BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045791
(290 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1EKJ|A Chain A, The X-Ray Crystallographic Structure Of Beta Carbonic
Anhydrase From The C3 Dicot Pisum Sativum
pdb|1EKJ|B Chain B, The X-Ray Crystallographic Structure Of Beta Carbonic
Anhydrase From The C3 Dicot Pisum Sativum
pdb|1EKJ|C Chain C, The X-Ray Crystallographic Structure Of Beta Carbonic
Anhydrase From The C3 Dicot Pisum Sativum
pdb|1EKJ|D Chain D, The X-Ray Crystallographic Structure Of Beta Carbonic
Anhydrase From The C3 Dicot Pisum Sativum
pdb|1EKJ|E Chain E, The X-Ray Crystallographic Structure Of Beta Carbonic
Anhydrase From The C3 Dicot Pisum Sativum
pdb|1EKJ|F Chain F, The X-Ray Crystallographic Structure Of Beta Carbonic
Anhydrase From The C3 Dicot Pisum Sativum
pdb|1EKJ|G Chain G, The X-Ray Crystallographic Structure Of Beta Carbonic
Anhydrase From The C3 Dicot Pisum Sativum
pdb|1EKJ|H Chain H, The X-Ray Crystallographic Structure Of Beta Carbonic
Anhydrase From The C3 Dicot Pisum Sativum
Length = 221
Score = 271 bits (693), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 124/202 (61%), Positives = 156/202 (77%)
Query: 84 ERIIKGFIHFKTSKFDKYPECFSELAKGQHPKFLVFACSDSRVSPSHVLDFQPGEAFMAR 143
ERI GF+HFK K+DK P + ELAKGQ P F+VFACSDSRV PSHVLDFQPGEAF+ R
Sbjct: 15 ERIKTGFLHFKKEKYDKNPALYGELAKGQSPPFMVFACSDSRVCPSHVLDFQPGEAFVVR 74
Query: 144 NIANMVPAFNQLRYSCVGATIEYAVANLQVENVLVIGHSRCGGIKRLMSLPDDGSNYYDF 203
N+AN+VP ++Q +Y+ GA IEYAV +L+V N++VIGHS CGGIK L+S P DG+ DF
Sbjct: 75 NVANLVPPYDQAKYAGTGAAIEYAVLHLKVSNIVVIGHSACGGIKGLLSFPFDGTYSTDF 134
Query: 204 IDDWVRIGLPAKAKVKREHPDLSFEQQTALCERESVNLSLVNLLTYPYVQRAVQDGTLAL 263
I++WV+IGLPAKAKVK +H D F + CE+E+VN SL NLLTYP+V+ + + TLAL
Sbjct: 135 IEEWVKIGLPAKAKVKAQHGDAPFAELCTHCEKEAVNASLGNLLTYPFVREGLVNKTLAL 194
Query: 264 RGGYYDFVNGKFELWELKTDIT 285
+GGYYDFV G FELW L+ ++
Sbjct: 195 KGGYYDFVKGSFELWGLEFGLS 216
>pdb|3E3G|A Chain A, H. Influenzae Beta-Carbonic Anhydrase, Variant G41a
pdb|3E3G|B Chain B, H. Influenzae Beta-Carbonic Anhydrase, Variant G41a
pdb|3E3G|C Chain C, H. Influenzae Beta-Carbonic Anhydrase, Variant G41a
pdb|3E3G|D Chain D, H. Influenzae Beta-Carbonic Anhydrase, Variant G41a
pdb|3E3G|E Chain E, H. Influenzae Beta-Carbonic Anhydrase, Variant G41a
pdb|3E3G|F Chain F, H. Influenzae Beta-Carbonic Anhydrase, Variant G41a
pdb|3E3I|A Chain A, H. Influenzae Beta-Carbonic Anhydrase, Variant G41a With
100 Mm Bicarbonate
pdb|3E3I|B Chain B, H. Influenzae Beta-Carbonic Anhydrase, Variant G41a With
100 Mm Bicarbonate
pdb|3E3I|C Chain C, H. Influenzae Beta-Carbonic Anhydrase, Variant G41a With
100 Mm Bicarbonate
pdb|3E3I|D Chain D, H. Influenzae Beta-Carbonic Anhydrase, Variant G41a With
100 Mm Bicarbonate
pdb|3E3I|E Chain E, H. Influenzae Beta-Carbonic Anhydrase, Variant G41a With
100 Mm Bicarbonate
pdb|3E3I|F Chain F, H. Influenzae Beta-Carbonic Anhydrase, Variant G41a With
100 Mm Bicarbonate
pdb|3E3I|G Chain G, H. Influenzae Beta-Carbonic Anhydrase, Variant G41a With
100 Mm Bicarbonate
pdb|3E3I|H Chain H, H. Influenzae Beta-Carbonic Anhydrase, Variant G41a With
100 Mm Bicarbonate
pdb|3E3I|I Chain I, H. Influenzae Beta-Carbonic Anhydrase, Variant G41a With
100 Mm Bicarbonate
pdb|3E3I|J Chain J, H. Influenzae Beta-Carbonic Anhydrase, Variant G41a With
100 Mm Bicarbonate
pdb|3E3I|K Chain K, H. Influenzae Beta-Carbonic Anhydrase, Variant G41a With
100 Mm Bicarbonate
pdb|3E3I|L Chain L, H. Influenzae Beta-Carbonic Anhydrase, Variant G41a With
100 Mm Bicarbonate
Length = 229
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 93/174 (53%), Gaps = 18/174 (10%)
Query: 105 FSELAKGQHPKFLVFACSDSRVSPSHVLDFQPGEAFMARNIANMVPAFNQLRYSCVGATI 164
F ELA Q P +L ACSDSRV + + +PGE F+ RN+AN V ++C+ + +
Sbjct: 26 FKELADHQTPHYLWIACSDSRVPAEKLTNLEPGELFVHRNVANQVI---HTDFNCL-SVV 81
Query: 165 EYAVANLQVENVLVIGHSRCGGIKRLMSLPDDG--SNYYDFIDD-WVRIG-LPAKAKVKR 220
+YAV L++E++++ GH+ CGGI M+ D G +N+ I D W + G L K
Sbjct: 82 QYAVDVLKIEHIIICGHTNCGGIHAAMADKDLGLINNWLLHIRDIWFKHGHLLGK----- 136
