEECCcccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHH
Confidence            5999999999999877     8999999998755322111 111223456899999998888999999999999999999


Q ss_pred             h-CCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCccc
Q 045790           80 T-GRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFD  158 (231)
Q Consensus        80 ~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  158 (231)
                      + |..||......+                                       ....+.             ........
T Consensus       208 t~g~~p~~~~~~~~---------------------------------------~~~~~~-------------~~~~~~~~  235 (269)
T cd05044         208 TLGQQPYPALNNQE---------------------------------------VLQHVT-------------AGGRLQKP  235 (269)
T ss_pred             HcCCCCCcccCHHH---------------------------------------HHHHHh-------------cCCccCCc
Confidence            8 999986433211                                       111000             00000111


Q ss_pred             HHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHh
Q 045790          159 EQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLN  191 (231)
Q Consensus       159 ~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~  191 (231)
                      ......+.+++.+||+.+|.+||++.++++.|.
T Consensus       236 ~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~  268 (269)
T cd05044         236 ENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ  268 (269)
T ss_pred             ccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence            122345678999999999999999999999885

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.81  E-value=2.3e-20  Score=152.53  Aligned_cols=144  Identities=19%  Similarity=0.180  Sum_probs=102.2

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+||+++.++.++|+|||++........ ......++..|++||.+.+..++.++|+||+|++++++++|+.||
T Consensus       137 ~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf  215 (297)
T cd06656         137 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPY  215 (297)
T ss_pred             ccCCCCHHHEEECCCCCEEECcCccceEccCCcc-CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence            5999999999999999999999999876543221 122345778899999998877889999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      ...........+..                                           ..     .+..  ..+......+
T Consensus       216 ~~~~~~~~~~~~~~-------------------------------------------~~-----~~~~--~~~~~~~~~~  245 (297)
T cd06656         216 LNENPLRALYLIAT-------------------------------------------NG-----TPEL--QNPERLSAVF  245 (297)
T ss_pred             CCCCcchheeeecc-------------------------------------------CC-----CCCC--CCccccCHHH
Confidence            64331100000000                                           00     0000  0011112345


Q ss_pred             HHHHHhhcCCCCCCCCCHHHHHHHHhcccCCCCCC
Q 045790          166 LIVGLWCAHPDRCFRPSIRQAIQVLNFETTMPNLP  200 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~~~~~  200 (231)
                      .+++.+||+.+|++||++.++++|.++....+...
T Consensus       246 ~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~~~  280 (297)
T cd06656         246 RDFLNRCLEMDVDRRGSAKELLQHPFLKLAKPLSS  280 (297)
T ss_pred             HHHHHHHccCChhhCcCHHHHhcCchhcccccccc
Confidence            67889999999999999999999999877655443

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.81  E-value=4.2e-20  Score=150.12  Aligned_cols=141  Identities=19%  Similarity=0.169  Sum_probs=101.8

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+||+++.++.++++|||.+....... .......|+..|++||.+.+..++.++|+||+|++++++++|+.||
T Consensus       137 ~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~  215 (285)
T cd06648         137 IHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEV-PRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPY  215 (285)
T ss_pred             ecCCCChhhEEEcCCCcEEEcccccchhhccCC-cccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCC
Confidence            499999999999999999999999876543221 1223346788999999998778899999999999999999999998


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      ......                                          .........      ..+....  .......+
T Consensus       216 ~~~~~~------------------------------------------~~~~~~~~~------~~~~~~~--~~~~~~~l  245 (285)
T cd06648         216 FNEPPL------------------------------------------QAMKRIRDN------LPPKLKN--LHKVSPRL  245 (285)
T ss_pred             cCCCHH------------------------------------------HHHHHHHhc------CCCCCcc--cccCCHHH
Confidence            643211                                          011111100      0001100  00122457


Q ss_pred             HHHHHhhcCCCCCCCCCHHHHHHHHhcccCCC
Q 045790          166 LIVGLWCAHPDRCFRPSIRQAIQVLNFETTMP  197 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~~  197 (231)
                      .+++.+||+.+|++||++.++++|.++....+
T Consensus       246 ~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~  277 (285)
T cd06648         246 RSFLDRMLVRDPAQRATAAELLNHPFLAKAGP  277 (285)
T ss_pred             HHHHHHHcccChhhCcCHHHHccCcccccCCC
Confidence            88999999999999999999999998866553

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.81  E-value=4.8e-20  Score=148.02  Aligned_cols=137  Identities=23%  Similarity=0.208  Sum_probs=98.7

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .|+||||+||+++.++.++++|||++....... .......++..|++||.+....++.++|+||+|+++|++++|..||
T Consensus       128 ~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~  206 (267)
T cd08229         128 MHRDIKPANVFITATGVVKLGDLGLGRFFSSKT-TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPF  206 (267)
T ss_pred             ecCCCCHHHEEEcCCCCEEECcchhhhccccCC-cccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCc
Confidence            599999999999999999999999987654322 1123456788999999998878889999999999999999999998


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      ......                                        ...+....      .....+..   ........+
T Consensus       207 ~~~~~~----------------------------------------~~~~~~~~------~~~~~~~~---~~~~~~~~~  237 (267)
T cd08229         207 YGDKMN----------------------------------------LYSLCKKI------EQCDYPPL---PSDHYSEEL  237 (267)
T ss_pred             ccccch----------------------------------------HHHHhhhh------hcCCCCCC---CcccccHHH
Confidence            643210                                        01111000      00000111   011233457


Q ss_pred             HHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          166 LIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      .+++.+||+.+|++|||+.+|++.+..
T Consensus       238 ~~li~~~l~~~p~~Rpt~~~i~~~~~~  264 (267)
T cd08229         238 RQLVNMCINPDPEKRPDITYVYDVAKR  264 (267)
T ss_pred             HHHHHHhcCCCcccCCCHHHHHHHHhh
Confidence            788999999999999999999988764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.81  E-value=4.1e-20  Score=147.61  Aligned_cols=131  Identities=23%  Similarity=0.201  Sum_probs=95.7

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~p   84 (231)
                      .||||||+||+++.++.++|+|||.++.......    ....+..|++||.+....++.++|+||+|++++++++ |..|
T Consensus       124 ~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~----~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p  199 (256)
T cd05039         124 VHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQD----SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP  199 (256)
T ss_pred             cchhcccceEEEeCCCCEEEcccccccccccccc----cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCC
Confidence            4999999999999999999999999876532211    2234557999999987788899999999999999997 8988


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |.......                                       +...+..             ......+......
T Consensus       200 ~~~~~~~~---------------------------------------~~~~~~~-------------~~~~~~~~~~~~~  227 (256)
T cd05039         200 YPRIPLKD---------------------------------------VVPHVEK-------------GYRMEAPEGCPPE  227 (256)
T ss_pred             CCCCCHHH---------------------------------------HHHHHhc-------------CCCCCCccCCCHH
Confidence            86433211                                       1111100             0000111122356


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      +.+++.+||+.+|++|||+.+|++.|..
T Consensus       228 ~~~li~~~l~~~p~~Rp~~~~l~~~l~~  255 (256)
T cd05039         228 VYKVMKDCWELDPAKRPTFKQLREQLAL  255 (256)
T ss_pred             HHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence            7889999999999999999999999864

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.81  E-value=2.8e-20  Score=152.06  Aligned_cols=141  Identities=20%  Similarity=0.205  Sum_probs=101.2

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+||+++.++.++|+|||++........ ......++..|++||.+.+..++.++|+||+|+++|++++|+.||
T Consensus       137 ~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf  215 (296)
T cd06655         137 IHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQS-KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPY  215 (296)
T ss_pred             ccCCCCHHHEEECCCCCEEEccCccchhcccccc-cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence            4999999999999999999999999876543221 122345778899999998778899999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      .......                                      .. .....   .. .     +.+  ..+......+
T Consensus       216 ~~~~~~~--------------------------------------~~-~~~~~---~~-~-----~~~--~~~~~~~~~~  245 (296)
T cd06655         216 LNENPLR--------------------------------------AL-YLIAT---NG-T-----PEL--QNPEKLSPIF  245 (296)
T ss_pred             CCCCHHH--------------------------------------HH-HHHHh---cC-C-----ccc--CCcccCCHHH
Confidence            6533210                                      00 00000   00 0     000  0011122346


Q ss_pred             HHHHHhhcCCCCCCCCCHHHHHHHHhcccCCC
Q 045790          166 LIVGLWCAHPDRCFRPSIRQAIQVLNFETTMP  197 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~~  197 (231)
                      .+++.+||+.||++|||+.+++.|.++....+
T Consensus       246 ~~li~~~l~~dp~~Rpt~~~il~~~~~~~~~~  277 (296)
T cd06655         246 RDFLNRCLEMDVEKRGSAKELLQHPFLKLAKP  277 (296)
T ss_pred             HHHHHHHhhcChhhCCCHHHHhhChHhhhccc
Confidence            77899999999999999999999999976554

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.81  E-value=9.2e-20  Score=140.27  Aligned_cols=175  Identities=15%  Similarity=-0.013  Sum_probs=115.0

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCC---ceeEeeccccccchhhhhhC-CCCCCcccHhHHHHHHHHHhC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGP---KTIMLVGTLAYMASEYISTG-RVSKELDVFSFRVVALEIATG   81 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~---~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~el~~g   81 (231)
                      .|||+|+.|+||+.++.+||+|||+++.+......   .....+.|.+|++||.+.+. .+..+.|+|..||++.||+++
T Consensus       146 lHRDmKaaNvLIt~dgilklADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtr  225 (376)
T KOG0669|consen  146 LHRDMKAANVLITKDGILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTR  225 (376)
T ss_pred             HhhcccHhhEEEcCCceEEeeccccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHcc
Confidence            39999999999999999999999999766432211   12344568899999999875 589999999999999999999


Q ss_pred             CCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHH
Q 045790           82 RKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQ  161 (231)
Q Consensus        82 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  161 (231)
                      .+.+++....+.+..|.......+++.+......+--.  ..........-.         .++.....+-..       
T Consensus       226 spimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~--sie~ePl~~~~~---------rkv~n~~kp~~k-------  287 (376)
T KOG0669|consen  226 SPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQ--SIELEPLPKGQK---------RKVKNRLKPYVK-------  287 (376)
T ss_pred             CccccCChHHHHHHHHHHHhccCCcccCCCcccchHHH--hccCCCCCcchh---------hhhhhhcccccC-------
Confidence            99999887777777666555544444432211100000  000000000000         011111111111       


Q ss_pred             HHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCCCC
Q 045790          162 MTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTMPN  198 (231)
Q Consensus       162 ~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~~~  198 (231)
                      ....++|+...+..||.+|+.+.++++|-+|....-+
T Consensus       288 d~~a~dLle~ll~~DP~kR~~ad~alnh~~F~kdp~p  324 (376)
T KOG0669|consen  288 DDEALDLLEKLLKLDPTKRIDADQALNHDFFWKDPMP  324 (376)
T ss_pred             ChhHHHHHHHHhccCcccCcchHhhhchhhhhcCCcc
Confidence            1234567777888999999999999999999776543

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.81  E-value=3.2e-20  Score=150.10  Aligned_cols=157  Identities=15%  Similarity=0.033  Sum_probs=99.2

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhh-CCCCCCcccHhHHHHHHHHHhCCC
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIST-GRVSKELDVFSFRVVALEIATGRK   83 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~el~~g~~   83 (231)
                      ..||||||+||+++. +.+||+|||++........  .....++..|++||.+.. ..++.++|+||+||+++++++|..
T Consensus       121 i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~  197 (282)
T cd07831         121 IFHRDIKPENILIKD-DILKLADFGSCRGIYSKPP--YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFP  197 (282)
T ss_pred             ceecccCHHHEEEcC-CCeEEEecccccccccCCC--cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCc
Confidence            369999999999999 9999999999876543221  123456788999998754 446889999999999999999999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhh-hcccccC---cccH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSA-ANERLDS---RFDE  159 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~---~~~~  159 (231)
                      ||......+....+........                           ..|..... ....... .......   ....
T Consensus       198 p~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  249 (282)
T cd07831         198 LFPGTNELDQIAKIHDVLGTPD---------------------------AEVLKKFR-KSRHMNYNFPSKKGTGLRKLLP  249 (282)
T ss_pred             CCCCCCHHHHHHHHHHHcCCCC---------------------------HHHHHhhc-ccccccccCcccccccHHHHcc
Confidence            9976543221111111000000                           00000000 0000000 0000000   0001


Q ss_pred             HHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          160 QQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       160 ~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      .....+.+++.+||+.+|++||++.++++|.++
T Consensus       250 ~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~~  282 (282)
T cd07831         250 NASAEGLDLLKKLLAYDPDERITAKQALRHPYF  282 (282)
T ss_pred             cccHHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence            224678899999999999999999999999864

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.81  E-value=5.5e-20  Score=154.02  Aligned_cols=138  Identities=20%  Similarity=0.091  Sum_probs=104.7

Q ss_pred             eecCCCCCCeeeCCC----CcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhC
Q 045790            6 YSRSPELPPGRGDFN----FNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATG   81 (231)
Q Consensus         6 ~~rdlk~~nil~~~~----~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g   81 (231)
                      .||||||+|+|+...    +.+|++|||++.....  .......+|++.|+|||++.+..|+..+||||+|+++|.|+.|
T Consensus       157 vHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~--~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G  234 (382)
T KOG0032|consen  157 VHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKP--GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSG  234 (382)
T ss_pred             eeccCCHHHeeeccccCCCCcEEEeeCCCceEccC--CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhC
Confidence            499999999999633    4799999999988764  4456778999999999999888999999999999999999999


Q ss_pred             CCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHH
Q 045790           82 RKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQ  161 (231)
Q Consensus        82 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  161 (231)
                      ..||...........+......                                                 .....=...
T Consensus       235 ~~PF~~~~~~~~~~~i~~~~~~-------------------------------------------------f~~~~w~~i  265 (382)
T KOG0032|consen  235 VPPFWGETEFEIFLAILRGDFD-------------------------------------------------FTSEPWDDI  265 (382)
T ss_pred             CCCCcCCChhHHHHHHHcCCCC-------------------------------------------------CCCCCcccc
Confidence            9999876643222211111110                                                 000000112


Q ss_pred             HHHHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          162 MTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       162 ~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      .....+++..++..||.+|+|+.++++|+|...
T Consensus       266 s~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~~  298 (382)
T KOG0032|consen  266 SESAKDFIRKLLEFDPRKRLTAAQALQHPWIKS  298 (382)
T ss_pred             CHHHHHHHHHhcccCcccCCCHHHHhcCccccC
Confidence            345567888999999999999999999999654

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.81  E-value=6.7e-20  Score=148.71  Aligned_cols=149  Identities=21%  Similarity=0.182  Sum_probs=103.9

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCc
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      -.||||||+||+++.++.++|+|||++......   ......|+..|++||++.+..++.++|+||+|++++++++|..|
T Consensus       125 i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~---~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p  201 (284)
T cd06620         125 IMHRDIKPSNILVNSRGQIKLCDFGVSGELINS---IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFP  201 (284)
T ss_pred             eeccCCCHHHEEECCCCcEEEccCCcccchhhh---ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCC
Confidence            369999999999999999999999988654221   11234678899999999877889999999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |........                               .......+..+........      .+.+..   ......
T Consensus       202 ~~~~~~~~~-------------------------------~~~~~~~~~~~~~~~~~~~------~~~~~~---~~~~~~  241 (284)
T cd06620         202 FAFSNIDDD-------------------------------GQDDPMGILDLLQQIVQEP------PPRLPS---SDFPED  241 (284)
T ss_pred             Ccccchhhh-------------------------------hhhhhhHHHHHHHHHhhcc------CCCCCc---hhcCHH
Confidence            975432100                               0001111222222221111      011100   112345


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                      +.+++.+||+.||++|||+.|+++++++....
T Consensus       242 ~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~~~  273 (284)
T cd06620         242 LRDFVDACLLKDPTERPTPQQLCAMPPFIQAL  273 (284)
T ss_pred             HHHHHHHHhcCCcccCcCHHHHhcCccccccc
Confidence            77889999999999999999999999886644

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.81  E-value=2.7e-20  Score=149.56  Aligned_cols=137  Identities=17%  Similarity=0.150  Sum_probs=94.2

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhh---hCCCCCCcccHhHHHHHHHHHhCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIS---TGRVSKELDVFSFRVVALEIATGR   82 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~s~G~vl~el~~g~   82 (231)
                      +|||+||.||+++.++.++|+|||++....... .......++..|++||.+.   ...++.++|+||+|++++++++|+
T Consensus       128 ~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~  206 (267)
T cd06646         128 MHRDIKGANILLTDNGDVKLADFGVAAKITATI-AKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQ  206 (267)
T ss_pred             cccCCCHHHEEECCCCCEEECcCccceeecccc-cccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCC
Confidence            599999999999999999999999987654221 1123346778999999874   334678899999999999999999


Q ss_pred             CccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           83 KVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        83 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      .||...........+..                                           ..   ...+....  .....
T Consensus       207 ~p~~~~~~~~~~~~~~~-------------------------------------------~~---~~~~~~~~--~~~~~  238 (267)
T cd06646         207 PPMFDLHPMRALFLMSK-------------------------------------------SN---FQPPKLKD--KTKWS  238 (267)
T ss_pred             CCccccchhhhheeeec-------------------------------------------CC---CCCCCCcc--ccccC
Confidence            99864321100000000                                           00   00000000  00112


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHh
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLN  191 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~  191 (231)
                      ..+.+++.+||+.+|++|||+.+|++||+
T Consensus       239 ~~~~~li~~~l~~~P~~Rp~~~~il~~l~  267 (267)
T cd06646         239 STFHNFVKISLTKNPKKRPTAERLLTHLF  267 (267)
T ss_pred             HHHHHHHHHHhhCChhhCcCHHHHhcCCC
Confidence            45678999999999999999999999874

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.81  E-value=4e-20  Score=157.09  Aligned_cols=136  Identities=18%  Similarity=0.110  Sum_probs=96.7

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCC-CceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELG-PKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~   83 (231)
                      .|||||++|||++.++.+||+|||+++....... .......++..|++||.+....++.++|+||+|++++|+++ |..
T Consensus       261 vHrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~  340 (401)
T cd05107         261 VHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGT  340 (401)
T ss_pred             CcccCCcceEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCC
Confidence            4999999999999999999999999876432211 11122345678999999988788999999999999999998 888


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||......                                          ........         .......+.....
T Consensus       341 P~~~~~~~------------------------------------------~~~~~~~~---------~~~~~~~p~~~~~  369 (401)
T cd05107         341 PYPELPMN------------------------------------------EQFYNAIK---------RGYRMAKPAHASD  369 (401)
T ss_pred             CCCCCCch------------------------------------------HHHHHHHH---------cCCCCCCCCCCCH
Confidence            88542211                                          00000000         0000111112235


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      .+.+++.+||+.+|++||++++|++.|+.
T Consensus       370 ~l~~li~~cl~~~P~~RPs~~ell~~L~~  398 (401)
T cd05107         370 EIYEIMQKCWEEKFEIRPDFSQLVHLVGD  398 (401)
T ss_pred             HHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence            67889999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.81  E-value=1.3e-20  Score=152.04  Aligned_cols=172  Identities=18%  Similarity=0.036  Sum_probs=111.9

Q ss_pred             eecCCCCCCeeeC--------------------CCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCC
Q 045790            6 YSRSPELPPGRGD--------------------FNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKE   65 (231)
Q Consensus         6 ~~rdlk~~nil~~--------------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~   65 (231)
                      .|-||||+|||+-                    .+..++|+|||.+......    ....+.|.-|+|||++.+.+++..
T Consensus       214 ~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~----hs~iVsTRHYRAPEViLgLGwS~p  289 (415)
T KOG0671|consen  214 THTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEH----HSTIVSTRHYRAPEVILGLGWSQP  289 (415)
T ss_pred             eecCCChheEEEeccceEEEeccCCccceeccCCCcceEEEecCCcceeccC----cceeeeccccCCchheeccCcCCc
Confidence            3899999999872                    1345789999999775422    255678899999999999999999


Q ss_pred             cccHhHHHHHHHHHhCCCccccchhhhhhhhccccCCCCCCccccccc-----cccchhhccCCCCCCCchhHHHHHHHh
Q 045790           66 LDVFSFRVVALEIATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLG-----VEGEKAVLGGSSKNYCPKLVAWVWDLY  140 (231)
Q Consensus        66 ~Dv~s~G~vl~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~  140 (231)
                      +||||+||++.|+.+|...|+.....+.+.-..+-+...+..++.+..     .-+.-.|....+...            
T Consensus       290 CDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~------------  357 (415)
T KOG0671|consen  290 CDVWSIGCILVELYTGETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGK------------  357 (415)
T ss_pred             cCceeeeeEEEEeeccceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCcccccccc------------
Confidence            999999999999999999998766433222222222222222222221     111111111111110            


Q ss_pred             hcchhhhhhcccc----cCcccHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCCC
Q 045790          141 GERKLLSAANERL----DSRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTMP  197 (231)
Q Consensus       141 ~~~~~~~~~~~~l----~~~~~~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~~  197 (231)
                          ...+.++..    .......+...+.+|+.++|.+||.+|+|++|++.|+.|....+
T Consensus       358 ----~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~HpFF~~~~~  414 (415)
T KOG0671|consen  358 ----SKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALSHPFFARLTP  414 (415)
T ss_pred             ----chhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhcCHHhhcCCC
Confidence                111111110    01223456677999999999999999999999999999976543

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.81  E-value=3.8e-20  Score=154.24  Aligned_cols=166  Identities=19%  Similarity=0.129  Sum_probs=103.1

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhh-CCCCCCcccHhHHHHHHHHHhCCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIST-GRVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      .||||||+||+++.++.++|+|||+++.....    .....++..|+|||.+.+ ..++.++|+||+|++++++++|+.|
T Consensus       139 ~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~p  214 (342)
T cd07879         139 IHRDLKPGNLAVNEDCELKILDFGLARHADAE----MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTL  214 (342)
T ss_pred             ccCCCCHHHEEECCCCCEEEeeCCCCcCCCCC----CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCC
Confidence            69999999999999999999999998764321    122356778999999866 3578899999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |...........+...............               .......+...      ........+...+ ......
T Consensus       215 f~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~------~~~~~~~~~~~~~-~~~~~~  272 (342)
T cd07879         215 FKGKDYLDQLTQILKVTGVPGPEFVQKL---------------EDKAAKSYIKS------LPKYPRKDFSTLF-PKASPQ  272 (342)
T ss_pred             CCCCCHHHHHHHHHHhcCCCCHHHHHHh---------------cccchHHHHhh------cCCcccchHHHHh-cCCCHH
Confidence            9765433222222211111100000000               00000000000      0000000000000 011234


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhcccCCC
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNFETTMP  197 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~~  197 (231)
                      +.+++.+||+.||++||++.+++.|.++...-+
T Consensus       273 ~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~  305 (342)
T cd07879         273 AVDLLEKMLELDVDKRLTATEALEHPYFDSFRD  305 (342)
T ss_pred             HHHHHHHHcCCChhhCcCHHHHhcCcchhhccc
Confidence            678999999999999999999999999876543

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.81  E-value=5.8e-20  Score=147.89  Aligned_cols=135  Identities=23%  Similarity=0.193  Sum_probs=96.4

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~p   84 (231)
                      .||||||+||+++.++.++++|||+++..............++..|+|||.+....++.++|+||+|++++++++ |..|
T Consensus       129 ~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p  208 (270)
T cd05056         129 VHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKP  208 (270)
T ss_pred             eccccChheEEEecCCCeEEccCceeeecccccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCC
Confidence            599999999999999999999999987654322111112223457999999877778999999999999999886 9999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |......                                       ....+..+   ...      ..    ........
T Consensus       209 f~~~~~~---------------------------------------~~~~~~~~---~~~------~~----~~~~~~~~  236 (270)
T cd05056         209 FQGVKNN---------------------------------------DVIGRIEN---GER------LP----MPPNCPPT  236 (270)
T ss_pred             CCCCCHH---------------------------------------HHHHHHHc---CCc------CC----CCCCCCHH
Confidence            8654321                                       11111100   000      00    11122345


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      +.+++.+|+..+|++|||+.+++..|..
T Consensus       237 ~~~li~~~l~~~P~~Rpt~~~~~~~l~~  264 (270)
T cd05056         237 LYSLMTKCWAYDPSKRPRFTELKAQLSD  264 (270)
T ss_pred             HHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence            7789999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.81  E-value=2.1e-20  Score=158.05  Aligned_cols=84  Identities=24%  Similarity=0.183  Sum_probs=68.0

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCC----------------------------------------------
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELG----------------------------------------------   39 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~----------------------------------------------   39 (231)
                      .||||||+|||++.++.+||+|||++........                                              
T Consensus       123 vHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (382)
T cd05625         123 IHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQR  202 (382)
T ss_pred             ecCCCCHHHEEECCCCCEEEeECCCCccccccccccccccccccccccccccccccccccccccccccchhhhhcccccc
Confidence            5999999999999999999999999753210000                                              


Q ss_pred             CceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCccccch
Q 045790           40 PKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVINRYK   89 (231)
Q Consensus        40 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~~~~~   89 (231)
                      ......+|+..|+|||++.+..++.++||||+||++++|++|+.||....
T Consensus       203 ~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~  252 (382)
T cd05625         203 CLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLAQT  252 (382)
T ss_pred             ccccccccCcccCCHHHhcCCCCCCeeeEEechHHHHHHHhCCCCCCCCC
Confidence            00123468999999999988889999999999999999999999997543

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.81  E-value=5.6e-20  Score=149.42  Aligned_cols=139  Identities=17%  Similarity=0.088  Sum_probs=100.0

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+||+++.++.++|+|||++.......  ......|+..|+|||.+.+..++.++|+||+|++++++++|..||
T Consensus       124 iH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~--~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~  201 (285)
T cd05632         124 VYRDLKPENILLDDYGHIRISDLGLAVKIPEGE--SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPF  201 (285)
T ss_pred             eecCCCHHHEEECCCCCEEEecCCcceecCCCC--cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCC
Confidence            499999999999999999999999986653221  123346889999999998888899999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      .......                                      ........... .      ...    +.......+
T Consensus       202 ~~~~~~~--------------------------------------~~~~~~~~~~~-~------~~~----~~~~~~~~~  232 (285)
T cd05632         202 RGRKEKV--------------------------------------KREEVDRRVLE-T------EEV----YSAKFSEEA  232 (285)
T ss_pred             CCCCHHH--------------------------------------HHHHHHHhhhc-c------ccc----cCccCCHHH
Confidence            6533110                                      00011111000 0      000    111123345


Q ss_pred             HHHHHhhcCCCCCCCCC-----HHHHHHHHhcccC
Q 045790          166 LIVGLWCAHPDRCFRPS-----IRQAIQVLNFETT  195 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps-----~~ell~~l~~~~~  195 (231)
                      .+++..|++.||++||+     +.++++|.++...
T Consensus       233 ~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~  267 (285)
T cd05632         233 KSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNM  267 (285)
T ss_pred             HHHHHHHccCCHhHcCCCcccChHHHHcChhhhcC
Confidence            78899999999999999     8899999887553

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.81  E-value=8.8e-21  Score=152.11  Aligned_cols=134  Identities=25%  Similarity=0.249  Sum_probs=92.1

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCc-eeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CC
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPK-TIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GR   82 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~   82 (231)
                      ..|++|+++||+++.++.+||+|||++.......... .........|+|||.+....++.++||||||+++||+++ |+
T Consensus       124 iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~  203 (259)
T PF07714_consen  124 IIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGK  203 (259)
T ss_dssp             EEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSS
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            3699999999999999999999999987763211111 112345668999999988889999999999999999999 67


Q ss_pred             CccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           83 KVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        83 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      .||......                                          .....+.. .         .....+....
T Consensus       204 ~p~~~~~~~------------------------------------------~~~~~~~~-~---------~~~~~~~~~~  231 (259)
T PF07714_consen  204 FPFSDYDNE------------------------------------------EIIEKLKQ-G---------QRLPIPDNCP  231 (259)
T ss_dssp             GTTTTSCHH------------------------------------------HHHHHHHT-T---------EETTSBTTSB
T ss_pred             ccccccccc------------------------------------------cccccccc-c---------ccceeccchh
Confidence            888654322                                          11111111 1         1111122234


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHH
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVL  190 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l  190 (231)
                      ..+..++..||..+|++|||+.+|++.|
T Consensus       232 ~~~~~li~~C~~~~p~~RPs~~~i~~~L  259 (259)
T PF07714_consen  232 KDIYSLIQQCWSHDPEKRPSFQEILQEL  259 (259)
T ss_dssp             HHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence            4577899999999999999999999875

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.81  E-value=5.2e-20  Score=147.33  Aligned_cols=135  Identities=23%  Similarity=0.182  Sum_probs=96.2

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~p   84 (231)
                      .|+||||+||+++.++.++++|||++...............++..|++||.+.+..++.++|+||+|++++++++ |+.|
T Consensus       125 ~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p  204 (261)
T cd05034         125 IHRDLAARNILVGENLVCKIADFGLARLIEDDEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVP  204 (261)
T ss_pred             ccCCcchheEEEcCCCCEEECccccceeccchhhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCC
Confidence            499999999999999999999999987664321111122233457999999987788999999999999999998 9999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |...........+                                          ..          ......+......
T Consensus       205 ~~~~~~~~~~~~~------------------------------------------~~----------~~~~~~~~~~~~~  232 (261)
T cd05034         205 YPGMTNREVLEQV------------------------------------------ER----------GYRMPRPPNCPEE  232 (261)
T ss_pred             CCCCCHHHHHHHH------------------------------------------Hc----------CCCCCCCCCCCHH
Confidence            8643321111110                                          00          0000011111345


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      +.+++.+|++.+|++||++.++++.|+.
T Consensus       233 ~~~~i~~~l~~~p~~Rp~~~~l~~~l~~  260 (261)
T cd05034         233 LYDLMLQCWDKDPEERPTFEYLQSFLED  260 (261)
T ss_pred             HHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence            7889999999999999999999988763

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.81  E-value=6.2e-20  Score=148.73  Aligned_cols=137  Identities=17%  Similarity=0.110  Sum_probs=98.5

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhh-CCCCCCcccHhHHHHHHHHHhCCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIST-GRVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      .||||||+||+++.++.++++|||++.......   .....|+..|++||.+.. ..++.++|+||+|++++++++|..|
T Consensus       119 vH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p  195 (279)
T cd05633         119 VYRDLKPANILLDEHGHVRISDLGLACDFSKKK---PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSP  195 (279)
T ss_pred             CCCCCCHHHEEECCCCCEEEccCCcceeccccC---ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCC
Confidence            599999999999999999999999986543221   123467889999999864 4578899999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |......                                       .. ....+..      ......    .+......
T Consensus       196 f~~~~~~---------------------------------------~~-~~~~~~~------~~~~~~----~~~~~~~~  225 (279)
T cd05633         196 FRQHKTK---------------------------------------DK-HEIDRMT------LTVNVE----LPDSFSPE  225 (279)
T ss_pred             cCCCCCc---------------------------------------CH-HHHHHHh------hcCCcC----CccccCHH
Confidence            9643210                                       00 0010000      000111    11222345


Q ss_pred             HHHHHHhhcCCCCCCCC-----CHHHHHHHHhcccC
Q 045790          165 LLIVGLWCAHPDRCFRP-----SIRQAIQVLNFETT  195 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rp-----s~~ell~~l~~~~~  195 (231)
                      +..++..||+.||.+|+     |+.++++|+++...
T Consensus       226 ~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~~  261 (279)
T cd05633         226 LKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKGI  261 (279)
T ss_pred             HHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccCC
Confidence            67888999999999999     69999999998663

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.81  E-value=5.8e-20  Score=147.99  Aligned_cols=135  Identities=18%  Similarity=0.206  Sum_probs=96.8

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCC-ceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGP-KTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~   83 (231)
                      .||||||+||+++.++.+|++|||+++........ ......++..|++||.+....++.++||||+|+++|++++ |..
T Consensus       135 ~H~dikp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~  214 (273)
T cd05074         135 IHRDLAARNCMLNENMTVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQT  214 (273)
T ss_pred             eecccchhhEEEcCCCCEEECcccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCC
Confidence            59999999999999999999999998765432211 1112234567999999988888899999999999999998 888


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||......                                       .+..+...   ..        .+  ..+.....
T Consensus       215 p~~~~~~~---------------------------------------~~~~~~~~---~~--------~~--~~~~~~~~  242 (273)
T cd05074         215 PYAGVENS---------------------------------------EIYNYLIK---GN--------RL--KQPPDCLE  242 (273)
T ss_pred             CCCCCCHH---------------------------------------HHHHHHHc---CC--------cC--CCCCCCCH
Confidence            88643321                                       11111110   00        00  00112234


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      .+.+++.+||+.+|++|||+.++++.|+.
T Consensus       243 ~~~~l~~~~l~~~p~~Rps~~~~~~~l~~  271 (273)
T cd05074         243 DVYELMCQCWSPEPKCRPSFQHLRDQLEL  271 (273)
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHHHHh
Confidence            67889999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.81  E-value=5.4e-20  Score=149.22  Aligned_cols=136  Identities=18%  Similarity=0.133  Sum_probs=95.8

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhh-----CCCCCCcccHhHHHHHHHHHh
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIST-----GRVSKELDVFSFRVVALEIAT   80 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-----~~~~~~~Dv~s~G~vl~el~~   80 (231)
                      .||||||+||+++.++.++|+|||++....... .......|+..|+|||++..     ..++.++|+||+|+++|++++
T Consensus       146 ~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~  224 (286)
T cd06638         146 IHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTR-LRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGD  224 (286)
T ss_pred             cccCCCHHhEEECCCCCEEEccCCceeecccCC-CccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhc
Confidence            599999999999999999999999987654321 12233468889999998753     346889999999999999999


Q ss_pred             CCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHH
Q 045790           81 GRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQ  160 (231)
Q Consensus        81 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  160 (231)
                      |+.||............                                          . ........++.       .
T Consensus       225 g~~p~~~~~~~~~~~~~------------------------------------------~-~~~~~~~~~~~-------~  254 (286)
T cd06638         225 GDPPLADLHPMRALFKI------------------------------------------P-RNPPPTLHQPE-------L  254 (286)
T ss_pred             CCCCCCCCchhHHHhhc------------------------------------------c-ccCCCcccCCC-------C
Confidence            99998643321000000                                          0 00000000010       1


Q ss_pred             HHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          161 QMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       161 ~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      ....+..++.+||+.+|++|||+.+|++|+++
T Consensus       255 ~~~~~~~li~~~l~~~p~~Rps~~ell~~~~~  286 (286)
T cd06638         255 WSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI  286 (286)
T ss_pred             cCHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence            12357789999999999999999999999863

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.81  E-value=6.9e-20  Score=146.17  Aligned_cols=131  Identities=20%  Similarity=0.162  Sum_probs=94.5

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~p   84 (231)
                      .||||||+||+++.++.+||+|||++.......    .....+..|++||.+.+..++.++|+||+|++++++++ |..|
T Consensus       122 ~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~----~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p  197 (254)
T cd05083         122 VHRDLAARNILVSEDGVAKVSDFGLARVGSMGV----DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAP  197 (254)
T ss_pred             eccccCcceEEEcCCCcEEECCCccceeccccC----CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCC
Confidence            599999999999999999999999987543211    11223457999999887888999999999999999997 8888


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |.......                                       +....   . ..         ............
T Consensus       198 ~~~~~~~~---------------------------------------~~~~~---~-~~---------~~~~~~~~~~~~  225 (254)
T cd05083         198 YPKMSLKE---------------------------------------VKECV---E-KG---------YRMEPPEGCPAD  225 (254)
T ss_pred             CccCCHHH---------------------------------------HHHHH---h-CC---------CCCCCCCcCCHH
Confidence            86433211                                       11100   0 00         000011122345


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      +.+++.+||+.+|++||++.+|+..+..
T Consensus       226 ~~~li~~~l~~~p~~Rp~~~~l~~~l~~  253 (254)
T cd05083         226 VYVLMTSCWETEPKKRPSFHKLREKLEK  253 (254)
T ss_pred             HHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence            6789999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.81  E-value=9.4e-20  Score=149.71  Aligned_cols=135  Identities=20%  Similarity=0.171  Sum_probs=97.7

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhh---CCCCCCcccHhHHHHHHHHHhC
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIST---GRVSKELDVFSFRVVALEIATG   81 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~---~~~~~~~Dv~s~G~vl~el~~g   81 (231)
                      .+||||||+||+++.++.++|+|||++......     ....++..|+|||.+..   ..++.++||||+|++++++++|
T Consensus       136 i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g  210 (308)
T cd06634         136 MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA-----NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAER  210 (308)
T ss_pred             cccCCCCHHhEEECCCCcEEECCcccceeecCc-----ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcC
Confidence            369999999999999999999999998765321     23456788999999742   4578899999999999999999


Q ss_pred             CCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHH
Q 045790           82 RKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQ  161 (231)
Q Consensus        82 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  161 (231)
                      ..||........                                          ........      .+..   .....
T Consensus       211 ~~p~~~~~~~~~------------------------------------------~~~~~~~~------~~~~---~~~~~  239 (308)
T cd06634         211 KPPLFNMNAMSA------------------------------------------LYHIAQNE------SPAL---QSGHW  239 (308)
T ss_pred             CCCCccccHHHH------------------------------------------HHHHhhcC------CCCc---Ccccc
Confidence            999864332100                                          00000000      0000   01122


Q ss_pred             HHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccC
Q 045790          162 MTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETT  195 (231)
Q Consensus       162 ~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~  195 (231)
                      ...+..++.+||+.+|++||++.+++.|+++...
T Consensus       240 ~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~  273 (308)
T cd06634         240 SEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRE  273 (308)
T ss_pred             cHHHHHHHHHHhhCCcccCCCHHHHhhCcccccc
Confidence            3446788999999999999999999999988664

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.81  E-value=7.7e-20  Score=151.79  Aligned_cols=84  Identities=24%  Similarity=0.291  Sum_probs=69.3

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhh-----CCCCCCcccHhHHHHHHHHHh
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIST-----GRVSKELDVFSFRVVALEIAT   80 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-----~~~~~~~Dv~s~G~vl~el~~   80 (231)
                      .||||||+||+++.++.+||+|||++...............|+..|+|||++.+     ..++.++|+||+|+++|+|++
T Consensus       124 iHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~  203 (331)
T cd05624         124 VHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLY  203 (331)
T ss_pred             eeccCchHHEEEcCCCCEEEEeccceeeccCCCceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhh
Confidence            599999999999999999999999987654332222334578999999999865     457889999999999999999


Q ss_pred             CCCccccch
Q 045790           81 GRKVINRYK   89 (231)
Q Consensus        81 g~~p~~~~~   89 (231)
                      |+.||....
T Consensus       204 g~~Pf~~~~  212 (331)
T cd05624         204 GETPFYAES  212 (331)
T ss_pred             CCCCccCCC
Confidence            999996543

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.81  E-value=2.3e-20  Score=151.11  Aligned_cols=165  Identities=20%  Similarity=0.113  Sum_probs=102.9

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhh-CCCCCCcccHhHHHHHHHHHhCCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIST-GRVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      .|+||||+||+++.++.++++|||++...............++..|++||.+.+ ..++.++|||++|++++++++|+.|
T Consensus       122 ~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p  201 (287)
T cd07840         122 LHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPI  201 (287)
T ss_pred             eeccCcHHHeEEcCCCCEEEccccceeeccCCCcccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCC
Confidence            599999999999999999999999987665432212233455778999998754 3478899999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |...........+...........+...                 ..+ .+.............+...+    ...+...
T Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~-~~~~~~~~~~~~~~~~~~~~----~~~~~~~  259 (287)
T cd07840         202 FQGSTELEQLEKIFELCGSPTDENWPGV-----------------SKL-PWFENLKPKKPYKRRLREFF----KHLIDPS  259 (287)
T ss_pred             CCCCChHHHHHHHHHHhCCCchhhcccc-----------------ccc-hhhhhccccccchhHHHHHh----cccCCHH
Confidence            9776544333322211111100000000                 000 00000000000000000111    1112456


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      +.+++.+||+.+|++||++.+++.+.++
T Consensus       260 ~~~~i~~~l~~~P~~Rp~~~~~l~~~~~  287 (287)
T cd07840         260 ALDLLDKLLTLDPKKRISADQALQHEYF  287 (287)
T ss_pred             HHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence            7899999999999999999999998764

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.81  E-value=1.1e-19  Score=147.44  Aligned_cols=139  Identities=19%  Similarity=0.130  Sum_probs=98.2

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCC------CCCCcccHhHHHHHHHHH
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGR------VSKELDVFSFRVVALEIA   79 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~------~~~~~Dv~s~G~vl~el~   79 (231)
                      .||||||+||+++.++.++|+|||.+......   ......++..|++||.+.+..      ++.++|+||+|+++++++
T Consensus       125 ~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~  201 (286)
T cd06622         125 IHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS---LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMA  201 (286)
T ss_pred             eeCCCCHHHEEECCCCCEEEeecCCcccccCC---ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHH
Confidence            59999999999999999999999998765321   122345777899999985432      477899999999999999


Q ss_pred             hCCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccH
Q 045790           80 TGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDE  159 (231)
Q Consensus        80 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  159 (231)
                      +|..||......                                       .........         .. ......+.
T Consensus       202 ~g~~pf~~~~~~---------------------------------------~~~~~~~~~---------~~-~~~~~~~~  232 (286)
T cd06622         202 LGRYPYPPETYA---------------------------------------NIFAQLSAI---------VD-GDPPTLPS  232 (286)
T ss_pred             hCCCCCCCcchh---------------------------------------hHHHHHHHH---------hh-cCCCCCCc
Confidence            999999643211                                       000000000         00 00011222


Q ss_pred             HHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          160 QQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       160 ~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                      .....+..++..||+.+|++||++.++++|+++...-
T Consensus       233 ~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~~~  269 (286)
T cd06622         233 GYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKYK  269 (286)
T ss_pred             ccCHHHHHHHHHHcccCcccCCCHHHHhcChhhhhcc
Confidence            2345567889999999999999999999999875543

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.81  E-value=4.6e-20  Score=153.45  Aligned_cols=167  Identities=14%  Similarity=0.033  Sum_probs=103.1

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhh-CCCCCCcccHhHHHHHHHHHhCCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIST-GRVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      +||||||+||+++.++.+||+|||++....... .......++..|+|||.+.. ..++.++|+||+|++++++++|+.|
T Consensus       130 ~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~p  208 (337)
T cd07858         130 LHRDLKPSNLLLNANCDLKICDFGLARTTSEKG-DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPL  208 (337)
T ss_pred             ecCCCCHHHEEEcCCCCEEECcCccccccCCCc-ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCC
Confidence            599999999999999999999999987654321 11233456788999999865 4588999999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |...........+.............           .    ........++.....      ..++.... ........
T Consensus       209 f~~~~~~~~~~~~~~~~~~~~~~~~~-----------~----~~~~~~~~~~~~~~~------~~~~~~~~-~~~~~~~~  266 (337)
T cd07858         209 FPGKDYVHQLKLITELLGSPSEEDLG-----------F----IRNEKARRYIRSLPY------TPRQSFAR-LFPHANPL  266 (337)
T ss_pred             CCCCChHHHHHHHHHHhCCCChHHhh-----------h----cCchhhhHHHHhcCc------ccccCHHH-HcccCCHH
Confidence            97543221111111100000000000           0    000001111110000      00000000 00122355


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhcccC
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNFETT  195 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~  195 (231)
                      +.+++.+||+.+|++|||+.++++|.++...
T Consensus       267 ~~~li~~~l~~~P~~Rps~~ell~h~~~~~~  297 (337)
T cd07858         267 AIDLLEKMLVFDPSKRITVEEALAHPYLASL  297 (337)
T ss_pred             HHHHHHHHhcCChhhccCHHHHHcCcchhhh
Confidence            7899999999999999999999999998653

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.80  E-value=3.8e-20  Score=149.69  Aligned_cols=150  Identities=17%  Similarity=0.077  Sum_probs=98.3

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCc--eeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPK--TIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~   83 (231)
                      .||||||+||+++.++.++|+|||.+..........  .....++..|++||.+....++.++|+||+|++++++++|..
T Consensus       131 ~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~  210 (284)
T cd05038         131 IHRDLAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGD  210 (284)
T ss_pred             ecCCCCHHhEEEcCCCCEEEcccccccccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCC
Confidence            499999999999999999999999997765322111  111233456999999988888999999999999999999998


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      |+.......  ..+....                         ........+.. ...         .......+.....
T Consensus       211 p~~~~~~~~--~~~~~~~-------------------------~~~~~~~~~~~-~~~---------~~~~~~~~~~~~~  253 (284)
T cd05038         211 PSQSPPAEF--LRMIGIA-------------------------QGQMIVTRLLE-LLK---------EGERLPRPPSCPD  253 (284)
T ss_pred             Ccccccchh--ccccccc-------------------------cccccHHHHHH-HHH---------cCCcCCCCccCCH
Confidence            875432110  0000000                         00000111111 110         0001111112235


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      .+.+++.+||+.+|++||||.+|+++|..
T Consensus       254 ~~~~li~~cl~~~p~~Rpt~~ei~~~l~~  282 (284)
T cd05038         254 EVYDLMKLCWEAEPQDRPSFADLILIVDR  282 (284)
T ss_pred             HHHHHHHHHhccChhhCCCHHHHHHHHhh
Confidence            68889999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.80  E-value=9.7e-20  Score=149.77  Aligned_cols=170  Identities=16%  Similarity=0.099  Sum_probs=101.3

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCC------ceeEeeccccccchhhhhh--CCCCCCcccHhHHHHHHH
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGP------KTIMLVGTLAYMASEYIST--GRVSKELDVFSFRVVALE   77 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~------~~~~~~g~~~y~aPE~~~~--~~~~~~~Dv~s~G~vl~e   77 (231)
                      .|||||++||+++.++.+|++|||.+.........      ......++..|++||.+..  ..++.++|+||+|+++++
T Consensus       123 vH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~e  202 (314)
T cd08216         123 IHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACE  202 (314)
T ss_pred             ecCCCCcceEEEecCCceEEecCccceeeccccccccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHH
Confidence            69999999999999999999999988654321110      1123356678999999865  347889999999999999


Q ss_pred             HHhCCCccccchhhhhh-hhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCc
Q 045790           78 IATGRKVINRYKAQKLR-TQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSR  156 (231)
Q Consensus        78 l~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  156 (231)
                      +++|..||......... ..+....+.............        .....   .....     .....    ......
T Consensus       203 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~---~~~~~-----~~~~~----~~~~~~  262 (314)
T cd08216         203 LANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYED--------SMSQS---RSSNE-----HPNNR----DSVDHP  262 (314)
T ss_pred             HHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcC--------CcCcc---ccccc-----ccchh----hhhhcc
Confidence            99999999754322111 111100000000000000000        00000   00000     00000    000011


Q ss_pred             ccHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccC
Q 045790          157 FDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETT  195 (231)
Q Consensus       157 ~~~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~  195 (231)
                      ........+.+++.+||+.||++|||+.++++|+++...
T Consensus       263 ~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~~  301 (314)
T cd08216         263 YTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQC  301 (314)
T ss_pred             hhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhhh
Confidence            122234567889999999999999999999999998643

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.80  E-value=4.5e-20  Score=169.19  Aligned_cols=135  Identities=14%  Similarity=0.093  Sum_probs=88.7

Q ss_pred             eecCCCCCCeeeCC-------------------CCcEEEeccccccccCCCCC---------------CceeEeeccccc
Q 045790            6 YSRSPELPPGRGDF-------------------NFNAKLGDFGLARLMDHELG---------------PKTIMLVGTLAY   51 (231)
Q Consensus         6 ~~rdlk~~nil~~~-------------------~~~~kl~Dfg~~~~~~~~~~---------------~~~~~~~g~~~y   51 (231)
                      .||||||+|||++.                   ++.+|++|||+++.......               .......|++.|
T Consensus       102 vHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y  181 (793)
T PLN00181        102 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWY  181 (793)
T ss_pred             eeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcce
Confidence            59999999999954                   34456666666543211000               001123578889


Q ss_pred             cchhhhhhCCCCCCcccHhHHHHHHHHHhCCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCch
Q 045790           52 MASEYISTGRVSKELDVFSFRVVALEIATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPK  131 (231)
Q Consensus        52 ~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (231)
                      +|||++.+..++.++|||||||+++||++|..|+.....                                        .
T Consensus       182 ~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~----------------------------------------~  221 (793)
T PLN00181        182 TSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSR----------------------------------------T  221 (793)
T ss_pred             EChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHH----------------------------------------H
Confidence            999999888899999999999999999998887643210                                        0


Q ss_pred             hHHHHHHHhhcchhhhhhcccccCcccHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          132 LVAWVWDLYGERKLLSAANERLDSRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       132 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      +......         ...+..     .........++.+||+.+|.+||+|.||++|+++..
T Consensus       222 ~~~~~~~---------~~~~~~-----~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h~~~~~  270 (793)
T PLN00181        222 MSSLRHR---------VLPPQI-----LLNWPKEASFCLWLLHPEPSCRPSMSELLQSEFINE  270 (793)
T ss_pred             HHHHHHh---------hcChhh-----hhcCHHHHHHHHHhCCCChhhCcChHHHhhchhhhh
Confidence            0000000         000100     011223456778899999999999999999998754

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.80  E-value=3.3e-20  Score=150.34  Aligned_cols=83  Identities=25%  Similarity=0.227  Sum_probs=66.9

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCC-CCCCcccHhHHHHHHHHHhCCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGR-VSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~-~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      .||||+|+||+++.++.+||+|||++....... .......++..|++||.+.+.. ++.++|+||+|++++++++|+.|
T Consensus       122 ~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p  200 (284)
T cd07860         122 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL  200 (284)
T ss_pred             ecCCCCHHHEEECCCCCEEEeeccchhhcccCc-cccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCC
Confidence            599999999999999999999999987654321 1122335677899999876544 57889999999999999999999


Q ss_pred             cccch
Q 045790           85 INRYK   89 (231)
Q Consensus        85 ~~~~~   89 (231)
                      |....
T Consensus       201 ~~~~~  205 (284)
T cd07860         201 FPGDS  205 (284)
T ss_pred             CCCCC
Confidence            97544

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.80  E-value=1.2e-19  Score=144.59  Aligned_cols=133  Identities=22%  Similarity=0.218  Sum_probs=95.1

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~p   84 (231)
                      .||||||+||+++.++.++++|||++...............++..|++||.+....++.++|+|++|++++++++ |..|
T Consensus       125 ~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p  204 (258)
T smart00219      125 IHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESP  204 (258)
T ss_pred             eecccccceEEEccCCeEEEcccCCceecccccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCC
Confidence            599999999999999999999999987665432221112235678999999977778999999999999999998 7888


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |.......                                       +...+   .. ...         ..........
T Consensus       205 ~~~~~~~~---------------------------------------~~~~~---~~-~~~---------~~~~~~~~~~  232 (258)
T smart00219      205 YPGMSNEE---------------------------------------VLEYL---KK-GYR---------LPKPENCPPE  232 (258)
T ss_pred             CCCCCHHH---------------------------------------HHHHH---hc-CCC---------CCCCCcCCHH
Confidence            76433221                                       11111   00 000         0011113345


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHH
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVL  190 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l  190 (231)
                      +.+++.+|+..+|++|||+.++++.|
T Consensus       233 ~~~~i~~~l~~~p~~Rpt~~~ll~~l  258 (258)
T smart00219      233 IYKLMLQCWAEDPEDRPTFSELVEIL  258 (258)
T ss_pred             HHHHHHHHCcCChhhCcCHHHHHhhC
Confidence            77899999999999999999998764

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.80  E-value=5.4e-20  Score=149.88  Aligned_cols=164  Identities=18%  Similarity=0.092  Sum_probs=102.4

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCC-CCCCcccHhHHHHHHHHHhCCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGR-VSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~-~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      .||||||+||+++.++.++|+|||++....... .......++..|++||.+.+.. ++.++|+||+|++++++++|..|
T Consensus       128 ~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~-~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~  206 (293)
T cd07843         128 LHRDLKTSNLLLNNRGILKICDFGLAREYGSPL-KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPL  206 (293)
T ss_pred             eeccCCHHHEEECCCCcEEEeecCceeeccCCc-cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCC
Confidence            599999999999999999999999987665321 1123345677899999986544 68889999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHH-HHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQ-QMT  163 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~  163 (231)
                      |......+....+...........+....                 .+..+.     ...........+...++.. ...
T Consensus       207 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~  264 (293)
T cd07843         207 FPGKSEIDQLNKIFKLLGTPTEKIWPGFS-----------------ELPGAK-----KKTFTKYPYNQLRKKFPALSLSD  264 (293)
T ss_pred             CCCCChHHHHHHHHHHhCCCchHHHHHhh-----------------ccchhc-----ccccccccchhhhccccccCCCh
Confidence            97655443333332211111110000000                 000000     0000000000111111111 234


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      .+.+++..||+.+|++|||+.|+++|.+|
T Consensus       265 ~~~~li~~~l~~~p~~R~t~~ell~~~~f  293 (293)
T cd07843         265 NGFDLLNRLLTYDPAKRISAEDALKHPYF  293 (293)
T ss_pred             HHHHHHHHHhccCccccCCHHHHhcCCCC
Confidence            56789999999999999999999999765

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.80  E-value=8.1e-20  Score=152.76  Aligned_cols=146  Identities=15%  Similarity=0.108  Sum_probs=111.9

Q ss_pred             eeecCCCCCCeee-CCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCC-CCcccHhHHHHHHHHHhCC
Q 045790            5 AYSRSPELPPGRG-DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVS-KELDVFSFRVVALEIATGR   82 (231)
Q Consensus         5 ~~~rdlk~~nil~-~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~-~~~Dv~s~G~vl~el~~g~   82 (231)
                      ..||||||+||++ ..-|-+||+|||++..+.++  ....+.+|+..|-|||++.+..|+ +++||||+|+++|.++.|+
T Consensus       139 VVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG--~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq  216 (864)
T KOG4717|consen  139 VVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPG--KKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQ  216 (864)
T ss_pred             hhcccCCcceeEEeeecCceEeeeccccccCCCc--chhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCC
Confidence            3599999999865 45688999999999776543  445678999999999999998874 7799999999999999999


Q ss_pred             CccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           83 KVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        83 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      .||+.-+..                                                   +.+.-++|-.+  ..+....
T Consensus       217 ~PFqeANDS---------------------------------------------------ETLTmImDCKY--tvPshvS  243 (864)
T KOG4717|consen  217 PPFQEANDS---------------------------------------------------ETLTMIMDCKY--TVPSHVS  243 (864)
T ss_pred             Cccccccch---------------------------------------------------hhhhhhhcccc--cCchhhh
Confidence            999754311                                                   11222233332  3344556


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCCCCCCCCCCC
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTMPNLPSKMHV  205 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~~~~~~~~~~  205 (231)
                      ..+-+|+..||+.||.+|.|..+|+.+.|-...-+.+....+.
T Consensus       244 ~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~~D~~~sT~iPL  286 (864)
T KOG4717|consen  244 KECRDLIQSMLVRDPKKRASLEEIVSTSWLQAGDRGLSTAIPL  286 (864)
T ss_pred             HHHHHHHHHHHhcCchhhccHHHHhccccccCCCCCccccCce
Confidence            6778889999999999999999999999976665555554443

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.80  E-value=4.6e-20  Score=148.01  Aligned_cols=137  Identities=23%  Similarity=0.161  Sum_probs=97.2

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCC-----CCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHEL-----GPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT   80 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~-----~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~   80 (231)
                      +|+||||+||+++.++.++|+|||++.......     ........++..|++||.+.+..++.++|+||+|++++++++
T Consensus       124 ~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~  203 (265)
T cd06631         124 VHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMAT  203 (265)
T ss_pred             ccCCcCHHhEEECCCCeEEeccchhhHhhhhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHh
Confidence            599999999999999999999999987643211     011123457889999999988778899999999999999999


Q ss_pred             CCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHH
Q 045790           81 GRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQ  160 (231)
Q Consensus        81 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  160 (231)
                      |..||......                                         ........ ....    .+.+    +..
T Consensus       204 g~~p~~~~~~~-----------------------------------------~~~~~~~~-~~~~----~~~~----~~~  233 (265)
T cd06631         204 GKPPLASMDRL-----------------------------------------AAMFYIGA-HRGL----MPRL----PDS  233 (265)
T ss_pred             CCCccccCChH-----------------------------------------HHHHHhhh-ccCC----CCCC----CCC
Confidence            99999643211                                         00000000 0000    0111    112


Q ss_pred             HHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          161 QMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       161 ~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      ....+..++.+||+.+|++||++.++++|.++
T Consensus       234 ~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~  265 (265)
T cd06631         234 FSAAAIDFVTSCLTRDQHERPSALQLLRHDFL  265 (265)
T ss_pred             CCHHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence            23456788999999999999999999998764

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.80  E-value=8.2e-20  Score=147.98  Aligned_cols=159  Identities=18%  Similarity=0.087  Sum_probs=101.5

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      +|+|||++||+++.++.++|+|||++.......  ......++..|++||.+.+..++.++|+||+|+++++|++|..||
T Consensus       129 ~h~~l~~~nili~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~  206 (287)
T cd07838         129 VHRDLKPQNILVTSDGQVKIADFGLARIYSFEM--ALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLF  206 (287)
T ss_pred             eeccCChhhEEEccCCCEEEeccCcceeccCCc--ccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcc
Confidence            699999999999999999999999987654321  112334677899999998888899999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      ......+....+...........+.           .    ..  ...   ...     ......... ..........+
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~-----------~----~~--~~~---~~~-----~~~~~~~~~-~~~~~~~~~~~  260 (287)
T cd07838         207 RGTSEADQLDKIFDVIGLPSEEEWP-----------R----NV--SLP---RSS-----FPSYTPRSF-KSFVPEICEEG  260 (287)
T ss_pred             cCCChHHHHHHHHHHcCCCChHhcC-----------C----Cc--ccc---hhh-----cccccccch-hhhhhhhhHHH
Confidence            7655433222222111000000000           0    00  000   000     000000000 00111223556


Q ss_pred             HHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          166 LIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      .+++.+||+.||.+||++.++++|.++
T Consensus       261 ~~li~~~l~~dp~~Rp~~~~il~~~~~  287 (287)
T cd07838         261 LDLLKKMLTFNPHKRISAFEALQHPYF  287 (287)
T ss_pred             HHHHHHHhccCCccCCCHHHHhcCcCC
Confidence            789999999999999999999998764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.80  E-value=8.8e-20  Score=144.52  Aligned_cols=135  Identities=20%  Similarity=0.166  Sum_probs=97.6

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCc
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      -.|+||+|+||+++.++.++|+|||.+........  .....++..|++||.+....++.++|+|++|++++++++|..|
T Consensus       119 i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p  196 (253)
T cd05122         119 IIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA--RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPP  196 (253)
T ss_pred             EecCCCCHHHEEEccCCeEEEeecccccccccccc--ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCC
Confidence            35999999999999999999999999877654321  2345678899999999877788999999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |.......                                       .......    ...     +.+...  ......
T Consensus       197 ~~~~~~~~---------------------------------------~~~~~~~----~~~-----~~~~~~--~~~~~~  226 (253)
T cd05122         197 YSELPPMK---------------------------------------ALFKIAT----NGP-----PGLRNP--EKWSDE  226 (253)
T ss_pred             CCCCchHH---------------------------------------HHHHHHh----cCC-----CCcCcc--cccCHH
Confidence            86542110                                       0000000    000     000000  001345


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHh
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLN  191 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~  191 (231)
                      +.+++.+||+.||++|||+.++++|++
T Consensus       227 ~~~~i~~~l~~~p~~R~t~~~~l~~~~  253 (253)
T cd05122         227 FKDFLKKCLQKNPEKRPTAEQLLKHPF  253 (253)
T ss_pred             HHHHHHHHccCChhhCCCHHHHhcCCC
Confidence            788899999999999999999999864

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.80  E-value=1e-19  Score=151.04  Aligned_cols=84  Identities=24%  Similarity=0.237  Sum_probs=68.6

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhh-----CCCCCCcccHhHHHHHHHHHh
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIST-----GRVSKELDVFSFRVVALEIAT   80 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-----~~~~~~~Dv~s~G~vl~el~~   80 (231)
                      .||||||+|||++.++.+||+|||++...............|+..|+|||++..     ..++.++||||+||++|+|++
T Consensus       124 vH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~  203 (331)
T cd05597         124 VHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLY  203 (331)
T ss_pred             EECCCCHHHEEECCCCCEEEEECCceeecCCCCCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhh
Confidence            599999999999999999999999987654332222233568999999999863     346788999999999999999


Q ss_pred             CCCccccch
Q 045790           81 GRKVINRYK   89 (231)
Q Consensus        81 g~~p~~~~~   89 (231)
                      |+.||....
T Consensus       204 g~~Pf~~~~  212 (331)
T cd05597         204 GETPFYAES  212 (331)
T ss_pred             CCCCCCCCC
Confidence            999996543

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.80  E-value=1.9e-19  Score=148.52  Aligned_cols=138  Identities=19%  Similarity=0.162  Sum_probs=99.0

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhh---hCCCCCCcccHhHHHHHHHHHhCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIS---TGRVSKELDVFSFRVVALEIATGR   82 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~s~G~vl~el~~g~   82 (231)
                      .||||+|+||+++.++.++|+|||++......     ....++..|++||.+.   ...++.++|+||+|++++++++|+
T Consensus       147 ~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~  221 (317)
T cd06635         147 IHRDIKAGNILLTEPGQVKLADFGSASIASPA-----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERK  221 (317)
T ss_pred             ccCCCCcccEEECCCCCEEEecCCCccccCCc-----ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCC
Confidence            59999999999999999999999988654321     2345778899999974   345788999999999999999999


Q ss_pred             CccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           83 KVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        83 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      .||...........+                                          .....      +..   ......
T Consensus       222 ~p~~~~~~~~~~~~~------------------------------------------~~~~~------~~~---~~~~~~  250 (317)
T cd06635         222 PPLFNMNAMSALYHI------------------------------------------AQNES------PTL---QSNEWS  250 (317)
T ss_pred             CCCCCccHHHHHHHH------------------------------------------HhccC------CCC---CCcccc
Confidence            998643321100000                                          00000      000   011122


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCCCCC
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTMPNL  199 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~~~~  199 (231)
                      ..+.+++.+||+.+|.+||++.++++|+++....+..
T Consensus       251 ~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~~~  287 (317)
T cd06635         251 DYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRERPET  287 (317)
T ss_pred             HHHHHHHHHHccCCcccCcCHHHHHhChhhhccCccc
Confidence            3467889999999999999999999999886655443

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.80  E-value=5.1e-20  Score=149.31  Aligned_cols=151  Identities=17%  Similarity=0.111  Sum_probs=95.9

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCce--eEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKT--IMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~--~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~   83 (231)
                      +||||||+||+++.++.+||+|||++...........  ....++..|++||.+.+..++.++|+||+|+++++++++..
T Consensus       130 ~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~  209 (284)
T cd05081         130 VHRDLATRNILVESENRVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSD  209 (284)
T ss_pred             eeccCCHhhEEECCCCeEEECCCcccccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCC
Confidence            5999999999999999999999999886643222111  11123346999999988888999999999999999999876


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ++...... ........                          ...........+.....         .....+.....
T Consensus       210 ~~~~~~~~-~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~  253 (284)
T cd05081         210 KSCSPPAE-FMRMMGND--------------------------KQGQMIVYHLIELLKNN---------GRLPAPPGCPA  253 (284)
T ss_pred             cCCCcchh-hhhhcccc--------------------------cccccchHHHHHHHhcC---------CcCCCCCCCCH
Confidence            65322110 00000000                          00000111111111111         00011112234


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      .+.+++.+||+.+|++|||+.+|++.|+.
T Consensus       254 ~~~~li~~cl~~~p~~Rpt~~ei~~~l~~  282 (284)
T cd05081         254 EIYAIMKECWNNDPSQRPSFSELALQVEA  282 (284)
T ss_pred             HHHHHHHHHccCChhhCCCHHHHHHHHHh
Confidence            57889999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.80  E-value=1e-19  Score=145.52  Aligned_cols=136  Identities=18%  Similarity=0.179  Sum_probs=96.1

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhC---CCCCCcccHhHHHHHHHHHhCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTG---RVSKELDVFSFRVVALEIATGR   82 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~---~~~~~~Dv~s~G~vl~el~~g~   82 (231)
                      .|+||||+||+++.++.++|+|||.+....... .......++..|++||.+...   .++.++|+||+|+++++|++|+
T Consensus       123 ~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~-~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~  201 (262)
T cd06613         123 IHRDIKGANILLTEDGDVKLADFGVSAQLTATI-AKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQ  201 (262)
T ss_pred             eecCCChhhEEECCCCCEEECccccchhhhhhh-hccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCC
Confidence            599999999999999999999999987654221 112334677889999998766   7888999999999999999999


Q ss_pred             CccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           83 KVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        83 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      .||.......                                      .......     ...   ..+.+  .......
T Consensus       202 ~p~~~~~~~~--------------------------------------~~~~~~~-----~~~---~~~~~--~~~~~~~  233 (262)
T cd06613         202 PPMFDLHPMR--------------------------------------ALFLISK-----SNF---PPPKL--KDKEKWS  233 (262)
T ss_pred             CCCCCCCHHH--------------------------------------HHHHHHh-----ccC---CCccc--cchhhhh
Confidence            9996533110                                      0000000     000   00000  0111223


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHH
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVL  190 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l  190 (231)
                      ..+.+++.+||+.+|.+|||+.+|+.|.
T Consensus       234 ~~~~~li~~~l~~~p~~Rpt~~~il~~~  261 (262)
T cd06613         234 PVFHDFIKKCLTKDPKKRPTATKLLQHP  261 (262)
T ss_pred             HHHHHHHHHHcCCChhhCCCHHHHhcCC
Confidence            4578899999999999999999999874

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.80  E-value=5.9e-20  Score=146.59  Aligned_cols=135  Identities=16%  Similarity=0.146  Sum_probs=98.6

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCc
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      ..|+||+++||+++.++.++++|||++........ ......|+..|++||++.+..++.++|+||+|++++++++|+.|
T Consensus       122 i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~  200 (256)
T cd08218         122 ILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVE-LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHA  200 (256)
T ss_pred             EecCCCCHHHEEEcCCCCEEEeeccceeecCcchh-hhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCC
Confidence            35999999999999999999999999876543211 11234577889999999887888999999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |......                                          ..+.+.....          ....+......
T Consensus       201 ~~~~~~~------------------------------------------~~~~~~~~~~----------~~~~~~~~~~~  228 (256)
T cd08218         201 FEAGNMK------------------------------------------NLVLKIIRGS----------YPPVSSHYSYD  228 (256)
T ss_pred             ccCCCHH------------------------------------------HHHHHHhcCC----------CCCCcccCCHH
Confidence            8643321                                          1111111000          00011122345


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      +.+++.+||+.+|++||++.+|++|.++
T Consensus       229 ~~~li~~~l~~~p~~Rp~~~~vl~~~~~  256 (256)
T cd08218         229 LRNLVSQLFKRNPRDRPSVNSILEKNFI  256 (256)
T ss_pred             HHHHHHHHhhCChhhCcCHHHHhhCcCC
Confidence            7889999999999999999999998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.80  E-value=1.3e-19  Score=150.18  Aligned_cols=184  Identities=14%  Similarity=0.079  Sum_probs=103.9

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCc------eeEeeccccccchhhhhhC--CCCCCcccHhHHHHHHH
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPK------TIMLVGTLAYMASEYISTG--RVSKELDVFSFRVVALE   77 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~------~~~~~g~~~y~aPE~~~~~--~~~~~~Dv~s~G~vl~e   77 (231)
                      .||||||+||+++.++.++++||+.+..........      .....++..|++||++.+.  .++.++|+||+||++++
T Consensus       123 vHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~e  202 (328)
T cd08226         123 IHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACE  202 (328)
T ss_pred             ecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHH
Confidence            599999999999999999999997543221111100      0112245579999998653  47889999999999999


Q ss_pred             HHhCCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcc
Q 045790           78 IATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRF  157 (231)
Q Consensus        78 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  157 (231)
                      +++|+.||................+..+..... .. .....+....... ...+   .................+....
T Consensus       203 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~  276 (328)
T cd08226         203 LATGRVPFQDMLRTQMLLQKLKGPPYSPLDITT-FP-CEESRMKNSQSGV-DSGI---GESVVAAGMTQTMTSERLRTPS  276 (328)
T ss_pred             HHhCCCCCCCcChHHHHHHHhcCCCCCCccccc-cc-hhhhhhccchhhh-hccc---ccchhccccccccccccccchh
Confidence            999999997765433322222211111110000 00 0000000000000 0000   0000000000011112222222


Q ss_pred             cHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccC
Q 045790          158 DEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETT  195 (231)
Q Consensus       158 ~~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~  195 (231)
                      .......+.+++.+||+.||++|||+.++++|.++...
T Consensus       277 ~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~  314 (328)
T cd08226         277 SKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQV  314 (328)
T ss_pred             hhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHH
Confidence            33455678899999999999999999999999998553

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.80  E-value=8.7e-20  Score=146.73  Aligned_cols=136  Identities=23%  Similarity=0.241  Sum_probs=94.6

Q ss_pred             eecCCCCCCeeeCC-CCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCC--CCCCcccHhHHHHHHHHHhCC
Q 045790            6 YSRSPELPPGRGDF-NFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGR--VSKELDVFSFRVVALEIATGR   82 (231)
Q Consensus         6 ~~rdlk~~nil~~~-~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~--~~~~~Dv~s~G~vl~el~~g~   82 (231)
                      .||||||+||+++. ++.++|+|||++....... .......++..|++||++....  ++.++|+||+|++++++++|.
T Consensus       130 ~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~-~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~  208 (268)
T cd06624         130 VHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGIN-PCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGK  208 (268)
T ss_pred             eecCCCHHHEEEcCCCCeEEEecchhheecccCC-CccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCC
Confidence            59999999999986 6789999999987553221 1122345788999999986543  788999999999999999999


Q ss_pred             CccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           83 KVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        83 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      .||......                                       ....+.....   .    ..+    ..+....
T Consensus       209 ~p~~~~~~~---------------------------------------~~~~~~~~~~---~----~~~----~~~~~~~  238 (268)
T cd06624         209 PPFIELGEP---------------------------------------QAAMFKVGMF---K----IHP----EIPESLS  238 (268)
T ss_pred             CCCccccCh---------------------------------------hhhHhhhhhh---c----cCC----CCCcccC
Confidence            998642210                                       0000000000   0    001    1111223


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      ..+..++.+||+.+|++|||+.++++|+++
T Consensus       239 ~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~  268 (268)
T cd06624         239 AEAKNFILRCFEPDPDKRASAHDLLQDPFL  268 (268)
T ss_pred             HHHHHHHHHHcCCCchhCCCHHHHHhCCCC
Confidence            456788999999999999999999999864

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.80  E-value=1.5e-19  Score=146.17  Aligned_cols=164  Identities=18%  Similarity=0.092  Sum_probs=102.5

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhC-CCCCCcccHhHHHHHHHHHhCCC
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTG-RVSKELDVFSFRVVALEIATGRK   83 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~el~~g~~   83 (231)
                      -.|+||||+||+++.++.++|+|||.+....... .......++..|++||.+.+. .++.++|+||+|++++++++|+.
T Consensus       119 i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~-~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~  197 (283)
T cd05118         119 ILHRDLKPENLLINTEGVLKLADFGLARSFGSPV-RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRP  197 (283)
T ss_pred             eeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc-ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCC
Confidence            3599999999999999999999999987665432 112234567789999998766 67899999999999999999999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||......+....+..........                    ....+..+......  .......... .........
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~  254 (283)
T cd05118         198 LFPGKSEIDQLFKIFRTLGTPDPE--------------------VWPKFTSLARNYKF--SFPKKAGMPL-PKLFPNASP  254 (283)
T ss_pred             CCCCCCHHHHHHHHHHHcCCCchH--------------------hcccchhhhhhhhh--hhccccccCH-HHhhhhhCH
Confidence            996544322222111111000000                    00000010000000  0000000000 001112345


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      .+.+++..||+.||.+||++.+++.|+++
T Consensus       255 ~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~  283 (283)
T cd05118         255 QALDLLSQMLHYDPHKRITAEQALAHPYF  283 (283)
T ss_pred             HHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence            67899999999999999999999999864

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.80  E-value=1.2e-19  Score=145.93  Aligned_cols=135  Identities=20%  Similarity=0.231  Sum_probs=95.8

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCcee--EeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTI--MLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GR   82 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~--~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~   82 (231)
                      .||||||+||+++.++.++++|||++............  ...++..|++||.+.+..++.++|+||+|++++++++ |.
T Consensus       128 ~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~  207 (267)
T cd05066         128 VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGE  207 (267)
T ss_pred             eehhhchhcEEECCCCeEEeCCCCcccccccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCC
Confidence            49999999999999999999999999876432211111  1122457999999988888999999999999999886 99


Q ss_pred             CccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           83 KVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        83 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      .||......+                                       +...+.+    .         ..........
T Consensus       208 ~p~~~~~~~~---------------------------------------~~~~~~~----~---------~~~~~~~~~~  235 (267)
T cd05066         208 RPYWEMSNQD---------------------------------------VIKAIEE----G---------YRLPAPMDCP  235 (267)
T ss_pred             CCcccCCHHH---------------------------------------HHHHHhC----C---------CcCCCCCCCC
Confidence            9986543221                                       1111100    0         0000011123


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      ..+.+++.+|++.+|++||++.++++.|..
T Consensus       236 ~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  265 (267)
T cd05066         236 AALHQLMLDCWQKDRNERPKFEQIVSILDK  265 (267)
T ss_pred             HHHHHHHHHHcccCchhCCCHHHHHHHHHh
Confidence            456789999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=99.80  E-value=5.3e-20  Score=149.98  Aligned_cols=136  Identities=18%  Similarity=0.158  Sum_probs=104.4

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCC-CCCcccHhHHHHHHHHHhCCC
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRV-SKELDVFSFRVVALEIATGRK   83 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~s~G~vl~el~~g~~   83 (231)
                      ..|||||..|||+|.|+.+||+|||++..+...  ....+++|++.|.+||++.+.+| .+.+|.||+|+++|.++.|..
T Consensus       174 VvHRDLKLENILLD~N~NiKIADFGLSNly~~~--kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtM  251 (668)
T KOG0611|consen  174 VVHRDLKLENILLDQNNNIKIADFGLSNLYADK--KFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTM  251 (668)
T ss_pred             ceecccchhheeecCCCCeeeeccchhhhhccc--cHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhccc
Confidence            469999999999999999999999999876532  33567899999999999988887 567999999999999999999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||++.+......+|.+                                                   -.+++   ++...
T Consensus       252 PFDG~Dhk~lvrQIs~---------------------------------------------------GaYrE---P~~PS  277 (668)
T KOG0611|consen  252 PFDGRDHKRLVRQISR---------------------------------------------------GAYRE---PETPS  277 (668)
T ss_pred             ccCCchHHHHHHHhhc---------------------------------------------------ccccC---CCCCc
Confidence            9998775533222211                                                   00111   01111


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                      ....|++++|.-+|++|.|+.+|..|-|-+-..
T Consensus       278 dA~gLIRwmLmVNP~RRATieDiAsHWWvNwgy  310 (668)
T KOG0611|consen  278 DASGLIRWMLMVNPERRATIEDIASHWWVNWGY  310 (668)
T ss_pred             hHHHHHHHHHhcCcccchhHHHHhhhheeeccc
Confidence            224577788888999999999999998865443

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=99.80  E-value=7.9e-20  Score=150.49  Aligned_cols=83  Identities=23%  Similarity=0.195  Sum_probs=72.9

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCc
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      -.-||+||.|||+|.+|+++|+|+|++..+..+..  ....+||.+|||||++....|+..+|.|++||++|+|+.|..|
T Consensus       308 iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~~--~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sP  385 (591)
T KOG0986|consen  308 IVYRDLKPENILLDDHGHVRISDLGLAVEIPEGKP--IRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSP  385 (591)
T ss_pred             eeeccCChhheeeccCCCeEeeccceEEecCCCCc--cccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCc
Confidence            34599999999999999999999999988765432  3345899999999999988899999999999999999999999


Q ss_pred             cccch
Q 045790           85 INRYK   89 (231)
Q Consensus        85 ~~~~~   89 (231)
                      |..+.
T Consensus       386 Fr~~K  390 (591)
T KOG0986|consen  386 FRQRK  390 (591)
T ss_pred             hhhhh
Confidence            97655

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.80  E-value=2.2e-19  Score=146.51  Aligned_cols=165  Identities=17%  Similarity=0.018  Sum_probs=101.4

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhh-CCCCCCcccHhHHHHHHHHHhCCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIST-GRVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      .|+||||+||+++.++.++|+|||++........ ......++..|+|||.+.+ ..++.++|+||+|++++++++|..+
T Consensus       124 ~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~  202 (298)
T cd07841         124 LHRDLKPNNLLIASDGVLKLADFGLARSFGSPNR-KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPF  202 (298)
T ss_pred             eecCCChhhEEEcCCCCEEEccceeeeeccCCCc-cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCcc
Confidence            5999999999999999999999999876643211 1222345678999999855 3468899999999999999999888


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |...........+...........+           ...      .....+...       .......... ........
T Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~------~~~~~~~~~-------~~~~~~~~~~-~~~~~~~~  257 (298)
T cd07841         203 LPGDSDIDQLGKIFEALGTPTEENW-----------PGV------TSLPDYVEF-------KPFPPTPLKQ-IFPAASDD  257 (298)
T ss_pred             ccCCccHHHHHHHHHHcCCCchhhh-----------hhc------ccccccccc-------cccCCcchhh-hcccccHH
Confidence            7654432222211111000000000           000      000000000       0000000000 00112346


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                      +.+++.+||+.+|++|||+.+|++|.++....
T Consensus       258 ~~~li~~~l~~~P~~R~s~~e~l~~~~~~~~~  289 (298)
T cd07841         258 ALDLLQRLLTLNPNKRITARQALEHPYFSNDP  289 (298)
T ss_pred             HHHHHHHHhcCCcccCcCHHHHhhCccccCCC
Confidence            78899999999999999999999999986644

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.80  E-value=6.6e-20  Score=150.21  Aligned_cols=86  Identities=21%  Similarity=0.172  Sum_probs=68.3

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCC---ceeEeeccccccchhhhhhCC-CCCCcccHhHHHHHHHHHh
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGP---KTIMLVGTLAYMASEYISTGR-VSKELDVFSFRVVALEIAT   80 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~---~~~~~~g~~~y~aPE~~~~~~-~~~~~Dv~s~G~vl~el~~   80 (231)
                      -.||||||+||+++.++.+||+|||++.........   ......++..|+|||.+.+.. ++.++|+||+|++++++++
T Consensus       140 i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t  219 (310)
T cd07865         140 ILHRDMKAANILITKDGILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWT  219 (310)
T ss_pred             eeccCCCHHHEEECCCCcEEECcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHh
Confidence            359999999999999999999999998765432111   112345677899999886543 6788999999999999999


Q ss_pred             CCCccccchh
Q 045790           81 GRKVINRYKA   90 (231)
Q Consensus        81 g~~p~~~~~~   90 (231)
                      |..||.....
T Consensus       220 ~~~~~~~~~~  229 (310)
T cd07865         220 RSPIMQGNTE  229 (310)
T ss_pred             CCCCCCCCCH
Confidence            9999976543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.80  E-value=3.1e-19  Score=143.68  Aligned_cols=84  Identities=21%  Similarity=0.196  Sum_probs=64.4

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCc-eeEeeccccccchhhhhhC-------CCCCCcccHhHHHHHH
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPK-TIMLVGTLAYMASEYISTG-------RVSKELDVFSFRVVAL   76 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~g~~~y~aPE~~~~~-------~~~~~~Dv~s~G~vl~   76 (231)
                      ..||||||.||+++.++.+||+|||++.......... .....++..|+|||++...       .++.++|+||+|++++
T Consensus       121 i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~  200 (269)
T cd05087         121 FIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIW  200 (269)
T ss_pred             EeccccCcceEEEcCCCcEEECCccccccccCcceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHH
Confidence            4699999999999999999999999986543221111 1223456789999998532       3577899999999999


Q ss_pred             HHHh-CCCccccc
Q 045790           77 EIAT-GRKVINRY   88 (231)
Q Consensus        77 el~~-g~~p~~~~   88 (231)
                      ++++ |..||...
T Consensus       201 el~~~g~~p~~~~  213 (269)
T cd05087         201 ELFELGSQPYRHL  213 (269)
T ss_pred             HHHhCCCCCCCCC
Confidence            9996 99999653

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.80  E-value=8.7e-20  Score=146.18  Aligned_cols=139  Identities=20%  Similarity=0.123  Sum_probs=101.9

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCc
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      ..|+|||++||+++.++.++|+|||++.......  ......++..|++||.+....++.++|+|++|++++++++|..|
T Consensus       114 ~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~--~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p  191 (262)
T cd05572         114 IIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ--KTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPP  191 (262)
T ss_pred             cccCCCCHHHEEEcCCCCEEEeeCCcccccCccc--ccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCC
Confidence            3599999999999999999999999987764322  22334678889999998777789999999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |.....                                        +.........         .......++......
T Consensus       192 ~~~~~~----------------------------------------~~~~~~~~~~---------~~~~~~~~~~~~~~~  222 (262)
T cd05572         192 FGEDDE----------------------------------------DPMEIYNDIL---------KGNGKLEFPNYIDKA  222 (262)
T ss_pred             cCCCCC----------------------------------------CHHHHHHHHh---------ccCCCCCCCcccCHH
Confidence            964331                                        0001111110         000011111122456


Q ss_pred             HHHHHHhhcCCCCCCCCC-----HHHHHHHHhccc
Q 045790          165 LLIVGLWCAHPDRCFRPS-----IRQAIQVLNFET  194 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps-----~~ell~~l~~~~  194 (231)
                      +..++..||+.+|++||+     +.|+++|+++..
T Consensus       223 ~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~  257 (262)
T cd05572         223 AKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNG  257 (262)
T ss_pred             HHHHHHHHccCChhhCcCCcccCHHHHhcChhhhC
Confidence            788999999999999999     999999999864

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.80  E-value=1.2e-19  Score=145.76  Aligned_cols=135  Identities=18%  Similarity=0.137  Sum_probs=95.3

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCC--CceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELG--PKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~   83 (231)
                      .|+||||+||+++.++.++|+|||++........  .......++..|+|||.+.+..++.++|+||+|+++|++++|+.
T Consensus       128 ~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~  207 (265)
T cd06652         128 VHRDIKGANILRDSVGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKP  207 (265)
T ss_pred             ecCCCCHHHEEecCCCCEEECcCccccccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCC
Confidence            5999999999999999999999999875432111  11123457788999999987778999999999999999999999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||......                                         .... +..         ........+.....
T Consensus       208 p~~~~~~~-----------------------------------------~~~~-~~~---------~~~~~~~~~~~~~~  236 (265)
T cd06652         208 PWAEFEAM-----------------------------------------AAIF-KIA---------TQPTNPVLPPHVSD  236 (265)
T ss_pred             CCCccchH-----------------------------------------HHHH-HHh---------cCCCCCCCchhhCH
Confidence            98643211                                         0000 000         00001112223344


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      .+..++.+|+. +|++||++.+|++|.+.
T Consensus       237 ~~~~~i~~~l~-~p~~Rp~~~~il~~~~~  264 (265)
T cd06652         237 HCRDFLKRIFV-EAKLRPSADELLRHTFV  264 (265)
T ss_pred             HHHHHHHHHhc-ChhhCCCHHHHhcCccc
Confidence            56677788884 89999999999998764

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.80  E-value=1.3e-19  Score=145.85  Aligned_cols=135  Identities=21%  Similarity=0.245  Sum_probs=95.0

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCce-eEee---ccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKT-IMLV---GTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-   80 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~-~~~~---g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-   80 (231)
                      .||||||+||+++.++.++++|||++........... ....   .+..|++||.+.+..++.++||||+|++++|+++ 
T Consensus       128 ~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~  207 (269)
T cd05065         128 VHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSY  207 (269)
T ss_pred             eecccChheEEEcCCCcEEECCCccccccccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcC
Confidence            4999999999999999999999999876543221111 1111   1346999999988888999999999999999886 


Q ss_pred             CCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHH
Q 045790           81 GRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQ  160 (231)
Q Consensus        81 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  160 (231)
                      |..||......                                       .+..++...             ........
T Consensus       208 g~~p~~~~~~~---------------------------------------~~~~~i~~~-------------~~~~~~~~  235 (269)
T cd05065         208 GERPYWDMSNQ---------------------------------------DVINAIEQD-------------YRLPPPMD  235 (269)
T ss_pred             CCCCCCCCCHH---------------------------------------HHHHHHHcC-------------CcCCCccc
Confidence            99998643321                                       111111100             00001112


Q ss_pred             HHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          161 QMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       161 ~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      ....+.+++..||+.+|++||++.+|+..|..
T Consensus       236 ~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  267 (269)
T cd05065         236 CPTALHQLMLDCWQKDRNARPKFGQIVSTLDK  267 (269)
T ss_pred             CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHh
Confidence            23456789999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.80  E-value=9.2e-20  Score=146.84  Aligned_cols=135  Identities=16%  Similarity=0.138  Sum_probs=98.2

Q ss_pred             eeecCCCCCCeeeCCCC-cEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCC
Q 045790            5 AYSRSPELPPGRGDFNF-NAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRK   83 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~-~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~   83 (231)
                      -+||||||+||+++.++ .++|+|||++......     ....++..|+|||++.+..++.++|+||+|++++++++|+.
T Consensus       130 i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~  204 (267)
T PHA03390        130 IIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTP-----SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKH  204 (267)
T ss_pred             eeeCCCCHHHEEEeCCCCeEEEecCccceecCCC-----ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCC
Confidence            36999999999999888 8999999998765432     22357789999999988888999999999999999999999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||......                                     ......+.....          ...  ........
T Consensus       205 p~~~~~~~-------------------------------------~~~~~~~~~~~~----------~~~--~~~~~~~~  235 (267)
T PHA03390        205 PFKEDEDE-------------------------------------ELDLESLLKRQQ----------KKL--PFIKNVSK  235 (267)
T ss_pred             CCCCCCcc-------------------------------------hhhHHHHHHhhc----------ccC--CcccccCH
Confidence            99633211                                     011111111110          000  00112234


Q ss_pred             HHHHHHHhhcCCCCCCCCC-HHHHHHHHhcc
Q 045790          164 CLLIVGLWCAHPDRCFRPS-IRQAIQVLNFE  193 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps-~~ell~~l~~~  193 (231)
                      .+.+++..||+.+|.+|++ +.++++|.++.
T Consensus       236 ~~~~li~~~l~~~p~~R~~~~~~~l~h~~~~  266 (267)
T PHA03390        236 NANDFVQSMLKYNINYRLTNYNEIIKHPFLK  266 (267)
T ss_pred             HHHHHHHHHhccChhhCCchHHHHhcCCccc
Confidence            5678889999999999996 69999998874

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.80  E-value=2.1e-19  Score=163.84  Aligned_cols=140  Identities=19%  Similarity=0.168  Sum_probs=98.7

Q ss_pred             eeecCCCCCCeeeCC-----------------CCcEEEeccccccccCCCCCCceeEeeccccccchhhhhh--CCCCCC
Q 045790            5 AYSRSPELPPGRGDF-----------------NFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIST--GRVSKE   65 (231)
Q Consensus         5 ~~~rdlk~~nil~~~-----------------~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~   65 (231)
                      -+||||||+|||++.                 ...+||+|||++..+....  ......|++.|+|||++.+  ..++.+
T Consensus       146 IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s--~~~s~vGTp~YmAPEvL~ge~~~~s~K  223 (1021)
T PTZ00266        146 VLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIES--MAHSCVGTPYYWSPELLLHETKSYDDK  223 (1021)
T ss_pred             ceeccCcHHHeEeecCccccccccccccccCCCCceEEccCCccccccccc--cccccCCCccccCHHHHhccCCCCCch
Confidence            479999999999964                 3358999999997654321  2234578999999999854  347889


Q ss_pred             cccHhHHHHHHHHHhCCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchh
Q 045790           66 LDVFSFRVVALEIATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKL  145 (231)
Q Consensus        66 ~Dv~s~G~vl~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (231)
                      +|||||||++|+|++|..||.....                                         +...+..+...   
T Consensus       224 SDVWSLG~ILYELLTGk~PF~~~~~-----------------------------------------~~qli~~lk~~---  259 (1021)
T PTZ00266        224 SDMWALGCIIYELCSGKTPFHKANN-----------------------------------------FSQLISELKRG---  259 (1021)
T ss_pred             hHHHHHHHHHHHHHHCCCCCCcCCc-----------------------------------------HHHHHHHHhcC---
Confidence            9999999999999999999964321                                         11111111100   


Q ss_pred             hhhhcccccCcccHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCCCC
Q 045790          146 LSAANERLDSRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTMPN  198 (231)
Q Consensus       146 ~~~~~~~l~~~~~~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~~~  198 (231)
                           +.+..   ......+..|+..||+.+|++||++.|++.+.+.....++
T Consensus       260 -----p~lpi---~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i~~p  304 (1021)
T PTZ00266        260 -----PDLPI---KGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKNVGPP  304 (1021)
T ss_pred             -----CCCCc---CCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhhcCCC
Confidence                 00000   0112456789999999999999999999998887655443

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.80  E-value=5.5e-20  Score=149.20  Aligned_cols=150  Identities=16%  Similarity=0.101  Sum_probs=97.0

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCc--eeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPK--TIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~   83 (231)
                      .||||||+||+++.++.++|+|||++..........  .....++..|+|||.+.+..++.++|+||+|+++++++++..
T Consensus       131 ~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~  210 (284)
T cd05079         131 VHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCD  210 (284)
T ss_pred             eecccchheEEEcCCCCEEECCCccccccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCC
Confidence            499999999999999999999999987654322211  123345667999999887788999999999999999999776


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      |.......  ......+.                         ........+. .......         ..........
T Consensus       211 ~~~~~~~~--~~~~~~~~-------------------------~~~~~~~~~~-~~~~~~~---------~~~~~~~~~~  253 (284)
T cd05079         211 SESSPMTL--FLKMIGPT-------------------------HGQMTVTRLV-RVLEEGK---------RLPRPPNCPE  253 (284)
T ss_pred             CCccccch--hhhhcccc-------------------------cccccHHHHH-HHHHcCc---------cCCCCCCCCH
Confidence            54321100  00000000                         0000111111 1111110         0011112345


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      .+.+++.+||+.+|++|||+.++++.+..
T Consensus       254 ~~~~li~~~l~~~p~~Rpt~~~il~~l~~  282 (284)
T cd05079         254 EVYQLMRKCWEFQPSKRTTFQNLIEGFEA  282 (284)
T ss_pred             HHHHHHHHHccCCcccCcCHHHHHHHHHh
Confidence            68889999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.80  E-value=4.2e-20  Score=153.31  Aligned_cols=166  Identities=19%  Similarity=0.156  Sum_probs=105.5

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCC---ceeEeeccccccchhhhhh-CCCCCCcccHhHHHHHHHHHhC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGP---KTIMLVGTLAYMASEYIST-GRVSKELDVFSFRVVALEIATG   81 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~---~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~el~~g   81 (231)
                      .||||||+||+++.++.+||+|||+++........   ......|+..|++||++.+ ..++.++|+||+|++++++++|
T Consensus       127 vH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g  206 (332)
T cd07857         127 LHRDLKPGNLLVNADCELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGR  206 (332)
T ss_pred             ccCCCCHHHeEEcCCCCEEeCcCCCceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhC
Confidence            59999999999999999999999998765432111   1223467889999998765 3578899999999999999999


Q ss_pred             CCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHH
Q 045790           82 RKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQ  161 (231)
Q Consensus        82 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  161 (231)
                      +.||...........+..............+..               .....+........      ...+.. .....
T Consensus       207 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~------~~~~~~-~~~~~  264 (332)
T cd07857         207 KPVFKGKDYVDQLNQILQVLGTPDEETLSRIGS---------------PKAQNYIRSLPNIP------KKPFES-IFPNA  264 (332)
T ss_pred             CcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhh---------------hhHHHHHHhccccC------CcchHh-hCCCC
Confidence            999977654444444443222211111000000               00000000000000      000000 00011


Q ss_pred             HHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcc
Q 045790          162 MTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFE  193 (231)
Q Consensus       162 ~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~  193 (231)
                      ...+..++.+|++.||++|||+.+++.|.+..
T Consensus       265 ~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~  296 (332)
T cd07857         265 NPLALDLLEKLLAFDPTKRISVEEALEHPYLA  296 (332)
T ss_pred             CHHHHHHHHHHccCCcccCCCHHHHhcChhhh
Confidence            34577899999999999999999999999874

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.80  E-value=1.3e-19  Score=145.85  Aligned_cols=139  Identities=22%  Similarity=0.231  Sum_probs=96.1

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCC-ceeEeeccccccchhhhhhCC--CCCCcccHhHHHHHHHHHhCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGP-KTIMLVGTLAYMASEYISTGR--VSKELDVFSFRVVALEIATGR   82 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~--~~~~~Dv~s~G~vl~el~~g~   82 (231)
                      .|||||+.||+++.++.++++|||++......... ......++..|++||.+....  ++.++|+||+|++++++++|.
T Consensus       130 ~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~  209 (272)
T cd06629         130 LHRDLKADNLLVDADGICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGR  209 (272)
T ss_pred             eecCCChhhEEEcCCCeEEEeeccccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCC
Confidence            59999999999999999999999998765322111 123345778899999986544  788999999999999999999


Q ss_pred             CccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           83 KVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        83 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      .||.......                                         . ........ ....+...    ......
T Consensus       210 ~p~~~~~~~~-----------------------------------------~-~~~~~~~~-~~~~~~~~----~~~~~~  242 (272)
T cd06629         210 RPWSDEEAIA-----------------------------------------A-MFKLGNKR-SAPPIPPD----VSMNLS  242 (272)
T ss_pred             CCCcCcchHH-----------------------------------------H-HHHhhccc-cCCcCCcc----ccccCC
Confidence            9985432110                                         0 00000000 00000011    111123


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHh
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLN  191 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~  191 (231)
                      ..+.+++..||+.+|++|||+.++++|++
T Consensus       243 ~~~~~li~~~l~~~p~~Rps~~~il~~~~  271 (272)
T cd06629         243 PVALDFLNACFTINPDNRPTARELLQHPF  271 (272)
T ss_pred             HHHHHHHHHHhcCChhhCCCHHHHhhCCC
Confidence            46677899999999999999999999975

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.80  E-value=2.7e-19  Score=148.70  Aligned_cols=164  Identities=15%  Similarity=0.093  Sum_probs=102.4

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCC----CceeEeeccccccchhhhhh-CCCCCCcccHhHHHHHHHHHh
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELG----PKTIMLVGTLAYMASEYIST-GRVSKELDVFSFRVVALEIAT   80 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~----~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~el~~   80 (231)
                      .||||||+||+++.++.+||+|||++........    .......|+..|++||.+.+ ..++.++|+||+|++++++++
T Consensus       129 ~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~t  208 (337)
T cd07852         129 IHRDLKPSNILLNSDCRVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLL  208 (337)
T ss_pred             ecCCCCHHHEEEcCCCcEEEeeccchhccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHh
Confidence            5999999999999999999999999876543221    12233567889999998755 347888999999999999999


Q ss_pred             CCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhh-ccccc--Ccc
Q 045790           81 GRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAA-NERLD--SRF  157 (231)
Q Consensus        81 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~--~~~  157 (231)
                      |+.||..........++.........                       ..+..+. .... ....... .....  ...
T Consensus       209 g~~pf~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~  263 (337)
T cd07852         209 GKPLFPGTSTLNQLEKIIEVIGPPSA-----------------------EDIESIK-SPFA-ATMLDSLPSRPRKPLDEL  263 (337)
T ss_pred             CCCCCCCCChHHHHHHHHHHhCCCCH-----------------------HHHHHHH-hhhH-HHhhhhcccccccchhhh
Confidence            99999754433222222111110000                       0000000 0000 0000000 00000  000


Q ss_pred             cHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          158 DEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       158 ~~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      .......+.+++.+||+.+|++|||+.++++|.+...
T Consensus       264 ~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~  300 (337)
T cd07852         264 LPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQ  300 (337)
T ss_pred             ccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhh
Confidence            0012346788999999999999999999999987755

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.80  E-value=1.2e-19  Score=144.78  Aligned_cols=133  Identities=17%  Similarity=0.153  Sum_probs=97.7

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+||+++.++.+||+|||++........ ......++..|++||.+.+..++.++|+||+|++++++++|..||
T Consensus       123 ~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~-~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~  201 (256)
T cd08221         123 LHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS-MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTF  201 (256)
T ss_pred             cccCCChHhEEEeCCCCEEECcCcceEEcccccc-cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCC
Confidence            4999999999999999999999999876543221 223456788999999987777889999999999999999999998


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      .......                                          ....... .        .+. .........+
T Consensus       202 ~~~~~~~------------------------------------------~~~~~~~-~--------~~~-~~~~~~~~~~  229 (256)
T cd08221         202 DATNPLN------------------------------------------LVVKIVQ-G--------NYT-PVVSVYSSEL  229 (256)
T ss_pred             CCCCHHH------------------------------------------HHHHHHc-C--------CCC-CCccccCHHH
Confidence            6433211                                          1111100 0        000 0011223457


Q ss_pred             HHHHHhhcCCCCCCCCCHHHHHHHHh
Q 045790          166 LIVGLWCAHPDRCFRPSIRQAIQVLN  191 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps~~ell~~l~  191 (231)
                      ..++.+||+.+|++||++.++++++.
T Consensus       230 ~~~i~~~l~~~p~~R~s~~~ll~~~~  255 (256)
T cd08221         230 ISLVHSLLQQDPEKRPTADEVLDQPL  255 (256)
T ss_pred             HHHHHHHcccCcccCCCHHHHhhCcC
Confidence            78899999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.80  E-value=9.6e-20  Score=147.67  Aligned_cols=83  Identities=20%  Similarity=0.185  Sum_probs=67.2

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhC-CCCCCcccHhHHHHHHHHHhCCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTG-RVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      +||||+|+||+++.++.++|+|||++....... .......++..|++||++.+. .++.++||||+|++++++++|..|
T Consensus       122 ~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~  200 (286)
T cd07846         122 IHRDIKPENILVSQSGVVKLCDFGFARTLAAPG-EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPL  200 (286)
T ss_pred             cccCCCHHHEEECCCCcEEEEeeeeeeeccCCc-cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCC
Confidence            599999999999999999999999987654322 222334577889999998653 367889999999999999999999


Q ss_pred             cccch
Q 045790           85 INRYK   89 (231)
Q Consensus        85 ~~~~~   89 (231)
                      |....
T Consensus       201 ~~~~~  205 (286)
T cd07846         201 FPGDS  205 (286)
T ss_pred             CCCCc
Confidence            86543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.80  E-value=9.3e-21  Score=159.85  Aligned_cols=85  Identities=24%  Similarity=0.163  Sum_probs=68.3

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCC------------------------------------------CCce
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHEL------------------------------------------GPKT   42 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~------------------------------------------~~~~   42 (231)
                      -+||||||+|||++.++.+||+|||++..+....                                          ....
T Consensus       122 ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (376)
T cd05598         122 FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLA  201 (376)
T ss_pred             eEeCCCCHHHEEECCCCCEEEEeCCCCccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccc
Confidence            3599999999999999999999999874321000                                          0001


Q ss_pred             eEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCccccch
Q 045790           43 IMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVINRYK   89 (231)
Q Consensus        43 ~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~~~~~   89 (231)
                      ...+|+..|+|||++.+..++.++||||+||++++|++|+.||....
T Consensus       202 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~  248 (376)
T cd05598         202 HSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLADT  248 (376)
T ss_pred             cccCCCccccCHHHHcCCCCCcceeeeeccceeeehhhCCCCCCCCC
Confidence            13468999999999988889999999999999999999999997544

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.80  E-value=2.1e-20  Score=156.87  Aligned_cols=84  Identities=24%  Similarity=0.194  Sum_probs=69.2

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCC----------------------------------CceeEeeccccc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELG----------------------------------PKTIMLVGTLAY   51 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~----------------------------------~~~~~~~g~~~y   51 (231)
                      .||||||+|||++.++.++|+|||++........                                  ......+|+..|
T Consensus       123 vHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y  202 (360)
T cd05627         123 IHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDY  202 (360)
T ss_pred             EccCCCHHHEEECCCCCEEEeeccCCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCccc
Confidence            5999999999999999999999999865421100                                  001234689999


Q ss_pred             cchhhhhhCCCCCCcccHhHHHHHHHHHhCCCccccch
Q 045790           52 MASEYISTGRVSKELDVFSFRVVALEIATGRKVINRYK   89 (231)
Q Consensus        52 ~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~~~~~   89 (231)
                      +|||++.+..++.++|+||+||++++|++|+.||....
T Consensus       203 ~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~~~  240 (360)
T cd05627         203 IAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSET  240 (360)
T ss_pred             cCHHHHcCCCCCCcceeccccceeeecccCCCCCCCCC
Confidence            99999988889999999999999999999999997544

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.80  E-value=1e-19  Score=149.58  Aligned_cols=84  Identities=23%  Similarity=0.229  Sum_probs=68.0

Q ss_pred             eecCCCCCCeeeCC----CCcEEEeccccccccCCCCC--CceeEeeccccccchhhhhhC-CCCCCcccHhHHHHHHHH
Q 045790            6 YSRSPELPPGRGDF----NFNAKLGDFGLARLMDHELG--PKTIMLVGTLAYMASEYISTG-RVSKELDVFSFRVVALEI   78 (231)
Q Consensus         6 ~~rdlk~~nil~~~----~~~~kl~Dfg~~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~el   78 (231)
                      .||||||+||+++.    ++.+||+|||++........  .......++..|+|||.+.+. .++.++|+||+|++++++
T Consensus       130 ~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l  209 (316)
T cd07842         130 LHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAEL  209 (316)
T ss_pred             eeCCCCHHHEEEcCCCCccceEEECCCccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHH
Confidence            59999999999999    89999999999876543222  112234567889999988664 478899999999999999


Q ss_pred             HhCCCccccch
Q 045790           79 ATGRKVINRYK   89 (231)
Q Consensus        79 ~~g~~p~~~~~   89 (231)
                      ++|..||....
T Consensus       210 ~~~~~~~~~~~  220 (316)
T cd07842         210 LTLEPIFKGRE  220 (316)
T ss_pred             HhcCCCCcCCc
Confidence            99999997544

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.80  E-value=9.8e-20  Score=153.70  Aligned_cols=84  Identities=23%  Similarity=0.194  Sum_probs=67.8

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCC-------------C--------------------------------
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELG-------------P--------------------------------   40 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~-------------~--------------------------------   40 (231)
                      .||||||+|||++.++.+||+|||+++.......             .                                
T Consensus       123 vHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (377)
T cd05629         123 IHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRR  202 (377)
T ss_pred             eccCCCHHHEEECCCCCEEEeecccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhccc
Confidence            5999999999999999999999999853211000             0                                


Q ss_pred             -ceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCccccch
Q 045790           41 -KTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVINRYK   89 (231)
Q Consensus        41 -~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~~~~~   89 (231)
                       .....+|+..|+|||++.+..++.++||||+||++++|++|..||....
T Consensus       203 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~  252 (377)
T cd05629         203 LMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFECLIGWPPFCSEN  252 (377)
T ss_pred             ccccccCCCccccCHHHHccCCCCCceeeEecchhhhhhhcCCCCCCCCC
Confidence             0012468999999999988889999999999999999999999997544

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.80  E-value=1.1e-19  Score=145.39  Aligned_cols=138  Identities=25%  Similarity=0.236  Sum_probs=95.9

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCce---eEeeccccccchhhhhhCC---CCCCcccHhHHHHHHHH
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKT---IMLVGTLAYMASEYISTGR---VSKELDVFSFRVVALEI   78 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~---~~~~g~~~y~aPE~~~~~~---~~~~~Dv~s~G~vl~el   78 (231)
                      .+|+|||+.||+++.++.+||+|||++...........   ....++..|++||.+....   +..++|+|++|++++++
T Consensus       120 i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l  199 (264)
T cd06626         120 IVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEM  199 (264)
T ss_pred             cccCCCCHHHEEECCCCCEEEcccccccccCCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHH
Confidence            36999999999999999999999999876543222111   1245677899999987655   78899999999999999


Q ss_pred             HhCCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCccc
Q 045790           79 ATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFD  158 (231)
Q Consensus        79 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  158 (231)
                      ++|..||......                                         ........  ..    ..+.+...  
T Consensus       200 ~~g~~pf~~~~~~-----------------------------------------~~~~~~~~--~~----~~~~~~~~--  230 (264)
T cd06626         200 ATGKRPWSELDNE-----------------------------------------FQIMFHVG--AG----HKPPIPDS--  230 (264)
T ss_pred             HhCCCCccCCcch-----------------------------------------HHHHHHHh--cC----CCCCCCcc--
Confidence            9999999643210                                         00000000  00    00111000  


Q ss_pred             HHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHh
Q 045790          159 EQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLN  191 (231)
Q Consensus       159 ~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~  191 (231)
                      ......+.+++.+||+.+|++|||+.+++.|.+
T Consensus       231 ~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~  263 (264)
T cd06626         231 LQLSPEGKDFLDRCLESDPKKRPTASELLQHPF  263 (264)
T ss_pred             cccCHHHHHHHHHHccCCcccCCCHHHHhcCCC
Confidence            011334568899999999999999999998865

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.80  E-value=9.7e-20  Score=146.31  Aligned_cols=81  Identities=22%  Similarity=0.258  Sum_probs=66.4

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhh---hCCCCCCcccHhHHHHHHHHHhCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIS---TGRVSKELDVFSFRVVALEIATGR   82 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~s~G~vl~el~~g~   82 (231)
                      .||||||+||+++.++.++|+|||++....... .......|+..|+|||++.   ...++.++|+||+|++++++++|.
T Consensus       128 ~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~  206 (267)
T cd06645         128 MHRDIKGANILLTDNGHVKLADFGVSAQITATI-AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQ  206 (267)
T ss_pred             ecCCCCHHHEEECCCCCEEECcceeeeEccCcc-cccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCC
Confidence            599999999999999999999999987654221 1223456888999999974   345788999999999999999999


Q ss_pred             Ccccc
Q 045790           83 KVINR   87 (231)
Q Consensus        83 ~p~~~   87 (231)
                      .||..
T Consensus       207 ~p~~~  211 (267)
T cd06645         207 PPMFD  211 (267)
T ss_pred             CCccc
Confidence            99864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.80  E-value=1.4e-19  Score=148.35  Aligned_cols=164  Identities=19%  Similarity=0.098  Sum_probs=99.8

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCC----------ceeEeeccccccchhhhhhC-CCCCCcccHhHHHH
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGP----------KTIMLVGTLAYMASEYISTG-RVSKELDVFSFRVV   74 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~----------~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~v   74 (231)
                      .||||||+||+++.++.++|+|||++.........          ......++..|+|||.+.+. .++.++||||+|++
T Consensus       137 ~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~i  216 (311)
T cd07866         137 LHRDIKAANILIDNQGILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCV  216 (311)
T ss_pred             ecCCCCHHHEEECCCCCEEECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHH
Confidence            59999999999999999999999998765422111          11234567789999988654 47889999999999


Q ss_pred             HHHHHhCCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhccccc
Q 045790           75 ALEIATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLD  154 (231)
Q Consensus        75 l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  154 (231)
                      ++++++|+.||...........+...........+..+     .....         ...+        .......+.+.
T Consensus       217 l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~---------~~~~--------~~~~~~~~~~~  274 (311)
T cd07866         217 FAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGW-----RSLPG---------CEGV--------HSFTNYPRTLE  274 (311)
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhchhh-----hhccc---------cccc--------ccCCCCCccHH
Confidence            99999999999765543322222111000000000000     00000         0000        00000000000


Q ss_pred             CcccHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          155 SRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       155 ~~~~~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      ..+ ......+.+++.+|++.||++|||+.+++.|.+|
T Consensus       275 ~~~-~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~~f  311 (311)
T cd07866         275 ERF-GKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF  311 (311)
T ss_pred             HHc-ccCChhHHHHHHHHcccCcccCcCHHHHhcCCCC
Confidence            000 0112457889999999999999999999999875

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.80  E-value=1.3e-19  Score=146.35  Aligned_cols=137  Identities=23%  Similarity=0.236  Sum_probs=98.7

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhC-CCCCCcccHhHHHHHHHHHhCCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTG-RVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      .|+||+|+||+++.++.++++|||++....... .......|+..|++||.+..+ .++.++|+||+|+++|++++|..|
T Consensus       123 ~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p  201 (277)
T cd06917         123 IHRDIKAANILVTNTGNVKLCDFGVAALLNQNS-SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPP  201 (277)
T ss_pred             ccCCcCHHHEEEcCCCCEEEccCCceeecCCCc-cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCC
Confidence            599999999999999999999999987765332 222334678899999998654 468899999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |..........                                       +.         .....+.+...   .....
T Consensus       202 ~~~~~~~~~~~---------------------------------------~~---------~~~~~~~~~~~---~~~~~  230 (277)
T cd06917         202 YSDVDAFRAMM---------------------------------------LI---------PKSKPPRLEDN---GYSKL  230 (277)
T ss_pred             CCCCChhhhhh---------------------------------------cc---------ccCCCCCCCcc---cCCHH
Confidence            96433210000                                       00         00000111110   02345


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      +.+++.+||+.||++||++.+++.+.++..
T Consensus       231 ~~~~i~~~l~~~p~~R~~~~~il~~~~~~~  260 (277)
T cd06917         231 LREFVAACLDEEPKERLSAEELLKSKWIKA  260 (277)
T ss_pred             HHHHHHHHcCCCcccCcCHHHHhhChHhhc
Confidence            678899999999999999999999988744

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.80  E-value=2.3e-19  Score=142.93  Aligned_cols=130  Identities=18%  Similarity=0.118  Sum_probs=98.1

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      +||||++.||+++.++.+||+|||++......   ......++..|++||.+.+..++.++|+||+|++++++++|+.||
T Consensus       125 ~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~---~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~  201 (256)
T cd08530         125 LHRDLKSANILLVANDLVKIGDLGISKVLKKN---MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPF  201 (256)
T ss_pred             ccCCCCcceEEEecCCcEEEeeccchhhhccC---CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence            59999999999999999999999998776543   122345778999999998888888999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      .......+...+.                                                    ..............+
T Consensus       202 ~~~~~~~~~~~~~----------------------------------------------------~~~~~~~~~~~~~~~  229 (256)
T cd08530         202 EARSMQDLRYKVQ----------------------------------------------------RGKYPPIPPIYSQDL  229 (256)
T ss_pred             CCCCHHHHHHHHh----------------------------------------------------cCCCCCCchhhCHHH
Confidence            6543221100000                                                    000011112334557


Q ss_pred             HHHHHhhcCCCCCCCCCHHHHHHHH
Q 045790          166 LIVGLWCAHPDRCFRPSIRQAIQVL  190 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps~~ell~~l  190 (231)
                      ..++.+|++.+|++||++.++++|+
T Consensus       230 ~~li~~~l~~~p~~Rp~~~~~l~~p  254 (256)
T cd08530         230 QNFIRSMLQVKPKLRPNCDKILASP  254 (256)
T ss_pred             HHHHHHHcCCCcccCCCHHHHhcCC
Confidence            8899999999999999999999985

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.79  E-value=1.2e-19  Score=145.87  Aligned_cols=135  Identities=20%  Similarity=0.184  Sum_probs=94.9

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhh-----CCCCCCcccHhHHHHHHHHHh
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIST-----GRVSKELDVFSFRVVALEIAT   80 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-----~~~~~~~Dv~s~G~vl~el~~   80 (231)
                      .|+||+|+||+++.++.++|+|||++....... .......++..|+|||.+..     ..++.++||||+|++++++++
T Consensus       135 ~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~  213 (275)
T cd06608         135 IHRDIKGQNILLTKNAEVKLVDFGVSAQLDSTL-GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELAD  213 (275)
T ss_pred             ccCCCCHHHEEEccCCeEEECCCccceecccch-hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHh
Confidence            599999999999999999999999987654221 12233467888999998743     236778999999999999999


Q ss_pred             CCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHH
Q 045790           81 GRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQ  160 (231)
Q Consensus        81 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  160 (231)
                      |..||...........+                                          .. .     ..+.+  .....
T Consensus       214 g~~p~~~~~~~~~~~~~------------------------------------------~~-~-----~~~~~--~~~~~  243 (275)
T cd06608         214 GKPPLCDMHPMRALFKI------------------------------------------PR-N-----PPPTL--KSPEN  243 (275)
T ss_pred             CCCCccccchHHHHHHh------------------------------------------hc-c-----CCCCC--Cchhh
Confidence            99999643211000000                                          00 0     00000  00111


Q ss_pred             HHHHHHHHHHhhcCCCCCCCCCHHHHHHHHh
Q 045790          161 QMTCLLIVGLWCAHPDRCFRPSIRQAIQVLN  191 (231)
Q Consensus       161 ~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~  191 (231)
                      ....+.+++.+||..||++|||+.+|++|++
T Consensus       244 ~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~  274 (275)
T cd06608         244 WSKKFNDFISECLIKNYEQRPFMEELLEHPF  274 (275)
T ss_pred             cCHHHHHHHHHHhhcChhhCcCHHHHhcCCC
Confidence            2345678999999999999999999999875

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.79  E-value=2e-19  Score=145.02  Aligned_cols=135  Identities=19%  Similarity=0.135  Sum_probs=94.9

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~p   84 (231)
                      .||||||+||+++.++.++++|||++...............++..|++||.+.+..++.++|+||+|++++++++ |..|
T Consensus       139 ~H~dlkp~Nili~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p  218 (275)
T cd05046         139 VHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELP  218 (275)
T ss_pred             ccCcCccceEEEeCCCcEEEcccccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence            599999999999999999999999986543222112223345667999999887778899999999999999998 7788


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |.......                                       +...   .. .....        ..........
T Consensus       219 ~~~~~~~~---------------------------------------~~~~---~~-~~~~~--------~~~~~~~~~~  247 (275)
T cd05046         219 FYGLSDEE---------------------------------------VLNR---LQ-AGKLE--------LPVPEGCPSR  247 (275)
T ss_pred             ccccchHH---------------------------------------HHHH---HH-cCCcC--------CCCCCCCCHH
Confidence            85432111                                       1110   00 00000        0001112246


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHh
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLN  191 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~  191 (231)
                      +.+++.+||+.+|++||++.+++..+.
T Consensus       248 l~~~i~~~l~~~p~~Rp~~~~~l~~l~  274 (275)
T cd05046         248 LYKLMTRCWAVNPKDRPSFSELVSALG  274 (275)
T ss_pred             HHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence            788999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.79  E-value=1.3e-19  Score=147.56  Aligned_cols=83  Identities=22%  Similarity=0.191  Sum_probs=66.5

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhC-CCCCCcccHhHHHHHHHHHhCCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTG-RVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      .||||||+||+++.++.++|+|||+++....... ......++..|++||.+.+. .++.++|+||+|++++++++|..|
T Consensus       125 ~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~  203 (291)
T cd07870         125 LHRDLKPQNLLISYLGELKLADFGLARAKSIPSQ-TYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPA  203 (291)
T ss_pred             ccCCCChHHEEEcCCCcEEEeccccccccCCCCC-CCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence            5999999999999999999999999875432211 11233567889999998653 477889999999999999999999


Q ss_pred             cccch
Q 045790           85 INRYK   89 (231)
Q Consensus        85 ~~~~~   89 (231)
                      |....
T Consensus       204 f~~~~  208 (291)
T cd07870         204 FPGVS  208 (291)
T ss_pred             CCCch
Confidence            97543

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=99.79  E-value=2.9e-19  Score=157.07  Aligned_cols=142  Identities=17%  Similarity=0.046  Sum_probs=102.3

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCc--------eeEeeccccccchhhh---hhCCCCCCcccHhHHH
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPK--------TIMLVGTLAYMASEYI---STGRVSKELDVFSFRV   73 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~--------~~~~~g~~~y~aPE~~---~~~~~~~~~Dv~s~G~   73 (231)
                      ..|||||-+||||+.++..||||||.+.-........        .....-|+.|++||.+   .+..++.|+|||++||
T Consensus       167 iIHRDLKiENvLls~~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGc  246 (738)
T KOG1989|consen  167 IIHRDLKIENVLLSADGNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGC  246 (738)
T ss_pred             cchhhhhhhheEEcCCCCEEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHH
Confidence            4699999999999999999999999875322111100        0112347899999987   4567899999999999


Q ss_pred             HHHHHHhCCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccc
Q 045790           74 VALEIATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERL  153 (231)
Q Consensus        74 vl~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  153 (231)
                      ++|-|.....||.....                                                       ..+++-.+
T Consensus       247 lLYkLCy~t~PFe~sg~-------------------------------------------------------laIlng~Y  271 (738)
T KOG1989|consen  247 LLYKLCYFTTPFEESGK-------------------------------------------------------LAILNGNY  271 (738)
T ss_pred             HHHHHHHhCCCcCcCcc-------------------------------------------------------eeEEeccc
Confidence            99999999999975321                                                       11122222


Q ss_pred             cCcccHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCCCCCCC
Q 045790          154 DSRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTMPNLPS  201 (231)
Q Consensus       154 ~~~~~~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~~~~~~  201 (231)
                      .-.-......++..|+..||+.||++||.+-||+.++......+.+..
T Consensus       272 ~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~~~~~  319 (738)
T KOG1989|consen  272 SFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKPCPIP  319 (738)
T ss_pred             cCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCCCCcc
Confidence            111113456778899999999999999999999988776554444333

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.79  E-value=1.5e-19  Score=150.73  Aligned_cols=166  Identities=15%  Similarity=0.087  Sum_probs=104.4

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhC-CCCCCcccHhHHHHHHHHHhCCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTG-RVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      .||||||+||+++.++.++|+|||++......    .....++..|++||.+.+. .++.++||||+|++++++++|+.|
T Consensus       140 ~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~p  215 (343)
T cd07851         140 IHRDLKPSNIAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTL  215 (343)
T ss_pred             ecCCCCHHHeEECCCCCEEEcccccccccccc----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCC
Confidence            59999999999999999999999998765432    1233567789999998653 578899999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |...........+..............+               .......+.....      ....+.+.. ........
T Consensus       216 f~~~~~~~~~~~i~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~------~~~~~~~~~-~~~~~s~~  273 (343)
T cd07851         216 FPGSDHIDQLKRIMNLVGTPDEELLQKI---------------SSESARNYIQSLP------QMPKKDFKE-VFSGANPL  273 (343)
T ss_pred             CCCCChHHHHHHHHHhcCCCCHHHHhhc---------------cchhHHHHHHhcc------ccCCCCHHH-HhccCCHH
Confidence            9765433222222211111100000000               0000001110000      000000000 00011356


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhcccCCC
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNFETTMP  197 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~~  197 (231)
                      +.+++.+||+.+|++|||+.+|++|.++.....
T Consensus       274 l~dli~~~l~~~P~~Rpt~~ell~h~~~~~~~~  306 (343)
T cd07851         274 AIDLLEKMLVLDPDKRITAAEALAHPYLAEYHD  306 (343)
T ss_pred             HHHHHHHhCCCChhhCCCHHHHhcCCCccccCC
Confidence            789999999999999999999999999876443

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.79  E-value=5.2e-19  Score=146.21  Aligned_cols=165  Identities=19%  Similarity=0.125  Sum_probs=105.0

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCC-CceeEeeccccccchhhhhhCC-CC-----CCcccHhHHHHHHHH
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELG-PKTIMLVGTLAYMASEYISTGR-VS-----KELDVFSFRVVALEI   78 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~-~~-----~~~Dv~s~G~vl~el   78 (231)
                      -|||||++|||+..++.+-|+|||++..+..+.. .....++||.+|||||++.+.- +.     .+.||||+|.|+||+
T Consensus       338 aHRDlkSkNVLvK~DlTccIaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi  417 (534)
T KOG3653|consen  338 AHRDLKSKNVLVKNDLTCCIADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEI  417 (534)
T ss_pred             ccccccccceEEccCCcEEeeccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHH
Confidence            4999999999999999999999999987764332 2245589999999999996643 22     459999999999999


Q ss_pred             HhCCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCccc
Q 045790           79 ATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFD  158 (231)
Q Consensus        79 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  158 (231)
                      +++..-+.....+++.-.+..                    ..     ...+.+.+. +.+....+.+..+.......  
T Consensus       418 ~SRC~~~~~~~vp~Yqlpfe~--------------------ev-----G~hPt~e~m-q~~VV~kK~RP~~p~~W~~h--  469 (534)
T KOG3653|consen  418 ASRCTDADPGPVPEYQLPFEA--------------------EV-----GNHPTLEEM-QELVVRKKQRPKIPDAWRKH--  469 (534)
T ss_pred             HhhcccccCCCCCcccCchhH--------------------Hh-----cCCCCHHHH-HHHHHhhccCCCChhhhhcC--
Confidence            997654432111100000000                    00     111111111 11111111111111111111  


Q ss_pred             HHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCCCCC
Q 045790          159 EQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTMPNL  199 (231)
Q Consensus       159 ~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~~~~  199 (231)
                       .-+.-+.+.+..||..|++.|.|+.-+.+.+.......+.
T Consensus       470 -~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~~~  509 (534)
T KOG3653|consen  470 -AGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLWED  509 (534)
T ss_pred             -ccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccCCc
Confidence             3356678889999999999999999999999887766665

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.79  E-value=4e-20  Score=156.53  Aligned_cols=142  Identities=21%  Similarity=0.186  Sum_probs=103.7

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~p   84 (231)
                      .||||.++|+|+..++.+||+|||+++.... .........-...|+|||++..+.|+.++|||||||++||+++ |..|
T Consensus       284 IHRDIAARNcL~~~~~~vKISDFGLs~~~~~-~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~P  362 (474)
T KOG0194|consen  284 IHRDIAARNCLYSKKGVVKISDFGLSRAGSQ-YVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEP  362 (474)
T ss_pred             cchhHhHHHheecCCCeEEeCccccccCCcc-eeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCC
Confidence            5999999999999999999999999876431 1111111234568999999988899999999999999999998 8889


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |.+....+....+.                                                   -...+...+......
T Consensus       363 y~g~~~~~v~~kI~---------------------------------------------------~~~~r~~~~~~~p~~  391 (474)
T KOG0194|consen  363 YPGMKNYEVKAKIV---------------------------------------------------KNGYRMPIPSKTPKE  391 (474)
T ss_pred             CCCCCHHHHHHHHH---------------------------------------------------hcCccCCCCCCCHHH
Confidence            98765432222221                                                   111112222233455


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhcccCCCCC
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNFETTMPNL  199 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~~~~  199 (231)
                      +..++..||..+|++||||.++.+.++........
T Consensus       392 ~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~~  426 (474)
T KOG0194|consen  392 LAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKEA  426 (474)
T ss_pred             HHHHHHHhccCChhhccCHHHHHHHHHHHHhcccc
Confidence            66777899999999999999999999876655444

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.79  E-value=1.3e-19  Score=144.56  Aligned_cols=134  Identities=22%  Similarity=0.215  Sum_probs=96.4

