Query 045793
Match_columns 101
No_of_seqs 123 out of 628
Neff 4.7
Searched_HMMs 29240
Date Mon Mar 25 09:22:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045793.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045793hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3drz_A BTB/POZ domain-containi 86.0 4.3 0.00015 26.3 7.3 60 25-88 6-72 (107)
2 2vkp_A BTB/POZ domain-containi 81.7 6.7 0.00023 24.2 6.6 60 27-90 11-76 (109)
3 2vpk_A Myoneurin; transcriptio 81.2 5.6 0.00019 25.0 6.2 62 27-98 25-93 (116)
4 1s1g_A Potassium voltage-gated 78.9 2.1 7.1E-05 29.1 3.6 64 22-88 10-75 (124)
5 3ga1_A Nucleus accumbens-assoc 77.0 4.6 0.00016 26.1 4.8 52 27-88 36-93 (129)
6 1r29_A B-cell lymphoma 6 prote 75.5 8.1 0.00028 24.6 5.7 64 27-97 32-101 (127)
7 2nz0_B Potassium voltage-gated 74.2 4.3 0.00015 28.1 4.3 63 23-88 33-97 (140)
8 3b84_A Zinc finger and BTB dom 71.6 15 0.00053 23.2 6.3 62 27-98 27-93 (119)
9 2if5_A Zinc finger and BTB dom 65.5 17 0.00058 22.8 5.4 57 27-89 28-89 (120)
10 2yy9_A Zinc finger and BTB dom 64.6 13 0.00043 24.3 4.9 62 27-98 28-94 (135)
11 3ohu_A Transcription regulator 63.2 7.3 0.00025 24.8 3.4 54 27-88 35-94 (125)
12 2q81_A MIZ-1 protein; BTB/POZ 61.5 20 0.00067 22.7 5.2 61 27-98 30-95 (119)
13 3htm_A Speckle-type POZ protei 59.8 20 0.0007 23.5 5.2 57 27-89 37-98 (172)
14 1nn7_A Potassium channel KV4.2 57.8 2.9 0.0001 27.3 0.7 59 27-88 2-62 (105)
15 2ppi_A Gigaxonin; BTB domain, 57.2 38 0.0013 22.2 6.7 60 27-90 50-114 (144)
16 3drx_A BTB/POZ domain-containi 54.2 18 0.00063 26.6 4.6 63 22-88 9-78 (202)
17 4eoz_A Speckle-type POZ protei 53.9 21 0.00073 22.7 4.4 57 27-89 28-89 (145)
18 1buo_A POZ domain, protein (pr 53.3 29 0.001 21.8 5.0 53 27-90 31-88 (121)
19 3fkc_A Transcriptional regulat 52.2 37 0.0013 21.4 5.4 51 27-88 34-89 (116)
20 2z8h_A Transcription regulator 49.2 50 0.0017 21.2 6.0 63 27-97 39-107 (138)
21 1t1d_A Protein (potassium chan 43.5 27 0.00093 22.5 3.7 54 27-86 3-62 (100)
22 3kvt_A Potassium channel prote 39.3 13 0.00045 24.6 1.6 58 25-88 5-68 (115)
23 2al3_A TUG long isoform; TUG U 37.8 25 0.00084 23.0 2.7 40 29-69 13-53 (90)
24 2ihc_A Transcription regulator 32.1 95 0.0033 19.5 5.2 53 27-87 32-90 (124)
25 3pmi_A PWWP domain-containing 31.2 12 0.00042 26.3 0.4 27 35-61 47-78 (134)
26 1zo0_A ODC-AZ, ornithine decar 31.2 32 0.0011 23.7 2.6 36 26-64 37-78 (126)
27 3hqi_A Speckle-type POZ protei 31.0 1.1E+02 0.0037 22.2 5.6 56 27-88 177-237 (312)
28 3hve_A Gigaxonin; ubiquitin, c 24.4 1.2E+02 0.004 21.4 4.7 64 27-96 34-104 (256)
29 2cu1_A Mitogen-activated prote 24.3 1.6E+02 0.0055 19.7 5.0 56 36-91 17-78 (103)
30 2lmc_A Bacterial RNA polymeras 22.1 1.1E+02 0.0036 19.9 3.6 37 23-62 33-69 (84)
No 1
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=85.96 E-value=4.3 Score=26.29 Aligned_cols=60 Identities=23% Similarity=0.246 Sum_probs=46.5
Q ss_pred ceEEEEeecCCceeEEEEcchHH-----HHHHHHHhhHHhcC--cccCCceEEecCHHHHHHHHHHHhcCC
Q 045793 25 GHVRVFVGKDMQFKFEMEANYLN-----LFENLLKLSEEEFG--FSYDGALRIACEIDVFQYLLLLLKTGN 88 (101)
Q Consensus 25 G~~aVyVG~~~~kRfvVp~~~Ln-----~F~~LL~~aeeEfG--~~~~G~L~IPC~~~~Fe~vl~~l~~~~ 88 (101)
..+.+-||. ++|.+..+-|. .|..|.... .++. .+.+|.+-|..+...|++|+.-++.+.
T Consensus 6 ~~v~LNVGG---~~f~t~~~TL~~~p~s~L~~~~~~~-~~~~~~~d~~~~~fiDRdp~~F~~IL~~lr~g~ 72 (107)
T 3drz_A 6 KWVRLNVGG---TYFLTTRQTLCRDPKSFLYRLCQAD-PDLDSDKDETGAYLIDRDPTYFGPVLNYLRHGK 72 (107)
T ss_dssp CEEEEEETT---EEEEEEHHHHTSSTTSHHHHHHTTC-GGGGGGBCTTSCEEECSCHHHHHHHHHHHHHSC
T ss_pred CEEEEEECC---EEEEECHHHHhcCCCcchhHHHhcC-CCCCcCCCCCceEEecCChHHHHHHHHHhCCCe
Confidence 467788996 99999999998 677775432 1232 235699999999999999999999764
No 2
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=81.68 E-value=6.7 Score=24.15 Aligned_cols=60 Identities=18% Similarity=0.186 Sum_probs=42.3
Q ss_pred EEEEeecC-CceeEEEEcchHH----HHHHHHHhhHHhcCcccCCceEEe-cCHHHHHHHHHHHhcCCCC
Q 045793 27 VRVFVGKD-MQFKFEMEANYLN----LFENLLKLSEEEFGFSYDGALRIA-CEIDVFQYLLLLLKTGNPS 90 (101)
Q Consensus 27 ~aVyVG~~-~~kRfvVp~~~Ln----~F~~LL~~aeeEfG~~~~G~L~IP-C~~~~Fe~vl~~l~~~~~~ 90 (101)
+.+.||++ +.++|-++-..|. .|+.++...-.|- . ..+.|| .+.+.|+.++.-+=.+.-.