Query: 221 EHPDLSFEQQTALCERESVNLSLVNLLTYPYVQRAVQDGT-LALRGGYYDFVNG 273
LS E++ + + +V + NL V+ A + G L+L G YD +G
Sbjct: 137 ----LSPEKRADMLTKINVAEQVYNLGRTSIVKSAWERGQKLSLHGWVYDVNDG 186
>pdb|3E24|A Chain A, H. Influenzae Beta-Carbonic Anhydrase, Variant W39f
pdb|3E24|B Chain B, H. Influenzae Beta-Carbonic Anhydrase, Variant W39f
Length = 229
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 92/174 (52%), Gaps = 18/174 (10%)
Query: 105 FSELAKGQHPKFLVFACSDSRVSPSHVLDFQPGEAFMARNIANMVPAFNQLRYSCVGATI 164
F ELA Q P +L CSDSRV + + +PGE F+ RN+AN V ++C+ + +
Sbjct: 26 FKELADHQTPHYLFIGCSDSRVPAEKLTNLEPGELFVHRNVANQVI---HTDFNCL-SVV 81
Query: 165 EYAVANLQVENVLVIGHSRCGGIKRLMSLPDDG--SNYYDFIDD-WVRIG-LPAKAKVKR 220
+YAV L++E++++ GH+ CGGI M+ D G +N+ I D W + G L K
Sbjct: 82 QYAVDVLKIEHIIICGHTNCGGIHAAMADKDLGLINNWLLHIRDIWFKHGHLLGK----- 136
Query: 221 EHPDLSFEQQTALCERESVNLSLVNLLTYPYVQRAVQDGT-LALRGGYYDFVNG 273
LS E++ + + +V + NL V+ A + G L+L G YD +G
Sbjct: 137 ----LSPEKRADMLTKINVAEQVYNLGRTSIVKSAWERGQKLSLHGWVYDVNDG 186
>pdb|2A8C|A Chain A, Haemophilus Influenzae Beta-Carbonic Anhydrase
pdb|2A8C|B Chain B, Haemophilus Influenzae Beta-Carbonic Anhydrase
pdb|2A8C|C Chain C, Haemophilus Influenzae Beta-Carbonic Anhydrase
pdb|2A8C|D Chain D, Haemophilus Influenzae Beta-Carbonic Anhydrase
pdb|2A8C|E Chain E, Haemophilus Influenzae Beta-Carbonic Anhydrase
pdb|2A8C|F Chain F, Haemophilus Influenzae Beta-Carbonic Anhydrase
pdb|2A8D|A Chain A, Haemophilus Influenzae Beta-Carbonic Anhydrase Complexed
With Bicarbonate
pdb|2A8D|B Chain B, Haemophilus Influenzae Beta-Carbonic Anhydrase Complexed
With Bicarbonate
pdb|2A8D|C Chain C, Haemophilus Influenzae Beta-Carbonic Anhydrase Complexed
With Bicarbonate
pdb|2A8D|D Chain D, Haemophilus Influenzae Beta-Carbonic Anhydrase Complexed
With Bicarbonate
pdb|2A8D|E Chain E, Haemophilus Influenzae Beta-Carbonic Anhydrase Complexed
With Bicarbonate
pdb|2A8D|F Chain F, Haemophilus Influenzae Beta-Carbonic Anhydrase Complexed
With Bicarbonate
Length = 229
Score = 84.3 bits (207), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 92/174 (52%), Gaps = 18/174 (10%)
Query: 105 FSELAKGQHPKFLVFACSDSRVSPSHVLDFQPGEAFMARNIANMVPAFNQLRYSCVGATI 164
F ELA Q P +L CSDSRV + + +PGE F+ RN+AN V ++C+ + +
Sbjct: 26 FKELADHQTPHYLWIGCSDSRVPAEKLTNLEPGELFVHRNVANQVI---HTDFNCL-SVV 81
Query: 165 EYAVANLQVENVLVIGHSRCGGIKRLMSLPDDG--SNYYDFIDD-WVRIG-LPAKAKVKR 220
+YAV L++E++++ GH+ CGGI M+ D G +N+ I D W + G L K
Sbjct: 82 QYAVDVLKIEHIIICGHTNCGGIHAAMADKDLGLINNWLLHIRDIWFKHGHLLGK----- 136
Query: 221 EHPDLSFEQQTALCERESVNLSLVNLLTYPYVQRAVQDGT-LALRGGYYDFVNG 273
LS E++ + + +V + NL V+ A + G L+L G YD +G
Sbjct: 137 ----LSPEKRADMLTKINVAEQVYNLGRTSIVKSAWERGQKLSLHGWVYDVNDG 186
>pdb|3MF3|A Chain A, Cobalt(Ii)-Substituted Haemophilus Influenzae B-Carbonic
Anhydrase
pdb|3MF3|B Chain B, Cobalt(Ii)-Substituted Haemophilus Influenzae B-Carbonic
Anhydrase
pdb|3MF3|C Chain C, Cobalt(Ii)-Substituted Haemophilus Influenzae B-Carbonic
Anhydrase
pdb|3MF3|D Chain D, Cobalt(Ii)-Substituted Haemophilus Influenzae B-Carbonic
Anhydrase
pdb|3MF3|E Chain E, Cobalt(Ii)-Substituted Haemophilus Influenzae B-Carbonic
Anhydrase
pdb|3MF3|F Chain F, Cobalt(Ii)-Substituted Haemophilus Influenzae B-Carbonic
Anhydrase
Length = 221
Score = 84.0 bits (206), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 92/174 (52%), Gaps = 18/174 (10%)
Query: 105 FSELAKGQHPKFLVFACSDSRVSPSHVLDFQPGEAFMARNIANMVPAFNQLRYSCVGATI 164
F ELA Q P +L CSDSRV + + +PGE F+ RN+AN V ++C+ + +
Sbjct: 26 FKELADHQTPHYLWIGCSDSRVPAEKLTNLEPGELFVHRNVANQVI---HTDFNCL-SVV 81
Query: 165 EYAVANLQVENVLVIGHSRCGGIKRLMSLPDDG--SNYYDFIDD-WVRIG-LPAKAKVKR 220
+YAV L++E++++ GH+ CGGI M+ D G +N+ I D W + G L K
Sbjct: 82 QYAVDVLKIEHIIICGHTNCGGIHAAMADKDLGLINNWLLHIRDIWFKHGHLLGK----- 136
Query: 221 EHPDLSFEQQTALCERESVNLSLVNLLTYPYVQRAVQDGT-LALRGGYYDFVNG 273
LS E++ + + +V + NL V+ A + G L+L G YD +G
Sbjct: 137 ----LSPEKRADMLTKINVAEQVYNLGRTSIVKSAWERGQKLSLHGWVYDVNDG 186