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCC-CCCCcccHhHHHHHHHHHhCCC
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGR-VSKELDVFSFRVVALEIATGRK   83 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~-~~~~~Dv~s~G~vl~el~~g~~   83 (231)
                      -+|+||+++||+++.++.+||+|||++.......  ......++..|++||.+.... ++.++|+||+|++++++++|..
T Consensus       123 i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~--~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~  200 (258)
T cd06632         123 TVHRDIKGANILVDTNGVVKLADFGMAKQVVEFS--FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKP  200 (258)
T ss_pred             cccCCCCHHHEEECCCCCEEEccCccceeccccc--cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCC
Confidence            3699999999999999999999999987654322  223445788899999987665 8889999999999999999999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||......                                          ........... .        ...+.....
T Consensus       201 pf~~~~~~------------------------------------------~~~~~~~~~~~-~--------~~~~~~~~~  229 (258)
T cd06632         201 PWSQLEGV------------------------------------------AAVFKIGRSKE-L--------PPIPDHLSD  229 (258)
T ss_pred             CcccCcHH------------------------------------------HHHHHHHhccc-C--------CCcCCCcCH
Confidence            98643211                                          01111000000 0        011111234


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHh
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLN  191 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~  191 (231)
                      .+.+++.+||+.+|++||++.+++.|++
T Consensus       230 ~~~~li~~~l~~~p~~Rp~~~~~l~~~~  257 (258)
T cd06632         230 EAKDFILKCLQRDPSLRPTAAELLEHPF  257 (258)
T ss_pred             HHHHHHHHHhhcCcccCcCHHHHhcCCC
Confidence            5577899999999999999999999875

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.79  E-value=1.2e-19  Score=146.80  Aligned_cols=138  Identities=23%  Similarity=0.249  Sum_probs=97.5

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhh----CCCCCCcccHhHHHHHHHHHhC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIST----GRVSKELDVFSFRVVALEIATG   81 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~----~~~~~~~Dv~s~G~vl~el~~g   81 (231)
                      .||||||+||+++.++.+||+|||++.......  ......++..|++||.+.+    ..++.++|+||+|++++++++|
T Consensus       126 ~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g  203 (283)
T cd06617         126 IHRDVKPSNVLINRNGQVKLCDFGISGYLVDSV--AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATG  203 (283)
T ss_pred             ecCCCCHHHEEECCCCCEEEeeccccccccccc--ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhC
Confidence            599999999999999999999999987654221  1122457788999998854    3467889999999999999999


Q ss_pred             CCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHH
Q 045790           82 RKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQ  161 (231)
Q Consensus        82 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  161 (231)
                      +.||.....                                     ....+.    .....      ..+.+..   ...
T Consensus       204 ~~p~~~~~~-------------------------------------~~~~~~----~~~~~------~~~~~~~---~~~  233 (283)
T cd06617         204 RFPYDSWKT-------------------------------------PFQQLK----QVVEE------PSPQLPA---EKF  233 (283)
T ss_pred             CCCCCcccc-------------------------------------CHHHHH----HHHhc------CCCCCCc---ccc
Confidence            999853210                                     000010    00000      0011100   011


Q ss_pred             HHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccC
Q 045790          162 MTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETT  195 (231)
Q Consensus       162 ~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~  195 (231)
                      ...+..++..||+.+|++||++.++++|.++...
T Consensus       234 ~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~  267 (283)
T cd06617         234 SPEFQDFVNKCLKKNYKERPNYPELLQHPFFELH  267 (283)
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHhcCchhhhc
Confidence            2456789999999999999999999999988664

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.79  E-value=6.4e-20  Score=148.55  Aligned_cols=83  Identities=25%  Similarity=0.221  Sum_probs=66.6

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhC-CCCCCcccHhHHHHHHHHHhCCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTG-RVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      +||||+|+||+++.++.++|+|||++........ ......++..|++||++.+. .++.++|+||+|+++|++++|+.|
T Consensus       121 ~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p  199 (283)
T cd07835         121 LHRDLKPQNLLIDREGALKLADFGLARAFGVPVR-TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPL  199 (283)
T ss_pred             eCCCCCHHHEEEcCCCcEEEeecccccccCCCcc-ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCC
Confidence            5999999999999999999999999876542211 11223557789999987654 468889999999999999999999


Q ss_pred             cccch
Q 045790           85 INRYK   89 (231)
Q Consensus        85 ~~~~~   89 (231)
                      |....
T Consensus       200 f~~~~  204 (283)
T cd07835         200 FPGDS  204 (283)
T ss_pred             CCCCC
Confidence            96543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.79  E-value=2.6e-19  Score=144.89  Aligned_cols=137  Identities=21%  Similarity=0.162  Sum_probs=97.2

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCce-eEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKT-IMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~-~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~   83 (231)
                      .||||||+||+++.++.+||+|||+++.......... ....++..|++||.+....++.++|+||+|++++++++ |..
T Consensus       131 ~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~  210 (279)
T cd05057         131 VHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAK  210 (279)
T ss_pred             EecccCcceEEEcCCCeEEECCCcccccccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCC
Confidence            5999999999999999999999999987643221111 11123457999999877788999999999999999998 999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||......+                                       +...+..    ..       .  ...+.....
T Consensus       211 p~~~~~~~~---------------------------------------~~~~~~~----~~-------~--~~~~~~~~~  238 (279)
T cd05057         211 PYEGIPAVE---------------------------------------IPDLLEK----GE-------R--LPQPPICTI  238 (279)
T ss_pred             CCCCCCHHH---------------------------------------HHHHHhC----CC-------C--CCCCCCCCH
Confidence            986543221                                       1111110    00       0  000111223


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      .+..++.+||..+|++||++.++++.+....
T Consensus       239 ~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~  269 (279)
T cd05057         239 DVYMVLVKCWMIDAESRPTFKELINEFSKMA  269 (279)
T ss_pred             HHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence            5678899999999999999999999988643

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.79  E-value=1.8e-19  Score=145.67  Aligned_cols=137  Identities=20%  Similarity=0.223  Sum_probs=99.7

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .|+||||.||+++.++.++++|||++....... .......++..|++||.+....++.++|+||+|++++++++|..||
T Consensus       123 ~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~  201 (277)
T cd06641         123 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ-IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPH  201 (277)
T ss_pred             ecCCCCHHhEEECCCCCEEEeecccceecccch-hhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCC
Confidence            599999999999999999999999987654321 1123345778899999998777888999999999999999999998


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      .......                                          ...... ..         ............+
T Consensus       202 ~~~~~~~------------------------------------------~~~~~~-~~---------~~~~~~~~~~~~~  229 (277)
T cd06641         202 SELHPMK------------------------------------------VLFLIP-KN---------NPPTLEGNYSKPL  229 (277)
T ss_pred             CccchHH------------------------------------------HHHHHh-cC---------CCCCCCcccCHHH
Confidence            6433110                                          000000 00         0001111223456


Q ss_pred             HHHHHhhcCCCCCCCCCHHHHHHHHhcccC
Q 045790          166 LIVGLWCAHPDRCFRPSIRQAIQVLNFETT  195 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps~~ell~~l~~~~~  195 (231)
                      .+++.+||+.+|++||++.++++|.++...
T Consensus       230 ~~~i~~~l~~~p~~Rp~~~~~l~~~~~~~~  259 (277)
T cd06641         230 KEFVEACLNKEPSFRPTAKELLKHKFIVRF  259 (277)
T ss_pred             HHHHHHHccCChhhCcCHHHHHhCHHHhhh
Confidence            788999999999999999999999887653

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.79  E-value=2.3e-19  Score=144.08  Aligned_cols=127  Identities=18%  Similarity=0.129  Sum_probs=88.9

Q ss_pred             eecCCCCCCeeeCCCCc-------EEEeccccccccCCCCCCceeEeeccccccchhhhhh-CCCCCCcccHhHHHHHHH
Q 045790            6 YSRSPELPPGRGDFNFN-------AKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIST-GRVSKELDVFSFRVVALE   77 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~-------~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~e   77 (231)
                      .||||||+|||++.++.       ++++|||++......     ....++..|+|||.+.. ..++.++||||+|+++|+
T Consensus       127 vH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~e  201 (262)
T cd05077         127 VHGNVCTKNILLAREGIDGECGPFIKLSDPGIPITVLSR-----QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWE  201 (262)
T ss_pred             ECCCCCcccEEEecCCccCCCCceeEeCCCCCCccccCc-----ccccccccccChhhhcCCCCCCchhHHHHHHHHHHH
Confidence            59999999999986553       899999988654321     23456778999999863 558889999999999999


Q ss_pred             HH-hCCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCc
Q 045790           78 IA-TGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSR  156 (231)
Q Consensus        78 l~-~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  156 (231)
                      ++ .|..||......                                       ...    .... ...      .... 
T Consensus       202 l~~~~~~p~~~~~~~---------------------------------------~~~----~~~~-~~~------~~~~-  230 (262)
T cd05077         202 ICYNGEIPLKDKTLA---------------------------------------EKE----RFYE-GQC------MLVT-  230 (262)
T ss_pred             HHhCCCCCCCCcchh---------------------------------------HHH----HHHh-cCc------cCCC-
Confidence            97 577777543211                                       000    0000 000      0000 


Q ss_pred             ccHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHh
Q 045790          157 FDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLN  191 (231)
Q Consensus       157 ~~~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~  191 (231)
                         .....+..++.+||+.||++||++.+|+++++
T Consensus       231 ---~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~~  262 (262)
T cd05077         231 ---PSCKELADLMTHCMNYDPNQRPFFRAIMRDIN  262 (262)
T ss_pred             ---CChHHHHHHHHHHcCCChhhCcCHHHHHHhcC
Confidence               11235678999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.79  E-value=1.9e-19  Score=146.64  Aligned_cols=161  Identities=18%  Similarity=0.060  Sum_probs=98.3

Q ss_pred             eecCCCCCCeeeCC-CCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhC-CCCCCcccHhHHHHHHHHHhCCC
Q 045790            6 YSRSPELPPGRGDF-NFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTG-RVSKELDVFSFRVVALEIATGRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~-~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~el~~g~~   83 (231)
                      .||||||+||+++. ++.+||+|||++........ ......++..|+|||++.+. .++.++|+||+|+++++|++|..
T Consensus       132 ~H~dl~~~nil~~~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~  210 (295)
T cd07837         132 MHRDLKPQNLLVDKQKGLLKIADLGLGRAFSIPVK-SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQP  210 (295)
T ss_pred             eecCCChHHEEEecCCCeEEEeecccceecCCCcc-ccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCC
Confidence            59999999999998 88999999999876532211 11223457789999988653 47889999999999999999999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||...........+...........+.                 .......+...  ....     ...+ .........
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~--~~~~-----~~~~-~~~~~~~~~  265 (295)
T cd07837         211 LFPGDSELQQLLHIFKLLGTPTEQVWP-----------------GVSKLRDWHEF--PQWK-----PQDL-SRAVPDLSP  265 (295)
T ss_pred             CCCCCCHHHHHHHHHHHhCCCChhhCc-----------------chhhccchhhc--Cccc-----chhH-HHhccccCH
Confidence            997654322222111111000000000                 00000000000  0000     0000 000001234


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      .+.+++.+||+.||.+||++.+++.|.++
T Consensus       266 ~~~~~i~~~l~~~P~~R~~~~eil~~~~~  294 (295)
T cd07837         266 EGLDLLQKMLRYDPAKRISAKAALTHPYF  294 (295)
T ss_pred             HHHHHHHHHccCChhhcCCHHHHhcCCCc
Confidence            46789999999999999999999999875

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.79  E-value=2.6e-19  Score=144.97  Aligned_cols=139  Identities=17%  Similarity=0.087  Sum_probs=99.9

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhC-CCCCCcccHhHHHHHHHHHhCCC
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTG-RVSKELDVFSFRVVALEIATGRK   83 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~el~~g~~   83 (231)
                      -.||||||+||+++.++.++|+|||++.......   .....|+..|++||.+..+ .++.++|+||+|++++++++|..
T Consensus       118 i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~  194 (278)
T cd05606         118 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKK---PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHS  194 (278)
T ss_pred             EEcCCCCHHHEEECCCCCEEEccCcCccccCccC---CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCC
Confidence            3599999999999999999999999987543221   1234688899999998654 57889999999999999999999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||......                                       ..... .....      .....    .+.....
T Consensus       195 p~~~~~~~---------------------------------------~~~~~-~~~~~------~~~~~----~~~~~s~  224 (278)
T cd05606         195 PFRQHKTK---------------------------------------DKHEI-DRMTL------TMAVE----LPDSFSP  224 (278)
T ss_pred             CCCCCCcc---------------------------------------chHHH-HHHhh------ccCCC----CCCcCCH
Confidence            99643210                                       00000 00000      00011    1111234


Q ss_pred             HHHHHHHhhcCCCCCCCC-----CHHHHHHHHhcccCC
Q 045790          164 CLLIVGLWCAHPDRCFRP-----SIRQAIQVLNFETTM  196 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rp-----s~~ell~~l~~~~~~  196 (231)
                      .+.+++.+|++.+|.+||     ++.++++|+++....
T Consensus       225 ~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~~~  262 (278)
T cd05606         225 ELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRSLD  262 (278)
T ss_pred             HHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccccCCC
Confidence            677888999999999999     999999999986643

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.79  E-value=1.6e-19  Score=147.44  Aligned_cols=138  Identities=23%  Similarity=0.214  Sum_probs=96.7

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCC----CCCCcccHhHHHHHHHHHhC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGR----VSKELDVFSFRVVALEIATG   81 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~----~~~~~Dv~s~G~vl~el~~g   81 (231)
                      .||||+|+||+++.++.+||+|||++..+.....  .....++..|++||.+....    ++.++|+||+|++++++++|
T Consensus       137 ~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g  214 (296)
T cd06618         137 IHRDVKPSNILLDASGNVKLCDFGISGRLVDSKA--KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATG  214 (296)
T ss_pred             ecCCCcHHHEEEcCCCCEEECccccchhccCCCc--ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhC
Confidence            5999999999999999999999999876542211  12234677899999986443    78899999999999999999


Q ss_pred             CCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHH
Q 045790           82 RKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQ  161 (231)
Q Consensus        82 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  161 (231)
                      +.||......                                         ...+........      +.....  ...
T Consensus       215 ~~p~~~~~~~-----------------------------------------~~~~~~~~~~~~------~~~~~~--~~~  245 (296)
T cd06618         215 QFPYKNCKTE-----------------------------------------FEVLTKILQEEP------PSLPPN--EGF  245 (296)
T ss_pred             CCCCCcchhH-----------------------------------------HHHHHHHhcCCC------CCCCCC--CCC
Confidence            9999642210                                         001111110000      000000  012


Q ss_pred             HHHHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          162 MTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       162 ~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      ...+.+++.+||+.||++||++.++++|.++..
T Consensus       246 ~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~  278 (296)
T cd06618         246 SPDFCSFVDLCLTKDHRKRPKYRELLQHPFIRR  278 (296)
T ss_pred             CHHHHHHHHHHccCChhhCCCHHHHhcChhhhc
Confidence            345688899999999999999999999998754

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.79  E-value=1.9e-19  Score=143.28  Aligned_cols=135  Identities=21%  Similarity=0.178  Sum_probs=99.4

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCc
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      .+|+||+++||+++.++.++|+|||++....... .......|+..|++||.+....++.++|+|++|++++++++|..|
T Consensus       124 ~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~-~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p  202 (258)
T cd08215         124 ILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV-DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHP  202 (258)
T ss_pred             EecccCChHHeEEcCCCcEEECCccceeecccCc-ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCC
Confidence            3599999999999999999999999987654322 223345678889999998888889999999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |...........                                          ... ..     .+.+    +......
T Consensus       203 ~~~~~~~~~~~~------------------------------------------~~~-~~-----~~~~----~~~~~~~  230 (258)
T cd08215         203 FEGENLLELALK------------------------------------------ILK-GQ-----YPPI----PSQYSSE  230 (258)
T ss_pred             CCCCcHHHHHHH------------------------------------------Hhc-CC-----CCCC----CCCCCHH
Confidence            865432211111                                          000 00     0011    1122345


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      +..++.+||+.+|++|||+.++++|+++
T Consensus       231 ~~~~i~~~l~~~p~~Rp~~~~ll~~~~~  258 (258)
T cd08215         231 LRNLVSSLLQKDPEERPSIAQILQSPFI  258 (258)
T ss_pred             HHHHHHHHcCCChhhCcCHHHHhcCCCC
Confidence            6788999999999999999999998763

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.79  E-value=1.3e-19  Score=147.47  Aligned_cols=83  Identities=25%  Similarity=0.195  Sum_probs=66.0

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhh-CCCCCCcccHhHHHHHHHHHhCCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIST-GRVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      +||||||+||+++.++.+||+|||+++....... ......++..|+|||.+.+ ..++.++||||+|++++++++|+.|
T Consensus       125 ~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~  203 (291)
T cd07844         125 LHRDLKPQNLLISERGELKLADFGLARAKSVPSK-TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPL  203 (291)
T ss_pred             ecccCCHHHEEEcCCCCEEECccccccccCCCCc-cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCC
Confidence            6999999999999999999999999865432111 1122345778999999865 3478899999999999999999999


Q ss_pred             cccch
Q 045790           85 INRYK   89 (231)
Q Consensus        85 ~~~~~   89 (231)
                      |....
T Consensus       204 ~~~~~  208 (291)
T cd07844         204 FPGST  208 (291)
T ss_pred             CCCCc
Confidence            96543

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.79  E-value=1.9e-19  Score=143.51  Aligned_cols=132  Identities=18%  Similarity=0.237  Sum_probs=95.3

Q ss_pred             eecCCCCCCeeeCCC-CcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCc
Q 045790            6 YSRSPELPPGRGDFN-FNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      +||||||.||+++.+ +.++|+|||++........  .....++..|++||.+....++.++|+||+|++++++++|..|
T Consensus       123 ~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~  200 (256)
T cd08220         123 LHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSK--AYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRA  200 (256)
T ss_pred             ecCCCCHHHEEEcCCCCEEEEccCCCceecCCCcc--ccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCC
Confidence            699999999999854 5689999999877643221  2234578899999999877788999999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |......                                          ..+.......          ....+......
T Consensus       201 ~~~~~~~------------------------------------------~~~~~~~~~~----------~~~~~~~~~~~  228 (256)
T cd08220         201 FEAANLP------------------------------------------ALVLKIMSGT----------FAPISDRYSPD  228 (256)
T ss_pred             cccCchH------------------------------------------HHHHHHHhcC----------CCCCCCCcCHH
Confidence            8653321                                          0111110000          00011112345


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHh
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLN  191 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~  191 (231)
                      +..++.+||+.+|++|||+.||++|+.
T Consensus       229 l~~li~~~l~~~p~~Rpt~~~ll~~p~  255 (256)
T cd08220         229 LRQLILSMLNLDPSKRPQLSQIMAQPI  255 (256)
T ss_pred             HHHHHHHHccCChhhCCCHHHHhhCCC
Confidence            678999999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.79  E-value=3.1e-19  Score=143.55  Aligned_cols=83  Identities=19%  Similarity=0.182  Sum_probs=62.7

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCC-ceeEeeccccccchhhhhh-------CCCCCCcccHhHHHHHHH
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGP-KTIMLVGTLAYMASEYIST-------GRVSKELDVFSFRVVALE   77 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~-------~~~~~~~Dv~s~G~vl~e   77 (231)
                      .||||||+||+++.++.+||+|||++......... ......++..|+|||++..       ..++.++||||+||++|+
T Consensus       122 vH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~e  201 (269)
T cd05042         122 IHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWE  201 (269)
T ss_pred             ecccccHhheEecCCCcEEEeccccccccccchheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHH
Confidence            59999999999999999999999998653221111 1112234567999999743       346788999999999999


Q ss_pred             HHh-CCCccccc
Q 045790           78 IAT-GRKVINRY   88 (231)
Q Consensus        78 l~~-g~~p~~~~   88 (231)
                      +++ |..||...
T Consensus       202 l~~~~~~p~~~~  213 (269)
T cd05042         202 LFTAADQPYPDL  213 (269)
T ss_pred             HHhCCCCCCCcC
Confidence            998 77888643

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.78  E-value=2.9e-19  Score=145.80  Aligned_cols=141  Identities=21%  Similarity=0.198  Sum_probs=101.3

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      +|+||||+||+++.++.++|+|||++....... .......++..|++||.+....++.++|+||+|++++++++|..||
T Consensus       138 vH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~-~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~  216 (292)
T cd06657         138 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV-PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY  216 (292)
T ss_pred             ecCCCCHHHEEECCCCCEEEcccccceeccccc-ccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence            499999999999999999999999886553221 1123356788999999987777889999999999999999999998


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      .......                                       ........         ..+.+..  .......+
T Consensus       217 ~~~~~~~---------------------------------------~~~~~~~~---------~~~~~~~--~~~~~~~l  246 (292)
T cd06657         217 FNEPPLK---------------------------------------AMKMIRDN---------LPPKLKN--LHKVSPSL  246 (292)
T ss_pred             CCCCHHH---------------------------------------HHHHHHhh---------CCcccCC--cccCCHHH
Confidence            6533210                                       00000000         0000000  00112345


Q ss_pred             HHHHHhhcCCCCCCCCCHHHHHHHHhcccCCC
Q 045790          166 LIVGLWCAHPDRCFRPSIRQAIQVLNFETTMP  197 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~~  197 (231)
                      ..++.+||+.+|.+||++.+|++|.++....+
T Consensus       247 ~~li~~~l~~~P~~R~~~~~ll~~~~~~~~~~  278 (292)
T cd06657         247 KGFLDRLLVRDPAQRATAAELLKHPFLAKAGP  278 (292)
T ss_pred             HHHHHHHHhCCcccCcCHHHHhcChHHhccCC
Confidence            67889999999999999999999999987775

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.78  E-value=4.7e-19  Score=141.44  Aligned_cols=126  Identities=21%  Similarity=0.165  Sum_probs=90.5

Q ss_pred             eecCCCCCCeeeCCCC-------cEEEeccccccccCCCCCCceeEeeccccccchhhhhhC--CCCCCcccHhHHHHHH
Q 045790            6 YSRSPELPPGRGDFNF-------NAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTG--RVSKELDVFSFRVVAL   76 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~-------~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~--~~~~~~Dv~s~G~vl~   76 (231)
                      .||||||+||+++..+       .+||+|||++.....     .....+...|++||++...  .++.++|+||+|+++|
T Consensus       123 ~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~  197 (259)
T cd05037         123 VHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLS-----REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLL  197 (259)
T ss_pred             ecccCccceEEEecCccccCCceeEEeCCCCccccccc-----ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHH
Confidence            6999999999999877       799999999876542     1223456679999998766  6888999999999999


Q ss_pred             HHHh-CCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccC
Q 045790           77 EIAT-GRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDS  155 (231)
Q Consensus        77 el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  155 (231)
                      ++++ |..||......                                       ....+..    ...       ....
T Consensus       198 ~l~~~~~~p~~~~~~~---------------------------------------~~~~~~~----~~~-------~~~~  227 (259)
T cd05037         198 EICSNGEEPLSTLSSS---------------------------------------EKERFYQ----DQH-------RLPM  227 (259)
T ss_pred             HHHhCCCCCcccCCch---------------------------------------hHHHHHh----cCC-------CCCC
Confidence            9999 46666433210                                       0000000    000       0000


Q ss_pred             cccHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHH
Q 045790          156 RFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVL  190 (231)
Q Consensus       156 ~~~~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l  190 (231)
                          .....+.+++.+||+.+|++|||+.+|++.|
T Consensus       228 ----~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l  258 (259)
T cd05037         228 ----PDCAELANLINQCWTYDPTKRPSFRAILRDL  258 (259)
T ss_pred             ----CCchHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence                0015678899999999999999999999876

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.78  E-value=8.3e-19  Score=142.56  Aligned_cols=146  Identities=18%  Similarity=0.092  Sum_probs=100.9

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .|+||++.||+++.++.++|+|||++.......   .....++..|++||.+....++.++|+|++|+++|++++|..||
T Consensus       127 ~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~---~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~  203 (287)
T cd06621         127 IHRDIKPSNILLTRKGQVKLCDFGVSGELVNSL---AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPF  203 (287)
T ss_pred             ccCCCCHHHEEEecCCeEEEeeccccccccccc---cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence            599999999999999999999999986543221   12345677899999998888899999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      ......                                  .....++..+...   .. .. .+.....  ........+
T Consensus       204 ~~~~~~----------------------------------~~~~~~~~~~~~~---~~-~~-~~~~~~~--~~~~~~~~~  242 (287)
T cd06621         204 PPEGEP----------------------------------PLGPIELLSYIVN---MP-NP-ELKDEPG--NGIKWSEEF  242 (287)
T ss_pred             CcccCC----------------------------------CCChHHHHHHHhc---CC-ch-hhccCCC--CCCchHHHH
Confidence            744210                                  0001111122111   00 00 0000000  001123467


Q ss_pred             HHHHHhhcCCCCCCCCCHHHHHHHHhcccC
Q 045790          166 LIVGLWCAHPDRCFRPSIRQAIQVLNFETT  195 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps~~ell~~l~~~~~  195 (231)
                      .+++.+||+.+|++|||+.||+.|.++...
T Consensus       243 ~~li~~~l~~~p~~Rpt~~eil~~~~~~~~  272 (287)
T cd06621         243 KDFIKQCLEKDPTRRPTPWDMLEHPWIKAQ  272 (287)
T ss_pred             HHHHHHHcCCCcccCCCHHHHHhCcccccc
Confidence            889999999999999999999999998543

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.78  E-value=3.8e-19  Score=143.73  Aligned_cols=162  Identities=18%  Similarity=0.062  Sum_probs=100.1

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhC-CCCCCcccHhHHHHHHHHHhCCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTG-RVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      +||||+++||+++.++.++|+|||++........ ......++..|+|||.+... .++.++|+|++|++++++++|..|
T Consensus       120 ~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~  198 (282)
T cd07829         120 LHRDLKPQNILINRDGVLKLADFGLARAFGIPLR-TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPL  198 (282)
T ss_pred             ccCCCChheEEEcCCCCEEEecCCcccccCCCcc-ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCC
Confidence            5999999999999999999999999876543221 12223456789999998766 678899999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |...........+...........+           .......       ...     ...............+ .....
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~-------~~~-----~~~~~~~~~~~~~~~~-~~~~~  254 (282)
T cd07829         199 FPGDSEIDQLFKIFQILGTPTEESW-----------PGVTKLP-------DYK-----PTFPKFPPKDLEKVLP-RLDPE  254 (282)
T ss_pred             CCCccHHHHHHHHHHHhCCCcHHHH-----------Hhhcccc-------ccc-----ccccccCccchHHhcc-cccHH
Confidence            9765433222222111100000000           0000000       000     0000000000000000 11345


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      +.+++..||+.+|++||++.+++.|+++
T Consensus       255 ~~~~i~~~l~~~P~~Rp~~~~~l~~p~~  282 (282)
T cd07829         255 GIDLLSKMLQYNPAKRISAKEALKHPYF  282 (282)
T ss_pred             HHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence            7899999999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.78  E-value=2.9e-19  Score=143.06  Aligned_cols=127  Identities=23%  Similarity=0.235  Sum_probs=89.0

Q ss_pred             eecCCCCCCeeeCCCCc--------EEEeccccccccCCCCCCceeEeeccccccchhhhhhC-CCCCCcccHhHHHHHH
Q 045790            6 YSRSPELPPGRGDFNFN--------AKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTG-RVSKELDVFSFRVVAL   76 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~--------~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~   76 (231)
                      .||||||+||+++.++.        ++++|||++.....     .....++..|++||++.+. .++.++|+||+|+++|
T Consensus       122 iH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~  196 (258)
T cd05078         122 THGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLP-----KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLW  196 (258)
T ss_pred             ecCCCccceEEEecccccccCCCceEEecccccccccCC-----chhccccCCccCchhccCCCCCCchhhHHHHHHHHH
Confidence            59999999999986654        68999998765432     1234567789999998764 4788999999999999


Q ss_pred             HHHhCC-CccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccC
Q 045790           77 EIATGR-KVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDS  155 (231)
Q Consensus        77 el~~g~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  155 (231)
                      ++++|. .|+......                                       ......    ...       ..   
T Consensus       197 ~l~~g~~~~~~~~~~~---------------------------------------~~~~~~----~~~-------~~---  223 (258)
T cd05078         197 EIFSGGDKPLSALDSQ---------------------------------------KKLQFY----EDR-------HQ---  223 (258)
T ss_pred             HHHcCCCCChhhccHH---------------------------------------HHHHHH----Hcc-------cc---
Confidence            999985 555432211                                       000000    000       01   


Q ss_pred             cccHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHh
Q 045790          156 RFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLN  191 (231)
Q Consensus       156 ~~~~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~  191 (231)
                       .+......+.+++.+||+.||++|||++++++.|+
T Consensus       224 -~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~  258 (258)
T cd05078         224 -LPAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN  258 (258)
T ss_pred             -CCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence             11111245788999999999999999999999873

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.78  E-value=2e-19  Score=146.52  Aligned_cols=165  Identities=18%  Similarity=0.066  Sum_probs=99.9

Q ss_pred             eeecCCCCCCeeeCC-CCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhC-CCCCCcccHhHHHHHHHHHhCC
Q 045790            5 AYSRSPELPPGRGDF-NFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTG-RVSKELDVFSFRVVALEIATGR   82 (231)
Q Consensus         5 ~~~rdlk~~nil~~~-~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~el~~g~   82 (231)
                      ..||||||+||+++. ++.+||+|||++....... .......++..|++||.+.+. .++.++|+||+|++++++++|.
T Consensus       123 i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~  201 (294)
T PLN00009        123 VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPV-RTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQK  201 (294)
T ss_pred             eeCCCCCcceEEEECCCCEEEEcccccccccCCCc-cccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence            369999999999985 5679999999987654321 111234567789999998654 4788999999999999999999


Q ss_pred             CccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           83 KVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        83 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      .||......+....+...........+           .      ....+..+.....   ..   ....+. .......
T Consensus       202 ~pf~~~~~~~~~~~~~~~~~~~~~~~~-----------~------~~~~~~~~~~~~~---~~---~~~~~~-~~~~~~~  257 (294)
T PLN00009        202 PLFPGDSEIDELFKIFRILGTPNEETW-----------P------GVTSLPDYKSAFP---KW---PPKDLA-TVVPTLE  257 (294)
T ss_pred             CCCCCCCHHHHHHHHHHHhCCCChhhc-----------c------ccccchhhhhhcc---cC---CCCCHH-HhCcCCC
Confidence            999754432222211111100000000           0      0000111100000   00   000000 0000112


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      ..+.+++.+|++.+|++||++.++++|.++..
T Consensus       258 ~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~  289 (294)
T PLN00009        258 PAGVDLLSKMLRLDPSKRITARAALEHEYFKD  289 (294)
T ss_pred             hHHHHHHHHHccCChhhCcCHHHHhcCchHhH
Confidence            34678999999999999999999999998754

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.78  E-value=1.4e-19  Score=146.61  Aligned_cols=162  Identities=17%  Similarity=0.104  Sum_probs=100.2

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhC-CCCCCcccHhHHHHHHHHHhCCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTG-RVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      .||||||+||+++.++.++|+|||++........ ......++..|++||.+.+. .++.++|+|++|++++++++|+.|
T Consensus       122 ~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~  200 (284)
T cd07836         122 LHRDLKPQNLLINKRGELKLADFGLARAFGIPVN-TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPL  200 (284)
T ss_pred             eeCCCCHHHEEECCCCcEEEeecchhhhhcCCcc-ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence            5999999999999999999999999876532211 11234567789999998654 468889999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |......+....+...........+..+.                 ....+..      ......+... ..........
T Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~------~~~~~~~~~~-~~~~~~~~~~  256 (284)
T cd07836         201 FPGTNNEDQLLKIFRIMGTPTESTWPGIS-----------------QLPEYKP------TFPRYPPQDL-QQLFPHADPL  256 (284)
T ss_pred             CCCCCcHHHHHHHHHHhCCCChhhHHHHh-----------------cCchhcc------cccCCChHHH-HHHhhhcCcH
Confidence            97655433323222211111100000000                 0000000      0000000000 0000112345


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      +.+++.+|++.||++||++.++++|.+|
T Consensus       257 ~~~~i~~~l~~~p~~R~~~~~~l~~~~f  284 (284)
T cd07836         257 GIDLLHRLLQLNPELRISAHDALQHPWF  284 (284)
T ss_pred             HHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence            6789999999999999999999998765

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.78  E-value=4.8e-19  Score=143.30  Aligned_cols=139  Identities=16%  Similarity=0.152  Sum_probs=97.8

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhh-----CCCCCCcccHhHHHHHHHHHh
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIST-----GRVSKELDVFSFRVVALEIAT   80 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-----~~~~~~~Dv~s~G~vl~el~~   80 (231)
                      .||||||+||+++.++.++|+|||++....... .......++..|++||.+..     ..++.++|+||+|+++|++++
T Consensus       125 ~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~  203 (280)
T cd06611         125 IHRDLKAGNILLTLDGDVKLADFGVSAKNKSTL-QKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQ  203 (280)
T ss_pred             ccCCCChhhEEECCCCCEEEccCccchhhcccc-cccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHh
Confidence            599999999999999999999999876543221 12234567889999999752     346778999999999999999


Q ss_pred             CCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHH
Q 045790           81 GRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQ  160 (231)
Q Consensus        81 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  160 (231)
                      |+.||...........+                                          ....      .+.+  ..+..
T Consensus       204 g~~p~~~~~~~~~~~~~------------------------------------------~~~~------~~~~--~~~~~  233 (280)
T cd06611         204 MEPPHHELNPMRVLLKI------------------------------------------LKSE------PPTL--DQPSK  233 (280)
T ss_pred             CCCCcccCCHHHHHHHH------------------------------------------hcCC------CCCc--CCccc
Confidence            99999654321100000                                          0000      0000  00011


Q ss_pred             HHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccC
Q 045790          161 QMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETT  195 (231)
Q Consensus       161 ~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~  195 (231)
                      ....+.+++..||+.+|++||++.++++|.++...
T Consensus       234 ~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~  268 (280)
T cd06611         234 WSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSDQ  268 (280)
T ss_pred             CCHHHHHHHHHHhccChhhCcCHHHHhcChhhccc
Confidence            12346778999999999999999999999987654

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=99.78  E-value=1.2e-19  Score=143.61  Aligned_cols=166  Identities=15%  Similarity=0.051  Sum_probs=109.6

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+||++.....+||.|||+++.....  -.....+.+..|.|||++.+.++...+||||.||++.||+.|...|
T Consensus       140 ihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~--~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf  217 (369)
T KOG0665|consen  140 IHRDLKPSNIVVNSDCTLKILDFGLARTEDTD--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLF  217 (369)
T ss_pred             eecccCcccceecchhheeeccchhhcccCcc--cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEe
Confidence            49999999999999999999999999765432  2234456788999999998888999999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhc-chhh-----hhh-cccccC--c
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGE-RKLL-----SAA-NERLDS--R  156 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-----~~~-~~~l~~--~  156 (231)
                      .+.+.-+...++..-+.......+..                    +..-+...... +..+     ..+ |-....  .
T Consensus       218 ~g~d~idQ~~ki~~~lgtpd~~F~~q--------------------L~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e  277 (369)
T KOG0665|consen  218 PGKDHIDQWNKIIEQLGTPDPSFMKQ--------------------LQPTVRNYVENRPQYQAISFSELFPDSLFPVVLE  277 (369)
T ss_pred             cCchHHHHHHHHHHHhcCCCHHHHHH--------------------hhHHHHHHhhcChHhhccchhhhCCccccccccc
Confidence            87765555444444333222211111                    11111111100 0000     000 000000  0


Q ss_pred             ccHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcc
Q 045790          157 FDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFE  193 (231)
Q Consensus       157 ~~~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~  193 (231)
                      .+.......-.++.+||..+|++|.+++++|+|++..
T Consensus       278 ~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~  314 (369)
T KOG0665|consen  278 GSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIK  314 (369)
T ss_pred             CCccchHHHHHHHHHhhccChhhcccHHHHhcCCeee
Confidence            1112233345578899999999999999999999985

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.78  E-value=3.6e-19  Score=145.25  Aligned_cols=141  Identities=19%  Similarity=0.187  Sum_probs=100.4

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .|||||++||+++.++.++|+|||++........ ......++..|++||.+....++.++|+||+|+++|++++|+.||
T Consensus       137 ~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf  215 (293)
T cd06647         137 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPY  215 (293)
T ss_pred             eeccCCHHHEEEcCCCCEEEccCcceeccccccc-ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence            5999999999999999999999998865543221 122345778899999987777889999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      ...........+                                          .....      +..  .........+
T Consensus       216 ~~~~~~~~~~~~------------------------------------------~~~~~------~~~--~~~~~~~~~l  245 (293)
T cd06647         216 LNENPLRALYLI------------------------------------------ATNGT------PEL--QNPEKLSAIF  245 (293)
T ss_pred             CCCChhhheeeh------------------------------------------hcCCC------CCC--CCccccCHHH
Confidence            654321000000                                          00000      000  0001112346


Q ss_pred             HHHHHhhcCCCCCCCCCHHHHHHHHhcccCCC
Q 045790          166 LIVGLWCAHPDRCFRPSIRQAIQVLNFETTMP  197 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~~  197 (231)
                      .+++.+||+.+|++||++.+++.|.++....+
T Consensus       246 ~~li~~~l~~~p~~Rp~~~~il~h~~~~~~~~  277 (293)
T cd06647         246 RDFLNRCLEMDVEKRGSAKELLQHPFLKIAKP  277 (293)
T ss_pred             HHHHHHHccCChhhCcCHHHHhcCHHHhcCcc
Confidence            67899999999999999999999999876553

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.78  E-value=5.5e-19  Score=143.44  Aligned_cols=138  Identities=22%  Similarity=0.214  Sum_probs=98.8

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .|+||||+||+++.++.++|+|||++........ ......++..|++||.+.+..++.++|+||+|++++++++|+.||
T Consensus       138 ~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~  216 (286)
T cd06614         138 IHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKS-KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPY  216 (286)
T ss_pred             eeCCCChhhEEEcCCCCEEECccchhhhhccchh-hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCC
Confidence            5999999999999999999999998765432211 122345677899999988777899999999999999999999998


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      .......                                         ... .... ...     +....  .......+
T Consensus       217 ~~~~~~~-----------------------------------------~~~-~~~~-~~~-----~~~~~--~~~~~~~l  246 (286)
T cd06614         217 LREPPLR-----------------------------------------ALF-LITT-KGI-----PPLKN--PEKWSPEF  246 (286)
T ss_pred             CCCCHHH-----------------------------------------HHH-HHHh-cCC-----CCCcc--hhhCCHHH
Confidence            6433210                                         000 0000 000     00000  00122456


Q ss_pred             HHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          166 LIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      .+++.+||+.+|.+||++.+++++.++..
T Consensus       247 ~~li~~~l~~~p~~Rpt~~~il~~~~~~~  275 (286)
T cd06614         247 KDFLNKCLVKDPEKRPSAEELLQHPFLKK  275 (286)
T ss_pred             HHHHHHHhccChhhCcCHHHHhhChHhhc
Confidence            78999999999999999999999998866

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.78  E-value=7.1e-19  Score=146.80  Aligned_cols=165  Identities=17%  Similarity=0.091  Sum_probs=102.4

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhh-CCCCCCcccHhHHHHHHHHHhCCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIST-GRVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      .||||||+||+++.++.+||+|||++......    .....++..|+|||.+.+ ..++.++|+||+|++++++++|+.|
T Consensus       142 vH~dlkp~NIll~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~p  217 (345)
T cd07877         142 IHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL  217 (345)
T ss_pred             eecCCChHHEEEcCCCCEEEeccccccccccc----ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCC
Confidence            59999999999999999999999998764321    123456788999999866 4578899999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |...........+..............+               .......+.....      ......+.. ........
T Consensus       218 f~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~------~~~~~~~~~-~~~~~~~~  275 (345)
T cd07877         218 FPGTDHIDQLKLILRLVGTPGAELLKKI---------------SSESARNYIQSLT------QMPKMNFAN-VFIGANPL  275 (345)
T ss_pred             CCCCCHHHHHHHHHHHhCCCCHHHHhhc---------------ccHhHHHHHHHhc------ccCCcchhh-hcCCCCHH
Confidence            9654432222222111111110000000               0000000000000      000000000 00011235


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                      +.+++.+|++.||++||++.++++|.++..-.
T Consensus       276 ~~~li~~~L~~dp~~R~t~~e~l~h~~f~~~~  307 (345)
T cd07877         276 AVDLLEKMLVLDSDKRITAAQALAHAYFAQYH  307 (345)
T ss_pred             HHHHHHHHcCCChhhcCCHHHHhcChhhhhcC
Confidence            67899999999999999999999999987533

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.78  E-value=4.1e-19  Score=143.75  Aligned_cols=158  Identities=18%  Similarity=0.070  Sum_probs=99.4

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhh-CCCCCCcccHhHHHHHHHHHhCCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIST-GRVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      .|+|||+.||+++.++.++|+|||++........  .....++..|+|||.+.. ..++.++|+||+|++++++++|+.|
T Consensus       121 ~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~  198 (283)
T cd07830         121 FHRDLKPENLLVSGPEVVKIADFGLAREIRSRPP--YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPL  198 (283)
T ss_pred             ccCCCChhhEEEcCCCCEEEeecccceeccCCCC--cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCc
Confidence            5999999999999999999999999876543211  223456778999998754 4478899999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhh----cccccCcccHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAA----NERLDSRFDEQ  160 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~l~~~~~~~  160 (231)
                      |......+....+..........                          .|.............+    ...+.. ....
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  251 (283)
T cd07830         199 FPGSSEIDQLYKICSVLGTPTKQ--------------------------DWPEGYKLASKLGFRFPQFAPTSLHQ-LIPN  251 (283)
T ss_pred             cCCCChHHHHHHHHHhcCCCChh--------------------------hhhhHhhhhccccccccccccccHHH-Hccc
Confidence            97654322221111110000000                          0100000000000000    000000 0001


Q ss_pred             HHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          161 QMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       161 ~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      ....+..++.+||+.+|++|||+.|++.|+++
T Consensus       252 ~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~~  283 (283)
T cd07830         252 ASPEAIDLIKDMLRWDPKKRPTASQALQHPYF  283 (283)
T ss_pred             CCHHHHHHHHHhcccCcccCCCHHHHhhCCCC
Confidence            13567899999999999999999999998764

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.78  E-value=3e-19  Score=142.43  Aligned_cols=134  Identities=20%  Similarity=0.156  Sum_probs=96.4

Q ss_pred             eecCCCCCCeeeCCCC-cEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCc
Q 045790            6 YSRSPELPPGRGDFNF-NAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~-~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      +|+||||+||+++.++ .++++|||.+........ ......|+..|+|||++....++.++|+||+|++++++++|..|
T Consensus       123 ~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p  201 (257)
T cd08225         123 LHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSME-LAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHP  201 (257)
T ss_pred             ccccCCHHHEEEcCCCCeEEecccccchhccCCcc-cccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence            5999999999999875 579999999876543221 12234578899999998777889999999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |......                                          .+..+.....     ..+     ........
T Consensus       202 ~~~~~~~------------------------------------------~~~~~~~~~~-----~~~-----~~~~~~~~  229 (257)
T cd08225         202 FEGNNLH------------------------------------------QLVLKICQGY-----FAP-----ISPNFSRD  229 (257)
T ss_pred             CCCccHH------------------------------------------HHHHHHhccc-----CCC-----CCCCCCHH
Confidence            8643211                                          1111111000     000     00111235


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      +.+++.+||+.+|++|||+.+|++|+++
T Consensus       230 ~~~~i~~~l~~~p~~Rpt~~~ll~~~~~  257 (257)
T cd08225         230 LRSLISQLFKVSPRDRPSITSILKRPFL  257 (257)
T ss_pred             HHHHHHHHhccChhhCcCHHHHhhCCCC
Confidence            7788999999999999999999998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.78  E-value=1.4e-18  Score=139.91  Aligned_cols=138  Identities=13%  Similarity=0.125  Sum_probs=89.7

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCC-CceeEeeccccccchhhhhh-------CCCCCCcccHhHHHHHHH
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELG-PKTIMLVGTLAYMASEYIST-------GRVSKELDVFSFRVVALE   77 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~-------~~~~~~~Dv~s~G~vl~e   77 (231)
                      .||||||+|||++.++.++|+|||++........ .......++..|++||++..       ..++.++||||+|+++|+
T Consensus       121 ~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~e  200 (268)
T cd05086         121 LHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWE  200 (268)
T ss_pred             eccCCccceEEEcCCccEEecccccccccCcchhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHH
Confidence            5999999999999999999999998754321111 11123456778999998742       235678999999999999


Q ss_pred             HHh-CCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCc
Q 045790           78 IAT-GRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSR  156 (231)
Q Consensus        78 l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  156 (231)
                      +++ +..||......                                          ........ .......++.+...
T Consensus       201 l~~~~~~p~~~~~~~------------------------------------------~~~~~~~~-~~~~~~~~~~~~~~  237 (268)
T cd05086         201 LFENAAQPYSHLSDR------------------------------------------EVLNHVIK-DQQVKLFKPQLELP  237 (268)
T ss_pred             HHhCCCCCCCCCCHH------------------------------------------HHHHHHHh-hcccccCCCccCCC
Confidence            987 56677543211                                          11111111 11111222222222


Q ss_pred             ccHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHh
Q 045790          157 FDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLN  191 (231)
Q Consensus       157 ~~~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~  191 (231)
                      +    ...+.+++..|| .+|++||++.+|++.|.
T Consensus       238 ~----~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~  267 (268)
T cd05086         238 Y----SERWYEVLQFCW-LSPEKRATAEEVHRLLT  267 (268)
T ss_pred             C----cHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence            2    234566778899 57999999999998874

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.78  E-value=5.1e-19  Score=141.55  Aligned_cols=138  Identities=20%  Similarity=0.218  Sum_probs=100.6

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      +||||+|+||+++.++.++|+|||++........ ......++..|++||.+....++.++|+|++|++++++++|..||
T Consensus       122 ~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~-~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~  200 (264)
T cd06623         122 IHRDIKPSNLLINSKGEVKIADFGISKVLENTLD-QCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPF  200 (264)
T ss_pred             ccCCCCHHHEEECCCCCEEEccCccceecccCCC-cccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence            5999999999999999999999999876643222 122456788899999998878889999999999999999999998


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHH-HHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQ-QMTC  164 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~  164 (231)
                      .....                                       ..............      .+.    .+.. ....
T Consensus       201 ~~~~~---------------------------------------~~~~~~~~~~~~~~------~~~----~~~~~~~~~  231 (264)
T cd06623         201 LPPGQ---------------------------------------PSFFELMQAICDGP------PPS----LPAEEFSPE  231 (264)
T ss_pred             ccccc---------------------------------------cCHHHHHHHHhcCC------CCC----CCcccCCHH
Confidence            65421                                       01111111111000      011    1111 3356


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhcc
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNFE  193 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~~  193 (231)
                      +..++..||+.+|++||++.++++|.+..
T Consensus       232 l~~li~~~l~~~p~~R~~~~~ll~~~~~~  260 (264)
T cd06623         232 FRDFISACLQKDPKKRPSAAELLQHPFIK  260 (264)
T ss_pred             HHHHHHHHccCChhhCCCHHHHHhCHHHH
Confidence            78889999999999999999999998764

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.78  E-value=5.7e-19  Score=145.41  Aligned_cols=134  Identities=19%  Similarity=0.143  Sum_probs=96.0

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhh---hCCCCCCcccHhHHHHHHHHHhCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIS---TGRVSKELDVFSFRVVALEIATGR   82 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~s~G~vl~el~~g~   82 (231)
                      .||||||+||+++.++.++|+|||++.....     .....|+..|++||.+.   ...++.++|+||+|++++++++|.
T Consensus       143 ~H~dl~p~nili~~~~~~kL~dfg~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~  217 (313)
T cd06633         143 IHRDIKAGNILLTEPGQVKLADFGSASKSSP-----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERK  217 (313)
T ss_pred             ecCCCChhhEEECCCCCEEEeecCCCcccCC-----CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCC
Confidence            5999999999999999999999998754321     12346778899999974   345788999999999999999999


Q ss_pred             CccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           83 KVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        83 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      .||..........                                          ...... .     +..   ......
T Consensus       218 ~p~~~~~~~~~~~------------------------------------------~~~~~~-~-----~~~---~~~~~~  246 (313)
T cd06633         218 PPLFNMNAMSALY------------------------------------------HIAQND-S-----PTL---QSNEWT  246 (313)
T ss_pred             CCCCCCChHHHHH------------------------------------------HHHhcC-C-----CCC---CccccC
Confidence            9986543211000                                          000000 0     000   000111


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccC
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETT  195 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~  195 (231)
                      ..+.+++.+||+.+|++||++.++++|.++...
T Consensus       247 ~~l~~li~~~l~~~P~~Rp~~~~~l~~~~~~~~  279 (313)
T cd06633         247 DSFRGFVDYCLQKIPQERPASAELLRHDFVRRD  279 (313)
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHhcCcccCCC
Confidence            346778999999999999999999999888653

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.77  E-value=6.9e-20  Score=142.56  Aligned_cols=183  Identities=16%  Similarity=0.055  Sum_probs=114.9

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCC-CCCCcccHhHHHHHHHHHhCCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGR-VSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~-~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      .||||||-|.|+++|..+||+|||+++.........-...+.|..|+|||++.+.. |+.+.||||.||++.|++.++..
T Consensus       178 LHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrIL  257 (449)
T KOG0664|consen  178 LHRDIKPGNLLVNSNCILKICDFGLARTWDQRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKIL  257 (449)
T ss_pred             hhccCCCccEEeccCceEEecccccccccchhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhh
Confidence            49999999999999999999999999876533222223345678999999998865 99999999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCc-cccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTG-SVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      |....+-+.+..|...+..+..+ +.......+.-...++..                    ...+.--+.-..+...-.
T Consensus       258 FQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k--------------------~Ps~~vLYtlsS~~~~~h  317 (449)
T KOG0664|consen  258 FQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLR--------------------APDTQRLYKIASPDDKNH  317 (449)
T ss_pred             hhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCC--------------------CCCccceeeecCCcccch
Confidence            98877665555555444333221 111111100000000000                    000000000011112223


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCCCCCCCCCCCCcc
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTMPNLPSKMHVPSY  208 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~~~~~~~~~~~~~  208 (231)
                      ..+.+...++..||++|.+..+.+.|++....-.--..+++...+
T Consensus       318 eav~~~~~~l~~d~dkris~~~A~~~~~~~e~R~r~~sCmC~~~~  362 (449)
T KOG0664|consen  318 EAVDLLQKLLHFDPDKRISVEEALQHRYLEEGRLRFHSCMCSCCY  362 (449)
T ss_pred             HHHHHHHHHhCCCCcccccHhhhcccccccccceeeeeeeEeeec
Confidence            345566778899999999999999999875544444444443333

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.77  E-value=4e-19  Score=142.00  Aligned_cols=137  Identities=20%  Similarity=0.148  Sum_probs=99.3

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCC-------CceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHH
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELG-------PKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALE   77 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~-------~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~e   77 (231)
                      -+||||+++||+++.++.++|+|||++........       .......++..|++||.+.....+.++|+||+|+++++
T Consensus       114 i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~  193 (265)
T cd05579         114 IIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYE  193 (265)
T ss_pred             eecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHH
Confidence            36999999999999999999999999865432211       01223456778999999977778889999999999999


Q ss_pred             HHhCCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcc
Q 045790           78 IATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRF  157 (231)
Q Consensus        78 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  157 (231)
                      +++|..||........                                          ...... .        ..  ..
T Consensus       194 l~~g~~p~~~~~~~~~------------------------------------------~~~~~~-~--------~~--~~  220 (265)
T cd05579         194 FLVGIPPFHGETPEEI------------------------------------------FQNILN-G--------KI--EW  220 (265)
T ss_pred             HHhCCCCCCCCCHHHH------------------------------------------HHHHhc-C--------Cc--CC
Confidence            9999999964432211                                          111000 0        00  00


Q ss_pred             cHH--HHHHHHHHHHhhcCCCCCCCCCH---HHHHHHHhccc
Q 045790          158 DEQ--QMTCLLIVGLWCAHPDRCFRPSI---RQAIQVLNFET  194 (231)
Q Consensus       158 ~~~--~~~~~~~l~~~c~~~dp~~Rps~---~ell~~l~~~~  194 (231)
                      +..  ....+..++.+||+.+|.+|||+   .++++|.++..
T Consensus       221 ~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~~~  262 (265)
T cd05579         221 PEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFKG  262 (265)
T ss_pred             CccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCccccC
Confidence            001  13556889999999999999999   99999988864

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.77  E-value=4e-19  Score=144.61  Aligned_cols=135  Identities=19%  Similarity=0.115  Sum_probs=99.8

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCc
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      -+||||+|.||+++.++.+||+|||++......    .....++..|++||.+.+...+.++|+||+|++++++++|..|
T Consensus       122 i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p  197 (290)
T cd05580         122 IVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR----TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPP  197 (290)
T ss_pred             EecCCCCHHHEEECCCCCEEEeeCCCccccCCC----CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCC
Confidence            369999999999999999999999998776432    2234578899999999777788999999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |...........+                                          . ...      ..+..    .....
T Consensus       198 ~~~~~~~~~~~~~------------------------------------------~-~~~------~~~~~----~~~~~  224 (290)
T cd05580         198 FFDDNPIQIYEKI------------------------------------------L-EGK------VRFPS----FFSPD  224 (290)
T ss_pred             CCCCCHHHHHHHH------------------------------------------h-cCC------ccCCc----cCCHH
Confidence            8643311000000                                          0 000      01111    11245


Q ss_pred             HHHHHHhhcCCCCCCCC-----CHHHHHHHHhcccCC
Q 045790          165 LLIVGLWCAHPDRCFRP-----SIRQAIQVLNFETTM  196 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rp-----s~~ell~~l~~~~~~  196 (231)
                      +..++.+||+.+|.+|+     ++.++++|+++....
T Consensus       225 l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~  261 (290)
T cd05580         225 AKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAGID  261 (290)
T ss_pred             HHHHHHHHccCCHHHccCcccCCHHHHHcCcccccCC
Confidence            56788999999999999     999999999875533

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.77  E-value=8.1e-19  Score=128.97  Aligned_cols=166  Identities=18%  Similarity=0.109  Sum_probs=113.0

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCC-CCCCcccHhHHHHHHHHHh-CC
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGR-VSKELDVFSFRVVALEIAT-GR   82 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~-~~~~~Dv~s~G~vl~el~~-g~   82 (231)
                      ..|||+||+|.||+.||.+|++|||+++.++... .+....+.|.+|++|+++.+.. |+...|+||.||++.|+.. |.
T Consensus       122 vlhrdlkpqnllin~ngelkladfglarafgipv-rcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagr  200 (292)
T KOG0662|consen  122 VLHRDLKPQNLLINRNGELKLADFGLARAFGIPV-RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGR  200 (292)
T ss_pred             hhhccCCcceEEeccCCcEEecccchhhhcCCce-EeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCC
Confidence            4699999999999999999999999999886432 2223446688999999998866 8999999999999999985 77


Q ss_pred             CccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           83 KVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        83 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      +.|.+.+-.+.+.++.........+.+..+-.     .++-...........|..-+           |++..       
T Consensus       201 plfpg~dvddqlkrif~~lg~p~ed~wps~t~-----lpdyk~yp~ypattswsqiv-----------p~lns-------  257 (292)
T KOG0662|consen  201 PLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTK-----LPDYKPYPIYPATTSWSQIV-----------PKLNS-------  257 (292)
T ss_pred             CCCCCCcHHHHHHHHHHHhCCCccccCCcccc-----CCCCcccCCccccchHHHHh-----------hhhcc-------
Confidence            77887777777777766555444443322211     11111122333444554322           22211       


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccC
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETT  195 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~  195 (231)
                       .-.+++..-+..+|.+|.++..+++|++|...
T Consensus       258 -~grdllqkll~cnp~qrisaeaalqhpyf~d~  289 (292)
T KOG0662|consen  258 -TGRDLLQKLLKCNPAQRISAEAALQHPYFSDF  289 (292)
T ss_pred             -hhHHHHHHHhccCcccccCHHHHhcCcccccc
Confidence             11223333444599999999999999998653

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.77  E-value=6.5e-19  Score=143.94  Aligned_cols=84  Identities=26%  Similarity=0.238  Sum_probs=67.0

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhC-CCCCCcccHhHHHHHHHHHhCCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTG-RVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      +|||||++||+++.++.+||+|||++...............++..|++||.+.+. .++.++||||+|++++++++|+.|
T Consensus       138 ~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~  217 (302)
T cd07864         138 LHRDIKCSNILLNNKGQIKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPI  217 (302)
T ss_pred             ecCCCCHHHEEECCCCcEEeCcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCC
Confidence            6999999999999999999999999876543222112223456789999988543 468899999999999999999999


Q ss_pred             cccch
Q 045790           85 INRYK   89 (231)
Q Consensus        85 ~~~~~   89 (231)
                      |....
T Consensus       218 ~~~~~  222 (302)
T cd07864         218 FQANQ  222 (302)
T ss_pred             CCCCC
Confidence            97543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.77  E-value=4.1e-19  Score=143.59  Aligned_cols=139  Identities=17%  Similarity=0.081  Sum_probs=99.0

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCc
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      ..|||||++||+++.++.++|+|||.+......  .......++..|++||.+.+..++.++|+||+|++++++++|+.|
T Consensus       116 i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p  193 (277)
T cd05577         116 IVYRDLKPENVLLDDHGNVRISDLGLAVELKGG--KKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSP  193 (277)
T ss_pred             cccCCCCHHHEEECCCCCEEEccCcchhhhccC--CccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCC
Confidence            359999999999999999999999998765421  122334567789999999877788999999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |......                                      ... ..+.+..        .  ......+......
T Consensus       194 ~~~~~~~--------------------------------------~~~-~~~~~~~--------~--~~~~~~~~~~~~~  224 (277)
T cd05577         194 FRQRKEK--------------------------------------VEK-EELKRRT--------L--EMAVEYPDKFSPE  224 (277)
T ss_pred             CCCCccc--------------------------------------ccH-HHHHhcc--------c--cccccCCccCCHH
Confidence            9643310                                      000 0000000        0  0000111112345


Q ss_pred             HHHHHHhhcCCCCCCCC-----CHHHHHHHHhccc
Q 045790          165 LLIVGLWCAHPDRCFRP-----SIRQAIQVLNFET  194 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rp-----s~~ell~~l~~~~  194 (231)
                      +.+++.+||+.+|++||     ++.++++|+++..
T Consensus       225 ~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~  259 (277)
T cd05577         225 AKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKD  259 (277)
T ss_pred             HHHHHHHHccCChhHccCCCcccHHHHHhChhhhc
Confidence            67889999999999999     8888999998853

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.77  E-value=5e-19  Score=141.62  Aligned_cols=136  Identities=20%  Similarity=0.079  Sum_probs=97.6

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCc
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      -+||||+|+||+++.++.++|+|||++.....     .....++..|++||.+.+..++.++|+||+|++++++++|..|
T Consensus       118 i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~-----~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p  192 (260)
T cd05611         118 IIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE-----NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPP  192 (260)
T ss_pred             eecCCCCHHHeEECCCCcEEEeecccceeccc-----cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCC
Confidence            36999999999999999999999998865432     1234567789999999877788999999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |...........+                                          . ...      ..............
T Consensus       193 ~~~~~~~~~~~~~------------------------------------------~-~~~------~~~~~~~~~~~~~~  223 (260)
T cd05611         193 FHAETPDAVFDNI------------------------------------------L-SRR------INWPEEVKEFCSPE  223 (260)
T ss_pred             CCCCCHHHHHHHH------------------------------------------H-hcc------cCCCCcccccCCHH
Confidence            9643321110000                                          0 000      00000111122355


Q ss_pred             HHHHHHhhcCCCCCCCCCH---HHHHHHHhccc
Q 045790          165 LLIVGLWCAHPDRCFRPSI---RQAIQVLNFET  194 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~---~ell~~l~~~~  194 (231)
                      +.+++.+||+.+|++||++   .|++.|+++..
T Consensus       224 ~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~~~  256 (260)
T cd05611         224 AVDLINRLLCMDPAKRLGANGYQEIKSHPFFKS  256 (260)
T ss_pred             HHHHHHHHccCCHHHccCCCcHHHHHcChHhhc
Confidence            7889999999999999955   68888888754

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.77  E-value=7.8e-19  Score=148.57  Aligned_cols=142  Identities=20%  Similarity=0.196  Sum_probs=103.2

Q ss_pred             ecCCCCCCeeeCCCCcEEEeccccccccCCCCCCce-eEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh--CCC
Q 045790            7 SRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKT-IMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT--GRK   83 (231)
Q Consensus         7 ~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~-~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~--g~~   83 (231)
                      |||+.++|+|+|+++.+||+|||+++-+-.+..... ...+-...|||+|.+.-+.++.++|+|+||+++||+++  ...
T Consensus       660 Hrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~  739 (807)
T KOG1094|consen  660 HRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQ  739 (807)
T ss_pred             hccccccceeecCcccEEecCcccccccccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhC
Confidence            999999999999999999999999986654444332 33455679999999999999999999999999999875  678


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||.....++                                       +++-........      ....-...+.-+..
T Consensus       740 Py~~lt~e~---------------------------------------vven~~~~~~~~------~~~~~l~~P~~cp~  774 (807)
T KOG1094|consen  740 PYSQLTDEQ---------------------------------------VVENAGEFFRDQ------GRQVVLSRPPACPQ  774 (807)
T ss_pred             chhhhhHHH---------------------------------------HHHhhhhhcCCC------CcceeccCCCcCcH
Confidence            886544221                                       111111111000      01111122233456


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhcc
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNFE  193 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~~  193 (231)
                      .+.++|++||..|.++|||+.+|..+|...
T Consensus       775 ~lyelml~Cw~~es~~RPsFe~lh~~lq~~  804 (807)
T KOG1094|consen  775 GLYELMLRCWRRESEQRPSFEQLHLFLQED  804 (807)
T ss_pred             HHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence            778999999999999999999999998754

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.77  E-value=9.2e-19  Score=143.55  Aligned_cols=139  Identities=16%  Similarity=0.029  Sum_probs=96.5

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCC--------------ceeEeeccccccchhhhhhCCCCCCcccHhH
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGP--------------KTIMLVGTLAYMASEYISTGRVSKELDVFSF   71 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~--------------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~   71 (231)
                      .||||||.||+++.++.++++|||+++........              ......++..|++||.+.+..++.++|+||+
T Consensus       123 ~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl  202 (305)
T cd05609         123 VHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAM  202 (305)
T ss_pred             cccCCchHHEEECCCCCEEEeeCCCccccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHH
Confidence            59999999999999999999999988642110000              0112356778999999887788999999999


Q ss_pred             HHHHHHHHhCCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcc
Q 045790           72 RVVALEIATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANE  151 (231)
Q Consensus        72 G~vl~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (231)
                      |++++++++|..||.......                                          +........    ...+
T Consensus       203 G~vl~el~~g~~pf~~~~~~~------------------------------------------~~~~~~~~~----~~~~  236 (305)
T cd05609         203 GIILYEFLVGCVPFFGDTPEE------------------------------------------LFGQVISDD----IEWP  236 (305)
T ss_pred             HHHHHHHHhCCCCCCCCCHHH------------------------------------------HHHHHHhcc----cCCC
Confidence            999999999999996433211                                          111110000    0000


Q ss_pred             cccCcccHHHHHHHHHHHHhhcCCCCCCCCC---HHHHHHHHhccc
Q 045790          152 RLDSRFDEQQMTCLLIVGLWCAHPDRCFRPS---IRQAIQVLNFET  194 (231)
Q Consensus       152 ~l~~~~~~~~~~~~~~l~~~c~~~dp~~Rps---~~ell~~l~~~~  194 (231)
                      ....    .....+..++.+||+.+|++||+   +.++++|+++..
T Consensus       237 ~~~~----~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~  278 (305)
T cd05609         237 EGDE----ALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLG  278 (305)
T ss_pred             Cccc----cCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccC
Confidence            0000    12234678999999999999998   788899988744

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.77  E-value=1.3e-18  Score=139.65  Aligned_cols=139  Identities=23%  Similarity=0.234  Sum_probs=98.0

Q ss_pred             eecCCCCCCeeeCCCC-cEEEeccccccccCCCCCC---ceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhC
Q 045790            6 YSRSPELPPGRGDFNF-NAKLGDFGLARLMDHELGP---KTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATG   81 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~-~~kl~Dfg~~~~~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g   81 (231)
                      +|||||++||+++.++ .++|+|||.+.........   ......++..|++||.+.+..++.++|+|++|++++++++|
T Consensus       125 ~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g  204 (268)
T cd06630         125 IHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATA  204 (268)
T ss_pred             ecCCCCHHHEEEcCCCCEEEEcccccccccccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhC
Confidence            5999999999998775 5999999998766432111   11234578899999999777788999999999999999999


Q ss_pred             CCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHH
Q 045790           82 RKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQ  161 (231)
Q Consensus        82 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  161 (231)
                      ..||......                                       .......+..         ........+...
T Consensus       205 ~~p~~~~~~~---------------------------------------~~~~~~~~~~---------~~~~~~~~~~~~  236 (268)
T cd06630         205 KPPWNAEKHS---------------------------------------NHLALIFKIA---------SATTAPSIPEHL  236 (268)
T ss_pred             CCCCCCCCCc---------------------------------------chHHHHHHHh---------ccCCCCCCchhh
Confidence            9998532210                                       0001110000         000011122233


Q ss_pred             HHHHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          162 MTCLLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       162 ~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      ...+.+++.+|++.+|++||++.++++|.++
T Consensus       237 ~~~~~~~i~~~l~~~p~~R~~~~~ll~~~~~  267 (268)
T cd06630         237 SPGLRDVTLRCLELQPEDRPPSRELLKHPVF  267 (268)
T ss_pred             CHHHHHHHHHHcCCCcccCcCHHHHhcCccc
Confidence            4567789999999999999999999999875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=99.77  E-value=1.1e-18  Score=137.29  Aligned_cols=139  Identities=16%  Similarity=0.074  Sum_probs=98.4

Q ss_pred             ecCCCCCCeeeC---CCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCC
Q 045790            7 SRSPELPPGRGD---FNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRK   83 (231)
Q Consensus         7 ~rdlk~~nil~~---~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~   83 (231)
                      ||||||+|+|..   .|..+||+|||+++.-..  .....+.+-|+.|.|||++....|+..+|+||+|+++|-|+.|.+
T Consensus       184 HRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~--~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyP  261 (400)
T KOG0604|consen  184 HRDLKPENLLYTTTSPNAPLKLTDFGFAKETQE--PGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYP  261 (400)
T ss_pred             hccCChhheeeecCCCCcceEecccccccccCC--CccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCC
Confidence            999999999996   456789999999987432  233455667899999999977779999999999999999999999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccH----
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDE----  159 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----  159 (231)
                      ||.+....                                   ...+....             .+. .....++.    
T Consensus       262 PFYS~hg~-----------------------------------aispgMk~-------------rI~-~gqy~FP~pEWs  292 (400)
T KOG0604|consen  262 PFYSNHGL-----------------------------------AISPGMKR-------------RIR-TGQYEFPEPEWS  292 (400)
T ss_pred             cccccCCc-----------------------------------cCChhHHh-------------Hhh-ccCccCCChhHh
Confidence            99654311                                   00000000             000 00011222    


Q ss_pred             HHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          160 QQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       160 ~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                      ...+...++++..|..+|.+|.|+.++++|+|-++..
T Consensus       293 ~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~~  329 (400)
T KOG0604|consen  293 CVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQYE  329 (400)
T ss_pred             HHHHHHHHHHHHHhcCCchhheeHHHhhcCchhcccc
Confidence            1233445567777899999999999999999976543

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.77  E-value=7.6e-19  Score=139.68  Aligned_cols=138  Identities=20%  Similarity=0.147  Sum_probs=100.0

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCC-ceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCC
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGP-KTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRK   83 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~   83 (231)
                      .+|+||+|+||+++.++.++|+|||.+......... ......++..|++||.+.....+.++|+|++|++++++++|..
T Consensus       122 ~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~  201 (260)
T cd06606         122 IVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKP  201 (260)
T ss_pred             ccccCCCHHHEEEcCCCCEEEcccccEEecccccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCC
Confidence            359999999999999999999999998766543211 1233467788999999977778999999999999999999999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||.....                                         .........         ........+.....
T Consensus       202 p~~~~~~-----------------------------------------~~~~~~~~~---------~~~~~~~~~~~~~~  231 (260)
T cd06606         202 PWSELGN-----------------------------------------PMAALYKIG---------SSGEPPEIPEHLSE  231 (260)
T ss_pred             CCCCCCc-----------------------------------------hHHHHHhcc---------ccCCCcCCCcccCH
Confidence            9864320                                         001111110         00011111222245


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      .+.+++.+|++.+|++||++.++++|+++
T Consensus       232 ~l~~~i~~~l~~~p~~Rp~~~~ll~~~~~  260 (260)
T cd06606         232 EAKDFLRKCLRRDPKKRPTADELLQHPFL  260 (260)
T ss_pred             HHHHHHHHhCcCChhhCCCHHHHhhCCCC
Confidence            67888999999999999999999999874

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.77  E-value=8.4e-19  Score=140.75  Aligned_cols=134  Identities=20%  Similarity=0.187  Sum_probs=95.7

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCC--CCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHEL--GPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~   83 (231)
                      .||||||+||+++.++.++|+|||+++......  ........++..|++||.+.+..++.++|+||+|++++++++|..
T Consensus       128 ~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~  207 (264)
T cd06653         128 VHRDIKGANILRDSAGNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKP  207 (264)
T ss_pred             ecCCCCHHHEEEcCCCCEEECccccccccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCC
Confidence            599999999999999999999999987653211  111123457889999999987778899999999999999999999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||......                                         .. +.+.         .........+.....
T Consensus       208 p~~~~~~~-----------------------------------------~~-~~~~---------~~~~~~~~~p~~~~~  236 (264)
T cd06653         208 PWAEYEAM-----------------------------------------AA-IFKI---------ATQPTKPMLPDGVSD  236 (264)
T ss_pred             CCCccCHH-----------------------------------------HH-HHHH---------HcCCCCCCCCcccCH
Confidence            99643211                                         00 0000         001111112223345


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHh
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLN  191 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~  191 (231)
                      .+.+++.+||+ ++..||++.+++.|+.
T Consensus       237 ~~~~~i~~~l~-~~~~r~~~~~~~~~~~  263 (264)
T cd06653         237 ACRDFLKQIFV-EEKRRPTAEFLLRHPF  263 (264)
T ss_pred             HHHHHHHHHhc-CcccCccHHHHhcCCC
Confidence            57788899999 4699999999998864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.76  E-value=2.1e-18  Score=143.78  Aligned_cols=166  Identities=14%  Similarity=0.090  Sum_probs=98.9

Q ss_pred             eecCCCCCCeeeC-CCCcEEEeccccccccCCCCCCc--eeEeeccccccchhhhhh-CCCCCCcccHhHHHHHHHHHhC
Q 045790            6 YSRSPELPPGRGD-FNFNAKLGDFGLARLMDHELGPK--TIMLVGTLAYMASEYIST-GRVSKELDVFSFRVVALEIATG   81 (231)
Q Consensus         6 ~~rdlk~~nil~~-~~~~~kl~Dfg~~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~el~~g   81 (231)
                      .|||||++||+++ .++.++++|||++..+.......  .....++..|+|||.+.. ..++.++|+||+||+++++++|
T Consensus       136 vH~dikp~Nili~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g  215 (342)
T cd07854         136 LHRDLKPANVFINTEDLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTG  215 (342)
T ss_pred             ccCCCCHHHEEEcCCCceEEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhC
Confidence            4999999999997 46678999999987653211111  122356778999998754 4478899999999999999999


Q ss_pred             CCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHH
Q 045790           82 RKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQ  161 (231)
Q Consensus        82 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  161 (231)
                      +.||...........+....+........                .....+.......  .......... ...    ..
T Consensus       216 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~--~~~~~~~~~~-~~~----~~  272 (342)
T cd07854         216 KPLFAGAHELEQMQLILESVPVVREEDRN----------------ELLNVIPSFVRND--GGEPRRPLRD-LLP----GV  272 (342)
T ss_pred             CCCCCCCCHHHHHHHHHHhcCCCChHHhh----------------hhhhhhhhhhhhc--ccccCCCHHH-Hcc----CC
Confidence            99997554322222211111110000000                0000000000000  0000000000 000    12


Q ss_pred             HHHHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          162 MTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       162 ~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      ...+.+++..||+.||++|||+.+++.|.++..
T Consensus       273 ~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~~  305 (342)
T cd07854         273 NPEALDFLEQILTFNPMDRLTAEEALMHPYMSC  305 (342)
T ss_pred             CHHHHHHHHHHhCCCchhccCHHHHhCCCcccc
Confidence            245678999999999999999999999999964

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.76  E-value=9.5e-19  Score=142.16  Aligned_cols=83  Identities=29%  Similarity=0.342  Sum_probs=67.3

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCC--CCCCcccHhHHHHHHHHHhCC
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGR--VSKELDVFSFRVVALEIATGR   82 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~--~~~~~Dv~s~G~vl~el~~g~   82 (231)
                      -+||||||.||+++.++.++|+|||++...............|+..|++||.+.+..  .+.++|+||+|++++++++|.
T Consensus       126 ~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~  205 (288)
T cd05583         126 IIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGA  205 (288)
T ss_pred             eeccCCCHHHeEECCCCCEEEEECccccccccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCC
Confidence            369999999999999999999999998765432222223345788999999986544  678899999999999999999


Q ss_pred             Ccccc
Q 045790           83 KVINR   87 (231)
Q Consensus        83 ~p~~~   87 (231)
                      .||..
T Consensus       206 ~p~~~  210 (288)
T cd05583         206 SPFTV  210 (288)
T ss_pred             CCccc
Confidence            99853

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.76  E-value=1.1e-18  Score=139.48  Aligned_cols=135  Identities=18%  Similarity=0.069  Sum_probs=98.7

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      +|+||||+||+++.++.++|+|||++.......  ......++..|++||.+....++.++|+||+|++++++++|..||
T Consensus       122 ~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~  199 (258)
T cd05578         122 IHRDIKPDNILLDEQGHVHITDFNIATKVTPDT--LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPY  199 (258)
T ss_pred             eccCCCHHHeEEcCCCCEEEeecccccccCCCc--cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCC
Confidence            599999999999999999999999987654321  223345777899999998777899999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      ......                                        ...+..+....          .....+......+
T Consensus       200 ~~~~~~----------------------------------------~~~~~~~~~~~----------~~~~~~~~~~~~~  229 (258)
T cd05578         200 RGHSRT----------------------------------------IRDQIRAKQET----------ADVLYPATWSTEA  229 (258)
T ss_pred             CCCCcc----------------------------------------HHHHHHHHhcc----------ccccCcccCcHHH
Confidence            754310                                        11111111100          0011111223567


Q ss_pred             HHHHHhhcCCCCCCCCCH--HHHHHHHhc
Q 045790          166 LIVGLWCAHPDRCFRPSI--RQAIQVLNF  192 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps~--~ell~~l~~  192 (231)
                      .+++.+||+.||.+||++  .|+++|.++
T Consensus       230 ~~~i~~~l~~~p~~R~~~~~~~l~~~~~~  258 (258)
T cd05578         230 IDAINKLLERDPQKRLGDNLKDLKNHPYF  258 (258)
T ss_pred             HHHHHHHccCChhHcCCccHHHHhcCCCC
Confidence            789999999999999999  999888764

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.76  E-value=1.6e-18  Score=138.74  Aligned_cols=134  Identities=17%  Similarity=0.148  Sum_probs=96.1

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCc
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      -+|+|||++||+++. +.++|+|||++........ ......++..|++||...+..++.++|+||+|++++++++|..|
T Consensus       127 i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~  204 (260)
T cd08222         127 ILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGSCD-LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHA  204 (260)
T ss_pred             ccccCCChhheEeec-CCEeecccCceeecCCCcc-cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCC
Confidence            369999999999985 4599999999876543221 12234577889999998777788899999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |......                                          ........          ......+......
T Consensus       205 ~~~~~~~------------------------------------------~~~~~~~~----------~~~~~~~~~~~~~  232 (260)
T cd08222         205 FEGQNFL------------------------------------------SVVLRIVE----------GPTPSLPETYSRQ  232 (260)
T ss_pred             CCCccHH------------------------------------------HHHHHHHc----------CCCCCCcchhcHH
Confidence            8643211                                          11111100          0001112233346


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      +.+++.+||+.+|++||++.++++|+++
T Consensus       233 ~~~li~~~l~~~p~~Rp~~~~il~~~~~  260 (260)
T cd08222         233 LNSIMQSMLNKDPSLRPSAAEILRNPFI  260 (260)
T ss_pred             HHHHHHHHhcCChhhCcCHHHHhhCCCC
Confidence            7789999999999999999999999763

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.76  E-value=7e-19  Score=141.91  Aligned_cols=134  Identities=16%  Similarity=0.155  Sum_probs=98.1

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCC-------------------CceeEeeccccccchhhhhhCCCCCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELG-------------------PKTIMLVGTLAYMASEYISTGRVSKEL   66 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~-------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~   66 (231)
                      +|+|||++||+++.++.++++|||++........                   .......++..|++||+.....++.++
T Consensus       124 ~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~  203 (280)
T cd05581         124 IHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSS  203 (280)
T ss_pred             eecCCCHHHeEECCCCCEEecCCccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhh
Confidence            6999999999999999999999999876543221                   112234567889999998777788999


Q ss_pred             ccHhHHHHHHHHHhCCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhh
Q 045790           67 DVFSFRVVALEIATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLL  146 (231)
Q Consensus        67 Dv~s~G~vl~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (231)
                      |+|++|++++++++|..||........                                          .....      
T Consensus       204 Di~slG~~l~~l~~g~~p~~~~~~~~~------------------------------------------~~~~~------  235 (280)
T cd05581         204 DLWALGCIIYQMLTGKPPFRGSNEYLT------------------------------------------FQKIL------  235 (280)
T ss_pred             hHHHHHHHHHHHHhCCCCCCCccHHHH------------------------------------------HHHHH------
Confidence            999999999999999999964331100                                          00000      


Q ss_pred             hhhcccccCcccHHHHHHHHHHHHhhcCCCCCCCCCH----HHHHHHHhc
Q 045790          147 SAANERLDSRFDEQQMTCLLIVGLWCAHPDRCFRPSI----RQAIQVLNF  192 (231)
Q Consensus       147 ~~~~~~l~~~~~~~~~~~~~~l~~~c~~~dp~~Rps~----~ell~~l~~  192 (231)
                           ......+......+..++.+||+.+|++||++    .++++|+++
T Consensus       236 -----~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~  280 (280)
T cd05581         236 -----KLEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF  280 (280)
T ss_pred             -----hcCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence                 00001111223457889999999999999999    999998764

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.76  E-value=4.1e-19  Score=140.56  Aligned_cols=77  Identities=16%  Similarity=0.064  Sum_probs=64.3

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+||+++.++.++++|||.+......    .....++..|++||.+....++.++|+||+|++++++++|..++
T Consensus       107 ~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~  182 (237)
T cd05576         107 VCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS----CDGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLV  182 (237)
T ss_pred             eccCCCHHHEEEcCCCCEEEecccchhccccc----cccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchh
Confidence            59999999999999999999999987655432    12234466799999987777889999999999999999999877


Q ss_pred             c
Q 045790           86 N   86 (231)
Q Consensus        86 ~   86 (231)
                      .
T Consensus       183 ~  183 (237)
T cd05576         183 E  183 (237)
T ss_pred             h
Confidence            4

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.76  E-value=2.2e-19  Score=156.89  Aligned_cols=135  Identities=19%  Similarity=0.167  Sum_probs=97.0

Q ss_pred             ecCCCCCCeeeCC---C--CcEEEeccccccccCCCCCCc--eeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHH
Q 045790            7 SRSPELPPGRGDF---N--FNAKLGDFGLARLMDHELGPK--TIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIA   79 (231)
Q Consensus         7 ~rdlk~~nil~~~---~--~~~kl~Dfg~~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~   79 (231)
                      ||||||+||||+.   +  ..++|+|||+|+.+..+....  .....||-+|+|||.+....-..++||||+||++++.+
T Consensus       629 HRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvl  708 (903)
T KOG1027|consen  629 HRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVL  708 (903)
T ss_pred             cccCCCceEEEEccCCCcceeEEecccccccccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEe
Confidence            9999999999975   2  468999999999886544332  34567899999999998877778999999999999988


Q ss_pred             hC-CCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCccc
Q 045790           80 TG-RKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFD  158 (231)
Q Consensus        80 ~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  158 (231)
                      +| ..||......                                     ..+       +.......    -.+.... 
T Consensus       709 tgG~HpFGd~~~R-------------------------------------~~N-------Il~~~~~L----~~L~~~~-  739 (903)
T KOG1027|consen  709 TGGSHPFGDSLER-------------------------------------QAN-------ILTGNYTL----VHLEPLP-  739 (903)
T ss_pred             cCCccCCCchHHh-------------------------------------hhh-------hhcCccce----eeeccCc-
Confidence            75 8999754421                                     000       00000000    0110100 


Q ss_pred             HHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcc
Q 045790          159 EQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFE  193 (231)
Q Consensus       159 ~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~  193 (231)
                       ++  ...+|+.++++.+|..||+|.+|+.|+-|.
T Consensus       740 -d~--eA~dLI~~ml~~dP~~RPsa~~VL~HPlFW  771 (903)
T KOG1027|consen  740 -DC--EAKDLISRMLNPDPQLRPSATDVLNHPLFW  771 (903)
T ss_pred             -hH--HHHHHHHHhcCCCcccCCCHHHHhCCCccC
Confidence             11  456788899999999999999999998774

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.75  E-value=1.6e-18  Score=157.28  Aligned_cols=82  Identities=21%  Similarity=0.137  Sum_probs=68.3

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCC-----------------CceeEeeccccccchhhhhhCCCCCCccc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELG-----------------PKTIMLVGTLAYMASEYISTGRVSKELDV   68 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~-----------------~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv   68 (231)
                      .||||||+||+++.++.++|+|||+++.......                 .......|+..|+|||.+.+..++.++||
T Consensus       135 IHRDLKPeNILLd~dg~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDI  214 (932)
T PRK13184        135 LHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDI  214 (932)
T ss_pred             cccCCchheEEEcCCCCEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHH
Confidence            5999999999999999999999999976521100                 00112468999999999988889999999


Q ss_pred             HhHHHHHHHHHhCCCcccc
Q 045790           69 FSFRVVALEIATGRKVINR   87 (231)
Q Consensus        69 ~s~G~vl~el~~g~~p~~~   87 (231)
                      ||+||++++|++|..||..
T Consensus       215 WSLGVILyELLTG~~PF~~  233 (932)
T PRK13184        215 YALGVILYQMLTLSFPYRR  233 (932)
T ss_pred             HHHHHHHHHHHHCCCCCCC
Confidence            9999999999999999965

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.75  E-value=1e-18  Score=145.74  Aligned_cols=166  Identities=19%  Similarity=0.110  Sum_probs=102.4

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhh-CCCCCCcccHhHHHHHHHHHhCCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIST-GRVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      .||||||+||+++.++.++++|||++......    .....++..|++||.+.+ ..++.++|+||+|++++++++|..|
T Consensus       140 ~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~p  215 (343)
T cd07880         140 IHRDLKPGNLAVNEDCELKILDFGLARQTDSE----MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPL  215 (343)
T ss_pred             ecCCCCHHHEEEcCCCCEEEeecccccccccC----ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence            59999999999999999999999998765322    123356778999999865 3478889999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |...........+..............+.               ......+...+.      ......+ ..........
T Consensus       216 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~------~~~~~~~-~~~~~~~~~~  273 (343)
T cd07880         216 FKGHDHLDQLMEIMKVTGTPSKEFVQKLQ---------------SEDAKNYVKKLP------RFRKKDF-RSLLPNANPL  273 (343)
T ss_pred             CCCCCHHHHHHHHHHhcCCCCHHHHHhhc---------------chhHHHHHHhcc------ccCcchH-HHhccCCChH
Confidence            97654322222221111000000000000               000000000000      0000000 0000111234


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhcccCCC
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNFETTMP  197 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~~  197 (231)
                      +.+++.+|++.||++|||+.+++.|.++.....
T Consensus       274 ~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~~~  306 (343)
T cd07880         274 AVNVLEKMLVLDAESRITAAEALAHPYFEEFHD  306 (343)
T ss_pred             HHHHHHHHcCCChhhCCCHHHHhcCccHhhhcC
Confidence            678999999999999999999999999976543

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.75  E-value=1.7e-18  Score=139.92  Aligned_cols=127  Identities=19%  Similarity=0.127  Sum_probs=88.5

Q ss_pred             eecCCCCCCeeeCCCC-------cEEEeccccccccCCCCCCceeEeeccccccchhhhhh-CCCCCCcccHhHHHHHHH
Q 045790            6 YSRSPELPPGRGDFNF-------NAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIST-GRVSKELDVFSFRVVALE   77 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~-------~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~e   77 (231)
                      .||||||+||+++..+       .+|++|||++......     ....++..|++||.+.+ ..++.++|+||||+++|+
T Consensus       139 iH~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~~-----~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~e  213 (274)
T cd05076         139 VHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALSR-----EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLE  213 (274)
T ss_pred             cCCCCCcccEEEeccCcccCccceeeecCCccccccccc-----cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHH
Confidence            5999999999997543       3799999987543211     12346678999998865 457899999999999999


Q ss_pred             H-HhCCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCc
Q 045790           78 I-ATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSR  156 (231)
Q Consensus        78 l-~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  156 (231)
                      + ++|..||......                                       ....+...    .       ..... 
T Consensus       214 l~~~g~~p~~~~~~~---------------------------------------~~~~~~~~----~-------~~~~~-  242 (274)
T cd05076         214 ICFDGEVPLKERTPS---------------------------------------EKERFYEK----K-------HRLPE-  242 (274)
T ss_pred             HHhCCCCCccccChH---------------------------------------HHHHHHHh----c-------cCCCC-
Confidence            8 4688888643211                                       01111100    0       00101 


Q ss_pred             ccHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHh
Q 045790          157 FDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLN  191 (231)
Q Consensus       157 ~~~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~  191 (231)
                         .....+.+++.+||+.+|++|||+.+|+++|.
T Consensus       243 ---~~~~~~~~li~~cl~~~p~~Rps~~~il~~L~  274 (274)
T cd05076         243 ---PSCKELATLISQCLTYEPTQRPSFRTILRDLT  274 (274)
T ss_pred             ---CCChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence               11235778999999999999999999999873

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.75  E-value=1.3e-18  Score=141.54  Aligned_cols=142  Identities=18%  Similarity=0.140  Sum_probs=99.9

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhC--CCCCCcccHhHHHHHHHHHhCCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTG--RVSKELDVFSFRVVALEIATGRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~--~~~~~~Dv~s~G~vl~el~~g~~   83 (231)
                      .||||||+||+++.++.+||+|||++...............|+..|++||.+...  .++.++||||+|++++++++|..
T Consensus       127 ~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~  206 (290)
T cd05613         127 IYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGAS  206 (290)
T ss_pred             eccCCCHHHeEECCCCCEEEeeCccceecccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCC
Confidence            5999999999999999999999999876543222222345678899999998643  36788999999999999999999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||.....                                      ......+........       +    .++.....
T Consensus       207 p~~~~~~--------------------------------------~~~~~~~~~~~~~~~-------~----~~~~~~~~  237 (290)
T cd05613         207 PFTVDGE--------------------------------------KNSQAEISRRILKSE-------P----PYPQEMSA  237 (290)
T ss_pred             CCCcCCc--------------------------------------cccHHHHHHHhhccC-------C----CCCccCCH
Confidence            9853210                                      001111111111000       0    11112234


Q ss_pred             HHHHHHHhhcCCCCCCCC-----CHHHHHHHHhcccCC
Q 045790          164 CLLIVGLWCAHPDRCFRP-----SIRQAIQVLNFETTM  196 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rp-----s~~ell~~l~~~~~~  196 (231)
                      .+..++.+||+.||++|+     ++.+++.|.++....
T Consensus       238 ~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~  275 (290)
T cd05613         238 LAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKIN  275 (290)
T ss_pred             HHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccCC
Confidence            567899999999999997     899999999886654

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.75  E-value=1.6e-18  Score=137.61  Aligned_cols=134  Identities=22%  Similarity=0.138  Sum_probs=98.3

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCc
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      .+|+||||.||+++.++.++|+|||++....... .......++..|++||.+.+...+.++|+|++|++++++++|..|
T Consensus       114 ~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~-~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p  192 (250)
T cd05123         114 IIYRDLKPENILLDADGHIKLTDFGLAKELSSEG-SRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPP  192 (250)
T ss_pred             ceecCCCcceEEEcCCCcEEEeecCcceecccCC-CcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCC
Confidence            4699999999999999999999999987654321 122334677789999998777788899999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |......                                          ........         ..  ...+......
T Consensus       193 ~~~~~~~------------------------------------------~~~~~~~~---------~~--~~~~~~~~~~  219 (250)
T cd05123         193 FYAEDRK------------------------------------------EIYEKILK---------DP--LRFPEFLSPE  219 (250)
T ss_pred             CCCCCHH------------------------------------------HHHHHHhc---------CC--CCCCCCCCHH
Confidence            9643311                                          01111100         00  0111112355


Q ss_pred             HHHHHHhhcCCCCCCCCCH---HHHHHHHhc
Q 045790          165 LLIVGLWCAHPDRCFRPSI---RQAIQVLNF  192 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~---~ell~~l~~  192 (231)
                      +.+++.+||..||++||++   .++++|++|
T Consensus       220 l~~~i~~~l~~~p~~R~~~~~~~~l~~~~~f  250 (250)
T cd05123         220 ARDLISGLLQKDPTKRLGSGGAEEIKAHPFF  250 (250)
T ss_pred             HHHHHHHHhcCCHhhCCCcccHHHHHhCCCC
Confidence            6789999999999999999   899988765

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=99.75  E-value=2.5e-18  Score=155.53  Aligned_cols=133  Identities=20%  Similarity=0.247  Sum_probs=91.8

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccC------C-----------CCCCceeEeeccccccchhhhhhC---CCCCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMD------H-----------ELGPKTIMLVGTLAYMASEYISTG---RVSKE   65 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~------~-----------~~~~~~~~~~g~~~y~aPE~~~~~---~~~~~   65 (231)
                      .||||||.||++|++..+||+|||++....      .           ......+..+||..|+|||++.+.   .|+.|
T Consensus       719 IHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~K  798 (1351)
T KOG1035|consen  719 IHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSK  798 (1351)
T ss_pred             eeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccccccch
Confidence            499999999999999999999999997621      0           011123557899999999999654   49999


Q ss_pred             cccHhHHHHHHHHHhCCCcccc-chhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcch
Q 045790           66 LDVFSFRVVALEIATGRKVINR-YKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERK  144 (231)
Q Consensus        66 ~Dv~s~G~vl~el~~g~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  144 (231)
                      +|+||+||+++||+.-   |.. +.....+..++                                           ...
T Consensus       799 iDmYSLGIVlFEM~yP---F~TsMERa~iL~~LR-------------------------------------------~g~  832 (1351)
T KOG1035|consen  799 IDMYSLGIVLFEMLYP---FGTSMERASILTNLR-------------------------------------------KGS  832 (1351)
T ss_pred             hhhHHHHHHHHHHhcc---CCchHHHHHHHHhcc-------------------------------------------cCC
Confidence            9999999999999764   432 11111111111                                           111


Q ss_pred             hhhhhcccccCcccHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHH
Q 045790          145 LLSAANERLDSRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVL  190 (231)
Q Consensus       145 ~~~~~~~~l~~~~~~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l  190 (231)
                      +...      ..+....+..-..++.++++.||.+||||.|||++=
T Consensus       833 iP~~------~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~s~  872 (1351)
T KOG1035|consen  833 IPEP------ADFFDPEHPEEASLIRWLLSHDPSKRPTATELLNSE  872 (1351)
T ss_pred             CCCC------cccccccchHHHHHHHHHhcCCCccCCCHHHHhhcc
Confidence            1000      122333444556788899999999999999999753

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.75  E-value=2.6e-18  Score=142.46  Aligned_cols=160  Identities=17%  Similarity=0.059  Sum_probs=100.7

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhh-CCCCCCcccHhHHHHHHHHHhCCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIST-GRVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      +||||||+||+++.++.++|+|||.+......    .....++..|++||.+.+ ..++.++|+||+|++++++++|+.|
T Consensus       130 iH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~  205 (328)
T cd07856         130 VHRDLKPSNILINENCDLKICDFGLARIQDPQ----MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPL  205 (328)
T ss_pred             ccCCCCHHHEeECCCCCEEeCccccccccCCC----cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCC
Confidence            59999999999999999999999998754321    122356778999998765 4578899999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccH-----
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDE-----  159 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----  159 (231)
                      |...........+.......+.                           .+...............-......+.     
T Consensus       206 f~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (328)
T cd07856         206 FPGKDHVNQFSIITDLLGTPPD---------------------------DVINTICSENTLRFVQSLPKREPVPFSEKFK  258 (328)
T ss_pred             CCCCCHHHHHHHHHHHhCCCCH---------------------------HHHHhccchhhHHHHhhccccCCCcHHHHcC
Confidence            9754432111111110000000                           00000000000000000000000110     


Q ss_pred             HHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          160 QQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       160 ~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                      .....+.+++.+||+.+|++|||+.+++.|.++...-
T Consensus       259 ~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~~~  295 (328)
T cd07856         259 NADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAPYH  295 (328)
T ss_pred             CCCHHHHHHHHHHcCCChhhCCCHHHHhcCCcccccc
Confidence            1135678899999999999999999999999885433

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.75  E-value=2.9e-18  Score=146.10  Aligned_cols=133  Identities=19%  Similarity=0.188  Sum_probs=101.6

Q ss_pred             eeecCCCCCCeeeCCC-CcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCC
Q 045790            5 AYSRSPELPPGRGDFN-FNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRK   83 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~   83 (231)
                      ..|||||.+||+|+++ |.+||+|+|++..+...   .....+||+-|||||... ..|+..+||||||+-++||+|+..
T Consensus       166 IIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s---~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eY  241 (632)
T KOG0584|consen  166 IIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKS---HAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEY  241 (632)
T ss_pred             ccccccccceEEEcCCcCceeecchhHHHHhhcc---ccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccC
Confidence            4699999999999974 78999999999876532   234579999999999874 679999999999999999999999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchh---hhhhcccccCcccHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKL---LSAANERLDSRFDEQ  160 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~~~~~  160 (231)
                      ||...                                         .+-+..+.++..+-+.   -++-|          
T Consensus       242 PYsEC-----------------------------------------~n~AQIYKKV~SGiKP~sl~kV~d----------  270 (632)
T KOG0584|consen  242 PYSEC-----------------------------------------TNPAQIYKKVTSGIKPAALSKVKD----------  270 (632)
T ss_pred             Chhhh-----------------------------------------CCHHHHHHHHHcCCCHHHhhccCC----------
Confidence            99543                                         2333444443322211   11122          


Q ss_pred             HHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccC
Q 045790          161 QMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETT  195 (231)
Q Consensus       161 ~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~  195 (231)
                        ..+.+|+.+|+.. ..+|+|+.|||++..|...
T Consensus       271 --Pevr~fIekCl~~-~~~R~sa~eLL~d~Ff~~d  302 (632)
T KOG0584|consen  271 --PEVREFIEKCLAT-KSERLSAKELLKDPFFDED  302 (632)
T ss_pred             --HHHHHHHHHHhcC-chhccCHHHHhhChhhccc
Confidence              2346688899998 8999999999999888553

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.75  E-value=2.1e-18  Score=143.19  Aligned_cols=166  Identities=16%  Similarity=0.076  Sum_probs=101.9

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCC-------------CCceeEeeccccccchhhhhhCC-CCCCcccHhH
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHEL-------------GPKTIMLVGTLAYMASEYISTGR-VSKELDVFSF   71 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~-------------~~~~~~~~g~~~y~aPE~~~~~~-~~~~~Dv~s~   71 (231)
                      .|||||++||+++.++.++|+|||.+.......             ........++..|++||.+.+.. ++.++|+||+
T Consensus       141 ~H~dl~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~sl  220 (335)
T PTZ00024        141 MHRDLSPANIFINSKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSV  220 (335)
T ss_pred             ecccccHHHeEECCCCCEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHH
Confidence            599999999999999999999999987654111             00112234577899999986543 6889999999


Q ss_pred             HHHHHHHHhCCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcc
Q 045790           72 RVVALEIATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANE  151 (231)
Q Consensus        72 G~vl~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (231)
                      |++++++++|..||......+....+...........+           ....      .+..+       ........+
T Consensus       221 G~~l~el~tg~~p~~~~~~~~~~~~i~~~~~~~~~~~~-----------~~~~------~~~~~-------~~~~~~~~~  276 (335)
T PTZ00024        221 GCIFAELLTGKPLFPGENEIDQLGRIFELLGTPNEDNW-----------PQAK------KLPLY-------TEFTPRKPK  276 (335)
T ss_pred             HHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCchhhC-----------cchh------hcccc-------cccCcCCcc
Confidence            99999999999999765433222222111000000000           0000      00000       000000000


Q ss_pred             cccCcccHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          152 RLDSRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       152 ~l~~~~~~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                      .+.. ........+.+++.+||+.+|++|||+.+++.|.++....
T Consensus       277 ~~~~-~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~~~~  320 (335)
T PTZ00024        277 DLKT-IFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYFKSDP  320 (335)
T ss_pred             cHHH-hCcCCChHHHHHHHHHcCCCchhccCHHHHhcCcccCCCC
Confidence            0000 0001234577899999999999999999999999997654

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.75  E-value=2e-18  Score=137.22  Aligned_cols=133  Identities=21%  Similarity=0.228  Sum_probs=96.4

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||.||+++.++.++|+|||++........ ......++..|++||.+.....+.++|+|++|++++++++|..||
T Consensus       121 ~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~  199 (254)
T cd06627         121 IHRDIKAANILTTKDGVVKLADFGVATKLNDVSK-DDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPY  199 (254)
T ss_pred             ccCCCCHHHEEECCCCCEEEeccccceecCCCcc-cccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCC
Confidence            5999999999999999999999999876653222 123346778899999987777888999999999999999999998


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      ......                                         ... +.... ..     .+.    .+......+
T Consensus       200 ~~~~~~-----------------------------------------~~~-~~~~~-~~-----~~~----~~~~~~~~~  227 (254)
T cd06627         200 YDLNPM-----------------------------------------AAL-FRIVQ-DD-----HPP----LPEGISPEL  227 (254)
T ss_pred             CCccHH-----------------------------------------HHH-HHHhc-cC-----CCC----CCCCCCHHH
Confidence            643211                                         000 00000 00     001    111123456


Q ss_pred             HHHHHhhcCCCCCCCCCHHHHHHHHh
Q 045790          166 LIVGLWCAHPDRCFRPSIRQAIQVLN  191 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps~~ell~~l~  191 (231)
                      ..++.+||+.+|++|||+.+++.+.+
T Consensus       228 ~~~i~~~l~~~p~~R~~~~~~l~~~~  253 (254)
T cd06627         228 KDFLMQCFQKDPNLRPTAKQLLKHPW  253 (254)
T ss_pred             HHHHHHHHhCChhhCcCHHHHhcCCC
Confidence            78899999999999999999998765

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.74  E-value=2.9e-18  Score=134.81  Aligned_cols=136  Identities=24%  Similarity=0.144  Sum_probs=97.9

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCc
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      -+|+||+++||+++.++.++++|||.+.......  ......++..|++||.+....++.++|+|++|++++++++|..|
T Consensus       108 i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~--~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p  185 (244)
T smart00220      108 IIHRDLKPENILLDEDGHVKLADFGLARQLDPGG--LLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPP  185 (244)
T ss_pred             eecCCcCHHHeEECCCCcEEEccccceeeecccc--ccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCC
Confidence            3699999999999999999999999987764321  22345677889999999877788899999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccH-HHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDE-QQMT  163 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~  163 (231)
                      |......                                      ..+..+...            ......... ....
T Consensus       186 ~~~~~~~--------------------------------------~~~~~~~~~------------~~~~~~~~~~~~~~  215 (244)
T smart00220      186 FPGDDQL--------------------------------------LELFKKIGK------------PKPPFPPPEWKISP  215 (244)
T ss_pred             CCCCCcH--------------------------------------HHHHHHHhc------------cCCCCccccccCCH
Confidence            8642110                                      001111100            000000000 0234


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      .+..++.+|+..+|++||++.+++++.++
T Consensus       216 ~~~~~i~~~l~~~p~~Rp~~~~~~~~~~~  244 (244)
T smart00220      216 EAKDLIRKLLVKDPEKRLTAEEALQHPFF  244 (244)
T ss_pred             HHHHHHHHHccCCchhccCHHHHhhCCCC
Confidence            67889999999999999999999997653

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.74  E-value=2.6e-18  Score=143.39  Aligned_cols=82  Identities=26%  Similarity=0.299  Sum_probs=74.8

Q ss_pred             ecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCccc
Q 045790            7 SRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVIN   86 (231)
Q Consensus         7 ~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~~   86 (231)
                      -|||||+|.++|.+|-+||.|||+++.++.  ...+.+++||+.|.|||++....-+.++|.|++||+++|+++|.+||.
T Consensus       543 YRDLKPENllLd~~Gy~KLVDFGFAKki~~--g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs  620 (732)
T KOG0614|consen  543 YRDLKPENLLLDNRGYLKLVDFGFAKKIGS--GRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFS  620 (732)
T ss_pred             eccCChhheeeccCCceEEeehhhHHHhcc--CCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCC
Confidence            489999999999999999999999998864  355778999999999999988888999999999999999999999998


Q ss_pred             cchh
Q 045790           87 RYKA   90 (231)
Q Consensus        87 ~~~~   90 (231)
                      +.++
T Consensus       621 ~~dp  624 (732)
T KOG0614|consen  621 GVDP  624 (732)
T ss_pred             CCch
Confidence            7654

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.73  E-value=1.2e-17  Score=136.71  Aligned_cols=179  Identities=18%  Similarity=0.202  Sum_probs=119.5

Q ss_pred             ecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCccc
Q 045790            7 SRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVIN   86 (231)
Q Consensus         7 ~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~~   86 (231)
                      -||||.+||++|..|.+||+|||+++.-- -....+.+++||+-|+|||++...+|..++|.||||++++||+.|++||+
T Consensus       473 YRDLKLDNvmLd~eGHiKi~DFGmcKEni-~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFd  551 (683)
T KOG0696|consen  473 YRDLKLDNVMLDSEGHIKIADFGMCKENI-FDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFD  551 (683)
T ss_pred             eeeccccceEeccCCceEeeecccccccc-cCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCC
Confidence            59999999999999999999999997521 12234578899999999999999999999999999999999999999999


Q ss_pred             cchhhhhhhhccccCCCC-CCccccccccc-------cchhhccCCCCCCC----chhHHHHHHHhhcchhhhhhccccc
Q 045790           87 RYKAQKLRTQFVVPHPCS-NTGSVEKLGVE-------GEKAVLGGSSKNYC----PKLVAWVWDLYGERKLLSAANERLD  154 (231)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-------~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~  154 (231)
                      +++..+....|+.-.... -.-+.++....       +.++.--+.+....    ..+...-|+.+....++..+.|...
T Consensus       552 GeDE~elF~aI~ehnvsyPKslSkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~iDWek~E~~eiqPPfkPk~k  631 (683)
T KOG0696|consen  552 GEDEDELFQAIMEHNVSYPKSLSKEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRRIDWEKLERREIQPPFKPKIK  631 (683)
T ss_pred             CCCHHHHHHHHHHccCcCcccccHHHHHHHHHHhhcCCccccCCCCccccchhhCcchhhccHHHHhhccCCCCCCCccc
Confidence            999998888887633333 22333332221       11121111111111    1122223555555566666666654


Q ss_pred             CcccHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          155 SRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       155 ~~~~~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      ...+.+.      +-...+...+..-|+-..++..|.+
T Consensus       632 ~~r~~eN------FD~~Ft~~~~~lTPpD~~v~~nldq  663 (683)
T KOG0696|consen  632 CGRDAEN------FDKFFTREPTDLTPPDKLVMMNLDQ  663 (683)
T ss_pred             cCCchhh------hhHHHhcCCCCCCCchHHHHhcCch
Confidence            4333332      2233445567777777777776654

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.73  E-value=1.4e-18  Score=130.17  Aligned_cols=84  Identities=23%  Similarity=0.290  Sum_probs=69.8

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhh----hCCCCCCcccHhHHHHHHHHHhC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIS----TGRVSKELDVFSFRVVALEIATG   81 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~----~~~~~~~~Dv~s~G~vl~el~~g   81 (231)
                      .|||+||+|||++..|.+|++|||.+-.+.++..  .....|...|||||.+.    +..|+-++||||+|+.+.||.++
T Consensus       171 IHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSiA--kt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~l  248 (282)
T KOG0984|consen  171 IHRDVKPSNILINYDGQVKICDFGISGYLVDSIA--KTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAIL  248 (282)
T ss_pred             hhccCCcceEEEccCCcEEEcccccceeehhhhH--HHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhc
Confidence            5999999999999999999999999877653221  12356788899999984    34689999999999999999999


Q ss_pred             CCccccchhh
Q 045790           82 RKVINRYKAQ   91 (231)
Q Consensus        82 ~~p~~~~~~~   91 (231)
                      +.||.....+
T Consensus       249 r~PY~~w~tp  258 (282)
T KOG0984|consen  249 RFPYESWGTP  258 (282)
T ss_pred             cccccccCCH
Confidence            9999876543

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.73  E-value=4.9e-18  Score=145.13  Aligned_cols=86  Identities=23%  Similarity=0.218  Sum_probs=70.7

Q ss_pred             eee-ecCCCCCCeeeCCCCcEEEecccccccc---------CCCCCC--------------------------------c
Q 045790            4 VAY-SRSPELPPGRGDFNFNAKLGDFGLARLM---------DHELGP--------------------------------K   41 (231)
Q Consensus         4 ~~~-~rdlk~~nil~~~~~~~kl~Dfg~~~~~---------~~~~~~--------------------------------~   41 (231)
                      +|| ||||||+|||||.+|.+||+|||+|..+         ..+...                                .
T Consensus       748 mGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~  827 (1034)
T KOG0608|consen  748 MGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRIL  827 (1034)
T ss_pred             ccceecccCccceEEccCCceeeeeccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhh
Confidence            577 9999999999999999999999998532         111100                                0


Q ss_pred             eeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCccccch
Q 045790           42 TIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVINRYK   89 (231)
Q Consensus        42 ~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~~~~~   89 (231)
                      ....+||+.|+|||++....++..+|.|+.|++++||+.|++||....
T Consensus       828 ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~g~~pf~~~t  875 (1034)
T KOG0608|consen  828 AHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLVGQPPFLADT  875 (1034)
T ss_pred             hhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHhhCCCCccCCC
Confidence            123579999999999988889999999999999999999999997544

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=99.72  E-value=9.3e-18  Score=136.90  Aligned_cols=139  Identities=16%  Similarity=0.080  Sum_probs=102.6

Q ss_pred             ecCCCCCCeeeCCCCcEEEeccccccccCC---------------------------------C-C--------------
Q 045790            7 SRSPELPPGRGDFNFNAKLGDFGLARLMDH---------------------------------E-L--------------   38 (231)
Q Consensus         7 ~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~---------------------------------~-~--------------   38 (231)
                      -|||||+||||.++|++.|+||.++.....                                 . .              
T Consensus       202 YRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p  281 (459)
T KOG0610|consen  202 YRDLKPENILVREDGHIMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLP  281 (459)
T ss_pred             eccCCcceeEEecCCcEEeeeccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccch
Confidence            599999999999999999999988743210                                 0 0              


Q ss_pred             -------CCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCccccchhhhhhhhccccCCCCCCccccc
Q 045790           39 -------GPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEK  111 (231)
Q Consensus        39 -------~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  111 (231)
                             ......++||-.|.|||++.+..-..++|.|+|||++|||++|..||.+.....-+.                
T Consensus       282 ~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~----------------  345 (459)
T KOG0610|consen  282 ELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLR----------------  345 (459)
T ss_pred             hhhcCCCCccccccccccccccceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHH----------------
Confidence                   001234678889999999999889999999999999999999999998766331111                


Q ss_pred             cccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHHHHHHHhhcCCCCCCCCC----HHHHH
Q 045790          112 LGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCLLIVGLWCAHPDRCFRPS----IRQAI  187 (231)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~c~~~dp~~Rps----~~ell  187 (231)
                                                         .++...+.-...........+|+++-|.+||.+|.-    |.||-
T Consensus       346 -----------------------------------NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK  390 (459)
T KOG0610|consen  346 -----------------------------------NIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIK  390 (459)
T ss_pred             -----------------------------------HHhcCCCcCCCCCcchhHHHHHHHHHhccChhhhhccccchHHhh
Confidence                                               111111111111133455677888999999999998    99999


Q ss_pred             HHHhcccCC
Q 045790          188 QVLNFETTM  196 (231)
Q Consensus       188 ~~l~~~~~~  196 (231)
                      +|+-|....
T Consensus       391 ~HpFF~gVn  399 (459)
T KOG0610|consen  391 RHPFFEGVN  399 (459)
T ss_pred             cCccccCCC
Confidence            999996543

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.72  E-value=8.5e-18  Score=138.22  Aligned_cols=147  Identities=18%  Similarity=0.134  Sum_probs=97.5

Q ss_pred             ecCCCCCCeeeCCCCcEEEeccccccccCCCCC---CceeEeeccccccchhhhhhC----CC--CCCcccHhHHHHHHH
Q 045790            7 SRSPELPPGRGDFNFNAKLGDFGLARLMDHELG---PKTIMLVGTLAYMASEYISTG----RV--SKELDVFSFRVVALE   77 (231)
Q Consensus         7 ~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~~g~~~y~aPE~~~~~----~~--~~~~Dv~s~G~vl~e   77 (231)
                      |||||++|||+..|+.+-|+|+|++........   ......+||.+|||||++...    .|  -..+||||||.|+||
T Consensus       339 HRDlKSKNILVKkn~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWE  418 (513)
T KOG2052|consen  339 HRDLKSKNILVKKNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWE  418 (513)
T ss_pred             ccccccccEEEccCCcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHH
Confidence            999999999999999999999999976543322   124567899999999998432    11  244999999999999


Q ss_pred             HHhC----------CCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhh
Q 045790           78 IATG----------RKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLS  147 (231)
Q Consensus        78 l~~g----------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (231)
                      +.-+          +.||.+..+                                     ..+.+.+.-.     --...
T Consensus       419 iarRc~~ggi~eey~~Pyyd~Vp-------------------------------------~DPs~eeMrk-----VVCv~  456 (513)
T KOG2052|consen  419 IARRCESGGIVEEYQLPYYDVVP-------------------------------------SDPSFEEMRK-----VVCVQ  456 (513)
T ss_pred             HHHHhhcCCEehhhcCCcccCCC-------------------------------------CCCCHHHHhc-----ceeec
Confidence            8653          234432221                                     1111111110     00011


Q ss_pred             hhcccccCccc-HHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccC
Q 045790          148 AANERLDSRFD-EQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETT  195 (231)
Q Consensus       148 ~~~~~l~~~~~-~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~  195 (231)
                      -+.|....... .+.+..+.++|+.||..+|..|.|+-.+-..+.....
T Consensus       457 ~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~  505 (513)
T KOG2052|consen  457 KLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN  505 (513)
T ss_pred             ccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence            11222222222 3678889999999999999999999888777766543

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.72  E-value=9.1e-18  Score=136.35  Aligned_cols=136  Identities=18%  Similarity=0.057  Sum_probs=105.4

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCcee-EeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CC
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTI-MLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GR   82 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~-~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~   82 (231)
                      ..|.||..+|.+||.-..+|++|-.+++-+-+....+.. ..-....||++|.+....|+.++|+||||+++||+.+ |+
T Consensus       417 ViHkDiAaRNCvIdd~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~  496 (563)
T KOG1024|consen  417 VIHKDIAARNCVIDDQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGK  496 (563)
T ss_pred             cccchhhhhcceehhheeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCC
Confidence            359999999999999999999999998866544333321 2233558999999999999999999999999999986 89


Q ss_pred             CccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           83 KVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        83 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      .|+...++.                                                    .+..++..+.+-..+-.+.
T Consensus       497 ~PyaeIDPf----------------------------------------------------Em~~ylkdGyRlaQP~NCP  524 (563)
T KOG1024|consen  497 LPYAEIDPF----------------------------------------------------EMEHYLKDGYRLAQPFNCP  524 (563)
T ss_pred             CCccccCHH----------------------------------------------------HHHHHHhccceecCCCCCc
Confidence            999765532                                                    1111222333334445667


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      ..+..+|.-||..+|++||++.|++.+|..
T Consensus       525 DeLf~vMacCWallpeeRPsf~Qlv~cLse  554 (563)
T KOG1024|consen  525 DELFTVMACCWALLPEERPSFSQLVICLSE  554 (563)
T ss_pred             HHHHHHHHHHHhcCcccCCCHHHHHHHHHH
Confidence            788999999999999999999999998864

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.72  E-value=2.2e-18  Score=144.18  Aligned_cols=183  Identities=15%  Similarity=-0.004  Sum_probs=111.0

Q ss_pred             eeecCCCCCCeeeCCC-CcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCC
Q 045790            5 AYSRSPELPPGRGDFN-FNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRK   83 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~   83 (231)
                      ..|-||||.|||++++ ..+||||||.+.....+..   ..+..+..|.|||++.+.+|+...|+||.||.+||+++|+.
T Consensus       557 vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~enei---tPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkI  633 (752)
T KOG0670|consen  557 VLHADIKPDNILVNESKNILKLCDFGSASFASENEI---TPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKI  633 (752)
T ss_pred             eeecccCccceEeccCcceeeeccCccccccccccc---cHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccce
Confidence            3599999999999964 5689999999877654322   23445668999999999999999999999999999999999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhc--------cCCCCCCCchhHHHHHHHhhcchhhhh--hcccc
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVL--------GGSSKNYCPKLVAWVWDLYGERKLLSA--ANERL  153 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l  153 (231)
                      .|.+....+.+..++....-.+..++. -++....-+.        +.+..... .....+..+.+...+...  ..+.+
T Consensus       634 lFpG~TNN~MLrl~me~KGk~p~KmlR-KgqF~dqHFD~d~nf~~~e~D~vT~r-~~~~vm~~vkPtkdl~s~l~~~q~~  711 (752)
T KOG0670|consen  634 LFPGRTNNQMLRLFMELKGKFPNKMLR-KGQFKDQHFDQDLNFLYIEVDKVTER-EKRTVMVNVKPTKDLGSELIAVQRL  711 (752)
T ss_pred             ecCCCCcHHHHHHHHHhcCCCcHHHhh-hcchhhhhcccccceEEEeccccccc-eeEEEecccCcchhHHHHHhccCCC
Confidence            998866554444443322211111110 0000000000        00000000 000000000000011111  11222


Q ss_pred             cCcccHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcc
Q 045790          154 DSRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFE  193 (231)
Q Consensus       154 ~~~~~~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~  193 (231)
                       ..-+......|..|+..|+..||++|.|..++|.|+.++
T Consensus       712 -~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~HpFi~  750 (752)
T KOG0670|consen  712 -PDEQPKIVQQLRDLLDKMLILDPEKRITVNQALKHPFIT  750 (752)
T ss_pred             -CchhHHHHHHHHHHHHHHhccChhhcCCHHHHhcCCccc
Confidence             223345678899999999999999999999999998764

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.70  E-value=1.4e-17  Score=132.61  Aligned_cols=85  Identities=26%  Similarity=0.311  Sum_probs=73.9

Q ss_pred             ecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCccc
Q 045790            7 SRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVIN   86 (231)
Q Consensus         7 ~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~~   86 (231)
                      -||+|..|.|+|.+|++||+|||+|+.-- .......+++||+.|.|||++....|..++|.|.+|+|+|||+.|+.||.
T Consensus       291 YRDlKLENLlLDkDGHIKitDFGLCKE~I-~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFy  369 (516)
T KOG0690|consen  291 YRDLKLENLLLDKDGHIKITDFGLCKEEI-KYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFY  369 (516)
T ss_pred             eeechhhhheeccCCceEeeecccchhcc-cccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCccc
Confidence            48999999999999999999999997532 22334567899999999999988889999999999999999999999998


Q ss_pred             cchhhh
Q 045790           87 RYKAQK   92 (231)
Q Consensus        87 ~~~~~~   92 (231)
                      ..++..
T Consensus       370 n~dh~k  375 (516)
T KOG0690|consen  370 NKDHEK  375 (516)
T ss_pred             ccchhH
Confidence            766543

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.70  E-value=1e-17  Score=147.31  Aligned_cols=138  Identities=19%  Similarity=0.148  Sum_probs=108.9

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhh-----CCCCCCcccHhHHHHHHHHH
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIST-----GRVSKELDVFSFRVVALEIA   79 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-----~~~~~~~Dv~s~G~vl~el~   79 (231)
                      ..|||||-.|||++.++.+|+.|||++..+..+ .....+.+|++.|||||++..     ..|+..+|+||+||+..||-
T Consensus       144 viHRDikG~NiLLT~e~~VKLvDFGvSaQldsT-~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEla  222 (953)
T KOG0587|consen  144 VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDST-VGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMA  222 (953)
T ss_pred             eeeecccCceEEEeccCcEEEeeeeeeeeeecc-cccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhc
Confidence            469999999999999999999999999888653 334567899999999999853     34778899999999999999


Q ss_pred             hCCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccH
Q 045790           80 TGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDE  159 (231)
Q Consensus        80 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  159 (231)
                      -|.+|+.++.+...+-.|-++-+                                                  .....+.
T Consensus       223 dG~PPl~DmHPmraLF~IpRNPP--------------------------------------------------PkLkrp~  252 (953)
T KOG0587|consen  223 EGAPPLCDMHPMRALFLIPRNPP--------------------------------------------------PKLKRPK  252 (953)
T ss_pred             CCCCCccCcchhhhhccCCCCCC--------------------------------------------------ccccchh
Confidence            99999987665433333332222                                                  1112233


Q ss_pred             HHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcc
Q 045790          160 QQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFE  193 (231)
Q Consensus       160 ~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~  193 (231)
                      .-.+.|.+++..|+..|-++||++.++++|+...
T Consensus       253 kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi~  286 (953)
T KOG0587|consen  253 KWSKKFNDFISTCLVKDYEQRPSTEELLKHPFIT  286 (953)
T ss_pred             hHHHHHHHHHHHHHhhccccCcchhhhccCCccc
Confidence            4467789999999999999999999999998654

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.69  E-value=3.4e-17  Score=143.40  Aligned_cols=135  Identities=20%  Similarity=0.173  Sum_probs=107.5

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCC-ceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGP-KTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~   83 (231)
                      .||||..+|||+..-..+|+.|||+++.+...... ......-.+-|||-|.++...|+.++||||||+++||++| |..
T Consensus       820 VHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~  899 (1177)
T KOG1025|consen  820 VHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAK  899 (1177)
T ss_pred             hhhhhhhhheeecCCCeEEEEecchhhccCcccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCC
Confidence            49999999999999999999999999987643322 2222334567999999999999999999999999999987 899


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      |++.....                                                    .+.+++....+-..++.+..
T Consensus       900 Py~gi~~~----------------------------------------------------eI~dlle~geRLsqPpiCti  927 (1177)
T KOG1025|consen  900 PYDGIPAE----------------------------------------------------EIPDLLEKGERLSQPPICTI  927 (1177)
T ss_pred             ccCCCCHH----------------------------------------------------HhhHHHhccccCCCCCCccH
Confidence            99865532                                                    22233334444456677888


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      ++..+|..||..|+..||+++++...+..
T Consensus       928 DVy~~mvkCwmid~~~rp~fkel~~~fs~  956 (1177)
T KOG1025|consen  928 DVYMVMVKCWMIDADSRPTFKELAEEFSR  956 (1177)
T ss_pred             HHHHHHHHHhccCcccCccHHHHHHHHHH
Confidence            99999999999999999999999987654

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.68  E-value=6.5e-18  Score=128.47  Aligned_cols=171  Identities=12%  Similarity=-0.020  Sum_probs=105.6

Q ss_pred             eee-ecCCCCCCeeeCC-CCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCC-CCCCcccHhHHHHHHHHHh
Q 045790            4 VAY-SRSPELPPGRGDF-NFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGR-VSKELDVFSFRVVALEIAT   80 (231)
Q Consensus         4 ~~~-~rdlk~~nil~~~-~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~-~~~~~Dv~s~G~vl~el~~   80 (231)
                      +|. |||+||.|++||. .-.++|+|+|++.+...+...  ...+.+..|..||.+...+ |+...|+||+||++..|+.
T Consensus       151 ~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~eY--nVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miF  228 (338)
T KOG0668|consen  151 MGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY--NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIF  228 (338)
T ss_pred             cCcccccCCcceeeechhhceeeeeecchHhhcCCCcee--eeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHh
Confidence            454 9999999999996 566999999999988765443  3345677899999997765 8999999999999999999


Q ss_pred             CCCccc-cchhhhhhhhccccCCCC-CCcccc---ccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccC
Q 045790           81 GRKVIN-RYKAQKLRTQFVVPHPCS-NTGSVE---KLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDS  155 (231)
Q Consensus        81 g~~p~~-~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  155 (231)
                      .+.||. +.+..+.+.++..-+... ......   ....+..+.+.+..++..                +...+...-..
T Consensus       229 rkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~----------------w~~Fi~~~n~h  292 (338)
T KOG0668|consen  229 RKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKP----------------WSRFINSENQH  292 (338)
T ss_pred             ccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhcccccc----------------HHHhCCccccc
Confidence            887764 344444444443322111 111100   000011111111111110                11111111101


Q ss_pred             cccHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          156 RFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       156 ~~~~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                      -    .....++++..-+.+|-.+|+||+|++.|++|....
T Consensus       293 l----~~peaiDlldklLrYDHqeRlTakEam~HpyF~~~~  329 (338)
T KOG0668|consen  293 L----VSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAPVR  329 (338)
T ss_pred             c----CChHHHHHHHHHHhhccccccchHHHhcCchHHHHH
Confidence            0    113456677777888999999999999999986543

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.67  E-value=1.1e-16  Score=128.08  Aligned_cols=80  Identities=24%  Similarity=0.288  Sum_probs=71.0

Q ss_pred             ecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCccc
Q 045790            7 SRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVIN   86 (231)
Q Consensus         7 ~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~~   86 (231)
                      -||||..|||+|..|.+|++|+|+++.-- ...-.+.+++||+.|.|||++++..|...+|.|++|++++||+.|+.||+
T Consensus       374 yrdlkldnvlldaeghikltdygmcke~l-~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfd  452 (593)
T KOG0695|consen  374 YRDLKLDNVLLDAEGHIKLTDYGMCKEGL-GPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFD  452 (593)
T ss_pred             eeeccccceEEccCCceeecccchhhcCC-CCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcc
Confidence            69999999999999999999999997532 22233567899999999999999999999999999999999999999997


Q ss_pred             c
Q 045790           87 R   87 (231)
Q Consensus        87 ~   87 (231)
                      -
T Consensus       453 i  453 (593)
T KOG0695|consen  453 I  453 (593)
T ss_pred             e
Confidence            4

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.67  E-value=1.4e-16  Score=137.97  Aligned_cols=81  Identities=14%  Similarity=0.076  Sum_probs=60.0

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCC----------------------CC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGR----------------------VS   63 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~----------------------~~   63 (231)
                      .||||||.||+++.++.+||+|||++..+............+++.|++||.+....                      ..
T Consensus       331 vHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~  410 (507)
T PLN03224        331 VHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRP  410 (507)
T ss_pred             ecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCC
Confidence            59999999999999999999999998765432221122233467899999874321                      11


Q ss_pred             CCcccHhHHHHHHHHHhCCC-ccc
Q 045790           64 KELDVFSFRVVALEIATGRK-VIN   86 (231)
Q Consensus        64 ~~~Dv~s~G~vl~el~~g~~-p~~   86 (231)
                      .+.|+||+||++++|+++.. ||.
T Consensus       411 ~~~DvwSlGvil~em~~~~l~p~~  434 (507)
T PLN03224        411 DLFDSYTAGVLLMQMCVPELRPVA  434 (507)
T ss_pred             CccchhhHHHHHHHHHhCCCCCcc
Confidence            34699999999999999874 664

