Query 045796
Match_columns 378
No_of_seqs 147 out of 1517
Neff 9.7
Searched_HMMs 29240
Date Mon Mar 25 09:25:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045796.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045796hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3swz_A Steroid 17-alpha-hydrox 100.0 3E-50 1E-54 393.6 28.0 321 47-378 6-338 (494)
2 3pm0_A Cypib1, cytochrome P450 100.0 6.8E-50 2.3E-54 392.1 23.0 324 46-378 6-344 (507)
3 2hi4_A Cytochrome P450 1A2; CY 100.0 4.4E-48 1.5E-52 378.5 24.3 321 47-378 14-347 (495)
4 3czh_A Cytochrome P450 2R1; vi 100.0 1.4E-47 4.9E-52 373.6 23.8 320 47-378 10-338 (481)
5 3e6i_A CYPIIE1, P450-J, cytoch 100.0 7E-47 2.4E-51 367.8 27.6 318 46-378 7-332 (476)
6 3tbg_A Cytochrome P450 2D6; mo 100.0 5.6E-47 1.9E-51 368.7 25.9 322 46-378 7-337 (479)
7 1r9o_A Cytochrome P450 2C9; mo 100.0 9.5E-47 3.3E-51 367.3 27.4 317 48-378 10-334 (477)
8 3qz1_A Steroid 21-hydroxylase; 100.0 5.2E-48 1.8E-52 377.8 18.5 312 46-378 26-347 (496)
9 3k9v_A 1,25-dihydroxyvitamin D 100.0 5.8E-47 2E-51 368.9 23.8 313 47-378 22-348 (482)
10 1po5_A Cytochrome P450 2B4; ox 100.0 7.3E-47 2.5E-51 368.1 23.8 314 48-378 9-333 (476)
11 2fdv_A Cytochrome P450 2A6; CY 100.0 1.2E-46 4.2E-51 366.5 25.1 316 49-378 10-333 (476)
12 3s79_A Cytochrome P450 19A1; o 100.0 7.1E-47 2.4E-51 370.4 21.2 310 48-378 44-359 (503)
13 3nxu_A Cytochrome P450 3A4; al 100.0 1.4E-47 4.9E-52 373.7 12.7 313 49-378 14-337 (485)
14 2ij2_A Cytochrome P450 BM3; mo 100.0 4.2E-45 1.4E-49 355.1 24.1 312 49-378 3-317 (470)
15 3gw9_A Sterol 14alpha-demethyl 100.0 1.6E-45 5.6E-50 355.6 15.8 311 48-378 2-318 (450)
16 3ld6_A Lanosterol 14-alpha dem 100.0 1.9E-45 6.4E-50 356.7 13.9 307 48-378 10-318 (461)
17 3n9y_A Cholesterol SIDE-chain 100.0 1.8E-44 6E-49 352.0 20.7 319 45-378 5-340 (487)
18 2cib_A Cytochrome P450 51; hem 100.0 1.7E-43 5.8E-48 342.4 19.4 305 49-378 4-310 (455)
19 2ve3_A Putative cytochrome P45 100.0 1.6E-43 5.3E-48 341.6 18.1 298 47-378 10-307 (444)
20 3i3k_A Lanosterol 14-alpha dem 100.0 5E-43 1.7E-47 339.5 13.9 308 47-378 9-318 (461)
21 3dbg_A Putative cytochrome P45 100.0 7.7E-43 2.6E-47 338.9 14.7 302 49-378 23-327 (467)
22 3mdm_A Cholesterol 24-hydroxyl 100.0 1.1E-41 3.6E-46 329.7 22.0 294 67-378 9-308 (456)
23 3v8d_A Cholesterol 7-alpha-mon 100.0 6.4E-40 2.2E-44 320.3 8.4 306 46-378 10-332 (491)
24 3dax_A Cytochrome P450 7A1; ch 100.0 4.9E-39 1.7E-43 313.8 10.2 306 46-378 10-332 (491)
25 3b6h_A Prostacyclin synthase; 100.0 1.2E-36 4E-41 297.6 13.4 307 47-378 16-334 (498)
26 2cd8_A Cytochrome P450 monooxy 100.0 1.6E-35 5.4E-40 284.8 19.8 263 49-355 26-294 (436)
27 1jfb_A Nitric-oxide reductase 100.0 1.2E-33 4E-38 269.2 22.9 261 50-353 2-269 (404)
28 1izo_A P450bsbeta, cytochrome 100.0 1.4E-33 4.8E-38 269.8 20.5 261 57-353 8-271 (417)
29 1cpt_A Cytochrome P450-TERP; o 100.0 1.2E-33 3.9E-38 271.3 19.9 275 47-355 4-298 (428)
30 3b98_A Prostaglandin I2 syntha 100.0 4.8E-35 1.7E-39 284.4 9.6 294 47-378 16-315 (475)
31 1ued_A P450 OXYC, P450 monooxy 100.0 2.8E-33 9.7E-38 266.8 20.2 256 48-355 9-276 (406)
32 3awm_A Fatty acid alpha-hydrox 100.0 6E-33 2.1E-37 265.3 20.8 264 51-353 4-270 (415)
33 3dsk_A Cytochrome P450 74A, ch 100.0 1.3E-34 4.5E-39 282.9 9.2 292 46-378 25-350 (495)
34 2zbx_A Cytochrome P450-SU1; be 100.0 2.6E-32 8.9E-37 260.6 24.4 261 48-354 4-274 (412)
35 1n97_A CYP175A1; electron tran 100.0 7.2E-34 2.5E-38 269.4 10.4 252 52-357 2-254 (389)
36 3oo3_A OXY protein; cytochrome 100.0 1.7E-31 6E-36 252.5 23.0 244 67-356 11-258 (384)
37 2zwu_A Camphor 5-monooxygenase 100.0 1.3E-31 4.4E-36 255.9 19.2 261 46-355 8-280 (415)
38 2jjn_A Cytochrome P450 113A1; 100.0 3.6E-31 1.2E-35 252.6 22.1 256 46-355 16-272 (411)
39 3dan_A Cytochrome P450 74A2; A 100.0 3.9E-33 1.3E-37 270.8 8.5 293 46-378 6-333 (473)
40 3aba_A Cytochrome P450; oxidor 100.0 8.7E-31 3E-35 249.3 24.5 245 66-355 17-268 (403)
41 3ivy_A Cytochrome P450 CYP125; 100.0 6.2E-31 2.1E-35 252.6 21.6 266 48-355 17-299 (433)
42 1s1f_A Putative cytochrome P45 100.0 6.4E-31 2.2E-35 250.5 21.0 257 49-355 8-272 (406)
43 3abb_A CYP105D6, cytochrome P4 100.0 2.2E-31 7.5E-36 253.9 17.8 245 65-355 21-274 (408)
44 1odo_A Putative cytochrome P45 100.0 4.9E-31 1.7E-35 251.5 19.8 250 65-354 12-272 (408)
45 2wm5_A CYP124, putative cytoch 100.0 1.8E-30 6.2E-35 249.4 23.7 251 68-355 44-305 (435)
46 4fb2_A P450CIN; heme, monooxyg 100.0 9.3E-31 3.2E-35 248.7 20.5 244 67-356 18-264 (398)
47 3tkt_A Cytochrome P450; aromat 100.0 1.3E-30 4.4E-35 251.6 21.5 256 70-355 47-320 (450)
48 3tyw_A Putative cytochrome P45 100.0 3.2E-30 1.1E-34 246.5 23.9 244 67-355 28-280 (417)
49 2z36_A MOXA, cytochrome P450 t 100.0 1.1E-30 3.8E-35 249.3 19.9 261 47-355 5-276 (413)
50 2y5n_A MYCG, P-450-like protei 100.0 2.4E-30 8.3E-35 247.2 21.9 245 66-355 35-285 (417)
51 2xkr_A CYP142, putative cytoch 100.0 5.6E-30 1.9E-34 243.3 23.5 243 68-355 18-261 (398)
52 3a4g_A Vitamin D hydroxylase; 100.0 4.1E-30 1.4E-34 245.2 22.4 244 66-355 18-267 (411)
53 3ejb_B Biotin biosynthesis cyt 100.0 5.1E-30 1.7E-34 244.1 22.3 248 68-355 13-265 (404)
54 1q5d_A P450 epoxidase; cytochr 100.0 5E-30 1.7E-34 245.3 20.8 249 67-354 25-284 (419)
55 1z8o_A 6-deoxyerythronolide B 100.0 4.1E-30 1.4E-34 244.7 19.9 244 67-355 13-272 (404)
56 2z3t_A Cytochrome P450; monoxy 100.0 1.4E-29 4.8E-34 242.6 21.5 249 68-355 20-285 (425)
57 1gwi_A CYP154C1, cytochrome P4 100.0 1.4E-29 4.7E-34 241.6 21.3 244 66-354 15-272 (411)
58 2xbk_A PIMD protein; epoxidati 100.0 4.5E-29 1.5E-33 237.4 23.4 237 68-355 26-272 (404)
59 3nc3_A Cytochrome P450 CYPX; c 100.0 5.8E-30 2E-34 246.3 15.9 246 69-355 54-300 (441)
60 2uuq_A CYP130, cytochrome P450 100.0 2.6E-29 8.9E-34 239.9 19.8 245 68-355 25-281 (414)
61 3r9b_A Cytochrome P450 164A2; 100.0 1.4E-29 4.9E-34 242.0 18.0 251 67-355 28-287 (418)
62 3lxh_A Cytochrome P450; heme, 100.0 3.4E-29 1.2E-33 239.7 20.4 249 68-356 38-288 (421)
63 3mgx_A Putative P450 monooxyge 100.0 1.5E-29 5E-34 241.6 17.7 242 68-354 37-284 (415)
64 3oft_A Cytochrome P450, CYP101 100.0 1.6E-29 5.6E-34 240.0 17.6 242 67-355 23-265 (396)
65 3buj_A CALO2; heme, iron, meta 100.0 6E-29 2.1E-33 236.2 20.4 243 69-355 14-264 (397)
66 2dkk_A Cytochrome P450; CYP158 100.0 1.1E-29 3.8E-34 242.2 15.3 242 67-355 26-275 (411)
67 1lfk_A OXYB, P450 monooxygenas 100.0 4.3E-29 1.5E-33 237.3 15.5 236 74-355 19-267 (398)
68 1n40_A P450 MT2, cytochrome P4 100.0 1.9E-28 6.4E-33 232.7 16.4 240 67-355 15-264 (396)
69 3rwl_A Cytochrome P450 alkane 100.0 6.1E-27 2.1E-31 224.3 23.0 249 68-355 38-296 (426)
70 3p3o_A Cytochrome P450; monoox 99.9 4E-28 1.4E-32 231.8 10.0 245 68-355 33-284 (416)
71 2wiy_A XPLA-heme, cytochrome P 99.9 1.7E-26 5.8E-31 219.0 19.6 244 69-355 21-264 (394)
72 2rfb_A Cytochrome P450; heme, 99.9 1.2E-26 4E-31 216.1 16.1 220 79-358 2-222 (343)
73 3b4x_A 367AA long hypothetical 99.9 2.2E-26 7.4E-31 216.2 17.3 227 71-355 2-240 (367)
74 1io7_A Cytochrome P450 CYP119; 99.9 7.3E-26 2.5E-30 212.7 16.8 225 71-353 2-237 (368)
75 4dnj_A Putative cytochrome P45 99.9 9E-24 3.1E-28 201.4 18.8 257 55-354 18-281 (412)
76 4dxy_A Cytochrome P450, CYP101 99.9 1.6E-21 5.3E-26 185.9 24.8 251 68-358 37-289 (417)
77 2yjn_B Erycii, DTDP-4-keto-6-d 99.5 2.5E-16 8.5E-21 147.5 -8.5 205 50-354 35-252 (381)
78 2diu_A KIAA0430 protein; struc 79.9 4 0.00014 29.2 5.5 62 58-120 12-77 (96)
79 2krb_A Eukaryotic translation 76.5 12 0.00041 25.2 7.3 58 59-116 5-74 (81)
80 3lqv_A PRE-mRNA branch site pr 74.2 14 0.00048 26.8 7.6 64 50-115 3-73 (115)
81 1s79_A Lupus LA protein; RRM, 71.7 12 0.00041 26.8 6.5 57 59-117 15-79 (103)
82 1iqt_A AUF1, heterogeneous nuc 71.7 11 0.00038 24.8 6.0 46 71-116 13-67 (75)
83 2mss_A Protein (musashi1); RNA 69.2 15 0.00051 24.1 6.2 47 71-117 13-68 (75)
84 2nlw_A Eukaryotic translation 61.8 22 0.00077 25.3 6.3 61 57-117 17-89 (105)
85 3s8s_A Histone-lysine N-methyl 59.1 46 0.0016 23.9 7.7 50 58-109 9-67 (110)
86 3ns6_A Eukaryotic translation 58.3 30 0.001 24.3 6.4 58 58-115 9-80 (100)
87 4f25_A Polyadenylate-binding p 58.1 19 0.00065 26.2 5.4 57 59-117 9-73 (115)
88 1whx_A Hypothetical protein ri 54.1 53 0.0018 23.6 7.3 58 59-118 14-75 (111)
89 4fxv_A ELAV-like protein 1; RN 52.5 27 0.00093 24.6 5.3 56 59-116 23-88 (99)
90 2dnz_A Probable RNA-binding pr 51.8 54 0.0018 22.4 6.8 60 58-119 8-77 (95)
91 2kxn_B Transformer-2 protein h 50.6 74 0.0025 23.6 8.4 59 57-117 48-116 (129)
92 2adc_A Polypyrimidine tract-bi 49.9 53 0.0018 27.1 7.6 58 59-118 38-101 (229)
93 1whw_A Hypothetical protein ri 49.7 49 0.0017 22.8 6.4 57 59-117 12-78 (99)
94 3ex7_B RNA-binding protein 8A; 49.6 62 0.0021 23.6 7.2 59 58-118 25-93 (126)
95 2kvi_A Nuclear polyadenylated 49.2 56 0.0019 22.5 6.6 58 59-118 14-74 (96)
96 1p27_B RNA-binding protein 8A; 49.2 49 0.0017 23.2 6.4 57 59-117 27-93 (106)
97 2dgx_A KIAA0430 protein; RRM d 49.1 25 0.00086 24.4 4.7 60 58-117 12-80 (96)
98 2hvz_A Splicing factor, argini 48.8 45 0.0015 23.2 6.1 57 60-118 5-66 (101)
99 3beg_B Splicing factor, argini 47.6 46 0.0016 24.1 6.0 58 59-118 20-80 (115)
100 1x5u_A Splicing factor 3B subu 47.0 70 0.0024 22.3 8.2 59 58-118 18-86 (105)
101 2dnm_A SRP46 splicing factor; 46.6 56 0.0019 22.8 6.3 59 58-118 16-84 (103)
102 3mdf_A Peptidyl-prolyl CIS-tra 45.9 61 0.0021 21.5 6.2 51 57-109 9-68 (85)
103 1nu4_A U1A RNA binding domain; 45.8 30 0.001 23.9 4.6 58 58-115 11-77 (97)
104 2pe8_A Splicing factor 45; RRM 45.7 23 0.00077 25.5 4.0 66 53-118 6-85 (105)
105 3d2w_A TAR DNA-binding protein 45.6 40 0.0014 23.1 5.2 48 57-106 13-64 (89)
106 2la6_A RNA-binding protein FUS 45.3 73 0.0025 22.0 6.9 57 58-116 16-90 (99)
107 4a8x_A RNA-binding protein wit 44.7 59 0.002 21.7 6.0 57 59-117 8-75 (88)
108 2cqc_A Arginine/serine-rich sp 44.5 71 0.0024 21.7 6.5 55 53-109 13-76 (95)
109 2a3j_A U1 small nuclear ribonu 44.5 75 0.0026 23.6 6.9 61 58-118 32-101 (127)
110 2dgs_A DAZ-associated protein 43.9 76 0.0026 21.8 7.4 59 58-118 13-80 (99)
111 3ucg_A Polyadenylate-binding p 43.4 31 0.0011 23.3 4.3 47 71-117 20-75 (89)
112 2fy1_A RNA-binding motif prote 43.3 67 0.0023 23.2 6.4 58 59-118 11-77 (116)
113 2do4_A Squamous cell carcinoma 42.8 80 0.0028 21.7 6.8 58 57-116 19-85 (100)
114 2cq3_A RNA-binding protein 9; 42.7 69 0.0024 22.3 6.3 59 57-117 17-83 (103)
115 2wbr_A GW182, gawky, LD47780P; 42.7 53 0.0018 22.9 5.3 52 56-109 8-62 (89)
116 2cqi_A Nucleolysin TIAR; RNA r 42.7 52 0.0018 22.9 5.6 57 58-116 18-82 (103)
117 3s6e_A RNA-binding protein 39; 42.2 40 0.0014 24.7 4.9 68 51-118 3-84 (114)
118 3s7r_A Heterogeneous nuclear r 41.8 34 0.0012 23.0 4.3 53 58-112 14-75 (87)
119 1oo0_B CG8781-PA, drosophila Y 41.8 59 0.002 23.0 5.8 55 59-115 30-94 (110)
120 2jwn_A Embryonic polyadenylate 41.6 37 0.0013 24.8 4.8 57 59-117 40-105 (124)
121 2d9o_A DNAJ (HSP40) homolog, s 41.6 70 0.0024 22.6 6.0 47 71-118 31-81 (100)
122 2jrs_A RNA-binding protein 39; 41.6 83 0.0028 22.3 6.6 57 59-117 30-96 (108)
123 1p1t_A Cleavage stimulation fa 41.3 68 0.0023 22.3 6.0 49 59-109 12-69 (104)
124 1sjq_A Polypyrimidine tract-bi 40.8 86 0.0029 22.5 6.4 51 57-109 18-71 (105)
125 1sjr_A Polypyrimidine tract-bi 40.7 77 0.0026 24.9 6.6 49 59-109 50-103 (164)
126 2dnr_A Synaptojanin-1; RRM dom 40.2 60 0.002 22.8 5.2 48 70-117 28-76 (91)
127 2jvo_A Nucleolar protein 3; nu 40.1 53 0.0018 23.4 5.3 56 59-116 35-92 (108)
128 2cqd_A RNA-binding region cont 39.6 62 0.0021 23.2 5.7 58 58-117 20-86 (116)
129 1x4g_A Nucleolysin TIAR; struc 39.6 78 0.0027 22.3 6.2 57 59-117 29-89 (109)
130 2dgv_A HnRNP M, heterogeneous 39.5 85 0.0029 21.1 7.4 58 59-118 12-77 (92)
131 2ytc_A PRE-mRNA-splicing facto 39.3 81 0.0028 20.8 7.2 51 57-109 14-67 (85)
132 2div_A TRNA selenocysteine ass 39.3 91 0.0031 21.4 6.7 60 57-118 11-81 (99)
133 3md1_A Nuclear and cytoplasmic 39.0 49 0.0017 21.8 4.8 46 71-116 15-70 (83)
134 2cpf_A RNA binding motif prote 38.7 79 0.0027 21.7 6.0 58 58-117 8-78 (98)
135 1uaw_A Mouse-musashi-1; RNP-ty 38.7 32 0.0011 22.4 3.7 55 60-116 5-68 (77)
136 2ywk_A Putative RNA-binding pr 38.6 45 0.0015 22.8 4.6 56 58-115 19-83 (95)
137 2rs2_A Musashi-1, RNA-binding 38.6 59 0.002 23.2 5.4 57 57-115 27-92 (109)
138 3bs9_A Nucleolysin TIA-1 isofo 38.0 48 0.0016 22.2 4.6 49 59-109 10-67 (87)
139 2lea_A Serine/arginine-rich sp 38.0 1E+02 0.0036 22.9 6.9 58 58-117 50-117 (135)
140 2kn4_A Immunoglobulin G-bindin 37.4 1.2E+02 0.004 23.1 7.4 58 59-118 74-141 (158)
141 1wg5_A Heterogeneous nuclear r 36.9 68 0.0023 22.5 5.5 58 59-118 19-85 (104)
142 3v4m_A Splicing factor U2AF 65 36.7 69 0.0024 22.8 5.4 48 71-118 29-88 (105)
143 2cph_A RNA binding motif prote 36.6 1.1E+02 0.0036 21.3 8.6 60 57-118 17-88 (107)
144 2i2y_A Fusion protein consists 36.5 1.3E+02 0.0046 22.5 7.9 59 58-118 76-139 (150)
145 2cq4_A RNA binding motif prote 36.4 37 0.0013 24.3 4.0 51 59-111 29-88 (114)
146 1m46_B IQ4, IQ4 motif from MYO 36.1 26 0.0009 17.3 1.9 12 345-356 8-19 (26)
147 3p5t_L Cleavage and polyadenyl 36.0 61 0.0021 22.0 4.9 58 59-118 5-74 (90)
148 1x4c_A Splicing factor, argini 35.7 1.1E+02 0.0037 21.6 6.4 49 59-109 19-69 (108)
149 1x4b_A Heterogeneous nuclear r 35.6 38 0.0013 24.4 3.9 57 59-117 31-96 (116)
150 2dh8_A DAZ-associated protein 35.4 71 0.0024 22.3 5.3 58 58-117 19-85 (105)
151 2la4_A Nuclear and cytoplasmic 35.2 90 0.0031 21.5 5.8 49 59-109 31-82 (101)
152 2e5j_A Methenyltetrahydrofolat 35.1 1.1E+02 0.0037 21.0 6.8 57 59-117 23-84 (97)
153 1x5p_A Negative elongation fac 34.5 96 0.0033 21.2 5.9 55 58-116 18-76 (97)
154 2xnq_A Nuclear polyadenylated 34.3 1.1E+02 0.0037 21.1 6.1 49 59-109 26-76 (97)
155 1wi8_A EIF-4B, eukaryotic tran 33.6 82 0.0028 21.9 5.4 58 57-117 17-84 (104)
156 2d9p_A Polyadenylate-binding p 33.5 1.2E+02 0.004 21.0 6.6 63 54-118 14-84 (103)
157 2dhg_A TRNA selenocysteine ass 33.3 1.2E+02 0.0041 21.0 8.1 64 53-118 7-81 (104)
158 3ulh_A THO complex subunit 4; 33.3 83 0.0028 22.0 5.4 56 58-115 32-96 (107)
159 1x4e_A RNA binding motif, sing 32.9 58 0.002 21.6 4.3 51 57-109 7-66 (85)
160 2e5h_A Zinc finger CCHC-type a 32.8 1.1E+02 0.0039 20.5 6.6 51 57-109 18-77 (94)
161 3ue2_A Poly(U)-binding-splicin 32.8 63 0.0021 23.7 4.7 64 55-118 20-100 (118)
162 2cpd_A Apobec-1 stimulating pr 32.4 1E+02 0.0036 21.1 5.8 57 58-116 18-78 (99)
163 2voo_A Lupus LA protein; RNA-b 32.4 53 0.0018 26.5 4.6 57 59-117 113-177 (193)
164 2cpz_A CUG triplet repeat RNA- 32.4 1.1E+02 0.0036 21.8 6.0 58 58-117 28-95 (115)
165 2kt5_A RNA and export factor-b 31.5 1.2E+02 0.004 22.0 6.2 57 59-117 39-104 (124)
166 2dit_A HIV TAT specific factor 31.5 80 0.0027 22.5 5.1 68 51-118 11-93 (112)
167 1whv_A Poly(A)-specific ribonu 31.3 64 0.0022 23.0 4.1 38 71-108 29-67 (100)
168 1h2v_Z 20 kDa nuclear CAP bind 30.3 79 0.0027 24.1 5.2 58 58-117 42-109 (156)
169 1rk8_A CG8781-PA, CG8781-PA pr 29.9 99 0.0034 23.9 5.8 57 59-117 76-142 (165)
170 3n9u_C Cleavage and polyadenyl 29.6 98 0.0033 23.8 5.6 45 71-115 69-125 (156)
171 1x4d_A Matrin 3; structural ge 29.4 92 0.0032 22.1 5.0 56 53-109 13-71 (102)
172 1x5s_A Cold-inducible RNA-bind 29.4 1.4E+02 0.0047 20.5 8.1 60 57-118 14-83 (102)
173 1ufw_A Synaptojanin 2; RNP dom 29.3 96 0.0033 21.9 4.8 48 70-117 37-85 (95)
174 2cpj_A Non-POU domain-containi 29.2 1.1E+02 0.0039 20.9 5.5 59 58-118 18-80 (99)
175 1u6f_A Tcubp1, RNA-binding pro 28.8 1.3E+02 0.0045 22.2 6.2 57 59-117 46-112 (139)
176 2cpi_A CCR4-NOT transcription 28.8 28 0.00094 25.1 2.1 59 57-117 17-91 (111)
177 2bz2_A Negative elongation fac 28.8 73 0.0025 23.3 4.5 56 58-117 42-101 (121)
178 1x4h_A RNA-binding protein 28; 28.6 1.5E+02 0.0052 20.7 7.9 52 57-110 17-77 (111)
179 2cq0_A Eukaryotic translation 28.5 44 0.0015 23.4 3.1 50 58-109 18-76 (103)
180 2e5g_A U6 snRNA-specific termi 28.5 1.1E+02 0.0038 20.7 5.3 57 59-117 12-72 (94)
181 1jmt_A Splicing factor U2AF 35 28.5 1E+02 0.0034 21.8 5.1 46 73-118 42-97 (104)
182 2err_A Ataxin-2-binding protei 28.2 78 0.0027 22.4 4.5 56 59-116 33-96 (109)
183 2qfj_A FBP-interacting repress 28.0 1.5E+02 0.0053 23.5 6.9 49 59-109 32-89 (216)
184 2hzc_A Splicing factor U2AF 65 27.9 1.3E+02 0.0045 19.8 5.8 54 59-114 10-77 (87)
185 2x1f_A MRNA 3'-END-processing 27.7 1.4E+02 0.005 20.2 6.1 49 59-109 6-63 (96)
186 2ad9_A Polypyrimidine tract-bi 27.3 1.5E+02 0.0051 21.7 6.0 50 57-108 33-85 (119)
187 2dnq_A RNA-binding protein 4B; 27.2 1.4E+02 0.0049 19.9 7.3 59 58-118 11-71 (90)
188 2dnp_A RNA-binding protein 14; 27.0 1.4E+02 0.0049 19.9 7.6 59 57-117 11-71 (90)
189 2j76_E EIF-4B, EIF4B, eukaryot 27.0 84 0.0029 21.8 4.4 56 59-117 23-88 (100)
190 3zzy_A Polypyrimidine tract-bi 27.0 81 0.0028 23.7 4.4 50 58-109 31-85 (130)
191 1x4a_A Splicing factor, argini 26.9 1.6E+02 0.0056 20.5 6.9 57 59-117 26-89 (109)
192 2dis_A Unnamed protein product 26.9 1.6E+02 0.0055 20.4 7.1 49 59-109 12-71 (109)
193 2dgo_A Cytotoxic granule-assoc 26.5 1.5E+02 0.0051 20.9 5.9 58 58-117 18-85 (115)
194 2cqb_A Peptidyl-prolyl CIS-tra 26.4 1.5E+02 0.0053 20.2 5.8 62 54-117 11-82 (102)
195 2f3j_A RNA and export factor b 26.4 2.3E+02 0.008 22.1 7.6 47 71-117 102-157 (177)
196 1qm9_A Polypyrimidine tract-bi 26.2 1.5E+02 0.0052 23.2 6.5 59 59-118 7-70 (198)
197 1l3k_A Heterogeneous nuclear r 25.6 85 0.0029 24.7 4.8 57 59-117 108-173 (196)
198 2jvr_A Nucleolar protein 3; RN 25.5 1.8E+02 0.0061 20.9 6.0 57 59-117 32-95 (111)
199 1l3k_A Heterogeneous nuclear r 25.1 1E+02 0.0034 24.2 5.1 57 58-116 16-81 (196)
200 1x5t_A Splicing factor 3B subu 25.1 1.2E+02 0.004 20.6 4.9 57 59-117 9-76 (96)
201 1fxl_A Paraneoplastic encephal 24.8 1.2E+02 0.004 22.9 5.4 56 59-116 6-71 (167)
202 2dnh_A Bruno-like 5, RNA bindi 24.1 1.8E+02 0.0061 20.0 6.1 50 58-109 18-75 (105)
203 1wf1_A RNA-binding protein RAL 24.0 1.9E+02 0.0064 20.2 6.1 59 58-117 30-90 (110)
204 1wf0_A TDP-43, TAR DNA-binding 23.5 87 0.003 20.9 3.9 47 59-107 9-59 (88)
205 1why_A Hypothetical protein ri 23.5 1.8E+02 0.006 19.7 9.0 57 57-115 19-79 (97)
206 2cpe_A RNA-binding protein EWS 23.5 1.1E+02 0.0038 21.6 4.7 57 59-117 19-93 (113)
207 2ku7_A MLL1 PHD3-CYP33 RRM chi 23.1 2.2E+02 0.0076 20.7 7.0 49 59-109 67-124 (140)
208 2dgp_A Bruno-like 4, RNA bindi 23.1 1.9E+02 0.0065 19.9 6.9 50 58-109 16-74 (106)
209 3r27_A HnRNP L, heterogeneous 23.1 2E+02 0.0069 20.3 6.1 54 54-109 20-76 (100)
210 2dgt_A RNA-binding protein 30; 22.6 1.8E+02 0.0061 19.5 6.8 57 58-116 13-71 (92)
211 2ki2_A SS-DNA binding protein 22.6 1.1E+02 0.0036 20.5 4.2 46 71-117 15-70 (90)
212 2xs2_A Deleted in azoospermia- 22.5 43 0.0015 23.4 2.1 56 59-117 13-76 (102)
213 2cpx_A Hypothetical protein FL 22.5 1.7E+02 0.0057 20.6 5.5 60 57-118 27-96 (115)
214 2cjk_A Nuclear polyadenylated 22.5 1.2E+02 0.0041 22.9 5.0 57 59-117 91-156 (167)
215 2dng_A Eukaryotic translation 22.3 1.1E+02 0.0039 21.1 4.4 62 53-117 13-83 (103)
216 1d8j_A General transcription f 21.4 45 0.0015 22.8 1.8 37 306-347 29-66 (81)
217 3pgw_S U1-70K; protein-RNA com 21.4 1.8E+02 0.006 26.9 6.5 59 57-117 104-172 (437)
218 3q2s_C Cleavage and polyadenyl 20.9 1.4E+02 0.0046 24.8 5.2 49 59-109 72-131 (229)
219 2dha_A FLJ20171 protein; RRM d 20.7 1.1E+02 0.0039 22.4 4.2 54 59-114 27-92 (123)
220 3md3_A Nuclear and cytoplasmic 20.6 1.2E+02 0.0042 22.7 4.6 46 71-116 14-68 (166)
221 4f02_A Polyadenylate-binding p 20.5 1.4E+02 0.0048 24.1 5.2 55 54-110 14-77 (213)
222 2khc_A Testis-specific RNP-typ 20.4 91 0.0031 22.3 3.6 49 59-109 44-101 (118)
223 2cq1_A PTB-like protein L; RRM 20.2 1.7E+02 0.0058 20.5 4.9 50 57-108 17-69 (101)
224 1wex_A Hypothetical protein (r 20.0 2.3E+02 0.008 19.8 6.4 50 57-108 17-69 (104)
No 1
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A*
Probab=100.00 E-value=3e-50 Score=393.61 Aligned_cols=321 Identities=24% Similarity=0.335 Sum_probs=254.9
Q ss_pred CCCCCCCCCCCcccccccCCC--CchHHHHHHHHHHhCCceEEecCCccEEEeCCHHHHHHHHHhCCCccCCCCCccccc
Q 045796 47 APPLPPGPRGLPLVGYLPFLG--TDLYKSLTKLADAYGPIYKFWLANKLFVVVSSSSIAKEMVRDKDTIFSNRQTTVATL 124 (378)
Q Consensus 47 ~~~~~PgP~~~p~lG~~~~l~--~~~~~~~~~~~~~yG~i~~~~~g~~~~v~v~dpe~i~~vl~~~~~~f~~r~~~~~~~ 124 (378)
..+.||||+++|++||++++. +.++..+.+|+++|||||++++|+.++|+|+||++++++|.+++..|++|+......
T Consensus 6 ~~~~PPgP~~lPliGnl~~l~~~~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~~k~il~~~~~~f~~rp~~~~~~ 85 (494)
T 3swz_A 6 GAKYPKSLLSLPLVGSLPFLPRHGHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQMATLD 85 (494)
T ss_dssp ------CCBCCCEEEEESSCTTSSCHHHHHHHTHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTBBCCCCHHHH
T ss_pred CCCCCCCCCCCCeEcchHHhCCCCchhHHHHHHHHHcCCEEEEEeCCCCEEEECCHHHHHHHHHhCcHhhCCCCCcHHHH
Confidence 456899999999999999984 367899999999999999999999999999999999999999988999888764444
Q ss_pred ccccCCCceeeCCCCchHHHHHHHHHHhhcCc--chhhhhHHHHHHHHHHHHHHHHhccCCCCcchHHhHHHHHHHHHHH
Q 045796 125 TPTLGGNDIVFSPYGAQWRRLRKAMVGEMMTN--SSLDSCSALRKQVLKNTIRDLYNNKIGKPVDIGELSVSTSVNALEN 202 (378)
Q Consensus 125 ~~~~~~~~~~~~~~g~~w~~~Rk~l~~~~fs~--~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~d~~~~~~~~t~dii~~ 202 (378)
....++.|++++.+|+.|+++||++. +.|+. ..+..+.+.++++++.+++.+.+. .++++|+..++.++++|+|+.
T Consensus 86 ~~~~~~~gl~~~~~g~~wr~~Rr~~~-~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~-~~~~vd~~~~~~~~t~dvi~~ 163 (494)
T 3swz_A 86 IASNNRKGIAFADSGAHWQLHRRLAM-ATFALFKDGDQKLEKIICQEISTLCDMLATH-NGQSIDISFPVFVAVTNVISL 163 (494)
T ss_dssp HHTTTTCSSSSSCSSHHHHHHHHHHH-HHTTTTSSSTTCHHHHHHHHHHHHHHHHHHT-TTEEECCHHHHHHHHHHHHHH
T ss_pred HhccCCCCeEeCCCCHHHHHHHHHHH-HHHHHhcchHHHHHHHHHHHHHHHHHHHHHc-CCCcccHHHHHHHHHHHHHHH
Confidence 33334567777778999999999985 78874 557889999999999999999764 356899999999999999999
Q ss_pred HHhcCCCCCCCCcchhHHHHHHHHHHHHHhCCCCcccccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhCC
Q 045796 203 MLWGGGTGSGAHKDHTLEMKQLLDDIMELQGVPNISDIFPVLSRFDLQGVERKCKEIALWVEKIFNSAIEKRKNLIAKGT 282 (378)
Q Consensus 203 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~ 282 (378)
++||.+++ ..+ +....+....+.+........+.+++|++++++. ...+++....+.+++++.++++++++..
T Consensus 164 ~~fG~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~p~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~---- 236 (494)
T 3swz_A 164 ICFNTSYK-NGD-PELNVIQNYNEGIIDNLSKDSLVDLVPWLKIFPN-KTLEKLKSHVKIRNDLLNKILENYKEKF---- 236 (494)
T ss_dssp HHHSCCCC-TTC-THHHHHHHHHHHHHHHHCSSSSCCSSCGGGTSCC-SHHHHHHHHHHHHHHHHHHHHHHHTTTC----
T ss_pred HHcCCcCC-CCC-HHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCc-HHHHHHHHHHHHHHHHHHHHHHHHHHhh----
Confidence 99999883 322 2233444444444544454556677898887763 2345566666777888888887775532
Q ss_pred CCCCCCCCcHHHHHHhccccCC--------CCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcCchHHHHHHHHH
Q 045796 283 LKFDGRNKDFLQTFIEMLDSED--------SSISLNRTELIALLLDIILGGTDTTTTIMEWTLTKLLQFPVEMKKVQAEL 354 (378)
Q Consensus 283 ~~~~~~~~dll~~ll~~~~~~~--------~~~~l~~~ei~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~iq~kl~~Ei 354 (378)
. .....|+++.|++...+.+ ++..+++++|.+++.++++||+||||++|+|++++|++||++|+|+|+||
T Consensus 237 -~-~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei 314 (494)
T 3swz_A 237 -R-SDSITNMLDTLMQAKMNSDNGNAGPDQDSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEI 314 (494)
T ss_dssp -C-TTCCCSHHHHHHHHHHTSCCC----CCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred -c-ccchhHHHHHHHHHHHhhhcccccccccccccCHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence 1 2346799999998642210 12358999999999999999999999999999999999999999999999
Q ss_pred HHhhCCCCCcccCCCCCCcCccCC
Q 045796 355 AEVVGLNNNVEESHLPKLKCLDAT 378 (378)
Q Consensus 355 ~~~~~~~~~~~~~~l~~LpYL~av 378 (378)
++++|.++.++++|+.+||||+||
T Consensus 315 ~~v~~~~~~~~~~~~~~lpyl~a~ 338 (494)
T 3swz_A 315 DQNVGFSRTPTISDRNRLLLLEAT 338 (494)
T ss_dssp HHHTCSSSCCCGGGGGTCHHHHHH
T ss_pred HHhcCCCCCCCHHHHhcCHHHHHH
Confidence 999998788999999999999986
No 2
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens}
Probab=100.00 E-value=6.8e-50 Score=392.12 Aligned_cols=324 Identities=21% Similarity=0.316 Sum_probs=240.6
Q ss_pred CCCCCCCCCCCCcccccccCCCCchHHHHHHHHHHhCCceEEecCCccEEEeCCHHHHHHHHHhCCCccCCCCCcccccc
Q 045796 46 TAPPLPPGPRGLPLVGYLPFLGTDLYKSLTKLADAYGPIYKFWLANKLFVVVSSSSIAKEMVRDKDTIFSNRQTTVATLT 125 (378)
Q Consensus 46 ~~~~~~PgP~~~p~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~v~dpe~i~~vl~~~~~~f~~r~~~~~~~~ 125 (378)
++.+.||||+++|++||++.++++++..+.+|+++||+||++++|+.+.|+|+||+++++||.+++..|.+|+.......
T Consensus 6 ~~~~~pPgP~~~P~iG~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~~~ 85 (507)
T 3pm0_A 6 SSKGKPPGPFAWPLIGNAAAVGQAAHLSFARLARRYGDVFQIRLGSCPIVVLNGERAIHQALVQQGSAFADRPSFASFRV 85 (507)
T ss_dssp ----------------------CCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTSCBCCCCHHHHH
T ss_pred CCCCCCcCCCCCCeeCchhhcCccHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCcchHHHh
Confidence 34578999999999999999987889999999999999999999999999999999999999988888988876543332
Q ss_pred cccCCCceeeCCCCchHHHHHHHHHHhhcCcchh------hhhHHHHHHHHHHHHHHHHhcc-CCCCcchHHhHHHHHHH
Q 045796 126 PTLGGNDIVFSPYGAQWRRLRKAMVGEMMTNSSL------DSCSALRKQVLKNTIRDLYNNK-IGKPVDIGELSVSTSVN 198 (378)
Q Consensus 126 ~~~~~~~~~~~~~g~~w~~~Rk~l~~~~fs~~~l------~~~~~~~~~~~~~l~~~l~~~~-~~~~~d~~~~~~~~t~d 198 (378)
.. ++.+++++.+|+.|+++||++. +.|+.... +.+.+.+.++++++++.+.+.. ++.++|+.+++.++++|
T Consensus 86 ~~-~g~~l~~~~~g~~w~~~R~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~d 163 (507)
T 3pm0_A 86 VS-GGRSMAFGHYSEHWKVQRRAAH-SMMRNFFTRQPRSRQVLEGHVLSEARELVALLVRGSADGAFLDPRPLTVVAVAN 163 (507)
T ss_dssp GG-GGTCSSSSCSSHHHHHHHHHHH-HHHHHSTTSSTTHHHHHHHHHHHHHHHHHHHHHHTTGGGCCBCCHHHHHHHHHH
T ss_pred hc-CCCceEECCCChHHHHHHHHHH-HHHHHhcCCccchHHHHHHHHHHHHHHHHHHHHhhcccCCCcChHHHHHHHHHH
Confidence 22 3456767778999999999985 66654333 3389999999999999998653 45789999999999999
Q ss_pred HHHHHHhcCCCCCCCCcchhHHHHHHHHHHHHHhCCCCcccccccccccCcc--chHHHHHHHHHHHHHHHHHHHHHHHH
Q 045796 199 ALENMLWGGGTGSGAHKDHTLEMKQLLDDIMELQGVPNISDIFPVLSRFDLQ--GVERKCKEIALWVEKIFNSAIEKRKN 276 (378)
Q Consensus 199 ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~r~~ 276 (378)
+++.++||.+++ ..+ +...++.+.+...+.......+..++|++++++.. +..+++.+..+.+.+++.+.++++++
T Consensus 164 vi~~~~fG~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~lp~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 241 (507)
T 3pm0_A 164 VMSAVCFGCRYS-HDD-PEFRELLSHNEEFGRTVGAGSLVDVMPWLQYFPNPVRTVFREFEQLNRNFSNFILDKFLRHCE 241 (507)
T ss_dssp HHHHHHTSCCCC-TTC-HHHHHHTSCHHHHHHHHSTTCCTTTCGGGGGSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHccccCC-CCC-HHHHHHHHHHHHHHHhcccchHHHHhHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999983 332 23344445555555555544456678888777532 13456666777888889999988876
Q ss_pred hhhhCCCCCCCCCCcHHHHHHhccccCCC------CCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcCchHHHHH
Q 045796 277 LIAKGTLKFDGRNKDFLQTFIEMLDSEDS------SISLNRTELIALLLDIILGGTDTTTTIMEWTLTKLLQFPVEMKKV 350 (378)
Q Consensus 277 ~~~~~~~~~~~~~~dll~~ll~~~~~~~~------~~~l~~~ei~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~iq~kl 350 (378)
.. + . +....|+++.|++..++..+ +..+++++|.+++.++++||+|||+++|+|++|+|++||++|+||
T Consensus 242 ~~--~--~-~~~~~d~l~~ll~~~~~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl 316 (507)
T 3pm0_A 242 SL--R--P-GAAPRDMMDAFILSAEKKAAGDSHGGGARLDLENVPATITDIFGASQDTLSTALQWLLLLFTRYPDVQTRV 316 (507)
T ss_dssp HC--C--T-TCCCCSHHHHHHHHHHHHHSCC----CCCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred cc--c--c-ccCCccHHHHHHHHhhhhccccccCCCCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHH
Confidence 54 1 1 24568999999965431101 225899999999999999999999999999999999999999999
Q ss_pred HHHHHHhhCCCCCcccCCCCCCcCccCC
Q 045796 351 QAELAEVVGLNNNVEESHLPKLKCLDAT 378 (378)
Q Consensus 351 ~~Ei~~~~~~~~~~~~~~l~~LpYL~av 378 (378)
|+||++++++++.++++++++||||+||
T Consensus 317 ~~Ei~~~~~~~~~~~~~~l~~lpyl~av 344 (507)
T 3pm0_A 317 QAELDQVVGRDRLPCMGDQPNLPYVLAF 344 (507)
T ss_dssp HHHHHHHTCTTSCCCGGGGGGCHHHHHH
T ss_pred HHHHHHhcCCCCCCChhhcccChHHHHH
Confidence 9999999987778899999999999986
No 3
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens}
Probab=100.00 E-value=4.4e-48 Score=378.48 Aligned_cols=321 Identities=21% Similarity=0.285 Sum_probs=249.7
Q ss_pred CCCCCCCCCCCcccccccCCCCchHHHHHHHHHHhCCceEEecCCccEEEeCCHHHHHHHHHhCCCccCCCCCccccccc
Q 045796 47 APPLPPGPRGLPLVGYLPFLGTDLYKSLTKLADAYGPIYKFWLANKLFVVVSSSSIAKEMVRDKDTIFSNRQTTVATLTP 126 (378)
Q Consensus 47 ~~~~~PgP~~~p~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~v~dpe~i~~vl~~~~~~f~~r~~~~~~~~~ 126 (378)
..+.+|||+++|++||++.+.++++..+.+|+++||||+++++|+.++|+++||+++++||.+++..|++++........
T Consensus 14 ~lp~~PgP~~~p~~G~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~i~~il~~~~~~f~~r~~~~~~~~~ 93 (495)
T 2hi4_A 14 GLKSPPEPWGWPLLGHVLTLGKNPHLALSRMSQRYGDVLQIRIGSTPVLVLSRLDTIRQALVRQGDDFKGRPDLYTSTLI 93 (495)
T ss_dssp TCBCCCCCCCBTTTBTHHHHTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTGGGSCBCCCCHHHHTS
T ss_pred CCCCCCCCCCCcceeeHHhcCccHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhcchhhCCCCCcHHHHHh
Confidence 34556999999999999888667899999999999999999999999999999999999998877678877654322222
Q ss_pred ccCCCceeeC-CCCchHHHHHHHHHHhhcC---cchh---h---hhHHHHHHHHHHHHHHHHhcc-CCCCcchHHhHHHH
Q 045796 127 TLGGNDIVFS-PYGAQWRRLRKAMVGEMMT---NSSL---D---SCSALRKQVLKNTIRDLYNNK-IGKPVDIGELSVST 195 (378)
Q Consensus 127 ~~~~~~~~~~-~~g~~w~~~Rk~l~~~~fs---~~~l---~---~~~~~~~~~~~~l~~~l~~~~-~~~~~d~~~~~~~~ 195 (378)
. ++.+++++ .+|+.|+++||++. ++|+ ..++ + .+++.++++++++++.|.+.+ +++++|+.+++.++
T Consensus 94 ~-~~~~l~~~~~~g~~w~~~Rr~~~-~~f~~~s~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~~d~~~~~~~~ 171 (495)
T 2hi4_A 94 T-DGQSLTFSTDSGPVWAARRRLAQ-NALNTFSIASDPASSSSCYLEEHVSKEAKALISRLQELMAGPGHFDPYNQVVVS 171 (495)
T ss_dssp T-TSCCTTTSSCCSHHHHHHHHHHH-HHHHHTTTSBCSSCSSCBHHHHHHHHHHHHHHHHHHHHHHTTSCBCHHHHHHHH
T ss_pred c-CCCCEEEcCCCChHHHHHHHHHH-HHHHHhccCcccccchhhhHHHHHHHHHHHHHHHHHHhccCCCccchHHHHHHH
Confidence 1 34556665 46999999999986 6644 3333 2 789999999999999997632 46789999999999
Q ss_pred HHHHHHHHHhcCCCCCCCCcchhHHHHHHHHHHHHHhCCCCcccccccccccCccchHHHHHHHHHHHHHHHHHHHHHHH
Q 045796 196 SVNALENMLWGGGTGSGAHKDHTLEMKQLLDDIMELQGVPNISDIFPVLSRFDLQGVERKCKEIALWVEKIFNSAIEKRK 275 (378)
Q Consensus 196 t~dii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~ 275 (378)
++|+|++++||.+++ ..+ ++..++.+.+..++.......+..++|++++++. ...++..+..+.+.+++.++|++++
T Consensus 172 ~~dvi~~~~fG~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~lp~-~~~~~~~~~~~~~~~~~~~~i~~r~ 248 (495)
T 2hi4_A 172 VANVIGAMCFGQHFP-ESS-DEMLSLVKNTHEFVETASSGNPLDFFPILRYLPN-PALQRFKAFNQRFLWFLQKTVQEHY 248 (495)
T ss_dssp HHHHHHHHHHGGGSC-TTC-HHHHHHHTTTHHHHTTSSTTCGGGTCGGGGGSCC-HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCC-CCC-HHHHHHHHHHHHHHHhcccchHHHHhHHHHhcCc-hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999883 322 1233344444444443332234456788766652 2345566677788899999999887
Q ss_pred HhhhhCCCCCCCCCCcHHHHHHhcccc-C-CCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcCchHHHHHHHH
Q 045796 276 NLIAKGTLKFDGRNKDFLQTFIEMLDS-E-DSSISLNRTELIALLLDIILGGTDTTTTIMEWTLTKLLQFPVEMKKVQAE 353 (378)
Q Consensus 276 ~~~~~~~~~~~~~~~dll~~ll~~~~~-~-~~~~~l~~~ei~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~iq~kl~~E 353 (378)
+.. + ....+|+++.|++...+ + +++..+++++|++++.++++||+|||+++|+|++++|++||++|+|||+|
T Consensus 249 ~~~--~----~~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~E 322 (495)
T 2hi4_A 249 QDF--D----KNSVRDITGALFKHSKKGPRASGNLIPQEKIVNLVNDIFGAGFDTVTTAISWSLMYLVTKPEIQRKIQKE 322 (495)
T ss_dssp HTC--C----TTCCCSHHHHHHHHHHHCCEETTEECCTHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred Hhh--c----ccccccHHHHHHHHhhhccCccccCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhCHHHHHHHHHH
Confidence 643 1 22357999999964221 1 11236899999999999999999999999999999999999999999999
Q ss_pred HHHhhCCCCCcccCCCCCCcCccCC
Q 045796 354 LAEVVGLNNNVEESHLPKLKCLDAT 378 (378)
Q Consensus 354 i~~~~~~~~~~~~~~l~~LpYL~av 378 (378)
|++++|+++.++++++++||||+||
T Consensus 323 i~~v~~~~~~~~~~~~~~lpyl~av 347 (495)
T 2hi4_A 323 LDTVIGRERRPRLSDRPQLPYLEAF 347 (495)
T ss_dssp HHHHTTTSSCCCGGGSTTCHHHHHH
T ss_pred HHHhcCCCCCCChHHhccCHHHHHH
Confidence 9999997777899999999999985
No 4
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A*
Probab=100.00 E-value=1.4e-47 Score=373.58 Aligned_cols=320 Identities=22% Similarity=0.327 Sum_probs=250.4
Q ss_pred CCCCCCCCCCCcccccccCCCC-c--hHHHHHHHHHHhCCceEEecCCccEEEeCCHHHHHHHHHhCCCccCCCCCcccc
Q 045796 47 APPLPPGPRGLPLVGYLPFLGT-D--LYKSLTKLADAYGPIYKFWLANKLFVVVSSSSIAKEMVRDKDTIFSNRQTTVAT 123 (378)
Q Consensus 47 ~~~~~PgP~~~p~lG~~~~l~~-~--~~~~~~~~~~~yG~i~~~~~g~~~~v~v~dpe~i~~vl~~~~~~f~~r~~~~~~ 123 (378)
+.++||||+++|++||++.+.. . ++..+.+|+++||||+++++|+.+.++|+||+++++||.+++..|++++.....
T Consensus 10 ~~~lpPgP~~~p~~G~~~~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~~~~vl~~~~~~f~~~~~~~~~ 89 (481)
T 3czh_A 10 PMGFPPGPPGLPFIGNIYSLAASSELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPLF 89 (481)
T ss_dssp --CCCCCCCCBTTTBHHHHHHHCSSCHHHHHHHHHHHHCSEEEEEETTEEEEEEESHHHHHHHHTTTTTTTCBCCCCHHH
T ss_pred CCCCCCCCCCCcccccHhhcCcccCcHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhhchHhhCCCCCcHHH
Confidence 3468999999999999988732 2 789999999999999999999999999999999999999887778877643222
Q ss_pred cccccCCCceeeCCCCchHHHHHHHHHHhhcCcchh--hhhHHHHHHHHHHHHHHHHhccCCCCcchHHhHHHHHHHHHH
Q 045796 124 LTPTLGGNDIVFSPYGAQWRRLRKAMVGEMMTNSSL--DSCSALRKQVLKNTIRDLYNNKIGKPVDIGELSVSTSVNALE 201 (378)
Q Consensus 124 ~~~~~~~~~~~~~~~g~~w~~~Rk~l~~~~fs~~~l--~~~~~~~~~~~~~l~~~l~~~~~~~~~d~~~~~~~~t~dii~ 201 (378)
.... ++.|++++.+|+.|+++||++. ++|++..+ ..+++.++++++.+++.+... +++++|+.+++.++++|+++
T Consensus 90 ~~~~-~~~~~~~~~~g~~w~~~R~~~~-~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~-~~~~~d~~~~~~~~~~~vi~ 166 (481)
T 3czh_A 90 MKMT-KMGGLLNSRYGRGWVDHRRLAV-NSFRYFGYGQKSFESKILEETKFFNDAIETY-KGRPFDFKQLITNAVSNITN 166 (481)
T ss_dssp HHHH-TTCSSTTCCSSHHHHHHHHHHH-HHHHHTTTTSTTHHHHHHHHHHHHHHHHHTT-TTCCBCCHHHHHHHHHHHHH
T ss_pred Hhhc-CCCCeEeCCCChHHHHHHHHHH-HHHHHhcCChHHHHHHHHHHHHHHHHHHHHc-CCCCcCHHHHHHHHHHHHHH
Confidence 2221 2335556678999999999985 78886544 678999999999999999753 35689999999999999999
Q ss_pred HHHhcCCCCCCCCcchhHHHHHHHHHHHHHhCCCC--cccccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 045796 202 NMLWGGGTGSGAHKDHTLEMKQLLDDIMELQGVPN--ISDIFPVLSRFDLQGVERKCKEIALWVEKIFNSAIEKRKNLIA 279 (378)
Q Consensus 202 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~ 279 (378)
+++||.+++ ..+ ++..++.+.+...+....... +..++|++++++. ...++..+..+.+.+++.++|+++++..
T Consensus 167 ~~~fG~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~lp~-~~~~~~~~~~~~~~~~~~~~i~~r~~~~- 242 (481)
T 3czh_A 167 LIIFGERFT-YED-TDFQHMIELFSENVELAASASVFLYNAFPWIGILPF-GKHQQLFRNAAVVYDFLSRLIEKASVNR- 242 (481)
T ss_dssp HHHHSSCCC-TTC-HHHHHHHHHHHHHHHHTTSHHHHHHHHCGGGGGCSS-SHHHHHHHHHHHHHHHHHHHHHHHHTTC-
T ss_pred HHHcCCCCC-CCC-HHHHHHHHHHHHHHhhhccchhHHhhhhHHHHhCCc-hHHHHHHHHHHHHHHHHHHHHHHHHHhc-
Confidence 999999883 322 234445555555554333211 3345787765542 2345566677788889999998887643
Q ss_pred hCCCCCCCCCCcHHHHHHhccccC--CCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcCchHHHHHHHHHHHh
Q 045796 280 KGTLKFDGRNKDFLQTFIEMLDSE--DSSISLNRTELIALLLDIILGGTDTTTTIMEWTLTKLLQFPVEMKKVQAELAEV 357 (378)
Q Consensus 280 ~~~~~~~~~~~dll~~ll~~~~~~--~~~~~l~~~ei~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~iq~kl~~Ei~~~ 357 (378)
+ ....+|+++.|++...+. +++..++++||++++.++++||+|||+++|+|++|+|++||++|+|||+||+++
T Consensus 243 -~----~~~~~d~l~~ll~~~~~~~~~~~~~l~~~ei~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~ 317 (481)
T 3czh_A 243 -K----PQLPQHFVDAYLDEMDQGKNDPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLI 317 (481)
T ss_dssp -C----TTCCSSHHHHHHHHHHHTTTCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred -C----CCchHHHHHHHHHHHHhcccCccccccHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhChHHHHHHHHHHHHh
Confidence 1 234579999999764321 123469999999999999999999999999999999999999999999999999
Q ss_pred hCCCCCcccCCCCCCcCccCC
Q 045796 358 VGLNNNVEESHLPKLKCLDAT 378 (378)
Q Consensus 358 ~~~~~~~~~~~l~~LpYL~av 378 (378)
+|+++.++++++++||||+||
T Consensus 318 ~~~~~~~~~~~~~~lpyl~a~ 338 (481)
T 3czh_A 318 MGPNGKPSWDDKCKMPYTEAV 338 (481)
T ss_dssp TCSSSCCCGGGGGGCHHHHHH
T ss_pred cCCCCCCChhhhhhChHHHHH
Confidence 997778999999999999985
No 5
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A*
Probab=100.00 E-value=7e-47 Score=367.84 Aligned_cols=318 Identities=21% Similarity=0.356 Sum_probs=247.2
Q ss_pred CCCCCCCCCCCCcccccccCC-CCchHHHHHHHHHHhCCceEEecCCccEEEeCCHHHHHHHHHhCCCccCCCCCccccc
Q 045796 46 TAPPLPPGPRGLPLVGYLPFL-GTDLYKSLTKLADAYGPIYKFWLANKLFVVVSSSSIAKEMVRDKDTIFSNRQTTVATL 124 (378)
Q Consensus 46 ~~~~~~PgP~~~p~lG~~~~l-~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~v~dpe~i~~vl~~~~~~f~~r~~~~~~~ 124 (378)
++.++||||+++|++||++++ ..+++..+.+|+++||+|+++++|+.++|+|+||+++++||.+++..|++++......
T Consensus 7 ~~~~lpPgP~~~PliG~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~~~~v~~il~~~~~~f~~r~~~~~~~ 86 (476)
T 3e6i_A 7 SKGKLPPGPFPLPIIGNLFQLELKNIPKSFTRLAQRFGPVFTLYVGSQRMVVMHGYKAVKEALLDYKDEFSGRGDLPAFH 86 (476)
T ss_dssp ---CCCCCCCCBTTTBTGGGCCTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHTSTTTTCEECCCGGGG
T ss_pred CCCCCCcCCCCcccccChhhhccccHhHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhcchHhhCCCCCCchhh
Confidence 345789999999999999998 5678999999999999999999999999999999999999999887888876554333
Q ss_pred ccccCCCceeeCCCCchHHHHHHHHHHhhcCcchh--hhhHHHHHHHHHHHHHHHHhccCCCCcchHHhHHHHHHHHHHH
Q 045796 125 TPTLGGNDIVFSPYGAQWRRLRKAMVGEMMTNSSL--DSCSALRKQVLKNTIRDLYNNKIGKPVDIGELSVSTSVNALEN 202 (378)
Q Consensus 125 ~~~~~~~~~~~~~~g~~w~~~Rk~l~~~~fs~~~l--~~~~~~~~~~~~~l~~~l~~~~~~~~~d~~~~~~~~t~dii~~ 202 (378)
... ++ |++ ..+|+.|+++||... +.|+...+ ..+++.++++++.+++.+.+. .++++|+.+++.++++|+|++
T Consensus 87 ~~~-~~-~l~-~~~g~~w~~~Rr~~~-~~l~~~~~~~~~~~~~i~~~~~~l~~~l~~~-~~~~~d~~~~~~~~~~dvi~~ 161 (476)
T 3e6i_A 87 AHR-DR-GII-FNNGPTWKDIRRFSL-TTLRNYGMGKQGNESRIQREAHFLLEALRKT-QGQPFDPTFLIGCAPCNVIAD 161 (476)
T ss_dssp GGT-TS-SST-TCCSTTHHHHHHHHH-HHHHHTC-CCSHHHHHHHHHHHHHHHHHHTT-TTSCBCTHHHHTHHHHHHHHH
T ss_pred eec-CC-CEE-ecCCcHHHHHHHHHH-HHHHhcCCCchHHHHHHHHHHHHHHHHHHHh-CCCCcChHHHHHHHHHHHHHH
Confidence 322 22 444 456999999999764 66765443 457799999999999999754 367899999999999999999
Q ss_pred HHhcCCCCCCCCcchhHHHHHHHHHHHHHhCCCC--cccccc-cccccCccchHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 045796 203 MLWGGGTGSGAHKDHTLEMKQLLDDIMELQGVPN--ISDIFP-VLSRFDLQGVERKCKEIALWVEKIFNSAIEKRKNLIA 279 (378)
Q Consensus 203 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~P-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~ 279 (378)
++||.+++ ..+ +...++.+.+...+....... +...+| ++++++ +..++..+..+.+.+++.+.|+++++..
T Consensus 162 ~~fG~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~lp--~~~~~~~~~~~~~~~~~~~~i~~~~~~~- 236 (476)
T 3e6i_A 162 ILFRKHFD-YND-EKFLRLMYLFNENFHLLSTPWLQLYNNFPSFLHYLP--GSHRKVIKNVAEVKEYVSERVKEHHQSL- 236 (476)
T ss_dssp HHHSCCCC-TTC-HHHHHHHHHHHHHHHHTTSHHHHHHHHSHHHHTTSC--SHHHHHHHHHHHHHHHHHHHHHHHHHTC-
T ss_pred HHcCCCCC-CCC-HHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcC--cHHHHHHHHHHHHHHHHHHHHHHHhhcC-
Confidence 99999983 332 123445555555444332211 123355 444443 3345666677788889999998887653
Q ss_pred hCCCCCCCCCCcHHHHHHhccccC--CCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcCchHHHHHHHHHHHh
Q 045796 280 KGTLKFDGRNKDFLQTFIEMLDSE--DSSISLNRTELIALLLDIILGGTDTTTTIMEWTLTKLLQFPVEMKKVQAELAEV 357 (378)
Q Consensus 280 ~~~~~~~~~~~dll~~ll~~~~~~--~~~~~l~~~ei~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~iq~kl~~Ei~~~ 357 (378)
+ ....+|+++.|+....++ +.+..+++++|++++.++++||+|||+++|+|++|+|++||++|+|||+||+++
T Consensus 237 -~----~~~~~d~~~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~ 311 (476)
T 3e6i_A 237 -D----PNCPRDLTDCLLVEMEKEKHSAERLYTMDGITVTVADLFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRV 311 (476)
T ss_dssp -C----TTSCCSHHHHHHHHHHSSSSCSSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred -C----CCCCccHHHHHHHHHHhcccCCCCCcCHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 1 233579999999754321 123468999999999999999999999999999999999999999999999999
Q ss_pred hCCCCCcccCCCCCCcCccCC
Q 045796 358 VGLNNNVEESHLPKLKCLDAT 378 (378)
Q Consensus 358 ~~~~~~~~~~~l~~LpYL~av 378 (378)
++.+..++++++++||||+||
T Consensus 312 ~~~~~~~~~~~~~~lpyl~a~ 332 (476)
T 3e6i_A 312 IGPSRIPAIKDRQEMPYMDAV 332 (476)
T ss_dssp TTTTSCCCGGGGGGCHHHHHH
T ss_pred cCCCCCCChhhccCCchHHHH
Confidence 987778899999999999985
No 6
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A*
Probab=100.00 E-value=5.6e-47 Score=368.69 Aligned_cols=322 Identities=18% Similarity=0.262 Sum_probs=237.4
Q ss_pred CCCCCCCCCCCCcccccccCC-CCchHHHHHHHHHHhCCceEEecCCccEEEeCCHHHHHHHHHhCCCccCCCCCccccc
Q 045796 46 TAPPLPPGPRGLPLVGYLPFL-GTDLYKSLTKLADAYGPIYKFWLANKLFVVVSSSSIAKEMVRDKDTIFSNRQTTVATL 124 (378)
Q Consensus 46 ~~~~~~PgP~~~p~lG~~~~l-~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~v~dpe~i~~vl~~~~~~f~~r~~~~~~~ 124 (378)
+..++||||+++|++||++++ .+.++..+.+|+++|||||++++|+.++|+|+||+++++||.+++..|++|+......
T Consensus 7 s~~kLPPGP~~lP~iGn~~~~~~~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~i~~vl~~~~~~f~~r~~~~~~~ 86 (479)
T 3tbg_A 7 SKGKLPPGPLPLPGLGNLLHVDFQNTPYCFDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQ 86 (479)
T ss_dssp --CCCCCCSCCBTTTBTGGGCCTTSHHHHHHHHHHHHCSEEEEEETTEEEEEEEHHHHHHHHHTTTGGGSCBCCCCGGGG
T ss_pred CCCCCCCCCCCcCcccchHhhcCCCHHHHHHHHHHHhCCEEEEEECCeeEEEECCHHHHHHHHHhCChhhcCCCchHHHH
Confidence 344789999999999999988 4678899999999999999999999999999999999999999888899888765544
Q ss_pred cccc--CCCceeeCCCCchHHHHHHHHHHhhcCcchhhh--hHHHHHHHHHHHHHHHHhccCCCCcchHHhHHHHHHHHH
Q 045796 125 TPTL--GGNDIVFSPYGAQWRRLRKAMVGEMMTNSSLDS--CSALRKQVLKNTIRDLYNNKIGKPVDIGELSVSTSVNAL 200 (378)
Q Consensus 125 ~~~~--~~~~~~~~~~g~~w~~~Rk~l~~~~fs~~~l~~--~~~~~~~~~~~l~~~l~~~~~~~~~d~~~~~~~~t~dii 200 (378)
.... .+.+++++.+|+.|+++|+++. +.|+...+.. +.+.+......+.+.+... .++++|+.+++..+++|++
T Consensus 87 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~ 164 (479)
T 3tbg_A 87 ILGFGPRSQGVFLARYGPAWREQRRFSV-STLRNLGLGKKSLEQWVTEEAACLCAAFANH-SGRPFRPNGLLDKAVSNVI 164 (479)
T ss_dssp GGTCBTTBCCSTTCCSSHHHHHHHHHHH-HHHHHTTSTTCHHHHHHHHHHHHHHHHHHTT-TTCCBCTHHHHHHHHHHHH
T ss_pred HhccCCCCCceeeCCCCHHHHHHHHHHH-HHhcchhhhHHHHHHHHHHHHHHHHHHHHhc-cCCcccHHHHHHHHHHHHH
Confidence 3322 2345677778999999999986 7787666543 4566666666666666543 4578999999999999999
Q ss_pred HHHHhcCCCCCCCCcchhHHHHHHHHHHHHHhCCCCc--ccccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 045796 201 ENMLWGGGTGSGAHKDHTLEMKQLLDDIMELQGVPNI--SDIFPVLSRFDLQGVERKCKEIALWVEKIFNSAIEKRKNLI 278 (378)
Q Consensus 201 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~ 278 (378)
+.++||.+++ ..+. ......+.............. ...+|+..++ ....++.....+.....+.+.++++.+..
T Consensus 165 ~~~~fg~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (479)
T 3tbg_A 165 ASLTCGRRFE-YDDP-RFLRLLDLAQEGLKEESGFLREVLNAVPVLLHI--PALAGKVLRFQKAFLTQLDELLTEHRMTW 240 (479)
T ss_dssp HHHHHSCCCC-TTCH-HHHHHHHHHHHHHHTTSSHHHHHHHHSGGGGGS--HHHHHHHTHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHhhcCCccc-ccch-hhhhhhhhhhhhhhhhhhhhhhhhcccchhccc--hhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999983 3321 223333333333322211000 1112222222 12223444445566666777776665543
Q ss_pred hhCCCCCCCCCCcHHHHHHhccc--cCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcCchHHHHHHHHHHH
Q 045796 279 AKGTLKFDGRNKDFLQTFIEMLD--SEDSSISLNRTELIALLLDIILGGTDTTTTIMEWTLTKLLQFPVEMKKVQAELAE 356 (378)
Q Consensus 279 ~~~~~~~~~~~~dll~~ll~~~~--~~~~~~~l~~~ei~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~iq~kl~~Ei~~ 356 (378)
+ . ....+|+++.++.... ..+.+..++++++++++.++++||+||||++|+|++|+|++|||+|+|||+||++
T Consensus 241 --~--~-~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~ 315 (479)
T 3tbg_A 241 --D--P-AQPPRDLTEAFLAEMEKAKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDD 315 (479)
T ss_dssp --C--T-TSCCCSHHHHHHHHHHHTTTCTTCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred --h--c-ccccchhhhhhhhhhhhcccCCccchhhHHHHHHHHHHHHhhhhhhHHHHHHHHHHhccCHHHHHHHHHHHHH
Confidence 1 1 3346777777665421 1123457999999999999999999999999999999999999999999999999
Q ss_pred hhCCCCCcccCCCCCCcCccCC
Q 045796 357 VVGLNNNVEESHLPKLKCLDAT 378 (378)
Q Consensus 357 ~~~~~~~~~~~~l~~LpYL~av 378 (378)
+++.++.++++++++||||+||
T Consensus 316 ~~~~~~~~~~~~l~~lpyl~av 337 (479)
T 3tbg_A 316 VIGQVRRPEMGDQAHMPYTTAV 337 (479)
T ss_dssp HTCSSSCCCHHHHTTCHHHHHH
T ss_pred HHhhccccchhhhccccccccc
Confidence 9988888999999999999986
No 7
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A*
Probab=100.00 E-value=9.5e-47 Score=367.30 Aligned_cols=317 Identities=22% Similarity=0.369 Sum_probs=238.2
Q ss_pred CCCCCCCCCCcccccccCC-CCchHHHHHHHHHHhCCceEEecCCccEEEeCCHHHHHHHHHhCCCccCCCCCccccccc
Q 045796 48 PPLPPGPRGLPLVGYLPFL-GTDLYKSLTKLADAYGPIYKFWLANKLFVVVSSSSIAKEMVRDKDTIFSNRQTTVATLTP 126 (378)
Q Consensus 48 ~~~~PgP~~~p~lG~~~~l-~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~v~dpe~i~~vl~~~~~~f~~r~~~~~~~~~ 126 (378)
.+.||||+++|++||++++ .++++..+.+|+++||||+++++|+.+.|+|+||+++++||.++...|++++........
T Consensus 10 ~~~pPgP~~~p~iG~~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~~~~il~~~~~~f~~~~~~~~~~~~ 89 (477)
T 1r9o_A 10 GKLPPGPTPLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALIDLGEEFSGRGIFPLAERA 89 (477)
T ss_dssp CBCCCCSSSCC-----CCBCHHHHHHHHHHHHHHHCSEEEEESSSCEEEEECSHHHHHHHHTTTTTTTCEECCCSCCCTT
T ss_pred CCCCCCCCCCceeccHhhcCCCChHHHHHHHHHHhCCEEEEEECCCcEEEECCHHHHHHHHhcccHhhCCCCcchhhhhc
Confidence 3579999999999999988 456788999999999999999999989999999999999998777778776543222221
Q ss_pred ccCCCceeeCCCCchHHHHHHHHHHhhcCcc--hhhhhHHHHHHHHHHHHHHHHhccCCCCcchHHhHHHHHHHHHHHHH
Q 045796 127 TLGGNDIVFSPYGAQWRRLRKAMVGEMMTNS--SLDSCSALRKQVLKNTIRDLYNNKIGKPVDIGELSVSTSVNALENML 204 (378)
Q Consensus 127 ~~~~~~~~~~~~g~~w~~~Rk~l~~~~fs~~--~l~~~~~~~~~~~~~l~~~l~~~~~~~~~d~~~~~~~~t~dii~~~~ 204 (378)
. .+.++++ .+|+.|+++||++. +.|++. .++.+.+.++++++.+++.+.+. .++++|+.+++..+++|+|++++
T Consensus 90 ~-~~~~l~~-~~g~~w~~~Rr~~~-~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~-~~~~vd~~~~~~~~~~~vi~~~~ 165 (477)
T 1r9o_A 90 N-RGFGIVF-SNGKKWKEIRRFSL-MTLRNFGMGKRSIEDRVQEEARCLVEELRKT-KASPCDPTFILGCAPCNVICSII 165 (477)
T ss_dssp T-CTTSSTT-CCHHHHHHHHHHHH-HHHTTSSSCSSCHHHHHHHHHHHHHHHHHTT-TTSCBCTHHHHHHHHHHHHHHHH
T ss_pred c-CCCceEe-cCChHHHHHHHHHH-HHHHHhCCChHHHHHHHHHHHHHHHHHHHhc-CCCccChHHHHHHHHHHHHHHHH
Confidence 1 2345544 47999999999885 788877 55789999999999999999753 35689999999999999999999
Q ss_pred hcCCCCCCCCcchhHHHHHHHHHHHHHhCCC--Cccccccc-ccccCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhC
Q 045796 205 WGGGTGSGAHKDHTLEMKQLLDDIMELQGVP--NISDIFPV-LSRFDLQGVERKCKEIALWVEKIFNSAIEKRKNLIAKG 281 (378)
Q Consensus 205 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~P~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~ 281 (378)
||.+++ ..+ .....+.+.+...+...... .+...+|+ +++++ +..++..+..+.+.+++.++|+++++.. +
T Consensus 166 fG~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~lp--~~~~~~~~~~~~~~~~~~~~i~~r~~~~--~ 239 (477)
T 1r9o_A 166 FHKRFD-YKD-QQFLNLMEKLNENIKILSSPWIQICNNFSPIIDYFP--GTHNKLLKNVAFMKSYILEKVKEHQESM--D 239 (477)
T ss_dssp HSCCCC-TTC-HHHHHHHHHHHHHHHHHTCCBC-------CCCSCCT--TCHHHHHHHHHHHHHHHHHHHHHHHHTC--C
T ss_pred ccCcCC-CCC-HHHHHHHHHHHHHHHhhccchhHHHhhccHHHHhcc--hHHHHHHHHHHHHHHHHHHHHHHHHhcc--C
Confidence 999883 322 12344444444444332211 22335676 33343 2235556667778889999998887643 1
Q ss_pred CCCCCCCCCcHHHHHHhcccc--CCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcCchHHHHHHHHHHHhhC
Q 045796 282 TLKFDGRNKDFLQTFIEMLDS--EDSSISLNRTELIALLLDIILGGTDTTTTIMEWTLTKLLQFPVEMKKVQAELAEVVG 359 (378)
Q Consensus 282 ~~~~~~~~~dll~~ll~~~~~--~~~~~~l~~~ei~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~iq~kl~~Ei~~~~~ 359 (378)
+...+|+++.|++...+ .+++..+++++|++++.++++||+|||+++|+|++|+|++||++|+|||+||++++|
T Consensus 240 ----~~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~ 315 (477)
T 1r9o_A 240 ----MNNPQDFIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIG 315 (477)
T ss_dssp ----TTCCCSHHHHHHHHHHHHTTSCSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTC
T ss_pred ----CCCchHHHHHHHHHHHhhhccCCCCCCHHHHHHHHHHHhhcccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcC
Confidence 23357999999864321 112356999999999999999999999999999999999999999999999999998
Q ss_pred CCCCcccCCCCCCcCccCC
Q 045796 360 LNNNVEESHLPKLKCLDAT 378 (378)
Q Consensus 360 ~~~~~~~~~l~~LpYL~av 378 (378)
+++.++++++++||||+||
T Consensus 316 ~~~~~~~~~~~~lpyl~a~ 334 (477)
T 1r9o_A 316 RNRSPCMQDRSHMPYTDAV 334 (477)
T ss_dssp SSSCCCGGGGGGCHHHHHH
T ss_pred CCCCCChHhhccCcHHHHH
Confidence 7677899999999999985
No 8
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus}
Probab=100.00 E-value=5.2e-48 Score=377.79 Aligned_cols=312 Identities=20% Similarity=0.280 Sum_probs=241.5
Q ss_pred CCCCCCCCCCCCcccccccCC-CCchHHHHHHHHHHhCCceEEecCCccEEEeCCHHHHHHHHHhCCCccCCCCCccccc
Q 045796 46 TAPPLPPGPRGLPLVGYLPFL-GTDLYKSLTKLADAYGPIYKFWLANKLFVVVSSSSIAKEMVRDKDTIFSNRQTTVATL 124 (378)
Q Consensus 46 ~~~~~~PgP~~~p~lG~~~~l-~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~v~dpe~i~~vl~~~~~~f~~r~~~~~~~ 124 (378)
++.++||||++ ++++ .++++..+.+|+++||||+++++|+.+.|+|+||+++++||.+++..|++|+......