>pdb|3QY1|A Chain A, 1.54a Resolution Crystal Structure Of A Beta-Carbonic
Anhydrase From Salmonella Enterica Subsp. Enterica
Serovar Typhimurium Str. Lt2
pdb|3QY1|B Chain B, 1.54a Resolution Crystal Structure Of A Beta-Carbonic
Anhydrase From Salmonella Enterica Subsp. Enterica
Serovar Typhimurium Str. Lt2
Length = 223
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 66/107 (61%), Gaps = 9/107 (8%)
Query: 102 PECFSELAKGQHPKFLVFACSDSRVSPSHVLDFQPGEAFMARNIANMVPAFNQLRYSCVG 161
P F +LA+ Q P+FL CSDSRV + +PGE F+ RN+AN+V + +C+
Sbjct: 26 PGFFEKLAQAQKPRFLWIGCSDSRVPAERLTGLEPGELFVHRNVANLVIHTD---LNCL- 81
Query: 162 ATIEYAVANLQVENVLVIGHSRCGGIKRLMSLPDDGSNYYDFIDDWV 208
+ ++YAV L+VE++++ GHS CGGIK + P+ G I++W+
Sbjct: 82 SVVQYAVDVLEVEHIIICGHSGCGGIKAAVENPELG-----LINNWL 123
>pdb|3E28|A Chain A, H. Influenzae Beta-carbonic Anhydrase, Variant Y181f
pdb|3E28|B Chain B, H. Influenzae Beta-carbonic Anhydrase, Variant Y181f
pdb|3E28|C Chain C, H. Influenzae Beta-carbonic Anhydrase, Variant Y181f
pdb|3E28|D Chain D, H. Influenzae Beta-carbonic Anhydrase, Variant Y181f
pdb|3E28|E Chain E, H. Influenzae Beta-carbonic Anhydrase, Variant Y181f
pdb|3E28|F Chain F, H. Influenzae Beta-carbonic Anhydrase, Variant Y181f
pdb|3E2A|A Chain A, H. Influenzae Beta-Carbonic Anhydrase, Variant Y181f With
100 Mm Bicarbonate
pdb|3E2A|B Chain B, H. Influenzae Beta-Carbonic Anhydrase, Variant Y181f With
100 Mm Bicarbonate
pdb|3E2A|C Chain C, H. Influenzae Beta-Carbonic Anhydrase, Variant Y181f With
100 Mm Bicarbonate
pdb|3E2A|D Chain D, H. Influenzae Beta-Carbonic Anhydrase, Variant Y181f With
100 Mm Bicarbonate
pdb|3E2A|E Chain E, H. Influenzae Beta-Carbonic Anhydrase, Variant Y181f With
100 Mm Bicarbonate
pdb|3E2A|F Chain F, H. Influenzae Beta-Carbonic Anhydrase, Variant Y181f With
100 Mm Bicarbonate
pdb|3E2W|A Chain A, H. Influenzae Beta-Carbonic Anhydrase, Variant Y181f With
1m Bicarbonate
pdb|3E2W|B Chain B, H. Influenzae Beta-Carbonic Anhydrase, Variant Y181f With
1m Bicarbonate
pdb|3E2W|C Chain C, H. Influenzae Beta-Carbonic Anhydrase, Variant Y181f With
1m Bicarbonate
pdb|3E2W|D Chain D, H. Influenzae Beta-Carbonic Anhydrase, Variant Y181f With
1m Bicarbonate
pdb|3E2W|E Chain E, H. Influenzae Beta-Carbonic Anhydrase, Variant Y181f With
1m Bicarbonate
pdb|3E2W|F Chain F, H. Influenzae Beta-Carbonic Anhydrase, Variant Y181f With
1m Bicarbonate
Length = 229
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 92/174 (52%), Gaps = 18/174 (10%)
Query: 105 FSELAKGQHPKFLVFACSDSRVSPSHVLDFQPGEAFMARNIANMVPAFNQLRYSCVGATI 164
F ELA Q P +L CSDSRV + + +PGE F+ RN+AN V ++C+ + +
Sbjct: 26 FKELADHQTPHYLWIGCSDSRVPAEKLTNLEPGELFVHRNVANQVI---HTDFNCL-SVV 81
Query: 165 EYAVANLQVENVLVIGHSRCGGIKRLMSLPDDG--SNYYDFIDD-WVRIG-LPAKAKVKR 220
+YAV L++E++++ GH+ CGGI M+ D G +N+ I D W + G L K
Sbjct: 82 QYAVDVLKIEHIIICGHTNCGGIHAAMADKDLGLINNWLLHIRDIWFKHGHLLGK----- 136
Query: 221 EHPDLSFEQQTALCERESVNLSLVNLLTYPYVQRAVQDGT-LALRGGYYDFVNG 273
LS E++ + + +V + NL V+ A + G L+L G +D +G
Sbjct: 137 ----LSPEKRADMLTKINVAEQVYNLGRTSIVKSAWERGQKLSLHGWVFDVNDG 186
>pdb|3E2X|A Chain A, H. Influenzae Beta-Carbonic Anhydrase, Variant V47a
pdb|3E2X|B Chain B, H. Influenzae Beta-Carbonic Anhydrase, Variant V47a
pdb|3E31|A Chain A, H. Influenzae Beta-Carbonic Anhydrase, Variant V47a
pdb|3E31|B Chain B, H. Influenzae Beta-Carbonic Anhydrase, Variant V47a
pdb|3E3F|A Chain A, H. Influenzae Beta-carbonic Anhydrase, Variant V47a With
100 Mm Bicarbonate
pdb|3E3F|B Chain B, H. Influenzae Beta-carbonic Anhydrase, Variant V47a With
100 Mm Bicarbonate
Length = 229
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 91/174 (52%), Gaps = 18/174 (10%)
Query: 105 FSELAKGQHPKFLVFACSDSRVSPSHVLDFQPGEAFMARNIANMVPAFNQLRYSCVGATI 164
F ELA Q P +L CSDSR + + +PGE F+ RN+AN V ++C+ + +
Sbjct: 26 FKELADHQTPHYLWIGCSDSRAPAEKLTNLEPGELFVHRNVANQVI---HTDFNCL-SVV 81
Query: 165 EYAVANLQVENVLVIGHSRCGGIKRLMSLPDDG--SNYYDFIDD-WVRIG-LPAKAKVKR 220
+YAV L++E++++ GH+ CGGI M+ D G +N+ I D W + G L K