T Consensus 11 v~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~f~~~~~e~---~-~~i~l~~~~~~~f~~~l~~iYt~~~~ 76 (109)
T 2vkp_A 11 VHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYGDLAEV---K-SEIHIPDVEPAAFLILLKYMYSDEID 76 (109)
T ss_dssp EEEEESSTTSCEEEEECHHHHHHHCHHHHHHHC---------C-CEEEETTSCHHHHHHHHHHHHHCCCC
T ss_pred EEEEECCCCCcEEEEeeHHHHHHcCHHHHHHhcCCcccC---C-CeEEeCCCCHHHHHHHHHHHcCCCcc
Confidence 34566641 3589999999997 9999997643332 2 678897 6999999999988776543
No 3
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=81.18 E-value=5.6 Score=25.03 Aligned_cols=62 Identities=21% Similarity=0.406 Sum_probs=45.4
Q ss_pred EEEEeecCCceeEEEEcchHH----HHHHHHHhhHHhcCcccCCceEEe---cCHHHHHHHHHHHhcCCCCCCCCCccc
Q 045793 27 VRVFVGKDMQFKFEMEANYLN----LFENLLKLSEEEFGFSYDGALRIA---CEIDVFQYLLLLLKTGNPSAHYMQLPD 98 (101)
Q Consensus 27 ~aVyVG~~~~kRfvVp~~~Ln----~F~~LL~~aeeEfG~~~~G~L~IP---C~~~~Fe~vl~~l~~~~~~~~~~~l~~ 98 (101)
+.+.||. ++|-+.-..|. .|+.++... .+..+.|+ .+...|+.++.-+=.+.-.....++.+
T Consensus 25 v~l~v~~---~~~~aHk~vLaa~S~yF~~~f~~~-------~~~~i~l~~~~~~~~~f~~ll~~~Yt~~~~~~~~~v~~ 93 (116)
T 2vpk_A 25 CTIVIGE---FQFKAHRNVLASFSEYFGAIYRST-------SENNVFLDQSQVKADGFQKLLEFIYTGTLNLDSWNVKE 93 (116)
T ss_dssp EEEEETT---EEEEECHHHHHHHCHHHHHHHTTC-------CCSCEECCTTTCCHHHHHHHHHHHHHSCCCCCTTTHHH
T ss_pred EEEEECC---EEEeccHHHHhhcCHHHHHHHcCC-------CCCeEEeecCCCCHHHHHHHHHHHcCCCcccCHHHHHH
Confidence 3456664 78999999997 999999765 35678888 799999999998877654433333333
No 4
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=78.91 E-value=2.1 Score=29.07 Aligned_cols=64 Identities=22% Similarity=0.293 Sum_probs=46.7
Q ss_pred CCCceEEEEeecCCceeEEEEcchHH-HHHHHHHhhHHhcCc-ccCCceEEecCHHHHHHHHHHHhcCC
Q 045793 22 AEEGHVRVFVGKDMQFKFEMEANYLN-LFENLLKLSEEEFGF-SYDGALRIACEIDVFQYLLLLLKTGN 88 (101)
Q Consensus 22 vpkG~~aVyVG~~~~kRfvVp~~~Ln-~F~~LL~~aeeEfG~-~~~G~L~IPC~~~~Fe~vl~~l~~~~ 88 (101)
.+...+.+-||. +||.+..+-|. .=..+|..++...-+ +.+|.+-|..+...|++||..++.+.
T Consensus 10 ~~~~~V~LNVGG---~~F~t~~~TL~~~p~S~L~~~~~~~~~~~~~g~~FiDRdp~~F~~ILnflR~G~ 75 (124)
T 1s1g_A 10 RQDELIVLNVSG---RRFQTWRTTLERYPDTLLGSTEKEFFFNEDTKEYFFDRDPEVFRCVLNFYRTGK 75 (124)
T ss_dssp --CCEEEEEETT---EEEEEEHHHHTTSTTSSTTSSGGGGTBCSSSCSEEECSCHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEEeCC---EEEEEeHHHHhcCCCceecccCCcccccCCCCcEEEcCChHHHHHHHHHHhcCC
Confidence 345678888996 99999999998 222234444443334 34599999999999999999999874
No 5
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=76.96 E-value=4.6 Score=26.07 Aligned_cols=52 Identities=25% Similarity=0.365 Sum_probs=42.1
Q ss_pred EEEEeecCCceeEEEEcchHH----HHHHHHHhhHHhcCcccCCceEEe--cCHHHHHHHHHHHhcCC
Q 045793 27 VRVFVGKDMQFKFEMEANYLN----LFENLLKLSEEEFGFSYDGALRIA--CEIDVFQYLLLLLKTGN 88 (101)
Q Consensus 27 ~aVyVG~~~~kRfvVp~~~Ln----~F~~LL~~aeeEfG~~~~G~L~IP--C~~~~Fe~vl~~l~~~~ 88 (101)
+.+.||. ++|-+.-..|. .|++++... ....+.|| .+.+.|+.++.-+=.+.
T Consensus 36 v~l~v~~---~~~~~Hk~vLaa~S~~F~~~f~~~-------~~~~i~l~~~~~~~~f~~ll~~iYtg~ 93 (129)
T 3ga1_A 36 VSVVVKG---HAFKAHRAVLAASSSYFRDLFNNS-------RSAVVELPAAVQPQSFQQILSFCYTGR 93 (129)
T ss_dssp EEEEETT---EEEEECHHHHHHHBHHHHHHHHHC-------CCSEEECCTTCCHHHHHHHHHHHHHSE
T ss_pred eEEEECC---EEEEehHHHHHHcCHHHHHHHcCC-------CCCEEEECCCCCHHHHHHHHHHHhCCc
Confidence 4566764 78999988888 999998775 45789997 89999999999886553
No 6
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=75.47 E-value=8.1 Score=24.65 Aligned_cols=64 Identities=16% Similarity=0.176 Sum_probs=46.6
Q ss_pred EEEEeecCCceeEEEEcchHH----HHHHHHHhhHHhcCcccCCceEE-e-cCHHHHHHHHHHHhcCCCCCCCCCcc
Q 045793 27 VRVFVGKDMQFKFEMEANYLN----LFENLLKLSEEEFGFSYDGALRI-A-CEIDVFQYLLLLLKTGNPSAHYMQLP 97 (101)
Q Consensus 27 ~aVyVG~~~~kRfvVp~~~Ln----~F~~LL~~aeeEfG~~~~G~L~I-P-C~~~~Fe~vl~~l~~~~~~~~~~~l~ 97 (101)
+.+.||. ++|-+.-..|. .|+.++...-.| ....|.| + .+...|+.++.-+=.+.-.....++.