T Consensus 26 ~~~~lPPGP~~------l~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~~~~il~~~~~~f~~r~~~~~~~ 99 (496)
T 3qz1_A 26 RNLHLPPLVPG------FLHLLQPNLPIHLLSLTQKLGPVYRLRLGLQEVVVLNSKRTIEEAMIRKWVDFAGRPQIPSYK 99 (496)
T ss_dssp ---CCCCBCSC------SCTTSSSCHHHHHHHGGGTSCSEEEECSSSSCEEEECSTTHHHHTTTTSCSTTCBCCCCTTTT
T ss_pred cCCCCCcCCcc------ccccCCCcchHHHHHHHHHhCCEEEEEeCCcCEEEECCHHHHHHHHHhCcHhhCCCCCcchHH
Confidence 44578999987 4444 5678999999999999999999999999999999999999999888898887654433
Q ss_pred ccccCCCceeeCCCCchHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHhccCCCCcchHHhHHHHHHHHHHHHH
Q 045796 125 TPTLGGNDIVFSPYGAQWRRLRKAMVGEMMTNSSLDSCSALRKQVLKNTIRDLYNNKIGKPVDIGELSVSTSVNALENML 204 (378)
Q Consensus 125 ~~~~~~~~~~~~~~g~~w~~~Rk~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~d~~~~~~~~t~dii~~~~ 204 (378)
....+..+++++++|+.|+++||++. +.|+++.++.+.+.++++++++++.+.+. .|+++|+.+++.++++|+|++++
T Consensus 100 ~~~~~~~~l~~~~~g~~w~~~Rr~~~-~~f~~~~~~~~~~~i~~~~~~l~~~l~~~-~~~~vd~~~~~~~~~~dvi~~~~ 177 (496)
T 3qz1_A 100 LVSQRCQDISLGDYSLLWKAHKKLTR-SALLLGTRSSMEPWVDQLTQEFCERMRVQ-AGAPVTIQKEFSLLTCSIICYLT 177 (496)
T ss_dssp TSCTTCCCSSSSCCSHHHHHHHHHHH-HHHHC--CCCHHHHHHHHHHHHHHHHHTT-CSCCCHHHHHHTHHHHHHTTTTS
T ss_pred HhcCCCCceEECCCCHHHHHHHHHHH-HHHhhccHhhHHHHHHHHHHHHHHHHHhc-CCCccCHHHHHHHHHHHHHHHHh
Confidence 33223336666655999999999986 78988888899999999999999999753 46789999999999999999999
Q ss_pred hcCCCCCCCCcchhHHHHHHHHHHHHHhCC--CCcccccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhCC
Q 045796 205 WGGGTGSGAHKDHTLEMKQLLDDIMELQGV--PNISDIFPVLSRFDLQGVERKCKEIALWVEKIFNSAIEKRKNLIAKGT 282 (378)
Q Consensus 205 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~ 282 (378)
||. . . +.....+.+.+...+..... ..+.+++|++++++. +..++..+..+.+.+++.+.++++++.. +
T Consensus 178 fG~-~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~lp~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~- 248 (496)
T 3qz1_A 178 FGN-K-E---DTLVHAFHDCVQDLMKTWDHWSIQILDMVPFLRFFPN-PGLWRLKQAIENRDHMVEKQLRRHKESM--V- 248 (496)
T ss_dssp TTC-C-C---HHHHHHHHHHHHTTTTTTSSHHHHHHHHCGGGCCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHSC--C-
T ss_pred cCC-C-C---ChHHHHHHHHHHHHHHHhccchhHHHHhHHHHHhCCh-HHHHHHHHHHHHHHHHHHHHHHHHHhhc--c-
Confidence 997 2 1 11233444444433322221 122345787777653 2345667777888899999998887653 1
Q ss_pred CCCCCCCCcHHHHHHhccccC--CCC-CCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcCchHHHHHHHHHHHhhC
Q 045796 283 LKFDGRNKDFLQTFIEMLDSE--DSS-ISLNRTELIALLLDIILGGTDTTTTIMEWTLTKLLQFPVEMKKVQAELAEVVG 359 (378)
Q Consensus 283 ~~~~~~~~dll~~ll~~~~~~--~~~-~~l~~~ei~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~iq~kl~~Ei~~~~~ 359 (378)
+...+|+++.|++...+. +++ ..+++++|++++.++++||+|||+++|+|++|+|++||++|+|+|+||+++++
T Consensus 249 ---~~~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~ 325 (496)
T 3qz1_A 249 ---AGQWRDMTDYMLQGVGRQRVEEGPGQLLEGHVHMSVVDLFIGGTETTASTLSWAVAFLLHHPEIQRRLQEELDRELG 325 (496)
T ss_dssp ---SSCCSSSHHHHTTSSTTCCC-----CCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred ---CCCccchHHHHHHHHHhccccCCcccccHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhC
Confidence 234679999999875431 111 27999999999999999999999999999999999999999999999999998
Q ss_pred C----CCCcccCCCCCCcCccCC
Q 045796 360 L----NNNVEESHLPKLKCLDAT 378 (378)
Q Consensus 360 ~----~~~~~~~~l~~LpYL~av 378 (378)
+ ++.+ ++++++||||+||
T Consensus 326 ~~~~~~~~~-~~~~~~lpyl~a~ 347 (496)
T 3qz1_A 326 PGASCSRVT-YKDRARLPLLNAT 347 (496)
T ss_dssp SSSSSSCCS-TTGGGSCHHHHHH
T ss_pred CCcccCCCC-hhhhhcCcHHHHH
Confidence 6 4556 9999999999986
No 9
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A*
Probab=100.00 E-value=5.8e-47 Score=368.86 Aligned_cols=313 Identities=19% Similarity=0.237 Sum_probs=243.4
Q ss_pred CCCCCCCCCCCcccccccCC-----CCchHHHHHHHHHHhCCceEEecCCccEEEeCCHHHHHHHHHhCCCccCCCCCcc
Q 045796 47 APPLPPGPRGLPLVGYLPFL-----GTDLYKSLTKLADAYGPIYKFWLANKLFVVVSSSSIAKEMVRDKDTIFSNRQTTV 121 (378)
Q Consensus 47 ~~~~~PgP~~~p~lG~~~~l-----~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~v~dpe~i~~vl~~~~~~f~~r~~~~ 121 (378)
+.+.+|||+++|++||++.+ .+.++..+.+|+++||||+++++|+.+.|+++||+++++|+.++ ..|.+++...
T Consensus 22 pl~~~PGP~~~p~iG~~~~~~~~~~~~~~~~~~~~l~~~YG~i~~~~~g~~~~vvv~dp~~~~~il~~~-~~~~~r~~~~ 100 (482)
T 3k9v_A 22 NVTDLPGPTNWPLLGSLLEIFWKGGLKKQHDTLAEYHKKYGQIFRMKLGSFDSVHLGSPSLLEALYRTE-SAHPQRLEIK 100 (482)
T ss_dssp EGGGCCCSCCCTTTBTHHHHHHTTCGGGHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHTC-CSSCCCCCCH
T ss_pred CCCCCCCCCCCCccccHHHHhccCCcccHHHHHHHHHHHcCCEEEEccCCCCEEEEcCHHHHHHHHHhc-CCCCCCCCch
Confidence 45679999999999999876 13678999999999999999999999999999999999999874 4677776432
Q ss_pred c---ccccccCCCceeeCCCCchHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHhcc--CCCCcchHHhHHHHH
Q 045796 122 A---TLTPTLGGNDIVFSPYGAQWRRLRKAMVGEMMTNSSLDSCSALRKQVLKNTIRDLYNNK--IGKPVDIGELSVSTS 196 (378)
Q Consensus 122 ~---~~~~~~~~~~~~~~~~g~~w~~~Rk~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~--~~~~~d~~~~~~~~t 196 (378)
. .......+.|+ +..+|+.|+++||++.+.+++++.++.+.+.++++++.+++.+.+.+ +|+++|+.+++.+++
T Consensus 101 ~~~~~~~~~~~~~~l-~~~~g~~w~~~Rr~~~~~f~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~g~~vd~~~~~~~~t 179 (482)
T 3k9v_A 101 PWKAYRDHRNEAYGL-MILEGQEWQRVRSAFQKKLMKPVEIMKLDKKINEVLADFLERMDELCDERGRIPDLYSELNKWS 179 (482)
T ss_dssp HHHHHHHHHTCCCCT-TTCCHHHHHHHHHHHHHHHTCHHHHGGGHHHHHHHHHHHHHHHHHHCCTTSCCTTHHHHHHHHH
T ss_pred HHHHHHHhcCCCCCc-eeCCCchHHHHHHHhhHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHH
Confidence 1 11111123444 45579999999999963335888999999999999999999998653 356899999999999
Q ss_pred HHHHHHHHhcCCCCCCCC--cchhHHHHHHHHHHHHHhCCCCcccccc--cccccCccchHHHHHHHHHHHHHHHHHHHH
Q 045796 197 VNALENMLWGGGTGSGAH--KDHTLEMKQLLDDIMELQGVPNISDIFP--VLSRFDLQGVERKCKEIALWVEKIFNSAIE 272 (378)
Q Consensus 197 ~dii~~~~fG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~P--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 272 (378)
+|+|++++||.++|...+ .....++.+.+..++..... ...+| ++++++. ..+++.....+.+.+++.++|+
T Consensus 180 ~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~p~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~i~ 255 (482)
T 3k9v_A 180 FESICLVLYEKRFGLLQKETEEEALTFITAIKTMMSTFGK---MMVTPVELHKRLNT-KVWQAHTLAWDTIFKSVKPCID 255 (482)
T ss_dssp HHHHHHHHHSCCCCSSSTTSTTSSHHHHHHHHHHHTTGGG---GSSSCHHHHHHHTC-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcccccCCCCCCcchHHHHHHHHHHHHHHHHHH---HHhhhHHHHHhcCC-HHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999852221 12345677766666543221 12233 2223321 2234455556677788888888
Q ss_pred HHHHhhhhCCCCCCCCCCcHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcCchHHHHHHH
Q 045796 273 KRKNLIAKGTLKFDGRNKDFLQTFIEMLDSEDSSISLNRTELIALLLDIILGGTDTTTTIMEWTLTKLLQFPVEMKKVQA 352 (378)
Q Consensus 273 ~r~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~ei~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~iq~kl~~ 352 (378)
++++.. . .....|+++.+++. ..++++||.+++.++++||+|||+++|+|++|+|++||++|+|+|+
T Consensus 256 ~r~~~~--~----~~~~~d~l~~ll~~-------~~l~~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~kl~~ 322 (482)
T 3k9v_A 256 NRLQRY--S----QQPGADFLCDIYQQ-------DHLSKKELYAAVTELQLAAVETTANSLMWILYNLSRNPQAQRRLLQ 322 (482)
T ss_dssp HHHHHT--T----TCTTSCHHHHHHHH-------TCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHh--c----cCCchHHHHHHHhc-------cCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 887653 1 22357888888863 2589999999999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCCcccCCCCCCcCccCC
Q 045796 353 ELAEVVGLNNNVEESHLPKLKCLDAT 378 (378)
Q Consensus 353 Ei~~~~~~~~~~~~~~l~~LpYL~av 378 (378)
||++++|+++.++++|+++||||+||
T Consensus 323 Ei~~v~~~~~~~~~~~l~~lpyl~av 348 (482)
T 3k9v_A 323 EVQSVLPDNQTPRAEDLRNMPYLKAC 348 (482)
T ss_dssp HHHHHSCTTCCCCGGGGGGCHHHHHH
T ss_pred HHHHHhCCCCCCCHHHHhhCHHHHHH
Confidence 99999998778999999999999986
No 10
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A*
Probab=100.00 E-value=7.3e-47 Score=368.05 Aligned_cols=314 Identities=22% Similarity=0.407 Sum_probs=243.1
Q ss_pred CCCCCCCCCCcccccccCC-CCchHHHHHHHHHHhCCceEEecCCccEEEeCCHHHHHHHHHhCCCccCCCCCccccccc
Q 045796 48 PPLPPGPRGLPLVGYLPFL-GTDLYKSLTKLADAYGPIYKFWLANKLFVVVSSSSIAKEMVRDKDTIFSNRQTTVATLTP 126 (378)
Q Consensus 48 ~~~~PgP~~~p~lG~~~~l-~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~v~dpe~i~~vl~~~~~~f~~r~~~~~~~~~ 126 (378)
.+.||||+++|++||++.+ .++++..+.+|+++||||+++++|+.+.|+|+||+++++||.+++..|.+++........
T Consensus 9 ~~~pPgP~~~p~iG~~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~~~~~~ 88 (476)
T 1po5_A 9 GKLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAVVDPI 88 (476)
T ss_dssp CCCCCCSCCBTTTBTGGGCCTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCGGGGCSC
T ss_pred CCCCcCCCCCCccccHHhccCCcHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCCcHHHHhh
Confidence 3579999999999999988 567899999999999999999999989999999999999998777778776543222222
Q ss_pred ccCCCceeeCCCCchHHHHHHHHHHhhcCcc--hhhhhHHHHHHHHHHHHHHHHhccCCCCcchHHhHHHHHHHHHHHHH
Q 045796 127 TLGGNDIVFSPYGAQWRRLRKAMVGEMMTNS--SLDSCSALRKQVLKNTIRDLYNNKIGKPVDIGELSVSTSVNALENML 204 (378)
Q Consensus 127 ~~~~~~~~~~~~g~~w~~~Rk~l~~~~fs~~--~l~~~~~~~~~~~~~l~~~l~~~~~~~~~d~~~~~~~~t~dii~~~~ 204 (378)
. .+.+++++ +|+.|+++||++. +.|++. .++.+.+.++++++++++.+.+. .++++|+.+++..+++|+|++++
T Consensus 89 ~-~~~~l~~~-~g~~w~~~Rr~~~-~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~-~~~~~d~~~~~~~~~~~vi~~~~ 164 (476)
T 1po5_A 89 F-QGYGVIFA-NGERWRALRRFSL-ATMRDFGMGKRSVEERIQEEARCLVEELRKS-KGALLDNTLLFHSITSNIICSIV 164 (476)
T ss_dssp C-SSCCCCCS-SHHHHHHHHHHHH-HHHHHSCCCHHHHHHHHHHHHHHHHHHHHHT-TTCCBCCHHHHHHHHHHHHHHHH
T ss_pred c-CCCceEec-CCcHHHHHHHHHH-HHHHHhCCChhHHHHHHHHHHHHHHHHHHhc-CCCccCHHHHHHHHHHHHHHHHH
Confidence 1 23455444 7999999999885 788877 45788999999999999999764 35689999999999999999999
Q ss_pred hcCCCCCCCCcchhHHHHHHHHHHHHHhCC-C----Cccccccc-ccccCccchHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 045796 205 WGGGTGSGAHKDHTLEMKQLLDDIMELQGV-P----NISDIFPV-LSRFDLQGVERKCKEIALWVEKIFNSAIEKRKNLI 278 (378)
Q Consensus 205 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~P~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~ 278 (378)
||.+++ ..+ .++.+..+.+...... . .+...+|+ +++++ +..++..+..+.+.+++.++|+++++..
T Consensus 165 fG~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~lp--~~~~~~~~~~~~~~~~~~~~i~~r~~~~ 237 (476)
T 1po5_A 165 FGKRFD-YKD----PVFLRLLDLFFQSFSLISSFSSQVFELFSGFLKHFP--GTHRQIYRNLQEINTFIGQSVEKHRATL 237 (476)
T ss_dssp HSSCCC-TTC----HHHHHHHHHHHHHTTTCCTTHHHHHHHTHHHHHTSS--CSHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred cCCCCC-CCC----HHHHHHHHHHHHHHhhhcchhhHHHHhhhHHHHhcC--cHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999883 322 1233333333322211 1 11224565 33443 2235556667788889999998887542
Q ss_pred hhCCCCCCCCCCcHHHHHHhcccc--CCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcCchHHHHHHHHHHH
Q 045796 279 AKGTLKFDGRNKDFLQTFIEMLDS--EDSSISLNRTELIALLLDIILGGTDTTTTIMEWTLTKLLQFPVEMKKVQAELAE 356 (378)
Q Consensus 279 ~~~~~~~~~~~~dll~~ll~~~~~--~~~~~~l~~~ei~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~iq~kl~~Ei~~ 356 (378)
+ +...+|+++.|++...+ .+++..+++++|++++.++++||+|||+++|+|++|+|++||++|+|||+||++
T Consensus 238 --~----~~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~Ei~~ 311 (476)
T 1po5_A 238 --D----PSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQ 311 (476)
T ss_dssp --C----TTSCCSHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred --C----CCCcccHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 1 22357999999864321 112345899999999999999999999999999999999999999999999999
Q ss_pred hhCCCCCcccCCCCCCcCccCC
Q 045796 357 VVGLNNNVEESHLPKLKCLDAT 378 (378)
Q Consensus 357 ~~~~~~~~~~~~l~~LpYL~av 378 (378)
++|+++.++++++++||||+||
T Consensus 312 ~~~~~~~~~~~~l~~lpyl~a~ 333 (476)
T 1po5_A 312 VIGSHRPPALDDRAKMPYTDAV 333 (476)
T ss_dssp HTCSSSCCCGGGGGGCHHHHHH
T ss_pred HhCCCCCCChHHHhcCcHHHHH
Confidence 9987677899999999999985
No 11
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A*
Probab=100.00 E-value=1.2e-46 Score=366.51 Aligned_cols=316 Identities=20% Similarity=0.385 Sum_probs=248.4
Q ss_pred CCCCCCCCCcccccccCC-CCchHHHHHHHHHHhCCceEEecCCccEEEeCCHHHHHHHHHhCCCccCCCCCcccccccc
Q 045796 49 PLPPGPRGLPLVGYLPFL-GTDLYKSLTKLADAYGPIYKFWLANKLFVVVSSSSIAKEMVRDKDTIFSNRQTTVATLTPT 127 (378)
Q Consensus 49 ~~~PgP~~~p~lG~~~~l-~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~v~dpe~i~~vl~~~~~~f~~r~~~~~~~~~~ 127 (378)
+.||||+++|++||++.+ .++++..+.+|+++||||+++++|+.+.|+|+||+++++||.++...|++++.........
T Consensus 10 ~~pPgP~~~p~iG~~~~~~~~~~~~~~~~l~~~yG~v~~~~~~~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~~~~~~~ 89 (476)
T 2fdv_A 10 KLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFDWVF 89 (476)
T ss_dssp BCCCCCCCBTTTBTGGGCCTTBHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCCHHHHHHH
T ss_pred CCCCCCCCCcccccHhhcCCcchHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhcChHhhCCCCCcHHHhhhc
Confidence 579999999999999988 5678999999999999999999999999999999999999987766787765432222111
Q ss_pred cCCCceeeCCCCchHHHHHHHHHHhhcCcchh--hhhHHHHHHHHHHHHHHHHhccCCCCcchHHhHHHHHHHHHHHHHh
Q 045796 128 LGGNDIVFSPYGAQWRRLRKAMVGEMMTNSSL--DSCSALRKQVLKNTIRDLYNNKIGKPVDIGELSVSTSVNALENMLW 205 (378)
Q Consensus 128 ~~~~~~~~~~~g~~w~~~Rk~l~~~~fs~~~l--~~~~~~~~~~~~~l~~~l~~~~~~~~~d~~~~~~~~t~dii~~~~f 205 (378)
.+.+++++ +|+.|+++||++. +.|++..+ +.+.+.++++++++++.+.+. .++++|+.+++..+++|++++++|
T Consensus 90 -~~~~l~~~-~g~~~~~~Rr~~~-~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~-~~~~vd~~~~~~~~~~~vi~~~~f 165 (476)
T 2fdv_A 90 -KGYGVVFS-NGERAKQLRRFSI-ATLRDFGVGKRGIEERIQEEAGFLIDALRGT-GGANIDPTFFLSRTVSNVISSIVF 165 (476)
T ss_dssp -TTCSSSSC-CHHHHHHHHHHHH-HHHHHTTTTSHHHHHHHHHHHHHHHHHHHHT-TTCCBCCHHHHHHHHHHHHHHHHH
T ss_pred -CCCCeEec-CchHHHHHHHHHH-HHHHHhCCChhhHHHHHHHHHHHHHHHHHhc-CCCccChHHHHHHHHHHHHHHHHc
Confidence 24455544 6999999999985 78988766 789999999999999999763 356899999999999999999999
Q ss_pred cCCCCCCCCcchhHHHHHHHHHHHHHhCCC--Cccccccc-ccccCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhCC
Q 045796 206 GGGTGSGAHKDHTLEMKQLLDDIMELQGVP--NISDIFPV-LSRFDLQGVERKCKEIALWVEKIFNSAIEKRKNLIAKGT 282 (378)
Q Consensus 206 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~P~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~ 282 (378)
|.+++ ..+ ++..++.+.+...+...+.. .+...+|+ +++++ +..++..+..+.+.+++.++|+++++.. +
T Consensus 166 G~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~--~~~~~~~~~~~~~~~~~~~~i~~r~~~~--~- 238 (476)
T 2fdv_A 166 GDRFD-YKD-KEFLSLLRMMLGIFQFTSTSTGQLYEMFSSVMKHLP--GPQQQAFQLLQGLEDFIAKKVEHNQRTL--D- 238 (476)
T ss_dssp SSCCC-TTC-HHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHTTSC--SHHHHHHHHHHHHHHHHHHHHHHHHTTC--C-
T ss_pred CCcCC-CCC-HHHHHHHHHHHHHHHhhcccccchhhhhhhHHHhcC--cHHHHHHHHHHHHHHHHHHHHHHHHHhc--C-
Confidence 99983 322 13344555555554432211 12235676 44443 3345566677788889999998887542 1
Q ss_pred CCCCCCCCcHHHHHHhcccc--CCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcCchHHHHHHHHHHHhhCC
Q 045796 283 LKFDGRNKDFLQTFIEMLDS--EDSSISLNRTELIALLLDIILGGTDTTTTIMEWTLTKLLQFPVEMKKVQAELAEVVGL 360 (378)
Q Consensus 283 ~~~~~~~~dll~~ll~~~~~--~~~~~~l~~~ei~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~iq~kl~~Ei~~~~~~ 360 (378)
....+|+++.|++...+ .+++..+++++|++++.++++||+|||+++|+|++|+|++||++|+|||+||++++++
T Consensus 239 ---~~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~ 315 (476)
T 2fdv_A 239 ---PNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGK 315 (476)
T ss_dssp ---TTSCCSHHHHHHHHHHHTTTCTTCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCS
T ss_pred ---CCCCccHHHHHHHHHHhcccCccccccHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhhcC
Confidence 23357999999976422 1123569999999999999999999999999999999999999999999999999987
Q ss_pred CCCcccCCCCCCcCccCC
Q 045796 361 NNNVEESHLPKLKCLDAT 378 (378)
Q Consensus 361 ~~~~~~~~l~~LpYL~av 378 (378)
++.++++++++||||+||
T Consensus 316 ~~~~~~~~~~~lpyl~a~ 333 (476)
T 2fdv_A 316 NRQPKFEDRAKMPYMEAV 333 (476)
T ss_dssp SSCCCGGGGGGCHHHHHH
T ss_pred CCCCChhhhhcChHHHHH
Confidence 677899999999999985
No 12
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* 4gl5_A* 4gl7_A*
Probab=100.00 E-value=7.1e-47 Score=370.41 Aligned_cols=310 Identities=16% Similarity=0.238 Sum_probs=239.1
Q ss_pred CCCCCCCCCCcccccccCCCC----chHHHHHHHHHHhCCceEEecCCccEEEeCCHHHHHHHHHhCCCccCCCCCcccc
Q 045796 48 PPLPPGPRGLPLVGYLPFLGT----DLYKSLTKLADAYGPIYKFWLANKLFVVVSSSSIAKEMVRDKDTIFSNRQTTVAT 123 (378)
Q Consensus 48 ~~~~PgP~~~p~lG~~~~l~~----~~~~~~~~~~~~yG~i~~~~~g~~~~v~v~dpe~i~~vl~~~~~~f~~r~~~~~~ 123 (378)
.+.||||+++|++||++.+.. .++..+.+|+++||||+++++|+.+.|+++||++++++|.++ .|++|+.....
T Consensus 44 ~~~pPGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~il~~~--~~~~r~~~~~~ 121 (503)
T 3s79_A 44 TSSIPGPGYCMGIGPLISHGRFLWMGIGSACNYYNRVYGEFMRVWISGEETLIISKSSSMFHIMKHN--HYSSRFGSKLG 121 (503)
T ss_dssp -CCCCSCCCCSSSHHHHHHHHHHHHCHHHHHHHHHHHSCSEEEEESSSSEEEEECCHHHHHHHHHSG--GGCCCCCCHHH
T ss_pred cCCCCCCCCCceeeehhccccccccchhHHHHHHHHHhCCeEEEEeCCccEEEECCHHHHHHHHhcC--CCCCcchhhhh
Confidence 368999999999999988742 345688899999999999999999999999999999999653 57766543221
Q ss_pred -cccccCCCceeeCCCCchHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHhcc-CCCCcchHHhHHHHHHHHHH
Q 045796 124 -LTPTLGGNDIVFSPYGAQWRRLRKAMVGEMMTNSSLDSCSALRKQVLKNTIRDLYNNK-IGKPVDIGELSVSTSVNALE 201 (378)
Q Consensus 124 -~~~~~~~~~~~~~~~g~~w~~~Rk~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~-~~~~~d~~~~~~~~t~dii~ 201 (378)
......+.|++++.+|+.|+++||++. ++|+...++.+.+.+.++++++++.+.+.. .++++|+.+++.++++|+++
T Consensus 122 ~~~~~~~~~~~~~~~~g~~w~~~Rr~~~-~~f~~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~vdl~~~~~~~~~~vi~ 200 (503)
T 3s79_A 122 LQCIGMHEKGIIFNNNPELWKTTRPFFM-KALSGPGLVRMVTVCAESLKTHLDRLEEVTNESGYVDVLTLLRRVMLDTSN 200 (503)
T ss_dssp HHHHTCTTSSSTTCCCHHHHHHHHHHHH-HHTSTHHHHHHHHHHHHHHHHHHTTGGGTBCTTSCBCHHHHHHHHHHHHHH
T ss_pred hhhhccCCCceeeCCCccHHHHHHHhhh-HhhChHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEcHHHHHHHHHHHHHH
Confidence 122223567777788999999999986 899999999999999999999999887643 45689999999999999999
Q ss_pred HHHhcCCCCCCCCcchhHHHHHHHHHHHHHhCCCCcccccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhC
Q 045796 202 NMLWGGGTGSGAHKDHTLEMKQLLDDIMELQGVPNISDIFPVLSRFDLQGVERKCKEIALWVEKIFNSAIEKRKNLIAKG 281 (378)
Q Consensus 202 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~ 281 (378)
+++||.+++ .. +....+.+.+.......... .+++.+.++ .++..+..+.+.+++.++|+++++....+
T Consensus 201 ~~~fG~~~~-~~--~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 269 (503)
T 3s79_A 201 TLFLRIPLD-ES--AIVVKIQGYFDAWQALLIKP---DIFFKISWL-----YKKYEKSVKDLKDAIEVLIAEKRRRISTE 269 (503)
T ss_dssp HHHTCCCCC-HH--HHHHHHHHHHHHHHHHTTCC---HHHHHSGGG-----THHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHcCcccC-ch--hHHHHHHHHHHHHHHHhcCc---HHHhhcchh-----HHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 999998872 11 11222333333322221111 111111111 24556667788889999998887765221
Q ss_pred CCCCCCCCCcHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcCchHHHHHHHHHHHhhCCC
Q 045796 282 TLKFDGRNKDFLQTFIEMLDSEDSSISLNRTELIALLLDIILGGTDTTTTIMEWTLTKLLQFPVEMKKVQAELAEVVGLN 361 (378)
Q Consensus 282 ~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~ei~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~iq~kl~~Ei~~~~~~~ 361 (378)
....+..|+++.|++..+ +..+++++|.+++.++++||+|||+++++|++++|++||++|+|+|+||++++| +
T Consensus 270 --~~~~~~~d~l~~ll~~~~----~~~l~~~~i~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~~~kl~~Ei~~v~~-~ 342 (503)
T 3s79_A 270 --EKLEECMDFATELILAEK----RGDLTRENVNQCILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIG-E 342 (503)
T ss_dssp --TTTTTTCCHHHHHHHHHH----TTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTT-T
T ss_pred --cccchHHHHHHHHHHhcc----cCCCCHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhC-C
Confidence 101234699999998754 246899999999999999999999999999999999999999999999999999 6
Q ss_pred CCcccCCCCCCcCccCC
Q 045796 362 NNVEESHLPKLKCLDAT 378 (378)
Q Consensus 362 ~~~~~~~l~~LpYL~av 378 (378)
+.++++|+++||||+||
T Consensus 343 ~~~~~~~~~~lpyl~av 359 (503)
T 3s79_A 343 RDIKIDDIQKLKVMENF 359 (503)
T ss_dssp SCCCHHHHTTCHHHHHH
T ss_pred CCCCHHHHhcCHHHHHH
Confidence 77899999999999985
No 13
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A*
Probab=100.00 E-value=1.4e-47 Score=373.67 Aligned_cols=313 Identities=19% Similarity=0.295 Sum_probs=231.3
Q ss_pred CCCCCCCCCcccccccCCCCchHHHHHHHHHHhCCceEEecCCccEEEeCCHHHHHHHHHhC-CCccCCCCCcccccccc
Q 045796 49 PLPPGPRGLPLVGYLPFLGTDLYKSLTKLADAYGPIYKFWLANKLFVVVSSSSIAKEMVRDK-DTIFSNRQTTVATLTPT 127 (378)
Q Consensus 49 ~~~PgP~~~p~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~v~dpe~i~~vl~~~-~~~f~~r~~~~~~~~~~ 127 (378)
+.||||+++|++||++.+.+.++..+.+|+++||||+++++|+.+.|+|+||+++++||.++ ...|.+++.......
T Consensus 14 ~~~PGP~~~PliGn~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~f~~r~~~~~~~~-- 91 (485)
T 3nxu_A 14 LGIPGPTPLPFLGNILSYHKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVKECYSVFTNRRPFGPVGF-- 91 (485)
T ss_dssp HTCCCCCCBTTTBTGGGGGGCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHTTTTTTTCCCCCCCSCCGG--
T ss_pred CCCCCCCCcCeecCcHHhhcChHHHHHHHHHHcCCeEEEEeCCCCEEEECCHHHHHHHHhccchhhccCCcccccccc--
Confidence 35999999999999999977788999999999999999999999999999999999999887 567777665432221
Q ss_pred cCCCceeeCCCCchHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHhcc-CCCCcchHHhHHHHHHHHHHHHHhc
Q 045796 128 LGGNDIVFSPYGAQWRRLRKAMVGEMMTNSSLDSCSALRKQVLKNTIRDLYNNK-IGKPVDIGELSVSTSVNALENMLWG 206 (378)
Q Consensus 128 ~~~~~~~~~~~g~~w~~~Rk~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~-~~~~~d~~~~~~~~t~dii~~~~fG 206 (378)
.+.+ ++..+|+.|+++||++. ++|++++++.+.+.++++++++++.+.+.+ +|+++|+.+++.++++|+|+.++||
T Consensus 92 -~~~~-l~~~~g~~w~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~g~~~d~~~~~~~~~~dvi~~~~fG 168 (485)
T 3nxu_A 92 -MKSA-ISIAEDEEWKRLRSLLS-PTFTSGKLKEMVPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTSFG 168 (485)
T ss_dssp -GGGS-TTTCCHHHHHHHHHHHG-GGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEHHHHHHHHHHHHHHHHHHS
T ss_pred -cccC-ccccCCcHHHHHHhhcC-hhcCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcCcHHHHHHHHHHHHHHHHHcC
Confidence 1233 45567999999999985 899999999999999999999999997543 4678999999999999999999999
Q ss_pred CCCCCCCCcchhHHHHHHHHHHHHHhCCC---Ccccccccccc----cCccchHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 045796 207 GGTGSGAHKDHTLEMKQLLDDIMELQGVP---NISDIFPVLSR----FDLQGVERKCKEIALWVEKIFNSAIEKRKNLIA 279 (378)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~P~~~~----~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~ 279 (378)
.+++ ..+. ...++.+.+...+...... .....+|++.+ ++..... ....+.+..++.++++++.+.
T Consensus 169 ~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~-- 241 (485)
T 3nxu_A 169 VNID-SLNN-PQDPFVENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVFP---REVTNFLRKSVKRMKESRLED-- 241 (485)
T ss_dssp CCCC-GGGC-TTCHHHHHHTTSCCCCTTSHHHHHHHHCTTHHHHHHHTTCCSSC---HHHHHHHHHHHHHHHHHHHHC--
T ss_pred Cccc-cccC-CCcHHHHHHHHHhchhhHHHHHHHHHHhhhhHHHHHHhhhhhch---HHHHHHHHHHHHHHHHHHHhc--
Confidence 9984 2211 1123333332221100000 00112333211 1111111 122233444555555444321
Q ss_pred hCCCCCCCCCCcHHHHHHhccccC--CCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcCchHHHHHHHHHHHh
Q 045796 280 KGTLKFDGRNKDFLQTFIEMLDSE--DSSISLNRTELIALLLDIILGGTDTTTTIMEWTLTKLLQFPVEMKKVQAELAEV 357 (378)
Q Consensus 280 ~~~~~~~~~~~dll~~ll~~~~~~--~~~~~l~~~ei~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~iq~kl~~Ei~~~ 357 (378)
. .....|+++.|++...+. +.+..++++||++++.++++||+|||+++|+|++++|++||++|+|||+||+++
T Consensus 242 -~----~~~~~d~l~~ll~~~~~~~~~~~~~l~~~ei~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~kl~~Ei~~~ 316 (485)
T 3nxu_A 242 -T----QKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAV 316 (485)
T ss_dssp -C-------CCCHHHHHHHHHC--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred -c----CCCcccHHHHHHHhhhccccccccCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 1 334679999999865321 123469999999999999999999999999999999999999999999999999
Q ss_pred hCCCCCcccCCCCCCcCccCC
Q 045796 358 VGLNNNVEESHLPKLKCLDAT 378 (378)
Q Consensus 358 ~~~~~~~~~~~l~~LpYL~av 378 (378)
+++++.++++++.+||||+||
T Consensus 317 ~~~~~~~~~~~~~~lpyl~a~ 337 (485)
T 3nxu_A 317 LPNKAPPTYDTVLQMEYLDMV 337 (485)
T ss_dssp STTTCCCCHHHHHHCHHHHHH
T ss_pred hccCCCCCHHHHhcChHHHHH
Confidence 998778999999999999986
No 14
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ...
Probab=100.00 E-value=4.2e-45 Score=355.14 Aligned_cols=312 Identities=15% Similarity=0.215 Sum_probs=236.5
Q ss_pred CCCCCCCCCcccccccCCC-CchHHHHHHHHHHhCCceEEecCCccEEEeCCHHHHHHHHHhCCCccCCCCCccccccc-
Q 045796 49 PLPPGPRGLPLVGYLPFLG-TDLYKSLTKLADAYGPIYKFWLANKLFVVVSSSSIAKEMVRDKDTIFSNRQTTVATLTP- 126 (378)
Q Consensus 49 ~~~PgP~~~p~lG~~~~l~-~~~~~~~~~~~~~yG~i~~~~~g~~~~v~v~dpe~i~~vl~~~~~~f~~r~~~~~~~~~- 126 (378)
+.+|||+++|++||++++. +.++..+.+|+++||||+++++|+.+.|+|+||+++++|+.+. .|. ++........
T Consensus 3 ~~~PGP~~~p~iG~l~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~~~~~~~il~~~--~f~-~~~~~~~~~~~ 79 (470)
T 2ij2_A 3 KEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES--RFD-KNLSQALKFVR 79 (470)
T ss_dssp CCCCCCCCCGGGTTGGGGCSSCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHTCTT--TEE-ECCCHHHHHHH
T ss_pred CCCCCCCCCCccccHHHHhcccchHHHHHHHHHhCCeEEEecCCccEEEECCHHHHHHHHhhc--CcC-cCchhHHHHHH
Confidence 4689999999999999884 5678889999999999999999999999999999999999643 353 2211111111
Q ss_pred ccCCCceeeC-CCCchHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHhccCCCCcchHHhHHHHHHHHHHHHHh
Q 045796 127 TLGGNDIVFS-PYGAQWRRLRKAMVGEMMTNSSLDSCSALRKQVLKNTIRDLYNNKIGKPVDIGELSVSTSVNALENMLW 205 (378)
Q Consensus 127 ~~~~~~~~~~-~~g~~w~~~Rk~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~d~~~~~~~~t~dii~~~~f 205 (378)
...+.+++++ .+|+.|+++||++. ++|+++.++.+.+.++++++++++.|....+++++|+.+++.++++|+|+.++|
T Consensus 80 ~~~~~~l~~~~~~g~~w~~~Rr~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~vd~~~~~~~~~~~vi~~~~f 158 (470)
T 2ij2_A 80 DFAGDGLFTSWTHEKNWKKAHNILL-PSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGF 158 (470)
T ss_dssp HHHTTSGGGSCTTSHHHHHHHHHHG-GGGSTTTHHHHHHHHHHHHHHHHHHHHTCCTTCCEEHHHHHHHHHHHHHHHHHH
T ss_pred HhcCCceEEcCCCchHHHHHHHHhc-cccCHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeEEHHHHHHHHHHHHHHHHHc
Confidence 1113455444 47999999999985 899999999999999999999999997532346899999999999999999999
Q ss_pred cCCCCCCCCcchhHHHHHHHHHHHHHhCCCCcccccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCCC
Q 045796 206 GGGTGSGAHKDHTLEMKQLLDDIMELQGVPNISDIFPVLSRFDLQGVERKCKEIALWVEKIFNSAIEKRKNLIAKGTLKF 285 (378)
Q Consensus 206 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~ 285 (378)
|.+++ ....+...++.+.+...+....... ...|++.+++ ....++..+..+.+.+++.++|++|++.
T Consensus 159 G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~r~~~-------- 226 (470)
T 2ij2_A 159 NYRFN-SFYRDQPHPFITSMVRALDEAMNKL--QRANPDDPAY-DENKRQFQEDIKVMNDLVDKIIADRKAS-------- 226 (470)
T ss_dssp SCCCC-GGGCSSCCHHHHHHHHHHHHHHHTC-----CTTSGGG-HHHHHHHHHHHHHHHHHHHHHHHHHHHH--------
T ss_pred CCccc-ccccCCCCHHHHHHHHHHHHHHHHH--hhhhhHhhcc-chHHHHHHHHHHHHHHHHHHHHHHHHhc--------
Confidence 99873 2111112345555544443221100 0113333332 1223455556677888888999887653
Q ss_pred CCCCCcHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcCchHHHHHHHHHHHhhCCCCCcc
Q 045796 286 DGRNKDFLQTFIEMLDSEDSSISLNRTELIALLLDIILGGTDTTTTIMEWTLTKLLQFPVEMKKVQAELAEVVGLNNNVE 365 (378)
Q Consensus 286 ~~~~~dll~~ll~~~~~~~~~~~l~~~ei~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~iq~kl~~Ei~~~~~~~~~~~ 365 (378)
+...+|+++.|++..+++ ++..+++++|++++.++++||+|||+++|+|++|+|++||++|+|||+||++++|+ ..++
T Consensus 227 ~~~~~dll~~ll~~~~~~-~~~~ls~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~-~~~~ 304 (470)
T 2ij2_A 227 GEQSDDLLTHMLNGKDPE-TGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVD-PVPS 304 (470)
T ss_dssp CCCCSSHHHHHHHCCCTT-TCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCS-SSCC
T ss_pred ccCchhHHHHHHhccCcc-cCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCC-CCCC
Confidence 223579999999865321 24569999999999999999999999999999999999999999999999999985 4589
Q ss_pred cCCCCCCcCccCC
Q 045796 366 ESHLPKLKCLDAT 378 (378)
Q Consensus 366 ~~~l~~LpYL~av 378 (378)
++++++||||+||
T Consensus 305 ~~~~~~lpyl~a~ 317 (470)
T 2ij2_A 305 YKQVKQLKYVGMV 317 (470)
T ss_dssp HHHHHTCHHHHHH
T ss_pred HHHHhCCHHHHHH
Confidence 9999999999985
No 15
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3tik_A* 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A*
Probab=100.00 E-value=1.6e-45 Score=355.56 Aligned_cols=311 Identities=14% Similarity=0.233 Sum_probs=249.4
Q ss_pred CCCCCCCCC-CcccccccCCCCchHHHHHHHHHHhC-CceEEecCCccEEEeCCHHHHHHHHHhCCCccCCCCCcccccc
Q 045796 48 PPLPPGPRG-LPLVGYLPFLGTDLYKSLTKLADAYG-PIYKFWLANKLFVVVSSSSIAKEMVRDKDTIFSNRQTTVATLT 125 (378)
Q Consensus 48 ~~~~PgP~~-~p~lG~~~~l~~~~~~~~~~~~~~yG-~i~~~~~g~~~~v~v~dpe~i~~vl~~~~~~f~~r~~~~~~~~ 125 (378)
.++||||++ +|++||++.+..+++..+.+|+++|| +||++++|+.+.|+|+||+++++++.+++..|++++.......
T Consensus 2 ~~~PPg~p~~~P~iG~~~~~~~~~~~~~~~~~~~yG~~i~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~~~ 81 (450)
T 3gw9_A 2 GKLPPVYPVTVPILGHIIQFGKSPLGFMQECKRQLKSGIFTINIVGKRVTIVGDPHEHSRFFLPRNEVLSPREVYSFMVP 81 (450)
T ss_dssp CSCCCBCCCCSTTTBTHHHHHHCHHHHHHHHHHHHTCSEEEEEETTEEEEEECCGGGTHHHHSSCTTTEESTGGGGGGHH
T ss_pred CCCCCCCCCCcchhccHHHHccCHHHHHHHHHHHhCCCeEEEEECCEeEEEEeCHHHHHHHHhCChhhccchhhHHHHHH
Confidence 367999765 99999999887678999999999999 9999999999999999999999999988777877764432222
Q ss_pred cccCCCceeeCCCCchHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHH-HHHhccCCCCcchHHhHHHHHHHHHHHHH
Q 045796 126 PTLGGNDIVFSPYGAQWRRLRKAMVGEMMTNSSLDSCSALRKQVLKNTIR-DLYNNKIGKPVDIGELSVSTSVNALENML 204 (378)
Q Consensus 126 ~~~~~~~~~~~~~g~~w~~~Rk~l~~~~fs~~~l~~~~~~~~~~~~~l~~-~l~~~~~~~~~d~~~~~~~~t~dii~~~~ 204 (378)
. .|.|++++.+|+.|+++||++. ++|+++.++.+.+.++++++++++ .+.+ .++++|+.+++.++++|++++++
T Consensus 82 ~--~g~~~~~~~~~~~~~~~R~~~~-~~f~~~~l~~~~~~i~~~~~~ll~~~~~~--~~~~vd~~~~~~~~~~~~i~~~~ 156 (450)
T 3gw9_A 82 V--FGEGVAYAAPYPRMREQLNFLA-EELTIAKFQNFVPAIQHEVRKFMAANWDK--DEGEINLLEDCSTMIINTACQCL 156 (450)
T ss_dssp H--HCTTSGGGSCHHHHHHHHHHHH-HTTSGGGCTTHHHHHHHHHHHHHHHHSCS--SEEEEEHHHHHHHHHHHHHHHHH
T ss_pred H--hcCCcccCCCcHHHHHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHHHHHhcc--CCCcccHHHHHHHHHHHHHHHHH
Confidence 2 1456666667999999999985 899999999999999999999998 6653 24579999999999999999999
Q ss_pred hcCCCCCCCCcchhHHHHHHHHHHHHHhCCCCcccccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCC
Q 045796 205 WGGGTGSGAHKDHTLEMKQLLDDIMELQGVPNISDIFPVLSRFDLQGVERKCKEIALWVEKIFNSAIEKRKNLIAKGTLK 284 (378)
Q Consensus 205 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~ 284 (378)
||.+++ ... ...++.+.+..+... ...+..++|++++++. ...++..+..+.+.+++.++++++++....+
T Consensus 157 fG~~~~-~~~--~~~~~~~~~~~~~~~--~~~~~~~~P~l~~lp~-~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~--- 227 (450)
T 3gw9_A 157 FGEDLR-KRL--DARRFAQLLAKMESS--LIPAAVFLPILLKLPL-PQSARCHEARTELQKILSEIIIARKEEEVNK--- 227 (450)
T ss_dssp SCHHHH-HHS--CHHHHHHHHHHHHHT--CCGGGGTCGGGGGSCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT---
T ss_pred cCcchh-hhh--hhHHHHHHHHHHHhc--cccchhcccchhccCC-chhHHHHHHHHHHHHHHHHHHHHHHHhhccc---
Confidence 998873 211 134555555554332 2233456788777653 2345556677788899999998887543112
Q ss_pred CCCCCCcHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHh--cCchHHHHHHHHHHHhhCCCC
Q 045796 285 FDGRNKDFLQTFIEMLDSEDSSISLNRTELIALLLDIILGGTDTTTTIMEWTLTKLL--QFPVEMKKVQAELAEVVGLNN 362 (378)
Q Consensus 285 ~~~~~~dll~~ll~~~~~~~~~~~l~~~ei~~~~~~~~~AG~dTTa~tl~~~l~~L~--~~P~iq~kl~~Ei~~~~~~~~ 362 (378)
+....|+++.|++...+ ++..+++++|.++++++++||+|||+++++|++++|+ +||++|+|+|+||+++ +.
T Consensus 228 -~~~~~d~l~~ll~~~~~--~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~~~p~~~~~l~~Ei~~~---~~ 301 (450)
T 3gw9_A 228 -DSSTSDLLSGLLSAVYR--DGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEF---PA 301 (450)
T ss_dssp -SCCCCSHHHHHHHCBCT--TSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSGGGHHHHHHHHHHHTTC---CS
T ss_pred -CCccchHHHHHHHhhcc--CCCCCCHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHcCCcchhHHHHHHHHHHhc---cC
Confidence 34568999999987543 2456999999999999999999999999999999999 9999999999999998 34
Q ss_pred CcccCCC-CCCcCccCC
Q 045796 363 NVEESHL-PKLKCLDAT 378 (378)
Q Consensus 363 ~~~~~~l-~~LpYL~av 378 (378)
.++++++ ++||||+||
T Consensus 302 ~~~~~~~~~~lpyl~a~ 318 (450)
T 3gw9_A 302 QLNYNNVMDEMPFAERC 318 (450)
T ss_dssp SCCHHHHHHHCHHHHHH
T ss_pred CCChHHHHHhcHHHHHH
Confidence 6789999 999999985
No 16
>3ld6_A Lanosterol 14-alpha demethylase; cytochrome P450, ketoconazole, S genomics, structural genomics consortium, SGC; HET: HEM KKK BCD; 2.80A {Homo sapiens} PDB: 3juv_A* 3jus_A*
Probab=100.00 E-value=1.9e-45 Score=356.72 Aligned_cols=307 Identities=19% Similarity=0.238 Sum_probs=240.1
Q ss_pred CCCCCCCCC-CcccccccCCCCchHHHHHHHHHHhCCceEEecCCccEEEeCCHHHHHHHHHhCCCccCCCCCccccccc
Q 045796 48 PPLPPGPRG-LPLVGYLPFLGTDLYKSLTKLADAYGPIYKFWLANKLFVVVSSSSIAKEMVRDKDTIFSNRQTTVATLTP 126 (378)
Q Consensus 48 ~~~~PgP~~-~p~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~v~dpe~i~~vl~~~~~~f~~r~~~~~~~~~ 126 (378)
.+.||||++ +|++||++.++++++.++.+|+++|||||++++|+.++|+|+||+++++++.+++..|+.++........
T Consensus 10 ~~~PP~~~~~lP~iG~~~~~~~~~~~~~~~~~~kYG~i~~~~~~~~~~vvv~~~~~i~~il~~~~~~~~~~~~~~~~~~~ 89 (461)
T 3ld6_A 10 VKSPPYIFSPIPFLGHAIAFGKSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYSRLTTP 89 (461)
T ss_dssp CCCCCBCCCSSTTTBTHHHHHHCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHHHHHHHHHH
T ss_pred CCCCCCCCCCcCeeeeHHHhhhCHHHHHHHHHHHhCCEEEEEECCccEEEEeCHHHHHHHHhCCccccCCCcchhhhhhc
Confidence 356888875 9999999998778899999999999999999999999999999999999999888777766543222111
Q ss_pred ccCCCceeeCCCCchHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHhccCCCCcchHHhHHHHHHHHHHHHHhc
Q 045796 127 TLGGNDIVFSPYGAQWRRLRKAMVGEMMTNSSLDSCSALRKQVLKNTIRDLYNNKIGKPVDIGELSVSTSVNALENMLWG 206 (378)
Q Consensus 127 ~~~~~~~~~~~~g~~w~~~Rk~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~d~~~~~~~~t~dii~~~~fG 206 (378)
. .|.+++++.+|+.|+++|+++. ++|+.+.++++.+.++++++++++.|.+ +..+|+.+.+..+++|+++.++||
T Consensus 90 ~-~g~~~~~~~~~~~~~~~R~~~~-~~f~~~~l~~~~~~i~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~i~~~~fG 164 (461)
T 3ld6_A 90 V-FGKGVAYDVPNPVFLEQKKMLK-SGLNIAHFKQHVSIIEKETKEYFESWGE---SGEKNVFEALSELIILTASHCLHG 164 (461)
T ss_dssp H-HCTTSGGGSCHHHHHHHHHHHH-HHSSHHHHHHHHHHHHHHHHHHGGGGCS---EEEEEHHHHHHHHHHHHHHHHHTC
T ss_pred c-CCCccccCCCcHHHHHHHHhcc-ccccHHHHhhhhHHHHHHHHHHHHHHhh---cCCccHHHHHHHHHHHHHHHHHcC
Confidence 1 2456777778999999999985 8999999999999999999999888764 456899999999999999999999
Q ss_pred CCCCCCCCcchhHHHHHHHHHHHHHhCCCCcccccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCCCC
Q 045796 207 GGTGSGAHKDHTLEMKQLLDDIMELQGVPNISDIFPVLSRFDLQGVERKCKEIALWVEKIFNSAIEKRKNLIAKGTLKFD 286 (378)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~ 286 (378)
.++ ..... ..+.+....+..... .....+|. +++.. ..++..+..+.+.+++.+.|++++.. .
T Consensus 165 ~~~-~~~~~---~~~~~~~~~~~~~~~--~~~~~~~~--~~~~~-~~~~~~~~~~~l~~~~~~~i~~r~~~--------~ 227 (461)
T 3ld6_A 165 KEI-RSQLN---EKVAQLYADLDGGFS--HAAWLLPG--WLPLP-SFRRRDRAHREIKDIFYKAIQKRRQS--------Q 227 (461)
T ss_dssp HHH-HHTCC---HHHHHHHHHHHTTSS--HHHHHSCT--TSCCH-HHHHHHHHHHHHHHHHHHHHHHHTTC--------C
T ss_pred cch-hhhhh---hhhhhhhhhhhhhhh--hHHHhhhh--hccCc-HHHHHHHHHHHHHHHHHHHHHHHHhc--------C
Confidence 887 33221 223333322221111 11112232 23222 23445566677888888888776542 3
Q ss_pred CCCCcHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcCchHHHHHHHHHHHhhCCC-CCcc
Q 045796 287 GRNKDFLQTFIEMLDSEDSSISLNRTELIALLLDIILGGTDTTTTIMEWTLTKLLQFPVEMKKVQAELAEVVGLN-NNVE 365 (378)
Q Consensus 287 ~~~~dll~~ll~~~~~~~~~~~l~~~ei~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~iq~kl~~Ei~~~~~~~-~~~~ 365 (378)
...+|+++.|+++..+ ++..++++||++++.++++||+|||+++|+|++++|++||++|+|||+||++++|+. ..++
T Consensus 228 ~~~~d~l~~ll~~~~~--~~~~ls~~ei~~~~~~~~~aG~dTt~~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~ 305 (461)
T 3ld6_A 228 EKIDDILQTLLDATYK--DGRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGENLPPLT 305 (461)
T ss_dssp CCCCSHHHHHHTCBCT--TSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCTTCCCCC
T ss_pred CCCcchhhhhHHhhhc--ccCCCCHHHHHHHHHhhhhcccccccccchhhhcccccChHHHHHHHHHHHHHhcccccchh
Confidence 4568999999987654 356799999999999999999999999999999999999999999999999999874 4568
Q ss_pred cCCCCCCcCccCC
Q 045796 366 ESHLPKLKCLDAT 378 (378)
Q Consensus 366 ~~~l~~LpYL~av 378 (378)
++++++||||+||
T Consensus 306 ~~~l~~lpyl~av 318 (461)
T 3ld6_A 306 YDQLKDLNLLDRC 318 (461)
T ss_dssp HHHHHTCHHHHHH
T ss_pred HHHHHHHhhhhhe
Confidence 8999999999986
No 17
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A*
Probab=100.00 E-value=1.8e-44 Score=352.01 Aligned_cols=319 Identities=14% Similarity=0.101 Sum_probs=237.0
Q ss_pred cCCCCCCCCCCCCcccccccCC-----CCchHHHHHHHHHHhCCceEEecCCccEEEeCCHHHHHHHHHhCCCccCCCCC
Q 045796 45 ATAPPLPPGPRGLPLVGYLPFL-----GTDLYKSLTKLADAYGPIYKFWLANKLFVVVSSSSIAKEMVRDKDTIFSNRQT 119 (378)
Q Consensus 45 ~~~~~~~PgP~~~p~lG~~~~l-----~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~v~dpe~i~~vl~~~~~~f~~r~~ 119 (378)
.++.+.+|||+++|+. |++.+ ...++..+.+|+++|||||++++|+.+.|+|+||+++++||.+++ .|++|+.
T Consensus 5 ~~pL~~~PGP~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~kYG~i~~~~~g~~~~vvv~dp~~~~~il~~~~-~f~~r~~ 82 (487)
T 3n9y_A 5 PRPFNEIPSPGDNGWL-NLYHFWRETGTHKVHLHHVQNFQKYGPIYREKLGNVESVYVIDPEDVALLFKSEG-PNPERFL 82 (487)
T ss_dssp CBCGGGSCCSCSCHHH-HHHHHHHHTCGGGHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHHTCC-SSCCCCC
T ss_pred CCCHhhCCCCCCCChh-hHHHHHhcCCCcchhHHHHHHHHHcCceeeccCCCCCEEEEcCHHHHHHHHHhCC-CCCCCCC
Confidence 3456679999998875 66554 136788999999999999999999999999999999999998764 6877764
Q ss_pred cccc---cccccCCCceeeCCCCchHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHhcc-----CCCCcchHHh
Q 045796 120 TVAT---LTPTLGGNDIVFSPYGAQWRRLRKAMVGEMMTNSSLDSCSALRKQVLKNTIRDLYNNK-----IGKPVDIGEL 191 (378)
Q Consensus 120 ~~~~---~~~~~~~~~~~~~~~g~~w~~~Rk~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~-----~~~~~d~~~~ 191 (378)
.... ......+.+ +++.+|+.|+++||++.+.+|+++.++.+.+.++++++++++.|.+.. ++.++|+.++
T Consensus 83 ~~~~~~~~~~~~~~~~-l~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~~vd~~~~ 161 (487)
T 3n9y_A 83 IPPWVAYHQYYQRPIG-VLLKKSAAWKKDRVALNQEVMAPEATKNFLPLLDAVSRDFVSVLHRRIKKAGSGNYSGDISDD 161 (487)
T ss_dssp CHHHHHHHHHTTCCCC-GGGCCHHHHHHHHHHHHHHHTSHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTSSSEEECCHHH
T ss_pred CcHHHHHHHHccccCC-CccCCcHHHHHHHHhcCcccCCchHHHHhhhHHHHHHHHHHHHHHHHhcccccCCCCccHHHH
Confidence 3211 111112334 456679999999999963369999999999999999999999987631 2347999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCc--chhHHHHHHHHHHHHHhCCCCccccccc--ccccCccchHHHHHHHHHHHHHHH
Q 045796 192 SVSTSVNALENMLWGGGTGSGAHK--DHTLEMKQLLDDIMELQGVPNISDIFPV--LSRFDLQGVERKCKEIALWVEKIF 267 (378)
Q Consensus 192 ~~~~t~dii~~~~fG~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~P~--~~~~~~~~~~~~~~~~~~~~~~~~ 267 (378)
+.++++|+|++++||.+++...+. .....+.+.+..++..... ...+|. +++++ ...+++.....+.+.+++
T Consensus 162 ~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~p~~l~~~~~-~~~~~~~~~~~~~~~~~~ 237 (487)
T 3n9y_A 162 LFRFAFESITNVIFGERQGMLEEVVNPEAQRFIDAIYQMFHTSVP---MLNLPPDLFRLFR-TKTWKDHVAAWDVIFSKA 237 (487)
T ss_dssp HHHHHHHHHHHHHHSSCCCTTSSSCCHHHHHHHHHHHHHHHHHGG---GTTSCHHHHHHHC-HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccccccCCCCChHHHHHHHHHHHHHHHHHH---HHhcCHHHHhhcc-cHHHHHHHHHHHHHHHHH
Confidence 999999999999999998422111 1234556666555544321 123343 22332 122233334444556666
Q ss_pred HHHHHHHHHhhhhCCCCCCCCCCcHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcCchHH
Q 045796 268 NSAIEKRKNLIAKGTLKFDGRNKDFLQTFIEMLDSEDSSISLNRTELIALLLDIILGGTDTTTTIMEWTLTKLLQFPVEM 347 (378)
Q Consensus 268 ~~~i~~r~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~ei~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~iq 347 (378)
.+.++++++...... ..+....|+++.|++. ..+++++|++++.++++||+|||+++|+|++|+|++||++|
T Consensus 238 ~~~i~~~~~~~~~~~-~~~~~~~d~l~~ll~~-------~~l~~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~ 309 (487)
T 3n9y_A 238 DIYTQNFYWELRQKG-SVHHDYRGILYRLLGD-------SKMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQ 309 (487)
T ss_dssp HHHHHHHHHHHHHHC-CCCSSCCCHHHHHHHS-------CSSCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHCHHHH
T ss_pred HHHHHHHHHHHHhcC-CcccchHHHHHHHHhc-------CCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhChHHH
Confidence 777766654432110 1123457999999973 25899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhCCCCCcccCCCCCCcCccCC
Q 045796 348 KKVQAELAEVVGLNNNVEESHLPKLKCLDAT 378 (378)
Q Consensus 348 ~kl~~Ei~~~~~~~~~~~~~~l~~LpYL~av 378 (378)
+|||+||++++++++.++++++++||||+||
T Consensus 310 ~kl~~Ei~~~~~~~~~~~~~~l~~lpyl~av 340 (487)
T 3n9y_A 310 DMLRAEVLAARHQAQGDMATMLQLVPLLKAS 340 (487)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHTTSCHHHHHH
T ss_pred HHHHHHHHHhhcccccchhhhhhhCHHHHHH
Confidence 9999999999987666779999999999986
No 18
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A*
Probab=100.00 E-value=1.7e-43 Score=342.41 Aligned_cols=305 Identities=17% Similarity=0.224 Sum_probs=220.8
Q ss_pred CCCCC-CCCCcccccccCCCCchHHHHHHHHHHhCCceEEecCCccEEEeCCHHHHHHHHHhCCCccCCCCCcccccccc
Q 045796 49 PLPPG-PRGLPLVGYLPFLGTDLYKSLTKLADAYGPIYKFWLANKLFVVVSSSSIAKEMVRDKDTIFSNRQTTVATLTPT 127 (378)
Q Consensus 49 ~~~Pg-P~~~p~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~v~dpe~i~~vl~~~~~~f~~r~~~~~~~~~~ 127 (378)
++||| |+++|++||++.+..+++..+.+|+++||||+++++|+.+.++|+||+++++|+.+++..|++++........
T Consensus 4 ~~PPg~p~~~P~iG~~~~~~~~~~~~~~~l~~~yG~v~~~~~~~~~~~vv~~~~~~~~il~~~~~~~~~~~~~~~~~~~- 82 (455)
T 2cib_A 4 VALPRVSGGHDEHGHLEEFRTDPIGLMQRVRDELGDVGTFQLAGKQVVLLSGSHANEFFFRAGDDDLDQAKAYPFMTPI- 82 (455)
T ss_dssp -CCCBCSCCCBTTBTHHHHTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEECTTSCGGGHHH-
T ss_pred CCCCCCCCCCCCccCHHHHhhChHHHHHHHHHHcCCEEEEEeCCceEEEECCHHHHHHHHhcCccccCcccchhHHHhh-
Confidence 57898 7889999999888777899999999999999999999989999999999999998876677766543221111
Q ss_pred cCCCceeeCCCCchHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHhccCCCCcchHHhHHHHHHHHHHHHHhcC
Q 045796 128 LGGNDIVFSPYGAQWRRLRKAMVGEMMTNSSLDSCSALRKQVLKNTIRDLYNNKIGKPVDIGELSVSTSVNALENMLWGG 207 (378)
Q Consensus 128 ~~~~~~~~~~~g~~w~~~Rk~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~d~~~~~~~~t~dii~~~~fG~ 207 (378)
. +.++ +. +|+.|+++|+++. ++|++++++.+.+.++++++++++.|.. ++++|+.+++.++++|++++++||.
T Consensus 83 ~-g~~~-~~-~~~~~~~~R~~~~-~~f~~~~l~~~~~~i~~~~~~l~~~~~~---~~~vd~~~~~~~~~~~vi~~~~fG~ 155 (455)
T 2cib_A 83 F-GEGV-VF-DASPERRKEMLHN-AALRGEQMKGHAATIEDQVRRMIADWGE---AGEIDLLDFFAELTIYTSSACLIGK 155 (455)
T ss_dssp H-C-----------------------CCHHHHHHHHHHHHHHHHHHHTTCCS---EEEEEHHHHHHHHHHHHHHHHHTCH
T ss_pred c-CCcc-cc-CcHHHHHHHhhhc-cccCHHHHHHHHHHHHHHHHHHHHHhCC---CCcEeHHHHHHHHHHHHHHHHHcCC
Confidence 1 2343 33 5999999999985 8999999999999999999999988753 4579999999999999999999999
Q ss_pred CCCCCCCcchhHHHHHHHHHHHHHhCCCCcccccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCCCCC
Q 045796 208 GTGSGAHKDHTLEMKQLLDDIMELQGVPNISDIFPVLSRFDLQGVERKCKEIALWVEKIFNSAIEKRKNLIAKGTLKFDG 287 (378)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~~ 287 (378)
+++ .... .++.+.+..+.. +...+..++|+ ++.. ..++..+..+.+.+++.++|++|++.. . . ..
T Consensus 156 ~~~-~~~~---~~~~~~~~~~~~--~~~~~~~~~p~---l~~~-~~~~~~~~~~~~~~~~~~~i~~r~~~~--~--~-~~ 220 (455)
T 2cib_A 156 KFR-DQLD---GRFAKLYHELER--GTDPLAYVDPY---LPIE-SFRRRDEARNGLVALVADIMNGRIANP--P--T-DK 220 (455)
T ss_dssp HHH-TTCC---HHHHHHHHHHHT--TCCGGGGTCTT---CSCH-HHHHHHHHHHHHHHHHHHHHHHHHHCC---------
T ss_pred Ccc-hhhh---HHHHHHHHHHHh--hhhHHHHhccc---CCCh-hHHHHHHHHHHHHHHHHHHHHHHHhcc--c--C-CC
Confidence 873 3211 345555444422 11112223443 2211 234445566778888889998887542 1 0 11
Q ss_pred CCCcHHHHHHhccccCCCCCC-CCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcCchHHHHHHHHHHHhhCCCCCccc
Q 045796 288 RNKDFLQTFIEMLDSEDSSIS-LNRTELIALLLDIILGGTDTTTTIMEWTLTKLLQFPVEMKKVQAELAEVVGLNNNVEE 366 (378)
Q Consensus 288 ~~~dll~~ll~~~~~~~~~~~-l~~~ei~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~iq~kl~~Ei~~~~~~~~~~~~ 366 (378)
..+|+++.|++...+ ++.. +++++|++++.++++||+|||+++|+|++|+|++||++|+|||+||++++++++.+++
T Consensus 221 ~~~dll~~ll~~~~~--~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~ 298 (455)
T 2cib_A 221 SDRDMLDVLIAVKAE--TGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSF 298 (455)
T ss_dssp -CCCHHHHHHHCBCT--TSSBSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHGGGCCCHHH
T ss_pred CcccHHHHHHHhhhh--cCCCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCH
Confidence 234999999987543 2334 9999999999999999999999999999999999999999999999999986667899
Q ss_pred CCCCCCcCccCC
Q 045796 367 SHLPKLKCLDAT 378 (378)
Q Consensus 367 ~~l~~LpYL~av 378 (378)
+++++||||+||
T Consensus 299 ~~l~~lpyl~a~ 310 (455)
T 2cib_A 299 HALRQIPQLENV 310 (455)
T ss_dssp HTTSCCHHHHHH
T ss_pred HHHhcCHHHHHH
Confidence 999999999985
No 19
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A*
Probab=100.00 E-value=1.6e-43 Score=341.65 Aligned_cols=298 Identities=18% Similarity=0.204 Sum_probs=229.3
Q ss_pred CCCCCCCCCCCcccccccCCCCchHHHHHHHHHHhCCceEEecCCccEEEeCCHHHHHHHHHhCCCccCCCCCccccccc
Q 045796 47 APPLPPGPRGLPLVGYLPFLGTDLYKSLTKLADAYGPIYKFWLANKLFVVVSSSSIAKEMVRDKDTIFSNRQTTVATLTP 126 (378)
Q Consensus 47 ~~~~~PgP~~~p~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~v~dpe~i~~vl~~~~~~f~~r~~~~~~~~~ 126 (378)
+.+.||||+++|++||++.+..+++ .+.+++++||||+++++++.+.|+|+||+.+++|+.+++..|+.+.... ....
T Consensus 10 ~~~~pPgp~~~P~iG~~~~~~~~~~-~~~~~~~~yg~v~~~~~~g~~~vvv~~~~~~~~il~~~~~~~~~~~~~~-~~~~ 87 (444)
T 2ve3_A 10 SLPIPPGDFGLPWLGETLNFLNDGD-FGKKRQQQFGPIFKTRLFGKNVIFISGALANRFLFTKEQETFQATWPLS-TRIL 87 (444)
T ss_dssp CCCCCCCCCCBTTTBTHHHHHHCTT-HHHHHHHHHCSSEEEEETTEEEEEECSHHHHHHHTSSCTTTEEEECCHH-HHHH
T ss_pred CCCCCCCCCCCCccccHHHHhcCcH-HHHHHHHHcCCeEEEeeCCCCEEEEcCHHHHHHHHhCCCcccccchhHH-HHHH
Confidence 3468999999999999987744456 7889999999999999888889999999999999988765565322111 1111
Q ss_pred ccCCCceeeCCCCchHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHhccCCCCcchHHhHHHHHHHHHHHHHhc
Q 045796 127 TLGGNDIVFSPYGAQWRRLRKAMVGEMMTNSSLDSCSALRKQVLKNTIRDLYNNKIGKPVDIGELSVSTSVNALENMLWG 206 (378)
Q Consensus 127 ~~~~~~~~~~~~g~~w~~~Rk~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~d~~~~~~~~t~dii~~~~fG 206 (378)
.+..++ +..+|+.|+++||++. ++|++++++.+.+.++++++++++.|.. ++++|+.+++.++++|++++++||
T Consensus 88 -~g~~~l-~~~~g~~~~~~R~~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~---~~~vd~~~~~~~~~~~vi~~~~fG 161 (444)
T 2ve3_A 88 -LGPNAL-ATQMGEIHRSRRKILY-QAFLPRTLDSYLPKMDGIVQGYLEQWGK---ANEVIWYPQLRRMTFDVAATLFMG 161 (444)
T ss_dssp -HCTTSG-GGCCHHHHHHHHHHHH-GGGCHHHHHTTHHHHHHHHHHHHHHHHH---SSEEEHHHHHHHHHHHHHHHHHTC
T ss_pred -hCcccc-ccCCchHHHHHHHHHH-hhcCHHHHHHHHHHHHHHHHHHHHHhcC---CCcEeHHHHHHHHHHHHHHHHHcC
Confidence 122244 4457999999999985 8999999999999999999999999974 568999999999999999999999
Q ss_pred CCCCCCCCcchhHHHHHHHHHHHHHhCCCCcccccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCCCC
Q 045796 207 GGTGSGAHKDHTLEMKQLLDDIMELQGVPNISDIFPVLSRFDLQGVERKCKEIALWVEKIFNSAIEKRKNLIAKGTLKFD 286 (378)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~ 286 (378)
+. ...+ .++.+.+......... +|. .++.. ..++..+..+.+.+++.++|++|++. +
T Consensus 162 -~~-~~~~----~~~~~~~~~~~~~~~~------~~~--~~p~~-~~~~~~~~~~~~~~~~~~~i~~r~~~--------~ 218 (444)
T 2ve3_A 162 -EK-VSQN----PQLFPWFETYIQGLFS------LPI--PLPNT-LFGKSQRARALLLAELEKIIKARQQQ--------P 218 (444)
T ss_dssp -HH-HHSC----TTHHHHHHHHHHHHSS------CCC--CSTTS-HHHHHHHHHHHHHHHHHHHHHHHHTS--------C
T ss_pred -CC-cccH----HHHHHHHHHHHHHHhc------CCc--cCCCc-HHHHHHHHHHHHHHHHHHHHHHHhcC--------C
Confidence 33 1111 2233333333332211 121 11111 12444556677888888888887642 2
Q ss_pred CCCCcHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcCchHHHHHHHHHHHhhCCCCCccc
Q 045796 287 GRNKDFLQTFIEMLDSEDSSISLNRTELIALLLDIILGGTDTTTTIMEWTLTKLLQFPVEMKKVQAELAEVVGLNNNVEE 366 (378)
Q Consensus 287 ~~~~dll~~ll~~~~~~~~~~~l~~~ei~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~iq~kl~~Ei~~~~~~~~~~~~ 366 (378)
....|+++.|++..++ ++..+++++|++++.++++||+|||+++|+|++++|++||++|+|||+|++++++++ .+++
T Consensus 219 ~~~~d~l~~ll~~~~~--~~~~l~~~~i~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~-~~~~ 295 (444)
T 2ve3_A 219 PSEEDALGILLAARDD--NNQPLSLPELKDQILLLLFAGHETLTSALSSFCLLLGQHSDIRERVRQEQNKLQLSQ-ELTA 295 (444)
T ss_dssp CCCSSHHHHHHHCBCT--TSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHSSCCSS-CCCH
T ss_pred CCccCHHHHHHhcccc--CCCCCCHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHCHHHHHHHHHHHHHhccCC-CCCh
Confidence 2457999999987543 245699999999999999999999999999999999999999999999999998854 7899
Q ss_pred CCCCCCcCccCC
Q 045796 367 SHLPKLKCLDAT 378 (378)
Q Consensus 367 ~~l~~LpYL~av 378 (378)
+++++||||+||
T Consensus 296 ~~l~~lpyl~a~ 307 (444)
T 2ve3_A 296 ETLKKMPYLDQV 307 (444)
T ss_dssp HHHTTCHHHHHH
T ss_pred hhhhcChHHHHH
Confidence 999999999985
No 20
>3i3k_A Lanosterol 14-alpha demethylase; cytochrome P450, hemeprotein, alternative splicing, cholesterol biosynthesis, endoplasmic reticulum, heme, iron; HET: HEM KLN BCD; 2.80A {Homo sapiens} PDB: 3jus_A* 3juv_A* 3ld6_A*
Probab=100.00 E-value=5e-43 Score=339.55 Aligned_cols=308 Identities=19% Similarity=0.240 Sum_probs=237.0
Q ss_pred CCCCCCC-CCCCcccccccCCCCchHHHHHHHHHHhCCceEEecCCccEEEeCCHHHHHHHHHhCCCccCCCCCcccccc
Q 045796 47 APPLPPG-PRGLPLVGYLPFLGTDLYKSLTKLADAYGPIYKFWLANKLFVVVSSSSIAKEMVRDKDTIFSNRQTTVATLT 125 (378)
Q Consensus 47 ~~~~~Pg-P~~~p~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~v~dpe~i~~vl~~~~~~f~~r~~~~~~~~ 125 (378)
..+.||| |+++|++||++.+..+++..+.+|+++|||||++++|+.+.|+|++|++++++|.++...|..++.+.....