Sbjct: 82 QYAVDVLKIEHIIICGHTNCGGIHAAMADKDLGLINNWLLHIRDIWFKHGHLLGK----- 136
Query: 221 EHPDLSFEQQTALCERESVNLSLVNLLTYPYVQRAVQDGT-LALRGGYYDFVNG 273
LS E++ + + +V + NL V+ A + G L+L G YD +G
Sbjct: 137 ----LSPEKRADMLTKINVAEQVYNLGRTSIVKSAWERGQKLSLHGWVYDVNDG 186
>pdb|3E1V|A Chain A, H. Influenzae Beta-Carbonic Anhydrase, Variant D44n
pdb|3E1V|B Chain B, H. Influenzae Beta-Carbonic Anhydrase, Variant D44n
pdb|3E1W|A Chain A, H. Influenzae Beta-carbonic Anhydrase, Variant D44n In 100
Mm Sodium Bicarbonate
pdb|3E1W|B Chain B, H. Influenzae Beta-carbonic Anhydrase, Variant D44n In 100
Mm Sodium Bicarbonate
Length = 229
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 92/174 (52%), Gaps = 18/174 (10%)
Query: 105 FSELAKGQHPKFLVFACSDSRVSPSHVLDFQPGEAFMARNIANMVPAFNQLRYSCVGATI 164
F ELA Q P +L CS+SRV + + +PGE F+ RN+AN V ++C+ + +
Sbjct: 26 FKELADHQTPHYLWIGCSNSRVPAEKLTNLEPGELFVHRNVANQVI---HTDFNCL-SVV 81
Query: 165 EYAVANLQVENVLVIGHSRCGGIKRLMSLPDDG--SNYYDFIDD-WVRIG-LPAKAKVKR 220
+YAV L++E++++ GH+ CGGI M+ D G +N+ I D W + G L K
Sbjct: 82 QYAVDVLKIEHIIICGHTNCGGIHAAMADKDLGLINNWLLHIRDIWFKHGHLLGK----- 136
Query: 221 EHPDLSFEQQTALCERESVNLSLVNLLTYPYVQRAVQDGT-LALRGGYYDFVNG 273
LS E++ + + +V + NL V+ A + G L+L G YD +G
Sbjct: 137 ----LSPEKRADMLTKINVAEQVYNLGRTSIVKSAWERGQKLSLHGWVYDVNDG 186
>pdb|1DDZ|A Chain A, X-Ray Structure Of A Beta-Carbonic Anhydrase From The Red
Alga, Porphyridium Purpureum R-1
pdb|1DDZ|B Chain B, X-Ray Structure Of A Beta-Carbonic Anhydrase From The Red
Alga, Porphyridium Purpureum R-1
Length = 496
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 67/119 (56%), Gaps = 13/119 (10%)
Query: 93 FKTSKFDKYPECFSELAKGQHPKFLVFACSDSRVSPSHVLDFQPGEAFMARNIANMVPAF 152
++ + PE F+ LA GQ P++L C+DSRV + +LD GE F+ RNIA
Sbjct: 46 WRQEMLKQDPEFFNRLANGQSPEYLWIGCADSRVPANQLLDLPAGEVFVHRNIA------ 99
Query: 153 NQLRYSCVG--ATIEYAVANLQVENVLVIGHSRCGGIKRLMSLPDDGSNYYDFIDDWVR 209
NQ +S + + ++YAV L+V+++LV GH CGG K + G + ID+W+R
Sbjct: 100 NQCIHSDISFLSVLQYAVQYLKVKHILVCGHYGCGGAKAAL-----GDSRLGLIDNWLR 153
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 61/118 (51%), Gaps = 9/118 (7%)
Query: 92 HFKTSKFDKYPECFSELAKGQHPKFLVFACSDSRVSPSHVLDFQPGEAFMARNIANMVPA 151
+++ + P+ FS LA Q P+ L C+DSRV + +++ GE F+ RNIAN
Sbjct: 299 NWRQKMLKQDPQFFSNLAHTQTPEILWIGCADSRVPANQIINLPAGEVFVHRNIANQCIH 358
Query: 152 FNQLRYSCVGATIEYAVANLQVENVLVIGHSRCGGIKRLMSLPDDGSNYYDFIDDWVR 209
+ S ++YAV L+V+ V+V GH CGG + G + ID+W+R
Sbjct: 359 SDMSFLS----VLQYAVQYLKVKRVVVCGHYACGGCAAAL-----GDSRLGLIDNWLR 407
>pdb|1I6P|A Chain A, Crystal Structure Of E. Coli Beta Carbonic Anhydrase
(Ecca)
pdb|1T75|A Chain A, Crystal Structure Of Escherichia Coli Beta Carbonic
Anhydrase
pdb|1T75|B Chain B, Crystal Structure Of Escherichia Coli Beta Carbonic
Anhydrase
pdb|1T75|D Chain D, Crystal Structure Of Escherichia Coli Beta Carbonic
Anhydrase
pdb|1T75|E Chain E, Crystal Structure Of Escherichia Coli Beta Carbonic
Anhydrase
pdb|2ESF|A Chain A, Identification Of A Novel Non-catalytic Bicarbonate
Binding Site In Eubacterial Beta-carbonic Anhydrase
pdb|2ESF|B Chain B, Identification Of A Novel Non-catalytic Bicarbonate
Binding Site In Eubacterial Beta-carbonic Anhydrase
Length = 220
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 65/107 (60%), Gaps = 9/107 (8%)
Query: 102 PECFSELAKGQHPKFLVFACSDSRVSPSHVLDFQPGEAFMARNIANMVPAFNQLRYSCVG 161
P F +LA+ Q P+FL CSDSRV + +PGE F+ RN+AN+V + +C+
Sbjct: 23 PGFFEKLAQAQKPRFLWIGCSDSRVPAERLTGLEPGELFVHRNVANLVIHTD---LNCL- 78
Query: 162 ATIEYAVANLQVENVLVIGHSRCGGIKRLMSLPDDGSNYYDFIDDWV 208
+ ++YAV L+VE++++ GH CGG++ + P+ G I++W+
Sbjct: 79 SVVQYAVDVLEVEHIIICGHYGCGGVQAAVENPELG-----LINNWL 120
>pdb|1I6O|A Chain A, Crystal Structure Of E. Coli Beta Carbonic Anhydrase
(Ecca)
pdb|1I6O|B Chain B, Crystal Structure Of E. Coli Beta Carbonic Anhydrase
(Ecca)
Length = 220
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 65/107 (60%), Gaps = 9/107 (8%)
Query: 102 PECFSELAKGQHPKFLVFACSDSRVSPSHVLDFQPGEAFMARNIANMVPAFNQLRYSCVG 161
P F +LA+ Q P+FL CSDSRV + +PGE F+ RN+AN+V + +C+