T Consensus 32 v~l~v~~---~~~~aHk~iLaa~S~~F~~~f~~~~~e----~~~~i~l~~~~~~~~f~~ll~~~Ytg~~~~~~~~~~ 101 (127)
T 1r29_A 32 VVIVVSR---EQFRAHKTVLMACSGLFYSIFTDQLKR----NLSVINLDPEINPEGFNILLDFMYTSRLNLREGNIM 101 (127)
T ss_dssp EEEEETT---EEEEECHHHHHHHCHHHHHHHTSTTTT----TCSEEECCTTSCHHHHHHHHHHHHHSCCCCCTTTHH
T ss_pred EEEEECC---EEEehHHHHHHHhCHHHHHHhcCCccC----CCCEEEeCCCCCHHHHHHHHHHHcCCCcCcCHHHHH
Confidence 4456664 78999999997 999999865444 4578999 4 78999999999887665433333333
No 7
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=74.21 E-value=4.3 Score=28.08 Aligned_cols=63 Identities=22% Similarity=0.300 Sum_probs=47.6
Q ss_pred CCceEEEEeecCCceeEEEEcchHH-HHHHHHHhhHHhcCc-ccCCceEEecCHHHHHHHHHHHhcCC
Q 045793 23 EEGHVRVFVGKDMQFKFEMEANYLN-LFENLLKLSEEEFGF-SYDGALRIACEIDVFQYLLLLLKTGN 88 (101)
Q Consensus 23 pkG~~aVyVG~~~~kRfvVp~~~Ln-~F~~LL~~aeeEfG~-~~~G~L~IPC~~~~Fe~vl~~l~~~~ 88 (101)
....+.+-||. +||.+..+-|. .=..+|..++...-+ +.+|.+-|-.+...|++||.-++.+.
T Consensus 33 ~~~~V~LNVGG---~~F~T~~~TL~~~P~S~L~~~~~~~~~~~~~g~yFiDRdp~~F~~ILnflR~G~ 97 (140)
T 2nz0_B 33 QDELIVLNVSG---RRFQTWRTTLERYPDTLLGSTEKEFFFNEDTKEYFFDRDPEVFRCVLNFYRTGK 97 (140)
T ss_dssp CCCEEEEEETT---EEEEEEHHHHHTCTTSTTTSGGGGGSEETTTTEEEECSCHHHHHHHHHHHHHSS
T ss_pred CCCEEEEEECC---EEEEeeHHHHhcCCCeeecccCCcccccCCCCeEEEeCCcHHHHHHHHHHhcCC
Confidence 45677888996 99999999998 223344444444334 34599999999999999999999874
No 8
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=71.60 E-value=15 Score=23.19 Aligned_cols=62 Identities=19% Similarity=0.259 Sum_probs=44.9
Q ss_pred EEEEeecCCceeEEEEcchHH----HHHHHHHhhHHhcCcccCCceEEe-cCHHHHHHHHHHHhcCCCCCCCCCccc
Q 045793 27 VRVFVGKDMQFKFEMEANYLN----LFENLLKLSEEEFGFSYDGALRIA-CEIDVFQYLLLLLKTGNPSAHYMQLPD 98 (101)
Q Consensus 27 ~aVyVG~~~~kRfvVp~~~Ln----~F~~LL~~aeeEfG~~~~G~L~IP-C~~~~Fe~vl~~l~~~~~~~~~~~l~~ 98 (101)
+.+.||. ++|-+.-..|. .|++++.... .+.|.|| .+.+.|+.++.-+=.+.-.....++.+
T Consensus 27 v~l~v~~---~~f~aHk~vLaa~S~yF~~~f~~~~-------~~~i~l~~~~~~~f~~ll~~iYtg~~~~~~~~v~~ 93 (119)
T 3b84_A 27 ATLDVGG---LVFKAHWSVLACCSHFFQSLYGDGS-------GGSVVLPAGFAEIFGLLLDFFYTGHLALTSGNRDQ 93 (119)
T ss_dssp EEEEETT---EEEEECHHHHHHHCHHHHHHHTTTT-------CCCEEECGGGHHHHHHHHHHHHHSCCCCCTTTHHH
T ss_pred eEEEECC---EEEEeeHHHHhhcCHHHHHHHCCCC-------CCeEEeCCCCHHHHHHHHHHHcCCCCccCHHHHHH
Confidence 3456664 78999888887 9999987531 5789998 678999999999877654433333333
No 9
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=65.49 E-value=17 Score=22.78 Aligned_cols=57 Identities=16% Similarity=0.199 Sum_probs=41.2
Q ss_pred EEEEeecCCceeEEEEcchHH----HHHHHHHhhHHhcCcccCCceEEe-cCHHHHHHHHHHHhcCCC
Q 045793 27 VRVFVGKDMQFKFEMEANYLN----LFENLLKLSEEEFGFSYDGALRIA-CEIDVFQYLLLLLKTGNP 89 (101)
Q Consensus 27 ~aVyVG~~~~kRfvVp~~~Ln----~F~~LL~~aeeEfG~~~~G~L~IP-C~~~~Fe~vl~~l~~~~~ 89 (101)
+.+.||. ++|-+.-..|. .|++++...-.| .....+.|| .+...|+.++.-+=.+.-
T Consensus 28 v~l~v~~---~~~~aHk~vLaa~S~~F~~~f~~~~~e---~~~~~i~l~~~~~~~f~~ll~~~Yt~~~ 89 (120)
T 2if5_A 28 VVILVEG---REFPTHRSVLAACSQYFKKLFTSGAVV---DQQNVYEIDFVSAEALTALMDFAYTATL 89 (120)
T ss_dssp EEEEETT---EEEEECHHHHHHHCHHHHHHHHC--------CCSEEECCSSCHHHHHHHHHHHHHSCC
T ss_pred eEEEECC---EEEeHHHHHHHHhCHHHHHHhcCCccc---cCCceEEeCCCCHHHHHHHHHHHcCCCC
Confidence 3456664 88999988987 999998754332 234678998 689999999998876643
No 10
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=64.58 E-value=13 Score=24.27 Aligned_cols=62 Identities=18% Similarity=0.248 Sum_probs=42.8
Q ss_pred EEEEeecCCceeEEEEcchHH----HHHHHHHhhHHhcCcccCCceEEe-cCHHHHHHHHHHHhcCCCCCCCCCccc
Q 045793 27 VRVFVGKDMQFKFEMEANYLN----LFENLLKLSEEEFGFSYDGALRIA-CEIDVFQYLLLLLKTGNPSAHYMQLPD 98 (101)
Q Consensus 27 ~aVyVG~~~~kRfvVp~~~Ln----~F~~LL~~aeeEfG~~~~G~L~IP-C~~~~Fe~vl~~l~~~~~~~~~~~l~~ 98 (101)
+.+.||. ++|-+.-..|. .|++++.... ...|.|| .+.+.|+.++.-+=.+.-.....++.+