T Consensus 9 ~~~~PPg~P~~lP~iG~l~~~~~~~~~~~~~~~~~yG~v~~l~l~g~~~vvv~~~~~~~~il~~~~~~~~~~~~~~~~~~ 88 (461)
T 3i3k_A 9 GVKSPPYIFSPIPFLGHAIAFGKSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYSRLTT 88 (461)
T ss_dssp -CCCCCBCCCSSTTTBTHHHHHHCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHHHHHHHHH
T ss_pred CCCCCCCCCCCCCccccHHhhccCHHHHHHHHHHHhCCEEEEEecCceEEEEeChHHHHHHHhccccccccchHHHHhhh
Confidence 4578999 889999999998877789999999999999999999999999999999999999887655554322111101
Q ss_pred cccCCCceeeCCCCchHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHhccCCCCcchHHhHHHHHHHHHHHHHh
Q 045796 126 PTLGGNDIVFSPYGAQWRRLRKAMVGEMMTNSSLDSCSALRKQVLKNTIRDLYNNKIGKPVDIGELSVSTSVNALENMLW 205 (378)
Q Consensus 126 ~~~~~~~~~~~~~g~~w~~~Rk~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~d~~~~~~~~t~dii~~~~f 205 (378)
.. .|.|++++.+|+.|+++||++. +.|+++.++++.+.++++++++++.|.. +..+|+.+.+..++++++++++|
T Consensus 89 ~~-~g~g~~~~~~g~~w~~~Rr~~~-~~f~~~~l~~~~~~~~~~~~~ll~~l~~---~~~~dl~~~~~~~~~~~~~~~~~ 163 (461)
T 3i3k_A 89 PV-FGKGVAYDVPNPVFLEQKKMLK-SGLNIAHFKQHVSIIEKETKEYFESWGE---SGEKNVFEALSELIILTASHCLH 163 (461)
T ss_dssp HH-HCTTSGGGSCHHHHHHHHHHHH-HHSSHHHHHHHHHHHHHHHHHHGGGGCS---EEEEEHHHHHHHHHHHHHHHHHT
T ss_pred hh-cCCeeeeCCCcHHHHHHHHHHh-hhhCHHHHHHHHHHHHHHHHHHHHHhhh---cCCcCHHHHHHHHHHHHHHHHHc
Confidence 11 2456667667999999999985 7899999999999999999999988863 34689999999999999999999
Q ss_pred cCCCCCCCCcchhHHHHHHHHHHHHHhCCCCcccccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCCC
Q 045796 206 GGGTGSGAHKDHTLEMKQLLDDIMELQGVPNISDIFPVLSRFDLQGVERKCKEIALWVEKIFNSAIEKRKNLIAKGTLKF 285 (378)
Q Consensus 206 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~ 285 (378)
|.++ ..... ..+.+.+..+... .......+|. |++.. ..++..+..+.+.+++.+.++++++.
T Consensus 164 G~~~-~~~~~---~~~~~~~~~~~~~--~~~~~~~~P~--~l~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~-------- 226 (461)
T 3i3k_A 164 GKEI-RSQLN---EKVAQLYADLDGG--FSHAAWLLPG--WLPLP-SFRRRDRAHREIKDIFYKAIQKRRQS-------- 226 (461)
T ss_dssp CHHH-HHTCC---HHHHHHHHHHHTT--SSHHHHHSCT--TSCCH-HHHHHHHHHHHHHHHHHHHHHHHTTC--------
T ss_pred cHhh-hhHHH---HHHHHHHHHHHhc--cccchhhccc--ccCCH-HHHHHHHHHHHHHHHHHHHHHHHHhc--------
Confidence 9876 22211 2233333322211 1011112332 33322 23555666777888888888776542
Q ss_pred CCCCCcHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcCchHHHHHHHHHHHhhCCC-CCc
Q 045796 286 DGRNKDFLQTFIEMLDSEDSSISLNRTELIALLLDIILGGTDTTTTIMEWTLTKLLQFPVEMKKVQAELAEVVGLN-NNV 364 (378)
Q Consensus 286 ~~~~~dll~~ll~~~~~~~~~~~l~~~ei~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~iq~kl~~Ei~~~~~~~-~~~ 364 (378)
.....|+++.|++...+ ++..+++++|++++.++++||+|||+++++|++++|++||++|+|+|+||++++|++ ..+
T Consensus 227 ~~~~~d~l~~ll~~~~~--~~~~l~~~~i~~~~~~l~~ag~~Tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~ 304 (461)
T 3i3k_A 227 QEKIDDILQTLLDATYK--DGRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGENLPPL 304 (461)
T ss_dssp CCCCCSHHHHHHTCBCT--TSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCTTCCCC
T ss_pred ccccccHHHHHHHhhhc--cCCCCCHHHHHHHHHHHHhhccHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcCCCCCC
Confidence 23468999999987643 245699999999999999999999999999999999999999999999999999864 346
Q ss_pred ccCCCCCCcCccCC
Q 045796 365 EESHLPKLKCLDAT 378 (378)
Q Consensus 365 ~~~~l~~LpYL~av 378 (378)
+++++.+||||+||
T Consensus 305 ~~~~~~~l~~l~a~ 318 (461)
T 3i3k_A 305 TYDQLKDLNLLDRC 318 (461)
T ss_dssp CHHHHHTCHHHHHH
T ss_pred CHHHHhcChHHHHH
Confidence 89999999999885
No 21
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A*
Probab=100.00 E-value=7.7e-43 Score=338.86 Aligned_cols=302 Identities=18% Similarity=0.252 Sum_probs=210.6
Q ss_pred CCCCCCCCCcccccccCCCCchHHHHHHHHHHhCCceEEecCCccEEEeCCHHHHHHHHHhCCCccCCCCCcc-cccccc
Q 045796 49 PLPPGPRGLPLVGYLPFLGTDLYKSLTKLADAYGPIYKFWLANKLFVVVSSSSIAKEMVRDKDTIFSNRQTTV-ATLTPT 127 (378)
Q Consensus 49 ~~~PgP~~~p~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~v~dpe~i~~vl~~~~~~f~~r~~~~-~~~~~~ 127 (378)
..||||+++|++||++.+..+++..+.++++ ||||+++++|+.+.++|+||+.+++|+.++ .|..++... .....
T Consensus 23 eppPgP~~~P~iG~~~~~~~~p~~~~~~l~~-yGpv~~~~~g~~~~~vv~~~~~i~~il~~~--~~~~~~~~~~~~~~~- 98 (467)
T 3dbg_A 23 EPPVAGGGVPLLGHGWRLARDPLAFMSQLRD-HGDVVRIKLGPKTVYAVTNPELTGALALNP--DYHIAGPLWESLEGL- 98 (467)
T ss_dssp BCCEECCCCSTTHHHHHHHHCHHHHHHHHGG-GCSEEEEEETTEEEEEECSHHHHHHHHHCT--TC--------------
T ss_pred CCCCCCCCCCcccchHHhccCHHHHHHHHHH-hCCEEEEEeCCccEEEECCHHHHHHHHhCc--CcccccchHHHHHHh-
Confidence 3478999999999999886678889999988 999999999999999999999999999876 563333221 11111
Q ss_pred cCCCceeeCCCCchHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHhccCCCCcchHHhHHHHHHHHHHHHHhcC
Q 045796 128 LGGNDIVFSPYGAQWRRLRKAMVGEMMTNSSLDSCSALRKQVLKNTIRDLYNNKIGKPVDIGELSVSTSVNALENMLWGG 207 (378)
Q Consensus 128 ~~~~~~~~~~~g~~w~~~Rk~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~d~~~~~~~~t~dii~~~~fG~ 207 (378)
.+..+ +++.+|+.|+++||++. ++|+++.++.+.+.++++++++++.|.. ++++|+.+++.++++|+++.++||.
T Consensus 99 ~g~~~-l~~~dg~~h~~~R~~l~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~---~~~~d~~~~~~~~~~~vi~~~~~g~ 173 (467)
T 3dbg_A 99 LGKEG-VATANGPLHRRQRRTIQ-PAFRLDAIPAYGPIMEEEAHALTERWQP---GKTVDATSESFRVAVRVAARCLLRG 173 (467)
T ss_dssp ------------------CGGGH-HHHSTTTSTTTHHHHHHHHHHHHHHSCT---TSCEEHHHHHHHHHHHHHHHHHSCS
T ss_pred cCCCC-cccCCcHHHHHHHHHhh-hhhCHHHHHHHHHHHHHHHHHHHHHhcc---CCcCcHHHHHHHHHHHHHHHHHhCC
Confidence 12134 45567999999999985 8999999999999999999999999863 6789999999999999999999998
Q ss_pred CCCCCCCcchhHHHHHHHHHHHHHhCCCCccccccc--ccccCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCCC
Q 045796 208 GTGSGAHKDHTLEMKQLLDDIMELQGVPNISDIFPV--LSRFDLQGVERKCKEIALWVEKIFNSAIEKRKNLIAKGTLKF 285 (378)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~ 285 (378)
+++ . .....+...+..++.... ...++|+ +.+++. ...++..+..+.+.+++.++++++++.
T Consensus 174 ~~~-~---~~~~~~~~~~~~~~~~~~---~~~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~r~~~-------- 237 (467)
T 3dbg_A 174 QYM-D---ERAERLCVALATVFRGMY---RRMVVPLGPLYRLPL-PANRRFNDALADLHLLVDEIIAERRAS-------- 237 (467)
T ss_dssp SCC-H---HHHHHHHHHHHHHHHC----------------------------CCHHHHHHHHHHHHHHHTTC--------
T ss_pred ccc-c---hhHHHHHHHHHHHHHHHH---HHhccchhhhhhCCC-hHhHHHHHHHHHHHHHHHHHHHHHHhc--------
Confidence 873 2 123445555555443221 1223443 223321 122444555667788888888777542
Q ss_pred CCCCCcHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcCchHHHHHHHHHHHhhCCCCCcc
Q 045796 286 DGRNKDFLQTFIEMLDSEDSSISLNRTELIALLLDIILGGTDTTTTIMEWTLTKLLQFPVEMKKVQAELAEVVGLNNNVE 365 (378)
Q Consensus 286 ~~~~~dll~~ll~~~~~~~~~~~l~~~ei~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~iq~kl~~Ei~~~~~~~~~~~ 365 (378)
+....|+++.|++..++ ++..+++++|++++.++++||+|||+++|+|++|+|++||++|+|||+|+++++++ +.++
T Consensus 238 ~~~~~dll~~ll~~~~~--~~~~ls~~ei~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~-~~~~ 314 (467)
T 3dbg_A 238 GQKPDDLLTALLEAKDD--NGDPIGEQEIHDQVVAILTPGSETIASTIMWLLQALADHPEHADRIRDEVEAVTGG-RPVA 314 (467)
T ss_dssp CSSCCSHHHHHTTC----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTT-SCCC
T ss_pred CCCchHHHHHHHhhccC--CCCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCC-CCCC
Confidence 23457999999987543 23469999999999999999999999999999999999999999999999999985 6789
Q ss_pred cCCCCCCcCccCC
Q 045796 366 ESHLPKLKCLDAT 378 (378)
Q Consensus 366 ~~~l~~LpYL~av 378 (378)
++++++||||+||
T Consensus 315 ~~~l~~l~yl~a~ 327 (467)
T 3dbg_A 315 FEDVRKLRHTGNV 327 (467)
T ss_dssp HHHHTTCHHHHHH
T ss_pred HHHHhhCHHHHHH
Confidence 9999999999875
No 22
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* 4enh_A* 4fia_A*
Probab=100.00 E-value=1.1e-41 Score=329.72 Aligned_cols=294 Identities=17% Similarity=0.241 Sum_probs=224.2
Q ss_pred CCchHHHHHHHHHHhCCceEEecCCccEEEeCCHHHHHHHHHhCCCccCCCCCcccc--cccc--cCCCceeeCCCCchH
Q 045796 67 GTDLYKSLTKLADAYGPIYKFWLANKLFVVVSSSSIAKEMVRDKDTIFSNRQTTVAT--LTPT--LGGNDIVFSPYGAQW 142 (378)
Q Consensus 67 ~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~v~dpe~i~~vl~~~~~~f~~r~~~~~~--~~~~--~~~~~~~~~~~g~~w 142 (378)
++.+|..+.+|+++|||||++++|+.+.|+|+||+++++||.++ .|.+++..... .... ..+.|++++.+|+.|
T Consensus 9 g~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~~~~il~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w 86 (456)
T 3mdm_A 9 GRVLQDVFLDWAKKYGPVVRVNVFHKTSVIVTSPESVKKFLMST--KYNKDSKMYRALQTVFGERLFGQGLVSECNYERW 86 (456)
T ss_dssp CCCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHTCT--TSCCCHHHHHHHHEETTEESSTTSTTTCCCHHHH
T ss_pred cchHHHHHHHHHHHhCCeEEEEeCCCCEEEECCHHHHHHHHhhc--cccccchhHHHHHHhhcccccCCCcccCCChHHH
Confidence 45679999999999999999999999999999999999999753 35444322110 0110 124556666679999
Q ss_pred HHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHhcc-CCCCcchHHhHHHHHHHHHHHHHhcCCCCCCCCcchhHHH
Q 045796 143 RRLRKAMVGEMMTNSSLDSCSALRKQVLKNTIRDLYNNK-IGKPVDIGELSVSTSVNALENMLWGGGTGSGAHKDHTLEM 221 (378)
Q Consensus 143 ~~~Rk~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~-~~~~~d~~~~~~~~t~dii~~~~fG~~~~~~~~~~~~~~~ 221 (378)
+++||++. ++|++++++.+.+.++++++++++.+...+ ++.++|+.+++.++++|++++++||.+++ .... ...++
T Consensus 87 ~~~Rr~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~fG~~~~-~~~~-~~~~~ 163 (456)
T 3mdm_A 87 HKQRRVID-LAFSRSSLVSLMETFNEKAEQLVEILEAKADGQTPVSMQDMLTYTAMDILAKAAFGMETS-MLLG-AQKPL 163 (456)
T ss_dssp HHHHHHHG-GGGSHHHHHTTHHHHHHHHHHHHHHHHHTCSSSSCEEHHHHHHHHHHHHHHHHHHSCCCC-GGGT-CCHHH
T ss_pred HHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeeHHHHHHHHHHHHHHHHHcCCChh-hhcc-cccHH
Confidence 99999985 899999999999999999999999998754 45689999999999999999999999984 2211 12344
Q ss_pred HHHHHHHHHHhCCCCcccccccccccCcc-chHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCCCCCCCCcHHHHHHhcc
Q 045796 222 KQLLDDIMELQGVPNISDIFPVLSRFDLQ-GVERKCKEIALWVEKIFNSAIEKRKNLIAKGTLKFDGRNKDFLQTFIEML 300 (378)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~P~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~~~~~dll~~ll~~~ 300 (378)
.+.+..++..... ...|++.+++.. ...+......+.+.+++.++++++++..... .....|+++.|++..
T Consensus 164 ~~~~~~~~~~~~~----~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~----~~~~~d~l~~ll~~~ 235 (456)
T 3mdm_A 164 SQAVKLMLEGITA----SRNTLAKFLPGKRKQLREVRESIRFLRQVGRDWVQRRREALKRG----EEVPADILTQILKAE 235 (456)
T ss_dssp HHHHHHHHHHHHH----HHHSCGGGCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT----CCCCCCHHHHHHHHT
T ss_pred HHHHHHHHHHHHH----HHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc----ccchhhHHHHHHHhc
Confidence 4444444432211 012333333321 1123445556677788888888887654211 234679999999864
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcCchHHHHHHHHHHHhhCCCCCcccCCCCCCcCccCC
Q 045796 301 DSEDSSISLNRTELIALLLDIILGGTDTTTTIMEWTLTKLLQFPVEMKKVQAELAEVVGLNNNVEESHLPKLKCLDAT 378 (378)
Q Consensus 301 ~~~~~~~~l~~~ei~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~iq~kl~~Ei~~~~~~~~~~~~~~l~~LpYL~av 378 (378)
. ..++++++++++.++++||+|||+++|+|++|+|++||++|+|||+||++++|+++.++++++++||||+||
T Consensus 236 ~-----~~~~~~~l~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~lpyl~a~ 308 (456)
T 3mdm_A 236 E-----GAQDDEGLLDNFVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSKRYLDFEDLGRLQYLSQV 308 (456)
T ss_dssp S-----SCSSSHHHHHHHHHHHHHTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCSSCCHHHHHHCHHHHHH
T ss_pred C-----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHcCCCCCCCHHHHhcCHHHHHH
Confidence 2 357889999999999999999999999999999999999999999999999998788999999999999986
No 23
>3v8d_A Cholesterol 7-alpha-monooxygenase; cytochrome, oxidoreductase; HET: HEM 0GV; 1.90A {Homo sapiens} PDB: 3sn5_A* 3dax_A*
Probab=100.00 E-value=6.4e-40 Score=320.25 Aligned_cols=306 Identities=12% Similarity=0.172 Sum_probs=224.3
Q ss_pred CCCCCCCCCCC-CcccccccCCCCchHHHHHHHHHHhCCceEEecCCccEEEeCCHHHHHHHHHhCCC-ccCCCCCcccc
Q 045796 46 TAPPLPPGPRG-LPLVGYLPFLGTDLYKSLTKLADAYGPIYKFWLANKLFVVVSSSSIAKEMVRDKDT-IFSNRQTTVAT 123 (378)
Q Consensus 46 ~~~~~~PgP~~-~p~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~v~dpe~i~~vl~~~~~-~f~~r~~~~~~ 123 (378)
...++||||++ +|++||++.+..+++..+.+|+++||||+++++|+.++++|+||+++++||.++.. .|..++.....
T Consensus 10 ~~~~~PPgp~~~lPliG~~~~~~~~p~~~~~~l~~~yGpv~~~~lg~~~~vvv~~p~~v~~vl~~~~~~~~~~~~~~~~~ 89 (491)
T 3v8d_A 10 RQTGEPPLENGLIPYLGCALQFGANPLEFLRANQRKHGHVFTCKLMGKYVHFITNPLSYHKVLCHGKYFDWKKFHFALSA 89 (491)
T ss_dssp CCTTSCCEEEEEESSTTTTGGGTCCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGHHHHHSCCTTEESSHHHHHHHH
T ss_pred cCCCCCCCCCCCcceeccHHHHhcCHHHHHHHHHHHcCCceEEEECCEEEEEEcCHHHHHHHHhcCCccchHHHHHHHHH
Confidence 34578999999 69999999998889999999999999999999999999999999999999976542 23322211111
Q ss_pred cccccCCCceeeCCCCchHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHhcc----CCCCcchHHhHHHHHHHH
Q 045796 124 LTPTLGGNDIVFSPYGAQWRRLRKAMVGEMMTNSSLDSCSALRKQVLKNTIRDLYNNK----IGKPVDIGELSVSTSVNA 199 (378)
Q Consensus 124 ~~~~~~~~~~~~~~~g~~w~~~Rk~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~----~~~~~d~~~~~~~~t~di 199 (378)
..+ +.+.+...+|+.|+++|+.+. ++|++++++.+.+.+.++++++++.+.... .....|+.+++..+++++
T Consensus 90 ~~~---g~~~~~~~~g~~~~~~Rr~~~-~~f~~~~l~~~~~~i~~~~~~ll~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 165 (491)
T 3v8d_A 90 KAF---GHRSIDPMDGNTTENINDTFI-KTLQGHALNSLTESMMENLQRIMRPPVSSNSKTAAWVTEGMYSFCYRVMFEA 165 (491)
T ss_dssp HHH---TCCCCCGGGSSBCCCHHHHHH-HHHSHHHHHHHHHHHHHHHHHHHSCCSSCGGGGCSCEEEEHHHHHHHHHHHH
T ss_pred Hhc---CCcccccccchhHHHHHHHHH-HHcCccchHHHHHHHHHHHHHHHHhhhhcccCCCCCcccCHHHHHHHHHHHH
Confidence 112 223334456999999999875 899999999999999999999887543211 124578999999999999
Q ss_pred HHHHHhcCCCCCCCCcchhHHHHHHHHHHHHHhCCCCcccccccccc-cCccchHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 045796 200 LENMLWGGGTGSGAHKDHTLEMKQLLDDIMELQGVPNISDIFPVLSR-FDLQGVERKCKEIALWVEKIFNSAIEKRKNLI 278 (378)
Q Consensus 200 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~ 278 (378)
++..+||.+. ...+ .....+.+.++.+... .+.+|.+.+ ++ ....++..+..+.+.+++.+.++++
T Consensus 166 ~~~~~fG~~~-~~~~-~~~~~~~~~~~~~~~~------~~~~~~l~~~~p-~~~~~~~~~a~~~l~~~~~~~~~~~---- 232 (491)
T 3v8d_A 166 GYLTIFGRDL-TRRD-TQKAHILNNLDNFKQF------DKVFPALVAGLP-IHMFRTAHNAREKLAESLRHENLQK---- 232 (491)
T ss_dssp HHHHHHCBCC-SCGG-GHHHHHHHHHHHHHHH------HHHHHHHHTTCC-GGGCHHHHHHHHHHHHHTSHHHHTT----
T ss_pred HHHHHcCccc-cccc-hhhhhhHHHHHHHHHH------HHHHHHHHhcCC-hHHHHHHHHHHHHHHHHHHHHHHhc----
Confidence 9999999887 3222 1233344444333221 223444322 22 1223444444555544444333221
Q ss_pred hhCCCCCCCCCCcHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcCchHHHHHHHHHHHhh
Q 045796 279 AKGTLKFDGRNKDFLQTFIEMLDSEDSSISLNRTELIALLLDIILGGTDTTTTIMEWTLTKLLQFPVEMKKVQAELAEVV 358 (378)
Q Consensus 279 ~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~ei~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~iq~kl~~Ei~~~~ 358 (378)
.....|+++.+++..++ +..++++|+.++++.+++||+|||+++++|++++|++||++|+|+|+||++++
T Consensus 233 -------~~~~~d~l~~l~~~~~~---~~~~~~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~ 302 (491)
T 3v8d_A 233 -------RESISELISLRMFLNDT---LSTFDDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTL 302 (491)
T ss_dssp -------CBSCCHHHHHHHHHHHH---HBCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSHHHHHHHHHHHHHHH
T ss_pred -------cccccHHHHHHHHHhhc---cCCCchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHh
Confidence 12357999999986543 23689999999999999999999999999999999999999999999999998
Q ss_pred CCC----------CCcccCCCCCCcCccCC
Q 045796 359 GLN----------NNVEESHLPKLKCLDAT 378 (378)
Q Consensus 359 ~~~----------~~~~~~~l~~LpYL~av 378 (378)
+++ ..++++++.+||||+||
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~l~~~~~l~a~ 332 (491)
T 3v8d_A 303 ENAGQKVSLEGNPICLSQAELNDLPVLDSI 332 (491)
T ss_dssp HHTTCCCCSSSSCCCCCHHHHHCCHHHHHH
T ss_pred hccccccccccccccCCHHHHhcChHHHHH
Confidence 642 34688889999999875
No 24
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A*
Probab=100.00 E-value=4.9e-39 Score=313.82 Aligned_cols=306 Identities=13% Similarity=0.186 Sum_probs=210.6
Q ss_pred CCCCCCCCCCC-CcccccccCCCCchHHHHHHHHHHhCCceEEecCCccEEEeCCHHHHHHHHHhCCCccCCCCCcc-cc
Q 045796 46 TAPPLPPGPRG-LPLVGYLPFLGTDLYKSLTKLADAYGPIYKFWLANKLFVVVSSSSIAKEMVRDKDTIFSNRQTTV-AT 123 (378)
Q Consensus 46 ~~~~~~PgP~~-~p~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~v~dpe~i~~vl~~~~~~f~~r~~~~-~~ 123 (378)
...+.||||++ +|++||++++..+++..+.+|+++||+||++++|+.++|+|+||+++++|+.++.. ++.++... ..
T Consensus 10 ~~~~~pPgp~~~~P~iG~~~~~~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~~~~il~~~~~-~~~~~~~~~~~ 88 (491)
T 3dax_A 10 RQTGEPPLENGLIPYLGCALQFGANPLEFLRANQRKHGHVFTCKLMGKYVHFITNPLSYHKVLCHGKY-FDWKKFHFATS 88 (491)
T ss_dssp CCTTCCCEEEEEESCTTTTGGGTCCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGTHHHHSCCTT-EESSHHHHHHH
T ss_pred cCCCCCCcCCCcccchhhHHHHhhCHHHHHHHHHHhcCCeEEEEECCeEEEEEcChHHHHHHHcCCcc-CChHHHHHHHH
Confidence 34568999998 89999999987778999999999999999999999999999999999999976542 22222111 01
Q ss_pred cccccCCCceeeCCCCchHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHhc---c-CCCCcchHHhHHHHHHHH
Q 045796 124 LTPTLGGNDIVFSPYGAQWRRLRKAMVGEMMTNSSLDSCSALRKQVLKNTIRDLYNN---K-IGKPVDIGELSVSTSVNA 199 (378)
Q Consensus 124 ~~~~~~~~~~~~~~~g~~w~~~Rk~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~---~-~~~~~d~~~~~~~~t~di 199 (378)
... . +.+++...+|+.|+++|+.+. ++|+.+.++.+.+.+.+.+.++++..... . ....+|+..++..+++++
T Consensus 89 ~~~-~-g~~~~~~~~g~~w~~~r~~~~-~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ 165 (491)
T 3dax_A 89 AKA-F-GHRSIDPMDGNTTENINDTFI-KTLQGHALNSLTESMMENLQRIMRPPVSSNSKTAAWVTEGMYSFCYRVMFEA 165 (491)
T ss_dssp HHH-H-TCCCCCGGGTSBCCCHHHHHH-HHHSHHHHHHHHHHHHHHHHHHHC----------CCEEEEHHHHHHHHHHHH
T ss_pred HHH-c-CCCcccccchhHHHHHHHHHH-HhcCcccHHHHHHHHHHHHHHHHHhhccCCcCCCCceeccHHHHHHHHHHHH
Confidence 111 1 233332445899999999885 78999999888888877777766554321 0 113578889999999999
Q ss_pred HHHHHhcCCCCCCCCcchhHHHHHHHHHHHHHhCCCCccccccccc-ccCccchHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 045796 200 LENMLWGGGTGSGAHKDHTLEMKQLLDDIMELQGVPNISDIFPVLS-RFDLQGVERKCKEIALWVEKIFNSAIEKRKNLI 278 (378)
Q Consensus 200 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~ 278 (378)
++.++||.+. ...+. ....+.+.+..+.. +...+|++. +++. ...++..+..+.+.+. +++++.+.
T Consensus 166 ~~~~~fG~~~-~~~~~-~~~~~~~~~~~~~~------~~~~~p~l~~~lp~-~~~~~~~~~~~~~~~~---~~~~~~~~- 232 (491)
T 3dax_A 166 GYLTIFGRDL-TRRDT-QKAHILNNLDNFKQ------FDKVFPALVAGLPI-HMFRTAHNAREKLAES---LRHENLQK- 232 (491)
T ss_dssp HHHHHHCBCS-TTGGG-HHHHHHHHHHHHHH------HHHHHHHHHTTCCG-GGSHHHHHHHHHHHHH---TSHHHHTT-
T ss_pred hHHHHcCccc-ccccc-hhhhhhHHHHHHHH------HHHHhHHHHHhCCH-hhhhHHHHHHHHHHHH---HHHHHhhc-
Confidence 9999999877 33211 11112222221111 123456432 2331 1123333333322222 22222221
Q ss_pred hhCCCCCCCCCCcHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcCchHHHHHHHHHHHhh
Q 045796 279 AKGTLKFDGRNKDFLQTFIEMLDSEDSSISLNRTELIALLLDIILGGTDTTTTIMEWTLTKLLQFPVEMKKVQAELAEVV 358 (378)
Q Consensus 279 ~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~ei~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~iq~kl~~Ei~~~~ 358 (378)
.....|+++.+++...+ ...+++++++++++++++||+|||+++++|++++|++||++|+|+|+||++++
T Consensus 233 -------~~~~~d~l~~ll~~~~~---~~~~~~~~i~~~~~~~~~ag~~tta~tl~~~l~~L~~~P~~~~kl~~Ei~~v~ 302 (491)
T 3dax_A 233 -------RESISELISLRMFLNDT---LSTFDDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTL 302 (491)
T ss_dssp -------CBSCCHHHHHHHHHHHH---HBCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSHHHHHHHHHHHHHHH
T ss_pred -------ccchhHHHHHHHHHHHh---cCCChHHHHHHHHHHHHHHhccchHHHHHHHHHHHHcCHHHHHHHHHHHHHHh
Confidence 22357999999876432 12578999999999999999999999999999999999999999999999998
Q ss_pred CCCC----------CcccCCCCCCcCccCC
Q 045796 359 GLNN----------NVEESHLPKLKCLDAT 378 (378)
Q Consensus 359 ~~~~----------~~~~~~l~~LpYL~av 378 (378)
++++ .++++++++||||+||
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~l~~lpyl~a~ 332 (491)
T 3dax_A 303 ENAGQKVSLEGNPICLSQAELNDLPVLDSI 332 (491)
T ss_dssp HTTTCCCCSSSCCCCCCHHHHHCCHHHHHH
T ss_pred hccccccccCCCccccCHHHHhcCHHHHHH
Confidence 7532 3589999999999986
No 25
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A*
Probab=100.00 E-value=1.2e-36 Score=297.61 Aligned_cols=307 Identities=14% Similarity=0.138 Sum_probs=204.1
Q ss_pred CCCCCCCCCC-CcccccccCCCCchHHHHHHHHHHhCCceEEecCCccEEEeCCHHHHHHHHHhCCCccCCCCCcc-ccc
Q 045796 47 APPLPPGPRG-LPLVGYLPFLGTDLYKSLTKLADAYGPIYKFWLANKLFVVVSSSSIAKEMVRDKDTIFSNRQTTV-ATL 124 (378)
Q Consensus 47 ~~~~~PgP~~-~p~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~v~dpe~i~~vl~~~~~~f~~r~~~~-~~~ 124 (378)
..+.||||++ +|++||++.+..+++..+.+|+++|||||++++|+.++|+++||+++++++.++...++.++... ...
T Consensus 16 ~~~~PPgp~~~~P~iG~~~~~~~~~~~~~~~l~~kYG~i~~v~lg~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~~~ 95 (498)
T 3b6h_A 16 RPGEPPLDLGSIPWLGYALDFGKDAASFLTRMKEKHGDIFTILVGGRYVTVLLDPHSYDAVVWEPRTRLDFHAYAIFLME 95 (498)
T ss_dssp CTTCCCEECCSSTTTBTHHHHHHCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGHHHHHTCCTTTEECCHHHHHHHH
T ss_pred CCCCCCCCCCCCcchhhHHHhccCHHHHHHHHHHHcCCeEEEEECCeeEEEEcCHHHHHHHHhCccccCCchhhHHHHHH
Confidence 4468999998 89999999886667999999999999999999999999999999999999977653233332211 111
Q ss_pred ccccCCCceeeCCCCchHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHhcc--CCCCcchHHhHHHHHHHHHHH
Q 045796 125 TPTLGGNDIVFSPYGAQWRRLRKAMVGEMMTNSSLDSCSALRKQVLKNTIRDLYNNK--IGKPVDIGELSVSTSVNALEN 202 (378)
Q Consensus 125 ~~~~~~~~~~~~~~g~~w~~~Rk~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~--~~~~~d~~~~~~~~t~dii~~ 202 (378)
.. .+.+++ ..+|+.|+ |++. ++|+.+.++.+.+.+.+.+...++...... ....+++..++..+++++++.
T Consensus 96 ~~--~g~~~~-~~~~~~~r---r~~~-~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~vi~~~~~~ 168 (498)
T 3b6h_A 96 RI--FDVQLP-HYSPSDEK---ARMK-LTLLHRELQALTEAMYTNLHAVLLGDATEAGSGWHEMGLLDFSYSFLLRAGYL 168 (498)
T ss_dssp HT--SCCCCT-TCCHHHHH---HHHH-TTSSHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCEEEEHHHHHHHHHHHHHHH
T ss_pred HH--cCCCcc-ccCHHHHH---HHHH-HhhchHhHHHHHHHHHHHHHHHHhhcccccCCCcceecHHHHHHHHHHHHHHH
Confidence 11 133433 34577764 4443 688888888887777777777666543211 112478888999999999999
Q ss_pred HHhcCCCCCCCCcchhHHHHHHHHHHHHHhCCCCcccccccccc-cCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhC
Q 045796 203 MLWGGGTGSGAHKDHTLEMKQLLDDIMELQGVPNISDIFPVLSR-FDLQGVERKCKEIALWVEKIFNSAIEKRKNLIAKG 281 (378)
Q Consensus 203 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~ 281 (378)
++||.++ ...+.....+..+.+..++.... .+.+.+|++.+ +......++..+..+.+. ..+++++.+.
T Consensus 169 ~~fG~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~---- 238 (498)
T 3b6h_A 169 TLYGIEA-LPRTHESQAQDRVHSADVFHTFR--QLDRLLPKLARGSLSVGDKDHMCSVKSRLW---KLLSPARLAR---- 238 (498)
T ss_dssp HHHCBSC-SSCCHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHTCCCHHHHHHHHHHHHHHH---HHTCHHHHTT----
T ss_pred hhcCccc-ccccccchhhHHHhhHHHHHHHH--HHHhhHHHHHHHhcCchhhHHHHHHHHHHH---HHHHHHHHhc----
Confidence 9999887 33221111112222222222111 11234564322 111111122222222222 2222222211
Q ss_pred CCCCCCCCCcHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcCchHHHHHHHHHHHhhCCC
Q 045796 282 TLKFDGRNKDFLQTFIEMLDSEDSSISLNRTELIALLLDIILGGTDTTTTIMEWTLTKLLQFPVEMKKVQAELAEVVGLN 361 (378)
Q Consensus 282 ~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~ei~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~iq~kl~~Ei~~~~~~~ 361 (378)
.....|+++.+++..++ ...++++++. +++++++||+|||+++++|++++|++||++|+|+|+||++++|++
T Consensus 239 ----~~~~~d~l~~ll~~~~~---~~~~~~~~~~-~~~~~l~ag~~tt~~~l~~~l~~L~~~P~~~~kl~~Ei~~v~~~~ 310 (498)
T 3b6h_A 239 ----RAHRSKWLESYLLHLEE---MGVSEEMQAR-ALVLQLWATQGNMGPAAFWLLLFLLKNPEALAAVRGELESILWQA 310 (498)
T ss_dssp ----CBSCCHHHHHHHHHHHH---TTCCHHHHHH-HHHHHHHHHHTTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHC-
T ss_pred ----cccHHHHHHHHHHHHHh---CCCCHHHHHH-HHHHHHHHhhhchHHHHHHHHHHHHcCHHHHHHHHHHHHHHhccc
Confidence 22357999999976543 2346778888 899999999999999999999999999999999999999999864
Q ss_pred C-------CcccCCCCCCcCccCC
Q 045796 362 N-------NVEESHLPKLKCLDAT 378 (378)
Q Consensus 362 ~-------~~~~~~l~~LpYL~av 378 (378)
+ .++++|+++||||+||
T Consensus 311 ~~~~~~~~~~~~~~l~~lpyl~a~ 334 (498)
T 3b6h_A 311 EQPVSQTTTLPQKVLDSTPVLDSV 334 (498)
T ss_dssp ---------CCTHHHHSCHHHHHH
T ss_pred CCCCCcccccCHHHHhcCHHHHHH
Confidence 3 2599999999999986
No 26
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A*
Probab=100.00 E-value=1.6e-35 Score=284.84 Aligned_cols=263 Identities=14% Similarity=0.210 Sum_probs=196.3
Q ss_pred CCCCCCCCCccccccc-CCCCchHHHHHHHHHHhCCceEEec-CCccEEEeCCHHHHHHHHHhCCCccCCCCCccccccc
Q 045796 49 PLPPGPRGLPLVGYLP-FLGTDLYKSLTKLADAYGPIYKFWL-ANKLFVVVSSSSIAKEMVRDKDTIFSNRQTTVATLTP 126 (378)
Q Consensus 49 ~~~PgP~~~p~lG~~~-~l~~~~~~~~~~~~~~yG~i~~~~~-g~~~~v~v~dpe~i~~vl~~~~~~f~~r~~~~~~~~~ 126 (378)
+.||||+++|++|++. .+..+++..+.++ ++||||+++++ |+.++++|+||+++++||.++ .|++++........
T Consensus 26 ~~~PGP~~~p~lG~~~~~~~~~p~~~~~~l-~~yGpv~~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~ 102 (436)
T 2cd8_A 26 QGTTASPPVLDLGALGQDFAADPYPTYARL-RAEGPAHRVRTPEGDEVWLVVGYDRARAVLADP--RFSKDWRNSTTPLT 102 (436)
T ss_dssp --------CCBHHHHHHHHHHCCHHHHHHH-HTTCSEEEEECSSCCEEEEECSHHHHHHHHHCT--TEECCGGGCSSCCC
T ss_pred cCCCCCCccccCCCCCcccccChHHHHHHH-HHhCCeeeeccCCCCeEEEEcCHHHHHHHHcCC--CCcccccccccccc
Confidence 5799999999999986 4455678899999 99999999997 788899999999999999876 57766532111110
Q ss_pred ---ccCCCceeeCCCCchHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHhccCCCCcchHHhH-HHHHHHHHHH
Q 045796 127 ---TLGGNDIVFSPYGAQWRRLRKAMVGEMMTNSSLDSCSALRKQVLKNTIRDLYNNKIGKPVDIGELS-VSTSVNALEN 202 (378)
Q Consensus 127 ---~~~~~~~~~~~~g~~w~~~Rk~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~d~~~~~-~~~t~dii~~ 202 (378)
...+.++ +..+|+.|+++||++. ++|++++++.+.+.++++++++++.|.+. .++++|+..++ ..+++|+|+.
T Consensus 103 ~~~~~~~~~l-~~~dg~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~~-~~~~vd~~~~~~~~~~~~vi~~ 179 (436)
T 2cd8_A 103 EAEAALNHNM-LESDPPRHTRLRKLVA-REFTMRRVELLRPRVQEIVDGLVDAMLAA-PDGRADLMESLAWPLPITVISE 179 (436)
T ss_dssp TTGGGTCCSG-GGCCTTHHHHHHHHHG-GGSSHHHHHTTHHHHHHHHHHHHHHHHTC-TTSCEEHHHHTTTHHHHHHHHH
T ss_pred cccccccccc-cccCchHHHHHHHHhH-HhhCHHHHHHHHHHHHHHHHHHHHHHHhc-cCCCcchHHHHHHHHHHHHHHH
Confidence 1123444 4567999999999985 89999999999999999999999999742 25689999876 5899999998
Q ss_pred HHhcCCCCCCCCcchhHHHHHHHHHHHHHhCCCCcccccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhCC
Q 045796 203 MLWGGGTGSGAHKDHTLEMKQLLDDIMELQGVPNISDIFPVLSRFDLQGVERKCKEIALWVEKIFNSAIEKRKNLIAKGT 282 (378)
Q Consensus 203 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~ 282 (378)
+||.+. . ...++.+.+..++. . . + . ++.......+.+++.++|+++++.
T Consensus 180 -~~G~~~-~-----~~~~~~~~~~~~~~---~---~---~-------~---~~~~~~~~~~~~~~~~~i~~r~~~----- 228 (436)
T 2cd8_A 180 -LLGVPE-P-----DRAAFRVWTDAFVF---P---D---D-------P---AQAQTAMAEMSGYLSRLIDSKRGQ----- 228 (436)
T ss_dssp -HHTCCG-G-----GHHHHHHHHHHHHS---C---S---S-------T---THHHHHHHHHHHHHHHHHHHHTTS-----
T ss_pred -HhCCCH-H-----HHHHHHHHHHHHhc---c---C---C-------H---HHHHHHHHHHHHHHHHHHHHHhcC-----
Confidence 799775 2 12344444443321 0 0 0 0 233445566778888888776531
Q ss_pred CCCCCCCCcHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcCchHHHHHHHHHH
Q 045796 283 LKFDGRNKDFLQTFIEMLDSEDSSISLNRTELIALLLDIILGGTDTTTTIMEWTLTKLLQFPVEMKKVQAELA 355 (378)
Q Consensus 283 ~~~~~~~~dll~~ll~~~~~~~~~~~l~~~ei~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~iq~kl~~Ei~ 355 (378)
...|+++.|++..++ ++..++++||++++.++++||+|||+++|+|++++|++||++|+||++|++
T Consensus 229 -----~~~d~l~~ll~~~~~--~~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~e~~ 294 (436)
T 2cd8_A 229 -----DGEDLLSALVRTSDE--DGSRLTSEELLGMAHILLVAGHETTVNLIANGMYALLSHPDQLAALRADMT 294 (436)
T ss_dssp -----CCCSHHHHHHHHHHH--CTTTSCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCHHHHHHHHHCGG
T ss_pred -----CCCCHHHHHHHhhhc--cCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHhhChh
Confidence 236999999986542 145799999999999999999999999999999999999999999999964
No 27
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A*
Probab=100.00 E-value=1.2e-33 Score=269.25 Aligned_cols=261 Identities=12% Similarity=0.128 Sum_probs=192.7
Q ss_pred CCCCCCCCcccccccCCCCchHHHHHHHHHHhCCceEEecC-CccEEEeCCHHHHHHHHHhCC-CccCCCCCcccccc--
Q 045796 50 LPPGPRGLPLVGYLPFLGTDLYKSLTKLADAYGPIYKFWLA-NKLFVVVSSSSIAKEMVRDKD-TIFSNRQTTVATLT-- 125 (378)
Q Consensus 50 ~~PgP~~~p~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g-~~~~v~v~dpe~i~~vl~~~~-~~f~~r~~~~~~~~-- 125 (378)
.||||+++|++|+++. +++..+.+|. +||||++++++ +.+.++|++++.++++|.++. ..+..++.......
T Consensus 2 ~pPGp~~~P~~g~~~~---~p~~~~~~l~-~~Gpv~~~~~~~g~~~~vv~~~~~v~~vl~~~~~~~~~~r~~~~~~~~~~ 77 (404)
T 1jfb_A 2 MASGAPSFPFSRASGP---EPPAEFAKLR-ATNPVSQVKLFDGSLAWLVTKHKDVCFVATSEKLSKVRTRQGFPELSASG 77 (404)
T ss_dssp ----CCBSSCCCSSTT---SCCTHHHHHH-HHCSEEEEECTTSCEEEEECSHHHHHHHHHCTTEECCTTSTTCCCCSHHH
T ss_pred CCCCCCCCCCCCCcCC---CccHHHHHHH-HhCCeeeeecCCCCceEEEecHHHHHHHHcCCcccccccccCCccccccc
Confidence 5899999999999875 6677888885 69999999863 556777999999999998763 23444443221110
Q ss_pred --cccCCCceeeCCCCchHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHhcc-CCCCcchHHhHHHHHHHHHHH
Q 045796 126 --PTLGGNDIVFSPYGAQWRRLRKAMVGEMMTNSSLDSCSALRKQVLKNTIRDLYNNK-IGKPVDIGELSVSTSVNALEN 202 (378)
Q Consensus 126 --~~~~~~~~~~~~~g~~w~~~Rk~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~-~~~~~d~~~~~~~~t~dii~~ 202 (378)
...++.+ ++..+|+.|+++||++. ++|++++++.+.+.++++++++++.|.+.. +++++|+...+...+.++++.
T Consensus 78 ~~~~~~~~~-l~~~~g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~d~~~~~~~~~~~~i~~ 155 (404)
T 1jfb_A 78 KQAAKAKPT-FVDMDPPEHMHQRSMVE-PTFTPEAVKNLQPYIQRTVDDLLEQMKQKGCANGPVDLVKEFALPVPSYIIY 155 (404)
T ss_dssp HHHTTSCCC-GGGCCTTHHHHHHTTTG-GGGSHHHHHHHHHHHHHHHHHHHHHHHHHCSTTSCEEHHHHTTTHHHHHHHH
T ss_pred cchhcccCc-ccccCchhHHHHHHHhh-hhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHHHHH
Confidence 0112233 44557999999999985 899999999999999999999999998642 346799999999999999999
Q ss_pred HHhcCCCCCCCCcchhHHHHHHHHHHHHHhCCCCcccccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhCC
Q 045796 203 MLWGGGTGSGAHKDHTLEMKQLLDDIMELQGVPNISDIFPVLSRFDLQGVERKCKEIALWVEKIFNSAIEKRKNLIAKGT 282 (378)
Q Consensus 203 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~ 282 (378)
.+||.+.+ . .++.......+. .+ .+ ..++..+....+.+++.++|+++++.
T Consensus 156 ~~~G~~~~-~------~~~~~~~~~~~~-----------~~---~~---~~~~~~~~~~~~~~~~~~~i~~r~~~----- 206 (404)
T 1jfb_A 156 TLLGVPFN-D------LEYLTQQNAIRT-----------NG---SS---TAREASAANQELLDYLAILVEQRLVE----- 206 (404)
T ss_dssp HHHTCCGG-G------HHHHHHHHHHHH-----------CT---TS---CHHHHHHHHHHHHHHHHHHHHHHHHS-----
T ss_pred HHcCCCHH-H------HHHHHHHHHHHh-----------cc---Cc---chHHHHHHHHHHHHHHHHHHHHHHhC-----
Confidence 99998762 1 122222221111 00 11 12344556667888888888887652
Q ss_pred CCCCCCCCcHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcCchHHHHHHHH
Q 045796 283 LKFDGRNKDFLQTFIEMLDSEDSSISLNRTELIALLLDIILGGTDTTTTIMEWTLTKLLQFPVEMKKVQAE 353 (378)
Q Consensus 283 ~~~~~~~~dll~~ll~~~~~~~~~~~l~~~ei~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~iq~kl~~E 353 (378)
..+|+++.|++...+ +..++++||++++.++++||+|||+++|+|++++|++||++|+|||+|
T Consensus 207 -----~~~d~l~~ll~~~~~---~~~l~~~ei~~~~~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~~ 269 (404)
T 1jfb_A 207 -----PKDDIISKLCTEQVK---PGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLKAN 269 (404)
T ss_dssp -----CCSSHHHHHHHHTTT---TTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHC
T ss_pred -----CCCcHHHHHHHhhcc---CCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHhC
Confidence 137999999975432 346999999999999999999999999999999999999999999984
No 28
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A*
Probab=100.00 E-value=1.4e-33 Score=269.81 Aligned_cols=261 Identities=12% Similarity=0.099 Sum_probs=195.6
Q ss_pred CcccccccCCCCchHHHHHHHHHHhC-CceEEecCCccEEEeCCHHHHHHHHHhCCCccCCCCCcc--cccccccCCCce
Q 045796 57 LPLVGYLPFLGTDLYKSLTKLADAYG-PIYKFWLANKLFVVVSSSSIAKEMVRDKDTIFSNRQTTV--ATLTPTLGGNDI 133 (378)
Q Consensus 57 ~p~lG~~~~l~~~~~~~~~~~~~~yG-~i~~~~~g~~~~v~v~dpe~i~~vl~~~~~~f~~r~~~~--~~~~~~~~~~~~ 133 (378)
.|++||...+..+++..+.+++++|| ||+++++++.++++++||++++.++ +. ..|+.++... ..... . |.+.
T Consensus 8 ~P~lG~~~~~~~~p~~~~~~l~~~yg~pv~~~~~~g~~~v~v~~~~~~~~l~-~~-~~~~~~~~~~~~~~~~~-~-g~~~ 83 (417)
T 1izo_A 8 DKSLDNSLTLLKEGYLFIKNRTERYNSDLFQARLLGKNFICMTGAEAAKVFY-DT-DRFQRQNALPKRVQKSL-F-GVNA 83 (417)
T ss_dssp CCCTTHHHHHHHHGGGHHHHHHHHTTSSEEEEEETTEEEEEECSHHHHHHHT-CT-TTEECTTCSCHHHHTTT-T-CTTC
T ss_pred CCccchHHHHhhCcHHHHHHHHHHhCCCeEEeecCCccEEEECCHHHHHHHh-cc-cccccccccccchhhhh-c-cccc
Confidence 38999998886678889999999998 8999998888999999999998554 32 3455433221 11111 1 2233
Q ss_pred eeCCCCchHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHhccCCCCcchHHhHHHHHHHHHHHHHhcCCCCCCC
Q 045796 134 VFSPYGAQWRRLRKAMVGEMMTNSSLDSCSALRKQVLKNTIRDLYNNKIGKPVDIGELSVSTSVNALENMLWGGGTGSGA 213 (378)
Q Consensus 134 ~~~~~g~~w~~~Rk~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~d~~~~~~~~t~dii~~~~fG~~~~~~~ 213 (378)
+++.+|+.|+++|+++. ++|+++.++.+.+.+++.++++++.|.. ++++|+.+++..+++|+++++ ||.+.+ ..
T Consensus 84 l~~~dg~~h~~~R~~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~---~~~~dl~~~~~~~~~~vi~~~-~G~~~~-~~ 157 (417)
T 1izo_A 84 IQGMDGSAHIHRKMLFL-SLMTPPHQKRLAELMTEEWKAAVTRWEK---ADEVVLFEEAKEILCRVACYW-AGVPLK-ET 157 (417)
T ss_dssp GGGCCHHHHHHHHHHHH-HTSSHHHHHHHHHHHHHHHHHHHHHHTT---SSEEEHHHHHHHHHHHHHHHH-HTCCCC-TT
T ss_pred eeecCChHHHHHHHHhh-hhcCHHHHHHHHHHHHHHHHHHHHHHhc---CCCeeHHHHHHHHHHHHHHHH-cCCCCC-ch
Confidence 45667999999999985 8999999999999999999999999974 568999999999999999998 698873 22
Q ss_pred CcchhHHHHHHHHHHHHHhCCCCcccccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCCCCCCCCcHH
Q 045796 214 HKDHTLEMKQLLDDIMELQGVPNISDIFPVLSRFDLQGVERKCKEIALWVEKIFNSAIEKRKNLIAKGTLKFDGRNKDFL 293 (378)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~~~~~dll 293 (378)
+..++.+.+..++..... ..| ...+..+..+.+.+++.++|+++++.. . .....|++
T Consensus 158 ---~~~~~~~~~~~~~~~~~~-----~~~---------~~~~~~~~~~~~~~~~~~~i~~r~~~~-----~-~~~~~d~l 214 (417)
T 1izo_A 158 ---EVKERADDFIDMVDAFGA-----VGP---------RHWKGRRARPRAEEWIEVMIEDARAGL-----L-KTTSGTAL 214 (417)
T ss_dssp ---THHHHHHHHHHHHHHTTC-----CSH---------HHHHHHHHHHHHHHHHHHHHHHHHTTS-----S-CCCTTSHH
T ss_pred ---HHHHHHHHHHHHHhhccc-----CCc---------cchhHHHHHHHHHHHHHHHHHHHHhhc-----c-CCCcCCHH
Confidence 234444444444332110 011 123344566778888999998887642 1 22357999
Q ss_pred HHHHhccccCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcCchHHHHHHHH
Q 045796 294 QTFIEMLDSEDSSISLNRTELIALLLDIILGGTDTTTTIMEWTLTKLLQFPVEMKKVQAE 353 (378)
Q Consensus 294 ~~ll~~~~~~~~~~~l~~~ei~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~iq~kl~~E 353 (378)
+.|++..++ ++..++++++.+++..++ ||+|||+++|+|++++|++||++|+||++|
T Consensus 215 ~~ll~~~~~--~g~~l~~~~~~~~~~~~~-ag~~tt~~~l~~~l~~L~~~P~~~~~l~~E 271 (417)
T 1izo_A 215 HEMAFHTQE--DGSQLDSRMAAIELINVL-RPIVAISYFLVFSALALHEHPKYKEWLRSG 271 (417)
T ss_dssp HHHHHCBCT--TSCBCCHHHHHHHHHHHH-HHHHTHHHHHHHHHHHHHHSTHHHHHHHTC
T ss_pred HHHHHhccc--cCCCCCHHHHHHHHHHHH-hhhhHHHHHHHHHHHHHhhCHHHHHHHHhc
Confidence 999987543 245688888888877765 999999999999999999999999999997
No 29
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A {Pseudomonas SP} SCOP: a.104.1.1
Probab=100.00 E-value=1.2e-33 Score=271.32 Aligned_cols=275 Identities=12% Similarity=0.118 Sum_probs=197.7
Q ss_pred CCCCCCCCCCCcccccccCCC-----CchHHHHHHHHHHhCCceEEec-CCccEEEeCCHHHHHHHHHhCCCccCCCCC-
Q 045796 47 APPLPPGPRGLPLVGYLPFLG-----TDLYKSLTKLADAYGPIYKFWL-ANKLFVVVSSSSIAKEMVRDKDTIFSNRQT- 119 (378)
Q Consensus 47 ~~~~~PgP~~~p~lG~~~~l~-----~~~~~~~~~~~~~yG~i~~~~~-g~~~~v~v~dpe~i~~vl~~~~~~f~~r~~- 119 (378)
+.++||| ++|++.... .+++..+.+|++ ||||+++++ |+.+.++|++|+.++++|.+. ..|++++.
T Consensus 4 ~~~~pp~-----~~g~l~~~~~~~~~~~p~~~~~~l~~-~gpv~~~~~~g~~~~vvv~~~~~v~~vl~~~-~~fs~r~~~ 76 (428)
T 1cpt_A 4 RATIPEH-----IARTVILPQGYADDEVIYPAFKWLRD-EQPLAMAHIEGYDPMWIATKHADVMQIGKQP-GLFSNAEGS 76 (428)
T ss_dssp TCCSCHH-----HHHHHHSSGGGGCHHHHHHHHHHHHH-HCSEEEECCTTSCCEEEECSHHHHHHHHHCT-TTEESSSSC
T ss_pred ccccchh-----hhcccCChhhhcccCCccHHHHHHHH-hCCeeeccccCCCCeEEEccHHHHHHHHcCc-hhccCcccc
Confidence 3468888 889865542 457888888876 899999997 688999999999999999754 46887764
Q ss_pred cccc---c-c-c---cc---C-CCceeeCCCCchHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHhccCCCCcc
Q 045796 120 TVAT---L-T-P---TL---G-GNDIVFSPYGAQWRRLRKAMVGEMMTNSSLDSCSALRKQVLKNTIRDLYNNKIGKPVD 187 (378)
Q Consensus 120 ~~~~---~-~-~---~~---~-~~~~~~~~~g~~w~~~Rk~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~d 187 (378)
.... . . + .. . +.+ ++..+|+.|+++||++. ++|++++++.+.+.++++++++++.|.+ .++++|
T Consensus 77 ~~~~~~~~~~~~~~~~g~~~~~~~~-l~~~~g~~~~~~Rr~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~--~~~~~d 152 (428)
T 1cpt_A 77 EILYDQNNEAFMRSISGGCPHVIDS-LTSMDPPTHTAYRGLTL-NWFQPASIRKLEENIRRIAQASVQRLLD--FDGECD 152 (428)
T ss_dssp SSCCCHHHHHHHHHHTTTSSCSSCC-GGGCCTTHHHHHHHHHH-TTSSHHHHGGGHHHHHHHHHHHHHHHHT--SSSEEE
T ss_pred ccCCcccccchhccccccccccccc-cccCChHHHHHHHHHhh-hhhCHHHHHHHHHHHHHHHHHHHHHHHH--hCCCee
Confidence 2211 1 1 1 11 0 123 44557999999999985 8999999999999999999999999985 236799
Q ss_pred hHHh-HHHHHHHHHHHHHhcCCCCCCCCcchhHHHHHHHHHHHHHhCCCCcccccccccccCccchHHHHHHHHHHHHHH
Q 045796 188 IGEL-SVSTSVNALENMLWGGGTGSGAHKDHTLEMKQLLDDIMELQGVPNISDIFPVLSRFDLQGVERKCKEIALWVEKI 266 (378)
Q Consensus 188 ~~~~-~~~~t~dii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~ 266 (378)
+... ...+++|+|+++ ||.+.+ ...++.+....++..... ....+|++.++. ....++..+..+.+.++
T Consensus 153 ~~~~~~~~~~~~vi~~~-fG~~~~------~~~~~~~~~~~~~~~~~~--~~~~~P~l~~~~-~~~~~~~~~~~~~~~~~ 222 (428)
T 1cpt_A 153 FMTDCALYYPLHVVMTA-LGVPED------DEPLMLKLTQDFFGVHEP--DEQAVAAPRQSA-DEAARRFHETIATFYDY 222 (428)
T ss_dssp HHHHTTTTHHHHHHHHH-HTCCGG------GHHHHHHHHHTTTCC-------------------CHHHHHHHHHHHHHHH
T ss_pred hHHHHHhhhHHHHHHHH-cCCCHh------HHHHHHHHHHHHHhcccc--cccccccccccc-hhhHHHHHHHHHHHHHH
Confidence 9754 567999999999 998762 123344433322211000 112344443321 12234556666778888
Q ss_pred HHHHHHHHHHhhhhCCCCCCCCCCcHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcCchH
Q 045796 267 FNSAIEKRKNLIAKGTLKFDGRNKDFLQTFIEMLDSEDSSISLNRTELIALLLDIILGGTDTTTTIMEWTLTKLLQFPVE 346 (378)
Q Consensus 267 ~~~~i~~r~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~ei~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~i 346 (378)
+.++|+++++. ...|+++.|++...+ +..++++||++++.++++||+|||+++|+|++++|++||++
T Consensus 223 ~~~~i~~r~~~----------~~~dll~~ll~~~~~---~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~ 289 (428)
T 1cpt_A 223 FNGFTVDRRSC----------PKDDVMSLLANSKLD---GNYIDDKYINAYYVAIATAGHDTTSSSSGGAIIGLSRNPEQ 289 (428)
T ss_dssp HHHHHHHHTTS----------CCSSHHHHHHHCBSS---SSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
T ss_pred HHHHHHHHHcC----------CCCcHHHHHHhcccc---CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHH
Confidence 88888776531 236999999987532 45699999999999999999999999999999999999999
Q ss_pred HHHHHHHHH
Q 045796 347 MKKVQAELA 355 (378)
Q Consensus 347 q~kl~~Ei~ 355 (378)
|+|+++|++
T Consensus 290 ~~~l~~E~~ 298 (428)
T 1cpt_A 290 LALAKSDPA 298 (428)
T ss_dssp HHHHHHCGG
T ss_pred HHHHHHhHH
Confidence 999999974
No 30
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A*
Probab=100.00 E-value=4.8e-35 Score=284.37 Aligned_cols=294 Identities=15% Similarity=0.134 Sum_probs=185.4
Q ss_pred CCCCCCCCCC-CcccccccCCCCchHHHHHHHHHHhCCceEEecCCccEEEeCCHHHHHHHHHhCCCccCCCCCcc-ccc
Q 045796 47 APPLPPGPRG-LPLVGYLPFLGTDLYKSLTKLADAYGPIYKFWLANKLFVVVSSSSIAKEMVRDKDTIFSNRQTTV-ATL 124 (378)
Q Consensus 47 ~~~~~PgP~~-~p~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~v~dpe~i~~vl~~~~~~f~~r~~~~-~~~ 124 (378)
..+.||||++ +|++||++.+..+++..+.+|+++||||+++++|+.++++++||+++++++.++.. |+.++... ...
T Consensus 16 ~~~~pPgp~~~~P~iG~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~~~~il~~~~~-~~~~~~~~~~~~ 94 (475)
T 3b98_A 16 RRNEPPLDKGMIPWLGHALEFGKDAAKFLTRMKEKHGDIFTVRAAGLYITVLLDSNCYDAVLSDVAS-LDQTSYAQVLMK 94 (475)
T ss_dssp CTTCCCEECCSSTTTBTHHHHHHCHHHHHHHHHHHHCSEEEEEETTEEEEEECCTTTHHHHHTCTTT-EESHHHHHHHHH
T ss_pred CCCCCCCCCCCcchHHhHHHHhhCHHHHHHHHHHHhCCeEEEEECCceEEEEeCHHHHHHHHcCccc-CCchHHHHHHHH
Confidence 3468999998 89999999886678999999999999999999999999999999999999976542 33222111 111
Q ss_pred ccccCCCceeeCCCCchHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHhcc---CCCCcchHHhHHHHHHHHHH
Q 045796 125 TPTLGGNDIVFSPYGAQWRRLRKAMVGEMMTNSSLDSCSALRKQVLKNTIRDLYNNK---IGKPVDIGELSVSTSVNALE 201 (378)
Q Consensus 125 ~~~~~~~~~~~~~~g~~w~~~Rk~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~---~~~~~d~~~~~~~~t~dii~ 201 (378)
.. .+.+++ ..+|+.| |+++. ++|++++++.+.+.+.+++..+++.+.... ....+++..++..+++++++
T Consensus 95 ~~--~g~~~~-~~~~~~~---R~~~~-~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (475)
T 3b98_A 95 RI--FNMILP-SHNPESE---KKRAE-MHFQGASLTQLSNSMQNNLRLLMTPSEMGLKTSEWKKDGLFNLCYSLLFKTGY 167 (475)
T ss_dssp HT--TCCCCT-TCCHHHH---HHHHH-HHTSHHHHHHHHHHHHHHHHHHSSTTTTTCSSCSCEEEEHHHHHHHHHHHHHH
T ss_pred HH--hCCCCC-CCChHHH---HHHHH-HHcChhhHHHHHHHHHHHHHHHHhhcccccCCCCceeehHHHHHHHHHHHHhh
Confidence 11 123433 3456665 45554 689999999999999998888887654321 01135566666666666666
Q ss_pred HHHhcCCCCCCCCcchhHHHHHHHHHHHHHhCCCCcccccccccccCcc-chHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 045796 202 NMLWGGGTGSGAHKDHTLEMKQLLDDIMELQGVPNISDIFPVLSRFDLQ-GVERKCKEIALWVEKIFNSAIEKRKNLIAK 280 (378)
Q Consensus 202 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~ 280 (378)
...||.+. .. ...+.+..+.+... .+.+|++.+.... ...++..+..+ .+.+.+.+ ..
T Consensus 168 ~~~~g~~~---~~---~~~~~~~~~~~~~~------~~~~p~l~~~~~~~~~~~~~~~~~~----~~~~~~~~---~~-- 226 (475)
T 3b98_A 168 LTVFGAEN---NN---SAALTQIYEEFRRF------DKLLPKLARTTVNKEEKQIASAARE----KLWKWLTP---SG-- 226 (475)
T ss_dssp HHHHCCTT---SC---HHHHHHHHHHHHHH------HHHHHHHHTTCCCHHHHHHHHHHHH----HHHHHHSC---TT--
T ss_pred hheeCCcc---cc---chhcHHHHHHHHHH------HhhhHHHHHHhcChhhhHHHHHHHH----HHHHHHHH---HH--
Confidence 66666332 11 12222222222211 1234543221111 11122222222 12222211 11
Q ss_pred CCCCCCCCCCcHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcCchHHHHHHHHHHHhhCC
Q 045796 281 GTLKFDGRNKDFLQTFIEMLDSEDSSISLNRTELIALLLDIILGGTDTTTTIMEWTLTKLLQFPVEMKKVQAELAEVVGL 360 (378)
Q Consensus 281 ~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~ei~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~iq~kl~~Ei~~~~~~ 360 (378)
. .......|+++.|++...+ +..++++++. +++++++||+|||+++|+|++++|++||++|+|||+||+ .+
T Consensus 227 ~--~~~~~~~d~l~~ll~~~~~---~~~~~~~~i~-~~~~~l~ag~~TTa~~l~~~l~~L~~~P~~~~~l~~Ei~--~~- 297 (475)
T 3b98_A 227 L--DRKPREQSWLGSYVKQLQD---EGIDAEMQRR-AMLLQLWVTQGNAGPAAFWVMGYLLTHPEALRAVREEIQ--GG- 297 (475)
T ss_dssp S--CCCCCTTSHHHHHHHHHHH---TTCCHHHHHH-HHHHHHHHHHSSHHHHHHHHHHHHHTCHHHHHHHHHHHC-----
T ss_pred h--hccccccHHHHHHHHHHHH---cCCCHHHHHH-HHHHHHHHccccHHHHHHHHHHHHHcCHHHHHHHHHHHh--cC-
Confidence 0 1123457999999976543 2357888888 999999999999999999999999999999999999998 23
Q ss_pred CCCcccCCCCCCcCccCC
Q 045796 361 NNNVEESHLPKLKCLDAT 378 (378)
Q Consensus 361 ~~~~~~~~l~~LpYL~av 378 (378)
++.++++++++||||+||
T Consensus 298 ~~~~~~~~~~~lpyl~a~ 315 (475)
T 3b98_A 298 KHLRLEERQKNTPVFDSV 315 (475)
T ss_dssp ----------CCHHHHHH
T ss_pred CCCCCHHHHhcCHHHHHH
Confidence 345699999999999985
No 31
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A {Amycolatopsis orientalis} SCOP: a.104.1.1
Probab=100.00 E-value=2.8e-33 Score=266.76 Aligned_cols=256 Identities=15% Similarity=0.185 Sum_probs=194.5
Q ss_pred CCCCCCCCCCcccccccCCCCchHHHHHHHHHHhCCceEEe----c-CC-ccEEEeCCHHHHHHHH-HhCCCccCCCCCc
Q 045796 48 PPLPPGPRGLPLVGYLPFLGTDLYKSLTKLADAYGPIYKFW----L-AN-KLFVVVSSSSIAKEMV-RDKDTIFSNRQTT 120 (378)
Q Consensus 48 ~~~~PgP~~~p~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~----~-g~-~~~v~v~dpe~i~~vl-~~~~~~f~~r~~~ 120 (378)
.++||||+++|+. +..+++..+.+| ++||||++++ + |+ .+.|+++||+.+++|| .++ .|++++..
T Consensus 9 ~~lppgp~~~p~~-----~~~~p~~~~~~l-~~yGpv~~~~~~~~~~~~~~~~vvv~~~~~i~~vl~~~~--~~~~~~~~ 80 (406)
T 1ued_A 9 APLLREPANFQLR-----TNCDPHEDNFGL-RAHGPLVRIVGESSTQLGRDFVWQAHGYEVVRRILGDHE--HFTTRPQF 80 (406)
T ss_dssp CCEEECCTTTTCE-----ETTEECHHHHHH-HTTCSEEEEESHHHHHTTSSCEEEECSHHHHHHHHHCCS--SEECCCCC
T ss_pred CCCcccCcccCCC-----CCCCcHHHHHHH-HHhCCeeeecccccCCCCCccEEEEcCHHHHHHHHhhCc--cccccccc
Confidence 4679999999986 445778899999 9999999999 6 78 8999999999999999 443 35555431
Q ss_pred cccc-ccc---cCCCceeeCCCCchHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHhccCCCCcchHHhHHH-H
Q 045796 121 VATL-TPT---LGGNDIVFSPYGAQWRRLRKAMVGEMMTNSSLDSCSALRKQVLKNTIRDLYNNKIGKPVDIGELSVS-T 195 (378)
Q Consensus 121 ~~~~-~~~---~~~~~~~~~~~g~~w~~~Rk~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~d~~~~~~~-~ 195 (378)
.... ... ..+.+ ++..+|+.|+++||++. ++|+++.++.+.+.++++++++++.|.. .|+++|+.+++.. +
T Consensus 81 ~~~~~~~~~~~~~~~~-l~~~~g~~~~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~--~g~~~d~~~~~~~~~ 156 (406)
T 1ued_A 81 TQSKSGAHVEAQFVGQ-ISTYDPPEHTRLRKMLT-PEFTVRRIRRMEPAIQSLIDDRLDLLEA--EGPSADLQGLFADPV 156 (406)
T ss_dssp ---------CGGGTTC-GGGCCTTHHHHHHHHHG-GGSSHHHHHHHHHHHHHHHHHHHHHHHH--HCTTEEHHHHTHHHH
T ss_pred cccccccccccccccc-cccCCCHHHHHHHHHhh-hhhCHHHHHHHHHHHHHHHHHHHHHHHh--cCCCeeHHHHHHHHh
Confidence 1110 010 01233 44567999999999985 8999999999999999999999999975 3568999988865 9
Q ss_pred HHHHHHHHHhcCCCCCCCCcchhHHHHHHHHHHHHHhCCCCcccccccccccCccchHHHHHHHHHHHHHHHHHHHHHHH
Q 045796 196 SVNALENMLWGGGTGSGAHKDHTLEMKQLLDDIMELQGVPNISDIFPVLSRFDLQGVERKCKEIALWVEKIFNSAIEKRK 275 (378)
Q Consensus 196 t~dii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~ 275 (378)
++|+++. +||.+. . ...++.+.+..++.. .. ..++.....+.+.+++.++|++++
T Consensus 157 ~~~vi~~-~~G~~~-~-----~~~~~~~~~~~~~~~--------------~~----~~~~~~~~~~~~~~~~~~~i~~r~ 211 (406)
T 1ued_A 157 GAHALCE-LLGIPR-D-----DQREFVRRIRRNADL--------------SR----GLKARAADSAAFNRYLDNLLARQR 211 (406)
T ss_dssp HHHHHHH-HHTCCH-H-----HHHHHHHHHHHCC-----------------C----CHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHH-HcCCCH-H-----HHHHHHHHHHHHHhc--------------cC----CHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999994 799765 1 123343333322110 00 013445566778888888888876
Q ss_pred HhhhhCCCCCCCCCCcHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcCchHHHHHHHHHH
Q 045796 276 NLIAKGTLKFDGRNKDFLQTFIEMLDSEDSSISLNRTELIALLLDIILGGTDTTTTIMEWTLTKLLQFPVEMKKVQAELA 355 (378)
Q Consensus 276 ~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~ei~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~iq~kl~~Ei~ 355 (378)
+. . ..|+++.|++.. +..+++++|++++.++++||+|||+++|+|++++|++||++|+|+|+|++
T Consensus 212 ~~--------~--~~d~l~~ll~~~-----~~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~~ 276 (406)
T 1ued_A 212 AD--------P--DDGLLGMIVRDH-----GDNVTDEELKGLCTALILGGVETVAGMIGFGVLALLDNPGQIELLFESPE 276 (406)
T ss_dssp HS--------C--CSSHHHHHHHHH-----GGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSGGGTTHHHHCHH
T ss_pred hC--------C--CCCHHHHHHHhc-----CCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhChHHHHHHHhCHH
Confidence 52 1 379999999864 23589999999999999999999999999999999999999999999974
No 32
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A*
Probab=100.00 E-value=6e-33 Score=265.25 Aligned_cols=264 Identities=11% Similarity=0.018 Sum_probs=194.2
Q ss_pred CCCCCCCcccccccCCCCchHHHHHHHHHHh-CCceEEecCCccEEEeCCHHHHHHHHHhCCCccCCCCCcc--cccccc
Q 045796 51 PPGPRGLPLVGYLPFLGTDLYKSLTKLADAY-GPIYKFWLANKLFVVVSSSSIAKEMVRDKDTIFSNRQTTV--ATLTPT 127 (378)
Q Consensus 51 ~PgP~~~p~lG~~~~l~~~~~~~~~~~~~~y-G~i~~~~~g~~~~v~v~dpe~i~~vl~~~~~~f~~r~~~~--~~~~~~ 127 (378)
|||| |++||...+..+++..+.+++++| |||+++.+++.+++++++|+.++ ++.+. ..|++++... .....