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.64  E-value=2.6e-16  Score=129.96  Aligned_cols=143  Identities=20%  Similarity=0.170  Sum_probs=98.6

Q ss_pred             eeecCCCCCCeeeCC---CCcEEEeccccccccCCCCCC------ceeEeeccccccchhhhhhC----CCCCCcccHhH
Q 045790            5 AYSRSPELPPGRGDF---NFNAKLGDFGLARLMDHELGP------KTIMLVGTLAYMASEYISTG----RVSKELDVFSF   71 (231)
Q Consensus         5 ~~~rdlk~~nil~~~---~~~~kl~Dfg~~~~~~~~~~~------~~~~~~g~~~y~aPE~~~~~----~~~~~~Dv~s~   71 (231)
                      -.|=||||.|||+-.   -|.+||+|||+++.+......      .+....||++|.+||.+..+    .++.++||||+
T Consensus       591 IIHYDLKPgNILLv~GtacGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSv  670 (775)
T KOG1151|consen  591 IIHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSV  670 (775)
T ss_pred             eeeeccCCccEEEecCcccceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEee
Confidence            358999999998853   467999999999998754332      13456799999999998654    37899999999


Q ss_pred             HHHHHHHHhCCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcc
Q 045790           72 RVVALEIATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANE  151 (231)
Q Consensus        72 G~vl~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (231)
                      |+++|..++|+.||......                                      .++..       ...++....-
T Consensus       671 GVIFyQClYGrKPFGhnqsQ--------------------------------------QdILq-------eNTIlkAtEV  705 (775)
T KOG1151|consen  671 GVIFYQCLYGRKPFGHNQSQ--------------------------------------QDILQ-------ENTILKATEV  705 (775)
T ss_pred             ehhhhhhhccCCCCCCchhH--------------------------------------HHHHh-------hhchhcceec
Confidence            99999999999999754321                                      01111       0111111111


Q ss_pred             cccCcccHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          152 RLDSRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       152 ~l~~~~~~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      .+....  -.......++++||++.-++|....+|..++++..
T Consensus       706 qFP~KP--vVsseAkaFIRRCLaYRKeDR~DV~qLA~dpyllP  746 (775)
T KOG1151|consen  706 QFPPKP--VVSSEAKAFIRRCLAYRKEDRIDVQQLACDPYLLP  746 (775)
T ss_pred             cCCCCC--ccCHHHHHHHHHHHHhhhhhhhhHHHHccCccccc
Confidence            111100  11223456789999999999999999988887654

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.64  E-value=1.1e-16  Score=136.29  Aligned_cols=136  Identities=18%  Similarity=0.142  Sum_probs=104.2

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCC-CCCcccHhHHHHHHHHHhCCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRV-SKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      .|||||++|||++.+..+||+|||++..+..  .....+.+|++.|.|||+..+..+ .+.+|+|++|+++|.++.|..|
T Consensus       177 vHrdLk~eNilL~~~mnikIaDfgfS~~~~~--~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLP  254 (596)
T KOG0586|consen  177 VHRDLKAENILLDENMNIKIADFGFSTFFDY--GLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLP  254 (596)
T ss_pred             eccccchhhcccccccceeeeccccceeecc--cccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccc
Confidence            4999999999999999999999999988753  344567899999999999988775 6789999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCc--ccHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSR--FDEQQM  162 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~  162 (231)
                      |++..-...                                                       -++.+...  .+....
T Consensus       255 FDG~~lk~L-------------------------------------------------------r~rvl~gk~rIp~~ms  279 (596)
T KOG0586|consen  255 FDGQNLKEL-------------------------------------------------------RPRVLRGKYRIPFYMS  279 (596)
T ss_pred             cCCcccccc-------------------------------------------------------cchheeeeecccceee
Confidence            986542200                                                       00111111  111122


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCCCC
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTMPN  198 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~~~  198 (231)
                      ..+-.++++++..+|.+|+++.+++.+.|-......
T Consensus       280 ~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~~~~~  315 (596)
T KOG0586|consen  280 CDCEDLLRKFLVLNPSKRGPCDQIMKDRWRNDLLEA  315 (596)
T ss_pred             chhHHHHHHhhccCccccCCHHHhhhhcccchhhhh
Confidence            345667888889999999999999999987655444

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.62  E-value=2e-15  Score=119.99  Aligned_cols=154  Identities=16%  Similarity=0.127  Sum_probs=97.6

Q ss_pred             ecCCCCCCeeeCCCC---cEEEeccccccccCCCCC------CceeEeeccccccchhhhhh-----CCCCCCcccHhHH
Q 045790            7 SRSPELPPGRGDFNF---NAKLGDFGLARLMDHELG------PKTIMLVGTLAYMASEYIST-----GRVSKELDVFSFR   72 (231)
Q Consensus         7 ~rdlk~~nil~~~~~---~~kl~Dfg~~~~~~~~~~------~~~~~~~g~~~y~aPE~~~~-----~~~~~~~Dv~s~G   72 (231)
                      |||+||.|||.....   -+||+||.+...+..+..      ....+.+|+..|||||+...     .-|+.++|.||+|
T Consensus       199 HRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLG  278 (463)
T KOG0607|consen  199 HRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLG  278 (463)
T ss_pred             cccCCccceeecCCCCcCceeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHH
Confidence            999999999997543   379999987755432211      12345688899999998731     2478999999999


Q ss_pred             HHHHHHHhCCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhccc
Q 045790           73 VVALEIATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANER  152 (231)
Q Consensus        73 ~vl~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (231)
                      +++|-|++|++||.+.-..+|.                   |.      .|   ..+..-...+-         +.++..
T Consensus       279 vIlYImLsGYpPFvG~Cg~dCG-------------------Wd------rG---e~Cr~CQ~~LF---------esIQEG  321 (463)
T KOG0607|consen  279 VILYIMLSGYPPFVGHCGADCG-------------------WD------RG---EVCRVCQNKLF---------ESIQEG  321 (463)
T ss_pred             HHHHHHHhCCCCccCccCCcCC-------------------cc------CC---CccHHHHHHHH---------HHHhcc
Confidence            9999999999999865432110                   00      00   11111111111         111111


Q ss_pred             ccCcccHHHHHH----HHHHHHhhcCCCCCCCCCHHHHHHHHhcccCCCC
Q 045790          153 LDSRFDEQQMTC----LLIVGLWCAHPDRCFRPSIRQAIQVLNFETTMPN  198 (231)
Q Consensus       153 l~~~~~~~~~~~----~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~~~  198 (231)
                      . ..++..+...    ..+++..-+..|+.+|.++.++++|++.....++
T Consensus       322 k-YeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~~~~e  370 (463)
T KOG0607|consen  322 K-YEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQRCAPE  370 (463)
T ss_pred             C-CcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCccccccchh
Confidence            1 2334333222    2334445556899999999999999999776655

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.59  E-value=3.7e-16  Score=129.95  Aligned_cols=168  Identities=18%  Similarity=0.128  Sum_probs=108.4

Q ss_pred             CCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCccccchhhhhhhhccc
Q 045790           20 NFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVINRYKAQKLRTQFVV   99 (231)
Q Consensus        20 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~~~~~~~~~~~~~~~   99 (231)
                      ...+||+|||=+++...    .-...+.|..|++||++.+..|+..+||||++|+++||.||-..|.......+..    
T Consensus       390 di~vKIaDlGNACW~~k----hFT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~r----  461 (590)
T KOG1290|consen  390 DIRVKIADLGNACWVHK----HFTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENYSR----  461 (590)
T ss_pred             ceeEEEeeccchhhhhh----hhchhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCc----
Confidence            34689999998887532    1233567889999999999999999999999999999999999887654321110    


Q ss_pred             cCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcc--hhhhhhcccccCcccHHHHHHHHHHHHhhcCCCC
Q 045790          100 PHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGER--KLLSAANERLDSRFDEQQMTCLLIVGLWCAHPDR  177 (231)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~l~~~c~~~dp  177 (231)
                       .......+++.++..+.....+|+.....-+-...+.++..-.  .+.+++-..  ..+..+++..|.+|+.=||+.+|
T Consensus       462 -DEDHiA~i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eK--Y~~s~e~A~~fsdFL~PmLef~P  538 (590)
T KOG1290|consen  462 -DEDHIALIMELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEK--YEWSEEDAQQFSDFLSPMLEFDP  538 (590)
T ss_pred             -cHHHHHHHHHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHH--hCCCHHHHHHHHHHHHHHHhcCc
Confidence             1111223344445555555444433211100000000000000  111222222  35778999999999999999999


Q ss_pred             CCCCCHHHHHHHHhcccCCCC
Q 045790          178 CFRPSIRQAIQVLNFETTMPN  198 (231)
Q Consensus       178 ~~Rps~~ell~~l~~~~~~~~  198 (231)
                      ++||||.+.++|+|.....-+
T Consensus       539 eKR~tA~~cl~hPwLn~~~~~  559 (590)
T KOG1290|consen  539 EKRPTAAQCLKHPWLNPVAGP  559 (590)
T ss_pred             cccccHHHHhcCccccCCCCC
Confidence            999999999999998765543

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.56  E-value=6.2e-15  Score=132.88  Aligned_cols=138  Identities=13%  Similarity=0.051  Sum_probs=93.9

Q ss_pred             cCCCCC-CeeeCCCCcEEEeccccccccCCCCC-CceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            8 RSPELP-PGRGDFNFNAKLGDFGLARLMDHELG-PKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         8 rdlk~~-nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      ++.+|. |++++.....++.|||.++....+.. ......+||..|+|||++.+..++.++||||+||++||+++|..||
T Consensus       501 ~~~~p~~~~~~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~vGT~~Y~APE~l~~~~~~~~~DiwSlG~il~ElltG~~pf  580 (669)
T cd05610         501 QKPRPHGNLYQTPKQVKIGTPYRTPKSVRRGAAPVEGERILGTPDYLAPELLLGKPHGPAVDWWALGVCLFEFLTGIPPF  580 (669)
T ss_pred             CCCCCCCceeECCccccccccCCCchhhhcccccccCCceeeCccccCHHHcCCCCCCcHHHHHHHHHHHHHHHHCCCCC
Confidence            444555 55666666678889998866532211 1223468999999999998888999999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      ...........+                                          .... +   ..+.    ........+
T Consensus       581 ~~~~~~~~~~~i------------------------------------------l~~~-~---~~p~----~~~~~~~~~  610 (669)
T cd05610         581 NDETPQQVFQNI------------------------------------------LNRD-I---PWPE----GEEKLSVNA  610 (669)
T ss_pred             CCCCHHHHHHHH------------------------------------------HhcC-C---CCCc----ccccCCHHH
Confidence            754432111111                                          0000 0   0000    001122345


Q ss_pred             HHHHHhhcCCCCCCCCCHHHHHHHHhcccC
Q 045790          166 LIVGLWCAHPDRCFRPSIRQAIQVLNFETT  195 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps~~ell~~l~~~~~  195 (231)
                      ..++.+||..||++||++.++++|.++...
T Consensus       611 ~~~l~~lL~~dP~~R~ta~e~l~h~~~~~~  640 (669)
T cd05610         611 QNAIEILLTMDPTKRAGLKELKQHPLFHGV  640 (669)
T ss_pred             HHHHHHHcccChhHCcCHHHHHhCHhhcCC
Confidence            678888999999999999999999998553

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.50  E-value=2.5e-14  Score=123.81  Aligned_cols=83  Identities=28%  Similarity=0.271  Sum_probs=70.1

Q ss_pred             eecCCCCCCeeeC--CCC--cEEEeccccccccCCCCCCceeEeeccccccchhhhh-hCCCCCCcccHhHHHHHHHHHh
Q 045790            6 YSRSPELPPGRGD--FNF--NAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIS-TGRVSKELDVFSFRVVALEIAT   80 (231)
Q Consensus         6 ~~rdlk~~nil~~--~~~--~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~-~~~~~~~~Dv~s~G~vl~el~~   80 (231)
                      .||||||.||++-  .+|  .-||+|||.++.+.++.  ...+.+||..|.+||... ++.|+..+|.|||||++|+..|
T Consensus       142 vHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~s--~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caT  219 (732)
T KOG4250|consen  142 VHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDNS--LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECAT  219 (732)
T ss_pred             eeccCCCCcEEEeecCCCceEEeeecccccccCCCCC--eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhc
Confidence            3999999999874  223  36999999999887543  567889999999999997 4778999999999999999999


Q ss_pred             CCCccccchh
Q 045790           81 GRKVINRYKA   90 (231)
Q Consensus        81 g~~p~~~~~~   90 (231)
                      |..||-....
T Consensus       220 G~lPF~p~~~  229 (732)
T KOG4250|consen  220 GELPFIPFGG  229 (732)
T ss_pred             cCCCCCcCCC
Confidence            9999976543

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.48  E-value=1.2e-14  Score=128.39  Aligned_cols=147  Identities=19%  Similarity=0.101  Sum_probs=100.5

Q ss_pred             ee-eecCCCCCCeeeCCCCcEEEeccccccccCCCCC---CceeEeeccccccchhhhhhCCCCCC-cccHhHHHHHHHH
Q 045790            4 VA-YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELG---PKTIMLVGTLAYMASEYISTGRVSKE-LDVFSFRVVALEI   78 (231)
Q Consensus         4 ~~-~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~~g~~~y~aPE~~~~~~~~~~-~Dv~s~G~vl~el   78 (231)
                      .| .|||+|++|+++..++.+|++|||.+........   ......+|+..|+|||++.+..|.+. .||||.|+++..|
T Consensus       439 ~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m  518 (601)
T KOG0590|consen  439 MGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICM  518 (601)
T ss_pred             cCceeccCccccEEEecCCceEEeecCcceeeccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEE
Confidence            45 5999999999999999999999998865432222   22345788999999999988888655 9999999999999


Q ss_pred             HhCCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCccc
Q 045790           79 ATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFD  158 (231)
Q Consensus        79 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  158 (231)
                      ++|+.||..-...+..  +        ...                  ..    ..|...            ..-....-
T Consensus       519 ~~~~~~Wk~a~~~~~~--~--------~~~------------------~~----~~~~~~------------~~~~~~~~  554 (601)
T KOG0590|consen  519 ILGRFPWKVAKKSDNS--F--------KTN------------------NY----SDQRNI------------FEGPNRLL  554 (601)
T ss_pred             ecCCCccccccccccc--h--------hhh------------------cc----cccccc------------ccChHHHH
Confidence            9999888643211000  0        000                  00    000000            00000001


Q ss_pred             HHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          159 EQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       159 ~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      .....+...++.++++.||.+|.|+.+|++..|+..
T Consensus       555 ~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~  590 (601)
T KOG0590|consen  555 SLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRS  590 (601)
T ss_pred             HhchhhHHHHHHHHccCChhheecHHHHhhChHhhh
Confidence            122334567899999999999999999999999854

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.48  E-value=5.9e-14  Score=109.48  Aligned_cols=78  Identities=24%  Similarity=0.229  Sum_probs=59.1

Q ss_pred             eeecCCCCCCeee-CCCC-cEEEeccccccccCCCCCCceeEeeccccccchhhhhh-----CCCCCCcccHhHHHHHHH
Q 045790            5 AYSRSPELPPGRG-DFNF-NAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIST-----GRVSKELDVFSFRVVALE   77 (231)
Q Consensus         5 ~~~rdlk~~nil~-~~~~-~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-----~~~~~~~Dv~s~G~vl~e   77 (231)
                      ..|||||.+|||| +.++ .+||+|||+++..+......    .-+.-|.+||.+..     ....+..|+|.|||+++.
T Consensus       142 lVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV~~~----~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~  217 (378)
T KOG1345|consen  142 LVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTTVKYL----EYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFY  217 (378)
T ss_pred             hhhcccccceEEEecCCccEEEeeecccccccCceehhh----hhhcccCCcHHHhhccccceEecccccchheeeeeee
Confidence            4599999999998 3444 69999999997765322211    22345888987632     234677999999999999


Q ss_pred             HHhCCCccc
Q 045790           78 IATGRKVIN   86 (231)
Q Consensus        78 l~~g~~p~~   86 (231)
                      .++|+.|++
T Consensus       218 cltG~~PWQ  226 (378)
T KOG1345|consen  218 CLTGKFPWQ  226 (378)
T ss_pred             eecCCCcch
Confidence            999999997

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.47  E-value=4e-14  Score=121.87  Aligned_cols=140  Identities=14%  Similarity=0.097  Sum_probs=99.8

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhh---hCCCCCCcccHhHHHHHHHHHhC
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIS---TGRVSKELDVFSFRVVALEIATG   81 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~s~G~vl~el~~g   81 (231)
                      +.|||||-.||+++..+.+|++|||.+-.++. .......++|++.|||||+..   .+.|+..+|+|+.|+...|+-.-
T Consensus       133 k~hRdiKGanilltd~gDvklaDfgvsaqita-ti~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eL  211 (829)
T KOG0576|consen  133 KIHRDIKGANILLTDEGDVKLADFGVSAQITA-TIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGEL  211 (829)
T ss_pred             cccccccccceeecccCceeecccCchhhhhh-hhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhc
Confidence            47999999999999999999999999877653 233456789999999999873   45689999999999999998887


Q ss_pred             CCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHH
Q 045790           82 RKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQ  161 (231)
Q Consensus        82 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  161 (231)
                      ++|.....+...+....                                           .+.   ...+.+..  ...-
T Consensus       212 qpplfdlhpmr~l~LmT-------------------------------------------kS~---~qpp~lkD--k~kw  243 (829)
T KOG0576|consen  212 QPPLFDLHPMRALFLMT-------------------------------------------KSG---FQPPTLKD--KTKW  243 (829)
T ss_pred             CCcccccchHHHHHHhh-------------------------------------------ccC---CCCCcccC--Cccc
Confidence            77765432210000000                                           000   00111111  1123


Q ss_pred             HHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcc
Q 045790          162 MTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFE  193 (231)
Q Consensus       162 ~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~  193 (231)
                      ...|.+|++.|+..+|.+|||+..+++|.--.
T Consensus       244 s~~fh~fvK~altknpKkRptaeklL~h~fvs  275 (829)
T KOG0576|consen  244 SEFFHNFVKGALTKNPKKRPTAEKLLQHPFVS  275 (829)
T ss_pred             hHHHHHHHHHHhcCCCccCCChhhheeceeec
Confidence            56688999999999999999999988865433

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.46  E-value=4.8e-15  Score=124.80  Aligned_cols=80  Identities=26%  Similarity=0.306  Sum_probs=69.6

Q ss_pred             eecCCCCCCeeeCCC--C-cEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCC
Q 045790            6 YSRSPELPPGRGDFN--F-NAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGR   82 (231)
Q Consensus         6 ~~rdlk~~nil~~~~--~-~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~   82 (231)
                      .|-||||+|||+...  | .+||+|||+++..+...-  ..+.+||+.|.|||+++...|+...|+||.|+++|..++|.
T Consensus       686 vHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksF--RrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGT  763 (888)
T KOG4236|consen  686 VHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSF--RRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGT  763 (888)
T ss_pred             eeccCCchheeeccCCCCCceeeccccceeecchhhh--hhhhcCCccccCHHHHhhccccccccceeeeEEEEEEeccc
Confidence            488999999999753  3 589999999999875322  35678999999999999999999999999999999999999


Q ss_pred             Ccccc
Q 045790           83 KVINR   87 (231)
Q Consensus        83 ~p~~~   87 (231)
                      .||..
T Consensus       764 FPFNE  768 (888)
T KOG4236|consen  764 FPFNE  768 (888)
T ss_pred             ccCCC
Confidence            99964

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.45  E-value=2e-13  Score=104.55  Aligned_cols=73  Identities=32%  Similarity=0.373  Sum_probs=58.8

Q ss_pred             eeecCCCCCCeeeCC-CCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhC-CCCCCcccHhHHHHHHHH
Q 045790            5 AYSRSPELPPGRGDF-NFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTG-RVSKELDVFSFRVVALEI   78 (231)
Q Consensus         5 ~~~rdlk~~nil~~~-~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~el   78 (231)
                      .+|+||++.||+++. ++.++++|||.+........ ......+...|++||.+... ..+.+.|+|++|++++++
T Consensus       113 ~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l  187 (215)
T cd00180         113 IIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS-LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL  187 (215)
T ss_pred             eeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc-hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH
Confidence            469999999999998 89999999999876543221 12234567789999998776 678889999999999997

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.45  E-value=2.5e-14  Score=117.09  Aligned_cols=82  Identities=22%  Similarity=0.211  Sum_probs=62.4

Q ss_pred             eecCCCCCCeeeCC-CCcEEEeccccccccCC-------CC-------C----------------C-------------c
Q 045790            6 YSRSPELPPGRGDF-NFNAKLGDFGLARLMDH-------EL-------G----------------P-------------K   41 (231)
Q Consensus         6 ~~rdlk~~nil~~~-~~~~kl~Dfg~~~~~~~-------~~-------~----------------~-------------~   41 (231)
                      .||||||.|+|.+. .+.-.|.|||++.....       ..       .                .             .
T Consensus       154 vHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~  233 (418)
T KOG1167|consen  154 VHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSE  233 (418)
T ss_pred             cccCCCccccccccccCCceEEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccce
Confidence            49999999999985 45678999999862100       00       0                0             0


Q ss_pred             eeEeeccccccchhhhhhCC-CCCCcccHhHHHHHHHHHhCCCcccc
Q 045790           42 TIMLVGTLAYMASEYISTGR-VSKELDVFSFRVVALEIATGRKVINR   87 (231)
Q Consensus        42 ~~~~~g~~~y~aPE~~~~~~-~~~~~Dv~s~G~vl~el~~g~~p~~~   87 (231)
                      .....||++|+|||++...+ -+.++||||.|++++.++++..||..
T Consensus       234 ~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~Lslls~~~PFf~  280 (418)
T KOG1167|consen  234 RANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILLSLLSRRYPFFK  280 (418)
T ss_pred             ecccCCCCCCCchHHHhhccCcCCccceeeccceeehhhcccccccc
Confidence            11246999999999997655 68899999999999999999988854

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.38  E-value=2e-13  Score=116.04  Aligned_cols=78  Identities=23%  Similarity=0.209  Sum_probs=68.1

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCC-CCCcccHhHHHHHHHHHhCCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRV-SKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      .|||||.+||.++.+|.+||+|||.+.....+   .-..++||..|.|||++.+..| ....|||++|+++|.++....|
T Consensus       692 vhrdikdenvivd~~g~~klidfgsaa~~ksg---pfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenp  768 (772)
T KOG1152|consen  692 VHRDIKDENVIVDSNGFVKLIDFGSAAYTKSG---PFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENP  768 (772)
T ss_pred             eecccccccEEEecCCeEEEeeccchhhhcCC---CcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCC
Confidence            49999999999999999999999998775543   2357899999999999988876 5559999999999999999988


Q ss_pred             cc
Q 045790           85 IN   86 (231)
Q Consensus        85 ~~   86 (231)
                      |.
T Consensus       769 yy  770 (772)
T KOG1152|consen  769 YY  770 (772)
T ss_pred             Cc
Confidence            84

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=99.37  E-value=3.8e-13  Score=113.36  Aligned_cols=79  Identities=24%  Similarity=0.302  Sum_probs=66.2

Q ss_pred             ecCCCCCCeeeCCCCcEEEeccccccccCCCC-----CCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-
Q 045790            7 SRSPELPPGRGDFNFNAKLGDFGLARLMDHEL-----GPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-   80 (231)
Q Consensus         7 ~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~-----~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-   80 (231)
                      |||+||.||+...+..+||.|||+........     ........|+.+||+||.+.+.+|+.++|||++|++++|++. 
T Consensus       379 hrdlkp~nif~~~d~q~kIgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~  458 (516)
T KOG1033|consen  379 HRDLKPSNIFFSDDDQLKIGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQ  458 (516)
T ss_pred             hhhccccccccccchhhhhhhhhheeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHH
Confidence            99999999999988899999999986554322     112456789999999999999999999999999999999987 


Q ss_pred             CCCcc
Q 045790           81 GRKVI   85 (231)
Q Consensus        81 g~~p~   85 (231)
                      -...+
T Consensus       459 f~T~~  463 (516)
T KOG1033|consen  459 FSTQF  463 (516)
T ss_pred             hccHH
Confidence            44444

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.33  E-value=2.7e-12  Score=99.89  Aligned_cols=83  Identities=24%  Similarity=0.312  Sum_probs=68.2

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhh-hhCCCCCCcccHhHHHHHHHHHhCCC
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYI-STGRVSKELDVFSFRVVALEIATGRK   83 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~-~~~~~~~~~Dv~s~G~vl~el~~g~~   83 (231)
                      .+|+|+++.||+++.++.++|+|||.+...............+...|++||.+ ....++.++|+|++|++++++++|+.
T Consensus       119 i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~  198 (225)
T smart00221      119 IVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPE  198 (225)
T ss_pred             eecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCC
Confidence            36999999999999999999999999877653321122345667789999998 55567789999999999999999999


Q ss_pred             cccc
Q 045790           84 VINR   87 (231)
Q Consensus        84 p~~~   87 (231)
                      ||..
T Consensus       199 pf~~  202 (225)
T smart00221      199 PFSG  202 (225)
T ss_pred             Cccc
Confidence            9976

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=99.33  E-value=2.2e-12  Score=110.05  Aligned_cols=149  Identities=18%  Similarity=0.157  Sum_probs=98.9

Q ss_pred             eeeeecCCCCCCeeeCCCCcEEEeccccccccCCCCC-CceeEeeccccccchhhhhhCC-------CCCCcccHhHHHH
Q 045790            3 EVAYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELG-PKTIMLVGTLAYMASEYISTGR-------VSKELDVFSFRVV   74 (231)
Q Consensus         3 ~~~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~-------~~~~~Dv~s~G~v   74 (231)
                      .++||.-++.+|.++|.++.+|++|||+......... .......-...|.|||.++...       .+.+.|+||||++
T Consensus        68 ~i~~hg~l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii  147 (484)
T KOG1023|consen   68 PIGYHGALKSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGII  147 (484)
T ss_pred             cceeeeeeccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHH
Confidence            3579999999999999999999999999877642111 1111222345799999987531       3566999999999


Q ss_pred             HHHHHhCCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhccccc
Q 045790           75 ALEIATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLD  154 (231)
Q Consensus        75 l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  154 (231)
                      ++|+++.+.||......                                   .....+...+..     .....+-|.+.
T Consensus       148 ~~ei~~r~~~~~~~~~~-----------------------------------~~~~eii~~~~~-----~~~~~~rP~i~  187 (484)
T KOG1023|consen  148 MYEILFRSGPFDLRNLV-----------------------------------EDPDEIILRVKK-----GGSNPFRPSIE  187 (484)
T ss_pred             HHHHHhccCcccccccc-----------------------------------CChHHHHHHHHh-----cCCCCcCcchh
Confidence            99999999999764311                                   111122232222     01111111111


Q ss_pred             CcccHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcc
Q 045790          155 SRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFE  193 (231)
Q Consensus       155 ~~~~~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~  193 (231)
                      ...  +....++.++..||..+|+.||++.++-..+...
T Consensus       188 ~~~--e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~  224 (484)
T KOG1023|consen  188 LLN--ELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTI  224 (484)
T ss_pred             hhh--hcchHHHHHHHHhcccChhhCccHHHHHhhhhhh
Confidence            100  2223688999999999999999999998777643

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.29  E-value=3.6e-12  Score=99.78  Aligned_cols=127  Identities=14%  Similarity=0.111  Sum_probs=91.3

Q ss_pred             CCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCC---CCCcccHhHHHHHHHHHhCCCccc
Q 045790           10 PELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRV---SKELDVFSFRVVALEIATGRKVIN   86 (231)
Q Consensus        10 lk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~---~~~~Dv~s~G~vl~el~~g~~p~~   86 (231)
                      |.+..|++|++..++|+ .+-+++.-     ........+.|++||.++..+-   -.++|+|||++++||+.+...||.
T Consensus       317 lns~hvmidedltaris-mad~kfsf-----qe~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfa  390 (448)
T KOG0195|consen  317 LNSKHVMIDEDLTARIS-MADTKFSF-----QEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFA  390 (448)
T ss_pred             cccceEEecchhhhhee-cccceeee-----eccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccc
Confidence            56678899988887764 22222211     1122344678999999976542   356999999999999999999997


Q ss_pred             cchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHHH
Q 045790           87 RYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCLL  166 (231)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  166 (231)
                      ...+.                                                   +.-.++.-+.++...++.-...+.
T Consensus       391 dlspm---------------------------------------------------ecgmkialeglrv~ippgis~hm~  419 (448)
T KOG0195|consen  391 DLSPM---------------------------------------------------ECGMKIALEGLRVHIPPGISRHMN  419 (448)
T ss_pred             cCCch---------------------------------------------------hhhhhhhhccccccCCCCccHHHH
Confidence            65432                                                   112233345666666666677888


Q ss_pred             HHHHhhcCCCCCCCCCHHHHHHHHhcc
Q 045790          167 IVGLWCAHPDRCFRPSIRQAIQVLNFE  193 (231)
Q Consensus       167 ~l~~~c~~~dp~~Rps~~ell~~l~~~  193 (231)
                      +++..|++.||.+||.+..++-.|+..
T Consensus       420 klm~icmnedpgkrpkfdmivpilekm  446 (448)
T KOG0195|consen  420 KLMNICMNEDPGKRPKFDMIVPILEKM  446 (448)
T ss_pred             HHHHHHhcCCCCcCCCcceehhhHHHh
Confidence            999999999999999999999888754

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.27  E-value=6.6e-12  Score=113.41  Aligned_cols=103  Identities=19%  Similarity=0.110  Sum_probs=84.9

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCC--------------CceeEeeccccccchhhhhhCCCCCCcccHh
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELG--------------PKTIMLVGTLAYMASEYISTGRVSKELDVFS   70 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~--------------~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s   70 (231)
                      .+|||+|++|.+|+.-|.+|++|||+++.......              ......+||+.|.|||++.-..|...+|.|+
T Consensus       164 ivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwa  243 (1205)
T KOG0606|consen  164 IVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWA  243 (1205)
T ss_pred             eecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHH
Confidence            46999999999999999999999999865321111              1123458999999999998888999999999


Q ss_pred             HHHHHHHHHhCCCccccchhhhhhhhccccCCCCCCc
Q 045790           71 FRVVALEIATGRKVINRYKAQKLRTQFVVPHPCSNTG  107 (231)
Q Consensus        71 ~G~vl~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  107 (231)
                      +|+++|+.+.|+.||.+..+++++...+.....++..
T Consensus       244 mGiIlyeFLVgcvpffGdtpeelfg~visd~i~wpE~  280 (1205)
T KOG0606|consen  244 MGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEE  280 (1205)
T ss_pred             HHHHHHHHheeeeeccCCCHHHHHhhhhhhhcccccc
Confidence            9999999999999999998888888777766655443

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.09  E-value=3.7e-10  Score=91.77  Aligned_cols=84  Identities=27%  Similarity=0.243  Sum_probs=68.9

Q ss_pred             eeecCCCCCCeeeCCCC-cEEEeccccccccCCCCCC-----ceeEeeccccccchhhhhh---CCCCCCcccHhHHHHH
Q 045790            5 AYSRSPELPPGRGDFNF-NAKLGDFGLARLMDHELGP-----KTIMLVGTLAYMASEYIST---GRVSKELDVFSFRVVA   75 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~-~~kl~Dfg~~~~~~~~~~~-----~~~~~~g~~~y~aPE~~~~---~~~~~~~Dv~s~G~vl   75 (231)
                      ..|||+||.||+++... .++++|||.+.........     ......|+..|++||.+.+   .......|+|++|+++
T Consensus       122 ~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~  201 (384)
T COG0515         122 IIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITL  201 (384)
T ss_pred             eeccCCCHHHeeecCCCCeEEEeccCcceecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHH
Confidence            46999999999999888 7999999998755432221     2356688999999999977   4678899999999999


Q ss_pred             HHHHhCCCccccc
Q 045790           76 LEIATGRKVINRY   88 (231)
Q Consensus        76 ~el~~g~~p~~~~   88 (231)
                      ++++.+..||...
T Consensus       202 ~~~~~~~~p~~~~  214 (384)
T COG0515         202 YELLTGLPPFEGE  214 (384)
T ss_pred             HHHHhCCCCCCCC
Confidence            9999999996543

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.08  E-value=2.5e-10  Score=98.41  Aligned_cols=74  Identities=31%  Similarity=0.322  Sum_probs=64.5

Q ss_pred             ecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCccc
Q 045790            7 SRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVIN   86 (231)
Q Consensus         7 ~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~~   86 (231)
                      +||+|++||+++.+|.+++.|||+++..-..     ...+|+..|||||++.  ....++|.||+|++.+++++|..||.
T Consensus       120 yrd~k~enilld~~Ghi~~tdfglske~v~~-----~~~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~  192 (612)
T KOG0603|consen  120 YRDYKLENVLLLLEGHIKLTDFGLSKEAVKE-----KIACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFG  192 (612)
T ss_pred             HhcccccceeecccCccccCCchhhhHhHhh-----hhcccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCc
Confidence            7999999999999999999999999865321     1128899999999987  45678999999999999999999998


Q ss_pred             c
Q 045790           87 R   87 (231)
Q Consensus        87 ~   87 (231)
                      .
T Consensus       193 ~  193 (612)
T KOG0603|consen  193 G  193 (612)
T ss_pred             h
Confidence            7

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=99.02  E-value=2.3e-10  Score=104.15  Aligned_cols=82  Identities=16%  Similarity=0.059  Sum_probs=56.7

Q ss_pred             eecCCCCCCeeeCCCCcEEEecccccccc--CCCCCCce----eEeeccccccchhhhhhC----------C-CCCCccc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLM--DHELGPKT----IMLVGTLAYMASEYISTG----------R-VSKELDV   68 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~--~~~~~~~~----~~~~g~~~y~aPE~~~~~----------~-~~~~~Dv   68 (231)
                      -|.|||.+||||+.=.=+.|+||..-+..  ..+....-    .+...-..|.|||.+...          . ..++-||
T Consensus       142 cHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDI  221 (1431)
T KOG1240|consen  142 CHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDI  221 (1431)
T ss_pred             cccccccceEEEeeechhhhhcccccCCccCCCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhh
Confidence            49999999999997666889999754432  21111111    112223479999987431          2 5678999


Q ss_pred             HhHHHHHHHHHh-CCCcccc
Q 045790           69 FSFRVVALEIAT-GRKVINR   87 (231)
Q Consensus        69 ~s~G~vl~el~~-g~~p~~~   87 (231)
                      ||.||++.|+++ |.++|..
T Consensus       222 FS~GCViaELf~Eg~PlF~L  241 (1431)
T KOG1240|consen  222 FSAGCVIAELFLEGRPLFTL  241 (1431)
T ss_pred             hhhhHHHHHHHhcCCCcccH
Confidence            999999999986 6888853

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=98.99  E-value=3.9e-10  Score=90.77  Aligned_cols=81  Identities=14%  Similarity=0.000  Sum_probs=55.3

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhC--------CCCCCcccHhHHHHHH
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTG--------RVSKELDVFSFRVVAL   76 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~--------~~~~~~Dv~s~G~vl~   76 (231)
                      ..|.|||++|++++.+|.+.|+||+.....+..    ......+..|.+||.....        .++.+.|.|++|+++|
T Consensus       166 lVHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~~----~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly  241 (288)
T PF14531_consen  166 LVHGDIKPENFLLDQDGGVFLGDFSSLVRAGTR----YRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLY  241 (288)
T ss_dssp             EEEST-SGGGEEE-TTS-EEE--GGGEEETTEE----EEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHH
T ss_pred             eEecccceeeEEEcCCCCEEEcChHHHeecCce----eeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHH
Confidence            469999999999999999999999876554321    1112334679999987442        3678899999999999


Q ss_pred             HHHhCCCccccch
Q 045790           77 EIATGRKVINRYK   89 (231)
Q Consensus        77 el~~g~~p~~~~~   89 (231)
                      .+..+..||....
T Consensus       242 ~lWC~~lPf~~~~  254 (288)
T PF14531_consen  242 SLWCGRLPFGLSS  254 (288)
T ss_dssp             HHHHSS-STCCCG
T ss_pred             HHHHccCCCCCCC
Confidence            9999999997554

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=98.95  E-value=2.8e-09  Score=87.79  Aligned_cols=82  Identities=18%  Similarity=0.093  Sum_probs=57.6

Q ss_pred             eecCCCCCCeeeC--CCC--cEEEeccccccccCCCCC----Cce-eEeeccccccchhhhhhC--C---C-CCCcccHh
Q 045790            6 YSRSPELPPGRGD--FNF--NAKLGDFGLARLMDHELG----PKT-IMLVGTLAYMASEYISTG--R---V-SKELDVFS   70 (231)
Q Consensus         6 ~~rdlk~~nil~~--~~~--~~kl~Dfg~~~~~~~~~~----~~~-~~~~g~~~y~aPE~~~~~--~---~-~~~~Dv~s   70 (231)
                      -|||+|++|||+.  .+.  .+.|+|||.|........    ... ....|....||||+....  +   + -.++|.|+
T Consensus       363 AhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA  442 (598)
T KOG4158|consen  363 AHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWA  442 (598)
T ss_pred             hhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCCCceeeccchhhhhh
Confidence            3999999999984  333  368999998854322100    011 123456678999997432  1   1 25799999


Q ss_pred             HHHHHHHHHhCCCcccc
Q 045790           71 FRVVALEIATGRKVINR   87 (231)
Q Consensus        71 ~G~vl~el~~g~~p~~~   87 (231)
                      .|.+.||++....||..
T Consensus       443 ~GalaYEIfg~~NPFY~  459 (598)
T KOG4158|consen  443 AGALAYEIFGRSNPFYK  459 (598)
T ss_pred             hhhhHHHHhccCCcccc
Confidence            99999999999999965

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=98.85  E-value=1e-08  Score=84.90  Aligned_cols=85  Identities=22%  Similarity=0.164  Sum_probs=66.6

Q ss_pred             eeee-ecCCCCCCeeeCCC-----CcEEEecccccc--ccCCCCC-----C-c-eeEeeccccccchhhhhhCCCCCCcc
Q 045790            3 EVAY-SRSPELPPGRGDFN-----FNAKLGDFGLAR--LMDHELG-----P-K-TIMLVGTLAYMASEYISTGRVSKELD   67 (231)
Q Consensus         3 ~~~~-~rdlk~~nil~~~~-----~~~kl~Dfg~~~--~~~~~~~-----~-~-~~~~~g~~~y~aPE~~~~~~~~~~~D   67 (231)
                      +.|| ||||||.|+++...     ..+.+.|||+++  .......     . . .....||..|+++....+...+.+.|
T Consensus       140 ~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DD  219 (322)
T KOG1164|consen  140 SKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDD  219 (322)
T ss_pred             hcCcccCCcCHHHeeecCCCCcccceEEEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchh
Confidence            3566 99999999999854     358999999998  3211111     1 0 12356999999999988888999999


Q ss_pred             cHhHHHHHHHHHhCCCcccc
Q 045790           68 VFSFRVVALEIATGRKVINR   87 (231)
Q Consensus        68 v~s~G~vl~el~~g~~p~~~   87 (231)
                      +||++-++.+++.|..|+..
T Consensus       220 les~~Y~l~el~~g~LPW~~  239 (322)
T KOG1164|consen  220 LESLFYMLLELLKGSLPWEA  239 (322)
T ss_pred             hhhHHHHHHHHhcCCCCCcc
Confidence            99999999999999988854

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=98.55  E-value=1.2e-08  Score=90.75  Aligned_cols=84  Identities=23%  Similarity=0.168  Sum_probs=68.7

Q ss_pred             eecCCCCCCeeeCCCC-cEEEeccccccccCC--CCCCceeEeec-cccccchhhhhhCC-CCCCcccHhHHHHHHHHHh
Q 045790            6 YSRSPELPPGRGDFNF-NAKLGDFGLARLMDH--ELGPKTIMLVG-TLAYMASEYISTGR-VSKELDVFSFRVVALEIAT   80 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~-~~kl~Dfg~~~~~~~--~~~~~~~~~~g-~~~y~aPE~~~~~~-~~~~~Dv~s~G~vl~el~~   80 (231)
                      -|||+||+|.+++.++ ..+++|||++.....  +........+| ++-|.+||...+.. .....|+||.|+++..+++
T Consensus       146 ~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~  225 (601)
T KOG0590|consen  146 THRDIKPSNSLLDESGSALKIADFGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLT  225 (601)
T ss_pred             ccCCCCCccchhccCCCcccCCCchhhccccccCCcceeeecccCCCCCCCCcccccchhhcCCCccccccccccccccc
Confidence            4999999999999999 999999999976654  23333455678 89999999987643 4677999999999999999


Q ss_pred             CCCccccch
Q 045790           81 GRKVINRYK   89 (231)
Q Consensus        81 g~~p~~~~~   89 (231)
                      |..|.....
T Consensus       226 g~~p~~~~~  234 (601)
T KOG0590|consen  226 GELPWDFPS  234 (601)
T ss_pred             CCCCccccc
Confidence            999886543

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=98.40  E-value=1.9e-07  Score=75.58  Aligned_cols=89  Identities=18%  Similarity=0.063  Sum_probs=70.5

Q ss_pred             ecCCCCCCeeeCCC-----CcEEEeccccccccCCCCCCc------eeEeeccccccchhhhhhCCCCCCcccHhHHHHH
Q 045790            7 SRSPELPPGRGDFN-----FNAKLGDFGLARLMDHELGPK------TIMLVGTLAYMASEYISTGRVSKELDVFSFRVVA   75 (231)
Q Consensus         7 ~rdlk~~nil~~~~-----~~~kl~Dfg~~~~~~~~~~~~------~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl   75 (231)
                      -|||||+|.||...     ..+.++|||+++..-+.....      .....||..||+--+..+..-+.+-|.=|+|-|+
T Consensus       147 YRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvF  226 (449)
T KOG1165|consen  147 YRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVF  226 (449)
T ss_pred             ecccCccceeecCCCCCCCceEEEEeccchhhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhh
Confidence            59999999999733     247899999999875432221      2346789999999888787788889999999999


Q ss_pred             HHHHhCCCccccchhhhhhh
Q 045790           76 LEIATGRKVINRYKAQKLRT   95 (231)
Q Consensus        76 ~el~~g~~p~~~~~~~~~~~   95 (231)
                      ++.+-|..|+.+..++....
T Consensus       227 mYFLRGsLPWQGLKA~tnK~  246 (449)
T KOG1165|consen  227 MYFLRGSLPWQGLKADTNKE  246 (449)
T ss_pred             hhhccCCCccccccCcchHH
Confidence            99999999998866554433

>PRK09188 serine/threonine protein kinase; Provisional

Probab=98.38  E-value=1.9e-07  Score=78.19  Aligned_cols=53  Identities=13%  Similarity=-0.026  Sum_probs=40.7

Q ss_pred             eecCC-CCCCeeeCCCCcEEEeccccccccCCCCCC-------ceeEeeccccccchhhhh
Q 045790            6 YSRSP-ELPPGRGDFNFNAKLGDFGLARLMDHELGP-------KTIMLVGTLAYMASEYIS   58 (231)
Q Consensus         6 ~~rdl-k~~nil~~~~~~~kl~Dfg~~~~~~~~~~~-------~~~~~~g~~~y~aPE~~~   58 (231)
                      .|||| ||.|||++.++.+||+|||+++.+......       ......++..|++||.+.
T Consensus       133 iHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~  193 (365)
T PRK09188        133 THNDLAKPQNWLMGPDGEAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALT  193 (365)
T ss_pred             eeCCCCCcceEEEcCCCCEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCC
Confidence            59999 999999999999999999999876432211       113456777889999874

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=98.30  E-value=1.3e-07  Score=73.98  Aligned_cols=60  Identities=10%  Similarity=-0.095  Sum_probs=42.6

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHH
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEI   78 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el   78 (231)
                      -+|||+||.|++++.++ ++++|||...........             ..++....+..++|+|++|+.+...
T Consensus       156 i~H~Dikp~Nili~~~g-i~liDfg~~~~~~e~~a~-------------d~~vler~y~~~~di~~lg~~~~~~  215 (232)
T PRK10359        156 MVSGDPHKGNFIVSKNG-LRIIDLSGKRCTAQRKAK-------------DRIDLERHYGIKNEIKDLGYYLLIY  215 (232)
T ss_pred             CccCCCChHHEEEeCCC-EEEEECCCcccccchhhH-------------HHHHHHhHhcccccccceeEeehHH
Confidence            36999999999999888 999999987654211110             0122334466789999999887654

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=98.26  E-value=3.2e-07  Score=71.21  Aligned_cols=84  Identities=21%  Similarity=0.076  Sum_probs=63.7

Q ss_pred             ecCCCCCCeeeCCC---CcEEEeccccccccCCCCCCc------eeEeeccccccchhhhhhCCCCCCcccHhHHHHHHH
Q 045790            7 SRSPELPPGRGDFN---FNAKLGDFGLARLMDHELGPK------TIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALE   77 (231)
Q Consensus         7 ~rdlk~~nil~~~~---~~~kl~Dfg~~~~~~~~~~~~------~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~e   77 (231)
                      ||||||+|.|..-+   ..+.++|||+++..-+.....      .....||..|.+-....+..-+.+-|+=|+|-++.+
T Consensus       134 HRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmY  213 (341)
T KOG1163|consen  134 HRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMY  213 (341)
T ss_pred             cccCCccceeeccccccceEEEEeccchhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeee
Confidence            99999999998744   347899999998765422211      234578888887666555556777899999999999


Q ss_pred             HHhCCCccccchh
Q 045790           78 IATGRKVINRYKA   90 (231)
Q Consensus        78 l~~g~~p~~~~~~   90 (231)
                      .--|..|+++..+
T Consensus       214 fnrG~LPWQglka  226 (341)
T KOG1163|consen  214 FNRGSLPWQGLKA  226 (341)
T ss_pred             eecCCCcccccch
Confidence            9899999987654

>PRK12274 serine/threonine protein kinase; Provisional

Probab=98.19  E-value=7.5e-07  Score=68.68  Aligned_cols=84  Identities=12%  Similarity=-0.160  Sum_probs=57.8

Q ss_pred             eecCC-CCCCeeeCCCCcEEEeccccccccCCCCCC----c--------eeEeeccccccchhhhhhC-CCC-CCcccHh
Q 045790            6 YSRSP-ELPPGRGDFNFNAKLGDFGLARLMDHELGP----K--------TIMLVGTLAYMASEYISTG-RVS-KELDVFS   70 (231)
Q Consensus         6 ~~rdl-k~~nil~~~~~~~kl~Dfg~~~~~~~~~~~----~--------~~~~~g~~~y~aPE~~~~~-~~~-~~~Dv~s   70 (231)
                      .|||| ||.|||++.++.++|+|||++.........    .        ......++.++.|+..... ..+ ...+.++
T Consensus       113 vHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~  192 (218)
T PRK12274        113 AHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFA  192 (218)
T ss_pred             ccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHH
Confidence            49999 799999999999999999999754432210    0        0112245667777654332 233 3455677


Q ss_pred             HHHHHHHHHhCCCccccch
Q 045790           71 FRVVALEIATGRKVINRYK   89 (231)
Q Consensus        71 ~G~vl~el~~g~~p~~~~~   89 (231)
                      .|..++.++|+..++.+..
T Consensus       193 ~g~~~~~~~~~~~~~~~~~  211 (218)
T PRK12274        193 TGKPVYRFVTRRVLHWEDN  211 (218)
T ss_pred             hcchHHHHHhccCCccccC
Confidence            8999999999998887654

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=98.15  E-value=7.6e-07  Score=80.82  Aligned_cols=68  Identities=13%  Similarity=-0.009  Sum_probs=49.4

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCC-CCCCcccHhHHH
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGR-VSKELDVFSFRV   73 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~-~~~~~Dv~s~G~   73 (231)
                      ..||||||+|||++.++.+||+|||+++..... ........+++.|.+||...... -....++|++|.
T Consensus       125 IiHrDLKP~NILl~~~g~vkL~DFGls~~~~~~-~~~~~~~~~t~~~~~pe~~~~~~~~~~~s~~~s~g~  193 (669)
T cd05610         125 IIHRDLKPDNMLISNEGHIKLTDFGLSKVTLNR-ELNMMDILTTPSMAKPKNDYSRTPGQVLSLISSLGF  193 (669)
T ss_pred             EEeCCccHHHEEEcCCCCEEEEeCCCCccccCC-cccccccccCccccCccccccCCCCceeeeeeecCc
Confidence            369999999999999999999999999875432 22233457788999998764322 233466777774

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=97.79  E-value=3.4e-05  Score=71.47  Aligned_cols=78  Identities=15%  Similarity=-0.024  Sum_probs=61.0

Q ss_pred             eecCCCCCCeeeC-------CCCcEEEeccccccccCCCC-CCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHH
Q 045790            6 YSRSPELPPGRGD-------FNFNAKLGDFGLARLMDHEL-GPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALE   77 (231)
Q Consensus         6 ~~rdlk~~nil~~-------~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~e   77 (231)
                      .|.||||+|.+|.       .+..++|+|||.+--+.--. ...-....++-++-++|...+..++..+|.|.++.+++.
T Consensus       816 IHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~  895 (974)
T KOG1166|consen  816 IHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHV  895 (974)
T ss_pred             ecccCCcceeEeecccCCCCcccceEEEecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHH
Confidence            4999999999884       34568999999884332111 123345567888999999999999999999999999999


Q ss_pred             HHhCCC
Q 045790           78 IATGRK   83 (231)
Q Consensus        78 l~~g~~   83 (231)
                      |+.|+.
T Consensus       896 mLFG~y  901 (974)
T KOG1166|consen  896 MLFGKY  901 (974)
T ss_pred             HHHHHH
Confidence            998863

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=97.69  E-value=4.3e-05  Score=70.45  Aligned_cols=94  Identities=21%  Similarity=0.177  Sum_probs=73.3

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCC----------C------C--------------CceeEeeccccccchh
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHE----------L------G--------------PKTIMLVGTLAYMASE   55 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~----------~------~--------------~~~~~~~g~~~y~aPE   55 (231)
                      -|||+|+.|+++..++..++++||.....+.-          .      .              .......++..|.+||
T Consensus       926 ~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe 1005 (1205)
T KOG0606|consen  926 KHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPE 1005 (1205)
T ss_pred             hcccccccchhhcccCCcccCccccccccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCc
Confidence            49999999999999999999999843221100          0      0              0012346788999999


Q ss_pred             hhhhCCCCCCcccHhHHHHHHHHHhCCCccccchhhhhhhhccc
Q 045790           56 YISTGRVSKELDVFSFRVVALEIATGRKVINRYKAQKLRTQFVV   99 (231)
Q Consensus        56 ~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~~~~~~~~~~~~~~~   99 (231)
                      .+.+..-...+|.|+.|+.+++.++|.+||....++++...+..
T Consensus      1006 ~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~tpq~~f~ni~~ 1049 (1205)
T KOG0606|consen 1006 ILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAETPQQIFENILN 1049 (1205)
T ss_pred             ccccccCCCcchhhhhhhhhhhhhcCCCCCCCcchhhhhhcccc
Confidence            99988888899999999999999999999998887766655554

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=97.38  E-value=0.00018  Score=62.53  Aligned_cols=80  Identities=23%  Similarity=0.211  Sum_probs=62.1

Q ss_pred             eecCCCCCCeeeCCC-CcEEEeccccccccCCCCCCce----eEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh
Q 045790            6 YSRSPELPPGRGDFN-FNAKLGDFGLARLMDHELGPKT----IMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT   80 (231)
Q Consensus         6 ~~rdlk~~nil~~~~-~~~kl~Dfg~~~~~~~~~~~~~----~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~   80 (231)
                      .|-|+|+.||++..+ ..++++|||+...++.+.....    ....|...|++||.+. ..+....|++++|.++.+...
T Consensus       244 ~~~~~kp~~i~~~~~~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l  322 (524)
T KOG0601|consen  244 VHDDLKPANIFTTSDWTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAIL  322 (524)
T ss_pred             cccccchhheecccccceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhHh
Confidence            478999999999988 8899999999888775542221    1114566899999984 456788999999999999888


Q ss_pred             CCCccc
Q 045790           81 GRKVIN   86 (231)
Q Consensus        81 g~~p~~   86 (231)
                      +...+.
T Consensus       323 ~~~~~~  328 (524)
T KOG0601|consen  323 GSHLPS  328 (524)
T ss_pred             hccccc
Confidence            776553

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=97.34  E-value=9.4e-05  Score=65.47  Aligned_cols=81  Identities=21%  Similarity=0.230  Sum_probs=59.9

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCc--------eeEeeccccccchhhhhhCCCCCCcccHhHHHHHHH
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPK--------TIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALE   77 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~--------~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~e   77 (231)
                      .|+.|.|++|.+++++..|++.|+++.....+....        ........-|.+||++.+.....++|++|+|++++-
T Consensus       122 VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~~~~~~~sd~fSlG~li~~  201 (700)
T KOG2137|consen  122 VHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLGTTNTPASDVFSLGVLIYT  201 (700)
T ss_pred             eecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhccccccccccceeeeeEEEE
Confidence            488999999999999999999998875443211111        011123447999999988777899999999999998


Q ss_pred             HH-hCCCccc
Q 045790           78 IA-TGRKVIN   86 (231)
Q Consensus        78 l~-~g~~p~~   86 (231)
                      ++ .|+..+.
T Consensus       202 i~~~gk~i~~  211 (700)
T KOG2137|consen  202 IYNGGKSIIA  211 (700)
T ss_pred             EecCCcchhh
Confidence            88 4555443

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=97.32  E-value=0.00014  Score=57.70  Aligned_cols=28  Identities=21%  Similarity=-0.013  Sum_probs=25.8

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARL   33 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~   33 (231)
                      +||||||.|||++.++.++|+|||.+..
T Consensus       164 ~HrDlkp~NILv~~~~~v~LIDfg~~~~  191 (239)
T PRK01723        164 YHADLNAHNILLDPDGKFWLIDFDRGEL  191 (239)
T ss_pred             CCCCCCchhEEEcCCCCEEEEECCCccc
Confidence            5999999999999888999999998765

>smart00090 RIO RIO-like kinase

Probab=97.09  E-value=0.0003  Score=55.76  Aligned_cols=30  Identities=7%  Similarity=-0.214  Sum_probs=26.2

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccC
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMD   35 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~   35 (231)
                      -.||||||.||+++ ++.++|+|||.+...+
T Consensus       170 iiH~Dikp~NIli~-~~~i~LiDFg~a~~~~  199 (237)
T smart00090      170 LVHGDLSEYNILVH-DGKVVIIDVSQSVELD  199 (237)
T ss_pred             EEeCCCChhhEEEE-CCCEEEEEChhhhccC
Confidence            36999999999999 8889999999887543

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=96.61  E-value=0.0015  Score=56.91  Aligned_cols=75  Identities=19%  Similarity=0.119  Sum_probs=52.0

Q ss_pred             ecCCCCCCeeeCCC-CcEEEeccccccccCCCCCCceeEeecccccc--chhhhhhCCCCCCcccHhHHHHHHHHHhCCC
Q 045790            7 SRSPELPPGRGDFN-FNAKLGDFGLARLMDHELGPKTIMLVGTLAYM--ASEYISTGRVSKELDVFSFRVVALEIATGRK   83 (231)
Q Consensus         7 ~rdlk~~nil~~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~--aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~   83 (231)
                      |+|+|++||++..+ +..+++|||....+.-    ........-++.  ++.......+..++|++++|..+.+.+++..
T Consensus       389 ~~d~~psni~i~~~~~~~~~~~~~~~t~~~~----~~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~  464 (524)
T KOG0601|consen  389 HLDVKPSNILISNDGFFSKLGDFGCWTRLAF----SSGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSP  464 (524)
T ss_pred             cccccccceeeccchhhhhccccccccccce----ecccccccccccccchhhccccccccccccccccccccccccCcc
Confidence            88999999999875 7889999988753211    011122222344  4444455678899999999999988888775


Q ss_pred             cc
Q 045790           84 VI   85 (231)
Q Consensus        84 p~   85 (231)
                      .-
T Consensus       465 ls  466 (524)
T KOG0601|consen  465 LS  466 (524)
T ss_pred             cC
Confidence            43

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=96.61  E-value=0.0017  Score=53.22  Aligned_cols=77  Identities=16%  Similarity=0.069  Sum_probs=50.9

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCC----CCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHEL----GPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT   80 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~----~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~   80 (231)
                      .+|..+..+.|++..++-+|+.- +.........    ........+.++|.+|++=.....+.++|||+||.-.+++..
T Consensus       199 iihgnlTc~tifiq~ngLIkig~-~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemai  277 (458)
T KOG1266|consen  199 IIHGNLTCDTIFIQHNGLIKIGS-VAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAI  277 (458)
T ss_pred             cccCCcchhheeecCCceEEecc-cCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHH
Confidence            46888999999999999888752 2211111000    011223456778999987555567788999999988788766


Q ss_pred             CC
Q 045790           81 GR   82 (231)
Q Consensus        81 g~   82 (231)
                      +.
T Consensus       278 lE  279 (458)
T KOG1266|consen  278 LE  279 (458)
T ss_pred             he
Confidence            54

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=96.60  E-value=0.0017  Score=56.20  Aligned_cols=31  Identities=10%  Similarity=-0.125  Sum_probs=27.8

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccC
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMD   35 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~   35 (231)
                      -+|+|+||.||+++.++.++++|||++..+.
T Consensus       278 ~~H~D~hPgNilv~~~g~i~liDfG~~~~l~  308 (437)
T TIGR01982       278 FFHADLHPGNIFVLKDGKIIALDFGIVGRLS  308 (437)
T ss_pred             ceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence            3699999999999999999999999987654

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>PRK10345 hypothetical protein; Provisional

Probab=96.53  E-value=0.0012  Score=51.36  Aligned_cols=26  Identities=4%  Similarity=-0.346  Sum_probs=20.8

Q ss_pred             eecCCCCCCeeeCC----CCcEEEeccccc
Q 045790            6 YSRSPELPPGRGDF----NFNAKLGDFGLA   31 (231)
Q Consensus         6 ~~rdlk~~nil~~~----~~~~kl~Dfg~~   31 (231)
                      .||||||.|||++.    ++.++|+||+.+
T Consensus       127 vhrDlKp~NILl~~~~~~~~~~~LiDg~G~  156 (210)
T PRK10345        127 VTMELKPQNILCQRISESEVIPVVCDNIGE  156 (210)
T ss_pred             eecCCCHHHEEEeccCCCCCcEEEEECCCC
Confidence            49999999999973    347999995443

>PRK14879 serine/threonine protein kinase; Provisional

Probab=96.43  E-value=0.0021  Score=49.60  Aligned_cols=27  Identities=22%  Similarity=0.055  Sum_probs=24.4

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARL   33 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~   33 (231)
                      .|+|++|.||+++ ++.++|+|||.+..
T Consensus       117 ~H~Dl~p~Nil~~-~~~~~liDf~~a~~  143 (211)
T PRK14879        117 IHGDLTTSNMILS-GGKIYLIDFGLAEF  143 (211)
T ss_pred             ccCCCCcccEEEE-CCCEEEEECCcccC
Confidence            5999999999999 78899999998765

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=96.36  E-value=0.0024  Score=48.77  Aligned_cols=27  Identities=19%  Similarity=0.048  Sum_probs=24.6

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARL   33 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~   33 (231)
                      .|+|++|.||+++ ++.++++|||.+..
T Consensus       112 ~H~Dl~~~Nil~~-~~~~~liDfg~a~~  138 (199)
T TIGR03724       112 VHGDLTTSNIIVR-DDKLYLIDFGLGKY  138 (199)
T ss_pred             ecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence            4999999999999 78999999998765

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=96.33  E-value=0.0017  Score=57.76  Aligned_cols=28  Identities=18%  Similarity=-0.019  Sum_probs=24.8

Q ss_pred             eecCCCCCCeeeCCCCcEEEecccccccc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLM   34 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~   34 (231)
                      .|||+||+||++ .++.++|+|||+++..
T Consensus       450 iHrDlkp~NILl-~~~~~~liDFGla~~~  477 (535)
T PRK09605        450 VHGDLTTSNFIV-RDDRLYLIDFGLGKYS  477 (535)
T ss_pred             ccCCCChHHEEE-ECCcEEEEeCcccccC
Confidence            499999999999 5778999999998763

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=96.23  E-value=0.011  Score=50.37  Aligned_cols=84  Identities=13%  Similarity=0.046  Sum_probs=59.7

Q ss_pred             eee-ecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhh-----hCCCCCCcccHhHHHHHHH
Q 045790            4 VAY-SRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIS-----TGRVSKELDVFSFRVVALE   77 (231)
Q Consensus         4 ~~~-~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~Dv~s~G~vl~e   77 (231)
                      -|| ..|+.++|+|++..+.+.|.|-..-...  .......+.+|...|++||.-.     +..-....|.|.+|+++++
T Consensus       136 ~Gh~vGDVn~~~~lVsd~~~V~LVdsDsfqi~--~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~  213 (637)
T COG4248         136 HGHVVGDVNQNSFLVSDDSKVVLVDSDSFQIN--ANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFH  213 (637)
T ss_pred             cCCcccccCccceeeecCceEEEEcccceeec--cCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHH
Confidence            455 4699999999999999998864322111  1122234557888999999753     2334566899999999999


Q ss_pred             HHhC-CCccccch
Q 045790           78 IATG-RKVINRYK   89 (231)
Q Consensus        78 l~~g-~~p~~~~~   89 (231)
                      ++.| ..||.+..
T Consensus       214 lL~ggrHPysGI~  226 (637)
T COG4248         214 LLFGGRHPYSGIP  226 (637)
T ss_pred             HHhcCCCCCCccc
Confidence            8775 89997643

>cd05151 ChoK Choline Kinase (ChoK)

Probab=96.04  E-value=0.0046  Score=45.79  Aligned_cols=27  Identities=15%  Similarity=-0.159  Sum_probs=23.8

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARL   33 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~   33 (231)
                      .|+|+++.||+++ ++.++++||+.+..
T Consensus       110 ~HgD~~~~Nil~~-~~~~~liDf~~a~~  136 (170)
T cd05151         110 CHNDLLPGNFLLD-DGRLWLIDWEYAGM  136 (170)
T ss_pred             ecCCCCcCcEEEE-CCeEEEEecccccC
Confidence            6999999999999 66799999998754

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=95.92  E-value=0.0043  Score=54.87  Aligned_cols=31  Identities=10%  Similarity=0.026  Sum_probs=27.2

Q ss_pred             eeecCCCCCCeeeCCCC----cEEEeccccccccC
Q 045790            5 AYSRSPELPPGRGDFNF----NAKLGDFGLARLMD   35 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~----~~kl~Dfg~~~~~~   35 (231)
                      -||+|+||.||+++.++    .+++.|||+...+.
T Consensus       281 ffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~  315 (537)
T PRK04750        281 FFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN  315 (537)
T ss_pred             eeeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence            36999999999999887    89999999987654

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=93.15  E-value=0.063  Score=41.50  Aligned_cols=29  Identities=17%  Similarity=-0.035  Sum_probs=24.9

Q ss_pred             eeecCCCCCCeeeCCCC---cEEEeccccccc
Q 045790            5 AYSRSPELPPGRGDFNF---NAKLGDFGLARL   33 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~---~~kl~Dfg~~~~   33 (231)
                      .+|+|+++.|||++.+.   .+.++||+.++.
T Consensus       139 i~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~  170 (206)
T PF06293_consen  139 IYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF  170 (206)
T ss_pred             CCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence            46999999999999776   788999987765

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=92.63  E-value=0.077  Score=42.88  Aligned_cols=29  Identities=10%  Similarity=-0.030  Sum_probs=24.1

Q ss_pred             eeecCCCCCCeeeCC-------CCcEEEeccccccc
Q 045790            5 AYSRSPELPPGRGDF-------NFNAKLGDFGLARL   33 (231)
Q Consensus         5 ~~~rdlk~~nil~~~-------~~~~kl~Dfg~~~~   33 (231)
                      -+|+|++++|||++.       +..+.++||+.+..
T Consensus       159 i~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~~  194 (268)
T PRK15123        159 INHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQI  194 (268)
T ss_pred             CccCCCChhhEEEeccccCCCCCceEEEEECCcccc
Confidence            369999999999974       46789999998754

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=92.61  E-value=0.095  Score=39.79  Aligned_cols=26  Identities=15%  Similarity=-0.047  Sum_probs=22.7

Q ss_pred             ecCCCCCCeeeCCCCcEEEeccccccc
Q 045790            7 SRSPELPPGRGDFNFNAKLGDFGLARL   33 (231)
Q Consensus         7 ~rdlk~~nil~~~~~~~kl~Dfg~~~~   33 (231)
                      |.||.++|+++.... +.++|||++..
T Consensus       115 HGDLTtsNiIl~~~~-i~~IDfGLg~~  140 (204)
T COG3642         115 HGDLTTSNIILSGGR-IYFIDFGLGEF  140 (204)
T ss_pred             cCCCccceEEEeCCc-EEEEECCcccc
Confidence            999999999998544 88999999865

>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]

Probab=91.54  E-value=0.034  Score=54.63  Aligned_cols=83  Identities=16%  Similarity=0.090  Sum_probs=64.2

Q ss_pred             eeeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCC
Q 045790            4 VAYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRK   83 (231)
Q Consensus         4 ~~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~   83 (231)
                      ++.|+++|+-|.+|..+..+|++++|+.+.... .........+++.|+.++....-.++.+.|+|..++.++.+-.|..
T Consensus      1360 T~v~~~Lkf~lpmIVtny~v~~gk~gLdKIknp-~~sf~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~~ly~rs~~n~ 1438 (2724)
T KOG1826|consen 1360 TNVSKSLKFTLPMIVTNYNVKLGKGGLDKIKNP-VLSFFGLELCSPIYVLQLIKNEIKFTKRSDILRRSLSLYLRSDGNA 1438 (2724)
T ss_pred             cchhhhhhhhccceecCCcccccccccccccCc-hHhhhhhhhCCHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhcccH
Confidence            567999999999999999999999999883321 1112234556777888888777778888999999999988877777


Q ss_pred             cccc
Q 045790           84 VINR   87 (231)
Q Consensus        84 p~~~   87 (231)
                      +|-.
T Consensus      1439 ~fi~ 1442 (2724)
T KOG1826|consen 1439 YFIF 1442 (2724)
T ss_pred             HHHH
Confidence            6643

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=90.13  E-value=0.31  Score=37.15  Aligned_cols=28  Identities=18%  Similarity=-0.132  Sum_probs=21.4

Q ss_pred             eecCCCCCCeeeCCCCcEEEecccccccc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLM   34 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~   34 (231)
                      .|.|+...||+++.+ .+.++|||-+...
T Consensus       129 vHGDLs~~NIlv~~~-~~~iIDf~qav~~  156 (188)
T PF01163_consen  129 VHGDLSEYNILVDDG-KVYIIDFGQAVDS  156 (188)
T ss_dssp             EESS-STTSEEEETT-CEEE--GTTEEET
T ss_pred             eecCCChhhEEeecc-eEEEEecCcceec
Confidence            499999999999977 8999999977553

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=89.19  E-value=0.29  Score=37.28  Aligned_cols=28  Identities=21%  Similarity=0.046  Sum_probs=22.6

Q ss_pred             eecCCCCCCeeeCCCCc---EEEeccccccc
Q 045790            6 YSRSPELPPGRGDFNFN---AKLGDFGLARL   33 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~---~kl~Dfg~~~~   33 (231)
                      .|.||..+||++..++.   +.++|||++..
T Consensus       135 iHGDLTTSNill~~~~~~~~~~lIdfgls~~  165 (229)
T KOG3087|consen  135 IHGDLTTSNILLRSDGNQITPILIDFGLSSV  165 (229)
T ss_pred             ecccccccceEEecCCCcCceEEEeecchhc
Confidence            49999999999875443   47999999854

>PRK10271 thiK thiamine kinase; Provisional

Probab=88.61  E-value=0.38  Score=36.65  Aligned_cols=27  Identities=11%  Similarity=-0.176  Sum_probs=23.2

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARL   33 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~   33 (231)
                      .|.|+.|.|++++.++ ++|+||+.+..
T Consensus        80 ~H~D~~~~N~~~~~~~-~~lIDwe~a~~  106 (188)
T PRK10271         80 LHMDVHAGNLVHSASG-LRLIDWEYAGD  106 (188)
T ss_pred             ecCCCCCccEEEECCC-EEEEeCCcccC
Confidence            5999999999998776 88999998743

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=87.06  E-value=0.88  Score=41.05  Aligned_cols=73  Identities=14%  Similarity=0.004  Sum_probs=46.2

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATG   81 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g   81 (231)
                      .|.+|--+-|+++..|..||++|.++........ ......--..|..|+.+...  .-..|.|.+||++++++.|
T Consensus       127 vHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~-~~~~~~~~~s~~~P~~~~~s--~~s~D~~~Lg~li~el~ng  199 (690)
T KOG1243|consen  127 VHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA-PAKSLYLIESFDDPEEIDPS--EWSIDSWGLGCLIEELFNG  199 (690)
T ss_pred             eeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc-ccccchhhhcccChhhcCcc--ccchhhhhHHHHHHHHhCc
Confidence            3777777789999999999999977643321110 11111111235555543211  1346999999999999999

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=86.48  E-value=0.61  Score=36.48  Aligned_cols=29  Identities=10%  Similarity=-0.166  Sum_probs=24.3

Q ss_pred             eeecCCCCCCeeeCC-CCcEEEeccccccc
Q 045790            5 AYSRSPELPPGRGDF-NFNAKLGDFGLARL   33 (231)
Q Consensus         5 ~~~rdlk~~nil~~~-~~~~kl~Dfg~~~~   33 (231)
                      --|.|+.+.||+++. +..+.++||..+..
T Consensus       172 l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~~  201 (235)
T cd05157         172 FCHNDLLSGNIIYNEEKNSVKFIDYEYAGY  201 (235)
T ss_pred             EEcCCCCcCcEEEeCCCCCEEEEEcccCCc
Confidence            349999999999997 57899999987643

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=85.29  E-value=0.72  Score=36.24  Aligned_cols=27  Identities=11%  Similarity=-0.113  Sum_probs=23.1

Q ss_pred             eecCCCCCCeeeCCCCcEEEecccccc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLAR   32 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~   32 (231)
                      .|.|+.+.||+++.+....|+||+.+.
T Consensus       167 ~HGD~~~~Nvlv~~~~i~giIDw~~a~  193 (235)
T cd05155         167 FHGDLAPGNLLVQDGRLSAVIDFGCLG  193 (235)
T ss_pred             EeCCCCCCcEEEECCCEEEEEeCcccC
Confidence            599999999999977666799999764

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>PRK05231 homoserine kinase; Provisional

Probab=85.22  E-value=0.68  Score=38.16  Aligned_cols=29  Identities=10%  Similarity=-0.269  Sum_probs=23.8

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccc
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARL   33 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~   33 (231)
                      ..|+|+.+.||+++.+....|+||+.+..
T Consensus       189 liHgD~~~~Nil~~~~~~~~iIDf~~~~~  217 (319)
T PRK05231        189 VIHADLFRDNVLFEGDRLSGFIDFYFACN  217 (319)
T ss_pred             cCCCCCCCCcEEEECCceEEEEecccccC
Confidence            35999999999999766668999987643

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=85.13  E-value=0.74  Score=37.61  Aligned_cols=27  Identities=15%  Similarity=-0.215  Sum_probs=23.5

Q ss_pred             eecCCCCCCeeeCCC----CcEEEecccccc
Q 045790            6 YSRSPELPPGRGDFN----FNAKLGDFGLAR   32 (231)
Q Consensus         6 ~~rdlk~~nil~~~~----~~~kl~Dfg~~~   32 (231)
                      -|.|+.+.||+++.+    +.+.++||..+.
T Consensus       182 cH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~  212 (302)
T cd05156         182 CHNDLQEGNILLLNPSSETKKLVLIDFEYAS  212 (302)
T ss_pred             EecCCCcCeEEecCCCCCCCcEEEEeeCCCC
Confidence            399999999999874    789999998764

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=84.98  E-value=0.53  Score=38.03  Aligned_cols=29  Identities=7%  Similarity=-0.278  Sum_probs=25.2

Q ss_pred             eeee-ecCCCCCCeeeCCCCcEEEeccccc
Q 045790            3 EVAY-SRSPELPPGRGDFNFNAKLGDFGLA   31 (231)
Q Consensus         3 ~~~~-~rdlk~~nil~~~~~~~kl~Dfg~~   31 (231)
                      +.|| |.|+..-||+++.+|.+.++||-=+
T Consensus       220 ~~GiVHGDlSefNIlV~~dg~~~vIDwPQ~  249 (304)
T COG0478         220 RRGIVHGDLSEFNILVTEDGDIVVIDWPQA  249 (304)
T ss_pred             HcCccccCCchheEEEecCCCEEEEeCccc
Confidence            4566 9999999999999999999998533

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=84.65  E-value=0.5  Score=42.66  Aligned_cols=75  Identities=24%  Similarity=0.221  Sum_probs=55.7

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCc
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      ++|||    ||+..+ ...+..+|+....+....  ...+..+++-+++||+.....+..+.|+|+.+.--.++.-|-+|
T Consensus       357 ~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~--~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pP  429 (829)
T KOG0576|consen  357 KVHRD----NILGSE-EEVKLLDFAVPPQLTRTM--KPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPP  429 (829)
T ss_pred             ccCcc----cccccc-cccccccccCCcccCccc--ccccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCC
Confidence            46777    666654 678899999887765432  33556788999999999888899999999998765566556555


Q ss_pred             cc
Q 045790           85 IN   86 (231)
Q Consensus        85 ~~   86 (231)
                      -.
T Consensus       430 r~  431 (829)
T KOG0576|consen  430 RS  431 (829)
T ss_pred             CC
Confidence            43

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=84.58  E-value=0.82  Score=36.04  Aligned_cols=27  Identities=19%  Similarity=-0.041  Sum_probs=23.6

Q ss_pred             eecCCCCCCeeeCCCCcEEEecccccc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLAR   32 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~   32 (231)
                      .|+|+.+.||+++.+....|+||+.+.
T Consensus       166 ~HgD~~~~Nil~~~~~~~~iIDwe~a~  192 (244)
T cd05150         166 THGDACLPNIIVDPGKFSGFIDLGRLG  192 (244)
T ss_pred             ECCCCCCccEEEeCCcEEEEEEccccc
Confidence            499999999999987778899998664

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=84.32  E-value=0.51  Score=36.42  Aligned_cols=29  Identities=14%  Similarity=-0.182  Sum_probs=19.0

Q ss_pred             eeecCCCCCCeeeC-CCCcEEEeccccccc
Q 045790            5 AYSRSPELPPGRGD-FNFNAKLGDFGLARL   33 (231)
Q Consensus         5 ~~~rdlk~~nil~~-~~~~~kl~Dfg~~~~   33 (231)
                      -.|.|+.+.||+++ .++.+.|+||+.+..
T Consensus       168 ~~HgD~~~~Nil~~~~~~~i~iID~e~a~~  197 (239)
T PF01636_consen  168 LIHGDLHPGNILVDPSDGRIGIIDFEDAGW  197 (239)
T ss_dssp             EE-SS-SGGGEEEESSTTEEEE--GTT-EE
T ss_pred             EEEeccccccceeeeccceeEEEecccceE
Confidence            34999999999999 666668999987643

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]

Probab=84.19  E-value=0.81  Score=38.74  Aligned_cols=27  Identities=37%  Similarity=0.262  Sum_probs=25.2

Q ss_pred             ecCCCCCCeeeCCCCcEEEecccccccc
Q 045790            7 SRSPELPPGRGDFNFNAKLGDFGLARLM   34 (231)
Q Consensus         7 ~rdlk~~nil~~~~~~~kl~Dfg~~~~~   34 (231)
                      ||++.-.||||+ +|.+-|+||-+++..
T Consensus       345 hrnlt~~niLId-~GnvtLIDfklsRl~  371 (488)
T COG5072         345 HRNLTLDNILID-EGNVTLIDFKLSRLS  371 (488)
T ss_pred             cccccccceeee-cCceEEEEeeeeecc
Confidence            999999999999 899999999999854

>TIGR02721 ycfN_thiK thiamine kinase

Probab=84.06  E-value=0.76  Score=36.58  Aligned_cols=27  Identities=15%  Similarity=-0.229  Sum_probs=23.0

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARL   33 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~   33 (231)
                      -|+|+.+.||+++.++ +.|+||..+..
T Consensus       149 ~H~Dl~~~Nil~~~~~-~~lIDwE~a~~  175 (256)
T TIGR02721       149 LHMDVHAYNLVVTPQG-LKLIDWEYASD  175 (256)
T ss_pred             ecCCCCcCcEEEeCCC-CEEEeccccCc
Confidence            4999999999999876 78999987643

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=84.05  E-value=0.84  Score=35.83  Aligned_cols=27  Identities=7%  Similarity=-0.240  Sum_probs=23.6

Q ss_pred             eeecCCCCCCeeeCCCCcEEEecccccc
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLAR   32 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~   32 (231)
                      ..|.|+.+.||+++.++ +.|+||+.+.
T Consensus       155 ~~HgD~~~~Nii~~~~~-~~iIDwe~a~  181 (226)
T TIGR02172       155 CLHGDFQIGNLITSGKG-TYWIDLGDFG  181 (226)
T ss_pred             eEecCCCCCcEEEcCCC-cEEEechhcC
Confidence            35999999999999877 9999998764

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=83.33  E-value=0.68  Score=35.69  Aligned_cols=27  Identities=19%  Similarity=-0.058  Sum_probs=18.6

Q ss_pred             ecCCCCCCeee-CCCCcEEEeccccccc
Q 045790            7 SRSPELPPGRG-DFNFNAKLGDFGLARL   33 (231)
Q Consensus         7 ~rdlk~~nil~-~~~~~~kl~Dfg~~~~   33 (231)
                      |.|+.+.||++ +.++.++++||..+..
T Consensus       147 HnDl~~~Nil~~~~~~~~~lIDfEya~~  174 (211)
T PF01633_consen  147 HNDLNPGNILINNKDGEVKLIDFEYAGY  174 (211)
T ss_dssp             -S--SGGGEEETSSSSCEEE--GTT-EE
T ss_pred             eccCccccEEeccCCCeEEEecHHHHhh
Confidence            99999999999 7889999999987643

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=83.25  E-value=0.92  Score=37.22  Aligned_cols=28  Identities=14%  Similarity=-0.227  Sum_probs=24.1

Q ss_pred             eeecCCCCCCeeeCCCCcEEEecccccc
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLAR   32 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~   32 (231)
                      -.|.|+.+.|++++.++.+.|+||+.+.
T Consensus       189 l~HgD~~~~Nvl~~~~~~~~vIDfd~~~  216 (307)
T TIGR00938       189 VIHADLFPDNVLFDGDSVKGVIDFYFAC  216 (307)
T ss_pred             cCCCCCCcCcEEEECCceEEEeeccccc
Confidence            3599999999999988777899998764

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=83.02  E-value=0.89  Score=36.94  Aligned_cols=28  Identities=14%  Similarity=-0.247  Sum_probs=24.1

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARL   33 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~   33 (231)
                      -|.|+.+.||+++.+..+.|+||+.+..
T Consensus       178 ~HgD~~~~Nil~~~~~~~~iIDfe~a~~  205 (296)
T cd05153         178 IHADLFRDNVLFDGDELSGVIDFYFACT  205 (296)
T ss_pred             CccCcCcccEEEeCCceEEEeehhhhcC
Confidence            4999999999999877778999987643

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>PLN02236 choline kinase

Probab=81.09  E-value=1.2  Score=37.29  Aligned_cols=28  Identities=11%  Similarity=-0.082  Sum_probs=23.7

Q ss_pred             eecCCCCCCeeeCC-CCcEEEeccccccc
Q 045790            6 YSRSPELPPGRGDF-NFNAKLGDFGLARL   33 (231)
Q Consensus         6 ~~rdlk~~nil~~~-~~~~kl~Dfg~~~~   33 (231)
                      -|.|+++.||+++. ++.+.++||..+..
T Consensus       203 cH~Dl~~~Nil~~~~~~~~~lID~Eya~~  231 (344)
T PLN02236        203 CHNDLQYGNIMIDEETRAITIIDYEYASY  231 (344)
T ss_pred             EeCCCCcCcEEEeCCCCcEEEEeehhccc
Confidence            39999999999986 46799999987754

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=80.81  E-value=1.5  Score=34.47  Aligned_cols=28  Identities=18%  Similarity=0.042  Sum_probs=22.6

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccc
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARL   33 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~   33 (231)
                      -||.|+.|.|++++.+ .++++||+..+.
T Consensus       156 ~~HGD~hpgNFlv~~~-~i~iID~~~k~~  183 (229)
T PF06176_consen  156 FYHGDPHPGNFLVSNN-GIRIIDTQGKRM  183 (229)
T ss_pred             CccCCCCcCcEEEECC-cEEEEECccccc
Confidence            3699999999999854 488999976543

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	231
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		9e-13
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		5e-12
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		2e-07
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		2e-07
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		7e-07
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		5e-06
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		2e-05
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		3e-05

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score = 70.1 bits (170), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 81/174 (46%), Gaps = 34/174 (19%)
Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALE 77
           D  F A +GDFGLA+LMD++       + GT+ ++A EY+STG+ S++ DVF + V+ LE
Sbjct: 176 DEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLE 235
Query: 78  IATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVW 137
           + TG++  +  +              +N   V                      L+ WV 
Sbjct: 236 LITGQRAFDLAR-------------LANDDDV---------------------MLLDWVK 261
Query: 138 DLYGERKLLSAANERLDSRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLN 191
            L  E+KL +  +  L   + ++++  L+ V L C       RP + + +++L 
Sbjct: 262 GLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 315

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score = 67.8 bits (164), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 80/174 (45%), Gaps = 34/174 (19%)
Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALE 77
           D  F A +GDFGLA+LMD++       + G + ++A EY+STG+ S++ DVF + V+ LE
Sbjct: 168 DEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLE 227
Query: 78  IATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVW 137
           + TG++  +  +              +N   V                      L+ WV 
Sbjct: 228 LITGQRAFDLAR-------------LANDDDV---------------------MLLDWVK 253
Query: 138 DLYGERKLLSAANERLDSRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLN 191
            L  E+KL +  +  L   + ++++  L+ V L C       RP + + +++L 
Sbjct: 254 GLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/79 (41%), Positives = 48/79 (60%), Gaps = 6/79 (7%)
Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIM---LVGTLAYMASEYISTGRVSKELDVFSFRVV 74
           D  F AK+ DFGLAR    E   +T+M   +VGT AYMA E +  G ++ + D++SF VV
Sbjct: 167 DEAFTAKISDFGLARA--SEKFAQTVMXSRIVGTTAYMAPEALR-GEITPKSDIYSFGVV 223
Query: 75  ALEIATGRKVINRYKAQKL 93
            LEI TG   ++ ++  +L
Sbjct: 224 LLEIITGLPAVDEHREPQL 242

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/79 (41%), Positives = 48/79 (60%), Gaps = 6/79 (7%)
Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIM---LVGTLAYMASEYISTGRVSKELDVFSFRVV 74
           D  F AK+ DFGLAR    E   +T+M   +VGT AYMA E +  G ++ + D++SF VV
Sbjct: 167 DEAFTAKISDFGLARA--SEKFAQTVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVV 223
Query: 75  ALEIATGRKVINRYKAQKL 93
            LEI TG   ++ ++  +L
Sbjct: 224 LLEIITGLPAVDEHREPQL 242

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score = 50.4 bits (119), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 6/79 (7%)
Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIM---LVGTLAYMASEYISTGRVSKELDVFSFRVV 74
           D  F AK+ DFGLAR    E   + +M   +VGT AYMA E +  G ++ + D++SF VV
Sbjct: 161 DEAFTAKISDFGLARA--SEKFAQXVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVV 217
Query: 75  ALEIATGRKVINRYKAQKL 93
            LEI TG   ++ ++  +L
Sbjct: 218 LLEIITGLPAVDEHREPQL 236

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 28/70 (40%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIMLV--GTLAYMASEYISTGRVSKELDVFSFRVVA 75
           D NF  K+ DFG+++    ELG   +  V  GTL Y+  EY   GR++++ DV+SF VV 
Sbjct: 173 DENFVPKITDFGISK-KGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVL 231
Query: 76  LEIATGRKVI 85
            E+   R  I
Sbjct: 232 FEVLCARSAI 241

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 18  DFNFNAKLGDFGLARLMDH-ELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVAL 76
           D  F AK+ DFGLAR  +          +VGT AY A E +  G ++ + D++SF VV L
Sbjct: 158 DEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEALR-GEITPKSDIYSFGVVLL 216
Query: 77  EIATGRKVINRYKAQKL 93
           EI TG   ++ ++  +L
Sbjct: 217 EIITGLPAVDEHREPQL 233

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIMLV--GTLAYMASEYISTGRVSKELDVFSFRVVA 75
           D NF  K+ DFG+++    EL    +  V  GTL Y+  EY   GR++++ DV+SF VV 
Sbjct: 173 DENFVPKITDFGISK-KGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVL 231
Query: 76  LEIATGRKVI 85
            E+   R  I
Sbjct: 232 FEVLCARSAI 241

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	231
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	6e-35
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	4e-29
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	5e-23
3soc_A	322	Activin receptor type-2A; structural genomics cons	1e-13
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	6e-12
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	4e-11
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	1e-10
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	3e-10
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	1e-09
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	1e-09
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	2e-09
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	2e-09
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	5e-09
3q4u_A	301	Activin receptor type-1; structural genomics conso	7e-09
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	2e-08
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	3e-08
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	3e-08
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	5e-08
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	1e-07
2a19_B	284	Interferon-induced, double-stranded RNA-activated	2e-07
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	3e-07
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	4e-07
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	6e-07
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	6e-07
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	1e-06
3ork_A	311	Serine/threonine protein kinase; structural genomi	1e-06
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	2e-06
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	3e-06
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	5e-06
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	8e-06
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	9e-06
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	2e-05
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	2e-05
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	2e-05
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	3e-05
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	3e-05
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	3e-05
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	4e-05
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	4e-05
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	5e-05
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	6e-05
2dyl_A	318	Dual specificity mitogen-activated protein kinase	6e-05
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	9e-05
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	1e-04
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	1e-04
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	1e-04
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	1e-04
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	1e-04
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	2e-04
3aln_A	327	Dual specificity mitogen-activated protein kinase;	2e-04
3an0_A	340	Dual specificity mitogen-activated protein kinase;	2e-04
3fme_A	290	Dual specificity mitogen-activated protein kinase;	2e-04
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	2e-04
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	2e-04
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	3e-04
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	3e-04
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	4e-04
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	4e-04
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	5e-04
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	8e-04
3pls_A	298	Macrophage-stimulating protein receptor; protein k	9e-04
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	9e-04

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score =  125 bits (317), Expect = 6e-35
 Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 34/173 (19%)

Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALE 77
           D  F A +GDFGLA+LMD++    T  + GT+ ++A EY+STG+ S++ DVF + V+ LE
Sbjct: 168 DEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLE 227

Query: 78  IATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVW 137
           + TG++  +  +                           +  V+          L+ WV 
Sbjct: 228 LITGQRAFDLARL------------------------ANDDDVM----------LLDWVK 253

Query: 138 DLYGERKLLSAANERLDSRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVL 190
            L  E+KL +  +  L   + ++++  L+ V L C       RP + + +++L
Sbjct: 254 GLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 306

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score =  109 bits (276), Expect = 4e-29
 Identities = 43/182 (23%), Positives = 75/182 (41%), Gaps = 46/182 (25%)

Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIM---LVGTLAYMASEYISTGRVSKELDVFSFRVV 74
           D  F AK+ DFGLAR  +     +T+M   +VGT AYMA E +  G ++ + D++SF VV
Sbjct: 167 DEAFTAKISDFGLARASEK--FAQTVMTSRIVGTTAYMAPEAL-RGEITPKSDIYSFGVV 223

Query: 75  ALEIATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVA 134
            LEI TG   ++ ++  +                                       L+ 
Sbjct: 224 LLEIITGLPAVDEHREPQ--------------------------------------LLLD 245

Query: 135 WVWDLYGE-RKLLSAANERLDSRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFE 193
              ++  E + +    ++++ +  D   +  +  V   C H  +  RP I++  Q+L   
Sbjct: 246 IKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 304

Query: 194 TT 195
           T 
Sbjct: 305 TA 306

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 93.8 bits (234), Expect = 5e-23
 Identities = 36/187 (19%), Positives = 64/187 (34%), Gaps = 47/187 (25%)

Query: 18  DFNFNAKLGDFGLARLMDHELGPK------TIMLVGTLAYMASEYISTGRVSKELDVFSF 71
           D NF  K+ DFG+++      G +      + ++ GTL Y+  EY   GR++++ DV+SF
Sbjct: 173 DENFVPKITDFGISKK-----GTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSF 227

Query: 72  RVVALEIATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPK 131
            VV  E+   R  I +            P    N                          
Sbjct: 228 GVVLFEVLCARSAIVQSL----------PREMVN-------------------------- 251

Query: 132 LVAWVWDLYGERKLLSAANERLDSRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLN 191
           L  W  + +   +L    +  L  +   + +       + C       RPS+   +  L 
Sbjct: 252 LAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311

Query: 192 FETTMPN 198
           +   +  
Sbjct: 312 YALRLQE 318

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 67.8 bits (166), Expect = 1e-13
 Identities = 18/75 (24%), Positives = 29/75 (38%), Gaps = 6/75 (8%)

Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIM-LVGTLAYMASEYISTG-----RVSKELDVFSF 71
             N  A + DFGLA   +           VGT  YMA E +             +D+++ 
Sbjct: 165 KNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAM 224

Query: 72  RVVALEIATGRKVIN 86
            +V  E+A+     +
Sbjct: 225 GLVLWELASRCTAAD 239

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 62.7 bits (153), Expect = 6e-12
 Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 1/65 (1%)

Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALE 77
           D  +  K+ DFGL+RL             GT  +MA E +     +++ DV+SF V+  E
Sbjct: 173 DKKYTVKVCDFGLSRLKASTFLSSK-SAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWE 231

Query: 78  IATGR 82
           +AT +
Sbjct: 232 LATLQ 236

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 60.4 bits (147), Expect = 4e-11
 Identities = 25/73 (34%), Positives = 32/73 (43%), Gaps = 5/73 (6%)

Query: 11  ELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIM-LVGTLAYMASEYISTGRVSKELDVF 69
           +        N   K+ DFGLAR         T M   G  A+MA E I     SK  DV+
Sbjct: 143 QKVENGDLSNKILKITDFGLAREWHRT----TKMSAAGAYAWMAPEVIRASMFSKGSDVW 198

Query: 70  SFRVVALEIATGR 82
           S+ V+  E+ TG 
Sbjct: 199 SYGVLLWELLTGE 211

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 58.8 bits (143), Expect = 1e-10
 Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 4/69 (5%)

Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIM-LVGTLAYMASEYI---STGRVSKELDVFSFRV 73
             +   K+GDFGLA       G      L G++ +MA E I    +   S + DV++F +
Sbjct: 154 HEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGI 213

Query: 74  VALEIATGR 82
           V  E+ TG+
Sbjct: 214 VLYELMTGQ 222

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 57.7 bits (140), Expect = 3e-10
 Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 4/64 (6%)

Query: 20  NFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIA 79
               K+ DFG A  +   +        G+ A+MA E       S++ DVFS+ ++  E+ 
Sbjct: 142 GTVLKICDFGTACDIQTHMTNNK----GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVI 197

Query: 80  TGRK 83
           T RK
Sbjct: 198 TRRK 201

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 56.0 bits (135), Expect = 1e-09
 Identities = 17/86 (19%), Positives = 32/86 (37%), Gaps = 14/86 (16%)

Query: 18  DFNFNAKLGDFGLARLMDH-------ELGPKTIMLVGTLAYMASEYI-------STGRVS 63
             +    + DFGL+  +         E     I  VGT+ YMA E +             
Sbjct: 154 KNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESAL 213

Query: 64  KELDVFSFRVVALEIATGRKVINRYK 89
           K++D+++  ++  EI      +   +
Sbjct: 214 KQVDMYALGLIYWEIFMRCTDLFPGE 239

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 55.4 bits (134), Expect = 2e-09
 Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 6/68 (8%)

Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIST--GRVSKELDVFSFRVVA 75
           +    AK+ DFGL++   H +        G   +MA E I       +++ D +SF ++ 
Sbjct: 163 NAPVCAKVADFGLSQQSVHSVSGLL----GNFQWMAPETIGAEEESYTEKADTYSFAMIL 218

Query: 76  LEIATGRK 83
             I TG  
Sbjct: 219 YTILTGEG 226

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 54.4 bits (131), Expect = 5e-09
 Identities = 21/85 (24%), Positives = 31/85 (36%), Gaps = 9/85 (10%)

Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIML---VGTLAYMASE------YISTGRVSKELDV 68
             N    + D GLA   D       I     VGT  YMA E       +      K  D+
Sbjct: 181 KKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADI 240

Query: 69  FSFRVVALEIATGRKVINRYKAQKL 93
           ++  +V  EIA    +   ++  +L
Sbjct: 241 YAMGLVFWEIARRCSIGGIHEDYQL 265

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 53.9 bits (130), Expect = 7e-09
 Identities = 19/85 (22%), Positives = 30/85 (35%), Gaps = 9/85 (10%)

Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIML---VGTLAYMASE------YISTGRVSKELDV 68
             N    + D GLA +         +     VGT  YMA E       +      K +D+
Sbjct: 147 KKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDI 206

Query: 69  FSFRVVALEIATGRKVINRYKAQKL 93
           ++F +V  E+A         +  K 
Sbjct: 207 WAFGLVLWEVARRMVSNGIVEDYKP 231

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 52.3 bits (126), Expect = 2e-08
 Identities = 26/79 (32%), Positives = 34/79 (43%), Gaps = 13/79 (16%)

Query: 18  DFNFNAKLGDFGLARLMDHE-------------LGPKTIMLVGTLAYMASEYISTGRVSK 64
             N N  + DFGLARLM  E                K   +VG   +MA E I+     +
Sbjct: 142 RENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDE 201

Query: 65  ELDVFSFRVVALEIATGRK 83
           ++DVFSF +V  EI     
Sbjct: 202 KVDVFSFGIVLCEIIGRVN 220

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 52.4 bits (126), Expect = 3e-08
 Identities = 17/76 (22%), Positives = 25/76 (32%), Gaps = 13/76 (17%)

Query: 20  NFNAKLGDFGLARLMDHELGP----KTIMLVGTLAYMASEYISTGRV---------SKEL 66
           N    + DFGL  +           K  +  G L ++A E I              SK  
Sbjct: 165 NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHS 224

Query: 67  DVFSFRVVALEIATGR 82
           DVF+   +  E+    
Sbjct: 225 DVFALGTIWYELHARE 240

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 52.0 bits (125), Expect = 3e-08
 Identities = 18/85 (21%), Positives = 29/85 (34%), Gaps = 9/85 (10%)

Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIML---VGTLAYMASE------YISTGRVSKELDV 68
             N    + D GLA     +     I     VGT  YM  E        +  +     D+
Sbjct: 176 KKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADM 235

Query: 69  FSFRVVALEIATGRKVINRYKAQKL 93
           +SF ++  E+A         +  +L
Sbjct: 236 YSFGLILWEVARRCVSGGIVEEYQL 260

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 51.5 bits (124), Expect = 5e-08
 Identities = 21/61 (34%), Positives = 27/61 (44%)

Query: 22  NAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATG 81
            A L DFG+A     E   +    VGTL YMA E  S    +   D+++   V  E  TG
Sbjct: 172 FAYLVDFGIASATTDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTG 231

Query: 82  R 82
            
Sbjct: 232 S 232

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 50.0 bits (120), Expect = 1e-07
 Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 4/84 (4%)

Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALE 77
                 KLGDFGL   +      +     G   YMA E +         DVFS  +  LE
Sbjct: 191 GPRGRCKLGDFGLLVELGTAGAGEVQ--EGDPRYMAPELLQGSY-GTAADVFSLGLTILE 247

Query: 78  IATGRKVINRYKA-QKLRTQFVVP 100
           +A   ++ +  +  Q+LR  ++ P
Sbjct: 248 VACNMELPHGGEGWQQLRQGYLPP 271

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 49.6 bits (119), Expect = 2e-07
 Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 2/66 (3%)

Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALE 77
                 K+GDFGL   + ++         GTL YM+ E IS+    KE+D+++  ++  E
Sbjct: 156 VDTKQVKIGDFGLVTSLKNDGKRTRS--KGTLRYMSPEQISSQDYGKEVDLYALGLILAE 213

Query: 78  IATGRK 83
           +     
Sbjct: 214 LLHVCD 219

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 48.8 bits (117), Expect = 3e-07
 Identities = 12/68 (17%), Positives = 24/68 (35%), Gaps = 9/68 (13%)

Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYI---STGRVSKELDVFSFRVV 74
           D +  A++    +             M     A++A E +         +  D++SF V+
Sbjct: 147 DEDMTARISMADVKFSFQS----PGRM--YAPAWVAPEALQKKPEDTNRRSADMWSFAVL 200

Query: 75  ALEIATGR 82
             E+ T  
Sbjct: 201 LWELVTRE 208

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 48.5 bits (116), Expect = 4e-07
 Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 4/61 (6%)

Query: 22  NAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATG 81
           + K+GD GLA L       K +  +GT  +MA E        + +DV++F +  LE+AT 
Sbjct: 170 SVKIGDLGLATLK-RASFAKAV--IGTPEFMAPEMYEEK-YDESVDVYAFGMCMLEMATS 225

Query: 82  R 82
            
Sbjct: 226 E 226

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 48.0 bits (115), Expect = 6e-07
 Identities = 15/61 (24%), Positives = 29/61 (47%)

Query: 22  NAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATG 81
             K+ DFG+A+ +      +T  ++GT+ Y + E        +  D++S  +V  E+  G
Sbjct: 149 TLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVG 208

Query: 82  R 82
            
Sbjct: 209 E 209

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 48.5 bits (115), Expect = 6e-07
 Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 2/63 (3%)

Query: 20  NFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIA 79
               K+ D G A+ +D          VGTL Y+A E +   + +  +D +SF  +A E  
Sbjct: 160 RLIHKIIDLGYAKELDQGELCTE--FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECI 217

Query: 80  TGR 82
           TG 
Sbjct: 218 TGF 220

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 47.6 bits (113), Expect = 1e-06
 Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 11/75 (14%)

Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIM-----------LVGTLAYMASEYISTGRVSKEL 66
             +   K+GDFGL   MD +   +T++            VGT  YM+ E I     S ++
Sbjct: 198 TMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKV 257

Query: 67  DVFSFRVVALEIATG 81
           D+FS  ++  E+   
Sbjct: 258 DIFSLGLILFELLYS 272

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 47.2 bits (113), Expect = 1e-06
 Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 2/63 (3%)

Query: 22  NAKLGDFGLARLMDHELGPKTI--MLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIA 79
             K+ DFG+AR +       T    ++GT  Y++ E      V    DV+S   V  E+ 
Sbjct: 154 AVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVL 213

Query: 80  TGR 82
           TG 
Sbjct: 214 TGE 216

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 46.8 bits (111), Expect = 2e-06
 Identities = 19/83 (22%), Positives = 30/83 (36%), Gaps = 12/83 (14%)

Query: 10  PE--LPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRV----- 62
           P   +     D     KL DFG AR ++ +    +  L GT  Y+  +      +     
Sbjct: 140 PGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVS--LYGTEEYLHPDMYERAVLRKDHQ 197

Query: 63  ---SKELDVFSFRVVALEIATGR 82
                 +D++S  V     ATG 
Sbjct: 198 KKYGATVDLWSIGVTFYHAATGS 220

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 46.3 bits (110), Expect = 3e-06
 Identities = 19/83 (22%), Positives = 30/83 (36%), Gaps = 12/83 (14%)

Query: 10  PE--LPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRV----- 62
           P   +     D     KL DFG AR ++ +    +  L GT  Y+  +      +     
Sbjct: 140 PGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVS--LYGTEEYLHPDMYERAVLRKDHQ 197

Query: 63  ---SKELDVFSFRVVALEIATGR 82
                 +D++S  V     ATG 
Sbjct: 198 KKYGATVDLWSIGVTFYHAATGS 220

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 46.0 bits (109), Expect = 5e-06
 Identities = 11/60 (18%), Positives = 19/60 (31%), Gaps = 6/60 (10%)

Query: 23  AKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGR 82
            KL D G    ++         L GT  + A E I     +   D+++       +    
Sbjct: 220 LKLIDLGAVSRINS-----FGYLYGTPGFQAPE-IVRTGPTVATDIYTVGRTLAALTLDL 273

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 44.7 bits (106), Expect = 8e-06
 Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 11/74 (14%)

Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIML-----------VGTLAYMASEYISTGRVSKEL 66
             +   K+GDFGL   MD +   +T++            VGT  YM+ E I     S ++
Sbjct: 152 TMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKV 211

Query: 67  DVFSFRVVALEIAT 80
           D+FS  ++  E+  
Sbjct: 212 DIFSLGLILFELLY 225

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 44.7 bits (105), Expect = 9e-06
 Identities = 6/70 (8%), Positives = 12/70 (17%), Gaps = 5/70 (7%)

Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIS-----TGRVSKELDVFSFR 72
           D      L  F                        A   +         ++   D ++  
Sbjct: 245 DQRGGVFLTGFEHLVRDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLG 304

Query: 73  VVALEIATGR 82
           +    I    
Sbjct: 305 LAIYWIWCAD 314

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 44.1 bits (104), Expect = 2e-05
 Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 3/61 (4%)

Query: 22  NAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATG 81
             KL DFG++  +   +   +   VGT +YM+ E +     S + D++S  +  +E+A G
Sbjct: 170 EIKLCDFGVSGQLIDSMA-NSF--VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 226

Query: 82  R 82
           R
Sbjct: 227 R 227

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 44.0 bits (104), Expect = 2e-05
 Identities = 14/69 (20%), Positives = 27/69 (39%), Gaps = 5/69 (7%)

Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIM--LVGTLAYMASEYIS---TGRVSKELDVFSFR 72
                A + DFGL + +       +    + GT  ++A E +S       +  +D+FS  
Sbjct: 157 HGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAG 216

Query: 73  VVALEIATG 81
            V   + + 
Sbjct: 217 CVFYYVISE 225

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 43.5 bits (103), Expect = 2e-05
 Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 3/60 (5%)

Query: 24  KLGDFGLARLMDHELG-PKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGR 82
           KLGD GL R    +     ++  VGT  YM+ E I     + + D++S   +  E+A  +
Sbjct: 176 KLGDLGLGRFFSSKTTAAHSL--VGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQ 233

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 43.1 bits (102), Expect = 3e-05
 Identities = 12/82 (14%), Positives = 26/82 (31%), Gaps = 8/82 (9%)

Query: 3   EVAYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYI--STG 60
               +                K+GD G    +     P+     G   ++A+E +  +  
Sbjct: 153 IPNAASEEGDEDDWASNKVMFKIGDLGHVTRISS---PQV--EEGDSRFLANEVLQENYT 207

Query: 61  RVSKELDVFSFRVVALEIATGR 82
            + K  D+F+  +  +  A   
Sbjct: 208 HLPKA-DIFALALTVVCAAGAE 228

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 43.0 bits (102), Expect = 3e-05
 Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 1/63 (1%)

Query: 20  NFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIA 79
             N KLGDFGLAR+++H+        VGT  YM+ E ++    +++ D++S   +  E+ 
Sbjct: 152 KQNVKLGDFGLARILNHDT-SFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELC 210

Query: 80  TGR 82
              
Sbjct: 211 ALM 213

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 43.2 bits (102), Expect = 3e-05
 Identities = 15/63 (23%), Positives = 32/63 (50%), Gaps = 1/63 (1%)

Query: 20  NFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIA 79
           +   +LGDFG+AR+++  +       +GT  Y++ E       + + D+++   V  E+ 
Sbjct: 161 DGTVQLGDFGIARVLNSTV-ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELC 219

Query: 80  TGR 82
           T +
Sbjct: 220 TLK 222

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 42.7 bits (101), Expect = 4e-05
 Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 14/78 (17%)

Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIML-------------VGTLAYMASEYIS-TGRVS 63
           D + N K+GDFGLA+ +   L    +               +GT  Y+A+E +  TG  +
Sbjct: 150 DESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYN 209

Query: 64  KELDVFSFRVVALEIATG 81
           +++D++S  ++  E+   
Sbjct: 210 EKIDMYSLGIIFFEMIYP 227

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 42.8 bits (101), Expect = 4e-05
 Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 4/64 (6%)

Query: 23  AKLGDFGLARLMDHELGPKTIM----LVGTLAYMASEYISTGRVSKELDVFSFRVVALEI 78
           A L DFG A  +  +   K+++    + GT  +MA E +       ++D++S   + L +
Sbjct: 190 AALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHM 249

Query: 79  ATGR 82
             G 
Sbjct: 250 LNGC 253

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 42.3 bits (99), Expect = 5e-05
 Identities = 9/67 (13%), Positives = 21/67 (31%), Gaps = 6/67 (8%)

Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYI--STGRVSKELDVFSFRVVA 75
             +    LGD         ++G +       + Y   E++  ST   +  L+ +   +  
Sbjct: 228 MPDGRLMLGDVSALW----KVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSI 283

Query: 76  LEIATGR 82
             +    
Sbjct: 284 YRVWCLF 290

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 42.5 bits (100), Expect = 6e-05
 Identities = 20/88 (22%), Positives = 32/88 (36%), Gaps = 10/88 (11%)

Query: 4   VAYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIML---VGTLAYMASEYIS-- 58
           V+ S         G  N    + DFGL + +D         L    GT  + A E +   
Sbjct: 148 VSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEES 207

Query: 59  -----TGRVSKELDVFSFRVVALEIATG 81
                  R+++ +D+FS   V   I + 
Sbjct: 208 NNLQTKRRLTRSIDIFSMGCVFYYILSK 235

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 42.0 bits (99), Expect = 6e-05
 Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 7/66 (10%)

Query: 22  NAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKE-----LDVFSFRVVAL 76
             KL DFG++  +  +         G  AYMA E I     +K       DV+S  +  +
Sbjct: 163 QIKLCDFGISGRLVDDKAKDR--SAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLV 220

Query: 77  EIATGR 82
           E+ATG+
Sbjct: 221 ELATGQ 226

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 41.5 bits (98), Expect = 9e-05
 Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 5/64 (7%)

Query: 22  NAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYI---STGRVSKELDVFSFRVVALEI 78
             K+ DFG ++ +   + P T    GTL YMA E I     G      D++S     +E+
Sbjct: 161 VLKISDFGTSKRLA-GINPCTETFTGTLQYMAPEIIDKGPRGYGKA-ADIWSLGCTIIEM 218

Query: 79  ATGR 82
           ATG+
Sbjct: 219 ATGK 222

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 41.5 bits (97), Expect = 1e-04
 Identities = 14/80 (17%), Positives = 24/80 (30%), Gaps = 5/80 (6%)

Query: 6   YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLV---GTLAYMASEYISTGRV 62
                       D +    L D G +  M  +L PK  +      T  +   E +S    
Sbjct: 205 LGNGFLEQDDEDDLSAGLALIDLGQSIDM--KLFPKGTIFTAKCETSGFQCVEMLSNKPW 262

Query: 63  SKELDVFSFRVVALEIATGR 82
           + ++D F        +  G 
Sbjct: 263 NYQIDYFGVAATVYCMLFGT 282

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 41.4 bits (97), Expect = 1e-04
 Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 2/62 (3%)

Query: 20  NFNAKLGDFGLARLM-DHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEI 78
           N   K+ DFGLARL+ D+E   +       + + A E    GR + + DV+SF ++  E+
Sbjct: 399 NLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTEL 457

Query: 79  AT 80
            T
Sbjct: 458 TT 459

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 41.3 bits (97), Expect = 1e-04
 Identities = 20/61 (32%), Positives = 32/61 (52%)

Query: 20  NFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIA 79
           N   K+ DFGL+RLM  +           + + A E ++  + S + DV++F V+  EIA
Sbjct: 354 NHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 413

Query: 80  T 80
           T
Sbjct: 414 T 414

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 41.3 bits (97), Expect = 1e-04
 Identities = 18/73 (24%), Positives = 27/73 (36%), Gaps = 12/73 (16%)

Query: 22  NAKLGDFGLARLM-DHELGPKTIMLVGTLAYMASEYIS-----------TGRVSKELDVF 69
             KL DFG+A  M            VG + YM  E I              ++S + DV+
Sbjct: 192 MLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVW 251

Query: 70  SFRVVALEIATGR 82
           S   +   +  G+
Sbjct: 252 SLGCILYYMTYGK 264

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 41.3 bits (97), Expect = 1e-04
 Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 2/62 (3%)

Query: 20  NFNAKLGDFGLARLM-DHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEI 78
           N   K+ DFGLARL+ D+E   +       + + A E    GR + + DV+SF ++  E+
Sbjct: 316 NLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSDVWSFGILLTEL 374

Query: 79  AT 80
            T
Sbjct: 375 TT 376

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 40.8 bits (96), Expect = 2e-04
 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%)

Query: 22  NAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATG 81
             KL DFG+A  +      +    VGT  +MA E I       + D++S  + A+E+A G
Sbjct: 157 EVKLADFGVAGQLTDTQIKRNTF-VGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARG 215

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 40.8 bits (96), Expect = 2e-04
 Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 6/65 (9%)

Query: 22  NAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKE----LDVFSFRVVALE 77
           N KL DFG++  +   +  KT    G   YMA E I      +      DV+S  +   E
Sbjct: 164 NIKLCDFGISGQLVDSIA-KTRD-AGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYE 221

Query: 78  IATGR 82
           +ATGR
Sbjct: 222 LATGR 226

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 40.7 bits (96), Expect = 2e-04
 Identities = 16/65 (24%), Positives = 28/65 (43%), Gaps = 6/65 (9%)

Query: 22  NAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKE----LDVFSFRVVALE 77
             K+ DFG++  +  ++        G   YMA E I+     K      D++S  +  +E
Sbjct: 148 QVKMCDFGISGYLVDDVAKDI--DAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIE 205

Query: 78  IATGR 82
           +A  R
Sbjct: 206 LAILR 210

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 41.0 bits (96), Expect = 2e-04
 Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 6/64 (9%)

Query: 20  NFNAKLGDFGLARLMDHE---LGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVAL 76
           N   KLGDFGL+R M+        K  + +    +MA E I+  R +   DV+ F V   
Sbjct: 527 NDCVKLGDFGLSRYMEDSTYYKASKGKLPI---KWMAPESINFRRFTSASDVWMFGVCMW 583

Query: 77  EIAT 80
           EI  
Sbjct: 584 EILM 587

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 40.4 bits (95), Expect = 2e-04
 Identities = 14/60 (23%), Positives = 30/60 (50%), Gaps = 5/60 (8%)

Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRV---SKELDVFSFRVV 74
           + +   K+ DFG ++++      +T  L GT  Y+A E + +      ++ +D +S  V+
Sbjct: 276 EEDCLIKITDFGHSKILGETSLMRT--LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVI 333

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 40.1 bits (94), Expect = 3e-04
 Identities = 20/73 (27%), Positives = 29/73 (39%), Gaps = 12/73 (16%)

Query: 22  NAKLGDFGLARLM-DHELGPKTIMLVGTLAYMASEYI-----------STGRVSKELDVF 69
             KL DFG+A  M            VGT+ YM  E I           S  ++S + DV+
Sbjct: 145 MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVW 204

Query: 70  SFRVVALEIATGR 82
           S   +   +  G+
Sbjct: 205 SLGCILYYMTYGK 217

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 40.1 bits (94), Expect = 3e-04
 Identities = 20/85 (23%), Positives = 35/85 (41%), Gaps = 2/85 (2%)

Query: 20  NFNAKLGDFGLARLMDHELGPKTIMLVGTL--AYMASEYISTGRVSKELDVFSFRVVALE 77
               K+GDFGL +++  +     +   G     + A E ++  + S   DV+SF VV  E
Sbjct: 181 ENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYE 240

Query: 78  IATGRKVINRYKAQKLRTQFVVPHP 102
           + T  +      A+ +R        
Sbjct: 241 LFTYIEKSKSPPAEFMRMIGNDKQG 265

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 40.0 bits (94), Expect = 4e-04
 Identities = 20/85 (23%), Positives = 35/85 (41%), Gaps = 2/85 (2%)

Query: 20  NFNAKLGDFGLARLMDHELGPKTIMLVGTL--AYMASEYISTGRVSKELDVFSFRVVALE 77
               K+GDFGL +++  +     +   G     + A E ++  + S   DV+SF VV  E
Sbjct: 150 ENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYE 209

Query: 78  IATGRKVINRYKAQKLRTQFVVPHP 102
           + T  +      A+ +R        
Sbjct: 210 LFTYIEKSKSPPAEFMRMIGNDKQG 234

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 40.0 bits (94), Expect = 4e-04
 Identities = 20/73 (27%), Positives = 29/73 (39%), Gaps = 12/73 (16%)

Query: 22  NAKLGDFGLARLM-DHELGPKTIMLVGTLAYMASEYI-----------STGRVSKELDVF 69
             KL DFG+A  M            VGT+ YM  E I           S  ++S + DV+
Sbjct: 164 MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVW 223

Query: 70  SFRVVALEIATGR 82
           S   +   +  G+
Sbjct: 224 SLGCILYYMTYGK 236

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 39.6 bits (93), Expect = 5e-04
 Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 5/68 (7%)

Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRV---SKELDVFSFRVV 74
           D + +  + DF +A ++  E    T  + GT  YMA E  S+ +    S  +D +S  V 
Sbjct: 149 DEHGHVHITDFNIAAMLPRETQITT--MAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVT 206

Query: 75  ALEIATGR 82
           A E+  GR
Sbjct: 207 AYELLRGR 214

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 38.8 bits (90), Expect = 8e-04
 Identities = 7/76 (9%), Positives = 17/76 (22%), Gaps = 16/76 (21%)

Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIST-----------GRVSKEL 66
           D      L  F         +     +   +  +   E  +              ++   
Sbjct: 240 DQRGGVFLTGFEHLVRDGARV-----VSSVSRGFEPPELEARRATISYHRDRRTLMTFSF 294

Query: 67  DVFSFRVVALEIATGR 82
           D ++  +V   I    
Sbjct: 295 DAWALGLVIYWIWCAD 310

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 38.4 bits (90), Expect = 9e-04
 Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 3/64 (4%)

Query: 20  NFNAKLGDFGLARLM-DHELGPKTIMLVGTL--AYMASEYISTGRVSKELDVFSFRVVAL 76
           +F  K+ DFGLAR + D E           L   + A E + T R + + DV+SF V+  
Sbjct: 160 SFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLW 219

Query: 77  EIAT 80
           E+ T
Sbjct: 220 ELLT 223

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 38.8 bits (91), Expect = 9e-04
 Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 7/65 (10%)

Query: 20  NFNAKLGDFGLARLMDHELGPKTIMLVGTLAY----MASEYISTGRVSKELDVFSFRVVA 75
               K+ DFG++R     +        G         A E ++ GR S E DV+SF ++ 
Sbjct: 249 KNVLKISDFGMSREEADGV---YAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILL 305

Query: 76  LEIAT 80
            E  +
Sbjct: 306 WETFS 310

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	231
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.97
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.96
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.96
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.96
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.96
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.96
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.96
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.96
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.96
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.96
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.96
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.96
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.96
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.96
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.95
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.95
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.94
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.93
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.93
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.92
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.92
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.91
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.91
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.91
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.91
3niz_A	311	Rhodanese family protein; structural genomics, str	99.91
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.91
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.91
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.91
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.9
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.9
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.9
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.9
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.9
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.9
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.9
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.9
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.9
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.9
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.9
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.9
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.9
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.9
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.9
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.9
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.9
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.9
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.9
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.9
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.9
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.9
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.9
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.89
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.89
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.89
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.89
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.89
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.89
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.89
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.89
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.89
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.89
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.89
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.89
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.89
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.89
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.89
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.89
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.89
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.89
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.89
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.89
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.89
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.89
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.89
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.89
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.89
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.89
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.89
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.89
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.89
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.89
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.89
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.89
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.89
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.89
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.89
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.89
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.89
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.89
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.89
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.89
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.89
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.89
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.89
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.89
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.89
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.88
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.88
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.88
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.88
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.88
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.88
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.88
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.88
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.88
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.88
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.88
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.88
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.88
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.88
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.88
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.88
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.88
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.88
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.88
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.88
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.88
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.88
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.88
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.88
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.88
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.88
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.88
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.88
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.88
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.88
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.88
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.88
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.88
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.88
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.88
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.88
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.88
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.88
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.88
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.88
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.88
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.88
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.88
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.88
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.88
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.88
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.88
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.88
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.88
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.88
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.88
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.88
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.88
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.88
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.88
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.88
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.88
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.88
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.88
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.87
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.87
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.87
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.87
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.87
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.87
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.87
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.87
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.87
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.87
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.87
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.87
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.87
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.87
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.87
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.87
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.87
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.87
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.87
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.87
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.87
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.87
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.87
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.87
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.87
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.87
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.87
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.87
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.87
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.87
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.87
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.87
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.87
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.87
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.87
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.87
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.87
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.87
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.87
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.87
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.86
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.86
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.86
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.86
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.86
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.86
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.86
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.86
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.86
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.86
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.86
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.86
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.86
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.86
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.86
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.86
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.86
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.86
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.86
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.86
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.86
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.86
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.86
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.86
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.86
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.86
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.85
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.85
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.85
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.85
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.85
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.85
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.85
3bhy_A	283	Death-associated protein kinase 3; death associate	99.85
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.85
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.85
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.85
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.85
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.84
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.84
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.84
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.84
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.84
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.84
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.84
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.84
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.84
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.82
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.82
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.79
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.76
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.75
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.74
3uqc_A	286	Probable conserved transmembrane protein; structur	99.59
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.41
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	98.91
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	98.22
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	97.61
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	95.27
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	94.64
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	94.43
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	92.68
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	90.73
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	89.4
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	86.94
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	85.52
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	85.46
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	84.74
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	83.96
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	83.33
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	80.91
3ats_A	357	Putative uncharacterized protein; hypothetical pro	80.62

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.97  E-value=5.6e-31  Score=217.14  Aligned_cols=141  Identities=21%  Similarity=0.167  Sum_probs=107.6

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+|||++.++.+||+|||+++.+.... ....+.+||+.|+|||++.+..|+.++||||+||++|||++|+.||
T Consensus       192 iHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~-~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF  270 (346)
T 4fih_A          192 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV-PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY  270 (346)
T ss_dssp             ECCCCSGGGEEECTTCCEEECCCTTCEECCSSS-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTT
T ss_pred             ccccCCHHHEEECCCCCEEEecCcCceecCCCC-CcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCC
Confidence            599999999999999999999999998765322 2235578999999999998888999999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      ...........+....                                                .+.+.  ........+
T Consensus       271 ~~~~~~~~~~~i~~~~------------------------------------------------~~~~~--~~~~~s~~~  300 (346)
T 4fih_A          271 FNEPPLKAMKMIRDNL------------------------------------------------PPRLK--NLHKVSPSL  300 (346)
T ss_dssp             TTSCHHHHHHHHHHSS------------------------------------------------CCCCS--CGGGSCHHH
T ss_pred             CCcCHHHHHHHHHcCC------------------------------------------------CCCCC--ccccCCHHH
Confidence            7654332222111100                                                00110  001112356


Q ss_pred             HHHHHhhcCCCCCCCCCHHHHHHHHhcccCCC
Q 045790          166 LIVGLWCAHPDRCFRPSIRQAIQVLNFETTMP  197 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~~  197 (231)
                      .+|+.+||+.||++|||+.|+++|+++....+
T Consensus       301 ~dli~~~L~~dP~~R~ta~e~l~Hp~~~~~~~  332 (346)
T 4fih_A          301 KGFLDRLLVRDPAQRATAAELLKHPFLAKAGP  332 (346)
T ss_dssp             HHHHHHHSCSSTTTSCCHHHHTTCGGGGGCCC
T ss_pred             HHHHHHHcCCChhHCcCHHHHhcCHhhcCCCC
Confidence            78899999999999999999999999977554

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.96  E-value=4.8e-31  Score=217.08  Aligned_cols=140  Identities=19%  Similarity=0.149  Sum_probs=98.9

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCC-ceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGP-KTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~   83 (231)
                      .||||||+|||++.++.+||+|||+++........ ......||+.|||||++.+..++.++|||||||++|||++ |+.
T Consensus       180 iHRDLKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~  259 (329)
T 4aoj_A          180 VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQ  259 (329)
T ss_dssp             CCSCCCGGGEEEETTTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred             ecccccHhhEEECCCCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCC
Confidence            59999999999999999999999999876433222 2344678999999999999999999999999999999998 899


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||......                                       .+...+.+   .          .+...+..+..
T Consensus       260 Pf~~~~~~---------------------------------------~~~~~i~~---g----------~~~~~p~~~~~  287 (329)
T 4aoj_A          260 PWYQLSNT---------------------------------------EAIDCITQ---G----------RELERPRACPP  287 (329)
T ss_dssp             TTCSSCHH---------------------------------------HHHHHHHH---T----------CCCCCCTTCCH
T ss_pred             CCCCCCHH---------------------------------------HHHHHHHc---C----------CCCCCcccccH
Confidence            99754422                                       11111110   0          01112222335


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCCC
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTMP  197 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~~  197 (231)
                      .+.+|+.+||+.||++||||.||+++|+.....|
T Consensus       288 ~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~p  321 (329)
T 4aoj_A          288 EVYAIMRGCWQREPQQRHSIKDVHARLQALAQAP  321 (329)
T ss_dssp             HHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhCC
Confidence            6788999999999999999999999998765443

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.96  E-value=4.1e-31  Score=215.61  Aligned_cols=136  Identities=19%  Similarity=0.146  Sum_probs=104.2

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCC-CceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELG-PKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~   83 (231)
                      .||||||+|||++.++.+||+|||+++....... .......||+.|+|||++.+..++.++|||||||++|||++ |..
T Consensus       167 iHRDLK~~NILl~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~  246 (308)
T 4gt4_A          167 VHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQ  246 (308)
T ss_dssp             CCSCCSGGGEEECGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCC
T ss_pred             CCCCccccceEECCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCC
Confidence            5999999999999999999999999986643222 12344578999999999999999999999999999999998 899


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||......+                                       +...+   . ..         .....+..+..
T Consensus       247 Pf~~~~~~~---------------------------------------~~~~i---~-~~---------~~~~~p~~~~~  274 (308)
T 4gt4_A          247 PYCGYSNQD---------------------------------------VVEMI---R-NR---------QVLPCPDDCPA  274 (308)
T ss_dssp             TTTTCCHHH---------------------------------------HHHHH---H-TT---------CCCCCCTTCCH
T ss_pred             CCCCCCHHH---------------------------------------HHHHH---H-cC---------CCCCCcccchH
Confidence            997654321                                       11111   1 00         11112223345


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhcc
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNFE  193 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~~  193 (231)
                      .+.+|+.+||+.||++||||.||+++|+..
T Consensus       275 ~~~~li~~C~~~dP~~RPs~~ei~~~L~a~  304 (308)
T 4gt4_A          275 WVYALMIECWNEFPSRRPRFKDIHSRLRAW  304 (308)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred             HHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence            678899999999999999999999999753

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.96  E-value=3.7e-31  Score=219.56  Aligned_cols=136  Identities=22%  Similarity=0.164  Sum_probs=103.4

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCC-ceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGP-KTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~   83 (231)
                      .||||||+|||++.++.+||+|||+++.+...... ......||+.|||||++.+..|+.++|||||||++|||++ |..
T Consensus       207 iHRDLK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~  286 (353)
T 4ase_A          207 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS  286 (353)
T ss_dssp             CCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCC
T ss_pred             ecCccCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCC
Confidence            59999999999999999999999999876543322 2344678999999999999999999999999999999998 899