T Consensus 28 v~l~v~~---~~f~aHk~vLaa~S~yF~~mf~~~~-------~~~i~l~~~~~~~f~~lL~fiYtg~~~i~~~~v~~ 94 (135)
T 2yy9_A 28 ATLDVGG---LVFKAHWSVLACCSHFFQRIYGDGT-------GGSVVLPAGFAEIFGLLLDFFYTGHLALTSGNRDQ 94 (135)
T ss_dssp EEEEETT---EEEEECHHHHHHHCHHHHHTCC-----------CCEEECGGGHHHHHHHHHHHHHSCCCCCTTTHHH
T ss_pred eEEEECC---EEEehHHHHHHHhCHHHHHHHcCCC-------CCeEEeCCCCHHHHHHHHHHHhCCCCCCCHHHHHH
Confidence 4456664 78999888887 8998886532 4679998 678999999998877654433333333
No 11
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=63.21 E-value=7.3 Score=24.79 Aligned_cols=54 Identities=20% Similarity=0.190 Sum_probs=41.3
Q ss_pred EEEEeecCCceeEEEEcchHH----HHHHHHHhhHHhcCcccCCceEEe--cCHHHHHHHHHHHhcCC
Q 045793 27 VRVFVGKDMQFKFEMEANYLN----LFENLLKLSEEEFGFSYDGALRIA--CEIDVFQYLLLLLKTGN 88 (101)
Q Consensus 27 ~aVyVG~~~~kRfvVp~~~Ln----~F~~LL~~aeeEfG~~~~G~L~IP--C~~~~Fe~vl~~l~~~~ 88 (101)
+.+.||. ++|-+.-..|. .|++++..... ....+.+| .+...|+.++.-+=.+.
T Consensus 35 v~l~v~~---~~f~aHk~vLaa~S~yF~~~f~~~~~-----e~~~i~l~~~~~~~~f~~~l~~iYtg~ 94 (125)
T 3ohu_A 35 VTLIVER---KEFRAHRAVLAACSEYFWQALVGQTK-----NDLVVSLPEEVTARGFGPLLQFAYTAK 94 (125)
T ss_dssp EEEEETT---EEEEECHHHHHHHBHHHHHHHTTCCC-----SSCEEECCTTCCHHHHHHHHHHHTTSE
T ss_pred eEEEECC---EEEechHHHHHHcCHHHHHHhcCCCC-----CCcEEEeCCCCCHHHHHHHHHhHcCCc
Confidence 4566764 78999888888 89999976432 25678887 79999999999886553
No 12
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=61.52 E-value=20 Score=22.67 Aligned_cols=61 Identities=15% Similarity=0.151 Sum_probs=43.5
Q ss_pred EEEEeecCCceeEEEEcchHH----HHHHHHHhhHHhcCcccCCceEEec-CHHHHHHHHHHHhcCCCCCCCCCccc
Q 045793 27 VRVFVGKDMQFKFEMEANYLN----LFENLLKLSEEEFGFSYDGALRIAC-EIDVFQYLLLLLKTGNPSAHYMQLPD 98 (101)
Q Consensus 27 ~aVyVG~~~~kRfvVp~~~Ln----~F~~LL~~aeeEfG~~~~G~L~IPC-~~~~Fe~vl~~l~~~~~~~~~~~l~~ 98 (101)
+.+.||. ++|-+.-..|. .|++++.. +...+.++- +...|+.++.-+=.+.-.....++.+
T Consensus 30 v~l~v~~---~~~~aHk~vLaa~S~yF~~~f~~--------~~~~i~l~~~~~~~f~~ll~~~Ytg~~~i~~~~~~~ 95 (119)
T 2q81_A 30 CTFVVDG---VHFKAHKAVLAACSEYFKMLFVD--------QKDVVHLDISNAAGLGQVLEFMYTAKLSLSPENVDD 95 (119)
T ss_dssp EEEEETT---EEEEECHHHHHHHCHHHHHHHHH--------CCSGGGGGGCCHHHHHHHHHHHHHSCCCCCTTTHHH
T ss_pred eEEEECC---EEEehhHHHHHHcCHHHHHHHcC--------CCCEEEeCCCCHHHHHHHHHHHcCCCCccCHHHHHH
Confidence 3456664 78999989887 99999875 245677774 78999999998877654433333333
No 13
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=59.83 E-value=20 Score=23.52 Aligned_cols=57 Identities=23% Similarity=0.383 Sum_probs=42.8
Q ss_pred EEEEeecCCceeEEEEcchHH----HHHHHHHhhHHhcCcccCCceEEe-cCHHHHHHHHHHHhcCCC
Q 045793 27 VRVFVGKDMQFKFEMEANYLN----LFENLLKLSEEEFGFSYDGALRIA-CEIDVFQYLLLLLKTGNP 89 (101)
Q Consensus 27 ~aVyVG~~~~kRfvVp~~~Ln----~F~~LL~~aeeEfG~~~~G~L~IP-C~~~~Fe~vl~~l~~~~~ 89 (101)
+.+.||. ++|-++-..|. .|+.++...-.| .....+.|| .+.+.|+.++.-+=.+.-
T Consensus 37 v~l~v~~---~~~~~Hk~iL~~~S~~F~~~f~~~~~e---~~~~~i~l~~~~~~~f~~~l~~~Yt~~~ 98 (172)
T 3htm_A 37 CCLCVAG---QEFQAHKAILAARSPVFSAMFEHEMEE---SKKNRVEINDVEPEVFKEMMCFIYTGKA 98 (172)
T ss_dssp EEEEETT---EEEEECHHHHHHHCHHHHHHHHSCCCG---GGTTEEEECSSCHHHHHHHHHHHHHSCC
T ss_pred eEEEECC---EEEEeeHHHHHHcCHHHHHHHccCccc---cCCCeEEecCCCHHHHHHHHHHHhCCCC
Confidence 5666764 78999988987 999999853211 234789998 689999999998876654
No 14
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=57.78 E-value=2.9 Score=27.31 Aligned_cols=59 Identities=22% Similarity=0.319 Sum_probs=42.4
Q ss_pred EEEEeecCCceeEEEEcchHH-HHHHHHHhhHHhcCc-ccCCceEEecCHHHHHHHHHHHhcCC
Q 045793 27 VRVFVGKDMQFKFEMEANYLN-LFENLLKLSEEEFGF-SYDGALRIACEIDVFQYLLLLLKTGN 88 (101)
Q Consensus 27 ~aVyVG~~~~kRfvVp~~~Ln-~F~~LL~~aeeEfG~-~~~G~L~IPC~~~~Fe~vl~~l~~~~ 88 (101)
+.+-||. +||.+..+-|. .=..+|..++...-+ +.+|.+-|..+...|++||.-++.+.