T Consensus 4 pPg~---P~iG~~~~~~~~p~~~~~~l~~~y~gpv~~~~~~g~~~~vv~~~~~~~-~l~~~-~~f~~~~~~~~~~~~~~- 77 (415)
T 3awm_A 4 TPHT---KGPDETLSLLADPYRFISRQCQRLGANAFESRFLLKKTNCLKGAKAAE-IFYDT-TRFEREGAMPVAIQKTL- 77 (415)
T ss_dssp --------CCCCHHHHHHSTTTHHHHHHHHHTSSEEEEEETTEEEEEEESHHHHH-HHTCT-TTEECTTCSCHHHHTTT-
T ss_pred CCCC---CccchHHHHHhChHHHHHHHHHHhCCCeEEEecCCCcEEEEeCHHHHH-HHhcc-cccccccccchhhhhhc-
Confidence 6676 899999887667788999999999 79999998888999999999986 66544 3566543221 11111
Q ss_pred cCCCceeeCCCCchHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHhccCCCCcchHHhHHHHHHHHHHHHHhcC
Q 045796 128 LGGNDIVFSPYGAQWRRLRKAMVGEMMTNSSLDSCSALRKQVLKNTIRDLYNNKIGKPVDIGELSVSTSVNALENMLWGG 207 (378)
Q Consensus 128 ~~~~~~~~~~~g~~w~~~Rk~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~d~~~~~~~~t~dii~~~~fG~ 207 (378)
. +.+.++..+|+.|+++||++. ++|+++.++.+.+.+++.++++++.|.. ++++|+.+++..+++++++++ ||.
T Consensus 78 ~-g~~~l~~~dg~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~~~~---~~~vdl~~~~~~~~~~vi~~~-~G~ 151 (415)
T 3awm_A 78 L-GQGGVQGLDGETHRHRKQMFM-GLMTPERVRALAQLFEAEWRRAVPGWTR---KGEIVFYDELHEPLTRAVCAW-AGV 151 (415)
T ss_dssp S-CSSSGGGCCHHHHHHHHHHHH-TTCCHHHHHHHHHHHHHHHHHHHHHHHH---HSEEEHHHHHHHHHHHHHHHH-HTC
T ss_pred c-CCcceeecCcHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHHHHhhcc---CCcEeHHHHHHHHHHHHHHHH-cCC
Confidence 1 222345567999999999985 8999999999999999999999999975 457999999999999999998 898
Q ss_pred CCCCCCCcchhHHHHHHHHHHHHHhCCCCcccccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCCCCC
Q 045796 208 GTGSGAHKDHTLEMKQLLDDIMELQGVPNISDIFPVLSRFDLQGVERKCKEIALWVEKIFNSAIEKRKNLIAKGTLKFDG 287 (378)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~~ 287 (378)
+.+ .. +..++.+.+..++.... . + ....++.....+.+.+++.++|+++++.. . ..
T Consensus 152 ~~~-~~---~~~~~~~~~~~~~~~~~---------~---~--~~~~~~~~~~~~~~~~~~~~~i~~r~~~~--~----~~ 207 (415)
T 3awm_A 152 PLP-DD---EAGNRAGELRALFDAAG---------S---A--SPRHLWSRLARRRVDAWAKRIIEGIRAGS--I----GS 207 (415)
T ss_dssp CCC-GG---GHHHHHHHHHHHHHSTT---------C---S--SHHHHHHHHHHHHHHHHHHHHHHHHHHTS--S----CC
T ss_pred CCC-cc---hHHHHHHHHHHHHHHhc---------c---c--CchHHHHHHHHHHHHHHHHHHHHHHHHhh--h----cC
Confidence 772 21 22334333333332110 0 0 01123445566778888999998887642 1 22
Q ss_pred CCCcHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcCchHHHHHHHH
Q 045796 288 RNKDFLQTFIEMLDSEDSSISLNRTELIALLLDIILGGTDTTTTIMEWTLTKLLQFPVEMKKVQAE 353 (378)
Q Consensus 288 ~~~dll~~ll~~~~~~~~~~~l~~~ei~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~iq~kl~~E 353 (378)
...|+++.|++..++ ++..++++++.+++..++ ||+|||+++|+|++++|++||++|+|+++|
T Consensus 208 ~~~d~l~~ll~~~~~--~g~~~~~~~~~~~~~~~~-ag~~tt~~~l~~~l~~L~~~P~~~~~l~~e 270 (415)
T 3awm_A 208 GSGTAAYAIAWHRDR--HDDLLSPHVAAVELVNVL-RPTVAIAVYITFVAHALQTCSGIRAALVQQ 270 (415)
T ss_dssp CTTSHHHHHHHCBCT--TSCBCCHHHHHHHHHHHH-HHHHTHHHHHHHHHHHHHHSTTHHHHHHHC
T ss_pred CCCCHHHHHHhhhhc--cCCCCCHHHHHHHHHHHH-HhhhhHHHHHHHHHHHHHhChHHHHHHHHH
Confidence 357999999987543 245689999988887765 999999999999999999999999999987
No 33
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A*
Probab=100.00 E-value=1.3e-34 Score=282.87 Aligned_cols=292 Identities=12% Similarity=0.140 Sum_probs=200.3
Q ss_pred CCCCCCCCCCCCcccccccCC-----CCchHHHHHHHHHHhCC-ceEEecCCccE-------EEeCCHHHHHHHHHhCC-
Q 045796 46 TAPPLPPGPRGLPLVGYLPFL-----GTDLYKSLTKLADAYGP-IYKFWLANKLF-------VVVSSSSIAKEMVRDKD- 111 (378)
Q Consensus 46 ~~~~~~PgP~~~p~lG~~~~l-----~~~~~~~~~~~~~~yG~-i~~~~~g~~~~-------v~v~dpe~i~~vl~~~~- 111 (378)
.+.+.||||++||++|+++++ ...++.++.+++++||+ ||++++++.++ |+++|++..+.++....
T Consensus 25 ~p~~~pPGp~g~P~iG~~~~~~~~~~~~~~~~f~~~~~~kyG~~Vf~~~l~~~~~vv~~p~~v~~~~~~~~~~l~~~~~v 104 (495)
T 3dsk_A 25 LPIRNIPGNYGLPIVGPIKDRWDYFYDQGAEEFFKSRIRKYNSTVYRVNMPPGAFIAENPQVVALLDGKSFPVLFDVDKV 104 (495)
T ss_dssp CCBCCCCCCCCSTTHHHHHHHHHHHTTSCHHHHHHHHHHHHTCSEEEEECSCCTTTCSCCEEEEECSTTTGGGGGCTTTE
T ss_pred CCCCCCCCCCCCCccchHHHHHHHHHhcCcHHHHHHHHHHhCCceEeecCCCCCCccCCCCEEEEeCCcceeeecccccc
Confidence 455789999999999998765 46789999999999999 99999988888 66677776666554321
Q ss_pred ---CccCC-CCCcccccccccCCCceeeCCCCchHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHhcc-CCCCc
Q 045796 112 ---TIFSN-RQTTVATLTPTLGGNDIVFSPYGAQWRRLRKAMVGEMMTNSSLDSCSALRKQVLKNTIRDLYNNK-IGKPV 186 (378)
Q Consensus 112 ---~~f~~-r~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~-~~~~~ 186 (378)
..|.. .+.. .......+...++..+|+.|+++|+++. +.|++.. +.+.+.+++.++++++.|.... +++++
T Consensus 105 ~k~~~~~~~~~~~--~~l~g~~~~~~~~~~~g~~h~~~R~~~~-~~f~~~~-~~~~~~i~~~~~~ll~~~~~~~~~~~~v 180 (495)
T 3dsk_A 105 EKKDLLTGTYMPS--TELTGGYRILSYLDPSEPKHEKLKNLLF-FLLKSSR-NRIFPEFQATYSELFDSLEKELSLKGKA 180 (495)
T ss_dssp ECSSCTTSSSCCC--GGGGTTCCCGGGCCTTSHHHHHHHHHHH-HHHHHTT-TTHHHHHHHHHHHHHHHHHHHHHHHSSE
T ss_pred cccccccccCCCC--ccccCCCcceeeeCCCchHHHHHHHHHH-HHHHHHH-HHHHHHHHHHHHHHHHHHHHHhccCCCc
Confidence 12211 1211 1222111223445567999999999986 7898755 8999999999999999997532 35689
Q ss_pred chHHhHHHHHHHHHHHHHhcCCCCCCCCcchhHHHHHHHHHHHHHhCCCCccccccccc-ccCccchHHHHHHHHHHHHH
Q 045796 187 DIGELSVSTSVNALENMLWGGGTGSGAHKDHTLEMKQLLDDIMELQGVPNISDIFPVLS-RFDLQGVERKCKEIALWVEK 265 (378)
Q Consensus 187 d~~~~~~~~t~dii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~-~~~~~~~~~~~~~~~~~~~~ 265 (378)
|+.+++.+++++++++++||.+.+ ..+ ....+...++...... ..|++. .++ .
T Consensus 181 dl~~~~~~~~~~~i~~~~~G~~~~-~~~--~~~~~~~~~~~~~~~~-------~~p~~~~~~p--~-------------- 234 (495)
T 3dsk_A 181 DFGGSSDGTAFNFLARAFYGTNPA-DTK--LKADAPGLITKWVLFN-------LHPLLSIGLP--R-------------- 234 (495)
T ss_dssp ESHHHHHHHHHHHHHHHHHSCCGG-GST--TTTCHHHHHHHHHHHH-------HGGGCCCSSC--H--------------
T ss_pred cHHHHHHHHHHHHHHHHHcCCCcc-hhh--hhhhHHHHHHHHHHHh-------hhhHhHhccH--H--------------
Confidence 999999999999999999998873 221 1222333333333211 122211 111 0
Q ss_pred HHHHHHHHHH-----------HhhhhCCCCCCCCCCcHHHHHHhccccCCCCCCCCHHHHHHHHHHHH-hhcccchHHHH
Q 045796 266 IFNSAIEKRK-----------NLIAKGTLKFDGRNKDFLQTFIEMLDSEDSSISLNRTELIALLLDII-LGGTDTTTTIM 333 (378)
Q Consensus 266 ~~~~~i~~r~-----------~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~ei~~~~~~~~-~AG~dTTa~tl 333 (378)
++.+++.+++ +.. .+...+.++.+++..+ +..++++|++++++.++ +||+|||++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~ll~~~~----~~~l~~~ei~~~~~~~l~~ag~~tt~~~l 303 (495)
T 3dsk_A 235 VIEEPLIHTFSLPPALVKSDYQRL-------YEFFLESAGEILVEAD----KLGISREEATHNLLFATCFNTWGGMKILF 303 (495)
T ss_dssp HHHHHHHSSSCCCGGGGHHHHHHH-------HHHHHHHCHHHHHHHH----HTTCCHHHHHHHHHHHHHTTHHHHHHHHH
T ss_pred HHHHHHHHhhcccchhhhhhHHHH-------HHHHHHHHHHHHHHHH----hCCCCHHHHHHHHHHHHHHHhhhhHHHHH
Confidence 0111111110 000 0000122234444332 24689999999777666 99999999999
Q ss_pred HHHHHHHhc-CchHHHHHHHHHHHhhCCC-CCcccCCCCCCcCccCC
Q 045796 334 EWTLTKLLQ-FPVEMKKVQAELAEVVGLN-NNVEESHLPKLKCLDAT 378 (378)
Q Consensus 334 ~~~l~~L~~-~P~iq~kl~~Ei~~~~~~~-~~~~~~~l~~LpYL~av 378 (378)
+|++++|+. ||++|+|||+||+++++++ +.++++++++||||+||
T Consensus 304 ~~~l~~L~~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~~lp~l~a~ 350 (495)
T 3dsk_A 304 PNMVKRIGRAGHQVHNRLAEEIRSVIKSNGGELTMGAIEKMELTKSV 350 (495)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHHHHHHHTTTCCCHHHHHTCHHHHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHhccCCCCCCHHHHhcCHHHHHH
Confidence 999999995 9999999999999998753 67899999999999875
No 34
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.50A {Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A* 3cv9_A*
Probab=100.00 E-value=2.6e-32 Score=260.58 Aligned_cols=261 Identities=12% Similarity=0.160 Sum_probs=196.1
Q ss_pred CCCCCCCCCCcccccccCCCCchHHHHHHHHHHh-CCceEEec-CCccEEEeCCHHHHHHHHHhCCCccCCCCCcccccc
Q 045796 48 PPLPPGPRGLPLVGYLPFLGTDLYKSLTKLADAY-GPIYKFWL-ANKLFVVVSSSSIAKEMVRDKDTIFSNRQTTVATLT 125 (378)
Q Consensus 48 ~~~~PgP~~~p~lG~~~~l~~~~~~~~~~~~~~y-G~i~~~~~-g~~~~v~v~dpe~i~~vl~~~~~~f~~r~~~~~~~~ 125 (378)
...+|||+++|.+..-..+..+++..+.+| ++| |||+++++ |+.+.++|+||+++++||.++. |++++.......
T Consensus 4 ~~~~~~~~~~P~~~~~~~~~~~p~~~~~~l-~~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~ 80 (412)
T 2zbx_A 4 TATTPQTTDAPAFPSNRSCPYQLPDGYAQL-RDTPGPLHRVTLYDGRQAWVVTKHEAARKLLGDPR--LSSNRTDDNFPA 80 (412)
T ss_dssp ----CCCCSSCBSSCCCSSTTSCCHHHHHH-HHSSSSEEEEECTTSCEEEEECSHHHHHHHHTCTT--EECCTTSTTSCC
T ss_pred CCCCCCCCCCCCCCCCchhccChHHHHHHH-HhcCCCeEeeccCCCCcEEEEecHHHHHHHHcCcc--cccCcccccccc
Confidence 356888888886633334556788899999 788 99999997 8889999999999999998653 444432111110
Q ss_pred cc-----c--CCCceeeCCCCchHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHhccCCCCcchHHhHH-HHHH
Q 045796 126 PT-----L--GGNDIVFSPYGAQWRRLRKAMVGEMMTNSSLDSCSALRKQVLKNTIRDLYNNKIGKPVDIGELSV-STSV 197 (378)
Q Consensus 126 ~~-----~--~~~~~~~~~~g~~w~~~Rk~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~d~~~~~~-~~t~ 197 (378)
.. . .+.+ ++..+|+.|+++||++. ++|++++++.+.+.++++++++++.|.. .|+++|+...+. .+++
T Consensus 81 ~~~~~~~~~~~~~~-l~~~~g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~--~g~~~d~~~~~~~~~~~ 156 (412)
T 2zbx_A 81 TSPRFEAVRESPQA-FIGLDPPEHGTRRRMTI-SEFTVKRIKGMRPEVEEVVHGFLDEMLA--AGPTADLVSQFALPVPS 156 (412)
T ss_dssp CSGGGC----CCCC-GGGCCTTHHHHHHTTTG-GGGSHHHHHHHHHHHHHHHHHHHHHHHH--HCSCEEHHHHTTTHHHH
T ss_pred cccccccccccccc-cccCCcHHHHHHHHHhh-hhcCHHHHHHHHHHHHHHHHHHHHHHHh--cCCCccHHHHHHHHHHH
Confidence 00 0 1223 45567999999999985 8999999999999999999999999975 356899998876 5999
Q ss_pred HHHHHHHhcCCCCCCCCcchhHHHHHHHHHHHHHhCCCCcccccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHh
Q 045796 198 NALENMLWGGGTGSGAHKDHTLEMKQLLDDIMELQGVPNISDIFPVLSRFDLQGVERKCKEIALWVEKIFNSAIEKRKNL 277 (378)
Q Consensus 198 dii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~ 277 (378)
|+++. +||.+. . ....+.+.+..++.. . .. ++.....+.+.+++.++|+++++.
T Consensus 157 ~vi~~-~~G~~~-~-----~~~~~~~~~~~~~~~---------~--------~~--~~~~~~~~~~~~~~~~~i~~r~~~ 210 (412)
T 2zbx_A 157 MVICR-LLGVPY-A-----DHEFFQDASKRLVQS---------T--------DA--QSALTARNDLAGYLDGLITQFQTE 210 (412)
T ss_dssp HHHHH-HHTCCG-G-----GHHHHHHHHHHHHHC---------S--------SH--HHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHH-HcCCCH-H-----HHHHHHHHHHHHhcc---------C--------cH--HHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99997 799776 2 123454444443320 0 01 344455667788888888887652
Q ss_pred hhhCCCCCCCCCCcHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcCchHHHHHHHHH
Q 045796 278 IAKGTLKFDGRNKDFLQTFIEMLDSEDSSISLNRTELIALLLDIILGGTDTTTTIMEWTLTKLLQFPVEMKKVQAEL 354 (378)
Q Consensus 278 ~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~ei~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~iq~kl~~Ei 354 (378)
. ..|+++.|++..++ +..+++++|++++.++++||+|||+++|+|++++|++||++|+|+|+|+
T Consensus 211 --------~--~~d~l~~ll~~~~~---~~~ls~~ei~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~ 274 (412)
T 2zbx_A 211 --------P--GAGLVGALVADQLA---NGEIDREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALRADR 274 (412)
T ss_dssp --------C--CSSHHHHHHHTTTT---TTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCG
T ss_pred --------C--CCCHHHHHHHhccc---CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHhCh
Confidence 1 37999999987532 4579999999999999999999999999999999999999999999986
No 35
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A*
Probab=100.00 E-value=7.2e-34 Score=269.39 Aligned_cols=252 Identities=14% Similarity=0.151 Sum_probs=185.3
Q ss_pred CCCCCCcccccccCCCCchHHHHHHHHHHhCCceEEecCCccEEEeCCHHHHHHHHHhCCCccCCCC-CcccccccccCC
Q 045796 52 PGPRGLPLVGYLPFLGTDLYKSLTKLADAYGPIYKFWLANKLFVVVSSSSIAKEMVRDKDTIFSNRQ-TTVATLTPTLGG 130 (378)
Q Consensus 52 PgP~~~p~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~v~dpe~i~~vl~~~~~~f~~r~-~~~~~~~~~~~~ 130 (378)
|++..+|++||++.+..+++..+.+|+++||||++ ++|+.+.++++||+++++|+.++ .|++++ ........ . +
T Consensus 2 ~~~~~~p~iGnl~~~~~~p~~~~~~l~~~yGpv~~-~~g~~~~vvv~~~~~i~~il~~~--~f~~~~~~~~~~~~~-~-g 76 (389)
T 1n97_A 2 KRLSLREAWPYLKDLQQDPLAVLLAWGRAHPRLFL-PLPRFPLALIFDPEGVEGALLAE--GTTKATFQYRALSRL-T-G 76 (389)
T ss_dssp EECCHHHHHHHHHHHHHCHHHHHHHHHHHCSEEEE-CCTTCCEEEECSHHHHHHHHHCT--TEECCSHHHHHHHHH-H-C
T ss_pred cccccccccccHHHHhhChHHHHHHHHHHcCCeeE-ecCCccEEEECCHHHHHHHHhcC--CCCCChhHHHHHHHH-h-C
Confidence 45667899999988866788999999999999999 89998999999999999999876 677665 22111111 1 3
Q ss_pred CceeeCCCCchHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHhccCCCCcchHHhHHHHHHHHHHHHHhcCCCC
Q 045796 131 NDIVFSPYGAQWRRLRKAMVGEMMTNSSLDSCSALRKQVLKNTIRDLYNNKIGKPVDIGELSVSTSVNALENMLWGGGTG 210 (378)
Q Consensus 131 ~~~~~~~~g~~w~~~Rk~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~d~~~~~~~~t~dii~~~~fG~~~~ 210 (378)
.++ +..+|+.|+++||++. ++|+++.++.+.+.++++++++++.|. ++++|+.+++..+++|++++++||.+.
T Consensus 77 ~~l-~~~~g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~----~~~~dl~~~~~~~~~~vi~~~~fG~~~- 149 (389)
T 1n97_A 77 RGL-LTDWGESWKEARKALK-DPFLPKNVRGYREAMEEEARAFFGEWR----GEERDLDHEMLALSLRLLGRALFGKPL- 149 (389)
T ss_dssp SST-TTCCHHHHHHHHHHHC-GGGSHHHHHTTHHHHHHHHHHHHHTCC----SCCEEHHHHHHHHHHHHHHHHHHSSCC-
T ss_pred Ccc-ccCCcHHHHHHHHHhC-cccCHHHHHHHHHHHHHHHHHHHHHcc----CCcCcHHHHHHHHHHHHHHHHHcCCcc-
Confidence 444 4457999999999985 899999999999999999999999875 468999999999999999999999887
Q ss_pred CCCCcchhHHHHHHHHHHHHHhCCCCcccccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCCCCCCCC
Q 045796 211 SGAHKDHTLEMKQLLDDIMELQGVPNISDIFPVLSRFDLQGVERKCKEIALWVEKIFNSAIEKRKNLIAKGTLKFDGRNK 290 (378)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~~~~~ 290 (378)
.+ ++.+.+..+...... ..++++.+++.. ..++..+..+.+.+++.+++ + .+
T Consensus 150 ~~-------~~~~~~~~~~~~~~~----~~~~~~~~~p~~-~~~~~~~~~~~~~~~~~~~i------------~----~r 201 (389)
T 1n97_A 150 SP-------SLAEHALKALDRIMA----QTRSPLALLDLA-AEARFRKDRGALYREAEALI------------V----HP 201 (389)
T ss_dssp CH-------HHHHHHHHHHHHHHH----HHHCGGGGGCHH-HHHHHHHHHHHHHHHHGGGT------------T----ST
T ss_pred hH-------HHHHHHHHHHHHHHH----HHhhHHHhcCCc-hhHHHHHHHHHHHHHHHHHH------------H----HH
Confidence 31 344444444332210 011222333311 11222222222222211111 1 11
Q ss_pred cHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcCchHHHHHHHHHHHh
Q 045796 291 DFLQTFIEMLDSEDSSISLNRTELIALLLDIILGGTDTTTTIMEWTLTKLLQFPVEMKKVQAELAEV 357 (378)
Q Consensus 291 dll~~ll~~~~~~~~~~~l~~~ei~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~iq~kl~~Ei~~~ 357 (378)
|+ + .++++|+.+++.++++||+|||+++|+|++++|++||++|+|+++|++++
T Consensus 202 -----ll----~-----~l~~~~l~~~~~~~~~aG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~~~ 254 (389)
T 1n97_A 202 -----PL----S-----HLPRERALSEAVTLLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEAA 254 (389)
T ss_dssp -----TG----G-----GSCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTCHHHHHHHHHCHHHH
T ss_pred -----hc----c-----cCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 22 1 47899999999999999999999999999999999999999999999875
No 36
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes teichomyceticus} SCOP: a.104.1.0 PDB: 3o1a_A*
Probab=100.00 E-value=1.7e-31 Score=252.52 Aligned_cols=244 Identities=11% Similarity=0.150 Sum_probs=190.3
Q ss_pred CCchHHHHHHHHHHhCCceEEecCC----ccEEEeCCHHHHHHHHHhCCCccCCCCCcccccccccCCCceeeCCCCchH
Q 045796 67 GTDLYKSLTKLADAYGPIYKFWLAN----KLFVVVSSSSIAKEMVRDKDTIFSNRQTTVATLTPTLGGNDIVFSPYGAQW 142 (378)
Q Consensus 67 ~~~~~~~~~~~~~~yG~i~~~~~g~----~~~v~v~dpe~i~~vl~~~~~~f~~r~~~~~~~~~~~~~~~~~~~~~g~~w 142 (378)
..+++..+.+| ++||||+++++|+ .++++|+||+++++|| ++...|++++......... ...+.+++.+|+.|
T Consensus 11 ~~~p~~~~~~l-r~yGpv~~~~~~~~~~g~~~vvv~~~~~v~~vl-~~~~~f~~~~~~~~~~~~~-~~~~~~~~~~g~~~ 87 (384)
T 3oo3_A 11 RLDPVPEFEEL-QKAGPLHEYDTEPGMDGRKQWLVTGHDEVRAIL-ADHERFSSMRPVDDEADRA-LLPGILQAYDPPDH 87 (384)
T ss_dssp TTEECHHHHHH-HHTCSEECCCCC------CEEEECCHHHHHHHH-HCTTTEECSCCCC-----C-CCTTCGGGCCTTHH
T ss_pred ccChhHHHHHH-HhcCCeeecccccccCCCCEEEEcCHHHHHHHH-hCchhccCCcccccccccc-ccccccccCCChhH
Confidence 35778889999 5999999999876 8999999999999999 4456788776543222111 12345566789999
Q ss_pred HHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHhccCCCCcchHHhHHHHHHHHHHHHHhcCCCCCCCCcchhHHHH
Q 045796 143 RRLRKAMVGEMMTNSSLDSCSALRKQVLKNTIRDLYNNKIGKPVDIGELSVSTSVNALENMLWGGGTGSGAHKDHTLEMK 222 (378)
Q Consensus 143 ~~~Rk~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~d~~~~~~~~t~dii~~~~fG~~~~~~~~~~~~~~~~ 222 (378)
+++||++. ++|++++++.+.+.+++.++++++.|.+ .++++|+.+++...+.++++..+||.+.+ ...++.
T Consensus 88 ~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~--~~~~~d~~~~~~~~~~~~v~~~~~G~~~~------~~~~~~ 158 (384)
T 3oo3_A 88 TRLRRTVA-PAYSARRMERLRPRIEEIVEECLDDFES--VGAPVDFVRHAAWPIPAYIACEFLGVPRD------DQAELS 158 (384)
T ss_dssp HHHHHHHG-GGGCHHHHHHHHHHHHHHHHHHHHHHHH--SCSSEEHHHHTTTHHHHHHHHHHHTCCGG------GHHHHH
T ss_pred HHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHHHHh--cCCCccHHHHHHHHHHHHHHHHHcCCCHH------HHHHHH
Confidence 99999985 8999999999999999999999999976 46789999999888877777778997762 124455
Q ss_pred HHHHHHHHHhCCCCcccccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCCCCCCCCcHHHHHHhcccc
Q 045796 223 QLLDDIMELQGVPNISDIFPVLSRFDLQGVERKCKEIALWVEKIFNSAIEKRKNLIAKGTLKFDGRNKDFLQTFIEMLDS 302 (378)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~~~~~dll~~ll~~~~~ 302 (378)
+.+..++. . ...++..+..+.+.+++.++++++++. ...|+++.|++..
T Consensus 159 ~~~~~~~~--~-----------------~~~~~~~~~~~~~~~~~~~~i~~~~~~----------~~~d~l~~ll~~~-- 207 (384)
T 3oo3_A 159 RMIRESRE--S-----------------RLPRQRTLSGLGIVNYTKRLTSGKRRD----------PGDGMIGVIVREH-- 207 (384)
T ss_dssp HHHHHHHH--C-----------------SCHHHHHHHHHHHHHHHHHHHHHHHHS----------CCSSHHHHHHHHH--
T ss_pred HHHHHHhc--c-----------------CChHHHHHHHHHHHHHHHHHHHHHHhC----------CCCCHHHHHHHhc--
Confidence 55554433 0 012344556677888888888877542 2369999999862
Q ss_pred CCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcCchHHHHHHHHHHH
Q 045796 303 EDSSISLNRTELIALLLDIILGGTDTTTTIMEWTLTKLLQFPVEMKKVQAELAE 356 (378)
Q Consensus 303 ~~~~~~l~~~ei~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~iq~kl~~Ei~~ 356 (378)
+..++++++.+++.++++||+|||+++|+|++++|++||++|+|+|+|++.
T Consensus 208 ---~~~l~~~~l~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~~~~l~~E~~~ 258 (384)
T 3oo3_A 208 ---GAEISDEELAGLAEGNLIMAAEQMAAQLAVAVLLLVTHPDQMALLREKPEL 258 (384)
T ss_dssp ---GGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSHHHHHHHHHCGGG
T ss_pred ---CCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHCHHHHHHHHhCHHH
Confidence 346899999999999999999999999999999999999999999999864
No 37
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ...
Probab=99.98 E-value=1.3e-31 Score=255.93 Aligned_cols=261 Identities=13% Similarity=0.072 Sum_probs=195.7
Q ss_pred CCCCCCCCCCCCccc--ccccCC-----CCchHHHHHHHHHHhC--CceEEe-cCCccEEEeCCHHHHHHHHHhCCCccC
Q 045796 46 TAPPLPPGPRGLPLV--GYLPFL-----GTDLYKSLTKLADAYG--PIYKFW-LANKLFVVVSSSSIAKEMVRDKDTIFS 115 (378)
Q Consensus 46 ~~~~~~PgP~~~p~l--G~~~~l-----~~~~~~~~~~~~~~yG--~i~~~~-~g~~~~v~v~dpe~i~~vl~~~~~~f~ 115 (378)
++.++||||.+.|.. +.+-.+ ..+++..+.+|+ +|| ||++++ +| +.++++||+++++||.+ ...|+
T Consensus 8 ~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~p~~~~~~l~-~~G~~pv~~~~~~g--~~vvv~~~~~v~~vl~~-~~~f~ 83 (415)
T 2zwu_A 8 SNANLAPLPPHVPEHLVFDFDMYNPSNLSAGVQEAWAVLQ-ESNVPDLVWTRCNG--GHWIATRGQLIREAYED-YRHFS 83 (415)
T ss_dssp ---CCCCCCTTSCGGGBCCCCTTSCTTGGGCHHHHHHGGG-STTSCSEEEECGGG--CEEEECSHHHHHHHHHC-TTTEE
T ss_pred CccccCCCCCCCCcccccccCcCChhhcccChHHHHHHHH-hcCCCCeEEecCCC--CeEEEcCHHHHHHHHcC-ccccC
Confidence 456799999998864 543222 246788899995 899 999999 55 69999999999999964 44687
Q ss_pred CCC-CcccccccccCCCceeeCCCCchHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHhccCCCCcchHHhH-H
Q 045796 116 NRQ-TTVATLTPTLGGNDIVFSPYGAQWRRLRKAMVGEMMTNSSLDSCSALRKQVLKNTIRDLYNNKIGKPVDIGELS-V 193 (378)
Q Consensus 116 ~r~-~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~d~~~~~-~ 193 (378)
+++ ...... ... +.+.++..+|+.|+++||++. ++|+++.++.+.+.++++++++++.|.. ++++|+...+ .
T Consensus 84 ~~~~~~~~~~-~~~-~~~~l~~~~g~~~~~~R~~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~---~~~~d~~~~~~~ 157 (415)
T 2zwu_A 84 SECPFIPREA-GEA-YDFIPTSMDPPEQRQFRALAN-QVVGMPVVDKLENRIQELACSLIESLRP---QGQCNFTEDYAE 157 (415)
T ss_dssp TTSCSSSHHH-HHH-CCCTTTTCCTTTTHHHHHHHH-HHHSHHHHHHHHHHHHHHHHHHHHHHGG---GTEEEHHHHTTT
T ss_pred CCcccCCCCc-ccc-ccccCccCCCcHHHHHHHHHH-hhhCHHHHHHHHHHHHHHHHHHHHHHHh---cCCccHHHHHHH
Confidence 776 221111 111 233034557999999999985 8999999999999999999999999985 2479998755 7
Q ss_pred HHHHHHHHHHHhcCCCCCCCCcchhHHHHHHHHHHHHHhCCCCcccccccccccCccchHHHHHHHHHHHHHHHHHHHHH
Q 045796 194 STSVNALENMLWGGGTGSGAHKDHTLEMKQLLDDIMELQGVPNISDIFPVLSRFDLQGVERKCKEIALWVEKIFNSAIEK 273 (378)
Q Consensus 194 ~~t~dii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 273 (378)
.+++|+++++ ||.+.+ ...++.+.+..++. . ..|. +.....+.+.+++.++|++
T Consensus 158 ~~~~~vi~~~-~G~~~~------~~~~~~~~~~~~~~---~-----~~P~-----------~~~~~~~~~~~~~~~~i~~ 211 (415)
T 2zwu_A 158 PFPIRIFMLL-AGLPEE------DIPHLKYLTDQMTR---P-----DGSM-----------TFAEAKEALYDYLIPIIEQ 211 (415)
T ss_dssp HHHHHHHHHH-HTCCGG------GHHHHHHHHHHHHS---C-----CSSS-----------CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-cCCCHH------HHHHHHHHHHHHHh---c-----cCHH-----------HHHHHHHHHHHHHHHHHHH
Confidence 8999999999 998772 12345554444332 1 0121 2234455677888888888
Q ss_pred HHHhhhhCCCCCCCCCCcHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcCchHHHHHHHH
Q 045796 274 RKNLIAKGTLKFDGRNKDFLQTFIEMLDSEDSSISLNRTELIALLLDIILGGTDTTTTIMEWTLTKLLQFPVEMKKVQAE 353 (378)
Q Consensus 274 r~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~ei~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~iq~kl~~E 353 (378)
+++. ...|+++.|++...+ +..+++++|.+++.++++||+|||+++|+|++++|++||++|+|+|+|
T Consensus 212 r~~~----------~~~dll~~ll~~~~~---~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E 278 (415)
T 2zwu_A 212 RRQK----------PGTDAISIVANGQVN---GRPITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELIER 278 (415)
T ss_dssp HHHS----------CCSSHHHHHHTCEET---TEECCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHCHHHHHHHHHC
T ss_pred HHhC----------CCCCHHHHHHHhhhc---CCCCCHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHhCHHHHHHHHhC
Confidence 7652 137999999987532 346999999999999999999999999999999999999999999999
Q ss_pred HH
Q 045796 354 LA 355 (378)
Q Consensus 354 i~ 355 (378)
++
T Consensus 279 ~~ 280 (415)
T 2zwu_A 279 PE 280 (415)
T ss_dssp GG
T ss_pred HH
Confidence 64
No 38
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A*
Probab=99.98 E-value=3.6e-31 Score=252.60 Aligned_cols=256 Identities=16% Similarity=0.212 Sum_probs=189.4
Q ss_pred CCCCCCCCCCCCcccccccCCCCchHHHHHHHHHHhCCceEEecCCccEEEeCCHHHHHHHHHhCCCccCCCCCcccccc
Q 045796 46 TAPPLPPGPRGLPLVGYLPFLGTDLYKSLTKLADAYGPIYKFWLANKLFVVVSSSSIAKEMVRDKDTIFSNRQTTVATLT 125 (378)
Q Consensus 46 ~~~~~~PgP~~~p~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~v~dpe~i~~vl~~~~~~f~~r~~~~~~~~ 125 (378)
++.+.+|||+. ..+++..+.+|++ |||| +.++.+.++++||+.+++||.++ ..|++++.... ..
T Consensus 16 ~pl~~~PGp~~----------~~~p~~~~~~l~~-~gpv---~~~~~~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~-~~ 79 (411)
T 2jjn_A 16 TTIDEVPGMAD----------ETALLDWLGTMRE-KQPV---WQDRYGVWHVFRHADVQTVLRDT-ATFSSDPTRVI-EG 79 (411)
T ss_dssp -CCCSCCCSSC----------HHHHHHHHHHHHH-HCSE---EECTTSCEEECSHHHHHHHHHCT-TTEESCGGGGS-TT
T ss_pred CCCCCCCCccc----------ccChHHHHHHHHH-hCCc---ccCCCCeEEECCHHHHHHHHcCc-ccccCcccccC-Cc
Confidence 35567888871 1467888999976 9998 45667899999999999999865 36877753221 11
Q ss_pred cccCCCceeeCCCCchHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHhccCCCCcchHH-hHHHHHHHHHHHHH
Q 045796 126 PTLGGNDIVFSPYGAQWRRLRKAMVGEMMTNSSLDSCSALRKQVLKNTIRDLYNNKIGKPVDIGE-LSVSTSVNALENML 204 (378)
Q Consensus 126 ~~~~~~~~~~~~~g~~w~~~Rk~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~d~~~-~~~~~t~dii~~~~ 204 (378)
....+.++ +..+|+.|+++||++. ++|+++.++.+.+.++++++++++. . ++++|+.. ....+++|+++++
T Consensus 80 ~~~~~~~~-~~~~g~~~~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~--~---~~~~d~~~~~~~~~~~~vi~~~- 151 (411)
T 2jjn_A 80 ASPTPGMI-HEIDPPEHRALRKVVS-SAFTPRTISDLEPRIRDVTRSLLAD--A---GESFDLVDVLAFPLPVTIVAEL- 151 (411)
T ss_dssp CCCCTTCG-GGCCTTHHHHHHHHHH-HHSCHHHHHTTHHHHHHHHHHHHHT--S---CSEEEHHHHTTTHHHHHHHHHH-
T ss_pred cccccccc-ccCCchHHHHHHHHhh-hhcCHHHHHHHHHHHHHHHHHHHhc--C---CCceeHHHHHHHHHHHHHHHHH-
Confidence 11123344 4557999999999985 8999999999999999999999988 2 35799984 4568999999998
Q ss_pred hcCCCCCCCCcchhHHHHHHHHHHHHHhCCCCcccccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCC
Q 045796 205 WGGGTGSGAHKDHTLEMKQLLDDIMELQGVPNISDIFPVLSRFDLQGVERKCKEIALWVEKIFNSAIEKRKNLIAKGTLK 284 (378)
Q Consensus 205 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~ 284 (378)
||.+.+ ..+ ++.+....++... .|. ++. +...++..+....+.+++.++|+++++.
T Consensus 152 fG~~~~-~~~-----~~~~~~~~~~~~~--------~~~--~~~-p~~~~~~~~~~~~~~~~~~~~i~~r~~~------- 207 (411)
T 2jjn_A 152 LGLPPM-DHE-----QFGDWSGALVDIQ--------MDD--PTD-PALAERIADVLNPLTAYLKARCAERRAD------- 207 (411)
T ss_dssp HTCCSC-CCS-----TTCCHHHHHHHSC--------CSC--TTC-HHHHHHHHHHHHHHHHHHHHHHHHHHHS-------
T ss_pred cCCCHH-HHH-----HHHHHHHHHHhcc--------Ccc--ccc-hHHHHHHHHHHHHHHHHHHHHHHHHHhC-------
Confidence 998873 221 1222233333211 111 110 1223455566677888888888887652
Q ss_pred CCCCCCcHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcCchHHHHHHHHHH
Q 045796 285 FDGRNKDFLQTFIEMLDSEDSSISLNRTELIALLLDIILGGTDTTTTIMEWTLTKLLQFPVEMKKVQAELA 355 (378)
Q Consensus 285 ~~~~~~dll~~ll~~~~~~~~~~~l~~~ei~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~iq~kl~~Ei~ 355 (378)
+ ..|+++.|++...+ +..++++|+.+++.++++||+|||+++|+|++++|++||++|+|+++|++
T Consensus 208 -~--~~d~l~~ll~~~~~---~~~l~~~el~~~~~~~~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~E~~ 272 (411)
T 2jjn_A 208 -P--GDDLISRLVLAEVD---GRALDDEEAANFSTALLLAGHITTTVLLGNIVRTLDEHPAHWDAAAEDPG 272 (411)
T ss_dssp -C--CSSHHHHHHHCCBT---TBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTHHHHHHHHCGG
T ss_pred -C--CCCHHHHHHhcccC---CCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHH
Confidence 1 37999999987542 45799999999999999999999999999999999999999999999985
No 39
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A*
Probab=99.98 E-value=3.9e-33 Score=270.77 Aligned_cols=293 Identities=10% Similarity=0.106 Sum_probs=197.1
Q ss_pred CCCCCCCCCCCCcccccccCC-----CC-chHHHHHHHHHHhCC-ceEEecCCcc-------EEEeCCHHHHHHHHHh--
Q 045796 46 TAPPLPPGPRGLPLVGYLPFL-----GT-DLYKSLTKLADAYGP-IYKFWLANKL-------FVVVSSSSIAKEMVRD-- 109 (378)
Q Consensus 46 ~~~~~~PgP~~~p~lG~~~~l-----~~-~~~~~~~~~~~~yG~-i~~~~~g~~~-------~v~v~dpe~i~~vl~~-- 109 (378)
.+.+.||||++||++|++..+ .. +++.++.+++++||+ ||++++++.+ .|+++|++..+.++..
T Consensus 6 ~Pl~~iPGp~g~P~iG~~~~~~~~~~~~g~~~~~~~~~~~kyG~~vf~~~~~~~~~v~~~~~~v~~~~~~~~~~~~~~~~ 85 (473)
T 3dan_A 6 KPLREIPGSYGIPFFQPIKDRLEYFYGTGGRDEYFRSRMQKYQSTVFRANMPPGPFVSSNPKVIVLLDAKSFPILFDVSK 85 (473)
T ss_dssp SCBCCCCCCCCSTTHHHHHHHHHHHHSTTHHHHHHHHHHHHHTCSEEEEECTTCTTTCSCCEEEEECSTTTGGGGGCTTT
T ss_pred CCCCCCCCCCCCcchhhHHHHHHHHHhhcCchHHHHhHHHHhCCeEEEecCCCCCccccCCceEEeecccccceecCCcc
Confidence 456789999999999998864 45 788999999999999 9999987443 4444555544444431
Q ss_pred --CCCccCCCCCcccccccccCCCceeeCCCCchHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHhcc-CCCCc
Q 045796 110 --KDTIFSNRQTTVATLTPTLGGNDIVFSPYGAQWRRLRKAMVGEMMTNSSLDSCSALRKQVLKNTIRDLYNNK-IGKPV 186 (378)
Q Consensus 110 --~~~~f~~r~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~-~~~~~ 186 (378)
+...+...... ............++..+|+.|+++||++. +.|+++ ++.+.+.+++.++++++.|.... +++++
T Consensus 86 ~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~h~~~R~~~~-~~f~~~-~~~~~~~i~~~~~~ll~~~~~~~~~~~~v 162 (473)
T 3dan_A 86 VEKKDLFTGTYMP-STKLTGGYRVLSYLDPSEPRHAQLKNLLF-FMLKNS-SNRVIPQFETTYTELFEGLEAELAKNGKA 162 (473)
T ss_dssp EECSSCTTSSSCC-CGGGGTTSCCGGGCCTTSHHHHHHHHHHH-HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHSCE
T ss_pred eeccccccccccC-CccccCCCcceeeeCCCcHHHHHHHHHHH-HHHHHH-HHHHHHHHHHHHHHHHHHHHHHhccCCcc
Confidence 11122211111 11112111123345667999999999985 899984 89999999999999999997532 24689
Q ss_pred chHHhHHHHHHHHHHHHHhcCCCCCCCCcchhHHHHHHHHHHHHHhCCCCccccccccc-ccCccchHHHHHHHHHHHHH
Q 045796 187 DIGELSVSTSVNALENMLWGGGTGSGAHKDHTLEMKQLLDDIMELQGVPNISDIFPVLS-RFDLQGVERKCKEIALWVEK 265 (378)
Q Consensus 187 d~~~~~~~~t~dii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~-~~~~~~~~~~~~~~~~~~~~ 265 (378)
|+.+++.+++++++++++||.+.+ ..+ ..+.+...+..+... ..+|++. .++ .
T Consensus 163 dl~~~~~~~~~~~i~~~~~G~~~~-~~~--~~~~~~~~~~~~~~~-------~~~p~~~~~lp--~-------------- 216 (473)
T 3dan_A 163 AFNDVGEQAAFRFLGRAYFNSNPE-ETK--LGTSAPTLISSWVLF-------NLAPTLDLGLP--W-------------- 216 (473)
T ss_dssp ECHHHHHHHHHHHHHHHHHSCCGG-GST--TTTCHHHHHHHHHHH-------HHGGGCCCSCC--H--------------
T ss_pred cHHHHHHHHHHHHHHHHHcCCCCC-chh--hhhhHHHHHHHHHHH-------hccchhhhcch--H--------------
Confidence 999999999999999999999884 321 112233333322211 1123321 111 0
Q ss_pred HHHHHHHHH-----------HHhhhhCCCCCCCCCCcHHHHHHhccccCCCCCCCCHHHHHHHHHHHH-hhcccchHHHH
Q 045796 266 IFNSAIEKR-----------KNLIAKGTLKFDGRNKDFLQTFIEMLDSEDSSISLNRTELIALLLDII-LGGTDTTTTIM 333 (378)
Q Consensus 266 ~~~~~i~~r-----------~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~ei~~~~~~~~-~AG~dTTa~tl 333 (378)
++..++.++ .+.. .+...|+++.+++..+ +..++++|++++++.+. +||+|||+++|
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~ll~~~~----~~~l~~~ei~~~~l~~~g~~~~~tta~~l 285 (473)
T 3dan_A 217 FLQEPLLHTFRLPAFLIKSTYNKL-------YDYFQSVATPVMEQAE----KLGVPKDEAVHNILFAVCFNTFGGVKILF 285 (473)
T ss_dssp HHHHHHHSSSCCCGGGTHHHHHHH-------HHHHHHHCHHHHHHHH----HHTCCHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred HHHHHHhhhccchHhhhhhchhhh-------HHHHHHHHHHHHHhHh----hcCCCHHHHHHHHHHHHHHhccccHHHHH
Confidence 011111110 0000 0001345555666432 24689999999987777 88889999999
Q ss_pred HHHHHHHhc-CchHHHHHHHHHHHhhCC-C-CCcccCCCCCCcCccCC
Q 045796 334 EWTLTKLLQ-FPVEMKKVQAELAEVVGL-N-NNVEESHLPKLKCLDAT 378 (378)
Q Consensus 334 ~~~l~~L~~-~P~iq~kl~~Ei~~~~~~-~-~~~~~~~l~~LpYL~av 378 (378)
+|++++|++ ||++|+|||+||++++++ + +.++++++++||||+||
T Consensus 286 ~~~l~~L~~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~l~~lp~l~a~ 333 (473)
T 3dan_A 286 PNTLKWIGLAGENLHTQLAEEIRGAIKSYGDGNVTLEAIEQMPLTKSV 333 (473)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHHHHHHHHSTTSCCHHHHHTCHHHHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHhhcccCCCCCHHHHhcCchHHHH
Confidence 999999999 799999999999999774 3 67899999999999875
No 40
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A*
Probab=99.98 E-value=8.7e-31 Score=249.32 Aligned_cols=245 Identities=13% Similarity=0.184 Sum_probs=186.7
Q ss_pred CCCchHHHHHHHHHHhCCceEEec-CCccEEEeCCHHHHHHHHHhCCCccCCCCC--c-ccccccc--cCCCceeeCCCC
Q 045796 66 LGTDLYKSLTKLADAYGPIYKFWL-ANKLFVVVSSSSIAKEMVRDKDTIFSNRQT--T-VATLTPT--LGGNDIVFSPYG 139 (378)
Q Consensus 66 l~~~~~~~~~~~~~~yG~i~~~~~-g~~~~v~v~dpe~i~~vl~~~~~~f~~r~~--~-~~~~~~~--~~~~~~~~~~~g 139 (378)
+..+++..+.+| ++||||+++++ |+.+.++++||+++++||.++ .|++++. . ....... ..+.++ +..+|
T Consensus 17 ~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~l-~~~~g 92 (403)
T 3aba_A 17 CPFLPPDGIADI-RAAAPVTRATFTSGHEAWLVTGYEEVRALLRDS--SFSVQVPHALHTQDGVVTQKPGRGSL-LWQDE 92 (403)
T ss_dssp STTSCCTTHHHH-HHHCSEEEEECTTSCEEEEECCHHHHHHHHHCT--TEESCCSCCTTSSSCCCCCCCCTTCC-TTCCT
T ss_pred cccChhHHHHHH-HhcCCeeeeccCCCceEEEEcCHHHHHHHHcCC--Cccccccccccccccccccccccccc-ccCCc
Confidence 345677788899 89999999997 889999999999999999875 4766642 1 1110011 123444 55679
Q ss_pred chHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHhccCCCCcchHHhH-HHHHHHHHHHHHhcCCCCCCCCcchh
Q 045796 140 AQWRRLRKAMVGEMMTNSSLDSCSALRKQVLKNTIRDLYNNKIGKPVDIGELS-VSTSVNALENMLWGGGTGSGAHKDHT 218 (378)
Q Consensus 140 ~~w~~~Rk~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~d~~~~~-~~~t~dii~~~~fG~~~~~~~~~~~~ 218 (378)
+.|+++||++. ++|+++.++.+.+.++++++++++.|.+ .++++|+...+ ..+++|+++. +||.+.+ ..
T Consensus 93 ~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~--~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~------~~ 162 (403)
T 3aba_A 93 PEHTSDRKLLA-KEFTVRRMQALRPNIQRIVDEHLDAIEA--RGGPVDLVKTFANAVPSMVISD-LFGVPVE------RR 162 (403)
T ss_dssp THHHHHHHHHH-HHSCHHHHHTTHHHHHHHHHHHHHHHHH--HCSCEEHHHHTTTHHHHHHHHH-HHTCCGG------GH
T ss_pred hhHHHHHHHHH-hhcCHHHHHHHHHHHHHHHHHHHHHHHh--cCCCccHHHHHHHHHHHHHHHH-HcCCCHH------HH
Confidence 99999999986 7999999999999999999999999984 25689998666 5799999998 7997762 12
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCCCCCCCCcHHHHHHh
Q 045796 219 LEMKQLLDDIMELQGVPNISDIFPVLSRFDLQGVERKCKEIALWVEKIFNSAIEKRKNLIAKGTLKFDGRNKDFLQTFIE 298 (378)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~~~~~dll~~ll~ 298 (378)
..+.+.+..++. . ..| .++.....+.+.+++.++|+++++. . ..|+++.|++
T Consensus 163 ~~~~~~~~~~~~---~-----~~~----------p~~~~~~~~~~~~~~~~~i~~r~~~--------~--~~dll~~ll~ 214 (403)
T 3aba_A 163 AEFQDIAEAMMR---V-----DQD----------AAATEAAGMRLGGLLYQLVQERRAN--------P--GDDLISALIT 214 (403)
T ss_dssp HHHHHHHHHHSB---S-----SSC----------HHHHHHHHHHHHHHHHHHHHHHHHS--------C--CSSHHHHHHT
T ss_pred HHHHHHHHHHHh---c-----cCc----------HHHHHHHHHHHHHHHHHHHHHHHhC--------C--CCCHHHHHHh
Confidence 334333332211 0 000 1344556667888888888887652 1 3699999998
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcCchHHHHHHHHHH
Q 045796 299 MLDSEDSSISLNRTELIALLLDIILGGTDTTTTIMEWTLTKLLQFPVEMKKVQAELA 355 (378)
Q Consensus 299 ~~~~~~~~~~l~~~ei~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~iq~kl~~Ei~ 355 (378)
..++ +..+++++|.+++.++++||+|||+++|+|++++|++||++|+|+++|++
T Consensus 215 ~~~~---~~~l~~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~ 268 (403)
T 3aba_A 215 TEDP---DGVVDDMFLMNAAGTLLIAAHDTTACMIGLGTALLLDSPDQLALLREDPS 268 (403)
T ss_dssp SCCT---TCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCGG
T ss_pred hccC---CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHhCHH
Confidence 7532 45799999999999999999999999999999999999999999999964
No 41
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron, metal-binding, oxidoreductase; HET: HEM; 1.35A {Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A* 3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A*
Probab=99.97 E-value=6.2e-31 Score=252.63 Aligned_cols=266 Identities=13% Similarity=0.103 Sum_probs=190.3
Q ss_pred CCCCCCCCCCcccccccCCCCchHHHHHHHHHHhCCceEEe--------cCCccEEEeCCHHHHHHHHHhCCCccCCCCC
Q 045796 48 PPLPPGPRGLPLVGYLPFLGTDLYKSLTKLADAYGPIYKFW--------LANKLFVVVSSSSIAKEMVRDKDTIFSNRQT 119 (378)
Q Consensus 48 ~~~~PgP~~~p~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~--------~g~~~~v~v~dpe~i~~vl~~~~~~f~~r~~ 119 (378)
...||+|.+.++++.......+++..+.++ ++||||+++. +|+.+.++|++|+.+++||.+. ..|++++.
T Consensus 17 ~~~p~~~~~~~~~~~~~~~~~~p~~~~~~l-r~~gPv~~~~~~~g~~~~lG~~~~~vv~~~~~v~~vl~~~-~~fs~~~~ 94 (433)
T 3ivy_A 17 VPSPNLPPGFDFTDPAIYAERLPVAEFAEL-RSAAPIWWNGQDPGKGGGFHDGGFWAITKLNDVKEISRHS-DVFSSYEN 94 (433)
T ss_dssp ---CCCCTTCCTTCHHHHTTCCCHHHHHHH-HHHCSEEEEECCTTCSTTCCSSEEEEECSHHHHHHHHHCT-TTEESTTT
T ss_pred cCCCCCCCCCCCCCHHHhhcCCccHHHHHH-HhcCCEEecccccccccccCCCCEEEEecHHHHHHHHcCh-hhccCCcc
Confidence 345777777776654433334678899999 8899999998 5557899999999999999654 56777654
Q ss_pred ccccc--------ccccCCCceeeCCCCchHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHhccCCCCcchHHh
Q 045796 120 TVATL--------TPTLGGNDIVFSPYGAQWRRLRKAMVGEMMTNSSLDSCSALRKQVLKNTIRDLYNNKIGKPVDIGEL 191 (378)
Q Consensus 120 ~~~~~--------~~~~~~~~~~~~~~g~~w~~~Rk~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~d~~~~ 191 (378)
..... .....+.+ ++..+|+.|+++||++. ++|+++.++.+.+.+++.++++++.|.. ++++|+...
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~-l~~~dg~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~---~~~~d~~~~ 169 (433)
T 3ivy_A 95 GVIPRFKNDIAREDIEVQRFV-MLNMDAPHHTRLRKIIS-RGFTPRAVGRLHDELQERAQKIAAEAAA---AGSGDFVEQ 169 (433)
T ss_dssp CSCCCCCTTCCHHHHHGGGGS-GGGCCTTHHHHHHHHHG-GGSCHHHHHTTHHHHHHHHHHHHHHHHH---HCEEEHHHH
T ss_pred cccccccccccccccccccCC-ccccChHHHHHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHHHhh---CCCeeHHHH
Confidence 32221 11111233 45667999999999985 8999999999999999999999999974 457899888
Q ss_pred H-HHHHHHHHHHHHhcCCCCCCCCcchhHHHHHHHHHHHHHhCCCCcccccccccccCccchHHHHHHHHHHHHHHHHHH
Q 045796 192 S-VSTSVNALENMLWGGGTGSGAHKDHTLEMKQLLDDIMELQGVPNISDIFPVLSRFDLQGVERKCKEIALWVEKIFNSA 270 (378)
Q Consensus 192 ~-~~~t~dii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (378)
+ ..+++++++++ ||.+.+ ....+.+... ... ....|.+.. .+..+..+.+.+++.++
T Consensus 170 ~~~~~~~~vi~~l-~G~~~~------~~~~~~~~~~----~~~----~~~~p~~~~-------~~~~~~~~~~~~~~~~~ 227 (433)
T 3ivy_A 170 VSCELPLQAIAGL-LGVPQE------DRGKLFHWSN----EMT----GNEDPEYAH-------IDPKASSAELIGYAMKM 227 (433)
T ss_dssp TTSHHHHHHHHHH-HTCCHH------HHHHHHHHHT----TCS----CCCCGGGTT-------CCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-cCCCHH------HHHHHHHHHH----HHh----ccCCchhhh-------HHHHHHHHHHHHHHHHH
Confidence 7 99999999996 885431 1222222211 111 111222211 12234556677888888
Q ss_pred HHHHHHhhhhCCCCCCCCCCcHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcCchHHHHH
Q 045796 271 IEKRKNLIAKGTLKFDGRNKDFLQTFIEMLDSEDSSISLNRTELIALLLDIILGGTDTTTTIMEWTLTKLLQFPVEMKKV 350 (378)
Q Consensus 271 i~~r~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~ei~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~iq~kl 350 (378)
|+++++. ...|+++.|++...+ +..++++||.+++.++++||+|||+++|+|++++|++||++|+|+
T Consensus 228 i~~r~~~----------~~~dll~~ll~~~~~---~~~ls~~ei~~~~~~ll~AG~dTTa~~l~~~l~~L~~~P~~~~~l 294 (433)
T 3ivy_A 228 AEEKAKN----------PADDIVTQLIQADID---GEKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHPDQWELY 294 (433)
T ss_dssp HHHC-----------------CHHHHHSCC-----CCCCCHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred HHHHhcC----------CCCcHHHHHHhhhcC---CCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCHHHHHHH
Confidence 8776542 246999999987542 457999999999999999999999999999999999999999999
Q ss_pred HHHHH
Q 045796 351 QAELA 355 (378)
Q Consensus 351 ~~Ei~ 355 (378)
++|++
T Consensus 295 ~~E~~ 299 (433)
T 3ivy_A 295 KKVRP 299 (433)
T ss_dssp HHHCC
T ss_pred HhCcc
Confidence 99974
No 42
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2, anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A {Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A* 2d0e_A* 1t93_A* 2d09_A* 3tzo_A*
Probab=99.97 E-value=6.4e-31 Score=250.48 Aligned_cols=257 Identities=16% Similarity=0.192 Sum_probs=191.8
Q ss_pred CCCCCCCCCcccccccCCCCchHHHHHHHHHHhCCceEEec-CCcc-EEEeCCHHHHHHHHHhCCCccCCCCCcccc---
Q 045796 49 PLPPGPRGLPLVGYLPFLGTDLYKSLTKLADAYGPIYKFWL-ANKL-FVVVSSSSIAKEMVRDKDTIFSNRQTTVAT--- 123 (378)
Q Consensus 49 ~~~PgP~~~p~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~-g~~~-~v~v~dpe~i~~vl~~~~~~f~~r~~~~~~--- 123 (378)
+.+|||+++|+.++ ...+++..+.+++ +||||+++++ ++.+ .++|+||+.+++||.+. .|++++.....
T Consensus 8 ~~~~~~~~~p~~~~---~~~~p~~~~~~l~-~~Gpv~~~~~~~g~~p~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~ 81 (406)
T 1s1f_A 8 QAVPPVRDWPAVDL---PGSDFDPVLTELM-REGPVTRISLPNGEGWAWLVTRHDDVRLVTNDP--RFGREAVMDRQVTR 81 (406)
T ss_dssp CCSCCEEECCCCCC---CTTCCCHHHHHHH-HHCSEEEEECSBSBSCEEEECSHHHHHHHHTCT--TEESTTTTTTTBCB
T ss_pred hhccCCCCCCCCcc---cccCchHHHHHHH-hcCCeeeeccCCCcccEEEEcCHHHHHHHHcCC--CccCCcCCCCCccc
Confidence 57888888888777 3356788888885 7999999996 5666 99999999999999863 57766533211
Q ss_pred -cc-cccCCCceeeCCCCchHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHhccCCCCcchHHhH-HHHHHHHH
Q 045796 124 -LT-PTLGGNDIVFSPYGAQWRRLRKAMVGEMMTNSSLDSCSALRKQVLKNTIRDLYNNKIGKPVDIGELS-VSTSVNAL 200 (378)
Q Consensus 124 -~~-~~~~~~~~~~~~~g~~w~~~Rk~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~d~~~~~-~~~t~dii 200 (378)
.. ....+.+++ ..+|+.|+++||++. ++|+++.++.+.+.++++++++++.|.+ .++++|+...+ ..+++|++
T Consensus 82 ~~~~~~~~~~~l~-~~dg~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~--~~~~~d~~~~~~~~~~~~vi 157 (406)
T 1s1f_A 82 LAPHFIPARGAVG-FLDPPDHTRLRRSVA-AAFTARGVERVRERSRGMLDELVDAMLR--AGPPADLTEAVLSPFPIAVI 157 (406)
T ss_dssp SSSSCSSCTTSGG-GCCTTHHHHHHHHHH-HHHSHHHHHHHHHHHHHHHHHHHHHHHH--HCSSEEHHHHTTTHHHHHHH
T ss_pred ccccccccccccc-cCCchHHHHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHHHHh--cCCCccHHHHHhhHhHHHHH
Confidence 11 111234544 457999999999986 7999999999999999999999999984 25689988666 57999999
Q ss_pred HHHHhcCCCCCCCCcchhHHHHHHHHHHHHHhCCCCcccccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 045796 201 ENMLWGGGTGSGAHKDHTLEMKQLLDDIMELQGVPNISDIFPVLSRFDLQGVERKCKEIALWVEKIFNSAIEKRKNLIAK 280 (378)
Q Consensus 201 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~ 280 (378)
+. +||.+.+ ....+......++.... | + ++.....+.+.+++.++|+++++
T Consensus 158 ~~-~~G~~~~------~~~~~~~~~~~~~~~~~--------~-----~-----~~~~~~~~~~~~~~~~~i~~r~~---- 208 (406)
T 1s1f_A 158 CE-LMGVPAT------DRHSMHTWTQLILSSSH--------G-----A-----EVSERAKNEMNAYFSDLIGLRSD---- 208 (406)
T ss_dssp HH-HHTCCGG------GHHHHHHHHHHHHHHHT--------T-----C-----CCCHHHHTHHHHHHHHHHHTSCC----
T ss_pred HH-HhCCCHH------HHHHHHHHHHHHHhccC--------C-----H-----HHHHHHHHHHHHHHHHHHHHHHh----
Confidence 99 5998762 12345554444443211 1 0 01122344566667777765532
Q ss_pred CCCCCCCCCCcHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcCchHHHHHHHHHH
Q 045796 281 GTLKFDGRNKDFLQTFIEMLDSEDSSISLNRTELIALLLDIILGGTDTTTTIMEWTLTKLLQFPVEMKKVQAELA 355 (378)
Q Consensus 281 ~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~ei~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~iq~kl~~Ei~ 355 (378)
....|+++.|++..++ ..++++||++++.++++|| |||+++|+|++++|++||++|+|+++|++
T Consensus 209 ------~~~~d~l~~ll~~~~~----~~ls~~el~~~~~~l~~AG-eTt~~~l~~~l~~L~~~P~~~~~l~~E~~ 272 (406)
T 1s1f_A 209 ------SAGEDVTSLLGAAVGR----DEITLSEAVGLAVLLQIGG-EAVTNNSGQMFHLLLSRPELAERLRSEPE 272 (406)
T ss_dssp ------SCCCSHHHHHHHHHHT----TSSCHHHHHHHHHHHHHHT-THHHHHHHHHHHHHHHSHHHHHHHHHCGG
T ss_pred ------CCCCCHHHHHHHhhcc----cCCCHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHHCHHHHHHHHhCHH
Confidence 1246999999986432 4689999999999999999 99999999999999999999999999974
No 43
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding; HET: HEM; 2.30A {Streptomyces avermitilis}
Probab=99.97 E-value=2.2e-31 Score=253.87 Aligned_cols=245 Identities=11% Similarity=0.116 Sum_probs=182.9
Q ss_pred CCCCchHHHHHHHHHHhCCceEEec-CCccEEEeCCHHHHHHHHHhCCCccCCCCCcccccc---ccc----CCCceeeC
Q 045796 65 FLGTDLYKSLTKLADAYGPIYKFWL-ANKLFVVVSSSSIAKEMVRDKDTIFSNRQTTVATLT---PTL----GGNDIVFS 136 (378)
Q Consensus 65 ~l~~~~~~~~~~~~~~yG~i~~~~~-g~~~~v~v~dpe~i~~vl~~~~~~f~~r~~~~~~~~---~~~----~~~~~~~~ 136 (378)
.+..+++..+.+| ++||||+++++ |+.+.|+|+||+.+++||.++. |++++....... ... .+.+ ++.
T Consensus 21 ~~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~ 96 (408)
T 3abb_A 21 TCPYQPPKAYEER-RGESPLTQVTLFDGRPAWLITGHAEGRALLVDPR--LSSDWGHPDFPVVVRRTEDRGGLAFP-LIG 96 (408)
T ss_dssp SSTTSCCHHHHHH-CCSSSEEEEECTTSCEEEEECCHHHHHHHHTCTT--EECCTTSTTCCCCC---------CCT-TTT
T ss_pred ccccCchHHHHHH-HhcCCeeeeecCCCCcEEEEeCHHHHHHHHcCCC--cccccccccccccccCCccccccccc-ccc
Confidence 3445778899999 89999999997 8889999999999999998653 444432110100 110 1123 455
Q ss_pred CCCchHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHhccCCCCcchHHhHH-HHHHHHHHHHHhcCCCCCCCCc
Q 045796 137 PYGAQWRRLRKAMVGEMMTNSSLDSCSALRKQVLKNTIRDLYNNKIGKPVDIGELSV-STSVNALENMLWGGGTGSGAHK 215 (378)
Q Consensus 137 ~~g~~w~~~Rk~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~d~~~~~~-~~t~dii~~~~fG~~~~~~~~~ 215 (378)
.+|+.|+++||++. ++|+++.++.+.+.++++++++++.|.. .|+++|+...+. .+++|+++. +||.+.+
T Consensus 97 ~~g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~--~g~~~d~~~~~~~~~~~~vi~~-~~G~~~~----- 167 (408)
T 3abb_A 97 VDDPVHARQRRMLI-PSFGVKRMNAIRPRLQSLVDRLLDDMLA--KGPGADLVSAFALPVPSVAICE-LLGVPYG----- 167 (408)
T ss_dssp CCTTHHHHHHHHHG-GGGCHHHHHHHHHHHHHHHHHHHHHHHH--TCSCEEHHHHTTTHHHHHHHHH-HHTCCGG-----
T ss_pred CCchHHHHHHHHhh-hhcCHHHHHHHHHHHHHHHHHHHHHHHh--cCCCeehHHHHHHHHHHHHHHH-HhCCCHH-----
Confidence 68999999999985 8999999999999999999999999985 356899988776 599999997 7997762
Q ss_pred chhHHHHHHHHHHHHHhCCCCcccccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCCCCCCCCcHHHH
Q 045796 216 DHTLEMKQLLDDIMELQGVPNISDIFPVLSRFDLQGVERKCKEIALWVEKIFNSAIEKRKNLIAKGTLKFDGRNKDFLQT 295 (378)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~~~~~dll~~ 295 (378)
....+.+.+..++.. . .| + +..+..+.+.+++.++|+++++. . .+|+++.
T Consensus 168 -~~~~~~~~~~~~~~~-~-------~~--~---------~~~~~~~~~~~~~~~~i~~r~~~--------~--~~d~l~~ 217 (408)
T 3abb_A 168 -DHDFFEECSRNFVGA-A-------TS--A---------EADAAFGELYTYLHGLVGRKQAE--------P--EDGLLDE 217 (408)
T ss_dssp -GHHHHHHHHHHHC-------------------------CCSSHHHHHHHHHHHHHHHHHHS--------C--CSSHHHH
T ss_pred -HHHHHHHHHHHHhcc-c-------ch--H---------HHHHHHHHHHHHHHHHHHHHHhC--------C--CCCHHHH
Confidence 123444444333210 0 01 1 11123445677788888877652 1 3699999
Q ss_pred HHhccccCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcCchHHHHHHHHHH
Q 045796 296 FIEMLDSEDSSISLNRTELIALLLDIILGGTDTTTTIMEWTLTKLLQFPVEMKKVQAELA 355 (378)
Q Consensus 296 ll~~~~~~~~~~~l~~~ei~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~iq~kl~~Ei~ 355 (378)
|++..++ +..++++||++++.++++||+|||+++|+|++++|++||++|+|+|+|++
T Consensus 218 ll~~~~~---~~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~~ 274 (408)
T 3abb_A 218 LIARQLE---EGDLDHDEVVMIALVLLVAGHETTVNAIALGALTLIQHPEQIDVLLRDPG 274 (408)
T ss_dssp HHHHHHT---SSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCGGGGGGGGSCHH
T ss_pred HHhcccC---CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHhCHH
Confidence 9987542 35699999999999999999999999999999999999999999999864
No 44
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=99.97 E-value=4.9e-31 Score=251.47 Aligned_cols=250 Identities=18% Similarity=0.260 Sum_probs=186.5
Q ss_pred CCCCchHHHHHHHHHHhCCceEEecCCccEEEeCCHHHHHHHHHhCCCccCCCCC--cccc-cc-----cc--cCCCcee
Q 045796 65 FLGTDLYKSLTKLADAYGPIYKFWLANKLFVVVSSSSIAKEMVRDKDTIFSNRQT--TVAT-LT-----PT--LGGNDIV 134 (378)
Q Consensus 65 ~l~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~v~dpe~i~~vl~~~~~~f~~r~~--~~~~-~~-----~~--~~~~~~~ 134 (378)
.+..+++..+.+| ++||||+++++++.+.++|+||+++++||.++. |++++. +... .. .. ..+.+ +
T Consensus 12 ~~~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l 87 (408)
T 1odo_A 12 PTGADHHTEHRTL-REGGPATWVDVLGVQAWSVSDPVLLKQLLTSSD--VSKDARAHWPAFGEVVGTWPLALWVAVEN-M 87 (408)
T ss_dssp TTCTTHHHHHHHH-HTTCSEEEEEETTEEEEEECCHHHHHHHTTCTT--EESCHHHHCTTHHHHTTTCTTTHHHHCCS-G
T ss_pred cccCChHHHHHHH-HHhCCeEEeccCCCCEEEECCHHHHHHHHcCCC--ccccccccccccccccccccccccccccc-c
Confidence 3445789999999 999999999988889999999999999998653 443321 1100 00 00 01233 4
Q ss_pred eCCCCchHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHhccCCCCcchHHhHH-HHHHHHHHHHHhcCCCCCCC
Q 045796 135 FSPYGAQWRRLRKAMVGEMMTNSSLDSCSALRKQVLKNTIRDLYNNKIGKPVDIGELSV-STSVNALENMLWGGGTGSGA 213 (378)
Q Consensus 135 ~~~~g~~w~~~Rk~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~d~~~~~~-~~t~dii~~~~fG~~~~~~~ 213 (378)
+..+|+.|+++||++. ++|++++++.+.+.++++++++++.|.+..+++++|+..++. .+++|+++. +||.+.+
T Consensus 88 ~~~~g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~--- 162 (408)
T 1odo_A 88 FTAYGPNHRKLRRLVA-PAFSARRVDAMRPAVEAMVTGLVDRLAELPAGEPVDLRQELAYPLPIAVIGH-LMGVPQD--- 162 (408)
T ss_dssp GGCCHHHHHHHHHTTG-GGGSHHHHHHHHHHHHHHHHHHHHHHHHSCTTSCEEHHHHTTTHHHHHHHHH-HHTCCHH---
T ss_pred cccCChHHHHHHHHhh-hhcCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcchHHHHhhhhHHHHHHH-HhCCCHH---
Confidence 5567999999999985 899999999999999999999999998532356899998886 599999996 7997651
Q ss_pred CcchhHHHHHHHHHHHHHhCCCCcccccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCCCCCCCCcHH
Q 045796 214 HKDHTLEMKQLLDDIMELQGVPNISDIFPVLSRFDLQGVERKCKEIALWVEKIFNSAIEKRKNLIAKGTLKFDGRNKDFL 293 (378)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~~~~~dll 293 (378)
...++.+.+..++.. . . . .++..+..+.+.+++.++|+++++. . .+|++
T Consensus 163 ---~~~~~~~~~~~~~~~----~----------~--~--~~~~~~~~~~~~~~~~~~i~~r~~~--------~--~~d~l 211 (408)
T 1odo_A 163 ---RRDGFRALVDGVFDT----T----------L--D--QAEAQANTARLYEVLDQLIAAKRAT--------P--GDDMT 211 (408)
T ss_dssp ---HHHHHHHHHHHHHCT----T----------C--C--HHHHHHHHHHHHHHHHHHHHHHHHS--------C--CSSHH
T ss_pred ---HHHHHHHHHHHHhcc----c----------C--C--HHHHHHHHHHHHHHHHHHHHHHhhC--------C--CCCHH
Confidence 123344444333210 0 0 0 1344556667888888888887652 1 37999
Q ss_pred HHHHhccccCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcCchHHHHHHHHH
Q 045796 294 QTFIEMLDSEDSSISLNRTELIALLLDIILGGTDTTTTIMEWTLTKLLQFPVEMKKVQAEL 354 (378)
Q Consensus 294 ~~ll~~~~~~~~~~~l~~~ei~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~iq~kl~~Ei 354 (378)
+.|++...++.++..+++++|.+++.++++||+|||+++|+|++++|++||++|+|||+|+
T Consensus 212 ~~ll~~~~~~~~~~~l~~~ei~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~ 272 (408)
T 1odo_A 212 SLLIAARDDEGDGDRLSPEELRDTLLLMISAGYETTVNVIDQAVHTLLTRPDQLALVRKGE 272 (408)
T ss_dssp HHHHHHHCC-----CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHCHHHHHHHHHTS
T ss_pred HHHHHhcccccccCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHCHHHHHHHHhCH
Confidence 9999865321113469999999999999999999999999999999999999999999984
No 45
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding, oxidoreductase, omega-hydroxylation, iron, heme, fatty acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium tuberculosis} PDB: 2wm4_A*
Probab=99.97 E-value=1.8e-30 Score=249.43 Aligned_cols=251 Identities=12% Similarity=0.112 Sum_probs=192.4
Q ss_pred CchHHHHHHHHHHhCCceEEecC-------CccEEEeCCHHHHHHHHHhCCCccCCCCCc--c-cccccccCCCceeeCC
Q 045796 68 TDLYKSLTKLADAYGPIYKFWLA-------NKLFVVVSSSSIAKEMVRDKDTIFSNRQTT--V-ATLTPTLGGNDIVFSP 137 (378)
Q Consensus 68 ~~~~~~~~~~~~~yG~i~~~~~g-------~~~~v~v~dpe~i~~vl~~~~~~f~~r~~~--~-~~~~~~~~~~~~~~~~ 137 (378)
.+++..+.+|+ +||||++++++ +.+.++|+||+.+++||.++ ..|++++.. . ........+.++++ .