Sbjct: 23 PGFFEKLAQAQKPRFLWIGCSDSRVPAERLTGLEPGELFVHRNVANLVIHTD---LNCL- 78
Query: 162 ATIEYAVANLQVENVLVIGHSRCGGIKRLMSLPDDGSNYYDFIDDWV 208
+ ++YAV L+VE++++ GH CGG++ + P+ G I++W+
Sbjct: 79 SVVQYAVDVLEVEHIIICGHYGCGGVQAAVENPELG-----LINNWL 120
>pdb|3UCJ|A Chain A, Coccomyxa Beta-Carbonic Anhydrase In Complex With
Acetazolamide
pdb|3UCJ|B Chain B, Coccomyxa Beta-Carbonic Anhydrase In Complex With
Acetazolamide
pdb|3UCK|A Chain A, Coccomyxa Beta-Carbonic Anhydrase In Complex With
Phosphate
pdb|3UCK|B Chain B, Coccomyxa Beta-Carbonic Anhydrase In Complex With
Phosphate
pdb|3UCM|A Chain A, Coccomyxa Beta-Carbonic Anhydrase In Complex With
Thiocyanate
pdb|3UCM|B Chain B, Coccomyxa Beta-Carbonic Anhydrase In Complex With
Thiocyanate
pdb|3UCN|A Chain A, Coccomyxa Beta-Carbonic Anhydrase In Complex With Azide
pdb|3UCN|B Chain B, Coccomyxa Beta-Carbonic Anhydrase In Complex With Azide
pdb|3UCO|A Chain A, Coccomyxa Beta-Carbonic Anhydrase In Complex With Iodide
pdb|3UCO|B Chain B, Coccomyxa Beta-Carbonic Anhydrase In Complex With Iodide
Length = 227
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 84/166 (50%), Gaps = 10/166 (6%)
Query: 105 FSELAKGQHPKFLVFACSDSRVSPSHVLDFQPGEAFMARNIANMVPAFNQLRYSCVGATI 164
FS++A Q P++L C+DSRVSP+ + + PGE F+ RN+ N+V + SC +
Sbjct: 31 FSKVAGSQAPEYLYIGCADSRVSPAQLFNMAPGEVFVQRNVGNLVSNKDLNCMSC----L 86
Query: 165 EYAVANLQVENVLVIGHSRCGGIKR-LMSLPDDGSNYYDFIDDWVRIGLPAKAKVKREHP 223
EY V +L+++++LV GH CG K L+ P +I D + AK+
Sbjct: 87 EYTVDHLKIKHILVCGHYNCGACKAGLVWHPKTAGVTNLWISDVREVRDKNAAKLHGLSA 146
Query: 224 DLSFEQQTALCERESVNLSLVNLLTYPYVQRAVQDGT-LALRGGYY 268
D ++++ L +V + N+ P VQ A G L++ G Y
Sbjct: 147 DDAWDKMVEL----NVEAQVFNVCASPIVQAAWARGQPLSVHGIVY 188
>pdb|3EYX|A Chain A, Crystal Structure Of Carbonic Anhydrase Nce103 From
Saccharomyces Cerevisiae
pdb|3EYX|B Chain B, Crystal Structure Of Carbonic Anhydrase Nce103 From
Saccharomyces Cerevisiae
Length = 216
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 91/188 (48%), Gaps = 22/188 (11%)
Query: 109 AKGQHPKFLVFACSDSRVSPSHVLDFQPGEAFMARNIANMVPAFNQLRYSCVGATIEYAV 168
AKGQ P L CSDSR + + L PGE F +N+AN+ + + + AT+E+A+
Sbjct: 40 AKGQSPHTLFIGCSDSRYNEN-CLGVLPGEVFTWKNVANICHSEDLT----LKATLEFAI 94
Query: 169 ANLQVENVLVIGHSRCGGIKRLMS-----LPD-DGSNYYDFIDDWVRIGLPAKAKVKREH 222
L+V V++ GH+ CGGIK ++ LP + S+ Y ++DD E
Sbjct: 95 ICLKVNKVIICGHTDCGGIKTCLTNQREALPKVNCSHLYKYLDD-------IDTMYHEES 147
Query: 223 PDL----SFEQQTALCERESVNLSLVNLLTYPYVQRAVQDGTLALRGGYYDFVNGKFELW 278
+L + +++ +V ++ P VQ AVQ+G L + G Y+ +G +
Sbjct: 148 QNLIHLKTQREKSHYLSHCNVKRQFNRIIENPTVQTAVQNGELQVYGLLYNVEDGLLQTV 207
Query: 279 ELKTDITP 286
T +TP
Sbjct: 208 STYTKVTP 215
>pdb|2W3Q|A Chain A, Structure And Inhibition Of The Co2-Sensing Carbonic
Anhydrase Can2 From The Pathogenic Fungus Cryptococcus
Neoformans
Length = 243
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 94/210 (44%), Gaps = 31/210 (14%)
Query: 80 FDPVERIIKGFIHFKTSKFDKYPECFSELAKGQHPKFLVFACSDSRVSPSHVLDFQPGEA 139
F + +++G ++ + PE +E KGQ P FL C+DSRV ++ +PG+
Sbjct: 31 FKEIREVLEGNRYWARKVTSEEPEFMAEQVKGQAPNFLWIGCADSRVPEVTIMARKPGDV 90
Query: 140 FMARNIANMVPAFNQLRYSCVGATIEYAVANLQVENVLVIGHSRCGGIKRLMSLP----- 194
F+ RN+AN + A + YA+ N+ V +V+V+GH+ CGG P
Sbjct: 91 FVQRNVANQF----KPEDDSSQALLNYAIMNVGVTHVMVVGHTGCGGCIAAFDQPLPTEE 146
Query: 195 -DDGSNYYDFIDDWVRI--GLPAKAKVKREHPDLSFEQQTALCERESVNLSLVNLLTYPY 251
G+ +++ +R+ LP + V DL +E+V +++ N++ P
Sbjct: 147 NPGGTPLVRYLEPIIRLKHSLPEGSDVN----DLI---------KENVKMAVKNVVNSPT 193
Query: 252 VQRAVQDG------TLALRGGYYDFVNGKF 275
+Q A + + + G YD G
Sbjct: 194 IQGAWEQARKGEFREVFVHGWLYDLSTGNI 223
>pdb|2W3N|A Chain A, Structure And Inhibition Of The Co2-Sensing Carbonic
Anhydrase Can2 From The Pathogenic Fungus Cryptococcus
Neoformans
pdb|2W3N|B Chain B, Structure And Inhibition Of The Co2-Sensing Carbonic
Anhydrase Can2 From The Pathogenic Fungus Cryptococcus
Neoformans
pdb|2W3N|C Chain C, Structure And Inhibition Of The Co2-Sensing Carbonic
Anhydrase Can2 From The Pathogenic Fungus Cryptococcus
Neoformans