T Consensus 2 V~LNVGG---~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~~~FiDRdp~~F~~ILnflR~g~ 62 (105)
T 1nn7_A 2 IVLNVSG---TRFQTWQDTLERYPDTLLGSSERDFFYHPETQQYFFDRDPDIFRHILNFYRTGK 62 (105)
T ss_dssp EEEEETT---EEEEECHHHHHTSCSSSTTSGGGGGGEEGGGTEEEECSCTTTHHHHHHHHHHSC
T ss_pred EEEEECC---EEEEEeHHHHhcCCCccccccCCcccccCCCCcEEEeCCcHHHHHHHHHHhcCC
Confidence 4456885 99999999998 111233333333333 34599999999999999999999874
No 15
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=57.16 E-value=38 Score=22.23 Aligned_cols=60 Identities=10% Similarity=0.133 Sum_probs=42.3
Q ss_pred EEEEeecCCceeEEEEcchHH----HHHHHHHhhHHhcCcccCCceEEe-cCHHHHHHHHHHHhcCCCC
Q 045793 27 VRVFVGKDMQFKFEMEANYLN----LFENLLKLSEEEFGFSYDGALRIA-CEIDVFQYLLLLLKTGNPS 90 (101)
Q Consensus 27 ~aVyVG~~~~kRfvVp~~~Ln----~F~~LL~~aeeEfG~~~~G~L~IP-C~~~~Fe~vl~~l~~~~~~ 90 (101)
+.+.||. ++|-+.-..|. .|++++...-.|-. .....|.|| .+.+.|+.++.-+=.+.-.
T Consensus 50 v~l~v~~---~~f~aHk~vLaa~S~yF~~mf~~~~~e~e-~~~~~I~l~~v~~~~f~~lL~fiYtg~~~ 114 (144)
T 2ppi_A 50 AHLVLDG---EEIPVQKNILAAASPYIRTKLNYNPPKDD-GSTYKIELEGISVMVMREILDYIFSGQIR 114 (144)
T ss_dssp EEEEETT---EEEEECHHHHHHHCHHHHHHHHHCC------CCCEEECCSSCHHHHHHHHHHHTTSCCC
T ss_pred eEEEECC---EEEehHHHHHHHcCHHHHHHHcCCCcccc-CCCcEEEeCCCCHHHHHHHHHHHhCCCCC
Confidence 3456664 78999988888 99999975211100 134679998 5999999999999766543
No 16
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=54.23 E-value=18 Score=26.62 Aligned_cols=63 Identities=22% Similarity=0.231 Sum_probs=46.9
Q ss_pred CCCceEEEEeecCCceeEEEEcchHH-----HHHHHHHhhHHhcC--cccCCceEEecCHHHHHHHHHHHhcCC
Q 045793 22 AEEGHVRVFVGKDMQFKFEMEANYLN-----LFENLLKLSEEEFG--FSYDGALRIACEIDVFQYLLLLLKTGN 88 (101)
Q Consensus 22 vpkG~~aVyVG~~~~kRfvVp~~~Ln-----~F~~LL~~aeeEfG--~~~~G~L~IPC~~~~Fe~vl~~l~~~~ 88 (101)
-+.-.+.+-||. +||.+..+-|. .|..|.... .++. .+.+|.+-|..+...|++||..++.+.
T Consensus 9 ~~~~~V~LNVGG---~~F~Tt~sTL~r~PdS~L~~lfs~~-~~~~~~~De~geyFIDRDP~~F~~ILnyLRtG~ 78 (202)
T 3drx_A 9 SVSKWVRLNVGG---TYFLTTRQTLCRDPKSFLYRLCQAD-PDLDSDKDETGAYLIDRDPTYFGPVLNYLRHGK 78 (202)
T ss_dssp CCCCEEEEEETT---EEEEEETTGGGSCTTSSTHHHHSCC-CC----BCTTCCEEECSCSTTHHHHHHHHHHSC
T ss_pred CCCCEEEEEECC---EEEEEeHHHHhCCCcchHHHHhcCc-cccCcccCCCccEEecCChHHHHHHHHHhcCCc
Confidence 345677888996 99999999988 566664321 1232 345699999999999999999999764
No 17
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=53.87 E-value=21 Score=22.72 Aligned_cols=57 Identities=23% Similarity=0.383 Sum_probs=42.1
Q ss_pred EEEEeecCCceeEEEEcchHH----HHHHHHHhhHHhcCcccCCceEEe-cCHHHHHHHHHHHhcCCC
Q 045793 27 VRVFVGKDMQFKFEMEANYLN----LFENLLKLSEEEFGFSYDGALRIA-CEIDVFQYLLLLLKTGNP 89 (101)
Q Consensus 27 ~aVyVG~~~~kRfvVp~~~Ln----~F~~LL~~aeeEfG~~~~G~L~IP-C~~~~Fe~vl~~l~~~~~ 89 (101)
+.+.||. ++|-+.-..|. .|+.++...-.| ...+.+.+| .+.+.|+.++.-+=.+.-
T Consensus 28 v~l~v~~---~~~~~Hk~iL~~~S~~F~~~f~~~~~e---~~~~~i~l~~~~~~~~~~~l~~~Y~~~~ 89 (145)
T 4eoz_A 28 CCLCVAG---QEFQAHKAILAARSPVFSAMFEHEMEE---SKKNRVEINDVEPEVFKEMMCFIYTGKA 89 (145)
T ss_dssp EEEEETT---EEEEECHHHHHHHCHHHHHHHHSSSHH---HHHTEEEECSSCHHHHHHHHHHHHHSCC
T ss_pred eEEEECC---EEEEeehHHHHHcCHHHHHHHcCCCcC---CCCceEEecCCCHHHHHHHHHhhccCcc
Confidence 4566764 78999888886 999999753222 123678887 799999999998876643
No 18
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=53.27 E-value=29 Score=21.82 Aligned_cols=53 Identities=21% Similarity=0.248 Sum_probs=40.9
Q ss_pred EEEEeecCCceeEEEEcchHH----HHHHHHHhhHHhcCcccCCceEEe-cCHHHHHHHHHHHhcCCCC
Q 045793 27 VRVFVGKDMQFKFEMEANYLN----LFENLLKLSEEEFGFSYDGALRIA-CEIDVFQYLLLLLKTGNPS 90 (101)
Q Consensus 27 ~aVyVG~~~~kRfvVp~~~Ln----~F~~LL~~aeeEfG~~~~G~L~IP-C~~~~Fe~vl~~l~~~~~~ 90 (101)
+.+.||. ++|-++-..|. .|++++.. ....+.|+ .+.+.|+.++.-+=.+.-.