T Consensus 44 ~~p~~~~~~l~-~~Gpv~~~~~~~~~~~~~g~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~l~~-~ 120 (435)
T 2wm5_A 44 DVRDGAFATLR-REAPISFWPTIELPGFVAGNGHWALTKYDDVFYASRHP-DIFSSYPNITINDQTPELAEYFGSMIV-L 120 (435)
T ss_dssp HHHHHHHHHHH-HHCSEEEECCCCC---CCCCCEEEECSHHHHHHHHHCT-TTEECSSCCSSSCCCHHHHHHHHGGGG-C
T ss_pred CChhHHHHHHH-hcCCeEecccccccccCCCCCeEEEcCHHHHHHHHcCc-ccccCccccccCccccchhhhcccccc-C
Confidence 35778888995 79999999985 56899999999999999875 468877632 1 11111111234444 5
Q ss_pred CCchHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHhccCCCCcchHHhH-HHHHHHHHHHHHhcCCCCCCCCcc
Q 045796 138 YGAQWRRLRKAMVGEMMTNSSLDSCSALRKQVLKNTIRDLYNNKIGKPVDIGELS-VSTSVNALENMLWGGGTGSGAHKD 216 (378)
Q Consensus 138 ~g~~w~~~Rk~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~d~~~~~-~~~t~dii~~~~fG~~~~~~~~~~ 216 (378)
+|+.|+++||++. ++|+++.++.+.+.++++++++++.|.+..++.++|+...+ ..+++|+++++ ||.+.+
T Consensus 121 dg~~h~~~R~~l~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~vd~~~~~~~~~~~~vi~~~-~G~~~~------ 192 (435)
T 2wm5_A 121 DDPRHQRLRSIVS-RAFTPKVVARIEAAVRDRAHRLVSSMIANNPDRQADLVSELAGPLPLQIICDM-MGIPKA------ 192 (435)
T ss_dssp CTTHHHHHHHHHH-HTCCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEEHHHHTTTHHHHHHHHHH-HTCCGG------
T ss_pred CcHHHHHHHHHhH-HhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcEehHHHHHHHHHHHHHHHH-cCCCHH------
Confidence 7999999999985 89999999999999999999999999763223479998765 78999999999 998772
Q ss_pred hhHHHHHHHHHHHHHhCCCCcccccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCCCCCCCCcHHHHH
Q 045796 217 HTLEMKQLLDDIMELQGVPNISDIFPVLSRFDLQGVERKCKEIALWVEKIFNSAIEKRKNLIAKGTLKFDGRNKDFLQTF 296 (378)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~~~~~dll~~l 296 (378)
...++.+....++... .|.+ ++ ..++.....+.+.+++.++|+++++. ...|+++.|
T Consensus 193 ~~~~~~~~~~~~~~~~--------~p~~--~~---~~~~~~~~~~~~~~~~~~~i~~r~~~----------~~~dll~~l 249 (435)
T 2wm5_A 193 DHQRIFHWTNVILGFG--------DPDL--AT---DFDEFMQVSADIGAYATALAEDRRVN----------HHDDLTSSL 249 (435)
T ss_dssp GHHHHHHHHHHHHHTT--------CTTS--CC---CHHHHHHHHHHHHHHHHHHHHHHHHS----------CCSSHHHHH
T ss_pred HHHHHHHHHHHHhccC--------Ccch--hh---hHHHHHHHHHHHHHHHHHHHHHHhcC----------CCCCHHHHH
Confidence 1234555555544321 1322 11 12455566777888888899887652 137999999
Q ss_pred HhccccCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcCchHHHHHHHHHH
Q 045796 297 IEMLDSEDSSISLNRTELIALLLDIILGGTDTTTTIMEWTLTKLLQFPVEMKKVQAELA 355 (378)
Q Consensus 297 l~~~~~~~~~~~l~~~ei~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~iq~kl~~Ei~ 355 (378)
++...+ +..+++++|.+++.++++||+|||+++|+|++++|++||++|+|+|+|++
T Consensus 250 l~~~~~---~~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~ 305 (435)
T 2wm5_A 250 VEAEVD---GERLSSREIASFFILLVVAGNETTRNAITHGVLALSRYPEQRDRWWSDFD 305 (435)
T ss_dssp HHCCBT---TBCCCHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHCHHHHHHHHHSHH
T ss_pred Hhhhcc---CCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCHHHHHHHhChH
Confidence 987542 44699999999999999999999999999999999999999999999987
No 46
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 4fmx_A* 4fyz_A* 1t2b_A* 3bdz_A* 3be0_A*
Probab=99.97 E-value=9.3e-31 Score=248.73 Aligned_cols=244 Identities=14% Similarity=0.064 Sum_probs=189.6
Q ss_pred CCchHHHHHHHHHHh--CCceEEecCCccEEEeCCHHHHHHHHHhCCCccCCCCCcccccccccCCCceeeCCCCchHHH
Q 045796 67 GTDLYKSLTKLADAY--GPIYKFWLANKLFVVVSSSSIAKEMVRDKDTIFSNRQTTVATLTPTLGGNDIVFSPYGAQWRR 144 (378)
Q Consensus 67 ~~~~~~~~~~~~~~y--G~i~~~~~g~~~~v~v~dpe~i~~vl~~~~~~f~~r~~~~~~~~~~~~~~~~~~~~~g~~w~~ 144 (378)
..+++..+.+|+++| |||+++++|+ +.++|+||+.+++|| ++...|++++........ ..+...++..+|+.|++
T Consensus 18 ~~~p~~~~~~l~~~Y~~Gpv~~~~~~~-~~~vv~~~~~v~~vl-~~~~~f~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~ 94 (398)
T 4fb2_A 18 DGTPHAFFEALRDEAETTPIGWSEAYG-GHWVVAGYKEIQAVI-QNTKAFSNKGVTFPRYET-GEFELMMAGQDDPVHKK 94 (398)
T ss_dssp TSSSHHHHHHHHHHHTTCSEEEECGGG-CEEEECSHHHHHHHH-TCCSSEEGGGCSSSCC-----CCCTTTTCCTTHHHH
T ss_pred hcChhHHHHHHHhcCCCCCeEEecCCC-CEEEEccHHHHHHHH-hChhhccCCcccccCCCC-cccccCcccCCchHHHH
Confidence 457899999999999 9999999886 699999999999999 455578777654332111 12223346677999999
Q ss_pred HHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHhccCCCCcchHHh-HHHHHHHHHHHHHhcCCCCCCCCcchhHHHHH
Q 045796 145 LRKAMVGEMMTNSSLDSCSALRKQVLKNTIRDLYNNKIGKPVDIGEL-SVSTSVNALENMLWGGGTGSGAHKDHTLEMKQ 223 (378)
Q Consensus 145 ~Rk~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~d~~~~-~~~~t~dii~~~~fG~~~~~~~~~~~~~~~~~ 223 (378)
+||++. ++|+++.++.+.+.++++++++++.|.+ ++++|+... ...++++++++ +||.+. . ...++.+
T Consensus 95 ~R~~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~---~~~~d~~~~~~~~~~~~vi~~-~~G~~~-~-----~~~~~~~ 163 (398)
T 4fb2_A 95 YRQLVA-KPFSPEATDLFTEQLRQSTNDLIDARIE---LGEGDAATWLANEIPARLTAI-LLGLPP-E-----DGDTYRR 163 (398)
T ss_dssp HHHHHH-TTTCHHHHHTTHHHHHHHHHHHHHTTTT---TTEEEHCCCCCTTHHHHHHHH-HTTSCG-G-----GHHHHHH
T ss_pred HHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHHHhh---cCCccHHHHHHHHHHHHHHHH-HcCCCH-H-----HHHHHHH
Confidence 999985 8999999999999999999999998874 346886544 46899999999 688765 1 2344555
Q ss_pred HHHHHHHHhCCCCcccccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCCCCCCCCcHHHHHHhccccC
Q 045796 224 LLDDIMELQGVPNISDIFPVLSRFDLQGVERKCKEIALWVEKIFNSAIEKRKNLIAKGTLKFDGRNKDFLQTFIEMLDSE 303 (378)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~~~~~dll~~ll~~~~~~ 303 (378)
.+..++. |. ..++..+..+.+.+++.+.|+++++. ...|+++.|++...+
T Consensus 164 ~~~~~~~-----------~~--------~~~~~~~~~~~~~~~~~~~i~~r~~~----------~~~d~l~~ll~~~~~- 213 (398)
T 4fb2_A 164 WVWAITH-----------VE--------NPEEGAEIFAELVAHARTLIAERRTN----------PGNDIMSRVIMSKID- 213 (398)
T ss_dssp HHHHHHH-----------CC--------CHHHHHHHHHHHHHHHHHHHHHHHHS----------CCSSHHHHHHHCCBT-
T ss_pred HHHHHhc-----------CC--------CHHHHHHHHHHHHHHHHHHHHHHHhC----------CCCCHHHHHHHcccC-
Confidence 5444432 00 01344556677888888888887652 147999999987543
Q ss_pred CCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcCchHHHHHHHHHHH
Q 045796 304 DSSISLNRTELIALLLDIILGGTDTTTTIMEWTLTKLLQFPVEMKKVQAELAE 356 (378)
Q Consensus 304 ~~~~~l~~~ei~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~iq~kl~~Ei~~ 356 (378)
+..+++++|++++.++++||+|||+++|+|++++|++||++|+|+++|++.
T Consensus 214 --~~~l~~~~i~~~~~~l~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~~ 264 (398)
T 4fb2_A 214 --GESLSEDDLIGFFTILLLGGIDNTARFLSSVFWRLAWDIELRRRLIAHPEL 264 (398)
T ss_dssp --TBCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHCGGG
T ss_pred --CCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHHH
Confidence 446999999999999999999999999999999999999999999999853
No 47
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans}
Probab=99.97 E-value=1.3e-30 Score=251.61 Aligned_cols=256 Identities=13% Similarity=0.099 Sum_probs=189.0
Q ss_pred hHHHHHHHHHHhCCce--EEe-cCCccEEEeCCHHHHHHHHHhCCCccCCCCCcccccccc-------------cCCCce
Q 045796 70 LYKSLTKLADAYGPIY--KFW-LANKLFVVVSSSSIAKEMVRDKDTIFSNRQTTVATLTPT-------------LGGNDI 133 (378)
Q Consensus 70 ~~~~~~~~~~~yG~i~--~~~-~g~~~~v~v~dpe~i~~vl~~~~~~f~~r~~~~~~~~~~-------------~~~~~~ 133 (378)
++..+.++ ++||||+ ++. +|+.+.++|++++.+++|+.+. ..|++++......... ..+. .
T Consensus 47 p~~~~~~l-r~~gPV~~~~~~~~g~~~~~vvt~~~~v~~vl~~~-~~fs~~~~~~~~~~~~~~~~~~~~~gg~~~~~~-~ 123 (450)
T 3tkt_A 47 LLDRFDAL-RAEAPVAKVVAPDDEHEPFWLVSSFDGVMKASKDN-ATFLNNPKSTVFTLRVGEMMAKAITGGSPHLVE-S 123 (450)
T ss_dssp HHHHHHHH-HHHCSEEEECCTTCSSCCEEEECSHHHHHHHHHCT-TTEESSSSCSSCCCHHHHHHHHHHHTSCSCSSC-C
T ss_pred chHHHHHH-HhcCCeecccccCCCCCCEEEEecHHHHHHHHhCc-ccccCCCcccccccccccccccccccccccccc-C
Confidence 77788888 6899999 888 7888999999999999999765 5688776533211100 0112 3
Q ss_pred eeCCCCchHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHhccCCCCcchHHhH-HHHHHHHHHHHHhcCCCCCC
Q 045796 134 VFSPYGAQWRRLRKAMVGEMMTNSSLDSCSALRKQVLKNTIRDLYNNKIGKPVDIGELS-VSTSVNALENMLWGGGTGSG 212 (378)
Q Consensus 134 ~~~~~g~~w~~~Rk~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~d~~~~~-~~~t~dii~~~~fG~~~~~~ 212 (378)
++..+|+.|+++||++. ++|++++++.+.+.++++++++++.+.+ .++++|+...+ ..+++++|+++ ||.+.+
T Consensus 124 l~~~dg~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~--~~~~~dl~~~~~~~~~~~vi~~l-~G~~~~-- 197 (450)
T 3tkt_A 124 LVQMDAPKHPKLRRLTQ-DWFMPKNLARLDGEIRKIANEAIDRMLG--AGEEGDFMALVAAPYPLHVVMQI-LGVPPE-- 197 (450)
T ss_dssp GGGCCTTHHHHHHHHHH-TTTSHHHHGGGHHHHHHHHHHHHHHHHH--TCSEEEHHHHTTTHHHHHHHHHH-TTCCGG--
T ss_pred cccCCCHHHHHHHHHhh-hhhCHHHHHHHHHHHHHHHHHHHHHHHh--cCCCEeeHHHHHHHHHHHHHHHH-cCCChh--
Confidence 45667999999999985 8999999999999999999999999986 36789988777 69999999996 886651
Q ss_pred CCcchhHHHHHHHHHHHHHhCCCCcccccccccccC-ccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCCCCCCCCc
Q 045796 213 AHKDHTLEMKQLLDDIMELQGVPNISDIFPVLSRFD-LQGVERKCKEIALWVEKIFNSAIEKRKNLIAKGTLKFDGRNKD 291 (378)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~~~~~d 291 (378)
+...+.+....++.. ....+.|+..++. .....++..+....+.+++.++|+++++. ..+|
T Consensus 198 ----~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~----------~~~d 259 (450)
T 3tkt_A 198 ----DEPKMLFLTQQMFGG----QDEDMNKSGLKDLPPEQISQIVAGAVAEFERYFAGLAAERRRN----------PTDD 259 (450)
T ss_dssp ----GHHHHHHHHHTTSCC----C----------------HHHHHHHHHHHHHHHHHHHHHHHHHS----------CCSS
T ss_pred ----HHHHHHHHHHHHhcc----ccchhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhC----------CCCC
Confidence 123344433332211 1111222222221 12233556666777888899999887652 1469
Q ss_pred HHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcCchHHHHHHHHHH
Q 045796 292 FLQTFIEMLDSEDSSISLNRTELIALLLDIILGGTDTTTTIMEWTLTKLLQFPVEMKKVQAELA 355 (378)
Q Consensus 292 ll~~ll~~~~~~~~~~~l~~~ei~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~iq~kl~~Ei~ 355 (378)
+++.|++...+ +..++++||++++.++++||+|||+++|+|++++|++||++|+|+|+|++
T Consensus 260 ll~~ll~~~~~---~~~ls~~ei~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~~l~~E~~ 320 (450)
T 3tkt_A 260 VATVIANAVVD---GEPMSDRDTAGYYIITASAGHDTTSASSAGAALALARDPDLFARVKADRN 320 (450)
T ss_dssp HHHHHHTCEET---TEECCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHCHHHHHHHHHCGG
T ss_pred HHHHHHhcccc---CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHCHH
Confidence 99999987643 44699999999999999999999999999999999999999999999974
No 48
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET: HEM; 2.90A {Streptomyces coelicolor} PDB: 4fxb_A*
Probab=99.97 E-value=3.2e-30 Score=246.49 Aligned_cols=244 Identities=13% Similarity=0.103 Sum_probs=187.7
Q ss_pred CCchHHHHHHHHHHhCCceEEecC-CccEEEeCCHHHHHHHHHhCCCccCCCCCcc---cccccc----cCCCceeeCCC
Q 045796 67 GTDLYKSLTKLADAYGPIYKFWLA-NKLFVVVSSSSIAKEMVRDKDTIFSNRQTTV---ATLTPT----LGGNDIVFSPY 138 (378)
Q Consensus 67 ~~~~~~~~~~~~~~yG~i~~~~~g-~~~~v~v~dpe~i~~vl~~~~~~f~~r~~~~---~~~~~~----~~~~~~~~~~~ 138 (378)
..+++..+.+|+++ |||++++++ +.+.++|+||+.+++||.++ .|++++... ...... ..+.+ ++..+
T Consensus 28 ~~dp~~~~~~l~~~-Gpv~~~~~~~g~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~d 103 (417)
T 3tyw_A 28 PFAAPAEYAALRTD-DPVARVTLPTRREAWVVTRYDDVRELLSDP--RVSADIRRPGFPALGEGEQEAGARFRP-FIRTD 103 (417)
T ss_dssp TTSCCTHHHHHHHT-CTEEEEECTTSCEEEEECCHHHHHHHHHCT--TEECCSSSTTCCCSSTTTSTTSSSCCC-GGGCC
T ss_pred ccCchHHHHHHHhh-CCeeeeecCCCCCeEEEcCHHHHHHHHcCC--CcccCCccccccccccccccccccccc-hhhcC
Confidence 45778889999988 999999986 58999999999999999876 576653211 111100 12333 45567
Q ss_pred CchHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHhccCCCCcchHHhH-HHHHHHHHHHHHhcCCCCCCCCcch
Q 045796 139 GAQWRRLRKAMVGEMMTNSSLDSCSALRKQVLKNTIRDLYNNKIGKPVDIGELS-VSTSVNALENMLWGGGTGSGAHKDH 217 (378)
Q Consensus 139 g~~w~~~Rk~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~d~~~~~-~~~t~dii~~~~fG~~~~~~~~~~~ 217 (378)
|+.|+++||++. ++|++++++.+.+.++++++++++.+.+ .|+++|+...+ ..+++++++.+ ||.+. ...
T Consensus 104 g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~--~g~~~d~~~~~~~~~~~~vi~~~-~G~~~-~~~---- 174 (417)
T 3tyw_A 104 APEHTRYRRMLL-PAFTVRRVRAMRPAVQARVDEILDGMLA--AGGPVDLVSAYANAVSTSVICEL-LGIPR-HDL---- 174 (417)
T ss_dssp HHHHHHHHHHHG-GGGCHHHHHHTHHHHHHHHHHHHHHHHH--HCSSEEHHHHTHHHHHHHHHHHH-HTCCT-TTT----
T ss_pred CcHHHHHHHHHH-hhhCHHHHHHHHHHHHHHHHHHHHHHHh--hCCCcchHHHHHHHHHHHHHHHH-hCCCH-HHH----
Confidence 999999999985 8999999999999999999999999986 36789999987 58999999997 99887 322
Q ss_pred hHHHHHHHHHHHHHhCCCCcccccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCCCCCCCCcHHHHHH
Q 045796 218 TLEMKQLLDDIMELQGVPNISDIFPVLSRFDLQGVERKCKEIALWVEKIFNSAIEKRKNLIAKGTLKFDGRNKDFLQTFI 297 (378)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~~~~~dll~~ll 297 (378)
..+......++.. .+ ..++..+..+.+.+++.++|+++++. ...|+++.|+
T Consensus 175 -~~~~~~~~~~~~~---------~~---------~~~~~~~~~~~l~~~~~~~i~~r~~~----------~~~d~l~~ll 225 (417)
T 3tyw_A 175 -EFFRDVTRISGSR---------NS---------TAEQVSEALGGLFGLLGGLVAERREE----------PRDDLISKLV 225 (417)
T ss_dssp -THHHHHHHHHHSS---------SS---------CTTHHHHHHHHHHHHHHHHHHHHHSS----------CCSSHHHHHH
T ss_pred -HHHHHHHHHHhcc---------cC---------CHHHHHHHHHHHHHHHHHHHHHHhhC----------CCCCHHHHHH
Confidence 2233333332210 00 01234455667788888888877542 2479999999
Q ss_pred hccccCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcCchHHHHHHHHHH
Q 045796 298 EMLDSEDSSISLNRTELIALLLDIILGGTDTTTTIMEWTLTKLLQFPVEMKKVQAELA 355 (378)
Q Consensus 298 ~~~~~~~~~~~l~~~ei~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~iq~kl~~Ei~ 355 (378)
+...+ +..++++++++++.++++||+|||+++|+|++++|++||++|+|+|+|++
T Consensus 226 ~~~~~---~~~ls~~el~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~ 280 (417)
T 3tyw_A 226 TDHLV---PGNVTTEQLLSTLGITINAGRETTTSMIALSTLLLLDRPELPAELRKDPD 280 (417)
T ss_dssp HHTTT---TTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTHHHHHHHHCGG
T ss_pred Hhccc---CCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCHHHHHHHHhChH
Confidence 87543 34699999999999999999999999999999999999999999999974
No 49
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105, oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea recticatena}
Probab=99.97 E-value=1.1e-30 Score=249.28 Aligned_cols=261 Identities=15% Similarity=0.147 Sum_probs=189.6
Q ss_pred CCCCCCCCCCCcccccccCCCCchHHHHHHHHHHhCCceEEec-CCccEEEeCCHHHHHHHHHhCCCccCCCCCccccc-
Q 045796 47 APPLPPGPRGLPLVGYLPFLGTDLYKSLTKLADAYGPIYKFWL-ANKLFVVVSSSSIAKEMVRDKDTIFSNRQTTVATL- 124 (378)
Q Consensus 47 ~~~~~PgP~~~p~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~-g~~~~v~v~dpe~i~~vl~~~~~~f~~r~~~~~~~- 124 (378)
.....|||.. |+- ..+..+++..+.+|+ +||||+++++ |+.+.++|+||+.+++||.+. .|++++......
T Consensus 5 ~~~~~~g~~~-~~~---~~~~~~p~~~~~~l~-~~Gpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~ 77 (413)
T 2z36_A 5 VADELAGLEL-PVE---RGCPFAPPAAYERLR-ERAPINKVRLTSGGQAWWVSGHEEARAVLADG--RFSSDKRKDGFPL 77 (413)
T ss_dssp -----CCCEE-CCC---CCBTTBCCHHHHHHH-HHCSEEEEEETTSCEEEEECSHHHHHHHHHCT--TEECCTTSTTCCC
T ss_pred HHHHhccccC-CCC---cccccCchHHHHHHH-HcCCeeEeecCCCceEEEEecHHHHHHHHcCC--CcccCccccCccc
Confidence 3455677763 331 223457788899997 7899999997 889999999999999999874 577665321111
Q ss_pred ---cccc-----CCCceeeCCCCchHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHhccCCCCcchHHhH-HHH
Q 045796 125 ---TPTL-----GGNDIVFSPYGAQWRRLRKAMVGEMMTNSSLDSCSALRKQVLKNTIRDLYNNKIGKPVDIGELS-VST 195 (378)
Q Consensus 125 ---~~~~-----~~~~~~~~~~g~~w~~~Rk~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~d~~~~~-~~~ 195 (378)
.... ++.+.++..+|+.|+++||++. ++|+++.++.+.+.++++++++++.|.+. +++++|+...+ ..+
T Consensus 78 ~~~~~~~~~~~~~~~~~l~~~~g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~~-~~~~~d~~~~~~~~~ 155 (413)
T 2z36_A 78 FTLDAATLQQLRSQPPLMLGMDGAEHSAARRPVI-GEFTVKRLAALRPRIQDIVDHFIDDMLAT-DQRPVDLVQALSLPV 155 (413)
T ss_dssp SSCCHHHHHHHTTSCCCGGGCCHHHHHHHHHHHH-GGGSHHHHHHHHHHHHHHHHHHHHHHTTC-SCSSEEHHHHTTTHH
T ss_pred cccccccccccccccccccccCchHHHHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCccHHHHHhhhh
Confidence 0011 2345134557999999999985 89999999999999999999999999742 25689988655 479
Q ss_pred HHHHHHHHHhcCCCCCCCCcchhHHHHHHHHHHHHHhCCCCcccccccccccCccchHHHHHHHHHHHHHHHHHHHHHHH
Q 045796 196 SVNALENMLWGGGTGSGAHKDHTLEMKQLLDDIMELQGVPNISDIFPVLSRFDLQGVERKCKEIALWVEKIFNSAIEKRK 275 (378)
Q Consensus 196 t~dii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~ 275 (378)
++++++.+ ||.+.+ ....+......+ .. . . .. ++..+..+.+.+++.++|++++
T Consensus 156 ~~~vi~~~-~G~~~~------~~~~~~~~~~~~----~~--------~---~--~~--~~~~~~~~~~~~~~~~~i~~r~ 209 (413)
T 2z36_A 156 PSLVICEL-LGVPYT------DHDFFQSRTTMM----VS--------R---T--SM--EDRRRAFAELRAYIDDLITRKE 209 (413)
T ss_dssp HHHHHHHH-HTCCGG------GHHHHHHHHHHT----TC--------S---S--CH--HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH-hCCCHH------HHHHHHHHHHHH----hc--------c---c--Cc--HHHHHHHHHHHHHHHHHHHHHH
Confidence 99999995 997762 122333322211 10 0 0 00 3444556677888888888775
Q ss_pred HhhhhCCCCCCCCCCcHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcCchHHHHHHHHHH
Q 045796 276 NLIAKGTLKFDGRNKDFLQTFIEMLDSEDSSISLNRTELIALLLDIILGGTDTTTTIMEWTLTKLLQFPVEMKKVQAELA 355 (378)
Q Consensus 276 ~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~ei~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~iq~kl~~Ei~ 355 (378)
+. ...|+++.|++...+ +..+++++|.+++.++++||+|||+++|+|++++|++||++|+|+|+|++
T Consensus 210 ~~----------~~~dll~~ll~~~~~---~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~ 276 (413)
T 2z36_A 210 SE----------PGDDLFSRQIARQRQ---EGTLDHAGLVSLAFLLLTAGHETTANMISLGVVGLLSHPEQLTVVKANPG 276 (413)
T ss_dssp SS----------CCSSHHHHHHHHHHH---HSCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCGG
T ss_pred hC----------CCCCHHHHHHHhhcC---CCCCCHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHhCHHHHHHHHhChH
Confidence 42 136999999986432 34799999999999999999999999999999999999999999999974
No 50
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis; HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB: 2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A*
Probab=99.97 E-value=2.4e-30 Score=247.23 Aligned_cols=245 Identities=15% Similarity=0.191 Sum_probs=186.2
Q ss_pred CCCchHHHHHHHHHHhCCceEEec-CCccEEEeCCHHHHHHHHHhCCCccCCCCCc-ccccccc--cCCCceeeCCCCch
Q 045796 66 LGTDLYKSLTKLADAYGPIYKFWL-ANKLFVVVSSSSIAKEMVRDKDTIFSNRQTT-VATLTPT--LGGNDIVFSPYGAQ 141 (378)
Q Consensus 66 l~~~~~~~~~~~~~~yG~i~~~~~-g~~~~v~v~dpe~i~~vl~~~~~~f~~r~~~-~~~~~~~--~~~~~~~~~~~g~~ 141 (378)
+..+++..+.+| ++||||+++++ |+.+.++|+||+.+++||.++ .|++++.. ....... ..+.++ +..+|+.
T Consensus 35 ~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~i~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~l-~~~dg~~ 110 (417)
T 2y5n_A 35 HGLTLAGRYGEL-QETEPVSRVRPPYGEEAWLVTRYEDVRAVLGDG--RFVRGPSMTRDEPRTRPEMVKGGL-LSMDPPE 110 (417)
T ss_dssp SSCCCCHHHHHH-HHHCSEEEEECSBSCCEEEECSHHHHHHHHTCT--TEESGGGGTSCCCBSSSSCCCCSG-GGCCTTH
T ss_pred hccCchHHHHHH-HhcCCeEeeccCCCceEEEECCHHHHHHHHcCC--CcccCccccccccccCcccccccC-ccCCchH
Confidence 345678899999 89999999997 889999999999999999875 46665432 1111111 123444 4567999
Q ss_pred HHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHhccCCC-CcchHHhH-HHHHHHHHHHHHhcCCCCCCCCcchhH
Q 045796 142 WRRLRKAMVGEMMTNSSLDSCSALRKQVLKNTIRDLYNNKIGK-PVDIGELS-VSTSVNALENMLWGGGTGSGAHKDHTL 219 (378)
Q Consensus 142 w~~~Rk~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~-~~d~~~~~-~~~t~dii~~~~fG~~~~~~~~~~~~~ 219 (378)
|+++||++. ++|+++.++.+.+.++++++++++.|.. ++ ++|+...+ ..+++|+++. +||.+. . ...
T Consensus 111 h~~~R~~l~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~---~~~~vdl~~~~~~~~~~~vi~~-~~G~~~-~-----~~~ 179 (417)
T 2y5n_A 111 HSRLRRLVV-KAFTARRAESLRPRAREIAHELVDQMAA---TGQPADLVAMFARQLPVRVICE-LLGVPS-A-----DHD 179 (417)
T ss_dssp HHHHHHHHH-HHSCHHHHHHTHHHHHHHHHHHHHHHHH---HCSSEEHHHHTTTTHHHHHHHH-HHTCCG-G-----GHH
T ss_pred HHHHHHHHh-hhcCHHHHHHHHHHHHHHHHHHHHHHHh---CCCCeeHHHHHHHHhHHHHHHH-HcCCCH-H-----HHH
Confidence 999999986 7999999999999999999999999974 34 89998766 4699999998 699776 2 122
Q ss_pred HHHHHHHHHHHHhCCCCcccccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCCCCCCCCcHHHHHHhc
Q 045796 220 EMKQLLDDIMELQGVPNISDIFPVLSRFDLQGVERKCKEIALWVEKIFNSAIEKRKNLIAKGTLKFDGRNKDFLQTFIEM 299 (378)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~~~~~dll~~ll~~ 299 (378)
.+.+.+..++. .+. . . .++..+....+.+++.++|+++++. ..+|+++.|++.
T Consensus 180 ~~~~~~~~~~~---------~~~----~--~--~~~~~~~~~~l~~~~~~~i~~r~~~----------~~~dll~~ll~~ 232 (417)
T 2y5n_A 180 RFTRWSGAFLS---------TAE----V--T--AEEMQEAAEQAYAYMGDLIDRRRKE----------PTDDLVSALVQA 232 (417)
T ss_dssp HHHHHHHTTST---------TCC----C--C--HHHHHHHHHHHHHHHHHHHHHHHHS----------CCSSHHHHHHHC
T ss_pred HHHHHHHHHhc---------ccC----C--C--HHHHHHHHHHHHHHHHHHHHHHHhC----------CCCCHHHHHHhh
Confidence 33332221110 000 0 1 1344556667888888888887652 136999999987
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcCchHHHHHHHHHH
Q 045796 300 LDSEDSSISLNRTELIALLLDIILGGTDTTTTIMEWTLTKLLQFPVEMKKVQAELA 355 (378)
Q Consensus 300 ~~~~~~~~~l~~~ei~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~iq~kl~~Ei~ 355 (378)
.++ +..+++++|++++.++++||+|||+++|+|++++|++||++|+|+|+|++
T Consensus 233 ~~~---~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~ 285 (417)
T 2y5n_A 233 RDQ---QDSLSEQELLDLAIGLLVAGYESTTTQIADFVYLLMTRPELRRQLLDRPE 285 (417)
T ss_dssp CBT---TBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG
T ss_pred hcc---CCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHCHHHHHHHHhCHH
Confidence 542 45799999999999999999999999999999999999999999999963
No 51
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM; 1.60A {Mycobacterium tuberculosis}
Probab=99.97 E-value=5.6e-30 Score=243.34 Aligned_cols=243 Identities=14% Similarity=0.123 Sum_probs=187.4
Q ss_pred CchHHHHHHHHHHhCCceEEecCCccEEEeCCHHHHHHHHHhCCCccCCCCCcccccccccCCCceeeCCCCchHHHHHH
Q 045796 68 TDLYKSLTKLADAYGPIYKFWLANKLFVVVSSSSIAKEMVRDKDTIFSNRQTTVATLTPTLGGNDIVFSPYGAQWRRLRK 147 (378)
Q Consensus 68 ~~~~~~~~~~~~~yG~i~~~~~g~~~~v~v~dpe~i~~vl~~~~~~f~~r~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk 147 (378)
.+++..+.+|++ ||||+++. . +.++|+||+++++||.++. .|++++... .... .+.++ +..+|+.|+++||
T Consensus 18 ~~p~~~~~~l~~-~Gpv~~~~--~-~~vvv~~~~~v~~vl~~~~-~f~~~~~~~-~~~~--~~~~l-~~~~g~~h~~~R~ 88 (398)
T 2xkr_A 18 REARAAYRWMRA-NQPVFRDR--N-GLAAASTYQAVIDAERQPE-LFSNAGGIR-PDQP--ALPMM-IDMDDPAHLLRRK 88 (398)
T ss_dssp TTHHHHHHHHHH-HCSEEECT--T-CCEEECSHHHHHHHHTCTT-TEESTTCSS-TTSC--CCSSG-GGCCTTHHHHHHH
T ss_pred cChhHHHHHHHh-cCCeeecC--C-CeEEEecHHHHHHHHhCcc-cccCccccC-Cccc--ccccc-cccCchHHHHHHH
Confidence 467888999987 99999764 3 7999999999999997654 687765432 1111 23444 4457999999999
Q ss_pred HHHHhhcCcchhhhhHHHHHHHHHHHHHHHHhccCCCCcchH-HhHHHHHHHHHHHHHhcCCCCCCCCcchhHHHHHHHH
Q 045796 148 AMVGEMMTNSSLDSCSALRKQVLKNTIRDLYNNKIGKPVDIG-ELSVSTSVNALENMLWGGGTGSGAHKDHTLEMKQLLD 226 (378)
Q Consensus 148 ~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~d~~-~~~~~~t~dii~~~~fG~~~~~~~~~~~~~~~~~~~~ 226 (378)
++. ++|+++.++.+.+.+++.++++++.|.+ ++++|+. ++...+++|+|+++ ||.+.+ ...++.+...
T Consensus 89 ~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~---~~~~d~~~~~~~~~~~~vi~~~-fG~~~~------~~~~~~~~~~ 157 (398)
T 2xkr_A 89 LVN-AGFTRKRVKDKEASIAALCDTLIDAVCE---RGECDFVRDLAAPLPMAVIGDM-LGVRPE------QRDMFLRWSD 157 (398)
T ss_dssp HHG-GGSCHHHHHTTHHHHHHHHHHHHHTTTT---TSEEEHHHHTTTHHHHHHHHHH-HTCCGG------GHHHHHHHHH
T ss_pred Hhh-hhhCHHHHHHHHHHHHHHHHHHHHhhhh---cCCccHHHHHHHHHHHHHHHHH-hCCCHH------HHHHHHHHHH
Confidence 985 8999999999999999999999999874 3479998 55568999999998 998762 1234555555
Q ss_pred HHHHHhCCCCcccccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCCCCCCCCcHHHHHHhccccCCCC
Q 045796 227 DIMELQGVPNISDIFPVLSRFDLQGVERKCKEIALWVEKIFNSAIEKRKNLIAKGTLKFDGRNKDFLQTFIEMLDSEDSS 306 (378)
Q Consensus 227 ~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~ 306 (378)
.++.... |. +++ ...++.....+.+.+++.++|+++++. ...|+++.|++...+ +
T Consensus 158 ~~~~~~~--------~~--~~p--~~~~~~~~~~~~~~~~~~~~i~~r~~~----------~~~dll~~ll~~~~~---~ 212 (398)
T 2xkr_A 158 DLVTFLS--------SH--VSQ--EDFQITMDAFAAYNDFTRATIAARRAD----------PTDDLVSVLVSSEVD---G 212 (398)
T ss_dssp HHHHHHT--------SC--CCH--HHHHHHHHHHHHHHHHHHHHHHHHHHS----------CCSSHHHHHHHCCBT---T
T ss_pred HHHhccC--------cc--cch--hhHHHHHHHHHHHHHHHHHHHHHHHhC----------CCCCHHHHHHHhhcc---C
Confidence 5443321 11 111 223455566677888888888887652 137999999987542 4
Q ss_pred CCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcCchHHHHHHHHHH
Q 045796 307 ISLNRTELIALLLDIILGGTDTTTTIMEWTLTKLLQFPVEMKKVQAELA 355 (378)
Q Consensus 307 ~~l~~~ei~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~iq~kl~~Ei~ 355 (378)
..+++++|++++.++++||+|||+++|+|++++|++||++|+|+++|++
T Consensus 213 ~~ls~~ei~~~~~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~E~~ 261 (398)
T 2xkr_A 213 ERLSDDELVMETLLILIGGDETTRHTLSGGTEQLLRNRDQWDLLQRDPS 261 (398)
T ss_dssp BCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHSHHHHHHHHHCGG
T ss_pred CCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHCHHHHHHHHhCHH
Confidence 5699999999999999999999999999999999999999999999975
No 52
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A*
Probab=99.97 E-value=4.1e-30 Score=245.25 Aligned_cols=244 Identities=15% Similarity=0.194 Sum_probs=186.6
Q ss_pred CCCchHHHHHHHHHHhCCceEEecCCccEEEeCCHHHHHHHHHhCCCccCCCCCcccc-----cccccCCCceeeCCCCc
Q 045796 66 LGTDLYKSLTKLADAYGPIYKFWLANKLFVVVSSSSIAKEMVRDKDTIFSNRQTTVAT-----LTPTLGGNDIVFSPYGA 140 (378)
Q Consensus 66 l~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~v~dpe~i~~vl~~~~~~f~~r~~~~~~-----~~~~~~~~~~~~~~~g~ 140 (378)
+..+++..+.+| ++||||+++++|+.+.++|+||+.+++||.++. |++++..... ......+.++ +..+|+
T Consensus 18 ~~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~~~~l-~~~~g~ 93 (411)
T 3a4g_A 18 FWQNPHPAYAAL-RAEDPVRKLALPDGPVWLLTRYADVREAFVDPR--LSKDWRHTLPEDQRADMPATPTPMM-ILMDPP 93 (411)
T ss_dssp GTTCCHHHHHHH-HHHCSEEEEEETTEEEEEECSHHHHHHHHTCTT--EESCGGGGSCGGGCTTCCSCSSCCG-GGCCTT
T ss_pred hhcCchHHHHHH-HhcCCeeeccCCCCCEEEEecHHHHHHHHhCCC--cccccccccccccccccCccccccc-ccCCch
Confidence 345778899999 999999999998889999999999999998763 7776542211 1111123444 456799
Q ss_pred hHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHhccCCCCcchH-HhHHHHHHHHHHHHHhcCCCCCCCCcchhH
Q 045796 141 QWRRLRKAMVGEMMTNSSLDSCSALRKQVLKNTIRDLYNNKIGKPVDIG-ELSVSTSVNALENMLWGGGTGSGAHKDHTL 219 (378)
Q Consensus 141 ~w~~~Rk~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~d~~-~~~~~~t~dii~~~~fG~~~~~~~~~~~~~ 219 (378)
.|+++||++. +.|+++.++.+.+.++++++++++.|.. ++++|+. ++...+++|+|+.+ ||.+. . ...
T Consensus 94 ~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~---~~~vd~~~~~~~~~~~~vi~~~-~G~~~-~-----~~~ 162 (411)
T 3a4g_A 94 DHTRLRKLVG-RSFTVRRMNELEPRITEIADGLLAGLPT---DGPVDLMREYAFQIPVQVICEL-LGVPA-E-----DRD 162 (411)
T ss_dssp HHHHHHHHHH-TTCCHHHHHHHHHHHHHHHHHHHHHSCS---SSCEEHHHHTTTTHHHHHHHHH-HTCCG-G-----GHH
T ss_pred HHHHHHHHhh-hhhCHHHHHHHHHHHHHHHHHHHHHHHh---cCCccHHHHHHHHhHHHHHHHH-hCCCH-H-----HHH
Confidence 9999999985 8999999999999999999999999874 3579996 45578999999975 99776 2 123
Q ss_pred HHHHHHHHHHHHhCCCCcccccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCCCCCCCCcHHHHHHhc
Q 045796 220 EMKQLLDDIMELQGVPNISDIFPVLSRFDLQGVERKCKEIALWVEKIFNSAIEKRKNLIAKGTLKFDGRNKDFLQTFIEM 299 (378)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~~~~~dll~~ll~~ 299 (378)
.+.+.+..++.. .| + ++.....+.+.+++.++|+++++. . ..|+++.|++.
T Consensus 163 ~~~~~~~~~~~~---------~p-----~-----~~~~~~~~~~~~~~~~~i~~r~~~--------~--~~d~l~~ll~~ 213 (411)
T 3a4g_A 163 DFSAWSSVLVDD---------SP-----A-----DDKNAAMGKLHGYLSDLLERKRTE--------P--DDALLSSLLAV 213 (411)
T ss_dssp HHHHHHHHHTTS---------SC-----T-----TTHHHHHHHHHHHHHHHHHHHHHS--------C--CSSHHHHHHHC
T ss_pred HHHHHHHHHhcc---------CC-----H-----HHHHHHHHHHHHHHHHHHHHHHhC--------C--CCCHHHHHHHh
Confidence 344433332210 12 0 122345566778888888887652 1 36999999987
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcCchHHHHHHHHHH
Q 045796 300 LDSEDSSISLNRTELIALLLDIILGGTDTTTTIMEWTLTKLLQFPVEMKKVQAELA 355 (378)
Q Consensus 300 ~~~~~~~~~l~~~ei~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~iq~kl~~Ei~ 355 (378)
.++ ++..+++++|++++.++++||+|||+++|+|++++|++||++|+|+++|++
T Consensus 214 ~~~--~~~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~ 267 (411)
T 3a4g_A 214 SDE--DGDRLSQEELVAMAMLLLIAGHETTVNLIGNGVLALLTHPDQRKLLAEDPS 267 (411)
T ss_dssp CCT--TCCCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCGG
T ss_pred hcc--CCCCCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHhCHHHHHHHhcCHH
Confidence 532 245799999999999999999999999999999999999999999999974
No 53
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus subtilis} SCOP: a.104.1.0 PDB: 3ejd_B* 3eje_B*
Probab=99.97 E-value=5.1e-30 Score=244.12 Aligned_cols=248 Identities=15% Similarity=0.190 Sum_probs=186.2
Q ss_pred CchHHHHHHHHHHhCCceEEecCCccEEEeCCHHHHHHHHHhCCCccCCCCCccccc---c-cccCCCceeeCCCCchHH
Q 045796 68 TDLYKSLTKLADAYGPIYKFWLANKLFVVVSSSSIAKEMVRDKDTIFSNRQTTVATL---T-PTLGGNDIVFSPYGAQWR 143 (378)
Q Consensus 68 ~~~~~~~~~~~~~yG~i~~~~~g~~~~v~v~dpe~i~~vl~~~~~~f~~r~~~~~~~---~-~~~~~~~~~~~~~g~~w~ 143 (378)
.+++..+.+| ++||||+++++|+.+.++++||+.+++||.++ ..|++++...... . ....+.++ +..+|+.|+
T Consensus 13 ~~p~~~~~~~-r~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~g~~h~ 89 (404)
T 3ejb_B 13 KNPYSFYDTL-RAVHPIYKGSFLKYPGWYVTGYEETAAILKDA-RFKVRTPLPESSTKYQDLSHVQNQMM-LFQNQPDHR 89 (404)
T ss_dssp HCHHHHHHHH-HHHCSEEEEEETTEEEEEECCHHHHHHHHHCT-TEECCCSSCTTCCTTHHHHHHHHTSG-GGCCTTHHH
T ss_pred cCchHHHHHH-HhhCCEeeccCCCCCEEEEecHHHHHHHHhCc-ccccCcccccccccccchhhhhhcch-hhcCCchHH
Confidence 4678888888 68999999999999999999999999999876 5677665422110 0 01113344 556799999
Q ss_pred HHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHhccCCCCcchH-HhHHHHHHHHHHHHHhcCCCCCCCCcchhHHHH
Q 045796 144 RLRKAMVGEMMTNSSLDSCSALRKQVLKNTIRDLYNNKIGKPVDIG-ELSVSTSVNALENMLWGGGTGSGAHKDHTLEMK 222 (378)
Q Consensus 144 ~~Rk~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~d~~-~~~~~~t~dii~~~~fG~~~~~~~~~~~~~~~~ 222 (378)
++||++. ++|++++++.+.+.++++++++++.|.. ++++|+. +....+++++++.+ ||.+.+ ....+.
T Consensus 90 ~~Rr~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~---~~~~d~~~~~~~~~~~~vi~~~-~G~~~~------~~~~~~ 158 (404)
T 3ejb_B 90 RLRTLAS-GAFTPRTTESYQPYIIETVHHLLDQVQG---KKKMEVISDFAFPLASFVIANI-IGVPEE------DREQLK 158 (404)
T ss_dssp HHHHHHH-GGGSHHHHHTTHHHHHHHHHHHHHTTTT---TSEEEHHHHTHHHHHHHHHHHH-HTCCGG------GHHHHH
T ss_pred HHHHHHH-hhcCHHHHHHHHHHHHHHHHHHHHHhhh---cCCcchHHHHHHHHHHHHHHHH-cCCCHH------HHHHHH
Confidence 9999985 8999999999999999999999999874 5678975 45567999999995 897652 123344
Q ss_pred HHHHHHHHHhCCCCcccccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCCCCCCCCcHHHHHHhcccc
Q 045796 223 QLLDDIMELQGVPNISDIFPVLSRFDLQGVERKCKEIALWVEKIFNSAIEKRKNLIAKGTLKFDGRNKDFLQTFIEMLDS 302 (378)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~~~~~dll~~ll~~~~~ 302 (378)
+....+..... .|+. ....++..+..+.+.+++.+.++++++. ...|+++.|+ ...
T Consensus 159 ~~~~~~~~~~~-------~p~~-----~~~~~~~~~~~~~~~~~~~~~i~~r~~~----------~~~d~l~~ll-~~~- 214 (404)
T 3ejb_B 159 EWAASLIQTID-------FTRS-----RKALTEGNIMAVQAMAYFKELIQKRKRH----------PQQDMISMLL-KGR- 214 (404)
T ss_dssp HHHHHHHGGGS-------TTCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHS----------CCSSHHHHHH-HC--
T ss_pred HHHHHHHHhcc-------CCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHhC----------CcchHHHHHH-hcc-
Confidence 44443332211 1211 1123455566677888888888887642 2479999999 432
Q ss_pred CCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcCchHHHHHHHHHH
Q 045796 303 EDSSISLNRTELIALLLDIILGGTDTTTTIMEWTLTKLLQFPVEMKKVQAELA 355 (378)
Q Consensus 303 ~~~~~~l~~~ei~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~iq~kl~~Ei~ 355 (378)
++..++++++++++.++++||+|||+++|+|++++|++||++|+|+++|++
T Consensus 215 --~~~~ls~~el~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~ 265 (404)
T 3ejb_B 215 --EKDKLTEEEAASTCILLAIAGHETTVNLISNSVLCLLQHPEQLLKLRENPD 265 (404)
T ss_dssp -----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCGG
T ss_pred --cCCCCCHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHCHHHHHHHHhCHH
Confidence 245799999999999999999999999999999999999999999999985
No 54
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A {Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A* 1pkf_A*
Probab=99.97 E-value=5e-30 Score=245.32 Aligned_cols=249 Identities=17% Similarity=0.228 Sum_probs=189.3
Q ss_pred CCchHHHHHHHHHHhCCceEEecCCccEEEeCCHHHHHHHHHhCCCccCCCCC-----cc-c--ccccccC-CCceeeCC
Q 045796 67 GTDLYKSLTKLADAYGPIYKFWLANKLFVVVSSSSIAKEMVRDKDTIFSNRQT-----TV-A--TLTPTLG-GNDIVFSP 137 (378)
Q Consensus 67 ~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~v~dpe~i~~vl~~~~~~f~~r~~-----~~-~--~~~~~~~-~~~~~~~~ 137 (378)
..+++..+.+| ++||||++ + ++.+.++|+||+.+++||.++. |++++. .. . ....... +.+ ++..
T Consensus 25 ~~~p~~~~~~l-~~~Gpv~~-~-~~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~ 98 (419)
T 1q5d_A 25 AEDPFPAIERL-REATPIFY-W-DEGRSWVLTRYHDVSAVFRDER--FAVSREEWESSAEYSSAIPELSDMKKYG-LFGL 98 (419)
T ss_dssp TTCCHHHHHHH-HHHCSEEE-E-TTTTEEEECSHHHHHHHHTCTT--EECCGGGSTTHHHHHHSSGGGHHHHHHS-TTTS
T ss_pred hhChHHHHHHH-HhhCCccc-c-CCCCEEEEecHHHHHHHHcCCC--ccccccccccccccccccchhhhhcccc-cccC
Confidence 45678889998 78999999 6 6778999999999999998764 887761 11 1 1111100 223 3455
Q ss_pred CCchHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHhccCCCCcchHHh-HHHHHHHHHHHHHhcCCCCCCCCcc
Q 045796 138 YGAQWRRLRKAMVGEMMTNSSLDSCSALRKQVLKNTIRDLYNNKIGKPVDIGEL-SVSTSVNALENMLWGGGTGSGAHKD 216 (378)
Q Consensus 138 ~g~~w~~~Rk~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~d~~~~-~~~~t~dii~~~~fG~~~~~~~~~~ 216 (378)
+|+.|+++||++. ++|+++.++.+.+.++++++++++.|.. ++++|+... ...+++|+|+.+ ||.+.+
T Consensus 99 ~g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~---~~~~d~~~~~~~~~~~~vi~~~-fG~~~~------ 167 (419)
T 1q5d_A 99 PPEDHARVRKLVN-PSFTSRAIDLLRAEIQRTVDQLLDARSG---QEEFDVVRDYAEGIPMRAISAL-LKVPAE------ 167 (419)
T ss_dssp CHHHHHHHHHHHG-GGGSHHHHGGGHHHHHHHHHHHHHHHTT---SSCEETTTTTGGGSHHHHHHHH-TTCCGG------
T ss_pred CchHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHH-hCCCHH------
Confidence 7999999999985 8999999999999999999999999975 347998764 489999999998 998762
Q ss_pred hhHHHHHHHHHHHHHhCCCCcccccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCCCCCCCC-cHHHH
Q 045796 217 HTLEMKQLLDDIMELQGVPNISDIFPVLSRFDLQGVERKCKEIALWVEKIFNSAIEKRKNLIAKGTLKFDGRNK-DFLQT 295 (378)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~~~~~-dll~~ 295 (378)
....+.+....++..... ..+|+. ....++.......+.+++.++|+++++. . .. |+++.
T Consensus 168 ~~~~~~~~~~~~~~~~~~----~~~P~~-----~~~~~~~~~~~~~~~~~~~~~i~~r~~~--------~--~~~dll~~ 228 (419)
T 1q5d_A 168 CDEKFRRFGSATARALGV----GLVPRV-----DEETKTLVASVTEGLALLHGVLDERRRN--------P--LENDVLTM 228 (419)
T ss_dssp GHHHHHHHHHHHHHHTTT----TTSSCC-----CSCHHHHHHHHHHHHHHHHHHHHHHHHS--------C--CSSCHHHH
T ss_pred HHHHHHHHHHHHHHhccc----ccccCC-----hHHHHHHHHHHHHHHHHHHHHHHHHHhC--------C--CCCCHHHH
Confidence 123455555555443221 123332 1123455666777888888898887652 1 24 99999
Q ss_pred HHhccccCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcCchHHHHHHHHH
Q 045796 296 FIEMLDSEDSSISLNRTELIALLLDIILGGTDTTTTIMEWTLTKLLQFPVEMKKVQAEL 354 (378)
Q Consensus 296 ll~~~~~~~~~~~l~~~ei~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~iq~kl~~Ei 354 (378)
|++..++ +..+++++|++++.++++||+|||+++|+|++++|++||++|+|+++|+
T Consensus 229 ll~~~~~---~~~l~~~ei~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~ 284 (419)
T 1q5d_A 229 LLQAEAD---GSRLSTKELVALVGAIIAAGTDTTIYLIAFAVLNLLRSPEALELVKAEP 284 (419)
T ss_dssp HHHHHHS---STTCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHCHHHHHHHHHCG
T ss_pred HHhhhcc---CCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHhCH
Confidence 9987532 4579999999999999999999999999999999999999999999996
No 55
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin, oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A* 1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A*
Probab=99.97 E-value=4.1e-30 Score=244.73 Aligned_cols=244 Identities=16% Similarity=0.178 Sum_probs=187.9
Q ss_pred CCchHHHHHHHHHHhCCceEEecCCccEEEeCCHHHHHHHHHhCCCccCCCCCc--c----ccc---cc-c----cCCCc
Q 045796 67 GTDLYKSLTKLADAYGPIYKFWLANKLFVVVSSSSIAKEMVRDKDTIFSNRQTT--V----ATL---TP-T----LGGND 132 (378)
Q Consensus 67 ~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~v~dpe~i~~vl~~~~~~f~~r~~~--~----~~~---~~-~----~~~~~ 132 (378)
..+++..+.+| ++||||+++++|+.+.++++||+.+++||.++ .|++++.. . ... .. . ..+.+
T Consensus 13 ~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (404)
T 1z8o_A 13 HVDWYRTYAEL-RETAPVTPVRFLGQDAWLVTGYDEAKAALSDL--RLSSDPKKKYPGVEVEFPAYLGFPEDVRNYFATN 89 (404)
T ss_dssp TSSHHHHHHHH-HHHCSEEEEEETTEEEEEECSHHHHHHHHHCT--TEECCTTCCCTTCCCCCGGGTTCCHHHHHHHSSS
T ss_pred ccCcHHHHHHH-HhcCCeeeecCCCceEEEEcCHHHHHHHHcCC--Cccccccccccccccccccccccccchhhhcccc
Confidence 35788999999 99999999999999999999999999999876 57776542 1 100 11 0 01344
Q ss_pred eeeCCCCchHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHhccCCCCcchHHhH-HHHHHHHHHHHHhcCCCCC
Q 045796 133 IVFSPYGAQWRRLRKAMVGEMMTNSSLDSCSALRKQVLKNTIRDLYNNKIGKPVDIGELS-VSTSVNALENMLWGGGTGS 211 (378)
Q Consensus 133 ~~~~~~g~~w~~~Rk~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~d~~~~~-~~~t~dii~~~~fG~~~~~ 211 (378)
+ +..+|+.|+++||++. ++|+++.++.+.+.++++++++++.|.. ++++|+...+ ..+++|+++.+ ||.+. .
T Consensus 90 l-~~~~g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~---~~~~d~~~~~~~~~~~~vi~~~-~G~~~-~ 162 (404)
T 1z8o_A 90 M-GTSDPPTHTRLRKLVS-QEFTVRRVEAMRPRVEQITAELLDEVGD---SGVVDIVDRFAHPLPIKVICEL-LGVDE-K 162 (404)
T ss_dssp G-GGCCTTHHHHHHHHHH-TTSCHHHHHHTHHHHHHHHHHHHHTSCS---SSEEEHHHHTTTHHHHHHHHHH-TTCCG-G
T ss_pred c-ccCCCcHHHHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHhhhh---cCCcchHHHHhHHHHHHHHHHH-hCCCH-H
Confidence 4 4557999999999985 8999999999999999999999998863 5689998655 68999999985 99876 2
Q ss_pred CCCcchhHHHHHHHHHHHHHhCCCCcccccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCCCCCCCCc
Q 045796 212 GAHKDHTLEMKQLLDDIMELQGVPNISDIFPVLSRFDLQGVERKCKEIALWVEKIFNSAIEKRKNLIAKGTLKFDGRNKD 291 (378)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~~~~~d 291 (378)
.. ..+.+.+..++. . . .| . .++.......+.+++.+.|+++++. . ..|
T Consensus 163 ~~-----~~~~~~~~~~~~--~--~----~p--------~-~~~~~~~~~~~~~~~~~~i~~r~~~--------~--~~d 210 (404)
T 1z8o_A 163 YR-----GEFGRWSSEILV--M--D----PE--------R-AEQRGQAAREVVNFILDLVERRRTE--------P--GDD 210 (404)
T ss_dssp GT-----TTHHHHHHHHHC--C--C----GG--------G-HHHHHHHHHHHHHHHHHHHHHHHHS--------C--CSS
T ss_pred HH-----HHHHHHHHHHhc--c--C----Ch--------h-HHHHHHHHHHHHHHHHHHHHHHHhC--------C--CCC
Confidence 21 224444433322 0 0 11 1 2445556677888888888887652 1 369
Q ss_pred HHHHHHhc-cccCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcCchHHHHHHHHHH
Q 045796 292 FLQTFIEM-LDSEDSSISLNRTELIALLLDIILGGTDTTTTIMEWTLTKLLQFPVEMKKVQAELA 355 (378)
Q Consensus 292 ll~~ll~~-~~~~~~~~~l~~~ei~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~iq~kl~~Ei~ 355 (378)
+++.|++. .++ +..++++||.+++.++++||+|||+++|+|++++|++||++|+|+++|++
T Consensus 211 ll~~ll~~~~~~---~~~l~~~ei~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~ 272 (404)
T 1z8o_A 211 LLSALIRVQDDD---DGRLSADELTSIALVLLLAGFEASVSLIGIGTYLLLTHPDQLALVRRDPS 272 (404)
T ss_dssp HHHHHHHCEETT---TEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG
T ss_pred HHHHHHhhhccc---CCCCCHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHCHHHHHHHHhCHH
Confidence 99999987 432 34699999999999999999999999999999999999999999999974
No 56
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB: 2z3u_A* 3a1l_A*
Probab=99.97 E-value=1.4e-29 Score=242.56 Aligned_cols=249 Identities=11% Similarity=0.113 Sum_probs=182.1
Q ss_pred CchHHHHHHHHHHhCCceEEecC--CccEEEeCCHHHHHHHHHhCCCccCCCCCc-------c--ccc-----ccccCCC
Q 045796 68 TDLYKSLTKLADAYGPIYKFWLA--NKLFVVVSSSSIAKEMVRDKDTIFSNRQTT-------V--ATL-----TPTLGGN 131 (378)
Q Consensus 68 ~~~~~~~~~~~~~yG~i~~~~~g--~~~~v~v~dpe~i~~vl~~~~~~f~~r~~~-------~--~~~-----~~~~~~~ 131 (378)
.+++..+.+++ +||||+++++| +.+.++|+||+.+++||.++ .|++++.. . ... ....++.
T Consensus 20 ~~p~~~~~~l~-~~Gpv~~~~~g~~~~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (425)
T 2z3t_A 20 ADPYPVYRRYR-EAAPVHRTASGPGKPDTYYVFTYDDVVRVLSNR--RLGRNARVASGDTDTAPVPIPTEHRALRTVVEN 96 (425)
T ss_dssp HCCHHHHHHHH-HHCSEEEECCCSSCCCEEEECSHHHHHHHHHCT--TEESSCCCC---------------CHHHHHHTT
T ss_pred cChHHHHHHHH-hcCCeEeccccCCCCCeEEEcCHHHHHHHHcCC--Ccccccccccccccccccccccccccccccccc
Confidence 35688888886 59999999987 77899999999999999875 68777531 1 000 0011124
Q ss_pred ceeeCCCCchHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHhccCCCCcchHHh-HHHHHHHHHHHHHhcCCCC
Q 045796 132 DIVFSPYGAQWRRLRKAMVGEMMTNSSLDSCSALRKQVLKNTIRDLYNNKIGKPVDIGEL-SVSTSVNALENMLWGGGTG 210 (378)
Q Consensus 132 ~~~~~~~g~~w~~~Rk~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~d~~~~-~~~~t~dii~~~~fG~~~~ 210 (378)
++++ .+|+.|+++||++. ++|+++.++.+.+.+++.++++++.|.. ++++|+... ...+++|+++.+ ||.+.+
T Consensus 97 ~l~~-~dg~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~---~g~~dl~~~~~~~~~~~vi~~~-~G~~~~ 170 (425)
T 2z3t_A 97 WLVF-LDPPHHTELRSLLT-TEFSPSIVTGLRPRIAELASALLDRLRA---QRRPDLVEGFAAPLPILVISAL-LGIPEE 170 (425)
T ss_dssp CGGG-CCHHHHHHHHHHHH-GGGSHHHHHHHHHHHHHHHHHHHHHHTT---SSSCBHHHHTTTHHHHHHHHHH-HTCCGG
T ss_pred cccc-CCchHHHHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHHHHh---cCCccHHHHHHHHHHHHHHHHH-hCCCHH
Confidence 4444 46999999999985 8999999999999999999999999975 237999775 478999999998 998762
Q ss_pred CCCCcchhHHHHHHHHHHHHHhCCCCcccccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCCCCCCCC
Q 045796 211 SGAHKDHTLEMKQLLDDIMELQGVPNISDIFPVLSRFDLQGVERKCKEIALWVEKIFNSAIEKRKNLIAKGTLKFDGRNK 290 (378)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~~~~~ 290 (378)
....+.+....+.... ..+| ++ ....++..+..+.+.+++.++|+++++. ...
T Consensus 171 ------~~~~~~~~~~~~~~~~------~~~~----~~-~~~~~~~~~~~~~~~~~~~~~i~~r~~~----------~~~ 223 (425)
T 2z3t_A 171 ------DHTWLRANAVALQEAS------TTRA----RD-GRGYARAEAASQEFTRYFRREVDRRGGD----------DRD 223 (425)
T ss_dssp ------GHHHHHHHHHHHHTTC------TTCC----C----HHHHHHHHHHHHHHHHHHHHCC-----------------
T ss_pred ------HHHHHHHHHHHHHhhc------cccC----CC-HHHHHHHHHHHHHHHHHHHHHHHHHHhC----------CCC
Confidence 1234444444333211 1112 11 1123445555666777777777666532 247
Q ss_pred cHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcCchHHHHHHHHHH
Q 045796 291 DFLQTFIEMLDSEDSSISLNRTELIALLLDIILGGTDTTTTIMEWTLTKLLQFPVEMKKVQAELA 355 (378)
Q Consensus 291 dll~~ll~~~~~~~~~~~l~~~ei~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~iq~kl~~Ei~ 355 (378)
|+++.|++...+ +..+++++|++++.++++||+|||+++|+|++++|++||++|+|+|+|++
T Consensus 224 dll~~ll~~~~~---~~~ls~~el~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~ 285 (425)
T 2z3t_A 224 DLLTLLVRARDT---GSPLSVDGIVGTCVHLLTAGHETTTNFLAKAVLTLRAHRDVLDELRTTPE 285 (425)
T ss_dssp CHHHHHHHHHHT---TCCCCHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHCHHHHHHHHHCGG
T ss_pred CHHHHHHHhhcc---CCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhChH
Confidence 999999987542 45799999999999999999999999999999999999999999999974
No 57
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide antibiotics, 12- and 14- carbon macrolactone monooxygenase, heme; HET: HEM; 1.92A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=99.97 E-value=1.4e-29 Score=241.64 Aligned_cols=244 Identities=17% Similarity=0.208 Sum_probs=185.8
Q ss_pred CCCchHHHHHHHHHHhCCceEEec-CCccEEEeCCHHHHHHHHHhCCCccCCCCC-cccc--ccccc--------C-CCc
Q 045796 66 LGTDLYKSLTKLADAYGPIYKFWL-ANKLFVVVSSSSIAKEMVRDKDTIFSNRQT-TVAT--LTPTL--------G-GND 132 (378)
Q Consensus 66 l~~~~~~~~~~~~~~yG~i~~~~~-g~~~~v~v~dpe~i~~vl~~~~~~f~~r~~-~~~~--~~~~~--------~-~~~ 132 (378)
+..+++..+.+| ++||||+++++ |+.+.++++||+++++||.++. +++++. .... ..... . +.+
T Consensus 15 ~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (411)
T 1gwi_A 15 FVTDLDGESARL-RAAGPLAAVELPGGVPVWAVTHHAEAKALLTDPR--LVKDINVWGAWRRGEIPADWPLIGLANPGRS 91 (411)
T ss_dssp TCSCHHHHHHHH-HHTCSEEEEEETTTEEEEEECSHHHHHHHHTCTT--EECCGGGCHHHHTTCSCTTCTTHHHHSCCSS
T ss_pred ccCChHHHHHHH-HHhCCeeeeecCCCccEEEEeCHHHHHHHHcCCc--cccCcccccccccccCCcccchhhhhccccc
Confidence 445788899999 99999999997 8899999999999999998753 443331 1100 00000 1 233
Q ss_pred eeeCCCCchHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHhccCCCCcchHHhHH-HHHHHHHHHHHhcCCCCC
Q 045796 133 IVFSPYGAQWRRLRKAMVGEMMTNSSLDSCSALRKQVLKNTIRDLYNNKIGKPVDIGELSV-STSVNALENMLWGGGTGS 211 (378)
Q Consensus 133 ~~~~~~g~~w~~~Rk~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~d~~~~~~-~~t~dii~~~~fG~~~~~ 211 (378)
++..+|+.|+++||++. ++|++++++.+.+.++++++++++.|.+ +++++|+...+. .+++|+++. +||.+. .
T Consensus 92 -l~~~~g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~--~~~~~d~~~~~~~~~~~~vi~~-~~G~~~-~ 165 (411)
T 1gwi_A 92 -MLTVDGAEHRRLRTLVA-QALTVRRVEHMRGRITELTDRLLDELPA--DGGVVDLKAAFAYPLPMYVVAD-LMGIEE-A 165 (411)
T ss_dssp -GGGCCHHHHHHHHHHHT-TTSCHHHHHTTHHHHHHHHHHHHHTSCC--SCCCEEHHHHTTTHHHHHHHHH-HHTCCG-G
T ss_pred -cccCCcHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHHHHHHHH--cCCCcchHHHHhhHHHHHHHHH-HhCCCH-H
Confidence 45567999999999985 8999999999999999999999998863 256899988776 599999996 799775 2
Q ss_pred CCCcchhHHHHHHHHHHHHHhCCCCcccccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCCCCCCCCc
Q 045796 212 GAHKDHTLEMKQLLDDIMELQGVPNISDIFPVLSRFDLQGVERKCKEIALWVEKIFNSAIEKRKNLIAKGTLKFDGRNKD 291 (378)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~~~~~d 291 (378)
...++.+.+..++.. . . ..++..+..+.+.+++.++|+++++. + ..|
T Consensus 166 -----~~~~~~~~~~~~~~~----~----------~----~~~~~~~~~~~~~~~~~~~i~~r~~~--------~--~~d 212 (411)
T 1gwi_A 166 -----RLPRLKVLFEKFFST----Q----------T----PPEEVVATLTELASIMTDTVAAKRAA--------P--GDD 212 (411)
T ss_dssp -----GHHHHHHHHHHHHCT----T----------S----CHHHHHHHHHHHHHHHHHHHHHHHHS--------C--CSS
T ss_pred -----HHHHHHHHHHHHhcc----C----------C----ChHHHHHHHHHHHHHHHHHHHHHHhC--------C--CCC
Confidence 123444444433220 0 0 01344556667888888888887652 1 379
Q ss_pred HHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcCchHHHHHHHHH
Q 045796 292 FLQTFIEMLDSEDSSISLNRTELIALLLDIILGGTDTTTTIMEWTLTKLLQFPVEMKKVQAEL 354 (378)
Q Consensus 292 ll~~ll~~~~~~~~~~~l~~~ei~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~iq~kl~~Ei 354 (378)
+++.|++..++ +..+++++|++++.++++||+|||+++|+|++++|++||++|+|+++|+
T Consensus 213 ~l~~ll~~~~~---~~~l~~~~i~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~ 272 (411)
T 1gwi_A 213 LTSALIQASEN---GDHLTDAEIVSTLQLMVAAGHETTISLIVNAVVNLSTHPEQRALVLSGE 272 (411)
T ss_dssp HHHHHHHCCBT---TBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTTS
T ss_pred HHHHHHHhccc---CCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhChHHHHHHHcCh
Confidence 99999987542 4569999999999999999999999999999999999999999999984
No 58
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A {Streptomyces natalensis} PDB: 2x9p_A*
Probab=99.97 E-value=4.5e-29 Score=237.41 Aligned_cols=237 Identities=14% Similarity=0.168 Sum_probs=181.7
Q ss_pred CchHHHHHHHHHHhCCceEEec-CCccEEEeCCHHHHHHHHHhCCCccCCCCCccc-ccccccCCCce-eeCCCC-----
Q 045796 68 TDLYKSLTKLADAYGPIYKFWL-ANKLFVVVSSSSIAKEMVRDKDTIFSNRQTTVA-TLTPTLGGNDI-VFSPYG----- 139 (378)
Q Consensus 68 ~~~~~~~~~~~~~yG~i~~~~~-g~~~~v~v~dpe~i~~vl~~~~~~f~~r~~~~~-~~~~~~~~~~~-~~~~~g----- 139 (378)
.+++..+.+| ++||||+++++ |+.+.++|+||+.+++||.++ .|++++.... ..... .+.+. ++..+|
T Consensus 26 ~~p~~~~~~l-~~yGpv~~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~-~~~~~~l~~~~g~~~~~ 101 (404)
T 2xbk_A 26 LKLSPLLRAL-QDRGPIHRVRTPAGDEAWLVTRHAELKQLLHDE--RIGRTHPDPPSAAQYV-RSPFLDLLISDADAESG 101 (404)
T ss_dssp TBCCHHHHHH-HHHCSEEEEECTTSCEEEEECSHHHHHHHTTCT--TEESBCSSGGGSCCSS-CCHHHHTTCBCSCHHHH
T ss_pred cCccHHHHHH-HhhCCEeeeccCCCceEEEEcCHHHHHHHHcCC--CCCCCccccccCCccc-ccccccceeeCCCCCCC
Confidence 4678889999 89999999996 889999999999999999875 4766554321 11111 13331 455679
Q ss_pred -chHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHhccCCCCcchHHhH-HHHHHHHHHHHHhcCCCCCCCCcch
Q 045796 140 -AQWRRLRKAMVGEMMTNSSLDSCSALRKQVLKNTIRDLYNNKIGKPVDIGELS-VSTSVNALENMLWGGGTGSGAHKDH 217 (378)
Q Consensus 140 -~~w~~~Rk~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~d~~~~~-~~~t~dii~~~~fG~~~~~~~~~~~ 217 (378)
+.|+++||++. ++|+++.++.+.+.++++++++++.|.. .|+++|+...+ ..+++++++. +||.+. . .