Length = 239
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 94/210 (44%), Gaps = 31/210 (14%)
Query: 80 FDPVERIIKGFIHFKTSKFDKYPECFSELAKGQHPKFLVFACSDSRVSPSHVLDFQPGEA 139
F + +++G ++ + PE +E KGQ P FL C+DSRV ++ +PG+
Sbjct: 27 FKEIREVLEGNRYWARKVTSEEPEFMAEQVKGQAPNFLWIGCADSRVPEVTIMARKPGDV 86
Query: 140 FMARNIANMVPAFNQLRYSCVGATIEYAVANLQVENVLVIGHSRCGGIKRLMSLP----- 194
F+ RN+AN + A + YA+ N+ V +V+V+GH+ CGG P
Sbjct: 87 FVQRNVANQF----KPEDDSSQALLNYAIMNVGVTHVMVVGHTGCGGCIAAFDQPLPTEE 142
Query: 195 -DDGSNYYDFIDDWVRI--GLPAKAKVKREHPDLSFEQQTALCERESVNLSLVNLLTYPY 251
G+ +++ +R+ LP + V DL +E+V +++ N++ P
Sbjct: 143 NPGGTPLVRYLEPIIRLKHSLPEGSDVN----DLI---------KENVKMAVKNVVNSPT 189
Query: 252 VQRAVQDG------TLALRGGYYDFVNGKF 275
+Q A + + + G YD G
Sbjct: 190 IQGAWEQARKGEFREVFVHGWLYDLSTGNI 219
>pdb|1YM3|A Chain A, Crystal Structure Of Carbonic Anhydrase Rv3588c From
Mycobacterium Tuberculosis
Length = 215
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 27/200 (13%)
Query: 84 ERIIKGFIHFKTSKFDKYPECFSELAKGQHPKFLVFACSDSRVSPSHVLDFQPGEAFMAR 143
ER + G + D + LA GQ P ++F C+DSRV+ + D G+ F+ R
Sbjct: 26 ERFVAGRPQHPSQSVDHR----AGLAAGQKPTAVIFGCADSRVAAEIIFDQGLGDMFVVR 81
Query: 144 NIANMVPAFNQLRYSCVGATIEYAVANLQVENVLVIGHSRCGGIKRLMSLPDDGSNYYDF 203
+++ S V +IEYAV L V ++V+GH CG + ++ +DG+ +
Sbjct: 82 TAGHVID-------SAVLGSIEYAVTVLNVPLIVVLGHDSCGAVNAALAAINDGTLPGGY 134
Query: 204 IDDWVRIGLPAKAKVKREHPDLSFEQQTALC-----ERESVNLSLVNLLT-YPYVQRAVQ 257
+ D V+R P + ++ L E+ V+ ++ L+ + +
Sbjct: 135 VRDV----------VERVAPSVLLGRRDGLSRVDEFEQRHVHETVAILMARSSAISERIA 184
Query: 258 DGTLALRGGYYDFVNGKFEL 277
G+LA+ G Y +G+ L
Sbjct: 185 GGSLAIVGVTYQLDDGRAVL 204
>pdb|2A5V|A Chain A, Crystal Structure Of M. Tuberculosis Beta Carbonic
Anhydrase, Rv3588c, Tetrameric Form
pdb|2A5V|B Chain B, Crystal Structure Of M. Tuberculosis Beta Carbonic
Anhydrase, Rv3588c, Tetrameric Form
pdb|2A5V|C Chain C, Crystal Structure Of M. Tuberculosis Beta Carbonic
Anhydrase, Rv3588c, Tetrameric Form
pdb|2A5V|D Chain D, Crystal Structure Of M. Tuberculosis Beta Carbonic
Anhydrase, Rv3588c, Tetrameric Form
Length = 213
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 27/200 (13%)
Query: 84 ERIIKGFIHFKTSKFDKYPECFSELAKGQHPKFLVFACSDSRVSPSHVLDFQPGEAFMAR 143
ER + G + D + LA GQ P ++F C+DSRV+ + D G+ F+ R
Sbjct: 24 ERFVAGRPQHPSQSVDHR----AGLAAGQKPTAVIFGCADSRVAAEIIFDQGLGDMFVVR 79
Query: 144 NIANMVPAFNQLRYSCVGATIEYAVANLQVENVLVIGHSRCGGIKRLMSLPDDGSNYYDF 203
+++ S V +IEYAV L V ++V+GH CG + ++ +DG+ +
Sbjct: 80 TAGHVID-------SAVLGSIEYAVTVLNVPLIVVLGHDSCGAVNAALAAINDGTLPGGY 132
Query: 204 IDDWVRIGLPAKAKVKREHPDLSFEQQTALC-----ERESVNLSLVNLLT-YPYVQRAVQ 257
+ D V+R P + ++ L E+ V+ ++ L+ + +
Sbjct: 133 VRDV----------VERVAPSVLLGRRDGLSRVDEFEQRHVHETVAILMARSSAISERIA 182
Query: 258 DGTLALRGGYYDFVNGKFEL 277
G+LA+ G Y +G+ L
Sbjct: 183 GGSLAIVGVTYQLDDGRAVL 202
>pdb|3VQJ|A Chain A, Crystal Structutre Of Thiobacillus Thioparus Thi115
Carbonyl Sulfide Hydrolase
pdb|3VRK|A Chain A, Crystal Structutre Of Thiobacillus Thioparus Thi115
Carbonyl Sulfide Hydrolase / Thiocyanate Complex
Length = 219
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 76/192 (39%), Gaps = 52/192 (27%)
Query: 115 KFLVFACSDSRVSPSHVLDFQPGEAFMARNIANMVPAFNQLRYSCVGATIEYAVANLQVE 174
+ V AC D+R+ +L Q GEA + RN ++ N+ C+ I + + L
Sbjct: 38 RVAVVACMDARLDVEDLLGLQTGEAHIIRNAGGVI---NEDAIRCL--IISHHL--LNTH 90
Query: 175 NVLVIGHSRCGGIKRLMSLPDDGSNYYDFIDDWVRIGL---------------------- 212
++++ H+RCG + F DD +R GL
Sbjct: 91 EIILVHHTRCGMLA--------------FTDDLLRAGLEGDAAAEKLIGQATGRAFVSAG 136
Query: 213 -----PAKAKVKREHPD-LSFEQQTALCERESVNL--SLVNLLTYPYVQRAVQDGTLALR 264
PA + R P+ L + A ER + ++ L +L +P++ A D + +R
Sbjct: 137 KASASPAAFQAFRGPPEPLDAPRSDASTERIAADVRRGLSIILNHPWLPTAGPD-AITVR 195
Query: 265 GGYYDFVNGKFE 276
G YD G+ E
Sbjct: 196 GFIYDVDTGRLE 207
>pdb|1G5C|A Chain A, Crystal Structure Of The 'cab' Type Beta Class Carbonic
Anhydrase From Methanobacterium Thermoautotrophicum
pdb|1G5C|B Chain B, Crystal Structure Of The 'cab' Type Beta Class Carbonic