T Consensus 31 v~l~v~~---~~f~aHk~vLaa~S~yF~~~f~~--------~~~~i~l~~~~~~~f~~ll~~~Ytg~~~ 88 (121)
T 1buo_A 31 VVIMVDS---QEFHAHRTVLACTSKMFEILFHR--------NSQHYTLDFLSPKTFQQILEYAYTATLQ 88 (121)
T ss_dssp EEEEESS---CEEEECHHHHHHHCHHHHHHTTS--------CCSEEEECSSCHHHHHHHHHHHHHSCCC
T ss_pred EEEEECC---EEEehhHHHHhhcCHHHHHHHcC--------CCcEEEeCCCCHHHHHHHHHhhcCCCcC
Confidence 4456664 78988888887 99999864 24578888 7999999999988766543
No 19
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=52.19 E-value=37 Score=21.39 Aligned_cols=51 Identities=22% Similarity=0.415 Sum_probs=40.3
Q ss_pred EEEEeecCCceeEEEEcchHH----HHHHHHHhhHHhcCcccCCceEEe-cCHHHHHHHHHHHhcCC
Q 045793 27 VRVFVGKDMQFKFEMEANYLN----LFENLLKLSEEEFGFSYDGALRIA-CEIDVFQYLLLLLKTGN 88 (101)
Q Consensus 27 ~aVyVG~~~~kRfvVp~~~Ln----~F~~LL~~aeeEfG~~~~G~L~IP-C~~~~Fe~vl~~l~~~~ 88 (101)
+.+.||. ++|-+.-..|. .|++++... ...|.+| .+.+.|+.++.-+=.+.
T Consensus 34 v~l~v~~---~~f~aHk~vLaa~S~~F~~~f~~~--------~~~i~l~~~~~~~f~~~l~~~Ytg~ 89 (116)
T 3fkc_A 34 VTVIVED---RKFRAHKNILSASSTYFHQLFSVA--------GQVVELSFIRAEIFAEILNYIYSSK 89 (116)
T ss_dssp EEEEETT---EEEEECHHHHHHHCHHHHHHTTSC--------CSEEEECSSCHHHHHHHHHHHTTSC
T ss_pred EEEEECC---EEEehhHHHHHHcCHHHHHHHcCC--------CCEEEeCCCCHHHHHHHHHhhcCCC
Confidence 4556764 78999888887 999988753 4578887 89999999999987654
No 20
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=49.15 E-value=50 Score=21.23 Aligned_cols=63 Identities=14% Similarity=0.159 Sum_probs=43.8
Q ss_pred EEEEeecCCceeEEEEcchHH----HHHHHHHhhHHhcCcccCCceEEe--cCHHHHHHHHHHHhcCCCCCCCCCcc
Q 045793 27 VRVFVGKDMQFKFEMEANYLN----LFENLLKLSEEEFGFSYDGALRIA--CEIDVFQYLLLLLKTGNPSAHYMQLP 97 (101)
Q Consensus 27 ~aVyVG~~~~kRfvVp~~~Ln----~F~~LL~~aeeEfG~~~~G~L~IP--C~~~~Fe~vl~~l~~~~~~~~~~~l~ 97 (101)
+.+.||. ++|-+.-..|. .|+.++.... .....+.+| .+...|+.++.-+=.+.-.....++.
T Consensus 39 v~l~v~~---~~f~aHk~vLaa~S~yF~~~f~~~~-----~e~~~i~l~~~v~~~~~~~lL~~~Ytg~~~i~~~~v~ 107 (138)
T 2z8h_A 39 VTVLVEG---QRFRAHRSVLAACSSYFHSRIVGQT-----DAELTVTLPEEVTVKGFEPLIQFAYTAKLILSKDNVD 107 (138)
T ss_dssp EEEEETT---EEEEECHHHHHHHCHHHHHHHTTCC-----CTTEEEECCTTSCHHHHHHHHHHHHHSCCCCCTTTHH
T ss_pred eEEEECC---EEEechHHHHHHcCHHHHHHHhcCC-----CCCceEEeCCCCCHHHHHHHHHHhcCCCcccCHHHHH
Confidence 4456664 78999988987 9999987532 223568885 68899999999887665433333333
No 21
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A
Probab=43.50 E-value=27 Score=22.51 Aligned_cols=54 Identities=20% Similarity=0.255 Sum_probs=40.6
Q ss_pred EEEEeecCCceeEEEEcchHH-----HHHHHHHhhHHhcCcc-cCCceEEecCHHHHHHHHHHHhc
Q 045793 27 VRVFVGKDMQFKFEMEANYLN-----LFENLLKLSEEEFGFS-YDGALRIACEIDVFQYLLLLLKT 86 (101)
Q Consensus 27 ~aVyVG~~~~kRfvVp~~~Ln-----~F~~LL~~aeeEfG~~-~~G~L~IPC~~~~Fe~vl~~l~~ 86 (101)
+.+-||. +||....+-|. ++..+... .--|+ .+|..-|--+...|++||.-++.
T Consensus 3 v~LNVGG---~~f~t~~~TL~~~p~s~L~~~~~~---~~~~~~~~~eyFiDRdp~~F~~ILnflR~ 62 (100)
T 1t1d_A 3 VVINVSG---LRFETQLKTLNQFPDTLLGNPQKR---NRYYDPLRNEYFFDRNRPSFDAILYFYQS 62 (100)
T ss_dssp EEEEETT---EEEEEEHHHHHTSTTSTTTCHHHH---GGGEETTTTEEEECSCSTTHHHHHHHHHT
T ss_pred EEEEECC---EEEEeeHHHHhcCCCccccchhcc---ccccCCCceeEEEcCChHHHHHHHHHHhc
Confidence 4566885 99999999997 34444332 11243 45999999999999999999997
No 22
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=39.25 E-value=13 Score=24.61 Aligned_cols=58 Identities=16% Similarity=0.197 Sum_probs=43.4
Q ss_pred ceEEEEeecCCceeEEEEcchHH-----HHHHHHHhhHHhcCcc-cCCceEEecCHHHHHHHHHHHhcCC
Q 045793 25 GHVRVFVGKDMQFKFEMEANYLN-----LFENLLKLSEEEFGFS-YDGALRIACEIDVFQYLLLLLKTGN 88 (101)
Q Consensus 25 G~~aVyVG~~~~kRfvVp~~~Ln-----~F~~LL~~aeeEfG~~-~~G~L~IPC~~~~Fe~vl~~l~~~~ 88 (101)
..+.+-||. +||....+-|. .+..|... -..++ .+|.+-|.-+...|++||.-++.+.