T Consensus 102 ~~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~--~g~~~d~~~~~~~~~~~~vi~~-~~G~~~-~-----~ 171 (404)
T 2xbk_A 102 RRQHAETRRLLT-PLFSARRVLEMQPKVEEAADTLLDAFIA--QGPPGDLHGELTVPFALTVLCE-VIGVPP-Q-----R 171 (404)
T ss_dssp HHHHHHHHHHHG-GGGCHHHHHHHHHHHHHHHHHHHHHHHH--TCSSEEHHHHTHHHHHHHHHHH-HHTCCG-G-----G
T ss_pred CchHHHHHHHhh-hhcCHHHHHHHHHHHHHHHHHHHHHHHh--cCCCeeHHHHHHHHHHHHHHHH-HhCCCH-H-----H
Confidence 99999999985 8999999999999999999999999985 45689998665 5799999998 799776 2 1
Q ss_pred hHHHHHHHHHHHHHhCCCCcccccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCCCCCCCCcHHHHHH
Q 045796 218 TLEMKQLLDDIMELQGVPNISDIFPVLSRFDLQGVERKCKEIALWVEKIFNSAIEKRKNLIAKGTLKFDGRNKDFLQTFI 297 (378)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~~~~~dll~~ll 297 (378)
...+.+.+..++. . ..| + +..+..+.+.+++.++|+++++. . ..|+++.|
T Consensus 172 ~~~~~~~~~~~~~---~-----~~~--------p---~~~~~~~~~~~~~~~~i~~r~~~--------~--~~dll~~l- 221 (404)
T 2xbk_A 172 RAELTTLLAGIAK---L-----DDR--------E---GAVRAQDDLFGYVAGLVEHKRAE--------P--GPDIISRL- 221 (404)
T ss_dssp HHHHHHHHHHHTB---S-----SCH--------H---HHHHHHHHHHHHHHHHHHHHHHS--------C--CSSHHHHH-
T ss_pred HHHHHHHHHHHHh---c-----cCc--------H---HHHHHHHHHHHHHHHHHHHHHhC--------C--CCCHHHHh-
Confidence 2334443332211 0 000 0 33445567788888888887652 1 36899988
Q ss_pred hccccCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcCchHHHHHHHHHH
Q 045796 298 EMLDSEDSSISLNRTELIALLLDIILGGTDTTTTIMEWTLTKLLQFPVEMKKVQAELA 355 (378)
Q Consensus 298 ~~~~~~~~~~~l~~~ei~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~iq~kl~~Ei~ 355 (378)
+ + + .+++++|++++.++++||+|||+++|+|++++|++||++|+|+++|++
T Consensus 222 ~---~---~-~ls~~ei~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~ 272 (404)
T 2xbk_A 222 N---D---G-ELTEDRVAHLAMGLLFAGLDSVASIMDNGVVLLAAHPDQRAAALADPD 272 (404)
T ss_dssp H---S---S-SCCHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHCHHHHHHHHHCHH
T ss_pred h---c---C-CCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHhCHH
Confidence 2 2 3 799999999999999999999999999999999999999999999975
No 59
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A*
Probab=99.97 E-value=5.8e-30 Score=246.34 Aligned_cols=246 Identities=14% Similarity=0.192 Sum_probs=172.4
Q ss_pred chHHHHHHHHHHhCCceEEecCCccEEEeCCHHHHHHHHHhCCCccCCCCCcccccccccCCCceeeCCCCchHHHHHHH
Q 045796 69 DLYKSLTKLADAYGPIYKFWLANKLFVVVSSSSIAKEMVRDKDTIFSNRQTTVATLTPTLGGNDIVFSPYGAQWRRLRKA 148 (378)
Q Consensus 69 ~~~~~~~~~~~~yG~i~~~~~g~~~~v~v~dpe~i~~vl~~~~~~f~~r~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~ 148 (378)
+++..+.++ ++||||+++..++ .++|+||+.+++||.++.. |++++........ .+.+.++..+|+.|+++||+
T Consensus 54 ~p~~~~~~l-r~~gpv~~~~~~~--~~vv~~~~~v~~vl~~~~~-f~~~~~~~~~~~~--~~~~~l~~~dg~~h~~~Rr~ 127 (441)
T 3nc3_A 54 NPYAYFSQL-REEDPVHYEESID--SYFISRYHDVRYILQHPDI-FTTKSLVERAEPV--MRGPVLAQMHGKEHSAKRRI 127 (441)
T ss_dssp CGGGTHHHH-HHHCSEEEETTTT--EEEECCHHHHHHHHHCTTT-EECCCTTSCCCCS--CC-------------CCHHH
T ss_pred ChHHHHHHH-HhcCCEEEeCCCC--EEEEcCHHHHHHHhcCccc-ccccccccccccc--cCCCccccCCcHHHHHHHHH
Confidence 556667666 6899999987665 8999999999999987653 7776544332222 13334566679999999999
Q ss_pred HHHhhcCcchhhhhHHHHHHHHHHHHHHHHhccCCCCcch-HHhHHHHHHHHHHHHHhcCCCCCCCCcchhHHHHHHHHH
Q 045796 149 MVGEMMTNSSLDSCSALRKQVLKNTIRDLYNNKIGKPVDI-GELSVSTSVNALENMLWGGGTGSGAHKDHTLEMKQLLDD 227 (378)
Q Consensus 149 l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~d~-~~~~~~~t~dii~~~~fG~~~~~~~~~~~~~~~~~~~~~ 227 (378)
+. ++|+++.++.+.+.+++.++++++.|.. ++++|+ .++...+++++++. +||.+. . ....+.+....
T Consensus 128 ~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~---~~~~dl~~~~~~~~~~~vi~~-l~G~~~-~-----~~~~~~~~~~~ 196 (441)
T 3nc3_A 128 VV-RSFIGDALDHLSPLIKQNAENLLAPYLE---RGKSDLVNDFGKTFAVCVTMD-MLGLDK-R-----DHEKISEWHSG 196 (441)
T ss_dssp HH-HHHHHTHHHHHHHHHHHHHHHHHTTTTT---TTEEECCCCCHHHHHHHHHHH-HTTCCG-G-----GHHHHHHHHHH
T ss_pred HH-hhcCHHHHHHHHHHHHHHHHHHHHHHHh---cCCCcHHHHHHHHHHHHHHHH-HcCCCH-H-----HHHHHHHHHHH
Confidence 85 8999999999999999999999998874 457887 45556799999999 588765 1 23445555555
Q ss_pred HHHHhCCCCcccccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCCCCCCCCcHHHHHHhccccCCCCC
Q 045796 228 IMELQGVPNISDIFPVLSRFDLQGVERKCKEIALWVEKIFNSAIEKRKNLIAKGTLKFDGRNKDFLQTFIEMLDSEDSSI 307 (378)
Q Consensus 228 ~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~ 307 (378)
++....... .. ....+......+.+.+++.++|+++++. ...|+++.|++...+ +.
T Consensus 197 ~~~~~~~~~----------~~-~~~~~~~~~~~~~l~~~~~~~i~~rr~~----------~~~Dll~~Ll~~~~~---~~ 252 (441)
T 3nc3_A 197 VADFITSIS----------QS-PEARAHSLWCSEQLSQYLMPVIKERRVN----------PGSDLISILCTSEYE---GM 252 (441)
T ss_dssp HHHHHHCSC----------CC-HHHHHHHHHHHHHHHHHHHHHHHHHTTS----------CCSSHHHHHCC---------
T ss_pred HHHhccccc----------CC-hHHHHHHHHHHHHHHHHHHHHHHHHHhC----------CCCCHHHHHHHhhcc---CC
Confidence 544322100 00 1112444556667888888888877531 247999999987542 45
Q ss_pred CCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcCchHHHHHHHHHH
Q 045796 308 SLNRTELIALLLDIILGGTDTTTTIMEWTLTKLLQFPVEMKKVQAELA 355 (378)
Q Consensus 308 ~l~~~ei~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~iq~kl~~Ei~ 355 (378)
.++++||++++.++++||+|||+++|+|++++|++||++|+|+++|+.
T Consensus 253 ~ls~~el~~~~~~ll~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E~~ 300 (441)
T 3nc3_A 253 ALSDKDILALILNVLLAATEPADKTLALMIYHLLNNPEQMNDVLADRS 300 (441)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSHHHHHHHHHCGG
T ss_pred CCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHH
Confidence 799999999999999999999999999999999999999999999863
No 60
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase, metal-binding, oxidoreductase, hypothetical protein; HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB: 2uvn_A* 2whf_A* 2wh8_A* 2wgy_A*
Probab=99.96 E-value=2.6e-29 Score=239.91 Aligned_cols=245 Identities=13% Similarity=0.123 Sum_probs=182.5
Q ss_pred CchHHHHHHHHHHhCCce-----EEecCCccEEEeCCHHHHHHHHHhCCCccCCCCCcc-ccc--cc-c-cCCCceeeCC
Q 045796 68 TDLYKSLTKLADAYGPIY-----KFWLANKLFVVVSSSSIAKEMVRDKDTIFSNRQTTV-ATL--TP-T-LGGNDIVFSP 137 (378)
Q Consensus 68 ~~~~~~~~~~~~~yG~i~-----~~~~g~~~~v~v~dpe~i~~vl~~~~~~f~~r~~~~-~~~--~~-~-~~~~~~~~~~ 137 (378)
.+++..+.+| ++||||+ ++++ .+.++|+||+.+++||.++ ..|++++... ... .+ . ..+.++++ .
T Consensus 25 ~~p~~~~~~l-~~~Gpv~~~~~~~~~~--~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~l~~-~ 99 (414)
T 2uuq_A 25 PNPWPMYRAL-RDHDPVHHVVPPQRPE--YDYYVLSRHADVWSAARDH-QTFSSAQGLTVNYGELEMIGLHDTPPMVM-Q 99 (414)
T ss_dssp TCCHHHHHHH-HHHCSEEEECCTTCGG--GCEEEECSHHHHHHHHHCT-TTEESTTCSSSCTTHHHHHTCSSSCCGGG-C
T ss_pred cCchHHHHHH-HhcCCEEcccccccCC--CCEEEEcCHHHHHHHHcCc-hhccCCCCcccccCccccccccccccccc-C
Confidence 4678888888 4799999 8876 5799999999999999876 5687775432 111 11 1 22445544 4
Q ss_pred CCchHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHhccCCCCcchH-HhHHHHHHHHHHHHHhcCCCCCCCCcc
Q 045796 138 YGAQWRRLRKAMVGEMMTNSSLDSCSALRKQVLKNTIRDLYNNKIGKPVDIG-ELSVSTSVNALENMLWGGGTGSGAHKD 216 (378)
Q Consensus 138 ~g~~w~~~Rk~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~d~~-~~~~~~t~dii~~~~fG~~~~~~~~~~ 216 (378)
+|+.|+++||++. ++|+++.++.+.+.++++++++++.|.+ ++++|+. +++..+++|+++. +||.+. ..
T Consensus 100 ~g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~---~~~vdl~~~~~~~~~~~vi~~-~~G~~~-~~---- 169 (414)
T 2uuq_A 100 DPPVHTEFRKLVS-RGFTPRQVETVEPTVRKFVVERLEKLRA---NGGGDIVTELFKPLPSMVVAH-YLGVPE-ED---- 169 (414)
T ss_dssp CTTHHHHHHHHHH-TTSSHHHHHHHHHHHHHHHHHHHHHHHH---TTEEEHHHHTTTHHHHHHHHH-HTTCCG-GG----
T ss_pred CchhHHHHHHHhh-hhcCHHHHHHHHHHHHHHHHHHHHHHHh---cCCccHHHHHHHHhHHHHHHH-HhCCCH-HH----
Confidence 7999999999985 8999999999999999999999999986 2469996 5678999999999 689876 21
Q ss_pred hhHHHHHHHHHHHHHhCCCCccccc-ccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCCCCCCCCcHHHH
Q 045796 217 HTLEMKQLLDDIMELQGVPNISDIF-PVLSRFDLQGVERKCKEIALWVEKIFNSAIEKRKNLIAKGTLKFDGRNKDFLQT 295 (378)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~-P~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~~~~~dll~~ 295 (378)
..++.+....++.. .++ |.. ++..+....+.+++.++|+++++. ...|+++.
T Consensus 170 -~~~~~~~~~~~~~~-------~~~~p~~---------~~~~~~~~~~~~~~~~~i~~r~~~----------~~~dll~~ 222 (414)
T 2uuq_A 170 -WTQFDGWTQAIVAA-------NAVDGAT---------TGALDAVGSMMAYFTGLIERRRTE----------PADDAISH 222 (414)
T ss_dssp -HHHHHHHHHHHHHH-------HHC--------------CCHHHHHHHHHHHHHHHHHHTTS----------CCSSHHHH
T ss_pred -HHHHHHHHHHHHhh-------cccCCch---------hHHHHHHHHHHHHHHHHHHHHHhC----------CCCCHHHH
Confidence 23444444444331 012 221 111234456777788888776431 24799999
Q ss_pred HHhccccCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcCchHHHHHHHHHH
Q 045796 296 FIEMLDSEDSSISLNRTELIALLLDIILGGTDTTTTIMEWTLTKLLQFPVEMKKVQAELA 355 (378)
Q Consensus 296 ll~~~~~~~~~~~l~~~ei~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~iq~kl~~Ei~ 355 (378)
|++...+ +++..+++++|++++.++++||+|||+++|+|++++|++||++|+|+++|++
T Consensus 223 ll~~~~~-~~~~~ls~~ei~~~~~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~E~~ 281 (414)
T 2uuq_A 223 LVAAGVG-ADGDTAGTLSILAFTFTMVTGGNDTVTGMLGGSMPLLHRRPDQRRLLLDDPE 281 (414)
T ss_dssp HHHTTTT-CTTCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCGG
T ss_pred HHhcccc-cCCCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHhCHH
Confidence 9987531 1234689999999999999999999999999999999999999999999974
No 61
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12; 1.89A {Mycobacterium smegmatis} PDB: 3r9c_A*
Probab=99.96 E-value=1.4e-29 Score=242.05 Aligned_cols=251 Identities=15% Similarity=0.201 Sum_probs=183.9
Q ss_pred CCchHHHHHHHHHHhCCceEEecCCccEEEeCCHHHHHHHHHhCCCccCCCCCcccccccc--------cCCCceeeCCC
Q 045796 67 GTDLYKSLTKLADAYGPIYKFWLANKLFVVVSSSSIAKEMVRDKDTIFSNRQTTVATLTPT--------LGGNDIVFSPY 138 (378)
Q Consensus 67 ~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~v~dpe~i~~vl~~~~~~f~~r~~~~~~~~~~--------~~~~~~~~~~~ 138 (378)
..+++..+.+| ++||||+++++| .++|+||+.+++||.+. ..+++++......... ..+.+ ++..+
T Consensus 28 ~~~p~~~~~~l-r~~gpv~~~~~g---~~vv~~~~~v~~vl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~d 101 (418)
T 3r9b_A 28 RADPYPIYDRI-RRGGPLALPEAN---LAVFSSFSDCDDVLRHP-SSCSDRTKSTIFQRQLAAETQPRPQGPAS-FLFLD 101 (418)
T ss_dssp TTCCHHHHHHH-HHHCCEEEGGGT---EEEECSHHHHHHHHHCT-TEECCGGGCHHHHHHHC---------CCC-GGGCC
T ss_pred ccCchHHHHHH-HhcCCEEECCCC---eEEEecHHHHHHHHcCc-ccccCcccccccccccccccccccccccc-hhhcC
Confidence 45778888888 688999998776 89999999999999764 3445554322111100 12334 44556
Q ss_pred CchHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHhccCCCCcchHH-hHHHHHHHHHHHHHhcCCCCCCCCcch
Q 045796 139 GAQWRRLRKAMVGEMMTNSSLDSCSALRKQVLKNTIRDLYNNKIGKPVDIGE-LSVSTSVNALENMLWGGGTGSGAHKDH 217 (378)
Q Consensus 139 g~~w~~~Rk~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~d~~~-~~~~~t~dii~~~~fG~~~~~~~~~~~ 217 (378)
|+.|+++||++. ++|+++.++.+.+.++++++++++ +.. ++++|+.. +...++++++++ +||.+.+ .
T Consensus 102 g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~-l~~---~~~~d~~~~~~~~~~~~vi~~-~~G~~~~------~ 169 (418)
T 3r9b_A 102 PPDHTRLRGLVS-KAFAPRVIKRLEPEITALVDQLLD-AVD---GPEFNLIDNLAYPLPVAVICR-LLGVPIE------D 169 (418)
T ss_dssp TTHHHHHHHHHH-GGGSHHHHGGGHHHHHHHHHHHHH-TCC---SSEEEHHHHTTTHHHHHHHHH-HHTCCGG------G
T ss_pred CchHHHHHHHhh-hhhCHHHHHHHHHHHHHHHHHHHh-hhc---cCCeehHHHHhCcCCHHHHHH-HcCCCHH------H
Confidence 999999999986 899999999999999999999999 753 45889754 456899999999 8997762 1
Q ss_pred hHHHHHHHHHHHHHhCCCCcccccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCCCCCCCCcHHHHHH
Q 045796 218 TLEMKQLLDDIMELQGVPNISDIFPVLSRFDLQGVERKCKEIALWVEKIFNSAIEKRKNLIAKGTLKFDGRNKDFLQTFI 297 (378)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~~~~~dll~~ll 297 (378)
...+.+....+..... .++.+.+++ ....++..+..+.+.+++.++++++++. ...|+++.|+
T Consensus 170 ~~~~~~~~~~~~~~~~------~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~i~~r~~~----------~~~d~l~~ll 232 (418)
T 3r9b_A 170 EPKFSRASALLAAALD------PFLALTGET-SDLFDEQMKAGMWLRDYLRALIDERRRT----------PGEDLMSGLV 232 (418)
T ss_dssp HHHHHHHHHHHHHTTS------CHHHHHSSC-CTTHHHHHHHHHHHHHHHHHHHHHTTTS----------CCSSHHHHHH
T ss_pred HHHHHHHHHHHHhhcC------ccccccccC-HHHHHHHHHHHHHHHHHHHHHHHHHHhC----------CCccHHHHHH
Confidence 2334444444333211 111111122 1223556666777888888888776431 2579999999
Q ss_pred hccccCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcCchHHHHHHHHHH
Q 045796 298 EMLDSEDSSISLNRTELIALLLDIILGGTDTTTTIMEWTLTKLLQFPVEMKKVQAELA 355 (378)
Q Consensus 298 ~~~~~~~~~~~l~~~ei~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~iq~kl~~Ei~ 355 (378)
+...+ +..++++||++++.++++||+|||+++|+|++++|++||++|+|+++|++
T Consensus 233 ~~~~~---~~~ls~~ei~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E~~ 287 (418)
T 3r9b_A 233 AVEES---GDQLTEDEIIATCNLLLIAGHETTVNLIANAALAMLRTPGQWAALAADGS 287 (418)
T ss_dssp HHHHH---SSSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHSTTHHHHHHHCGG
T ss_pred Hhhhc---cCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCHHHHHHHHhChH
Confidence 87432 45699999999999999999999999999999999999999999999975
No 62
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} SCOP: a.104.1.0 PDB: 3lxi_A*
Probab=99.96 E-value=3.4e-29 Score=239.67 Aligned_cols=249 Identities=13% Similarity=0.145 Sum_probs=186.2
Q ss_pred CchHHHHHHHHHHhC-CceEEecCCccEEEeCCHHHHHHHHHhCCCccCCCCCcccccccccCCCceeeCCCCchHHHHH
Q 045796 68 TDLYKSLTKLADAYG-PIYKFWLANKLFVVVSSSSIAKEMVRDKDTIFSNRQTTVATLTPTLGGNDIVFSPYGAQWRRLR 146 (378)
Q Consensus 68 ~~~~~~~~~~~~~yG-~i~~~~~g~~~~v~v~dpe~i~~vl~~~~~~f~~r~~~~~~~~~~~~~~~~~~~~~g~~w~~~R 146 (378)
.+++..+.++++++| ||+++..++ +.++|+||+.+++||. +...|++++...........+. .++..+|+.|+++|
T Consensus 38 ~dp~~~~~~lr~~~G~pv~~~~~~~-~~~vv~~~~~v~~vl~-~~~~f~~~~~~~~~~~~~~~~~-~~~~~dg~~h~~~R 114 (421)
T 3lxh_A 38 QGFHEAWKRVQQPDTPPLVWTPFTG-GHWIATRGTLIDEIYR-SPERFSSRVIWVPREAGEAYDM-VPTKLDPPEHTPYR 114 (421)
T ss_dssp GCHHHHHHHHCCTTCCSEEEESSTT-SEEEECSHHHHHHHHT-CTTTEETTCCSSSHHHHHHCCC-TTTTCCTTTHHHHH
T ss_pred cChhHHHHHHHhcCCCCeEeccCCC-CeEEEcCHHHHHHHHc-ChhhccCCcccCCccccccccc-CCccCCcHHHHHHH
Confidence 478888998877655 899998776 5899999999999994 4457877763322111111222 34556799999999
Q ss_pred HHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHhccCCCCcchHH-hHHHHHHHHHHHHHhcCCCCCCCCcchhHHHHHHH
Q 045796 147 KAMVGEMMTNSSLDSCSALRKQVLKNTIRDLYNNKIGKPVDIGE-LSVSTSVNALENMLWGGGTGSGAHKDHTLEMKQLL 225 (378)
Q Consensus 147 k~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~d~~~-~~~~~t~dii~~~~fG~~~~~~~~~~~~~~~~~~~ 225 (378)
|++. ++|+++.++.+.+.+++.++++++.|.. ++++|+.. ....++.++++. +||.+.+ ....+.+..
T Consensus 115 ~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~---~~~~d~~~~~~~~~~~~v~~~-~~G~~~~------~~~~~~~~~ 183 (421)
T 3lxh_A 115 KAID-KGLNLAEIRKLEDQIRTIAVEIIEGFAD---RGHCEFGSEFSTVFPVRVFLA-LAGLPVE------DATKLGLLA 183 (421)
T ss_dssp HHHH-HHHSHHHHHTTHHHHHHHHHHHHHTTTT---TSEEEHHHHTTTTHHHHHHHH-HHTCCGG------GHHHHHHHH
T ss_pred HHHh-hhcCHHHHHHHHHHHHHHHHHHHHHHhh---cCCeehHHHHHHHHHHHHHHH-HcCCCHH------HHHHHHHHH
Confidence 9985 8999999999999999999999999874 45788754 446788888887 4886651 234455544
Q ss_pred HHHHHHhCCCCcccccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCCCCCCCCcHHHHHHhccccCCC
Q 045796 226 DDIMELQGVPNISDIFPVLSRFDLQGVERKCKEIALWVEKIFNSAIEKRKNLIAKGTLKFDGRNKDFLQTFIEMLDSEDS 305 (378)
Q Consensus 226 ~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~ 305 (378)
..++.. ...+|. ...++..+..+.+.+++.++|+++++. ...|+++.|++...+
T Consensus 184 ~~~~~~------~~~~p~-------~~~~~~~~~~~~~~~~~~~~i~~r~~~----------~~~dll~~ll~~~~~--- 237 (421)
T 3lxh_A 184 NEMTRP------SGNTPE-------EQGRSLEAANKGFFEYVAPIIAARRGG----------SGTDLITRILNVEID--- 237 (421)
T ss_dssp HHHHSC------CCSSHH-------HHHHHHHHHHHHHHHHHHHHHHHHTTC----------CCCSHHHHHHTSCBT---
T ss_pred HHHhcc------ccCCCc-------hhHHHHHHHHHHHHHHHHHHHHHHHhC----------CCCCHHHHHHhhhcc---
Confidence 444321 001111 123455666777888888888777532 357999999987543
Q ss_pred CCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcCchHHHHHHHHHHH
Q 045796 306 SISLNRTELIALLLDIILGGTDTTTTIMEWTLTKLLQFPVEMKKVQAELAE 356 (378)
Q Consensus 306 ~~~l~~~ei~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~iq~kl~~Ei~~ 356 (378)
+..++++|+++++.++++||+|||+++|+|++++|++||++|+|+|+|++.
T Consensus 238 ~~~l~~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~~ 288 (421)
T 3lxh_A 238 GKPMPDDRALGLVSLLLLGGLDTVVNFLGFMMIYLSRHPETVAEMRREPLK 288 (421)
T ss_dssp TBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHCHHH
T ss_pred CCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCHHHHHHHHhCHHH
Confidence 457999999999999999999999999999999999999999999999863
No 63
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein, vancomycin biosynthes carrier protein, oxidoreductase; HET: HEM; 2.10A {Amycolatopsis balhimycina}
Probab=99.96 E-value=1.5e-29 Score=241.60 Aligned_cols=242 Identities=11% Similarity=0.113 Sum_probs=180.4
Q ss_pred CchHHHHHHHHHHhCCceEEe-cCC-ccEEEeCCHHHHHHHHHhCCCccCCCCCccccccccc--CC-CceeeCCCCchH
Q 045796 68 TDLYKSLTKLADAYGPIYKFW-LAN-KLFVVVSSSSIAKEMVRDKDTIFSNRQTTVATLTPTL--GG-NDIVFSPYGAQW 142 (378)
Q Consensus 68 ~~~~~~~~~~~~~yG~i~~~~-~g~-~~~v~v~dpe~i~~vl~~~~~~f~~r~~~~~~~~~~~--~~-~~~~~~~~g~~w 142 (378)
.+++..+.++++ ||||+++. .|. .+.++|++|+.+++||.+. ..|++++.......... .. .+.++..+|+.|
T Consensus 37 ~dp~~~~~~lr~-~gpV~~~~~~g~~~~~~vv~~~~~v~~vl~~~-~~fs~~~~~~~~~~~~~~~~~~~~~l~~~dg~~h 114 (415)
T 3mgx_A 37 LERHARWRELAA-EDAMVWSDPGSSPSGFWSVFSHRACAAVLAPS-APLTSEYGMMIGFDRDHPDNSGGRMMVVSEHEQH 114 (415)
T ss_dssp TTHHHHHHHHHH-HTCCEEECSSSSSSCEEEECSHHHHHHHSCTT-SSEECTTCSSTTCCSSSCCTTTTTSGGGCCHHHH
T ss_pred CChhHHHHHHHh-cCCEeeccCCCCcCCEEEEecHHHHHHHHhCh-hhhcCCccccccccccccccccCCCccccCcHHH
Confidence 468888998876 99999987 443 6899999999999999543 46777654322211100 01 233556679999
Q ss_pred HHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHhccCCCCcchHHhH-HHHHHHHHHHHHhcCCCCCCCCcchhHHH
Q 045796 143 RRLRKAMVGEMMTNSSLDSCSALRKQVLKNTIRDLYNNKIGKPVDIGELS-VSTSVNALENMLWGGGTGSGAHKDHTLEM 221 (378)
Q Consensus 143 ~~~Rk~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~d~~~~~-~~~t~dii~~~~fG~~~~~~~~~~~~~~~ 221 (378)
+++||++. ++|++++++.+.+.+++.++++++.|.. ++++|+..++ ..+++++|+. +||.+. . ....+
T Consensus 115 ~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~~---~~~~dl~~~~~~~~~~~vi~~-l~G~~~-~-----~~~~~ 183 (415)
T 3mgx_A 115 RKLRKLVG-PLLSRAAARKLAERVRIEVGDVLGRVLD---GEVCDAATAIGPRIPAAVVCE-ILGVPA-E-----DEDML 183 (415)
T ss_dssp HHHHHHHG-GGSSHHHHHHSHHHHHHHHHHHTTTSSS---SSCEESTTTTTTHHHHHHHHH-HHTCCG-G-----GHHHH
T ss_pred HHHHHHhH-hhhCHHHHHHHHHHHHHHHHHHHHHHHh---cCCcchHHHHHHHHHHHHHHH-HcCCCH-H-----HHHHH
Confidence 99999985 8999999999999999999999998864 3479998887 6799999998 588654 1 23344
Q ss_pred HHHHHHHHHHhCCCCcccccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCCCCCCCCcHHHHHHhccc
Q 045796 222 KQLLDDIMELQGVPNISDIFPVLSRFDLQGVERKCKEIALWVEKIFNSAIEKRKNLIAKGTLKFDGRNKDFLQTFIEMLD 301 (378)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~~~~~dll~~ll~~~~ 301 (378)
.+....++.. . .|.. .+.. . .+..+.+.+++.++|+++++. ...|+++.|++..
T Consensus 184 ~~~~~~~~~~----~----~~~~--~~~~-~----~~~~~~l~~~~~~~i~~rr~~----------~~~dll~~ll~~~- 237 (415)
T 3mgx_A 184 IDLTNHAFGG----E----DELF--DGMT-P----RQAHTEILVYFDELITARRKE----------PGDDLVSTLVTDD- 237 (415)
T ss_dssp HHHHHHHTSC----C----C------CCC-H----HHHHHHHHHHHHHHHHHHHHS----------CCSSHHHHHHHCT-
T ss_pred HHHHHHHHcc----c----Cccc--chHH-H----HHHHHHHHHHHHHHHHHHHhC----------CCCCHHHHHHhCC-
Confidence 4444443321 0 1110 1111 1 134566788888888887652 1479999999752
Q ss_pred cCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcCchHHHHHHHHH
Q 045796 302 SEDSSISLNRTELIALLLDIILGGTDTTTTIMEWTLTKLLQFPVEMKKVQAEL 354 (378)
Q Consensus 302 ~~~~~~~l~~~ei~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~iq~kl~~Ei 354 (378)
.++++||++++.++++||+|||+++|+|++++|++||++|+|+++|+
T Consensus 238 ------~ls~~el~~~~~~ll~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E~ 284 (415)
T 3mgx_A 238 ------DLTIDDVLLNCDNVLIGGNETTRHAITGAVHALATVPGLLTALRDGS 284 (415)
T ss_dssp ------TSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSTTHHHHHHHTS
T ss_pred ------CCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCHHHHHHHHhCh
Confidence 68999999999999999999999999999999999999999999986
No 64
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A*
Probab=99.96 E-value=1.6e-29 Score=239.97 Aligned_cols=242 Identities=12% Similarity=0.112 Sum_probs=183.7
Q ss_pred CCchHHHHHHHHHHhCCceEEecCCccEEEeCCHHHHHHHHHhCCCccCCCCCcccccccccCCCceeeCCCCchHHHHH
Q 045796 67 GTDLYKSLTKLADAYGPIYKFWLANKLFVVVSSSSIAKEMVRDKDTIFSNRQTTVATLTPTLGGNDIVFSPYGAQWRRLR 146 (378)
Q Consensus 67 ~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~v~dpe~i~~vl~~~~~~f~~r~~~~~~~~~~~~~~~~~~~~~g~~w~~~R 146 (378)
..+++..+.+|+++ |||+++..|+ +.++|+||+.+++||.+. ..|++++...........+ ..+++.+|+.|+++|
T Consensus 23 ~~~p~~~~~~l~~~-Gpv~~~~~~~-~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~-~~~~~~~g~~h~~~R 98 (396)
T 3oft_A 23 EQDYFAAWKTLLDG-PGLVWSTANG-GHWIAARGDVVRELWGDA-ERLSSQCLAVTPGLGKVMQ-FIPLQQDGAEHKAFR 98 (396)
T ss_dssp TTCHHHHHHGGGGS-CSEEEECSTT-SEEEECSHHHHHHHHHCT-TTEESTTCCSSTTHHHHHC-CTTTTCCHHHHHHHH
T ss_pred hcChHHHHHHHHhc-CCeeeecCCC-CEEEEcCHHHHHHHHcCc-ccccCCcccCCCccccccc-cCccccCCcHHHHHH
Confidence 45789999999998 9999998874 589999999999999654 5787776322211111112 234566799999999
Q ss_pred HHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHhccCCCCcchHHhH-HHHHHHHHHHHHhcCCCCCCCCcchhHHHHHHH
Q 045796 147 KAMVGEMMTNSSLDSCSALRKQVLKNTIRDLYNNKIGKPVDIGELS-VSTSVNALENMLWGGGTGSGAHKDHTLEMKQLL 225 (378)
Q Consensus 147 k~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~d~~~~~-~~~t~dii~~~~fG~~~~~~~~~~~~~~~~~~~ 225 (378)
|++. ++|+++.++.+.+.+++.++++++.|.. ++++|+...+ ..++.++++. +||.+.+ ....+.+.+
T Consensus 99 ~~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~---~~~~d~~~~~~~~~~~~v~~~-~~G~~~~------~~~~~~~~~ 167 (396)
T 3oft_A 99 TPVM-KGLASRFVVALEPKVQAVARKLMESLRP---RGSCDFVSDFAEILPLNIFLT-LIDVPLE------DRPRLRQLG 167 (396)
T ss_dssp HHHH-HHTCHHHHHHHHHHHHHHHHHHHHHHGG---GSEEEHHHHTTTTHHHHHHHH-HTTCCGG------GHHHHHHHH
T ss_pred HHhh-hhhCHHHHHHHHHHHHHHHHHHHHHhhh---cCCccHHHHHHHHHHHHHHHH-HcCCCHH------HHHHHHHHH
Confidence 9985 8999999999999999999999999975 3467876555 6678888877 5786541 233444444
Q ss_pred HHHHHHhCCCCcccccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCCCCCCCCcHHHHHHhccccCCC
Q 045796 226 DDIMELQGVPNISDIFPVLSRFDLQGVERKCKEIALWVEKIFNSAIEKRKNLIAKGTLKFDGRNKDFLQTFIEMLDSEDS 305 (378)
Q Consensus 226 ~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~ 305 (378)
..++. . .. .++..+..+.+.+++.++|+++++. ...|+++.|++...+
T Consensus 168 ~~~~~---~------------~~----~~~~~~~~~~~~~~~~~~i~~r~~~----------~~~d~l~~ll~~~~~--- 215 (396)
T 3oft_A 168 VQLTR---P------------DG----SMTVEQLKQAADDYLWPFIEKRMAQ----------PGDDLFSRILSEPVG--- 215 (396)
T ss_dssp HHHHS---C------------CS----SCCHHHHHHHHHHHHHHHHHHHHHS----------CCSSHHHHHHTSCBT---
T ss_pred HHHhC---C------------CC----HHHHHHHHHHHHHHHHHHHHHHHhC----------CCCCHHHHHHHhhcc---
Confidence 43321 0 00 0122345567788888888887653 247999999987543
Q ss_pred CCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcCchHHHHHHHHHH
Q 045796 306 SISLNRTELIALLLDIILGGTDTTTTIMEWTLTKLLQFPVEMKKVQAELA 355 (378)
Q Consensus 306 ~~~l~~~ei~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~iq~kl~~Ei~ 355 (378)
+..++++++++++.++++||+|||+++|+|++++|++||++|+|+++|++
T Consensus 216 ~~~l~~~el~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~ 265 (396)
T 3oft_A 216 GRPWTVDEARRMCRNLLFGGLDTVAAMIGMVALHLARHPEDQRLLRERPD 265 (396)
T ss_dssp TBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG
T ss_pred CCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHH
Confidence 45799999999999999999999999999999999999999999999985
No 65
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta binding protein; HET: HEM; 2.47A {Micromonospora echinospora}
Probab=99.96 E-value=6e-29 Score=236.16 Aligned_cols=243 Identities=15% Similarity=0.157 Sum_probs=181.6
Q ss_pred chHHHHHHHHHHhCCceEEecCCccEEEeCCHHHHHHHHHhCCCccCCCCCcccc------cccccC-CCceeeCCCCch
Q 045796 69 DLYKSLTKLADAYGPIYKFWLANKLFVVVSSSSIAKEMVRDKDTIFSNRQTTVAT------LTPTLG-GNDIVFSPYGAQ 141 (378)
Q Consensus 69 ~~~~~~~~~~~~yG~i~~~~~g~~~~v~v~dpe~i~~vl~~~~~~f~~r~~~~~~------~~~~~~-~~~~~~~~~g~~ 141 (378)
+++..+.++ ++||||++ + +.+.++|+||+.+++||.+. .|++++..... ...... +.++ +..+|+.
T Consensus 14 ~p~~~~~~l-~~yGpv~~-~--g~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~g~~ 86 (397)
T 3buj_A 14 DPYPSYHWL-LRHDPVHR-G--AHRVWYVSRFADVRAVLGDE--RFARTGIRRFWTDLVGPGLLAEIVGDII-LFQDEPD 86 (397)
T ss_dssp CCHHHHHHH-HHHCSEEE-C--GGGCEEECSHHHHHHHHTCT--TEESHHHHHHHHHHHCSSHHHHHHTTCG-GGCCTTH
T ss_pred CchHHHHHH-HhcCCeee-C--CCCeEEEcCHHHHHHHHcCC--CcccCccccccccccccccccccccccc-ccCCchh
Confidence 567777766 69999998 6 47899999999999999763 57654321100 011100 3444 4457999
Q ss_pred HHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHhccCCCCcchHH-hHHHHHHHHHHHHHhcCCCCCCCCcchhHH
Q 045796 142 WRRLRKAMVGEMMTNSSLDSCSALRKQVLKNTIRDLYNNKIGKPVDIGE-LSVSTSVNALENMLWGGGTGSGAHKDHTLE 220 (378)
Q Consensus 142 w~~~Rk~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~d~~~-~~~~~t~dii~~~~fG~~~~~~~~~~~~~~ 220 (378)
|+++||++. ++|+++.++.+.+.++++++++++.|.. ++++|+.. ....+++|+++.+ ||.+.+ ....
T Consensus 87 h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~---~~~~dl~~~~~~~~~~~vi~~~-~G~~~~------~~~~ 155 (397)
T 3buj_A 87 HGRLRGVVG-PAFSPSALRRLEPVIAGTVDDLLRPALA---RGAMDVVDELAYPLALRAVLGL-LGLPAA------DWGA 155 (397)
T ss_dssp HHHHHHHHG-GGSSTTTTGGGHHHHHHHHHHHHHHHHT---TTEEEHHHHTHHHHHHHHHHHH-HTCCGG------GHHH
T ss_pred HHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHHHHHHhh---cCCeehHHHHHHHhHHHHHHHH-hCCCHH------HHHH
Confidence 999999986 8999999999999999999999999984 45899864 5578999999998 998762 1234
Q ss_pred HHHHHHHHHHHhCCCCcccccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCCCCCCCCcHHHHHHhcc
Q 045796 221 MKQLLDDIMELQGVPNISDIFPVLSRFDLQGVERKCKEIALWVEKIFNSAIEKRKNLIAKGTLKFDGRNKDFLQTFIEML 300 (378)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~~~~~dll~~ll~~~ 300 (378)
+.+....+..... + .++ ....++.....+.+.+++.++|+++++.. ..|+++.|++..
T Consensus 156 ~~~~~~~~~~~~~---------~--~~~-~~~~~~~~~~~~~~~~~~~~~i~~r~~~~----------~~dll~~ll~~~ 213 (397)
T 3buj_A 156 VGRWSRDVGRTLD---------R--GAS-AEDMRRGHAAIAEFADYVERALARRRREG----------GEDLLALMLDAH 213 (397)
T ss_dssp HHHHHHHHHGGGC---------S--SCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHC----------CCSHHHHHHHHH
T ss_pred HHHHHHHHHhhcC---------C--CCC-hHHHHHHHHHHHHHHHHHHHHHHHHHcCC----------CCCHHHHHHHhh
Confidence 4444444332211 1 011 11234555666778888888888876531 369999999875
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcCchHHHHHHHHHH
Q 045796 301 DSEDSSISLNRTELIALLLDIILGGTDTTTTIMEWTLTKLLQFPVEMKKVQAELA 355 (378)
Q Consensus 301 ~~~~~~~~l~~~ei~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~iq~kl~~Ei~ 355 (378)
++ +. ++++||++++.++++||+|||+++|+|++++|++||++|+|+++|++
T Consensus 214 ~~---~~-ls~~ei~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~ 264 (397)
T 3buj_A 214 DR---GL-MSRNEIVSTVVTFIFTGHETVASQVGNAVLSLLAHPDQLDLLRRRPD 264 (397)
T ss_dssp HT---TS-SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHCGG
T ss_pred hc---CC-CCHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHhCHHHHHHHhhCHH
Confidence 32 33 99999999999999999999999999999999999999999999974
No 66
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A {Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A*
Probab=99.96 E-value=1.1e-29 Score=242.18 Aligned_cols=242 Identities=14% Similarity=0.132 Sum_probs=180.9
Q ss_pred CCchHHHHHHHHHHhCCceEEecCC--ccEEEeCCHHHHHHHHHhCCCccCCCCCccc----ccccccC-CCceeeCCCC
Q 045796 67 GTDLYKSLTKLADAYGPIYKFWLAN--KLFVVVSSSSIAKEMVRDKDTIFSNRQTTVA----TLTPTLG-GNDIVFSPYG 139 (378)
Q Consensus 67 ~~~~~~~~~~~~~~yG~i~~~~~g~--~~~v~v~dpe~i~~vl~~~~~~f~~r~~~~~----~~~~~~~-~~~~~~~~~g 139 (378)
++.+|..+.+++ +||||+++++++ .+.++|++|+.+++||.+. .|++++.... ....... +.+ +++.+|
T Consensus 26 g~~p~~~~~~l~-~~Gpv~~~~~~~g~~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~-l~~~dg 101 (411)
T 2dkk_A 26 GPEFDPVLAELM-REGPLTRVRLPHGEGWAWLATRYDDVKAITNDP--RFGRAEVTQRQITRLAPHFKPRPGS-LAFADQ 101 (411)
T ss_dssp SSCCCHHHHHHH-TTCSEEEEECSBSBSCEEEECSHHHHHHHTTCT--TEESGGGGGSCBCBSSSCCCCCTTC-STTCCT
T ss_pred cccccHHHHHHH-hcCCeEeeecCCCceeEEEEcCHHHHHHHHcCC--CcccCCCCCCCccccccchhccccc-cccCCc
Confidence 456778888887 899999999754 7899999999999999763 5765543211 1111100 334 455679
Q ss_pred chHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHhccCCCCcchHHhHH-HHHHHHHHHHHhcCCCCCCCCcchh
Q 045796 140 AQWRRLRKAMVGEMMTNSSLDSCSALRKQVLKNTIRDLYNNKIGKPVDIGELSV-STSVNALENMLWGGGTGSGAHKDHT 218 (378)
Q Consensus 140 ~~w~~~Rk~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~d~~~~~~-~~t~dii~~~~fG~~~~~~~~~~~~ 218 (378)
+.|+++||++. ++|++++++.+.+.+++.++++++.|.. .|+++|+...+. .+++|+|+. +||.+.+ ..
T Consensus 102 ~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~--~g~~~dl~~~~~~~~~~~vi~~-l~G~~~~------~~ 171 (411)
T 2dkk_A 102 PDHNRLRRAVA-GAFTVGATKRLRPRAQEILDGLVDGILA--EGPPADLVERVLEPFPIAVVSE-VMGVPAA------DR 171 (411)
T ss_dssp THHHHHHHHHG-GGSSHHHHHHHHHHHHHHHHHHHHHHHH--HCSCEEHHHHTTTHHHHHHHHH-HHTCCSS------HH
T ss_pred hHHHHHHHHhh-HhhCHHHHHHHHHHHHHHHHHHHHHHHh--cCCCeehHHHHHHHHHHHHHHH-HhCCCHH------HH
Confidence 99999999985 8999999999999999999999999986 355899987775 799999999 5998762 12
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCCCCCCCCcHHHHHHh
Q 045796 219 LEMKQLLDDIMELQGVPNISDIFPVLSRFDLQGVERKCKEIALWVEKIFNSAIEKRKNLIAKGTLKFDGRNKDFLQTFIE 298 (378)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~~~~~dll~~ll~ 298 (378)
..+.+... .... ..+ . .++..+..+.+.+++.++|+++++. ...|+++.|++
T Consensus 172 ~~~~~~~~----~~~~-----~~~-----~----~~~~~~~~~~l~~~~~~~i~~r~~~----------~~~dll~~ll~ 223 (411)
T 2dkk_A 172 ERVHSWTR----QIIS-----TSG-----G----AEAAERAKRGLYGWITETVRARAGS----------EGGDVYSMLGA 223 (411)
T ss_dssp HHHHHHHG----GGCS-----SCS-----C----SHHHHHHHHHHHHHHHHHHHTTTTC----------CSSCHHHHHHH
T ss_pred HHHHHHHH----HHHh-----ccc-----h----HHHHHHHHHHHHHHHHHHHHHHHhC----------CCCCHHHHHHH
Confidence 22322221 1110 111 0 1334455666777777777665431 24699999998
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcCchHHHHHHHHHH
Q 045796 299 MLDSEDSSISLNRTELIALLLDIILGGTDTTTTIMEWTLTKLLQFPVEMKKVQAELA 355 (378)
Q Consensus 299 ~~~~~~~~~~l~~~ei~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~iq~kl~~Ei~ 355 (378)
. .+ +..++++||++++.++++|| |||+++|+|++++|++||++|+||++|++
T Consensus 224 ~-~~---~~~ls~~el~~~~~~l~~AG-eTta~~l~~~l~~L~~~P~~~~~l~~E~~ 275 (411)
T 2dkk_A 224 A-VG---RGEVGETEAVGLAGPLQIGG-EAVTHNVGQMLYLLLTRRELMARMRERPG 275 (411)
T ss_dssp H-HH---TTSSCTTSHHHHHHHHHHTH-HHHHHHHHHHHHHHHHSHHHHHHHHHCTT
T ss_pred h-cC---CCCCCHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHhCHHHHHHHHhCHH
Confidence 7 32 45789999999999999999 99999999999999999999999999974
No 67
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A* 1lgf_A*
Probab=99.96 E-value=4.3e-29 Score=237.26 Aligned_cols=236 Identities=11% Similarity=0.195 Sum_probs=174.1
Q ss_pred HHHHHHHhCCceEEecC-Cc---cEEEeCCHHHHHHHHHhCCCccCCCCCc------cccccc--ccCCCceeeCCCCch
Q 045796 74 LTKLADAYGPIYKFWLA-NK---LFVVVSSSSIAKEMVRDKDTIFSNRQTT------VATLTP--TLGGNDIVFSPYGAQ 141 (378)
Q Consensus 74 ~~~~~~~yG~i~~~~~g-~~---~~v~v~dpe~i~~vl~~~~~~f~~r~~~------~~~~~~--~~~~~~~~~~~~g~~ 141 (378)
+.+|+++ |||++++++ +. +.++|+||+.+++||.++. .|++++.. ...... ...+.++ +..+|+.
T Consensus 19 ~~~l~~~-Gpv~~~~~~~g~~~~~~vvv~~~~~v~~vl~~~~-~f~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~g~~ 95 (398)
T 1lfk_A 19 ADELLAA-GALTRVTIGSGADAETHWMATAHAVVRQVMGDHQ-QFSTRRRWDPRDEIGGKGIFRPRELVGNL-MDYDPPE 95 (398)
T ss_dssp CHHHHTS-CSEEEEC------CCCEEEECSHHHHHHHHHCTT-TEEECTTCCC-------------CCTTCG-GGCCTTH
T ss_pred hHHHHhc-CCccccccCCCCcccceEEEecHHHHHHHHhhCc-ccccccccccccccCCcccccccccccCc-cccCCHH
Confidence 3346665 999999875 45 8999999999999994332 47666541 101101 1123344 4457999
Q ss_pred HHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHhccCCCCcchHHhHHH-HHHHHHHHHHhcCCCCCCCCcchhHH
Q 045796 142 WRRLRKAMVGEMMTNSSLDSCSALRKQVLKNTIRDLYNNKIGKPVDIGELSVS-TSVNALENMLWGGGTGSGAHKDHTLE 220 (378)
Q Consensus 142 w~~~Rk~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~d~~~~~~~-~t~dii~~~~fG~~~~~~~~~~~~~~ 220 (378)
|+++||++. +.|+++.++.+.+.++++++++++.|.+ .|+++|+.+++.. +++++++. +||.+.+ ....
T Consensus 96 ~~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~l~~~l~~--~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~------~~~~ 165 (398)
T 1lfk_A 96 HTRLRRKLT-PGFTLRKMQRMAPYIEQIVNDRLDEMER--AGSPADLIAFVADKVPGAVLCE-LVGVPRD------DRDM 165 (398)
T ss_dssp HHHHHHHHG-GGGCHHHHHHHHHHHHHHHHHHHHHHHH--HCSSEEHHHHTTTTHHHHHHHH-HHTCCGG------GHHH
T ss_pred HHHHHHHHH-hhhCHHHHHHHHHHHHHHHHHHHHHHHh--cCCCccHHHHHHHHHHHHHHHH-HcCCCHH------HHHH
Confidence 999999985 8999999999999999999999999975 3568999999886 99999998 5898762 1233
Q ss_pred HHHHHHHHHHHhCCCCcccccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCCCCCCCCcHHHHHHhcc
Q 045796 221 MKQLLDDIMELQGVPNISDIFPVLSRFDLQGVERKCKEIALWVEKIFNSAIEKRKNLIAKGTLKFDGRNKDFLQTFIEML 300 (378)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~~~~~dll~~ll~~~ 300 (378)
+.+.+..++. . .+..++.....+.+.+++.+.|+++++. ...|+++.|++..
T Consensus 166 ~~~~~~~~~~---------~---------~~~~~~~~~~~~~~~~~~~~~i~~r~~~----------~~~dll~~ll~~~ 217 (398)
T 1lfk_A 166 FMKLCHGHLD---------A---------SLSQKRRAALGDKFSRYLLAMIARERKE----------PGEGMIGAVVAEY 217 (398)
T ss_dssp HHHHHHHTTC---------T---------TSCHHHHHHHHHHHHHHHHHHHHHHHHS----------CCSSHHHHHHHHH
T ss_pred HHHHHHHHHh---------c---------ccchHHHHHHHHHHHHHHHHHHHHHHhC----------CCCCHHHHHHHhc
Confidence 4333332210 0 0112445556677888888888887652 1369999999864
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcCchHHHHHHHHHH
Q 045796 301 DSEDSSISLNRTELIALLLDIILGGTDTTTTIMEWTLTKLLQFPVEMKKVQAELA 355 (378)
Q Consensus 301 ~~~~~~~~l~~~ei~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~iq~kl~~Ei~ 355 (378)
+ ..++++||++++.++++||+|||+++|+|++++|++||++|+|+|+|++
T Consensus 218 -~----~~l~~~el~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~ 267 (398)
T 1lfk_A 218 -G----DDATDEELRGFCVQVMLAGDDNISGMIGLGVLAMLRHPEQIDAFRGDEQ 267 (398)
T ss_dssp -G----GGSCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHSGGGGGGGSSCHH
T ss_pred -C----CCCCHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHCHHHHHHHHhCHH
Confidence 2 2689999999999999999999999999999999999999999999974
No 68
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A*
Probab=99.96 E-value=1.9e-28 Score=232.68 Aligned_cols=240 Identities=13% Similarity=0.095 Sum_probs=176.5
Q ss_pred CCchHHHHHHHHHHhCCceEEec-CCccEEEeCCHHHHHHHHHhCCCccC-C-CCCc--cccc--cccc-CCCceeeCCC
Q 045796 67 GTDLYKSLTKLADAYGPIYKFWL-ANKLFVVVSSSSIAKEMVRDKDTIFS-N-RQTT--VATL--TPTL-GGNDIVFSPY 138 (378)
Q Consensus 67 ~~~~~~~~~~~~~~yG~i~~~~~-g~~~~v~v~dpe~i~~vl~~~~~~f~-~-r~~~--~~~~--~~~~-~~~~~~~~~~ 138 (378)
..+++..+.+| ++||||+++++ |+.+.++++||+.++++|.++ .|+ + ++.. .... .... .+.++++.
T Consensus 15 ~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-- 89 (396)
T 1n40_A 15 GDRIPDAVAEL-RTREPIRKVRTITGAEAWLVSSYALCTQVLEDR--RFSMKETAAAGAPRLNALTVPPEVVNNMGNI-- 89 (396)
T ss_dssp SSSCCHHHHHH-HHHCSEEEEECTTSCEEEEECSHHHHHHHHTCT--TEESGGGGSTTCCCSSCCSSCGGGGGHHHHH--
T ss_pred ccCccHHHHHH-HHhCCeeEeecCCCceEEEEecHHHHHHHHhCC--CcccccCccccccccccccCCchhhhhhhhH--
Confidence 35678899999 99999999997 888999999999999999875 366 5 4421 1110 0110 12344433
Q ss_pred CchHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHhccCCCCcchHHhH-HHHHHHHHHHHHhcCCCCCCCCcch
Q 045796 139 GAQWRRLRKAMVGEMMTNSSLDSCSALRKQVLKNTIRDLYNNKIGKPVDIGELS-VSTSVNALENMLWGGGTGSGAHKDH 217 (378)
Q Consensus 139 g~~w~~~Rk~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~d~~~~~-~~~t~dii~~~~fG~~~~~~~~~~~ 217 (378)
.|+++||++. +.|+++ ++.+.+.++++++++++.|.+ .++++|+...+ ..+++|+++. +||.+.+ .
T Consensus 90 --~h~~~R~~~~-~~fs~~-~~~~~~~i~~~~~~l~~~l~~--~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~------~ 156 (396)
T 1n40_A 90 --ADAGLRKAVM-KAITPK-APGLEQFLRDTANSLLDNLIT--EGAPADLRNDFADPLATALHCK-VLGIPQE------D 156 (396)
T ss_dssp --HHTTCHHHHH-HHTSSC-STTHHHHHHHHHHHHHHHHHH--HCSCEETTTTTHHHHHHHHHHH-HHTCCGG------G
T ss_pred --HHHHHHHHHH-HhhChH-HHHhHHHHHHHHHHHHHHHHh--cCCCccHHHHHHHHhHHHHHHH-HhCCChh------h
Confidence 9999999986 789999 999999999999999999975 25689998666 4899999999 8998762 1
Q ss_pred hHHHHHHHHHHHHHhCCCCcccccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCCCCCCCCcHHHHHH
Q 045796 218 TLEMKQLLDDIMELQGVPNISDIFPVLSRFDLQGVERKCKEIALWVEKIFNSAIEKRKNLIAKGTLKFDGRNKDFLQTFI 297 (378)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~~~~~dll~~ll 297 (378)
..++.+.+..++.. . . ..+ .++..+..+.+ +++.++|+ . ....+|+++.|+
T Consensus 157 ~~~~~~~~~~~~~~---~---~------~~p----~~~~~~~~~~~-~~~~~~i~----~--------~~~~~dll~~ll 207 (396)
T 1n40_A 157 GPKLFRSLSIAFMS---S---A------DPI----PAAKINWDRDI-EYMAGILE----N--------PNITTGLMGELS 207 (396)
T ss_dssp HHHHHHTHHHHTBC---C---S------SCC----HHHHHHHHHHH-HHHHHHHH----C--------TTCCSHHHHHHH
T ss_pred HHHHHHHHHHHhcc---c---c------CCC----HHHHHHHHHHH-HHHHHHHh----C--------CCCCCCHHHHHH
Confidence 23444444333211 0 0 011 13334444455 66666665 1 113579999999
Q ss_pred hcc-ccCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcCchHHHHHHHHHH
Q 045796 298 EML-DSEDSSISLNRTELIALLLDIILGGTDTTTTIMEWTLTKLLQFPVEMKKVQAELA 355 (378)
Q Consensus 298 ~~~-~~~~~~~~l~~~ei~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~iq~kl~~Ei~ 355 (378)
+.. ++ ++..+++++|++++.++++||+|||+++|+|++++|++||++|+|+|+|++
T Consensus 208 ~~~~~~--~~~~l~~~~i~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~ 264 (396)
T 1n40_A 208 RLRKDP--AYSHVSDELFATIGVTFFGAGVISTGSFLTTALISLIQRPQLRNLLHEKPE 264 (396)
T ss_dssp HHHTSG--GGTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCGG
T ss_pred Hhhccc--ccCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcChHHHHHHHhCHH
Confidence 864 21 135799999999999999999999999999999999999999999999964
No 69
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase, oxidoreductase; HET: HEM; 2.00A {Sphingopyxis macrogoltabida}
Probab=99.95 E-value=6.1e-27 Score=224.27 Aligned_cols=249 Identities=15% Similarity=0.130 Sum_probs=180.4
Q ss_pred CchHHHHHHHHHHhCCceEEec-CCccEEEeCCHHHHHHHHHhCCCccCCCCC---ccccc-----ccccCCCceeeCCC
Q 045796 68 TDLYKSLTKLADAYGPIYKFWL-ANKLFVVVSSSSIAKEMVRDKDTIFSNRQT---TVATL-----TPTLGGNDIVFSPY 138 (378)
Q Consensus 68 ~~~~~~~~~~~~~yG~i~~~~~-g~~~~v~v~dpe~i~~vl~~~~~~f~~r~~---~~~~~-----~~~~~~~~~~~~~~ 138 (378)
.+++..+.+|.++ |||+++.. ++.+.++|++++.+++|+.+. ..|++++. ..... .....+.+.++..+
T Consensus 38 ~~p~~~~~~lr~~-gpv~~~~~~~~~~~~vvt~~~~v~~vl~d~-~~fs~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d 115 (426)
T 3rwl_A 38 DSVGEYFKRLRKD-DPVHYCADSAFGPYWSITKYNDIMHVDTNH-DIFSSDAGYGGIIIDDGIQKGGDGGLDLPNFIAMD 115 (426)
T ss_dssp TCHHHHHHHHHHH-CSEEEESCCTTCSEEEECSHHHHHHHHHCT-TTEECCGGGTCSSSSCCC-------CCCCCGGGCC
T ss_pred CCccHHHHHHHhc-CCeeeccCCCCCCEEEEcCHHHHHHHHcCC-cccccccccCCCCcccccccccccccccCcccccC
Confidence 3578888888765 99999986 556799999999999999775 34665431 11111 00011122345667
Q ss_pred CchHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHhccCCCCcchHHhH-HHHHHHHHHHHHhcCCCCCCCCcch
Q 045796 139 GAQWRRLRKAMVGEMMTNSSLDSCSALRKQVLKNTIRDLYNNKIGKPVDIGELS-VSTSVNALENMLWGGGTGSGAHKDH 217 (378)
Q Consensus 139 g~~w~~~Rk~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~d~~~~~-~~~t~dii~~~~fG~~~~~~~~~~~ 217 (378)
|+.|+++||++. +.|+++.++.+.+.+++.++++++.|. .++++|+...+ ..+++++++. +||.+. ..
T Consensus 116 g~~h~~~R~~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l~---~~~~~dl~~~~~~~~~~~vi~~-l~G~~~-~~----- 184 (426)
T 3rwl_A 116 RPRHDEQRKAVS-PIVAPANLAALEGTIRERVSKTLDGLP---VGEEFDWVDRVSIEITTQMLAT-LFDFPF-EE----- 184 (426)
T ss_dssp TTHHHHHHHHHG-GGGCHHHHHHHHHHHHHHHHHHHHTSC---SSSCEEHHHHTHHHHHHHHHHH-HHTCCG-GG-----
T ss_pred chHHHHHHHHhh-hhhCHHHHHHHHHHHHHHHHHHHHHhh---cCCCcchHHHHHHHHHHHHHHH-HcCCCH-HH-----
Confidence 999999999985 899999999999999999999999885 35789976665 6899999987 899765 11
Q ss_pred hHHHHHHHHHHHHHhCCCCcccccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCCCCCCCCcHHHHHH
Q 045796 218 TLEMKQLLDDIMELQGVPNISDIFPVLSRFDLQGVERKCKEIALWVEKIFNSAIEKRKNLIAKGTLKFDGRNKDFLQTFI 297 (378)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~~~~~dll~~ll 297 (378)
...+.+..+.+ .. ++..... ...+........+.+++.++++++++ .....|+++.|+
T Consensus 185 ~~~~~~~~~~~----~~------~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~~r~~---------~~~~~dll~~ll 242 (426)
T 3rwl_A 185 RRKLTRWSDVT----TA------APGGGVV---ESWDQRKTELLECAAYFQVLWNERVN---------KDPGNDLISMLA 242 (426)
T ss_dssp THHHHHHHHHH----TC------CTTSSSC---SSHHHHHHHHHHHHHHHHHHHHHHHT---------SCCCSSHHHHHH
T ss_pred HHHHHHHHHHH----Hh------ccCcccc---ccHHHHHHHHHHHHHHHHHHHHHHhh---------cCCCCCHHHHHH
Confidence 22233322211 11 0100011 11234445567788888888887732 123589999999
Q ss_pred hccccCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcCchHHHHHHHHHH
Q 045796 298 EMLDSEDSSISLNRTELIALLLDIILGGTDTTTTIMEWTLTKLLQFPVEMKKVQAELA 355 (378)
Q Consensus 298 ~~~~~~~~~~~l~~~ei~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~iq~kl~~Ei~ 355 (378)
+...+ ..++++||++++.++++||+|||+++|+|++++|++||++|+|+++|++
T Consensus 243 ~~~~~----~~ls~~el~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~lr~E~~ 296 (426)
T 3rwl_A 243 HSPAT----RNMTPEEYLGNVLLLIVGGNDTTRNSMTGGVLALHKNPDQFAKLKANPA 296 (426)
T ss_dssp HCGGG----GGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG
T ss_pred hcccC----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHhChH
Confidence 87542 3589999999999999999999999999999999999999999999863
No 70
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A {Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A*
Probab=99.95 E-value=4e-28 Score=231.85 Aligned_cols=245 Identities=16% Similarity=0.103 Sum_probs=177.2
Q ss_pred CchHHHHHHHHHHhCCceEEecCCccEEEeCCHHHHHHHHHhCCCccCCCCC--ccccc----ccccCCCceeeCCCCch
Q 045796 68 TDLYKSLTKLADAYGPIYKFWLANKLFVVVSSSSIAKEMVRDKDTIFSNRQT--TVATL----TPTLGGNDIVFSPYGAQ 141 (378)
Q Consensus 68 ~~~~~~~~~~~~~yG~i~~~~~g~~~~v~v~dpe~i~~vl~~~~~~f~~r~~--~~~~~----~~~~~~~~~~~~~~g~~ 141 (378)
.+|+.. ++.++||||+++++|+.. ++|++++.+++||.++. |..... ..... .......+.++..+|+.
T Consensus 33 ~~P~~~--~~lr~~gpv~~~~~g~~~-~vv~~~~~v~~vL~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~~ 107 (416)
T 3p3o_A 33 NFSWDS--PEVAEAREKSWIARTPLA-LLVLRYAEADQLARDKR--LISGFRGLVDMVGTPEGPVRDFMVDFLQSLDGAD 107 (416)
T ss_dssp TCCTTS--HHHHHHHHHCSEEECSSS-EEECSHHHHHHHHHCTT--EECSHHHHHHHHTCCSSHHHHHHHHSGGGCCHHH
T ss_pred cCCchH--HHHHHhCCccccccCCCc-eEEeCHHHHHHHHcCcc--cccCCccccccccccccchhhhhcCccccCCchH
Confidence 345555 555789999999987766 89999999999997764 322111 00000 00000012355667999
Q ss_pred HHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHhccCCCCcchH-HhHHHHHHHHHHHHHhcCCCCCCCCcchhHH
Q 045796 142 WRRLRKAMVGEMMTNSSLDSCSALRKQVLKNTIRDLYNNKIGKPVDIG-ELSVSTSVNALENMLWGGGTGSGAHKDHTLE 220 (378)
Q Consensus 142 w~~~Rk~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~d~~-~~~~~~t~dii~~~~fG~~~~~~~~~~~~~~ 220 (378)
|+++||++. ++|++++++.+.+.+++.++++++.+ . ++++|+. ++...+++++||. +||.+.+ ....
T Consensus 108 h~~~Rr~~~-~~fs~~~l~~~~~~i~~~~~~ll~~l-~---~g~~d~~~~~~~~~~~~vi~~-l~G~~~~------~~~~ 175 (416)
T 3p3o_A 108 HRRLRGLAT-HPFTPRRITAVQPFVRSTVEQLIDKL-P---QGDFDFVQHFPHPLPALVMCQ-LLGFPLE------DYDT 175 (416)
T ss_dssp HHHHHHTTC-GGGSHHHHHHHHHHHHHHHHHHHHTC-C---SSSEEHHHHTTTHHHHHHHHH-HHTCCGG------GHHH
T ss_pred HHHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHhh-c---cCCccHHHHHHHHHHHHHHHH-HhCCCHH------HHHH
Confidence 999999985 89999999999999999999999999 4 3458964 5556799999999 5886651 1223
Q ss_pred HHHHHHHHHHHhCCCCcccccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCCCCCCCCcHHHHHHhcc
Q 045796 221 MKQLLDDIMELQGVPNISDIFPVLSRFDLQGVERKCKEIALWVEKIFNSAIEKRKNLIAKGTLKFDGRNKDFLQTFIEML 300 (378)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~~~~~dll~~ll~~~ 300 (378)
+.+....++. .+... ......++..+..+.+.+++.++|+++++. ...|+++.|++..
T Consensus 176 ~~~~~~~~~~---------~~~~~---~~~~~~~~~~~~~~~l~~~~~~~i~~rr~~----------~~~dll~~ll~~~ 233 (416)
T 3p3o_A 176 VGRLSIETNL---------GLALS---NDQDILVKVEQGLGRMFDYLVAAIEKRKVE----------PGDDLTSDIVRAF 233 (416)
T ss_dssp HHHHHHTTCG---------GGTTC---SCHHHHHHHHHHHHHHHHHHHHHHHHHHHS----------CCSSHHHHHHHHH
T ss_pred HHHHHHHHHh---------hcccc---cchhhHHHHHHHHHHHHHHHHHHHHHHHhC----------CCccHHHHHHHhh
Confidence 3332222111 11110 111233555667778888999999888653 2479999999876
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcCchHHHHHHHHHH
Q 045796 301 DSEDSSISLNRTELIALLLDIILGGTDTTTTIMEWTLTKLLQFPVEMKKVQAELA 355 (378)
Q Consensus 301 ~~~~~~~~l~~~ei~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~iq~kl~~Ei~ 355 (378)
.+ + .++++||++++.++++||+|||+++|+|++++|++||++|+|+++|++
T Consensus 234 ~~---~-~ls~~el~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~e~~ 284 (416)
T 3p3o_A 234 HD---G-VLDDYELRTLVATVLVAGYETTNHQLALAMYDFAQHPDQWMKIKENPE 284 (416)
T ss_dssp HT---T-SSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG
T ss_pred cc---C-CCCHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHCHHHHHHHHhCHH
Confidence 53 2 799999999999999999999999999999999999999999999874
No 71
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A*
Probab=99.94 E-value=1.7e-26 Score=219.00 Aligned_cols=244 Identities=10% Similarity=0.082 Sum_probs=178.4
Q ss_pred chHHHHHHHHHHhCCceEEecCCccEEEeCCHHHHHHHHHhCCCccCCCCCcccccccccCCCceeeCCCCchHHHHHHH
Q 045796 69 DLYKSLTKLADAYGPIYKFWLANKLFVVVSSSSIAKEMVRDKDTIFSNRQTTVATLTPTLGGNDIVFSPYGAQWRRLRKA 148 (378)
Q Consensus 69 ~~~~~~~~~~~~yG~i~~~~~g~~~~v~v~dpe~i~~vl~~~~~~f~~r~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~ 148 (378)
+++..+.++++ +|||+++..| .++|++++.+++++... .|+.++...........+. .+++.+|+.|+++||+
T Consensus 21 dp~~~~~~lr~-~~pv~~~~~g---~~~v~~~~~v~~~l~d~--~fs~~~~~~~~~~~~~~~~-~l~~~dg~~h~~~R~~ 93 (394)
T 2wiy_A 21 NPYPWYRRLQQ-DHPVHKLEDG---TYLVSRYADVSHFAKLP--IMSVEPGWADAGPWAVASD-TALGSDPPHHTVLRRQ 93 (394)
T ss_dssp CCHHHHHHHHH-HCSEEECTTS---CEEECCHHHHHHHTTST--TEECHHHHHTCGGGGGGGG-SGGGCCTTHHHHHHHH
T ss_pred CccHHHHHHHh-cCCeEEecCC---eEEEcCHHHHHHHHcCC--Cccccccccccccchhccc-ccccCCchHHHHHHHH
Confidence 56777777755 5899987654 68999999999999653 4554321111111111122 3456689999999999
Q ss_pred HHHhhcCcchhhhhHHHHHHHHHHHHHHHHhccCCCCcchHHhHHHHHHHHHHHHHhcCCCCCCCCcchhHHHHHHHHHH
Q 045796 149 MVGEMMTNSSLDSCSALRKQVLKNTIRDLYNNKIGKPVDIGELSVSTSVNALENMLWGGGTGSGAHKDHTLEMKQLLDDI 228 (378)
Q Consensus 149 l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~d~~~~~~~~t~dii~~~~fG~~~~~~~~~~~~~~~~~~~~~~ 228 (378)
+. ++|++++++.+.+.+++.++++++.+.. ++++|+...+..+++++++..+||.+. . +...+.+.+...
T Consensus 94 ~~-~~fs~~~~~~~~~~i~~~~~~l~~~~~~---~~~~d~~~~~~~~~~~vi~~~~~G~~~-~-----~~~~~~~~~~~~ 163 (394)
T 2wiy_A 94 TN-KWFTPKLVDGWVRTTRELVGDLLDGVEA---GQVIEARRDLAVVPTHVTMARVLQLPE-D-----DADAVMEAMFEA 163 (394)
T ss_dssp HH-TTCSHHHHHHHTHHHHHHHHHHHHTCCT---TCCEEHHHHHTHHHHHHHHHHHHTCCC-C-----CHHHHHHHHHHH
T ss_pred HH-hccCHHHHHHHHHHHHHHHHHHHHHHhc---cCCeeHHHHHHhhhHHHHHHHHcCCCH-h-----HHHHHHHHHHHH
Confidence 85 8999999999999999999999998763 568999999999999999999999765 2 123344433222
Q ss_pred HHHhCCCCcccccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCCCCCCCCcHHHHHHhccccCCCCCC
Q 045796 229 MELQGVPNISDIFPVLSRFDLQGVERKCKEIALWVEKIFNSAIEKRKNLIAKGTLKFDGRNKDFLQTFIEMLDSEDSSIS 308 (378)
Q Consensus 229 ~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~ 308 (378)
+... ...|.. ...++.......+.+++.++|++++.. + .+|+++.|++...+ ..
T Consensus 164 ~~~~------~~~p~~------~~~~~~~~~~~~l~~~~~~~i~~rr~~--------~--~~dll~~Ll~~~~~----~~ 217 (394)
T 2wiy_A 164 MLMQ------SAEPAD------GDVDRAAVAFGYLSARVAEMLEDKRVN--------P--GDGLADSLLDAARA----GE 217 (394)
T ss_dssp HGGG------SSSCCT------THHHHHHHHHHHHHHHHHHHHHHHHHS--------C--CSSHHHHHHHHHHT----TS
T ss_pred HHhc------cCCccc------hHHHHHHHHHHHHHHHHHHHHHHhhcC--------C--CCcHHHHHHHhhhc----CC
Confidence 2110 011211 112334445566778888888877642 1 36899999986532 25
Q ss_pred CCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcCchHHHHHHHHHH
Q 045796 309 LNRTELIALLLDIILGGTDTTTTIMEWTLTKLLQFPVEMKKVQAELA 355 (378)
Q Consensus 309 l~~~ei~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~iq~kl~~Ei~ 355 (378)
++++|+++++.++++||+|||+++|+|++++|++||++|+|+++|++
T Consensus 218 ls~~el~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~e~~ 264 (394)
T 2wiy_A 218 ITESEAIATILVFYAVGHMAIGYLIASGIELFARRPEVFTAFRNDES 264 (394)
T ss_dssp SCHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHCHHHHHHHHHCGG
T ss_pred CCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHCHHHHHHHHhChH
Confidence 99999999999999999999999999999999999999999999874
No 72
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A*
Probab=99.94 E-value=1.2e-26 Score=216.10 Aligned_cols=220 Identities=16% Similarity=0.131 Sum_probs=157.9
Q ss_pred HHhCCceEEecCCccEEEeCCHHHHHHHHHhCCCccCCCCCcccccccccCCCceeeCCCCchHHHHHHHHHHhhcCcch
Q 045796 79 DAYGPIYKFWLANKLFVVVSSSSIAKEMVRDKDTIFSNRQTTVATLTPTLGGNDIVFSPYGAQWRRLRKAMVGEMMTNSS 158 (378)
Q Consensus 79 ~~yG~i~~~~~g~~~~v~v~dpe~i~~vl~~~~~~f~~r~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~l~~~~fs~~~ 158 (378)
++||||+++ | .++|+||+.+++||.++ ..|++++...... .++.+++ ..+|+.|+++||++. ++|+++.
T Consensus 2 r~~gpv~~~--g---~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~---~~~~~l~-~~~g~~~~~~R~~~~-~~fs~~~ 70 (343)
T 2rfb_A 2 RLNDPVHYD--G---AWHVYKYSDVKHVLMND-KIFSSNPGNRYSN---AGGISFI-TMDNPEHKEFRDISA-PYFLPSK 70 (343)
T ss_dssp -CCCCEEET--T---EEEECSHHHHHHHHHCT-TTEESSCSSCCC------CCGGG-GCCHHHHHHHHHHHH-HHHSHHH
T ss_pred CCcCCeeee--C---eEEEcCHHHHHHHHhCh-hhcccCCcCCCCC---ccccccc-cCCchHHHHHHHHhh-hhcCHHH
Confidence 589999976 3 89999999999999876 3687776321111 1234444 457999999999985 8999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHhccCCCCcchHHhH-HHHHHHHHHHHHhcCCCCCCCCcchhHHHHHHHHHHHHHhCCCCc
Q 045796 159 LDSCSALRKQVLKNTIRDLYNNKIGKPVDIGELS-VSTSVNALENMLWGGGTGSGAHKDHTLEMKQLLDDIMELQGVPNI 237 (378)
Q Consensus 159 l~~~~~~~~~~~~~l~~~l~~~~~~~~~d~~~~~-~~~t~dii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (378)
++.+.+.++++++++++.|. ++|+...+ ..+++|+++++ ||.+.+ ...++.+....++..