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||......                                      ..+..    ...         ...+...+.....
T Consensus       287 Pf~~~~~~--------------------------------------~~~~~----~i~---------~g~~~~~p~~~~~  315 (353)
T 4ase_A          287 PYPGVKID--------------------------------------EEFCR----RLK---------EGTRMRAPDYTTP  315 (353)
T ss_dssp             SSTTCCCS--------------------------------------HHHHH----HHH---------HTCCCCCCTTCCH
T ss_pred             CCCCCCHH--------------------------------------HHHHH----HHH---------cCCCCCCCccCCH
Confidence            99753211                                      01111    111         1111112222345


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      .+.+++.+||+.||++|||+.||++||..
T Consensus       316 ~~~~li~~c~~~dP~~RPt~~eil~~L~~  344 (353)
T 4ase_A          316 EMYQTMLDCWHGEPSQRPTFSELVEHLGN  344 (353)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHHHHHcCcChhHCcCHHHHHHHHHH
Confidence            67889999999999999999999999875

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.96  E-value=1.4e-30  Score=212.04  Aligned_cols=142  Identities=21%  Similarity=0.243  Sum_probs=99.0

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCC-CceeEeeccccccchhhhhh---CCCCCCcccHhHHHHHHHHHhC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELG-PKTIMLVGTLAYMASEYIST---GRVSKELDVFSFRVVALEIATG   81 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~---~~~~~~~Dv~s~G~vl~el~~g   81 (231)
                      .||||||+|||++.++.+||+|||+++....... ......+||+.|||||++.+   ..|+.++|||||||++|||++|
T Consensus       154 iHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg  233 (307)
T 3omv_A          154 IHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTG  233 (307)
T ss_dssp             BCSCCCSSSEEEETTEEEEECCCSSCBC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHS
T ss_pred             cCCccCHHHEEECCCCcEEEeeccCceecccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHC
Confidence            5999999999999999999999999987643221 22345689999999999964   3588999999999999999999


Q ss_pred             CCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHH
Q 045790           82 RKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQ  161 (231)
Q Consensus        82 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  161 (231)
                      +.||.......                                          .+.......    ...+.+ ......+
T Consensus       234 ~~Pf~~~~~~~------------------------------------------~~~~~~~~~----~~~p~~-~~~~~~~  266 (307)
T 3omv_A          234 ELPYSHINNRD------------------------------------------QIIFMVGRG----YASPDL-SKLYKNC  266 (307)
T ss_dssp             SCTTTTCCCHH------------------------------------------HHHHHHHTT----CCCCCS-TTSCTTS
T ss_pred             CCCCCCCChHH------------------------------------------HHHHHHhcC----CCCCCc-ccccccc
Confidence            99997533110                                          011111000    001111 1112223


Q ss_pred             HHHHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          162 MTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       162 ~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      ...+.+|+.+||+.||++||||.||+++|+..+
T Consensus       267 ~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~  299 (307)
T 3omv_A          267 PKAMKRLVADCVKKVKEERPLFPQILSSIELLQ  299 (307)
T ss_dssp             CHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence            456788999999999999999999999998654

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.96  E-value=2.1e-30  Score=207.84  Aligned_cols=137  Identities=21%  Similarity=0.127  Sum_probs=95.8

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCC-CCCcccHhHHHHHHHHHhCCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRV-SKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      .||||||+|||++.++.+||+|||+++.....  ....+.+||+.|+|||++.+..+ +.++||||+||++++|++|+.|
T Consensus       134 iHRDiKP~NILl~~~~~vkl~DFGla~~~~~~--~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~P  211 (275)
T 3hyh_A          134 VHRDLKPENLLLDEHLNVKIADFGLSNIMTDG--NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLP  211 (275)
T ss_dssp             CCCCCCTTTEEECTTCCEEECCSSCC-----------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             ccccCChHHeEECCCCCEEEeecCCCeecCCC--CccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCC
Confidence            49999999999999999999999999876432  22345789999999999987775 5789999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |...........+                                          ....       ..+...    ....
T Consensus       212 F~~~~~~~~~~~i------------------------------------------~~~~-------~~~p~~----~s~~  238 (275)
T 3hyh_A          212 FDDESIPVLFKNI------------------------------------------SNGV-------YTLPKF----LSPG  238 (275)
T ss_dssp             SCCSSHHHHHHHH------------------------------------------HHTC-------CCCCTT----SCHH
T ss_pred             CCCCCHHHHHHHH------------------------------------------HcCC-------CCCCCC----CCHH
Confidence            9754432111111                                          1000       011111    1234


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhcccCCC
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNFETTMP  197 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~~  197 (231)
                      +.+|+.+||+.||++|||+.|+++|+|+....|
T Consensus       239 ~~~li~~~L~~dP~~R~s~~eil~hpw~k~~~p  271 (275)
T 3hyh_A          239 AAGLIKRMLIVNPLNRISIHEIMQDDWFKVDLP  271 (275)
T ss_dssp             HHHHHHHHSCSSGGGSCCHHHHHHCHHHHTTCC
T ss_pred             HHHHHHHHccCChhHCcCHHHHHcCcccccCCC
Confidence            578899999999999999999999999976654

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.96  E-value=3.8e-30  Score=217.21  Aligned_cols=141  Identities=21%  Similarity=0.176  Sum_probs=107.6

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+|||++.++.+||+|||+++.+.... ....+.+||+.|||||++.+..|+.++||||+||++|||++|+.||
T Consensus       269 iHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~-~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF  347 (423)
T 4fie_A          269 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV-PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY  347 (423)
T ss_dssp             ECCCCSTTTEEECTTCCEEECCCTTCEECCSSC-CCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTT
T ss_pred             ecccCCHHHEEEcCCCCEEEecCccceECCCCC-ccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCC
Confidence            599999999999999999999999998765332 2345678999999999998888999999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      ...........+....                                                .+.+..  .......+
T Consensus       348 ~~~~~~~~~~~i~~~~------------------------------------------------~~~~~~--~~~~s~~~  377 (423)
T 4fie_A          348 FNEPPLKAMKMIRDNL------------------------------------------------PPRLKN--LHKVSPSL  377 (423)
T ss_dssp             TTSCHHHHHHHHHHSC------------------------------------------------CCCCSC--TTSSCHHH
T ss_pred             CCcCHHHHHHHHHcCC------------------------------------------------CCCCcc--cccCCHHH
Confidence            7654332222211110                                                011100  00112356


Q ss_pred             HHHHHhhcCCCCCCCCCHHHHHHHHhcccCCC
Q 045790          166 LIVGLWCAHPDRCFRPSIRQAIQVLNFETTMP  197 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~~  197 (231)
                      .+|+.+||+.||++|||+.||++|+++....+
T Consensus       378 ~dli~~~L~~dP~~R~ta~ell~Hp~~~~~~~  409 (423)
T 4fie_A          378 KGFLDRLLVRDPAQRATAAELLKHPFLAKAGP  409 (423)
T ss_dssp             HHHHHHHSCSSTTTSCCHHHHTTCGGGGGCCC
T ss_pred             HHHHHHHcCCChhHCcCHHHHhcCHHhcCCCC
Confidence            78899999999999999999999999976543

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.96  E-value=1.1e-29  Score=205.24  Aligned_cols=135  Identities=19%  Similarity=0.197  Sum_probs=99.4

Q ss_pred             eecCCCCCCeeeCC-CCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCc
Q 045790            6 YSRSPELPPGRGDF-NFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~-~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      .||||||+|||++. ++.+||+|||+++....   ....+.+||+.|||||++. ..++.++||||+||++|+|++|+.|
T Consensus       153 iHRDlKp~NILl~~~~g~vKl~DFGla~~~~~---~~~~~~~GTp~YmAPE~~~-~~y~~~~DiwSlGvilyelltg~~P  228 (290)
T 3fpq_A          153 IHRDLKCDNIFITGPTGSVKIGDLGLATLKRA---SFAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYP  228 (290)
T ss_dssp             CCCCCCGGGEEESSTTSCEEECCTTGGGGCCT---TSBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCT
T ss_pred             EecccChhheeEECCCCCEEEEeCcCCEeCCC---CccCCcccCccccCHHHcC-CCCCcHHHHHHHHHHHHHHHHCCCC
Confidence            69999999999984 78999999999986432   2345678999999999985 4699999999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |......                                         ........... ..    +.....    ....
T Consensus       229 f~~~~~~-----------------------------------------~~~~~~i~~~~-~~----~~~~~~----~~~~  258 (290)
T 3fpq_A          229 YSECQNA-----------------------------------------AQIYRRVTSGV-KP----ASFDKV----AIPE  258 (290)
T ss_dssp             TTTCSSH-----------------------------------------HHHHHHHTTTC-CC----GGGGGC----CCHH
T ss_pred             CCCCCcH-----------------------------------------HHHHHHHHcCC-CC----CCCCcc----CCHH
Confidence            9643211                                         11111111000 00    011111    1234


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      +.+|+.+||+.||++|||+.|+++|+++..
T Consensus       259 ~~~li~~~L~~dP~~R~s~~e~l~Hp~~~~  288 (290)
T 3fpq_A          259 VKEIIEGCIRQNKDERYSIKDLLNHAFFQE  288 (290)
T ss_dssp             HHHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred             HHHHHHHHccCChhHCcCHHHHhcCccccC
Confidence            678899999999999999999999999864

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.96  E-value=1.2e-30  Score=212.02  Aligned_cols=137  Identities=19%  Similarity=0.155  Sum_probs=103.7

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCc-eeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPK-TIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~   83 (231)
                      .||||||+|||++.++.+||+|||+++......... .....||+.|+|||++.+..++.++|||||||++|||++ |+.
T Consensus       150 iHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~  229 (299)
T 4asz_A          150 VHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQ  229 (299)
T ss_dssp             CCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCC
T ss_pred             ccCccCHhhEEECCCCcEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCC
Confidence            599999999999999999999999998764332211 223568999999999999999999999999999999998 899


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||......                                       .+...+.+    .         .....+..+..
T Consensus       230 Pf~~~~~~---------------------------------------~~~~~i~~----~---------~~~~~p~~~~~  257 (299)
T 4asz_A          230 PWYQLSNN---------------------------------------EVIECITQ----G---------RVLQRPRTCPQ  257 (299)
T ss_dssp             TTTTSCHH---------------------------------------HHHHHHHH----T---------CCCCCCTTCCH
T ss_pred             CCCCCCHH---------------------------------------HHHHHHHc----C---------CCCCCCccchH
Confidence            99754422                                       11111110    0         00112222345


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      .+.+|+.+||+.||++|||+.+|++.|+...
T Consensus       258 ~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~  288 (299)
T 4asz_A          258 EVYELMLGCWQREPHMRKNIKGIHTLLQNLA  288 (299)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence            6788999999999999999999999987643

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.96  E-value=8.9e-31  Score=216.27  Aligned_cols=137  Identities=15%  Similarity=0.156  Sum_probs=104.4

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+|||++.++.+||+|||+++.+.... ......+||+.|+|||++.+..|+.++||||+||++|+|++|+.||
T Consensus       147 iHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~-~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF  225 (350)
T 4b9d_A          147 LHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV-ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAF  225 (350)
T ss_dssp             EETTCCGGGEEECTTCCEEECSTTEESCCCHHH-HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSC
T ss_pred             eeccCCHHHEEECCCCCEEEcccccceeecCCc-ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCC
Confidence            599999999999999999999999998764211 1123467999999999999888999999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      ...........+..                                          .. .     +....    .....+
T Consensus       226 ~~~~~~~~~~~i~~------------------------------------------~~-~-----~~~~~----~~s~~~  253 (350)
T 4b9d_A          226 EAGSMKNLVLKIIS------------------------------------------GS-F-----PPVSL----HYSYDL  253 (350)
T ss_dssp             CCSSHHHHHHHHHH------------------------------------------TC-C-----CCCCT----TSCHHH
T ss_pred             CCcCHHHHHHHHHc------------------------------------------CC-C-----CCCCc----cCCHHH
Confidence            76543322222111                                          00 0     01111    112346


Q ss_pred             HHHHHhhcCCCCCCCCCHHHHHHHHhcccC
Q 045790          166 LIVGLWCAHPDRCFRPSIRQAIQVLNFETT  195 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps~~ell~~l~~~~~  195 (231)
                      .+|+.+||+.||++|||+.|+++|+++...
T Consensus       254 ~~li~~~L~~dP~~R~s~~e~l~hp~~~~~  283 (350)
T 4b9d_A          254 RSLVSQLFKRNPRDRPSVNSILEKGFIAKR  283 (350)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHTSHHHHTT
T ss_pred             HHHHHHHccCChhHCcCHHHHhcCHHhhcC
Confidence            788999999999999999999999987543

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.96  E-value=7.9e-30  Score=209.65  Aligned_cols=138  Identities=15%  Similarity=0.040  Sum_probs=99.6

Q ss_pred             eecCCCCCCeeeCCCC-cEEEeccccccccCCCCCCc----eeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh
Q 045790            6 YSRSPELPPGRGDFNF-NAKLGDFGLARLMDHELGPK----TIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT   80 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~-~~kl~Dfg~~~~~~~~~~~~----~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~   80 (231)
                      .||||||+|||++.++ .+||+|||+++.+.......    ....+||+.|||||++.+..++.++||||+||++|||++
T Consensus       172 iHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemlt  251 (336)
T 4g3f_A          172 LHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLN  251 (336)
T ss_dssp             ECSCCCGGGEEECTTSCCEEECCCTTCEEC------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHH
T ss_pred             eecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHH
Confidence            5999999999999887 69999999998765322111    233579999999999998889999999999999999999


Q ss_pred             CCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHH
Q 045790           81 GRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQ  160 (231)
Q Consensus        81 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  160 (231)
                      |+.||.......                                       +...+   .......        ...+..
T Consensus       252 G~~Pf~~~~~~~---------------------------------------~~~~i---~~~~~~~--------~~~~~~  281 (336)
T 4g3f_A          252 GCHPWTQYFRGP---------------------------------------LCLKI---ASEPPPI--------REIPPS  281 (336)
T ss_dssp             SSCSSTTTCCSC---------------------------------------CHHHH---HHSCCGG--------GGSCTT
T ss_pred             CcCCCCCCCHHH---------------------------------------HHHHH---HcCCCCc--------hhcCcc
Confidence            999997543211                                       11111   0000000        011112


Q ss_pred             HHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcc
Q 045790          161 QMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFE  193 (231)
Q Consensus       161 ~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~  193 (231)
                      ....+.+++.+||+.||++|||+.||+++|...
T Consensus       282 ~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~  314 (336)
T 4g3f_A          282 CAPLTAQAIQEGLRKEPVHRASAMELRRKVGKA  314 (336)
T ss_dssp             SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHH
Confidence            234567889999999999999999999998763

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.96  E-value=1.4e-29  Score=206.43  Aligned_cols=156  Identities=17%  Similarity=0.125  Sum_probs=101.6

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCC---ceeEeeccccccchhhhhhC------CCCCCcccHhHHHHHH
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGP---KTIMLVGTLAYMASEYISTG------RVSKELDVFSFRVVAL   76 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~---~~~~~~g~~~y~aPE~~~~~------~~~~~~Dv~s~G~vl~   76 (231)
                      .||||||+|||++.++.+||+|||+++........   .....+||+.|+|||++.+.      .++.++|||||||++|
T Consensus       130 iHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~  209 (303)
T 3hmm_A          130 AHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFW  209 (303)
T ss_dssp             ECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHH
T ss_pred             eeccCCcccEEECCCCCEEEEeCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHH
Confidence            49999999999999999999999999876533221   12346899999999998653      3567899999999999


Q ss_pred             HHHhCCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCc
Q 045790           77 EIATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSR  156 (231)
Q Consensus        77 el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  156 (231)
                      ||++|..||.......        .+..                 +  ............ ......    ..++.+...
T Consensus       210 El~tg~~~~~~~~~~~--------~p~~-----------------~--~~~~~~~~~~~~-~~~~~~----~~rp~~p~~  257 (303)
T 3hmm_A          210 EIARRCSIGGIHEDYQ--------LPYY-----------------D--LVPSDPSVEEMR-KVVCEQ----KLRPNIPNR  257 (303)
T ss_dssp             HHHHTBCBTTBCCCCC--------CTTT-----------------T--TSCSSCCHHHHH-HHHTTS----CCCCCCCGG
T ss_pred             HHHHCCCCCCcccccc--------ccch-----------------h--cccccchHHHHH-HHHhcc----cCCCCCCcc
Confidence            9999998875432100        0000                 0  000011111111 111111    112222221


Q ss_pred             c-cHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcc
Q 045790          157 F-DEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFE  193 (231)
Q Consensus       157 ~-~~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~  193 (231)
                      . ..+....+.+|+.+||+.||++||||.||++.|+..
T Consensus       258 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l  295 (303)
T 3hmm_A          258 WQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL  295 (303)
T ss_dssp             GGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHH
T ss_pred             ccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHH
Confidence            1 234567788999999999999999999999999763

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.96  E-value=1.1e-29  Score=206.40  Aligned_cols=135  Identities=19%  Similarity=0.140  Sum_probs=102.3

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+|||++.++.+||+|||+++...... ....+.+||+.|+|||++.+..++.++||||+||++|+|++|+.||
T Consensus       148 iHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~-~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF  226 (304)
T 3ubd_A          148 IYRDLKPENILLDEEGHIKLTDFGLSKESIDHE-KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF  226 (304)
T ss_dssp             CCSSCCGGGEEECTTSCEEEESSEEEEC------CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred             cCCCCCHHHeEEcCCCCEEecccccceeccCCC-ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCC
Confidence            599999999999999999999999998654321 2234568999999999999889999999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      ......+....+....                                                 ...    +......+
T Consensus       227 ~~~~~~~~~~~i~~~~-------------------------------------------------~~~----p~~~s~~~  253 (304)
T 3ubd_A          227 QGKDRKETMTMILKAK-------------------------------------------------LGM----PQFLSPEA  253 (304)
T ss_dssp             CCSSHHHHHHHHHHCC-------------------------------------------------CCC----CTTSCHHH
T ss_pred             CCcCHHHHHHHHHcCC-------------------------------------------------CCC----CCcCCHHH
Confidence            7655332222221100                                                 001    11112346


Q ss_pred             HHHHHhhcCCCCCCCCC-----HHHHHHHHhccc
Q 045790          166 LIVGLWCAHPDRCFRPS-----IRQAIQVLNFET  194 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps-----~~ell~~l~~~~  194 (231)
                      .+|+.+||+.||++|||     +.|+++|++|..
T Consensus       254 ~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~  287 (304)
T 3ubd_A          254 QSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFST  287 (304)
T ss_dssp             HHHHHHHTCSSGGGSTTCSTTTHHHHHTSGGGTT
T ss_pred             HHHHHHHcccCHHHCCCCCcCCHHHHHcCccccC
Confidence            78899999999999998     589999999865

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.96  E-value=6.6e-30  Score=207.88  Aligned_cols=137  Identities=14%  Similarity=0.150  Sum_probs=105.2

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCC-CCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHEL-GPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      .||||||+|||++.++.+||+|||+++.+.... .....+.+||+.|+|||++.+..++.++||||+||++|+|++|..|
T Consensus       154 iHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~P  233 (311)
T 4aw0_A          154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP  233 (311)
T ss_dssp             ECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCS
T ss_pred             ccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence            599999999999999999999999998775332 2334567899999999999998999999999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |...+.......+....                                                 ..+...+    ...
T Consensus       234 F~~~~~~~~~~~i~~~~-------------------------------------------------~~~p~~~----s~~  260 (311)
T 4aw0_A          234 FRAGNEGLIFAKIIKLE-------------------------------------------------YDFPEKF----FPK  260 (311)
T ss_dssp             SCCSSHHHHHHHHHHTC-------------------------------------------------CCCCTTC----CHH
T ss_pred             CCCCCHHHHHHHHHcCC-------------------------------------------------CCCCccc----CHH
Confidence            97654332222221100                                                 0111111    234


Q ss_pred             HHHHHHhhcCCCCCCCCCHHH------HHHHHhcccC
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQ------AIQVLNFETT  195 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~e------ll~~l~~~~~  195 (231)
                      +.+|+.+||+.||++|||+.|      |++|++|...
T Consensus       261 ~~dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~i  297 (311)
T 4aw0_A          261 ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV  297 (311)
T ss_dssp             HHHHHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTTC
T ss_pred             HHHHHHHHccCCHhHCcChHHHcCCHHHHCCCCcCCC
Confidence            577899999999999999987      5788888653

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.95  E-value=2.3e-28  Score=198.72  Aligned_cols=135  Identities=24%  Similarity=0.274  Sum_probs=91.1

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCC-----------ceeEeeccccccchhhhhhCCCCCCcccHhHHHH
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGP-----------KTIMLVGTLAYMASEYISTGRVSKELDVFSFRVV   74 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~-----------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~v   74 (231)
                      .||||||+|||++.++.+||+|||+++.+......           .....+||+.|||||++.+..++.++||||+||+
T Consensus       140 iHRDlKp~NILl~~~~~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvi  219 (299)
T 4g31_A          140 MHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLI  219 (299)
T ss_dssp             CCCCCCGGGEEECTTCCEEECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHH
T ss_pred             ccccCcHHHeEECCCCcEEEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHH
Confidence            49999999999999999999999999876532211           1234579999999999998889999999999999


Q ss_pred             HHHHHhCCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhccccc
Q 045790           75 ALEIATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLD  154 (231)
Q Consensus        75 l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  154 (231)
                      +|||++   ||......                                         ...+.... ....     +.  
T Consensus       220 lyell~---Pf~~~~~~-----------------------------------------~~~~~~~~-~~~~-----p~--  247 (299)
T 4g31_A          220 LFELLY---PFSTQMER-----------------------------------------VRTLTDVR-NLKF-----PP--  247 (299)
T ss_dssp             HHHHHS---CCSSHHHH-----------------------------------------HHHHHHHH-TTCC-----CH--
T ss_pred             HHHHcc---CCCCccHH-----------------------------------------HHHHHHHh-cCCC-----CC--
Confidence            999996   66532210                                         00000000 0000     00  


Q ss_pred             CcccHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          155 SRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       155 ~~~~~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                        ...........|+.+||+.||++|||+.|+++|.++..
T Consensus       248 --~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~  285 (299)
T 4g31_A          248 --LFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFED  285 (299)
T ss_dssp             --HHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGCC
T ss_pred             --CCcccCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCC
Confidence              01112234567899999999999999999999999864

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.95  E-value=2.1e-28  Score=206.09  Aligned_cols=168  Identities=16%  Similarity=0.093  Sum_probs=110.5

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCC---CCceeEeeccccccchhhhhhCC-CCCCcccHhHHHHHHHHHhC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHEL---GPKTIMLVGTLAYMASEYISTGR-VSKELDVFSFRVVALEIATG   81 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~~g~~~y~aPE~~~~~~-~~~~~Dv~s~G~vl~el~~g   81 (231)
                      .||||||+|||++.++.+||+|||+++.+....   .....+.+||+.|+|||++.+.. ++.++||||+||+++||++|
T Consensus       180 iHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G  259 (398)
T 4b99_A          180 IHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLAR  259 (398)
T ss_dssp             BCCCCCGGGEEECTTCCEEECCCTTCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHT
T ss_pred             cCCCcCccccccCCCCCEEEeecceeeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHC
Confidence            599999999999999999999999998764321   11234568999999999987754 68999999999999999999


Q ss_pred             CCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHH
Q 045790           82 RKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQ  161 (231)
Q Consensus        82 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  161 (231)
                      +.||.+....+.+..+...........+......               ............. .. .+ ..+....    
T Consensus       260 ~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~~~---------------~~~~~~~~~~~~~-~~-~~-~~~~~~~----  317 (398)
T 4b99_A          260 RQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAE---------------RVRAYIQSLPPRQ-PV-PW-ETVYPGA----  317 (398)
T ss_dssp             SCSSCCSSHHHHHHHHHHHHCCCCGGGTC--------------------CHHHHHHSSCCCC-CC-CH-HHHSTTC----
T ss_pred             CCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhh---------------hhhhhhhcCCCcC-CC-CH-HHhCCCC----
Confidence            9999887766666655543322222111110000               0000000000000 00 00 0000011    


Q ss_pred             HHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccC
Q 045790          162 MTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETT  195 (231)
Q Consensus       162 ~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~  195 (231)
                      ...+.+|+.+||+.||++|||+.|+++|+++...
T Consensus       318 s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~  351 (398)
T 4b99_A          318 DRQALSLLGRMLRFEPSARISAAAALRHPFLAKY  351 (398)
T ss_dssp             CHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGTTT
T ss_pred             CHHHHHHHHHHCcCChhHCcCHHHHhcCHhhCcC
Confidence            2346789999999999999999999999999753

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.94  E-value=6.5e-27  Score=192.03  Aligned_cols=157  Identities=29%  Similarity=0.469  Sum_probs=127.2

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCc
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      -.||||||+||+++.++.+||+|||++...............|+..|+|||++.+..++.++||||+|++++++++|..|
T Consensus       155 ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p  234 (326)
T 3uim_A          155 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRA  234 (326)
T ss_dssp             EECCCCSGGGEEECTTCCEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCS
T ss_pred             eEeCCCchhhEEECCCCCEEeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCc
Confidence            45999999999999999999999999987654333334445689999999999888899999999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |.......                                  ........|+.............+..+...........
T Consensus       235 f~~~~~~~----------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (326)
T 3uim_A          235 FDLARLAN----------------------------------DDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQ  280 (326)
T ss_dssp             BCHHHHTT----------------------------------TSCSBHHHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHH
T ss_pred             cccccccc----------------------------------ccchhHHHHHHHHhhchhhhhhcChhhccccCHHHHHH
Confidence            96433110                                  22234556666555555666667777777788888999


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhcccC
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNFETT  195 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~  195 (231)
                      +.+++.+||+.||++|||+.+|+++|+....
T Consensus       281 l~~li~~cl~~dP~~Rps~~ell~~L~~~~~  311 (326)
T 3uim_A          281 LIQVALLCTQSSPMERPKMSEVVRMLEGDGL  311 (326)
T ss_dssp             HHHHHHHHTCSCGGGSCCHHHHHHHHHTSSC
T ss_pred             HHHHHHHHhCcCCccCCCHHHHHHHhcCcch
Confidence            9999999999999999999999999987543

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.93  E-value=3.9e-27  Score=196.23  Aligned_cols=82  Identities=21%  Similarity=0.188  Sum_probs=66.3

Q ss_pred             eecCCCCCCeeeCCC-CcEEEeccccccccCCCCC---------------------------CceeEeeccccccchhhh
Q 045790            6 YSRSPELPPGRGDFN-FNAKLGDFGLARLMDHELG---------------------------PKTIMLVGTLAYMASEYI   57 (231)
Q Consensus         6 ~~rdlk~~nil~~~~-~~~kl~Dfg~~~~~~~~~~---------------------------~~~~~~~g~~~y~aPE~~   57 (231)
                      .||||||+|||++.+ +.+||+|||+++.......                           ......+||+.|+|||++
T Consensus       139 iHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l  218 (361)
T 4f9c_A          139 VHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVL  218 (361)
T ss_dssp             ECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHH
T ss_pred             EeCcCCHHHeEEeCCCCeEEECcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHH
Confidence            599999999999876 7899999999976543211                           012345799999999999


Q ss_pred             hhCC-CCCCcccHhHHHHHHHHHhCCCcccc
Q 045790           58 STGR-VSKELDVFSFRVVALEIATGRKVINR   87 (231)
Q Consensus        58 ~~~~-~~~~~Dv~s~G~vl~el~~g~~p~~~   87 (231)
                      .+.. ++.++||||+||++++|++|+.||..
T Consensus       219 ~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~  249 (361)
T 4f9c_A          219 TKCPNQTTAIDMWSAGVIFLSLLSGRYPFYK  249 (361)
T ss_dssp             TTCSCCCTHHHHHHHHHHHHHHHHTCSSSSC
T ss_pred             cCCCCCCCccchhhhHHHHHHHHHCCCCCCC
Confidence            7764 88999999999999999999999954

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.93  E-value=5.8e-26  Score=186.12  Aligned_cols=154  Identities=22%  Similarity=0.307  Sum_probs=121.4

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCC-CceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELG-PKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      .||||||+||+++.++.+||+|||+++....... .......|+..|+|||++.+..++.++||||+|++++++++|+.|
T Consensus       161 vH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p  240 (321)
T 2qkw_B          161 IHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSA  240 (321)
T ss_dssp             ECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTT
T ss_pred             ecCCCCHHHEEECCCCCEEEeecccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCc
Confidence            5999999999999999999999999976542211 122345688999999999888899999999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |.....                                    ........|.........+....++.+...........
T Consensus       241 ~~~~~~------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (321)
T 2qkw_B          241 IVQSLP------------------------------------REMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRK  284 (321)
T ss_dssp             CSCSSS------------------------------------SSCCCHHHHTHHHHTTTCCCSSSSSSCTTCSCHHHHHH
T ss_pred             ccccCc------------------------------------HHHHHHHHHhhhccccccHHHhcChhhccccCHHHHHH
Confidence            975431                                    11223445554444444555566666666677888899


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhcccC
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNFETT  195 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~  195 (231)
                      +.+++.+||+.||++|||+.+|+++|+....
T Consensus       285 l~~li~~~l~~dP~~Rps~~ell~~L~~~l~  315 (321)
T 2qkw_B          285 FGDTAVKCLALSSEDRPSMGDVLWKLEYALR  315 (321)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHcCCCcccCcCHHHHHHHHHHHhh
Confidence            9999999999999999999999999987543

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.92  E-value=7.1e-26  Score=199.04  Aligned_cols=140  Identities=16%  Similarity=0.006  Sum_probs=106.0

Q ss_pred             eecCCCCCCeeeCC--CCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCC
Q 045790            6 YSRSPELPPGRGDF--NFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~--~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~   83 (231)
                      .||||||+|||++.  .+.+||+|||+++.+...  ......+||+.|+|||++.+..|+.++||||+||++|+|++|..
T Consensus       277 iHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~--~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~  354 (573)
T 3uto_A          277 VHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK--QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLS  354 (573)
T ss_dssp             ECCCCCGGGEEESSSSCCCEEECCCSSCEECCTT--SEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCC
T ss_pred             eeccCChhhccccCCCCCCEEEeeccceeEccCC--CceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCC
Confidence            49999999999985  478999999999887532  33456789999999999998889999999999999999999999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||...........+.......                                             ........    ..
T Consensus       355 Pf~~~~~~~~~~~i~~~~~~~---------------------------------------------~~~~~~~~----s~  385 (573)
T 3uto_A          355 PFGGENDDETLRNVKSCDWNM---------------------------------------------DDSAFSGI----SE  385 (573)
T ss_dssp             SSCCSSHHHHHHHHHTTCCCC---------------------------------------------CSGGGTTS----CH
T ss_pred             CCCCcCHHHHHHHHHhCCCCC---------------------------------------------CcccccCC----CH
Confidence            998665433322222111000                                             00000111    23


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                      .+.+|+.+||+.||++|||+.|+++|+|+....
T Consensus       386 ~~~dli~~~L~~dp~~R~t~~e~l~Hpw~~~~~  418 (573)
T 3uto_A          386 DGKDFIRKLLLADPNTRMTIHQALEHPWLTPGN  418 (573)
T ss_dssp             HHHHHHHTTSCSSGGGSCCHHHHHHSTTTSCCC
T ss_pred             HHHHHHHHHccCChhHCcCHHHHhcCcCcCCCC
Confidence            456789999999999999999999999987543

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.92  E-value=3.8e-26  Score=201.56  Aligned_cols=136  Identities=17%  Similarity=0.070  Sum_probs=102.2

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhh-CCCCCCcccHhHHHHHHHHHhCCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIST-GRVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      .||||||+|||++.+|.+||+|||+|+.+....   ..+.+||+.|+|||++.. ..|+.++|+||+||++|+|++|..|
T Consensus       314 iHRDLKPeNILld~~G~vKL~DFGlA~~~~~~~---~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~P  390 (689)
T 3v5w_A          314 VYRDLKPANILLDEHGHVRISDLGLACDFSKKK---PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP  390 (689)
T ss_dssp             ECCCCSGGGEEECTTSCEEECCCTTCEECSSCC---CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCT
T ss_pred             cccCCchHHeEEeCCCCEEecccceeeecCCCC---CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence            599999999999999999999999998765432   345689999999999964 5689999999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |......                                       ............       ...+..    .....
T Consensus       391 F~~~~~~---------------------------------------~~~~i~~~i~~~-------~~~~p~----~~S~~  420 (689)
T 3v5w_A          391 FRQHKTK---------------------------------------DKHEIDRMTLTM-------AVELPD----SFSPE  420 (689)
T ss_dssp             TCGGGCC---------------------------------------CHHHHHHHHHHC-------CCCCCT----TSCHH
T ss_pred             CCCCChH---------------------------------------HHHHHHHhhcCC-------CCCCCc----cCCHH
Confidence            9754311                                       111111111100       011111    12234


Q ss_pred             HHHHHHhhcCCCCCCCCC-----HHHHHHHHhccc
Q 045790          165 LLIVGLWCAHPDRCFRPS-----IRQAIQVLNFET  194 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps-----~~ell~~l~~~~  194 (231)
                      +.+|+.+||+.||.+|++     +.||++|++|..
T Consensus       421 a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~  455 (689)
T 3v5w_A          421 LRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRS  455 (689)
T ss_dssp             HHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGGTT
T ss_pred             HHHHHHHHccCCHhHCCCCCCCCHHHHhcCccccC
Confidence            678899999999999998     899999999964

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.91  E-value=2.5e-25  Score=191.26  Aligned_cols=171  Identities=16%  Similarity=0.046  Sum_probs=109.0

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+|||++.++.+||+|||+++.....  ......+|++.|+|||++.+..++.++||||+||++++|++|+.||
T Consensus       186 iHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF  263 (464)
T 3ttj_A          186 IHRDLKPSNIVVKSDCTLKILDFGLARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF  263 (464)
T ss_dssp             CCCCCCGGGEEECTTSCEEECCCCCC-----C--CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSS
T ss_pred             ccCCCChHhEEEeCCCCEEEEEEEeeeecCCC--cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCC
Confidence            59999999999999999999999999876432  2234568899999999999888999999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhh--cchhhhhhcccccC---cccHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYG--ERKLLSAANERLDS---RFDEQ  160 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~---~~~~~  160 (231)
                      .+....+....+...........+...                ......++.....  .......+...+..   .....
T Consensus       264 ~g~~~~~~~~~i~~~lg~p~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  327 (464)
T 3ttj_A          264 PGRDYIDQWNKVIEQLGTPCPEFMKKL----------------QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKL  327 (464)
T ss_dssp             CCSSHHHHHHHHHHHHCSCCHHHHTTS----------------CHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHH
T ss_pred             CCCCHHHHHHHHHHhcCCCCHHHHHHc----------------chhhhhHhhcccccCCCChHHhCcccccccccccccc
Confidence            887665555555432222221111110                0001111100000  00001111111111   11112


Q ss_pred             HHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          161 QMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       161 ~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      ....+.+|+.+||+.||++|||+.|+++|+++..
T Consensus       328 ~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~~~~  361 (464)
T 3ttj_A          328 KASQARDLLSKMLVIDPAKRISVDDALQHPYINV  361 (464)
T ss_dssp             HHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGG
T ss_pred             cCHHHHHHHHHHcCCChhhCCCHHHHhcChhhhh
Confidence            3556889999999999999999999999999964

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.91  E-value=4.7e-25  Score=179.06  Aligned_cols=143  Identities=19%  Similarity=0.175  Sum_probs=106.2

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCc
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      -.||||||+||+++.++.+||+|||++........ ......|+..|+|||++.+..++.++||||+|++++++++|..|
T Consensus       137 i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~p  215 (297)
T 3fxz_A          137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP  215 (297)
T ss_dssp             EECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC-CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCT
T ss_pred             ceeCCCCHHHEEECCCCCEEEeeCCCceecCCccc-ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence            35999999999999999999999999877653322 23445789999999999888899999999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |..........                                          .......      +.+  ..+......
T Consensus       216 f~~~~~~~~~~------------------------------------------~~~~~~~------~~~--~~~~~~~~~  245 (297)
T 3fxz_A          216 YLNENPLRALY------------------------------------------LIATNGT------PEL--QNPEKLSAI  245 (297)
T ss_dssp             TTTSCHHHHHH------------------------------------------HHHHHCS------CCC--SCGGGSCHH
T ss_pred             CCCCCHHHHHH------------------------------------------HHHhCCC------CCC--CCccccCHH
Confidence            96543211000                                          0000000      000  011122345


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhcccCCCC
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNFETTMPN  198 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~~~  198 (231)
                      +.+++.+||+.||++|||+.|+++|+++....+.
T Consensus       246 ~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~~  279 (297)
T 3fxz_A          246 FRDFLNRCLEMDVEKRGSAKELLQHQFLKIAKPL  279 (297)
T ss_dssp             HHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCCCG
T ss_pred             HHHHHHHHccCChhHCcCHHHHhhChhhcccCcc
Confidence            6789999999999999999999999999876543

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.91  E-value=1.4e-24  Score=182.23  Aligned_cols=182  Identities=13%  Similarity=0.012  Sum_probs=113.1

Q ss_pred             eecCCCCCCeeeC--CCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCC
Q 045790            6 YSRSPELPPGRGD--FNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~--~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~   83 (231)
                      .||||||+|||++  .++.+||+|||+++.....    .....|+..|+|||++.+..++.++||||+||++++|++|..
T Consensus       181 vHrDlkp~NIll~~~~~~~~kL~DFG~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~  256 (382)
T 2vx3_A          181 IHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQR----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEP  256 (382)
T ss_dssp             ECCCCSGGGEEESSTTSCCEEECCCTTCEETTCC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred             EcCCCCcccEEEecCCCCcEEEEeccCceecccc----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCC
Confidence            5999999999994  5788999999999876432    233578899999999988889999999999999999999999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccc-------cccchhhc-----cCC---CCCCCchhHHHHHHHhhcchhhhh
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLG-------VEGEKAVL-----GGS---SKNYCPKLVAWVWDLYGERKLLSA  148 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~-----~~~---~~~~~~~~~~~~~~~~~~~~~~~~  148 (231)
                      ||...........+................       ......+.     .+.   .......+...+    ........
T Consensus       257 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----~~~~~~~~  332 (382)
T 2vx3_A          257 LFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNIL----GVETGGPG  332 (382)
T ss_dssp             SSCCSSHHHHHHHHHHHHCSCCHHHHTTCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHH----TTTTTSGG
T ss_pred             CCCCCCHHHHHHHHHHHhCCCCHHHHHhhHHHHHHHHhccccccccccccccccccCCcchhhHHHHh----hccccCCC
Confidence            998776555554444322111111100000       00000000     000   000001111111    00000000


Q ss_pred             hcccccCcccHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccC
Q 045790          149 ANERLDSRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETT  195 (231)
Q Consensus       149 ~~~~l~~~~~~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~  195 (231)
                      ............+...+.+|+.+||+.||++|||+.|+++|+++...
T Consensus       333 ~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~Rpta~e~L~hp~f~~~  379 (382)
T 2vx3_A          333 GRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKKT  379 (382)
T ss_dssp             GTTTTCTTCCHHHHHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGCC-
T ss_pred             ccccccccccchhhHHHHHHHHHhcCCChhhCCCHHHHhcCcccccC
Confidence            00011112334566788999999999999999999999999998764

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.91  E-value=3.9e-25  Score=180.67  Aligned_cols=168  Identities=19%  Similarity=0.124  Sum_probs=106.8

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhh-CCCCCCcccHhHHHHHHHHHhCCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIST-GRVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      .||||||+|||++.++.+||+|||+++...... .......|+..|+|||++.+ ..++.++||||+|++++++++|..|
T Consensus       141 vH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p  219 (311)
T 3niz_A          141 LHRDLKPQNLLINSDGALKLADFGLARAFGIPV-RSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPL  219 (311)
T ss_dssp             ECCCCCGGGEEECTTCCEEECCCTTCEETTSCC-C---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             ccCCCchHhEEECCCCCEEEccCcCceecCCCc-ccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCC
Confidence            599999999999999999999999998764322 22234567999999999876 4589999999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |......+....+...........+...                 ..+..|..     ... ..................
T Consensus       220 f~~~~~~~~~~~i~~~~~~~~~~~~~~~-----------------~~~~~~~~-----~~~-~~~~~~~~~~~~~~~~~~  276 (311)
T 3niz_A          220 FPGVTDDDQLPKIFSILGTPNPREWPQV-----------------QELPLWKQ-----RTF-QVFEKKPWSSIIPGFCQE  276 (311)
T ss_dssp             CCCSSTTTHHHHHHHHHCCCCTTTSGGG-----------------TTSHHHHS-----CCC-CCCCCCCHHHHSTTCCHH
T ss_pred             CCCCChHHHHHHHHHHHCCCChHHhhhh-----------------hccchhhh-----ccc-ccccCCcHHHhCcccCHH
Confidence            9765544333333221111111000000                 00001100     000 000000000000011235


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhcccCCC
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNFETTMP  197 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~~  197 (231)
                      +.+|+.+||+.||++|||+.|+++|+++....+
T Consensus       277 ~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~  309 (311)
T 3niz_A          277 GIDLLSNMLCFDPNKRISARDAMNHPYFKDLDP  309 (311)
T ss_dssp             HHHHHHHHSCSCTTTSCCHHHHHTSGGGTTSCT
T ss_pred             HHHHHHHHcCCChhHCCCHHHHhcCcccccCCc
Confidence            678999999999999999999999999976543

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.91  E-value=9.4e-25  Score=177.87  Aligned_cols=162  Identities=15%  Similarity=0.014  Sum_probs=107.4

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+||+++.++.+||+|||+++......  ......|+..|+|||++.+..++.++||||+||++++|++|..||
T Consensus       142 vH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf  219 (308)
T 3g33_A          142 VHRDLKPENILVTSGGTVKLADFGLARIYSYQM--ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLF  219 (308)
T ss_dssp             CCSCCCTTTEEECTTSCEEECSCSCTTTSTTCC--CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSC
T ss_pred             ccCCCCHHHEEEcCCCCEEEeeCccccccCCCc--ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCC
Confidence            599999999999999999999999997654322  223457899999999998888999999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      ...........+...........+..........+..    ...              .......    .    .....+
T Consensus       220 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~----~~~--------------~~~~~~~----~----~~~~~~  273 (308)
T 3g33_A          220 CGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPP----RGP--------------RPVQSVV----P----EMEESG  273 (308)
T ss_dssp             CCSSHHHHHHHHHHHHCCCCTTTSCSSCSSCGGGSCC----CCC--------------CCHHHHS----C----SCCHHH
T ss_pred             CCCCHHHHHHHHHHHhCCCChhhccchhhccccccCC----CCC--------------CcHHHhC----c----cccHHH
Confidence            8766554444443221111111110000000000000    000              0000000    1    112456


Q ss_pred             HHHHHhhcCCCCCCCCCHHHHHHHHhcccC
Q 045790          166 LIVGLWCAHPDRCFRPSIRQAIQVLNFETT  195 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps~~ell~~l~~~~~  195 (231)
                      .+++.+||+.||++|||+.|+++|+++...
T Consensus       274 ~~li~~~L~~dP~~R~t~~e~l~h~~~~~~  303 (308)
T 3g33_A          274 AQLLLEMLTFNPHKRISAFRALQHSYLHKD  303 (308)
T ss_dssp             HHHHHHHTCSSTTTSCCHHHHHTSTTC---
T ss_pred             HHHHHHHhcCCCccCCCHHHHhcCccccCC
Confidence            789999999999999999999999998764

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.91  E-value=2.3e-25  Score=189.75  Aligned_cols=190  Identities=12%  Similarity=0.048  Sum_probs=108.1

Q ss_pred             eecCCCCCCeeeCCCCc--EEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCC
Q 045790            6 YSRSPELPPGRGDFNFN--AKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~--~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~   83 (231)
                      .||||||+|||++.++.  +||+|||++......    .....|+..|+|||++.+..++.++||||+||++++|++|..
T Consensus       222 vHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~  297 (429)
T 3kvw_A          222 IHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQR----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYP  297 (429)
T ss_dssp             ECSCCSGGGEEESSTTSCCEEECCCTTCEETTCC----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred             ecCCCCHHHeEEccCCCcceEEeecccceecCCc----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCC
Confidence            59999999999998887  999999999765422    233578899999999988889999999999999999999999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHH-HHH-hhc--chhhhhhcccccC----
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWV-WDL-YGE--RKLLSAANERLDS----  155 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~--~~~~~~~~~~l~~----  155 (231)
                      ||......+....+.................  ...+................ ... ...  ........+....    
T Consensus       298 pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  375 (429)
T 3kvw_A          298 LLPGEDEGDQLACMIELLGMPSQKLLDASKR--AKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGN  375 (429)
T ss_dssp             SSCCSSHHHHHHHHHHHHCCCCHHHHHTBTT--HHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHH
T ss_pred             CCCCCCHHHHHHHHHHHcCCCCHHHHHhhhh--hhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHh
Confidence            9988766555444443222111111000000  00000000000000000000 000 000  0000000000000    


Q ss_pred             cccHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCCCCCCC
Q 045790          156 RFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTMPNLPS  201 (231)
Q Consensus       156 ~~~~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~~~~~~  201 (231)
                      .........+.+|+.+||++||++|||+.|+++|+++....+.++.
T Consensus       376 ~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~Hpw~~~~~~~~~~  421 (429)
T 3kvw_A          376 ALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRRRLPKPPT  421 (429)
T ss_dssp             HTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTTC--------
T ss_pred             hccccchHHHHHHHHHHCCCChhhCCCHHHHhCChhhccCCCCCCc
Confidence            0000113457899999999999999999999999999887655544

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.91  E-value=5.2e-25  Score=185.11  Aligned_cols=176  Identities=17%  Similarity=0.099  Sum_probs=108.0

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCC--------------------CCceeEeeccccccchhhhhh-CCCCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHEL--------------------GPKTIMLVGTLAYMASEYIST-GRVSK   64 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~--------------------~~~~~~~~g~~~y~aPE~~~~-~~~~~   64 (231)
                      .||||||+|||++.++.+||+|||+++......                    .......+||..|+|||++.+ ..++.
T Consensus       131 vHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  210 (388)
T 3oz6_A          131 LHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTK  210 (388)
T ss_dssp             ECCCCCGGGEEECTTCCEEECCCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCT
T ss_pred             EeCCCCHHHeEEcCCCCEEecCCcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCC
Confidence            599999999999999999999999997653210                    111234578999999999976 56899


Q ss_pred             CcccHhHHHHHHHHHhCCCccccchhhhhhhhccccCCCCCCccccccccccchhh-------ccCCCCCCCchhHHHHH
Q 045790           65 ELDVFSFRVVALEIATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAV-------LGGSSKNYCPKLVAWVW  137 (231)
Q Consensus        65 ~~Dv~s~G~vl~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~  137 (231)
                      ++||||+||++++|++|+.||...........+......+....+.....+.....       ...........+..|..
T Consensus       211 ~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (388)
T 3oz6_A          211 GIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKN  290 (388)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHH
T ss_pred             hhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhh
Confidence            99999999999999999999988776555555543222211111110000000000       00000000000111100


Q ss_pred             HHhhcchhhhhhcccccCcccHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          138 DLYGERKLLSAANERLDSRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       138 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      ...       ...+.  .    .....+.+|+.+||+.||++|||+.|+++|+++..
T Consensus       291 ~~~-------~~~~~--~----~~~~~~~dll~~~L~~dP~~R~t~~e~l~Hp~~~~  334 (388)
T 3oz6_A          291 LLL-------KINPK--A----DCNEEALDLLDKLLQFNPNKRISANDALKHPFVSI  334 (388)
T ss_dssp             HHH-------HHCTT--C----CCCHHHHHHHHHHCCSSGGGSCCHHHHTTSTTTTT
T ss_pred             hcc-------ccccc--c----cCCHHHHHHHHHhhccCcccCCCHHHHhCCHHHHH
Confidence            000       00000  0    11245788999999999999999999999999854

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.90  E-value=1.2e-24  Score=177.77  Aligned_cols=139  Identities=20%  Similarity=0.193  Sum_probs=94.4

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCc
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      -.||||||+||+++.++.+||+|||+++..... ........|+..|+|||++.+..++.++||||+|+++|++++|..|
T Consensus       160 ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~P  238 (309)
T 3p86_A          160 IVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAST-FLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQP  238 (309)
T ss_dssp             CCCTTCCGGGEEECTTCCEEECCCC------------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCT
T ss_pred             EECCCCChhhEEEeCCCcEEECCCCCCcccccc-ccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence            469999999999999999999999999764422 1223446789999999999888899999999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |...........+.                                       .            .......+......
T Consensus       239 f~~~~~~~~~~~~~---------------------------------------~------------~~~~~~~~~~~~~~  267 (309)
T 3p86_A          239 WGNLNPAQVVAAVG---------------------------------------F------------KCKRLEIPRNLNPQ  267 (309)
T ss_dssp             TTTSCHHHHHHHHH---------------------------------------H------------SCCCCCCCTTSCHH
T ss_pred             CCCCCHHHHHHHHH---------------------------------------h------------cCCCCCCCccCCHH
Confidence            97544221111000                                       0            00000111122245


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhcccC
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNFETT  195 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~  195 (231)
                      +.+++.+||+.||++|||+.+|++.|.....
T Consensus       268 l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~  298 (309)
T 3p86_A          268 VAAIIEGCWTNEPWKRPSFATIMDLLRPLIK  298 (309)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC
T ss_pred             HHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence            6789999999999999999999999887443

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.90  E-value=1.2e-24  Score=178.78  Aligned_cols=138  Identities=17%  Similarity=0.157  Sum_probs=99.7

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCC-ceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGP-KTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~   83 (231)
                      .||||||+|||++.++.+||+|||+++........ ......++..|+|||++.+..++.++||||+|+++|++++ |..
T Consensus       137 vH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~  216 (325)
T 3kex_A          137 VHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAE  216 (325)
T ss_dssp             CCSCCSSTTEEESSSSCEEECSCSGGGGSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred             CCCccchheEEECCCCeEEECCCCcccccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCC
Confidence            59999999999999999999999999876543222 2344567789999999998889999999999999999999 999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||......                                       .+...+..    .         .....+.....
T Consensus       217 p~~~~~~~---------------------------------------~~~~~~~~----~---------~~~~~~~~~~~  244 (325)
T 3kex_A          217 PYAGLRLA---------------------------------------EVPDLLEK----G---------ERLAQPQICTI  244 (325)
T ss_dssp             TTTTSCTT---------------------------------------HHHHHHHT----T---------CBCCCCTTBCT
T ss_pred             CccccCHH---------------------------------------HHHHHHHc----C---------CCCCCCCcCcH
Confidence            99753321                                       11111110    0         00000011122


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhcccC
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNFETT  195 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~  195 (231)
                      .+..++.+||+.||++|||+.+++++|.....
T Consensus       245 ~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~  276 (325)
T 3kex_A          245 DVYMVMVKCWMIDENIRPTFKELANEFTRMAR  276 (325)
T ss_dssp             TTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence            35678999999999999999999999987543

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.90  E-value=2.3e-24  Score=176.99  Aligned_cols=172  Identities=15%  Similarity=-0.003  Sum_probs=106.7

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhh-CCCCCCcccHhHHHHHHHHHhCCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIST-GRVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      .||||||+||+++.++.+||+|||++....... .......|+..|+|||++.+ ..++.++||||+|+++++|++|..|
T Consensus       122 vH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~p  200 (324)
T 3mtl_A          122 LHRDLKPQNLLINERGELKLADFGLARAKSIPT-KTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPL  200 (324)
T ss_dssp             EESSCCGGGEEECTTCCEEECSSSEEECC-------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             cCCCcCHHHEEECCCCCEEEccCcccccccCCc-cccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence            599999999999999999999999987654221 12234577999999999876 4589999999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |......+....+...........+.....                 ...+..............  ....    .....
T Consensus       201 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~--~~~~----~~~~~  257 (324)
T 3mtl_A          201 FPGSTVEEQLHFIFRILGTPTEETWPGILS-----------------NEEFKTYNYPKYRAEALL--SHAP----RLDSD  257 (324)
T ss_dssp             CCCSSHHHHHHHHHHHHCCCCTTTSTTGGG-----------------CHHHHHTCCCCCCCCCHH--HHCT----TSCHH
T ss_pred             CCCCCHHHHHHHHHHHhCCCChHhchhhhc-----------------chhhcccccccccchhhh--hhcC----CCCHH
Confidence            988766555444443222221111100000                 000000000000000000  0000    11234


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhcccCCCCCCC
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNFETTMPNLPS  201 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~~~~~~  201 (231)
                      +.+|+.+||+.||++|||+.|+++|+++.........
T Consensus       258 ~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~~~~  294 (324)
T 3mtl_A          258 GADLLTKLLQFEGRNRISAEDAMKHPFFLSLGERIHK  294 (324)
T ss_dssp             HHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCSTTSS
T ss_pred             HHHHHHHHcCcCcccCCCHHHHhcChhhhhccccccc
Confidence            6789999999999999999999999999776544333

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.90  E-value=7.9e-25  Score=179.99  Aligned_cols=138  Identities=20%  Similarity=0.145  Sum_probs=101.1

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCc-eeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPK-TIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~   83 (231)
                      .||||||+|||++.++.+||+|||+++......... .....++..|+|||++.+..++.++||||+|+++|++++ |..
T Consensus       139 vH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~  218 (327)
T 3poz_A          139 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK  218 (327)
T ss_dssp             CCSCCCGGGEEEEETTEEEECCTTHHHHHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred             eCCCCChheEEECCCCCEEEccCcceeEccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCC
Confidence            599999999999999999999999998765432221 233456778999999999899999999999999999999 999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||......                                       .+...+.             .......+.....
T Consensus       219 p~~~~~~~---------------------------------------~~~~~~~-------------~~~~~~~~~~~~~  246 (327)
T 3poz_A          219 PYDGIPAS---------------------------------------EISSILE-------------KGERLPQPPICTI  246 (327)
T ss_dssp             TTTTCCGG---------------------------------------GHHHHHH-------------TTCCCCCCTTBCH
T ss_pred             CccCCCHH---------------------------------------HHHHHHH-------------cCCCCCCCccCCH
Confidence            99754321                                       1111110             0111111122234


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhcccC
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNFETT  195 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~  195 (231)
                      .+..++.+||+.||++|||+.+|+++|.....
T Consensus       247 ~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~  278 (327)
T 3poz_A          247 DVYMIMVKCWMIDADSRPKFRELIIEFSKMAR  278 (327)
T ss_dssp             HHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence            57889999999999999999999999987543

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.90  E-value=2e-24  Score=174.99  Aligned_cols=145  Identities=18%  Similarity=0.162  Sum_probs=99.0

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCc---eeEeeccccccchhhhhhC------CCCCCcccHhHHHHHH
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPK---TIMLVGTLAYMASEYISTG------RVSKELDVFSFRVVAL   76 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~---~~~~~g~~~y~aPE~~~~~------~~~~~~Dv~s~G~vl~   76 (231)
                      .||||||+|||++.++.+||+|||+++.........   .....|+..|+|||++.+.      .++.++||||+|+++|
T Consensus       135 vH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~  214 (301)
T 3q4u_A          135 AHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLW  214 (301)
T ss_dssp             ECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHH
T ss_pred             ecCCCChHhEEEcCCCCEEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHH
Confidence            499999999999999999999999997654332211   1234789999999999765      3346899999999999


Q ss_pred             HHHhC----------CCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhh
Q 045790           77 EIATG----------RKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLL  146 (231)
Q Consensus        77 el~~g----------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (231)
                      ++++|          ..||.....                                     ........ ........  
T Consensus       215 el~tg~~~~~~~~~~~~pf~~~~~-------------------------------------~~~~~~~~-~~~~~~~~--  254 (301)
T 3q4u_A          215 EVARRMVSNGIVEDYKPPFYDVVP-------------------------------------NDPSFEDM-RKVVCVDQ--  254 (301)
T ss_dssp             HHHTTBCBTTBCCCCCCTTTTTSC-------------------------------------SSCCHHHH-HHHHTTSC--
T ss_pred             HHHhhhcCccccccccccccccCC-------------------------------------CCcchhhh-hHHHhccC--
Confidence            99999          555543210                                     01111111 11110000  


Q ss_pred             hhhcccccC-cccHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          147 SAANERLDS-RFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       147 ~~~~~~l~~-~~~~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                        ..+.... .........+.+++.+||+.||++|||+.+|++.|..
T Consensus       255 --~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~  299 (301)
T 3q4u_A          255 --QRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTK  299 (301)
T ss_dssp             --CCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHH
T ss_pred             --CCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhc
Confidence              0111111 1223456778999999999999999999999999875

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.90  E-value=1.9e-24  Score=177.98  Aligned_cols=136  Identities=18%  Similarity=0.153  Sum_probs=102.9

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCC-CCcccHhHHHHHHHHHhCCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVS-KELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~-~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      .||||||+||+++.++.+||+|||++......  ......+|++.|+|||++.+..+. .++||||+||++++|++|..|
T Consensus       136 vHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~p  213 (328)
T 3fe3_A          136 VHRDLKAENLLLDADMNIKIADFGFSNEFTVG--GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP  213 (328)
T ss_dssp             CCSCCCGGGEEECTTSCEEECSTTCCGGGSSS--CGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCS
T ss_pred             eccCCCHHHEEEcCCCCEEEeeccCceecCCC--CccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCC
Confidence            59999999999999999999999999766432  223345789999999999887764 789999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |...........+                                          ....       ..    .+......
T Consensus       214 f~~~~~~~~~~~i------------------------------------------~~~~-------~~----~p~~~s~~  240 (328)
T 3fe3_A          214 FDGQNLKELRERV------------------------------------------LRGK-------YR----IPFYMSTD  240 (328)
T ss_dssp             SCCSSHHHHHHHH------------------------------------------HHCC-------CC----CCTTSCHH
T ss_pred             CCCCCHHHHHHHH------------------------------------------HhCC-------CC----CCCCCCHH
Confidence            9764432111111                                          1000       00    11112234


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                      +.+++.+||+.||.+|||+.|+++|+++....
T Consensus       241 ~~~li~~~L~~dP~~R~t~~eil~h~~~~~~~  272 (328)
T 3fe3_A          241 CENLLKRFLVLNPIKRGTLEQIMKDRWINAGH  272 (328)
T ss_dssp             HHHHHHHHCCSSTTTSCCHHHHTTCTTTTTTC
T ss_pred             HHHHHHHHCCCChhHCcCHHHHhcCHhhcCCC
Confidence            67899999999999999999999999997654

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.90  E-value=8.4e-25  Score=178.65  Aligned_cols=133  Identities=19%  Similarity=0.151  Sum_probs=96.6

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCc
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      -.||||||+|||++.++.+||+|||++......  .......|+..|+|||++.+ .++.++||||+|++++++++|..+
T Consensus       178 ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~  254 (311)
T 3p1a_A          178 LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTA--GAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMEL  254 (311)
T ss_dssp             EECCCCSGGGEEECGGGCEEECCCTTCEECC--------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCC
T ss_pred             EecCCCCHHHEEECCCCCEEEccceeeeecccC--CCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCC
Confidence            369999999999999999999999998776432  22234568999999999865 789999999999999999999776


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      +.......                                              .......    .+.+..    .....
T Consensus       255 ~~~~~~~~----------------------------------------------~~~~~~~----~~~~~~----~~~~~  280 (311)
T 3p1a_A          255 PHGGEGWQ----------------------------------------------QLRQGYL----PPEFTA----GLSSE  280 (311)
T ss_dssp             CSSHHHHH----------------------------------------------HHTTTCC----CHHHHT----TSCHH
T ss_pred             CCCccHHH----------------------------------------------HHhccCC----Cccccc----CCCHH
Confidence            64322110                                              0000000    000001    11345


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      +.+++.+||+.||++|||+.||++|+++..
T Consensus       281 l~~li~~~L~~dP~~Rpt~~ell~hp~~~~  310 (311)
T 3p1a_A          281 LRSVLVMMLEPDPKLRATAEALLALPVLRQ  310 (311)
T ss_dssp             HHHHHHHHSCSSTTTSCCHHHHHTSGGGSC
T ss_pred             HHHHHHHHcCCChhhCcCHHHHHhCccccC
Confidence            788999999999999999999999999865

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.90  E-value=8.6e-25  Score=180.92  Aligned_cols=140  Identities=19%  Similarity=0.171  Sum_probs=96.3

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCC-ceeEeeccccccchhhhhh-----------CCCCCCcccHhHHH
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGP-KTIMLVGTLAYMASEYIST-----------GRVSKELDVFSFRV   73 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~-----------~~~~~~~Dv~s~G~   73 (231)
                      .||||||+|||++ ++.+||+|||+++........ ......|++.|+|||++.+           ..++.++||||+|+
T Consensus       130 iHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~  208 (343)
T 3dbq_A          130 VHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGC  208 (343)
T ss_dssp             CCCCCCGGGEEEE-TTEEEECCCSSSCCC------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHH
T ss_pred             ecCCCCcceEEEE-CCcEEEeecccccccCcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHH
Confidence            5999999999997 578999999999876533221 2335679999999999865           56788999999999


Q ss_pred             HHHHHHhCCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccc
Q 045790           74 VALEIATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERL  153 (231)
Q Consensus        74 vl~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  153 (231)
                      ++++|++|..||.....                                        .... .         ....++..
T Consensus       209 il~ell~g~~pf~~~~~----------------------------------------~~~~-~---------~~~~~~~~  238 (343)
T 3dbq_A          209 ILYYMTYGKTPFQQIIN----------------------------------------QISK-L---------HAIIDPNH  238 (343)
T ss_dssp             HHHHHHHSSCTTTTCCS----------------------------------------HHHH-H---------HHHHCTTS
T ss_pred             HHHHHHhCCCcchhhhh----------------------------------------HHHH-H---------HHHhcCCc
Confidence            99999999999964221                                        0000 0         01111111


Q ss_pred             cCcccHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          154 DSRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       154 ~~~~~~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                      ...++......+.+++..||+.||++|||+.|+++|+++....
T Consensus       239 ~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~~  281 (343)
T 3dbq_A          239 EIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT  281 (343)
T ss_dssp             CCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSCC
T ss_pred             ccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCccccccC
Confidence            1111212224567899999999999999999999999996544

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.90  E-value=2e-24  Score=179.63  Aligned_cols=172  Identities=14%  Similarity=0.026  Sum_probs=105.4

Q ss_pred             eecCCCCCCeeeCC-------------------------CCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhC
Q 045790            6 YSRSPELPPGRGDF-------------------------NFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTG   60 (231)
Q Consensus         6 ~~rdlk~~nil~~~-------------------------~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~   60 (231)
                      .||||||+|||++.                         ++.+||+|||++......    .....|+..|+|||++.+.
T Consensus       159 vHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~----~~~~~gt~~y~aPE~~~~~  234 (360)
T 3llt_A          159 THTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY----HGSIINTRQYRAPEVILNL  234 (360)
T ss_dssp             ECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC----CCSCCSCGGGCCHHHHTTC
T ss_pred             eeCCCCcccEEEccccccccccchhcccccccccccccCCCCEEEEeccCceecCCC----CcCccCcccccCcHHHcCC
Confidence            59999999999975                         788999999999765432    2345789999999999888


Q ss_pred             CCCCCcccHhHHHHHHHHHhCCCccccchhhhhhhhccccCCCCCCccccccccccchhhc-cCC----CCCCCchhHHH
Q 045790           61 RVSKELDVFSFRVVALEIATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVL-GGS----SKNYCPKLVAW  135 (231)
Q Consensus        61 ~~~~~~Dv~s~G~vl~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~  135 (231)
                      .++.++||||+||++++|++|+.||...........+.......+................ ...    .......... 
T Consensus       235 ~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-  313 (360)
T 3llt_A          235 GWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINS-  313 (360)
T ss_dssp             CCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHH-
T ss_pred             CCCCccchHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhh-
Confidence            8999999999999999999999999876544433333221111111000000000000000 000    0000000000 


Q ss_pred             HHHHhhcchhhhhhcccccCcccHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcc
Q 045790          136 VWDLYGERKLLSAANERLDSRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFE  193 (231)
Q Consensus       136 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~  193 (231)
                      ....          ... ...........+.+|+.+||+.||++|||+.||++|+++.
T Consensus       314 ~~~~----------~~~-~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~hp~f~  360 (360)
T 3llt_A          314 IKHV----------KKC-LPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKHKFLE  360 (360)
T ss_dssp             HHHH----------HTC-CCHHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred             hhhh----------hhc-ccccccchHHHHHHHHHHHhcCChhhCCCHHHHhcCcccC
Confidence            0000          000 0000111124677999999999999999999999999873

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.90  E-value=1.9e-24  Score=174.73  Aligned_cols=167  Identities=16%  Similarity=0.039  Sum_probs=104.5

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCC-CCCCcccHhHHHHHHHHHhCCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGR-VSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~-~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      .||||||+||+++.++.+||+|||++....... .......|+..|+|||++.+.. ++.++||||+|++++++++|..|
T Consensus       123 vH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p  201 (292)
T 3o0g_A          123 LHRDLKPQNLLINRNGELKLANFGLARAFGIPV-RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRP  201 (292)
T ss_dssp             ECCCCSGGGEEECTTSCEEECCCTTCEECCSCC-SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCC
T ss_pred             ecCCCCHHHEEEcCCCCEEEeecccceecCCcc-ccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCC
Confidence            599999999999999999999999998764321 2223457789999999997765 79999999999999999988777


Q ss_pred             c-ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           85 I-NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        85 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      | ...........+...........+......     .........                  .....+ .........
T Consensus       202 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-----~~~~~~~~~------------------~~~~~~-~~~~~~~~~  257 (292)
T 3o0g_A          202 LFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKL-----PDYKPYPMY------------------PATTSL-VNVVPKLNA  257 (292)
T ss_dssp             SCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGS-----TTCCCCCCC------------------CTTCCC-TTTSTTCCH
T ss_pred             CcCCCCHHHHHHHHHHHhCCCChhhhhhhccc-----ccccccccc------------------cCCcch-hhcccccCh
Confidence            5 433333333333221111111110000000     000000000                  000000 001111234


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCCC
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTMP  197 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~~  197 (231)
                      .+.+++.+||+.||++|||+.|+++|+++....|
T Consensus       258 ~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~p  291 (292)
T 3o0g_A          258 TGRDLLQNLLKCNPVQRISAEEALQHPYFSDFCP  291 (292)
T ss_dssp             HHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTC--
T ss_pred             HHHHHHHHHhccChhhCCCHHHHhcCcccccCCC
Confidence            5678999999999999999999999999976543

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.90  E-value=1.1e-23  Score=174.42  Aligned_cols=167  Identities=16%  Similarity=0.031  Sum_probs=107.8

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhC-CCCCCcccHhHHHHHHHHHhCCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTG-RVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      .||||||+||+++.++.+||+|||+++...... .......|+..|+|||++.+. .++.++||||+||++++|++|..|
T Consensus       134 vH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~  212 (346)
T 1ua2_A          134 LHRDLKPNNLLLDENGVLKLADFGLAKSFGSPN-RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPF  212 (346)
T ss_dssp             CCCCCCGGGEEECTTCCEEECCCGGGSTTTSCC-CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCS
T ss_pred             ECCCCCHHHEEEcCCCCEEEEecccceeccCCc-ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCC
Confidence            599999999999999999999999998764322 222345789999999998664 478899999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |...........+...........+.........     ........           ....     .+    .......
T Consensus       213 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~-----------~~~~-----~~----~~~~~~~  267 (346)
T 1ua2_A          213 LPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDY-----VTFKSFPG-----------IPLH-----HI----FSAAGDD  267 (346)
T ss_dssp             SCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTC-----CCCCCCCC-----------CCHH-----HH----CTTCCHH
T ss_pred             CCCCCHHHHHHHHHHHcCCCChhhhhhhccCccc-----ccccccCC-----------CChH-----Hh----hccCCHH
Confidence            9876554443333321111111000000000000     00000000           0000     00    0011245


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhcccCCCC
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNFETTMPN  198 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~~~  198 (231)
                      +.+++.+||+.||++|||+.|+++|+++.....+
T Consensus       268 ~~~li~~~L~~dP~~Rpt~~ell~h~~f~~~~~~  301 (346)
T 1ua2_A          268 LLDLIQGLFLFNPCARITATQALKMKYFSNRPGP  301 (346)
T ss_dssp             HHHHHHHHHCSSTTTSCCHHHHHTSGGGTSSSCC
T ss_pred             HHHHHHHHhccChhhCCCHHHHhcChhhhcCCCC
Confidence            7889999999999999999999999999765433

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.90  E-value=2.4e-24  Score=182.13  Aligned_cols=84  Identities=21%  Similarity=0.252  Sum_probs=63.7

Q ss_pred             eecCCCCCCeee----CCCCcEEEeccccccccCCCCC--CceeEeeccccccchhhhhhCC-CCCCcccHhHHHHHHHH
Q 045790            6 YSRSPELPPGRG----DFNFNAKLGDFGLARLMDHELG--PKTIMLVGTLAYMASEYISTGR-VSKELDVFSFRVVALEI   78 (231)
Q Consensus         6 ~~rdlk~~nil~----~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~-~~~~~Dv~s~G~vl~el   78 (231)
                      .||||||+|||+    +.++.+||+|||+++.......  .......|+..|+|||++.+.. ++.++||||+||++++|
T Consensus       150 vH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~el  229 (405)
T 3rgf_A          150 LHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAEL  229 (405)
T ss_dssp             CCCCCCGGGEEECCSSTTTTCEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHH
T ss_pred             eCCCcCHHHeEEecCCCCCCcEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHH
Confidence            599999999999    6788999999999987643211  1234567899999999997744 89999999999999999


Q ss_pred             HhCCCccccch
Q 045790           79 ATGRKVINRYK   89 (231)
Q Consensus        79 ~~g~~p~~~~~   89 (231)
                      ++|..||....
T Consensus       230 l~g~~pf~~~~  240 (405)
T 3rgf_A          230 LTSEPIFHCRQ  240 (405)
T ss_dssp             HHSSCTTCCCC
T ss_pred             HhCCCCCCCcc
Confidence            99999996543

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.90  E-value=8.5e-24  Score=173.13  Aligned_cols=172  Identities=17%  Similarity=0.070  Sum_probs=110.2

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhC-CCCCCcccHhHHHHHHHHHhCCC
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTG-RVSKELDVFSFRVVALEIATGRK   83 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~el~~g~~   83 (231)
                      -.||||||+||+++.++.+||+|||++........ ......|+..|+|||++.+. .++.++||||+||++++|++|..
T Consensus       129 ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~  207 (317)
T 2pmi_A          129 ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVN-TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKP  207 (317)
T ss_dssp             EECCCCCGGGEEECTTCCEEECCCSSCEETTSCCC-CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred             eeeCCCChHHeEEcCCCCEEECcCccceecCCCcc-cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCC
Confidence            35999999999999999999999999987643221 22345688999999999764 58999999999999999999999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||...........+...........+........  ...........             .+...+.+......    ..
T Consensus       208 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-------------~~~~~~~~~~~~~~----~~  268 (317)
T 2pmi_A          208 LFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPK--YNPNIQQRPPR-------------DLRQVLQPHTKEPL----DG  268 (317)
T ss_dssp             SCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCTT--CCTTCCCCCCC-------------CSHHHHGGGCSSCC----CH
T ss_pred             CCCCCChHHHHHHHHHHhCCCChhHhhhhhhhhh--cccccccccch-------------hHHHhhcccccccC----CH
Confidence            9987665544444332111111111100000000  00000000000             01111111111112    23


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                      .+.+++.+||+.||++|||+.|+++|+++....
T Consensus       269 ~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~  301 (317)
T 2pmi_A          269 NLMDFLHGLLQLNPDMRLSAKQALHHPWFAEYY  301 (317)
T ss_dssp             HHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGC
T ss_pred             HHHHHHHHHCCCCcccCCCHHHHhCChhhhccc
Confidence            578899999999999999999999999997644

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.90  E-value=2.1e-24  Score=180.51  Aligned_cols=136  Identities=24%  Similarity=0.162  Sum_probs=100.5

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCC-ceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGP-KTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~   83 (231)
                      .||||||+|||++.++.+||+|||+++........ ......++..|+|||++.+..++.++||||+||++|+|++ |..
T Consensus       225 vHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~  304 (370)
T 2psq_A          225 IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS  304 (370)
T ss_dssp             ECSCCCGGGEEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred             eccccchhhEEECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCC
Confidence            59999999999999999999999999865432211 1222345678999999988889999999999999999998 999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||.......                                       +...+   .          .......+.....
T Consensus       305 p~~~~~~~~---------------------------------------~~~~~---~----------~~~~~~~~~~~~~  332 (370)
T 2psq_A          305 PYPGIPVEE---------------------------------------LFKLL---K----------EGHRMDKPANCTN  332 (370)
T ss_dssp             SSTTCCGGG---------------------------------------HHHHH---H----------TTCCCCCCTTSCH
T ss_pred             CCCCCCHHH---------------------------------------HHHHH---h----------cCCCCCCCCCCCH
Confidence            996543211                                       11110   0          0011111122334


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhcc
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNFE  193 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~~  193 (231)
                      .+..++.+||+.||++|||+.|++++|...
T Consensus       333 ~l~~li~~~l~~dP~~Rpt~~ell~~L~~i  362 (370)
T 2psq_A          333 ELYMMMRDCWHAVPSQRPTFKQLVEDLDRI  362 (370)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            578899999999999999999999999863

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.90  E-value=1.3e-24  Score=179.51  Aligned_cols=138  Identities=20%  Similarity=0.144  Sum_probs=102.8

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCC-CCCcccHhHHHHHHHHHhCCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRV-SKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      .||||||+||+++.++.+||+|||++.......  .....+|++.|+|||++.+..+ +.++||||+|++++++++|..|
T Consensus       130 vH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~P  207 (336)
T 3h4j_B          130 VHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN--FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLP  207 (336)
T ss_dssp             CCCCCSTTTEEECTTCCEEECCSSCTBTTTTSB--TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCS
T ss_pred             EecCCchhhEEEcCCCCEEEEEeccceeccCCc--ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCC
Confidence            599999999999999999999999998764322  2234578999999999977665 6789999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |...........+....                                                 ..    .+......
T Consensus       208 f~~~~~~~~~~~i~~~~-------------------------------------------------~~----~p~~~s~~  234 (336)
T 3h4j_B          208 FDDEFIPNLFKKVNSCV-------------------------------------------------YV----MPDFLSPG  234 (336)
T ss_dssp             SBCSSSTTCBCCCCSSC-------------------------------------------------CC----CCTTSCHH
T ss_pred             CCCccHHHHHHHHHcCC-------------------------------------------------CC----CcccCCHH
Confidence            97543221111100000                                                 00    00011234


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhcccCCCC
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNFETTMPN  198 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~~~  198 (231)
                      +.+++.+||+.||.+|||+.|+++|+++....+.
T Consensus       235 ~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~~~~  268 (336)
T 3h4j_B          235 AQSLIRRMIVADPMQRITIQEIRRDPWFNVNLPD  268 (336)
T ss_dssp             HHHHHHTTSCSSGGGSCCHHHHTTCHHHHTTCCG
T ss_pred             HHHHHHHHcCCChhHCcCHHHHHhChhhccCCcc
Confidence            5789999999999999999999999999876543

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.90  E-value=1.7e-24  Score=179.79  Aligned_cols=162  Identities=15%  Similarity=0.067  Sum_probs=108.9

Q ss_pred             eecCCCCCCeeeCC-CCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCC-CCCCcccHhHHHHHHHHHhCCC
Q 045790            6 YSRSPELPPGRGDF-NFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGR-VSKELDVFSFRVVALEIATGRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~-~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~-~~~~~Dv~s~G~vl~el~~g~~   83 (231)
                      .||||||+|||++. ++.+||+|||++.......  ......|+..|+|||++.+.. ++.++||||+|++++++++|..
T Consensus       153 vH~Dlkp~NIll~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~  230 (360)
T 3e3p_A          153 CHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSE--PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEP  230 (360)
T ss_dssp             BCSCCCGGGEEEETTTTEEEECCCTTCBCCCTTS--CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSC
T ss_pred             ecCcCCHHHEEEeCCCCcEEEeeCCCceecCCCC--CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCC
Confidence            49999999999996 8999999999998765322  123346788999999986654 8999999999999999999999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhc------ccccCcc
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAAN------ERLDSRF  157 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~l~~~~  157 (231)
                      ||...........+...........+..+                           ..........+      .......
T Consensus       231 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~  283 (360)
T 3e3p_A          231 IFRGDNSAGQLHEIVRVLGCPSREVLRKL---------------------------NPSHTDVDLYNSKGIPWSNVFSDH  283 (360)
T ss_dssp             SSCCSSHHHHHHHHHHHHCCCCHHHHHHH---------------------------CTTCCCGGGGCCCCCCHHHHTTTC
T ss_pred             CcCCCChHHHHHHHHHHcCCCCHHHHHhc---------------------------ccchhhccccccccCCcccccchh
Confidence            99876654444433322211111100000                           00000000000      0000111


Q ss_pred             cHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          158 DEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       158 ~~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                      .......+.+|+.+||+.||++|||+.|+++|+++....
T Consensus       284 ~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~  322 (360)
T 3e3p_A          284 SLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELH  322 (360)
T ss_dssp             CCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGG
T ss_pred             hccccHHHHHHHHHHhccCccccCCHHHHhcCccccccC
Confidence            112345688999999999999999999999999997654

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.90  E-value=1.6e-24  Score=177.94  Aligned_cols=142  Identities=18%  Similarity=0.177  Sum_probs=102.1

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCC-CceeEeeccccccchhhhhhCCC-CCCcccHhHHHHHHHHHhCCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELG-PKTIMLVGTLAYMASEYISTGRV-SKELDVFSFRVVALEIATGRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~s~G~vl~el~~g~~   83 (231)
                      .||||||+||+++.++.+||+|||++........ .......|+..|+|||++.+..+ +.++||||+|+++++|++|..
T Consensus       127 vH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~  206 (323)
T 3tki_A          127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL  206 (323)
T ss_dssp             ECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSC
T ss_pred             cccccchHHEEEeCCCCEEEEEeeccceeccCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCC
Confidence            5999999999999999999999999976532211 11234578999999999977665 678999999999999999999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||.....                                     .......+...    ...   ..+      ......
T Consensus       207 pf~~~~~-------------------------------------~~~~~~~~~~~----~~~---~~~------~~~~~~  236 (323)
T 3tki_A          207 PWDQPSD-------------------------------------SCQEYSDWKEK----KTY---LNP------WKKIDS  236 (323)
T ss_dssp             SCSSSCT-------------------------------------TSHHHHHHHTT----CTT---STT------GGGSCH
T ss_pred             CCCCCch-------------------------------------HHHHHHHHhcc----ccc---CCc------cccCCH
Confidence            9964331                                     11111111100    000   000      011123


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCCC
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTMP  197 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~~  197 (231)
                      .+.+|+.+||+.||++|||+.|+++|+++.....
T Consensus       237 ~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~~~  270 (323)
T 3tki_A          237 APLALLHKILVENPSARITIPDIKKDRWYNKPLK  270 (323)
T ss_dssp             HHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCCC
T ss_pred             HHHHHHHHHccCChhhCcCHHHHhhChhhccccc
Confidence            4578999999999999999999999999976553

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.90  E-value=2.7e-23  Score=173.24  Aligned_cols=181  Identities=13%  Similarity=0.034  Sum_probs=106.0

Q ss_pred             eeecCCCCCCeeeC------CCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHH
Q 045790            5 AYSRSPELPPGRGD------FNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEI   78 (231)
Q Consensus         5 ~~~rdlk~~nil~~------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el   78 (231)
                      -.||||||+|||++      ..+.+||+|||++......    .....|+..|+|||++.+..++.++||||+|+++++|
T Consensus       153 ivH~Dikp~NIll~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el  228 (373)
T 1q8y_A          153 IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFEL  228 (373)
T ss_dssp             EECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTBC----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHH
T ss_pred             EEecCCChHHeEEeccCCCcCcceEEEcccccccccCCC----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHH
Confidence            35999999999994      4457999999999776432    1234688999999999888899999999999999999


Q ss_pred             HhCCCccccchhhh------hhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhccc
Q 045790           79 ATGRKVINRYKAQK------LRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANER  152 (231)
Q Consensus        79 ~~g~~p~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (231)
                      ++|..||.......      ....+.......+...... .......+..............|        ........ 
T Consensus       229 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~-  298 (373)
T 1q8y_A          229 ITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRN-GKYTRTFFNSRGLLRNISKLKFW--------PLEDVLTE-  298 (373)
T ss_dssp             HHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHH-CTTHHHHBCC--CBSSCCCCCBC--------CHHHHHHH-
T ss_pred             HhCCCCCCCCcccccCChHHHHHHHHHhcCCCCHHHHhc-cchhhhhcCCcchhccccccccc--------chhhhhhh-
Confidence            99999997543210      0001100000000000000 00000000000000000000000        00000011 


Q ss_pred             ccCcccHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCCCCCC
Q 045790          153 LDSRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTMPNLP  200 (231)
Q Consensus       153 l~~~~~~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~~~~~  200 (231)
                       ...++......+.+|+.+||+.||++|||+.||++|+++........
T Consensus       299 -~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~~~~  345 (373)
T 1q8y_A          299 -KYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLGMEE  345 (373)
T ss_dssp             -TTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTCTTCTT
T ss_pred             -cccCCcchHHHHHHHHHHHhccCccccCCHHHHhhChhhhcccCccc
Confidence             11244566778899999999999999999999999999987654443

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.90  E-value=5.1e-24  Score=174.80  Aligned_cols=141  Identities=20%  Similarity=0.203  Sum_probs=103.9

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCc
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      -+||||||+||+++.++.+||+|||++....... .......|+..|+|||++.+..++.++||||+|+++++|++|..|
T Consensus       162 ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p  240 (321)
T 2c30_A          162 VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV-PKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPP  240 (321)
T ss_dssp             EECCCCSGGGEEECTTCCEEECCCTTCEECCSSS-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCT
T ss_pred             eecCCCCHHHEEECCCCcEEEeeeeeeeecccCc-cccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence            3699999999999999999999999987764322 122345789999999999888899999999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |...........                                          ...      ...+.+..  .......
T Consensus       241 f~~~~~~~~~~~------------------------------------------~~~------~~~~~~~~--~~~~~~~  270 (321)
T 2c30_A          241 YFSDSPVQAMKR------------------------------------------LRD------SPPPKLKN--SHKVSPV  270 (321)
T ss_dssp             TTTSCHHHHHHH------------------------------------------HHH------SSCCCCTT--GGGSCHH
T ss_pred             CCCCCHHHHHHH------------------------------------------Hhc------CCCCCcCc--cccCCHH
Confidence            965432211111                                          000      00011100  0011234


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                      +.+++.+||+.||++|||+.++++|+++....
T Consensus       271 l~~li~~~l~~dp~~Rps~~ell~hp~~~~~~  302 (321)
T 2c30_A          271 LRDFLERMLVRDPQERATAQELLDHPFLLQTG  302 (321)
T ss_dssp             HHHHHHHHSCSSTTTSCCHHHHHTSGGGGGCC
T ss_pred             HHHHHHHHccCChhhCcCHHHHhcChhhccCC
Confidence            67889999999999999999999999997643

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.90  E-value=9.3e-25  Score=184.09  Aligned_cols=164  Identities=15%  Similarity=0.087  Sum_probs=106.3

Q ss_pred             eecCCCCCCeeeC-CCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhC-CCCCCcccHhHHHHHHHHHhCCC
Q 045790            6 YSRSPELPPGRGD-FNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTG-RVSKELDVFSFRVVALEIATGRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~-~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~el~~g~~   83 (231)
                      .||||||+|||++ .++.+||+|||+++.......  .....++..|+|||++.+. .++.++||||+||++++|++|+.
T Consensus       163 vHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~  240 (394)
T 4e7w_A          163 CHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEP--NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQP  240 (394)
T ss_dssp             ECSCCSGGGEEEETTTTEEEECCCTTCEECCTTCC--CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSC
T ss_pred             cCCCCCHHHEEEcCCCCcEEEeeCCCcccccCCCC--CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCC
Confidence            5999999999999 789999999999987643221  2345678999999998765 48999999999999999999999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||......+....+...........+....                        ..+............+...+......
T Consensus       241 pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (394)
T 4e7w_A          241 LFPGESGIDQLVEIIKVLGTPSREQIKTMN------------------------PNYMEHKFPQIRPHPFSKVFRPRTPP  296 (394)
T ss_dssp             SSCCSSHHHHHHHHHHHHCCCCHHHHHHHC------------------------GGGSSSCCCCCCCCCHHHHSCTTCCH
T ss_pred             CCCCCCHHHHHHHHHHHhCCCCHHHHHhhC------------------------hhhhhhccccccCCcHHHhccccCCH
Confidence            998765443333333211111100000000                        00000000000000000001111234


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhcccC
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNFETT  195 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~  195 (231)
                      .+.+|+.+||+.||.+|||+.|+++|+++...
T Consensus       297 ~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~  328 (394)
T 4e7w_A          297 DAIDLISRLLEYTPSARLTAIEALCHPFFDEL  328 (394)
T ss_dssp             HHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTT
T ss_pred             HHHHHHHHHhCCChhhCCCHHHHhcChhhhhh
Confidence            67889999999999999999999999999653

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.90  E-value=1.5e-24  Score=182.53  Aligned_cols=140  Identities=19%  Similarity=0.167  Sum_probs=97.1

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCC-ceeEeeccccccchhhhhh-----------CCCCCCcccHhHHH
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGP-KTIMLVGTLAYMASEYIST-----------GRVSKELDVFSFRV   73 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~-----------~~~~~~~Dv~s~G~   73 (231)
                      .||||||+|||++ ++.+||+|||+++.+...... ......|++.|+|||++.+           ..++.++||||+||
T Consensus       177 vHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGv  255 (390)
T 2zmd_A          177 VHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGC  255 (390)
T ss_dssp             CCCCCCGGGEEES-SSCEEECCCSSSCCC---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHH
T ss_pred             eecCCCHHHEEEE-CCeEEEEecCccccccCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHH
Confidence            5999999999996 578999999999876432211 1234578999999999865           35788999999999


Q ss_pred             HHHHHHhCCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccc
Q 045790           74 VALEIATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERL  153 (231)
Q Consensus        74 vl~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  153 (231)
                      ++|+|++|..||......                                         ...+..         ++++..
T Consensus       256 il~ell~G~~Pf~~~~~~-----------------------------------------~~~~~~---------~~~~~~  285 (390)
T 2zmd_A          256 ILYYMTYGKTPFQQIINQ-----------------------------------------ISKLHA---------IIDPNH  285 (390)
T ss_dssp             HHHHHHHSSCTTTTCCCH-----------------------------------------HHHHHH---------HHCTTS
T ss_pred             HHHHHHHCCCcchhhhHH-----------------------------------------HHHHHH---------HhCccc
Confidence            999999999999643210                                         001111         111111


Q ss_pred             cCcccHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          154 DSRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       154 ~~~~~~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                      ...++......+.+++.+||+.||++|||+.||++|+++....
T Consensus       286 ~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~~  328 (390)
T 2zmd_A          286 EIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT  328 (390)
T ss_dssp             CCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSCC
T ss_pred             cCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhCcCccccC
Confidence            1111111134567899999999999999999999999986544

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.90  E-value=8.7e-24  Score=176.72  Aligned_cols=172  Identities=17%  Similarity=0.053  Sum_probs=103.8

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+|||++.++.+||+|||+++.....  .......|+..|+|||++.+..++.++||||+||++++|++|..||
T Consensus       149 vH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf  226 (371)
T 2xrw_A          149 IHRDLKPSNIVVKSDCTLKILDFGLARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF  226 (371)
T ss_dssp             CCSCCCGGGEEECTTSCEEECCCCC------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSS
T ss_pred             ecccCCHHHEEEcCCCCEEEEEeecccccccc--cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCC
Confidence            59999999999999999999999999765432  1223457899999999998888999999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhh--cchhhhhhccccc---CcccHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYG--ERKLLSAANERLD---SRFDEQ  160 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~---~~~~~~  160 (231)
                      ...........+..............+                ...+..+......  .............   ......
T Consensus       227 ~~~~~~~~~~~i~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (371)
T 2xrw_A          227 PGTDHIDQWNKVIEQLGTPCPEFMKKL----------------QPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKL  290 (371)
T ss_dssp             CCSSHHHHHHHHHC-CCCCCHHHHTTS----------------CHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHH
T ss_pred             CCCCHHHHHHHHHHHhCCCCHHHHHHh----------------hhHHHHHHhhCccccccchhhhcccccCccccccccc
Confidence            876655444444332222211111000                0001111100000  0000000111110   011122


Q ss_pred             HHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccC
Q 045790          161 QMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETT  195 (231)
Q Consensus       161 ~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~  195 (231)
                      ....+.+|+.+||+.||++|||+.|+++|+++...
T Consensus       291 ~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~  325 (371)
T 2xrw_A          291 KASQARDLLSKMLVIDASKRISVDEALQHPYINVW  325 (371)
T ss_dssp             HHHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTT
T ss_pred             ccHHHHHHHHHHCcCChhhCCCHHHHhCCcchhhh
Confidence            35678899999999999999999999999998643

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.90  E-value=6.1e-24  Score=175.60  Aligned_cols=135  Identities=19%  Similarity=0.170  Sum_probs=102.1

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+|||++.++.+||+|||+++..... .......+|++.|+|||++.+..++.++|+||+|+++++|++|..||
T Consensus       127 vHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf  205 (337)
T 1o6l_A          127 VYRDIKLENLMLDKDGHIKITDFGLCKEGISD-GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF  205 (337)
T ss_dssp             BCCCCCGGGEEECTTSCEEECCCTTCBCSCCT-TCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSS
T ss_pred             ecCcCCHHHEEECCCCCEEEeeccchhhcccC-CCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCC
Confidence            59999999999999999999999999764321 12234567999999999998888999999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      ...........+                                          ....       ..+    +......+
T Consensus       206 ~~~~~~~~~~~i------------------------------------------~~~~-------~~~----p~~~s~~~  232 (337)
T 1o6l_A          206 YNQDHERLFELI------------------------------------------LMEE-------IRF----PRTLSPEA  232 (337)
T ss_dssp             CCSSHHHHHHHH------------------------------------------HHCC-------CCC----CTTSCHHH
T ss_pred             CCCCHHHHHHHH------------------------------------------HcCC-------CCC----CCCCCHHH
Confidence            754422111111                                          1000       011    11122356


Q ss_pred             HHHHHhhcCCCCCCCC-----CHHHHHHHHhccc
Q 045790          166 LIVGLWCAHPDRCFRP-----SIRQAIQVLNFET  194 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rp-----s~~ell~~l~~~~  194 (231)
                      ..++.+||+.||++||     ++.+|++|++|..
T Consensus       233 ~~li~~lL~~dP~~R~g~~~~~~~ei~~h~~f~~  266 (337)
T 1o6l_A          233 KSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLS  266 (337)
T ss_dssp             HHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTT
T ss_pred             HHHHHHHhhcCHHHhcCCCCCCHHHHHcCCCcCC
Confidence            7889999999999999     9999999999854

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.89  E-value=2.4e-24  Score=178.91  Aligned_cols=136  Identities=22%  Similarity=0.164  Sum_probs=99.8

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCC-ceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGP-KTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~   83 (231)
                      .||||||+||+++.++.+||+|||++......... ......|+..|+|||++.+..++.++||||+|+++++|++ |..
T Consensus       215 vH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~  294 (359)
T 3vhe_A          215 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS  294 (359)
T ss_dssp             CCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCC
T ss_pred             ccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCC
Confidence            59999999999999999999999999866433222 2334567889999999988889999999999999999998 999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||......                                      ..+...+.    ..         .....+.....
T Consensus       295 p~~~~~~~--------------------------------------~~~~~~~~----~~---------~~~~~~~~~~~  323 (359)
T 3vhe_A          295 PYPGVKID--------------------------------------EEFCRRLK----EG---------TRMRAPDYTTP  323 (359)
T ss_dssp             SSTTCCCS--------------------------------------HHHHHHHH----HT---------CCCCCCTTCCH
T ss_pred             CCCccchh--------------------------------------HHHHHHHH----cC---------CCCCCCCCCCH
Confidence            99643211                                      01111100    00         00011111224


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      .+.+++.+||+.||++|||+.+|++||..
T Consensus       324 ~l~~li~~~l~~dP~~Rps~~ell~~L~~  352 (359)
T 3vhe_A          324 EMYQTMLDCWHGEPSQRPTFSELVEHLGN  352 (359)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHHHHHccCChhhCCCHHHHHHHHHH
Confidence            57788999999999999999999999975

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.89  E-value=2.6e-24  Score=174.44  Aligned_cols=136  Identities=17%  Similarity=0.050  Sum_probs=98.8

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCC---CCCCcccHhHHHHHHHHHhCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGR---VSKELDVFSFRVVALEIATGR   82 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~---~~~~~Dv~s~G~vl~el~~g~   82 (231)
                      .||||||+||+++.++.+||+|||++....... .......|+..|+|||.+.+..   ++.++||||+|+++++|++|.
T Consensus       159 vH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~  237 (298)
T 2zv2_A          159 IHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSD-ALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ  237 (298)
T ss_dssp             ECCCCCGGGEEECTTSCEEECCCTTCEECSSSS-CEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSS
T ss_pred             eccCCCHHHEEECCCCCEEEecCCCcccccccc-ccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCC
Confidence            599999999999999999999999998765322 2233457899999999986654   367789999999999999999


Q ss_pred             CccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           83 KVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        83 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      .||......                                          .+...... ....      .  .......
T Consensus       238 ~pf~~~~~~------------------------------------------~~~~~~~~-~~~~------~--~~~~~~~  266 (298)
T 2zv2_A          238 CPFMDERIM------------------------------------------CLHSKIKS-QALE------F--PDQPDIA  266 (298)
T ss_dssp             CSSCCSSHH------------------------------------------HHHHHHHH-CCCC------C--CSSSCCC
T ss_pred             CCCCCccHH------------------------------------------HHHHHHhc-ccCC------C--CCccccC
Confidence            999653321                                          11111100 0000      0  0000112


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHhcc
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLNFE  193 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~  193 (231)
                      ..+.+++.+||+.||++|||+.||++|+++.
T Consensus       267 ~~l~~li~~~l~~dp~~R~s~~e~l~hp~~~  297 (298)
T 2zv2_A          267 EDLKDLITRMLDKNPESRIVVPEIKLHPWVT  297 (298)
T ss_dssp             HHHHHHHHHHTCSCTTTSCCHHHHTTCHHHH
T ss_pred             HHHHHHHHHHhhcChhhCCCHHHHhcCcccc
Confidence            4567899999999999999999999999874

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.89  E-value=1.8e-24  Score=179.87  Aligned_cols=135  Identities=16%  Similarity=0.129  Sum_probs=99.5

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+|||++.++.+||+|||+++..... .......+|++.|+|||++.+..++.++|+||+||++++|++|..||
T Consensus       146 vHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf  224 (353)
T 3txo_A          146 IYRDLKLDNVLLDHEGHCKLADFGMCKEGICN-GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPF  224 (353)
T ss_dssp             BCCCCCGGGEEECTTSCEEECCCTTCBCSCC----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSS
T ss_pred             cccCCCHHHEEECCCCCEEEccccceeecccC-CccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCC
Confidence            59999999999999999999999999754321 22234568999999999998888999999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      ...........+....                                                 ..    ++......+
T Consensus       225 ~~~~~~~~~~~i~~~~-------------------------------------------------~~----~p~~~~~~~  251 (353)
T 3txo_A          225 EAENEDDLFEAILNDE-------------------------------------------------VV----YPTWLHEDA  251 (353)
T ss_dssp             CCSSHHHHHHHHHHCC-------------------------------------------------CC----CCTTSCHHH
T ss_pred             CCCCHHHHHHHHHcCC-------------------------------------------------CC----CCCCCCHHH
Confidence            7654332222211100                                                 00    111122346


Q ss_pred             HHHHHhhcCCCCCCCCCH------HHHHHHHhccc
Q 045790          166 LIVGLWCAHPDRCFRPSI------RQAIQVLNFET  194 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps~------~ell~~l~~~~  194 (231)
                      ..++.+||+.||++||++      .++++|++|..
T Consensus       252 ~~li~~lL~~dP~~R~~~~~~~~~~~il~hp~f~~  286 (353)
T 3txo_A          252 TGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKE  286 (353)
T ss_dssp             HHHHHHHTCSSGGGSTTSGGGTCTHHHHTSGGGTT
T ss_pred             HHHHHHHhhhCHHHccCCcccCCHHHHhhCCcccC
Confidence            788999999999999998      99999999964

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.89  E-value=1.4e-24  Score=181.54  Aligned_cols=141  Identities=10%  Similarity=-0.039  Sum_probs=99.0

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhh--CCCCCCcccHhHHHHHHHHHhCCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIST--GRVSKELDVFSFRVVALEIATGRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~~Dv~s~G~vl~el~~g~~   83 (231)
                      .||||||+|||++.++.+||+|||+++....    ......++..|+|||++.+  ..++.++||||+||++|+|++|..
T Consensus       216 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~  291 (371)
T 3q60_A          216 VHGHFTPDNLFIMPDGRLMLGDVSALWKVGT----RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFL  291 (371)
T ss_dssp             EETTCSGGGEEECTTSCEEECCGGGEEETTC----EEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSC
T ss_pred             ccCcCCHHHEEECCCCCEEEEecceeeecCC----CccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCC
Confidence            5999999999999999999999999987542    1223456689999999976  568999999999999999999999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||........ .......                                           ........+..........
T Consensus       292 Pf~~~~~~~~-~~~~~~~-------------------------------------------~~~~~~~~~~~~~~~~~~~  327 (371)
T 3q60_A          292 PFGLVTPGIK-GSWKRPS-------------------------------------------LRVPGTDSLAFGSCTPLPD  327 (371)
T ss_dssp             STTBCCTTCT-TCCCBCC-------------------------------------------TTSCCCCSCCCTTSSCCCH
T ss_pred             CCCCcCcccc-cchhhhh-------------------------------------------hhhccccccchhhccCCCH
Confidence            9976532100 0000000                                           0000000000000001124


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      .+.+++.+||+.||++|||+.++++|+++..
T Consensus       328 ~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~  358 (371)
T 3q60_A          328 FVKTLIGRFLNFDRRRRLLPLEAMETPEFLQ  358 (371)
T ss_dssp             HHHHHHHHHTCSSTTTCCCHHHHTTSHHHHH
T ss_pred             HHHHHHHHHcCCChhhCCCHHHHhcCHHHHH
Confidence            5678999999999999999999999999854

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.89  E-value=2.1e-23  Score=172.87  Aligned_cols=170  Identities=15%  Similarity=-0.019  Sum_probs=108.3

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCC---CceeEeeccccccchhhhhhC-CCCCCcccHhHHHHHHHHHhC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELG---PKTIMLVGTLAYMASEYISTG-RVSKELDVFSFRVVALEIATG   81 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~el~~g   81 (231)
                      .||||||+||+++.++.+||+|||+++.......   .......|+..|+|||++.+. .++.++||||+||++++|++|
T Consensus       146 vH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g  225 (351)
T 3mi9_A          146 LHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTR  225 (351)
T ss_dssp             ECCCCSGGGEEECTTSCEEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHS
T ss_pred             eCCCCCHHHEEEcCCCCEEEccchhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhC
Confidence            5999999999999999999999999976542211   112345678999999998764 479999999999999999999


Q ss_pred             CCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHH
Q 045790           82 RKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQ  161 (231)
Q Consensus        82 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  161 (231)
                      ..||...........+...........+................ .....+...+...                    ..
T Consensus       226 ~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--------------------~~  284 (351)
T 3mi9_A          226 SPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVK-GQKRKVKDRLKAY--------------------VR  284 (351)
T ss_dssp             SCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCS-SCCCCHHHHHHHH--------------------HC
T ss_pred             CCCCCCCChHHHHHHHHHHhCCCChhhccccccchhhccccccc-ccccCHHHHhhhc--------------------cC
Confidence            99998766554444443211111111111000000000000000 0000000000000                    00


Q ss_pred             HHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          162 MTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       162 ~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                      ...+.+|+.+||+.||++|||+.|+++|+++....
T Consensus       285 ~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~  319 (351)
T 3mi9_A          285 DPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDP  319 (351)
T ss_dssp             CHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGSSS
T ss_pred             ChHHHHHHHHHhcCChhhCCCHHHHhCCCCcCCCC
Confidence            13467899999999999999999999999997644

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.89  E-value=1.9e-24  Score=177.30  Aligned_cols=158  Identities=19%  Similarity=0.117  Sum_probs=103.3

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCC-ceeEeeccccccchhhhhhC-----CCCCCcccHhHHHHHHHH
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGP-KTIMLVGTLAYMASEYISTG-----RVSKELDVFSFRVVALEI   78 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~-----~~~~~~Dv~s~G~vl~el   78 (231)
                      -.||||||+|||++.++.+||+|||+++........ ......|+..|+|||++.+.     .++.++||||+||++|+|
T Consensus       152 ivH~Dlkp~Nill~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el  231 (322)
T 3soc_A          152 ISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWEL  231 (322)
T ss_dssp             EECSCCSGGGEEECTTCCEEECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEeCCCChHhEEECCCCeEEEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHH
Confidence            459999999999999999999999999776533221 12335789999999998763     345678999999999999


Q ss_pred             HhCCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcc-
Q 045790           79 ATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRF-  157 (231)
Q Consensus        79 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-  157 (231)
                      ++|+.||..........                     .....     ........+...... ..    ..+.+.... 
T Consensus       232 ~tg~~pf~~~~~~~~~~---------------------~~~~~-----~~~~~~~~~~~~~~~-~~----~~~~~~~~~~  280 (322)
T 3soc_A          232 ASRCTAADGPVDEYMLP---------------------FEEEI-----GQHPSLEDMQEVVVH-KK----KRPVLRDYWQ  280 (322)
T ss_dssp             HTTBTTSSSCCCCCCCT---------------------THHHH-----CSSCCHHHHHHHHTT-SC----CCCCCCGGGG
T ss_pred             HhCCCCCCCCcchhccc---------------------hhhhh-----ccCCchhhhhhhhhc-cc----CCCCcccccc
Confidence            99999997533110000                     00000     000111111111111 10    111111111 


Q ss_pred             cHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcc
Q 045790          158 DEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFE  193 (231)
Q Consensus       158 ~~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~  193 (231)
                      .......+.+++.+||+.||++|||+.+|++.|...
T Consensus       281 ~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l  316 (322)
T 3soc_A          281 KHAGMAMLCETIEECWDHDAEARLSAGCVGERITQM  316 (322)
T ss_dssp             SSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             ccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            124556789999999999999999999999999764

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.89  E-value=3.5e-24  Score=172.95  Aligned_cols=164  Identities=15%  Similarity=0.077  Sum_probs=101.8

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhC-CCCCCcccHhHHHHHHHHHhCCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTG-RVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      .||||||+||+++.++.+||+|||++....... .......|+..|+|||++.+. .++.++||||+|++++++++|..|
T Consensus       122 ~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~p  200 (288)
T 1ob3_A          122 LHRDLKPQNLLINREGELKIADFGLARAFGIPV-RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPL  200 (288)
T ss_dssp             CCSCCCGGGEEECTTSCEEECCTTHHHHHCC----------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             ecCCCCHHHEEEcCCCCEEEeECccccccCccc-cccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence            599999999999999999999999997654321 122345789999999999764 488999999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |......+....+...........+.....     ...-.  .   .+          .............    .....
T Consensus       201 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~--~---~~----------~~~~~~~~~~~~~----~~~~~  256 (288)
T 1ob3_A          201 FPGVSEADQLMRIFRILGTPNSKNWPNVTE-----LPKYD--P---NF----------TVYEPLPWESFLK----GLDES  256 (288)
T ss_dssp             CCCSSHHHHHHHHHHHHCCCCTTTSTTGGG-----STTCC--T---TC----------CCCCCCCGGGTCC----SCCHH
T ss_pred             CCCCCHHHHHHHHHHHHCCCChhhchhhhc-----ccccc--c---cc----------ccccCccHHHHhh----hcCHH
Confidence            987654443333322111110000000000     00000  0   00          0000000000001    11235


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      +.+++.+||+.||++|||+.|+++|+++..
T Consensus       257 ~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~  286 (288)
T 1ob3_A          257 GIDLLSKMLKLDPNQRITAKQALEHAYFKE  286 (288)
T ss_dssp             HHHHHHHHTCSSTTTSCCHHHHHTSGGGGC
T ss_pred             HHHHHHHHcCCCcccCCCHHHHhcCcchhh
Confidence            678999999999999999999999999864

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.89  E-value=3.2e-24  Score=179.21  Aligned_cols=166  Identities=18%  Similarity=0.119  Sum_probs=110.0

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhh-CCCCCCcccHhHHHHHHHHHhCCC
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIST-GRVSKELDVFSFRVVALEIATGRK   83 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~el~~g~~   83 (231)
                      -.||||||+||+++.++.+||+|||+++.....    .....++..|+|||++.+ ..++.++||||+||++++|++|+.
T Consensus       149 ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~  224 (367)
T 1cm8_A          149 IIHRDLKPGNLAVNEDCELKILDFGLARQADSE----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKT  224 (367)
T ss_dssp             EECCCCCGGGEEECTTCCEEECCCTTCEECCSS----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSC
T ss_pred             ccccCcCHHHEEEcCCCCEEEEeeecccccccc----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCC
Confidence            369999999999999999999999999875432    233567899999999877 568999999999999999999999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||......+....+...........+..+               .......+......      .....+. ........
T Consensus       225 pf~~~~~~~~l~~i~~~~g~~~~~~~~~~---------------~~~~~~~~~~~~~~------~~~~~~~-~~~~~~~~  282 (367)
T 1cm8_A          225 LFKGSDHLDQLKEIMKVTGTPPAEFVQRL---------------QSDEAKNYMKGLPE------LEKKDFA-SILTNASP  282 (367)
T ss_dssp             SSCCSSHHHHHHHHHHHHCCCCHHHHHTC---------------SCHHHHHHHHHSCC------CCCCCGG-GTCTTCCH
T ss_pred             CCCCCCHHHHHHHHHHhcCCCCHHHHHHh---------------hhHHHHHHHHhCCC------CCCCCHH-HHCCCCCH
Confidence            99876655444444332222111111000               00001111111000      0000000 00011234


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                      .+.+|+.+||+.||++|||+.++++|+++....
T Consensus       283 ~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~~  315 (367)
T 1cm8_A          283 LAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH  315 (367)
T ss_dssp             HHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred             HHHHHHHHHccCChhHCCCHHHHhcChHHHhhc
Confidence            577899999999999999999999999996543

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.89  E-value=1.5e-23  Score=176.02  Aligned_cols=169  Identities=11%  Similarity=-0.010  Sum_probs=105.7

Q ss_pred             eeecCCCCCCeeeCCCC-------------------------------------------------cEEEeccccccccC
Q 045790            5 AYSRSPELPPGRGDFNF-------------------------------------------------NAKLGDFGLARLMD   35 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~-------------------------------------------------~~kl~Dfg~~~~~~   35 (231)
                      -.||||||+|||++.++                                                 .+||+|||++....
T Consensus       168 ivHrDikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~  247 (397)
T 1wak_A          168 IIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVH  247 (397)
T ss_dssp             EECCCCSGGGEEECCCHHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETT
T ss_pred             EecCCCCHHHeeEeccchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccc
Confidence            45999999999998765                                                 79999999998764


Q ss_pred             CCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCccccchhhh------hhhhccccCCCCCCccc
Q 045790           36 HELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVINRYKAQK------LRTQFVVPHPCSNTGSV  109 (231)
Q Consensus        36 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~~~~~~~~------~~~~~~~~~~~~~~~~~  109 (231)
                      ..    .....|+..|+|||++.+..++.++||||+||++++|++|..||.......      ....+.......+...+
T Consensus       248 ~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~  323 (397)
T 1wak_A          248 KH----FTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLI  323 (397)
T ss_dssp             BC----SCSCCSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHH
T ss_pred             cc----CccCCCCCcccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHh
Confidence            32    223468999999999988889999999999999999999999997543110      00000000000000000


Q ss_pred             ccc--c---cccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHHHHHHHhhcCCCCCCCCCHH
Q 045790          110 EKL--G---VEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCLLIVGLWCAHPDRCFRPSIR  184 (231)
Q Consensus       110 ~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~c~~~dp~~Rps~~  184 (231)
                      ...  .   ......+..... .....+.             ......  ..........+.+|+.+||+.||++|||+.
T Consensus       324 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-------------~~~~~~--~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~  387 (397)
T 1wak_A          324 VAGKYSKEFFTKKGDLKHITK-LKPWGLF-------------EVLVEK--YEWSQEEAAGFTDFLLPMLELIPEKRATAA  387 (397)
T ss_dssp             HHCTTGGGTBCTTSSBSSCCC-CCCCCHH-------------HHHHHT--SCCCHHHHHHHHHHHGGGGCSSGGGSCCHH
T ss_pred             hcccccccccCCccccccccc-cCCcchh-------------Hhhhhh--cccchhhHHHHHHHHHHHhccChhhcCCHH
Confidence            000  0   000000000000 0000000             000011  123456677899999999999999999999


Q ss_pred             HHHHHHhcc
Q 045790          185 QAIQVLNFE  193 (231)
Q Consensus       185 ell~~l~~~  193 (231)
                      ||++|+++.
T Consensus       388 e~l~hp~~~  396 (397)
T 1wak_A          388 ECLRHPWLN  396 (397)
T ss_dssp             HHHTSGGGG
T ss_pred             HHhhCcccc
Confidence            999999985

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.89  E-value=6.7e-24  Score=179.19  Aligned_cols=144  Identities=14%  Similarity=0.057  Sum_probs=97.5

Q ss_pred             eecCCCCCCeeeCC---CCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCC
Q 045790            6 YSRSPELPPGRGDF---NFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGR   82 (231)
Q Consensus         6 ~~rdlk~~nil~~~---~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~   82 (231)
                      .||||||+|||++.   ++.+||+|||+++.....  ......+|+..|+|||++.+..++.++||||+||++|+|++|.
T Consensus       183 vHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~  260 (400)
T 1nxk_A          183 AHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH--NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGY  260 (400)
T ss_dssp             ECCCCCGGGEEESSSSTTCCEEECCCTTCEECC-------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSS
T ss_pred             cccCcCcceEEEecCCCCccEEEEecccccccCCC--CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCC
Confidence            59999999999997   788999999999865422  2234567899999999998888999999999999999999999


Q ss_pred             CccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           83 KVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        83 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      .||......                                   .........+..    ...      .+.........
T Consensus       261 ~pf~~~~~~-----------------------------------~~~~~~~~~i~~----~~~------~~~~~~~~~~s  295 (400)
T 1nxk_A          261 PPFYSNHGL-----------------------------------AISPGMKTRIRM----GQY------EFPNPEWSEVS  295 (400)
T ss_dssp             CSCCCCTTC-----------------------------------SSCCSHHHHHHH----TCC------CCCTTTTTTSC
T ss_pred             CCCCCCccc-----------------------------------cccHHHHHHHHc----Ccc------cCCCcccccCC
Confidence            999754311                                   000001111100    000      00000001122


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                      ..+.+|+.+||+.||++|||+.+|++|+++....
T Consensus       296 ~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~~  329 (400)
T 1nxk_A          296 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST  329 (400)
T ss_dssp             HHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHTTT
T ss_pred             HHHHHHHHHHCCCChhHCcCHHHHhcCccccCCC
Confidence            4567899999999999999999999999996543

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.89  E-value=1.6e-23  Score=174.56  Aligned_cols=145  Identities=14%  Similarity=-0.039  Sum_probs=103.9

Q ss_pred             eecCCCCCCeeeC--CCCcEEEeccccccccCCCCCC------ceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHH
Q 045790            6 YSRSPELPPGRGD--FNFNAKLGDFGLARLMDHELGP------KTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALE   77 (231)
Q Consensus         6 ~~rdlk~~nil~~--~~~~~kl~Dfg~~~~~~~~~~~------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~e   77 (231)
                      .||||||+|||++  .++.+||+|||+++.+......      ......|+..|+|||++.+..++.++||||+|+++|+
T Consensus       174 iHrDlkp~Nill~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~e  253 (364)
T 3op5_A          174 VHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQ  253 (364)
T ss_dssp             ECCCCCGGGEEEESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHH
T ss_pred             EEecCCHHHEEEecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHH
Confidence            5999999999999  8899999999999766432111      1133458999999999988889999999999999999


Q ss_pred             HHhCCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcc
Q 045790           78 IATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRF  157 (231)
Q Consensus        78 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  157 (231)
                      |++|+.||.....                                      ............ ...+....++.+... 
T Consensus       254 l~~g~~Pf~~~~~--------------------------------------~~~~~~~~~~~~-~~~~~~~~~~~~~~~-  293 (364)
T 3op5_A          254 WLTGHLPWEDNLK--------------------------------------DPKYVRDSKIRY-RENIASLMDKCFPAA-  293 (364)
T ss_dssp             HHHSCCTTGGGTT--------------------------------------CHHHHHHHHHHH-HHCHHHHHHHHSCTT-
T ss_pred             HHhCCCCcccccc--------------------------------------CHHHHHHHHHHh-hhhHHHHHHHhcccc-
Confidence            9999999975321                                      111111111111 112233333333211 


Q ss_pred             cHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          158 DEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       158 ~~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                        .....+..++..||+.||++||++.+|++.|..
T Consensus       294 --~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~  326 (364)
T 3op5_A          294 --NAPGEIAKYMETVKLLDYTEKPLYENLRDILLQ  326 (364)
T ss_dssp             --CCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHH
T ss_pred             --cCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence              113457788999999999999999999998876

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.89  E-value=1.8e-23  Score=178.79  Aligned_cols=139  Identities=15%  Similarity=0.060  Sum_probs=102.1

Q ss_pred             eecCCCCCCeeeC---CCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCC
Q 045790            6 YSRSPELPPGRGD---FNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGR   82 (231)
Q Consensus         6 ~~rdlk~~nil~~---~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~   82 (231)
                      .||||||+|||++   .++.+||+|||++....... .......|++.|+|||++.+..++.++||||+||++++|++|.
T Consensus       132 vHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~-~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~  210 (444)
T 3soa_A          132 VHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ-QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGY  210 (444)
T ss_dssp             BCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTC-CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSS
T ss_pred             cccCCCHHHEEEeccCCCCcEEEccCceeEEecCCC-ceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCC
Confidence            5999999999998   45789999999997765322 2223457899999999998888999999999999999999999


Q ss_pred             CccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           83 KVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        83 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      .||...........+.......                                            ..+..     ....
T Consensus       211 ~Pf~~~~~~~~~~~i~~~~~~~--------------------------------------------~~~~~-----~~~s  241 (444)
T 3soa_A          211 PPFWDEDQHRLYQQIKAGAYDF--------------------------------------------PSPEW-----DTVT  241 (444)
T ss_dssp             CSCCCSSHHHHHHHHHHTCCCC--------------------------------------------CTTTT-----TTSC
T ss_pred             CCCCCccHHHHHHHHHhCCCCC--------------------------------------------Ccccc-----ccCC
Confidence            9997654332222211100000                                            00000     0112


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      ..+.+++..||+.||++|||+.|+++|+++..
T Consensus       242 ~~~~~li~~~L~~dP~~Rpta~e~L~hp~~~~  273 (444)
T 3soa_A          242 PEAKDLINKMLTINPSKRITAAEALKHPWISH  273 (444)
T ss_dssp             HHHHHHHHHHSCSSTTTSCCHHHHHHSCTTHH
T ss_pred             HHHHHHHHHHcCCChhHCCCHHHHhcCccccC
Confidence            34678999999999999999999999999853

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.89  E-value=6.6e-24  Score=170.43  Aligned_cols=137  Identities=16%  Similarity=0.149  Sum_probs=100.5

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+||+++.++.+||+|||++......   ......|+..|+|||.+.+..++.++||||+|++++++++|..||
T Consensus       131 ~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~  207 (279)
T 3fdn_A          131 IHRDIKPENLLLGSAGELKIADFGWSVHAPSS---RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF  207 (279)
T ss_dssp             EECCCCGGGEEECTTSCEEECSCCEESCC-----------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTT
T ss_pred             ecccCChHhEEEcCCCCEEEEeccccccCCcc---cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCC
Confidence            59999999999999999999999988654322   223457889999999998888899999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      ...........+..                                                 ....    .+......+
T Consensus       208 ~~~~~~~~~~~~~~-------------------------------------------------~~~~----~~~~~~~~~  234 (279)
T 3fdn_A          208 EANTYQETYKRISR-------------------------------------------------VEFT----FPDFVTEGA  234 (279)
T ss_dssp             CCSSHHHHHHHHHH-------------------------------------------------TCCC----CCTTSCHHH
T ss_pred             CCCcHHHHHHHHHh-------------------------------------------------CCCC----CCCcCCHHH
Confidence            75432211111100                                                 0001    111122456


Q ss_pred             HHHHHhhcCCCCCCCCCHHHHHHHHhcccCCCC
Q 045790          166 LIVGLWCAHPDRCFRPSIRQAIQVLNFETTMPN  198 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~~~  198 (231)
                      .+++.+||+.||++|||+.||++|+++......
T Consensus       235 ~~li~~~l~~~p~~Rps~~e~l~h~~~~~~~~~  267 (279)
T 3fdn_A          235 RDLISRLLKHNPSQRPMLREVLEHPWITANSSK  267 (279)
T ss_dssp             HHHHHHHCCSSGGGSCCHHHHHHCHHHHHHCSS
T ss_pred             HHHHHHHhccChhhCCCHHHHhhCccccCCccC
Confidence            789999999999999999999999999765433

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.89  E-value=7.3e-24  Score=181.64  Aligned_cols=137  Identities=20%  Similarity=0.149  Sum_probs=97.0

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~p   84 (231)
                      .||||||+|||++.++.+||+|||+++..............++..|+|||.+....++.++||||+|+++|++++ |..|
T Consensus       302 vHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P  381 (452)
T 1fmk_A          302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP  381 (452)
T ss_dssp             CCSCCSGGGEEECGGGCEEECCCCTTC--------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCS
T ss_pred             eCCCCChhhEEECCCCCEEECCCccceecCCCceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCC
Confidence            599999999999999999999999998764332222233456778999999988899999999999999999999 8999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |......+....+                                          .          ...+...+......
T Consensus       382 ~~~~~~~~~~~~i------------------------------------------~----------~~~~~~~~~~~~~~  409 (452)
T 1fmk_A          382 YPGMVNREVLDQV------------------------------------------E----------RGYRMPCPPECPES  409 (452)
T ss_dssp             STTCCHHHHHHHH------------------------------------------H----------TTCCCCCCTTSCHH
T ss_pred             CCCCCHHHHHHHH------------------------------------------H----------cCCCCCCCCCCCHH
Confidence            9754322111111                                          0          00111111223346


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      +.+++.+||+.||++|||+.+|++.|+...
T Consensus       410 l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~  439 (452)
T 1fmk_A          410 LHDLMCQCWRKEPEERPTFEYLQAFLEDYF  439 (452)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHHHTTT
T ss_pred             HHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence            778999999999999999999999998654

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.89  E-value=4.4e-24  Score=171.74  Aligned_cols=135  Identities=24%  Similarity=0.201  Sum_probs=89.5

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~p   84 (231)
                      +||||||+||+++.++.+||+|||+++..............++..|+|||.+.+..++.++||||+|++++++++ |..|
T Consensus       138 ~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p  217 (281)
T 1mp8_A          138 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP  217 (281)
T ss_dssp             CCSCCSGGGEEEEETTEEEECC-------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCT
T ss_pred             ecccccHHHEEECCCCCEEECccccccccCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCC
Confidence            599999999999999999999999998765432222333456778999999988889999999999999999996 8999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |......+                                       ....+   ....          ....+......
T Consensus       218 f~~~~~~~---------------------------------------~~~~i---~~~~----------~~~~~~~~~~~  245 (281)
T 1mp8_A          218 FQGVKNND---------------------------------------VIGRI---ENGE----------RLPMPPNCPPT  245 (281)
T ss_dssp             TTTCCGGG---------------------------------------HHHHH---HTTC----------CCCCCTTCCHH
T ss_pred             CCcCCHHH---------------------------------------HHHHH---HcCC----------CCCCCCCCCHH
Confidence            97543221                                       11110   0000          00011122345


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      +..++.+||+.||++|||+.+|+++|..
T Consensus       246 l~~li~~~l~~~p~~Rps~~~l~~~l~~  273 (281)
T 1mp8_A          246 LYSLMTKCWAYDPSRRPRFTELKAQLST  273 (281)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence            6789999999999999999999999875

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.89  E-value=6.3e-24  Score=181.70  Aligned_cols=137  Identities=20%  Similarity=0.179  Sum_probs=102.7

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCc
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      -.||||||+|||++.++.+||+|||+++..... .......+|++.|+|||++.+..++.++||||+||++++|++|..|
T Consensus       270 iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~P  348 (446)
T 4ejn_A          270 VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD-GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP  348 (446)
T ss_dssp             CCCCCCCGGGEEECSSSCEEECCCCCCCTTCC------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             EEECCCCHHHEEECCCCCEEEccCCCceeccCC-CcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCC
Confidence            359999999999999999999999998754321 1223446789999999999888899999999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |...........+..                                          ..       ..+..    .....
T Consensus       349 f~~~~~~~~~~~i~~------------------------------------------~~-------~~~p~----~~~~~  375 (446)
T 4ejn_A          349 FYNQDHEKLFELILM------------------------------------------EE-------IRFPR----TLGPE  375 (446)
T ss_dssp             SCCSSHHHHHHHHHH------------------------------------------CC-------CCCCT----TSCHH
T ss_pred             CCCCCHHHHHHHHHh------------------------------------------CC-------CCCCc----cCCHH
Confidence            975443211111110                                          00       00111    11245


Q ss_pred             HHHHHHhhcCCCCCCCC-----CHHHHHHHHhcccC
Q 045790          165 LLIVGLWCAHPDRCFRP-----SIRQAIQVLNFETT  195 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rp-----s~~ell~~l~~~~~  195 (231)
                      +.+++.+||+.||++||     ++.|+++|+++...
T Consensus       376 ~~~li~~~L~~dP~~R~~~~~~t~~ell~hp~f~~~  411 (446)
T 4ejn_A          376 AKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGI  411 (446)
T ss_dssp             HHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred             HHHHHHHHcccCHHHhCCCCCCCHHHHHhCccccCC
Confidence            67899999999999999     99999999999764

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.89  E-value=8.1e-24  Score=181.52  Aligned_cols=76  Identities=25%  Similarity=0.229  Sum_probs=60.0

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCC--------------------------CceeEeeccccccchhhhh-
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELG--------------------------PKTIMLVGTLAYMASEYIS-   58 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~--------------------------~~~~~~~g~~~y~aPE~~~-   58 (231)
                      .||||||+|||++.++.+||+|||+++.......                          ......+||..|+|||++. 
T Consensus       178 iHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~  257 (458)
T 3rp9_A          178 LHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILL  257 (458)
T ss_dssp             BCCCCCGGGEEECTTCCEEECCCTTCBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTT
T ss_pred             CCCCCChhhEEECCCCCEeecccccchhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhC
Confidence            5999999999999999999999999987642211                          0123457899999999874 


Q ss_pred             hCCCCCCcccHhHHHHHHHHHhC
Q 045790           59 TGRVSKELDVFSFRVVALEIATG   81 (231)
Q Consensus        59 ~~~~~~~~Dv~s~G~vl~el~~g   81 (231)
                      ...++.++||||+||+++||++|
T Consensus       258 ~~~~~~~~DiwSlG~il~elltg  280 (458)
T 3rp9_A          258 QENYTEAIDVWSIGCIFAELLNM  280 (458)
T ss_dssp             CCCCCTHHHHHHHHHHHHHHHTT
T ss_pred             CCCCCcHhHHHHHHHHHHHHHHh
Confidence            45689999999999999999994