Anhydrase From Methanobacterium Thermoautotrophicum
pdb|1G5C|C Chain C, Crystal Structure Of The 'cab' Type Beta Class Carbonic
Anhydrase From Methanobacterium Thermoautotrophicum
pdb|1G5C|D Chain D, Crystal Structure Of The 'cab' Type Beta Class Carbonic
Anhydrase From Methanobacterium Thermoautotrophicum
pdb|1G5C|E Chain E, Crystal Structure Of The 'cab' Type Beta Class Carbonic
Anhydrase From Methanobacterium Thermoautotrophicum
pdb|1G5C|F Chain F, Crystal Structure Of The 'cab' Type Beta Class Carbonic
Anhydrase From Methanobacterium Thermoautotrophicum
Length = 170
Score = 34.7 bits (78), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 10/84 (11%)
Query: 105 FSELAKGQH-PKFLVFACSDSRVSP--SHVLDFQPGEAFMARNIANMVPAFNQLRYSCVG 161
F +L+ +H PK + C DSR+ L G+A + +N N+V +R + V
Sbjct: 15 FRDLSDLKHSPKLCIITCMDSRLIDLLERALGIGRGDAKVIKNAGNIVDD-GVIRSAAVA 73
Query: 162 ATIEYAVANLQVENVLVIGHSRCG 185
YA+ + ++++GH+ CG
Sbjct: 74 I---YALGD---NEIIIVGHTDCG 91
>pdb|3TEO|A Chain A, Apo Form Of Carbon Disulfide Hydrolase (Selenomethionine
Form)
pdb|3TEO|B Chain B, Apo Form Of Carbon Disulfide Hydrolase (Selenomethionine
Form)
pdb|3TEO|C Chain C, Apo Form Of Carbon Disulfide Hydrolase (Selenomethionine
Form)
pdb|3TEO|D Chain D, Apo Form Of Carbon Disulfide Hydrolase (Selenomethionine
Form)
pdb|3TEO|E Chain E, Apo Form Of Carbon Disulfide Hydrolase (Selenomethionine
Form)
pdb|3TEO|F Chain F, Apo Form Of Carbon Disulfide Hydrolase (Selenomethionine
Form)
pdb|3TEO|G Chain G, Apo Form Of Carbon Disulfide Hydrolase (Selenomethionine
Form)
pdb|3TEO|H Chain H, Apo Form Of Carbon Disulfide Hydrolase (Selenomethionine
Form)
pdb|3TEO|I Chain I, Apo Form Of Carbon Disulfide Hydrolase (Selenomethionine
Form)
pdb|3TEO|J Chain J, Apo Form Of Carbon Disulfide Hydrolase (Selenomethionine
Form)
pdb|3TEO|K Chain K, Apo Form Of Carbon Disulfide Hydrolase (Selenomethionine
Form)
pdb|3TEO|L Chain L, Apo Form Of Carbon Disulfide Hydrolase (Selenomethionine
Form)
pdb|3TEO|M Chain M, Apo Form Of Carbon Disulfide Hydrolase (Selenomethionine
Form)
pdb|3TEO|N Chain N, Apo Form Of Carbon Disulfide Hydrolase (Selenomethionine
Form)
pdb|3TEO|O Chain O, Apo Form Of Carbon Disulfide Hydrolase (Selenomethionine
Form)
pdb|3TEO|P Chain P, Apo Form Of Carbon Disulfide Hydrolase (Selenomethionine
Form)
Length = 204
Score = 32.7 bits (73), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/74 (22%), Positives = 32/74 (43%), Gaps = 7/74 (9%)
Query: 115 KFLVFACSDSRVSPSHVLDFQPGEAFMARNIANMVPAFNQLRYSCVGATIEYAVANLQVE 174
+ V C D RV L QP +A + RN +V + +R + + +
Sbjct: 29 RLWVLTCXDERVHIEQSLGIQPDDAHIYRNAGGIVTD-DAIRSASLTTNF------FGTK 81
Query: 175 NVLVIGHSRCGGIK 188
++V+ H+ CG ++
Sbjct: 82 EIIVVTHTDCGXLR 95
>pdb|3UOM|A Chain A, Ca2+ Complex Of Human Skeletal Calsequestrin
pdb|3UOM|B Chain B, Ca2+ Complex Of Human Skeletal Calsequestrin
pdb|3UOM|C Chain C, Ca2+ Complex Of Human Skeletal Calsequestrin
pdb|3UOM|D Chain D, Ca2+ Complex Of Human Skeletal Calsequestrin
pdb|3UOM|E Chain E, Ca2+ Complex Of Human Skeletal Calsequestrin
pdb|3UOM|F Chain F, Ca2+ Complex Of Human Skeletal Calsequestrin
Length = 362
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 65/156 (41%), Gaps = 18/156 (11%)
Query: 79 CFDPVERIIKGFIHFKTSKFDKYPECFSELAKGQHPKFLVFACSDSRVSPSHVL-----D 133
F+ +E IK +FK+ + Y + F + A+ HP FA DS+V+ L D
Sbjct: 138 AFENIEDEIKLIGYFKSKDSEHY-KAFEDAAEEFHPYIPFFATFDSKVAKKLTLKLNEID 196
Query: 134 FQPGEAFMARNIANMVPAFNQLRYSCVGATIEY---AVANLQVENVLVIGHSRCGGIKRL 190
F EAFM + +P V E+ + L+ E++ GI +
Sbjct: 197 FY--EAFMEEPVT--IPDKPNSEEEIVNFVEEHRRSTLRKLKPESMYETWEDDMDGIHIV 252
Query: 191 MSLPDDGSNYYDFIDDWVRIGLPAKAKVKREHPDLS 226
+ + ++F++ L A A+ E+PDLS
Sbjct: 253 AFAEEADPDGFEFLE-----TLKAVAQDNTENPDLS 283
>pdb|1YLK|A Chain A, Crystal Structure Of Rv1284 From Mycobacterium
Tuberculosis In Complex With Thiocyanate
pdb|1YLK|B Chain B, Crystal Structure Of Rv1284 From Mycobacterium
Tuberculosis In Complex With Thiocyanate
pdb|1YLK|C Chain C, Crystal Structure Of Rv1284 From Mycobacterium