T Consensus 71 l~~~~~~i~~~~~~l~~~l~------~~d~~~~~~~~~~~~vi~~~-~G~~~~------~~~~~~~~~~~~~~~------ 131 (343)
T 2rfb_A 71 INDYKDFIEETSNDLIKNID------NKDIISEYAVRLPVNIISKI-LGIPDS------DMPLFKLWSDYIIGN------ 131 (343)
T ss_dssp HGGGHHHHHHHHHHHHTTCT------TSCHHHHTTTHHHHHHHHHH-HTCCGG------GHHHHHHHHHHHHTS------
T ss_pred HHHHHHHHHHHHHHHHHhcc------ccCHHHHHhhhhhHHHHHHH-cCCCHH------HHHHHHHHHHHHhhc------
Confidence 99999999999999988764 68988755 89999999998 997762 123444444433321
Q ss_pred ccccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCCCCCCCCcHHHHHHhccccCCCCCCCCHHHHHHH
Q 045796 238 SDIFPVLSRFDLQGVERKCKEIALWVEKIFNSAIEKRKNLIAKGTLKFDGRNKDFLQTFIEMLDSEDSSISLNRTELIAL 317 (378)
Q Consensus 238 ~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~ei~~~ 317 (378)
..|.+. ..++. +..+.+.+++.+++ ..| ++.|++...+ +..++++++.++
T Consensus 132 --~~p~~~------~~~~~-~~~~~~~~~~~~~i-----------------~~d-l~~ll~~~~~---~~~l~~~ei~~~ 181 (343)
T 2rfb_A 132 --KRDENF------NYVNN-RMVSRLLEIFKSDS-----------------HGI-INVLAGSSLK---NRKLTMDEKIKY 181 (343)
T ss_dssp --CCSSHH------HHHHH-HHHHHHHHHHHSCC-----------------SSH-HHHHHTCBCS---SSBCCHHHHHHH
T ss_pred --cCcchh------hHHHH-HHHHHHHHHHHHHH-----------------hcc-HHHHHhhhcC---CCCCCHHHHHHH
Confidence 012210 01111 22222222221111 367 9999986432 446999999999
Q ss_pred HHHHHhhcccchHHHHHHHHHHHhcCchHHHHHHHHHHHhh
Q 045796 318 LLDIILGGTDTTTTIMEWTLTKLLQFPVEMKKVQAELAEVV 358 (378)
Q Consensus 318 ~~~~~~AG~dTTa~tl~~~l~~L~~~P~iq~kl~~Ei~~~~ 358 (378)
+.++++||+|||+++|+|++++|++||++|+|+++|+++++
T Consensus 182 ~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~a~i 222 (343)
T 2rfb_A 182 IMLLIIGGNETTTNLIGNMIRVIDENPDIIDDALKNRSGFV 222 (343)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHCHHHHH
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHcCcHHHH
Confidence 99999999999999999999999999999999999885543
No 73
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A*
Probab=99.94 E-value=2.2e-26 Score=216.23 Aligned_cols=227 Identities=15% Similarity=0.135 Sum_probs=167.9
Q ss_pred HHHHHHHHHHhCCceEEecCCccEEEeCCHHHHHHHHHhCCCccCCCCCcc--cc-----c-ccccC---CCceeeCCCC
Q 045796 71 YKSLTKLADAYGPIYKFWLANKLFVVVSSSSIAKEMVRDKDTIFSNRQTTV--AT-----L-TPTLG---GNDIVFSPYG 139 (378)
Q Consensus 71 ~~~~~~~~~~yG~i~~~~~g~~~~v~v~dpe~i~~vl~~~~~~f~~r~~~~--~~-----~-~~~~~---~~~~~~~~~g 139 (378)
+..+.++ ++||||+++. | .++++||+.+++||.+. ..|++++... .. . .. .+ +.+++ ..+|
T Consensus 2 ~~~~~~l-r~~gpv~~~~-g---~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~-~~dg 73 (367)
T 3b4x_A 2 YDWFKQM-RKESPVYYDG-K---VWNLFKYEDCKMVLNDH-KRFSSNLTGYNDKLEMLRSGKVF-FDIPTRYTML-TSDP 73 (367)
T ss_dssp HHHHHHH-HHHCSEEECS-S---SEEECSHHHHHHHHHCT-TTEECCCSSTTTTHHHHHHTCCC-CCCGGGSSGG-GCCT
T ss_pred CHHHHHH-HHcCCceeeC-C---EEEEecHHHHHHHHcCc-hhhccCcccccccccccccccch-hhcccccccc-cCCc
Confidence 4566677 5799999987 4 79999999999999875 3677764211 11 1 11 12 14454 4469
Q ss_pred chHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHhccCCCCcchHHhH-HHHHHHHHHHHHhcCCCCCCCCcchh
Q 045796 140 AQWRRLRKAMVGEMMTNSSLDSCSALRKQVLKNTIRDLYNNKIGKPVDIGELS-VSTSVNALENMLWGGGTGSGAHKDHT 218 (378)
Q Consensus 140 ~~w~~~Rk~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~d~~~~~-~~~t~dii~~~~fG~~~~~~~~~~~~ 218 (378)
+.|+++||++. ++|++++++. +.+++.++++++.|. | ++|+...+ ..+++|+|+. +||.+ + +.
T Consensus 74 ~~h~~~R~~~~-~~fs~~~l~~--~~i~~~~~~l~~~l~----g-~~d~~~~~~~~~~~~vi~~-~~G~~-~------~~ 137 (367)
T 3b4x_A 74 PLHDELRNLTA-DAFNPSNLPV--DFVREVTVKLLSELD----E-EFDVIESFAIPLPILVISK-MLGIN-P------DV 137 (367)
T ss_dssp THHHHHHHTTG-GGGSGGGSCH--HHHHHHHHHHHHTCC----S-EEEHHHHTTTHHHHHHHHH-HHTCC-C------CH
T ss_pred hhHHHHHHHHH-HhcCHhhhcc--hHHHHHHHHHHHhcc----C-CcchHHHHHHhhHHHHHHH-HcCCC-C------cH
Confidence 99999999985 8999999988 999999999998875 3 49998655 7999999999 79976 3 12
Q ss_pred HHHHHHHHHHHHHhCCCCcccccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCCCCCCCCcHHHHHHh
Q 045796 219 LEMKQLLDDIMELQGVPNISDIFPVLSRFDLQGVERKCKEIALWVEKIFNSAIEKRKNLIAKGTLKFDGRNKDFLQTFIE 298 (378)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~~~~~dll~~ll~ 298 (378)
.++.+..+.++.... ..|.. . +.. ...+.+.+++.++|+++++. ...|+++.|++
T Consensus 138 ~~~~~~~~~~~~~~~------~~p~~--~------~~~-~~~~~~~~~~~~~i~~r~~~----------~~~dll~~ll~ 192 (367)
T 3b4x_A 138 KKVKDWSDLVALRLG------RADEI--F------SIG-RKYLELISFSKKELDSRKGK----------EIVDLTGKIAN 192 (367)
T ss_dssp HHHHHHHHHHHTTTT------STTGG--G------CCC-HHHHHHHHHHHHHHHHHTTT----------CCSSHHHHHHT
T ss_pred HHHHHHHHHHHhccC------CChhh--H------HHH-HHHHHHHHHHHHHHHHHhcC----------CCCCHHHHHHh
Confidence 345555444432211 12221 1 111 34456677788888776431 24799999997
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcCchHHHHHHHHHH
Q 045796 299 MLDSEDSSISLNRTELIALLLDIILGGTDTTTTIMEWTLTKLLQFPVEMKKVQAELA 355 (378)
Q Consensus 299 ~~~~~~~~~~l~~~ei~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~iq~kl~~Ei~ 355 (378)
. .++++|+++++.++++||+|||+++|+|++++|++ |++|+|+++|++
T Consensus 193 ~--------~ls~~el~~~~~~l~~AG~eTt~~~l~~~l~~L~~-P~~~~~l~~e~~ 240 (367)
T 3b4x_A 193 S--------NLSELEKEGYFILLMIAGNETTTNLIGNAIEDFTL-YNSWDYVREKGA 240 (367)
T ss_dssp S--------SSCHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHH-TTCHHHHHHHCS
T ss_pred c--------cCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhC-HHHHHHHHhCCc
Confidence 4 58899999999999999999999999999999999 999999999974
No 74
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.50A {Sulfolobus solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A* 1io9_A* 1io8_A*
Probab=99.94 E-value=7.3e-26 Score=212.73 Aligned_cols=225 Identities=13% Similarity=0.190 Sum_probs=163.9
Q ss_pred HHHHHHHHHHhCCceEEecCCccEEEeCCHHHHHHHHHhCCCccCCCCC--c--cc-c--cc--ccc-CCCceeeCCCCc
Q 045796 71 YKSLTKLADAYGPIYKFWLANKLFVVVSSSSIAKEMVRDKDTIFSNRQT--T--VA-T--LT--PTL-GGNDIVFSPYGA 140 (378)
Q Consensus 71 ~~~~~~~~~~yG~i~~~~~g~~~~v~v~dpe~i~~vl~~~~~~f~~r~~--~--~~-~--~~--~~~-~~~~~~~~~~g~ 140 (378)
+..+.++ ++||||+++ | +.++++||+.+++||.+. ..|++++. . .. . .. ... .|.++ +..+|+
T Consensus 2 ~~~~~~l-r~~Gpv~~~--g--~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~g~ 74 (368)
T 1io7_A 2 YDWFSEM-RKKDPVYYD--G--NIWQVFSYRYTKEVLNNF-SKFSSDLTGYHERLEDLRNGKIRFDIPTRYTM-LTSDPP 74 (368)
T ss_dssp HHHHHHH-HHHCSEEEC--S--SCEEECSHHHHHHHHHCT-TTEECCCSSHHHHHHHHTTTCCCCSCGGGSSG-GGCCTT
T ss_pred CHHHHHH-HhcCCeEeE--C--CEEEEecHHHHHHHHcCc-cccccccccccccccccccccccccccccccc-ccCCCh
Confidence 5567777 589999987 4 589999999999999875 46887764 1 11 0 01 110 11344 445799
Q ss_pred hHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHhccCCCCcchHHhH-HHHHHHHHHHHHhcCCCCCCCCcchhH
Q 045796 141 QWRRLRKAMVGEMMTNSSLDSCSALRKQVLKNTIRDLYNNKIGKPVDIGELS-VSTSVNALENMLWGGGTGSGAHKDHTL 219 (378)
Q Consensus 141 ~w~~~Rk~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~d~~~~~-~~~t~dii~~~~fG~~~~~~~~~~~~~ 219 (378)
.|+++||++. ++|+++.++.+.+.++++++++++.| + .| ++|+...+ ..+++|+++++ ||.+.+ ...
T Consensus 75 ~h~~~R~~~~-~~f~~~~~~~~~~~i~~~~~~l~~~l-~--~g-~~d~~~~~~~~~~~~vi~~~-~G~~~~------~~~ 142 (368)
T 1io7_A 75 LHDELRSMSA-DIFSPQKLQTLETFIRETTRSLLDSI-D--PR-EDDIVKKLAVPLPIIVISKI-LGLPIE------DKE 142 (368)
T ss_dssp HHHHHHGGGT-TTTCHHHHHHHHHHHHHHHHHHHHTC-C--TT-SEEHHHHTTTHHHHHHHHHH-HTCCGG------GHH
T ss_pred HHHHHHHHHH-hhcCHHHHHHHHHHHHHHHHHHHHHh-h--cC-CccHHHHHHHHHHHHHHHHH-hCCCHH------HHH
Confidence 9999999985 89999999999999999999999999 4 34 79998866 78999999999 998762 112
Q ss_pred HHHHHHHHHHHHhCCCCcccccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCCCCCCCCcHHHHHHhc
Q 045796 220 EMKQLLDDIMELQGVPNISDIFPVLSRFDLQGVERKCKEIALWVEKIFNSAIEKRKNLIAKGTLKFDGRNKDFLQTFIEM 299 (378)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~~~~~dll~~ll~~ 299 (378)
.+.+....++ .. .. .|. ..++..+..+.+.+++.+++ . . ..|+++.|++.
T Consensus 143 ~~~~~~~~~~----~~-~~--~p~--------~~~~~~~~~~~~~~~~~~~i-----~--------~--~~d~l~~ll~~ 192 (368)
T 1io7_A 143 KFKEWSDLVA----FR-LG--KPG--------EIFELGKKYLELIGYVKDHL-----N--------S--GTEVVSRVVNS 192 (368)
T ss_dssp HHHHHGGGCT----TS-CC--CTT--------CHHHHHHHHHHHHHHHHHHT-----T--------S--SCHHHHHHHTS
T ss_pred HHHHHHHHHH----hc-cC--ChH--------HHHHHHHHHHHHHHHHHHHh-----C--------C--CCCHHHHHHhc
Confidence 2322211110 00 00 121 11333444455555555554 1 1 36899999964
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcCchHHHHHHHH
Q 045796 300 LDSEDSSISLNRTELIALLLDIILGGTDTTTTIMEWTLTKLLQFPVEMKKVQAE 353 (378)
Q Consensus 300 ~~~~~~~~~l~~~ei~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~iq~kl~~E 353 (378)
.++++|+.+++.++++||+|||+++++|++++|++|| +|+|+++|
T Consensus 193 --------~l~~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P-~~~~l~~E 237 (368)
T 1io7_A 193 --------NLSDIEKLGYIILLLIAGNETTTNLISNSVIDFTRFN-LWQRIREE 237 (368)
T ss_dssp --------SCCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTT-CHHHHHHH
T ss_pred --------cCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCh-HHHHHHhc
Confidence 5889999999999999999999999999999999999 99999999
No 75
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A*
Probab=99.91 E-value=9e-24 Score=201.36 Aligned_cols=257 Identities=14% Similarity=0.181 Sum_probs=165.4
Q ss_pred CCCcccccccC---CCCchHHHHHHHHHHhCCceEEecCCccEEEeCCHHHHHHHHHhCCCccCCCCCcccc---ccccc
Q 045796 55 RGLPLVGYLPF---LGTDLYKSLTKLADAYGPIYKFWLANKLFVVVSSSSIAKEMVRDKDTIFSNRQTTVAT---LTPTL 128 (378)
Q Consensus 55 ~~~p~lG~~~~---l~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~v~dpe~i~~vl~~~~~~f~~r~~~~~~---~~~~~ 128 (378)
.++|.+|--.. +..+|+..+.++. ++|||+++ ++.+..+|++++.+++||.+.. .|+........ .....
T Consensus 18 ~~~P~~~~dp~~~~~~~dP~~~~~~lR-~~gPV~~~--~~~~~~~vt~~~~v~~vl~d~~-~fs~~~~~~~~~~~~~~~~ 93 (412)
T 4dnj_A 18 AGVPHLGIDPFALDYFADPYPEQETLR-EAGPVVYL--DKWNVYGVARYAEVYAVLNDPL-TFCSSRGVGLSDFKKEKPW 93 (412)
T ss_dssp TTSCEECCCTTSHHHHHSCHHHHHHHH-HHCSSEEE--TTTTEEEECSHHHHHHHHTCTT-TEESTTCSSSSCTTTSCCS
T ss_pred CCCCccCCCCCCHHHHhCcHHHHHHHH-hcCCEEEE--CCCCEEEECCHHHHHHHHcCCc-cccCCCccccccccccccc
Confidence 45787763221 1246677777774 58999865 4556889999999999996543 45432211111 11111
Q ss_pred CCCceeeCCCCchHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHhccCCCCcch-HHhHHHHHHHHHHHHHhcC
Q 045796 129 GGNDIVFSPYGAQWRRLRKAMVGEMMTNSSLDSCSALRKQVLKNTIRDLYNNKIGKPVDI-GELSVSTSVNALENMLWGG 207 (378)
Q Consensus 129 ~~~~~~~~~~g~~w~~~Rk~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~d~-~~~~~~~t~dii~~~~fG~ 207 (378)
...+.++..+|+.|+++||++. ++|++++++.+.+.+++.++++++.+.. .++++|+ .++...+++++++.+. |.
T Consensus 94 ~~~~~~~~~Dg~~H~r~R~~~~-~~Fs~~~l~~~~~~i~~~~~~l~~~~~~--~~~~~D~v~~~~~~~~~~~i~~l~-g~ 169 (412)
T 4dnj_A 94 RPPSLILEADPPAHTRTRAVLS-KVLSPATMKRLRDGFAAAADAKIDELLA--RGGNIDAIADLAEAYPLSVFPDAM-GL 169 (412)
T ss_dssp SCCCTTTTCCTTHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHHHHHHHH--TTSEEETCCCCCCHHHHHHHHHHH-TC
T ss_pred cCCCccccCChHHHHHHHhhcc-cccCHHHHHHhhHHHHHHHHHHHHhhhc--cCCCceeHHHHHhhhhHhHHHHHc-CC
Confidence 1234456678999999999985 8999999999999999999999999876 3556764 5666788899998864 54
Q ss_pred CCCCCCCcchhHHHHHHHHHHHHHhCCCCcccccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCCCCC
Q 045796 208 GTGSGAHKDHTLEMKQLLDDIMELQGVPNISDIFPVLSRFDLQGVERKCKEIALWVEKIFNSAIEKRKNLIAKGTLKFDG 287 (378)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~~ 287 (378)
.. ... ..+......++..... . ....+....... .+...+.++.+.. .
T Consensus 170 ~~-~~~-----~~~~~~~~~~~~~~~~------------~--~~~~~~~~~~~~----~~~~~~~~~~~~~-------~- 217 (412)
T 4dnj_A 170 KQ-EGR-----ENLLPYAGLVFNAFGP------------P--NELRQSAIERSA----PHQAYVAEQCQRP-------N- 217 (412)
T ss_dssp CS-TTG-----GGHHHHHHHHHHHTSC------------S--SHHHHHHHHTCH----HHHHHHHHHTSGG-------G-
T ss_pred ch-hhh-----hhhhhhhhcccccccc------------c--HHHHHHHHHHHH----HHHHHHHHHHHhh-------c-
Confidence 33 111 1222333333322111 0 000111111111 1222222222221 1
Q ss_pred CCCcHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcCchHHHHHHHHH
Q 045796 288 RNKDFLQTFIEMLDSEDSSISLNRTELIALLLDIILGGTDTTTTIMEWTLTKLLQFPVEMKKVQAEL 354 (378)
Q Consensus 288 ~~~dll~~ll~~~~~~~~~~~l~~~ei~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~iq~kl~~Ei 354 (378)
...|.++.++....+ +..++++|+++++.++++||+|||+++|+|++|+|++||++|+||++|.
T Consensus 218 ~~~~~~~~l~~~~~~---~~~l~~~e~~~~~~~l~~AG~eTTa~~l~~~~~~L~~~P~~~~~Lr~~~ 281 (412)
T 4dnj_A 218 LAPGGFGACIHAFSD---TGEITPEEAPLLVRSLLSAGLDTTVNGIAAAVYCLARFPDEFARLRADP 281 (412)
T ss_dssp SCTTSHHHHHHHTTT---TTSSCTTHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHCHHHHHHHHHCG
T ss_pred cccccchhhhHhhhh---ccchhHHHHHHHHHHHHhccchhHHHHHHHHHHHHhhCHHHHHHHHhCc
Confidence 123445556654432 5679999999999999999999999999999999999999999999985
No 76
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A*
Probab=99.89 E-value=1.6e-21 Score=185.93 Aligned_cols=251 Identities=10% Similarity=0.087 Sum_probs=171.9
Q ss_pred CchHHHHHHHHHHhC-CceEEecCCccEEEeCCHHHHHHHHHhCCCccCCCCCcccccccccCCCceeeCCCCchHHHHH
Q 045796 68 TDLYKSLTKLADAYG-PIYKFWLANKLFVVVSSSSIAKEMVRDKDTIFSNRQTTVATLTPTLGGNDIVFSPYGAQWRRLR 146 (378)
Q Consensus 68 ~~~~~~~~~~~~~yG-~i~~~~~g~~~~v~v~dpe~i~~vl~~~~~~f~~r~~~~~~~~~~~~~~~~~~~~~g~~w~~~R 146 (378)
..+|..+.++.+..+ +++..-.++ ..-+|+..+.+++|+... ..|+.+........ .......+...+|+.|+++|
T Consensus 37 ~~~~~~~~~lr~~~~~~~~~~~~~g-g~W~vtr~~dv~~vl~d~-~~fs~~~~~~~~~~-~~~~~~~~~~~D~p~H~r~R 113 (417)
T 4dxy_A 37 DGYHEAWKKVQHPGIPDLIWTPFTG-GHWIATNGDTVKEVYSDP-TRFSSEVIFLPKEA-GEKAQMVPTKMDPPEHTPYR 113 (417)
T ss_dssp GCHHHHHHHHSCTTCCSEEEESSTT-SEEEECSHHHHHHHHTCT-TTEESSCCSSSTTS-SCSSCTTTTTCCTTTHHHHH
T ss_pred cChHHHHHHHHhhCCCCEEecCCCC-CEEEECCHHHHHHHHcCc-hhccCCCccccccc-ccccccCcccCCcHHHHHHH
Confidence 356777777765544 455443333 345789999999999654 35765432211111 11122334455799999999
Q ss_pred HHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHhccCCCCcchHH-hHHHHHHHHHHHHHhcCCCCCCCCcchhHHHHHHH
Q 045796 147 KAMVGEMMTNSSLDSCSALRKQVLKNTIRDLYNNKIGKPVDIGE-LSVSTSVNALENMLWGGGTGSGAHKDHTLEMKQLL 225 (378)
Q Consensus 147 k~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~d~~~-~~~~~t~dii~~~~fG~~~~~~~~~~~~~~~~~~~ 225 (378)
|+++ ++||+++++.++|.+++.++++++.+.. ++++|+.. +...+++.+++.+ +|.... ....+.+..
T Consensus 114 rll~-~~Fs~~~l~~~~~~i~~~~~~lld~l~~---~g~~D~v~~~a~~l~~~vi~~l-lg~~~~------d~~~~~~~~ 182 (417)
T 4dxy_A 114 KALD-KGLNLAKIRKVEDKVREVASSLIDSFAA---RGECDFAAEYAELFPVHVFMAL-ADLPLE------DIPVLSEYA 182 (417)
T ss_dssp HHHH-HHHCHHHHHTTHHHHHHHHHHHHHHHHT---TSEEEHHHHTTTTHHHHHHHHH-TTCCGG------GHHHHHHHH
T ss_pred HHhh-hhcCHHHHHHHHHHHHHHHHHHHHHhhh---cCCeeeHHHHHhhhHHHHHHHH-cCCCHH------HHHHHHhhh
Confidence 9985 8999999999999999999999999975 45777644 4456777777764 565431 123343333
Q ss_pred HHHHHHhCCCCcccccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCCCCCCCCcHHHHHHhccccCCC
Q 045796 226 DDIMELQGVPNISDIFPVLSRFDLQGVERKCKEIALWVEKIFNSAIEKRKNLIAKGTLKFDGRNKDFLQTFIEMLDSEDS 305 (378)
Q Consensus 226 ~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~ 305 (378)
..+.. .. . ..+ .............+..++.+++++|++ ....|+++.|+....+
T Consensus 183 ~~~~~---~~-------~--~~~-~~~~~~~~~~~~~~~~~~~~li~~rr~----------~~~ddl~s~L~~~~~~--- 236 (417)
T 4dxy_A 183 RQMTR---PE-------G--NTP-EEMATDLEAGNNGFYAYVDPIIRARVG----------GDGDDLITLMVNSEIN--- 236 (417)
T ss_dssp HHHHS---CC-------C--SSH-HHHHHHHHHHHHHHHHHHHHHHHHHTT----------CCCCSHHHHHHTCEET---
T ss_pred hhhcc---cc-------c--cCh-HHHHHHHHHHHHHHHHHHHHHHHHHhc----------CCccchhhhhcccccc---
Confidence 32221 00 0 000 111233444556677777777776643 2357999999987653
Q ss_pred CCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcCchHHHHHHHHHHHhh
Q 045796 306 SISLNRTELIALLLDIILGGTDTTTTIMEWTLTKLLQFPVEMKKVQAELAEVV 358 (378)
Q Consensus 306 ~~~l~~~ei~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~iq~kl~~Ei~~~~ 358 (378)
+..++++++.+++..+++||+|||+++|+|++++|++||++|+|+++|...+.
T Consensus 237 ~~~~~~~e~~~~~~~ll~AG~eTTa~~l~~~~~~L~~~P~~~~~l~~e~~~~~ 289 (417)
T 4dxy_A 237 GERIAHDKAQGLISLLLLGGLDTVVNFLSFFMIHLARHPELVAELRSDPLKLM 289 (417)
T ss_dssp TEECCHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTCHHHHHHHHHCHHHHH
T ss_pred CCccchhHHHHHHHHHHhhcccchhhHHHHHHHHHHhCchhhhhhccCccccc
Confidence 56799999999999999999999999999999999999999999999986654
No 77
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=99.46 E-value=2.5e-16 Score=147.45 Aligned_cols=205 Identities=10% Similarity=0.051 Sum_probs=123.4
Q ss_pred CCCC-CCCCcccccccC-----CCCchHHHHHHHHHHhCCceEEecCCccEEEeCCHHHHHHHHHhCCCccCCCCCcccc
Q 045796 50 LPPG-PRGLPLVGYLPF-----LGTDLYKSLTKLADAYGPIYKFWLANKLFVVVSSSSIAKEMVRDKDTIFSNRQTTVAT 123 (378)
Q Consensus 50 ~~Pg-P~~~p~lG~~~~-----l~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~v~dpe~i~~vl~~~~~~f~~r~~~~~~ 123 (378)
.||| |++||++|+... +..+++..+.+++++ ||++.. .+.+++++++.+++||.+. .|++++.....
T Consensus 35 ~ppG~~~~~P~~G~~~~~~~~~~~~dp~~~~~~lr~~--pV~~~~---~~~~vv~~~~~v~~vl~d~--~f~~~~~~~~~ 107 (381)
T 2yjn_B 35 MIRGLHWGYGSNGDPYPMLLCGHDDDPQRRYRSMRES--GVRRSR---TETWVVADHATARQVLDDP--AFTRATGRTPE 107 (381)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHTCCSCCHHHHHHHHHH--CEEECS---SSCEEECSHHHHHHHHHCS--SEESSCCCCCH
T ss_pred CCCcccccccccCCchhhcCchhccCchHHHHHHHhC--CceeCC---CCEEEEcCHHHHHHHHcCC--CcCCCcccccc
Confidence 4677 557899997643 345678888898865 999765 3589999999999999863 57655421100
Q ss_pred c------ccccCCCceeeCCCCchHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHHhccCCCCcchHHhH-HHHH
Q 045796 124 L------TPTLGGNDIVFSPYGAQWRRLRKAMVGEMMTNSSLDSCSALRKQVLKNTIRDLYNNKIGKPVDIGELS-VSTS 196 (378)
Q Consensus 124 ~------~~~~~~~~~~~~~~g~~w~~~Rk~l~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~d~~~~~-~~~t 196 (378)
. .....+.+++ ..+|+.| .++|+ . .+.+++.++++++.|. +++|+...+ ..++
T Consensus 108 ~~~~~~~~~~~~~~~l~-~~dg~~H--------~~~Ft-----~-~~~i~~~~~~ll~~~~-----g~~Dl~~~~a~~l~ 167 (381)
T 2yjn_B 108 WMRAAGAPPAEWAQPFR-DVHAASW--------EGEVP-----D-VGELAESFAGLLPGAG-----ARLDLVGDFAWQVP 167 (381)
T ss_dssp HHHHHTCCHHHHTHHHH-HHHHCCC--------CSCCC-----C-CSCHHHHTSTTSCC-----------CCCCCCTHHH
T ss_pred cccccccccchhhhhhh-hCCchhh--------hhccC-----C-hHHHHHHHHHHHHhcc-----CcchHHHHHHHHHH
Confidence 0 0000122333 3458888 36788 3 6778888888888775 368887665 6999
Q ss_pred HHHHHHHHhcCCCCCCCCcchhHHHHHHHHHHHHHhCCCCcccccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHH
Q 045796 197 VNALENMLWGGGTGSGAHKDHTLEMKQLLDDIMELQGVPNISDIFPVLSRFDLQGVERKCKEIALWVEKIFNSAIEKRKN 276 (378)
Q Consensus 197 ~dii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~ 276 (378)
+++||++ ||.+.+ . . ++.+.+..... .+ +.... .++. .+...
T Consensus 168 ~~vi~~l-~G~~~~-~-----~-~~~~~~~~~~~----------~~----~~~~~-~~~~---------------~~~~~ 209 (381)
T 2yjn_B 168 VQGMTAV-LGAAGV-L-----R-GAAWDARVSLD----------AQ----LSPQQ-LAVT---------------EAAVA 209 (381)
T ss_dssp HHHHHTC------C-C-----H-HHHHHHTTHHH----------HT----TSCCC-HHHH---------------HHHHH
T ss_pred HHHHHHH-cCCCHH-H-----H-HHHHHHHHhcc----------CC----CCHHH-HHHH---------------HHHHH
Confidence 9999995 997762 1 1 22211110000 00 00000 0000 00000
Q ss_pred hhhhCCCCCCCCCCcHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcCchHHHHHHHHH
Q 045796 277 LIAKGTLKFDGRNKDFLQTFIEMLDSEDSSISLNRTELIALLLDIILGGTDTTTTIMEWTLTKLLQFPVEMKKVQAEL 354 (378)
Q Consensus 277 ~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~ei~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~iq~kl~~Ei 354 (378)
. |+ + +++..+++||+|||+++++|++++|++||++|+|+++|+
T Consensus 210 ~------------------l~-------------~----~~~~~ll~aG~eTt~~~l~~~l~~L~~~P~~~~~l~~e~ 252 (381)
T 2yjn_B 210 A------------------LP-------------A----DPALRALFAGAEMTANTVVDAVLAVSAEPGLAERIADDP 252 (381)
T ss_dssp H------------------CC-------------------CHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCC
T ss_pred H------------------HH-------------H----HHHHHHHHHhhhHHHHHHHHHHHHHHHCHHHHHHHhhCH
Confidence 0 00 0 778999999999999999999999999999999999985
No 78
>2diu_A KIAA0430 protein; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=79.86 E-value=4 Score=29.20 Aligned_cols=62 Identities=13% Similarity=0.142 Sum_probs=45.2
Q ss_pred cccccccCC-C-CchHHHHHHHHHHhC-CceEEecCCccEEEeCCHHHHHHHHHh-CCCccCCCCCc
Q 045796 58 PLVGYLPFL-G-TDLYKSLTKLADAYG-PIYKFWLANKLFVVVSSSSIAKEMVRD-KDTIFSNRQTT 120 (378)
Q Consensus 58 p~lG~~~~l-~-~~~~~~~~~~~~~yG-~i~~~~~g~~~~v~v~dpe~i~~vl~~-~~~~f~~r~~~ 120 (378)
-+++|+..= . ......+.++..+|| +|..+ .||.-+|...+.+.++..+.. ++..+.+|+..
T Consensus 12 lYV~NL~~~~~~~~lk~~L~~lF~~yGG~Vl~V-tgG~AfV~F~~~esA~~A~~~l~G~~l~gr~i~ 77 (96)
T 2diu_A 12 LYVYNLPANKDGKSVSNRLRRLSDNCGGKVLSI-TGCSAILRFINQDSAERAQKRMENEDVFGNRII 77 (96)
T ss_dssp EEEESCCTTSCHHHHHHHHHHHHHTTTCCEEEC-CTTCEEEEESSHHHHHHHHHHHTTCCSSSSCCE
T ss_pred EEEeCCCCcCCHHHHHHHHHHHHHHcCCeeEEE-ecCEEEEEECCHHHHHHHHHHhcCCccCCceEE
Confidence 347888764 2 234566889999995 99888 568889999999999999864 44445556543
No 79
>2krb_A Eukaryotic translation initiation factor 3 subunit B; EIF3, eukaryotic initiation factor, EIF3B, EIF3J; NMR {Homo sapiens}
Probab=76.52 E-value=12 Score=25.17 Aligned_cols=58 Identities=21% Similarity=0.379 Sum_probs=39.0
Q ss_pred ccccccCCCCc----hHHHHHHHHHHhCCceEEecC-------CccEEEeCCHHHHHHHHHh-CCCccCC
Q 045796 59 LVGYLPFLGTD----LYKSLTKLADAYGPIYKFWLA-------NKLFVVVSSSSIAKEMVRD-KDTIFSN 116 (378)
Q Consensus 59 ~lG~~~~l~~~----~~~~~~~~~~~yG~i~~~~~g-------~~~~v~v~dpe~i~~vl~~-~~~~f~~ 116 (378)
++||+..-... ....+.++..+||+|..+.+. |.-+|-..+++.++..+.. ++..+.+
T Consensus 5 ~V~nLp~~~~~~~~~t~~~l~~~F~~~G~i~~v~i~~~~g~~~g~afV~f~~~~~A~~Ai~~lng~~~~g 74 (81)
T 2krb_A 5 VVDNVPQVGPDRLEKLKNVIHKIFSKFGKITNDFYPEEDGKTKGYIFLEYASPAHAVDAVKNADGYKLDK 74 (81)
T ss_dssp EEESCCCCCTTTHHHHHHHHHHHHHTTCCEEEEECCCBTTBCCCEEEEEESSHHHHHHHHTTSSSCCCSS
T ss_pred EEeCCCCCcHHHHHHHHHHHHHHHhhcCCeEEEEecCCCCcEeEEEEEEECCHHHHHHHHHHhcCcccCC
Confidence 35666543211 346788888999999888764 2346888899999999864 3333433
No 80
>3lqv_A PRE-mRNA branch site protein P14; cysless mutant, PRE-mRNA splicing, adenine, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: ADE; 2.38A {Homo sapiens} SCOP: d.58.7.1 PDB: 2f9d_A 2f9j_A 2fho_B
Probab=74.16 E-value=14 Score=26.78 Aligned_cols=64 Identities=23% Similarity=0.334 Sum_probs=43.2
Q ss_pred CCCCCCCCcccccccCCCCchHHHHHHHHHHhCCceEEec---C---CccEEEeCCHHHHHHHHHh-CCCccC
Q 045796 50 LPPGPRGLPLVGYLPFLGTDLYKSLTKLADAYGPIYKFWL---A---NKLFVVVSSSSIAKEMVRD-KDTIFS 115 (378)
Q Consensus 50 ~~PgP~~~p~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~---g---~~~~v~v~dpe~i~~vl~~-~~~~f~ 115 (378)
.+|.|...-++||+..- -....+.++..+||+|..+.+ + +.-+|-..+++.++..+.. ++..+.
T Consensus 3 ~~~~~~~~l~V~nlp~~--~t~~~l~~~F~~~G~v~~v~i~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~ 73 (115)
T 3lqv_A 3 LPPEVNRILYIRNLPYK--ITAEEMYDIFGKYGPIRQIRVGNTPETRGTAYVVYEDIFDAKNAVDHLSGFNVS 73 (115)
T ss_dssp CCTTCCSEEEEESCCTT--CCHHHHHHHHHTTSCEEEEEEECSTTTTTCEEEEESSHHHHHHHHHHHTTCBSS
T ss_pred CCCCCCCEEEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEeeCCCCCcEEEEEECCHHHHHHHHHHcCCCEEC
Confidence 45555555567887643 125567888899999988876 1 2347888899999998873 443343
No 81
>1s79_A Lupus LA protein; RRM, alpha/beta, RNA binding protein, translation; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=71.74 E-value=12 Score=26.83 Aligned_cols=57 Identities=16% Similarity=0.271 Sum_probs=39.2
Q ss_pred ccccccCCCCchHHHHHHHHHHhCCceEEecC--------CccEEEeCCHHHHHHHHHhCCCccCCC
Q 045796 59 LVGYLPFLGTDLYKSLTKLADAYGPIYKFWLA--------NKLFVVVSSSSIAKEMVRDKDTIFSNR 117 (378)
Q Consensus 59 ~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g--------~~~~v~v~dpe~i~~vl~~~~~~f~~r 117 (378)
++||+..- -....+.++..+||+|..+.+. |.-+|...+++.++.++..++..+.++
T Consensus 15 fV~~Lp~~--~te~~L~~~F~~~G~v~~v~i~~d~~g~~rG~aFV~F~~~e~a~~Ai~~~~~~~~gr 79 (103)
T 1s79_A 15 YIKGFPTD--ATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFVETPGQKYKET 79 (103)
T ss_dssp EEECCCTT--CCHHHHHHHHHTSSCEEEEEEECCCTTSCCCEEEEEESSHHHHHHHHTSSCCCCTTT
T ss_pred EEECCCCC--CCHHHHHHHHhhcCCEEEEEEEECCCCCCccEEEEEECCHHHHHHHHHcCCCEECCE
Confidence 45776542 1255678888999998877653 234688899999999997544444433
No 82
>1iqt_A AUF1, heterogeneous nuclear ribonucleoprotein D0; RNA-binding protein, hnRNP, telomere, DNA-binding protein, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 1wtb_A 1x0f_A
Probab=71.70 E-value=11 Score=24.75 Aligned_cols=46 Identities=11% Similarity=0.159 Sum_probs=33.7
Q ss_pred HHHHHHHHHHhCCceEEecC---------CccEEEeCCHHHHHHHHHhCCCccCC
Q 045796 71 YKSLTKLADAYGPIYKFWLA---------NKLFVVVSSSSIAKEMVRDKDTIFSN 116 (378)
Q Consensus 71 ~~~~~~~~~~yG~i~~~~~g---------~~~~v~v~dpe~i~~vl~~~~~~f~~ 116 (378)
...+.++..+||+|..+.+. +.-+|-..+++.++.++..++..+.+
T Consensus 13 ~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~Ai~~~~~~~~g 67 (75)
T 1iqt_A 13 EEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGL 67 (75)
T ss_dssp HHHHHHHHHHHSCCSEECCCCSCCCSSSCCCEEEECSSSHHHHHHHTTSSCCBTT
T ss_pred HHHHHHHHHhcCCeEEEEEEecCCCCCcCCEEEEEECCHHHHHHHHHhCCCeECC
Confidence 56678888999998887752 23467888999999999765444443
No 83
>2mss_A Protein (musashi1); RNA-binding domain, RNA binding protein; NMR {Mus musculus} SCOP: d.58.7.1 PDB: 2mst_A
Probab=69.18 E-value=15 Score=24.11 Aligned_cols=47 Identities=15% Similarity=0.174 Sum_probs=33.7
Q ss_pred HHHHHHHHHHhCCceEEecCC---------ccEEEeCCHHHHHHHHHhCCCccCCC
Q 045796 71 YKSLTKLADAYGPIYKFWLAN---------KLFVVVSSSSIAKEMVRDKDTIFSNR 117 (378)
Q Consensus 71 ~~~~~~~~~~yG~i~~~~~g~---------~~~v~v~dpe~i~~vl~~~~~~f~~r 117 (378)
...+.++..+||+|..+.+.. .-+|-..+++.++.++..++..+.++
T Consensus 13 ~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~a~~~~~~~~~g~ 68 (75)
T 2mss_A 13 VEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNK 68 (75)
T ss_dssp HHHHHHHHHTTSCCSEECCCBCSSSTTSCBEEEEECSCHHHHHHHHSSSCCCSSSC
T ss_pred HHHHHHHHHhcCCEEEEEEEecCCCCCcCcEEEEEECCHHHHHHHHHCCCCEECCE
Confidence 556788889999988877532 23577889999999987554444443
No 84
>2nlw_A Eukaryotic translation initiation factor 3 subunit 9; eukaryotic initiation factor 3 complex, RNA recognition motif; NMR {Homo sapiens}
Probab=61.81 E-value=22 Score=25.26 Aligned_cols=61 Identities=20% Similarity=0.364 Sum_probs=42.3
Q ss_pred CcccccccCCCCc----hHHHHHHHHHHhCCceEEecC-------CccEEEeCCHHHHHHHHHh-CCCccCCC
Q 045796 57 LPLVGYLPFLGTD----LYKSLTKLADAYGPIYKFWLA-------NKLFVVVSSSSIAKEMVRD-KDTIFSNR 117 (378)
Q Consensus 57 ~p~lG~~~~l~~~----~~~~~~~~~~~yG~i~~~~~g-------~~~~v~v~dpe~i~~vl~~-~~~~f~~r 117 (378)
.-++||+..-... ....+.++..+||+|..+.+. |.-+|-..+++.++..+.. ++..+.++
T Consensus 17 ~l~V~nLp~~~~~~~~~t~~~l~~~F~~~G~v~~v~i~~~~g~~~G~afV~f~~~~~A~~Ai~~l~g~~~~g~ 89 (105)
T 2nlw_A 17 VIVVDNVPQVGPDRLEKLKNVIHKIFSKFGKITNDFYPEEDGKTKGYIFLEYASPAHAVDAVKNADGYKLDKQ 89 (105)
T ss_dssp EEEEESCCCCCTTTTTHHHHHHHHHHGGGSCEEEEECCCBTTBSCCEEEEEECSSSHHHHHHHHCSSEECSTT
T ss_pred EEEEeCCCcchhhhhHHHHHHHHHHHhcCCCEEEEEeeCCCCCeeeEEEEEECCHHHHHHHHHHhCCcccCCC
Confidence 3467888754211 457788888999999888764 3446888899999988875 44444443
No 85
>3s8s_A Histone-lysine N-methyltransferase SETD1A; chromatin modification, transcription regulation, structural genomics, structural genomics consortium; 1.30A {Homo sapiens}
Probab=59.07 E-value=46 Score=23.94 Aligned_cols=50 Identities=20% Similarity=0.119 Sum_probs=36.1
Q ss_pred cccccccCCCCchHHHHHHHHHHhCCceEEecC---------CccEEEeCCHHHHHHHHHh
Q 045796 58 PLVGYLPFLGTDLYKSLTKLADAYGPIYKFWLA---------NKLFVVVSSSSIAKEMVRD 109 (378)
Q Consensus 58 p~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g---------~~~~v~v~dpe~i~~vl~~ 109 (378)
=++||+..- -....+.++..+||+|..+.+. +.-+|...+++.++..+..
T Consensus 9 lfV~nL~~~--~te~~L~~~F~~~G~i~~v~i~~d~~tg~~rG~aFV~f~~~~~A~~Ai~~ 67 (110)
T 3s8s_A 9 VTFARLNDN--VRETFLKDMCRKYGEVEEVEILLHPRTRKHLGLARVLFTSTRGAKETVKN 67 (110)
T ss_dssp EEEESCCTT--CCHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEECCCCC--CCHHHHHHHHHhcCCeeEEEEEECCCCCceeeEEEEEECCHHHHHHHHHH
Confidence 356777642 1256688888999999887652 1237888999999999864
No 86
>3ns6_A Eukaryotic translation initiation factor 3 subuni; 1.25A {Saccharomyces cerevisiae} PDB: 3ns5_A
Probab=58.33 E-value=30 Score=24.34 Aligned_cols=58 Identities=24% Similarity=0.292 Sum_probs=39.8
Q ss_pred cccccccCCCC----chHHHHHHHHHHhCCceEEecC---------CccEEEeCCHHHHHHHHHh-CCCccC
Q 045796 58 PLVGYLPFLGT----DLYKSLTKLADAYGPIYKFWLA---------NKLFVVVSSSSIAKEMVRD-KDTIFS 115 (378)
Q Consensus 58 p~lG~~~~l~~----~~~~~~~~~~~~yG~i~~~~~g---------~~~~v~v~dpe~i~~vl~~-~~~~f~ 115 (378)
=++||++..+. .....+.++..+||+|..+++. |.-+|...+++.++..+.. ++..+.
T Consensus 9 vfV~nLp~v~~~~~~~~~~~L~~~F~~~G~i~~v~i~~d~~tg~~kG~afV~f~~~~~A~~Ai~~lng~~~~ 80 (100)
T 3ns6_A 9 IVVNGAPVIPSAKVPVLKKALTSLFSKAGKVVNMEFPIDEATGKTKGFLFVECGSMNDAKKIIKSFHGKRLD 80 (100)
T ss_dssp EEEESCCCCBGGGHHHHHHHHHHHHHTTSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHHHHTTCBSS
T ss_pred EEEeCCCcCChHHHHHHHHHHHHHHHhcCCEeEEEEEEcCCCCccceEEEEEECCHHHHHHHHHHhCCcccC
Confidence 35677776431 2245688888999999888753 2346888899999999853 333343
No 87
>4f25_A Polyadenylate-binding protein 1; RRM fold, translation initiation, RNA-binding, EIF4G-binding translation; 1.90A {Homo sapiens} PDB: 4f26_A 2k8g_A
Probab=58.13 E-value=19 Score=26.21 Aligned_cols=57 Identities=18% Similarity=0.183 Sum_probs=38.9
Q ss_pred ccccccCCCCchHHHHHHHHHHhCCceEEecCC-------ccEEEeCCHHHHHHHHHh-CCCccCCC
Q 045796 59 LVGYLPFLGTDLYKSLTKLADAYGPIYKFWLAN-------KLFVVVSSSSIAKEMVRD-KDTIFSNR 117 (378)
Q Consensus 59 ~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g~-------~~~v~v~dpe~i~~vl~~-~~~~f~~r 117 (378)
++||+..-. -...+.++..+||+|..+++.. .=+|-..+++.++..+.. ++..+.++
T Consensus 9 fV~nLp~~~--te~~L~~~F~~~G~v~~v~i~~d~~~~kg~afV~f~~~~~A~~Ai~~l~~~~~~g~ 73 (115)
T 4f25_A 9 FIKNLDKSI--DNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDR 73 (115)
T ss_dssp EEESCCTTC--CHHHHHHHHGGGSCEEEEEEEEETTEEEEEEEEEESCHHHHHHHHHHHTTCEETTE
T ss_pred EECCCCCCC--CHHHHHHHHhccCCEEEEEEeecCCCCCceEEEEECCHHHHHHHHHHcCCCEECCE
Confidence 567776421 2567888889999987776421 237889999999999864 44444443
No 88
>1whx_A Hypothetical protein riken cDNA 1200009A02; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1
Probab=54.09 E-value=53 Score=23.56 Aligned_cols=58 Identities=17% Similarity=0.179 Sum_probs=40.2
Q ss_pred ccccccCCCCchHHHHHHHHHHhCCceEEecC---CccEEEeCCHHHHHHHHHh-CCCccCCCC
Q 045796 59 LVGYLPFLGTDLYKSLTKLADAYGPIYKFWLA---NKLFVVVSSSSIAKEMVRD-KDTIFSNRQ 118 (378)
Q Consensus 59 ~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g---~~~~v~v~dpe~i~~vl~~-~~~~f~~r~ 118 (378)
++||+..- .....+.++..+||+|..+.+. +.-+|-..+++.++..+.. ++..+.+++
T Consensus 14 ~V~nLp~~--~te~~L~~~F~~~G~i~~v~i~~~~g~afV~f~~~~~A~~Ai~~l~g~~~~g~~ 75 (111)
T 1whx_A 14 LAKNLPAG--TLAAEIQETFSRFGSLGRVLLPEGGITAIVEFLEPLEARKAFRHLAYSKFHHVP 75 (111)
T ss_dssp EEESCCTT--CCHHHHHHHHHTTSCEEEEECCSSSSCEEEEESCHHHHHHHHHHHTTCBSSSSB
T ss_pred EEeCCCCC--CCHHHHHHHHHhcCCEEEEEEeCCCCEEEEEeCCHHHHHHHHHHhCCCEECCeE
Confidence 45666532 2256688889999999888763 3457888899999998864 444555554
No 89
>4fxv_A ELAV-like protein 1; RNA recognition motif, putative RNA-binding domain, transcri structural genomics, joint center for structural genomics; 1.90A {Homo sapiens}
Probab=52.52 E-value=27 Score=24.59 Aligned_cols=56 Identities=20% Similarity=0.189 Sum_probs=37.5
Q ss_pred ccccccCCCCchHHHHHHHHHHhCCceEEecCC---------ccEEEeCCHHHHHHHHHh-CCCccCC
Q 045796 59 LVGYLPFLGTDLYKSLTKLADAYGPIYKFWLAN---------KLFVVVSSSSIAKEMVRD-KDTIFSN 116 (378)
Q Consensus 59 ~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g~---------~~~v~v~dpe~i~~vl~~-~~~~f~~ 116 (378)
++||+..- -....+.++..+||+|..+++.. .=+|-..+++.++.++.. ++..+.+
T Consensus 23 fV~nLp~~--~te~~L~~~F~~~G~I~~v~i~~d~~tg~~kG~afV~f~~~~~A~~Ai~~lng~~~~g 88 (99)
T 4fxv_A 23 IVNYLPQN--MTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTLNGLRLQS 88 (99)
T ss_dssp EEESCCTT--CCHHHHHHHHHTTSCEEEEEEEECSSSCCEEEEEEEEESSHHHHHHHHHHHTTCEETT
T ss_pred EEeCCCCC--CCHHHHHHHHHhcCCEEEeEeeecCCCCcccccEEEEECCHHHHHHHHHHhCCCEECC
Confidence 55776542 12566888889999988776521 125888899999998864 4434443
No 90
>2dnz_A Probable RNA-binding protein 23; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=51.75 E-value=54 Score=22.37 Aligned_cols=60 Identities=22% Similarity=0.251 Sum_probs=40.3
Q ss_pred cccccccCCCCchHHHHHHHHHHhCCceEEecCC---------ccEEEeCCHHHHHHHHHh-CCCccCCCCC
Q 045796 58 PLVGYLPFLGTDLYKSLTKLADAYGPIYKFWLAN---------KLFVVVSSSSIAKEMVRD-KDTIFSNRQT 119 (378)
Q Consensus 58 p~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g~---------~~~v~v~dpe~i~~vl~~-~~~~f~~r~~ 119 (378)
=++||+..- -....+.++..+||+|..+.+.. .-+|-..+++.++.++.. ++..+.+++.
T Consensus 8 l~v~nlp~~--~t~~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~~l 77 (95)
T 2dnz_A 8 LYVGSLHFN--ITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPM 77 (95)
T ss_dssp EEEESCCTT--CCHHHHHHHHTTTSCEEEEEEECCSSSCCCCSEEEEEESCHHHHHHHHHHHTTCCSSSSCC
T ss_pred EEEeCCCCC--CCHHHHHHHHHhcCCEeEEEEeecCCCCceeeEEEEEECCHHHHHHHHHHhCCCeeCCcEE
Confidence 356777642 12556788889999988777532 336888899999999873 4445555443
No 91
>2kxn_B Transformer-2 protein homolog beta; SR protein, RRM, splicing factor, RNA protein complex, SMN, binding protein-RNA complex; NMR {Homo sapiens} PDB: 2rra_A 2rrb_A
Probab=50.58 E-value=74 Score=23.56 Aligned_cols=59 Identities=22% Similarity=0.190 Sum_probs=39.5
Q ss_pred CcccccccCCCCchHHHHHHHHHHhCCceEEecC---------CccEEEeCCHHHHHHHHHh-CCCccCCC
Q 045796 57 LPLVGYLPFLGTDLYKSLTKLADAYGPIYKFWLA---------NKLFVVVSSSSIAKEMVRD-KDTIFSNR 117 (378)
Q Consensus 57 ~p~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g---------~~~~v~v~dpe~i~~vl~~-~~~~f~~r 117 (378)
.-++||+..-. ....+.++..+||+|..+.+. +.-+|-..+++.++.++.. ++..+.++
T Consensus 48 ~l~V~nLp~~~--te~~L~~~F~~~G~I~~v~i~~d~~tg~~~G~afV~F~~~~~A~~Ai~~lng~~i~g~ 116 (129)
T 2kxn_B 48 CLGVFGLSLYT--TERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGR 116 (129)
T ss_dssp CBCEETCTTSC--CHHHHHHHHTTTSCEEEEEEECCSSSSCCCCEEEEEESCHHHHHHHHHHHTTCCSSSS
T ss_pred EEEEeCCCCCC--CHHHHHHHHHhcCCeEEEEEEecCCCCccceEEEEEECCHHHHHHHHHHhCCCEECCE
Confidence 44567766431 245678888999999887753 1236788899999999874 44344433
No 92
>2adc_A Polypyrimidine tract-binding protein 1; RBD, RRM, protein-RNA complex, RNA binding protein/RNA complex; NMR {Homo sapiens} SCOP: d.58.7.1 d.58.7.1 PDB: 2evz_A
Probab=49.85 E-value=53 Score=27.06 Aligned_cols=58 Identities=17% Similarity=0.146 Sum_probs=40.9
Q ss_pred ccccccC-CCCchHHHHHHHHHHhCCceEEecC----CccEEEeCCHHHHHHHHH-hCCCccCCCC
Q 045796 59 LVGYLPF-LGTDLYKSLTKLADAYGPIYKFWLA----NKLFVVVSSSSIAKEMVR-DKDTIFSNRQ 118 (378)
Q Consensus 59 ~lG~~~~-l~~~~~~~~~~~~~~yG~i~~~~~g----~~~~v~v~dpe~i~~vl~-~~~~~f~~r~ 118 (378)
++||+.. -. -...+.++..+||+|..+.+. +.-+|-..+++.++..+. -++..+.+++
T Consensus 38 ~V~nLp~~~~--te~~L~~~F~~~G~i~~v~i~~~~~g~afV~F~~~~~A~~Ai~~l~g~~~~g~~ 101 (229)
T 2adc_A 38 LVSNLNPERV--TPQSLFILFGVYGDVQRVKILFNKKENALVQMADGNQAQLAMSHLNGHKLHGKP 101 (229)
T ss_dssp EEESCCTTTC--CHHHHHHHHHHHTCEEEEEECCTTSCCEEEEESCHHHHHHHHHHHTTCBCSSSB
T ss_pred EEeCCCcccC--CHHHHHHHHHhCCCeEEEEEEECCCCEEEEEECCHHHHHHHHHHhCCCeECCeE
Confidence 5687764 21 146677888999999888764 345788899999999986 4444555443
No 93
>1whw_A Hypothetical protein riken cDNA 1200009A02; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1
Probab=49.68 E-value=49 Score=22.84 Aligned_cols=57 Identities=25% Similarity=0.380 Sum_probs=38.6
Q ss_pred ccccccCCCCchHHHHHHHHHHhCCceEEecC---------CccEEEeCCHHHHHHHHHh-CCCccCCC
Q 045796 59 LVGYLPFLGTDLYKSLTKLADAYGPIYKFWLA---------NKLFVVVSSSSIAKEMVRD-KDTIFSNR 117 (378)
Q Consensus 59 ~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g---------~~~~v~v~dpe~i~~vl~~-~~~~f~~r 117 (378)
++||+..- -....+.++..+||+|..+.+. +.-+|-..+++.++.++.. ++..+.++
T Consensus 12 ~V~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~ 78 (99)
T 1whw_A 12 FVRNLSYT--SSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAEVDGQVFQGR 78 (99)
T ss_dssp EEECCCTT--CCHHHHHHHHHTTSCEEEEECCCCTTTCCCCSEEEEEESSHHHHHHHHHHTTTEESSSC
T ss_pred EEeCCCCC--CCHHHHHHHHHhcCCEeEEEEEecCCCCCcCeEEEEEECCHHHHHHHHHHhCCCEECCc
Confidence 55776542 1255688888999999888763 2346888899999999854 33334433
No 94
>3ex7_B RNA-binding protein 8A; protein-RNA complex, mRNA processing, mRNA splicing, mRNA transport, nonsense-mediated mRNA decay, nucleus; HET: ADP; 2.30A {Homo sapiens} PDB: 2j0q_D*
Probab=49.56 E-value=62 Score=23.59 Aligned_cols=59 Identities=12% Similarity=0.056 Sum_probs=40.7
Q ss_pred cccccccCCCCchHHHHHHHHHHhCCceEEecC---------CccEEEeCCHHHHHHHHHh-CCCccCCCC
Q 045796 58 PLVGYLPFLGTDLYKSLTKLADAYGPIYKFWLA---------NKLFVVVSSSSIAKEMVRD-KDTIFSNRQ 118 (378)
Q Consensus 58 p~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g---------~~~~v~v~dpe~i~~vl~~-~~~~f~~r~ 118 (378)
-++||+..- -....+.++..+||+|..+.+. +.-+|...+++.++.++.. ++..+.++.
T Consensus 25 l~V~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~~ 93 (126)
T 3ex7_B 25 LFVTGVHEE--ATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEGLNGQDLMGQP 93 (126)
T ss_dssp EEEESCCTT--CCHHHHHHHHHTTSCEEEEECCBCTTTSSBCSCEEEEESSHHHHHHHHHHHTTCBSSSSB
T ss_pred EEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEecCCCCccceEEEEEECCHHHHHHHHHHhCCCeeCCeE
Confidence 356776542 1256678888999999888762 2347888999999999863 555555544
No 95
>2kvi_A Nuclear polyadenylated RNA-binding protein 3; RNA-binding motif, RRM, transcription termination, NUC phosphoprotein; NMR {Saccharomyces cerevisiae}
Probab=49.21 E-value=56 Score=22.49 Aligned_cols=58 Identities=14% Similarity=0.275 Sum_probs=40.4
Q ss_pred ccccccC-CCCchHHHHHHHHHHhCCceEEec-CCccEEEeCCHHHHHHHHHh-CCCccCCCC
Q 045796 59 LVGYLPF-LGTDLYKSLTKLADAYGPIYKFWL-ANKLFVVVSSSSIAKEMVRD-KDTIFSNRQ 118 (378)
Q Consensus 59 ~lG~~~~-l~~~~~~~~~~~~~~yG~i~~~~~-g~~~~v~v~dpe~i~~vl~~-~~~~f~~r~ 118 (378)
++||+.. -. ....+.++..+||+|..+.+ -+.-+|-..+++.++.++.. ++..+.+++
T Consensus 14 ~V~nlp~~~~--t~~~l~~~F~~~G~v~~v~i~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~ 74 (96)
T 2kvi_A 14 FIGNLPLKNV--SKEDLFRIFSPYGHIMQINIKNAFGFIQFDNPQSVRDAIECESQEMNFGKK 74 (96)
T ss_dssp EEESSTTSCC--CHHHHHHHHTTTCCCCEEEEETTEEEEEESCHHHHHHHHHHHTCSSCBTTT
T ss_pred EEeCCCcccC--CHHHHHHHHHhcCCEEEEEEeCCEEEEEECCHHHHHHHHHHcCCCeeCCcE
Confidence 5687774 21 15567888899999887775 34457888999999999874 444454443
No 96
>1p27_B RNA-binding protein 8A; nuclear protein, mRNA splicing; 2.00A {Homo sapiens} SCOP: d.58.7.1
Probab=49.16 E-value=49 Score=23.23 Aligned_cols=57 Identities=12% Similarity=0.073 Sum_probs=38.5
Q ss_pred ccccccCCCCchHHHHHHHHHHhCCceEEecC---------CccEEEeCCHHHHHHHHHh-CCCccCCC
Q 045796 59 LVGYLPFLGTDLYKSLTKLADAYGPIYKFWLA---------NKLFVVVSSSSIAKEMVRD-KDTIFSNR 117 (378)
Q Consensus 59 ~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g---------~~~~v~v~dpe~i~~vl~~-~~~~f~~r 117 (378)
++||+..- -....+.++..+||+|..+.+. +.-+|-..+++.++.++.. ++..+.++
T Consensus 27 ~V~nlp~~--~t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~ 93 (106)
T 1p27_B 27 FVTGVHEE--ATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEGLNGQDLMGQ 93 (106)
T ss_dssp EEECCCTT--CCHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESCHHHHHHHHHHHTTCBSSSS
T ss_pred EEeCCCCC--CCHHHHHHHHhccCCeEEEEEEecCCCCceeeEEEEEECCHHHHHHHHHHhcCCEECCc
Confidence 56776642 1245678888999998887752 2236788899999999864 44444443
No 97
>2dgx_A KIAA0430 protein; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=49.10 E-value=25 Score=24.45 Aligned_cols=60 Identities=15% Similarity=0.101 Sum_probs=38.9
Q ss_pred cccccccCC-C-CchHHHHHHHHHHhCCceEEecC------CccEEEeCCHHHHHHHHHh-CCCccCCC
Q 045796 58 PLVGYLPFL-G-TDLYKSLTKLADAYGPIYKFWLA------NKLFVVVSSSSIAKEMVRD-KDTIFSNR 117 (378)
Q Consensus 58 p~lG~~~~l-~-~~~~~~~~~~~~~yG~i~~~~~g------~~~~v~v~dpe~i~~vl~~-~~~~f~~r 117 (378)
-++||+..- . ..+...+.++..+||+|..+++. +.-+|-..+++.++..+.. ++..+.++
T Consensus 12 l~V~nL~~~~~~~~l~~~l~~~F~~~G~v~~v~i~~~~~~rg~afV~f~~~~~A~~Ai~~l~g~~~~gr 80 (96)
T 2dgx_A 12 VQVSNIDYRLSRKELQQLLQEAFARHGKVKSVELSPHTDYQLKAVVQMENLQDAIGAVNSLHRYKIGSK 80 (96)
T ss_dssp EEEESCCTTSCHHHHHHHHHHHHHHHSCEEEEEECSCCSTTCCEEEEESSHHHHHHHHHHHTTEEETTE
T ss_pred EEEECCCCCCCHHHHHHHHHHhccccCcEEEEEEEeCCCCCeEEEEEECCHHHHHHHHHHhCCCEECCe
Confidence 356877643 2 12233345888999999888764 2346888899999999863 33334433
No 98
>2hvz_A Splicing factor, arginine/serine-rich 7; RRM, RNA binding protein; NMR {Homo sapiens}
Probab=48.75 E-value=45 Score=23.20 Aligned_cols=57 Identities=25% Similarity=0.368 Sum_probs=37.8
Q ss_pred cccccCCCCchHHHHHHHHHHhCCceEEecC----CccEEEeCCHHHHHHHHHh-CCCccCCCC
Q 045796 60 VGYLPFLGTDLYKSLTKLADAYGPIYKFWLA----NKLFVVVSSSSIAKEMVRD-KDTIFSNRQ 118 (378)
Q Consensus 60 lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g----~~~~v~v~dpe~i~~vl~~-~~~~f~~r~ 118 (378)
+||+..- -....+.++..+||+|..+.+. +.-+|-..+++.++.++.. ++..+.++.
T Consensus 5 V~nLp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~~ 66 (101)
T 2hvz_A 5 VGNLGTG--AGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSR 66 (101)
T ss_dssp EECCCSS--CSHHHHHHHHHHHCCCSEEEEESSSSSEEEEECSSHHHHHHHHHHHHHSCSSSCC
T ss_pred EeCCCCC--CCHHHHHHHHHhcCCeEEEEEeeCCCCEEEEEECCHHHHHHHHHHHCCCeECCcE
Confidence 4555432 1256688888999998777753 3346888899999999863 333444443
No 99
>3beg_B Splicing factor, arginine/serine-rich 1; kinase, SR protein kinase, SR protein, PRE-mRNA splicing, at binding, chromosome partition; HET: SEP ANP; 2.90A {Homo sapiens} SCOP: d.58.7.1 PDB: 2o3d_A 1wg4_A
Probab=47.57 E-value=46 Score=24.07 Aligned_cols=58 Identities=19% Similarity=0.156 Sum_probs=39.9
Q ss_pred ccccccCCCCchHHHHHHHHHHhCCceEEecC--CccEEEeCCHHHHHHHHHh-CCCccCCCC
Q 045796 59 LVGYLPFLGTDLYKSLTKLADAYGPIYKFWLA--NKLFVVVSSSSIAKEMVRD-KDTIFSNRQ 118 (378)
Q Consensus 59 ~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g--~~~~v~v~dpe~i~~vl~~-~~~~f~~r~ 118 (378)
++||+..-. ....+.++..+||+|..+.+. +.-+|...+++.++..+.. ++..+.++.
T Consensus 20 ~V~nLp~~~--t~~~l~~~F~~~G~v~~~~i~~~g~afV~f~~~~~a~~Ai~~l~g~~~~gr~ 80 (115)
T 3beg_B 20 VVSGLPPSG--SWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHE 80 (115)
T ss_dssp EEEECCSSC--CTTHHHHHHGGGSCEEEEEECTTSEEEEEESSHHHHHHHHHHHTTCBCCCTT
T ss_pred EEeCCCCCC--CHHHHHHHHHhcCCeEEEEEecCCEEEEEECCHHHHHHHHHHhCCCEECCcE
Confidence 567776431 144567788899999887763 4557888999999999873 444455543
No 100
>1x5u_A Splicing factor 3B subunit 4 (spliceosome associated protein 49) (SAP 49) (SF3B50)...; structure genomics,RRM domain,splicing factor 3B; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=47.01 E-value=70 Score=22.29 Aligned_cols=59 Identities=19% Similarity=0.026 Sum_probs=40.7
Q ss_pred cccccccCCCCchHHHHHHHHHHhCCceEEecCC---------ccEEEeCCHHHHHHHHHh-CCCccCCCC
Q 045796 58 PLVGYLPFLGTDLYKSLTKLADAYGPIYKFWLAN---------KLFVVVSSSSIAKEMVRD-KDTIFSNRQ 118 (378)
Q Consensus 58 p~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g~---------~~~v~v~dpe~i~~vl~~-~~~~f~~r~ 118 (378)
=++||+..- -....+.++..+||+|..+.+.. .-+|-..+++.++.++.. ++..+.+++
T Consensus 18 l~V~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~~ 86 (105)
T 1x5u_A 18 VYVGGLDEK--VSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMDMIKLYGKP 86 (105)
T ss_dssp EEEECCCTT--CCHHHHHHHHHTTSCEEEEECCBCSSSCSBCSCEEEEESSHHHHHHHHHHSSSCBCSSCB
T ss_pred EEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEecCCCCcCCcEEEEEECCHHHHHHHHHHhCCCeECCeE
Confidence 356777643 12566888889999998887633 246888999999999975 444444443
No 101
>2dnm_A SRP46 splicing factor; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=46.59 E-value=56 Score=22.79 Aligned_cols=59 Identities=17% Similarity=0.241 Sum_probs=40.5
Q ss_pred cccccccCCCCchHHHHHHHHHHhCCceEEecC---------CccEEEeCCHHHHHHHHHh-CCCccCCCC
Q 045796 58 PLVGYLPFLGTDLYKSLTKLADAYGPIYKFWLA---------NKLFVVVSSSSIAKEMVRD-KDTIFSNRQ 118 (378)
Q Consensus 58 p~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g---------~~~~v~v~dpe~i~~vl~~-~~~~f~~r~ 118 (378)
=++||+..- -....+.++..+||+|..+.+. +.-+|-..+++.++.++.. ++..+.+++
T Consensus 16 l~V~nLp~~--~t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~ 84 (103)
T 2dnm_A 16 LKVDNLTYR--TSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQDAEAAMDGAELDGRE 84 (103)
T ss_dssp EEEESCCTT--CCHHHHHHHHTTTSCEEEEECCBCSSSCSBCSCEEEEESSSSHHHHHHHHHSSCCBTTBC
T ss_pred EEEeCCCCC--CCHHHHHHHHHhcCCEEEEEEEeCCCCCCCCeEEEEEECCHHHHHHHHHHcCCCEECCcE
Confidence 356777643 1255678888999999888763 2346888899999999873 444455443
No 102
>3mdf_A Peptidyl-prolyl CIS-trans isomerase E; RRM domain, PHD finger, CYP33, MLL, RNA binding protein, ISO mRNA processing, mRNA splicing, nucleus; 1.85A {Homo sapiens} SCOP: d.58.7.1 PDB: 2kyx_A 3lpy_A*
Probab=45.89 E-value=61 Score=21.46 Aligned_cols=51 Identities=20% Similarity=0.089 Sum_probs=35.8
Q ss_pred CcccccccCCCCchHHHHHHHHHHhCCceEEecC---------CccEEEeCCHHHHHHHHHh
Q 045796 57 LPLVGYLPFLGTDLYKSLTKLADAYGPIYKFWLA---------NKLFVVVSSSSIAKEMVRD 109 (378)
Q Consensus 57 ~p~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g---------~~~~v~v~dpe~i~~vl~~ 109 (378)
.-++||+..- -....+.++..+||+|..+.+. +.-+|-..+++.++.++..
T Consensus 9 ~l~V~nl~~~--~~~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 68 (85)
T 3mdf_A 9 VLYVGGLAEE--VDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDN 68 (85)
T ss_dssp EEEEECCCTT--CCHHHHHHHHGGGSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHHH
T ss_pred EEEEECCCCC--CCHHHHHHHHhccCCEEEEEEEECCCCCccccEEEEEECCHHHHHHHHHH
Confidence 3456776642 1256677888999999888752 1236888899999999854
No 103
>1nu4_A U1A RNA binding domain; RNA recognition motif, U1 small nuclear ribonucleoprotein, R binding domain, RNA binding protein; HET: MLA; 1.80A {Homo sapiens} SCOP: d.58.7.1 PDB: 1drz_A* 1urn_A 3hhn_B* 3egz_A* 1zzn_A* 1u6b_A* 3cun_A* 3cul_A* 3g8s_A* 3g8t_A* 3g96_A* 3g9c_A* 3irw_P* 3mum_P* 3mur_P* 3mut_P* 3muv_P* 3mxh_P* 3p49_B 3r1h_A* ...
Probab=45.78 E-value=30 Score=23.90 Aligned_cols=58 Identities=22% Similarity=0.312 Sum_probs=38.8
Q ss_pred cccccccCC-C-CchHHHHHHHHHHhCCceEEecC------CccEEEeCCHHHHHHHHHh-CCCccC
Q 045796 58 PLVGYLPFL-G-TDLYKSLTKLADAYGPIYKFWLA------NKLFVVVSSSSIAKEMVRD-KDTIFS 115 (378)
Q Consensus 58 p~lG~~~~l-~-~~~~~~~~~~~~~yG~i~~~~~g------~~~~v~v~dpe~i~~vl~~-~~~~f~ 115 (378)
=++||+..- . ......+.++..+||+|..+.+. +.-+|-..+++.++..+.. ++..+.