T Consensus 5 ~~V~LNVGG---~~f~T~~~TL~~~P~s~L~~l~~~---~~~~~~~~g~~FiDRdp~~F~~ILnylR~G~ 68 (115)
T 3kvt_A 5 NRVIINVGG---IRHETYKATLKKIPATRLSRLTEG---MLNYDPVLNEYFFDRHPGVFAQIINYYRSGK 68 (115)
T ss_dssp CEEEEEETT---EEEEEEHHHHTTSCSSTTTTCCTT---STTEETTTTEEEECSCTTTHHHHHHHHHHSC
T ss_pred CEEEEEECC---EEEEecHHHHhcCCCccHHHHhcC---CCCCCCCCCcEEEecChHHHHHHHHHhcCCC
Confidence 457778985 99999998887 34444332 12343 4599999999999999999998764
No 23
>2al3_A TUG long isoform; TUG UBL1 insulin, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: d.15.1.2
Probab=37.80 E-value=25 Score=22.98 Aligned_cols=40 Identities=8% Similarity=0.042 Sum_probs=28.5
Q ss_pred EEeecCCceeEEEEcchHHHHHHHHHhhHHhcCcccC-CceE
Q 045793 29 VFVGKDMQFKFEMEANYLNLFENLLKLSEEEFGFSYD-GALR 69 (101)
Q Consensus 29 VyVG~~~~kRfvVp~~~Ln~F~~LL~~aeeEfG~~~~-G~L~ 69 (101)
+++.. ..+|+.|++.==..+.+.|++|-+.||++.+ ..|.
T Consensus 13 ~Vl~~-n~rr~~VKvtp~t~L~~VL~eaC~K~gl~~~~~~Lk 53 (90)
T 2al3_A 13 SVLAP-NGRRHTVKVTPSTVLLQVLEDTCRRQDFNPSEYDLK 53 (90)
T ss_dssp EEECT-TSCEEEECCCTTSBHHHHHHHHHHHTTCCGGGCEEE
T ss_pred EEEcC-CCcEEEEEECCCCCHHHHHHHHHHHhCCChhhCeEE
Confidence 33434 5799999984333888999999999999753 4443
No 24
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=32.08 E-value=95 Score=19.46 Aligned_cols=53 Identities=17% Similarity=0.272 Sum_probs=38.6
Q ss_pred EEEEeecCCceeEEEEcchHH----HHHHHHHhhHHhcCcccCCceEEe--cCHHHHHHHHHHHhcC
Q 045793 27 VRVFVGKDMQFKFEMEANYLN----LFENLLKLSEEEFGFSYDGALRIA--CEIDVFQYLLLLLKTG 87 (101)
Q Consensus 27 ~aVyVG~~~~kRfvVp~~~Ln----~F~~LL~~aeeEfG~~~~G~L~IP--C~~~~Fe~vl~~l~~~ 87 (101)
+.+.||. ++|-+.-..|. .|++++..... ....+.+| .+...|+.++.-+=.+
T Consensus 32 v~l~v~~---~~~~aHk~vLaa~S~yF~~mf~~~~~-----e~~~i~l~~~v~~~~f~~lL~~iYtg 90 (124)
T 2ihc_A 32 VTIFVEG---QRFRAHRSVLAACSSYFHSRIVGQAD-----GELNITLPEEVTVKGFEPLIQFAYTA 90 (124)
T ss_dssp EEEEETT---EEEEECHHHHHHHBHHHHHHHTTC--------CEEEECCTTSCHHHHHHHHHHHHHS
T ss_pred EEEEECC---EEEecHHHHHHHcCHHHHHHHcCCCC-----CCceEeecCCcCHHHHHHHHHHhcCC
Confidence 3456664 78999988887 99999975432 23568885 7889999999887655
No 25
>3pmi_A PWWP domain-containing protein MUM1; structural genomics consortium, SGC, protein binding, nucLeu; HET: UNL; 2.82A {Homo sapiens}
Probab=31.17 E-value=12 Score=26.31 Aligned_cols=27 Identities=22% Similarity=0.284 Sum_probs=24.9
Q ss_pred CceeEEEEcchHH-----HHHHHHHhhHHhcC
Q 045793 35 MQFKFEMEANYLN-----LFENLLKLSEEEFG 61 (101)
Q Consensus 35 ~~kRfvVp~~~Ln-----~F~~LL~~aeeEfG 61 (101)
+++=|-||+.=|+ --++|+++|.|.||
T Consensus 47 ekrGi~V~LrrLK~fDC~ek~~L~~rAre~Y~ 78 (134)
T 3pmi_A 47 KMKGFTVSLKSLKHFDCKEKQTLLNQAREDFN 78 (134)
T ss_dssp TSCCEEEEGGGCEETTSTTHHHHHHHHTTTCH
T ss_pred ccCceEeEcccCCCCChHhHHHHHHHHHHHhc
Confidence 6888999999998 88999999999997
No 26
>1zo0_A ODC-AZ, ornithine decarboxylase antizyme; ornithine decarboxylase inhibitor, lyase inhibitor; NMR {Rattus norvegicus} SCOP: d.108.1.7
Probab=31.16 E-value=32 Score=23.72 Aligned_cols=36 Identities=25% Similarity=0.278 Sum_probs=24.5
Q ss_pred eEEEEeecCCceeEE-EEcchHH-----HHHHHHHhhHHhcCccc
Q 045793 26 HVRVFVGKDMQFKFE-MEANYLN-----LFENLLKLSEEEFGFSY 64 (101)
Q Consensus 26 ~~aVyVG~~~~kRfv-Vp~~~Ln-----~F~~LL~~aeeEfG~~~ 64 (101)
+-+|..|. .=|+ ||..-+- -|..||+-|||+.+.++
T Consensus 37 W~~Vl~~~---~Lyv~iP~~~~~~gsKe~fv~LLEfAEe~L~~~~ 78 (126)
T 1zo0_A 37 WRAVWNGG---GLYIELPAGPLPEGSKDSFAALLEFAEEQLRADH 78 (126)
T ss_dssp EEEEEETT---EEEEECSSCCCSSCCSHHHHHHHHHHHHHHCCCC
T ss_pred EEEEEeCC---eEEEEcCCccccccchHHHHHHHHHHHHhcCCCE
Confidence 33444442 5555 6665543 99999999999988654
No 27
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=31.04 E-value=1.1e+02 Score=22.20 Aligned_cols=56 Identities=23% Similarity=0.388 Sum_probs=40.5
Q ss_pred EEEEeecCCceeEEEEcchHH----HHHHHHHhhHHhcCcccCCceEEe-cCHHHHHHHHHHHhcCC
Q 045793 27 VRVFVGKDMQFKFEMEANYLN----LFENLLKLSEEEFGFSYDGALRIA-CEIDVFQYLLLLLKTGN 88 (101)
Q Consensus 27 ~aVyVG~~~~kRfvVp~~~Ln----~F~~LL~~aeeEfG~~~~G~L~IP-C~~~~Fe~vl~~l~~~~ 88 (101)
+.+.||. ++|-++-..|. .|++++...-.| .....|.|+ .+.+.|+.+|..|=.+.