Tuberculosis In Complex With Thiocyanate
pdb|1YLK|D Chain D, Crystal Structure Of Rv1284 From Mycobacterium
Tuberculosis In Complex With Thiocyanate
Length = 172
Score = 29.6 bits (65), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 33/158 (20%), Positives = 60/158 (37%), Gaps = 31/158 (19%)
Query: 118 VFACSDSRVSPSHVLDFQPGEAFMARNIANMVPAFNQLRYSCVGATIEYAVANLQVENVL 177
+ AC D+R+ +L + GEA + RN A V + +R + + L ++
Sbjct: 41 IVACMDARLDVYRMLGIKEGEAHVIRN-AGCVVTDDVIRSLAISQRL------LGTREII 93
Query: 178 VIGHSRCGGIKRLMSLPDDGSNYYDFIDDWVRIGLPAKAKVKREHPDLSFEQQTALCERE 237
++ H+ CG + F DD + + + ++ S+ E
Sbjct: 94 LLHHTDCGMLT--------------FTDDDFKRAIQDETGIRPTWSPESYPDAV-----E 134
Query: 238 SVNLSLVNLLTYPYVQRAVQDGTLALRGGYYDFVNGKF 275
V SL + P+V + +LRG +D GK
Sbjct: 135 DVRQSLRRIEVNPFVTKHT-----SLRGFVFDVATGKL 167
>pdb|1A8Y|A Chain A, Crystal Structure Of Calsequestrin From Rabbit Skeletal
Muscle Sarcoplasmic Reticulum At 2.4 A Resolution
pdb|3US3|A Chain A, Recombinant Rabbit Skeletal Calsequestrin-Mpd Complex
pdb|3V1W|A Chain A, Molecular Basis For Multiple Ligand Binding Of
Calsequestrin And Potential Inhibition By Caffeine And
Gallocatecin
Length = 367
Score = 29.3 bits (64), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 64/156 (41%), Gaps = 18/156 (11%)
Query: 79 CFDPVERIIKGFIHFKTSKFDKYPECFSELAKGQHPKFLVFACSDSRVSPSHVL-----D 133
F+ +E IK +FK + Y + F E A+ HP FA DS+V+ L D
Sbjct: 138 AFENIEDEIKLIGYFKNKDSEHY-KAFKEAAEEFHPYIPFFATFDSKVAKKLTLKLNEID 196
Query: 134 FQPGEAFMARNIANMVPAFNQLRYSCVGATIEY---AVANLQVENVLVIGHSRCGGIKRL 190
F EAFM + +P V E+ + L+ E++ GI +
Sbjct: 197 FY--EAFMEEPVT--IPDKPNSEEEIVNFVEEHRRSTLRKLKPESMYETWEDDMDGIHIV 252
Query: 191 MSLPDDGSNYYDFIDDWVRIGLPAKAKVKREHPDLS 226
+ + Y+F++ L + A+ ++PDLS
Sbjct: 253 AFAEEADPDGYEFLE-----ILKSVAQDNTDNPDLS 283
>pdb|3TRQ|A Chain A, Crystal Structure Of Native Rabbit Skeletal Calsequestrin
pdb|3TRP|A Chain A, Crystal Structure Of Recombinant Rabbit Skeletal
Calsequestrin
Length = 353
Score = 29.3 bits (64), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 64/156 (41%), Gaps = 18/156 (11%)
Query: 79 CFDPVERIIKGFIHFKTSKFDKYPECFSELAKGQHPKFLVFACSDSRVSPSHVL-----D 133
F+ +E IK +FK + Y + F E A+ HP FA DS+V+ L D
Sbjct: 138 AFENIEDEIKLIGYFKNKDSEHY-KAFKEAAEEFHPYIPFFATFDSKVAKKLTLKLNEID 196
Query: 134 FQPGEAFMARNIANMVPAFNQLRYSCVGATIEY---AVANLQVENVLVIGHSRCGGIKRL 190
F EAFM + +P V E+ + L+ E++ GI +
Sbjct: 197 FY--EAFMEEPVT--IPDKPNSEEEIVNFVEEHRRSTLRKLKPESMYETWEDDMDGIHIV 252
Query: 191 MSLPDDGSNYYDFIDDWVRIGLPAKAKVKREHPDLS 226
+ + Y+F++ L + A+ ++PDLS
Sbjct: 253 AFAEEADPDGYEFLE-----ILKSVAQDNTDNPDLS 283
>pdb|2OW4|A Chain A, Crystal Structure Of A Lectin From Canavalia Maritima
Seeds (Conm) In Complex With Man1-2man-Ome
Length = 237
Score = 29.3 bits (64), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 58/131 (44%), Gaps = 9/131 (6%)
Query: 163 TIEYAVANLQVENVLVIGHSRCGGIKRLMSLP--DDGSNYYDF-----IDDWVRIGLPAK 215
T ++ + N +V +I +S + ++S P D + YD + +WVR+GL A
Sbjct: 37 TAKWNMQNGKVGTAHIIYNSVGKRLSAVVSYPNGDSATVSYDVDLDNVLPEWVRVGLSAS 96
Query: 216 AKVKREHPDLSFEQQTALCERESVNLSLVNLLTYPYVQRAVQDGTLALRGGYYDFVNGKF 275
+ +E + T+ + S + + N L + + Q + L L+G +G
Sbjct: 97 TGLYKETNTILSWSFTSKLKSNSTHET--NALHFSFNQFSKDQKDLILQGDATTGTDGNL 154
Query: 276 ELWELKTDITP 286
EL + ++ +P
Sbjct: 155 ELTRVSSNGSP 165
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.138 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,539,356
Number of Sequences: 62578
Number of extensions: 331298
Number of successful extensions: 796
Number of sequences better than 100.0: 28
Number of HSP's better than 100.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 756
Number of HSP's gapped (non-prelim): 29
length of query: 290
length of database: 14,973,337
effective HSP length: 98
effective length of query: 192
effective length of database: 8,840,693
effective search space: 1697413056
effective search space used: 1697413056
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (24.3 bits)