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.89  E-value=3.7e-23  Score=170.10  Aligned_cols=158  Identities=15%  Similarity=0.086  Sum_probs=100.0

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCc---eeEeeccccccchhhhhhCCCCCC------cccHhHHHHH
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPK---TIMLVGTLAYMASEYISTGRVSKE------LDVFSFRVVA   75 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~------~Dv~s~G~vl   75 (231)
                      -.||||||+||+++.++.+||+|||++..........   .....|+..|+|||++.+......      +||||+||++
T Consensus       163 ivH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il  242 (337)
T 3mdy_A          163 IAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLIL  242 (337)
T ss_dssp             EECSCCCGGGEEECTTSCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHH
T ss_pred             EEecccchHHEEECCCCCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHH
Confidence            3599999999999999999999999997654322211   123478999999999977666555      8999999999


Q ss_pred             HHHHhCCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccC
Q 045790           76 LEIATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDS  155 (231)
Q Consensus        76 ~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  155 (231)
                      |+|++|..|+......      .  .+.                 ....  ......... ........    ..+....
T Consensus       243 ~el~tg~~~~~~~~~~------~--~p~-----------------~~~~--~~~~~~~~~-~~~~~~~~----~~~~~~~  290 (337)
T 3mdy_A          243 WEVARRCVSGGIVEEY------Q--LPY-----------------HDLV--PSDPSYEDM-REIVCIKK----LRPSFPN  290 (337)
T ss_dssp             HHHHTTBCBTTBCCCC------C--CTT-----------------TTTS--CSSCCHHHH-HHHHTTSC----CCCCCCG
T ss_pred             HHHHhccCcccccccc------c--ccH-----------------hhhc--CCCCchhhh-HHHHhhhc----cCccccc
Confidence            9999996555321100      0  000                 0000  000111111 11110011    1111111


Q ss_pred             cc-cHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          156 RF-DEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       156 ~~-~~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      .. .......+.+++.+||+.||++|||+.+|+++|....
T Consensus       291 ~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~  330 (337)
T 3mdy_A          291 RWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMS  330 (337)
T ss_dssp             GGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred             cchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHH
Confidence            11 1256677899999999999999999999999998643

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.89  E-value=4.6e-24  Score=177.08  Aligned_cols=136  Identities=21%  Similarity=0.193  Sum_probs=100.7

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhh---hCCCCCCcccHhHHHHHHHHHhCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIS---TGRVSKELDVFSFRVVALEIATGR   82 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~s~G~vl~el~~g~   82 (231)
                      .||||||+|||++.++.+||+|||++......     ....|+..|+|||++.   ...++.++||||+|+++++|++|.
T Consensus       176 vH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~  250 (348)
T 1u5q_A          176 IHRDVKAGNILLSEPGLVKLGDFGSASIMAPA-----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERK  250 (348)
T ss_dssp             BCCCCSGGGEEEETTTEEEECCCTTCBSSSSB-----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSS
T ss_pred             eeCCCCHHHEEECCCCCEEEeeccCceecCCC-----CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCC
Confidence            59999999999999999999999999765432     2357899999999985   456889999999999999999999


Q ss_pred             CccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           83 KVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        83 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      .||.......                                          .+.......      .+....   ....
T Consensus       251 ~p~~~~~~~~------------------------------------------~~~~~~~~~------~~~~~~---~~~~  279 (348)
T 1u5q_A          251 PPLFNMNAMS------------------------------------------ALYHIAQNE------SPALQS---GHWS  279 (348)
T ss_dssp             CTTTTSCHHH------------------------------------------HHHHHHHSC------CCCCCC---TTSC
T ss_pred             CCCCCCChHH------------------------------------------HHHHHHhcC------CCCCCC---CCCC
Confidence            9996543211                                          111111000      000100   1112


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCCC
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTMP  197 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~~  197 (231)
                      ..+.+++.+||+.||++|||+.++++|+++....+
T Consensus       280 ~~l~~li~~~l~~dP~~Rps~~~ll~h~~~~~~~~  314 (348)
T 1u5q_A          280 EYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERP  314 (348)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHSCCC
T ss_pred             HHHHHHHHHHcccChhhCcCHHHHhhChhhhccCC
Confidence            34678899999999999999999999999866443

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.89  E-value=3.5e-24  Score=183.68  Aligned_cols=137  Identities=20%  Similarity=0.175  Sum_probs=101.2

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~p   84 (231)
                      .||||||+|||++.++.+||+|||+++..............++..|+|||++....++.++||||||+++||+++ |..|
T Consensus       306 vHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P  385 (454)
T 1qcf_A          306 IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIP  385 (454)
T ss_dssp             CCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCS
T ss_pred             cCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCC
Confidence            599999999999999999999999998754321111122345678999999988889999999999999999999 9999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |......+                                       +...+..             ..+...+......
T Consensus       386 ~~~~~~~~---------------------------------------~~~~i~~-------------~~~~~~~~~~~~~  413 (454)
T 1qcf_A          386 YPGMSNPE---------------------------------------VIRALER-------------GYRMPRPENCPEE  413 (454)
T ss_dssp             STTCCHHH---------------------------------------HHHHHHH-------------TCCCCCCTTSCHH
T ss_pred             CCCCCHHH---------------------------------------HHHHHHc-------------CCCCCCCCCCCHH
Confidence            97543221                                       1111100             0111111223346


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      +.+++.+||+.||++|||+.+|++.|+...
T Consensus       414 l~~li~~cl~~dp~~RPt~~~i~~~L~~~~  443 (454)
T 1qcf_A          414 LYNIMMRCWKNRPEERPTFEYIQSVLDDFY  443 (454)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred             HHHHHHHHccCChhHCcCHHHHHHHHHHHH
Confidence            788999999999999999999999998754

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.89  E-value=9.9e-24  Score=177.76  Aligned_cols=144  Identities=18%  Similarity=0.137  Sum_probs=102.5

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+|||++.++.+||+|||+++.... ........+||+.|+|||++.+..++.++|+||+||++++|++|..||
T Consensus       175 vHrDLKp~NILl~~~g~ikL~DFGla~~~~~-~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf  253 (396)
T 4dc2_A          175 IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR-PGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF  253 (396)
T ss_dssp             BCCCCCGGGEEECTTSCEEECCCTTCBCCCC-TTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred             EeccCCHHHEEECCCCCEEEeecceeeeccc-CCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCC
Confidence            5999999999999999999999999975322 122244568999999999998888999999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      .......                                  .........+.+......      ..    ++......+
T Consensus       254 ~~~~~~~----------------------------------~~~~~~~~~~~~~i~~~~------~~----~p~~~s~~~  289 (396)
T 4dc2_A          254 DIVGSSD----------------------------------NPDQNTEDYLFQVILEKQ------IR----IPRSLSVKA  289 (396)
T ss_dssp             TTTTC----------------------------------------CCHHHHHHHHHHCC------CC----CCTTSCHHH
T ss_pred             ccccccc----------------------------------ccchhhHHHHHHHHhccc------cC----CCCcCCHHH
Confidence            6432100                                  000011111111111110      11    111223456


Q ss_pred             HHHHHhhcCCCCCCCCCH------HHHHHHHhccc
Q 045790          166 LIVGLWCAHPDRCFRPSI------RQAIQVLNFET  194 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps~------~ell~~l~~~~  194 (231)
                      ..|+.+||+.||.+||++      .||++|++|..
T Consensus       290 ~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff~~  324 (396)
T 4dc2_A          290 ASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN  324 (396)
T ss_dssp             HHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTTTT
T ss_pred             HHHHHHHhcCCHhHcCCCCCCCCHHHHhcCccccC
Confidence            789999999999999985      89999999964

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.89  E-value=7.2e-24  Score=177.57  Aligned_cols=127  Identities=11%  Similarity=-0.081  Sum_probs=95.9

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhC-----------CCCCCcccHhHHHH
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTG-----------RVSKELDVFSFRVV   74 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-----------~~~~~~Dv~s~G~v   74 (231)
                      +||||||+|||++.++.+||+|||+++....    ......| ..|+|||++.+.           .++.++||||+||+
T Consensus       228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~i  302 (377)
T 3byv_A          228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLV  302 (377)
T ss_dssp             ECSCCCGGGEEECTTCCEEECCGGGCEETTC----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHH
T ss_pred             ecCCCCHHHEEEcCCCCEEEEechhheecCC----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHH
Confidence            5999999999999999999999999986432    2344567 899999999877           78999999999999


Q ss_pred             HHHHHhCCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhccccc
Q 045790           75 ALEIATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLD  154 (231)
Q Consensus        75 l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  154 (231)
                      +|+|++|+.||...........+                                                   .. .. 
T Consensus       303 l~elltg~~Pf~~~~~~~~~~~~---------------------------------------------------~~-~~-  329 (377)
T 3byv_A          303 IYWIWCADLPITKDAALGGSEWI---------------------------------------------------FR-SC-  329 (377)
T ss_dssp             HHHHHHSSCCC------CCSGGG---------------------------------------------------GS-SC-
T ss_pred             HHHHHHCCCCCcccccccchhhh---------------------------------------------------hh-hc-
Confidence            99999999999654321000000                                                   00 00 


Q ss_pred             CcccHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          155 SRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       155 ~~~~~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      ...    ...+.+++.+||+.||++|||+.++++|+++..
T Consensus       330 ~~~----~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~  365 (377)
T 3byv_A          330 KNI----PQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQ  365 (377)
T ss_dssp             CCC----CHHHHHHHHHHTCSSGGGCCCHHHHHTSHHHHH
T ss_pred             cCC----CHHHHHHHHHHcCCCchhCCCHHHHhhChHHHH
Confidence            111    234678999999999999999999999998753

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.89  E-value=7.1e-24  Score=174.29  Aligned_cols=140  Identities=12%  Similarity=0.033  Sum_probs=100.4

Q ss_pred             eecCCCCCCeeeCC---CCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCC
Q 045790            6 YSRSPELPPGRGDF---NFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGR   82 (231)
Q Consensus         6 ~~rdlk~~nil~~~---~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~   82 (231)
                      .||||||+||+++.   ++.+||+|||+++......  ......|++.|+|||++.+..++.++||||+|+++++|++|.
T Consensus       153 vH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~  230 (327)
T 3lm5_A          153 VHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHAC--ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHT  230 (327)
T ss_dssp             ECSCCCGGGEEESCBTTBCCEEECCGGGCEEC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred             ecCcCChHHEEEecCCCCCcEEEeeCccccccCCcc--ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCC
Confidence            59999999999997   7899999999998764321  223457899999999998888999999999999999999999


Q ss_pred             CccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           83 KVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        83 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      .||...........+....                                                 ............
T Consensus       231 ~pf~~~~~~~~~~~i~~~~-------------------------------------------------~~~~~~~~~~~~  261 (327)
T 3lm5_A          231 SPFVGEDNQETYLNISQVN-------------------------------------------------VDYSEETFSSVS  261 (327)
T ss_dssp             CSSCCSSHHHHHHHHHHTC-------------------------------------------------CCCCTTTTTTSC
T ss_pred             CCCCCCCchHHHHHHHhcc-------------------------------------------------cccCchhhcccC
Confidence            9997544321111111000                                                 000000001122


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                      ..+.+++..||+.||++|||+.++++|+++....
T Consensus       262 ~~~~~li~~~L~~dP~~Rpt~~~ll~h~~~~~~~  295 (327)
T 3lm5_A          262 QLATDFIQSLLVKNPEKRPTAEICLSHSWLQQWD  295 (327)
T ss_dssp             HHHHHHHHHHSCSSGGGSCCHHHHTTCGGGCCCC
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHhCCHhhcccc
Confidence            4467899999999999999999999999986543

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.89  E-value=4.5e-24  Score=178.35  Aligned_cols=164  Identities=17%  Similarity=0.086  Sum_probs=99.2

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhh-CCCCCCcccHhHHHHHHHHHhCCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIST-GRVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      .||||||+||+++.++.+||+|||+++.....    .....|+..|+|||++.+ ..++.++||||+||++++|++|+.|
T Consensus       154 vH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~p  229 (367)
T 2fst_X          154 IHRDLKPSNLAVNEDCELKILDFGLARHTADE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL  229 (367)
T ss_dssp             CCCCCCGGGEEECTTCCEEECC-------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCS
T ss_pred             eeCCCCHhhEEECCCCCEEEeecccccccccc----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCC
Confidence            59999999999999999999999999765421    234578999999999876 5689999999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |...........+...........+...               .......+......... . .+ ..+..    .....
T Consensus       230 f~~~~~~~~l~~i~~~~g~p~~~~~~~~---------------~~~~~~~~~~~~~~~~~-~-~~-~~~~~----~~~~~  287 (367)
T 2fst_X          230 FPGTDHIDQLKLILRLVGTPGAELLKKI---------------SSESARNYIQSLTQMPK-M-NF-ANVFI----GANPL  287 (367)
T ss_dssp             CCCSSHHHHHHHHHHHHCSCCHHHHTTC---------------CCHHHHHHHHTSCCCCC-C-CH-HHHTT----TCCHH
T ss_pred             CCCCCHHHHHHHHHHHhCCCCHHHHHHh---------------hhHHHHHHHhccCCCCC-C-CH-HHHCC----CCCHH
Confidence            9876655444444332221111111000               00001111110000000 0 00 00000    11245


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhcccC
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNFETT  195 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~  195 (231)
                      +.+|+.+||+.||++|||+.|+++|+++...
T Consensus       288 ~~dLl~~mL~~dP~~R~t~~e~L~hp~~~~~  318 (367)
T 2fst_X          288 AVDLLEKMLVLDSDKRITAAQALAHAYFAQY  318 (367)
T ss_dssp             HHHHHHHHSCSSGGGSCCHHHHHTSGGGTTT
T ss_pred             HHHHHHHhCCCCcccCcCHHHHhcChhhhhc
Confidence            6789999999999999999999999999754

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.89  E-value=7e-24  Score=179.51  Aligned_cols=141  Identities=17%  Similarity=0.109  Sum_probs=102.2

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCC----CCCCcccHhHHHHHHHHHhC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGR----VSKELDVFSFRVVALEIATG   81 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~----~~~~~Dv~s~G~vl~el~~g   81 (231)
                      .||||||+|||++.++.+||+|||+++.............+||+.|+|||++.+..    ++.++|+||+||++|+|++|
T Consensus       190 vHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G  269 (410)
T 3v8s_A          190 IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG  269 (410)
T ss_dssp             ECCCCSGGGEEECTTSCEEECCCTTCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHS
T ss_pred             EeccCCHHHeeECCCCCEEEeccceeEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhC
Confidence            59999999999999999999999999876533222234568999999999997654    77899999999999999999


Q ss_pred             CCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHH
Q 045790           82 RKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQ  161 (231)
Q Consensus        82 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  161 (231)
                      ..||...........+                                          ......     .....  ....
T Consensus       270 ~~Pf~~~~~~~~~~~i------------------------------------------~~~~~~-----~~~p~--~~~~  300 (410)
T 3v8s_A          270 DTPFYADSLVGTYSKI------------------------------------------MNHKNS-----LTFPD--DNDI  300 (410)
T ss_dssp             SCTTCCSSHHHHHHHH------------------------------------------HTHHHH-----CCCCT--TCCC
T ss_pred             CCCCCCCChhhHHHHH------------------------------------------Hhcccc-----ccCCC--cccc
Confidence            9999754432111111                                          100000     00000  0011


Q ss_pred             HHHHHHHHHhhcCCCCCC--CCCHHHHHHHHhcccC
Q 045790          162 MTCLLIVGLWCAHPDRCF--RPSIRQAIQVLNFETT  195 (231)
Q Consensus       162 ~~~~~~l~~~c~~~dp~~--Rps~~ell~~l~~~~~  195 (231)
                      ...+.+|+.+||+.+|.+  |+++.||++|++|...
T Consensus       301 s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~f~~~  336 (410)
T 3v8s_A          301 SKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKND  336 (410)
T ss_dssp             CHHHHHHHHHHSSCGGGCTTSSCHHHHHTSGGGCCS
T ss_pred             cHHHHHHHHHHccChhhhCCCCCHHHHhcCccccCC
Confidence            234677889999988988  9999999999999653

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.89  E-value=3.6e-24  Score=176.81  Aligned_cols=130  Identities=17%  Similarity=0.124  Sum_probs=100.9

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCC-CCCcccHhHHHHHHHHHhCCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRV-SKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      .||||||+||+++.++.+||+|||++.......  ......|+..|+|||++.+..+ +.++||||+|++++++++|..|
T Consensus       152 vH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~p  229 (335)
T 3dls_A          152 IHRDIKDENIVIAEDFTIKLIDFGSAAYLERGK--LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENP  229 (335)
T ss_dssp             ECSCCSGGGEEECTTSCEEECCCTTCEECCTTC--CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCS
T ss_pred             EEeccCHHHEEEcCCCcEEEeecccceECCCCC--ceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCc
Confidence            599999999999999999999999998765332  2345678999999999987776 7789999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |......      .                                               .......  ..    ....
T Consensus       230 f~~~~~~------~-----------------------------------------------~~~~~~~--~~----~~~~  250 (335)
T 3dls_A          230 FCELEET------V-----------------------------------------------EAAIHPP--YL----VSKE  250 (335)
T ss_dssp             CSSGGGG------T-----------------------------------------------TTCCCCS--SC----CCHH
T ss_pred             hhhHHHH------H-----------------------------------------------hhccCCC--cc----cCHH
Confidence            9643210      0                                               0000000  00    1234


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                      +..++.+||+.||++|||+.+|++|+++....
T Consensus       251 l~~li~~~L~~dP~~Rps~~ell~hp~~~~~~  282 (335)
T 3dls_A          251 LMSLVSGLLQPVPERRTTLEKLVTDPWVTQPV  282 (335)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHCTTTTCCC
T ss_pred             HHHHHHHHccCChhhCcCHHHHhcCccccCCc
Confidence            67899999999999999999999999987644

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.89  E-value=3.7e-23  Score=169.30  Aligned_cols=161  Identities=17%  Similarity=0.155  Sum_probs=106.2

Q ss_pred             eecCCCCCCeee----CCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhh--------hCCCCCCcccHhHHH
Q 045790            6 YSRSPELPPGRG----DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIS--------TGRVSKELDVFSFRV   73 (231)
Q Consensus         6 ~~rdlk~~nil~----~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~--------~~~~~~~~Dv~s~G~   73 (231)
                      .||||||+||++    +.++.+||+|||+++......  ......|+..|+|||++.        +..++.++||||+||
T Consensus       134 vH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~  211 (319)
T 4euu_A          134 VHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE--QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGV  211 (319)
T ss_dssp             ECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCTTC--CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHH
T ss_pred             ecCCCCHHHEEEeccCCCCceEEEccCCCceecCCCC--ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHH
Confidence            599999999999    788889999999998765432  223456899999999986        456889999999999


Q ss_pred             HHHHHHhCCCccccchhh----hhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhh
Q 045790           74 VALEIATGRKVINRYKAQ----KLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAA  149 (231)
Q Consensus        74 vl~el~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (231)
                      ++|++++|..||......    .....+....+...........             ...   ..|          ..  
T Consensus       212 il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~-------------~~~---~~~----------~~--  263 (319)
T 4euu_A          212 TFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAE-------------NGP---IDW----------SG--  263 (319)
T ss_dssp             HHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCCEEEECST-------------TCC---EEE----------ES--
T ss_pred             HHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCcccchhhhccc-------------CCc---ccc----------Cc--
Confidence            999999999999743321    1111111111100000000000             000   000          00  


Q ss_pred             cccccCcccHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          150 NERLDSRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       150 ~~~l~~~~~~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                      .-.............+..++.+||+.||++|||+.|+++|+......
T Consensus       264 ~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~~~  310 (319)
T 4euu_A          264 DMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR  310 (319)
T ss_dssp             SCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHTC-
T ss_pred             cCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHhhc
Confidence            00111234456677788999999999999999999999999987644

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.89  E-value=4.4e-24  Score=175.51  Aligned_cols=140  Identities=25%  Similarity=0.259  Sum_probs=101.0

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCc--eeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPK--TIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GR   82 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~   82 (231)
                      .||||||+||+++.++.+||+|||+++.........  .....++..|+|||++.+..++.++||||+|++++++++ |.
T Consensus       173 vH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~  252 (325)
T 3kul_A          173 VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGE  252 (325)
T ss_dssp             ECSCCSGGGEEECTTCCEEECCCSSCEECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSC
T ss_pred             eCCCCCcceEEECCCCCEEECCCCcccccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCC
Confidence            599999999999999999999999998765432221  122345668999999988889999999999999999998 99


Q ss_pred             CccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           83 KVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        83 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      .||...........+.                                                    .......+....
T Consensus       253 ~p~~~~~~~~~~~~~~----------------------------------------------------~~~~~~~~~~~~  280 (325)
T 3kul_A          253 RPYWNMTNRDVISSVE----------------------------------------------------EGYRLPAPMGCP  280 (325)
T ss_dssp             CTTTTSCHHHHHHHHH----------------------------------------------------TTCCCCCCTTCC
T ss_pred             CCcccCCHHHHHHHHH----------------------------------------------------cCCCCCCCCCcC
Confidence            9996544321111110                                                    001111111223


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCCC
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTMP  197 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~~  197 (231)
                      ..+..++.+||+.||++|||+.+|++.|......+
T Consensus       281 ~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~  315 (325)
T 3kul_A          281 HALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSP  315 (325)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCc
Confidence            46788999999999999999999999998755433

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.89  E-value=4.4e-23  Score=167.72  Aligned_cols=150  Identities=28%  Similarity=0.378  Sum_probs=108.3

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCc-eeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCC
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPK-TIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRK   83 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~   83 (231)
                      -+||||||+||+++.++.+||+|||++.......... .....|+..|+|||.+.+ .++.++||||+|++++++++|..
T Consensus       154 i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~  232 (307)
T 2nru_A          154 HIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLP  232 (307)
T ss_dssp             EECSCCCGGGEEECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCC
T ss_pred             eecCCCCHHHEEEcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCC
Confidence            3599999999999999999999999987654322211 223468899999998854 57889999999999999999999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhc-chhhhhhcccccCcccHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGE-RKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~  162 (231)
                      ||......                                      ..+..+....... ..+...+++.+ ........
T Consensus       233 p~~~~~~~--------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  273 (307)
T 2nru_A          233 AVDEHREP--------------------------------------QLLLDIKEEIEDEEKTIEDYIDKKM-NDADSTSV  273 (307)
T ss_dssp             SBCTTBSS--------------------------------------SBTTHHHHHHHTTSCCHHHHSCSSC-SCCCHHHH
T ss_pred             CcccCcch--------------------------------------HHHHHHHHHhhhhhhhhhhhccccc-cccchHHH
Confidence            99754321                                      0111111111111 12223333333 33456677


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      ..+..++.+||+.||.+|||+.+|+++|....
T Consensus       274 ~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~  305 (307)
T 2nru_A          274 EAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT  305 (307)
T ss_dssp             HHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence            88999999999999999999999999998643

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.89  E-value=7.8e-24  Score=168.97  Aligned_cols=138  Identities=15%  Similarity=0.152  Sum_probs=100.6

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCC
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRK   83 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~   83 (231)
                      -.||||||+||+++.++.+||+|||++...............++..|+|||.+.+..++.++||||+|++++++++ |..
T Consensus       125 i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~  204 (268)
T 3sxs_A          125 FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKM  204 (268)
T ss_dssp             EEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCC
T ss_pred             eecCCcCcceEEECCCCCEEEccCccceecchhhhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCC
Confidence            3599999999999999999999999998764332222222345567999999988889999999999999999998 999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||...........+..                                          ..          ....+.....
T Consensus       205 p~~~~~~~~~~~~~~~------------------------------------------~~----------~~~~~~~~~~  232 (268)
T 3sxs_A          205 PYDLYTNSEVVLKVSQ------------------------------------------GH----------RLYRPHLASD  232 (268)
T ss_dssp             TTTTSCHHHHHHHHHT------------------------------------------TC----------CCCCCTTSCH
T ss_pred             CccccChHHHHHHHHc------------------------------------------CC----------CCCCCCcChH
Confidence            9975443211111100                                          00          0000011123


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      .+..++..||+.||++|||+.+++++|+...
T Consensus       233 ~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~  263 (268)
T 3sxs_A          233 TIYQIMYSCWHELPEKRPTFQQLLSSIEPLR  263 (268)
T ss_dssp             HHHHHHHHTTCSSGGGSCCHHHHHHHHGGGC
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence            5678999999999999999999999998754

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.89  E-value=8.5e-24  Score=173.34  Aligned_cols=136  Identities=22%  Similarity=0.213  Sum_probs=98.7

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCC-----------ceeEeeccccccchhhhhhCCCCCCcccHhHHH
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGP-----------KTIMLVGTLAYMASEYISTGRVSKELDVFSFRV   73 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~-----------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~   73 (231)
                      -+||||||.||+++.++.+||+|||+++........           ......|+..|+|||.+.+..++.++||||+|+
T Consensus       185 ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~  264 (332)
T 3qd2_B          185 LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGL  264 (332)
T ss_dssp             EECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSCHHHHHCCCCCTHHHHHHHHH
T ss_pred             eeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccChHHhcCCCCcchhhHHHHHH
Confidence            369999999999999999999999999876543211           112346899999999998888999999999999


Q ss_pred             HHHHHHhCCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccc
Q 045790           74 VALEIATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERL  153 (231)
Q Consensus        74 vl~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  153 (231)
                      +++++++|..++.....                                            ......         ....
T Consensus       265 il~el~~~~~~~~~~~~--------------------------------------------~~~~~~---------~~~~  291 (332)
T 3qd2_B          265 ILFELLYSFSTQMERVR--------------------------------------------IITDVR---------NLKF  291 (332)
T ss_dssp             HHHHHHSCCCCHHHHHH--------------------------------------------HHHHHH---------TTCC
T ss_pred             HHHHHHHcCCChhHHHH--------------------------------------------HHHHhh---------ccCC
Confidence            99999998877643211                                            000000         0000


Q ss_pred             cCcccHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          154 DSRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       154 ~~~~~~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                       ..........+..++.+||+.||++|||+.|+++|+++..
T Consensus       292 -~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~f~~  331 (332)
T 3qd2_B          292 -PLLFTQKYPQEHMMVQDMLSPSPTERPEATDIIENAIFEN  331 (332)
T ss_dssp             -CHHHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHHSTTCCC
T ss_pred             -CcccccCChhHHHHHHHHccCCCCcCCCHHHHhhchhhhc
Confidence             0011122344578999999999999999999999998864

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.89  E-value=1.9e-24  Score=183.62  Aligned_cols=158  Identities=14%  Similarity=0.083  Sum_probs=103.8

Q ss_pred             eecCCCCCCeeeCCC-CcEEEeccccccccCCCCCCceeEeeccccccchhhhhhC-CCCCCcccHhHHHHHHHHHhCCC
Q 045790            6 YSRSPELPPGRGDFN-FNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTG-RVSKELDVFSFRVVALEIATGRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~el~~g~~   83 (231)
                      .||||||+|||++.+ +.+||+|||+++.+....  ......|+..|+|||++.+. .++.++||||+||++++|++|+.
T Consensus       178 vHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~  255 (420)
T 1j1b_A          178 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP  255 (420)
T ss_dssp             ECSCCSGGGEEEETTTTEEEECCCTTCEECCTTC--CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSC
T ss_pred             cccCCChhhEEEeCCCCeEEeccchhhhhcccCC--CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCC
Confidence            599999999999954 678999999998764322  12345789999999998765 68999999999999999999999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhccccc-----Cccc
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLD-----SRFD  158 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-----~~~~  158 (231)
                      ||......+.+..+.........+.+.                           ...  .......-+.+.     ..+.
T Consensus       256 pf~~~~~~~~l~~i~~~lg~p~~~~~~---------------------------~~~--~~~~~~~~p~~~~~~~~~~~~  306 (420)
T 1j1b_A          256 IFPGDSGVDQLVEIIKVLGTPTREQIR---------------------------EMN--PNYTEFKFPQIKAHPWTKVFR  306 (420)
T ss_dssp             SSCCSSHHHHHHHHHHHHCSCCHHHHH---------------------------HHC--SCCCCCCCCCCCCCCHHHHSC
T ss_pred             CCCCCCHHHHHHHHHHHhCCCCHHHHH---------------------------hhC--hhhhhhccCccCCCCHHHhcC
Confidence            998765443333332211111100000                           000  000000000000     0001


Q ss_pred             HHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          159 EQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       159 ~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      ......+.+|+.+||+.||++|||+.|+++|+++..
T Consensus       307 ~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~  342 (420)
T 1j1b_A          307 PRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE  342 (420)
T ss_dssp             TTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGG
T ss_pred             CCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhcc
Confidence            111245788999999999999999999999999854

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.89  E-value=1e-23  Score=168.48  Aligned_cols=134  Identities=24%  Similarity=0.218  Sum_probs=93.6

Q ss_pred             eeecCCCCCCeeeCC--------CCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHH
Q 045790            5 AYSRSPELPPGRGDF--------NFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVAL   76 (231)
Q Consensus         5 ~~~rdlk~~nil~~~--------~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~   76 (231)
                      -+||||||+||+++.        ++.+||+|||++.......   .....|+..|+|||.+.+..++.++||||+|++++
T Consensus       129 i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~  205 (271)
T 3dtc_A          129 IIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTT---KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLW  205 (271)
T ss_dssp             CCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHH
T ss_pred             eeecCCchHHEEEecccccccccCcceEEccCCccccccccc---ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHH
Confidence            359999999999985        6789999999997654321   22457889999999998888999999999999999


Q ss_pred             HHHhCCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCc
Q 045790           77 EIATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSR  156 (231)
Q Consensus        77 el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  156 (231)
                      ++++|..||.............                                                   .......
T Consensus       206 ~l~~g~~p~~~~~~~~~~~~~~---------------------------------------------------~~~~~~~  234 (271)
T 3dtc_A          206 ELLTGEVPFRGIDGLAVAYGVA---------------------------------------------------MNKLALP  234 (271)
T ss_dssp             HHHHCCCTTTTSCHHHHHHHHH---------------------------------------------------TSCCCCC
T ss_pred             HHHhCCCCCCCCCHHHHHHhhh---------------------------------------------------cCCCCCC
Confidence            9999999997543221110000                                                   0011111


Q ss_pred             ccHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          157 FDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       157 ~~~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      .+......+.+++.+||+.||++|||+.|++++|..
T Consensus       235 ~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~  270 (271)
T 3dtc_A          235 IPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTT  270 (271)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC
T ss_pred             CCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhc
Confidence            112223457889999999999999999999999964

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.89  E-value=6.7e-24  Score=175.29  Aligned_cols=139  Identities=18%  Similarity=0.124  Sum_probs=102.0

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCc-eeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPK-TIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~   83 (231)
                      .||||||+||+++.++.+||+|||++.......... .....++..|+|||.+.+..++.++||||+|+++++|++ |..
T Consensus       194 vH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~  273 (344)
T 1rjb_A          194 VHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVN  273 (344)
T ss_dssp             EETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCC
T ss_pred             ccCCCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCC
Confidence            599999999999999999999999997664332221 233456788999999988889999999999999999998 999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||......                                      ..+...+.             .......+.....
T Consensus       274 p~~~~~~~--------------------------------------~~~~~~~~-------------~~~~~~~~~~~~~  302 (344)
T 1rjb_A          274 PYPGIPVD--------------------------------------ANFYKLIQ-------------NGFKMDQPFYATE  302 (344)
T ss_dssp             SSTTCCCS--------------------------------------HHHHHHHH-------------TTCCCCCCTTCCH
T ss_pred             CcccCCcH--------------------------------------HHHHHHHh-------------cCCCCCCCCCCCH
Confidence            99653211                                      01111110             0011111112234


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhcccC
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNFETT  195 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~  195 (231)
                      .+..++.+||+.||.+|||+.+|+++|.....
T Consensus       303 ~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~  334 (344)
T 1rjb_A          303 EIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLA  334 (344)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHcCCCchhCcCHHHHHHHHHHHHH
Confidence            57889999999999999999999999987543

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.89  E-value=3e-24  Score=176.66  Aligned_cols=139  Identities=20%  Similarity=0.134  Sum_probs=96.2

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCC-ceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGP-KTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~   83 (231)
                      .||||||+||+++.++.+||+|||+++........ ......++..|+|||.+.+..++.++||||+|++++++++ |..
T Consensus       139 vH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~  218 (327)
T 3lzb_A          139 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK  218 (327)
T ss_dssp             CCSCCCGGGEEEEETTEEEECCTTC----------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred             cCCCCCHHHEEEcCCCCEEEccCcceeEccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCC
Confidence            59999999999999999999999999876432221 1233456778999999998889999999999999999999 999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||.......                                       +...+.             .......+.....
T Consensus       219 p~~~~~~~~---------------------------------------~~~~~~-------------~~~~~~~~~~~~~  246 (327)
T 3lzb_A          219 PYDGIPASE---------------------------------------ISSILE-------------KGERLPQPPICTI  246 (327)
T ss_dssp             TTTTCCGGG---------------------------------------HHHHHH-------------TTCCCCCCTTBCH
T ss_pred             CCCCCCHHH---------------------------------------HHHHHH-------------cCCCCCCCccCCH
Confidence            997543221                                       111110             0000111112233


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                      .+..++.+||+.||++|||+.||++.|......
T Consensus       247 ~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~  279 (327)
T 3lzb_A          247 DVYMIMRKCWMIDADSRPKFRELIIEFSKMARD  279 (327)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence            577899999999999999999999999876543

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.89  E-value=8.9e-24  Score=173.44  Aligned_cols=140  Identities=14%  Similarity=0.036  Sum_probs=104.1

Q ss_pred             eecCCCCCCeeeCC--CCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCC
Q 045790            6 YSRSPELPPGRGDF--NFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~--~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~   83 (231)
                      .||||||+||+++.  ++.+||+|||++......  .......|++.|+|||++.+..++.++||||+|+++++|++|..
T Consensus       124 vH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~  201 (321)
T 1tki_A          124 GHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG--DNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGIN  201 (321)
T ss_dssp             ECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT--CEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSC
T ss_pred             CcCCCCHHHEEEccCCCCCEEEEECCCCeECCCC--CccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCC
Confidence            59999999999987  789999999999876532  23455678999999999987778899999999999999999999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||...........+......                                             .+.....    ....
T Consensus       202 pf~~~~~~~~~~~i~~~~~~---------------------------------------------~~~~~~~----~~s~  232 (321)
T 1tki_A          202 PFLAETNQQIIENIMNAEYT---------------------------------------------FDEEAFK----EISI  232 (321)
T ss_dssp             TTCCSSHHHHHHHHHHTCCC---------------------------------------------CCHHHHT----TSCH
T ss_pred             CCcCCCHHHHHHHHHcCCCC---------------------------------------------CChhhhc----cCCH
Confidence            99765432211111110000                                             0000000    1123


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                      .+.+++.+||+.||++|||+.|+++|+++....
T Consensus       233 ~~~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~~  265 (321)
T 1tki_A          233 EAMDFVDRLLVKERKSRMTASEALQHPWLKQKI  265 (321)
T ss_dssp             HHHHHHHTTSCSSGGGSCCHHHHHHSHHHHSCG
T ss_pred             HHHHHHHHHcCCChhHCcCHHHHhcChhhccCc
Confidence            567899999999999999999999999996654

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.89  E-value=5.6e-24  Score=178.90  Aligned_cols=144  Identities=13%  Similarity=0.024  Sum_probs=105.3

Q ss_pred             eecCCCCCCeeeCC--CCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCC
Q 045790            6 YSRSPELPPGRGDF--NFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~--~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~   83 (231)
                      .||||||+|||++.  ++.+||+|||++......  .......|+..|+|||++.+..++.++||||+||++++|++|..
T Consensus       171 vHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~  248 (387)
T 1kob_A          171 VHLDIKPENIMCETKKASSVKIIDFGLATKLNPD--EIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLS  248 (387)
T ss_dssp             ECCCCCGGGEEESSTTCCCEEECCCTTCEECCTT--SCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCC
T ss_pred             eecccchHHeEEecCCCCceEEEecccceecCCC--cceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCC
Confidence            59999999999974  467999999999876532  22345679999999999988889999999999999999999999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||...........+.....                                             ..++....    ....
T Consensus       249 Pf~~~~~~~~~~~i~~~~~---------------------------------------------~~~~~~~~----~~s~  279 (387)
T 1kob_A          249 PFAGEDDLETLQNVKRCDW---------------------------------------------EFDEDAFS----SVSP  279 (387)
T ss_dssp             SSCCSSHHHHHHHHHHCCC---------------------------------------------CCCSSTTT----TSCH
T ss_pred             CCCCCCHHHHHHHHHhCCC---------------------------------------------CCCccccc----cCCH
Confidence            9976442211111110000                                             00000001    1123


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCCCCCC
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTMPNLP  200 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~~~~~  200 (231)
                      .+.+++.+||+.||++|||+.++++|+++........
T Consensus       280 ~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~~~~  316 (387)
T 1kob_A          280 EAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDHSNLT  316 (387)
T ss_dssp             HHHHHHHTTSCSSGGGSCCHHHHHTSTTTSSCCTTCC
T ss_pred             HHHHHHHHHcCCChhHCcCHHHHhhCccccCCccccc
Confidence            5678999999999999999999999999977654433

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.89  E-value=9.4e-24  Score=177.19  Aligned_cols=137  Identities=23%  Similarity=0.159  Sum_probs=101.7

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCC-CceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELG-PKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~   83 (231)
                      .||||||+|||++.++.+||+|||+++....... .......++..|+|||++.+..++.++||||+|++++++++ |..
T Consensus       213 vH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~  292 (382)
T 3tt0_A          213 IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGS  292 (382)
T ss_dssp             CCSCCCGGGEEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred             ecCCCCcceEEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCC
Confidence            5999999999999999999999999986643221 11223456788999999988889999999999999999999 999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||...........+                                          .          .......+.....
T Consensus       293 p~~~~~~~~~~~~~------------------------------------------~----------~~~~~~~~~~~~~  320 (382)
T 3tt0_A          293 PYPGVPVEELFKLL------------------------------------------K----------EGHRMDKPSNCTN  320 (382)
T ss_dssp             SSTTCCHHHHHHHH------------------------------------------H----------TTCCCCCCSSCCH
T ss_pred             CCCCCCHHHHHHHH------------------------------------------H----------cCCCCCCCccCCH
Confidence            99654322111111                                          0          0000111112234


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      .+..++.+||+.||++|||+.+|+++|....
T Consensus       321 ~l~~li~~~l~~dP~~Rps~~ell~~L~~~~  351 (382)
T 3tt0_A          321 ELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV  351 (382)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            5788999999999999999999999998754

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.89  E-value=5e-24  Score=178.39  Aligned_cols=137  Identities=20%  Similarity=0.243  Sum_probs=90.5

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCc--eeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPK--TIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GR   82 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~   82 (231)
                      +||||||+|||++.++.+||+|||+++.........  .....++..|+|||++.+..++.++||||+|+++|++++ |.
T Consensus       169 vH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~  248 (373)
T 2qol_A          169 VHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE  248 (373)
T ss_dssp             CCSCCCGGGEEECTTCCEEECCC----------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-
T ss_pred             eCCCCCcceEEEcCCCCEEECcCccccccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCC
Confidence            599999999999999999999999998765322211  122234668999999988889999999999999999997 99


Q ss_pred             CccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           83 KVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        83 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      .||.......                                       +..   ..          ........+....
T Consensus       249 ~P~~~~~~~~---------------------------------------~~~---~i----------~~~~~~~~~~~~~  276 (373)
T 2qol_A          249 RPYWEMSNQD---------------------------------------VIK---AV----------DEGYRLPPPMDCP  276 (373)
T ss_dssp             CTTTTCCHHH---------------------------------------HHH---HH----------HTTEECCCCTTCB
T ss_pred             CCCCCCCHHH---------------------------------------HHH---HH----------HcCCCCCCCcccc
Confidence            9996543221                                       111   00          0111111112233


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      ..+..++.+||+.||++||++.+|++.|....
T Consensus       277 ~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~  308 (373)
T 2qol_A          277 AALYQLMLDCWQKDRNNRPKFEQIVSILDKLI  308 (373)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCcChhhCcCHHHHHHHHHHHH
Confidence            56788999999999999999999999988743

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.89  E-value=8.8e-24  Score=180.21  Aligned_cols=141  Identities=16%  Similarity=0.090  Sum_probs=101.2

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhh-----hCCCCCCcccHhHHHHHHHHHh
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIS-----TGRVSKELDVFSFRVVALEIAT   80 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~Dv~s~G~vl~el~~   80 (231)
                      .||||||+|||++.++.+||+|||+++.............+||+.|+|||++.     ...++.++||||+||++|||++
T Consensus       197 iHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~ellt  276 (437)
T 4aw2_A          197 VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLY  276 (437)
T ss_dssp             ECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHH
T ss_pred             EecccCHHHeeEcCCCCEEEcchhhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHh
Confidence            59999999999999999999999999776543322233467999999999986     3458899999999999999999


Q ss_pred             CCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHH
Q 045790           81 GRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQ  160 (231)
Q Consensus        81 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  160 (231)
                      |+.||......+....+.                                          ....  ...-+....    .
T Consensus       277 G~~Pf~~~~~~~~~~~i~------------------------------------------~~~~--~~~~p~~~~----~  308 (437)
T 4aw2_A          277 GETPFYAESLVETYGKIM------------------------------------------NHKE--RFQFPTQVT----D  308 (437)
T ss_dssp             SSCTTCCSSHHHHHHHHH------------------------------------------THHH--HCCCCSSCC----C
T ss_pred             CCCCCCCCChhHHHHhhh------------------------------------------hccc--cccCCcccc----c
Confidence            999997654321111111                                          0000  000011001    1


Q ss_pred             HHHHHHHHHHhhcCCCCCC--CCCHHHHHHHHhccc
Q 045790          161 QMTCLLIVGLWCAHPDRCF--RPSIRQAIQVLNFET  194 (231)
Q Consensus       161 ~~~~~~~l~~~c~~~dp~~--Rps~~ell~~l~~~~  194 (231)
                      ....+.+|+.+||..+|++  |+++.|+++|++|..
T Consensus       309 ~s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hpff~~  344 (437)
T 4aw2_A          309 VSENAKDLIRRLICSREHRLGQNGIEDFKKHPFFSG  344 (437)
T ss_dssp             SCHHHHHHHHTTSSCGGGCTTTTTTHHHHTSGGGTT
T ss_pred             CCHHHHHHHHHHhcccccccCCCCHHHHhCCCccCC
Confidence            1234567888899888888  999999999999964

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.89  E-value=3.7e-24  Score=178.81  Aligned_cols=139  Identities=18%  Similarity=0.109  Sum_probs=100.5

Q ss_pred             eecCCCCCCeeeCCCC---cEEEeccccccccCCC-CCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-
Q 045790            6 YSRSPELPPGRGDFNF---NAKLGDFGLARLMDHE-LGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-   80 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~---~~kl~Dfg~~~~~~~~-~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-   80 (231)
                      .||||||+|||++.++   .+||+|||+++..... .........++..|+|||++.+..++.++||||+||++++|++ 
T Consensus       203 vHrDlkp~NIll~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~  282 (367)
T 3l9p_A          203 IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL  282 (367)
T ss_dssp             CCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTT
T ss_pred             eCCCCChhhEEEecCCCCceEEECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhC
Confidence            5999999999999544   5999999999754321 1112233467889999999988899999999999999999998 


Q ss_pred             CCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHH
Q 045790           81 GRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQ  160 (231)
Q Consensus        81 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  160 (231)
                      |..||...........+                                          ...          .....+..
T Consensus       283 g~~pf~~~~~~~~~~~i------------------------------------------~~~----------~~~~~~~~  310 (367)
T 3l9p_A          283 GYMPYPSKSNQEVLEFV------------------------------------------TSG----------GRMDPPKN  310 (367)
T ss_dssp             SCCSSTTCCHHHHHHHH------------------------------------------HTT----------CCCCCCTT
T ss_pred             CCCCCCCCCHHHHHHHH------------------------------------------HcC----------CCCCCCcc
Confidence            99999754422111111                                          100          00011112


Q ss_pred             HHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          161 QMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       161 ~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                      ....+.+++.+||+.||++|||+.+|+++|++....
T Consensus       311 ~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~  346 (367)
T 3l9p_A          311 CPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD  346 (367)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             CCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhC
Confidence            234577899999999999999999999999885543

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.89  E-value=1.5e-23  Score=169.33  Aligned_cols=142  Identities=16%  Similarity=0.017  Sum_probs=101.4

Q ss_pred             eecCCCCCCeee---CCCCcEEEeccccccccCCCCCC------ceeEeeccccccchhhhhhCCCCCCcccHhHHHHHH
Q 045790            6 YSRSPELPPGRG---DFNFNAKLGDFGLARLMDHELGP------KTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVAL   76 (231)
Q Consensus         6 ~~rdlk~~nil~---~~~~~~kl~Dfg~~~~~~~~~~~------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~   76 (231)
                      .||||||+||++   +.++.+||+|||++.........      ......|+..|+|||.+.+..++.++||||+|++++
T Consensus       127 vH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~  206 (296)
T 4hgt_A          127 IHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLM  206 (296)
T ss_dssp             ECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHH
T ss_pred             ecCCCCHHHeeeeccCCCCeEEEecCccceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHH
Confidence            599999999999   78899999999999876543221      123457899999999998888999999999999999


Q ss_pred             HHHhCCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCc
Q 045790           77 EIATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSR  156 (231)
Q Consensus        77 el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  156 (231)
                      ++++|..||......                                   .....+..........  ..    +.+...
T Consensus       207 ~l~~g~~pf~~~~~~-----------------------------------~~~~~~~~~~~~~~~~--~~----~~~~~~  245 (296)
T 4hgt_A          207 YFNLGSLPWQGLKAA-----------------------------------TKRQKYERISEKKMST--PI----EVLCKG  245 (296)
T ss_dssp             HHHHSSCTTSSCCCS-----------------------------------SSSSHHHHHHHHHHHS--CH----HHHTTT
T ss_pred             HHhcCCCCCcccchh-----------------------------------hhhhhhhhhhcccccc--hh----hhhhcc
Confidence            999999999753311                                   1111111111111000  00    001011


Q ss_pred             ccHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          157 FDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       157 ~~~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      +    ...+.+++.+||+.||++|||+.+|++.|..
T Consensus       246 ~----~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~  277 (296)
T 4hgt_A          246 Y----PSEFATYLNFCRSLRFDDKPDYSYLRQLFRN  277 (296)
T ss_dssp             S----CHHHHHHHHHHHTSCTTCCCCHHHHHHHHHH
T ss_pred             C----CHHHHHHHHHHHhcCCCCCCCHHHHHHHHHH
Confidence            1    2457889999999999999999999998876

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.89  E-value=2.2e-23  Score=169.75  Aligned_cols=161  Identities=17%  Similarity=0.042  Sum_probs=99.8

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhh-CCCCCCcccHhHHHHHHHHHhCCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIST-GRVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      .||||||+||+++.++.+||+|||++....... .......|+..|+|||++.+ ..++.++||||+|++++++++|..|
T Consensus       124 vH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p  202 (311)
T 4agu_A          124 IHRDVKPENILITKHSVIKLCDFGFARLLTGPS-DYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPL  202 (311)
T ss_dssp             ECCCCSGGGEEECTTSCEEECCCTTCEECC-------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             cCCCCChhhEEEcCCCCEEEeeCCCchhccCcc-cccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCC
Confidence            599999999999999999999999998764322 12234578899999999976 5579999999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhh---hhcccccCcc---c
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLS---AANERLDSRF---D  158 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~---~  158 (231)
                      |......+....+.........                            .............   ..++......   .
T Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (311)
T 4agu_A          203 WPGKSDVDQLYLIRKTLGDLIP----------------------------RHQQVFSTNQYFSGVKIPDPEDMEPLELKF  254 (311)
T ss_dssp             CCCSSHHHHHHHHHHHHCSCCH----------------------------HHHHHHHTCGGGTTCCCCCCSSCCCHHHHC
T ss_pred             CCCCCHHHHHHHHHHHhccccc----------------------------ccccccccccccccCcCCCccccchhhhhc
Confidence            9765543322222111000000                            0000000000000   0000000000   0


Q ss_pred             HHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccC
Q 045790          159 EQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETT  195 (231)
Q Consensus       159 ~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~  195 (231)
                      ......+.+++.+||+.||++|||+.||++|+++...
T Consensus       255 ~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~  291 (311)
T 4agu_A          255 PNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENI  291 (311)
T ss_dssp             TTCCHHHHHHHHHHCCSSTTTSCCHHHHHTSGGGTTC
T ss_pred             ccccHHHHHHHHHHccCChhhcCCHHHHhcChHHHhc
Confidence            0112346789999999999999999999999999764

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.88  E-value=9.5e-25  Score=185.12  Aligned_cols=125  Identities=9%  Similarity=-0.114  Sum_probs=94.5

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhh----------hCCCCCCcccHhHHHHH
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIS----------TGRVSKELDVFSFRVVA   75 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~----------~~~~~~~~Dv~s~G~vl   75 (231)
                      .||||||+|||++.++.+||+|||+++.....    ....+| ..|+|||++.          ...++.++||||+||++
T Consensus       233 iHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil  307 (413)
T 3dzo_A          233 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAI  307 (413)
T ss_dssp             ECSCCCGGGEEECTTCCEEECCGGGCEETTEE----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHH
T ss_pred             ccCCcccceEEEecCCeEEEEeccceeecCCc----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHH
Confidence            59999999999999999999999998765432    334567 8999999983          33477899999999999


Q ss_pred             HHHHhCCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccC
Q 045790           76 LEIATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDS  155 (231)
Q Consensus        76 ~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  155 (231)
                      |+|++|+.||..........                                                   .++...  .
T Consensus       308 ~elltg~~Pf~~~~~~~~~~---------------------------------------------------~~~~~~--~  334 (413)
T 3dzo_A          308 YWIWCADLPNTDDAALGGSE---------------------------------------------------WIFRSC--K  334 (413)
T ss_dssp             HHHHHSSCCCCTTGGGSCSG---------------------------------------------------GGGSSC--C
T ss_pred             HHHHHCCCCCCCcchhhhHH---------------------------------------------------HHHhhc--c
Confidence            99999999997544210000                                                   000000  0


Q ss_pred             cccHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          156 RFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       156 ~~~~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      ..+    ..+..++.+||+.||++|||+.++++|+++
T Consensus       335 ~~~----~~~~~li~~~l~~dP~~Rpt~~~~l~~~~~  367 (413)
T 3dzo_A          335 NIP----QPVRALLEGFLRYPKEDRLLPLQAMETPEY  367 (413)
T ss_dssp             CCC----HHHHHHHHHHTCSSGGGSCCHHHHTTSHHH
T ss_pred             cCC----HHHHHHHHHHccCChhhCcCHHHHHhCHHH
Confidence            111    457789999999999999999999888766

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.88  E-value=1.2e-23  Score=175.28  Aligned_cols=169  Identities=17%  Similarity=0.100  Sum_probs=107.4

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCc--eeEeeccccccchhhhhhC-CCCCCcccHhHHHHHHHHHhCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPK--TIMLVGTLAYMASEYISTG-RVSKELDVFSFRVVALEIATGR   82 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~el~~g~   82 (231)
                      .||||||+||+++.++.+||+|||++..........  .....|+..|+|||++.+. .++.++||||+|+++++|++|.
T Consensus       150 vH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~  229 (364)
T 3qyz_A          150 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR  229 (364)
T ss_dssp             ECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSS
T ss_pred             ecCCCChHhEEECCCCCEEEEeCcceEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCC
Confidence            599999999999999999999999998664322111  2345789999999987654 4899999999999999999999


Q ss_pred             CccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           83 KVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        83 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      .||......+....+...........+..               ........+.........   .....+..    ...
T Consensus       230 ~pf~~~~~~~~~~~i~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~---~~~~~~~~----~~~  287 (364)
T 3qyz_A          230 PIFPGKHYLDQLNHILGILGSPSQEDLNC---------------IINLKARNYLLSLPHKNK---VPWNRLFP----NAD  287 (364)
T ss_dssp             CSSCCSSGGGHHHHHHHHHCSCCHHHHHT---------------CCCHHHHHHHHTSCCCCC---CCHHHHCT----TSC
T ss_pred             CCCCCCChHHHHHHHHHHhCCCCHHHHHH---------------hhhhhHHHHHHhcCCccC---CCHHHhCC----CCC
Confidence            99987654433333322111111000000               000000000000000000   00000001    112


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                      ..+.+|+.+||+.||++|||+.|+++|+++....
T Consensus       288 ~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  321 (364)
T 3qyz_A          288 SKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY  321 (364)
T ss_dssp             HHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTTC
T ss_pred             HHHHHHHHHHcCCChhhCCCHHHHhcCcchhhcc
Confidence            4568899999999999999999999999997754

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.88  E-value=2.7e-24  Score=176.98  Aligned_cols=167  Identities=16%  Similarity=0.015  Sum_probs=101.0

Q ss_pred             eecCCCCCCeee-----CCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCC-CCCCcccHhHHHHHHHHH
Q 045790            6 YSRSPELPPGRG-----DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGR-VSKELDVFSFRVVALEIA   79 (231)
Q Consensus         6 ~~rdlk~~nil~-----~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~-~~~~~Dv~s~G~vl~el~   79 (231)
                      .||||||+|||+     +.++.+||+|||++....... .......|+..|+|||++.+.. ++.++||||+||++++++
T Consensus       154 vH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell  232 (329)
T 3gbz_A          154 LHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPI-RQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEML  232 (329)
T ss_dssp             CCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHH
T ss_pred             ECCCCCHHHEEEecCCCCccceEEECcCCCccccCCcc-cccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHH
Confidence            599999999999     455669999999998764321 1223456799999999997754 899999999999999999


Q ss_pred             hCCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccH
Q 045790           80 TGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDE  159 (231)
Q Consensus        80 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  159 (231)
                      +|..||......+....+...........+.......  .+...........             .......        
T Consensus       233 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-------------~~~~~~~--------  289 (329)
T 3gbz_A          233 MKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALP--DWKQSFPKFRGKT-------------LKRVLGA--------  289 (329)
T ss_dssp             HSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGGST--TCCTTCCCCCCCC-------------HHHHHGG--------
T ss_pred             HCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhhhh--hhhhhhhhhcccc-------------Hhhhccc--------
Confidence            9999998766544444433221111111110000000  0000000000000             0000000        


Q ss_pred             HHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          160 QQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       160 ~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                      .....+.+|+.+||+.||++|||+.|+++|+++....
T Consensus       290 ~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~  326 (329)
T 3gbz_A          290 LLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSHND  326 (329)
T ss_dssp             GSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSSC
T ss_pred             ccCHHHHHHHHHHccCChhhCCCHHHHhCCcccCCCC
Confidence            0123567899999999999999999999999997643

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.88  E-value=1e-23  Score=169.53  Aligned_cols=136  Identities=21%  Similarity=0.195  Sum_probs=97.2

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~p   84 (231)
                      +||||||+||+++.++.+||+|||++...............++..|+|||.+.+..++.++||||+|++++++++ |..|
T Consensus       135 ~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p  214 (281)
T 3cc6_A          135 VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQP  214 (281)
T ss_dssp             CCCCCSGGGEEEEETTEEEECCCCGGGCC---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCT
T ss_pred             ccCCCccceEEECCCCcEEeCccCCCcccccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCC
Confidence            599999999999999999999999998765332222233456778999999988889999999999999999998 9999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |......                                       .....+..   ...      ..    .+......
T Consensus       215 ~~~~~~~---------------------------------------~~~~~~~~---~~~------~~----~~~~~~~~  242 (281)
T 3cc6_A          215 FFWLENK---------------------------------------DVIGVLEK---GDR------LP----KPDLCPPV  242 (281)
T ss_dssp             TTTSCGG---------------------------------------GHHHHHHH---TCC------CC----CCTTCCHH
T ss_pred             cccCChH---------------------------------------HHHHHHhc---CCC------CC----CCCCCCHH
Confidence            9643321                                       11111100   000      00    01112245


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhcc
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNFE  193 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~~  193 (231)
                      +..++.+||+.||++|||+.+++++|...
T Consensus       243 l~~li~~~l~~~p~~Rps~~ell~~L~~~  271 (281)
T 3cc6_A          243 LYTLMTRCWDYDPSDRPRFTELVCSLSDV  271 (281)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHccCCchhCcCHHHHHHHHHHH
Confidence            77899999999999999999999999753

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.88  E-value=1.5e-23  Score=174.25  Aligned_cols=135  Identities=19%  Similarity=0.178  Sum_probs=102.1

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+|||++.++.+||+|||+++..... .......+|++.|+|||++.+..++.++|+||+||++++|++|..||
T Consensus       143 vHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf  221 (353)
T 2i0e_A          143 IYRDLKLDNVMLDSEGHIKIADFGMCKENIWD-GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPF  221 (353)
T ss_dssp             BCCCCCGGGEEECTTSCEEECCCTTCBCCCCT-TCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSS
T ss_pred             EeccCCHHHEEEcCCCcEEEEeCCcccccccC-CcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCC
Confidence            59999999999999999999999999754321 12234567999999999998888999999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      ...........+.                                          ...       ..    ++......+
T Consensus       222 ~~~~~~~~~~~i~------------------------------------------~~~-------~~----~p~~~s~~~  248 (353)
T 2i0e_A          222 EGEDEDELFQSIM------------------------------------------EHN-------VA----YPKSMSKEA  248 (353)
T ss_dssp             CCSSHHHHHHHHH------------------------------------------HCC-------CC----CCTTSCHHH
T ss_pred             CCCCHHHHHHHHH------------------------------------------hCC-------CC----CCCCCCHHH
Confidence            7544321111111                                          000       00    111122456


Q ss_pred             HHHHHhhcCCCCCCCCC-----HHHHHHHHhccc
Q 045790          166 LIVGLWCAHPDRCFRPS-----IRQAIQVLNFET  194 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps-----~~ell~~l~~~~  194 (231)
                      ..++.+||+.||++||+     +.+|++|++|..
T Consensus       249 ~~li~~lL~~dP~~R~~~~~~~~~~i~~h~~f~~  282 (353)
T 2i0e_A          249 VAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRY  282 (353)
T ss_dssp             HHHHHHHTCSCTTSCTTCSTTHHHHHHTSGGGTT
T ss_pred             HHHHHHHhhcCHHHcCCCCCCCHHHHhcCccccC
Confidence            78899999999999994     799999999853

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.88  E-value=5.6e-24  Score=178.29  Aligned_cols=136  Identities=20%  Similarity=0.130  Sum_probs=98.4

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCc-eeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPK-TIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~   83 (231)
                      .||||||+|||++.++.+||+|||+++......... .....++..|+|||++....++.++||||+|+++||+++ |..
T Consensus       235 vHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~  314 (377)
T 3cbl_A          235 IHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGAS  314 (377)
T ss_dssp             ECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCC
T ss_pred             CCcccCHHHEEEcCCCcEEECcCCCceecCCCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCC
Confidence            599999999999999999999999997643221110 111234667999999988889999999999999999998 999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||.......                                       ....+.             .......+.....
T Consensus       315 p~~~~~~~~---------------------------------------~~~~~~-------------~~~~~~~~~~~~~  342 (377)
T 3cbl_A          315 PYPNLSNQQ---------------------------------------TREFVE-------------KGGRLPCPELCPD  342 (377)
T ss_dssp             SSTTSCHHH---------------------------------------HHHHHH-------------TTCCCCCCTTCCH
T ss_pred             CCCCCCHHH---------------------------------------HHHHHH-------------cCCCCCCCCCCCH
Confidence            997543221                                       111110             0001111112234


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhcc
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNFE  193 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~~  193 (231)
                      .+.+++.+||+.||++|||+.+|++.|...
T Consensus       343 ~l~~li~~cl~~dP~~Rps~~~i~~~L~~i  372 (377)
T 3cbl_A          343 AVFRLMEQCWAYEPGQRPSFSTIYQELQSI  372 (377)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCchhCcCHHHHHHHHHHH
Confidence            577899999999999999999999998753

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.88  E-value=1.1e-23  Score=175.50  Aligned_cols=138  Identities=17%  Similarity=0.055  Sum_probs=102.2

Q ss_pred             eecCCCCCCeeeCCCC----cEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhC
Q 045790            6 YSRSPELPPGRGDFNF----NAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATG   81 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~----~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g   81 (231)
                      .||||||+||+++.++    .+||+|||++.......  ......|++.|+|||++.+..++.++||||+|+++|+|++|
T Consensus       137 vHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g  214 (361)
T 2yab_A          137 AHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG  214 (361)
T ss_dssp             ECCCCSGGGEEESCTTSSSCCEEECCCSSCEECCTTC--CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHS
T ss_pred             ccCCCCHHHEEEeCCCCCccCEEEEecCCceEcCCCC--ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhC
Confidence            5999999999998766    79999999998765422  22345789999999999888899999999999999999999


Q ss_pred             CCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHH
Q 045790           82 RKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQ  161 (231)
Q Consensus        82 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  161 (231)
                      ..||...........+......                                             +++....    ..
T Consensus       215 ~~Pf~~~~~~~~~~~i~~~~~~---------------------------------------------~~~~~~~----~~  245 (361)
T 2yab_A          215 ASPFLGDTKQETLANITAVSYD---------------------------------------------FDEEFFS----QT  245 (361)
T ss_dssp             CCSSCCSSHHHHHHHHHTTCCC---------------------------------------------CCHHHHT----TS
T ss_pred             CCCCCCCCHHHHHHHHHhcCCC---------------------------------------------CCchhcc----CC
Confidence            9999765433222211100000                                             0000000    11


Q ss_pred             HHHHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          162 MTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       162 ~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      ...+.+|+..||+.||++|||+.|+++|+++..
T Consensus       246 s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  278 (361)
T 2yab_A          246 SELAKDFIRKLLVKETRKRLTIQEALRHPWITP  278 (361)
T ss_dssp             CHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTSC
T ss_pred             CHHHHHHHHHHCCCChhHCcCHHHHhcCcCcCC
Confidence            234678899999999999999999999999863

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.88  E-value=4.7e-23  Score=170.56  Aligned_cols=148  Identities=11%  Similarity=-0.006  Sum_probs=102.1

Q ss_pred             eecCCCCCCeeeCCCC--cEEEeccccccccCCCCCC------ceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHH
Q 045790            6 YSRSPELPPGRGDFNF--NAKLGDFGLARLMDHELGP------KTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALE   77 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~--~~kl~Dfg~~~~~~~~~~~------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~e   77 (231)
                      .||||||+||+++.++  .+||+|||+++.+......      ......|+..|+|||++.+..++.++||||+|+++|+
T Consensus       173 vH~Dlkp~NIll~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~e  252 (345)
T 2v62_A          173 VHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLR  252 (345)
T ss_dssp             ECSCCSGGGEEEESSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHH
T ss_pred             eCCCcCHHHEEEccCCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHH
Confidence            5999999999998777  9999999999776432111      1134578999999999988889999999999999999


Q ss_pred             HHhCCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcc
Q 045790           78 IATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRF  157 (231)
Q Consensus        78 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  157 (231)
                      |++|..||.....                                     ....+........ . ............  
T Consensus       253 ll~g~~pf~~~~~-------------------------------------~~~~~~~~~~~~~-~-~~~~~~~~~~~~--  291 (345)
T 2v62_A          253 WLCGKLPWEQNLK-------------------------------------DPVAVQTAKTNLL-D-ELPQSVLKWAPS--  291 (345)
T ss_dssp             HHHSSCTTGGGTT-------------------------------------CHHHHHHHHHHHH-H-TTTHHHHHHSCT--
T ss_pred             HHhCCCCcccccc-------------------------------------ccHHHHHHHHhhc-c-cccHHHHhhccc--
Confidence            9999999964321                                     0001111111110 0 000001010000  


Q ss_pred             cHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccC
Q 045790          158 DEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETT  195 (231)
Q Consensus       158 ~~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~  195 (231)
                       ......+.+++..||+.||++|||+.+|++.|.....
T Consensus       292 -~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~  328 (345)
T 2v62_A          292 -GSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI  328 (345)
T ss_dssp             -TSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred             -cccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence             0122467889999999999999999999999986543

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.88  E-value=2e-23  Score=171.22  Aligned_cols=132  Identities=21%  Similarity=0.157  Sum_probs=101.7

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+|||++.++.+||+|||+++.....    ....+|++.|+|||++.+..++.++|+||+|+++++|++|..||
T Consensus       128 vHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf  203 (318)
T 1fot_A          128 IYRDLKPENILLDKNGHIKITDFGFAKYVPDV----TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPF  203 (318)
T ss_dssp             ECCCCCGGGEEECTTSCEEECCCSSCEECSSC----BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTT
T ss_pred             cccCCChheEEEcCCCCEEEeecCcceecCCc----cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCC
Confidence            59999999999999999999999999875431    23457899999999998888999999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      ........                                          ........       ..+    +......+
T Consensus       204 ~~~~~~~~------------------------------------------~~~i~~~~-------~~~----p~~~~~~~  230 (318)
T 1fot_A          204 YDSNTMKT------------------------------------------YEKILNAE-------LRF----PPFFNEDV  230 (318)
T ss_dssp             CCSSHHHH------------------------------------------HHHHHHCC-------CCC----CTTSCHHH
T ss_pred             CCCCHHHH------------------------------------------HHHHHhCC-------CCC----CCCCCHHH
Confidence            75432211                                          11111000       011    11112356


Q ss_pred             HHHHHhhcCCCCCCCC-----CHHHHHHHHhccc
Q 045790          166 LIVGLWCAHPDRCFRP-----SIRQAIQVLNFET  194 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rp-----s~~ell~~l~~~~  194 (231)
                      .+++.+||+.||.+||     ++.+|++|+++..
T Consensus       231 ~~li~~lL~~dp~~R~~~~~~~~~~i~~hp~f~~  264 (318)
T 1fot_A          231 KDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKE  264 (318)
T ss_dssp             HHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSS
T ss_pred             HHHHHHHhccCHHHcCCCcCCCHHHHhcCccccC
Confidence            7889999999999999     9999999999964

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.88  E-value=6.1e-23  Score=166.03  Aligned_cols=143  Identities=13%  Similarity=-0.010  Sum_probs=100.9

Q ss_pred             eecCCCCCCeeeCCCCc-----EEEeccccccccCCCCCC------ceeEeeccccccchhhhhhCCCCCCcccHhHHHH
Q 045790            6 YSRSPELPPGRGDFNFN-----AKLGDFGLARLMDHELGP------KTIMLVGTLAYMASEYISTGRVSKELDVFSFRVV   74 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~-----~kl~Dfg~~~~~~~~~~~------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~v   74 (231)
                      .||||||+||+++.++.     +||+|||++.........      ......|+..|+|||++.+..++.++||||+|++
T Consensus       128 vH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~i  207 (298)
T 1csn_A          128 VYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHV  207 (298)
T ss_dssp             ECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHH
T ss_pred             ecCCCCHHHEEeccCCCCCCCeEEEEECccccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHH
Confidence            59999999999987665     999999999876543221      1234578999999999988889999999999999


Q ss_pred             HHHHHhCCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhccccc
Q 045790           75 ALEIATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLD  154 (231)
Q Consensus        75 l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  154 (231)
                      ++++++|..||......                                    ........+.........     +.+.
T Consensus       208 l~el~~g~~pf~~~~~~------------------------------------~~~~~~~~~~~~~~~~~~-----~~~~  246 (298)
T 1csn_A          208 FMYFLRGSLPWQGLKAA------------------------------------TNKQKYERIGEKKQSTPL-----RELC  246 (298)
T ss_dssp             HHHHHHSSCTTSSCCSC------------------------------------CHHHHHHHHHHHHHHSCH-----HHHT
T ss_pred             HHHHHcCCCCcchhhcc------------------------------------ccHHHHHHHHhhccCccH-----HHHH
Confidence            99999999999753210                                    000111111110000000     0111


Q ss_pred             CcccHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcc
Q 045790          155 SRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFE  193 (231)
Q Consensus       155 ~~~~~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~  193 (231)
                      .    .....+.+++.+||+.||++|||+.+|++.|...
T Consensus       247 ~----~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~  281 (298)
T 1csn_A          247 A----GFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKV  281 (298)
T ss_dssp             T----TSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred             h----hCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHH
Confidence            1    1124678899999999999999999999998863

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.88  E-value=5.7e-24  Score=184.25  Aligned_cols=136  Identities=21%  Similarity=0.149  Sum_probs=100.5

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~p   84 (231)
                      .||||||+|||++.++.+||+|||+++..............++..|+|||++....++.++||||||+++|+|++ |..|
T Consensus       340 vHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p  419 (495)
T 1opk_A          340 IHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP  419 (495)
T ss_dssp             ECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCS
T ss_pred             ccCCCChhhEEECCCCcEEEeecccceeccCCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCC
Confidence            599999999999999999999999998764322111122345678999999988889999999999999999998 8999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |......                                       .+...+.             ...+...+......
T Consensus       420 ~~~~~~~---------------------------------------~~~~~~~-------------~~~~~~~~~~~~~~  447 (495)
T 1opk_A          420 YPGIDLS---------------------------------------QVYELLE-------------KDYRMERPEGCPEK  447 (495)
T ss_dssp             STTCCGG---------------------------------------GHHHHHH-------------TTCCCCCCTTCCHH
T ss_pred             CCCCCHH---------------------------------------HHHHHHH-------------cCCCCCCCCCCCHH
Confidence            9654321                                       1111110             11111112223356


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhcc
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNFE  193 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~~  193 (231)
                      +.+|+.+||+.||++|||+.+|++.|+..
T Consensus       448 l~~li~~cl~~dP~~RPs~~el~~~L~~~  476 (495)
T 1opk_A          448 VYELMRACWQWNPSDRPSFAEIHQAFETM  476 (495)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred             HHHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence            78899999999999999999999999864

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.88  E-value=3.2e-23  Score=167.98  Aligned_cols=141  Identities=19%  Similarity=0.177  Sum_probs=96.1

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+||+++.++.+||+|||++...............|++.|+|||.+.+..++.++||||+|+++|++++|..||
T Consensus       133 ~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf  212 (294)
T 4eqm_A          133 VHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPF  212 (294)
T ss_dssp             CCCCCCGGGEEECTTSCEEECCCSSSTTC-------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSS
T ss_pred             ccCCCCHHHEEECCCCCEEEEeCCCccccccccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCC
Confidence            59999999999999999999999999876543333334567899999999998888999999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      .........                                          ....... .. ........    .....+
T Consensus       213 ~~~~~~~~~------------------------------------------~~~~~~~-~~-~~~~~~~~----~~~~~l  244 (294)
T 4eqm_A          213 NGETAVSIA------------------------------------------IKHIQDS-VP-NVTTDVRK----DIPQSL  244 (294)
T ss_dssp             CSSCHHHHH------------------------------------------HHHHSSC-CC-CHHHHSCT----TSCHHH
T ss_pred             CCCChHHHH------------------------------------------HHHhhcc-CC-Ccchhccc----CCCHHH
Confidence            754422110                                          0010000 00 00001111    122457


Q ss_pred             HHHHHhhcCCCCCCCC-CHHHHHHHHhccc
Q 045790          166 LIVGLWCAHPDRCFRP-SIRQAIQVLNFET  194 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rp-s~~ell~~l~~~~  194 (231)
                      ..++.+||+.||++|| ++.++.+.|....
T Consensus       245 ~~li~~~l~~dp~~R~~~~~~l~~~l~~~~  274 (294)
T 4eqm_A          245 SNVILRATEKDKANRYKTIQEMKDDLSSVL  274 (294)
T ss_dssp             HHHHHHHSCSSGGGSCSSHHHHHHHHHTSS
T ss_pred             HHHHHHHhcCCHhHccccHHHHHHHHHHHH
Confidence            7899999999999999 7888888887543

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.88  E-value=2.1e-23  Score=173.43  Aligned_cols=179  Identities=17%  Similarity=0.124  Sum_probs=106.0

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCc
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      -.||||||+||+++.++.+||+|||++......   ......|+..|+|||++.+..++.++||||+|++++++++|..|
T Consensus       153 i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p  229 (360)
T 3eqc_A          153 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP  229 (360)
T ss_dssp             CCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH---C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCC
T ss_pred             EEcCCccHHHEEECCCCCEEEEECCCCcccccc---cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence            359999999999999999999999998755321   12345789999999999888899999999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccc-hhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGE-KAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      |...........+.................... ........ .................      .+...   ......
T Consensus       230 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~------~~~~~---~~~~~~  299 (360)
T 3eqc_A          230 IPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDS-RPPMAIFELLDYIVNEP------PPKLP---SGVFSL  299 (360)
T ss_dssp             SSCCCHHHHHHHHC-------------------------------CCCHHHHHHHHHHSC------CCCCC---TTTSCH
T ss_pred             CCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccccccCC-CCcccchhhhhHHhccC------CCCCC---cccccH
Confidence            987654433222221110000000000000000 00000000 00011111111111100      01110   111234


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                      .+.+|+.+||+.||++|||+.|+++|+++....
T Consensus       300 ~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~  332 (360)
T 3eqc_A          300 EFQDFVNKCLIKNPAERADLKQLMVHAFIKRSD  332 (360)
T ss_dssp             HHHHHHHHHHCSSTTTSCCHHHHHTSHHHHHHH
T ss_pred             HHHHHHHHHhhcChhhCCCHHHHhhChHhhcch
Confidence            578899999999999999999999999996544

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.88  E-value=1.7e-23  Score=175.00  Aligned_cols=165  Identities=21%  Similarity=0.109  Sum_probs=104.8

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhh-CCCCCCcccHhHHHHHHHHHhCCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIST-GRVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      .||||||+||+++.++.+||+|||+++.....    .....|+..|+|||++.+ ..++.++||||+|++++++++|..|
T Consensus       166 vH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~p  241 (371)
T 4exu_A          166 VHRDLKPGNLAVNEDCELKILDFGLARHADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTL  241 (371)
T ss_dssp             CCSCCCGGGEEECTTCCEEECSTTCC------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCS
T ss_pred             cCCCcCHHHeEECCCCCEEEEecCcccccccC----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCC
Confidence            59999999999999999999999999765422    233467899999999876 5689999999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |......+....+..............+               .......+........ .     ..+ ..........
T Consensus       242 f~~~~~~~~~~~i~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~-~-----~~~-~~~~~~~~~~  299 (371)
T 4exu_A          242 FKGKDYLDQLTQILKVTGVPGTEFVQKL---------------NDKAAKSYIQSLPQTP-R-----KDF-TQLFPRASPQ  299 (371)
T ss_dssp             CCCSSHHHHHHHHHHHHCCCCHHHHTTC---------------SCHHHHHHHHHSCCCC-C-----CCH-HHHSTTSCHH
T ss_pred             CCCCChHHHHHHHHHHhCCCcHHHHHHh---------------hhhhhhhhhhccCCCc-c-----hhH-HHhccccChH
Confidence            9876654444433321111111100000               0001111111100000 0     000 0000112346


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                      +.+|+.+||+.||++|||+.|+++|+++....
T Consensus       300 ~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~  331 (371)
T 4exu_A          300 AADLLEKMLELDVDKRLTAAQALTHPFFEPFR  331 (371)
T ss_dssp             HHHHHHHHSCSCTTTSCCHHHHHTSGGGTTTC
T ss_pred             HHHHHHHHCCCChhhcCCHHHHhcCcccccCC
Confidence            78899999999999999999999999997543

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.88  E-value=5.5e-24  Score=176.37  Aligned_cols=135  Identities=19%  Similarity=0.142  Sum_probs=102.6

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+|||++.++.+||+|||+++..... .......+|++.|+|||++.+..++.++|+||+||++++|++|..||
T Consensus       140 vHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf  218 (345)
T 1xjd_A          140 VYRDLKLDNILLDKDGHIKIADFGMCKENMLG-DAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF  218 (345)
T ss_dssp             BCCCCCGGGEEECTTSCEEECCCTTCBCCCCT-TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred             EeCCCChhhEEECCCCCEEEeEChhhhhcccC-CCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCC
Confidence            59999999999999999999999999764322 12234568999999999998888999999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      ...........+..                                          .       .+.+    +......+
T Consensus       219 ~~~~~~~~~~~i~~------------------------------------------~-------~~~~----p~~~s~~~  245 (345)
T 1xjd_A          219 HGQDEEELFHSIRM------------------------------------------D-------NPFY----PRWLEKEA  245 (345)
T ss_dssp             CCSSHHHHHHHHHH------------------------------------------C-------CCCC----CTTSCHHH
T ss_pred             CCCCHHHHHHHHHh------------------------------------------C-------CCCC----CcccCHHH
Confidence            75443211111110                                          0       0111    11112346


Q ss_pred             HHHHHhhcCCCCCCCCCHH-HHHHHHhccc
Q 045790          166 LIVGLWCAHPDRCFRPSIR-QAIQVLNFET  194 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps~~-ell~~l~~~~  194 (231)
                      .+++.+||+.||++||++. +|++|+++..
T Consensus       246 ~~li~~lL~~dp~~R~~~~~~i~~hp~f~~  275 (345)
T 1xjd_A          246 KDLLVKLFVREPEKRLGVRGDIRQHPLFRE  275 (345)
T ss_dssp             HHHHHHHSCSSGGGSBTTBSCGGGSGGGTT
T ss_pred             HHHHHHHhcCCHhHcCCChHHHHcCccccC
Confidence            7889999999999999998 9999999854

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.88  E-value=1.2e-23  Score=172.92  Aligned_cols=138  Identities=16%  Similarity=0.048  Sum_probs=101.2

Q ss_pred             eecCCCCCCeeeCCCC----cEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhC
Q 045790            6 YSRSPELPPGRGDFNF----NAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATG   81 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~----~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g   81 (231)
                      .||||||+||+++.++    .+||+|||++.......  ......|++.|+|||++.+..++.++||||+|+++++|++|
T Consensus       136 vH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g  213 (326)
T 2y0a_A          136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG  213 (326)
T ss_dssp             ECCCCCGGGEEESCSSSSSCCEEECCCTTCEECCTTS--CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHS
T ss_pred             EcCCCCHHHEEEecCCCCCCCEEEEECCCCeECCCCC--ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHC
Confidence            5999999999998877    79999999998764322  22345789999999999888899999999999999999999


Q ss_pred             CCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHH
Q 045790           82 RKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQ  161 (231)
Q Consensus        82 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  161 (231)
                      ..||...........+....                                         ..    .......    ..
T Consensus       214 ~~pf~~~~~~~~~~~~~~~~-----------------------------------------~~----~~~~~~~----~~  244 (326)
T 2y0a_A          214 ASPFLGDTKQETLANVSAVN-----------------------------------------YE----FEDEYFS----NT  244 (326)
T ss_dssp             CCSSCCSSHHHHHHHHHHTC-----------------------------------------CC----CCHHHHT----TS
T ss_pred             cCCCCCCCHHHHHHHHHhcC-----------------------------------------CC----cCccccc----cC
Confidence            99997543221111110000                                         00    0000000    11


Q ss_pred             HHHHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          162 MTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       162 ~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      ...+.+++.+||+.||++|||+.++++|+++..
T Consensus       245 ~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~  277 (326)
T 2y0a_A          245 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP  277 (326)
T ss_dssp             CHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTSC
T ss_pred             CHHHHHHHHHHccCChhhCCCHHHHhcCCCccC
Confidence            234678899999999999999999999999864

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.88  E-value=2.6e-23  Score=168.09  Aligned_cols=142  Identities=16%  Similarity=0.020  Sum_probs=101.2

Q ss_pred             eecCCCCCCeee---CCCCcEEEeccccccccCCCCCC------ceeEeeccccccchhhhhhCCCCCCcccHhHHHHHH
Q 045790            6 YSRSPELPPGRG---DFNFNAKLGDFGLARLMDHELGP------KTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVAL   76 (231)
Q Consensus         6 ~~rdlk~~nil~---~~~~~~kl~Dfg~~~~~~~~~~~------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~   76 (231)
                      .||||||+||++   +.++.+||+|||++.........      ......|+..|+|||.+.+..++.++||||+|++++
T Consensus       127 vH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~  206 (296)
T 3uzp_A          127 IHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLM  206 (296)
T ss_dssp             ECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHH
T ss_pred             eeCCCCHHHeEEecCCCCCeEEEeeCCCcccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHH
Confidence            599999999999   47889999999999876543221      123457899999999998888999999999999999


Q ss_pred             HHHhCCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCc
Q 045790           77 EIATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSR  156 (231)
Q Consensus        77 el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  156 (231)
                      ++++|+.||......                                   .....+...........  .    +.+...
T Consensus       207 ~l~~g~~pf~~~~~~-----------------------------------~~~~~~~~~~~~~~~~~--~----~~~~~~  245 (296)
T 3uzp_A          207 YFNLGSLPWQGLKAA-----------------------------------TKRQKYERISEKKMSTP--I----EVLCKG  245 (296)
T ss_dssp             HHHHSSCTTSSCCCS-----------------------------------SSSSHHHHHHHHHHHSC--H----HHHTTT
T ss_pred             HHHhCCCCCCCcCch-----------------------------------hhhhhhhhhcccccCCc--h----HHHHhh
Confidence            999999999753211                                   11111111111111000  0    011111


Q ss_pred             ccHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          157 FDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       157 ~~~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      .    ...+.+++.+||+.||++|||+.+|++.|..
T Consensus       246 ~----~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~  277 (296)
T 3uzp_A          246 Y----PSEFATYLNFCRSLRFDDKPDYSYLRQLFRN  277 (296)
T ss_dssp             S----CHHHHHHHHHHHTSCTTCCCCHHHHHHHHHH
T ss_pred             C----CHHHHHHHHHHHhcCcCcCCCHHHHHHHHHH
Confidence            1    2457889999999999999999999999886

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.88  E-value=1e-23  Score=171.84  Aligned_cols=138  Identities=24%  Similarity=0.263  Sum_probs=98.7

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCc-------------eeEeeccccccchhhhhhCCCCCCcccHhHH
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPK-------------TIMLVGTLAYMASEYISTGRVSKELDVFSFR   72 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~-------------~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G   72 (231)
                      .||||||+||+++.++.+||+|||++..........             .....|+..|+|||++.+..++.++||||+|
T Consensus       130 vH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG  209 (310)
T 3s95_A          130 IHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFG  209 (310)
T ss_dssp             ECSCCSTTSEEECTTSCEEECCCTTCEECC--------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHH
T ss_pred             cCCCCCcCeEEECCCCCEEEeecccceecccccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHH
Confidence            599999999999999999999999998764322111             1145789999999999888899999999999


Q ss_pred             HHHHHHHhCCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhccc
Q 045790           73 VVALEIATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANER  152 (231)
Q Consensus        73 ~vl~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (231)
                      ++++++++|..|+........                                 ...........             ..
T Consensus       210 ~~l~el~~g~~~~~~~~~~~~---------------------------------~~~~~~~~~~~-------------~~  243 (310)
T 3s95_A          210 IVLCEIIGRVNADPDYLPRTM---------------------------------DFGLNVRGFLD-------------RY  243 (310)
T ss_dssp             HHHHHHHHTCCSSTTTSCBCT---------------------------------TSSBCHHHHHH-------------HT
T ss_pred             HHHHHHhcCCCCCcchhhhHH---------------------------------HHhhhhhcccc-------------cc
Confidence            999999999998864331100                                 00001111110             11


Q ss_pred             ccCcccHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcc
Q 045790          153 LDSRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFE  193 (231)
Q Consensus       153 l~~~~~~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~  193 (231)
                      ...    .....+..++.+||+.||++|||+.+|++.|+..
T Consensus       244 ~~~----~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l  280 (310)
T 3s95_A          244 CPP----NCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETL  280 (310)
T ss_dssp             CCT----TCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCC----CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            111    1123467899999999999999999999988764

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.88  E-value=5e-24  Score=178.85  Aligned_cols=163  Identities=13%  Similarity=0.094  Sum_probs=106.3

Q ss_pred             eecCCCCCCeeeC-CCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCC-CCCCcccHhHHHHHHHHHhCCC
Q 045790            6 YSRSPELPPGRGD-FNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGR-VSKELDVFSFRVVALEIATGRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~-~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~-~~~~~Dv~s~G~vl~el~~g~~   83 (231)
                      .||||||+||+++ .++.+||+|||+++......  ......++..|+|||.+.+.. ++.++||||+||++++|++|+.
T Consensus       163 ~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~  240 (383)
T 3eb0_A          163 CHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE--PSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKP  240 (383)
T ss_dssp             ECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS--CCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSC
T ss_pred             ccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC--CCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCC
Confidence            5999999999998 68899999999998764322  223456788999999987654 8999999999999999999999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||......+....+...........+......                        .................++.....
T Consensus       241 pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~~~~~~  296 (383)
T 3eb0_A          241 LFSGETSIDQLVRIIQIMGTPTKEQMIRMNPH------------------------YTEVRFPTLKAKDWRKILPEGTPS  296 (383)
T ss_dssp             SSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTT------------------------C--CCCCCCCCCCHHHHSCTTCCH
T ss_pred             CCCCCChHHHHHHHHHHhCCCCHHHHHHhCcc------------------------cccccCCccCcccHHhhCCCCCCH
Confidence            99876655444444322211111100000000                        000000000000000001111234


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      .+.+|+.+||+.||++|||+.|+++|+++..
T Consensus       297 ~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~  327 (383)
T 3eb0_A          297 LAIDLLEQILRYEPDLRINPYEAMAHPFFDH  327 (383)
T ss_dssp             HHHHHHHHHCCSSGGGSCCHHHHHTSGGGHH
T ss_pred             HHHHHHHHHccCChhhCCCHHHHhcCHHHHH
Confidence            5788999999999999999999999999854

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.88  E-value=1.3e-22  Score=166.87  Aligned_cols=141  Identities=16%  Similarity=0.023  Sum_probs=100.4

Q ss_pred             eecCCCCCCeeeCCCCc-----EEEeccccccccCCCCCC------ceeEeeccccccchhhhhhCCCCCCcccHhHHHH
Q 045790            6 YSRSPELPPGRGDFNFN-----AKLGDFGLARLMDHELGP------KTIMLVGTLAYMASEYISTGRVSKELDVFSFRVV   74 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~-----~kl~Dfg~~~~~~~~~~~------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~v   74 (231)
                      .||||||+|||++.++.     +||+|||+++........      ......|+..|+|||++.+..++.++||||+|++
T Consensus       127 iHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~i  206 (330)
T 2izr_A          127 IYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHM  206 (330)
T ss_dssp             ECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHH
T ss_pred             eccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHH
Confidence            59999999999998877     999999999876432221      1235678999999999988889999999999999


Q ss_pred             HHHHHhCCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhccccc
Q 045790           75 ALEIATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLD  154 (231)
Q Consensus        75 l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  154 (231)
                      +++|++|..||......                                       ............. .. .....+.
T Consensus       207 l~ell~g~~Pf~~~~~~---------------------------------------~~~~~~~~i~~~~-~~-~~~~~~~  245 (330)
T 2izr_A          207 FMYFLRGSLPWQGLKAD---------------------------------------TLKERYQKIGDTK-RA-TPIEVLC  245 (330)
T ss_dssp             HHHHHHSSCTTTTCCCS---------------------------------------SHHHHHHHHHHHH-HH-SCHHHHT
T ss_pred             HHHHhcCCCCccccccc---------------------------------------cHHHHHHHHHhhh-cc-CCHHHHh
Confidence            99999999999753211                                       1111111111000 00 0000010


Q ss_pred             CcccHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          155 SRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       155 ~~~~~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      ...     ..+..++..||+.||.+||++.+|++.|..
T Consensus       246 ~~~-----p~~~~li~~~l~~~p~~RP~~~~l~~~l~~  278 (330)
T 2izr_A          246 ENF-----PEMATYLRYVRRLDFFEKPDYDYLRKLFTD  278 (330)
T ss_dssp             TTC-----HHHHHHHHHHHHCCTTCCCCHHHHHHHHHH
T ss_pred             ccC-----hHHHHHHHHHHhCCCCCCCCHHHHHHHHHH
Confidence            111     167889999999999999999999998865

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.88  E-value=4.7e-24  Score=170.42  Aligned_cols=136  Identities=17%  Similarity=0.139  Sum_probs=99.4

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~p   84 (231)
                      .||||||+||+++.++.+||+|||++...............++..|+|||.+.+..++.++||||+|++++++++ |..|
T Consensus       128 ~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p  207 (269)
T 4hcu_A          128 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIP  207 (269)
T ss_dssp             CCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCT
T ss_pred             ecCCcchheEEEcCCCCEEeccccccccccccccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCC
Confidence            599999999999999999999999997654321111122345668999999988889999999999999999999 9999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |...........+..                                          .          .....+......
T Consensus       208 ~~~~~~~~~~~~~~~------------------------------------------~----------~~~~~~~~~~~~  235 (269)
T 4hcu_A          208 YENRSNSEVVEDIST------------------------------------------G----------FRLYKPRLASTH  235 (269)
T ss_dssp             TTTCCHHHHHHHHHT------------------------------------------T----------CCCCCCTTSCHH
T ss_pred             CCCCCHHHHHHHHhc------------------------------------------C----------ccCCCCCcCCHH
Confidence            975443211111110                                          0          000011111245


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhcc
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNFE  193 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~~  193 (231)
                      +..++..||+.||++|||+.+++++|...
T Consensus       236 ~~~li~~~l~~~p~~Rps~~~ll~~l~~l  264 (269)
T 4hcu_A          236 VYQIMNHCWRERPEDRPAFSRLLRQLAEI  264 (269)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHccCCcccCcCHHHHHHHHHHH
Confidence            77899999999999999999999999763

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.88  E-value=2e-23  Score=173.30  Aligned_cols=132  Identities=19%  Similarity=0.119  Sum_probs=102.1

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+|||++.++.+||+|||+++.....    ....+|++.|+|||++.+..++.++|+||+||++++|++|..||
T Consensus       163 vHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf  238 (350)
T 1rdq_E          163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF  238 (350)
T ss_dssp             ECCCCSGGGEEECTTSCEEECCCTTCEECSSC----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred             ccccCccceEEECCCCCEEEcccccceeccCC----cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCC
Confidence            59999999999999999999999999876432    23457899999999998888999999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      ...........+                                          ....       ..+    +......+
T Consensus       239 ~~~~~~~~~~~i------------------------------------------~~~~-------~~~----p~~~~~~~  265 (350)
T 1rdq_E          239 FADQPIQIYEKI------------------------------------------VSGK-------VRF----PSHFSSDL  265 (350)
T ss_dssp             CCSSHHHHHHHH------------------------------------------HHCC-------CCC----CTTCCHHH
T ss_pred             CCCCHHHHHHHH------------------------------------------HcCC-------CCC----CCCCCHHH
Confidence            754422111111                                          1000       011    11122456


Q ss_pred             HHHHHhhcCCCCCCCCC-----HHHHHHHHhccc
Q 045790          166 LIVGLWCAHPDRCFRPS-----IRQAIQVLNFET  194 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps-----~~ell~~l~~~~  194 (231)
                      ..++.+||+.||.+||+     +.+|++|+++..
T Consensus       266 ~~li~~lL~~dp~~R~~~~~~~~~ei~~h~~f~~  299 (350)
T 1rdq_E          266 KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFAT  299 (350)
T ss_dssp             HHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTT
T ss_pred             HHHHHHHhhcCHHhccCCccCCHHHHHhCcCcCC
Confidence            78999999999999998     999999999854

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.88  E-value=3.8e-23  Score=169.71  Aligned_cols=173  Identities=13%  Similarity=0.033  Sum_probs=102.8

Q ss_pred             eecCCCCCCeeeCCCC-cEEEeccccccccCCCCCCceeEeeccccccchhhhhh-CCCCCCcccHhHHHHHHHHHhCCC
Q 045790            6 YSRSPELPPGRGDFNF-NAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIST-GRVSKELDVFSFRVVALEIATGRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~-~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~el~~g~~   83 (231)
                      .||||||+|||++.++ .+||+|||+++.......  .....++..|+|||.+.+ ..++.++||||+|+++++|++|..
T Consensus       152 vH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~  229 (330)
T 3nsz_A          152 MHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE--YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKE  229 (330)
T ss_dssp             ECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCC--CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCS
T ss_pred             eeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCc--cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCC
Confidence            5999999999999766 899999999987643322  234568889999999877 558999999999999999999999


Q ss_pred             ccccch-hhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           84 VINRYK-AQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        84 p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      ||.... .......+.....           ..................+...    .... ..................
T Consensus       230 p~~~~~~~~~~l~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~  293 (330)
T 3nsz_A          230 PFFHGHDNYDQLVRIAKVLG-----------TEDLYDYIDKYNIELDPRFNDI----LGRH-SRKRWERFVHSENQHLVS  293 (330)
T ss_dssp             SSSCCSSHHHHHHHHHHHHC-----------HHHHHHHHHHTTCCCCTHHHHH----HCCC-CCCCGGGGCCTTTGGGCC
T ss_pred             CcccCCchHHHHHHHHHhcC-----------CchhhhHHHHhccccccchhhh----hhhc-cccchhhhccccccccCC
Confidence            995322 1111111100000           0000000000000000000000    0000 000000000011111123


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                      ..+.+|+.+||+.||++|||+.|+++|+++....
T Consensus       294 ~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~~  327 (330)
T 3nsz_A          294 PEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVV  327 (330)
T ss_dssp             HHHHHHHHTTSCSSGGGSCCHHHHHTSGGGTTCC
T ss_pred             HHHHHHHHHHhcCCcccCCCHHHHhcCccHhhhc
Confidence            5678899999999999999999999999997654

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.88  E-value=1.2e-23  Score=176.75  Aligned_cols=184  Identities=12%  Similarity=0.039  Sum_probs=101.5

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCC------CceeEeeccccccchhhhhh--CCCCCCcccHhHHHHHHH
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELG------PKTIMLVGTLAYMASEYIST--GRVSKELDVFSFRVVALE   77 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~------~~~~~~~g~~~y~aPE~~~~--~~~~~~~Dv~s~G~vl~e   77 (231)
                      .||||||+|||++.++.+||+|||.+........      .......|+..|+|||++.+  ..++.++||||+||++++
T Consensus       150 vHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~e  229 (389)
T 3gni_B          150 VHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACE  229 (389)
T ss_dssp             ECCCCSGGGEEECTTCCEEECCGGGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHH
T ss_pred             ecCCCCHHHEEEcCCCCEEEcccccceeeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHH
Confidence            5999999999999999999999998765421110      01122367888999999977  568899999999999999


Q ss_pred             HHhCCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcc
Q 045790           78 IATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRF  157 (231)
Q Consensus        78 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  157 (231)
                      |++|..||...........+...........   ....................+......    ...............
T Consensus       230 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~  302 (389)
T 3gni_B          230 LANGHVPFKDMPATQMLLEKLNGTVPCLLDT---STIPAEELTMSPSRSVANSGLSDSLTT----STPRPSNGDSPSHPY  302 (389)
T ss_dssp             HHHSSCTTTTCCSTTHHHHC------------------------------------------------------------
T ss_pred             HHHCCCCCCCCCHHHHHHHHhcCCCCccccc---ccccccccccccccccccccccccccc----CccccccCCCCCCcc
Confidence            9999999976544333222221110000000   000000000000000000000000000    000000000000111


Q ss_pred             cHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          158 DEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       158 ~~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                      .......+.+|+.+||+.||++|||+.|+++|+++....
T Consensus       303 ~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~~~  341 (389)
T 3gni_B          303 HRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIK  341 (389)
T ss_dssp             ---CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGGC-
T ss_pred             ccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHHHh
Confidence            122345678899999999999999999999999997654

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.88  E-value=5.6e-23  Score=166.87  Aligned_cols=143  Identities=15%  Similarity=0.004  Sum_probs=103.4

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCC-CceeEeeccccccchhhhhhCC--CCCCcccHhHHHHHHHHHhC
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELG-PKTIMLVGTLAYMASEYISTGR--VSKELDVFSFRVVALEIATG   81 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~--~~~~~Dv~s~G~vl~el~~g   81 (231)
                      -.||||||+||+++.++.+||+|||++........ .......|+..|+|||++.+..  ++.++||||+|++++++++|
T Consensus       130 i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g  209 (305)
T 2wtk_C          130 IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTG  209 (305)
T ss_dssp             EECSCCSGGGEEECTTCCEEECCCTTCEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHS
T ss_pred             eeecCCCcccEEEcCCCcEEeeccccccccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhC
Confidence            35999999999999999999999999977643221 2233456889999999987644  36789999999999999999


Q ss_pred             CCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHH
Q 045790           82 RKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQ  161 (231)
Q Consensus        82 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  161 (231)
                      ..||.......                                          ....... ..      ..+..    ..
T Consensus       210 ~~p~~~~~~~~------------------------------------------~~~~i~~-~~------~~~~~----~~  236 (305)
T 2wtk_C          210 LYPFEGDNIYK------------------------------------------LFENIGK-GS------YAIPG----DC  236 (305)
T ss_dssp             SCSCCCSSHHH------------------------------------------HHHHHHH-CC------CCCCS----SS
T ss_pred             CCCCCCchHHH------------------------------------------HHHHHhc-CC------CCCCC----cc
Confidence            99997543221                                          1111100 00      01111    12


Q ss_pred             HHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCCCCCC
Q 045790          162 MTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTMPNLP  200 (231)
Q Consensus       162 ~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~~~~~  200 (231)
                      ...+.+++.+||+.||++|||+.++++|+++....+...
T Consensus       237 ~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~~~~  275 (305)
T 2wtk_C          237 GPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHPPAE  275 (305)
T ss_dssp             CHHHHHHHHHHTCSSTTTSCCHHHHHHSHHHHSCCCC-C
T ss_pred             CHHHHHHHHHHccCChhhCCCHHHHhcCcccccCCCCcC
Confidence            245678999999999999999999999999977665443

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.88  E-value=1.6e-23  Score=170.61  Aligned_cols=137  Identities=19%  Similarity=0.160  Sum_probs=100.5

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCc-eeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPK-TIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~   83 (231)
                      .||||||+||+++.++.+||+|||++.......... .....++..|+|||.+.+..++.++||||+|+++++|++ |..
T Consensus       167 ~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~  246 (313)
T 1t46_A          167 IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSS  246 (313)
T ss_dssp             CCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCC
T ss_pred             ecCCCccceEEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCC
Confidence            599999999999999999999999998765432221 223456778999999988889999999999999999998 999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||......                                      ..+......             ......+.....
T Consensus       247 p~~~~~~~--------------------------------------~~~~~~~~~-------------~~~~~~~~~~~~  275 (313)
T 1t46_A          247 PYPGMPVD--------------------------------------SKFYKMIKE-------------GFRMLSPEHAPA  275 (313)
T ss_dssp             SSTTCCSS--------------------------------------HHHHHHHHH-------------TCCCCCCTTSCH
T ss_pred             CCCcccch--------------------------------------hHHHHHhcc-------------CCCCCCcccCCH
Confidence            98643210                                      011111110             000111112234


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhcc
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNFE  193 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~~  193 (231)
                      .+..++.+||+.||++|||+.+++++|...
T Consensus       276 ~l~~li~~~l~~dp~~Rps~~ell~~L~~~  305 (313)
T 1t46_A          276 EMYDIMKTCWDADPLKRPTFKQIVQLIEKQ  305 (313)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCchhCcCHHHHHHHHHHH
Confidence            578899999999999999999999999863

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.88  E-value=2.8e-23  Score=185.95  Aligned_cols=135  Identities=19%  Similarity=0.178  Sum_probs=104.5

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+|||++.++.+||+|||+++..... .......+||+.|+|||++.+..++.++|+||+|+++|||++|..||
T Consensus       464 iHrDLKp~NILl~~~g~ikL~DFGla~~~~~~-~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf  542 (674)
T 3pfq_A          464 IYRDLKLDNVMLDSEGHIKIADFGMCKENIWD-GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPF  542 (674)
T ss_dssp             ECCCCCSTTEEECSSSCEEECCCTTCEECCCT-TCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSS
T ss_pred             EeccCChhhEEEcCCCcEEEeecceeeccccC-CcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCC
Confidence            59999999999999999999999999764322 12244568999999999998888999999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      ...........+.....                                                     .++......+
T Consensus       543 ~~~~~~~~~~~i~~~~~-----------------------------------------------------~~p~~~s~~~  569 (674)
T 3pfq_A          543 EGEDEDELFQSIMEHNV-----------------------------------------------------AYPKSMSKEA  569 (674)
T ss_dssp             CCSSHHHHHHHHHSSCC-----------------------------------------------------CCCTTSCHHH
T ss_pred             CCCCHHHHHHHHHhCCC-----------------------------------------------------CCCccCCHHH
Confidence            76554322222221100                                                     0111123456


Q ss_pred             HHHHHhhcCCCCCCCCCH-----HHHHHHHhccc
Q 045790          166 LIVGLWCAHPDRCFRPSI-----RQAIQVLNFET  194 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps~-----~ell~~l~~~~  194 (231)
                      .+|+.+||+.||++|+++     .||++|++|..
T Consensus       570 ~~li~~lL~~dP~~R~~~~~~~~~ei~~h~ff~~  603 (674)
T 3pfq_A          570 VAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRY  603 (674)
T ss_dssp             HHHHHHHSCSSSTTCTTCSTTHHHHHHSSGGGSS
T ss_pred             HHHHHHHccCCHHHCCCCCCCcHHHHhcCccccC
Confidence            788999999999999997     99999999864

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.88  E-value=9.2e-23  Score=166.25  Aligned_cols=137  Identities=20%  Similarity=0.231  Sum_probs=94.0

Q ss_pred             eeecCCCCCCeeeCCCCc-EEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCC
Q 045790            5 AYSRSPELPPGRGDFNFN-AKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRK   83 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~-~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~   83 (231)
                      -.||||||+||+++.++. +||+|||++......    .....|+..|+|||++.+..++.++||||+|++++++++|+.
T Consensus       126 ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~  201 (307)
T 2eva_A          126 LIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH----MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRK  201 (307)
T ss_dssp             CCCCCCSGGGEEEETTTTEEEECCCCC----------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCC
T ss_pred             eecCCCChhHEEEeCCCCEEEEcccccccccccc----cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCC
Confidence            459999999999988776 799999998765321    223468999999999988889999999999999999999999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||......                                        .....+......      .+....    ....
T Consensus       202 p~~~~~~~----------------------------------------~~~~~~~~~~~~------~~~~~~----~~~~  231 (307)
T 2eva_A          202 PFDEIGGP----------------------------------------AFRIMWAVHNGT------RPPLIK----NLPK  231 (307)
T ss_dssp             TTTTTCSS----------------------------------------HHHHHHHHHTTC------CCCCBT----TCCH
T ss_pred             CchhhCcc----------------------------------------HHHHHHHHhcCC------CCCccc----ccCH
Confidence            99642210                                        001111111000      011111    1123


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhcccC
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNFETT  195 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~  195 (231)
                      .+.+++.+||+.||++|||+.+++++|.....
T Consensus       232 ~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~  263 (307)
T 2eva_A          232 PIESLMTRCWSKDPSQRPSMEEIVKIMTHLMR  263 (307)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGG
T ss_pred             HHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence            56789999999999999999999999987543

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.88  E-value=7.1e-24  Score=174.29  Aligned_cols=148  Identities=14%  Similarity=0.022  Sum_probs=84.9

Q ss_pred             eecCCCCCCeeeCCCC---cEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCC
Q 045790            6 YSRSPELPPGRGDFNF---NAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGR   82 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~---~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~   82 (231)
                      .||||||+||+++.++   .+||+|||+++...... .......|+..|+|||++.+..++.++||||+|++++++++|.
T Consensus       128 vH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~  206 (325)
T 3kn6_A          128 VHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN-QPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQ  206 (325)
T ss_dssp             ECCCCCGGGEEEEC----CEEEECCCTTCEECCC-----------------------CCCCHHHHHHHHHHHHHHHHHSS
T ss_pred             eecCCCHHHEEEecCCCcccEEEeccccceecCCCC-CcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCC
Confidence            5999999999997654   79999999997654322 2234457799999999998888999999999999999999999


Q ss_pred             CccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           83 KVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        83 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      .||......                                   .................       ............
T Consensus       207 ~pf~~~~~~-----------------------------------~~~~~~~~~~~~i~~~~-------~~~~~~~~~~~s  244 (325)
T 3kn6_A          207 VPFQSHDRS-----------------------------------LTCTSAVEIMKKIKKGD-------FSFEGEAWKNVS  244 (325)
T ss_dssp             CTTC------------------------------------------CCCHHHHHHHHTTTC-------CCCCSHHHHTSC
T ss_pred             CCCCCCccc-----------------------------------cccccHHHHHHHHHcCC-------CCCCcccccCCC
Confidence            999754321                                   00011111111111000       000000001123


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                      ..+.+++.+||+.||++|||+.++++|+++....
T Consensus       245 ~~~~~li~~~L~~dP~~Rpt~~ell~h~w~~~~~  278 (325)
T 3kn6_A          245 QEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGS  278 (325)
T ss_dssp             HHHHHHHHHHHCCCTTTCCCTTTSTTCGGGCTTC
T ss_pred             HHHHHHHHHHCCCChhHCCCHHHHhcChhhccCc
Confidence            4577899999999999999999999999997644

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.88  E-value=1.6e-23  Score=170.79  Aligned_cols=137  Identities=23%  Similarity=0.161  Sum_probs=100.1

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCc-eeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPK-TIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~   83 (231)
                      .||||||.||+++.++.+||+|||+++......... .....++..|+|||++.+..++.++||||+|++++++++ |..
T Consensus       170 ~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~  249 (316)
T 2xir_A          170 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS  249 (316)
T ss_dssp             CCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred             ccccCccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCC
Confidence            599999999999999999999999997664332222 233567889999999988889999999999999999998 999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||......                                      ..+..   ... ...     ...    .+.....
T Consensus       250 p~~~~~~~--------------------------------------~~~~~---~~~-~~~-----~~~----~~~~~~~  278 (316)
T 2xir_A          250 PYPGVKID--------------------------------------EEFCR---RLK-EGT-----RMR----APDYTTP  278 (316)
T ss_dssp             SSTTCCCS--------------------------------------HHHHH---HHH-HTC-----CCC----CCTTCCH
T ss_pred             CCcccchh--------------------------------------HHHHH---Hhc-cCc-----cCC----CCCCCCH
Confidence            98643210                                      01111   000 000     000    1111224


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhcc
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNFE  193 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~~  193 (231)
                      .+..++.+||+.||.+|||+.+|+++|...
T Consensus       279 ~l~~li~~~l~~dp~~Rps~~ell~~L~~~  308 (316)
T 2xir_A          279 EMYQTMLDCWHGEPSQRPTFSELVEHLGNL  308 (316)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            567889999999999999999999999763

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.88  E-value=7.4e-24  Score=170.39  Aligned_cols=135  Identities=16%  Similarity=0.158  Sum_probs=98.7

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~p   84 (231)
                      +||||||+||+++.++.+||+|||++...............++..|+|||.+.+..++.++||||+|++++++++ |..|
T Consensus       142 ~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p  221 (283)
T 3gen_A          142 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP  221 (283)
T ss_dssp             CCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCT
T ss_pred             cCCCCccceEEEcCCCCEEEccccccccccccccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence            599999999999999999999999997654321111122345667999999988889999999999999999998 9999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |...........+..                                                    ......+......
T Consensus       222 ~~~~~~~~~~~~~~~----------------------------------------------------~~~~~~~~~~~~~  249 (283)
T 3gen_A          222 YERFTNSETAEHIAQ----------------------------------------------------GLRLYRPHLASEK  249 (283)
T ss_dssp             TTTSCHHHHHHHHHT----------------------------------------------------TCCCCCCTTCCHH
T ss_pred             ccccChhHHHHHHhc----------------------------------------------------ccCCCCCCcCCHH
Confidence            975442211111110                                                    0000011111245


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      +..++.+||+.||++|||+.+++++|..
T Consensus       250 l~~li~~~l~~~p~~Rps~~~ll~~L~~  277 (283)
T 3gen_A          250 VYTIMYSCWHEKADERPTFKILLSNILD  277 (283)
T ss_dssp             HHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHHHHccCChhHCcCHHHHHHHHHH
Confidence            7789999999999999999999999975

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.88  E-value=3.3e-23  Score=171.13  Aligned_cols=141  Identities=16%  Similarity=0.007  Sum_probs=98.8

Q ss_pred             eecCCCCCCeeeCCCC--cEEEeccccccccCCCCC---CceeEeeccccccchhhhhh--CCCCCCcccHhHHHHHHHH
Q 045790            6 YSRSPELPPGRGDFNF--NAKLGDFGLARLMDHELG---PKTIMLVGTLAYMASEYIST--GRVSKELDVFSFRVVALEI   78 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~--~~kl~Dfg~~~~~~~~~~---~~~~~~~g~~~y~aPE~~~~--~~~~~~~Dv~s~G~vl~el   78 (231)
                      .||||||+||+++.++  .+||+|||++........   .......|+..|+|||.+.+  ..++.++||||+|+++++|
T Consensus       190 vH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el  269 (345)
T 3hko_A          190 CHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLL  269 (345)
T ss_dssp             ECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHHHHH
T ss_pred             cccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHHHHHHHH
Confidence            5999999999998665  899999999976543211   12345678999999999865  5688999999999999999


Q ss_pred             HhCCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCccc
Q 045790           79 ATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFD  158 (231)
Q Consensus        79 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  158 (231)
                      ++|..||...........+.                                          .....  ...+..     
T Consensus       270 ~~g~~pf~~~~~~~~~~~~~------------------------------------------~~~~~--~~~~~~-----  300 (345)
T 3hko_A          270 LMGAVPFPGVNDADTISQVL------------------------------------------NKKLC--FENPNY-----  300 (345)
T ss_dssp             HHSSCSSCCSSHHHHHHHHH------------------------------------------HCCCC--TTSGGG-----
T ss_pred             HHCCCCCCCCChHHHHHHHH------------------------------------------hcccc--cCCccc-----
Confidence            99999997544321111111                                          00000  000000     


Q ss_pred             HHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccC
Q 045790          159 EQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETT  195 (231)
Q Consensus       159 ~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~  195 (231)
                      ......+.+++.+||+.||++|||+.++++|+++...
T Consensus       301 ~~~~~~~~~li~~~l~~~p~~Rps~~~~l~hp~~~~~  337 (345)
T 3hko_A          301 NVLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQF  337 (345)
T ss_dssp             GGSCHHHHHHHHHHSCSCTTTSCCHHHHHHSHHHHTT
T ss_pred             ccCCHHHHHHHHHHcCCChhHCCCHHHHhcChhhccC
Confidence            0112456789999999999999999999999998653

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.88  E-value=8e-24  Score=176.00  Aligned_cols=141  Identities=18%  Similarity=0.161  Sum_probs=101.1

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhC--CCCCCcccHhHHHHHHHHHhCCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTG--RVSKELDVFSFRVVALEIATGRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~--~~~~~~Dv~s~G~vl~el~~g~~   83 (231)
                      .||||||+|||++.++.+||+|||+++..............|+..|+|||++.+.  .++.++||||+||++++|++|..
T Consensus       181 vH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~  260 (355)
T 1vzo_A          181 IYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGAS  260 (355)
T ss_dssp             CCCCCCGGGEEECTTSCEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSC
T ss_pred             ccCCCCHHHEEECCCCcEEEeeCCCCeecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCC
Confidence            5999999999999999999999999976543222223345789999999999753  36789999999999999999999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||......                                      .............       .+.    ++.....
T Consensus       261 pf~~~~~~--------------------------------------~~~~~~~~~~~~~-------~~~----~~~~~~~  291 (355)
T 1vzo_A          261 PFTVDGEK--------------------------------------NSQAEISRRILKS-------EPP----YPQEMSA  291 (355)
T ss_dssp             TTSCTTSC--------------------------------------CCHHHHHHHHHHC-------CCC----CCTTSCH
T ss_pred             CCccCCcc--------------------------------------chHHHHHHHHhcc-------CCC----CCcccCH
Confidence            99643210                                      0111111111110       011    1112234


Q ss_pred             HHHHHHHhhcCCCCCCCC-----CHHHHHHHHhcccC
Q 045790          164 CLLIVGLWCAHPDRCFRP-----SIRQAIQVLNFETT  195 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rp-----s~~ell~~l~~~~~  195 (231)
                      .+.+++.+||+.||++||     |+.++++|+++...
T Consensus       292 ~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~~~  328 (355)
T 1vzo_A          292 LAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKI  328 (355)
T ss_dssp             HHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTC
T ss_pred             HHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchhcC
Confidence            567899999999999999     99999999999753

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.88  E-value=4.6e-23  Score=168.87  Aligned_cols=163  Identities=16%  Similarity=0.071  Sum_probs=106.6

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||.||+++.++.+||+|||++......  .......|+..|+|||++.+..++.++||||+|++++++++|..||
T Consensus       142 ~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf  219 (326)
T 1blx_A          142 VHRDLKPQNILVTSSGQIKLADFGLARIYSFQ--MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLF  219 (326)
T ss_dssp             CCCCCCGGGEEECTTCCEEECSCCSCCCCCGG--GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred             eeccCCHHHeEEcCCCCEEEecCcccccccCC--CCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCC
Confidence            59999999999999999999999998765422  1223456788999999998888999999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      ...........+...........+..............   .               ....    ..+..    .....+
T Consensus       220 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~---~---------------~~~~----~~~~~----~~~~~~  273 (326)
T 1blx_A          220 RGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSK---S---------------AQPI----EKFVT----DIDELG  273 (326)
T ss_dssp             CCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCC---C---------------CCCG----GGTCC----SCCHHH
T ss_pred             CCCCHHHHHHHHHHHcCCCCcccCccccccchhhhccc---C---------------cchh----hhccc----cCCHHH
Confidence            87654433333321111100000000000000000000   0               0000    00111    112356


Q ss_pred             HHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          166 LIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                      .+++.+||+.||++|||+.++++|+++....
T Consensus       274 ~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~  304 (326)
T 1blx_A          274 KDLLLKCLTFNPAKRISAYSALSHPYFQDLE  304 (326)
T ss_dssp             HHHHHHHSCSSTTTSCCHHHHHTSGGGTTCC
T ss_pred             HHHHHHHcCCCcccCCCHHHHhcCccccccc
Confidence            7899999999999999999999999986543

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.88  E-value=1.7e-23  Score=171.39  Aligned_cols=137  Identities=18%  Similarity=0.132  Sum_probs=92.9

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCc-eeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPK-TIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~   83 (231)
                      .||||||+||+++.++.+||+|||+++......... .....++..|+|||.+.+..++.++||||+|++++++++ |..
T Consensus       159 vH~Dikp~NIli~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~  238 (323)
T 3qup_A          159 IHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQT  238 (323)
T ss_dssp             CCSCCSGGGEEECTTSCEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred             ccCCCCcceEEEcCCCCEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCC
Confidence            599999999999999999999999997664322211 223455778999999988889999999999999999999 899


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||...........+.                                          ...          ....+.....
T Consensus       239 p~~~~~~~~~~~~~~------------------------------------------~~~----------~~~~~~~~~~  266 (323)
T 3qup_A          239 PYAGIENAEIYNYLI------------------------------------------GGN----------RLKQPPECME  266 (323)
T ss_dssp             TTTTCCGGGHHHHHH------------------------------------------TTC----------CCCCCTTCCH
T ss_pred             CccccChHHHHHHHh------------------------------------------cCC----------CCCCCCccCH
Confidence            997543221111110                                          000          0011112234


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      .+.+++.+||+.||++|||+.++++.++...
T Consensus       267 ~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l  297 (323)
T 3qup_A          267 EVYDLMYQCWSADPKQRPSFTCLRMELENIL  297 (323)
T ss_dssp             HHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            5788999999999999999888888777643

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.88  E-value=8.4e-23  Score=167.76  Aligned_cols=174  Identities=18%  Similarity=0.044  Sum_probs=109.7

Q ss_pred             eecCCCCCCeeeCC-------------------CCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCc
Q 045790            6 YSRSPELPPGRGDF-------------------NFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKEL   66 (231)
Q Consensus         6 ~~rdlk~~nil~~~-------------------~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~   66 (231)
                      .||||||+||+++.                   ++.+||+|||++......    .....|+..|+|||++.+..++.++
T Consensus       140 vH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~  215 (339)
T 1z57_A          140 THTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEH----HSTLVSTRHYRAPEVILALGWSQPC  215 (339)
T ss_dssp             ECCCCCGGGEEESCCCEEEEEC----CEEEEESCCCEEECCCSSCEETTSC----CCSSCSCGGGCCHHHHTTSCCCTHH
T ss_pred             cCCCCCHHHEEEeccccccccCCccccccccccCCCceEeeCcccccCccc----cccccCCccccChHHhhCCCCCcch
Confidence            59999999999987                   668999999999765422    2334688999999999888899999


Q ss_pred             ccHhHHHHHHHHHhCCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCC--CCCchhHHHHHHHhhcch
Q 045790           67 DVFSFRVVALEIATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSK--NYCPKLVAWVWDLYGERK  144 (231)
Q Consensus        67 Dv~s~G~vl~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~  144 (231)
                      ||||+|++++++++|..||...........+.......+..........   ........  ........++.....  .
T Consensus       216 Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~--~  290 (339)
T 1z57_A          216 DVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKR---KYFHHDRLDWDEHSSAGRYVSRACK--P  290 (339)
T ss_dssp             HHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHHHHCSCCHHHHHHCSCG---GGEETTEECCCTTSHHHHHHHHHCC--C
T ss_pred             hhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhccch---hHHhhccccccccccccchhhhcCc--c
Confidence            9999999999999999999876544333322221111111100000000   00000000  011111111111110  0


Q ss_pred             hhhhhcccccCcccHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          145 LLSAANERLDSRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       145 ~~~~~~~~l~~~~~~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      .    ...  ..........+.+++.+||+.||++|||+.||++|+++..
T Consensus       291 ~----~~~--~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~  334 (339)
T 1z57_A          291 L----KEF--MLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDL  334 (339)
T ss_dssp             G----GGG--CSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGG
T ss_pred             h----hhh--cccchhhHHHHHHHHHHHhCcCcccccCHHHHhcCHHHHH
Confidence            0    000  1122345677889999999999999999999999999864

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.88  E-value=5.8e-24  Score=174.10  Aligned_cols=152  Identities=17%  Similarity=0.097  Sum_probs=103.5

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCc--eeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCC
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPK--TIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGR   82 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~   82 (231)
                      -.||||||+||+++.++.+||+|||++..........  .....++..|+|||++.+..++.++||||+|++++++++|.
T Consensus       155 ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~  234 (318)
T 3lxp_A          155 YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHC  234 (318)
T ss_dssp             EECSCCSGGGEEECTTCCEEECCGGGCEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTT
T ss_pred             ccCCCCchheEEEcCCCCEEECCccccccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCC
Confidence            3599999999999999999999999998765432211  23345677899999998888899999999999999999999


Q ss_pred             CccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           83 KVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        83 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      .||........ ....                            ........        ...............+....
T Consensus       235 ~p~~~~~~~~~-~~~~----------------------------~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~  277 (318)
T 3lxp_A          235 DSSQSPPTKFL-ELIG----------------------------IAQGQMTV--------LRLTELLERGERLPRPDKCP  277 (318)
T ss_dssp             CGGGSHHHHHH-HHHC----------------------------SCCHHHHH--------HHHHHHHHTTCCCCCCTTCC
T ss_pred             Ccccccchhhh-hhhc----------------------------ccccchhH--------HHHHHHHhcccCCCCCcccc
Confidence            99975432100 0000                            00000000        01111111222222223334


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHhcc
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLNFE  193 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~  193 (231)
                      ..+.+++.+||+.||++|||+.+|++.|...
T Consensus       278 ~~l~~li~~~l~~dP~~Rps~~ell~~L~~l  308 (318)
T 3lxp_A          278 AEVYHLMKNCWETEASFRPTFENLIPILKTV  308 (318)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence            5688999999999999999999999988763

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.88  E-value=3.1e-23  Score=170.56  Aligned_cols=135  Identities=17%  Similarity=0.110  Sum_probs=97.9

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+|||++.++.+||+|||+++...... .......|+..|+|||++.+..++.++||||+|+++|+|++|..||
T Consensus       143 vH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf  221 (327)
T 3a62_A          143 IYRDLKPENIMLNHQGHVKLTDFGLCKESIHDG-TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPF  221 (327)
T ss_dssp             CCCCCCTTTEEECTTSCEEECCCSCC-----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred             EcccCCHHHeEECCCCcEEEEeCCcccccccCC-ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCC
Confidence            599999999999999999999999987543211 1123356899999999998888999999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      ..........                                          ......       ..+    +......+
T Consensus       222 ~~~~~~~~~~------------------------------------------~i~~~~-------~~~----p~~~~~~~  248 (327)
T 3a62_A          222 TGENRKKTID------------------------------------------KILKCK-------LNL----PPYLTQEA  248 (327)
T ss_dssp             CCSSHHHHHH------------------------------------------HHHHTC-------CCC----CTTSCHHH
T ss_pred             CCCCHHHHHH------------------------------------------HHHhCC-------CCC----CCCCCHHH
Confidence            7544221111                                          111000       011    11122456


Q ss_pred             HHHHHhhcCCCCCCCC-----CHHHHHHHHhccc
Q 045790          166 LIVGLWCAHPDRCFRP-----SIRQAIQVLNFET  194 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rp-----s~~ell~~l~~~~  194 (231)
                      .+++.+||+.||++||     ++.++++|+++..
T Consensus       249 ~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~f~~  282 (327)
T 3a62_A          249 RDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRH  282 (327)
T ss_dssp             HHHHHHHSCSCGGGSTTSSTTTHHHHHHSGGGSS
T ss_pred             HHHHHHHHhcCHhhccCCCCCCHHHHHcCCcccC
Confidence            7899999999999999     8999999999964

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.88  E-value=5e-23  Score=170.83  Aligned_cols=141  Identities=16%  Similarity=0.102  Sum_probs=93.6

Q ss_pred             eecCCCCCCeeeCC---CCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCC
Q 045790            6 YSRSPELPPGRGDF---NFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGR   82 (231)
Q Consensus         6 ~~rdlk~~nil~~~---~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~   82 (231)
                      .||||||+||+++.   ++.+||+|||+++.....  .......|+..|+|||++.+..++.++||||+||++|++++|.
T Consensus       170 vH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~  247 (349)
T 2w4o_A          170 VHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ--VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGF  247 (349)
T ss_dssp             CCCCCCGGGEEESSSSTTCCEEECCCC------------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred             EecCCCcccEEEecCCCCCCEEEccCccccccCcc--cccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCC
Confidence            59999999999975   889999999998765432  1223457899999999998888999999999999999999999


Q ss_pred             CccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           83 KVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        83 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      .||........                                         ......... .      ...........
T Consensus       248 ~pf~~~~~~~~-----------------------------------------~~~~i~~~~-~------~~~~~~~~~~~  279 (349)
T 2w4o_A          248 EPFYDERGDQF-----------------------------------------MFRRILNCE-Y------YFISPWWDEVS  279 (349)
T ss_dssp             CTTCCTTCHHH-----------------------------------------HHHHHHTTC-C------CCCTTTTTTSC
T ss_pred             CCCCCCcccHH-----------------------------------------HHHHHHhCC-C------ccCCchhhhCC
Confidence            99965432110                                         000110000 0      00000001122


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                      ..+.+++.+||+.||++|||+.++++|+++....
T Consensus       280 ~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~  313 (349)
T 2w4o_A          280 LNAKDLVRKLIVLDPKKRLTTFQALQHPWVTGKA  313 (349)
T ss_dssp             HHHHHHHHTTSCSSGGGSCCHHHHHHSTTTTSTT
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHhcCcccCCCc
Confidence            3567899999999999999999999999987644

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.88  E-value=2.8e-23  Score=177.92  Aligned_cols=132  Identities=22%  Similarity=0.179  Sum_probs=98.2