T Consensus 177 v~l~v~~---~~f~~Hk~vLaa~S~~F~~~f~~~~~e---~~~~~i~l~~~~~~~f~~~L~~iYt~~ 237 (312)
T 3hqi_A 177 CCLCVAG---QEFQAHKAILAARSPVFSAMFEHEMEE---SKKNRVEINDVEPEVFKEMMCFIYTGK 237 (312)
T ss_dssp EEEEETT---EEEEECHHHHHHHCHHHHHHTTC--------CCSEEEECSSCHHHHHHHHHHHHHSC
T ss_pred eEEEECC---EEEeHHHHHHHHcCHHHHHHhccCccc---cCCceEEecCCCHHHHHHHHHhhcCCC
Confidence 4556664 77999999997 999999753322 234679998 79999999999886553
No 28
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=24.35 E-value=1.2e+02 Score=21.35 Aligned_cols=64 Identities=9% Similarity=0.141 Sum_probs=41.5
Q ss_pred EEEEeecCCceeEEEEcchHH----HHHHHHHhhHH--hcCcccCCceEEe-cCHHHHHHHHHHHhcCCCCCCCCCc
Q 045793 27 VRVFVGKDMQFKFEMEANYLN----LFENLLKLSEE--EFGFSYDGALRIA-CEIDVFQYLLLLLKTGNPSAHYMQL 96 (101)
Q Consensus 27 ~aVyVG~~~~kRfvVp~~~Ln----~F~~LL~~aee--EfG~~~~G~L~IP-C~~~~Fe~vl~~l~~~~~~~~~~~l 96 (101)
+.+.||. ++|-++-..|. .|++++...-. | .....|.|| .+...|+.++.-+=.+.-.....++
T Consensus 34 v~l~v~~---~~f~~Hr~vLaa~S~yF~~mf~~~~~~~e---~~~~~i~l~~v~~~~f~~ll~~~Yt~~~~i~~~~v 104 (256)
T 3hve_A 34 AHLVLDG---EEIPVQKNILAAASPYIRTKLNYNPPKDD---GSTYKIELEGISVMVMREILDYIFSGQIRLNEDTI 104 (256)
T ss_dssp EEEEETT---EEEEECHHHHHTTCHHHHHTC--------------CEEECSSCCHHHHHHHHHHHHHSCCCCC-CCH
T ss_pred eEEEECC---EEEechHHHHHHcCHHHHHHhCCCCCccc---CCCCeEEeCCCCHHHHHHHHhhccCCCCcccHhHH
Confidence 4566774 78999988897 99998864211 2 134678887 6999999999988776544333333
No 29
>2cu1_A Mitogen-activated protein kinase kinase kinase 2; PB1 domain, MAPK/ERK kinase kinase 2, MEK kinase 2, MEKK 2, signaling protein; NMR {Homo sapiens} SCOP: d.15.2.2
Probab=24.29 E-value=1.6e+02 Score=19.69 Aligned_cols=56 Identities=20% Similarity=0.077 Sum_probs=38.8
Q ss_pred ceeEEEEcchHHHHHHHHHhhHHhcCcc-----cCCceEEec-CHHHHHHHHHHHhcCCCCC
Q 045793 36 QFKFEMEANYLNLFENLLKLSEEEFGFS-----YDGALRIAC-EIDVFQYLLLLLKTGNPSA 91 (101)
Q Consensus 36 ~kRfvVp~~~Ln~F~~LL~~aeeEfG~~-----~~G~L~IPC-~~~~Fe~vl~~l~~~~~~~ 91 (101)
.+|+++++.===.|.+|..++.+-||.. .+--|.||= .-+..++++.++++..+..
T Consensus 17 GEkRIi~f~RPv~f~eL~~Kv~~~fGq~ldL~y~n~EllIpl~sQeDLDkaIellDrss~~k 78 (103)
T 2cu1_A 17 GEKRILQFPRPVKLEDLRSKAKIAFGQSMDLHYTNNELVIPLTTQDDLDKAVELLDRSIHMK 78 (103)
T ss_dssp TEEEEEEEESSCCHHHHHHHHHHHHSSCEEEEECSSSSCEECCSHHHHHHHHHHHHHCSSCC
T ss_pred CeEEEEeccCCccHHHHHHHHHHHhCCeeeEEEecceEEEeccCHHHHHHHHHHHccCCccc
Confidence 3455554331117999999999999974 345577773 5667899999998875544
No 30
>2lmc_A Bacterial RNA polymerase inhibitor; transferase, transcription; NMR {Enterobacteria phage T7} PDB: 2wnm_A
Probab=22.07 E-value=1.1e+02 Score=19.85 Aligned_cols=37 Identities=14% Similarity=0.171 Sum_probs=20.2
Q ss_pred CCceEEEEeecCCceeEEEEcchHHHHHHHHHhhHHhcCc
Q 045793 23 EEGHVRVFVGKDMQFKFEMEANYLNLFENLLKLSEEEFGF 62 (101)
Q Consensus 23 pkG~~aVyVG~~~~kRfvVp~~~Ln~F~~LL~~aeeEfG~ 62 (101)
.|-+++-..|. ..-|.||+-- ..+.+-|+.||++|+-
T Consensus 33 ~KKf~vtveg~--~~s~EVPV~A-~sLdEAlE~AE~eYee 69 (84)
T 2lmc_A 33 NKKFWATVESS--EHSFEVPIYA-ETLDEALELAEWQYVP 69 (84)
T ss_dssp SSEEEEEEECS--SCEEEEEECC-SSHHHHHHHHHHTTGG
T ss_pred ceEEEEEEecc--cceEEEeeec-ccHHHHHHHHHHHhhh
Confidence 33344444442 3445555422 1556677888988863
Done!