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~p   84 (231)
                      .||||||+|||++.++.+||+|||+++.....    .....++..|+|||++.+..++.++||||+|+++|+|++ |..|
T Consensus       311 vHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P  386 (450)
T 1k9a_A          311 VHRDLAARNVLVSEDNVAKVSDFGLTKEASST----QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP  386 (450)
T ss_dssp             ECSCCCGGGEEECTTSCEEECCCTTCEECC----------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCS
T ss_pred             eCCCCCHhhEEECCCCCEEEeeCCCccccccc----ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence            59999999999999999999999999754321    122356788999999988889999999999999999998 9999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |......                                       .+...+.             ...+...+......
T Consensus       387 ~~~~~~~---------------------------------------~~~~~i~-------------~~~~~~~p~~~~~~  414 (450)
T 1k9a_A          387 YPRIPLK---------------------------------------DVVPRVE-------------KGYKMDAPDGCPPA  414 (450)
T ss_dssp             STTSCTT---------------------------------------THHHHHH-------------TTCCCCCCTTCCHH
T ss_pred             CCCCCHH---------------------------------------HHHHHHH-------------cCCCCCCCCcCCHH
Confidence            9653321                                       1111110             01111122223356


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhcc
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNFE  193 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~~  193 (231)
                      +.+++.+||+.||++|||+.+|++.|+..
T Consensus       415 l~~li~~cl~~dp~~Rpt~~~l~~~L~~i  443 (450)
T 1k9a_A          415 VYDVMKNCWHLDAATRPTFLQLREQLEHI  443 (450)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence            78899999999999999999999998763

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.88  E-value=2.7e-23  Score=167.38  Aligned_cols=135  Identities=21%  Similarity=0.154  Sum_probs=100.9

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~p   84 (231)
                      .||||||+||+++.++.+||+|||++...............++..|+|||.+.+..++.++||||+|++++++++ |..|
T Consensus       133 ~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p  212 (288)
T 3kfa_A          133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP  212 (288)
T ss_dssp             CCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCS
T ss_pred             cCCCCCcceEEEcCCCCEEEccCccceeccCCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence            599999999999999999999999998765433322333456778999999988889999999999999999999 8999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |.......                                       +.....             .......+......
T Consensus       213 ~~~~~~~~---------------------------------------~~~~~~-------------~~~~~~~~~~~~~~  240 (288)
T 3kfa_A          213 YPGIDLSQ---------------------------------------VYELLE-------------KDYRMERPEGCPEK  240 (288)
T ss_dssp             STTCCGGG---------------------------------------HHHHHH-------------TTCCCCCCTTCCHH
T ss_pred             CCCCCHHH---------------------------------------HHHHHh-------------ccCCCCCCCCCCHH
Confidence            86543221                                       111110             00011111122345


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      +.+++..||+.||++|||+.++++.|..
T Consensus       241 l~~li~~~l~~dp~~Rps~~~~~~~l~~  268 (288)
T 3kfa_A          241 VYELMRACWQWNPSDRPSFAEIHQAFET  268 (288)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHHHHhCCChhhCcCHHHHHHHHHH
Confidence            7889999999999999999999998875

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.88  E-value=9.3e-24  Score=170.18  Aligned_cols=138  Identities=17%  Similarity=0.176  Sum_probs=90.7

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhh----hhCCCCCCcccHhHHHHHHHHHh
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYI----STGRVSKELDVFSFRVVALEIAT   80 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~----~~~~~~~~~Dv~s~G~vl~el~~   80 (231)
                      -.||||||+||+++.++.+||+|||++......  .......|+..|+|||.+    ....++.++||||+|++++++++
T Consensus       131 i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~  208 (290)
T 3fme_A          131 VIHRDVKPSNVLINALGQVKMCDFGISGYLVDD--VAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAI  208 (290)
T ss_dssp             CCCCCCSGGGCEECTTCCEEBCCC-----------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHH
T ss_pred             eecCCCCHHHEEECCCCCEEEeecCCccccccc--ccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHH
Confidence            359999999999999999999999999765432  122334688999999996    34567889999999999999999


Q ss_pred             CCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHH
Q 045790           81 GRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQ  160 (231)
Q Consensus        81 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  160 (231)
                      |..||......                                        ... ........      .+..   ....
T Consensus       209 g~~p~~~~~~~----------------------------------------~~~-~~~~~~~~------~~~~---~~~~  238 (290)
T 3fme_A          209 LRFPYDSWGTP----------------------------------------FQQ-LKQVVEEP------SPQL---PADK  238 (290)
T ss_dssp             TSCSSCCCSCH----------------------------------------HHH-HHHHHHSC------CCCC---CTTT
T ss_pred             CCCCccccCch----------------------------------------HHH-HHHHhccC------CCCc---cccc
Confidence            99999642210                                        001 11111000      0000   0011


Q ss_pred             HHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          161 QMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       161 ~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      ....+.+++.+||+.||++|||+.|+++|+++..
T Consensus       239 ~~~~~~~li~~~l~~~p~~Rpt~~e~l~hp~f~~  272 (290)
T 3fme_A          239 FSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTL  272 (290)
T ss_dssp             SCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHH
T ss_pred             CCHHHHHHHHHHhhcChhhCcCHHHHHhCccccc
Confidence            2245788999999999999999999999999864

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.88  E-value=4e-23  Score=171.18  Aligned_cols=144  Identities=18%  Similarity=0.145  Sum_probs=101.7

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+|||++.++.+||+|||+++..... .......+|++.|+|||++.+..++.++|+||+||++++|++|..||
T Consensus       132 vHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf  210 (345)
T 3a8x_A          132 IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP-GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF  210 (345)
T ss_dssp             BCCCCCGGGEEECTTSCEEECCGGGCBCSCCT-TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTT
T ss_pred             eecCCCHHHEEECCCCCEEEEeccccccccCC-CCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCc
Confidence            59999999999999999999999999753321 12234568999999999998888999999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      .......                                  ...........+......      ..+    +......+
T Consensus       211 ~~~~~~~----------------------------------~~~~~~~~~~~~~i~~~~------~~~----p~~~s~~~  246 (345)
T 3a8x_A          211 DIVGSSD----------------------------------NPDQNTEDYLFQVILEKQ------IRI----PRSLSVKA  246 (345)
T ss_dssp             TTTTC-----------------------------------------CHHHHHHHHHHCC------CCC----CTTSCHHH
T ss_pred             CCccccc----------------------------------ccccccHHHHHHHHHcCC------CCC----CCCCCHHH
Confidence            6422100                                  000011111111111110      111    11223456


Q ss_pred             HHHHHhhcCCCCCCCCCH------HHHHHHHhccc
Q 045790          166 LIVGLWCAHPDRCFRPSI------RQAIQVLNFET  194 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps~------~ell~~l~~~~  194 (231)
                      ..++.+||+.||++||++      .++++|++|..
T Consensus       247 ~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~f~~  281 (345)
T 3a8x_A          247 ASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN  281 (345)
T ss_dssp             HHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGGGTT
T ss_pred             HHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCccCC
Confidence            788999999999999995      89999999864

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.88  E-value=7e-23  Score=167.10  Aligned_cols=139  Identities=20%  Similarity=0.167  Sum_probs=94.3

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCC--ceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGP--KTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~   83 (231)
                      .||||||+||+++.++.+||+|||++.........  ......|+..|+|||++.+..++.++||||+|+++|+|++|..
T Consensus       138 vH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~  217 (311)
T 3ork_A          138 IHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEP  217 (311)
T ss_dssp             CCCCCCGGGEEEETTSCEEECCCSCC------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSC
T ss_pred             CcCCCCHHHEEEcCCCCEEEeeccCcccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCC
Confidence            59999999999999999999999999766432221  1234568999999999988889999999999999999999999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchh-hhhhcccccCcccHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKL-LSAANERLDSRFDEQQM  162 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~  162 (231)
                      ||........                                          ..+....... .....+        ...
T Consensus       218 pf~~~~~~~~------------------------------------------~~~~~~~~~~~~~~~~~--------~~~  247 (311)
T 3ork_A          218 PFTGDSPVSV------------------------------------------AYQHVREDPIPPSARHE--------GLS  247 (311)
T ss_dssp             SCCCSSHHHH------------------------------------------HHHHHHCCCCCHHHHST--------TCC
T ss_pred             CCCCCChHHH------------------------------------------HHHHhcCCCCCcccccC--------CCC
Confidence            9975442211                                          1111100000 000000        112


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      ..+..++.+||+.||++||++.+++++.....
T Consensus       248 ~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~  279 (311)
T 3ork_A          248 ADLDAVVLKALAKNPENRYQTAAEMRADLVRV  279 (311)
T ss_dssp             HHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence            45678999999999999999999888877754

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.88  E-value=1.3e-23  Score=172.74  Aligned_cols=137  Identities=20%  Similarity=0.150  Sum_probs=99.7

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCc-eeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPK-TIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~   83 (231)
                      .||||||+||+++.++.+||+|||++.......... .....++..|+|||.+.+..++.++||||+|+++++|++ |..
T Consensus       186 vH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~  265 (333)
T 2i1m_A          186 IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLN  265 (333)
T ss_dssp             ECSCCSGGGCEEEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCC
T ss_pred             ccCCcccceEEECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCC
Confidence            599999999999999999999999997654332221 223456778999999988889999999999999999998 889


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||......                                      ..+...+..             ......+.....
T Consensus       266 p~~~~~~~--------------------------------------~~~~~~~~~-------------~~~~~~~~~~~~  294 (333)
T 2i1m_A          266 PYPGILVN--------------------------------------SKFYKLVKD-------------GYQMAQPAFAPK  294 (333)
T ss_dssp             SSTTCCSS--------------------------------------HHHHHHHHH-------------TCCCCCCTTCCH
T ss_pred             CCcccchh--------------------------------------HHHHHHHhc-------------CCCCCCCCCCCH
Confidence            98643211                                      111111110             000011111234


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhcc
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNFE  193 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~~  193 (231)
                      .+..++..||+.||.+|||+.+|+++|...
T Consensus       295 ~l~~li~~~l~~~p~~Rps~~~l~~~L~~~  324 (333)
T 2i1m_A          295 NIYSIMQACWALEPTHRPTFQQICSFLQEQ  324 (333)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHhccChhhCcCHHHHHHHHHHH
Confidence            577899999999999999999999998753

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.88  E-value=1e-22  Score=168.38  Aligned_cols=177  Identities=14%  Similarity=0.011  Sum_probs=109.8

Q ss_pred             eecCCCCCCeee-------------------CCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCc
Q 045790            6 YSRSPELPPGRG-------------------DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKEL   66 (231)
Q Consensus         6 ~~rdlk~~nil~-------------------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~   66 (231)
                      .||||||+|||+                   +.++.+||+|||++......    .....|+..|+|||++.+..++.++
T Consensus       145 vH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~  220 (355)
T 2eu9_A          145 THTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEH----HTTIVATRHYRPPEVILELGWAQPC  220 (355)
T ss_dssp             ECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCCCEEECCCTTCEETTSC----CCSSCSCGGGCCHHHHTTCCCCTHH
T ss_pred             ccCCCCHHHEEEecccccccccccccccccccCCCcEEEeecCcccccccc----ccCCcCCCcccCCeeeecCCCCCcc
Confidence            599999999999                   56789999999999765432    2334689999999999888899999


Q ss_pred             ccHhHHHHHHHHHhCCCccccchhhhhhhhccccCCCCCCccccccccccchhhccC-CCCCCCchhHHHHHHHhhcchh
Q 045790           67 DVFSFRVVALEIATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGG-SSKNYCPKLVAWVWDLYGERKL  145 (231)
Q Consensus        67 Dv~s~G~vl~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  145 (231)
                      ||||+|+++++|++|..||...........+.......+.........  ......+ ..-........+.....     
T Consensus       221 Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-----  293 (355)
T 2eu9_A          221 DVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRK--QKYFYKGGLVWDENSSDGRYVKENC-----  293 (355)
T ss_dssp             HHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHCSC--GGGEETTEECCCTTSHHHHHHHHHC-----
T ss_pred             chHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCcHHHhhhccc--hhhhcccccccccccchhccccccC-----
Confidence            999999999999999999987554333222221111111100000000  0000000 00000011111111100     


Q ss_pred             hhhhcccccCcccHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          146 LSAANERLDSRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       146 ~~~~~~~l~~~~~~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                      .. ....  ..........+.+|+.+||+.||++|||+.|+++|+++....
T Consensus       294 ~~-~~~~--~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~  341 (355)
T 2eu9_A          294 KP-LKSY--MLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGLT  341 (355)
T ss_dssp             CC-GGGG--CSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGCC
T ss_pred             Cc-cccc--ccccchhHHHHHHHHHHHhcCChhhCcCHHHHhcChhhcCCC
Confidence            00 0000  111224456788999999999999999999999999998654

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.88  E-value=4.3e-24  Score=175.43  Aligned_cols=152  Identities=21%  Similarity=0.104  Sum_probs=104.1

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCc--eeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPK--TIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~   83 (231)
                      .||||||+||+++.++.+||+|||++..........  .....++..|+|||.+.+..++.++||||+|++++++++|..
T Consensus       149 vH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~  228 (327)
T 3lxl_A          149 VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCD  228 (327)
T ss_dssp             ECSCCSGGGEEEEETTEEEECCGGGCEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTC
T ss_pred             cCCCCChhhEEECCCCCEEEcccccceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCC
Confidence            599999999999999999999999998765332211  123456778999999988888999999999999999999999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||............. .                          ...........          ..........+.....
T Consensus       229 p~~~~~~~~~~~~~~-~--------------------------~~~~~~~~~~~----------~~~~~~~~~~~~~~~~  271 (327)
T 3lxl_A          229 KSCSPSAEFLRMMGC-E--------------------------RDVPALSRLLE----------LLEEGQRLPAPPACPA  271 (327)
T ss_dssp             GGGSHHHHHHHHCC-------------------------------CCHHHHHHH----------HHHTTCCCCCCTTCCH
T ss_pred             CCccccchhhhhccc-c--------------------------cccccHHHHHH----------HhhcccCCCCCCcccH
Confidence            997644221000000 0                          00011111111          1111111222223345


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      .+.+++.+||+.||++|||+.+|+++|+...
T Consensus       272 ~l~~li~~~l~~dP~~Rps~~ell~~L~~~~  302 (327)
T 3lxl_A          272 EVHELMKLCWAPSPQDRPSFSALGPQLDMLW  302 (327)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHC-
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            6788999999999999999999999998653

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.88  E-value=4.7e-23  Score=171.82  Aligned_cols=137  Identities=17%  Similarity=0.080  Sum_probs=99.8

Q ss_pred             eecCCCCCCeeeCCC---CcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCC
Q 045790            6 YSRSPELPPGRGDFN---FNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGR   82 (231)
Q Consensus         6 ~~rdlk~~nil~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~   82 (231)
                      .||||||+|||++.+   +.+||+|||++.......  ......|++.|+|||++.+..++.++||||+||++|+|++|.
T Consensus       150 vH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~  227 (362)
T 2bdw_A          150 VHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE--AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGY  227 (362)
T ss_dssp             BCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCC--SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred             EeccCchHHEEEecCCCCCCEEEeecCcceEecCCc--ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCC
Confidence            599999999999864   459999999997765322  223457899999999998888999999999999999999999


Q ss_pred             CccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           83 KVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        83 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      .||...........+.....                                         ..   ..+..     ....
T Consensus       228 ~Pf~~~~~~~~~~~i~~~~~-----------------------------------------~~---~~~~~-----~~~~  258 (362)
T 2bdw_A          228 PPFWDEDQHRLYAQIKAGAY-----------------------------------------DY---PSPEW-----DTVT  258 (362)
T ss_dssp             CSSCCSSHHHHHHHHHHTCC-----------------------------------------CC---CTTGG-----GGSC
T ss_pred             CCCCCCCHHHHHHHHHhCCC-----------------------------------------CC---Ccccc-----cCCC
Confidence            99975443211111110000                                         00   00000     0112


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHhcc
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLNFE  193 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~  193 (231)
                      ..+.+++.+||+.||++|||+.++++|+++.
T Consensus       259 ~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~  289 (362)
T 2bdw_A          259 PEAKSLIDSMLTVNPKKRITADQALKVPWIC  289 (362)
T ss_dssp             HHHHHHHHHHSCSSGGGSCCHHHHTTSHHHH
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHhcCcccC
Confidence            3467899999999999999999999999874

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.88  E-value=2.8e-23  Score=173.08  Aligned_cols=145  Identities=18%  Similarity=0.080  Sum_probs=93.4

Q ss_pred             eecCCCCCCeeeCCCCc--EEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCC-cccHhHHHHHHHHHhCC
Q 045790            6 YSRSPELPPGRGDFNFN--AKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKE-LDVFSFRVVALEIATGR   82 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~--~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~-~Dv~s~G~vl~el~~g~   82 (231)
                      .||||||+||+++.++.  +||+|||+++.....  .......|++.|+|||++.+..+..+ +||||+||++++|++|+
T Consensus       138 vH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~  215 (361)
T 3uc3_A          138 CHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH--SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGA  215 (361)
T ss_dssp             CSCCCCGGGEEECSSSSCCEEECCCCCC-----------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSS
T ss_pred             ccCCCCHHHEEEcCCCCceEEEeecCcccccccc--CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCC
Confidence            59999999999987665  999999998753221  12234578999999999987777555 89999999999999999


Q ss_pred             CccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           83 KVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        83 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      .||......                                      .............         ...........
T Consensus       216 ~Pf~~~~~~--------------------------------------~~~~~~~~~~~~~---------~~~~~~~~~~s  248 (361)
T 3uc3_A          216 YPFEDPEEP--------------------------------------RDYRKTIQRILSV---------KYSIPDDIRIS  248 (361)
T ss_dssp             CSCC----C--------------------------------------CCHHHHHHHHHTT---------CCCCCTTSCCC
T ss_pred             CCCCCCccH--------------------------------------HHHHHHHHHHhcC---------CCCCCCcCCCC
Confidence            999754311                                      0111111111100         00000000112


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCCCCC
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTMPNL  199 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~~~~  199 (231)
                      ..+.+|+.+||+.||++|||+.||++|+++....+..
T Consensus       249 ~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~~~~~  285 (361)
T 3uc3_A          249 PECCHLISRIFVADPATRISIPEIKTHSWFLKNLPAD  285 (361)
T ss_dssp             HHHHHHHHHHSCSCTTTSCCHHHHHTSHHHHTTCCCC
T ss_pred             HHHHHHHHHHccCChhHCcCHHHHHhCcchhcCCchh
Confidence            4567899999999999999999999999997665443

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.88  E-value=5.4e-23  Score=169.51  Aligned_cols=146  Identities=18%  Similarity=0.105  Sum_probs=99.6

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCC---ceeEeeccccccchhhhhhCC------CCCCcccHhHHHHHH
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGP---KTIMLVGTLAYMASEYISTGR------VSKELDVFSFRVVAL   76 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~---~~~~~~g~~~y~aPE~~~~~~------~~~~~Dv~s~G~vl~   76 (231)
                      .||||||+||+++.++.+||+|||++.........   ......|+..|+|||.+.+..      ++.++||||+|+++|
T Consensus       169 vH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~  248 (342)
T 1b6c_B          169 AHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFW  248 (342)
T ss_dssp             ECSCCSGGGEEECTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHH
T ss_pred             eeCCCCHHHEEECCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHH
Confidence            59999999999999999999999999776533221   113346889999999986642      225799999999999


Q ss_pred             HHHhC----------CCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhh
Q 045790           77 EIATG----------RKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLL  146 (231)
Q Consensus        77 el~~g----------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (231)
                      +|++|          ..||....                                     ........+..... ..   
T Consensus       249 el~tg~~~~~~~~~~~~p~~~~~-------------------------------------~~~~~~~~~~~~~~-~~---  287 (342)
T 1b6c_B          249 EIARRCSIGGIHEDYQLPYYDLV-------------------------------------PSDPSVEEMRKVVC-EQ---  287 (342)
T ss_dssp             HHHTTBCBTTBCCCCCCTTTTTS-------------------------------------CSSCCHHHHHHHHT-TS---
T ss_pred             HHHhccCcCCcccccccCccccC-------------------------------------cCcccHHHHHHHHH-HH---
Confidence            99999          44543221                                     11111222221111 01   


Q ss_pred             hhhcccccCc-ccHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcc
Q 045790          147 SAANERLDSR-FDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFE  193 (231)
Q Consensus       147 ~~~~~~l~~~-~~~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~  193 (231)
                       ...+.+... ........+.+++.+||+.||++|||+.+|+++|...
T Consensus       288 -~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i  334 (342)
T 1b6c_B          288 -KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL  334 (342)
T ss_dssp             -CCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred             -HhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHH
Confidence             011111111 1235567789999999999999999999999999864

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.88  E-value=2.6e-23  Score=171.44  Aligned_cols=139  Identities=19%  Similarity=0.240  Sum_probs=95.1

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCc--eeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPK--TIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GR   82 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~   82 (231)
                      +||||||+||+++.++.+||+|||++..........  .....++..|+|||.+.+..++.++||||+|++++++++ |.
T Consensus       169 vH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~  248 (333)
T 1mqb_A          169 VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGE  248 (333)
T ss_dssp             CCSCCCGGGEEECTTCCEEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred             eCCCCChheEEECCCCcEEECCCCcchhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCC
Confidence            599999999999999999999999998764322111  122345678999999988889999999999999999998 99


Q ss_pred             CccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           83 KVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        83 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      .||...........+                                          . ..         .....+....
T Consensus       249 ~pf~~~~~~~~~~~~------------------------------------------~-~~---------~~~~~~~~~~  276 (333)
T 1mqb_A          249 RPYWELSNHEVMKAI------------------------------------------N-DG---------FRLPTPMDCP  276 (333)
T ss_dssp             CTTTTCCHHHHHHHH------------------------------------------H-TT---------CCCCCCTTCB
T ss_pred             CCcccCCHHHHHHHH------------------------------------------H-CC---------CcCCCcccCC
Confidence            999654322111100                                          0 00         0001111223


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                      ..+..++.+||+.||++||++.+++++|......
T Consensus       277 ~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~  310 (333)
T 1mqb_A          277 SAIYQLMMQCWQQERARRPKFADIVSILDKLIRA  310 (333)
T ss_dssp             HHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence            4577899999999999999999999999875433

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.88  E-value=2.3e-23  Score=169.73  Aligned_cols=136  Identities=19%  Similarity=0.106  Sum_probs=99.7

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCc-eeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CC
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPK-TIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GR   82 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~   82 (231)
                      -.||||||+||+++.++.+||+|||++.......... .....++..|+|||.+.+..++.++||||+|+++++|++ |.
T Consensus       171 ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~  250 (314)
T 2ivs_A          171 LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGG  250 (314)
T ss_dssp             EECCCCSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSC
T ss_pred             CcccccchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCC
Confidence            3599999999999999999999999997664322111 123346678999999988888999999999999999999 99


Q ss_pred             CccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           83 KVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        83 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      .||.......                                       +...+.    ..         .....+....
T Consensus       251 ~p~~~~~~~~---------------------------------------~~~~~~----~~---------~~~~~~~~~~  278 (314)
T 2ivs_A          251 NPYPGIPPER---------------------------------------LFNLLK----TG---------HRMERPDNCS  278 (314)
T ss_dssp             CSSTTCCGGG---------------------------------------HHHHHH----TT---------CCCCCCTTCC
T ss_pred             CCCCCCCHHH---------------------------------------HHHHhh----cC---------CcCCCCccCC
Confidence            9996543221                                       111110    00         0001111223


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      ..+.+++.+||+.||++|||+.+|+++|..
T Consensus       279 ~~~~~li~~~l~~dp~~Rps~~~l~~~l~~  308 (314)
T 2ivs_A          279 EEMYRLMLQCWKQEPDKRPVFADISKDLEK  308 (314)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence            457889999999999999999999999875

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.88  E-value=7e-23  Score=170.05  Aligned_cols=138  Identities=20%  Similarity=0.098  Sum_probs=99.9

Q ss_pred             eecCCCCCCeeeCCCCc---EEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCC
Q 045790            6 YSRSPELPPGRGDFNFN---AKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGR   82 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~---~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~   82 (231)
                      .||||||+|||++.++.   +||+|||++....... .......|++.|+|||++.+..++.++||||+||++++|++|.
T Consensus       152 vHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~  230 (351)
T 3c0i_A          152 IHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESG-LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGC  230 (351)
T ss_dssp             ECSCCSGGGEEECSSSTTCCEEECCCTTCEECCTTS-CBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSS
T ss_pred             eeccCChHHeEEecCCCCCcEEEecCcceeEecCCC-eeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCC
Confidence            59999999999986554   9999999998765322 1233457899999999998888999999999999999999999


Q ss_pred             CccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           83 KVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        83 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      .||...... ...                                          ...... ..  ..+....    ...
T Consensus       231 ~pf~~~~~~-~~~------------------------------------------~i~~~~-~~--~~~~~~~----~~s  260 (351)
T 3c0i_A          231 LPFYGTKER-LFE------------------------------------------GIIKGK-YK--MNPRQWS----HIS  260 (351)
T ss_dssp             CSSCSSHHH-HHH------------------------------------------HHHHTC-CC--CCHHHHT----TSC
T ss_pred             CCCCCcHHH-HHH------------------------------------------HHHcCC-CC--CCccccc----cCC
Confidence            999753311 000                                          000000 00  0000000    112


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      ..+.+++.+||+.||++|||+.++++|+++..
T Consensus       261 ~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~  292 (351)
T 3c0i_A          261 ESAKDLVRRMLMLDPAERITVYEALNHPWLKE  292 (351)
T ss_dssp             HHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHT
T ss_pred             HHHHHHHHHHCCCChhHCcCHHHHhcChhhcC
Confidence            35678999999999999999999999999854

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.88  E-value=1.8e-22  Score=162.92  Aligned_cols=136  Identities=20%  Similarity=0.214  Sum_probs=98.9

Q ss_pred             eeecCCCCCCeeeC-CCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCC
Q 045790            5 AYSRSPELPPGRGD-FNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRK   83 (231)
Q Consensus         5 ~~~rdlk~~nil~~-~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~   83 (231)
                      -+||||||+||+++ .++.+||+|||++.....   .......|+..|+|||.+. ..++.++||||+|++++++++|..
T Consensus       152 i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~---~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~  227 (290)
T 1t4h_A          152 IIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA---SFAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEY  227 (290)
T ss_dssp             CCCSCCCGGGEEESSTTSCEEECCTTGGGGCCT---TSBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred             EEECCCCHHHEEEECCCCCEEEeeCCCcccccc---cccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCC
Confidence            46999999999998 788999999999876432   2234557899999999885 458999999999999999999999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||......                                         ............ .    ...    +.....
T Consensus       228 pf~~~~~~-----------------------------------------~~~~~~~~~~~~-~----~~~----~~~~~~  257 (290)
T 1t4h_A          228 PYSECQNA-----------------------------------------AQIYRRVTSGVK-P----ASF----DKVAIP  257 (290)
T ss_dssp             TTTTCSSH-----------------------------------------HHHHHHHTTTCC-C----GGG----GGCCCH
T ss_pred             CCCCcCcH-----------------------------------------HHHHHHHhccCC-c----ccc----CCCCCH
Confidence            99643211                                         111111110000 0    001    111123


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      .+.+++..||+.||++|||+.+|++|+++..
T Consensus       258 ~l~~li~~~l~~dp~~Rps~~ell~h~~f~~  288 (290)
T 1t4h_A          258 EVKEIIEGCIRQNKDERYSIKDLLNHAFFQE  288 (290)
T ss_dssp             HHHHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred             HHHHHHHHHccCChhhCCCHHHHhhCccccc
Confidence            5788999999999999999999999999865

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.88  E-value=1.2e-23  Score=173.21  Aligned_cols=162  Identities=17%  Similarity=0.107  Sum_probs=101.1

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCC-------ceeEeeccccccchhhhhh-------CCCCCCcccHh
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGP-------KTIMLVGTLAYMASEYIST-------GRVSKELDVFS   70 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~-------~~~~~~g~~~y~aPE~~~~-------~~~~~~~Dv~s   70 (231)
                      -.||||||+|||++.++.+||+|||+++.+......       ......|+..|+|||++.+       ..++.++||||
T Consensus       141 ivH~Dikp~Nill~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~Diws  220 (336)
T 3g2f_A          141 ISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYA  220 (336)
T ss_dssp             EECSSCSGGGEEECTTSCEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHH
T ss_pred             eeecccccceEEEcCCCcEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHH
Confidence            459999999999999999999999999876532211       1123468999999999865       23556799999


Q ss_pred             HHHHHHHHHhCCCccccchhh-hhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhh
Q 045790           71 FRVVALEIATGRKVINRYKAQ-KLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAA  149 (231)
Q Consensus        71 ~G~vl~el~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (231)
                      +||++|+|++|..||...... .....+...                    .     ........+. ...........+
T Consensus       221 lG~il~ell~g~~p~~~~~~~~~~~~~~~~~--------------------~-----~~~~~~~~~~-~~~~~~~~~~~~  274 (336)
T 3g2f_A          221 LGLIYWEIFMRCTDLFPGESVPEYQMAFQTE--------------------V-----GNHPTFEDMQ-VLVSREKQRPKF  274 (336)
T ss_dssp             HHHHHHHHHTTBGGGSTTSCCCCCCCTTHHH--------------------H-----CSSCCHHHHH-HHHTTSCCCCCC
T ss_pred             HHHHHHHHHhcCCcCCCccchhHHHHhhhcc--------------------c-----CCCchHHHHH-hhhcccccCCCC
Confidence            999999999998776532210 000000000                    0     0000111111 111111111111


Q ss_pred             cccccCcccHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          150 NERLDSRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       150 ~~~l~~~~~~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      ....  .........+.+++.+||+.||++|||+.||++.|....
T Consensus       275 ~~~~--~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll  317 (336)
T 3g2f_A          275 PEAW--KENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELM  317 (336)
T ss_dssp             CTTC--CCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred             Cccc--ccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHH
Confidence            1111  011235567899999999999999999999999888744

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.88  E-value=3.4e-23  Score=167.53  Aligned_cols=152  Identities=17%  Similarity=0.121  Sum_probs=99.2

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCc--eeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPK--TIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~   83 (231)
                      .||||||+||+++.++.+||+|||++..........  .....++..|+|||.+.+..++.++||||+|++++++++|..
T Consensus       136 vH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~  215 (295)
T 3ugc_A          136 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE  215 (295)
T ss_dssp             CCSCCSGGGEEEEETTEEEECCCCSCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTC
T ss_pred             ccCCCCHhhEEEcCCCeEEEccCcccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhccc
Confidence            599999999999999999999999998764322111  122345667999999998899999999999999999999999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      |+...... ...... ..                         ..............         ........+.....
T Consensus       216 ~~~~~~~~-~~~~~~-~~-------------------------~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~  259 (295)
T 3ugc_A          216 KSKSPPAE-FMRMIG-ND-------------------------KQGQMIVFHLIELL---------KNNGRLPRPDGCPD  259 (295)
T ss_dssp             TTCSHHHH-HHHHHC-TT-------------------------CCTHHHHHHHHHHH---------HTTCCCCCCTTCCH
T ss_pred             ccCCChHH-HHhhhc-Cc-------------------------cccchhHHHHHHHH---------hccCcCCCCcCcCH
Confidence            88654321 000000 00                         00011111111111         11111112223345


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhcc
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNFE  193 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~~  193 (231)
                      .+.+++.+||+.||++|||+.+|++.|...
T Consensus       260 ~l~~li~~~l~~dp~~Rps~~el~~~L~~l  289 (295)
T 3ugc_A          260 EIYMIMTECWNNNVNQRPSFRDLALRVDQI  289 (295)
T ss_dssp             HHHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence            678899999999999999999999998764

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.88  E-value=6.6e-23  Score=171.11  Aligned_cols=138  Identities=19%  Similarity=0.188  Sum_probs=99.7

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhC------CCCCCcccHhHHHHHHHH
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTG------RVSKELDVFSFRVVALEI   78 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~------~~~~~~Dv~s~G~vl~el   78 (231)
                      -+||||||.||+++.++.+||+|||++..+....  ......|+..|+|||++.+.      .++.++||||+|+++|+|
T Consensus       221 i~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el  298 (365)
T 2y7j_A          221 IVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGE--KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTL  298 (365)
T ss_dssp             EECSCCSGGGEEECTTCCEEECCCTTCEECCTTC--CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHH
T ss_pred             eecCCCCHHHEEECCCCCEEEEecCcccccCCCc--ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHH
Confidence            3699999999999999999999999987765322  22345789999999998643      478899999999999999


Q ss_pred             HhCCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCccc
Q 045790           79 ATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFD  158 (231)
Q Consensus        79 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  158 (231)
                      ++|..||...........+.                                       .    .... ...+.. .   
T Consensus       299 l~g~~pf~~~~~~~~~~~i~---------------------------------------~----~~~~-~~~~~~-~---  330 (365)
T 2y7j_A          299 LAGSPPFWHRRQILMLRMIM---------------------------------------E----GQYQ-FSSPEW-D---  330 (365)
T ss_dssp             HHSSCSSCCSSHHHHHHHHH---------------------------------------H----TCCC-CCHHHH-S---
T ss_pred             HHCCCCCCCCCHHHHHHHHH---------------------------------------h----CCCC-CCCccc-c---
Confidence            99999996543221111000                                       0    0000 000000 0   


Q ss_pred             HHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcc
Q 045790          159 EQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFE  193 (231)
Q Consensus       159 ~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~  193 (231)
                       .....+.+++.+||+.||++|||+.++++|+++.
T Consensus       331 -~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~f~  364 (365)
T 2y7j_A          331 -DRSSTVKDLISRLLQVDPEARLTAEQALQHPFFE  364 (365)
T ss_dssp             -SSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGC
T ss_pred             -cCCHHHHHHHHHHcCCChhHCcCHHHHhcCcccC
Confidence             0123467899999999999999999999999985

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.88  E-value=2.7e-23  Score=174.00  Aligned_cols=139  Identities=16%  Similarity=0.040  Sum_probs=101.9

Q ss_pred             eeecCCCCCCeee--CCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCC
Q 045790            5 AYSRSPELPPGRG--DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGR   82 (231)
Q Consensus         5 ~~~rdlk~~nil~--~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~   82 (231)
                      -+||||||+|||+  +.++.+||+|||+++......  ......|++.|+|||++.+..++.++||||+||++++|++|.
T Consensus       208 ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~  285 (373)
T 2x4f_A          208 ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE--KLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGL  285 (373)
T ss_dssp             EECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC--BCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSS
T ss_pred             cccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc--ccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCC
Confidence            3599999999999  567889999999998765322  223446899999999998888899999999999999999999


Q ss_pred             CccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           83 KVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        83 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      .||...........+.....                                         .    .......    ...
T Consensus       286 ~pf~~~~~~~~~~~i~~~~~-----------------------------------------~----~~~~~~~----~~~  316 (373)
T 2x4f_A          286 SPFLGDNDAETLNNILACRW-----------------------------------------D----LEDEEFQ----DIS  316 (373)
T ss_dssp             CTTCCSSHHHHHHHHHHTCC-----------------------------------------C----SCSGGGT----TSC
T ss_pred             CCCCCCCHHHHHHHHHhccC-----------------------------------------C----CChhhhc----cCC
Confidence            99976543211111110000                                         0    0000001    112


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      ..+.+|+.+||+.||++|||+.|+++|+++..
T Consensus       317 ~~~~~li~~~L~~dp~~Rps~~e~l~hp~~~~  348 (373)
T 2x4f_A          317 EEAKEFISKLLIKEKSWRISASEALKHPWLSD  348 (373)
T ss_dssp             HHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHC
T ss_pred             HHHHHHHHHHcCCChhhCCCHHHHhcCcCcCC
Confidence            45678999999999999999999999999854

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.88  E-value=3.8e-23  Score=178.02  Aligned_cols=137  Identities=20%  Similarity=0.184  Sum_probs=102.8

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCC-CCCcccHhHHHHHHHHHhCCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRV-SKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      .||||||+|||++.++.+||+|||++.......  .....+|++.|+|||++.+..+ +.++||||+||++++|++|..|
T Consensus       138 vHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~P  215 (476)
T 2y94_A          138 VHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE--FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLP  215 (476)
T ss_dssp             ECSCCSGGGEEECTTCCEEECCCSSCEECCTTC--CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCS
T ss_pred             CcccccHHHEEEecCCCeEEEeccchhhccccc--cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCC
Confidence            599999999999999999999999998765322  2344578999999999987665 6789999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |........                                          ........       ...    +......
T Consensus       216 f~~~~~~~~------------------------------------------~~~i~~~~-------~~~----p~~~s~~  242 (476)
T 2y94_A          216 FDDDHVPTL------------------------------------------FKKICDGI-------FYT----PQYLNPS  242 (476)
T ss_dssp             SCCSSSHHH------------------------------------------HHHHHTTC-------CCC----CTTCCHH
T ss_pred             CCCCCHHHH------------------------------------------HHHHhcCC-------cCC----CccCCHH
Confidence            975432211                                          11111000       000    0011234


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhcccCCC
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNFETTMP  197 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~~  197 (231)
                      +.+++.+||+.||++|||+.++++|+++....+
T Consensus       243 ~~~Li~~~L~~dP~~Rpt~~eil~hp~~~~~~~  275 (476)
T 2y94_A          243 VISLLKHMLQVDPMKRATIKDIREHEWFKQDLP  275 (476)
T ss_dssp             HHHHHHHHTCSSTTTSCCHHHHHTCHHHHTTCC
T ss_pred             HHHHHHHHcCCCchhCcCHHHHHhCHHhhhcCc
Confidence            678999999999999999999999999976543

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.87  E-value=1.4e-22  Score=174.71  Aligned_cols=142  Identities=15%  Similarity=0.032  Sum_probs=101.1

Q ss_pred             eecCCCCCCeee---CCCCcEEEeccccccccCCCCCC------ceeEeeccccccchhhhhhCCCCCCcccHhHHHHHH
Q 045790            6 YSRSPELPPGRG---DFNFNAKLGDFGLARLMDHELGP------KTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVAL   76 (231)
Q Consensus         6 ~~rdlk~~nil~---~~~~~~kl~Dfg~~~~~~~~~~~------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~   76 (231)
                      .||||||+|||+   +.++.+||+|||+++........      ......|+..|++||++.+..++.++|||||||++|
T Consensus       125 vHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~  204 (483)
T 3sv0_A          125 LHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLM  204 (483)
T ss_dssp             ECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHH
T ss_pred             eecccCcceEEEecCCCCCeEEEEeCCcceeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHH
Confidence            599999999999   58899999999999876543221      122567899999999998888999999999999999


Q ss_pred             HHHhCCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCc
Q 045790           77 EIATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSR  156 (231)
Q Consensus        77 el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  156 (231)
                      +|++|+.||......                                       .....+..... ........ .+...
T Consensus       205 elltG~~Pf~~~~~~---------------------------------------~~~~~~~~i~~-~~~~~~~~-~l~~~  243 (483)
T 3sv0_A          205 YFLRGSLPWQGLKAG---------------------------------------TKKQKYEKISE-KKVATSIE-ALCRG  243 (483)
T ss_dssp             HHHHSSCTTSSCCCS---------------------------------------SHHHHHHHHHH-HHHHSCHH-HHHTT
T ss_pred             HHHhCCCCCccccch---------------------------------------hHHHHHHHHhh-ccccccHH-HHhcC
Confidence            999999999753311                                       01111111110 00000000 01011


Q ss_pred             ccHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          157 FDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       157 ~~~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      +    ...+..++..||+.||++||++.+|++.|..
T Consensus       244 ~----p~~l~~li~~cl~~dP~~RPs~~el~~~L~~  275 (483)
T 3sv0_A          244 Y----PTEFASYFHYCRSLRFDDKPDYSYLKRLFRD  275 (483)
T ss_dssp             S----CHHHHHHHHHHHTCCTTCCCCHHHHHHHHHH
T ss_pred             C----cHHHHHHHHHHhcCChhhCcCHHHHHHHHHH
Confidence            1    2467889999999999999999999988775

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.87  E-value=1.9e-23  Score=176.88  Aligned_cols=140  Identities=16%  Similarity=0.055  Sum_probs=99.8

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhh-------CCCCCCcccHhHHHHHHHH
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIST-------GRVSKELDVFSFRVVALEI   78 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-------~~~~~~~Dv~s~G~vl~el   78 (231)
                      .||||||+|||++.++.+||+|||+++.............+||+.|+|||++..       ..++.++|+||+||++|||
T Consensus       184 iHrDLKp~NILld~~g~vkL~DFGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyel  263 (412)
T 2vd5_A          184 VHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEM  263 (412)
T ss_dssp             ECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHH
T ss_pred             eecccCHHHeeecCCCCEEEeechhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHH
Confidence            599999999999999999999999998765432222234579999999999863       4578999999999999999


Q ss_pred             HhCCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCccc
Q 045790           79 ATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFD  158 (231)
Q Consensus        79 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  158 (231)
                      ++|..||...........+                                          .....  ....+...    
T Consensus       264 ltG~~Pf~~~~~~~~~~~i------------------------------------------~~~~~--~~~~p~~~----  295 (412)
T 2vd5_A          264 FYGQTPFYADSTAETYGKI------------------------------------------VHYKE--HLSLPLVD----  295 (412)
T ss_dssp             HHSSCTTCCSSHHHHHHHH------------------------------------------HTHHH--HCCCC-------
T ss_pred             HhCCCCCCCCCHHHHHHHH------------------------------------------Hhccc--CcCCCccc----
Confidence            9999999764432111111                                          10000  00001110    


Q ss_pred             HHHHHHHHHHHHhhcCCCCCCC---CCHHHHHHHHhccc
Q 045790          159 EQQMTCLLIVGLWCAHPDRCFR---PSIRQAIQVLNFET  194 (231)
Q Consensus       159 ~~~~~~~~~l~~~c~~~dp~~R---ps~~ell~~l~~~~  194 (231)
                      ......+.+++.+||. +|++|   +++.|+++|++|..
T Consensus       296 ~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpff~~  333 (412)
T 2vd5_A          296 EGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHPFFFG  333 (412)
T ss_dssp             -CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGGGTT
T ss_pred             cCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCCcCC
Confidence            1122456788899999 99998   59999999999954

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.87  E-value=9.6e-23  Score=173.74  Aligned_cols=83  Identities=23%  Similarity=0.201  Sum_probs=64.3

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCC---------------------ceeEeeccccccchhhhh-hCCC
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGP---------------------KTIMLVGTLAYMASEYIS-TGRV   62 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~---------------------~~~~~~g~~~y~aPE~~~-~~~~   62 (231)
                      ..||||||+|||++.++.+||+|||+++........                     .....+||..|+|||++. ...+
T Consensus       150 ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~  229 (432)
T 3n9x_A          150 IIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENY  229 (432)
T ss_dssp             EECCCCCGGGEEECTTCCEEECCCTTCEEC-------------------------------CCCCCTTCCHHHHTTCSCC
T ss_pred             CCCCCCCHHHeEECCCCCEEEccCCCcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCC
Confidence            359999999999999999999999999876432111                     124567899999999864 4568


Q ss_pred             CCCcccHhHHHHHHHHHhCCCcccc
Q 045790           63 SKELDVFSFRVVALEIATGRKVINR   87 (231)
Q Consensus        63 ~~~~Dv~s~G~vl~el~~g~~p~~~   87 (231)
                      +.++||||+||++++|++|..||..
T Consensus       230 ~~~~DiwSlG~il~ell~g~~p~~~  254 (432)
T 3n9x_A          230 TKSIDIWSTGCIFAELLNMLQSHIN  254 (432)
T ss_dssp             CTHHHHHHHHHHHHHHHTTCTTTCS
T ss_pred             CcccccchHHHHHHHHHhccccccc
Confidence            9999999999999999997666543

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.87  E-value=8.1e-23  Score=171.57  Aligned_cols=137  Identities=18%  Similarity=0.159  Sum_probs=101.3

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhh---CCCCCCcccHhHHHHHHHHHhCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIST---GRVSKELDVFSFRVVALEIATGR   82 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~---~~~~~~~Dv~s~G~vl~el~~g~   82 (231)
                      .||||||.|||++.++.+||+|||++......  ......+|++.|+|||++..   ..++.++|+||+||++|+|++|.
T Consensus       137 vHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~--~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~  214 (384)
T 4fr4_A          137 IHRDMKPDNILLDEHGHVHITDFNIAAMLPRE--TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGR  214 (384)
T ss_dssp             ECCCCSGGGEEECTTSCEEECCCTTCEECCTT--CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSS
T ss_pred             eeccCcHHHeEECCCCCEEEeccceeeeccCC--CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCC
Confidence            59999999999999999999999999876432  22345679999999999863   34788999999999999999999


Q ss_pred             CccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           83 KVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        83 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      .||......                                       ............       .    ..++....
T Consensus       215 ~Pf~~~~~~---------------------------------------~~~~~~~~~~~~-------~----~~~p~~~s  244 (384)
T 4fr4_A          215 RPYHIRSST---------------------------------------SSKEIVHTFETT-------V----VTYPSAWS  244 (384)
T ss_dssp             CSSCCCTTS---------------------------------------CHHHHHHHHHHC-------C----CCCCTTSC
T ss_pred             CCCCCCCCc---------------------------------------cHHHHHHHHhhc-------c----cCCCCcCC
Confidence            999643210                                       111111111000       0    01111223


Q ss_pred             HHHHHHHHhhcCCCCCCCCC-HHHHHHHHhccc
Q 045790          163 TCLLIVGLWCAHPDRCFRPS-IRQAIQVLNFET  194 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps-~~ell~~l~~~~  194 (231)
                      ..+..++.+||+.||++||+ +.+|++|+++..
T Consensus       245 ~~~~~li~~lL~~dP~~R~s~~~~l~~hp~f~~  277 (384)
T 4fr4_A          245 QEMVSLLKKLLEPNPDQRFSQLSDVQNFPYMND  277 (384)
T ss_dssp             HHHHHHHHHHSCSSGGGSCCSHHHHHTSGGGTT
T ss_pred             HHHHHHHHHHhcCCHhHhcccHHHHHcChhhhc
Confidence            45788999999999999998 999999999854

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.87  E-value=3.5e-23  Score=173.25  Aligned_cols=135  Identities=16%  Similarity=0.108  Sum_probs=101.3

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+|||++.++.+||+|||+++..... .......+|++.|+|||++.+..++.++|+||+||++|+|++|..||
T Consensus       161 vHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf  239 (373)
T 2r5t_A          161 VYRDLKPENILLDSQGHIVLTDFGLCKENIEH-NSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPF  239 (373)
T ss_dssp             CCCCCCGGGEEECTTSCEEECCCCBCGGGBCC-CCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTT
T ss_pred             eecCCCHHHEEECCCCCEEEeeCccccccccC-CCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCC
Confidence            59999999999999999999999999764321 12234567999999999998888999999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      ...........+                                          ....       ..+...    ....+
T Consensus       240 ~~~~~~~~~~~i------------------------------------------~~~~-------~~~~~~----~~~~~  266 (373)
T 2r5t_A          240 YSRNTAEMYDNI------------------------------------------LNKP-------LQLKPN----ITNSA  266 (373)
T ss_dssp             CCSBHHHHHHHH------------------------------------------HHSC-------CCCCSS----SCHHH
T ss_pred             CCCCHHHHHHHH------------------------------------------Hhcc-------cCCCCC----CCHHH
Confidence            754432111111                                          1000       011111    12346


Q ss_pred             HHHHHhhcCCCCCCCCCH----HHHHHHHhccc
Q 045790          166 LIVGLWCAHPDRCFRPSI----RQAIQVLNFET  194 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps~----~ell~~l~~~~  194 (231)
                      ..++.+||+.||.+||++    .++++|++|..
T Consensus       267 ~~li~~lL~~dp~~R~~~~~~~~~i~~h~~f~~  299 (373)
T 2r5t_A          267 RHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSL  299 (373)
T ss_dssp             HHHHHHHTCSSGGGSTTTTTTHHHHHTSGGGTT
T ss_pred             HHHHHHHcccCHHhCCCCCCCHHHHhCCccccC
Confidence            788999999999999987    68999998853

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.87  E-value=3.3e-23  Score=184.33  Aligned_cols=135  Identities=19%  Similarity=0.112  Sum_probs=98.0

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCC--ceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGP--KTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GR   82 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~   82 (231)
                      .||||||+|||++.++.+||+|||+++.+......  ......++..|+|||++.+..++.++||||+|+++|+|++ |.
T Consensus       491 iHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~  570 (635)
T 4fl3_A          491 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQ  570 (635)
T ss_dssp             CCSCCSGGGEEEEETTEEEECCTTHHHHTTC-------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTC
T ss_pred             eCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCC
Confidence            59999999999999999999999999876533221  1223456778999999998899999999999999999998 99


Q ss_pred             CccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           83 KVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        83 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      .||...........+.                                                    .......+....
T Consensus       571 ~Pf~~~~~~~~~~~i~----------------------------------------------------~~~~~~~p~~~~  598 (635)
T 4fl3_A          571 KPYRGMKGSEVTAMLE----------------------------------------------------KGERMGCPAGCP  598 (635)
T ss_dssp             CSSTTCCHHHHHHHHH----------------------------------------------------TTCCCCCCTTCC
T ss_pred             CCCCCCCHHHHHHHHH----------------------------------------------------cCCCCCCCCCCC
Confidence            9997644321111110                                                    111111122233


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      ..+.+++..||+.||++|||+.+|++.|..
T Consensus       599 ~~l~~li~~cl~~dP~~RPs~~~l~~~L~~  628 (635)
T 4fl3_A          599 REMYDLMNLCWTYDVENRPGFAAVELRLRN  628 (635)
T ss_dssp             HHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence            567889999999999999999999998875

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.87  E-value=3.9e-23  Score=173.03  Aligned_cols=137  Identities=25%  Similarity=0.245  Sum_probs=90.8

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCC---ceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-C
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGP---KTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-G   81 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g   81 (231)
                      .||||||+||+++.++.+||+|||+++........   ......++..|+|||++.+..++.++||||+|+++|++++ |
T Consensus       214 vHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~  293 (373)
T 3c1x_A          214 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG  293 (373)
T ss_dssp             CCSCCCGGGEEECTTCCEEECCC---------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred             ecCccchheEEECCCCCEEEeeccccccccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCc
Confidence            59999999999999999999999999765432211   1223456778999999988889999999999999999999 6


Q ss_pred             CCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHH
Q 045790           82 RKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQ  161 (231)
Q Consensus        82 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  161 (231)
                      ..||......                                       .+...+..   ..          ....+...
T Consensus       294 ~~p~~~~~~~---------------------------------------~~~~~~~~---~~----------~~~~p~~~  321 (373)
T 3c1x_A          294 APPYPDVNTF---------------------------------------DITVYLLQ---GR----------RLLQPEYC  321 (373)
T ss_dssp             CCSCTTSCSS---------------------------------------CHHHHHHT---TC----------CCCCCTTC
T ss_pred             CCCCCCCCHH---------------------------------------HHHHHHHc---CC----------CCCCCCCC
Confidence            6777543211                                       11111100   00          00011112


Q ss_pred             HHHHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          162 MTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       162 ~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      ...+.+++.+||+.||++|||+.+++++|....
T Consensus       322 ~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~  354 (373)
T 3c1x_A          322 PDPLYEVMLKCWHPKAEMRPSFSELVSRISAIF  354 (373)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            245788999999999999999999999998754

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.87  E-value=3.2e-23  Score=170.97  Aligned_cols=137  Identities=20%  Similarity=0.117  Sum_probs=100.4

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCC-CceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELG-PKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~   83 (231)
                      +||||||+||+++.++.+||+|||++........ .......++..|+|||.+.+..++.++||||+|+++|++++ |..
T Consensus       196 vH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~  275 (343)
T 1luf_A          196 VHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQ  275 (343)
T ss_dssp             CCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCC
T ss_pred             ecCCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCC
Confidence            5999999999999999999999999976543221 12234567889999999988889999999999999999998 999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||...........+                                          . ....         ...+.....
T Consensus       276 p~~~~~~~~~~~~~------------------------------------------~-~~~~---------~~~~~~~~~  303 (343)
T 1luf_A          276 PYYGMAHEEVIYYV------------------------------------------R-DGNI---------LACPENCPL  303 (343)
T ss_dssp             TTTTSCHHHHHHHH------------------------------------------H-TTCC---------CCCCTTCCH
T ss_pred             cCCCCChHHHHHHH------------------------------------------h-CCCc---------CCCCCCCCH
Confidence            99754322111111                                          0 0000         001111224


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      .+..++.+||+.||++|||+.+++++|....
T Consensus       304 ~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~  334 (343)
T 1luf_A          304 ELYNLMRLCWSKLPADRPSFCSIHRILQRMC  334 (343)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             HHHHHHHHHcccCcccCCCHHHHHHHHHHHH
Confidence            5788999999999999999999999998754

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.87  E-value=4.5e-23  Score=182.86  Aligned_cols=135  Identities=19%  Similarity=0.134  Sum_probs=97.1

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCc--eeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPK--TIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GR   82 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~   82 (231)
                      .||||||+|||++.++.+||+|||+++.........  .....++..|+|||++.+..++.++|||||||++|||++ |.
T Consensus       458 iHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~  537 (613)
T 2ozo_A          458 VHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQ  537 (613)
T ss_dssp             CCSCCSGGGEEEEETTEEEECCCSTTTTCC--------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred             EcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCC
Confidence            599999999999999999999999998764322111  122345678999999988899999999999999999998 99


Q ss_pred             CccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           83 KVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        83 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      .||......                                       .+...+.             ...+...+....
T Consensus       538 ~Pf~~~~~~---------------------------------------~~~~~i~-------------~~~~~~~p~~~~  565 (613)
T 2ozo_A          538 KPYKKMKGP---------------------------------------EVMAFIE-------------QGKRMECPPECP  565 (613)
T ss_dssp             CTTTTCCSH---------------------------------------HHHHHHH-------------TTCCCCCCTTCC
T ss_pred             CCCCCCCHH---------------------------------------HHHHHHH-------------cCCCCCCCCcCC
Confidence            999754321                                       1111111             011111222234


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      ..+.+++..||+.||++||++.+|++.|..
T Consensus       566 ~~l~~li~~cl~~dP~~RPs~~~l~~~L~~  595 (613)
T 2ozo_A          566 PELYALMSDCWIYKWEDRPDFLTVEQRMRA  595 (613)
T ss_dssp             HHHHHHHHHTTCSSTTTSCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence            567889999999999999999999988775

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.87  E-value=6.7e-23  Score=165.12  Aligned_cols=135  Identities=24%  Similarity=0.271  Sum_probs=97.2

Q ss_pred             eeecCCCCCCeeeCCCCc-----EEEeccccccccCCCCCCceeEeeccccccchhhhh--hCCCCCCcccHhHHHHHHH
Q 045790            5 AYSRSPELPPGRGDFNFN-----AKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIS--TGRVSKELDVFSFRVVALE   77 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~-----~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~--~~~~~~~~Dv~s~G~vl~e   77 (231)
                      -.||||||+||+++.++.     +||+|||+++....    ......|+..|+|||++.  ...++.++||||+|+++++
T Consensus       145 ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~  220 (287)
T 4f0f_A          145 IVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVH----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYT  220 (287)
T ss_dssp             CBCSCCSGGGEEESCCCTTCSCCEEECCCTTCBCCSS----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHH
T ss_pred             eecCCCCcceEEEeccCCCCceeEEeCCCCccccccc----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHH
Confidence            369999999999987766     99999999875432    234467899999999984  3446788999999999999


Q ss_pred             HHhCCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcc
Q 045790           78 IATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRF  157 (231)
Q Consensus        78 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  157 (231)
                      +++|..||......                                       .. .......         ........
T Consensus       221 l~~g~~pf~~~~~~---------------------------------------~~-~~~~~~~---------~~~~~~~~  251 (287)
T 4f0f_A          221 ILTGEGPFDEYSYG---------------------------------------KI-KFINMIR---------EEGLRPTI  251 (287)
T ss_dssp             HHHSSCTTTTCCCC---------------------------------------HH-HHHHHHH---------HSCCCCCC
T ss_pred             HHcCCCCCcccccc---------------------------------------HH-HHHHHHh---------ccCCCCCC
Confidence            99999999643211                                       00 1111100         01111111


Q ss_pred             cHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          158 DEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       158 ~~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      +......+.+++..||+.||++|||+.+|++.|..
T Consensus       252 ~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~  286 (287)
T 4f0f_A          252 PEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSE  286 (287)
T ss_dssp             CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred             CcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence            22223467889999999999999999999999864

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.87  E-value=1.2e-22  Score=167.59  Aligned_cols=137  Identities=20%  Similarity=0.222  Sum_probs=102.8

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      +||||||+||+++.++.+||+|||++....... .......|+..|+|||++.+..++.++||||+|+++++|++|..||
T Consensus       163 vH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf  241 (335)
T 2owb_A          163 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG-ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF  241 (335)
T ss_dssp             ECSCCCGGGEEECTTCCEEECCCTTCEECCSTT-CCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTT
T ss_pred             EecCCCchhEEEcCCCCEEEeeccCceecccCc-ccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCC
Confidence            599999999999999999999999997764322 1223456889999999998888899999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      .......                                          .........       ..+....    ...+
T Consensus       242 ~~~~~~~------------------------------------------~~~~~~~~~-------~~~~~~~----~~~~  268 (335)
T 2owb_A          242 ETSCLKE------------------------------------------TYLRIKKNE-------YSIPKHI----NPVA  268 (335)
T ss_dssp             CCSSHHH------------------------------------------HHHHHHHTC-------CCCCTTS----CHHH
T ss_pred             CCCCHHH------------------------------------------HHHHHhcCC-------CCCCccC----CHHH
Confidence            6543211                                          011110000       0111111    2346


Q ss_pred             HHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          166 LIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                      ..++.+||+.||++|||+.++++|.++....
T Consensus       269 ~~li~~~l~~dp~~Rps~~ell~~~~~~~~~  299 (335)
T 2owb_A          269 ASLIQKMLQTDPTARPTINELLNDEFFTSGY  299 (335)
T ss_dssp             HHHHHHHTCSSGGGSCCGGGGGGSHHHHTSC
T ss_pred             HHHHHHHccCChhHCcCHHHHhcCccccCCC
Confidence            7789999999999999999999999997654

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.87  E-value=1.2e-23  Score=168.76  Aligned_cols=140  Identities=21%  Similarity=0.260  Sum_probs=101.3

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCc
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      -.||||||+||+++.++.+||+|||++....... .......|+..|+|||.+.+..++.++||||+|++++++++|..|
T Consensus       137 ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p  215 (279)
T 2w5a_A          137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDT-SFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPP  215 (279)
T ss_dssp             -CCCCCSGGGEEECSSSCEEECCCCHHHHC---C-HHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCS
T ss_pred             eEEeccchhhEEEcCCCCEEEecCchheeecccc-ccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCC
Confidence            4699999999999999999999999987654321 112234678899999999888889999999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |........                                       ..   ... ....     +.+    +......
T Consensus       216 ~~~~~~~~~---------------------------------------~~---~i~-~~~~-----~~~----~~~~~~~  243 (279)
T 2w5a_A          216 FTAFSQKEL---------------------------------------AG---KIR-EGKF-----RRI----PYRYSDE  243 (279)
T ss_dssp             SCCSSHHHH---------------------------------------HH---HHH-HTCC-----CCC----CTTSCHH
T ss_pred             CcccCHHHH---------------------------------------HH---HHh-hccc-----ccC----CcccCHH
Confidence            975432211                                       11   000 0000     011    1112245


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhcccCCC
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNFETTMP  197 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~~  197 (231)
                      +.+++.+||+.||++|||+.+|++++++....+
T Consensus       244 l~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~~  276 (279)
T 2w5a_A          244 LNEIITRMLNLKDYHRPSVEEILENPLILEHHH  276 (279)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHTSTTCCGGGS
T ss_pred             HHHHHHHHcCCCcccCCCHHHHHhChhhhhhcc
Confidence            678999999999999999999999999876543

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.87  E-value=4.2e-23  Score=171.71  Aligned_cols=169  Identities=17%  Similarity=0.060  Sum_probs=100.1

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhh-CCCCCCcccHhHHHHHHHHHhCCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIST-GRVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      .||||||+||+++.++.+||+|||++......  .......|+..|+|||++.+ ..++.++||||+|++++++++|+.|
T Consensus       156 vH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~p  233 (362)
T 3pg1_A          156 VHRDLHPGNILLADNNDITICDFNLAREDTAD--ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKAL  233 (362)
T ss_dssp             CCCCCCGGGEEECTTCCEEECCTTC-----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             EecCCChHHEEEcCCCCEEEEecCcccccccc--cccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCC
Confidence            59999999999999999999999999754322  22334578889999999876 5689999999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |...........+...............               .......+.    ... .... ...............
T Consensus       234 f~~~~~~~~~~~i~~~~~~~~~~~~~~~---------------~~~~~~~~~----~~~-~~~~-~~~~~~~~~~~~~~~  292 (362)
T 3pg1_A          234 FRGSTFYNQLNKIVEVVGTPKIEDVVMF---------------SSPSARDYL----RNS-LSNV-PARAWTAVVPTADPV  292 (362)
T ss_dssp             CCCSSHHHHHHHHHHHHCCCCHHHHHHT---------------SCHHHHHHT----TTC-CCCC-CCCCHHHHSTTSCHH
T ss_pred             CCCCCHHHHHHHHHHHcCCCChHHhhhc---------------cchhhhHHH----Hhh-cccC-ChhhHHhhCCCCCHH
Confidence            9876544333333221111100000000               000000000    000 0000 000000000111345


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhcccCCC
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNFETTMP  197 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~~  197 (231)
                      +.+++.+||+.||++|||+.|+++|+++.....
T Consensus       293 ~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~  325 (362)
T 3pg1_A          293 ALDLIAKMLEFNPQRRISTEQALRHPYFESLFD  325 (362)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHTSGGGTTTCC
T ss_pred             HHHHHHHHhcCChhhCCCHHHHHcCchhhhccC
Confidence            788999999999999999999999999987643

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.87  E-value=2.4e-23  Score=181.97  Aligned_cols=137  Identities=20%  Similarity=0.153  Sum_probs=100.5

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~p   84 (231)
                      +|||||++|||++.++.+||+|||+++..............++..|+|||++....++.++||||||+++|+|++ |..|
T Consensus       385 vHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P  464 (535)
T 2h8h_A          385 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP  464 (535)
T ss_dssp             CCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCS
T ss_pred             eCCCCCHhhEEEcCCCcEEEcccccceecCCCceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence            599999999999999999999999997654211111122345678999999988889999999999999999999 8999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |......+....                                          +.          ...+...+......
T Consensus       465 ~~~~~~~~~~~~------------------------------------------i~----------~~~~~~~~~~~~~~  492 (535)
T 2h8h_A          465 YPGMVNREVLDQ------------------------------------------VE----------RGYRMPCPPECPES  492 (535)
T ss_dssp             STTCCHHHHHHH------------------------------------------HH----------TTCCCCCCTTCCHH
T ss_pred             CCCCCHHHHHHH------------------------------------------HH----------cCCCCCCCCCCCHH
Confidence            975432211111                                          10          00111111223345


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      +.+|+.+||+.||++|||+.+|++.|+...
T Consensus       493 l~~li~~cl~~dP~~RPt~~~l~~~L~~~~  522 (535)
T 2h8h_A          493 LHDLMCQCWRKEPEERPTFEYLQAFLEDYF  522 (535)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred             HHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence            778999999999999999999999998654

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.87  E-value=3e-23  Score=181.68  Aligned_cols=138  Identities=19%  Similarity=0.129  Sum_probs=103.1

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+|||++.++.+||+|||+++.....  ......+|++.|+|||++.+..++.++|+||+||++++|++|..||
T Consensus       308 vHrDLKPeNILld~~g~vKL~DFGla~~~~~~--~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF  385 (576)
T 2acx_A          308 VYRDLKPENILLDDHGHIRISDLGLAVHVPEG--QTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPF  385 (576)
T ss_dssp             ECCCCCGGGEEECTTSCEEECCCTTCEECCTT--CCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSS
T ss_pred             eccCCchheEEEeCCCCeEEEecccceecccC--ccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCC
Confidence            59999999999999999999999999876432  2234458999999999998888999999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      ......                                   .....+...+   .. .      ...    ++......+
T Consensus       386 ~~~~~~-----------------------------------~~~~~i~~~i---~~-~------~~~----~p~~~s~~~  416 (576)
T 2acx_A          386 QQRKKK-----------------------------------IKREEVERLV---KE-V------PEE----YSERFSPQA  416 (576)
T ss_dssp             SCSSSC-----------------------------------CCHHHHHHHH---HH-C------CCC----CCTTSCHHH
T ss_pred             cccccc-----------------------------------hhHHHHHHHh---hc-c------ccc----CCccCCHHH
Confidence            753210                                   0000111111   00 0      011    111223456


Q ss_pred             HHHHHhhcCCCCCCCC-----CHHHHHHHHhccc
Q 045790          166 LIVGLWCAHPDRCFRP-----SIRQAIQVLNFET  194 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rp-----s~~ell~~l~~~~  194 (231)
                      .+|+.+||+.||.+||     ++.||++|++|..
T Consensus       417 ~dLI~~lL~~dP~~R~g~~~~sa~eil~HpfF~~  450 (576)
T 2acx_A          417 RSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKK  450 (576)
T ss_dssp             HHHHHHHTCSSGGGSTTCSSSHHHHHHTSGGGTT
T ss_pred             HHHHHHhccCCHHHcCCCCCCCHHHHHhChhhcc
Confidence            7889999999999999     8999999999975

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.87  E-value=2.1e-23  Score=171.40  Aligned_cols=138  Identities=15%  Similarity=0.063  Sum_probs=84.5

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCc-----------eeEeeccccccchhhh---hhCCCCCCcccHh
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPK-----------TIMLVGTLAYMASEYI---STGRVSKELDVFS   70 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~-----------~~~~~g~~~y~aPE~~---~~~~~~~~~Dv~s   70 (231)
                      -+||||||+|||++.++.+||+|||++..........           .....|+..|+|||++   .+..++.++||||
T Consensus       159 ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~s  238 (337)
T 3ll6_A          159 IIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWA  238 (337)
T ss_dssp             CBCCCCCGGGCEECTTSCEEBCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHH
T ss_pred             EEEccCCcccEEECCCCCEEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHH
Confidence            4699999999999999999999999998765322111           1134688899999998   4556788999999


Q ss_pred             HHHHHHHHHhCCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhc
Q 045790           71 FRVVALEIATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAAN  150 (231)
Q Consensus        71 ~G~vl~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (231)
                      +|++++++++|..||............                                               ......
T Consensus       239 lG~il~el~~g~~p~~~~~~~~~~~~~-----------------------------------------------~~~~~~  271 (337)
T 3ll6_A          239 LGCILYLLCFRQHPFEDGAKLRIVNGK-----------------------------------------------YSIPPH  271 (337)
T ss_dssp             HHHHHHHHHHSSCCC-----------------------------------------------------------CCCCTT
T ss_pred             HHHHHHHHHhCCCCCcchhHHHhhcCc-----------------------------------------------ccCCcc
Confidence            999999999999999643321000000                                               000000


Q ss_pred             ccccCcccHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCCC
Q 045790          151 ERLDSRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTMP  197 (231)
Q Consensus       151 ~~l~~~~~~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~~  197 (231)
                      ..        ....+..++.+||+.||++|||+.|++++|+......
T Consensus       272 ~~--------~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~  310 (337)
T 3ll6_A          272 DT--------QYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAAR  310 (337)
T ss_dssp             CC--------SSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred             cc--------cchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence            00        0122567899999999999999999999998865443

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.87  E-value=1.3e-22  Score=168.34  Aligned_cols=165  Identities=21%  Similarity=0.120  Sum_probs=103.8

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhh-CCCCCCcccHhHHHHHHHHHhCCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIST-GRVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      +||||||+||+++.++.+||+|||++......    .....++..|+|||.+.+ ..++.++||||+|++++++++|..|
T Consensus       148 vH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~p  223 (353)
T 3coi_A          148 VHRDLKPGNLAVNEDCELKILDFGLARHADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTL  223 (353)
T ss_dssp             CCSSCCGGGEEECTTCCEEECSTTCTTC------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCS
T ss_pred             ccCCCCHHHEeECCCCcEEEeecccccCCCCC----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCC
Confidence            59999999999999999999999998765321    234577899999999876 5688999999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |......+....+..............+               .......+.....      ....+.+ ..........
T Consensus       224 f~~~~~~~~~~~i~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~------~~~~~~~-~~~~~~~~~~  281 (353)
T 3coi_A          224 FKGKDYLDQLTQILKVTGVPGTEFVQKL---------------NDKAAKSYIQSLP------QTPRKDF-TQLFPRASPQ  281 (353)
T ss_dssp             SBSSCHHHHHHHHHHHHCBCCHHHHTTC---------------SCHHHHHHHHTSC------BCSSCCT-TTTCTTSCHH
T ss_pred             CCCCCHHHHHHHHHHHhCCCCHHHHHHH---------------hhHHHHHHHHhCc------CCCCccH-HHhcCCcCHH
Confidence            9876544333332211111000000000               0000001110000      0000000 0011122356


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                      +.+++.+||+.||++|||+.++++|+++....
T Consensus       282 ~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~~  313 (353)
T 3coi_A          282 AADLLEKMLELDVDKRLTAAQALTHPFFEPFR  313 (353)
T ss_dssp             HHHHHHHHSCSCTTTSCCHHHHHTSGGGTTTC
T ss_pred             HHHHHHHHcCCCcccCCCHHHHhcCcchhhcc
Confidence            78899999999999999999999999996543

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.87  E-value=7.5e-23  Score=166.86  Aligned_cols=136  Identities=17%  Similarity=0.140  Sum_probs=94.3

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCc-eeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPK-TIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~   83 (231)
                      +||||||+||+++.++.+||+|||++.......... .....++..|+|||.+.+..++.++||||+|++++++++ |..
T Consensus       169 vH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~  248 (313)
T 3brb_A          169 LHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMT  248 (313)
T ss_dssp             CCCCCSGGGEEECTTSCEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred             ccCCCCcceEEEcCCCcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCC
Confidence            599999999999999999999999997654322111 233456778999999988889999999999999999999 888


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||.......                                       +....   ...          .....+.....
T Consensus       249 p~~~~~~~~---------------------------------------~~~~~---~~~----------~~~~~~~~~~~  276 (313)
T 3brb_A          249 PYPGVQNHE---------------------------------------MYDYL---LHG----------HRLKQPEDCLD  276 (313)
T ss_dssp             SSTTCCGGG---------------------------------------HHHHH---HTT----------CCCCCBTTCCH
T ss_pred             CCccCCHHH---------------------------------------HHHHH---HcC----------CCCCCCccccH
Confidence            886543211                                       11110   000          00011112234


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhcc
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNFE  193 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~~  193 (231)
                      .+.+++.+||+.||++|||+.+|+++|...
T Consensus       277 ~l~~li~~~l~~dp~~Rps~~~l~~~L~~l  306 (313)
T 3brb_A          277 ELYEIMYSCWRTDPLDRPTFSVLRLQLEKL  306 (313)
T ss_dssp             HHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            578899999999999999999999999864

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.87  E-value=7.2e-23  Score=164.58  Aligned_cols=140  Identities=16%  Similarity=0.055  Sum_probs=101.4

Q ss_pred             eeecCCCCCCeeeCCCCc---EEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhC
Q 045790            5 AYSRSPELPPGRGDFNFN---AKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATG   81 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~---~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g   81 (231)
                      -.||||||+||+++.++.   +||+|||++.......  ......|+..|+|||.+.+..++.++||||+|++++++++|
T Consensus       126 i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g  203 (284)
T 3kk8_A          126 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE--AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG  203 (284)
T ss_dssp             EECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSC--BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHS
T ss_pred             cCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCc--cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHC
Confidence            359999999999986554   9999999997664322  22345689999999999888899999999999999999999


Q ss_pred             CCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHH
Q 045790           82 RKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQ  161 (231)
Q Consensus        82 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  161 (231)
                      ..||...........+......                                            ...+.     ....
T Consensus       204 ~~pf~~~~~~~~~~~~~~~~~~--------------------------------------------~~~~~-----~~~~  234 (284)
T 3kk8_A          204 YPPFWDEDQHRLYAQIKAGAYD--------------------------------------------YPSPE-----WDTV  234 (284)
T ss_dssp             SCSSCCSSHHHHHHHHHHTCCC--------------------------------------------CCTTT-----TTTS
T ss_pred             CCCCCCCchhHHHHHHHhcccc--------------------------------------------CCchh-----hccc
Confidence            9999754432211111100000                                            00000     0011


Q ss_pred             HHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccC
Q 045790          162 MTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETT  195 (231)
Q Consensus       162 ~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~  195 (231)
                      ...+.+++.+||+.||++|||+.|+++|+++...
T Consensus       235 ~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~  268 (284)
T 3kk8_A          235 TPEAKSLIDSMLTVNPKKRITADQALKVPWICNR  268 (284)
T ss_dssp             CHHHHHHHHHHSCSSTTTSCCHHHHTTSHHHHSC
T ss_pred             CHHHHHHHHHHcccChhhCCCHHHHhcCccccCC
Confidence            2346789999999999999999999999998653

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.87  E-value=3.1e-23  Score=170.59  Aligned_cols=160  Identities=16%  Similarity=0.108  Sum_probs=100.5

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhC-CCCCCcccHhHHHHHHHHHhCCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTG-RVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      .||||||+||+++.++.+||+|||++....... .......|+..|+|||.+.+. .++.++||||+|++++++++|..|
T Consensus       146 vH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p  224 (331)
T 4aaa_A          146 IHRDIKPENILVSQSGVVKLCDFGFARTLAAPG-EVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPL  224 (331)
T ss_dssp             CCCCCCGGGEEECTTSCEEECCCTTC-------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             EccCcChheEEEcCCCcEEEEeCCCceeecCCc-cccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCC
Confidence            599999999999999999999999997654321 122345688999999999765 578999999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcc-hhhhhhcccccCccc-----
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGER-KLLSAANERLDSRFD-----  158 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~-----  158 (231)
                      |...........+.........                        .    ....+... .......+.+.....     
T Consensus       225 f~~~~~~~~~~~~~~~~~~~~~------------------------~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (331)
T 4aaa_A          225 FPGDSDIDQLYHIMMCLGNLIP------------------------R----HQELFNKNPVFAGVRLPEIKEREPLERRY  276 (331)
T ss_dssp             CCCSSHHHHHHHHHHHHCSCCH------------------------H----HHHHHHHCGGGTTCCCCCCSSCCCHHHHS
T ss_pred             CCCCCcHHHHHHHHHHhCCCCh------------------------h----hhhHhhhccccccccCccccccchhhhcc
Confidence            9765543322222211000000                        0    00000000 000000000000000     


Q ss_pred             HHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          159 EQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       159 ~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      ......+.+|+.+||+.||++|||+.||++|+++..
T Consensus       277 ~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~  312 (331)
T 4aaa_A          277 PKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQM  312 (331)
T ss_dssp             TTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHG
T ss_pred             cchhHHHHHHHHHHhccCcccCCCHHHHhcCchhcc
Confidence            012356788999999999999999999999999865

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.87  E-value=1.2e-22  Score=163.55  Aligned_cols=134  Identities=12%  Similarity=0.089  Sum_probs=101.4

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCc
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      -.||||||+||+++.++.+||+|||++......   ......|+..|+|||.+.+..++.++|+||+|++++++++|..|
T Consensus       135 i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p  211 (284)
T 2vgo_A          135 VIHRDIKPENLLMGYKGELKIADFGWSVHAPSL---RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPP  211 (284)
T ss_dssp             EECCCCSGGGEEECTTCCEEECCCTTCEECSSS---CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCT
T ss_pred             ceecCCCHHHEEEcCCCCEEEecccccccCccc---ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCC
Confidence            359999999999999999999999998765432   12345688999999999888889999999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |...........+                                          ..       .+..+..    .....
T Consensus       212 f~~~~~~~~~~~~------------------------------------------~~-------~~~~~~~----~~~~~  238 (284)
T 2vgo_A          212 FDSPSHTETHRRI------------------------------------------VN-------VDLKFPP----FLSDG  238 (284)
T ss_dssp             TCCSSHHHHHHHH------------------------------------------HT-------TCCCCCT----TSCHH
T ss_pred             CCCCCHhHHHHHH------------------------------------------hc-------cccCCCC----cCCHH
Confidence            9754322111111                                          00       0001111    11235


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      +.+++..||+.||++|||+.++++|+++..
T Consensus       239 ~~~li~~~l~~~p~~Rps~~~ll~h~~~~~  268 (284)
T 2vgo_A          239 SKDLISKLLRYHPPQRLPLKGVMEHPWVKA  268 (284)
T ss_dssp             HHHHHHHHSCSSGGGSCCHHHHHTCHHHHH
T ss_pred             HHHHHHHHhhcCHhhCCCHHHHhhCHHHHh
Confidence            678999999999999999999999999854

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.87  E-value=8.3e-23  Score=167.40  Aligned_cols=138  Identities=16%  Similarity=0.055  Sum_probs=101.6

Q ss_pred             eecCCCCCCeeeCCCC----cEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhC
Q 045790            6 YSRSPELPPGRGDFNF----NAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATG   81 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~----~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g   81 (231)
                      .||||||+||+++.++    .+||+|||++.......  ......|+..|+|||.+.+..++.++||||+|++++++++|
T Consensus       137 vH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g  214 (321)
T 2a2a_A          137 AHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG  214 (321)
T ss_dssp             ECCCCSGGGEEESCTTSSSCCEEECCCTTCEECCTTC--CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHS
T ss_pred             ecCCCChHHEEEecCCCCcCCEEEccCccceecCccc--cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHC
Confidence            5999999999999877    79999999998765322  12345689999999999888899999999999999999999


Q ss_pred             CCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHH
Q 045790           82 RKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQ  161 (231)
Q Consensus        82 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  161 (231)
                      ..||...........+.....                                             ..++....    ..
T Consensus       215 ~~pf~~~~~~~~~~~i~~~~~---------------------------------------------~~~~~~~~----~~  245 (321)
T 2a2a_A          215 ASPFLGDTKQETLANITSVSY---------------------------------------------DFDEEFFS----HT  245 (321)
T ss_dssp             CCSSCCSSHHHHHHHHHTTCC---------------------------------------------CCCHHHHT----TC
T ss_pred             CCCCCCCCHHHHHHHHHhccc---------------------------------------------ccChhhhc----cc
Confidence            999975443211111110000                                             00000001    11


Q ss_pred             HHHHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          162 MTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       162 ~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      ...+.+++.+||+.||++|||+.++++|+++..
T Consensus       246 ~~~~~~li~~~l~~dp~~Rps~~e~l~hp~~~~  278 (321)
T 2a2a_A          246 SELAKDFIRKLLVKETRKRLTIQEALRHPWITP  278 (321)
T ss_dssp             CHHHHHHHHTTSCSSTTTSCCHHHHHHSTTTSC
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHhcCccccC
Confidence            234678999999999999999999999999854

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.87  E-value=4.4e-23  Score=168.30  Aligned_cols=140  Identities=20%  Similarity=0.155  Sum_probs=94.3

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCC-ceeEeeccccccchhhhhh-----------CCCCCCcccHhHHH
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGP-KTIMLVGTLAYMASEYIST-----------GRVSKELDVFSFRV   73 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~-----------~~~~~~~Dv~s~G~   73 (231)
                      +||||||+||+++. +.+||+|||++......... ......|+..|+|||.+.+           ..++.++||||+|+
T Consensus       149 vH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~  227 (313)
T 3cek_A          149 VHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGC  227 (313)
T ss_dssp             CCCCCCGGGEEEET-TEEEECCCSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHH
T ss_pred             eecCCCcccEEEEC-CeEEEeeccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHH
Confidence            59999999999974 88999999999766432211 1234578999999999865           35788899999999


Q ss_pred             HHHHHHhCCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccc
Q 045790           74 VALEIATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERL  153 (231)
Q Consensus        74 vl~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  153 (231)
                      +++++++|..||......                                        . .....         ..++..
T Consensus       228 il~el~~g~~pf~~~~~~----------------------------------------~-~~~~~---------~~~~~~  257 (313)
T 3cek_A          228 ILYYMTYGKTPFQQIINQ----------------------------------------I-SKLHA---------IIDPNH  257 (313)
T ss_dssp             HHHHHHHSSCTTTTCCSH----------------------------------------H-HHHHH---------HHCTTS
T ss_pred             HHHHHHhCCCchhhHHHH----------------------------------------H-HHHHH---------HHhccc
Confidence            999999999999643210                                        0 00111         111111


Q ss_pred             cCcccHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          154 DSRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       154 ~~~~~~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                      ...++......+.+++.+||+.||++|||+.++++|+++....
T Consensus       258 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~~~~~~  300 (313)
T 3cek_A          258 EIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT  300 (313)
T ss_dssp             CCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHCC-
T ss_pred             ccCCcccchHHHHHHHHHHccCCcccCcCHHHHhcCccccCCC
Confidence            1111111124567889999999999999999999999987644

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.87  E-value=2.2e-22  Score=166.64  Aligned_cols=170  Identities=17%  Similarity=0.107  Sum_probs=104.9

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCc---------eeEeeccccccchhhhhh-CCCCCCcccHhHHHHH
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPK---------TIMLVGTLAYMASEYIST-GRVSKELDVFSFRVVA   75 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~---------~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl   75 (231)
                      .||||||+||+++.++.+||+|||++..........         .....|+..|+|||++.. ..++.++||||+|+++
T Consensus       134 vH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il  213 (353)
T 2b9h_A          134 IHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCIL  213 (353)
T ss_dssp             ECSCCCGGGEEECTTCCEEECCCTTCEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHH
T ss_pred             ecCCCCHHHeEEcCCCcEEEEecccccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHH
Confidence            599999999999999999999999998764321110         122467899999998765 5688999999999999


Q ss_pred             HHHHhCCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccC
Q 045790           76 LEIATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDS  155 (231)
Q Consensus        76 ~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  155 (231)
                      ++|++|..||...........+.............              ..........+........  .... .....
T Consensus       214 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~  276 (353)
T 2b9h_A          214 AELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDL--------------RCIESPRAREYIKSLPMYP--AAPL-EKMFP  276 (353)
T ss_dssp             HHHHHSSCSCCCSSHHHHHHHHHHHHCCCCSTTTT--------------TTCCCHHHHHHHHTSCCCC--CCCH-HHHST
T ss_pred             HHHHhCCCCCCCCCcHHHHHHHHHHhCCCchhccc--------------cccccchhhHHhhcccCCC--Ccch-hhhcc
Confidence            99999999998765433322222111000000000              0000011111111100000  0000 00001


Q ss_pred             cccHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          156 RFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       156 ~~~~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                          .....+.+++.+||+.||++|||+.++++|+++....
T Consensus       277 ----~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~  313 (353)
T 2b9h_A          277 ----RVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYH  313 (353)
T ss_dssp             ----TSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred             ----cCCHHHHHHHHHhcCcCcccCCCHHHHhcCccccccC
Confidence                1124567899999999999999999999999996543

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.87  E-value=6.5e-23  Score=167.81  Aligned_cols=137  Identities=22%  Similarity=0.199  Sum_probs=100.1

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCC-ceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGP-KTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~   83 (231)
                      .||||||+||+++.++.+||+|||++......... ......++..|+|||.+.+..++.++||||+|++++++++ |..
T Consensus       160 ~H~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~  239 (322)
T 1p4o_A          160 VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQ  239 (322)
T ss_dssp             BCSCCSGGGEEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCC
T ss_pred             ccCCCccceEEEcCCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCC
Confidence            59999999999999999999999998765432111 1123356778999999988889999999999999999999 888


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||...........+                                          .. ...         ...+.....
T Consensus       240 p~~~~~~~~~~~~~------------------------------------------~~-~~~---------~~~~~~~~~  267 (322)
T 1p4o_A          240 PYQGLSNEQVLRFV------------------------------------------ME-GGL---------LDKPDNCPD  267 (322)
T ss_dssp             TTTTSCHHHHHHHH------------------------------------------HT-TCC---------CCCCTTCCH
T ss_pred             ccccCCHHHHHHHH------------------------------------------Hc-CCc---------CCCCCCCCH
Confidence            88654322111111                                          00 000         001111234


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      .+..++.+||+.||++|||+.+++++|....
T Consensus       268 ~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~  298 (322)
T 1p4o_A          268 MLFELMRMCWQYNPKMRPSFLEIISSIKEEM  298 (322)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHGGGS
T ss_pred             HHHHHHHHHcCCCcccCcCHHHHHHHHHHhh
Confidence            5678999999999999999999999998754

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.87  E-value=4.5e-23  Score=166.26  Aligned_cols=137  Identities=19%  Similarity=0.117  Sum_probs=100.6

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCc--eeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-C
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPK--TIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-G   81 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g   81 (231)
                      -+||||||+||+++.++.+||+|||++..........  .....++..|+|||.+.+..++.++||||+|++++++++ |
T Consensus       131 i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g  210 (287)
T 1u59_A          131 FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYG  210 (287)
T ss_dssp             EECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTS
T ss_pred             EeeCCCchheEEEcCCCCEEECcccceeeeccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCC
Confidence            3699999999999999999999999998764322211  122345778999999988888999999999999999998 9


Q ss_pred             CCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHH
Q 045790           82 RKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQ  161 (231)
Q Consensus        82 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  161 (231)
                      ..||......                                       .+...+..    .         .....+...
T Consensus       211 ~~p~~~~~~~---------------------------------------~~~~~i~~----~---------~~~~~~~~~  238 (287)
T 1u59_A          211 QKPYKKMKGP---------------------------------------EVMAFIEQ----G---------KRMECPPEC  238 (287)
T ss_dssp             CCTTTTCCTH---------------------------------------HHHHHHHT----T---------CCCCCCTTC
T ss_pred             CCCcccCCHH---------------------------------------HHHHHHhc----C---------CcCCCCCCc
Confidence            9999654321                                       11111100    0         001111122


Q ss_pred             HHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcc
Q 045790          162 MTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFE  193 (231)
Q Consensus       162 ~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~  193 (231)
                      ...+..++..||+.||++||++.+++++|+..
T Consensus       239 ~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~  270 (287)
T 1u59_A          239 PPELYALMSDCWIYKWEDRPDFLTVEQRMRAC  270 (287)
T ss_dssp             CHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            34678899999999999999999999999874

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.87  E-value=4.7e-23  Score=167.35  Aligned_cols=137  Identities=20%  Similarity=0.257  Sum_probs=102.3

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCc
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      -+||||||+||+++.++.+||+|||++....... .......|+..|+|||.+.+..++.++||||+|++++++++|..|
T Consensus       140 i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p  218 (303)
T 3a7i_A          140 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ-IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP  218 (303)
T ss_dssp             EECCCCSGGGEEECTTSCEEECCCTTCEECBTTB-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCT
T ss_pred             CccCCCChheEEECCCCCEEEeecccceecCccc-cccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCC
Confidence            3599999999999999999999999997764322 122345788999999999888889999999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |.......                                       ....+   . ..     ..+.+...+    ...
T Consensus       219 ~~~~~~~~---------------------------------------~~~~~---~-~~-----~~~~~~~~~----~~~  246 (303)
T 3a7i_A          219 HSELHPMK---------------------------------------VLFLI---P-KN-----NPPTLEGNY----SKP  246 (303)
T ss_dssp             TTTSCHHH---------------------------------------HHHHH---H-HS-----CCCCCCSSC----CHH
T ss_pred             CCCcCHHH---------------------------------------HHHHh---h-cC-----CCCCCcccc----CHH
Confidence            96433210                                       00000   0 00     011111112    234


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      +..++..||+.||++|||+.+|++|+++..
T Consensus       247 l~~li~~~l~~dp~~Rps~~~ll~~~~~~~  276 (303)
T 3a7i_A          247 LKEFVEACLNKEPSFRPTAKELLKHKFILR  276 (303)
T ss_dssp             HHHHHHHHCCSSGGGSCCHHHHTTCHHHHH
T ss_pred             HHHHHHHHcCCChhhCcCHHHHhhChhhhc
Confidence            678999999999999999999999999854

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.87  E-value=1.5e-22  Score=176.65  Aligned_cols=139  Identities=16%  Similarity=0.056  Sum_probs=102.7

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+|||++.++.+||+|||+++....... .....+||+.|+|||++.+..++.++|+||+||++|+|++|..||
T Consensus       311 vHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~-~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF  389 (543)
T 3c4z_A          311 IYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT-KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF  389 (543)
T ss_dssp             ECCCCCGGGEEECTTSCEEECCCTTCEECCTTCC-CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred             cccCCChHHEEEeCCCCEEEeecceeeeccCCCc-ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCC
Confidence            5999999999999999999999999987653321 223458999999999998888999999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      ......                                      ..............       ..    ++......+
T Consensus       390 ~~~~~~--------------------------------------~~~~~~~~~i~~~~-------~~----~p~~~s~~~  420 (543)
T 3c4z_A          390 RARGEK--------------------------------------VENKELKQRVLEQA-------VT----YPDKFSPAS  420 (543)
T ss_dssp             CCTTCC--------------------------------------CCHHHHHHHHHHCC-------CC----CCTTSCHHH
T ss_pred             CCCccc--------------------------------------hhHHHHHHHHhhcc-------cC----CCcccCHHH
Confidence            753210                                      01111111111100       01    111223456


Q ss_pred             HHHHHhhcCCCCCCCCC-----HHHHHHHHhccc
Q 045790          166 LIVGLWCAHPDRCFRPS-----IRQAIQVLNFET  194 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps-----~~ell~~l~~~~  194 (231)
                      ..++.+||+.||++||+     +.+|++|++|..
T Consensus       421 ~~li~~lL~~dP~~R~~~~~~~a~ei~~Hpff~~  454 (543)
T 3c4z_A          421 KDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRD  454 (543)
T ss_dssp             HHHHHHHSCSSGGGSCCCBTTBSHHHHTSGGGTT
T ss_pred             HHHHHHhccCCHhHCCCCcccCHHHHHcCccccC
Confidence            78899999999999996     589999999965

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.87  E-value=5.4e-23  Score=165.03  Aligned_cols=136  Identities=21%  Similarity=0.161  Sum_probs=99.2

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCC
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRK   83 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~   83 (231)
                      -+||||||+||+++.++.+||+|||++...............++..|+|||.+.+..++.++||||+|++++++++ |..
T Consensus       130 i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~  209 (279)
T 1qpc_A          130 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI  209 (279)
T ss_dssp             EECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCC
T ss_pred             eeccCCCHhhEEEcCCCCEEECCCcccccccCcccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCC
Confidence            3699999999999999999999999998765322111122345678999999988888999999999999999999 899


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||...........+                                          ...          .....+.....
T Consensus       210 p~~~~~~~~~~~~~------------------------------------------~~~----------~~~~~~~~~~~  237 (279)
T 1qpc_A          210 PYPGMTNPEVIQNL------------------------------------------ERG----------YRMVRPDNCPE  237 (279)
T ss_dssp             SSTTCCHHHHHHHH------------------------------------------HTT----------CCCCCCTTCCH
T ss_pred             CCcccCHHHHHHHH------------------------------------------hcc----------cCCCCcccccH
Confidence            98654322111111                                          000          00001111224


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      .+..++.+||+.||++|||+.++++.|+.
T Consensus       238 ~l~~li~~~l~~~p~~Rps~~~l~~~l~~  266 (279)
T 1qpc_A          238 ELYQLMRLCWKERPEDRPTFDYLRSVLED  266 (279)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHHHHHhccChhhCCCHHHHHHHHHH
Confidence            57789999999999999999999998876

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.87  E-value=1.9e-22  Score=161.93  Aligned_cols=136  Identities=21%  Similarity=0.195  Sum_probs=100.6

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCc
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      -+||||||+||+++.++.+||+|||++.......  ......|+..|+|||.+.+..++.++||||+|++++++++|..|
T Consensus       143 i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~  220 (284)
T 2a19_B          143 LINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDG--KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDT  220 (284)
T ss_dssp             EECSCCSGGGEEEEETTEEEECCCTTCEESSCCS--CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSS
T ss_pred             eeeccCCHHHEEEcCCCCEEECcchhheeccccc--cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCc
Confidence            3599999999999999999999999987765322  12334688999999999888899999999999999999999988


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      +.....                                            ......         ...+...++    ..
T Consensus       221 ~~~~~~--------------------------------------------~~~~~~---------~~~~~~~~~----~~  243 (284)
T 2a19_B          221 AFETSK--------------------------------------------FFTDLR---------DGIISDIFD----KK  243 (284)
T ss_dssp             HHHHHH--------------------------------------------HHHHHH---------TTCCCTTSC----HH
T ss_pred             chhHHH--------------------------------------------HHHHhh---------cccccccCC----HH
Confidence            753221                                            000000         001111111    23


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhcccCCCCC
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNFETTMPNL  199 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~~~~  199 (231)
                      +..++.+||+.||++|||+.+++++|+.....+..
T Consensus       244 ~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~~  278 (284)
T 2a19_B          244 EKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPEK  278 (284)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC----
T ss_pred             HHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCCc
Confidence            56789999999999999999999999987655443

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.87  E-value=7.2e-23  Score=168.63  Aligned_cols=138  Identities=22%  Similarity=0.152  Sum_probs=100.7

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCc-eeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CC
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPK-TIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GR   82 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~   82 (231)
                      -+||||||+||+++.++.+||+|||++.......... .....++..|+|||++.+..++.++||||+|++++++++ |.
T Consensus       178 ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~  257 (334)
T 2pvf_A          178 CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGG  257 (334)
T ss_dssp             EECSCCSGGGEEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSC
T ss_pred             eeCCCCccceEEEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCC
Confidence            3599999999999999999999999997664322111 122345678999999988888999999999999999999 99


Q ss_pred             CccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           83 KVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        83 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      .||.......                                       +...+..    .         .....+....
T Consensus       258 ~p~~~~~~~~---------------------------------------~~~~~~~----~---------~~~~~~~~~~  285 (334)
T 2pvf_A          258 SPYPGIPVEE---------------------------------------LFKLLKE----G---------HRMDKPANCT  285 (334)
T ss_dssp             CSSTTCCHHH---------------------------------------HHHHHHH----T---------CCCCCCTTCC
T ss_pred             CCcCcCCHHH---------------------------------------HHHHHhc----C---------CCCCCCccCC
Confidence            9996543221                                       1111100    0         0001111223


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      ..+..++.+||+.||++|||+.+++++|....
T Consensus       286 ~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~  317 (334)
T 2pvf_A          286 NELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL  317 (334)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            45778999999999999999999999998753

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.87  E-value=7.4e-23  Score=165.23  Aligned_cols=142  Identities=22%  Similarity=0.232  Sum_probs=92.5

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCC-CCceeEeeccccccchhhhh---hCCCCCCcccHhHHHHHHHHHhC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHEL-GPKTIMLVGTLAYMASEYIS---TGRVSKELDVFSFRVVALEIATG   81 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~s~G~vl~el~~g   81 (231)
                      .||||||+||+++.++.+||+|||++....... ........|+..|+|||.+.   ...++.++||||+|++++++++|
T Consensus       142 ~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g  221 (289)
T 3og7_A          142 IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTG  221 (289)
T ss_dssp             CCSCCCGGGEEEETTTEEEECCCC------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHS
T ss_pred             ccccCccceEEECCCCCEEEccceeccccccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHC
Confidence            599999999999999999999999987654211 11223457899999999986   45678899999999999999999


Q ss_pred             CCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHH
Q 045790           82 RKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQ  161 (231)
Q Consensus        82 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  161 (231)
                      ..||......                                      ..+...+..    ...    .+.+ .......
T Consensus       222 ~~p~~~~~~~--------------------------------------~~~~~~~~~----~~~----~~~~-~~~~~~~  254 (289)
T 3og7_A          222 QLPYSNINNR--------------------------------------DQIIEMVGR----GSL----SPDL-SKVRSNC  254 (289)
T ss_dssp             SCTTSSCCCH--------------------------------------HHHHHHHHH----TSC----CCCT-TSSCTTS
T ss_pred             CCCccccchH--------------------------------------HHHHHHhcc----ccc----Ccch-hhccccC
Confidence            9999653311                                      011111110    000    0100 0011122


Q ss_pred             HHHHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          162 MTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       162 ~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      ...+.+++.+||+.||++|||+.++++.|+...
T Consensus       255 ~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~  287 (289)
T 3og7_A          255 PKRMKRLMAECLKKKRDERPSFPRILAEIEELA  287 (289)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             CHHHHHHHHHHccCChhhCCCHHHHHHHHHHHh
Confidence            356788999999999999999999999998643

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.87  E-value=6.1e-23  Score=164.54  Aligned_cols=142  Identities=16%  Similarity=0.004  Sum_probs=102.2

Q ss_pred             eecCCCCCCeee---CCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCC
Q 045790            6 YSRSPELPPGRG---DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGR   82 (231)
Q Consensus         6 ~~rdlk~~nil~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~   82 (231)
                      .||||||+||++   +.++.+||+|||++.......  ......|+..|+|||.+.+ .++.++||||+|++++++++|.
T Consensus       128 ~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~--~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~  204 (277)
T 3f3z_A          128 AHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK--MMRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGY  204 (277)
T ss_dssp             ECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTS--CBCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSS
T ss_pred             cCCCCCHHHEEEecCCCCCcEEEEecccceeccCcc--chhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCC
Confidence            599999999999   788899999999997764322  2334578999999999854 4889999999999999999999


Q ss_pred             CccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           83 KVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        83 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      .||...........+.....                                         ..    ......    ...
T Consensus       205 ~p~~~~~~~~~~~~~~~~~~-----------------------------------------~~----~~~~~~----~~~  235 (277)
T 3f3z_A          205 PPFSAPTDSEVMLKIREGTF-----------------------------------------TF----PEKDWL----NVS  235 (277)
T ss_dssp             CSSCCSSHHHHHHHHHHCCC-----------------------------------------CC----CHHHHT----TSC
T ss_pred             CCCCCCCHHHHHHHHHhCCC-----------------------------------------CC----Cchhhh----cCC
Confidence            99975443211111110000                                         00    000000    112


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCCCCC
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTMPNL  199 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~~~~  199 (231)
                      ..+..++.+||+.||++|||+.++++|.++.......
T Consensus       236 ~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~~~  272 (277)
T 3f3z_A          236 PQAESLIRRLLTKSPKQRITSLQALEHEWFEKQLSSS  272 (277)
T ss_dssp             HHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHHHHCCS
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHhcCHHHhcccccc
Confidence            4567899999999999999999999999997654443

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.87  E-value=9.8e-23  Score=164.80  Aligned_cols=136  Identities=22%  Similarity=0.167  Sum_probs=97.0

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCC---CCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHEL---GPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGR   82 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~   82 (231)
                      .||||||+||+++.++.+||+|||+++......   ........++..|+|||.+.+..++.++||||+|++++++++|.
T Consensus       146 ~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~  225 (298)
T 3pls_A          146 VHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRG  225 (298)
T ss_dssp             CCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTS
T ss_pred             ccCCCCcceEEEcCCCcEEeCcCCCcccccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCC
Confidence            599999999999999999999999997653321   11122345678999999998888999999999999999999965


Q ss_pred             Cccc-cchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHH
Q 045790           83 KVIN-RYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQ  161 (231)
Q Consensus        83 ~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  161 (231)
                      .|+. .....                                       .+......             ......+...
T Consensus       226 ~~~~~~~~~~---------------------------------------~~~~~~~~-------------~~~~~~~~~~  253 (298)
T 3pls_A          226 APPYRHIDPF---------------------------------------DLTHFLAQ-------------GRRLPQPEYC  253 (298)
T ss_dssp             CCTTTTSCGG---------------------------------------GHHHHHHT-------------TCCCCCCTTC
T ss_pred             CCCCccCCHH---------------------------------------HHHHHhhc-------------CCCCCCCccc
Confidence            5543 22211                                       11111100             0000011112


Q ss_pred             HHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcc
Q 045790          162 MTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFE  193 (231)
Q Consensus       162 ~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~  193 (231)
                      ...+.+++.+||+.||.+|||+.++++.|...
T Consensus       254 ~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~  285 (298)
T 3pls_A          254 PDSLYQVMQQCWEADPAVRPTFRVLVGEVEQI  285 (298)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            24578899999999999999999999999873

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.87  E-value=4.5e-23  Score=169.01  Aligned_cols=129  Identities=17%  Similarity=0.169  Sum_probs=99.0

Q ss_pred             eecCCCCCCeeeC-CCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCC-CCCcccHhHHHHHHHHHhCCC
Q 045790            6 YSRSPELPPGRGD-FNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRV-SKELDVFSFRVVALEIATGRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~-~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~s~G~vl~el~~g~~   83 (231)
                      .||||||+||+++ .++.+||+|||++......   ......|+..|+|||++.+..+ +.++||||+|++++++++|..
T Consensus       171 vH~Dlkp~NIll~~~~~~~kL~Dfg~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~  247 (320)
T 3a99_A          171 LHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI  247 (320)
T ss_dssp             ECCCCSGGGEEEETTTTEEEECCCTTCEECCSS---CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSC
T ss_pred             EeCCCCHHHEEEeCCCCCEEEeeCccccccccc---cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCC
Confidence            5999999999999 6789999999999876532   2233568999999999987665 678899999999999999999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||......  ..                                               ..      .......    ..
T Consensus       248 pf~~~~~~--~~-----------------------------------------------~~------~~~~~~~----~~  268 (320)
T 3a99_A          248 PFEHDEEI--IR-----------------------------------------------GQ------VFFRQRV----SS  268 (320)
T ss_dssp             SCCSHHHH--HH-----------------------------------------------CC------CCCSSCC----CH
T ss_pred             CCCChhhh--hc-----------------------------------------------cc------ccccccC----CH
Confidence            99643210  00                                               00      0000111    23


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                      .+.+++.+||+.||++|||+.+|++|+++....
T Consensus       269 ~~~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~  301 (320)
T 3a99_A          269 ECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVL  301 (320)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSCC
T ss_pred             HHHHHHHHHccCChhhCcCHHHHhcCHhhcCcc
Confidence            467899999999999999999999999987654

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.87  E-value=2.8e-22  Score=161.56  Aligned_cols=136  Identities=19%  Similarity=0.132  Sum_probs=94.3

Q ss_pred             eecCCCCCCeee---CCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCC
Q 045790            6 YSRSPELPPGRG---DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGR   82 (231)
Q Consensus         6 ~~rdlk~~nil~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~   82 (231)
                      .||||||+||++   +.++.+||+|||++......  .......|+..|+|||.+. ..++.++||||+|++++++++|.
T Consensus       146 vH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~  222 (285)
T 3is5_A          146 VHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSD--EHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGC  222 (285)
T ss_dssp             CCCCCSGGGEEESSSSTTCCEEECCCCCCCC------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSS
T ss_pred             EECCCCHHHEEEecCCCCCCEEEEeeecceecCCc--ccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCC
Confidence            599999999999   45678999999999765432  2234457899999999985 56888999999999999999999


Q ss_pred             CccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           83 KVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        83 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      .||...............                                          .       +...... ....
T Consensus       223 ~pf~~~~~~~~~~~~~~~------------------------------------------~-------~~~~~~~-~~~~  252 (285)
T 3is5_A          223 LPFTGTSLEEVQQKATYK------------------------------------------E-------PNYAVEC-RPLT  252 (285)
T ss_dssp             CSSCCSSHHHHHHHHHHC------------------------------------------C-------CCCCC---CCCC
T ss_pred             CCCCCCCHHHHHhhhccC------------------------------------------C-------ccccccc-CcCC
Confidence            999754422111111000                                          0       0000000 0012


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      ..+.+++.+||+.||++|||+.||++|+++..
T Consensus       253 ~~~~~li~~~L~~dP~~Rps~~e~l~hp~f~~  284 (285)
T 3is5_A          253 PQAVDLLKQMLTKDPERRPSAAQVLHHEWFKQ  284 (285)
T ss_dssp             HHHHHHHHHHTCSCTTTSCCHHHHHTSGGGGC
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHhcCHHhhc
Confidence            34678999999999999999999999999865

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.87  E-value=5.5e-23  Score=164.51  Aligned_cols=143  Identities=18%  Similarity=0.179  Sum_probs=101.1

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCC-CceeEeeccccccchhhhhhCCC-CCCcccHhHHHHHHHHHhCCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELG-PKTIMLVGTLAYMASEYISTGRV-SKELDVFSFRVVALEIATGRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~s~G~vl~el~~g~~   83 (231)
                      .||||||+||+++.++.+||+|||.+........ .......|+..|+|||.+.+..+ +.++||||+|++++++++|..
T Consensus       127 ~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~  206 (276)
T 2yex_A          127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL  206 (276)
T ss_dssp             ECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSC
T ss_pred             eccCCChHHEEEccCCCEEEeeCCCccccCCCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCC
Confidence            5999999999999999999999999876532211 11234568889999999976664 678999999999999999999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||.....                                     ....+..|..    ....   ..+      ......
T Consensus       207 p~~~~~~-------------------------------------~~~~~~~~~~----~~~~---~~~------~~~~~~  236 (276)
T 2yex_A          207 PWDQPSD-------------------------------------SCQEYSDWKE----KKTY---LNP------WKKIDS  236 (276)
T ss_dssp             CCSCSCT-------------------------------------TSHHHHHHHT----TCTT---STT------GGGSCH
T ss_pred             CCCCCch-------------------------------------HHHHHHHhhh----cccc---cCc------hhhcCH
Confidence            9965331                                     1111111110    0000   000      001123


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCCCC
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTMPN  198 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~~~  198 (231)
                      .+.+++..||+.||++|||+.++++|+++......
T Consensus       237 ~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~  271 (276)
T 2yex_A          237 APLALLHKILVENPSARITIPDIKKDRWYNKPLKK  271 (276)
T ss_dssp             HHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCCC-
T ss_pred             HHHHHHHHHCCCCchhCCCHHHHhcCccccChhhc
Confidence            46789999999999999999999999998765433

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.86  E-value=5.1e-23  Score=165.08  Aligned_cols=136  Identities=20%  Similarity=0.167  Sum_probs=80.0

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      +||||||+||+++.++.+||+|||++....... .......|+..|+|||.+.+..++.++||||+|++++++++|..||
T Consensus       134 ~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~  212 (278)
T 3cok_A          134 LHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH-EKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPF  212 (278)
T ss_dssp             ECSSCCGGGEEECTTCCEEECCCTTCEECC-----------------------------CTHHHHHHHHHHHHHHSSCSS
T ss_pred             ecCCCCHHHEEEcCCCCEEEEeecceeeccCCC-CcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence            599999999999999999999999987754321 1223456889999999998878899999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      ...........+..                                                 .+.....    .....+
T Consensus       213 ~~~~~~~~~~~~~~-------------------------------------------------~~~~~~~----~~~~~~  239 (278)
T 3cok_A          213 DTDTVKNTLNKVVL-------------------------------------------------ADYEMPS----FLSIEA  239 (278)
T ss_dssp             CCCSCC-----CCS-------------------------------------------------SCCCCCT----TSCHHH
T ss_pred             CChhHHHHHHHHhh-------------------------------------------------cccCCcc----ccCHHH
Confidence            65331110000000                                                 0000001    112346


Q ss_pred             HHHHHhhcCCCCCCCCCHHHHHHHHhcccC
Q 045790          166 LIVGLWCAHPDRCFRPSIRQAIQVLNFETT  195 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps~~ell~~l~~~~~  195 (231)
                      .+++.+||+.||++|||+.++++|+++...
T Consensus       240 ~~li~~~l~~dp~~Rps~~~~l~h~~~~~~  269 (278)
T 3cok_A          240 KDLIHQLLRRNPADRLSLSSVLDHPFMSRN  269 (278)
T ss_dssp             HHHHHHHSCSSGGGSCCHHHHTTSTTTC--
T ss_pred             HHHHHHHcccCHhhCCCHHHHhcCccccCC
Confidence            789999999999999999999999998653

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.86  E-value=6.8e-23  Score=165.21  Aligned_cols=139  Identities=19%  Similarity=0.084  Sum_probs=99.7

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCc--eeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-C
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPK--TIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-G   81 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g   81 (231)
                      -+||||||+||+++.++.+||+|||++..........  .....++..|+|||.+.+..++.++||||+|++++++++ |
T Consensus       142 i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g  221 (291)
T 1u46_A          142 FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYG  221 (291)
T ss_dssp             EECSCCCGGGEEEEETTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTS
T ss_pred             cccCCCchheEEEcCCCCEEEccccccccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCC
Confidence            3699999999999999999999999998765332211  223456778999999988888899999999999999999 9


Q ss_pred             CCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHH
Q 045790           82 RKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQ  161 (231)
Q Consensus        82 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  161 (231)
                      ..||...........+..                                          ..         .........
T Consensus       222 ~~p~~~~~~~~~~~~~~~------------------------------------------~~---------~~~~~~~~~  250 (291)
T 1u46_A          222 QEPWIGLNGSQILHKIDK------------------------------------------EG---------ERLPRPEDC  250 (291)
T ss_dssp             CCTTTTCCHHHHHHHHHT------------------------------------------SC---------CCCCCCTTC
T ss_pred             CCCcccCCHHHHHHHHHc------------------------------------------cC---------CCCCCCcCc
Confidence            999975443211111110                                          00         000011112


Q ss_pred             HHHHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          162 MTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       162 ~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      ...+.+++.+||+.||++|||+.+++++|....
T Consensus       251 ~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~  283 (291)
T 1u46_A          251 PQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQ  283 (291)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred             CHHHHHHHHHHccCCcccCcCHHHHHHHHHHhC
Confidence            345788999999999999999999999998654

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.86  E-value=8.6e-23  Score=167.33  Aligned_cols=138  Identities=19%  Similarity=0.208  Sum_probs=93.6

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhh-----hCCCCCCcccHhHHHHHHHHHh
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIS-----TGRVSKELDVFSFRVVALEIAT   80 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~Dv~s~G~vl~el~~   80 (231)
                      .||||||.||+++.++.+||+|||++....... .......|+..|+|||++.     ...++.++||||+|++++++++
T Consensus       151 vH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~  229 (326)
T 2x7f_A          151 IHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTV-GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAE  229 (326)
T ss_dssp             CCCCCSGGGEEECTTCCEEECCCTTTC--------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHH
T ss_pred             cccCCcHHHEEEcCCCCEEEeeCcCceecCcCc-cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHh
Confidence            599999999999999999999999987654221 1223457899999999986     4568899999999999999999


Q ss_pred             CCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHH
Q 045790           81 GRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQ  160 (231)
Q Consensus        81 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  160 (231)
                      |..||.........                                          .......      .+.+.   ...
T Consensus       230 g~~p~~~~~~~~~~------------------------------------------~~~~~~~------~~~~~---~~~  258 (326)
T 2x7f_A          230 GAPPLCDMHPMRAL------------------------------------------FLIPRNP------APRLK---SKK  258 (326)
T ss_dssp             SSCTTTTSCHHHHH------------------------------------------HHHHHSC------CCCCS---CSC
T ss_pred             CCCCCCCCcHHHHH------------------------------------------HHhhcCc------cccCC---ccc
Confidence            99999653321100                                          0000000      00000   001


Q ss_pred             HHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccC
Q 045790          161 QMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETT  195 (231)
Q Consensus       161 ~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~  195 (231)
                      ....+..++.+||+.||++|||+.++++|+++...
T Consensus       259 ~~~~l~~li~~~l~~dp~~Rps~~~ll~hp~~~~~  293 (326)
T 2x7f_A          259 WSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRDQ  293 (326)
T ss_dssp             SCHHHHHHHHHHCCSSGGGSCCHHHHHTSHHHHCC
T ss_pred             cCHHHHHHHHHHhccChhhCCCHHHHhhChHHhhC
Confidence            12356788999999999999999999999998653

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.86  E-value=5.6e-23  Score=170.14  Aligned_cols=143  Identities=13%  Similarity=0.034  Sum_probs=99.2

Q ss_pred             eeecCCCCCCeeeCC-C---CcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh
Q 045790            5 AYSRSPELPPGRGDF-N---FNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT   80 (231)
Q Consensus         5 ~~~rdlk~~nil~~~-~---~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~   80 (231)
                      -.||||||+|||+.. +   +.+||+|||+++...... ......+|+..|+|||++.+..++.++||||+||++++|++
T Consensus       137 ivHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~  215 (342)
T 2qr7_A          137 VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN-GLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLT  215 (342)
T ss_dssp             EECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTT-CCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCC-CceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhc
Confidence            359999999999843 2   359999999998764322 22344578999999999987778889999999999999999


Q ss_pred             CCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHH
Q 045790           81 GRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQ  160 (231)
Q Consensus        81 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  160 (231)
                      |..||......                                       ........... ...      .+.......
T Consensus       216 g~~Pf~~~~~~---------------------------------------~~~~~~~~i~~-~~~------~~~~~~~~~  249 (342)
T 2qr7_A          216 GYTPFANGPDD---------------------------------------TPEEILARIGS-GKF------SLSGGYWNS  249 (342)
T ss_dssp             SSCSSCSSTTS---------------------------------------CHHHHHHHHHH-CCC------CCCSTTTTT
T ss_pred             CCCCCCCCCcC---------------------------------------CHHHHHHHHcc-CCc------ccCcccccc
Confidence            99999642210                                       01111111110 000      000000111


Q ss_pred             HHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          161 QMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       161 ~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      ....+.+++.+||+.||++|||+.++++|+++..
T Consensus       250 ~s~~~~~li~~~L~~dP~~R~t~~~il~hp~~~~  283 (342)
T 2qr7_A          250 VSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVH  283 (342)
T ss_dssp             SCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHT
T ss_pred             CCHHHHHHHHHHCCCChhHCcCHHHHhcCCeecC
Confidence            2245678999999999999999999999999843

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.86  E-value=3.3e-23  Score=165.04  Aligned_cols=136  Identities=17%  Similarity=0.134  Sum_probs=98.3

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~p   84 (231)
                      +||||||+||+++.++.+||+|||++...............++..|+|||.+.+..++.++||||+|++++++++ |..|
T Consensus       126 ~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p  205 (267)
T 3t9t_A          126 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIP  205 (267)
T ss_dssp             CCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCT
T ss_pred             ccCCCchheEEECCCCCEEEcccccccccccccccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCC
Confidence            599999999999999999999999987653211111122345668999999988889999999999999999999 8999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |...........+                                          ...          .....+......
T Consensus       206 ~~~~~~~~~~~~i------------------------------------------~~~----------~~~~~~~~~~~~  233 (267)
T 3t9t_A          206 YENRSNSEVVEDI------------------------------------------STG----------FRLYKPRLASTH  233 (267)
T ss_dssp             TTTCCHHHHHHHH------------------------------------------HTT----------CCCCCCTTSCHH
T ss_pred             CCCCCHHHHHHHH------------------------------------------hcC----------CcCCCCccCcHH
Confidence            8654322111111                                          000          000001111245


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhcc
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNFE  193 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~~  193 (231)
                      +.+++.+||+.||++|||+.+++++|...
T Consensus       234 l~~li~~~l~~~p~~Rps~~~ll~~L~~l  262 (267)
T 3t9t_A          234 VYQIMNHCWRERPEDRPAFSRLLRQLAEI  262 (267)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            67899999999999999999999999764

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.86  E-value=1.6e-22  Score=162.31  Aligned_cols=132  Identities=21%  Similarity=0.185  Sum_probs=93.2

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~p   84 (231)
                      +||||||+||+++.++.+||+|||++......    .....++..|+|||.+.+..++.++||||+|++++++++ |..|
T Consensus       139 ~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p  214 (278)
T 1byg_A          139 VHRDLAARNVLVSEDNVAKVSDFGLTKEASST----QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP  214 (278)
T ss_dssp             CCSCCSGGGEEECTTSCEEECCCCC----------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCS
T ss_pred             cccCCCcceEEEeCCCcEEEeecccccccccc----ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCC
Confidence            59999999999999999999999998764322    123356788999999988889999999999999999998 9999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |...........+.                                                    .......+......
T Consensus       215 ~~~~~~~~~~~~~~----------------------------------------------------~~~~~~~~~~~~~~  242 (278)
T 1byg_A          215 YPRIPLKDVVPRVE----------------------------------------------------KGYKMDAPDGCPPA  242 (278)
T ss_dssp             CTTSCGGGHHHHHT----------------------------------------------------TTCCCCCCTTCCHH
T ss_pred             CCCCCHHHHHHHHh----------------------------------------------------cCCCCCCcccCCHH
Confidence            86543221111100                                                    00000111122345


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhcc
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNFE  193 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~~  193 (231)
                      +..++..||+.||++|||+.++++.|+..
T Consensus       243 l~~li~~~l~~~p~~Rps~~~l~~~L~~i  271 (278)
T 1byg_A          243 VYEVMKNCWHLDAAMRPSFLQLREQLEHI  271 (278)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHhcCChhhCCCHHHHHHHHHHH
Confidence            77899999999999999999999998763

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.86  E-value=2.5e-22  Score=171.27  Aligned_cols=140  Identities=16%  Similarity=0.179  Sum_probs=95.5

Q ss_pred             eecCCCCCCeeeCC-------------CCcEEEeccccccccCCCCCC---ceeEeeccccccchhhhhh-------CCC
Q 045790            6 YSRSPELPPGRGDF-------------NFNAKLGDFGLARLMDHELGP---KTIMLVGTLAYMASEYIST-------GRV   62 (231)
Q Consensus         6 ~~rdlk~~nil~~~-------------~~~~kl~Dfg~~~~~~~~~~~---~~~~~~g~~~y~aPE~~~~-------~~~   62 (231)
                      .||||||+|||++.             ++.+||+|||+++........   ......|+..|+|||++.+       ..+
T Consensus       137 vHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~  216 (434)
T 2rio_A          137 IHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRL  216 (434)
T ss_dssp             ECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCC
T ss_pred             cccCCChHhEEEecCcccccccccCCCceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCc
Confidence            59999999999964             358999999999876543221   1234578999999999965       457


Q ss_pred             CCCcccHhHHHHHHHHHh-CCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhh
Q 045790           63 SKELDVFSFRVVALEIAT-GRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYG  141 (231)
Q Consensus        63 ~~~~Dv~s~G~vl~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (231)
                      +.++||||+||+++++++ |..||.......                                        .......  
T Consensus       217 ~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~----------------------------------------~~i~~~~--  254 (434)
T 2rio_A          217 TRSIDIFSMGCVFYYILSKGKHPFGDKYSRE----------------------------------------SNIIRGI--  254 (434)
T ss_dssp             CTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH----------------------------------------HHHHHTC--
T ss_pred             chhhhhHhHHHHHHHHHhCCCCCCCCchhhH----------------------------------------HHHhcCC--
Confidence            899999999999999998 899996432110                                        0000000  


Q ss_pred             cchhhhhhcccccCcccHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcc
Q 045790          142 ERKLLSAANERLDSRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFE  193 (231)
Q Consensus       142 ~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~  193 (231)
                       ..     .+.............+.+++.+||+.||.+|||+.+|++|+++.
T Consensus       255 -~~-----~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~hp~f~  300 (434)
T 2rio_A          255 -FS-----LDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFW  300 (434)
T ss_dssp             -CC-----CCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGS
T ss_pred             -CC-----cccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhCCccC
Confidence             00     00111111233456678899999999999999999999999984

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.86  E-value=1.2e-22  Score=164.13  Aligned_cols=135  Identities=19%  Similarity=0.106  Sum_probs=98.4

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCc--eeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPK--TIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GR   82 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~   82 (231)
                      +||||||+||+++.++.+||+|||++..........  .....++..|+|||.+.+..++.++||||+|++++++++ |.
T Consensus       139 ~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~  218 (291)
T 1xbb_A          139 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQ  218 (291)
T ss_dssp             ECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTC
T ss_pred             EcCCCCcceEEEeCCCcEEEccCCcceeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCC
Confidence            599999999999999999999999998764332211  122345678999999988888899999999999999999 99


Q ss_pred             CccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           83 KVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        83 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      .||.......                                       +...+.    ..         .....+....
T Consensus       219 ~p~~~~~~~~---------------------------------------~~~~~~----~~---------~~~~~~~~~~  246 (291)
T 1xbb_A          219 KPYRGMKGSE---------------------------------------VTAMLE----KG---------ERMGCPAGCP  246 (291)
T ss_dssp             CSSTTCCHHH---------------------------------------HHHHHH----TT---------CCCCCCTTCC
T ss_pred             CCCCCCCHHH---------------------------------------HHHHHH----cC---------CCCCCCCCCC
Confidence            9997543221                                       111100    00         0011111223


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      ..+..++..||+.||++|||+.+|++.|..
T Consensus       247 ~~l~~li~~~l~~dp~~Rps~~~l~~~L~~  276 (291)
T 1xbb_A          247 REMYDLMNLCWTYDVENRPGFAAVELRLRN  276 (291)
T ss_dssp             HHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence            457889999999999999999999998875

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.86  E-value=2.4e-22  Score=166.72  Aligned_cols=146  Identities=10%  Similarity=-0.102  Sum_probs=101.5

Q ss_pred             eecCCCCCCeeeCCCC--cEEEeccccccccCCCCCC------ceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHH
Q 045790            6 YSRSPELPPGRGDFNF--NAKLGDFGLARLMDHELGP------KTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALE   77 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~--~~kl~Dfg~~~~~~~~~~~------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~e   77 (231)
                      .||||||+||+++.++  .+||+|||+++.+......      ......|+..|+|||++.+..++.++||||+|+++|+
T Consensus       181 vH~Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~e  260 (352)
T 2jii_A          181 VHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLK  260 (352)
T ss_dssp             BCSCCCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHH
T ss_pred             cCCCCCHHHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHH
Confidence            5999999999999988  8999999999766432111      1123478899999999988889999999999999999


Q ss_pred             HHhCCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcc
Q 045790           78 IATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRF  157 (231)
Q Consensus        78 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  157 (231)
                      |++|..||.....                                     ....+.........  ......+.....  
T Consensus       261 l~~g~~pf~~~~~-------------------------------------~~~~~~~~~~~~~~--~~~~~~~~~~~~--  299 (352)
T 2jii_A          261 WLYGFLPWTNCLP-------------------------------------NTEDIMKQKQKFVD--KPGPFVGPCGHW--  299 (352)
T ss_dssp             HHHSCCTTGGGTT-------------------------------------CHHHHHHHHHHHHH--SCCCEECTTSCE--
T ss_pred             HHhCCCCcccCCc-------------------------------------CHHHHHHHHHhccC--Chhhhhhhcccc--
Confidence            9999999975431                                     11111111111110  001111110000  


Q ss_pred             cHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcc
Q 045790          158 DEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFE  193 (231)
Q Consensus       158 ~~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~  193 (231)
                       ......+.+++.+||+.||++|||+.+|++.|...
T Consensus       300 -~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~  334 (352)
T 2jii_A          300 -IRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEAL  334 (352)
T ss_dssp             -ECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred             -CCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHH
Confidence             01124578899999999999999999999998763

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.86  E-value=1.8e-22  Score=163.40  Aligned_cols=136  Identities=25%  Similarity=0.249  Sum_probs=96.4

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCC---ceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-C
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGP---KTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-G   81 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g   81 (231)
                      .||||||+||+++.++.+||+|||++.........   ......++..|+|||.+.+..++.++||||+|++++++++ +
T Consensus       150 ~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~  229 (298)
T 3f66_A          150 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG  229 (298)
T ss_dssp             CCSCCSGGGEEECTTCCEEECSCGGGCCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred             cCCCCchheEEECCCCCEEECcccccccccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCC
Confidence            59999999999999999999999999765432211   1233456778999999988889999999999999999999 5


Q ss_pred             CCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHH
Q 045790           82 RKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQ  161 (231)
Q Consensus        82 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  161 (231)
                      .+||......                                       ........   ..          ....+...
T Consensus       230 ~~~~~~~~~~---------------------------------------~~~~~~~~---~~----------~~~~~~~~  257 (298)
T 3f66_A          230 APPYPDVNTF---------------------------------------DITVYLLQ---GR----------RLLQPEYC  257 (298)
T ss_dssp             CCSSTTSCTT---------------------------------------THHHHHHT---TC----------CCCCCTTC
T ss_pred             CCCCccCCHH---------------------------------------HHHHHHhc---CC----------CCCCCccC
Confidence            5566433211                                       11111100   00          00001111


Q ss_pred             HHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcc
Q 045790          162 MTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFE  193 (231)
Q Consensus       162 ~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~  193 (231)
                      ...+.+++.+||+.||++|||+.++++.|...
T Consensus       258 ~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~  289 (298)
T 3f66_A          258 PDPLYEVMLKCWHPKAEMRPSFSELVSRISAI  289 (298)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            23577899999999999999999999998763

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.86  E-value=1.3e-22  Score=162.37  Aligned_cols=137  Identities=20%  Similarity=0.212  Sum_probs=94.0

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCC-CCCcccHhHHHHHHHHHhCCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRV-SKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      +||||||+||+++.++.+||+|||++.......  ......++..|+|||.+.+..+ +.++|+||+|++++++++|..|
T Consensus       133 ~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p  210 (276)
T 2h6d_A          133 VHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE--FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLP  210 (276)
T ss_dssp             SCCCCCGGGEEECTTSCEEECCCCGGGCCCC---------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCS
T ss_pred             ccCCCChhhEEECCCCCEEEeecccccccCCCc--ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCC
Confidence            599999999999999999999999987764321  2234567889999999977654 5789999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |........                                          ........       ..+..    .....
T Consensus       211 ~~~~~~~~~------------------------------------------~~~~~~~~-------~~~~~----~~~~~  237 (276)
T 2h6d_A          211 FDDEHVPTL------------------------------------------FKKIRGGV-------FYIPE----YLNRS  237 (276)
T ss_dssp             SCCSSHHHH------------------------------------------HHHHHHCC-------CCCCT----TSCHH
T ss_pred             CCCCcHHHH------------------------------------------HHHhhcCc-------ccCch----hcCHH
Confidence            965432211                                          11110000       00111    11234


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhcccCCC
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNFETTMP  197 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~~  197 (231)
                      +..++.+||+.||++|||+.+|++|+++....+
T Consensus       238 l~~li~~~l~~~p~~Rps~~~~l~h~~~~~~~~  270 (276)
T 2h6d_A          238 VATLLMHMLQVDPLKRATIKDIREHEWFKQDLP  270 (276)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHSHHHHTTCC
T ss_pred             HHHHHHHHccCChhhCCCHHHHHhChhhccCch
Confidence            678999999999999999999999999976543

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.86  E-value=1.7e-22  Score=171.54  Aligned_cols=139  Identities=16%  Similarity=0.106  Sum_probs=92.1

Q ss_pred             eecCCCCCCeeeCCC---CcEEEeccccccccCCCCCCceeEeeccccccchhhhhh---CCCCCCcccHhHHHHHHHHH
Q 045790            6 YSRSPELPPGRGDFN---FNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIST---GRVSKELDVFSFRVVALEIA   79 (231)
Q Consensus         6 ~~rdlk~~nil~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~---~~~~~~~Dv~s~G~vl~el~   79 (231)
                      .||||||+|||++.+   +.+||+|||+++.....  .......|++.|+|||++.+   ..++.++||||+|+++++|+
T Consensus       261 vHrDlkp~NIll~~~~~~~~~kl~DFG~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~ll  338 (419)
T 3i6u_A          261 IHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET--SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICL  338 (419)
T ss_dssp             CCSCCCGGGEEESSSSSSCCEEECCSSTTTSCC-------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHH
T ss_pred             cccCCChHhEEEecCCCcceEEEeecccceecCCC--ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHH
Confidence            599999999999754   45999999999876432  22345678999999999853   55788999999999999999


Q ss_pred             hCCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccH
Q 045790           80 TGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDE  159 (231)
Q Consensus        80 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  159 (231)
                      +|..||......                                      ..+...+..    ....  ..+....    
T Consensus       339 tg~~pf~~~~~~--------------------------------------~~~~~~i~~----~~~~--~~~~~~~----  370 (419)
T 3i6u_A          339 SGYPPFSEHRTQ--------------------------------------VSLKDQITS----GKYN--FIPEVWA----  370 (419)
T ss_dssp             HSSCSSCCCSSS--------------------------------------CCHHHHHHT----TCCC--CCHHHHT----
T ss_pred             HCCCCCCCCcch--------------------------------------HHHHHHHhc----CCCC--CCchhhc----
Confidence            999999643211                                      011111000    0000  0000000    


Q ss_pred             HHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          160 QQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       160 ~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      .....+.+++.+||+.||++|||+.|+++|+++..
T Consensus       371 ~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~  405 (419)
T 3i6u_A          371 EVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD  405 (419)
T ss_dssp             TSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCC
T ss_pred             ccCHHHHHHHHHHccCChhHCcCHHHHhCCcccCC
Confidence            11345688999999999999999999999999853

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.86  E-value=3.9e-22  Score=161.23  Aligned_cols=137  Identities=20%  Similarity=0.219  Sum_probs=102.5

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+||+++.++.+||+|||++....... .......|+..|+|||.+.+..++.++|+||+|++++++++|..||
T Consensus       137 ~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~  215 (294)
T 2rku_A          137 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG-ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF  215 (294)
T ss_dssp             ECCCCCGGGEEECTTCCEEECCCTTCEECCSTT-CCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTT
T ss_pred             cccCCChHhEEEcCCCCEEEEeccCceecccCc-cccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence            599999999999999999999999997754322 1223456889999999998888899999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      ......+...                                          ......       ..+..    .....+
T Consensus       216 ~~~~~~~~~~------------------------------------------~~~~~~-------~~~~~----~~~~~~  242 (294)
T 2rku_A          216 ETSCLKETYL------------------------------------------RIKKNE-------YSIPK----HINPVA  242 (294)
T ss_dssp             CCSSHHHHHH------------------------------------------HHHTTC-------CCCCT----TSCHHH
T ss_pred             CCCCHHHHHH------------------------------------------HHhhcc-------CCCcc----ccCHHH
Confidence            7543221110                                          100000       01111    112346


Q ss_pred             HHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          166 LIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                      .+++.+||+.||++|||+.++++|+++....
T Consensus       243 ~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~  273 (294)
T 2rku_A          243 ASLIQKMLQTDPTARPTINELLNDEFFTSGY  273 (294)
T ss_dssp             HHHHHHHTCSSGGGSCCGGGGGGSHHHHTSC
T ss_pred             HHHHHHHcccChhhCcCHHHHhhChheecCC
Confidence            7889999999999999999999999996543

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.86  E-value=1.5e-22  Score=163.51  Aligned_cols=140  Identities=21%  Similarity=0.240  Sum_probs=99.0

Q ss_pred             eeecCCCCCCeeeCC-CCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCC--CCCCcccHhHHHHHHHHHhC
Q 045790            5 AYSRSPELPPGRGDF-NFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGR--VSKELDVFSFRVVALEIATG   81 (231)
Q Consensus         5 ~~~rdlk~~nil~~~-~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~--~~~~~Dv~s~G~vl~el~~g   81 (231)
                      -+||||||+||+++. ++.+||+|||++...... ........|+..|+|||.+.+..  ++.++||||+|++++++++|
T Consensus       143 i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g  221 (295)
T 2clq_A          143 IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGI-NPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATG  221 (295)
T ss_dssp             EECCCCSGGGEEEETTTCCEEECCTTTCEESCC------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHT
T ss_pred             EEccCCChhhEEEECCCCCEEEeecccccccCCC-CCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHC
Confidence            359999999999987 899999999999765432 11223456889999999987643  78899999999999999999


Q ss_pred             CCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHH
Q 045790           82 RKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQ  161 (231)
Q Consensus        82 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  161 (231)
                      ..||......                                       ....+.....       ...+.+    +...
T Consensus       222 ~~pf~~~~~~---------------------------------------~~~~~~~~~~-------~~~~~~----~~~~  251 (295)
T 2clq_A          222 KPPFYELGEP---------------------------------------QAAMFKVGMF-------KVHPEI----PESM  251 (295)
T ss_dssp             SCTTGGGSSH---------------------------------------HHHHHHHHHH-------CCCCCC----CTTS
T ss_pred             CCCccCCCch---------------------------------------hHHHHhhccc-------cccccc----cccC
Confidence            9999643211                                       0000000000       001111    1122


Q ss_pred             HHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccC
Q 045790          162 MTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETT  195 (231)
Q Consensus       162 ~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~  195 (231)
                      ...+..++.+||+.||++|||+.++++|.++...
T Consensus       252 ~~~~~~li~~~l~~dp~~Rps~~~ll~~~~~~~~  285 (295)
T 2clq_A          252 SAEAKAFILKCFEPDPDKRACANDLLVDEFLKVS  285 (295)
T ss_dssp             CHHHHHHHHHTTCSSTTTSCCHHHHHTSGGGCC-
T ss_pred             CHHHHHHHHHHccCChhhCCCHHHHhcChhhhhc
Confidence            3456788999999999999999999999998653

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.86  E-value=1.5e-22  Score=180.73  Aligned_cols=135  Identities=24%  Similarity=0.188  Sum_probs=97.0

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~p   84 (231)
                      .||||||+|||++.++.+||+|||+++..............++..|+|||++.+..++.++||||+|+++|++++ |..|
T Consensus       513 vHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~P  592 (656)
T 2j0j_A          513 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP  592 (656)
T ss_dssp             CCSCCSGGGEEEEETTEEEECCCCCCCSCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCT
T ss_pred             cccccchHhEEEeCCCCEEEEecCCCeecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCC
Confidence            599999999999999999999999998765433222334456778999999988889999999999999999997 9999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |......+..                                       ..+   ....          ....+......
T Consensus       593 f~~~~~~~~~---------------------------------------~~i---~~~~----------~~~~~~~~~~~  620 (656)
T 2j0j_A          593 FQGVKNNDVI---------------------------------------GRI---ENGE----------RLPMPPNCPPT  620 (656)
T ss_dssp             TTTCCHHHHH---------------------------------------HHH---HHTC----------CCCCCTTCCHH
T ss_pred             CCCCCHHHHH---------------------------------------HHH---HcCC----------CCCCCccccHH
Confidence            9754322111                                       111   0000          00111122345


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      +..++.+||+.||++|||+.+|++.|..
T Consensus       621 l~~li~~~l~~dP~~RPs~~el~~~L~~  648 (656)
T 2j0j_A          621 LYSLMTKCWAYDPSRRPRFTELKAQLST  648 (656)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence            7789999999999999999999999875

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.86  E-value=2.4e-22  Score=164.04  Aligned_cols=153  Identities=17%  Similarity=0.116  Sum_probs=95.1

Q ss_pred             eecCCCCCCeeeCCCCc---EEEeccccccccCCCCC------CceeEeeccccccchhhhhh-----CCCCCCcccHhH
Q 045790            6 YSRSPELPPGRGDFNFN---AKLGDFGLARLMDHELG------PKTIMLVGTLAYMASEYIST-----GRVSKELDVFSF   71 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~---~kl~Dfg~~~~~~~~~~------~~~~~~~g~~~y~aPE~~~~-----~~~~~~~Dv~s~   71 (231)
                      .||||||+||+++.++.   +||+|||++........      .......|+..|+|||++..     ..++.++||||+
T Consensus       133 vH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~Diwsl  212 (316)
T 2ac3_A          133 AHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSL  212 (316)
T ss_dssp             CCCCCCGGGEEESCSSSSCSEEECCTTCCC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHH
T ss_pred             eeCCCCHHHEEEccCCCcCceEEEEccCccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhH
Confidence            59999999999987765   99999999876532111      11223468999999999865     447889999999


Q ss_pred             HHHHHHHHhCCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcc
Q 045790           72 RVVALEIATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANE  151 (231)
Q Consensus        72 G~vl~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (231)
                      |+++++|++|..||......+..          .               ..   ..........+.+......       
T Consensus       213 G~il~~l~~g~~pf~~~~~~~~~----------~---------------~~---~~~~~~~~~~~~~~i~~~~-------  257 (316)
T 2ac3_A          213 GVILYILLSGYPPFVGRCGSDCG----------W---------------DR---GEACPACQNMLFESIQEGK-------  257 (316)
T ss_dssp             HHHHHHHHHSSCSCCCCCCSCSC----------C----------------------CCHHHHHHHHHHHHHCC-------
T ss_pred             HHHHHHHHHCCCCCccccccccc----------c---------------cc---cccchhHHHHHHHHHhccC-------
Confidence            99999999999999754311000          0               00   0000000111111110010       


Q ss_pred             cccCcccH----HHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          152 RLDSRFDE----QQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       152 ~l~~~~~~----~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                       .  .++.    .....+.+++.+||+.||++|||+.|+++|+++....
T Consensus       258 -~--~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~~  303 (316)
T 2ac3_A          258 -Y--EFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCA  303 (316)
T ss_dssp             -C--CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSTTCC---
T ss_pred             -c--ccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcChhhcCCC
Confidence             0  0111    1124578899999999999999999999999997644

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.86  E-value=2.3e-23  Score=168.96  Aligned_cols=150  Identities=17%  Similarity=0.077  Sum_probs=101.4

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCC--ceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGP--KTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~   83 (231)
                      .||||||+||+++.++.+||+|||++.........  ......++..|+|||.+.+..++.++||||+|++++++++|..
T Consensus       148 ~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~  227 (302)
T 4e5w_A          148 VHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCD  227 (302)
T ss_dssp             ECSCCSGGGEEEEETTEEEECCCTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTC
T ss_pred             ccCCCchheEEEcCCCCEEECcccccccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccC
Confidence            59999999999999999999999999876543221  1223456778999999988888999999999999999999999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      |+.......  .......                         ..............          .......+.....
T Consensus       228 p~~~~~~~~--~~~~~~~-------------------------~~~~~~~~~~~~~~----------~~~~~~~~~~~~~  270 (302)
T 4e5w_A          228 SDSSPMALF--LKMIGPT-------------------------HGQMTVTRLVNTLK----------EGKRLPCPPNCPD  270 (302)
T ss_dssp             GGGSHHHHH--HHHHCSC-------------------------CGGGHHHHHHHHHH----------TTCCCCCCTTCCH
T ss_pred             CCcchhhHH--hhccCCc-------------------------ccccCHHHHHHHHh----------ccCCCCCCCCCCH
Confidence            875432110  0000000                         00001111111111          1111112222335


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      .+.+++.+||+.||++|||+.++++.|..
T Consensus       271 ~l~~li~~~l~~dp~~Rps~~~ll~~L~~  299 (302)
T 4e5w_A          271 EVYQLMRKCWEFQPSNRTSFQNLIEGFEA  299 (302)
T ss_dssp             HHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCCCCCCCHHHHHHHHHH
Confidence            67889999999999999999999999874

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.86  E-value=5.9e-22  Score=171.20  Aligned_cols=139  Identities=14%  Similarity=0.056  Sum_probs=99.4

Q ss_pred             eecCCCCCCeeeC---CCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCC
Q 045790            6 YSRSPELPPGRGD---FNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGR   82 (231)
Q Consensus         6 ~~rdlk~~nil~~---~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~   82 (231)
                      .||||||.|||++   .++.+||+|||++......  .......|++.|+|||++.+ .++.++||||+||+++++++|.
T Consensus       143 vH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~  219 (486)
T 3mwu_A          143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN--TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGT  219 (486)
T ss_dssp             CCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSS
T ss_pred             EeccCchHHEEEecCCCCCCEEEEECCcCeECCCC--CccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCC
Confidence            5999999999995   4567999999999765432  22334578999999999864 5889999999999999999999


Q ss_pred             CccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           83 KVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        83 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      .||...........+.......                                            ..+..     ....
T Consensus       220 ~pf~~~~~~~~~~~i~~~~~~~--------------------------------------------~~~~~-----~~~s  250 (486)
T 3mwu_A          220 PPFYGKNEYDILKRVETGKYAF--------------------------------------------DLPQW-----RTIS  250 (486)
T ss_dssp             CSSCCSSHHHHHHHHHHTCCCS--------------------------------------------CSGGG-----GGSC
T ss_pred             CCCCCCCHHHHHHHHHhCCCCC--------------------------------------------CCccc-----CCCC
Confidence            9997654332222111100000                                            00000     0112


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                      ..+.+++.+||+.||++|||+.++++|+++....
T Consensus       251 ~~~~~li~~~L~~dp~~R~t~~~~l~hp~~~~~~  284 (486)
T 3mwu_A          251 DDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYS  284 (486)
T ss_dssp             HHHHHHHHHHTCSSTTTSCCHHHHHHCHHHHHTC
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHhcCHhhccCc
Confidence            3467899999999999999999999999997644

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.86  E-value=1.3e-22  Score=166.62  Aligned_cols=136  Identities=21%  Similarity=0.145  Sum_probs=98.1

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCC
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRK   83 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~   83 (231)
                      -.||||||+||+++.++.+||+|||+++.....  .......++..|+|||++.+..++.++||||+|+++++|++ |..
T Consensus       163 ivH~dlkp~NIl~~~~~~~kL~Dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~  240 (327)
T 1fvr_A          163 FIHRDLAARNILVGENYVAKIADFGLSRGQEVY--VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGT  240 (327)
T ss_dssp             EECSCCSGGGEEECGGGCEEECCTTCEESSCEE--CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCC
T ss_pred             ccCCCCccceEEEcCCCeEEEcccCcCcccccc--ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCC
Confidence            359999999999999999999999998753321  11223456778999999988888999999999999999998 999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||...........+.                                                    .......+.....
T Consensus       241 pf~~~~~~~~~~~~~----------------------------------------------------~~~~~~~~~~~~~  268 (327)
T 1fvr_A          241 PYCGMTCAELYEKLP----------------------------------------------------QGYRLEKPLNCDD  268 (327)
T ss_dssp             TTTTCCHHHHHHHGG----------------------------------------------------GTCCCCCCTTBCH
T ss_pred             CCCCCcHHHHHHHhh----------------------------------------------------cCCCCCCCCCCCH
Confidence            997544321111110                                                    0000011111224


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      .+.+++.+||+.||++|||+.+++++|....
T Consensus       269 ~l~~li~~~l~~dp~~Rps~~ell~~L~~~~  299 (327)
T 1fvr_A          269 EVYDLMRQCWREKPYERPSFAQILVSLNRML  299 (327)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            5678999999999999999999999998743

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.86  E-value=6.4e-23  Score=168.34  Aligned_cols=139  Identities=22%  Similarity=0.221  Sum_probs=81.9

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhh----hhCCCCCCcccHhHHHHHHHHHhC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYI----STGRVSKELDVFSFRVVALEIATG   81 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~----~~~~~~~~~Dv~s~G~vl~el~~g   81 (231)
                      +||||||+||+++.++.+||+|||+++......  ......|+..|+|||++    .+..++.++||||+|+++++|++|
T Consensus       148 vH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g  225 (327)
T 3aln_A          148 IHRDIKPSNILLDRSGNIKLCDFGISGQLVDSI--AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATG  225 (327)
T ss_dssp             CCSCCCGGGEEEETTTEEEECCCSSSCC--------------------------------CCSHHHHHHHHHHHHHHHHS
T ss_pred             eECCCCHHHEEEcCCCCEEEccCCCceeccccc--ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHC
Confidence            599999999999999999999999997654321  12334688899999998    445688999999999999999999


Q ss_pred             CCccccchhh-hhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHH
Q 045790           82 RKVINRYKAQ-KLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQ  160 (231)
Q Consensus        82 ~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  160 (231)
                      ..||...... .....+...                                                ..+.+.......
T Consensus       226 ~~pf~~~~~~~~~~~~~~~~------------------------------------------------~~~~~~~~~~~~  257 (327)
T 3aln_A          226 RFPYPKWNSVFDQLTQVVKG------------------------------------------------DPPQLSNSEERE  257 (327)
T ss_dssp             CCCSSCC-------CCCCCS------------------------------------------------CCCCCCCCSSCC
T ss_pred             CCCCCCcchHHHHHHHHhcC------------------------------------------------CCCCCCCccccc
Confidence            9999753211 000000000                                                000000000011


Q ss_pred             HHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          161 QMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       161 ~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      ....+..++.+||+.||++|||+.+|++|+++..
T Consensus       258 ~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~  291 (327)
T 3aln_A          258 FSPSFINFVNLCLTKDESKRPKYKELLKHPFILM  291 (327)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHH
T ss_pred             CCHHHHHHHHHHhhCChhhCcCHHHHHhChHHHH
Confidence            1235678999999999999999999999998854

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.86  E-value=4.4e-22  Score=169.67  Aligned_cols=139  Identities=18%  Similarity=0.143  Sum_probs=92.4

Q ss_pred             eecCCCCCCeeeC-----CCCcEEEeccccccccCCCCC--CceeEeeccccccchhhhh---hCCCCCCcccHhHHHHH
Q 045790            6 YSRSPELPPGRGD-----FNFNAKLGDFGLARLMDHELG--PKTIMLVGTLAYMASEYIS---TGRVSKELDVFSFRVVA   75 (231)
Q Consensus         6 ~~rdlk~~nil~~-----~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~s~G~vl   75 (231)
                      .||||||+|||++     ....+||+|||+++.......  .......|+..|+|||++.   ...++.++||||+||++
T Consensus       140 vHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il  219 (432)
T 3p23_A          140 VHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVF  219 (432)
T ss_dssp             CCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHH
T ss_pred             EeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHH
Confidence            5999999999994     334688999999987653221  1234467899999999986   34567789999999999


Q ss_pred             HHHHh-CCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhccccc
Q 045790           76 LEIAT-GRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLD  154 (231)
Q Consensus        76 ~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  154 (231)
                      +++++ |..||........                                           ........ .    ... 
T Consensus       220 ~ellt~g~~pf~~~~~~~~-------------------------------------------~~~~~~~~-~----~~~-  250 (432)
T 3p23_A          220 YYVISEGSHPFGKSLQRQA-------------------------------------------NILLGACS-L----DCL-  250 (432)
T ss_dssp             HHHHTTSCBTTBSTTTHHH-------------------------------------------HHHTTCCC-C----TTS-
T ss_pred             HHHHcCCCCCcchhhHHHH-------------------------------------------HHHhccCC-c----ccc-
Confidence            99999 8889854321100                                           00000000 0    000 


Q ss_pred             CcccHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          155 SRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       155 ~~~~~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                       .........+.+|+.+||+.||++|||+.+|++|+++..
T Consensus       251 -~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~hp~f~~  289 (432)
T 3p23_A          251 -HPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFWS  289 (432)
T ss_dssp             -CTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTSTTTCC
T ss_pred             -CccccccHHHHHHHHHHHhCCHhhCCCHHHHHhCccccC
Confidence             001122334678999999999999999999999999853

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.86  E-value=6.6e-23  Score=169.19  Aligned_cols=143  Identities=15%  Similarity=0.049  Sum_probs=81.6

Q ss_pred             eecCCCCCCeeeCC---CCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCC
Q 045790            6 YSRSPELPPGRGDF---NFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGR   82 (231)
Q Consensus         6 ~~rdlk~~nil~~~---~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~   82 (231)
                      .||||||+||+++.   ++.+||+|||++......   ......|+..|+|||++.+..++.++||||+|++++++++|.
T Consensus       150 vH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~  226 (336)
T 3fhr_A          150 AHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQN---ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGF  226 (336)
T ss_dssp             ECSCCSGGGEEESCSSTTCCEEECCCTTCEEC-------------------------CHHHHHHHHHHHHHHHHHHHHSS
T ss_pred             ecCCCCHHHEEEEecCCCceEEEeccccceecccc---ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCC
Confidence            59999999999975   455999999999765422   223456789999999997777889999999999999999999


Q ss_pred             CccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           83 KVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        83 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      .||............                                   .....    ...      ............
T Consensus       227 ~pf~~~~~~~~~~~~-----------------------------------~~~~~----~~~------~~~~~~~~~~~~  261 (336)
T 3fhr_A          227 PPFYSNTGQAISPGM-----------------------------------KRRIR----LGQ------YGFPNPEWSEVS  261 (336)
T ss_dssp             CCC------------------------------------------------------------------CCCTTTSTTCC
T ss_pred             CCCCCccchhhhhhH-----------------------------------HHhhh----ccc------cccCchhhccCC
Confidence            999654321100000                                   00000    000      000000001123


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                      ..+.+++.+||+.||++|||+.|+++|+++....
T Consensus       262 ~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~  295 (336)
T 3fhr_A          262 EDAKQLIRLLLKTDPTERLTITQFMNHPWINQSM  295 (336)
T ss_dssp             HHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTGG
T ss_pred             HHHHHHHHHHCCCChhHCcCHHHHhcCccccccc
Confidence            4567899999999999999999999999997654

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.86  E-value=3.5e-22  Score=162.92  Aligned_cols=139  Identities=19%  Similarity=0.174  Sum_probs=102.1

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      +||||||+||+++.++.+||+|||++....... .......|+..|+|||.+.+..++.++||||+|++++++++|..||
T Consensus       147 ~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~  225 (314)
T 3com_A          147 IHRDIKAGNILLNTEGHAKLADFGVAGQLTDTM-AKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPY  225 (314)
T ss_dssp             ECCCCSGGGEEECTTCCEEECCCTTCEECBTTB-SCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTT
T ss_pred             cCCCcCHHHEEECCCCCEEEeecccchhhhhhc-cccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCC
Confidence            699999999999999999999999997654321 1223456889999999998888899999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      ........                                          ........      .+.+  ..+......+
T Consensus       226 ~~~~~~~~------------------------------------------~~~~~~~~------~~~~--~~~~~~~~~l  255 (314)
T 3com_A          226 ADIHPMRA------------------------------------------IFMIPTNP------PPTF--RKPELWSDNF  255 (314)
T ss_dssp             TTSCHHHH------------------------------------------HHHHHHSC------CCCC--SSGGGSCHHH
T ss_pred             CCCChHHH------------------------------------------HHHHhcCC------Cccc--CCcccCCHHH
Confidence            65332100                                          00000000      0000  0011112456


Q ss_pred             HHHHHhhcCCCCCCCCCHHHHHHHHhcccC
Q 045790          166 LIVGLWCAHPDRCFRPSIRQAIQVLNFETT  195 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps~~ell~~l~~~~~  195 (231)
                      .+++.+||+.||++|||+.++++|+++...
T Consensus       256 ~~li~~~l~~dp~~Rpt~~~ll~~~~~~~~  285 (314)
T 3com_A          256 TDFVKQCLVKSPEQRATATQLLQHPFVRSA  285 (314)
T ss_dssp             HHHHHHHTCSCTTTSCCHHHHTTSHHHHTC
T ss_pred             HHHHHHHccCChhhCcCHHHHHhCHHHhcC
Confidence            789999999999999999999999998654

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.86  E-value=2.7e-22  Score=162.51  Aligned_cols=147  Identities=18%  Similarity=0.238  Sum_probs=96.3

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCC----CceeEeeccccccchhhhhh-CCCCCCcccHhHHHHHHHHHh
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELG----PKTIMLVGTLAYMASEYIST-GRVSKELDVFSFRVVALEIAT   80 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~----~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~el~~   80 (231)
                      +||||||+||+++.++.+||+|||++........    .......|+..|+|||.+.+ ..++.++||||+|++++++++
T Consensus       143 ~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~  222 (303)
T 2vwi_A          143 IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELAT  222 (303)
T ss_dssp             CCCCCSGGGEEECTTCCEEECCCHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHH
T ss_pred             CCCCCChhhEEEcCCCCEEEEeccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHh
Confidence            5999999999999999999999999876543211    11234568899999999865 468899999999999999999


Q ss_pred             CCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHH
Q 045790           81 GRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQ  160 (231)
Q Consensus        81 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  160 (231)
                      |..||...................                                       ......++.....+   
T Consensus       223 g~~pf~~~~~~~~~~~~~~~~~~~---------------------------------------~~~~~~~~~~~~~~---  260 (303)
T 2vwi_A          223 GAAPYHKYPPMKVLMLTLQNDPPS---------------------------------------LETGVQDKEMLKKY---  260 (303)
T ss_dssp             SSCTTTTSCGGGHHHHHHTSSCCC---------------------------------------TTC-----CCCCCC---
T ss_pred             CCCCCccCchhhHHHHHhccCCCc---------------------------------------cccccccchhhhhh---
Confidence            999997543221111110000000                                       00000011111111   


Q ss_pred             HHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccC
Q 045790          161 QMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETT  195 (231)
Q Consensus       161 ~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~  195 (231)
                       ...+.+++.+||+.||.+|||+.++++|+++...
T Consensus       261 -~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~  294 (303)
T 2vwi_A          261 -GKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKA  294 (303)
T ss_dssp             -CHHHHHHHHHHCCSSGGGSCCHHHHHTSTTC---
T ss_pred             -hHHHHHHHHHHccCChhhCcCHHHHhhChhhhcC
Confidence             2356789999999999999999999999998653

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.86  E-value=1.4e-22  Score=166.44  Aligned_cols=138  Identities=19%  Similarity=0.151  Sum_probs=98.0

Q ss_pred             eecCCCCCCeeeCC---CCcEEEeccccccccCCCCC-CceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-
Q 045790            6 YSRSPELPPGRGDF---NFNAKLGDFGLARLMDHELG-PKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-   80 (231)
Q Consensus         6 ~~rdlk~~nil~~~---~~~~kl~Dfg~~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-   80 (231)
                      +||||||+||+++.   +..+||+|||++........ .......++..|+|||.+.+..++.++||||+|++++++++ 
T Consensus       162 ~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~  241 (327)
T 2yfx_A          162 IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL  241 (327)
T ss_dssp             CCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTT
T ss_pred             ecCcCCHhHEEEecCCCcceEEECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcC
Confidence            59999999999984   45699999999875532211 11223456788999999988889999999999999999998 


Q ss_pred             CCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHH
Q 045790           81 GRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQ  160 (231)
Q Consensus        81 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  160 (231)
                      |..||.........                                       ..+   ....          ....+..
T Consensus       242 g~~p~~~~~~~~~~---------------------------------------~~~---~~~~----------~~~~~~~  269 (327)
T 2yfx_A          242 GYMPYPSKSNQEVL---------------------------------------EFV---TSGG----------RMDPPKN  269 (327)
T ss_dssp             SCCSSTTCCHHHHH---------------------------------------HHH---HTTC----------CCCCCTT
T ss_pred             CCCCCCCcCHHHHH---------------------------------------HHH---hcCC----------CCCCCCC
Confidence            88998654322111                                       111   0000          0001111


Q ss_pred             HHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccC
Q 045790          161 QMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETT  195 (231)
Q Consensus       161 ~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~  195 (231)
                      ....+..++.+||+.||++|||+.+|+++|++...
T Consensus       270 ~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~  304 (327)
T 2yfx_A          270 CPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ  304 (327)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhc
Confidence            22456789999999999999999999999998544

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.86  E-value=4.2e-22  Score=158.76  Aligned_cols=132  Identities=14%  Similarity=0.085  Sum_probs=95.6

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCC---CcccHhHHHHHHHHHhC
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSK---ELDVFSFRVVALEIATG   81 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~---~~Dv~s~G~vl~el~~g   81 (231)
                      -.||||||+||+++.++.++|+|||+......      ....|+..|+|||.+.+..+..   ++||||+|++++++++|
T Consensus       134 i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g  207 (271)
T 3kmu_A          134 IPRHALNSRSVMIDEDMTARISMADVKFSFQS------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTR  207 (271)
T ss_dssp             CTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHC
T ss_pred             eecCCCccceEEEcCCcceeEEeccceeeecc------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhC
Confidence            45999999999999999999998887654322      2246788999999997655444   79999999999999999


Q ss_pred             CCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHH
Q 045790           82 RKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQ  161 (231)
Q Consensus        82 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  161 (231)
                      ..||........                                          ......         .......+...
T Consensus       208 ~~p~~~~~~~~~------------------------------------------~~~~~~---------~~~~~~~~~~~  236 (271)
T 3kmu_A          208 EVPFADLSNMEI------------------------------------------GMKVAL---------EGLRPTIPPGI  236 (271)
T ss_dssp             SCTTTTSCHHHH------------------------------------------HHHHHH---------SCCCCCCCTTC
T ss_pred             CCCccccChHHH------------------------------------------HHHHHh---------cCCCCCCCCCC
Confidence            999975432211                                          001000         00111111122


Q ss_pred             HHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcc
Q 045790          162 MTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFE  193 (231)
Q Consensus       162 ~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~  193 (231)
                      ...+.+++..||+.||++|||+.++++.|...
T Consensus       237 ~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l  268 (271)
T 3kmu_A          237 SPHVSKLMKICMNEDPAKRPKFDMIVPILEKM  268 (271)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHh
Confidence            34578899999999999999999999999764

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.85  E-value=6.2e-22  Score=161.49  Aligned_cols=139  Identities=20%  Similarity=0.151  Sum_probs=91.2

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhh-----hCCCCCCcccHhHHHHHHHHH
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIS-----TGRVSKELDVFSFRVVALEIA   79 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~Dv~s~G~vl~el~   79 (231)
                      -+||||||.||+++.++.+||+|||++.......  ......|+..|+|||.+.     ...++.++||||+|+++++|+
T Consensus       146 i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~  223 (318)
T 2dyl_A          146 VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK--AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELA  223 (318)
T ss_dssp             CCCCCCCGGGEEECTTSCEEECCCTTC----------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHH
T ss_pred             EEeCCCCHHHEEECCCCCEEEEECCCchhccCCc--cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHH
Confidence            4599999999999999999999999987654321  223456889999999984     445788999999999999999


Q ss_pred             hCCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccH
Q 045790           80 TGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDE  159 (231)
Q Consensus        80 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  159 (231)
                      +|..||......                                         ...........      .+.+...  .
T Consensus       224 ~g~~pf~~~~~~-----------------------------------------~~~~~~~~~~~------~~~~~~~--~  254 (318)
T 2dyl_A          224 TGQFPYKNCKTD-----------------------------------------FEVLTKVLQEE------PPLLPGH--M  254 (318)
T ss_dssp             HSSCTTTTCCSH-----------------------------------------HHHHHHHHHSC------CCCCCSS--S
T ss_pred             hCCCCCCCCCcc-----------------------------------------HHHHHHHhccC------CCCCCcc--C
Confidence            999999642210                                         01111111100      0001000  0


Q ss_pred             HHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          160 QQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       160 ~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      .....+..++.+||+.||.+|||+.+|++|+++..
T Consensus       255 ~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~  289 (318)
T 2dyl_A          255 GFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKR  289 (318)
T ss_dssp             CCCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHH
T ss_pred             CCCHHHHHHHHHHccCChhHCcCHHHHhhCHHHHh
Confidence            11235678899999999999999999999998753

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.85  E-value=1.8e-22  Score=164.03  Aligned_cols=140  Identities=16%  Similarity=0.090  Sum_probs=101.9

Q ss_pred             eecCCCCCCeee---CCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCC
Q 045790            6 YSRSPELPPGRG---DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGR   82 (231)
Q Consensus         6 ~~rdlk~~nil~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~   82 (231)
                      .||||||+||++   +.++.+||+|||++......   ......|+..|+|||.+.+..++.++||||+|++++++++|.
T Consensus       128 ~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~  204 (304)
T 2jam_A          128 VHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG---IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGY  204 (304)
T ss_dssp             CCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB---TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSS
T ss_pred             cccCCCHHHEEEecCCCCCCEEEccCCcceecCCC---ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCC
Confidence            599999999999   77889999999998764322   122346889999999998888999999999999999999999


Q ss_pred             CccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           83 KVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        83 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      .||...........+..                                           ... . .....    .....
T Consensus       205 ~pf~~~~~~~~~~~i~~-------------------------------------------~~~-~-~~~~~----~~~~~  235 (304)
T 2jam_A          205 PPFYEETESKLFEKIKE-------------------------------------------GYY-E-FESPF----WDDIS  235 (304)
T ss_dssp             CTTTTSCHHHHHHHHHH-------------------------------------------CCC-C-CCTTT----TTTSC
T ss_pred             CCCCCCCHHHHHHHHHc-------------------------------------------CCC-C-CCccc----cccCC
Confidence            99975432211111110                                           000 0 00000    01112


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCCC
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTMP  197 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~~  197 (231)
                      ..+.+++.+||+.||++|||+.++++|+++....+
T Consensus       236 ~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~  270 (304)
T 2jam_A          236 ESAKDFICHLLEKDPNERYTCEKALSHPWIDGNTA  270 (304)
T ss_dssp             HHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHSSCS
T ss_pred             HHHHHHHHHHcCCChhHCcCHHHHhcCccccCCCc
Confidence            45678999999999999999999999999976543

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.85  E-value=1.6e-21  Score=159.00  Aligned_cols=138  Identities=18%  Similarity=0.043  Sum_probs=90.4

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      +||||||+||+++.++.+||+|||++...............|+..|+|||.+.+..++.++||||+|++++++++|..||
T Consensus       156 ~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf  235 (309)
T 2h34_A          156 THRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPY  235 (309)
T ss_dssp             CCSCCCGGGEEECTTSCEEECSCCC----------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSS
T ss_pred             CcCCCChHHEEEcCCCCEEEecCccCccccccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCC
Confidence            59999999999999999999999998766443222234457889999999998888899999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcc-hhhhhhcccccCcccHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGER-KLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      ........                                           ....... .......+        .....
T Consensus       236 ~~~~~~~~-------------------------------------------~~~~~~~~~~~~~~~~--------~~~~~  264 (309)
T 2h34_A          236 QGDQLSVM-------------------------------------------GAHINQAIPRPSTVRP--------GIPVA  264 (309)
T ss_dssp             CSCHHHHH-------------------------------------------HHHHHSCCCCGGGTST--------TCCTH
T ss_pred             CCchHHHH-------------------------------------------HHHhccCCCCccccCC--------CCCHH
Confidence            75442110                                           0000000 00000111        11234


Q ss_pred             HHHHHHhhcCCCCCCCC-CHHHHHHHHhccc
Q 045790          165 LLIVGLWCAHPDRCFRP-SIRQAIQVLNFET  194 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rp-s~~ell~~l~~~~  194 (231)
                      +..++.+||+.||++|| |+.++++.|....
T Consensus       265 l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l  295 (309)
T 2h34_A          265 FDAVIARGMAKNPEDRYVTCGDLSAAAHAAL  295 (309)
T ss_dssp             HHHHHHHHTCSSGGGSCSSHHHHHHHHHHTC
T ss_pred             HHHHHHHhccCCHHHHHHhHHHHHHHHHHHH
Confidence            67899999999999999 9999999998644

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.85  E-value=7e-22  Score=171.07  Aligned_cols=137  Identities=17%  Similarity=0.105  Sum_probs=99.4

Q ss_pred             eecCCCCCCeeeCC---CCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCC
Q 045790            6 YSRSPELPPGRGDF---NFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGR   82 (231)
Q Consensus         6 ~~rdlk~~nil~~~---~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~   82 (231)
                      .||||||+|||++.   ++.+||+|||++......  .......|++.|+|||++. ..++.++||||+||++|++++|.
T Consensus       158 vH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~--~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~  234 (494)
T 3lij_A          158 VHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQ--KKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGY  234 (494)
T ss_dssp             ECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTT--BCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSS
T ss_pred             eeccCChhhEEEeCCCCCCcEEEEECCCCeECCCC--ccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCC
Confidence            59999999999976   445999999999776432  2233457899999999985 56899999999999999999999


Q ss_pred             CccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           83 KVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        83 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      .||.......+...+.......                                            ..+.. .    ...
T Consensus       235 ~pf~~~~~~~~~~~i~~~~~~~--------------------------------------------~~~~~-~----~~s  265 (494)
T 3lij_A          235 PPFGGQTDQEILRKVEKGKYTF--------------------------------------------DSPEW-K----NVS  265 (494)
T ss_dssp             CSSCCSSHHHHHHHHHHTCCCC--------------------------------------------CSGGG-T----TSC
T ss_pred             CCCCCCCHHHHHHHHHhCCCCC--------------------------------------------Cchhc-c----cCC
Confidence            9997654332222211100000                                            00000 0    112


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      ..+.+++.+||+.||.+|||+.++++|+++..
T Consensus       266 ~~~~~li~~~L~~dp~~R~s~~e~l~hp~~~~  297 (494)
T 3lij_A          266 EGAKDLIKQMLQFDSQRRISAQQALEHPWIKE  297 (494)
T ss_dssp             HHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHH
T ss_pred             HHHHHHHHHHCCCChhhCccHHHHhcCccccc
Confidence            34678999999999999999999999999854

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.85  E-value=3.6e-22  Score=162.78  Aligned_cols=129  Identities=20%  Similarity=0.170  Sum_probs=97.7

Q ss_pred             eecCCCCCCeeeC-CCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCC-CCCcccHhHHHHHHHHHhCCC
Q 045790            6 YSRSPELPPGRGD-FNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRV-SKELDVFSFRVVALEIATGRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~-~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~s~G~vl~el~~g~~   83 (231)
                      .|||||++||+++ .++.+||+|||++.......   .....|+..|+|||++.+..+ +.++||||+|++++++++|+.
T Consensus       161 ~H~dlkp~Nil~~~~~~~~kl~dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~  237 (312)
T 2iwi_A          161 VHRDIKDENILIDLRRGCAKLIDFGSGALLHDEP---YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDI  237 (312)
T ss_dssp             ECCCCSGGGEEEETTTTEEEECCCSSCEECCSSC---BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSC
T ss_pred             eecCCChhhEEEeCCCCeEEEEEcchhhhcccCc---ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCC
Confidence            5999999999999 78999999999998765322   234568899999999977665 458999999999999999999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||......  ..                                               .      ...+    +.....
T Consensus       238 pf~~~~~~--~~-----------------------------------------------~------~~~~----~~~~~~  258 (312)
T 2iwi_A          238 PFERDQEI--LE-----------------------------------------------A------ELHF----PAHVSP  258 (312)
T ss_dssp             SCCSHHHH--HH-----------------------------------------------T------CCCC----CTTSCH
T ss_pred             CCCChHHH--hh-----------------------------------------------h------ccCC----cccCCH
Confidence            99643210  00                                               0      0000    011123


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                      .+.+++.+||+.||++|||+.|+++|+++....
T Consensus       259 ~~~~li~~~l~~~p~~Rps~~e~l~~~~~~~~~  291 (312)
T 2iwi_A          259 DCCALIRRCLAPKPSSRPSLEEILLDPWMQTPA  291 (312)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHHHSTTTCC--
T ss_pred             HHHHHHHHHccCChhhCcCHHHHhcChhhcCch
Confidence            467899999999999999999999999987644

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.85  E-value=1.6e-22  Score=174.59  Aligned_cols=138  Identities=17%  Similarity=0.071  Sum_probs=100.6

Q ss_pred             eecCCCCCCeee---CCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCC
Q 045790            6 YSRSPELPPGRG---DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGR   82 (231)
Q Consensus         6 ~~rdlk~~nil~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~   82 (231)
                      .||||||+|||+   +.++.+||+|||++.......  ......|++.|+|||++.+ .++.++||||+||++|+|++|.
T Consensus       148 vH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~  224 (484)
T 3nyv_A          148 VHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK--KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGC  224 (484)
T ss_dssp             CCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCC--SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSS
T ss_pred             eeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccccc--ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCC
Confidence            599999999999   467889999999998764322  2234568999999999865 6899999999999999999999


Q ss_pred             CccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           83 KVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        83 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      .||...........+.......                                            ..+..     ....
T Consensus       225 ~pf~~~~~~~~~~~i~~~~~~~--------------------------------------------~~~~~-----~~~s  255 (484)
T 3nyv_A          225 PPFNGANEYDILKKVEKGKYTF--------------------------------------------ELPQW-----KKVS  255 (484)
T ss_dssp             CSSCCSSHHHHHHHHHHCCCCC--------------------------------------------CSGGG-----GGSC
T ss_pred             CCCCCCCHHHHHHHHHcCCCCC--------------------------------------------CCccc-----ccCC
Confidence            9997654332221111100000                                            00000     0112


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccC
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETT  195 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~  195 (231)
                      ..+.+++.+||+.||++|||+.|+++|+++...
T Consensus       256 ~~~~~li~~~L~~dp~~R~s~~e~l~h~~~~~~  288 (484)
T 3nyv_A          256 ESAKDLIRKMLTYVPSMRISARDALDHEWIQTY  288 (484)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHHH
T ss_pred             HHHHHHHHHHCCCChhHCcCHHHHhhChhhccc
Confidence            346789999999999999999999999998653

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.85  E-value=3.8e-22  Score=162.69  Aligned_cols=167  Identities=15%  Similarity=0.122  Sum_probs=102.8

Q ss_pred             eecCCCCCCeeeC-CCCcEEEeccccccccCCCCCC--ceeEeeccccccchhhhhh-CCCCCCcccHhHHHHHHHHHhC
Q 045790            6 YSRSPELPPGRGD-FNFNAKLGDFGLARLMDHELGP--KTIMLVGTLAYMASEYIST-GRVSKELDVFSFRVVALEIATG   81 (231)
Q Consensus         6 ~~rdlk~~nil~~-~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~el~~g   81 (231)
                      .||||||+||+++ .++.+||+|||+++........  ......++..|+|||.+.. ..++.++||||+|++++++++|
T Consensus       142 ~H~dlkp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g  221 (320)
T 2i6l_A          142 LHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTG  221 (320)
T ss_dssp             BCCCCSGGGEEEETTTTEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHS
T ss_pred             ecCCCCHHHEEEcCCCCeEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhC
Confidence            5999999999997 5678999999999865432111  1223456888999999865 5688999999999999999999


Q ss_pred             CCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHH
Q 045790           82 RKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQ  161 (231)
Q Consensus        82 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  161 (231)
                      +.||...........+....+..........        .        ..+..+.........      ..+ .......
T Consensus       222 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~--------~~~~~~~~~~~~~~~------~~~-~~~~~~~  278 (320)
T 2i6l_A          222 KTLFAGAHELEQMQLILESIPVVHEEDRQEL--------L--------SVIPVYIRNDMTEPH------KPL-TQLLPGI  278 (320)
T ss_dssp             SCSSCCSSHHHHHHHHHHHSCCCCHHHHHHH--------H--------TTSCHHHHHHTTSCC------CCH-HHHSTTC
T ss_pred             CCCCCCCCHHHHHHHHHHhcCCCchhhhhhh--------h--------hcCcccccccccCCC------CCh-hHhcchh
Confidence            9999876543333333222211110000000        0        000000000000000      000 0000012


Q ss_pred             HHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccC
Q 045790          162 MTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETT  195 (231)
Q Consensus       162 ~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~  195 (231)
                      ...+.+++.+||+.||++|||+.++++|+++...
T Consensus       279 ~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~  312 (320)
T 2i6l_A          279 SREAVDFLEQILTFSPMDRLTAEEALSHPYMSIY  312 (320)
T ss_dssp             CHHHHHHHHTTSCSSGGGSCCHHHHHTSHHHHTT
T ss_pred             hHHHHHHHHHHcCCCccccCCHHHHhCCcccccc
Confidence            3457889999999999999999999999999753

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.85  E-value=3.2e-22  Score=160.70  Aligned_cols=138  Identities=17%  Similarity=0.051  Sum_probs=98.1

Q ss_pred             eecCCCCCCeeeCCCC----cEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhC
Q 045790            6 YSRSPELPPGRGDFNF----NAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATG   81 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~----~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g   81 (231)
                      .||||||+||+++.++    .+||+|||++.......  ......|+..|+|||.+.+..++.++||||+|++++++++|
T Consensus       130 ~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g  207 (283)
T 3bhy_A          130 AHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG  207 (283)
T ss_dssp             ECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHS
T ss_pred             cCCCCChHHEEEecCCCCCCceEEEecccceeccCCC--cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHC
Confidence            5999999999998766    79999999997764322  22345688999999999888899999999999999999999


Q ss_pred             CCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHH
Q 045790           82 RKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQ  161 (231)
Q Consensus        82 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  161 (231)
                      ..||...........+....                                         ..    .......    ..
T Consensus       208 ~~p~~~~~~~~~~~~~~~~~-----------------------------------------~~----~~~~~~~----~~  238 (283)
T 3bhy_A          208 ASPFLGETKQETLTNISAVN-----------------------------------------YD----FDEEYFS----NT  238 (283)
T ss_dssp             SCTTCCSSHHHHHHHHHTTC-----------------------------------------CC----CCHHHHT----TC
T ss_pred             CCCCCCcchHHHHHHhHhcc-----------------------------------------cC----Ccchhcc----cC
Confidence            99997544321111110000                                         00    0000000    11


Q ss_pred             HHHHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          162 MTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       162 ~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      ...+.+++.+||+.||++|||+.++++|+++..
T Consensus       239 ~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~  271 (283)
T 3bhy_A          239 SELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKA  271 (283)
T ss_dssp             CHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHH
T ss_pred             CHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHH
Confidence            235678999999999999999999999998854

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.85  E-value=6.2e-22  Score=161.20  Aligned_cols=141  Identities=21%  Similarity=0.198  Sum_probs=91.7

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      +||||||+||+++.++.+||+|||++....... .......|+..|+|||.+.+..++.++||||+|++++++++|..||
T Consensus       158 ~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~  236 (310)
T 2wqm_A          158 MHRDIKPANVFITATGVVKLGDLGLGRFFSSKT-TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPF  236 (310)
T ss_dssp             CCCCCCGGGEEECTTSCEEECCC-------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred             eCCCCcHHHEEEcCCCCEEEEeccceeeecCCC-ccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence            599999999999999999999999987654321 1223456889999999998888999999999999999999999998


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      .....                                        ........... ...     +...   .......+
T Consensus       237 ~~~~~----------------------------------------~~~~~~~~~~~-~~~-----~~~~---~~~~~~~l  267 (310)
T 2wqm_A          237 YGDKM----------------------------------------NLYSLCKKIEQ-CDY-----PPLP---SDHYSEEL  267 (310)
T ss_dssp             C---C----------------------------------------CHHHHHHHHHT-TCS-----CCCC---TTTSCHHH
T ss_pred             cccch----------------------------------------hHHHHHHHhhc-ccC-----CCCc---ccccCHHH
Confidence            64321                                        11111111110 000     0000   01122457


Q ss_pred             HHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          166 LIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                      ..++.+||+.||++|||+.+|+++|......
T Consensus       268 ~~li~~~l~~dp~~Rps~~~il~~l~~l~~~  298 (310)
T 2wqm_A          268 RQLVNMCINPDPEKRPDVTYVYDVAKRMHAC  298 (310)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence            7899999999999999999999999875543

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.85  E-value=4.5e-22  Score=164.46  Aligned_cols=154  Identities=14%  Similarity=0.055  Sum_probs=103.0

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhC-CCCC-CcccHhHHHHHHHHHhCC
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTG-RVSK-ELDVFSFRVVALEIATGR   82 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~-~~Dv~s~G~vl~el~~g~   82 (231)
                      -+||||||+||+++.++.+||+|||.+......   ......|+..|+|||.+.+. .++. ++||||+|++++++++|.
T Consensus       173 i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~  249 (348)
T 2pml_X          173 ICHRDVKPSNILMDKNGRVKLSDFGESEYMVDK---KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNV  249 (348)
T ss_dssp             EECCCCCGGGEEECTTSCEEECCCTTCEECBTT---EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSS
T ss_pred             EeecCCChHhEEEcCCCcEEEeccccccccccc---cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCC
Confidence            359999999999999999999999999775432   23345688999999999776 5555 899999999999999999


Q ss_pred             Cccccchh-hhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHH
Q 045790           83 KVINRYKA-QKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQ  161 (231)
Q Consensus        83 ~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  161 (231)
                      .||..... ......+.......+.... ..                                 ................
T Consensus       250 ~pf~~~~~~~~~~~~i~~~~~~~~~~~~-~~---------------------------------~~~~~~~~~~~~~~~~  295 (348)
T 2pml_X          250 VPFSLKISLVELFNNIRTKNIEYPLDRN-HF---------------------------------LYPLTNKKSTCSNNFL  295 (348)
T ss_dssp             CSSCCSSCSHHHHHHHTSCCCCCCCSSS-SS---------------------------------TTTTCC--------CC
T ss_pred             CCCCCCCcHHHHHHHHhccCcCCccchh-hh---------------------------------hccccccccccchhhc
Confidence            99976543 2222222211111100000 00                                 0000000000000111


Q ss_pred             HHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccC
Q 045790          162 MTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETT  195 (231)
Q Consensus       162 ~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~  195 (231)
                      ...+.+++.+||+.||++|||+.++++|+++...
T Consensus       296 ~~~l~~li~~~L~~dP~~Rps~~e~l~hp~f~~~  329 (348)
T 2pml_X          296 SNEDIDFLKLFLRKNPAERITSEDALKHEWLADT  329 (348)
T ss_dssp             CHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGTTC
T ss_pred             CHHHHHHHHHHccCChhhCCCHHHHhcCccccCC
Confidence            2356789999999999999999999999998653

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.85  E-value=5.1e-22  Score=160.02  Aligned_cols=131  Identities=20%  Similarity=0.177  Sum_probs=92.8

Q ss_pred             eecCCCCCCeeeCCCCc--------EEEeccccccccCCCCCCceeEeeccccccchhhhhh-CCCCCCcccHhHHHHHH
Q 045790            6 YSRSPELPPGRGDFNFN--------AKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIST-GRVSKELDVFSFRVVAL   76 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~--------~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~   76 (231)
                      .||||||+||+++.++.        +||+|||++.....     .....++..|+|||.+.+ ..++.++||||+|++++
T Consensus       135 vH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~  209 (289)
T 4fvq_A          135 IHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLP-----KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLW  209 (289)
T ss_dssp             CCCCCCGGGEEEEECCBGGGTBCCEEEECCCCSCTTTSC-----HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHH
T ss_pred             ECCCcCcceEEEecCCcccccccceeeeccCcccccccC-----ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHH
Confidence            59999999999998876        99999999865432     123457889999999976 56889999999999999


Q ss_pred             HHHhCCC-ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccC
Q 045790           77 EIATGRK-VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDS  155 (231)
Q Consensus        77 el~~g~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  155 (231)
                      ++++|.. |+......                                       ......   . ..       ..+..
T Consensus       210 el~~g~~~~~~~~~~~---------------------------------------~~~~~~---~-~~-------~~~~~  239 (289)
T 4fvq_A          210 EICSGGDKPLSALDSQ---------------------------------------RKLQFY---E-DR-------HQLPA  239 (289)
T ss_dssp             HHHTTTCCTTTTSCHH---------------------------------------HHHHHH---H-TT-------CCCCC
T ss_pred             HHHcCCCCCccccchH---------------------------------------HHHHHh---h-cc-------CCCCC
Confidence            9999654 44322211                                       000000   0 00       00000


Q ss_pred             cccHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccC
Q 045790          156 RFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETT  195 (231)
Q Consensus       156 ~~~~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~  195 (231)
                      .    ....+.+++.+||+.||++|||+.+++++|.....
T Consensus       240 ~----~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~  275 (289)
T 4fvq_A          240 P----KAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFT  275 (289)
T ss_dssp             C----SSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC-
T ss_pred             C----CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence            0    01235789999999999999999999999987554

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.85  E-value=4.3e-22  Score=159.93  Aligned_cols=130  Identities=13%  Similarity=0.089  Sum_probs=92.9

Q ss_pred             eecCCCCCCeeeCC-------------------CCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhC-CCCCC
Q 045790            6 YSRSPELPPGRGDF-------------------NFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTG-RVSKE   65 (231)
Q Consensus         6 ~~rdlk~~nil~~~-------------------~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~   65 (231)
                      .||||||+||+++.                   ...+||+|||.+.......     ...|+..|+|||.+.+. .++.+
T Consensus       137 vH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~  211 (289)
T 1x8b_A          137 VHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQ-----VEEGDSRFLANEVLQENYTHLPK  211 (289)
T ss_dssp             ECSCCSGGGEEEC--------------------CCCEEECCCTTCEETTCSC-----CCCCCGGGCCHHHHTTCCTTHHH
T ss_pred             eecCCCHHHEEEcCCCCCcccccccccccccCCceEEEEcccccccccCCcc-----ccCCCccccChhHhcCCCCCCch
Confidence            59999999999984                   4479999999987764322     23588999999999765 45678


Q ss_pred             cccHhHHHHHHHHHhCCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchh
Q 045790           66 LDVFSFRVVALEIATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKL  145 (231)
Q Consensus        66 ~Dv~s~G~vl~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (231)
                      +||||+|++++++++|..++......                                         .    ... ... 
T Consensus       212 ~Di~slG~il~~l~~~~~~~~~~~~~-----------------------------------------~----~~~-~~~-  244 (289)
T 1x8b_A          212 ADIFALALTVVCAAGAEPLPRNGDQW-----------------------------------------H----EIR-QGR-  244 (289)
T ss_dssp             HHHHHHHHHHHHHTTCCCCCSSSHHH-----------------------------------------H----HHH-TTC-
T ss_pred             hhHHHHHHHHHHHhcCCCCCcchhHH-----------------------------------------H----HHH-cCC-
Confidence            99999999999999998876432210                                         0    000 000 


Q ss_pred             hhhhcccccCcccHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccC
Q 045790          146 LSAANERLDSRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETT  195 (231)
Q Consensus       146 ~~~~~~~l~~~~~~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~  195 (231)
                          .+.+..    .....+.+++.+||+.||++|||+.++++|+++...
T Consensus       245 ----~~~~~~----~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~  286 (289)
T 1x8b_A          245 ----LPRIPQ----VLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLSA  286 (289)
T ss_dssp             ----CCCCSS----CCCHHHHHHHHHHTCSSGGGSCCHHHHHTCTTC---
T ss_pred             ----CCCCCc----ccCHHHHHHHHHHhCCCcccCCCHHHHhhChHhhhh
Confidence                011111    112456789999999999999999999999998653

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.84  E-value=3.7e-22  Score=162.95  Aligned_cols=142  Identities=15%  Similarity=0.035  Sum_probs=98.0

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCc--------eeEeeccccccchhhhhhCC---CCCCcccHhHHH
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPK--------TIMLVGTLAYMASEYISTGR---VSKELDVFSFRV   73 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~--------~~~~~g~~~y~aPE~~~~~~---~~~~~Dv~s~G~   73 (231)
                      -+||||||+||+++.++.+||+|||++..........        .....|+..|+|||.+.+..   ++.++||||+|+
T Consensus       155 ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~  234 (317)
T 2buj_A          155 YAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGC  234 (317)
T ss_dssp             EECCCCCGGGEEECTTSCEEECCCSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHH
T ss_pred             cccCCCCHHHEEEcCCCCEEEEecCcchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHH
Confidence            3599999999999999999999999886543111000        01234688999999986543   678999999999


Q ss_pred             HHHHHHhCCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccc
Q 045790           74 VALEIATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERL  153 (231)
Q Consensus        74 vl~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  153 (231)
                      +++++++|..||......                                   .  ..+.....    .         ..
T Consensus       235 il~el~~g~~p~~~~~~~-----------------------------------~--~~~~~~~~----~---------~~  264 (317)
T 2buj_A          235 VLYAMMFGEGPYDMVFQK-----------------------------------G--DSVALAVQ----N---------QL  264 (317)
T ss_dssp             HHHHHHHSSCTTHHHHHT-----------------------------------T--SCHHHHHH----C---------C-
T ss_pred             HHHHHHhCCCChhhhhcc-----------------------------------c--chhhHHhh----c---------cC
Confidence            999999999999653211                                   0  00000000    0         00


Q ss_pred             cCcccHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          154 DSRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       154 ~~~~~~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                      ...........+..++.+||+.||++|||+.+|+++|+.....
T Consensus       265 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  307 (317)
T 2buj_A          265 SIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPP  307 (317)
T ss_dssp             -CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCC
T ss_pred             CCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCC
Confidence            0000011224578899999999999999999999999876543

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.84  E-value=1e-21  Score=158.96  Aligned_cols=140  Identities=19%  Similarity=0.142  Sum_probs=101.1

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhh------hCCCCCCcccHhHHHHHHHHH
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIS------TGRVSKELDVFSFRVVALEIA   79 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~------~~~~~~~~Dv~s~G~vl~el~   79 (231)
                      .||||||.||+++.++.+||+|||++.......  ......|+..|+|||++.      ...++.++||||+|+++++++
T Consensus       146 ~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~  223 (298)
T 1phk_A          146 VHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE--KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLL  223 (298)
T ss_dssp             ECSCCSGGGEEECTTCCEEECCCTTCEECCTTC--CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHH
T ss_pred             ccCCCCcceEEEcCCCcEEEecccchhhcCCCc--ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHH
Confidence            599999999999999999999999987764322  223456889999999985      345788999999999999999


Q ss_pred             hCCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccH
Q 045790           80 TGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDE  159 (231)
Q Consensus        80 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  159 (231)
                      +|..||...........+.                                          . ...      ........
T Consensus       224 ~g~~p~~~~~~~~~~~~~~------------------------------------------~-~~~------~~~~~~~~  254 (298)
T 1phk_A          224 AGSPPFWHRKQMLMLRMIM------------------------------------------S-GNY------QFGSPEWD  254 (298)
T ss_dssp             HSSCSSCCSSHHHHHHHHH------------------------------------------H-TCC------CCCTTTGG
T ss_pred             HCCCCCcCccHHHHHHHHh------------------------------------------c-CCc------ccCccccc
Confidence            9999996543221111110                                          0 000      00000001


Q ss_pred             HHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          160 QQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       160 ~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                      .....+.+++.+||+.||++|||+.++++|+++....
T Consensus       255 ~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~  291 (298)
T 1phk_A          255 DYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYV  291 (298)
T ss_dssp             GSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTTC
T ss_pred             ccCHHHHHHHHHHccCCcccCCCHHHHHhChHhhhcc
Confidence            1224567899999999999999999999999987644

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.84  E-value=5.3e-22  Score=160.86  Aligned_cols=139  Identities=15%  Similarity=0.103  Sum_probs=96.6

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhh-----hCCCCCCcccHhHHHHHHHHHh
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIS-----TGRVSKELDVFSFRVVALEIAT   80 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~Dv~s~G~vl~el~~   80 (231)
                      +||||||+||+++.++.+||+|||++....... .......|+..|+|||.+.     ...++.++||||+|++++++++
T Consensus       139 ~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~  217 (302)
T 2j7t_A          139 IHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTL-QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQ  217 (302)
T ss_dssp             CCCCCSGGGEEECTTSCEEECCCHHHHHHHHHH-HC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHH
T ss_pred             ccCCCCHHHEEECCCCCEEEEECCCCccccccc-cccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhc
Confidence            599999999999999999999999875432110 1123356889999999984     4567889999999999999999


Q ss_pred             CCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHH
Q 045790           81 GRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQ  160 (231)
Q Consensus        81 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  160 (231)
                      |..||.........                                          ........      +..  ..+..
T Consensus       218 g~~p~~~~~~~~~~------------------------------------------~~~~~~~~------~~~--~~~~~  247 (302)
T 2j7t_A          218 IEPPHHELNPMRVL------------------------------------------LKIAKSDP------PTL--LTPSK  247 (302)
T ss_dssp             SSCTTTTSCHHHHH------------------------------------------HHHHHSCC------CCC--SSGGG
T ss_pred             CCCCCccCCHHHHH------------------------------------------HHHhccCC------ccc--CCccc
Confidence            99999754322111                                          11100000      000  00011


Q ss_pred             HHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccC
Q 045790          161 QMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETT  195 (231)
Q Consensus       161 ~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~  195 (231)
                      ....+..++.+||+.||++|||+.++++|+++...
T Consensus       248 ~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~  282 (302)
T 2j7t_A          248 WSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSI  282 (302)
T ss_dssp             SCHHHHHHHHHHSCSCTTTSCCHHHHTTSTTTTTC
T ss_pred             cCHHHHHHHHHHcccChhhCCCHHHHhcChHHhhh
Confidence            12356789999999999999999999999988653

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.84  E-value=1.3e-21  Score=169.87  Aligned_cols=139  Identities=16%  Similarity=0.052  Sum_probs=101.7

Q ss_pred             eecCCCCCCeeeCCCC---cEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCC
Q 045790            6 YSRSPELPPGRGDFNF---NAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGR   82 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~---~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~   82 (231)
                      .||||||+|||++.++   .+||+|||++......  .......|++.|+|||++. ..++.++||||+||+++++++|.
T Consensus       168 vH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~  244 (504)
T 3q5i_A          168 VHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKD--YKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGY  244 (504)
T ss_dssp             ECSCCSGGGEEESSTTCCSSEEECCCTTCEECCTT--SCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSS
T ss_pred             EeCCCcHHHEEEecCCCCccEEEEECCCCEEcCCC--CccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCC
Confidence            5999999999998765   6999999999876532  2234457899999999985 56899999999999999999999


Q ss_pred             CccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           83 KVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        83 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      .||.......+...+.......                                             +.....    ...
T Consensus       245 ~pf~~~~~~~~~~~i~~~~~~~---------------------------------------------~~~~~~----~~s  275 (504)
T 3q5i_A          245 PPFGGQNDQDIIKKVEKGKYYF---------------------------------------------DFNDWK----NIS  275 (504)
T ss_dssp             CSSCCSSHHHHHHHHHHCCCCC---------------------------------------------CHHHHT----TSC
T ss_pred             CCCCCCCHHHHHHHHHcCCCCC---------------------------------------------CccccC----CCC
Confidence            9997654332222221100000                                             000000    012


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                      ..+.+++.+||+.||.+|||+.|+++|+++....
T Consensus       276 ~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~  309 (504)
T 3q5i_A          276 DEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYA  309 (504)
T ss_dssp             HHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHTC
T ss_pred             HHHHHHHHHHcCCChhHCCCHHHHhcCHhhhhch
Confidence            3467899999999999999999999999987644

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.84  E-value=8.3e-22  Score=166.09  Aligned_cols=158  Identities=18%  Similarity=0.164  Sum_probs=102.7

Q ss_pred             eecCCCCCCeee----CCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhh--------CCCCCCcccHhHHH
Q 045790            6 YSRSPELPPGRG----DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIST--------GRVSKELDVFSFRV   73 (231)
Q Consensus         6 ~~rdlk~~nil~----~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~--------~~~~~~~Dv~s~G~   73 (231)
                      .||||||+||++    +.++.+||+|||+++......  ......|+..|+|||++..        ..++.++||||+||
T Consensus       134 vH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~  211 (396)
T 4eut_A          134 VHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE--QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGV  211 (396)
T ss_dssp             ECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCCGG--GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHH
T ss_pred             EECCcCHHHEEEeecCCCceeEEEecCCCceEccCCC--ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHH
Confidence            599999999999    778889999999998764322  2234568999999999864        45677899999999


Q ss_pred             HHHHHHhCCCccccchhh----hhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhh
Q 045790           74 VALEIATGRKVINRYKAQ----KLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAA  149 (231)
Q Consensus        74 vl~el~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (231)
                      ++|++++|+.||......    .....+....+...........             ...   ..|          ..  
T Consensus       212 il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~-------------~~~---~~~----------~~--  263 (396)
T 4eut_A          212 TFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAE-------------NGP---IDW----------SG--  263 (396)
T ss_dssp             HHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTCCEEEECST-------------TCC---EEE----------ES--
T ss_pred             HHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCcccchhheecc-------------CCC---ccc----------Cc--
Confidence            999999999999753311    1111111111100000000000             000   000          00  


Q ss_pred             cccccCcccHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcc
Q 045790          150 NERLDSRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFE  193 (231)
Q Consensus       150 ~~~l~~~~~~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~  193 (231)
                      +..............+..++.+||+.||++|||+.++++.+...
T Consensus       264 ~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~i  307 (396)
T 4eut_A          264 DMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI  307 (396)
T ss_dssp             SCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred             cCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHH
Confidence            00111233456677788999999999999999999999888764

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.84  E-value=1.1e-21  Score=158.74  Aligned_cols=138  Identities=20%  Similarity=0.243  Sum_probs=91.5

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCC-------------CCceeEeeccccccchhhhhhC-CCCCCcccHhH
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHEL-------------GPKTIMLVGTLAYMASEYISTG-RVSKELDVFSF   71 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~-------------~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~   71 (231)
                      +||||||+||+++.++.+||+|||++.......             ........|+..|+|||.+.+. .++.++||||+
T Consensus       138 ~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~sl  217 (303)
T 1zy4_A          138 IHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSL  217 (303)
T ss_dssp             CCSCCCGGGEEECTTSCEEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHH
T ss_pred             ecccCCHHhEEEcCCCCEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHH
Confidence            599999999999999999999999987654211             1112345688899999999764 58899999999


Q ss_pred             HHHHHHHHhCCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcc
Q 045790           72 RVVALEIATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANE  151 (231)
Q Consensus        72 G~vl~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (231)
                      |++++++++   ||......                                         .........       ...
T Consensus       218 G~il~~l~~---p~~~~~~~-----------------------------------------~~~~~~~~~-------~~~  246 (303)
T 1zy4_A          218 GIIFFEMIY---PFSTGMER-----------------------------------------VNILKKLRS-------VSI  246 (303)
T ss_dssp             HHHHHHHHS---CCSSHHHH-----------------------------------------HHHHHHHHS-------TTC
T ss_pred             HHHHHHHHh---ccCCchhH-----------------------------------------HHHHHhccc-------ccc
Confidence            999999998   44321110                                         001111000       001


Q ss_pred             cccCcccHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          152 RLDSRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       152 ~l~~~~~~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      .+...+.......+.+++.+||+.||++|||+.++++|+++..
T Consensus       247 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~  289 (303)
T 1zy4_A          247 EFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPV  289 (303)
T ss_dssp             CCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSSCSCC
T ss_pred             ccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCCCCcCC
Confidence            1111122223345678999999999999999999999999854

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.84  E-value=1.1e-21  Score=160.71  Aligned_cols=139  Identities=17%  Similarity=0.108  Sum_probs=96.9

Q ss_pred             eeecCCCCCCeeeCCCCc---EEEeccccccccCCCCCCceeEeeccccccchhhhh---hCCCCCCcccHhHHHHHHHH
Q 045790            5 AYSRSPELPPGRGDFNFN---AKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIS---TGRVSKELDVFSFRVVALEI   78 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~---~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~s~G~vl~el   78 (231)
                      -.||||||+||+++.++.   +||+|||++......  .......|+..|+|||++.   ...++.++||||+|++++++
T Consensus       135 ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l  212 (322)
T 2ycf_A          135 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET--SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFIC  212 (322)
T ss_dssp             EECCCCSGGGEEESSSSSSCCEEECCCTTCEECCCC--HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHH
T ss_pred             eeccCCCHHHEEEecCCCCCeEEEccCccceecccc--cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHH
Confidence            359999999999986554   999999999775421  1122346889999999974   35578899999999999999


Q ss_pred             HhCCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCccc
Q 045790           79 ATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFD  158 (231)
Q Consensus        79 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  158 (231)
                      ++|..||......                                      ..+...+..    ....  ..+....   
T Consensus       213 ~~g~~pf~~~~~~--------------------------------------~~~~~~~~~----~~~~--~~~~~~~---  245 (322)
T 2ycf_A          213 LSGYPPFSEHRTQ--------------------------------------VSLKDQITS----GKYN--FIPEVWA---  245 (322)
T ss_dssp             HHSSCSSCSTTCS--------------------------------------SCHHHHHHH----TCCC--CCHHHHT---
T ss_pred             HhCCCCCcccchH--------------------------------------HHHHHHHHh----Cccc--cCchhhh---
Confidence            9999999643311                                      011111110    0000  0000000   


Q ss_pred             HHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcc
Q 045790          159 EQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFE  193 (231)
Q Consensus       159 ~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~  193 (231)
                       .....+.+++.+||+.||++|||+.++++|+++.
T Consensus       246 -~~~~~~~~li~~~l~~dP~~Rps~~~~l~h~~~~  279 (322)
T 2ycf_A          246 -EVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ  279 (322)
T ss_dssp             -TSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGC
T ss_pred             -hcCHHHHHHHHHHcccCHhhCCCHHHHhhCcCcC
Confidence             1134568899999999999999999999998874

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.84  E-value=4.3e-22  Score=163.44  Aligned_cols=153  Identities=17%  Similarity=0.113  Sum_probs=101.6

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCc--eeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCC
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPK--TIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGR   82 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~   82 (231)
                      -+||||||+||+++.++.+||+|||++..........  .....++..|+|||.+.+..++.++||||+|++++++++|.
T Consensus       166 ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~  245 (326)
T 2w1i_A          166 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI  245 (326)
T ss_dssp             EECSCCCGGGEEEEETTEEEECCCTTCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTT
T ss_pred             EeccCCCcceEEEcCCCcEEEecCcchhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcC
Confidence            3699999999999999999999999998765432211  12234566799999998888899999999999999999999


Q ss_pred             CccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           83 KVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        83 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      .|+...... .......                         . .........+.+...         .......+....
T Consensus       246 ~~~~~~~~~-~~~~~~~-------------------------~-~~~~~~~~~~~~~~~---------~~~~~~~~~~~~  289 (326)
T 2w1i_A          246 EKSKSPPAE-FMRMIGN-------------------------D-KQGQMIVFHLIELLK---------NNGRLPRPDGCP  289 (326)
T ss_dssp             CGGGSHHHH-HHHHHCT-------------------------T-CCTHHHHHHHHHHHH---------TTCCCCCCTTCC
T ss_pred             CCCCCCHHH-HHHhhcc-------------------------c-cchhhhHHHHHHHhh---------cCCCCCCCCccc
Confidence            988643211 0000000                         0 000011111111111         111111112233


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHhcc
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLNFE  193 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~  193 (231)
                      ..+..++.+||+.||++|||+.+|++.|...
T Consensus       290 ~~l~~li~~cl~~dP~~Rps~~el~~~L~~l  320 (326)
T 2w1i_A          290 DEIYMIMTECWNNNVNQRPSFRDLALRVDQI  320 (326)
T ss_dssp             HHHHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            5678899999999999999999999998753

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.84  E-value=1.2e-21  Score=159.91  Aligned_cols=137  Identities=19%  Similarity=0.127  Sum_probs=92.5

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCC----CCceeEeeccccccchhhhhh---------CCCCCCcccHhHH
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHEL----GPKTIMLVGTLAYMASEYIST---------GRVSKELDVFSFR   72 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~----~~~~~~~~g~~~y~aPE~~~~---------~~~~~~~Dv~s~G   72 (231)
                      .||||||+||+++ ++.+||+|||++.......    ........|+..|+|||.+.+         ..++.++||||+|
T Consensus       152 ~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG  230 (319)
T 2y4i_B          152 LHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALG  230 (319)
T ss_dssp             CCCCCCSTTEEEC---CCEECCCSCCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHH
T ss_pred             cccCCChhhEEEe-CCCEEEeecCCccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHH
Confidence            5999999999998 6799999999986543211    111233468889999999864         3467889999999


Q ss_pred             HHHHHHHhCCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhccc
Q 045790           73 VVALEIATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANER  152 (231)
Q Consensus        73 ~vl~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (231)
                      ++++++++|..||...........+                                          ...      ..+.
T Consensus       231 ~il~el~~g~~p~~~~~~~~~~~~~------------------------------------------~~~------~~~~  262 (319)
T 2y4i_B          231 TIWYELHAREWPFKTQPAEAIIWQM------------------------------------------GTG------MKPN  262 (319)
T ss_dssp             HHHHHHHHSSCSSSSCCHHHHHHHH------------------------------------------HTT------CCCC
T ss_pred             HHHHHHHhCCCCCCCCCHHHHHHHh------------------------------------------ccC------CCCC
Confidence            9999999999999754432111111                                          000      0000


Q ss_pred             ccCcccHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          153 LDSRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       153 l~~~~~~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      ...   ......+..++.+||+.||++|||+.+|++.|....
T Consensus       263 ~~~---~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~  301 (319)
T 2y4i_B          263 LSQ---IGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLP  301 (319)
T ss_dssp             CCC---SSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC-
T ss_pred             CCc---CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHH
Confidence            000   001123678999999999999999999999998754

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.82  E-value=1.3e-20  Score=156.97  Aligned_cols=83  Identities=13%  Similarity=-0.004  Sum_probs=70.4

Q ss_pred             eecCCCCCCeeeCC-----------CCcEEEeccccccccCCCC-CCceeEeeccccccchhhhhhCCCCCCcccHhHHH
Q 045790            6 YSRSPELPPGRGDF-----------NFNAKLGDFGLARLMDHEL-GPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRV   73 (231)
Q Consensus         6 ~~rdlk~~nil~~~-----------~~~~kl~Dfg~~~~~~~~~-~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~   73 (231)
                      .||||||+|||++.           ++.+||+|||+++.+.... ........||..|+|||++.+..++.++||||+||
T Consensus       194 vHrDiKp~NIll~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~  273 (365)
T 3e7e_A          194 IHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAA  273 (365)
T ss_dssp             ECCCCSGGGEEECGGGTCC------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHH
T ss_pred             ecCCCCHHHEEecccccCccccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHH
Confidence            59999999999998           8999999999997654221 12234467899999999998888999999999999


Q ss_pred             HHHHHHhCCCccccc
Q 045790           74 VALEIATGRKVINRY   88 (231)
Q Consensus        74 vl~el~~g~~p~~~~   88 (231)
                      ++|+|++|+.||...
T Consensus       274 il~elltg~~pf~~~  288 (365)
T 3e7e_A          274 TVYCMLFGTYMKVKN  288 (365)
T ss_dssp             HHHHHHHSSCCCEEE
T ss_pred             HHHHHHhCCCccccC
Confidence            999999999998643

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.82  E-value=4e-21  Score=154.81  Aligned_cols=137  Identities=15%  Similarity=0.069  Sum_probs=97.0

Q ss_pred             eecCCCCCCeeeCCC---CcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCC
Q 045790            6 YSRSPELPPGRGDFN---FNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGR   82 (231)
Q Consensus         6 ~~rdlk~~nil~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~   82 (231)
                      +||||||+||+++.+   +.+||+|||++.......  ......++..|+|||.+.+ .++.++||||+|++++++++|.
T Consensus       143 ~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~  219 (287)
T 2wei_A          143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT--KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGT  219 (287)
T ss_dssp             CCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCS--SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSS
T ss_pred             eccCCChhhEEEecCCCcccEEEeccCcceeecCCC--ccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCC
Confidence            599999999999754   469999999987654322  1223457889999999864 5889999999999999999999


Q ss_pred             CccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           83 KVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        83 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      .||...........+..                                           ...... .+.. .    ...
T Consensus       220 ~p~~~~~~~~~~~~~~~-------------------------------------------~~~~~~-~~~~-~----~~~  250 (287)
T 2wei_A          220 PPFYGKNEYDILKRVET-------------------------------------------GKYAFD-LPQW-R----TIS  250 (287)
T ss_dssp             CSSCCSSHHHHHHHHHH-------------------------------------------CCCCCC-SGGG-T----TSC
T ss_pred             CCCCCCCHHHHHHHHHc-------------------------------------------CCCCCC-chhh-h----hcC
Confidence            99975443211111110                                           000000 0000 0    112


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      ..+.+++.+||+.||++|||+.++++|+++..
T Consensus       251 ~~~~~li~~~l~~dp~~Rps~~ell~hp~~~~  282 (287)
T 2wei_A          251 DDAKDLIRKMLTFHPSLRITATQCLEHPWIQK  282 (287)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHH
T ss_pred             HHHHHHHHHHcccChhhCcCHHHHhcCHHHhc
Confidence            35678999999999999999999999998754

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.79  E-value=1e-20  Score=167.81  Aligned_cols=156  Identities=17%  Similarity=0.044  Sum_probs=97.6

Q ss_pred             eecCCCCCCeeeCCCCc---EEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCC
Q 045790            6 YSRSPELPPGRGDFNFN---AKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGR   82 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~---~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~   82 (231)
                      .||||||+||+++.++.   +||+|||++.......  ......|+..|+|||.+.+..++.++||||+|++++++++|.
T Consensus       143 VHrDLKP~NILl~~~g~~~~vKL~DFG~a~~~~~~~--~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~  220 (676)
T 3qa8_A          143 IHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE--LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGF  220 (676)
T ss_dssp             CCCCCCSTTEEEECCSSSCEEEECSCCCCCBTTSCC--CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSC
T ss_pred             ccCCCCHHHeEeecCCCceeEEEccccccccccccc--ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCC
Confidence            59999999999986654   8999999998765332  223457899999999998888999999999999999999999


Q ss_pred             CccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           83 KVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        83 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      .||...........................              ..               ...................
T Consensus       221 ~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l--------------~g---------------~~~~~~~lp~p~~l~~~ls  271 (676)
T 3qa8_A          221 RPFLPNWQPVQWHGKVREKSNEHIVVYDDL--------------TG---------------AVKFSSVLPTPNHLSGILA  271 (676)
T ss_dssp             SSCCSSCHHHHSSTTCC------CCSCCCC--------------SS---------------SCCCCSSSCCSCCCCGGGH
T ss_pred             CCCCcccchhhhhhhhhcccchhhhhhhhh--------------cc---------------ccccccccCCchhhchhhh
Confidence            999754322111000000000000000000              00               0000000000111223345


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      ..+..++.+||+.||++|||+.++++|.+|
T Consensus       272 ~~L~dLI~~mL~~DP~kRPTa~elL~hp~F  301 (676)
T 3qa8_A          272 GKLERWLQCMLMWHQRQRGTDPQNPNVGCF  301 (676)
T ss_dssp             HHHHHHHHHHSCSSCC---CCTTCCCCTTH
T ss_pred             HHHHHHHHHHccCCHhhCcCHHHHhcCHHH
Confidence            677899999999999999999998877775

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.76  E-value=2e-19  Score=145.87  Aligned_cols=124  Identities=15%  Similarity=0.069  Sum_probs=82.5

Q ss_pred             eeecCCCCCCeeeCC---CCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhC
Q 045790            5 AYSRSPELPPGRGDF---NFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATG   81 (231)
Q Consensus         5 ~~~rdlk~~nil~~~---~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g   81 (231)
                      -.||||||+||+++.   ++.+||+|||++.....                       ..++.++||||+|+++++|++|
T Consensus       138 i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~-----------------------~~~~~~~DiwslG~il~el~tg  194 (299)
T 3m2w_A          138 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTG-----------------------EKYDKSCDMWSLGVIMYILLCG  194 (299)
T ss_dssp             EECCCCSGGGEEESSSSTTCCEEECCCTTCEECTT-----------------------CGGGGHHHHHHHHHHHHHHHHS
T ss_pred             cccCCCCHHHEEEecCCCCCcEEEecccccccccc-----------------------ccCCchhhHHHHHHHHHHHHHC
Confidence            359999999999997   78899999999865321                       2356789999999999999999


Q ss_pred             CCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHH
Q 045790           82 RKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQ  161 (231)
Q Consensus        82 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  161 (231)
                      ..||...................                      ...  +.                .+.. .    ..
T Consensus       195 ~~pf~~~~~~~~~~~~~~~~~~~----------------------~~~--~~----------------~~~~-~----~~  229 (299)
T 3m2w_A          195 YPPFYSNHGLAISPGMKTRIRMG----------------------QYE--FP----------------NPEW-S----EV  229 (299)
T ss_dssp             SCSCCC-------CCSCCSSCTT----------------------CCS--SC----------------HHHH-T----TS
T ss_pred             CCCCCCCcchhhhHHHHHHHhhc----------------------ccc--CC----------------chhc-c----cC
Confidence            99997544221110000000000                      000  00                0000 0    11


Q ss_pred             HHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          162 MTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       162 ~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                      ...+..++.+||+.||++|||+.|+++|+++....
T Consensus       230 ~~~~~~li~~~l~~dP~~Rps~~e~l~hp~~~~~~  264 (299)
T 3m2w_A          230 SEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST  264 (299)
T ss_dssp             CHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTGG
T ss_pred             CHHHHHHHHHHcccChhhCCCHHHHhcChhhcccc
Confidence            24567899999999999999999999999986644

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.75  E-value=5.9e-19  Score=158.29  Aligned_cols=76  Identities=17%  Similarity=0.110  Sum_probs=64.9

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCc
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      -.||||||+|||++.+ .+||+|||+++.....     ....|++.|++||++.+.. +.++||||+|+++++|++|..|
T Consensus       203 iiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~~-----~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~  275 (681)
T 2pzi_A          203 LVYNDLKPENIMLTEE-QLKLIDLGAVSRINSF-----GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPT  275 (681)
T ss_dssp             EECCCCSGGGEEECSS-CEEECCCTTCEETTCC-----SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCE
T ss_pred             CeecccChHHeEEeCC-cEEEEecccchhcccC-----CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCC
Confidence            3599999999999975 8999999999876432     3356899999999987654 7899999999999999999988


Q ss_pred             ccc
Q 045790           85 INR   87 (231)
Q Consensus        85 ~~~   87 (231)
                      |..
T Consensus       276 ~~~  278 (681)
T 2pzi_A          276 RNG  278 (681)
T ss_dssp             ETT
T ss_pred             Ccc
Confidence            864

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.74  E-value=1.1e-18  Score=143.62  Aligned_cols=75  Identities=11%  Similarity=0.003  Sum_probs=63.0

Q ss_pred             eecCCCCCCeeeCCCC--------------------cEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCC
Q 045790            6 YSRSPELPPGRGDFNF--------------------NAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKE   65 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~   65 (231)
                      .||||||+|||++.++                    .+||+|||+++....      ...+||..|+|||++.+.. +.+
T Consensus       184 vHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~------~~~~gt~~y~aPE~~~g~~-~~~  256 (336)
T 2vuw_A          184 EHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD------GIVVFCDVSMDEDLFTGDG-DYQ  256 (336)
T ss_dssp             BCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET------TEEECCCCTTCSGGGCCCS-SHH
T ss_pred             eECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC------CcEEEeecccChhhhcCCC-ccc
Confidence            4999999999999876                    899999999987653      2357899999999997655 889


Q ss_pred             cccHhHHHH-HHHHHhCCCcccc
Q 045790           66 LDVFSFRVV-ALEIATGRKVINR   87 (231)
Q Consensus        66 ~Dv~s~G~v-l~el~~g~~p~~~   87 (231)
                      +||||++++ .+++++|..||..
T Consensus       257 ~Diwsl~~~~~~~~~~g~~p~~~  279 (336)
T 2vuw_A          257 FDIYRLMKKENNNRWGEYHPYSN  279 (336)
T ss_dssp             HHHHHHHHHHHTTCTTSCCTHHH
T ss_pred             eehhhhhCCCCcccccccCCCcc
Confidence            999998777 6667889999854

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.59  E-value=2.6e-16  Score=126.93  Aligned_cols=116  Identities=9%  Similarity=-0.037  Sum_probs=77.1

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+|||++.++.+||++++                     |++       .++.++||||+|+++|+|++|+.||
T Consensus       151 vH~Dikp~NIll~~~g~~kl~~~~---------------------~~~-------~~~~~~Di~slG~il~elltg~~Pf  202 (286)
T 3uqc_A          151 ALSIDHPSRVRVSIDGDVVLAYPA---------------------TMP-------DANPQDDIRGIGASLYALLVNRWPL  202 (286)
T ss_dssp             CCCCCSGGGEEEETTSCEEECSCC---------------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECS
T ss_pred             ccCCCCcccEEEcCCCCEEEEecc---------------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCC
Confidence            499999999999999999997443                     222       2577899999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      .................                        ...              ....    .+..    .....+
T Consensus       203 ~~~~~~~~~~~~~~~~~------------------------~~~--------------~~~~----~~~~----~~~~~l  236 (286)
T 3uqc_A          203 PEAGVRSGLAPAERDTA------------------------GQP--------------IEPA----DIDR----DIPFQI  236 (286)
T ss_dssp             CCCSBCCCSEECCBCTT------------------------SCB--------------CCHH----HHCT----TSCHHH
T ss_pred             CcCCcchhhHHHHHHhc------------------------cCC--------------CChh----hccc----CCCHHH
Confidence            76442100000000000                        000              0000    0001    112346


Q ss_pred             HHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          166 LIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                      ..++.+||+.||++| |+.++++.|......
T Consensus       237 ~~li~~~l~~dP~~R-s~~el~~~L~~~~~~  266 (286)
T 3uqc_A          237 SAVAARSVQGDGGIR-SASTLLNLMQQATAV  266 (286)
T ss_dssp             HHHHHHHHCTTSSCC-CHHHHHHHHHHHHC-
T ss_pred             HHHHHHHcccCCccC-CHHHHHHHHHHHhcc
Confidence            789999999999999 999999999885543

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.41  E-value=4.6e-15  Score=130.33  Aligned_cols=79  Identities=15%  Similarity=-0.018  Sum_probs=48.4

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCc
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      ..||||||.|||++.++.+||+|||+++...... ....+.+||+.|++||++.+ .+..++|+|++|++++++.++..+
T Consensus       360 IIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~-~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~  437 (569)
T 4azs_A          360 FWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDC-SWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN  437 (569)
T ss_dssp             CEESCCCGGGEEECTTSCEEECCCTTEESCC----CCSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred             ceeccCchHhEEECCCCCEEEeecccCeeCCCCC-ccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence            3699999999999999999999999998765322 22345689999999999864 466789999999998877666544


Q ss_pred             c
Q 045790           85 I   85 (231)
Q Consensus        85 ~   85 (231)
                      +
T Consensus       438 ~  438 (569)
T 4azs_A          438 W  438 (569)
T ss_dssp             H
T ss_pred             h
Confidence            4

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=98.91  E-value=8.7e-11  Score=102.57  Aligned_cols=78  Identities=12%  Similarity=0.020  Sum_probs=62.1

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCc------eeEeeccccccchhhhhh--CCCCCCcccHhHHHHHHH
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPK------TIMLVGTLAYMASEYIST--GRVSKELDVFSFRVVALE   77 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~------~~~~~g~~~y~aPE~~~~--~~~~~~~Dv~s~G~vl~e   77 (231)
                      .||||||+|||++.  .+||+|||+++.........      .....||+.|+|||++..  ..|+...|+|+..+-..+
T Consensus       453 iHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~  530 (540)
T 3en9_A          453 IHNDLTTSNFIFDK--DLYIIDFGLGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMK  530 (540)
T ss_dssp             ECTTCCTTSEEESS--SEEECCCTTCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHH
T ss_pred             ccCCCCHHHEEECC--eEEEEECccCEECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence            59999999999998  99999999998765321111      134678999999999976  457777899999988888


Q ss_pred             HHhCCCcc
Q 045790           78 IATGRKVI   85 (231)
Q Consensus        78 l~~g~~p~   85 (231)
                      .+.++.+|
T Consensus       531 ~v~~r~rY  538 (540)
T 3en9_A          531 DVERRARY  538 (540)
T ss_dssp             HHHTCSCC
T ss_pred             HHHhcccc
Confidence            87777665

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=98.22  E-value=4.1e-07  Score=72.82  Aligned_cols=38  Identities=8%  Similarity=-0.207  Sum_probs=31.8

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhh
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIS   58 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~   58 (231)
                      .||||||.|||++ ++.+||+|||+++...              .+.|||++.
T Consensus       215 iHrDlkp~NILl~-~~~vkl~DFG~a~~~~--------------~~~a~e~l~  252 (282)
T 1zar_A          215 VHGDLSQYNVLVS-EEGIWIIDFPQSVEVG--------------EEGWREILE  252 (282)
T ss_dssp             ECSCCSTTSEEEE-TTEEEECCCTTCEETT--------------STTHHHHHH
T ss_pred             EeCCCCHHHEEEE-CCcEEEEECCCCeECC--------------CCCHHHHHH
Confidence            5999999999999 9999999999986532              367888763

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=97.61  E-value=3.2e-05  Score=60.78  Aligned_cols=27  Identities=11%  Similarity=-0.235  Sum_probs=24.6

Q ss_pred             eecCCCCCCeeeCCCCcEEEecccccccc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLM   34 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~   34 (231)
                      .||||||.|||++.  .++|+|||++...
T Consensus       193 vHrDlkp~NILl~~--~~~liDFG~a~~~  219 (258)
T 1zth_A          193 VHADLSEYNIMYID--KVYFIDMGQAVTL  219 (258)
T ss_dssp             ECSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred             EeCCCCHHHEEEcC--cEEEEECcccccC
Confidence            49999999999998  8999999998764

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=95.27  E-value=0.0051  Score=51.23  Aligned_cols=28  Identities=4%  Similarity=-0.380  Sum_probs=22.9

Q ss_pred             eeecCCCCCCeeeCCCC----------cEEEecccccc
Q 045790            5 AYSRSPELPPGRGDFNF----------NAKLGDFGLAR   32 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~----------~~kl~Dfg~~~   32 (231)
                      ..||||||.|||++.++          .+.|+||+=+.
T Consensus       226 IVHrDLKp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V  263 (397)
T 4gyi_A          226 LIHGDFNEFNILIREEKDAEDPSSITLTPIIIXFPQMV  263 (397)
T ss_dssp             EECSCCSTTSEEEEEEECSSCTTSEEEEEEECCCTTCE
T ss_pred             CcCCCCCHHHEEEeCCCCcccccccccceEEEEeCCcc
Confidence            35999999999998766          37899998554

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=94.64  E-value=0.0028  Score=50.63  Aligned_cols=82  Identities=12%  Similarity=-0.048  Sum_probs=48.2

Q ss_pred             eeecCCCCCCeeeCC--CCcEEEeccccccccCCCCCC--cee-----------Eeeccccccc-hhhhhhCCCCCCccc
Q 045790            5 AYSRSPELPPGRGDF--NFNAKLGDFGLARLMDHELGP--KTI-----------MLVGTLAYMA-SEYISTGRVSKELDV   68 (231)
Q Consensus         5 ~~~rdlk~~nil~~~--~~~~kl~Dfg~~~~~~~~~~~--~~~-----------~~~g~~~y~a-PE~~~~~~~~~~~Dv   68 (231)
                      ..|+|+++.||+++.  +..+.|+||+.+..-......  ...           .....++... |+.....  ..-.+.
T Consensus       193 ~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~~~~~~~~~r~--~~~~~~  270 (304)
T 3sg8_A          193 LIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKHKDIPTVLEKY--RMKEKY  270 (304)
T ss_dssp             EECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTCSCHHHHHHHH--HHHHHH
T ss_pred             eEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCCCCcHHHHHHH--HHHHHH
Confidence            459999999999997  556789999987543210000  000           0000011111 2222111  111468


Q ss_pred             HhHHHHHHHHHhCCCccccc
Q 045790           69 FSFRVVALEIATGRKVINRY   88 (231)
Q Consensus        69 ~s~G~vl~el~~g~~p~~~~   88 (231)
                      |+++.+++.+.+|..+|...
T Consensus       271 ~~l~~~~~~~~~g~~~~~~~  290 (304)
T 3sg8_A          271 WSFEKIIYGKEYGYMDWYEE  290 (304)
T ss_dssp             HHHHHHHHHHHTTCHHHHHH
T ss_pred             HHHHHHHHHHHcCCHHHHHH
Confidence            99999999999999888643

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=94.43  E-value=0.013  Score=45.17  Aligned_cols=29  Identities=14%  Similarity=-0.054  Sum_probs=24.2

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccc
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARL   33 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~   33 (231)
                      -.|+|+++.||+++.+..+.|+||+.+..
T Consensus       186 l~HgDl~~~Nil~~~~~~~~liD~~~a~~  214 (264)
T 1nd4_A          186 VTHGDACLPNIMVENGRFSGFIDCGRLGV  214 (264)
T ss_dssp             EECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             EECCCCCCCcEEEECCcEEEEEcchhccc
Confidence            45999999999998776677999997643

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=92.68  E-value=0.055  Score=41.85  Aligned_cols=28  Identities=7%  Similarity=-0.281  Sum_probs=23.2

Q ss_pred             eeecCCCCCCeeeCCCCcEEEecccccc
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLAR   32 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~   32 (231)
                      ..|+|+++.||+++.+..+.|+||+.+.
T Consensus       185 l~HgDl~~~Nil~~~~~~~~lIDwe~a~  212 (263)
T 3tm0_A          185 FSHGDLGDSNIFVKDGKVSGFIDLGRSG  212 (263)
T ss_dssp             EECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred             EECCCCCcCcEEEECCcEEEEEEchhcc
Confidence            4599999999999876566799998763

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=90.73  E-value=0.097  Score=42.60  Aligned_cols=29  Identities=14%  Similarity=-0.109  Sum_probs=23.9

Q ss_pred             eeecCCCCCCeeeCCCCc--EEEeccccccc
Q 045790            5 AYSRSPELPPGRGDFNFN--AKLGDFGLARL   33 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~--~kl~Dfg~~~~   33 (231)
                      -.|+|+++.||+++.++.  +.|+||+.+..
T Consensus       218 lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~  248 (359)
T 3dxp_A          218 IVHGDYRLDNLMFHPTEPRVLAVLDWELSTL  248 (359)
T ss_dssp             EECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred             EEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence            459999999999987643  68999998754

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=89.40  E-value=0.15  Score=40.77  Aligned_cols=29  Identities=7%  Similarity=-0.205  Sum_probs=24.8

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccc
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARL   33 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~   33 (231)
                      -.|+|+.+.||+++.++.+.|+||+.+..
T Consensus       224 l~HgD~~~~Nil~~~~~~~~lIDfe~a~~  252 (346)
T 2q83_A          224 LCHQDYGTGNTLLGENEQIWVIDLDTVSF  252 (346)
T ss_dssp             EECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred             eecCCCCcccEEEeCCCcEEEEehhhccc
Confidence            35999999999998778899999987643

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=86.94  E-value=0.25  Score=41.15  Aligned_cols=29  Identities=3%  Similarity=-0.215  Sum_probs=24.7

Q ss_pred             eeeecCCCCCCeeeCCCCcEEEeccccccc
Q 045790            4 VAYSRSPELPPGRGDFNFNAKLGDFGLARL   33 (231)
Q Consensus         4 ~~~~rdlk~~nil~~~~~~~kl~Dfg~~~~   33 (231)
                      .-.|+|+++.||+++.++ ++|+||+.+..
T Consensus       233 ~liHGDl~~~Nil~~~~~-~~lID~e~a~~  261 (420)
T 2pyw_A          233 ALIHGDLHTGSVMVTQDS-TQVIDPEFSFY  261 (420)
T ss_dssp             EEECSCCSGGGEEECSSC-EEECCCTTCEE
T ss_pred             eEEecCCCCCcEEEeCCC-CEEEeCccccc
Confidence            345999999999998766 99999988754

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=85.52  E-value=0.43  Score=36.85  Aligned_cols=28  Identities=14%  Similarity=-0.240  Sum_probs=23.8

Q ss_pred             eeecCCCCCCeeeCCCCcEEEecccccc
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLAR   32 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~   32 (231)
                      -.|.|+.+.||+++.++.+-|+||+.+.
T Consensus       195 l~HGDl~~~Nil~~~~~~~~viDwe~a~  222 (272)
T 4gkh_A          195 VTHGDFSLDNLIFDEGKLIGCIDVGRVG  222 (272)
T ss_dssp             EECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred             EEcCCCCCCeEEEECCeEEEEEECcccc
Confidence            3599999999999987777899998764

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=83.96  E-value=0.32  Score=38.69  Aligned_cols=28  Identities=14%  Similarity=-0.312  Sum_probs=23.3

Q ss_pred             eeecCCCCCCeeeCCCCcEEEecccccc
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLAR   32 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~   32 (231)
                      ..|+|+.+.||+++.+..+.|+||+.+.
T Consensus       189 liHgDl~~~Nil~~~~~~~~lIDf~~a~  216 (322)
T 2ppq_A          189 VIHADLFQDNVFFLGDELSGLIDFYFAC  216 (322)
T ss_dssp             EECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred             cCCCCCCccCEEEeCCceEEEecchhcc
Confidence            4599999999999877666899998764

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=83.33  E-value=0.57  Score=37.20  Aligned_cols=29  Identities=14%  Similarity=0.016  Sum_probs=23.3

Q ss_pred             eeecCCCCCCeeeCC---CCc-EEEeccccccc
Q 045790            5 AYSRSPELPPGRGDF---NFN-AKLGDFGLARL   33 (231)
Q Consensus         5 ~~~rdlk~~nil~~~---~~~-~kl~Dfg~~~~   33 (231)
                      ..|+|+++.||+++.   ++. +.|+||+.+..
T Consensus       192 ~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~  224 (306)
T 3tdw_A          192 LIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI  224 (306)
T ss_dssp             EECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred             eEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence            369999999999987   344 58999987644

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=80.91  E-value=0.72  Score=36.88  Aligned_cols=30  Identities=20%  Similarity=-0.087  Sum_probs=24.8

Q ss_pred             eeeecCCCCCCeeeCCC----CcEEEeccccccc
Q 045790            4 VAYSRSPELPPGRGDFN----FNAKLGDFGLARL   33 (231)
Q Consensus         4 ~~~~rdlk~~nil~~~~----~~~kl~Dfg~~~~   33 (231)
                      +..|+|+.+.||+++.+    ..+.|+||+.+..
T Consensus       184 ~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~  217 (333)
T 3csv_A          184 VFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL  217 (333)
T ss_dssp             EEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred             eeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence            34599999999999864    6789999987754

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=80.62  E-value=0.58  Score=37.78  Aligned_cols=29  Identities=7%  Similarity=-0.169  Sum_probs=23.5

Q ss_pred             eeecCCCCCCeeeCCCCcEEEeccccccc
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLARL   33 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~~   33 (231)
                      ..|+|+.+.||+++.+..+.|+||+.+..
T Consensus       224 l~HgDl~~~Nil~~~~~~~~vIDwe~a~~  252 (357)
T 3ats_A          224 LLWGDARVGNVLYRDFQPVAVLDWEMVAL  252 (357)
T ss_dssp             EECSSCSGGGEEEETTEEEEECCGGGCEE
T ss_pred             EEeCCCCCCeEEEeCCcEEEEEccccccc
Confidence            45999999999999644578999987643

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	231
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	4e-14
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	2e-12
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	3e-12
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	7e-12
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	1e-11
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	2e-11
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	3e-11
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	3e-11
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	5e-11
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	1e-10
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	4e-10
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	4e-10
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	5e-10
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	8e-10
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	9e-10
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	1e-09
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	1e-09
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	2e-09
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	2e-09
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	2e-09
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	6e-09
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	1e-08
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	1e-08
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	1e-08
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	1e-08
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	1e-08
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	2e-08
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	3e-08
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	3e-08
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	5e-08
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	6e-08
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	6e-08
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	7e-08
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	1e-07
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	2e-07
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	4e-07
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	5e-07
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	5e-07
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	5e-07
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	7e-07
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	7e-07
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	1e-06
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	1e-06
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	1e-06
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	2e-06
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	3e-06
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	5e-06
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	6e-06
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	1e-05
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	2e-05
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	2e-05
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	5e-05
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	1e-04
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	2e-04
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	2e-04
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	2e-04
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	3e-04
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	0.001

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.8 bits (165), Expect = 4e-14
 Identities = 29/171 (16%), Positives = 55/171 (32%), Gaps = 12/171 (7%)

Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALE 77
           +     KL DFG++  +           VGT +YM+ E +     S + D++S  +  +E
Sbjct: 139 NSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVE 195

Query: 78  IATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVW 137
           +A GR  I    A++L   F          +  +    G      G        +   + 
Sbjct: 196 MAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLD 255

Query: 138 DLYGERKLLSAANERLDSRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQ 188
            +  E      +        D        +      +P    R  ++Q + 
Sbjct: 256 YIVNEPPPKLPSGVFSLEFQD-------FVNKCLIKNPAE--RADLKQLMV 297

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.1 bits (153), Expect = 2e-12
 Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 4/70 (5%)

Query: 18  DFNFNAKLGDFGLARLMDHELGP-KTIMLVGTLAYMASEYIST---GRVSKELDVFSFRV 73
             +   K+GDFGLA +     G  +   L G++ +MA E I        S + DV++F +
Sbjct: 138 HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGI 197

Query: 74  VALEIATGRK 83
           V  E+ TG+ 
Sbjct: 198 VLYELMTGQL 207

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.9 bits (150), Expect = 3e-12
 Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 4/66 (6%)

Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALE 77
               + K+GD GLA L           ++GT  +MA E     +  + +DV++F +  LE
Sbjct: 149 GPTGSVKIGDLGLATLKRASF---AKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLE 204

Query: 78  IATGRK 83
           +AT   
Sbjct: 205 MATSEY 210

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.1 bits (148), Expect = 7e-12
 Identities = 16/65 (24%), Positives = 27/65 (41%), Gaps = 3/65 (4%)

Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALE 77
                 K+ DFG +         +   L GTL Y+  E I      +++D++S  V+  E
Sbjct: 140 GSAGELKIADFGWSVHAPSS---RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 196

Query: 78  IATGR 82
              G+
Sbjct: 197 FLVGK 201

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.5 bits (146), Expect = 1e-11
 Identities = 19/66 (28%), Positives = 31/66 (46%)

Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALE 77
             N   K+ DFGLARL++             + + A E    GR + + DV+SF ++  E
Sbjct: 147 GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE 206

Query: 78  IATGRK 83
           + T  +
Sbjct: 207 LTTKGR 212

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.8 bits (144), Expect = 2e-11
 Identities = 29/188 (15%), Positives = 57/188 (30%), Gaps = 53/188 (28%)

Query: 18  DFNFNAKLGDFGLARLM--DHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVA 75
           + N   K+ DFGL+R++  D E    T      + + A E IS  + +   DV+SF +V 
Sbjct: 144 NSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVM 203

Query: 76  LEIATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAW 135
            E+ T  +                                                    
Sbjct: 204 WEVMTYGE---------------------------------------------------R 212

Query: 136 VWDLYGERKLLSAANERLDSRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETT 195
            +      +++ A N+           + +  + + C   +R  RP     + +L+    
Sbjct: 213 PYWELSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIR 272

Query: 196 MPNLPSKM 203
            P+    +
Sbjct: 273 APDSLKTL 280

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.9 bits (144), Expect = 3e-11
 Identities = 30/183 (16%), Positives = 54/183 (29%), Gaps = 40/183 (21%)

Query: 18  DFNFNAKLGDFGLARLMDHE---LGPKTIMLVGTLAYMASEYIST------GRVSKELDV 68
             N    + D GLA   D     +       VGT  YMA E +            K  D+
Sbjct: 142 KKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADI 201

Query: 69  FSFRVVALEIATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNY 128
           ++  +V  EIA    +   ++  +L    +VP   S          E  K V     +  
Sbjct: 202 YAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVE--------EMRKVVCEQKLRPN 253

Query: 129 CPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQ 188
            P                       +     + +  +  +   C + +   R +  +  +
Sbjct: 254 IP-----------------------NRWQSCEALRVMAKIMRECWYANGAARLTALRIKK 290

Query: 189 VLN 191
            L+
Sbjct: 291 TLS 293

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.3 bits (143), Expect = 3e-11
 Identities = 17/66 (25%), Positives = 30/66 (45%)

Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALE 77
             N   K+ DFG+ R +  +    +      + + + E  S  R S + DV+SF V+  E
Sbjct: 135 GENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWE 194

Query: 78  IATGRK 83
           + +  K
Sbjct: 195 VFSEGK 200

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.8 bits (142), Expect = 5e-11
 Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALE 77
           D   N KLGDFGLAR+++H+        VGT  YM+ E ++    +++ D++S   +  E
Sbjct: 148 DGKQNVKLGDFGLARILNHD-TSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYE 206

Query: 78  IATGR 82
           +    
Sbjct: 207 LCALM 211

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.4 bits (138), Expect = 1e-10
 Identities = 14/66 (21%), Positives = 31/66 (46%)

Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALE 77
           +     K+ DFGL+R +  +    ++     + +   E +   + S + D+++F V+  E
Sbjct: 134 NDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWE 193

Query: 78  IATGRK 83
           I +  K
Sbjct: 194 IYSLGK 199

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.3 bits (135), Expect = 4e-10
 Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 3/69 (4%)

Query: 18  DFNFNAKLGDFGLARLM---DHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVV 74
           D  F  K+ DFGLAR M   + +           + +MA E + T + + + DV+SF V+
Sbjct: 164 DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVL 223

Query: 75  ALEIATGRK 83
             E+ T   
Sbjct: 224 LWELMTRGA 232

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.2 bits (135), Expect = 4e-10
 Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 1/65 (1%)

Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALE 77
             + + KL DFG    +  E   K   +VGT  +MA E ++      ++D++S  ++A+E
Sbjct: 150 GMDGSVKLTDFGFCAQITPE-QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIE 208

Query: 78  IATGR 82
           +  G 
Sbjct: 209 MIEGE 213

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.8 bits (134), Expect = 5e-10
 Identities = 19/64 (29%), Positives = 32/64 (50%)

Query: 20  NFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIA 79
             + K+ DFGLARL++             + + A E I+ G  + + DV+SF ++  EI 
Sbjct: 145 TLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 204

Query: 80  TGRK 83
           T  +
Sbjct: 205 THGR 208

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.6 bits (133), Expect = 8e-10
 Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 2/66 (3%)

Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALE 77
             N+ AK+ DFGL+R  +  +  K  M    + +MA E ++    +   DV+S+ V+  E
Sbjct: 161 GENYVAKIADFGLSRGQEVYV--KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWE 218

Query: 78  IATGRK 83
           I +   
Sbjct: 219 IVSLGG 224

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.0 bits (132), Expect = 9e-10
 Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 2/71 (2%)

Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIM-LVGTLAYMASEYISTGRV-SKELDVFSFRVVA 75
           D   N K+ DFGLA +  +    + +  + GTL Y+A E +      ++ +DV+S  +V 
Sbjct: 137 DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 196

Query: 76  LEIATGRKVIN 86
             +  G    +
Sbjct: 197 TAMLAGELPWD 207

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.2 bits (132), Expect = 1e-09
 Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 1/67 (1%)

Query: 18  DFNFNAKLGDFGLARLMD-HELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVAL 76
               + K+ DFGLA+L+   E           + +MA E I     + + DV+S+ V   
Sbjct: 145 KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVW 204

Query: 77  EIATGRK 83
           E+ T   
Sbjct: 205 ELMTFGS 211

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.7 bits (131), Expect = 1e-09
 Identities = 17/68 (25%), Positives = 30/68 (44%), Gaps = 2/68 (2%)

Query: 18  DFNFNAKLGDFGLARLM--DHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVA 75
                AK+ DFGL++ +  D             + + A E I+  + S + DV+SF V+ 
Sbjct: 141 VTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLM 200

Query: 76  LEIATGRK 83
            E  +  +
Sbjct: 201 WEAFSYGQ 208

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 54.2 bits (130), Expect = 2e-09
 Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 8/68 (11%)

Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIST---GRVSKELDVFSFRVV 74
                 KLGDFG A +M           VGT  +MA E I     G+   ++DV+S  + 
Sbjct: 149 SEPGLVKLGDFGSASIMA-----PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 203

Query: 75  ALEIATGR 82
            +E+A  +
Sbjct: 204 CIELAERK 211

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.0 bits (129), Expect = 2e-09
 Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 2/67 (2%)

Query: 16  RGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVA 75
           R       K+ DFGLA  +D   G +   + GT  ++A E ++   +  E D++S  V+ 
Sbjct: 149 RNVPKPRIKIIDFGLAHKIDF--GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVIT 206

Query: 76  LEIATGR 82
             + +G 
Sbjct: 207 YILLSGA 213

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 54.1 bits (129), Expect = 2e-09
 Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 1/67 (1%)

Query: 18  DFNFNAKLGDFGLARLM-DHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVAL 76
             N   K+ DFGL+R +   +           + +M  E I   R + E DV+++ VV  
Sbjct: 174 GENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLW 233

Query: 77  EIATGRK 83
           EI +   
Sbjct: 234 EIFSYGL 240

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 52.8 bits (126), Expect = 6e-09
 Identities = 16/70 (22%), Positives = 33/70 (47%), Gaps = 4/70 (5%)

Query: 18  DFNFNAKLGDFGLARLMDHELGPKT----IMLVGTLAYMASEYISTGRVSKELDVFSFRV 73
           + N   K+ DFGL+R ++ +    T    +     + + A E I   + +   DV+S+ +
Sbjct: 162 NSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGI 221

Query: 74  VALEIATGRK 83
           V  E+ +  +
Sbjct: 222 VMWEVMSYGE 231

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 52.1 bits (124), Expect = 1e-08
 Identities = 16/107 (14%), Positives = 33/107 (30%), Gaps = 6/107 (5%)

Query: 12  LPPGRGDFNFNAKLGDFGLARLMDHELGPKTIM------LVGTLAYMASEYISTGRVSKE 65
           +            + DFG+ +     +  + I       L GT  YM+         S+ 
Sbjct: 134 IGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRR 193

Query: 66  LDVFSFRVVALEIATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKL 112
            D+ +   V +    G       KA   + ++        +  + +L
Sbjct: 194 DDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLREL 240

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 52.4 bits (125), Expect = 1e-08
 Identities = 16/65 (24%), Positives = 27/65 (41%), Gaps = 2/65 (3%)

Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALE 77
             +   KL DFGL   +D +      +  GT  + A E      V    D++S  V++  
Sbjct: 160 KRSNELKLIDFGLTAHLDPK--QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYI 217

Query: 78  IATGR 82
           + +G 
Sbjct: 218 LLSGL 222

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.1 bits (124), Expect = 1e-08
 Identities = 22/66 (33%), Positives = 29/66 (43%)

Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALE 77
             N   KLGDFGL+R M+     K       + +MA E I+  R +   DV+ F V   E
Sbjct: 142 SSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWE 201

Query: 78  IATGRK 83
           I     
Sbjct: 202 ILMHGV 207

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 52.0 bits (124), Expect = 1e-08
 Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 2/65 (3%)

Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALE 77
           D +    + DFGL+++ D   G       GT  Y+A E ++    SK +D +S  V+A  
Sbjct: 144 DEDSKIMISDFGLSKMEDP--GSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYI 201

Query: 78  IATGR 82
           +  G 
Sbjct: 202 LLCGY 206

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.7 bits (123), Expect = 1e-08
 Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 1/65 (1%)

Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALE 77
           D + + K+ DFGL +    + G       GT  Y+A E +      + +D +   VV  E
Sbjct: 139 DKDGHIKITDFGLCKEGISD-GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYE 197

Query: 78  IATGR 82
           +  GR
Sbjct: 198 MMCGR 202

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.2 bits (122), Expect = 2e-08
 Identities = 13/64 (20%), Positives = 31/64 (48%), Gaps = 1/64 (1%)

Query: 20  NFNAKLGDFGLARLMDHE-LGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEI 78
           + + ++ DFG A+++  E    +    VGT  Y++ E ++     K  D+++   +  ++
Sbjct: 144 DMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQL 203

Query: 79  ATGR 82
             G 
Sbjct: 204 VAGL 207

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 50.9 bits (121), Expect = 3e-08
 Identities = 20/66 (30%), Positives = 32/66 (48%)

Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALE 77
             N   K+ DFGL+RLM  +           + + A E ++  + S + DV++F V+  E
Sbjct: 149 GENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 208

Query: 78  IATGRK 83
           IAT   
Sbjct: 209 IATYGM 214

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 50.8 bits (121), Expect = 3e-08
 Identities = 13/67 (19%), Positives = 26/67 (38%), Gaps = 2/67 (2%)

Query: 16  RGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVA 75
                 + K+ DFGLA  ++        +   T  + A E +    V    D+++  V+ 
Sbjct: 161 ETKKASSVKIIDFGLATKLNP--DEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLG 218

Query: 76  LEIATGR 82
             + +G 
Sbjct: 219 YVLLSGL 225

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.1 bits (119), Expect = 5e-08
 Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 1/65 (1%)

Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALE 77
           D + + K+ DFG+ +              GT  Y+A E +   + +  +D +SF V+  E
Sbjct: 137 DKDGHIKIADFGMCKENMLGDAKTN-TFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYE 195

Query: 78  IATGR 82
           +  G+
Sbjct: 196 MLIGQ 200

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.6 bits (118), Expect = 6e-08
 Identities = 15/66 (22%), Positives = 28/66 (42%), Gaps = 4/66 (6%)

Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALE 77
             +  AK+ DFGL +                + + A E +   + S + DV+SF ++  E
Sbjct: 137 SEDNVAKVSDFGLTKEASS----TQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWE 192

Query: 78  IATGRK 83
           I +  +
Sbjct: 193 IYSFGR 198

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.0 bits (119), Expect = 6e-08
 Identities = 13/65 (20%), Positives = 24/65 (36%), Gaps = 2/65 (3%)

Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALE 77
             +   K+ +FG AR +      + +       Y A E      VS   D++S   +   
Sbjct: 138 RRSSTIKIIEFGQARQLKPGDNFRLLF--TAPEYYAPEVHQHDVVSTATDMWSLGTLVYV 195

Query: 78  IATGR 82
           + +G 
Sbjct: 196 LLSGI 200

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.6 bits (118), Expect = 7e-08
 Identities = 15/70 (21%), Positives = 28/70 (40%), Gaps = 6/70 (8%)

Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIST-----GRVSKELDVFSFR 72
             + + KL DFG++         +    +GT  +MA E +            + DV+S  
Sbjct: 144 TLDGDIKLADFGVSAKNTRT-IQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLG 202

Query: 73  VVALEIATGR 82
           +  +E+A   
Sbjct: 203 ITLIEMAEIE 212

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.5 bits (115), Expect = 1e-07
 Identities = 18/86 (20%), Positives = 29/86 (33%), Gaps = 5/86 (5%)

Query: 20  NFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRV-SKELDVFSFRVVALEI 78
               KL DFG   L+            GT  Y   E+I   R   +   V+S  ++  ++
Sbjct: 147 RGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDM 203

Query: 79  ATGRKVINRYKAQKLRTQFVVPHPCS 104
             G       + + +R Q       S
Sbjct: 204 VCGDIPFEHDE-EIIRGQVFFRQRVS 228

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.2 bits (114), Expect = 2e-07
 Identities = 17/68 (25%), Positives = 28/68 (41%), Gaps = 2/68 (2%)

Query: 18  DFNFNAKLGDFGLARLM--DHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVA 75
                AK+ DFGL++ +  D             L + A E I+  + S   DV+S+ V  
Sbjct: 143 VNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTM 202

Query: 76  LEIATGRK 83
            E  +  +
Sbjct: 203 WEALSYGQ 210

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 47.4 bits (112), Expect = 4e-07
 Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 4/66 (6%)

Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALE 77
           D N + K+ DFG A+ +       T  L GT  Y+A E +ST   +K +D +SF ++  E
Sbjct: 138 DKNGHIKITDFGFAKYVPD----VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYE 193

Query: 78  IATGRK 83
           +  G  
Sbjct: 194 MLAGYT 199

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.2 bits (111), Expect = 5e-07
 Identities = 31/171 (18%), Positives = 61/171 (35%), Gaps = 28/171 (16%)

Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALE 77
             +   KL DFGLAR+   ++   ++  V TL Y A E +     +  +D++S   +  E
Sbjct: 150 TSSGQIKLADFGLARIYSFQMALTSV--VVTLWYRAPEVLLQSSYATPVDLWSVGCIFAE 207

Query: 78  IATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVW 137
           +   +                     S+        ++    V+G   +   P+ VA   
Sbjct: 208 MFRRK----------------PLFRGSSDVDQLGKILD----VIGLPGEEDWPRDVALPR 247

Query: 138 DLYGERKLLSAANERLDSRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQ 188
             +  +   +   E+  +  DE      L++     +P +  R S   A+ 
Sbjct: 248 QAFHSKS--AQPIEKFVTDIDELGKD--LLLKCLTFNPAK--RISAYSALS 292

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.2 bits (111), Expect = 5e-07
 Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 1/67 (1%)

Query: 18  DFNFNAKLGDFGLARLMDHELGP-KTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVAL 76
                 K+ DFGLAR +  +    +       L +MA E I     + + DV+SF V+  
Sbjct: 168 SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLW 227

Query: 77  EIATGRK 83
           EI +   
Sbjct: 228 EIFSLGA 234

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.2 bits (111), Expect = 5e-07
 Identities = 17/69 (24%), Positives = 26/69 (37%), Gaps = 4/69 (5%)

Query: 18  DFNFNAKLGDFGLARLMD---HELGPKTIMLVGTLAYMASEYISTGR-VSKELDVFSFRV 73
             +   KL DFGLAR      +    +    V TL Y   E +   R     +D++    
Sbjct: 151 TRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGC 210

Query: 74  VALEIATGR 82
           +  E+ T  
Sbjct: 211 IMAEMWTRS 219

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.7 bits (110), Expect = 7e-07
 Identities = 16/67 (23%), Positives = 29/67 (43%), Gaps = 1/67 (1%)

Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIM-LVGTLAYMASEYISTGRVSKELDVFSFRVVAL 76
                 K+ DFGLAR +  +            + +MA E +  G  + + DV+S+ ++  
Sbjct: 198 THGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLW 257

Query: 77  EIATGRK 83
           EI +   
Sbjct: 258 EIFSLGV 264

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.7 bits (110), Expect = 7e-07
 Identities = 17/68 (25%), Positives = 25/68 (36%), Gaps = 2/68 (2%)

Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIM--LVGTLAYMASEYISTGRVSKELDVFSFRVVA 75
                 K+GDFGL R +        +        A+ A E + T   S   D + F V  
Sbjct: 145 ATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTL 204

Query: 76  LEIATGRK 83
            E+ T  +
Sbjct: 205 WEMFTYGQ 212

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.0 bits (108), Expect = 1e-06
 Identities = 36/173 (20%), Positives = 54/173 (31%), Gaps = 29/173 (16%)

Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRV-SKELDVFSFRVVAL 76
           D N   KL DFGLA+         T   V T  Y A E +   R+    +D+++   +  
Sbjct: 134 DENGVLKLADFGLAKSFGSPNRAYTHQ-VVTRWYRAPELLFGARMYGVGVDMWAVGCILA 192

Query: 77  EIATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWV 136
           E+                       P  +         E     LG  ++   P     +
Sbjct: 193 ELLLRV----------------PFLPGDSDLDQLTRIFE----TLGTPTEEQWPD----M 228

Query: 137 WDLYGERKLLSAANERLDSRFDEQQMTCL-LIVGLWCAHPDRCFRPSIRQAIQ 188
             L       S     L   F       L LI GL+  +P    R +  QA++
Sbjct: 229 CSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCA--RITATQALK 279

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 45.8 bits (108), Expect = 1e-06
 Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 8/71 (11%)

Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRV------SKELDVFSF 71
           D + N KL DFG +  +D   G K   + GT +Y+A E I            KE+D++S 
Sbjct: 144 DDDMNIKLTDFGFSCQLDP--GEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWST 201

Query: 72  RVVALEIATGR 82
            V+   +  G 
Sbjct: 202 GVIMYTLLAGS 212

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 45.6 bits (107), Expect = 1e-06
 Identities = 22/105 (20%), Positives = 33/105 (31%), Gaps = 6/105 (5%)

Query: 14  PGRGDFNFNAKLGDFGLARLMDHELGPKTIM------LVGTLAYMASEYISTGRVSKELD 67
            G G       + DFGLA+        + I       L GT  Y +         S+  D
Sbjct: 136 MGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDD 195

Query: 68  VFSFRVVALEIATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKL 112
           + S   V +    G       KA   R ++        +  +E L
Sbjct: 196 LESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 45.3 bits (106), Expect = 2e-06
 Identities = 29/172 (16%), Positives = 54/172 (31%), Gaps = 26/172 (15%)

Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYI-STGRVSKELDVFSFRVVAL 76
           +     K+ DFGLAR        K    + TL Y A + +  + + S  +D++S   +  
Sbjct: 134 NREGELKIADFGLARAFGIP-VRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFA 192

Query: 77  EIATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWV 136
           E+  G                    P  +              +LG  +    P +    
Sbjct: 193 EMVNGT----------------PLFPGVSEADQLMRIFR----ILGTPNSKNWPNVTELP 232

Query: 137 WDLYGERKLLSAANERLDSRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQ 188
                         E      DE  +   L+  +    P++  R + +QA++
Sbjct: 233 KYDPNFTVYEPLPWESFLKGLDESGID--LLSKMLKLDPNQ--RITAKQALE 280

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.5 bits (104), Expect = 3e-06
 Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 1/67 (1%)

Query: 18  DFNFNAKLGDFGLARLMDH-ELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVAL 76
             +   K+ DFGLAR + H +   KT      + +MA E +     + + DV+SF V+  
Sbjct: 169 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLW 228

Query: 77  EIATGRK 83
           EI T   
Sbjct: 229 EIFTLGG 235

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.1 bits (103), Expect = 5e-06
 Identities = 34/172 (19%), Positives = 57/172 (33%), Gaps = 26/172 (15%)

Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASE-YISTGRVSKELDVFSFRVVAL 76
           +     KL DFGLAR     +   T   V TL Y A E  +     S  +D++S   +  
Sbjct: 136 NTEGAIKLADFGLARAFGVPVRTYT-HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFA 194

Query: 77  EIATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWV 136
           E+ T R +            F           + +     ++ V  G +     K     
Sbjct: 195 EMVTRRAL------------FPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK 242

Query: 137 WDLYGERKLLSAANERLDSRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQ 188
           W      K++   +E   S          L+  +    P++  R S + A+ 
Sbjct: 243 WARQDFSKVVPPLDEDGRS----------LLSQMLHYDPNK--RISAKAALA 282

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.7 bits (102), Expect = 6e-06
 Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)

Query: 18  DFNFNAKLGDFGLARLM-DHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVAL 76
             +F  K+GDFG+ R + + +   K    +  + +M+ E +  G  +   DV+SF VV  
Sbjct: 167 AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLW 226

Query: 77  EIATGRK 83
           EIAT  +
Sbjct: 227 EIATLAE 233

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 43.2 bits (101), Expect = 1e-05
 Identities = 18/66 (27%), Positives = 27/66 (40%), Gaps = 4/66 (6%)

Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGR-VSKELDVFSFRVVAL 76
           D + + ++ D GLA     +   K    VGT  YMA E +  G       D FS   +  
Sbjct: 141 DEHGHVRISDLGLACDFSKK---KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLF 197

Query: 77  EIATGR 82
           ++  G 
Sbjct: 198 KLLRGH 203

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.6 bits (99), Expect = 2e-05
 Identities = 26/171 (15%), Positives = 51/171 (29%), Gaps = 23/171 (13%)

Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALE 77
           + N   KL +FGLAR     +   +  +V                S  +D++S   +  E
Sbjct: 135 NRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAE 194

Query: 78  IATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVW 137
           +A   +                  P ++     K               +         +
Sbjct: 195 LANAGR---------------PLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPY 239

Query: 138 DLYGERKLLSAANERLDSRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQ 188
            +Y     L     +L++   +      L+  L   +P +  R S  +A+Q
Sbjct: 240 PMYPATTSLVNVVPKLNATGRD------LLQNLLKCNPVQ--RISAEEALQ 282

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 42.4 bits (99), Expect = 2e-05
 Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 2/67 (2%)

Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIM--LVGTLAYMASEYISTGRVSKELDVFSFRVVA 75
                 K+ DFG+AR +       T    ++GT  Y++ E      V    DV+S   V 
Sbjct: 145 SATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVL 204

Query: 76  LEIATGR 82
            E+ TG 
Sbjct: 205 YEVLTGE 211

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.9 bits (95), Expect = 5e-05
 Identities = 16/65 (24%), Positives = 28/65 (43%), Gaps = 1/65 (1%)

Query: 20  NFNAKLGDFGLARLMDHELG-PKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEI 78
               K+ DFGLAR + ++            + +MA E I     + E DV+S+ +   E+
Sbjct: 181 GRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL 240

Query: 79  ATGRK 83
            +   
Sbjct: 241 FSLGS 245

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.5 bits (94), Expect = 1e-04
 Identities = 16/67 (23%), Positives = 24/67 (35%), Gaps = 2/67 (2%)

Query: 16  RGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVA 75
               N   KL DFG A+               T  Y+A E +   +  K  D++S  V+ 
Sbjct: 146 SKRPNAILKLTDFGFAKETTS--HNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 203

Query: 76  LEIATGR 82
             +  G 
Sbjct: 204 YILLCGY 210

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 39.8 bits (92), Expect = 2e-04
 Identities = 11/64 (17%), Positives = 24/64 (37%), Gaps = 3/64 (4%)

Query: 20  NFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASE-YISTGRVSKELDVFSFRVVALEI 78
           +   +L D+GLA       G +  + V +  +   E  +        LD++S   +   +
Sbjct: 166 HRKLRLIDWGLAEFYHP--GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASM 223

Query: 79  ATGR 82
              +
Sbjct: 224 IFRK 227

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.4 bits (91), Expect = 2e-04
 Identities = 20/169 (11%), Positives = 37/169 (21%), Gaps = 25/169 (14%)

Query: 20  NFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIA 79
               KL DFG A+ +       +  +                 +  +DV+S   V  E+ 
Sbjct: 159 TAVLKLCDFGSAKQLVRGEPNVS-YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 217

Query: 80  TGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDL 139
            G+                   P  +        ++          +   P    + +  
Sbjct: 218 LGQP----------------IFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQ 261

Query: 140 YGERKLLSAANERLDSRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQ 188
                       R             L   L    P    R +  +A  
Sbjct: 262 IKAHPWTKVFRPRTPPEAIA------LCSRLLEYTPTA--RLTPLEACA 302

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.2 bits (90), Expect = 2e-04
 Identities = 16/65 (24%), Positives = 25/65 (38%), Gaps = 2/65 (3%)

Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALE 77
             +   K+ DFGLAR             V T  Y A E I      + +D++S   +  E
Sbjct: 153 KSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 210

Query: 78  IATGR 82
           +   +
Sbjct: 211 MVRHK 215

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.1 bits (90), Expect = 3e-04
 Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 2/67 (2%)

Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGR--VSKELDVFSFRVVA 75
           D N +  L DFGL++    +   +     GT+ YMA + +  G     K +D +S  V+ 
Sbjct: 163 DSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLM 222

Query: 76  LEIATGR 82
            E+ TG 
Sbjct: 223 YELLTGA 229

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.7 bits (84), Expect = 0.001
 Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 4/65 (6%)

Query: 18  DFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALE 77
           D     ++ DFG A+ +      +T  L GT   +A E I +   +K +D ++  V+  E
Sbjct: 175 DQQGYIQVTDFGFAKRVKG----RTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYE 230

Query: 78  IATGR 82
           +A G 
Sbjct: 231 MAAGY 235

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	231
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.96
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.96
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.95
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.95
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.95
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.95
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.95
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.95
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.95
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.95
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.95
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.95
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.95
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.95
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.95
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.94
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.94
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.94
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.94
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.94
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.94
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.94
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.94
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.94
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.94
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.94
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.94
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.94
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.94
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.94
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.94
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.94
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.93
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.93
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.93
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.93
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.93
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.93
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.93
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.93
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.92
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.92
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.92
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.92
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.92
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.92
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.92
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.92
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.92
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.91
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.91
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.91
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.91
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.9
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.9
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.9
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.9
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.9
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.9
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.89
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.88
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.88
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	98.25
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	84.69
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	82.2
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	80.53

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=4.7e-30  Score=203.25  Aligned_cols=133  Identities=16%  Similarity=0.140  Sum_probs=103.6

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+|||++.++.+||+|||+++.....   ......||+.|+|||++.+..++.++||||+||++|+|++|+.||
T Consensus       128 vHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~---~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf  204 (263)
T d2j4za1         128 IHRDIKPENLLLGSAGELKIADFGWSVHAPSS---RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF  204 (263)
T ss_dssp             CCCCCCGGGEEECTTSCEEECCCCSCSCCCCC---CCEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTT
T ss_pred             eeeeeccccceecCCCCEeecccceeeecCCC---cccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCC
Confidence            59999999999999999999999999776432   234567999999999999888999999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      ...........+....                                                 ..+    +......+
T Consensus       205 ~~~~~~~~~~~i~~~~-------------------------------------------------~~~----p~~~s~~~  231 (263)
T d2j4za1         205 EANTYQETYKRISRVE-------------------------------------------------FTF----PDFVTEGA  231 (263)
T ss_dssp             CCSSHHHHHHHHHTTC-------------------------------------------------CCC----CTTSCHHH
T ss_pred             CCCCHHHHHHHHHcCC-------------------------------------------------CCC----CccCCHHH
Confidence            7654332222211100                                                 011    11112346


Q ss_pred             HHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          166 LIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      .+|+.+||+.||++|||+.|+++|+++..
T Consensus       232 ~~li~~~L~~dp~~R~t~~eil~hp~~~~  260 (263)
T d2j4za1         232 RDLISRLLKHNPSQRPMLREVLEHPWITA  260 (263)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHTCHHHHH
T ss_pred             HHHHHHHccCCHhHCcCHHHHHcCcCcCC
Confidence            77899999999999999999999999854

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=5.2e-30  Score=209.00  Aligned_cols=136  Identities=19%  Similarity=0.129  Sum_probs=102.7

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCc-eeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPK-TIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~   83 (231)
                      .||||||+|||++.++.+||+|||+++......... .....||+.|+|||++.+..++.++|||||||++|||++ |..
T Consensus       186 iHRDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~  265 (325)
T d1rjba_         186 VHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVN  265 (325)
T ss_dssp             EETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCC
T ss_pred             eeccCchhccccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCC
Confidence            599999999999999999999999998765433222 234568999999999999999999999999999999997 899


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||.......                                      .+..    ...         ...+...+.....
T Consensus       266 Pf~~~~~~~--------------------------------------~~~~----~~~---------~~~~~~~p~~~~~  294 (325)
T d1rjba_         266 PYPGIPVDA--------------------------------------NFYK----LIQ---------NGFKMDQPFYATE  294 (325)
T ss_dssp             SSTTCCCSH--------------------------------------HHHH----HHH---------TTCCCCCCTTCCH
T ss_pred             CCCCCCHHH--------------------------------------HHHH----HHh---------cCCCCCCCCcCCH
Confidence            997533110                                      1111    110         1111112222335


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      .+.+|+.+||+.||++|||+.||+++|..
T Consensus       295 ~l~~li~~cl~~dP~~RPt~~ei~~~L~~  323 (325)
T d1rjba_         295 EIYIIMQSCWAFDSRKRPSFPNLTSFLGC  323 (325)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCChhHCcCHHHHHHHHhC
Confidence            67889999999999999999999999964

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=7.2e-30  Score=204.38  Aligned_cols=138  Identities=19%  Similarity=0.216  Sum_probs=95.0

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCc--eeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPK--TIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~   83 (231)
                      .||||||+|||++.++.+||+|||+++.+.......  .....|+..|+|||++.+..++.++|||||||++|||+++..
T Consensus       132 iHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~  211 (283)
T d1mqba_         132 VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGE  211 (283)
T ss_dssp             CCSCCCGGGEEECTTCCEEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred             ccCccccceEEECCCCeEEEcccchhhcccCCCccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCC
Confidence            499999999999999999999999998765432221  233467889999999998899999999999999999999765


Q ss_pred             ccccc-hhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           84 VINRY-KAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        84 p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      |+... ...                                       .+...+             ....+...+....
T Consensus       212 ~~~~~~~~~---------------------------------------~~~~~i-------------~~~~~~~~~~~~~  239 (283)
T d1mqba_         212 RPYWELSNH---------------------------------------EVMKAI-------------NDGFRLPTPMDCP  239 (283)
T ss_dssp             CTTTTCCHH---------------------------------------HHHHHH-------------HTTCCCCCCTTCB
T ss_pred             CccccCCHH---------------------------------------HHHHHH-------------hccCCCCCchhhH
Confidence            55322 111                                       111111             1111122222334


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccC
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETT  195 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~  195 (231)
                      ..+.+|+.+||+.||++||||.||++.|+....
T Consensus       240 ~~l~~li~~cl~~~p~~RPt~~eil~~L~~l~~  272 (283)
T d1mqba_         240 SAIYQLMMQCWQQERARRPKFADIVSILDKLIR  272 (283)
T ss_dssp             HHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHCcCCHhHCcCHHHHHHHHHHHhh
Confidence            567889999999999999999999999986543

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=2.6e-29  Score=204.63  Aligned_cols=174  Identities=18%  Similarity=0.125  Sum_probs=103.9

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+|||++.++.+||+|||+++......   ..+.+||..|+|||++.+..++.++||||+||+++||++|+.||
T Consensus       127 iHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~---~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf  203 (322)
T d1s9ja_         127 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM---ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI  203 (322)
T ss_dssp             CCSCCSGGGEEECTTCCEEECCCCCCHHHHHHT---C---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCS
T ss_pred             EccccCHHHeeECCCCCEEEeeCCCccccCCCc---cccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCC
Confidence            499999999999999999999999998654321   24568999999999999989999999999999999999999999


Q ss_pred             ccchhhhhhhhccc---cCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           86 NRYKAQKLRTQFVV---PHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        86 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      ..............   .................   .......................      ..+.+...   ...
T Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~---~~s  271 (322)
T d1s9ja_         204 PPPDAKELELMFGCQVEGDAAETPPRPRTPGRPL---SSYGMDSRPPMAIFELLDYIVNE------PPPKLPSG---VFS  271 (322)
T ss_dssp             SCCCTTHHHHHC---------------------------------CCCCHHHHHHHHHTS------CCCCCCBT---TBC
T ss_pred             CCCCHHHHHHHHHHHhcCCcccCCcccccccccc---cccccccccchhHHHHHhhhhcc------CCccCccc---cCC
Confidence            76543221111110   00000000000000000   00000000001111111111100      01111111   112


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      ..+.+|+.+||+.||++|||+.|+++|+++..
T Consensus       272 ~~~~dli~~~L~~dP~~R~ta~e~L~Hpf~~~  303 (322)
T d1s9ja_         272 LEFQDFVNKCLIKNPAERADLKQLMVHAFIKR  303 (322)
T ss_dssp             HHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHH
T ss_pred             HHHHHHHHHHcCCChhHCcCHHHHhhCHhhCc
Confidence            45678999999999999999999999999854

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=7.7e-30  Score=202.14  Aligned_cols=136  Identities=17%  Similarity=0.118  Sum_probs=90.8

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhC-CCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATG-RKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g-~~p   84 (231)
                      .||||||+|||++.++.+||+|||+++..............|+..|+|||++.+..++.++|||||||++||++++ .+|
T Consensus       123 iHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~  202 (263)
T d1sm2a_         123 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIP  202 (263)
T ss_dssp             CCTTCSGGGEEECGGGCEEECSCC------------------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCT
T ss_pred             eecccchhheeecCCCCeEecccchheeccCCCceeecceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCC
Confidence            6999999999999999999999999987654333333446789999999999988899999999999999999995 555


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |......                                       .+...+..             ..+...+..+...
T Consensus       203 ~~~~~~~---------------------------------------~~~~~i~~-------------~~~~~~p~~~~~~  230 (263)
T d1sm2a_         203 YENRSNS---------------------------------------EVVEDIST-------------GFRLYKPRLASTH  230 (263)
T ss_dssp             TCSCCHH---------------------------------------HHHHHHHH-------------TCCCCCCTTSCHH
T ss_pred             CCCCCHH---------------------------------------HHHHHHHh-------------cCCCCCccccCHH
Confidence            5433221                                       11111110             0111111122345


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhcc
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNFE  193 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~~  193 (231)
                      +.+++.+||+.||++||||+||+++|+..
T Consensus       231 l~~li~~cl~~~p~~Rps~~~il~~L~~i  259 (263)
T d1sm2a_         231 VYQIMNHCWKERPEDRPAFSRLLRQLAEI  259 (263)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHccCCHhHCcCHHHHHHHHHHH
Confidence            78899999999999999999999999853

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=5.2e-30  Score=203.69  Aligned_cols=133  Identities=23%  Similarity=0.290  Sum_probs=93.8

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+|||++.++.+||+|||+++.+.... .......||+.|+|||++.+..++.++||||+||++|+|++|+.||
T Consensus       136 iHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~-~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf  214 (269)
T d2java1         136 LHRDLKPANVFLDGKQNVKLGDFGLARILNHDT-SFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPF  214 (269)
T ss_dssp             ----CCGGGEEECTTSCEEECCHHHHHHC------------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSC
T ss_pred             EeCcCchhhcCcCCCCcEEEeeccceeecccCC-CccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCC
Confidence            599999999999999999999999998765322 2234568999999999998888999999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      ......+....+..                                           ...     +.+...+    ...+
T Consensus       215 ~~~~~~~~~~~i~~-------------------------------------------~~~-----~~~~~~~----s~~l  242 (269)
T d2java1         215 TAFSQKELAGKIRE-------------------------------------------GKF-----RRIPYRY----SDEL  242 (269)
T ss_dssp             CCSSHHHHHHHHHH-------------------------------------------TCC-----CCCCTTS----CHHH
T ss_pred             CCCCHHHHHHHHHc-------------------------------------------CCC-----CCCCccc----CHHH
Confidence            76543211111110                                           000     0111111    2356


Q ss_pred             HHHHHhhcCCCCCCCCCHHHHHHHHh
Q 045790          166 LIVGLWCAHPDRCFRPSIRQAIQVLN  191 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps~~ell~~l~  191 (231)
                      .+|+.+||+.||++|||+.||++|++
T Consensus       243 ~~li~~~L~~dp~~Rps~~ell~hp~  268 (269)
T d2java1         243 NEIITRMLNLKDYHRPSVEEILENPL  268 (269)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHTSTT
T ss_pred             HHHHHHHcCCChhHCcCHHHHHhCCc
Confidence            78899999999999999999999976

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=3.1e-29  Score=201.34  Aligned_cols=140  Identities=19%  Similarity=0.174  Sum_probs=105.0

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+|||++.++.+||+|||+++.+.... ......+||+.|+|||++.+..++.++||||+||++|+|++|..||
T Consensus       138 iHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf  216 (293)
T d1yhwa1         138 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ-SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY  216 (293)
T ss_dssp             ECCCCSGGGEEECTTCCEEECCCTTCEECCSTT-CCBCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTT
T ss_pred             cccCCcHHHeEECCCCcEeeccchhheeecccc-ccccccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCC
Confidence            499999999999999999999999998765332 2234567999999999998888999999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      ...........                                          ......      +.+  ..+......+
T Consensus       217 ~~~~~~~~~~~------------------------------------------~~~~~~------~~~--~~~~~~s~~~  246 (293)
T d1yhwa1         217 LNENPLRALYL------------------------------------------IATNGT------PEL--QNPEKLSAIF  246 (293)
T ss_dssp             TTSCHHHHHHH------------------------------------------HHHHCS------CCC--SSGGGSCHHH
T ss_pred             CCCCHHHHHHH------------------------------------------HHhCCC------CCC--CCcccCCHHH
Confidence            75432211111                                          100000      000  0111122456


Q ss_pred             HHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          166 LIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                      .+|+.+||+.||++|||+.|+++|+++....
T Consensus       247 ~~li~~~L~~dP~~R~s~~eil~Hp~~~~~~  277 (293)
T d1yhwa1         247 RDFLNRCLDMDVEKRGSAKELLQHQFLKIAK  277 (293)
T ss_dssp             HHHHHHHTCSSTTTSCCHHHHTTCGGGGGCC
T ss_pred             HHHHHHHccCChhHCcCHHHHhcCHhhCCCC
Confidence            7899999999999999999999999986533

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.2e-29  Score=201.73  Aligned_cols=141  Identities=19%  Similarity=0.161  Sum_probs=101.8

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCC-CceeEeeccccccchhhhhhCCC-CCCcccHhHHHHHHHHHhCCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELG-PKTIMLVGTLAYMASEYISTGRV-SKELDVFSFRVVALEIATGRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~s~G~vl~el~~g~~   83 (231)
                      .||||||+|||++.++.+||+|||+++....+.. ......+||+.|+|||++.+..+ +.++||||+||++|+|++|+.
T Consensus       125 iHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~  204 (271)
T d1nvra_         125 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL  204 (271)
T ss_dssp             ECSCCCGGGEEECTTCCEEECCCTTCEECEETTEECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSC
T ss_pred             ccCcccHHHEEECCCCCEEEccchhheeeccCCccccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCC
Confidence            4999999999999999999999999987643221 22345689999999999987775 577999999999999999999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||......                                     .    .............   .+      ......
T Consensus       205 pf~~~~~~-------------------------------------~----~~~~~~~~~~~~~---~~------~~~~s~  234 (271)
T d1nvra_         205 PWDQPSDS-------------------------------------C----QEYSDWKEKKTYL---NP------WKKIDS  234 (271)
T ss_dssp             SCSSSSTT-------------------------------------S----HHHHHHHTTCTTS---TT------GGGSCH
T ss_pred             CCCCCChH-------------------------------------H----HHHHHHhcCCCCC---Cc------cccCCH
Confidence            99643311                                     0    0000000000000   00      001123


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                      .+.+|+.+||+.||++|||+.|+++|+|+...+
T Consensus       235 ~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~l  267 (271)
T d1nvra_         235 APLALLHKILVENPSARITIPDIKKDRWYNKPL  267 (271)
T ss_dssp             HHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCC
T ss_pred             HHHHHHHHHcCCChhHCcCHHHHhcCHhhCcCC
Confidence            456789999999999999999999999987544

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.5e-29  Score=203.92  Aligned_cols=136  Identities=21%  Similarity=0.118  Sum_probs=94.8

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCC-ceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCC-C
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGP-KTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGR-K   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~-~   83 (231)
                      .||||||+|||++.++.+||+|||+++........ ......||+.|+|||++.+..++.++||||+||++|||+++. .
T Consensus       156 vHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~  235 (299)
T d1ywna1         156 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS  235 (299)
T ss_dssp             CCSCCCGGGEEECGGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred             cCCcCCccceeECCCCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCC
Confidence            59999999999999999999999999865433222 233457899999999999999999999999999999999864 5


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||......                                          ..+.......         .....+.....
T Consensus       236 p~~~~~~~------------------------------------------~~~~~~~~~~---------~~~~~~~~~~~  264 (299)
T d1ywna1         236 PYPGVKID------------------------------------------EEFCRRLKEG---------TRMRAPDYTTP  264 (299)
T ss_dssp             SSTTCCCS------------------------------------------HHHHHHHHHT---------CCCCCCTTCCH
T ss_pred             CCCCCCHH------------------------------------------HHHHHHHhcC---------CCCCCCccCCH
Confidence            67543211                                          0111111111         11111122234


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      .+.+++.+||+.||++|||+.||++||+.
T Consensus       265 ~l~~li~~cl~~dP~~Rpt~~eil~~L~~  293 (299)
T d1ywna1         265 EMYQTMLDCWHGEPSQRPTFSELVEHLGN  293 (299)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence            57889999999999999999999999975

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.9e-29  Score=201.14  Aligned_cols=142  Identities=22%  Similarity=0.259  Sum_probs=98.1

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCC-CceeEeeccccccchhhhhh---CCCCCCcccHhHHHHHHHHHhC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELG-PKTIMLVGTLAYMASEYIST---GRVSKELDVFSFRVVALEIATG   81 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~---~~~~~~~Dv~s~G~vl~el~~g   81 (231)
                      .||||||+|||++.++.+||+|||+++....... .......||+.|+|||++.+   ..++.++|||||||++|||++|
T Consensus       126 vHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg  205 (276)
T d1uwha_         126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG  205 (276)
T ss_dssp             CCSCCCGGGEEEETTSSEEECCCCCSCC------------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHS
T ss_pred             eccccCHHHEEEcCCCCEEEccccceeeccccCCcccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHC
Confidence            5999999999999999999999999977643222 22345678999999999864   3478899999999999999999


Q ss_pred             CCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHH
Q 045790           82 RKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQ  161 (231)
Q Consensus        82 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  161 (231)
                      +.||.......                                      .+...+..    .    ...+.+ .......
T Consensus       206 ~~Pf~~~~~~~--------------------------------------~~~~~~~~----~----~~~p~~-~~~~~~~  238 (276)
T d1uwha_         206 QLPYSNINNRD--------------------------------------QIIFMVGR----G----YLSPDL-SKVRSNC  238 (276)
T ss_dssp             SCTTTTCCCHH--------------------------------------HHHHHHHH----T----SCCCCG-GGSCTTC
T ss_pred             CCCCCCCChHH--------------------------------------HHHHHHhc----C----CCCCcc-hhccccc
Confidence            99997533110                                      11111111    0    000111 0111122


Q ss_pred             HHHHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          162 MTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       162 ~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      ...+.+++.+||+.||++||||.||+++|+...
T Consensus       239 ~~~l~~li~~cl~~dp~~RPt~~~il~~Le~l~  271 (276)
T d1uwha_         239 PKAMKRLMAECLKKKRDERPLFPQILASIELLA  271 (276)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence            346788999999999999999999999998754

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.95  E-value=5.1e-29  Score=200.80  Aligned_cols=136  Identities=20%  Similarity=0.233  Sum_probs=92.6

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCc----eeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPK----TIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-   80 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~----~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-   80 (231)
                      .||||||+|||++.++.+||+|||+++.+.......    .....|++.|+|||.+....++.++|||||||++|||++ 
T Consensus       150 iHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~  229 (299)
T d1jpaa_         150 VHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSY  229 (299)
T ss_dssp             CCSCCCGGGEEECTTCCEEECCC-----------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTT
T ss_pred             ccCccccceEEECCCCcEEECCcccceEccCCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhC
Confidence            599999999999999999999999998765332211    122457889999999988889999999999999999998 


Q ss_pred             CCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHH
Q 045790           81 GRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQ  160 (231)
Q Consensus        81 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  160 (231)
                      |..||......++...+.                                                    ...+...+..
T Consensus       230 g~~Pf~~~~~~~~~~~i~----------------------------------------------------~~~~~~~~~~  257 (299)
T d1jpaa_         230 GERPYWDMTNQDVINAIE----------------------------------------------------QDYRLPPPMD  257 (299)
T ss_dssp             SCCTTTTCCHHHHHHHHH----------------------------------------------------TTCCCCCCTT
T ss_pred             CCCCCCCCCHHHHHHHHH----------------------------------------------------cCCCCCCCcc
Confidence            899997544321111111                                                    0111111222


Q ss_pred             HHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcc
Q 045790          161 QMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFE  193 (231)
Q Consensus       161 ~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~  193 (231)
                      ....+.+|+.+||+.||++||||.||+++|+..
T Consensus       258 ~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~~  290 (299)
T d1jpaa_         258 CPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKM  290 (299)
T ss_dssp             CCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence            335577899999999999999999999998754

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=2e-29  Score=200.71  Aligned_cols=135  Identities=20%  Similarity=0.174  Sum_probs=98.5

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+|||++.++.+||+|||+++..............|+..|+|||++....++.++|||||||++|||++|..|+
T Consensus       131 vHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~  210 (272)
T d1qpca_         131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP  210 (272)
T ss_dssp             ECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCS
T ss_pred             ccCccchhheeeecccceeeccccceEEccCCccccccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCC
Confidence            59999999999999999999999999887543322233456788999999998888999999999999999999965544


Q ss_pred             -ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           86 -NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        86 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                       ......+                                       +..   .+..          ..+...+......
T Consensus       211 ~~~~~~~~---------------------------------------~~~---~i~~----------~~~~~~p~~~~~~  238 (272)
T d1qpca_         211 YPGMTNPE---------------------------------------VIQ---NLER----------GYRMVRPDNCPEE  238 (272)
T ss_dssp             STTCCHHH---------------------------------------HHH---HHHT----------TCCCCCCTTCCHH
T ss_pred             CCCCCHHH---------------------------------------HHH---HHHh----------cCCCCCcccChHH
Confidence             3222111                                       111   1110          0111111122345


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      +.+|+.+||+.||++||||.+|++.|+.
T Consensus       239 l~~li~~cl~~~P~~Rpt~~ei~~~L~~  266 (272)
T d1qpca_         239 LYQLMRLCWKERPEDRPTFDYLRSVLED  266 (272)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHHHHcCCCHhHCcCHHHHHHHhhh
Confidence            7789999999999999999999998763

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.95  E-value=3.4e-29  Score=200.77  Aligned_cols=136  Identities=20%  Similarity=0.121  Sum_probs=101.1

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+|||++.++.+||+|||+++..............|+..|+|||++.+..++.++|||||||++|||++|..|+
T Consensus       137 iHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~  216 (287)
T d1opja_         137 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP  216 (287)
T ss_dssp             CCSCCSGGGEEECGGGCEEECCCCCTTTCCSSSSEEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCS
T ss_pred             ccCccccCeEEECCCCcEEEccccceeecCCCCceeeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCC
Confidence            59999999999999999999999999876544333333346788999999999999999999999999999999976665


Q ss_pred             ccc-hhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           86 NRY-KAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        86 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      ... ...                                       .+...+             ........+......
T Consensus       217 ~~~~~~~---------------------------------------~~~~~i-------------~~~~~~~~~~~~~~~  244 (287)
T d1opja_         217 YPGIDLS---------------------------------------QVYELL-------------EKDYRMERPEGCPEK  244 (287)
T ss_dssp             STTCCHH---------------------------------------HHHHHH-------------HTTCCCCCCTTCCHH
T ss_pred             CCcchHH---------------------------------------HHHHHH-------------hcCCCCCCCccchHH
Confidence            422 111                                       111111             111111222223356


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhcc
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNFE  193 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~~  193 (231)
                      +.+|+.+||+.||++||||.||++.|+..
T Consensus       245 l~~li~~cl~~dP~~Rps~~ei~~~L~~~  273 (287)
T d1opja_         245 VYELMRACWQWNPSDRPSFAEIHQAFETM  273 (287)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHHHHT
T ss_pred             HHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence            78899999999999999999999988653

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=6.5e-29  Score=197.36  Aligned_cols=134  Identities=20%  Similarity=0.221  Sum_probs=98.3

Q ss_pred             eecCCCCCCeeeC-CCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCc
Q 045790            6 YSRSPELPPGRGD-FNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~-~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      .||||||+|||++ .++.+||+|||+++....   ......+||+.|+|||++.+ .++.++||||+||++|+|++|+.|
T Consensus       136 iHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~---~~~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~P  211 (270)
T d1t4ha_         136 IHRDLKCDNIFITGPTGSVKIGDLGLATLKRA---SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYP  211 (270)
T ss_dssp             CCSCCCGGGEEESSTTSCEEECCTTGGGGCCT---TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCT
T ss_pred             EeCCcChhhceeeCCCCCEEEeecCcceeccC---CccCCcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCC
Confidence            6999999999997 578999999999986432   22356789999999999854 699999999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |......                                         ............     .+.+..    .....
T Consensus       212 f~~~~~~-----------------------------------------~~~~~~i~~~~~-----~~~~~~----~~~~~  241 (270)
T d1t4ha_         212 YSECQNA-----------------------------------------AQIYRRVTSGVK-----PASFDK----VAIPE  241 (270)
T ss_dssp             TTTCSSH-----------------------------------------HHHHHHHTTTCC-----CGGGGG----CCCHH
T ss_pred             CCCcccH-----------------------------------------HHHHHHHHcCCC-----CcccCc----cCCHH
Confidence            9643211                                         011111110000     001111    11234


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhcc
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNFE  193 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~~  193 (231)
                      +.+++.+||+.||++|||+.|+++|+++.
T Consensus       242 ~~~li~~~l~~dp~~R~s~~ell~Hp~fk  270 (270)
T d1t4ha_         242 VKEIIEGCIRQNKDERYSIKDLLNHAFFQ  270 (270)
T ss_dssp             HHHHHHHHSCSSGGGSCCHHHHHTSGGGC
T ss_pred             HHHHHHHHccCCHhHCcCHHHHhCCcccC
Confidence            67889999999999999999999999873

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.1e-28  Score=198.97  Aligned_cols=165  Identities=16%  Similarity=0.012  Sum_probs=108.8

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhC-CCCCCcccHhHHHHHHHHHhCCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTG-RVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      .||||||+|||++.++.+||+|||+++....... .....+||+.|+|||++... .++.++||||+||++++|++|..|
T Consensus       122 iHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~p  200 (299)
T d1ua2a_         122 LHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNR-AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPF  200 (299)
T ss_dssp             CCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCC-CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCS
T ss_pred             ecccCCcceEEecCCCccccccCccccccCCCcc-cccceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCC
Confidence            5999999999999999999999999977654322 22345789999999998755 478999999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |......+.+..+...........+..............   .....+             .. ..+    .    ....
T Consensus       201 f~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------~~-~~~----~----~s~~  255 (299)
T d1ua2a_         201 LPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKS---FPGIPL-------------HH-IFS----A----AGDD  255 (299)
T ss_dssp             SCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCC---CCCCCH-------------HH-HCT----T----CCHH
T ss_pred             CCCCCHHHHHHHHHHhcCCCChhhccchhccchhhhhcc---CCCCCh-------------HH-hcc----c----CCHH
Confidence            987766555554443211111110000000000000000   000000             00 000    0    1235


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                      +.+|+.+||+.||++|||+.|+++|+++....
T Consensus       256 ~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~p  287 (299)
T d1ua2a_         256 LLDLIQGLFLFNPCARITATQALKMKYFSNRP  287 (299)
T ss_dssp             HHHHHHHHHCSSTTTSCCHHHHHTSGGGTSSS
T ss_pred             HHHHHHHHccCChhhCcCHHHHhCCHhhCCCC
Confidence            68899999999999999999999999996543

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.1e-28  Score=200.58  Aligned_cols=136  Identities=21%  Similarity=0.146  Sum_probs=100.5

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCc-eeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPK-TIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~   83 (231)
                      .||||||+|||++.++.+||+|||+++......... .....||..|+|||++.+..++.++|||||||++|||++ |..
T Consensus       133 iHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~  212 (317)
T d1xkka_         133 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK  212 (317)
T ss_dssp             CCSCCCGGGEEEEETTEEEECCCSHHHHTTTTCC--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred             ccCcchhhcceeCCCCCeEeeccccceecccccccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCC
Confidence            599999999999999999999999998765433222 334568999999999999999999999999999999998 788


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||......                                       .+...+.             ...+...+.....
T Consensus       213 p~~~~~~~---------------------------------------~~~~~i~-------------~~~~~~~p~~~~~  240 (317)
T d1xkka_         213 PYDGIPAS---------------------------------------EISSILE-------------KGERLPQPPICTI  240 (317)
T ss_dssp             TTTTSCGG---------------------------------------GHHHHHH-------------HTCCCCCCTTBCH
T ss_pred             CCCCCCHH---------------------------------------HHHHHHH-------------cCCCCCCCcccCH
Confidence            88654321                                       1111111             1111112222335


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhcc
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNFE  193 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~~  193 (231)
                      .+.+++.+||+.||++|||+.||+++|...
T Consensus       241 ~~~~li~~cl~~dP~~RPs~~eil~~l~~~  270 (317)
T d1xkka_         241 DVYMIMVKCWMIDADSRPKFRELIIEFSKM  270 (317)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHhCCCChhhCcCHHHHHHHHHHH
Confidence            678899999999999999999999998764

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.94  E-value=1.4e-28  Score=198.98  Aligned_cols=135  Identities=21%  Similarity=0.157  Sum_probs=100.9

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhh---CCCCCCcccHhHHHHHHHHHhCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIST---GRVSKELDVFSFRVVALEIATGR   82 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~---~~~~~~~Dv~s~G~vl~el~~g~   82 (231)
                      .||||||+|||++.++.+||+|||++......     ....||+.|+|||++.+   ..++.++||||+||++|+|++|.
T Consensus       137 iHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~~-----~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~  211 (309)
T d1u5ra_         137 IHRDVKAGNILLSEPGLVKLGDFGSASIMAPA-----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERK  211 (309)
T ss_dssp             BCCCCSGGGEEEETTTEEEECCCTTCBSSSSB-----CCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSS
T ss_pred             eccCCCcceEEECCCCCEEEeecccccccCCC-----CccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCC
Confidence            49999999999999999999999999865432     34579999999999864   45889999999999999999999


Q ss_pred             CccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           83 KVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        83 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      .||...........+                                          ....      .+.+..   ....
T Consensus       212 ~Pf~~~~~~~~~~~i------------------------------------------~~~~------~~~~~~---~~~s  240 (309)
T d1u5ra_         212 PPLFNMNAMSALYHI------------------------------------------AQNE------SPALQS---GHWS  240 (309)
T ss_dssp             CTTTTSCHHHHHHHH------------------------------------------HHSC------CCCCSC---TTSC
T ss_pred             CCCCCCCHHHHHHHH------------------------------------------HhCC------CCCCCC---CCCC
Confidence            999754322111111                                          1000      011100   1112


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                      ..+.+|+.+||+.||++|||+.|+++|+++....
T Consensus       241 ~~~~~li~~~L~~dP~~Rpt~~ell~Hp~~~~~~  274 (309)
T d1u5ra_         241 EYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRER  274 (309)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHSCC
T ss_pred             HHHHHHHHHHCcCChhHCcCHHHHHhCHHhcCCC
Confidence            3567889999999999999999999999986543

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=3e-28  Score=192.26  Aligned_cols=135  Identities=16%  Similarity=0.159  Sum_probs=103.3

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~p   84 (231)
                      .||||||+||+++.++.+||+|||+++..............|+..|+|||.+....++.++||||||+++|||++ |+.|
T Consensus       122 iH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~P  201 (258)
T d1k2pa_         122 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP  201 (258)
T ss_dssp             CCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSCCCCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCT
T ss_pred             ccccccceeEEEcCCCcEEECcchhheeccCCCceeecccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCC
Confidence            599999999999999999999999998765443333344568889999999999999999999999999999998 7999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |......+....+.                                          .          ..+...+......
T Consensus       202 f~~~~~~~~~~~i~------------------------------------------~----------~~~~~~p~~~~~~  229 (258)
T d1k2pa_         202 YERFTNSETAEHIA------------------------------------------Q----------GLRLYRPHLASEK  229 (258)
T ss_dssp             TTTSCHHHHHHHHH------------------------------------------T----------TCCCCCCTTCCHH
T ss_pred             CCCCCHHHHHHHHH------------------------------------------h----------CCCCCCcccccHH
Confidence            97654332111111                                          0          0001111122246


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      +.+|+.+||+.||++|||+.+|++||..
T Consensus       230 l~~li~~cl~~dP~~RPt~~eil~~L~d  257 (258)
T d1k2pa_         230 VYTIMYSCWHEKADERPTFKILLSNILD  257 (258)
T ss_dssp             HHHHHHHTTCSSGGGSCCHHHHHHHHHC
T ss_pred             HHHHHHHHccCCHhHCcCHHHHHHHhhC
Confidence            7889999999999999999999999854

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.5e-28  Score=195.93  Aligned_cols=134  Identities=19%  Similarity=0.114  Sum_probs=98.6

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCc--eeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPK--TIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GR   82 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~   82 (231)
                      .||||||+|||++.++.+||+|||+++.........  .....|++.|+|||.+.+..++.++|||||||++||+++ |.
T Consensus       129 iHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~  208 (277)
T d1xbba_         129 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQ  208 (277)
T ss_dssp             ECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTC
T ss_pred             ccCCCcchhhcccccCcccccchhhhhhccccccccccccccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCC
Confidence            599999999999999999999999998765332221  233568889999999998889999999999999999997 89


Q ss_pred             CccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           83 KVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        83 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      .||......+..                                       ..+.             ...+...+....
T Consensus       209 ~Pf~~~~~~~~~---------------------------------------~~i~-------------~~~~~~~p~~~~  236 (277)
T d1xbba_         209 KPYRGMKGSEVT---------------------------------------AMLE-------------KGERMGCPAGCP  236 (277)
T ss_dssp             CSSTTCCHHHHH---------------------------------------HHHH-------------TTCCCCCCTTCC
T ss_pred             CCCCCCCHHHHH---------------------------------------HHHH-------------cCCCCCCCcccC
Confidence            999754432111                                       1110             001111112223


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHh
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLN  191 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~  191 (231)
                      ..+.+|+.+||+.||++|||+.+|++.|+
T Consensus       237 ~~~~~li~~cl~~dp~~RPs~~~i~~~L~  265 (277)
T d1xbba_         237 REMYDLMNLCWTYDVENRPGFAAVELRLR  265 (277)
T ss_dssp             HHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCHhHCcCHHHHHHHhh
Confidence            45678999999999999999999977664

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=2.7e-28  Score=195.17  Aligned_cols=136  Identities=20%  Similarity=0.144  Sum_probs=94.6

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+|||++.++.+||+|||+++..............|++.|+|||++....++.++|||||||++|||++|..|+
T Consensus       135 vH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~  214 (285)
T d1fmka3         135 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP  214 (285)
T ss_dssp             CCSCCSGGGEEECGGGCEEECCCCTTC--------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCS
T ss_pred             ecccccceEEEECCCCcEEEcccchhhhccCCCceeeccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCC
Confidence            59999999999999999999999999876543333334467899999999999999999999999999999999976555


Q ss_pred             cc-chhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           86 NR-YKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        86 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      .. ....                                       .+...+   .          .......+......
T Consensus       215 ~~~~~~~---------------------------------------~~~~~i---~----------~~~~~~~~~~~~~~  242 (285)
T d1fmka3         215 YPGMVNR---------------------------------------EVLDQV---E----------RGYRMPCPPECPES  242 (285)
T ss_dssp             STTCCHH---------------------------------------HHHHHH---H----------TTCCCCCCTTSCHH
T ss_pred             CCCCCHH---------------------------------------HHHHHH---H----------hcCCCCCCcccCHH
Confidence            32 2211                                       111111   1          01111122233346


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhcc
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNFE  193 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~~  193 (231)
                      +.+++.+||+.||++||||.+|++.|+..
T Consensus       243 l~~li~~cl~~dP~~Rps~~~i~~~L~~~  271 (285)
T d1fmka3         243 LHDLMCQCWRKEPEERPTFEYLQAFLEDY  271 (285)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHHHTT
T ss_pred             HHHHHHHHcccCHhHCcCHHHHHHHHhhh
Confidence            78899999999999999999999988753

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.4e-28  Score=197.07  Aligned_cols=136  Identities=13%  Similarity=0.122  Sum_probs=99.3

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCC-CceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELG-PKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      .||||||+|||++.++.+||+|||+++.+..... ......+||+.|+|||++.+..++.++||||+||++|+|++|..|
T Consensus       130 iHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~P  209 (288)
T d1uu3a_         130 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP  209 (288)
T ss_dssp             ECSCCSGGGEEECTTSCEEECCCTTCEECC----------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCS
T ss_pred             EcCcCCccccccCCCceEEecccccceecccCCcccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCC
Confidence            5999999999999999999999999987653222 223456799999999999988899999999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |...........+....                                                 ..+..    .....
T Consensus       210 f~~~~~~~~~~~i~~~~-------------------------------------------------~~~p~----~~s~~  236 (288)
T d1uu3a_         210 FRAGNEYLIFQKIIKLE-------------------------------------------------YDFPE----KFFPK  236 (288)
T ss_dssp             SCCSSHHHHHHHHHTTC-------------------------------------------------CCCCT----TCCHH
T ss_pred             CCCcCHHHHHHHHHcCC-------------------------------------------------CCCCc----cCCHH
Confidence            97654332222211100                                                 01111    11234


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHH------HHHHhccc
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQA------IQVLNFET  194 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~el------l~~l~~~~  194 (231)
                      +.+|+.+||+.||++|||+.|+      ++|++|..
T Consensus       237 ~~~li~~~L~~dP~~R~t~~e~~~~~~i~~Hpff~~  272 (288)
T d1uu3a_         237 ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFES  272 (288)
T ss_dssp             HHHHHHTTSCSSGGGSTTSGGGTCHHHHHTSGGGTT
T ss_pred             HHHHHHHHccCCHhHCcCHHHHcCCHHHHcCCccCC
Confidence            6789999999999999999985      66766644

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.8e-28  Score=195.21  Aligned_cols=135  Identities=24%  Similarity=0.187  Sum_probs=91.3

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~p   84 (231)
                      .||||||+||+++.++.+||+|||+++.+............|++.|+|||++.+..++.++|||||||++|||++ |..|
T Consensus       130 iHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~~~~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P  209 (273)
T d1mp8a_         130 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP  209 (273)
T ss_dssp             CCSCCSGGGEEEEETTEEEECC-------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCT
T ss_pred             eccccchhheeecCCCcEEEccchhheeccCCcceeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCC
Confidence            599999999999999999999999998765443333445678899999999999999999999999999999987 8899


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |......+....+..                                          ...      +    ..+......
T Consensus       210 ~~~~~~~~~~~~i~~------------------------------------------~~~------~----~~~~~~~~~  237 (273)
T d1mp8a_         210 FQGVKNNDVIGRIEN------------------------------------------GER------L----PMPPNCPPT  237 (273)
T ss_dssp             TTTCCGGGHHHHHHT------------------------------------------TCC------C----CCCTTCCHH
T ss_pred             CCCCCHHHHHHHHHc------------------------------------------CCC------C----CCCCCCCHH
Confidence            875443211111110                                          000      0    111122345


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      +.+|+.+||+.||++|||+.||+++|..
T Consensus       238 ~~~li~~cl~~dp~~Rps~~ei~~~L~~  265 (273)
T d1mp8a_         238 LYSLMTKCWAYDPSRRPRFTELKAQLST  265 (273)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence            7789999999999999999999999875

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=3.2e-28  Score=196.57  Aligned_cols=161  Identities=17%  Similarity=0.073  Sum_probs=108.5

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+|||++.++.+||+|||+++.....  .......||+.|+|||++.+..++.++||||+||++++|++|+.||
T Consensus       138 vHrDiKp~NILi~~~~~~kl~dfg~~~~~~~~--~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf  215 (305)
T d1blxa_         138 VHRDLKPQNILVTSSGQIKLADFGLARIYSFQ--MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLF  215 (305)
T ss_dssp             CCCCCCGGGEEECTTCCEEECSCCSCCCCCGG--GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred             EecCCCccEEEEcCCCCeeecchhhhhhhccc--ccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCC
Confidence            59999999999999999999999998765322  2234568999999999999999999999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      ......+....+...........+...............                  ...    .+.+....    ...+
T Consensus       216 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~----~~~~~~~~----s~~~  269 (305)
T d1blxa_         216 RGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKS------------------AQP----IEKFVTDI----DELG  269 (305)
T ss_dssp             CCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCC------------------CCC----GGGTCCSC----CHHH
T ss_pred             CCCCHHHHHHHHHHhhCCCchhcccccccchhhhhcccc------------------ccc----hhhccccC----CHHH
Confidence            877655444444321111111100000000000000000                  000    00111111    2345


Q ss_pred             HHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          166 LIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      .+|+.+||+.||++|||+.|+++|+++..
T Consensus       270 ~dli~~mL~~dP~~R~sa~e~L~Hpff~~  298 (305)
T d1blxa_         270 KDLLLKCLTFNPAKRISAYSALSHPYFQD  298 (305)
T ss_dssp             HHHHHHHSCSSTTTSCCHHHHHTSGGGTT
T ss_pred             HHHHHHHCcCChhHCcCHHHHhcChhhcC
Confidence            67899999999999999999999999853

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1e-28  Score=197.99  Aligned_cols=138  Identities=15%  Similarity=0.090  Sum_probs=100.5

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhh-----hCCCCCCcccHhHHHHHHHHHh
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIS-----TGRVSKELDVFSFRVVALEIAT   80 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~Dv~s~G~vl~el~~   80 (231)
                      .||||||+|||++.++.+||+|||+++..... ........||+.|+|||++.     ...++.++||||+||++|+|++
T Consensus       132 vHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~-~~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemlt  210 (288)
T d2jfla1         132 IHRDLKAGNILFTLDGDIKLADFGVSAKNTRT-IQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAE  210 (288)
T ss_dssp             ECCCCSGGGEEECTTSCEEECCCTTCEECHHH-HHHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHH
T ss_pred             EEeecChhheeECCCCCEEEEechhhhccCCC-cccccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhh
Confidence            59999999999999999999999998764321 11123467899999999984     3457889999999999999999


Q ss_pred             CCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHH
Q 045790           81 GRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQ  160 (231)
Q Consensus        81 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  160 (231)
                      |+.||......+....+...                                          ..      +.+  ..+..
T Consensus       211 g~~Pf~~~~~~~~~~~i~~~------------------------------------------~~------~~~--~~~~~  240 (288)
T d2jfla1         211 IEPPHHELNPMRVLLKIAKS------------------------------------------EP------PTL--AQPSR  240 (288)
T ss_dssp             SSCTTTTSCGGGHHHHHHHS------------------------------------------CC------CCC--SSGGG
T ss_pred             CCCCCCCCCHHHHHHHHHcC------------------------------------------CC------CCC--Ccccc
Confidence            99999754432111111110                                          00      000  01111


Q ss_pred             HHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          161 QMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       161 ~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      ....+.+|+.+||+.||++|||+.|+++|+++..
T Consensus       241 ~s~~~~~li~~~L~~dp~~R~t~~ell~hp~~~~  274 (288)
T d2jfla1         241 WSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTV  274 (288)
T ss_dssp             SCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGCC
T ss_pred             CCHHHHHHHHHHccCChhHCcCHHHHhcCcccCC
Confidence            2245678899999999999999999999998864

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.4e-28  Score=196.79  Aligned_cols=135  Identities=19%  Similarity=0.133  Sum_probs=100.6

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCc--eeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPK--TIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GR   82 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~   82 (231)
                      .||||||+|||++.++.+||+|||+++.+.......  .....|++.|+|||++....++.++|||||||++||+++ |.
T Consensus       131 iHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~  210 (285)
T d1u59a_         131 VHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQ  210 (285)
T ss_dssp             ECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSC
T ss_pred             ecCcCchhheeeccCCceeeccchhhhcccccccccccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCC
Confidence            599999999999999999999999998775432211  223467889999999988889999999999999999998 89


Q ss_pred             CccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           83 KVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        83 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      .||......                                       .+...+.    .         ..+...+....
T Consensus       211 ~Pf~~~~~~---------------------------------------~~~~~i~----~---------~~~~~~p~~~~  238 (285)
T d1u59a_         211 KPYKKMKGP---------------------------------------EVMAFIE----Q---------GKRMECPPECP  238 (285)
T ss_dssp             CTTTTCCTH---------------------------------------HHHHHHH----T---------TCCCCCCTTCC
T ss_pred             CCCCCCCHH---------------------------------------HHHHHHH----c---------CCCCCCCCcCC
Confidence            999754322                                       1111110    0         00111112223


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      ..+.+|+.+||+.||++|||+.+|++.|+.
T Consensus       239 ~~l~~li~~cl~~~p~~RPs~~~i~~~L~~  268 (285)
T d1u59a_         239 PELYALMSDCWIYKWEDRPDFLTVEQRMRA  268 (285)
T ss_dssp             HHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence            456789999999999999999999877653

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.94  E-value=6.9e-28  Score=194.74  Aligned_cols=139  Identities=20%  Similarity=0.128  Sum_probs=92.4

Q ss_pred             eecCCCCCCeeeC---CCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCC
Q 045790            6 YSRSPELPPGRGD---FNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGR   82 (231)
Q Consensus         6 ~~rdlk~~nil~~---~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~   82 (231)
                      .||||||+||++.   .++.+||+|||+++.....  ......+||+.|+|||++.+..++.++||||+||++|+|++|.
T Consensus       129 iHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~--~~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~  206 (307)
T d1a06a_         129 VHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG--SVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGY  206 (307)
T ss_dssp             CCSCCCGGGEEESSSSTTCCEEECCC--------------------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred             eeEEecccceeecccCCCceEEEeccceeEEccCC--CeeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCC
Confidence            4999999999995   5788999999999875432  2234567999999999998888999999999999999999999


Q ss_pred             CccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           83 KVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        83 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      .||...........+.....                                                 ...........
T Consensus       207 ~Pf~~~~~~~~~~~i~~~~~-------------------------------------------------~~~~~~~~~~s  237 (307)
T d1a06a_         207 PPFYDENDAKLFEQILKAEY-------------------------------------------------EFDSPYWDDIS  237 (307)
T ss_dssp             CSCCCSSHHHHHHHHHTTCC-------------------------------------------------CCCTTTTTTSC
T ss_pred             CCCCCCCHHHHHHHHhccCC-------------------------------------------------CCCCccccCCC
Confidence            99976543322222211100                                                 00000001112


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccC
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETT  195 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~  195 (231)
                      ..+.+|+.+||+.||++|||+.|+++|+++...
T Consensus       238 ~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~  270 (307)
T d1a06a_         238 DSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGD  270 (307)
T ss_dssp             HHHHHHHHHHSCSSGGGSCCHHHHHHSTTTTSS
T ss_pred             HHHHHHHHHHccCCHhHCcCHHHHhcCHhhCCC
Confidence            346789999999999999999999999998654

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.94  E-value=3.1e-28  Score=200.22  Aligned_cols=143  Identities=13%  Similarity=0.013  Sum_probs=107.6

Q ss_pred             eecCCCCCCeeeC--CCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCC
Q 045790            6 YSRSPELPPGRGD--FNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~--~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~   83 (231)
                      .||||||+|||++  .++.+||+|||++......  .......|++.|+|||++.+..++.++||||+||++|+|++|..
T Consensus       149 iHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~  226 (352)
T d1koba_         149 VHLDIKPENIMCETKKASSVKIIDFGLATKLNPD--EIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLS  226 (352)
T ss_dssp             ECCCCCGGGEEESSTTCCCEEECCCTTCEECCTT--SCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCC
T ss_pred             eecccccccccccccCCCeEEEeecccceecCCC--CceeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCC
Confidence            5999999999998  5788999999999887542  33456789999999999988889999999999999999999999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||...........+.......                                             ......    ....
T Consensus       227 Pf~~~~~~~~~~~i~~~~~~~---------------------------------------------~~~~~~----~~s~  257 (352)
T d1koba_         227 PFAGEDDLETLQNVKRCDWEF---------------------------------------------DEDAFS----SVSP  257 (352)
T ss_dssp             SSCCSSHHHHHHHHHHCCCCC---------------------------------------------CSSTTT----TSCH
T ss_pred             CCCCCCHHHHHHHHHhCCCCC---------------------------------------------Cccccc----CCCH
Confidence            997655432222222111000                                             000001    1123


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCCCCC
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTMPNL  199 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~~~~  199 (231)
                      .+.+|+.+||+.||++|||+.|+++|+++.......
T Consensus       258 ~~~~li~~~L~~dp~~R~s~~eil~Hp~~~~~~~~~  293 (352)
T d1koba_         258 EAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDHSNL  293 (352)
T ss_dssp             HHHHHHHTTSCSSGGGSCCHHHHHTSTTTSSCCTTC
T ss_pred             HHHHHHHHHccCChhHCcCHHHHhcCHhhCCCcchh
Confidence            467899999999999999999999999987654433

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.94  E-value=3.3e-28  Score=196.28  Aligned_cols=137  Identities=19%  Similarity=0.074  Sum_probs=101.0

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCC-CceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCC-C
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELG-PKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGR-K   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~-~   83 (231)
                      .||||||+|||+|.++.+||+|||+++.+..... .......|+..|+|||.+.+..++.++|||||||++|||++|. .
T Consensus       162 vHrDlKp~NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~  241 (301)
T d1lufa_         162 VHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQ  241 (301)
T ss_dssp             CCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCC
T ss_pred             EeeEEcccceEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCC
Confidence            4999999999999999999999999986643222 2234567888999999999999999999999999999999985 5


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||......++..                                          .+.. ..         ....+.....
T Consensus       242 p~~~~~~~e~~~------------------------------------------~v~~-~~---------~~~~p~~~~~  269 (301)
T d1lufa_         242 PYYGMAHEEVIY------------------------------------------YVRD-GN---------ILACPENCPL  269 (301)
T ss_dssp             TTTTSCHHHHHH------------------------------------------HHHT-TC---------CCCCCTTCCH
T ss_pred             CCCCCCHHHHHH------------------------------------------HHHc-CC---------CCCCCccchH
Confidence            676544321111                                          1110 00         0111122234


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      .+..|+.+||+.||++||||.||++.|+...
T Consensus       270 ~~~~li~~cl~~~P~~RPt~~ev~~~L~~i~  300 (301)
T d1lufa_         270 ELYNLMRLCWSKLPADRPSFCSIHRILQRMC  300 (301)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             HHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence            6788999999999999999999999998654

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.94  E-value=1.9e-27  Score=195.34  Aligned_cols=139  Identities=16%  Similarity=0.018  Sum_probs=104.3

Q ss_pred             eecCCCCCCeeeC--CCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCC
Q 045790            6 YSRSPELPPGRGD--FNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~--~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~   83 (231)
                      .||||||+|||++  .++.+||+|||+++.+...  .......||+.|+|||++.+..++.++||||+||++|+|++|..
T Consensus       146 iHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~--~~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~  223 (350)
T d1koaa2         146 VHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK--QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLS  223 (350)
T ss_dssp             ECCCCCGGGEEESSTTSCCEEECCCTTCEECCTT--SCEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSC
T ss_pred             eeeeechhHeeeccCCCCeEEEeecchheecccc--cccceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCC
Confidence            5999999999996  4678999999999876532  33456789999999999998889999999999999999999999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||......+....+.....                                         ..    +.....    ....
T Consensus       224 Pf~~~~~~~~~~~i~~~~~-----------------------------------------~~----~~~~~~----~~s~  254 (350)
T d1koaa2         224 PFGGENDDETLRNVKSCDW-----------------------------------------NM----DDSAFS----GISE  254 (350)
T ss_dssp             SSCCSSHHHHHHHHHHTCC-----------------------------------------CS----CCGGGG----GCCH
T ss_pred             CCCCCCHHHHHHHHHhCCC-----------------------------------------CC----Cccccc----CCCH
Confidence            9976543322222211000                                         00    000000    1123


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhcccC
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNFETT  195 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~  195 (231)
                      .+.+|+.+||+.||++|||+.|+++|+++...
T Consensus       255 ~~~~li~~~L~~dP~~R~t~~eil~hp~~~~~  286 (350)
T d1koaa2         255 DGKDFIRKLLLADPNTRMTIHQALEHPWLTPG  286 (350)
T ss_dssp             HHHHHHHHHCCSSGGGSCCHHHHHHSTTTSCT
T ss_pred             HHHHHHHHHccCChhHCcCHHHHhcCcccCCC
Confidence            46788999999999999999999999998654

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.94  E-value=1.5e-27  Score=193.47  Aligned_cols=132  Identities=22%  Similarity=0.187  Sum_probs=102.6

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+|||++.++.+||+|||+++.....    ....+||+.|+|||++.+..++.++||||+||++|+|++|+.||
T Consensus       126 iHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~----~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf  201 (316)
T d1fota_         126 IYRDLKPENILLDKNGHIKITDFGFAKYVPDV----TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPF  201 (316)
T ss_dssp             ECCCCCGGGEEECTTSCEEECCCSSCEECSSC----BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTT
T ss_pred             EccccCchheeEcCCCCEEEecCccceEeccc----cccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCC
Confidence            59999999999999999999999999876432    23468999999999998888999999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      ...........+..                                          ..       .......    ...+
T Consensus       202 ~~~~~~~~~~~i~~------------------------------------------~~-------~~~p~~~----s~~~  228 (316)
T d1fota_         202 YDSNTMKTYEKILN------------------------------------------AE-------LRFPPFF----NEDV  228 (316)
T ss_dssp             CCSSHHHHHHHHHH------------------------------------------CC-------CCCCTTS----CHHH
T ss_pred             CCcCHHHHHHHHHc------------------------------------------CC-------CCCCCCC----CHHH
Confidence            76543321111110                                          00       0111111    2346


Q ss_pred             HHHHHhhcCCCCCCCC-----CHHHHHHHHhccc
Q 045790          166 LIVGLWCAHPDRCFRP-----SIRQAIQVLNFET  194 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rp-----s~~ell~~l~~~~  194 (231)
                      .+++.+||+.||.+|+     |+.++++|+++..
T Consensus       229 ~~li~~~L~~dp~~R~~~~r~t~~~il~Hp~f~~  262 (316)
T d1fota_         229 KDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKE  262 (316)
T ss_dssp             HHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSS
T ss_pred             HHHHHHHhhhCHHhccccchhhHHHHHcCccccc
Confidence            7889999999999996     9999999999855

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=2.3e-27  Score=193.90  Aligned_cols=135  Identities=19%  Similarity=0.183  Sum_probs=103.8

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+|||++.++.+||+|||+++..... .......+||+.|+|||++.+..++.++|+||+||++|+|++|+.||
T Consensus       127 iHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~-~~~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf  205 (337)
T d1o6la_         127 VYRDIKLENLMLDKDGHIKITDFGLCKEGISD-GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF  205 (337)
T ss_dssp             BCCCCCGGGEEECTTSCEEECCCTTCBCSCCT-TCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSS
T ss_pred             cccccCHHHeEecCCCCEEEeecccccccccC-CcccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCC
Confidence            49999999999999999999999999865432 22344578999999999999888999999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      ...........+....                                                 ..+....    ...+
T Consensus       206 ~~~~~~~~~~~i~~~~-------------------------------------------------~~~p~~~----s~~~  232 (337)
T d1o6la_         206 YNQDHERLFELILMEE-------------------------------------------------IRFPRTL----SPEA  232 (337)
T ss_dssp             CCSSHHHHHHHHHHCC-------------------------------------------------CCCCTTS----CHHH
T ss_pred             CCcCHHHHHHHHhcCC-------------------------------------------------CCCCccC----CHHH
Confidence            8655332211111100                                                 0111111    2345


Q ss_pred             HHHHHhhcCCCCCCCCC-----HHHHHHHHhccc
Q 045790          166 LIVGLWCAHPDRCFRPS-----IRQAIQVLNFET  194 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps-----~~ell~~l~~~~  194 (231)
                      .+|+..||+.||.+|++     +.|+++|++|..
T Consensus       233 ~dli~~~L~~dP~~R~~~~~~~~~eil~Hp~f~~  266 (337)
T d1o6la_         233 KSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLS  266 (337)
T ss_dssp             HHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTT
T ss_pred             HHHHHhhccCCchhhcccccccHHHHHcCccccc
Confidence            77899999999999994     999999999854

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.94  E-value=1.4e-27  Score=196.15  Aligned_cols=132  Identities=20%  Similarity=0.132  Sum_probs=102.4

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+|||++.++.+||+|||+++.....    .....||+.|+|||++.+..++.++||||+||++|+|++|..||
T Consensus       163 iHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~----~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf  238 (350)
T d1rdqe_         163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF  238 (350)
T ss_dssp             ECCCCSGGGEEECTTSCEEECCCTTCEECSSC----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred             ecCcCCHHHcccCCCCCEEeeeceeeeecccc----cccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCC
Confidence            59999999999999999999999999876532    23467999999999999888999999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      ...........+..                                          ..       .....    .....+
T Consensus       239 ~~~~~~~~~~~i~~------------------------------------------~~-------~~~p~----~~s~~~  265 (350)
T d1rdqe_         239 FADQPIQIYEKIVS------------------------------------------GK-------VRFPS----HFSSDL  265 (350)
T ss_dssp             CCSSHHHHHHHHHH------------------------------------------CC-------CCCCT----TCCHHH
T ss_pred             CCcCHHHHHHHHhc------------------------------------------CC-------CCCCc----cCCHHH
Confidence            76443211111110                                          00       00111    112346


Q ss_pred             HHHHHhhcCCCCCCCC-----CHHHHHHHHhccc
Q 045790          166 LIVGLWCAHPDRCFRP-----SIRQAIQVLNFET  194 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rp-----s~~ell~~l~~~~  194 (231)
                      .+++..||+.||.+|+     |+.+|++|++|..
T Consensus       266 ~~li~~~L~~dP~kR~~~~r~t~~ell~Hp~f~~  299 (350)
T d1rdqe_         266 KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFAT  299 (350)
T ss_dssp             HHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTT
T ss_pred             HHHHHHHhhhCHHhccccccccHHHHHcCccccC
Confidence            7889999999999994     9999999999854

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.8e-27  Score=192.71  Aligned_cols=138  Identities=24%  Similarity=0.205  Sum_probs=100.5

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCc---eeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPK---TIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGR   82 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~   82 (231)
                      .||||||+|||+++++.+||+|||+++.........   .....|+..|+|||.+....++.++||||||+++||+++|.
T Consensus       152 iHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~  231 (311)
T d1r0pa_         152 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG  231 (311)
T ss_dssp             CCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCCCTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred             ccCCccHHhEeECCCCCEEEecccchhhccccccccceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCC
Confidence            599999999999999999999999998765332211   22346788999999999999999999999999999999988


Q ss_pred             CccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           83 KVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        83 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      .||......                                      .++..++   .....          ...+....
T Consensus       232 ~p~~~~~~~--------------------------------------~~~~~~i---~~g~~----------~~~p~~~~  260 (311)
T d1r0pa_         232 APPYPDVNT--------------------------------------FDITVYL---LQGRR----------LLQPEYCP  260 (311)
T ss_dssp             CCSCC--------------------------------------------CHHHH---HTTCC----------CCCCTTCC
T ss_pred             CCCCCCCCH--------------------------------------HHHHHHH---HcCCC----------CCCcccCc
Confidence            777543211                                      0111111   11000          01111223


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      ..+.+|+.+||+.||++||||.||+++|+...
T Consensus       261 ~~l~~li~~cl~~dP~~RPs~~ei~~~L~~i~  292 (311)
T d1r0pa_         261 DPLYEVMLKCWHPKAEMRPSFSELVSRISAIF  292 (311)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence            45778999999999999999999999998753

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1e-27  Score=190.72  Aligned_cols=137  Identities=19%  Similarity=0.091  Sum_probs=100.2

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCc--eeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPK--TIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GR   82 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~   82 (231)
                      .||||||+||+++.++.+||+|||+++.........  .....|+..|+|||.+.+..++.++||||||+++|||++ |.
T Consensus       133 iHrDikp~NIll~~~~~vkl~DfGl~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~  212 (273)
T d1u46a_         133 IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQ  212 (273)
T ss_dssp             ECSCCCGGGEEEEETTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSC
T ss_pred             eeeeecHHHhccccccceeeccchhhhhcccCCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCC
Confidence            599999999999999999999999998765432222  233457789999999998889999999999999999997 89


Q ss_pred             CccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           83 KVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        83 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      .||......+....+..                                          .         ..+...+....
T Consensus       213 ~Pf~~~~~~~~~~~i~~------------------------------------------~---------~~~~~~~~~~~  241 (273)
T d1u46a_         213 EPWIGLNGSQILHKIDK------------------------------------------E---------GERLPRPEDCP  241 (273)
T ss_dssp             CTTTTCCHHHHHHHHHT------------------------------------------S---------CCCCCCCTTCC
T ss_pred             CCCCCcCHHHHHHHHHh------------------------------------------C---------CCCCCCccccc
Confidence            99976554322221111                                          0         00011111122


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHhcc
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLNFE  193 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~  193 (231)
                      ..+.+|+..||+.||++||||.+|++.|...
T Consensus       242 ~~l~~li~~cl~~dp~~RPt~~ei~~~L~~~  272 (273)
T d1u46a_         242 QDIYNVMVQCWAHKPEDRPTFVALRDFLLEA  272 (273)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence            4577899999999999999999999988753

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=2.6e-27  Score=191.11  Aligned_cols=155  Identities=18%  Similarity=0.106  Sum_probs=101.5

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCC---ceeEeeccccccchhhhhhCC------CCCCcccHhHHHHHH
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGP---KTIMLVGTLAYMASEYISTGR------VSKELDVFSFRVVAL   76 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~---~~~~~~g~~~y~aPE~~~~~~------~~~~~Dv~s~G~vl~   76 (231)
                      .||||||+|||++.++.+||+|||+++........   ......||+.|+|||++....      ++.++|||||||++|
T Consensus       130 vHrDlKp~NILl~~~~~~Kl~DFGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~  209 (303)
T d1vjya_         130 AHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFW  209 (303)
T ss_dssp             ECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHH
T ss_pred             eccccCccceEEcCCCCeEEEecCccccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHH
Confidence            49999999999999999999999999876543221   234567999999999986532      456799999999999


Q ss_pred             HHHhCCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCc
Q 045790           77 EIATGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSR  156 (231)
Q Consensus        77 el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  156 (231)
                      ||++|..||...........                         ..   ..................    ..+.+...
T Consensus       210 el~tg~~~~~~~~~~~~~~~-------------------------~~---~~~~~~~~~~~~~~~~~~----~~p~~~~~  257 (303)
T d1vjya_         210 EIARRCSIGGIHEDYQLPYY-------------------------DL---VPSDPSVEEMRKVVCEQK----LRPNIPNR  257 (303)
T ss_dssp             HHHHTBCBTTBCCCCCCTTT-------------------------TT---SCSSCCHHHHHHHHTTSC----CCCCCCGG
T ss_pred             HHhhCCCCCCcccccccchh-------------------------hc---ccccchHHHHHHHHhccc----cCCCCCcc
Confidence            99999888754221100000                         00   000011111111111111    11222121


Q ss_pred             c-cHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          157 F-DEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       157 ~-~~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      . ..+....+.+++.+||+.||++|||+.||+++|..
T Consensus       258 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~  294 (303)
T d1vjya_         258 WQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQ  294 (303)
T ss_dssp             GGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHH
T ss_pred             cCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHH
Confidence            1 22456678899999999999999999999999875

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.93  E-value=5.6e-27  Score=193.57  Aligned_cols=136  Identities=18%  Similarity=0.103  Sum_probs=100.8

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhh-CCCCCCcccHhHHHHHHHHHhCCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIST-GRVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      .||||||+|||++.++.+||+|||+++......   .....||+.|+|||++.. ..++.++||||+||++|+|++|+.|
T Consensus       129 iHrDlKP~NILl~~~g~iKl~DFGla~~~~~~~---~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~P  205 (364)
T d1omwa3         129 VYRDLKPANILLDEHGHVRISDLGLACDFSKKK---PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP  205 (364)
T ss_dssp             ECCCCSGGGEEECSSSCEEECCCTTCEECSSSC---CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             cceeeccceeEEcCCCcEEEeeeceeeecCCCc---ccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCC
Confidence            599999999999999999999999998765432   234579999999999965 4589999999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |......                                       ...... .....      ........+    ...
T Consensus       206 f~~~~~~---------------------------------------~~~~~~-~~~~~------~~~~~~~~~----s~~  235 (364)
T d1omwa3         206 FRQHKTK---------------------------------------DKHEID-RMTLT------MAVELPDSF----SPE  235 (364)
T ss_dssp             SCSSCSS---------------------------------------CHHHHH-HHSSS------CCCCCCSSS----CHH
T ss_pred             CCCCCHH---------------------------------------HHHHHH-Hhccc------CCCCCCCCC----CHH
Confidence            9753311                                       000000 00000      001111111    234


Q ss_pred             HHHHHHhhcCCCCCCCCC-----HHHHHHHHhccc
Q 045790          165 LLIVGLWCAHPDRCFRPS-----IRQAIQVLNFET  194 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps-----~~ell~~l~~~~  194 (231)
                      +.+|+.+||+.||++|||     +.|+++|++|..
T Consensus       236 ~~~li~~~L~~dP~~R~t~~~~~a~eil~Hp~f~~  270 (364)
T d1omwa3         236 LRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRS  270 (364)
T ss_dssp             HHHHHHHHTCSSTTTSTTTSSSTHHHHHTSGGGTT
T ss_pred             HHHHHHHHcccCHHHhCCCcccCHHHHHcCccccC
Confidence            678999999999999999     799999999864

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=2.1e-26  Score=186.90  Aligned_cols=169  Identities=15%  Similarity=-0.011  Sum_probs=106.7

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCC---CceeEeeccccccchhhhhhC-CCCCCcccHhHHHHHHHHHhC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELG---PKTIMLVGTLAYMASEYISTG-RVSKELDVFSFRVVALEIATG   81 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~el~~g   81 (231)
                      .||||||+|||++.++.+||+|||+++.......   ......+||+.|+|||++.+. .++.++||||+||++++|++|
T Consensus       139 vHrDlKp~NILl~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g  218 (318)
T d3blha1         139 LHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTR  218 (318)
T ss_dssp             ECCCCCGGGEEECTTSCEEECCCTTCEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHS
T ss_pred             EecCcCchheeecCCCcEEeeecceeeecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhC
Confidence            5999999999999999999999999976543221   112335789999999998765 588999999999999999999


Q ss_pred             CCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHH
Q 045790           82 RKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQ  161 (231)
Q Consensus        82 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  161 (231)
                      +.||...........+............................ .....+....             ..       ...
T Consensus       219 ~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-------------~~-------~~~  277 (318)
T d3blha1         219 SPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVK-GQKRKVKDRL-------------KA-------YVR  277 (318)
T ss_dssp             SCSCCCSSHHHHHHHHHHHHCCCCTTTSTTCCCC-------CCS-SCCBCHHHHH-------------HH-------HHC
T ss_pred             CCCCCCCCHHHHHHHHHHhcCCCChhhccccchhhhhhhhcccc-cccccchhhh-------------cc-------ccC
Confidence            99998766554444433311111111100000000000000000 0000000000             00       001


Q ss_pred             HHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccC
Q 045790          162 MTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETT  195 (231)
Q Consensus       162 ~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~  195 (231)
                      ...+.+|+.+||+.||++|||+.|+++|++|...
T Consensus       278 ~~~~~dLl~~mL~~dP~~R~sa~elL~Hpff~~~  311 (318)
T d3blha1         278 DPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSD  311 (318)
T ss_dssp             CHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGSSS
T ss_pred             CHHHHHHHHHHCcCChhHCcCHHHHHcChhhccC
Confidence            2245678999999999999999999999999753

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.5e-27  Score=189.79  Aligned_cols=128  Identities=17%  Similarity=0.184  Sum_probs=98.1

Q ss_pred             eecCCCCCCeeeCC-CCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCC-CCCcccHhHHHHHHHHHhCCC
Q 045790            6 YSRSPELPPGRGDF-NFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRV-SKELDVFSFRVVALEIATGRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~-~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~s~G~vl~el~~g~~   83 (231)
                      .||||||+|||++. ++.+||+|||+++.....   ......||+.|+|||++.+..+ +.++||||+||++|+|++|+.
T Consensus       132 iHrDiKp~NIll~~~~~~vkl~DFG~a~~~~~~---~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~  208 (273)
T d1xwsa_         132 LHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI  208 (273)
T ss_dssp             ECSCCSGGGEEEETTTTEEEECCCTTCEECCSS---CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSC
T ss_pred             ccccCcccceEEecCCCeEEECccccceecccc---cccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCC
Confidence            59999999999985 478999999999875432   2345679999999999987775 567899999999999999999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||......      ..                                           .      ...+....    ..
T Consensus       209 Pf~~~~~i------~~-------------------------------------------~------~~~~~~~~----s~  229 (273)
T d1xwsa_         209 PFEHDEEI------IR-------------------------------------------G------QVFFRQRV----SS  229 (273)
T ss_dssp             SCCSHHHH------HH-------------------------------------------C------CCCCSSCC----CH
T ss_pred             CCCCchHH------hh-------------------------------------------c------ccCCCCCC----CH
Confidence            99753210      00                                           0      00011111    13


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhcccC
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNFETT  195 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~  195 (231)
                      .+.+|+.+||+.||++|||+.|+++|+++...
T Consensus       230 ~~~~li~~~L~~dp~~R~s~~eil~hp~~~~~  261 (273)
T d1xwsa_         230 ECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV  261 (273)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSC
T ss_pred             HHHHHHHHHccCCHhHCcCHHHHhcCHhhCCC
Confidence            46778999999999999999999999998654

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=3.6e-27  Score=189.92  Aligned_cols=136  Identities=24%  Similarity=0.172  Sum_probs=101.9

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCC-ceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGP-KTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~   83 (231)
                      .||||||+|||++.++.+||+|||+++........ ......+++.|+|||.+.+..++.++||||||+++|||++ |..
T Consensus       157 vHrDiKp~NiLl~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~  236 (299)
T d1fgka_         157 IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGS  236 (299)
T ss_dssp             CCSCCSGGGEEECTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred             EeeeecccceeecCCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCC
Confidence            59999999999999999999999999876543222 2234567889999999999999999999999999999998 688


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||.......                                       +..    .+..         ......+.....
T Consensus       237 p~~~~~~~~---------------------------------------~~~----~i~~---------~~~~~~p~~~~~  264 (299)
T d1fgka_         237 PYPGVPVEE---------------------------------------LFK----LLKE---------GHRMDKPSNCTN  264 (299)
T ss_dssp             SSTTCCHHH---------------------------------------HHH----HHHT---------TCCCCCCSSCCH
T ss_pred             CCCCCCHHH---------------------------------------HHH----HHHc---------CCCCCCCccchH
Confidence            886543221                                       111    1100         111111112234


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhcc
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNFE  193 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~~  193 (231)
                      .+.+|+.+||+.||++||||.||++.|+..
T Consensus       265 ~l~~li~~cl~~dP~~Rps~~eil~~L~~i  294 (299)
T d1fgka_         265 ELYMMMRDCWHAVPSQRPTFKQLVEDLDRI  294 (299)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHccCCHhHCcCHHHHHHHHHHH
Confidence            578899999999999999999999999753

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=6.7e-27  Score=191.08  Aligned_cols=144  Identities=13%  Similarity=0.025  Sum_probs=101.9

Q ss_pred             eecCCCCCCeeeCC---CCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCC
Q 045790            6 YSRSPELPPGRGDF---NFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGR   82 (231)
Q Consensus         6 ~~rdlk~~nil~~~---~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~   82 (231)
                      .||||||+|||++.   .+.+||+|||+++......  ......|++.|+|||++.+..++.++||||+||++|+|++|+
T Consensus       133 iHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~  210 (335)
T d2ozaa1         133 AHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN--SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGY  210 (335)
T ss_dssp             ECCCCSGGGEEESCSSTTCCEEECCCTTCEECCCCC--CCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSS
T ss_pred             ccccccccccccccccccccccccccceeeeccCCC--ccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCC
Confidence            59999999999985   4679999999998765322  234567999999999998888999999999999999999999


Q ss_pred             CccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           83 KVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        83 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      .||...........+.....                                       ...      ..+.........
T Consensus       211 ~Pf~~~~~~~~~~~~~~~i~---------------------------------------~~~------~~~~~~~~~~~s  245 (335)
T d2ozaa1         211 PPFYSNHGLAISPGMKTRIR---------------------------------------MGQ------YEFPNPEWSEVS  245 (335)
T ss_dssp             CSCEETTCC--------CCC---------------------------------------SCS------SSCCTTHHHHSC
T ss_pred             CCCCCCCHHHHHHHHHHHHh---------------------------------------cCC------CCCCCcccccCC
Confidence            99976542111110000000                                       000      000000001123


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                      ..+.+|+.+||+.||++|||+.|+++|+++....
T Consensus       246 ~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~~  279 (335)
T d2ozaa1         246 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST  279 (335)
T ss_dssp             HHHHHHHHHHSCSSTTTSCCHHHHHHSHHHHTTT
T ss_pred             HHHHHHHHHHccCChhHCcCHHHHHcCHHhhCCC
Confidence            4567899999999999999999999999885443

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1.2e-26  Score=187.54  Aligned_cols=137  Identities=20%  Similarity=0.170  Sum_probs=101.7

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCc-eeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCC-C
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPK-TIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGR-K   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~-~   83 (231)
                      .|||||++|||++.++.+||+|||+++.+....... .....|++.|++||.+.+..++.++||||||+++|||++|. .
T Consensus       155 vHrDlk~~NiLld~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~  234 (308)
T d1p4oa_         155 VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQ  234 (308)
T ss_dssp             BCSCCSGGGEEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCC
T ss_pred             eeceEcCCceeecCCceEEEeecccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCC
Confidence            599999999999999999999999998664322211 23346789999999999999999999999999999999985 6


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||......+.                                          ...+.. ..         ....+.....
T Consensus       235 p~~~~~~~~~------------------------------------------~~~i~~-~~---------~~~~p~~~~~  262 (308)
T d1p4oa_         235 PYQGLSNEQV------------------------------------------LRFVME-GG---------LLDKPDNCPD  262 (308)
T ss_dssp             TTTTSCHHHH------------------------------------------HHHHHT-TC---------CCCCCTTCCH
T ss_pred             CCCCCCHHHH------------------------------------------HHHHHh-CC---------CCCCcccchH
Confidence            6754432211                                          111110 00         0111112234


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      .+.+++.+||+.||++||||.+|+++|+...
T Consensus       263 ~l~~li~~cl~~~P~~RPs~~~il~~L~~~~  293 (308)
T d1p4oa_         263 MLFELMRMCWQYNPKMRPSFLEIISSIKEEM  293 (308)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHGGGS
T ss_pred             HHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence            6788999999999999999999999998754

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.92  E-value=1.5e-26  Score=185.17  Aligned_cols=162  Identities=15%  Similarity=0.067  Sum_probs=102.9

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCC-CCCCcccHhHHHHHHHHHhCCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGR-VSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~-~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      .||||||+|||++.++.+|++|||.+....... .......+++.|++||.+.+.. ++.++||||+||++++|++|+.|
T Consensus       122 vHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~-~~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~p  200 (286)
T d1ob3a_         122 LHRDLKPQNLLINREGELKIADFGLARAFGIPV-RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPL  200 (286)
T ss_dssp             CCSCCCGGGEEECTTSCEEECCTTHHHHHCC----------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             EecCCCCceeeEcCCCCEEecccccceecccCc-cccceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCC
Confidence            599999999999999999999999998764322 2234456888999999987654 68999999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccc-cchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVE-GEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      |......+...++...........+...... .........  .               ....    ......    ...
T Consensus       201 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---------------~~~~----~~~~~~----~s~  255 (286)
T d1ob3a_         201 FPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVY--E---------------PLPW----ESFLKG----LDE  255 (286)
T ss_dssp             CCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCC--C---------------CCCG----GGTCCS----CCH
T ss_pred             CCCCCHHHHHHHHHHhhCCCChhhccchhhhhhcccccccc--c---------------Ccch----hhhccc----CCH
Confidence            9876655444443322111111111000000 000000000  0               0000    000011    123


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhcc
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNFE  193 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~~  193 (231)
                      .+.+|+.+||+.||++|||++|+++|+++.
T Consensus       256 ~~~dli~~~L~~dP~~R~s~~ell~Hp~f~  285 (286)
T d1ob3a_         256 SGIDLLSKMLKLDPNQRITAKQALEHAYFK  285 (286)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHHTSGGGG
T ss_pred             HHHHHHHHHccCChhHCcCHHHHhcCcccC
Confidence            567899999999999999999999999875

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1.4e-26  Score=187.45  Aligned_cols=136  Identities=20%  Similarity=0.159  Sum_probs=100.7

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCc-eeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPK-TIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~   83 (231)
                      .||||||+||+++.++.+|++|||.++......... .....|++.|+|||.+....++.++||||||+++|||++ |.+
T Consensus       167 vHrDLKp~NIl~~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p  246 (311)
T d1t46a_         167 IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSS  246 (311)
T ss_dssp             CCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCC
T ss_pred             eecccccccccccccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCC
Confidence            499999999999999999999999998765433222 234578999999999998899999999999999999998 555


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      +|.....                                      ...+...+             ....+...+.....
T Consensus       247 ~~~~~~~--------------------------------------~~~~~~~i-------------~~~~~~~~~~~~~~  275 (311)
T d1t46a_         247 PYPGMPV--------------------------------------DSKFYKMI-------------KEGFRMLSPEHAPA  275 (311)
T ss_dssp             SSTTCCS--------------------------------------SHHHHHHH-------------HHTCCCCCCTTSCH
T ss_pred             CCCCCCH--------------------------------------HHHHHHHH-------------hcCCCCCCcccccH
Confidence            5543221                                      11111111             11111122222335


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      .+.+|+.+||+.||++||||.+|+++|+.
T Consensus       276 ~l~~Li~~cl~~dP~~RPs~~~il~~L~~  304 (311)
T d1t46a_         276 EMYDIMKTCWDADPLKRPTFKQIVQLIEK  304 (311)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence            67889999999999999999999999975

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1.2e-26  Score=186.42  Aligned_cols=138  Identities=16%  Similarity=0.052  Sum_probs=101.7

Q ss_pred             eecCCCCCCeeeCCCC----cEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhC
Q 045790            6 YSRSPELPPGRGDFNF----NAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATG   81 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~----~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g   81 (231)
                      .||||||+||+++.++    .+|++|||++.....+  .......|++.|+|||++.+..++.++||||+||++|+|++|
T Consensus       135 vHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~~~~--~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g  212 (293)
T d1jksa_         135 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG--NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG  212 (293)
T ss_dssp             ECCCCSGGGEEESCSSSSSCCEEECCCTTCEECTTS--CBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHS
T ss_pred             eecccccceEEEecCCCcccceEecchhhhhhcCCC--ccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcC
Confidence            5999999999998765    4999999999876432  223345789999999999888899999999999999999999


Q ss_pred             CCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHH
Q 045790           82 RKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQ  161 (231)
Q Consensus        82 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  161 (231)
                      +.||......+....+.....                                         ...    +....    ..
T Consensus       213 ~~Pf~~~~~~~~~~~i~~~~~-----------------------------------------~~~----~~~~~----~~  243 (293)
T d1jksa_         213 ASPFLGDTKQETLANVSAVNY-----------------------------------------EFE----DEYFS----NT  243 (293)
T ss_dssp             SCSSCCSSHHHHHHHHHTTCC-----------------------------------------CCC----HHHHT----TS
T ss_pred             CCCCCCCCHHHHHHHHHhcCC-----------------------------------------CCC----chhcC----CC
Confidence            999976543322111110000                                         000    00000    11


Q ss_pred             HHHHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          162 MTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       162 ~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      ...+.+|+.+||+.||++|||+.|+++|+++..
T Consensus       244 s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~  276 (293)
T d1jksa_         244 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP  276 (293)
T ss_dssp             CHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTCC
T ss_pred             CHHHHHHHHHHccCChhHCcCHHHHhcCcccCC
Confidence            234678999999999999999999999999854

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=2.9e-26  Score=181.16  Aligned_cols=131  Identities=23%  Similarity=0.202  Sum_probs=93.8

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHh-CCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIAT-GRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~-g~~p   84 (231)
                      .||||||+||+++.++.+|++|||+++.....    .....++..|+|||++.+..++.++|||||||++|||++ |+.|
T Consensus       125 vH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~----~~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p  200 (262)
T d1byga_         125 VHRDLAARNVLVSEDNVAKVSDFGLTKEASST----QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP  200 (262)
T ss_dssp             CCSCCSGGGEEECTTSCEEECCCCC----------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCS
T ss_pred             eccccchHhheecCCCCEeecccccceecCCC----CccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCC
Confidence            59999999999999999999999999865422    233467889999999998999999999999999999998 6777


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |......                                       ++..++.             ...+...+......
T Consensus       201 ~~~~~~~---------------------------------------~~~~~i~-------------~~~~~~~~~~~~~~  228 (262)
T d1byga_         201 YPRIPLK---------------------------------------DVVPRVE-------------KGYKMDAPDGCPPA  228 (262)
T ss_dssp             CTTSCGG---------------------------------------GHHHHHT-------------TTCCCCCCTTCCHH
T ss_pred             CCCCCHH---------------------------------------HHHHHHH-------------cCCCCCCCccCCHH
Confidence            7643322                                       1212111             01111122222346


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhc
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNF  192 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~  192 (231)
                      +.+|+.+||+.||.+||||.+|+++|+.
T Consensus       229 ~~~li~~cl~~dP~~Rps~~~l~~~L~~  256 (262)
T d1byga_         229 VYEVMKNCWHLDAAMRPSFLQLREQLEH  256 (262)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHHHHcccCHhHCcCHHHHHHHHHH
Confidence            6789999999999999999999999975

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=8.2e-27  Score=189.41  Aligned_cols=135  Identities=19%  Similarity=0.123  Sum_probs=103.3

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||+|||++.++.+||+|||+++...... .......||+.|+|||++.+..++.++||||+||++|+|++|+.||
T Consensus       125 iHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF  203 (320)
T d1xjda_         125 VYRDLKLDNILLDKDGHIKIADFGMCKENMLGD-AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF  203 (320)
T ss_dssp             BCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred             eeccCcccceeecCCCceeccccchhhhccccc-ccccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCC
Confidence            599999999999999999999999998654322 2234467999999999999989999999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTCL  165 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  165 (231)
                      .+.........+..                                           .      .+....    .....+
T Consensus       204 ~~~~~~~~~~~i~~-------------------------------------------~------~~~~p~----~~s~~~  230 (320)
T d1xjda_         204 HGQDEEELFHSIRM-------------------------------------------D------NPFYPR----WLEKEA  230 (320)
T ss_dssp             CCSSHHHHHHHHHH-------------------------------------------C------CCCCCT----TSCHHH
T ss_pred             CCCCHHHHHHHHHc-------------------------------------------C------CCCCCc----cCCHHH
Confidence            76543322111110                                           0      011111    112346


Q ss_pred             HHHHHhhcCCCCCCCCCHH-HHHHHHhccc
Q 045790          166 LIVGLWCAHPDRCFRPSIR-QAIQVLNFET  194 (231)
Q Consensus       166 ~~l~~~c~~~dp~~Rps~~-ell~~l~~~~  194 (231)
                      .+|+.+||+.||++|||+. +|++|+++..
T Consensus       231 ~dli~~~L~~dP~~R~s~~~~l~~hpff~~  260 (320)
T d1xjda_         231 KDLLVKLFVREPEKRLGVRGDIRQHPLFRE  260 (320)
T ss_dssp             HHHHHHHSCSSGGGSBTTBSCGGGSGGGTT
T ss_pred             HHHHHHhcccCCCCCcCHHHHHHhCchhcc
Confidence            7899999999999999995 8999988753

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=2.3e-26  Score=185.12  Aligned_cols=165  Identities=17%  Similarity=0.036  Sum_probs=106.2

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCC-CCCCcccHhHHHHHHHHHhCCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGR-VSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~-~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      .||||||+|||++.++.+||+|||.++...... .......|++.|+|||.+.... ++.++|+||+||++++|++|+.|
T Consensus       124 iHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~-~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~P  202 (298)
T d1gz8a_         124 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL  202 (298)
T ss_dssp             CCSCCCGGGEEECTTSCEEECSTTHHHHHCCCS-BCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             EccccCchheeecccCcceeccCCcceeccCCc-ccceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCC
Confidence            499999999999999999999999998764322 2233457899999999987766 57889999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCC-CCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSK-NYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      |......+....+...........+........   ...... .....+.                  ....    ....
T Consensus       203 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~------------------~~~~----~~s~  257 (298)
T d1gz8a_         203 FPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD---YKPSFPKWARQDFS------------------KVVP----PLDE  257 (298)
T ss_dssp             CCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTT---CCTTSCCCCCCCHH------------------HHST----TCCH
T ss_pred             CCCCCHHHHHHHHHHhcCCCchhhccccccccc---cccccccccccchh------------------hhcc----CCCH
Confidence            987654443333322111110000000000000   000000 0000000                  0000    1123


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                      .+.+|+.+||+.||++|||+.||++|.++....
T Consensus       258 ~~~dll~~mL~~dP~~R~t~~ell~H~ff~~~~  290 (298)
T d1gz8a_         258 DGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT  290 (298)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTCC
T ss_pred             HHHHHHHHHccCChhHCcCHHHHhCCHhhccCC
Confidence            567889999999999999999999999986544

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=2.2e-26  Score=186.14  Aligned_cols=135  Identities=21%  Similarity=0.134  Sum_probs=98.7

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCC-Cc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGR-KV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~-~p   84 (231)
                      .||||||+|||++.++.+||+|||+++......  ......|+..|+|||.+.+..++.++|||||||++|||++|. .|
T Consensus       149 iHrDlkp~NIL~~~~~~~kl~DfG~a~~~~~~~--~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p  226 (309)
T d1fvra_         149 IHRDLAARNILVGENYVAKIADFGLSRGQEVYV--KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP  226 (309)
T ss_dssp             ECSCCSGGGEEECGGGCEEECCTTCEESSCEEC--CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCT
T ss_pred             cccccccceEEEcCCCceEEccccccccccccc--cccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCC
Confidence            599999999999999999999999997654321  123456889999999999989999999999999999999975 56


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |......++...+.                                                    ...+...+......
T Consensus       227 ~~~~~~~~~~~~i~----------------------------------------------------~~~~~~~~~~~~~~  254 (309)
T d1fvra_         227 YCGMTCAELYEKLP----------------------------------------------------QGYRLEKPLNCDDE  254 (309)
T ss_dssp             TTTCCHHHHHHHGG----------------------------------------------------GTCCCCCCTTBCHH
T ss_pred             CCCCCHHHHHHHHH----------------------------------------------------hcCCCCCCccCCHH
Confidence            75544322111111                                                    00011111122345


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      +.+|+.+||+.||++||||.||+++|+...
T Consensus       255 ~~~li~~cl~~dP~~RPs~~eil~~L~~i~  284 (309)
T d1fvra_         255 VYDLMRQCWREKPYERPSFAQILVSLNRML  284 (309)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence            778999999999999999999999987743

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=3.4e-26  Score=188.08  Aligned_cols=160  Identities=14%  Similarity=0.076  Sum_probs=104.4

Q ss_pred             eecCCCCCCeeeCCCC-cEEEeccccccccCCCCCCceeEeeccccccchhhhhhC-CCCCCcccHhHHHHHHHHHhCCC
Q 045790            6 YSRSPELPPGRGDFNF-NAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTG-RVSKELDVFSFRVVALEIATGRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~-~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~el~~g~~   83 (231)
                      .||||||+|||++.++ .+||+|||++.......  ......|+..|+|||.+.+. .++.++||||+||+++||++|+.
T Consensus       144 iHrDiKp~NILl~~~~~~~kl~DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~  221 (350)
T d1q5ka_         144 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP  221 (350)
T ss_dssp             ECCCCCGGGEEECTTTCCEEECCCTTCEECCTTS--CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSC
T ss_pred             cccCCCcceEEEecCCCceeEecccchhhccCCc--ccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCC
Confidence            5999999999999765 89999999998764322  22345789999999988654 58999999999999999999999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhc---chhhhhhcccccCcccHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGE---RKLLSAANERLDSRFDEQ  160 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~~~  160 (231)
                      ||......+.+..+...........                           .......   ..................
T Consensus       222 pf~~~~~~~~l~~i~~~~g~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (350)
T d1q5ka_         222 IFPGDSGVDQLVEIIKVLGTPTREQ---------------------------IREMNPNYTEFKFPQIKAHPWTKVFRPR  274 (350)
T ss_dssp             SSCCSSHHHHHHHHHHHHCCCCHHH---------------------------HHHHCC---CCCCCCCCCCCGGGTSCTT
T ss_pred             CCCCCCHHHHHHHHHHHhCCChHHh---------------------------hhhhccchhhccccccccCchhhhcccC
Confidence            9977654433333322111110000                           0000000   000000000000000111


Q ss_pred             HHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          161 QMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       161 ~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      ....+.+|+.+||+.||++|||+.|+++|+++..
T Consensus       275 ~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~  308 (350)
T d1q5ka_         275 TPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE  308 (350)
T ss_dssp             SCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGG
T ss_pred             CCHHHHHHHHHHccCChhHCcCHHHHhcCHhhcc
Confidence            2234678899999999999999999999999864

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.91  E-value=6.8e-26  Score=180.42  Aligned_cols=138  Identities=20%  Similarity=0.133  Sum_probs=101.5

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhh------CCCCCCcccHhHHHHHHHHH
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYIST------GRVSKELDVFSFRVVALEIA   79 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~------~~~~~~~Dv~s~G~vl~el~   79 (231)
                      .||||||+|||++.++.+||+|||+++......  ......||..|++||.+.+      ..++.++||||+||++++|+
T Consensus       132 vHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~--~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml  209 (277)
T d1phka_         132 VHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE--KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLL  209 (277)
T ss_dssp             ECSCCSGGGEEECTTCCEEECCCTTCEECCTTC--CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHH
T ss_pred             cccccccceEEEcCCCCeEEccchheeEccCCC--ceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhc
Confidence            599999999999999999999999998765432  2344678999999999863      23577899999999999999


Q ss_pred             hCCCccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccH
Q 045790           80 TGRKVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDE  159 (231)
Q Consensus        80 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  159 (231)
                      +|+.||...........+....                                           ..      .......
T Consensus       210 ~g~~Pf~~~~~~~~~~~i~~~~-------------------------------------------~~------~~~~~~~  240 (277)
T d1phka_         210 AGSPPFWHRKQMLMLRMIMSGN-------------------------------------------YQ------FGSPEWD  240 (277)
T ss_dssp             HSSCSSCCSSHHHHHHHHHHTC-------------------------------------------CC------CCTTTGG
T ss_pred             cCCCCCCCCCHHHHHHHHHhCC-------------------------------------------CC------CCCcccc
Confidence            9999997654332111111100                                           00      0000001


Q ss_pred             HHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          160 QQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       160 ~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      .....+.+|+.+||+.||++|||+.||++|.++..
T Consensus       241 ~~s~~~~~li~~~L~~~p~~R~s~~eil~h~~~~~  275 (277)
T d1phka_         241 DYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ  275 (277)
T ss_dssp             GSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCT
T ss_pred             cCCHHHHHHHHHHccCChhHCcCHHHHHcCHHHHH
Confidence            11235678999999999999999999999998853

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.1e-25  Score=182.92  Aligned_cols=140  Identities=14%  Similarity=0.043  Sum_probs=103.6

Q ss_pred             eecCCCCCCeeeCC--CCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCC
Q 045790            6 YSRSPELPPGRGDF--NFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~--~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~   83 (231)
                      .||||||+|||++.  ...+||+|||+++.....  .......+++.|++||.+.+..++.++||||+||++|+|++|..
T Consensus       124 iHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~--~~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~  201 (321)
T d1tkia_         124 GHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG--DNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGIN  201 (321)
T ss_dssp             ECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT--CEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSC
T ss_pred             CcccccccceeecCCCceEEEEcccchhhccccC--CcccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCC
Confidence            59999999999984  457999999999876432  23455688999999999988889999999999999999999999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||......+....+......                                         .    +......    ...
T Consensus       202 Pf~~~~~~~~~~~i~~~~~~-----------------------------------------~----~~~~~~~----~s~  232 (321)
T d1tkia_         202 PFLAETNQQIIENIMNAEYT-----------------------------------------F----DEEAFKE----ISI  232 (321)
T ss_dssp             TTCCSSHHHHHHHHHHTCCC-----------------------------------------C----CHHHHTT----SCH
T ss_pred             CCCCCCHHHHHHHHHhCCCC-----------------------------------------C----ChhhccC----CCH
Confidence            99765533222222111000                                         0    0000000    123


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          164 CLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                      .+.+|+.+||+.||++|||+.|+++|+++....
T Consensus       233 ~~~~li~~~L~~dp~~R~s~~eil~hp~~~~~~  265 (321)
T d1tkia_         233 EAMDFVDRLLVKERKSRMTASEALQHPWLKQKI  265 (321)
T ss_dssp             HHHHHHHTTSCSSGGGSCCHHHHHHSHHHHSCG
T ss_pred             HHHHHHHHHccCChhHCcCHHHHhcCHhhccCc
Confidence            467899999999999999999999999986543

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.4e-25  Score=184.11  Aligned_cols=164  Identities=18%  Similarity=0.090  Sum_probs=106.8

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhC-CCCCCcccHhHHHHHHHHHhCCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTG-RVSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      .||||||+|||++.++.+|++|||+++.....    .....|++.|+|||++.+. .++.++||||+||++++|++|..|
T Consensus       143 iHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~p  218 (346)
T d1cm8a_         143 IHRDLKPGNLAVNEDCELKILDFGLARQADSE----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTL  218 (346)
T ss_dssp             ECCCCCGGGEEECTTCCEEECCCTTCEECCSS----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCS
T ss_pred             cccccCcchhhcccccccccccccceeccCCc----cccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCC
Confidence            59999999999999999999999999876432    2345789999999998764 468999999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |...........+.............                ................     .....+. .........
T Consensus       219 f~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~-----~~~~~~~-~~~~~~s~~  276 (346)
T d1cm8a_         219 FKGSDHLDQLKEIMKVTGTPPAEFVQ----------------RLQSDEAKNYMKGLPE-----LEKKDFA-SILTNASPL  276 (346)
T ss_dssp             SCCSSHHHHHHHHHHHHCCCCHHHHH----------------TCSCHHHHHHHHHSCC-----CCCCCGG-GTCTTCCHH
T ss_pred             CCCCChHHHHHHHHhccCCCcHHHHh----------------hhcchhhhhhhccCCc-----ccccchH-HhccCCCHH
Confidence            98765444333333211111110000                0000000000000000     0000000 000111234


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhcccC
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNFETT  195 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~  195 (231)
                      +.+|+.+||+.||.+|||+.||++|+++...
T Consensus       277 ~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~~  307 (346)
T d1cm8a_         277 AVNLLEKMLVLDAEQRVTAGEALAHPYFESL  307 (346)
T ss_dssp             HHHHHHHHSCSSTTTSCCHHHHHHSGGGTTT
T ss_pred             HHHHHHHHCcCChhHCcCHHHHhcChhhCcC
Confidence            5789999999999999999999999998754

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.91  E-value=6.8e-25  Score=174.64  Aligned_cols=138  Identities=22%  Similarity=0.150  Sum_probs=93.6

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCC--CceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELG--PKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~   83 (231)
                      .||||||+|||++.++..+++|||.+........  ......+||+.|+|||++.+..++.++||||+||++++|++|..
T Consensus       133 iHrDiKP~NIll~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~  212 (277)
T d1o6ya_         133 IHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEP  212 (277)
T ss_dssp             ECCCCSGGGEEEETTSCEEECCCTTCEECC----------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSC
T ss_pred             cCccccCcccccCccccceeehhhhhhhhccccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCC
Confidence            5999999999999999999999998876543221  22345679999999999988889999999999999999999999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||...........+....+                                         .......    .    ....
T Consensus       213 Pf~~~~~~~~~~~~~~~~~-----------------------------------------~~~~~~~----~----~~s~  243 (277)
T d1o6ya_         213 PFTGDSPVSVAYQHVREDP-----------------------------------------IPPSARH----E----GLSA  243 (277)
T ss_dssp             SCCCSSHHHHHHHHHHCCC-----------------------------------------CCGGGTS----S----SCCH
T ss_pred             CCCCcCHHHHHHHHHhcCC-----------------------------------------CCCchhc----c----CCCH
Confidence            9976543222111111100                                         0000001    1    1124


Q ss_pred             HHHHHHHhhcCCCCCCCC-CHHHHHHHHhc
Q 045790          164 CLLIVGLWCAHPDRCFRP-SIRQAIQVLNF  192 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rp-s~~ell~~l~~  192 (231)
                      .+.+++.+||+.||++|| |+.+++..|..
T Consensus       244 ~l~~li~~~L~~dp~~R~~sa~~l~~~l~r  273 (277)
T d1o6ya_         244 DLDAVVLKALAKNPENRYQTAAEMRADLVR  273 (277)
T ss_dssp             HHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred             HHHHHHHHHccCCHhHCHhHHHHHHHHHHH
Confidence            567889999999999999 79998887753

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=2.8e-25  Score=180.49  Aligned_cols=140  Identities=19%  Similarity=0.177  Sum_probs=102.3

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCC--CCCCcccHhHHHHHHHHHhCCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGR--VSKELDVFSFRVVALEIATGRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~--~~~~~Dv~s~G~vl~el~~g~~   83 (231)
                      .||||||+|||++.++.+||+|||+++.+............|++.|++||.+.+..  ++.++||||+||++++|++|+.
T Consensus       151 vHrDiKp~Nill~~~~~vkL~DFG~a~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~  230 (322)
T d1vzoa_         151 IYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGAS  230 (322)
T ss_dssp             CCCCCCGGGEEECTTSCEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSC
T ss_pred             EeccCCccceeecCCCCEEEeeccchhhhcccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCC
Confidence            49999999999999999999999999876543333345567899999999997643  6778999999999999999999


Q ss_pred             ccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHH
Q 045790           84 VINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMT  163 (231)
Q Consensus        84 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  163 (231)
                      ||......                                   .   ............       .+    .++.....
T Consensus       231 PF~~~~~~-----------------------------------~---~~~~i~~~~~~~-------~~----~~~~~~s~  261 (322)
T d1vzoa_         231 PFTVDGEK-----------------------------------N---SQAEISRRILKS-------EP----PYPQEMSA  261 (322)
T ss_dssp             TTSCTTSC-----------------------------------C---CHHHHHHHHHHC-------CC----CCCTTSCH
T ss_pred             CCCCCCHH-----------------------------------H---HHHHHHHhcccC-------CC----CCcccCCH
Confidence            99754321                                   0   011111111000       01    11122345


Q ss_pred             HHHHHHHhhcCCCCCCCC-----CHHHHHHHHhccc
Q 045790          164 CLLIVGLWCAHPDRCFRP-----SIRQAIQVLNFET  194 (231)
Q Consensus       164 ~~~~l~~~c~~~dp~~Rp-----s~~ell~~l~~~~  194 (231)
                      .+.+|+.+||+.||++||     |+.|+++|+++..
T Consensus       262 ~~~~li~~~l~~dP~~R~s~~~~t~~eil~Hpff~~  297 (322)
T d1vzoa_         262 LAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQK  297 (322)
T ss_dssp             HHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTT
T ss_pred             HHHHHHHHHcccCHHHcCCCCcccHHHHHcCHhhcC
Confidence            678899999999999999     5899999999854

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=4.6e-25  Score=181.57  Aligned_cols=173  Identities=16%  Similarity=0.018  Sum_probs=105.5

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHHHhCCCcc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEIATGRKVI   85 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el~~g~~p~   85 (231)
                      .||||||.|||++.++.+|++|||+++.....  .......+|..|+|||++.+..++.++||||+||++++|++|+.||
T Consensus       141 iHrDlKP~Nil~~~~~~~kl~df~~~~~~~~~--~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF  218 (355)
T d2b1pa1         141 IHRDLKPSNIVVKSDCTLKILDFGLARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF  218 (355)
T ss_dssp             CCSCCCGGGEEECTTCCEEECCCCC-----------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSS
T ss_pred             ccccCCccccccccccceeeechhhhhccccc--cccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCC
Confidence            59999999999999999999999998765432  2234557899999999999888999999999999999999999999


Q ss_pred             ccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhccccc---CcccHHHH
Q 045790           86 NRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLD---SRFDEQQM  162 (231)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~  162 (231)
                      ...........+...........+...................              ......+.....   ........
T Consensus       219 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~s  284 (355)
T d2b1pa1         219 PGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAG--------------LTFPKLFPDSLFPADSEHNKLKA  284 (355)
T ss_dssp             CCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHHHHHHTSCCCCC--------------CCHHHHSCGGGSCCSSHHHHHHH
T ss_pred             CCCCHHHHHHHHHHhccCCCHHHHHHhhhhHHHHhhcCccccc--------------cccccccccccccccccccccCC
Confidence            8765544444443322222211111110000000000000000              000111111111   11122345


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHhccc
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLNFET  194 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~  194 (231)
                      ..+.+|+.+||+.||++||||.||++|+++..
T Consensus       285 ~~~~dll~~mL~~dP~~R~ta~elL~Hpw~~~  316 (355)
T d2b1pa1         285 SQARDLLSKMLVIDPAKRISVDDALQHPYINV  316 (355)
T ss_dssp             HHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGG
T ss_pred             HHHHHHHHHHCcCChhHCcCHHHHhcCcccCC
Confidence            67889999999999999999999999999965

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=2.1e-24  Score=176.92  Aligned_cols=169  Identities=19%  Similarity=0.082  Sum_probs=104.8

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCC--CceeEeeccccccchhhhhh-CCCCCCcccHhHHHHHHHHHhCC
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELG--PKTIMLVGTLAYMASEYIST-GRVSKELDVFSFRVVALEIATGR   82 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~el~~g~   82 (231)
                      .||||||+|||++.++.+||+|||++........  ......+|++.|+|||++.. ..++.++||||+||++++|++|+
T Consensus       131 iHRDIKp~NILl~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~  210 (345)
T d1pmea_         131 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR  210 (345)
T ss_dssp             ECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSS
T ss_pred             cCCCCCcceEEECCCCCEEEcccCceeeccCCCccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCC
Confidence            5999999999999999999999999976543221  12345678999999999855 45788999999999999999999


Q ss_pred             CccccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           83 KVINRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        83 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      .||......+.................                 ........+............... .+....    .
T Consensus       211 ~pf~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~----s  268 (345)
T d1pmea_         211 PIFPGKHYLDQLNHILGILGSPSQEDL-----------------NCIINLKARNYLLSLPHKNKVPWN-RLFPNA----D  268 (345)
T ss_dssp             CSCCCSSHHHHHHHHHHHHCSCCHHHH-----------------HTCCCHHHHHHHHTSCCCCCCCHH-HHCTTS----C
T ss_pred             CCCCCCCHHHHHHHHhhhccCCChhhh-----------------hhhhhhhhhcccccCCccCCCCHH-HhCCCC----C
Confidence            999765543222222211110000000                 000000000000000000000000 000111    1


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                      ..+.+|+.+||+.||.+|||+.|+++|+++....
T Consensus       269 ~~~~~li~~~L~~dP~~R~ta~e~L~hpf~~~~~  302 (345)
T d1pmea_         269 SKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY  302 (345)
T ss_dssp             HHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTTC
T ss_pred             HHHHHHHHHHccCChhHCcCHHHHhcCHhhccCC
Confidence            3567899999999999999999999999886544

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.90  E-value=3.7e-24  Score=176.31  Aligned_cols=177  Identities=12%  Similarity=0.001  Sum_probs=103.8

Q ss_pred             eeecCCCCCCeeeCCCC------cEEEeccccccccCCCCCCceeEeeccccccchhhhhhCCCCCCcccHhHHHHHHHH
Q 045790            5 AYSRSPELPPGRGDFNF------NAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVALEI   78 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~------~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el   78 (231)
                      -+||||||+|||++.++      .++++|||.+......    ....+|++.|+|||++....++.++|+||+||++++|
T Consensus       147 IvHrDlKp~NIll~~~~~~~~~~~~kl~dfg~s~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el  222 (362)
T d1q8ya_         147 IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFEL  222 (362)
T ss_dssp             EECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTBC----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHH
T ss_pred             cccccCChhHeeeeccCcccccceeeEeecccccccccc----cccccccccccChhhccccCCCccccccchHHHHHHH
Confidence            46999999999998554      3899999998765422    2345789999999999988899999999999999999


Q ss_pred             HhCCCccccchhhhh------hhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhccc
Q 045790           79 ATGRKVINRYKAQKL------RTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANER  152 (231)
Q Consensus        79 ~~g~~p~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (231)
                      ++|+.||........      ...........+..... ........+..............        .......  .
T Consensus       223 ~~g~~pF~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~--~  291 (362)
T d1q8ya_         223 ITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLR-NGKYTRTFFNSRGLLRNISKLKF--------WPLEDVL--T  291 (362)
T ss_dssp             HHSSCCC---------CHHHHHHHHHHHHCSCCHHHHH-HCTTHHHHBCC--CBSSCCCCCB--------CCHHHHH--H
T ss_pred             HHCCCCCCCCccccccchhHHHHHHHHHhCCCCHHHhh-cccccccccccchhhhccccccC--------Cchhhhc--c
Confidence            999999975432100      00000000000000000 00000000000000000000000        0000000  0


Q ss_pred             ccCcccHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          153 LDSRFDEQQMTCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       153 l~~~~~~~~~~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                      ............+.+|+.+|+++||++||||.||++|++|....
T Consensus       292 ~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~Hp~f~~~~  335 (362)
T d1q8ya_         292 EKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTL  335 (362)
T ss_dssp             HTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTCT
T ss_pred             cccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhcCcccCCCC
Confidence            11234456677889999999999999999999999999997444

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1.4e-24  Score=173.84  Aligned_cols=165  Identities=15%  Similarity=0.003  Sum_probs=102.7

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCC-CCCCcccHhHHHHHHHHHhCCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGR-VSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~-~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      .||||||+|||++.++.+|++|||.++....... ......++..|++||.+.... ++.++||||+||++++|++|+.|
T Consensus       123 vHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p  201 (292)
T d1unla_         123 LHRDLKPQNLLINRNGELKLANFGLARAFGIPVR-CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRP  201 (292)
T ss_dssp             ECCCCSGGGEEECTTCCEEECCCTTCEECCSCCS-CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCC
T ss_pred             eeecccCcccccccCCceeeeecchhhcccCCCc-cceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCC
Confidence            5999999999999999999999999987653222 223345677899999987665 68899999999999999999988


Q ss_pred             ccc-chhhhhhhhccccCCCCCCccccccccc-cchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHH
Q 045790           85 INR-YKAQKLRTQFVVPHPCSNTGSVEKLGVE-GEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQM  162 (231)
Q Consensus        85 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (231)
                      |.. ....+....+...........+...... ........                       . .... .........
T Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~-~~~~-~~~~~~~~s  256 (292)
T d1unla_         202 LFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMY-----------------------P-ATTS-LVNVVPKLN  256 (292)
T ss_dssp             SCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCC-----------------------C-TTCC-CTTTSTTCC
T ss_pred             CCCCCCHHHHHHHHHhhcCCCChhhhhhhhhcccccccccc-----------------------c-ccch-hhhccccCC
Confidence            643 2223222222221111111100000000 00000000                       0 0000 000011112


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHhcccCC
Q 045790          163 TCLLIVGLWCAHPDRCFRPSIRQAIQVLNFETTM  196 (231)
Q Consensus       163 ~~~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~~  196 (231)
                      ..+.+|+.+||+.||.+||||.||++|+++..-.
T Consensus       257 ~~~~dll~~mL~~dP~~R~sa~e~L~Hp~f~~~~  290 (292)
T d1unla_         257 ATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFC  290 (292)
T ss_dssp             HHHHHHHHHHSCSSGGGSCCHHHHTTSGGGSSCS
T ss_pred             HHHHHHHHHHccCChhHCcCHHHHhcChhhcCCC
Confidence            3467889999999999999999999999996533

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.90  E-value=1.4e-24  Score=174.68  Aligned_cols=84  Identities=19%  Similarity=0.048  Sum_probs=69.8

Q ss_pred             eecCCCCCCeeeC---CCCcEEEeccccccccCCCCCC------ceeEeeccccccchhhhhhCCCCCCcccHhHHHHHH
Q 045790            6 YSRSPELPPGRGD---FNFNAKLGDFGLARLMDHELGP------KTIMLVGTLAYMASEYISTGRVSKELDVFSFRVVAL   76 (231)
Q Consensus         6 ~~rdlk~~nil~~---~~~~~kl~Dfg~~~~~~~~~~~------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~   76 (231)
                      .||||||+|||++   .+..+|++|||+++........      ......||+.|+|||.+.+..++.++||||+||+++
T Consensus       125 iHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~  204 (299)
T d1ckia_         125 IHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLM  204 (299)
T ss_dssp             ECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTTCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHH
T ss_pred             eeccCCHhhccccccCCCceeeeeccCcceeccccccccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHH
Confidence            5999999999875   4567999999999876543221      123457999999999998888999999999999999


Q ss_pred             HHHhCCCccccch
Q 045790           77 EIATGRKVINRYK   89 (231)
Q Consensus        77 el~~g~~p~~~~~   89 (231)
                      ||++|+.||....
T Consensus       205 el~tg~~P~~~~~  217 (299)
T d1ckia_         205 YFNLGSLPWQGLK  217 (299)
T ss_dssp             HHHHSSCTTCCCC
T ss_pred             HHHhCCCcccccc
Confidence            9999999997543

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.89  E-value=3.6e-24  Score=174.35  Aligned_cols=81  Identities=15%  Similarity=0.119  Sum_probs=67.3

Q ss_pred             eecCCCCCCeeeCCC-CcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCC-CCCCcccHhHHHHHHHHHhCCC
Q 045790            6 YSRSPELPPGRGDFN-FNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGR-VSKELDVFSFRVVALEIATGRK   83 (231)
Q Consensus         6 ~~rdlk~~nil~~~~-~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~-~~~~~Dv~s~G~vl~el~~g~~   83 (231)
                      .||||||+|||++.+ ..+||+|||+++......  ......+|..|+|||.+.+.. ++.++||||+||+++++++|..
T Consensus       151 vHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~  228 (328)
T d3bqca1         151 MHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ--EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKE  228 (328)
T ss_dssp             ECCCCSGGGEEEETTTTEEEECCGGGCEECCTTC--CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCS
T ss_pred             ccccccccceEEcCCCCeeeecccccceeccCCC--cccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCC
Confidence            499999999999864 469999999998765432  234457889999999987654 7899999999999999999999


Q ss_pred             ccccc
Q 045790           84 VINRY   88 (231)
Q Consensus        84 p~~~~   88 (231)
                      ||...
T Consensus       229 pf~~~  233 (328)
T d3bqca1         229 PFFHG  233 (328)
T ss_dssp             SSSCC
T ss_pred             CCCCC
Confidence            99653

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=4e-24  Score=175.31  Aligned_cols=164  Identities=16%  Similarity=0.087  Sum_probs=102.0

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchhhhhhCC-CCCCcccHhHHHHHHHHHhCCCc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASEYISTGR-VSKELDVFSFRVVALEIATGRKV   84 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~-~~~~~Dv~s~G~vl~el~~g~~p   84 (231)
                      .||||||+|||++.++.+|++|||++.....    ......|+..|+|||.+.+.. ++.++||||+||++++|++|..|
T Consensus       143 iHrDiKp~NILi~~~~~~kl~dfg~a~~~~~----~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~p  218 (348)
T d2gfsa1         143 IHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL  218 (348)
T ss_dssp             CCCCCCGGGEEECTTCCEEECCC----CCTG----GGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCS
T ss_pred             cccccCCccccccccccccccccchhcccCc----ccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCC
Confidence            4999999999999999999999999876432    223457888999999976654 68899999999999999999999


Q ss_pred             cccchhhhhhhhccccCCCCCCccccccccccchhhccCCCCCCCchhHHHHHHHhhcchhhhhhcccccCcccHHHHHH
Q 045790           85 INRYKAQKLRTQFVVPHPCSNTGSVEKLGVEGEKAVLGGSSKNYCPKLVAWVWDLYGERKLLSAANERLDSRFDEQQMTC  164 (231)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  164 (231)
                      |...........+.................               .....+...      ........+.. ........
T Consensus       219 F~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---------------~~~~~~~~~------~~~~~~~~~~~-~~~~~s~~  276 (348)
T d2gfsa1         219 FPGTDHIDQLKLILRLVGTPGAELLKKISS---------------ESARNYIQS------LTQMPKMNFAN-VFIGANPL  276 (348)
T ss_dssp             CCCSSHHHHHHHHHHHHCCCCHHHHTTCCC---------------HHHHHHHTT------SCCCCCCCHHH-HSTTCCHH
T ss_pred             CCCCCHHHHHHHHHHhcCCCChHHhhhccc---------------hhhhhhhhh------cccCCCcchhh-hcCCCCHH
Confidence            987665444444332222111111000000               000000000      00000000000 00011234


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHhcccC
Q 045790          165 LLIVGLWCAHPDRCFRPSIRQAIQVLNFETT  195 (231)
Q Consensus       165 ~~~l~~~c~~~dp~~Rps~~ell~~l~~~~~  195 (231)
                      +.+|+.+||+.||++|||+.|+++|+++...
T Consensus       277 ~~dli~~mL~~dP~~R~ta~elL~Hp~f~~~  307 (348)
T d2gfsa1         277 AVDLLEKMLVLDSDKRITAAQALAHAYFAQY  307 (348)
T ss_dssp             HHHHHHHHSCSSGGGSCCHHHHHTSGGGTTT
T ss_pred             HHHHHHHHCcCChhhCcCHHHHhcCHhhCCC
Confidence            6789999999999999999999999999653

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.88  E-value=3.6e-23  Score=165.90  Aligned_cols=83  Identities=16%  Similarity=0.053  Sum_probs=69.7

Q ss_pred             eecCCCCCCeeeCC-----CCcEEEeccccccccCCCCCC------ceeEeeccccccchhhhhhCCCCCCcccHhHHHH
Q 045790            6 YSRSPELPPGRGDF-----NFNAKLGDFGLARLMDHELGP------KTIMLVGTLAYMASEYISTGRVSKELDVFSFRVV   74 (231)
Q Consensus         6 ~~rdlk~~nil~~~-----~~~~kl~Dfg~~~~~~~~~~~------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~v   74 (231)
                      .||||||+|||++.     .+.+||+|||+++........      .....+||+.|+|||++.+..++.++||||+|++
T Consensus       123 iHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~  202 (293)
T d1csna_         123 VYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHV  202 (293)
T ss_dssp             ECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHH
T ss_pred             eeccCCccceeecCcccccCCceEEcccceeEEcccCccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHH
Confidence            59999999999974     567999999999876532211      1234679999999999988889999999999999


Q ss_pred             HHHHHhCCCccccc
Q 045790           75 ALEIATGRKVINRY   88 (231)
Q Consensus        75 l~el~~g~~p~~~~   88 (231)
                      +++|++|..||...
T Consensus       203 l~elltg~~Pf~~~  216 (293)
T d1csna_         203 FMYFLRGSLPWQGL  216 (293)
T ss_dssp             HHHHHHSSCTTSSC
T ss_pred             HHHHHhCCCcCCCc
Confidence            99999999999753

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.25  E-value=1.5e-07  Score=69.05  Aligned_cols=59  Identities=10%  Similarity=-0.161  Sum_probs=37.9

Q ss_pred             eecCCCCCCeeeCCCCcEEEeccccccccCCCCCCceeEeeccccccchh--h---hhhCCCCCCcccHhHHHH
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLARLMDHELGPKTIMLVGTLAYMASE--Y---ISTGRVSKELDVFSFRVV   74 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g~~~y~aPE--~---~~~~~~~~~~Dv~s~G~v   74 (231)
                      +||||||.|||++.+ .++|+|||.+........   .      .|....  .   .....|+.++|+||..--
T Consensus       125 iHrDiKP~NILv~~~-~~~liDFG~a~~~~~~~~---~------~~l~rd~~~~~~~f~r~y~~~~d~~s~~~~  188 (191)
T d1zara2         125 VHGDLSQYNVLVSEE-GIWIIDFPQSVEVGEEGW---R------EILERDVRNIITYFSRTYRTEKDINSAIDR  188 (191)
T ss_dssp             ECSCCSTTSEEEETT-EEEECCCTTCEETTSTTH---H------HHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
T ss_pred             EEccCChhheeeeCC-CEEEEECCCcccCCCCCc---H------HHHHHHHHHHHHHHcCCCCCcccHHHHHHH
Confidence            599999999999965 588999999876542211   0      011110  0   112456788999997543

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=84.69  E-value=0.19  Score=36.72  Aligned_cols=27  Identities=7%  Similarity=-0.263  Sum_probs=23.1

Q ss_pred             eecCCCCCCeeeCCCCcEEEecccccc
Q 045790            6 YSRSPELPPGRGDFNFNAKLGDFGLAR   32 (231)
Q Consensus         6 ~~rdlk~~nil~~~~~~~kl~Dfg~~~   32 (231)
                      .|.|+.+.||+++++..+.|+||+.+.
T Consensus       186 ~HgD~~~~Nil~~~~~~~~lIDwe~a~  212 (263)
T d1j7la_         186 SHGDLGDSNIFVKDGKVSGFIDLGRSG  212 (263)
T ss_dssp             ECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred             EEeeccCcceeecCCceEEEeechhcc
Confidence            499999999999987667799998764

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=82.20  E-value=0.21  Score=36.38  Aligned_cols=28  Identities=14%  Similarity=-0.077  Sum_probs=23.6

Q ss_pred             eeecCCCCCCeeeCCCCcEEEecccccc
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLAR   32 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~   32 (231)
                      -.|+|+.+.||+++.+..+.|+||+.+.
T Consensus       177 liHgD~~~~Nvl~~~~~~~~iID~~~~~  204 (255)
T d1nd4a_         177 VTHGDACLPNIMVENGRFSGFIDCGRLG  204 (255)
T ss_dssp             EECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred             EEeCCCCCcceEEeCCceEEEEEchhcc
Confidence            3599999999999987667899998764

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=80.53  E-value=0.24  Score=37.48  Aligned_cols=28  Identities=14%  Similarity=-0.312  Sum_probs=24.4

Q ss_pred             eeecCCCCCCeeeCCCCcEEEecccccc
Q 045790            5 AYSRSPELPPGRGDFNFNAKLGDFGLAR   32 (231)
Q Consensus         5 ~~~rdlk~~nil~~~~~~~kl~Dfg~~~   32 (231)
                      ..|.|+.+.||+++.+...-|.||+.+.
T Consensus       185 iIHgDl~~dNvl~~~~~v~gvIDF~~~~  212 (316)
T d2ppqa1         185 VIHADLFQDNVFFLGDELSGLIDFYFAC  212 (316)
T ss_dssp             EECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred             cccCCcchhhhhcccccceeEecccccc
Confidence            3599999999999988777899999764