T Consensus 11 l~V~nLp~~~~~~~l~~~l~~~f~~~G~i~~v~i~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~ 77 (97)
T 1nu4_A 11 IYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRSMQGFPFY 77 (97)
T ss_dssp EEEESCCTTSCHHHHHHHHHHHHGGGSCEEEEECCHHHHHTTCEEEEESSHHHHHHHHHHHTTCEET
T ss_pred EEEeCCCCCCCHHHHHHHHHHHHHhCCCEEEEEEEcCCCcCcEEEEEeCCHHHHHHHHHHhCCCEEC
Confidence 356877643 2 12233455888999999888654 4457888999999999864 443343
No 104
>2pe8_A Splicing factor 45; RRM, protein binding; 2.00A {Homo sapiens} PDB: 2peh_A
Probab=45.74 E-value=23 Score=25.51 Aligned_cols=66 Identities=20% Similarity=0.232 Sum_probs=41.2
Q ss_pred CCCCCcccccccCC---CCchHHHHHHHHHHhCCceEEecC----------CccEEEeCCHHHHHHHHHh-CCCccCCCC
Q 045796 53 GPRGLPLVGYLPFL---GTDLYKSLTKLADAYGPIYKFWLA----------NKLFVVVSSSSIAKEMVRD-KDTIFSNRQ 118 (378)
Q Consensus 53 gP~~~p~lG~~~~l---~~~~~~~~~~~~~~yG~i~~~~~g----------~~~~v~v~dpe~i~~vl~~-~~~~f~~r~ 118 (378)
.|...=+++|+..- .......+.+...+||+|..+++. |.-+|-..+++.++..... ++..|.+|+
T Consensus 6 ~~s~~l~l~Nm~~~~~l~dd~~~dl~~~f~~~G~V~~v~i~~~~~~~~~~~G~~FV~f~~~~~A~~Ai~~lnG~~~~Gr~ 85 (105)
T 2pe8_A 6 CPTKVVLLRNMVGAGEVDEDLEVETKEECEKYGKVGKCVIFEIPGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRV 85 (105)
T ss_dssp SCCSEEEEESSSCSCCC---CHHHHHHHGGGGSCEEEEEEEECSSCCTTTSEEEEEEESSHHHHHHHHHHHTTCEETTEE
T ss_pred CCCCEEEEEcCCChHHhhHHHHHHHHHHHHhcCCEEEEEEecCCCCCCCCcEEEEEEECCHHHHHHHHHHHCCCEECCcE
Confidence 34445566777632 223456777888899998877652 1225777899988888754 444555543
No 105
>3d2w_A TAR DNA-binding protein 43; DP-43 proteinopathy, TDP-43 inclusions, RNA recognition MOTI U, ALS, RRM; HET: DNA; 1.65A {Mus musculus}
Probab=45.59 E-value=40 Score=23.10 Aligned_cols=48 Identities=17% Similarity=0.240 Sum_probs=34.8
Q ss_pred CcccccccCCCCchHHHHHHHHHHhCCceEEecC----CccEEEeCCHHHHHHH
Q 045796 57 LPLVGYLPFLGTDLYKSLTKLADAYGPIYKFWLA----NKLFVVVSSSSIAKEM 106 (378)
Q Consensus 57 ~p~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g----~~~~v~v~dpe~i~~v 106 (378)
.=++||+..=. -...+.++..+||+|..+++. |.-+|-..+++.++++
T Consensus 13 ~l~V~~Lp~~~--te~~L~~~F~~~G~i~~v~i~~~srGfaFV~F~~~~~A~~~ 64 (89)
T 3d2w_A 13 KVFVGRCTEDM--TAEELQQFFCQYGEVVDVFIPKPFRAFAFVTFADDKVAQSL 64 (89)
T ss_dssp EEEEESCCTTC--CHHHHHHHHTTTSCEEEEECCSSCCSEEEEEESCHHHHHHH
T ss_pred EEEEeCCCCCC--CHHHHHHHHhccCCEEEEEEeeCCCCEEEEEECCHHHHHHH
Confidence 34567776421 256688888999999888864 3457888999999864
No 106
>2la6_A RNA-binding protein FUS; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, RNA recognition; NMR {Homo sapiens}
Probab=45.28 E-value=73 Score=21.97 Aligned_cols=57 Identities=19% Similarity=0.049 Sum_probs=37.1
Q ss_pred cccccccCCCCchHHHHHHHHHHhCCceE--------EecC---------CccEEEeCCHHHHHHHHHh-CCCccCC
Q 045796 58 PLVGYLPFLGTDLYKSLTKLADAYGPIYK--------FWLA---------NKLFVVVSSSSIAKEMVRD-KDTIFSN 116 (378)
Q Consensus 58 p~lG~~~~l~~~~~~~~~~~~~~yG~i~~--------~~~g---------~~~~v~v~dpe~i~~vl~~-~~~~f~~ 116 (378)
=++||+..- -....+.++..+||+|.. +.+. |.-+|...+++.++..+.. ++..+.+
T Consensus 16 l~V~nLp~~--~t~~~l~~~F~~~G~i~~~~~~~~~~v~i~~~~~~g~~~G~afV~f~~~~~a~~Ai~~l~g~~~~g 90 (99)
T 2la6_A 16 IFVQGLGEN--VTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEATVSFDDPPSAKAAIDWFDGKEFSG 90 (99)
T ss_dssp EEEECCCSS--CCHHHHHHHHTTTSCBCEETTTTEESEEEEECTTTCSEEEEEEEEBSSHHHHHHHHHHHTTCBSSS
T ss_pred EEEeCCCCC--CCHHHHHHHHHHhCCEeeccccccccEEEEecCCCCCeeeEEEEEECCHHHHHHHHHHhCCCEeCC
Confidence 356777642 125667888899999866 5432 1236788899999999863 4444443
No 107
>4a8x_A RNA-binding protein with serine-rich domain 1; transcription, splicing, RNA processing, nonsense mediated D NMD, HDAC, histone deacetylation; 1.90A {Homo sapiens}
Probab=44.72 E-value=59 Score=21.69 Aligned_cols=57 Identities=12% Similarity=0.173 Sum_probs=37.8
Q ss_pred ccccccCCCCchHHHHHHHHHHhCCceEEecC----------CccEEEeCCHHHHHHHHHh-CCCccCCC
Q 045796 59 LVGYLPFLGTDLYKSLTKLADAYGPIYKFWLA----------NKLFVVVSSSSIAKEMVRD-KDTIFSNR 117 (378)
Q Consensus 59 ~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g----------~~~~v~v~dpe~i~~vl~~-~~~~f~~r 117 (378)
++||+..- -....+.++..+||+|..+.+. +.-+|-..+++.++.++.. ++..+.++
T Consensus 8 ~V~nlp~~--~t~~~l~~~F~~~G~i~~~~i~~~~~~~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~ 75 (88)
T 4a8x_A 8 HIGRLTRN--VTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQ 75 (88)
T ss_dssp EEECCCTT--CCHHHHHHHHHTTSCEEEEECCEETTEEEEECSEEEEEESSHHHHHHHHHHHTTCEETTE
T ss_pred EEeCCCCC--CCHHHHHHHHHhCCCEEEEEEEeCCCCCCCCCcEEEEEEecHHHHHHHHHHcCCCeECCe
Confidence 45666532 1255677888999998777652 2336888899999999874 44444433
No 108
>2cqc_A Arginine/serine-rich splicing factor 10; RNA recognition motif, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=44.49 E-value=71 Score=21.67 Aligned_cols=55 Identities=24% Similarity=0.215 Sum_probs=37.7
Q ss_pred CCCCCcccccccCCCCchHHHHHHHHHHhCCceEEecC---------CccEEEeCCHHHHHHHHHh
Q 045796 53 GPRGLPLVGYLPFLGTDLYKSLTKLADAYGPIYKFWLA---------NKLFVVVSSSSIAKEMVRD 109 (378)
Q Consensus 53 gP~~~p~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g---------~~~~v~v~dpe~i~~vl~~ 109 (378)
.|...=++||+..- -....+.++..+||+|..+.+. +.-+|-..+++.++.++..
T Consensus 13 ~~~~~l~v~nlp~~--~t~~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 76 (95)
T 2cqc_A 13 DPNCCLGVFGLSLY--TTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKER 76 (95)
T ss_dssp CGGGCEEEESCCSS--CCHHHHHHHHHTTSCEEEEEEEECSSSSSEEEEEEEEESSHHHHHHHHHH
T ss_pred CCCCEEEEECCCCC--CCHHHHHHHHHhcCCeeEEEEEEcCCCCCcccEEEEEECCHHHHHHHHHH
Confidence 33334466777643 1255688888999998877752 1236778899999999874
No 109
>2a3j_A U1 small nuclear ribonucleoprotein A; computationally designed protein, RRM, U1A, RNA binding protein; NMR {Homo sapiens}
Probab=44.48 E-value=75 Score=23.59 Aligned_cols=61 Identities=20% Similarity=0.243 Sum_probs=40.5
Q ss_pred cccccccCC-C-CchHHHHHHHHHHhCCceEEecC------CccEEEeCCHHHHHHHHHh-CCCccCCCC
Q 045796 58 PLVGYLPFL-G-TDLYKSLTKLADAYGPIYKFWLA------NKLFVVVSSSSIAKEMVRD-KDTIFSNRQ 118 (378)
Q Consensus 58 p~lG~~~~l-~-~~~~~~~~~~~~~yG~i~~~~~g------~~~~v~v~dpe~i~~vl~~-~~~~f~~r~ 118 (378)
=++||+..- . ..+...+.++..+||+|..+.+. |.-+|...+++.++..+.. ++..+.+++
T Consensus 32 LfV~nL~~~~~e~~L~~~L~~~F~~~G~I~~v~i~~~~~~rG~aFV~F~~~~~A~~Ai~~lng~~l~gr~ 101 (127)
T 2a3j_A 32 VLITNINPEVPKEKLQALLYALASSQGDILDIVVDLSDDNSGKAYIVFATQESAQAFVEAFQGYPFQGNP 101 (127)
T ss_dssp EEEESCCTTSCHHHHHHHHHHHHHHHSCEEEEEECCCCSSCCCEEEEESSHHHHHHHHHHSTTCCCTTSC
T ss_pred EEEeCCCCCCCHHHHHHHHHHHhccCCCeEEEEeccCCCcCCEEEEEECCHHHHHHHHHHHCCCEeCCCE
Confidence 356887642 2 12334567888999999887652 3457888999999998854 444455544
No 110
>2dgs_A DAZ-associated protein 1; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=43.94 E-value=76 Score=21.82 Aligned_cols=59 Identities=12% Similarity=0.104 Sum_probs=40.8
Q ss_pred cccccccCCCCchHHHHHHHHHHhCCceEEecC---------CccEEEeCCHHHHHHHHHhCCCccCCCC
Q 045796 58 PLVGYLPFLGTDLYKSLTKLADAYGPIYKFWLA---------NKLFVVVSSSSIAKEMVRDKDTIFSNRQ 118 (378)
Q Consensus 58 p~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g---------~~~~v~v~dpe~i~~vl~~~~~~f~~r~ 118 (378)
=++||+..- -....+.++..+||+|..+.+. +.-+|-..+++.++.++..++..+.+++
T Consensus 13 l~V~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~~~~~~~g~~ 80 (99)
T 2dgs_A 13 IFVGGIPHN--CGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKK 80 (99)
T ss_dssp EEEESCCSS--CCHHHHHHHHSSSSCEEEEEECCCTTTCSCCSEEEEEESSHHHHHHHHHHCCCBSSSCB
T ss_pred EEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEeCCCCCCCCceEEEEECCHHHHHHHHHhCCCEECCeE
Confidence 356777643 1255678888899999887763 2346888999999999975555555544
No 111
>3ucg_A Polyadenylate-binding protein 2; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: PGE; 1.95A {Homo sapiens} PDB: 3b4d_A 3b4m_A
Probab=43.41 E-value=31 Score=23.32 Aligned_cols=47 Identities=11% Similarity=0.198 Sum_probs=32.8
Q ss_pred HHHHHHHHHHhCCceEEecCC---------ccEEEeCCHHHHHHHHHhCCCccCCC
Q 045796 71 YKSLTKLADAYGPIYKFWLAN---------KLFVVVSSSSIAKEMVRDKDTIFSNR 117 (378)
Q Consensus 71 ~~~~~~~~~~yG~i~~~~~g~---------~~~v~v~dpe~i~~vl~~~~~~f~~r 117 (378)
...+.++..+||+|..+.+.. .-+|-..+++.++.++.-++..+.++
T Consensus 20 ~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~a~~~~g~~~~g~ 75 (89)
T 3ucg_A 20 AEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDESLFRGR 75 (89)
T ss_dssp HHHHHHHHGGGCCEEEEEEEESCSSSSCCEEEEEEESSTHHHHHHGGGTTCEETTE
T ss_pred HHHHHHHHHhCCCEEEEEEEecCCCCCcceEEEEEECCHHHHHHHHhcCCCEECCc
Confidence 556778888999987776421 23688889999999884444444433
No 112
>2fy1_A RNA-binding motif protein, Y chromosome, family 1 member A1; RNA binding protein, structure, protein-RNA complex, RNA stem-loop, structural protein/RNA complex; NMR {Homo sapiens}
Probab=43.29 E-value=67 Score=23.21 Aligned_cols=58 Identities=21% Similarity=0.253 Sum_probs=39.5
Q ss_pred ccccccCCCCchHHHHHHHHHHhCCceEEecC--------CccEEEeCCHHHHHHHHHh-CCCccCCCC
Q 045796 59 LVGYLPFLGTDLYKSLTKLADAYGPIYKFWLA--------NKLFVVVSSSSIAKEMVRD-KDTIFSNRQ 118 (378)
Q Consensus 59 ~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g--------~~~~v~v~dpe~i~~vl~~-~~~~f~~r~ 118 (378)
++||+..- -....+.++..+||+|..+.+. +.-+|-..+++.++.++.. ++..+.+++
T Consensus 11 ~V~nLp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~F~~~~~A~~Ai~~l~g~~~~g~~ 77 (116)
T 2fy1_A 11 FIGGLNRE--TNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAKDMNGKSLHGKA 77 (116)
T ss_dssp EEECCTTT--CCHHHHHHHHHTSSCCSEEEEECSTTTTCCCEEEEECSSHHHHHHHHHHCSSCBCSSSB
T ss_pred EEeCCCCC--CCHHHHHHHHHhcCCEEEEEEEECCCCCcccEEEEEECCHHHHHHHHHHhCCCEECCEE
Confidence 45776542 1256678888999998777653 2346888899999999864 444454443
No 113
>2do4_A Squamous cell carcinoma antigen recognized by T- cells 3; RRM domaim, RDB, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=42.75 E-value=80 Score=21.75 Aligned_cols=58 Identities=19% Similarity=0.240 Sum_probs=38.9
Q ss_pred CcccccccCCCCchHHHHHHHHHHhCCceEEecC--------CccEEEeCCHHHHHHHHHh-CCCccCC
Q 045796 57 LPLVGYLPFLGTDLYKSLTKLADAYGPIYKFWLA--------NKLFVVVSSSSIAKEMVRD-KDTIFSN 116 (378)
Q Consensus 57 ~p~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g--------~~~~v~v~dpe~i~~vl~~-~~~~f~~ 116 (378)
.=++||+..- -....+.++..+||+|..+.+. +.-+|-..+++.++.++.. ++..+.+
T Consensus 19 ~l~v~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~l~g~~~~g 85 (100)
T 2do4_A 19 KLFISGLPFS--CTKEELEEICKAHGTVKDLRLVTNRAGKPKGLAYVEYENESQASQAVMKMDGMTIKE 85 (100)
T ss_dssp CEEEESCCTT--CCHHHHHHHHTTTSCEEEEEEEECTTSCEEEEEEEEESSHHHHHHHHHHHTTEESSS
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhCCCeEEEEEEECCCCCEEeEEEEEECCHHHHHHHHHHhCCCEECC
Confidence 3456777642 1255678888999998877753 2347888999999999854 4333433
No 114
>2cq3_A RNA-binding protein 9; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=42.71 E-value=69 Score=22.28 Aligned_cols=59 Identities=20% Similarity=0.215 Sum_probs=39.6
Q ss_pred CcccccccCCCCchHHHHHHHHHHhCCceEEecC-------CccEEEeCCHHHHHHHHHh-CCCccCCC
Q 045796 57 LPLVGYLPFLGTDLYKSLTKLADAYGPIYKFWLA-------NKLFVVVSSSSIAKEMVRD-KDTIFSNR 117 (378)
Q Consensus 57 ~p~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g-------~~~~v~v~dpe~i~~vl~~-~~~~f~~r 117 (378)
.=++||+..- -....+.++..+||+|..+.+. +.-+|-..+++.++.++.. ++..+.++
T Consensus 17 ~l~V~nlp~~--~t~~~l~~~f~~~G~v~~v~i~~~~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~ 83 (103)
T 2cq3_A 17 RLHVSNIPFR--FRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGR 83 (103)
T ss_dssp EEEEESCCTT--CCHHHHHHHGGGTSCEEEEEEECCTTTTCCEEEEEESCHHHHHHHHHHHTTCEETTE
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEecCCCCcEEEEEEECCHHHHHHHHHHhCCCEECCE
Confidence 3356777642 1245677888999999887753 2346788899999999864 44444443
No 115
>2wbr_A GW182, gawky, LD47780P; DNA-binding protein, RRM, RBD, TNRC6A, mirnas, P-bodies, argonaute, mRNA decay; NMR {Drosophila melanogaster}
Probab=42.71 E-value=53 Score=22.93 Aligned_cols=52 Identities=15% Similarity=0.046 Sum_probs=36.1
Q ss_pred CCcccccccCCCCchHHHHHHHHHHhCCceEEecC---CccEEEeCCHHHHHHHHHh
Q 045796 56 GLPLVGYLPFLGTDLYKSLTKLADAYGPIYKFWLA---NKLFVVVSSSSIAKEMVRD 109 (378)
Q Consensus 56 ~~p~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g---~~~~v~v~dpe~i~~vl~~ 109 (378)
+|-++||+..=. --..+.++..+||||..+++. |.-+|-..+++.++.....
T Consensus 8 ~wL~VgNL~~~~--te~~L~~lF~q~G~V~~~~l~~~kGfaFVey~~~~eA~~Ai~~ 62 (89)
T 2wbr_A 8 SWLLLKNLTAQI--DGPTLRTLCMQHGPLVSFHPYLNQGIALCKYTTREEANKAQMA 62 (89)
T ss_dssp CEEEEECCCTTC--CCHHHHHHHHHHSCEEEEEEETTTTEEEEEESSHHHHHHHHHH
T ss_pred ceEEEeCCCccC--CHHHHHHHHHhhCCEEEEEEcCCCcEEEEEECCHHHHHHHHHH
Confidence 355678876431 146688999999999887753 3347788888777776653
No 116
>2cqi_A Nucleolysin TIAR; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, ST genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=42.69 E-value=52 Score=22.94 Aligned_cols=57 Identities=16% Similarity=0.019 Sum_probs=38.6
Q ss_pred cccccccCCCCchHHHHHHHHHHhCCceEEecCC-------ccEEEeCCHHHHHHHHH-hCCCccCC
Q 045796 58 PLVGYLPFLGTDLYKSLTKLADAYGPIYKFWLAN-------KLFVVVSSSSIAKEMVR-DKDTIFSN 116 (378)
Q Consensus 58 p~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g~-------~~~v~v~dpe~i~~vl~-~~~~~f~~ 116 (378)
=++||+..- -....+.++..+||+|..+.+.. .-+|-..+++.++.++. -++..+.+
T Consensus 18 l~V~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g 82 (103)
T 2cqi_A 18 LYVGNLSRD--VTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAMNGRKILG 82 (103)
T ss_dssp EEEESCCTT--CCHHHHHHHHHHHSCEEEEEEECCCCSSCCEEEEEESSHHHHHHHHHHHTTEEETT
T ss_pred EEEeCCCcc--CCHHHHHHHHHhcCCEeEEEEEecCCCCCCEEEEEECCHHHHHHHHHHhCCCCcCC
Confidence 356777642 12566788889999988776532 34688889999999986 34333433
No 117
>3s6e_A RNA-binding protein 39; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-biology; HET: MSE CIT; 0.95A {Mus musculus} PDB: 2lq5_A
Probab=42.23 E-value=40 Score=24.67 Aligned_cols=68 Identities=12% Similarity=0.162 Sum_probs=43.0
Q ss_pred CCCCCCCcccccccCCCC--------chHHHHHHHHHHhCCceEEecC-----CccEEEeCCHHHHHHHHHh-CCCccCC
Q 045796 51 PPGPRGLPLVGYLPFLGT--------DLYKSLTKLADAYGPIYKFWLA-----NKLFVVVSSSSIAKEMVRD-KDTIFSN 116 (378)
Q Consensus 51 ~PgP~~~p~lG~~~~l~~--------~~~~~~~~~~~~yG~i~~~~~g-----~~~~v~v~dpe~i~~vl~~-~~~~f~~ 116 (378)
+|.|...=+|.|+..... .....+.+...+||+|..+.+. |.-+|-..+++.++..+.. ++..|.+
T Consensus 3 ~p~ps~vv~L~Nm~~~~e~~d~~~~~el~edl~~~f~kfG~V~~v~i~~~~~~G~~fV~f~~~e~A~~Ai~~lnG~~f~G 82 (114)
T 3s6e_A 3 QPLATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAVNALHGRWFAG 82 (114)
T ss_dssp CCCCCSEEEEESSCCTTTCCSTTHHHHHHHHHHHHHTTTTCCSEEEECTTCTTCCEEEECSSHHHHHHHHHHHTTCEETT
T ss_pred CCCCCcEEEEECCCChHHccChhHHHHHHHHHHHHHhccCCEEEEEEecCCCcEEEEEEECCHHHHHHHHHHhCCCEECC
Confidence 455555556677665421 2234566677799999888753 3346778899988888754 4445555
Q ss_pred CC
Q 045796 117 RQ 118 (378)
Q Consensus 117 r~ 118 (378)
|.
T Consensus 83 R~ 84 (114)
T 3s6e_A 83 KM 84 (114)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 118
>3s7r_A Heterogeneous nuclear ribonucleoprotein A/B; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG; 2.15A {Homo sapiens} PDB: 1hd0_A 1hd1_A
Probab=41.82 E-value=34 Score=23.04 Aligned_cols=53 Identities=15% Similarity=0.257 Sum_probs=36.7
Q ss_pred cccccccCCCCchHHHHHHHHHHhCCceEEecC---------CccEEEeCCHHHHHHHHHhCCC
Q 045796 58 PLVGYLPFLGTDLYKSLTKLADAYGPIYKFWLA---------NKLFVVVSSSSIAKEMVRDKDT 112 (378)
Q Consensus 58 p~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g---------~~~~v~v~dpe~i~~vl~~~~~ 112 (378)
=++||+..- -....+.++..+||+|..+.+. +.-+|-..+++.++.++...+.
T Consensus 14 l~V~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~~~~ 75 (87)
T 3s7r_A 14 MFVGGLSWD--TSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQKEH 75 (87)
T ss_dssp EEEECCCTT--CCHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSTHHHHHHHHSSCE
T ss_pred EEEeCCCCC--CCHHHHHHHHHhCCCEEEEEEeecCCCCccccEEEEEECCHHHHHHHHHhCCC
Confidence 356777642 1256677888999998777652 1236778899999999866443
No 119
>1oo0_B CG8781-PA, drosophila Y14; RNA recognition motif, splicing, protein complex, EXON junct complex, signaling protein; 1.85A {Drosophila melanogaster} SCOP: d.58.7.1 PDB: 2hyi_B* 2j0s_D* 2xb2_D*
Probab=41.80 E-value=59 Score=23.00 Aligned_cols=55 Identities=13% Similarity=0.037 Sum_probs=38.1
Q ss_pred ccccccCCCCchHHHHHHHHHHhCCceEEecC---------CccEEEeCCHHHHHHHHHh-CCCccC
Q 045796 59 LVGYLPFLGTDLYKSLTKLADAYGPIYKFWLA---------NKLFVVVSSSSIAKEMVRD-KDTIFS 115 (378)
Q Consensus 59 ~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g---------~~~~v~v~dpe~i~~vl~~-~~~~f~ 115 (378)
++||+..- -....+.++..+||+|..+.+. +.-+|-..+++.++.++.. ++..+.
T Consensus 30 ~V~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~Ai~~l~g~~~~ 94 (110)
T 1oo0_B 30 FVTSIHEE--AQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEALNGAEIM 94 (110)
T ss_dssp EEESCCTT--CCHHHHHHHHGGGSCEEEEECCBCTTTSSBCSEEEEEESSHHHHHHHHHHHTTCEET
T ss_pred EEeCCCCC--CCHHHHHHHHHhcCCEEEEEEEecCCCCCcceEEEEEECCHHHHHHHHHHcCCCEEC
Confidence 56777642 1255678888999999888763 2347888899999999874 443343
No 120
>2jwn_A Embryonic polyadenylate-binding protein 2-B; epabp2, poly(A) binding, structural genomics, protein structure initiative, PSI-2; NMR {Xenopus laevis}
Probab=41.60 E-value=37 Score=24.80 Aligned_cols=57 Identities=16% Similarity=0.254 Sum_probs=37.5
Q ss_pred ccccccCCCCchHHHHHHHHHHhCCceEEecCC---------ccEEEeCCHHHHHHHHHhCCCccCCC
Q 045796 59 LVGYLPFLGTDLYKSLTKLADAYGPIYKFWLAN---------KLFVVVSSSSIAKEMVRDKDTIFSNR 117 (378)
Q Consensus 59 ~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g~---------~~~v~v~dpe~i~~vl~~~~~~f~~r 117 (378)
++||+..- -....+.++..+||+|..+.+.. .=+|...+++.++.++.-++..+.++
T Consensus 40 ~V~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~l~g~~~~g~ 105 (124)
T 2jwn_A 40 YVGNVDYG--STAQDLEAHFSSCGSINRITILCDKFSGHPKGYAYIEFAERNSVDAAVAMDETVFRGR 105 (124)
T ss_dssp EEEEECTT--CCHHHHHHHHHTTSCEEEEEEEEECTTSSCEEEEEEEESSHHHHHHHHTTTTCEETTE
T ss_pred EEeCCCCC--CCHHHHHHHHHhcCCEEEEEEEecCCCCCcccEEEEEECCHHHHHHHHhcCCCeECCe
Confidence 44555432 12566888889999987776521 23688899999999994444444443
No 121
>2d9o_A DNAJ (HSP40) homolog, subfamily C, member 17; RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=41.59 E-value=70 Score=22.63 Aligned_cols=47 Identities=17% Similarity=0.268 Sum_probs=34.9
Q ss_pred HHHHHHHHHHhCCceEEecC----CccEEEeCCHHHHHHHHHhCCCccCCCC
Q 045796 71 YKSLTKLADAYGPIYKFWLA----NKLFVVVSSSSIAKEMVRDKDTIFSNRQ 118 (378)
Q Consensus 71 ~~~~~~~~~~yG~i~~~~~g----~~~~v~v~dpe~i~~vl~~~~~~f~~r~ 118 (378)
...+.++..+||+|..+++. |.=+|-..+++.++..+... ..+.+++
T Consensus 31 e~~L~~~F~~~G~V~~v~i~~~~rGfaFVeF~~~~~A~~Ai~~~-~~~~g~~ 81 (100)
T 2d9o_A 31 KDVLLRLLQKYGEVLNLVLSSKKPGTAVVEFATVKAAELAVQNE-VGLVDNP 81 (100)
T ss_dssp HHHHHHHHHTTSCEEEEEEESSSSSEEEEEESCHHHHHHHHHTC-CBCSSSB
T ss_pred HHHHHHHHHhcCCEEEEEEccCCCCEEEEEECCHHHHHHHHHhc-CCCCCCe
Confidence 67788999999999888763 23478888999999998763 2343443
No 122
>2jrs_A RNA-binding protein 39; RNA binding motif of RBM39_human (caper), RRM2 domain, solution structure, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=41.59 E-value=83 Score=22.30 Aligned_cols=57 Identities=25% Similarity=0.281 Sum_probs=38.4
Q ss_pred ccccccCCCCchHHHHHHHHHHhCCceEEecC---------CccEEEeCCHHHHHHHHHh-CCCccCCC
Q 045796 59 LVGYLPFLGTDLYKSLTKLADAYGPIYKFWLA---------NKLFVVVSSSSIAKEMVRD-KDTIFSNR 117 (378)
Q Consensus 59 ~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g---------~~~~v~v~dpe~i~~vl~~-~~~~f~~r 117 (378)
++||+..- -....+.++..+||+|..+.+. +.-+|-..+++.++.++.. ++..+.++
T Consensus 30 ~V~nLp~~--~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~F~~~~~A~~Ai~~l~g~~i~g~ 96 (108)
T 2jrs_A 30 YVGSLHFN--ITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGR 96 (108)
T ss_dssp EEECCCSS--CCHHHHHHHHTTTSCEEEEEEEEETTTTEEEEEEEEEESCHHHHHHHHHHHTTCCSSSS
T ss_pred EEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEEcCCCCccceEEEEEECCHHHHHHHHHHcCCCEECCE
Confidence 56777642 2255677888999998777653 2346888999999999863 44344443
No 123
>1p1t_A Cleavage stimulation factor, 64 kDa subunit; RNA recognition motif, C-terminal helix, N-terminal helix, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=41.26 E-value=68 Score=22.30 Aligned_cols=49 Identities=22% Similarity=0.392 Sum_probs=34.5
Q ss_pred ccccccCCCCchHHHHHHHHHHhCCceEEecC---------CccEEEeCCHHHHHHHHHh
Q 045796 59 LVGYLPFLGTDLYKSLTKLADAYGPIYKFWLA---------NKLFVVVSSSSIAKEMVRD 109 (378)
Q Consensus 59 ~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g---------~~~~v~v~dpe~i~~vl~~ 109 (378)
++||+..- -....+.++..+||+|..+.+. +.-+|-..+++.++.++..
T Consensus 12 ~V~nlp~~--~~~~~l~~~f~~~G~i~~~~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~ 69 (104)
T 1p1t_A 12 FVGNIPYE--ATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 69 (104)
T ss_dssp EEESCCTT--SCHHHHHHHHHTTSCCSEEEEEEETTTTEEEEEEEEECSCHHHHHHHHHH
T ss_pred EEeCCCCc--CCHHHHHHHHHhcCCeeEEEEEeCCCCCccceEEEEEECCHHHHHHHHHH
Confidence 45666532 1255678888999998777653 2336778899999999964
No 124
>1sjq_A Polypyrimidine tract-binding protein 1; babbab motif, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=40.75 E-value=86 Score=22.50 Aligned_cols=51 Identities=18% Similarity=0.266 Sum_probs=37.1
Q ss_pred CcccccccCCCCchHHHHHHHHHHhCCceEEecC---CccEEEeCCHHHHHHHHHh
Q 045796 57 LPLVGYLPFLGTDLYKSLTKLADAYGPIYKFWLA---NKLFVVVSSSSIAKEMVRD 109 (378)
Q Consensus 57 ~p~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g---~~~~v~v~dpe~i~~vl~~ 109 (378)
.=++||+..= -....+.++..+||+|..+.+. +.=+|-..+++.++..+..
T Consensus 18 ~LfV~nLp~~--vte~dL~~lF~~fG~V~~v~i~~~kGfaFVeF~~~~~A~~Ai~~ 71 (105)
T 1sjq_A 18 VIHIRKLPID--VTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVNY 71 (105)
T ss_dssp EEEECSCCTT--SCHHHHHHHHHHHCCEEEEEEETTTTEEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhcCCEEEEEEEcCCCEEEEEECCHHHHHHHHHH
Confidence 3456877642 1255688889999999888754 3347888999999988863
No 125
>1sjr_A Polypyrimidine tract-binding protein 1; extended babbab motif, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 2adb_A
Probab=40.69 E-value=77 Score=24.94 Aligned_cols=49 Identities=12% Similarity=0.135 Sum_probs=35.6
Q ss_pred ccccccCCCCchHHHHHHHHHHhCCceEEecC-----CccEEEeCCHHHHHHHHHh
Q 045796 59 LVGYLPFLGTDLYKSLTKLADAYGPIYKFWLA-----NKLFVVVSSSSIAKEMVRD 109 (378)
Q Consensus 59 ~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g-----~~~~v~v~dpe~i~~vl~~ 109 (378)
++||+..= -..+.+.++..+||+|.++++. +.-+|-..|++.+++.+..
T Consensus 50 ~VgNL~~~--vted~L~~~Fs~fG~V~~V~i~~k~~rgfAFVeF~d~~~A~~Ai~~ 103 (164)
T 1sjr_A 50 IVENLFYP--VTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLS 103 (164)
T ss_dssp EECSCCSC--CCHHHHHHHHHHHSCEEEEEEEESSSCEEEEEEESCHHHHHHHHHH
T ss_pred EEeCcCCC--CCHHHHHHHHHhcCCEEEEEEEeCCCCCEEEEEECCHHHHHHHHHH
Confidence 46777532 2256688889999999887763 2357888899999888864
No 126
>2dnr_A Synaptojanin-1; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=40.22 E-value=60 Score=22.78 Aligned_cols=48 Identities=19% Similarity=0.275 Sum_probs=34.8
Q ss_pred hHHHHHHHHHHhCCceEEec-CCccEEEeCCHHHHHHHHHhCCCccCCC
Q 045796 70 LYKSLTKLADAYGPIYKFWL-ANKLFVVVSSSSIAKEMVRDKDTIFSNR 117 (378)
Q Consensus 70 ~~~~~~~~~~~yG~i~~~~~-g~~~~v~v~dpe~i~~vl~~~~~~f~~r 117 (378)
+...+.+...+||.|.-+++ .++-+|...|.+.+..++.-++....+|
T Consensus 28 l~~~L~~~F~~~G~Vi~vr~~~d~~fVtF~d~~sAlaAi~mnG~~v~Gr 76 (91)
T 2dnr_A 28 LIDELLQQFASFGEVILIRFVEDKMWVTFLEGSSALNVLSLNGKELLNR 76 (91)
T ss_dssp HHHHHHHHHHTTCCEEEEEECSSSEEEEESSHHHHHHGGGGTTCEETTE
T ss_pred HHHHHHHHHHhCCCeEEEEEecCCEEEEECChHHHHHHHhcCCeEeCCe
Confidence 34556677778999888884 4556888889999999987655444443
No 127
>2jvo_A Nucleolar protein 3; nucleus, phosphorylation, ribonucleoprotein, ribosome biogenesis, RNA-binding, rRNA processing; NMR {Saccharomyces cerevisiae} PDB: 2osq_A
Probab=40.10 E-value=53 Score=23.45 Aligned_cols=56 Identities=18% Similarity=0.315 Sum_probs=38.4
Q ss_pred ccccccCCCCchHHHHHHHHHHhCCceEEec-CCccEEEeCCHHHHHHHHHh-CCCccCC
Q 045796 59 LVGYLPFLGTDLYKSLTKLADAYGPIYKFWL-ANKLFVVVSSSSIAKEMVRD-KDTIFSN 116 (378)
Q Consensus 59 ~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~-g~~~~v~v~dpe~i~~vl~~-~~~~f~~ 116 (378)
++||+..- -....+.++..+||+|..+.+ -+.-+|...+++.++.++.. ++..+.+
T Consensus 35 ~V~nLp~~--~t~~~L~~~F~~~G~i~~v~i~kg~afV~f~~~~~A~~Ai~~l~g~~~~g 92 (108)
T 2jvo_A 35 FVRPFPLD--VQESELNEIFGPFGPMKEVKILNGFAFVEFEEAESAAKAIEEVHGKSFAN 92 (108)
T ss_dssp EECSSCTT--CCHHHHHHHHTTTSCCCEEEEETTEEEEECSSHHHHHHHHHHHTTCEETT
T ss_pred EEECCCCC--CCHHHHHHHHHhcCCEEEEEEECCEEEEEECCHHHHHHHHHHcCCCEECC
Confidence 45766532 125568888899999887775 34557888899999999864 4444433
No 128
>2cqd_A RNA-binding region containing protein 1; RNA recognition motif, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=39.63 E-value=62 Score=23.20 Aligned_cols=58 Identities=26% Similarity=0.381 Sum_probs=40.0
Q ss_pred cccccccCCCCchHHHHHHHHHHhCCceEEecCC---------ccEEEeCCHHHHHHHHHhCCCccCCC
Q 045796 58 PLVGYLPFLGTDLYKSLTKLADAYGPIYKFWLAN---------KLFVVVSSSSIAKEMVRDKDTIFSNR 117 (378)
Q Consensus 58 p~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g~---------~~~v~v~dpe~i~~vl~~~~~~f~~r 117 (378)
=++||+..- -....+.++..+||+|..+++.. .-+|-..+++.++.++......+.++
T Consensus 20 l~V~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~Ai~~~~~~~~g~ 86 (116)
T 2cqd_A 20 IFVGGLPYH--TTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPNPIIDGR 86 (116)
T ss_dssp EEEECCCSS--CCHHHHHHHHHTTSCEEEEEESCCSSSCCCCSEEEEEESSHHHHHHHHTCSSCEETTE
T ss_pred EEEeCCCCC--CCHHHHHHHHHhCCCeeEEEEEEcCCCCccceEEEEEECCHHHHHHHHHhCCCcCCCE
Confidence 356777643 12566788889999998877643 23688889999999997654444433
No 129
>1x4g_A Nucleolysin TIAR; structural genomics, RRM domain, TIA-1 related protein, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=39.55 E-value=78 Score=22.32 Aligned_cols=57 Identities=14% Similarity=0.127 Sum_probs=38.9
Q ss_pred ccccccCCCCchHHHHHHHHHHhCCceEEecC---CccEEEeCCHHHHHHHHHh-CCCccCCC
Q 045796 59 LVGYLPFLGTDLYKSLTKLADAYGPIYKFWLA---NKLFVVVSSSSIAKEMVRD-KDTIFSNR 117 (378)
Q Consensus 59 ~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g---~~~~v~v~dpe~i~~vl~~-~~~~f~~r 117 (378)
++||+..- --...+.++..+||+|..+.+. +.-+|-..+++.++.++.. ++..+.++
T Consensus 29 ~V~nl~~~--~t~~~l~~~F~~~G~i~~v~i~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~ 89 (109)
T 1x4g_A 29 YCGGIASG--LTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGH 89 (109)
T ss_dssp EEECCSSC--CCHHHHHHHHHHHSCEEEEEEETTTTEEEEEESSHHHHHHHHHHHTTCEETTE
T ss_pred EEeCCCCC--CCHHHHHHHHHhcCCeEEEEEeCCCCEEEEEECCHHHHHHHHHHcCCCEECCc
Confidence 55777642 1256678888999999888763 3447888899999998854 44344433
No 130
>2dgv_A HnRNP M, heterogeneous nuclear ribonucleoprotein M; RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2dh9_A
Probab=39.54 E-value=85 Score=21.11 Aligned_cols=58 Identities=22% Similarity=0.211 Sum_probs=39.1
Q ss_pred ccccccCCCCchHHHHHHHHHHhCCceEEecC-------CccEEEeCCHHHHHHHHHh-CCCccCCCC
Q 045796 59 LVGYLPFLGTDLYKSLTKLADAYGPIYKFWLA-------NKLFVVVSSSSIAKEMVRD-KDTIFSNRQ 118 (378)
Q Consensus 59 ~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g-------~~~~v~v~dpe~i~~vl~~-~~~~f~~r~ 118 (378)
++||+..- -....+.++..+||+|..+.+. +.-+|-..+++.++.++.. ++..+.++.
T Consensus 12 ~V~nlp~~--~t~~~l~~~f~~~G~v~~~~i~~~~g~~~g~afV~f~~~~~a~~a~~~l~g~~~~g~~ 77 (92)
T 2dgv_A 12 FVRNLPFD--FTWKMLKDKFNECGHVLYADIKMENGKSKGCGVVKFESPEVAERACRMMNGMKLSGRE 77 (92)
T ss_dssp EECSCCTT--CCHHHHHHHHHTTSCEEEEEEEESSSCEEEEEEEEESSHHHHHHHHHHHTTCCBTTBC
T ss_pred EEeCCCCC--CCHHHHHHHHHhcCCEEEEEEEccCCCcceEEEEEECCHHHHHHHHHHhCCCEECCcE
Confidence 56777642 2256688888999998777653 2346778899999999874 444454443
No 131
>2ytc_A PRE-mRNA-splicing factor RBM22; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=39.32 E-value=81 Score=20.82 Aligned_cols=51 Identities=16% Similarity=0.076 Sum_probs=36.7
Q ss_pred CcccccccCCCCchHHHHHHHHHHhCCceEEecC---CccEEEeCCHHHHHHHHHh
Q 045796 57 LPLVGYLPFLGTDLYKSLTKLADAYGPIYKFWLA---NKLFVVVSSSSIAKEMVRD 109 (378)
Q Consensus 57 ~p~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g---~~~~v~v~dpe~i~~vl~~ 109 (378)
.=++||+..- -....+.++..+||+|..+.+. +.-+|-..+++.++.++..
T Consensus 14 ~l~V~~l~~~--~t~~~l~~~f~~~G~i~~~~~~~~kg~afV~f~~~~~A~~a~~~ 67 (85)
T 2ytc_A 14 TLYVGGLGDT--ITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEK 67 (85)
T ss_dssp CEEEECCTTT--SCHHHHHHHHHTTSCEEEEEEEGGGTEEEEEESSHHHHHHHHHT
T ss_pred EEEEcCCCCC--CCHHHHHHHHHhCCCEeEEEEECCCCEEEEEECCHHHHHHHHHH
Confidence 3356777642 2256678888999998887753 3346788899999999874
No 132
>2div_A TRNA selenocysteine associated protein; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=39.28 E-value=91 Score=21.37 Aligned_cols=60 Identities=10% Similarity=0.046 Sum_probs=39.9
Q ss_pred CcccccccCCCCchHHHHHHHHHHhCCce-EEecC---------CccEEEeCCHHHHHHHHHh-CCCccCCCC
Q 045796 57 LPLVGYLPFLGTDLYKSLTKLADAYGPIY-KFWLA---------NKLFVVVSSSSIAKEMVRD-KDTIFSNRQ 118 (378)
Q Consensus 57 ~p~lG~~~~l~~~~~~~~~~~~~~yG~i~-~~~~g---------~~~~v~v~dpe~i~~vl~~-~~~~f~~r~ 118 (378)
.=++||+..- -....+.++..+||+|. .+++. +.-+|-..+++.++.++.. ++..+.++.
T Consensus 11 ~l~V~nLp~~--~t~~~l~~~F~~~G~i~~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~~ 81 (99)
T 2div_A 11 SLWMGDLEPY--MDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKPLPGAT 81 (99)
T ss_dssp EEEECSCCTT--CCHHHHHHHHHHTTCCCCEEEEEECSSSCCEEEEEEEECSCHHHHHHHHHTTTTSEESSCS
T ss_pred EEEEeCCCCC--CCHHHHHHHHHHhCCcceEEEEeecCCCCCcCCEEEEEeCCHHHHHHHHHHHcCCccCCCC
Confidence 3456777643 12566788889999988 77653 1236788899999999874 344444443
No 133
>3md1_A Nuclear and cytoplasmic polyadenylated RNA-bindin PUB1; RRM, RBD, RNP, poly(U) binding, nucleus, RNA-binding, binding protein; 1.60A {Saccharomyces cerevisiae} SCOP: d.58.7.0
Probab=39.02 E-value=49 Score=21.84 Aligned_cols=46 Identities=11% Similarity=0.079 Sum_probs=32.5
Q ss_pred HHHHHHHHHHhCCceEEecC---------CccEEEeCCHHHHHHHHHh-CCCccCC
Q 045796 71 YKSLTKLADAYGPIYKFWLA---------NKLFVVVSSSSIAKEMVRD-KDTIFSN 116 (378)
Q Consensus 71 ~~~~~~~~~~yG~i~~~~~g---------~~~~v~v~dpe~i~~vl~~-~~~~f~~ 116 (378)
...+.++..+||+|..+.+. +.-+|-..+++.++.++.. ++..+.+
T Consensus 15 ~~~l~~~f~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~a~~a~~~l~g~~~~g 70 (83)
T 3md1_A 15 DETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNG 70 (83)
T ss_dssp HHHHHHHHTTSTTEEEEEEEECTTTCCEEEEEEEEESCHHHHHHHHHHHTTCEETT
T ss_pred HHHHHHHHHhcCCeeEEEEEEcCCCCCccceEEEEECCHHHHHHHHHHhcCCeeCC
Confidence 45677888899998877643 1236888899999999874 4434433
No 134
>2cpf_A RNA binding motif protein 19; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=38.68 E-value=79 Score=21.66 Aligned_cols=58 Identities=14% Similarity=0.163 Sum_probs=39.0
Q ss_pred cccccccCCCCchHHHHHHHHHHhCCceEEecC------------CccEEEeCCHHHHHHHHHh-CCCccCCC
Q 045796 58 PLVGYLPFLGTDLYKSLTKLADAYGPIYKFWLA------------NKLFVVVSSSSIAKEMVRD-KDTIFSNR 117 (378)
Q Consensus 58 p~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g------------~~~~v~v~dpe~i~~vl~~-~~~~f~~r 117 (378)
=++||+..- -....+.++..+||+|..+.+. +.-+|-..+++.++.++.. ++..+.++
T Consensus 8 l~V~nLp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~~gt~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~ 78 (98)
T 2cpf_A 8 LFIKNLNFS--TTEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQLQGHTVDGH 78 (98)
T ss_dssp EEEESCCTT--CCHHHHHHHHHTTSCEEEEEEEEEECTTCCEEEEEEEEEEESSHHHHHHHHHHSTTCEETTE
T ss_pred EEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEecCCCCCCcCcccEEEEEECCHHHHHHHHHHhCCCeeCCe
Confidence 356777642 1256678888999998777653 2346788899999999975 44444433
No 135
>1uaw_A Mouse-musashi-1; RNP-type structure, RNA binding protein; NMR {Mus musculus} SCOP: d.58.7.1
Probab=38.68 E-value=32 Score=22.39 Aligned_cols=55 Identities=11% Similarity=0.190 Sum_probs=34.0
Q ss_pred cccccCCCCchHHHHHHHHHHhCCceEEecCC---------ccEEEeCCHHHHHHHHHhCCCccCC
Q 045796 60 VGYLPFLGTDLYKSLTKLADAYGPIYKFWLAN---------KLFVVVSSSSIAKEMVRDKDTIFSN 116 (378)
Q Consensus 60 lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g~---------~~~v~v~dpe~i~~vl~~~~~~f~~ 116 (378)
+||+..- -....+.++..+||+|..+.+.. .-+|-..+++.++.++......+.+
T Consensus 5 v~nlp~~--~t~~~l~~~F~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~a~~a~~~~~~~~~g 68 (77)
T 1uaw_A 5 IGGLSWQ--TTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDS 68 (77)
T ss_dssp EESCCSS--CCSHHHHHHHTTTSCCCCEEEECCCCSSSCSSEEEECCCCTTHHHHHHHTTTCCCSS
T ss_pred EeCCCCC--CCHHHHHHHHHhcCCEEEEEEecCCCCCCcCceEEEEEcCHHHHHHHHHhCCCccCC
Confidence 4555432 11445777888999987665421 2356677899999888765433333
No 136
>2ywk_A Putative RNA-binding protein 11; RRM-domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.54A {Homo sapiens}
Probab=38.62 E-value=45 Score=22.80 Aligned_cols=56 Identities=18% Similarity=0.073 Sum_probs=38.0
Q ss_pred cccccccCCCCchHHHHHHHHHHhCCceEEecCC--------ccEEEeCCHHHHHHHHHh-CCCccC
Q 045796 58 PLVGYLPFLGTDLYKSLTKLADAYGPIYKFWLAN--------KLFVVVSSSSIAKEMVRD-KDTIFS 115 (378)
Q Consensus 58 p~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g~--------~~~v~v~dpe~i~~vl~~-~~~~f~ 115 (378)
-++||+..- -....+.++..+||+|..+++.. .-+|-..+++.++.++.. ++..+.
T Consensus 19 l~v~nlp~~--~~~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~l~g~~~~ 83 (95)
T 2ywk_A 19 VFVGNLEAR--VREEILYELFLQAGPLTKVTICKDREGKPKSFGFVCFKHPESVSYAIALLNGIRLY 83 (95)
T ss_dssp EEEECCCTT--CCHHHHHHHHGGGSCEEEEEEEECTTSCEEEEEEEEESSTHHHHHHHHHHTTCEET
T ss_pred EEEECCCCC--CCHHHHHHHHHhcCCEEEEEEEECCCCCCceEEEEEECCHHHHHHHHHHhCCCEEC
Confidence 356777643 12556888889999998877532 236788899999999873 433343
No 137
>2rs2_A Musashi-1, RNA-binding protein musashi homolog 1; protein-RNA complex, RRM, RBD, RNA binding protein- complex; NMR {Mus musculus}
Probab=38.58 E-value=59 Score=23.17 Aligned_cols=57 Identities=11% Similarity=0.163 Sum_probs=39.1
Q ss_pred CcccccccCCCCchHHHHHHHHHHhCCceEEecCC---------ccEEEeCCHHHHHHHHHhCCCccC
Q 045796 57 LPLVGYLPFLGTDLYKSLTKLADAYGPIYKFWLAN---------KLFVVVSSSSIAKEMVRDKDTIFS 115 (378)
Q Consensus 57 ~p~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g~---------~~~v~v~dpe~i~~vl~~~~~~f~ 115 (378)
.=++||+..- -....+.++..+||+|..+.+.. .-+|...+++.++.++...+..+.
T Consensus 27 ~lfV~nLp~~--~te~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~afV~f~~~~~A~~Ai~~~~~~l~ 92 (109)
T 2rs2_A 27 KMFIGGLSWQ--TTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELD 92 (109)
T ss_dssp CEEEESCCTT--CCHHHHHHHHTTTSCEEEEEECCCTTTCCCTTCEEEEESSHHHHHHHHHSSCEEET
T ss_pred EEEEeCCCCC--CCHHHHHHHHHccCCeEEEEEEECCCCCCcCcEEEEEECCHHHHHHHHHHCCCcCC
Confidence 3356777532 12556788889999998877532 347888999999999976543333
No 138
>3bs9_A Nucleolysin TIA-1 isoform P40; RNA recognition motif, RRM, RNA binding domain, RBD, RNA splicing, apoptosis, phosphoprotein, RNA-binding; 1.95A {Homo sapiens}
Probab=38.05 E-value=48 Score=22.16 Aligned_cols=49 Identities=16% Similarity=0.110 Sum_probs=34.8
Q ss_pred ccccccCCCCchHHHHHHHHHHhCCceEEecCC---------ccEEEeCCHHHHHHHHHh
Q 045796 59 LVGYLPFLGTDLYKSLTKLADAYGPIYKFWLAN---------KLFVVVSSSSIAKEMVRD 109 (378)
Q Consensus 59 ~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g~---------~~~v~v~dpe~i~~vl~~ 109 (378)
++||+..- -....+.++..+||+|..+.+.. .-+|-..+++.++.++..
T Consensus 10 ~v~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 67 (87)
T 3bs9_A 10 FVGDLSPE--ITTAAIAAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 67 (87)
T ss_dssp EEESCCTT--CCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEeCCCCC--CCHHHHHHHHHhcCCEeEEEEEecCCCCccceEEEEEECCHHHHHHHHHH
Confidence 45776542 12556788889999988776522 236788899999999874
No 139
>2lea_A Serine/arginine-rich splicing factor 2; SR protein, RNA binding protein; NMR {Homo sapiens} PDB: 2leb_A 2lec_A
Probab=38.01 E-value=1e+02 Score=22.90 Aligned_cols=58 Identities=16% Similarity=0.285 Sum_probs=39.8
Q ss_pred cccccccCCCCchHHHHHHHHHHhCCceEEecCC---------ccEEEeCCHHHHHHHHHh-CCCccCCC
Q 045796 58 PLVGYLPFLGTDLYKSLTKLADAYGPIYKFWLAN---------KLFVVVSSSSIAKEMVRD-KDTIFSNR 117 (378)
Q Consensus 58 p~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g~---------~~~v~v~dpe~i~~vl~~-~~~~f~~r 117 (378)
=++||+..- -....+.++..+||+|..+.+.. .-+|-..+++.++.++.. ++..+.++
T Consensus 50 l~V~nLp~~--~te~~L~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~F~~~~~A~~Ai~~l~g~~i~g~ 117 (135)
T 2lea_A 50 LKVDNLTYR--TSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGR 117 (135)
T ss_dssp EEEECCCSS--CHHHHHHHHHGGGSCCSEEECCCCSSSSSCCSCCEEECSCHHHHHHHHTTTTTCCSSSS
T ss_pred EEEeCCCCC--CCHHHHHHHHHhcCCEEEEEEEecCCCCccceEEEEEECCHHHHHHHHHHcCCCEECCE
Confidence 356776542 22566788889999998887632 247888999999999964 34344443
No 140
>2kn4_A Immunoglobulin G-binding protein G, splicing FACT arginine/serine-rich 2, S35, splicing factor SC35,; RRM domain, cell WALL; NMR {Streptococcus SP}
Probab=37.40 E-value=1.2e+02 Score=23.05 Aligned_cols=58 Identities=16% Similarity=0.308 Sum_probs=39.8
Q ss_pred ccccccCCCCchHHHHHHHHHHhCCceEEecCC---------ccEEEeCCHHHHHHHHHh-CCCccCCCC
Q 045796 59 LVGYLPFLGTDLYKSLTKLADAYGPIYKFWLAN---------KLFVVVSSSSIAKEMVRD-KDTIFSNRQ 118 (378)
Q Consensus 59 ~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g~---------~~~v~v~dpe~i~~vl~~-~~~~f~~r~ 118 (378)
++||+..- -....+.++..+||+|..+.+.. .-+|-..+++.++.++.. ++..+.+++
T Consensus 74 ~v~nl~~~--~~~~~l~~~F~~~G~v~~~~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~~ 141 (158)
T 2kn4_A 74 KVDNLTYR--TSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRE 141 (158)
T ss_dssp EEESCCTT--CCHHHHHHHHHHHSCEEEEECCCCSSCTTSCCEEEEEESBHHHHHHHHHHSTTEESSSSE
T ss_pred EEeCCCCC--CCHHHHHHHHHhcCCeEEEEEeecCCCCccceEEEEEECCHHHHHHHHHHhCCCEECCeE
Confidence 55766542 12566788889999998887643 236888999999999975 444444443
No 141
>1wg5_A Heterogeneous nuclear ribonucleoprotein H; structural genomics, RRM domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=36.93 E-value=68 Score=22.50 Aligned_cols=58 Identities=17% Similarity=0.227 Sum_probs=39.5
Q ss_pred ccccccCCCCchHHHHHHHHHHhCCceE-EecC--------CccEEEeCCHHHHHHHHHhCCCccCCCC
Q 045796 59 LVGYLPFLGTDLYKSLTKLADAYGPIYK-FWLA--------NKLFVVVSSSSIAKEMVRDKDTIFSNRQ 118 (378)
Q Consensus 59 ~lG~~~~l~~~~~~~~~~~~~~yG~i~~-~~~g--------~~~~v~v~dpe~i~~vl~~~~~~f~~r~ 118 (378)
++||+..-. ....+.++..+||+|.. +.+. |.-+|-..+++.++..+..++..+.+|.
T Consensus 19 ~V~nLp~~~--te~~l~~~F~~~G~v~~~v~i~~~~~g~~~G~afV~F~~~~~a~~A~~~~~~~~~gr~ 85 (104)
T 1wg5_A 19 RLRGLPFGC--SKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRY 85 (104)
T ss_dssp EEESCCTTC--CHHHHHHHTTTCCEEEEEEECCBCSSSCBCSEEEEEESSHHHHHHHHTTTTCCSSSSC
T ss_pred EEeCCCCCC--CHHHHHHHHHhcCCcceeEEEEECCCCCcceEEEEEECCHHHHHHHHHhCcchhCCcE
Confidence 557766431 25567888889998754 4431 3357888999999999987655555553
No 142
>3v4m_A Splicing factor U2AF 65 kDa subunit; canonical RNA binding protein, RNA splicing, structural GENO joint center for structural genomics, JCSG; HET: MSE; 1.80A {Mus musculus} PDB: 1o0p_A 1opi_A
Probab=36.72 E-value=69 Score=22.78 Aligned_cols=48 Identities=19% Similarity=0.302 Sum_probs=33.3
Q ss_pred HHHHHHHHHHhCCceEEecC-----------CccEEEeCCHHHHHHHHHh-CCCccCCCC
Q 045796 71 YKSLTKLADAYGPIYKFWLA-----------NKLFVVVSSSSIAKEMVRD-KDTIFSNRQ 118 (378)
Q Consensus 71 ~~~~~~~~~~yG~i~~~~~g-----------~~~~v~v~dpe~i~~vl~~-~~~~f~~r~ 118 (378)
...+.+...+||+|..+.+. |.-+|-..+++.++..+.. ++..|.+|+
T Consensus 29 ~~dl~~~f~k~G~V~~v~i~~~~~~~~~~~~G~~fV~f~~~~~A~~Ai~~lnG~~f~GR~ 88 (105)
T 3v4m_A 29 VEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANRV 88 (105)
T ss_dssp HHHHHHHHHTTSCEEEEECCCCBTTBCCTTTTEEEEEESSHHHHHHHHHHHTTCEETTEE
T ss_pred HHHHHHHHHccCCEEEEEEeccCCCCCcCCcEEEEEEECCHHHHHHHHHHhCCCEeCCCE
Confidence 35677777899999888763 2235778899998888754 444555554
No 143
>2cph_A RNA binding motif protein 19; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=36.60 E-value=1.1e+02 Score=21.35 Aligned_cols=60 Identities=23% Similarity=0.297 Sum_probs=41.3
Q ss_pred CcccccccCCCCchHHHHHHHHHHhCCceEEecCCc----------cEEEeCCHHHHHHHHHh--CCCccCCCC
Q 045796 57 LPLVGYLPFLGTDLYKSLTKLADAYGPIYKFWLANK----------LFVVVSSSSIAKEMVRD--KDTIFSNRQ 118 (378)
Q Consensus 57 ~p~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g~~----------~~v~v~dpe~i~~vl~~--~~~~f~~r~ 118 (378)
.=++||+..- -....+.++..+||+|..+.+... -+|-..+++.++.++.. ++..+.+++
T Consensus 17 ~l~V~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~~g~afV~f~~~~~a~~A~~~l~~~~~~~g~~ 88 (107)
T 2cph_A 17 KILVRNIPFQ--ANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFNALCHSTHLYGRR 88 (107)
T ss_dssp CEEEESCCTT--CCHHHHHHHHHTTSCEEEEECCCCCSSSCSSCSEEEEEESSHHHHHHHHHHHHTCCBSSSCB
T ss_pred EEEEeCCCCc--CCHHHHHHHHHccCCeEEEEEecCCCCCCCcCceEEEEECCHHHHHHHHHHhccCCeECCCE
Confidence 3356777643 125568888899999988876432 36778899999999875 455555443
No 144
>2i2y_A Fusion protein consists of immunoglobin G- binding protein G and splicing factor,...; protein-RNA complex RRM alpha-beta sandwich BETA1-alpha1- BETA2-BETA3-alpha2-BETA4; NMR {Streptococcus SP} PDB: 2i38_A
Probab=36.49 E-value=1.3e+02 Score=22.52 Aligned_cols=59 Identities=25% Similarity=0.371 Sum_probs=40.0
Q ss_pred cccccccCCCCchHHHHHHHHHHhCCceEEecC----CccEEEeCCHHHHHHHHHh-CCCccCCCC
Q 045796 58 PLVGYLPFLGTDLYKSLTKLADAYGPIYKFWLA----NKLFVVVSSSSIAKEMVRD-KDTIFSNRQ 118 (378)
Q Consensus 58 p~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g----~~~~v~v~dpe~i~~vl~~-~~~~f~~r~ 118 (378)
-++||+..-. ....+.++..+||+|..+.+. +.-+|-..+++.++..+.. ++..+.+++
T Consensus 76 l~V~nl~~~~--t~~~l~~~F~~~G~i~~v~i~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~~ 139 (150)
T 2i2y_A 76 VYVGNLGNNG--NKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRTLCGCR 139 (150)
T ss_dssp EEEESCCSCC--SCHHHHHHHHHHSCEEEEEECSSSCSEEEEEESSHHHHHHHHHHHSSSCSSSSC
T ss_pred EEEeCCCCCC--CHHHHHHHHHhhCCEEEEEEeeCCCcEEEEEECCHHHHHHHHHHcCCCEECCeE
Confidence 3567776431 145577888999999888763 3447888899999999864 444444443
No 145
>2cq4_A RNA binding motif protein 23; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=36.35 E-value=37 Score=24.34 Aligned_cols=51 Identities=10% Similarity=0.002 Sum_probs=35.0
Q ss_pred ccccccCCCCchHHHHHHHHHHhCCceEEecC---------CccEEEeCCHHHHHHHHHhCC
Q 045796 59 LVGYLPFLGTDLYKSLTKLADAYGPIYKFWLA---------NKLFVVVSSSSIAKEMVRDKD 111 (378)
Q Consensus 59 ~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g---------~~~~v~v~dpe~i~~vl~~~~ 111 (378)
++||+..- -....+.++..+||+|..+.+. +.-+|-..+++.++.++.-++
T Consensus 29 ~V~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~l~g 88 (114)
T 2cq4_A 29 FCMQLAAR--IRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIGLTG 88 (114)
T ss_dssp EEESCCTT--CCHHHHHHHHTTTSCEEEEEECCSCCSSSCCCCEEEEESCGGGHHHHHHHTT
T ss_pred EEeCCCCC--CCHHHHHHHHHhCCCEeEEEEEecCCCCccCcEEEEEeCcHHHHHHHHHcCC
Confidence 45666532 1245678888999999888763 234677889999988884443
No 146
>1m46_B IQ4, IQ4 motif from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle protein; 2.10A {Saccharomyces cerevisiae}
Probab=36.08 E-value=26 Score=17.35 Aligned_cols=12 Identities=33% Similarity=0.376 Sum_probs=9.7
Q ss_pred hHHHHHHHHHHH
Q 045796 345 VEMKKVQAELAE 356 (378)
Q Consensus 345 ~iq~kl~~Ei~~ 356 (378)
..|.|+|+|+.+
T Consensus 8 nlqkkirkelkq 19 (26)
T 1m46_B 8 NLQKKIRKELKQ 19 (26)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 468999999864
No 147
>3p5t_L Cleavage and polyadenylation specificity factor S; RRM domain, poly(A) site recognition, RNA, nuclear, RNA BIND protein; 2.70A {Homo sapiens} PDB: 3p6y_C
Probab=36.03 E-value=61 Score=21.97 Aligned_cols=58 Identities=17% Similarity=0.233 Sum_probs=35.7
Q ss_pred ccccccCCCCchHHHHHHHHHHhC--CceEEecCC---------ccEEEeCCHHHHHHHHHh-CCCccCCCC
Q 045796 59 LVGYLPFLGTDLYKSLTKLADAYG--PIYKFWLAN---------KLFVVVSSSSIAKEMVRD-KDTIFSNRQ 118 (378)
Q Consensus 59 ~lG~~~~l~~~~~~~~~~~~~~yG--~i~~~~~g~---------~~~v~v~dpe~i~~vl~~-~~~~f~~r~ 118 (378)
++||+..- -....+.++..+|| +|..+++.. .-+|-..+++.++..+.. ++..+.+|.
T Consensus 5 ~V~nL~~~--~t~~~l~~~F~~~G~~~v~~v~i~~~~~~g~~kG~afV~f~~~~~a~~Ai~~l~g~~~~gr~ 74 (90)
T 3p5t_L 5 YIGNLTWW--TTDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALVGVGSEASSKKLMDLLPKRELHGQN 74 (90)
T ss_dssp EEESCCTT--CCHHHHHHHHHTTTCCCCCCEEEEECTTTCCEEEEEEECC-CHHHHHHHHHHGGGSCSSSCC
T ss_pred EEeCCCCC--CCHHHHHHHHHHhCCCceEEEEEEecCCCCccCcEEEEEECCHHHHHHHHHHcCCCeeCCEE
Confidence 35665532 12566788889999 876665421 236778899999998853 333454443
No 148
>1x4c_A Splicing factor, arginine/serine-rich 1; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=35.67 E-value=1.1e+02 Score=21.56 Aligned_cols=49 Identities=16% Similarity=0.051 Sum_probs=36.7
Q ss_pred ccccccCCCCchHHHHHHHHHHhCCceEEecC--CccEEEeCCHHHHHHHHHh
Q 045796 59 LVGYLPFLGTDLYKSLTKLADAYGPIYKFWLA--NKLFVVVSSSSIAKEMVRD 109 (378)
Q Consensus 59 ~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g--~~~~v~v~dpe~i~~vl~~ 109 (378)
++||+..- .....+.++..+||+|..+.+. +.-+|-..+++.++..+..
T Consensus 19 ~V~nLp~~--~t~~~l~~~F~~~G~i~~~~i~~~g~afV~f~~~~~a~~Ai~~ 69 (108)
T 1x4c_A 19 VVSGLPPS--GSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRK 69 (108)
T ss_dssp EEESCCSS--CCHHHHHHHHGGGSCEEEEEEETTTEEEEEESSHHHHHHHHHH
T ss_pred EEeCCCCC--CCHHHHHHHHHhcCCEeEEEEecCCEEEEEECCHHHHHHHHHH
Confidence 56777642 2256678888999998887753 4567888999999999874
No 149
>1x4b_A Heterogeneous nuclear ribonucleoproteins A2/B1; structure genomics, RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=35.63 E-value=38 Score=24.40 Aligned_cols=57 Identities=19% Similarity=0.244 Sum_probs=38.8
Q ss_pred ccccccCCCCchHHHHHHHHHHhCCceEEecCC---------ccEEEeCCHHHHHHHHHhCCCccCCC
Q 045796 59 LVGYLPFLGTDLYKSLTKLADAYGPIYKFWLAN---------KLFVVVSSSSIAKEMVRDKDTIFSNR 117 (378)
Q Consensus 59 ~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g~---------~~~v~v~dpe~i~~vl~~~~~~f~~r 117 (378)
++||+..- -....+.++..+||+|..+.+.. .-+|...+++.++.++..++..+.++
T Consensus 31 ~V~nLp~~--~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~Ai~~~~~~~~g~ 96 (116)
T 1x4b_A 31 FIGGLSFE--TTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDGR 96 (116)
T ss_dssp EEECCTTC--CCHHHHHHHHTSSCCCSEEEEECCTTTSSCCSEEEEECSSHHHHHHHHTSCSEEETTE
T ss_pred EEeCCCCC--CCHHHHHHHHHhcCCEEEEEEEECCCCCCcCceEEEEeCCHHHHHHHHHhCCcEECCE
Confidence 55776532 12556788889999987776532 34678889999999997754444443
No 150
>2dh8_A DAZ-associated protein 1; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=35.40 E-value=71 Score=22.30 Aligned_cols=58 Identities=16% Similarity=0.236 Sum_probs=39.6
Q ss_pred cccccccCCCCchHHHHHHHHHHhCCceEEecCC---------ccEEEeCCHHHHHHHHHhCCCccCCC
Q 045796 58 PLVGYLPFLGTDLYKSLTKLADAYGPIYKFWLAN---------KLFVVVSSSSIAKEMVRDKDTIFSNR 117 (378)
Q Consensus 58 p~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g~---------~~~v~v~dpe~i~~vl~~~~~~f~~r 117 (378)
-++||+..- -....+.++..+||+|..+.+.. .-+|-..+++.++.++..++..+.++
T Consensus 19 l~V~nlp~~--~t~~~l~~~F~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~~~a~~a~~~~~~~~~g~ 85 (105)
T 2dh8_A 19 LFVGGLDWS--TTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGR 85 (105)
T ss_dssp ECCBSCCTT--CCHHHHHHHHHTTSCEEEEEEEECSSSCCEEEEEEEEESSTTHHHHHHHHCSEEETTE
T ss_pred EEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEeeCCCCCCcceEEEEEECCHHHHHHHHHhCCCeECCE
Confidence 356777643 12566788889999987776532 23688889999999997754444443
No 151
>2la4_A Nuclear and cytoplasmic polyadenylated RNA-bindin PUB1; RRM, RNA recognition, stress granules, nucleus, RNA-binding, transcription; NMR {Saccharomyces cerevisiae}
Probab=35.17 E-value=90 Score=21.54 Aligned_cols=49 Identities=18% Similarity=0.252 Sum_probs=34.7
Q ss_pred ccccccCCCCchHHHHHHHHHHhCCceEEecC---CccEEEeCCHHHHHHHHHh
Q 045796 59 LVGYLPFLGTDLYKSLTKLADAYGPIYKFWLA---NKLFVVVSSSSIAKEMVRD 109 (378)
Q Consensus 59 ~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g---~~~~v~v~dpe~i~~vl~~ 109 (378)
++||+..- -....+.++..+||+|..+.+. +.-+|...+++.++.++..
T Consensus 31 ~V~nlp~~--~~~~~l~~~f~~~G~i~~~~~~~~~g~afV~f~~~~~A~~Ai~~ 82 (101)
T 2la4_A 31 YIGNIPHF--ATEADLIPLFQNFGFILDFKHYPEKGCCFIKYDTHEQAAVCIVA 82 (101)
T ss_dssp EEESCCTT--CCHHHHHHHHHTTSCCSEEEEETTTTEEEEECSSHHHHHHHHHH
T ss_pred EEcCCCcc--cCHHHHHHHHHhCCCEEEEEEecCCCEEEEEECCHHHHHHHHHH
Confidence 45666532 1256688888999999887763 3346777899999888854
No 152
>2e5j_A Methenyltetrahydrofolate synthetase domain containing; RRM domain, RBD, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=35.06 E-value=1.1e+02 Score=20.97 Aligned_cols=57 Identities=18% Similarity=0.240 Sum_probs=36.4
Q ss_pred ccccccCCCCchHHHHHHHHHHhCCc-eEEecC---CccEEEeCCHHHHHHHHHh-CCCccCCC
Q 045796 59 LVGYLPFLGTDLYKSLTKLADAYGPI-YKFWLA---NKLFVVVSSSSIAKEMVRD-KDTIFSNR 117 (378)
Q Consensus 59 ~lG~~~~l~~~~~~~~~~~~~~yG~i-~~~~~g---~~~~v~v~dpe~i~~vl~~-~~~~f~~r 117 (378)
++||+..- -....+.++..+||+| +++..+ +.-+|-..+++.++.++.. ++..+.++
T Consensus 23 ~V~nL~~~--~t~~~l~~~F~~~G~v~~~~~~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~ 84 (97)
T 2e5j_A 23 YVGNLPRD--ARVSDLKRALRELGSVPLRLTWQGPRRRAFLHYPDSAAAQQAVSCLQGLRLGTD 84 (97)
T ss_dssp EEECCCTT--CCHHHHHHHHHHTTCCCSEEEEETTTTEEEEECSSHHHHHHHHHHHTTCCSSSS
T ss_pred EEeCCCCc--CcHHHHHHHHHhcCCEEEEEEcCCCCcEEEEEECCHHHHHHHHHHhCCCEECCc
Confidence 56776532 1256678888999987 333222 3446888899999998854 44444443
No 153
>1x5p_A Negative elongation factor E; structure genomics, RRM domain, PARP14, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=34.46 E-value=96 Score=21.24 Aligned_cols=55 Identities=18% Similarity=0.102 Sum_probs=38.1
Q ss_pred cccccccCCCCchHHHHHHHHHHhCCceEEecC---CccEEEeCCHHHHHHHHHh-CCCccCC
Q 045796 58 PLVGYLPFLGTDLYKSLTKLADAYGPIYKFWLA---NKLFVVVSSSSIAKEMVRD-KDTIFSN 116 (378)
Q Consensus 58 p~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g---~~~~v~v~dpe~i~~vl~~-~~~~f~~ 116 (378)
-++||+ .+ ....+.++..+||+|..+.++ +.-+|-..+++.++..+.. ++..+.+
T Consensus 18 l~V~n~-~~---t~~~l~~~F~~~G~i~~v~i~~~~g~afV~f~~~~~a~~Ai~~l~g~~~~g 76 (97)
T 1x5p_A 18 LYVYGE-DM---TPTLLRGAFSPFGNIIDLSMDPPRNCAFVTYEKMESADQAVAELNGTQVES 76 (97)
T ss_dssp EEEECS-SC---CHHHHHHHHTTTSCEEEEEEETTTTEEEEEESSHHHHHHHHHHTTTEEETT
T ss_pred EEEcCC-CC---CHHHHHHHHhhCCCEEEEEecCCCCEEEEEECCHHHHHHHHHHhCCCeECC
Confidence 356773 22 256688888999999888765 3346788899999999865 3333433
No 154
>2xnq_A Nuclear polyadenylated RNA-binding protein 3; transcription termination, RNA processi recognition, RRM; HET: CAF; 1.30A {Saccharomyces cerevisiae} PDB: 2xnr_A 2l41_A
Probab=34.27 E-value=1.1e+02 Score=21.13 Aligned_cols=49 Identities=16% Similarity=0.335 Sum_probs=36.0
Q ss_pred ccccccC-CCCchHHHHHHHHHHhCCceEEecC-CccEEEeCCHHHHHHHHHh
Q 045796 59 LVGYLPF-LGTDLYKSLTKLADAYGPIYKFWLA-NKLFVVVSSSSIAKEMVRD 109 (378)
Q Consensus 59 ~lG~~~~-l~~~~~~~~~~~~~~yG~i~~~~~g-~~~~v~v~dpe~i~~vl~~ 109 (378)
++||+.. -. ....+.++..+||+|..+.+. +.-+|-..+++.++.++..
T Consensus 26 ~V~nLp~~~~--t~~~L~~~F~~~G~v~~v~i~~g~afV~f~~~~~A~~Ai~~ 76 (97)
T 2xnq_A 26 FIGNLPLKNV--SKEDLFRIFSPYGHIMQINIKNAFGFIQFDNPQSVRDAIEX 76 (97)
T ss_dssp EEESCCSSCC--CHHHHHHHHGGGSCEEEEEECSSEEEEEESSHHHHHHHHHH
T ss_pred EEeCCCcccC--CHHHHHHHHHhcCCEEEEEEeCCEEEEEECCHHHHHHHHHH
Confidence 5677763 21 145677888999999887753 4457888899999999874
No 155
>1wi8_A EIF-4B, eukaryotic translation initiation factor 4B; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=33.61 E-value=82 Score=21.92 Aligned_cols=58 Identities=12% Similarity=0.137 Sum_probs=38.8
Q ss_pred CcccccccCCCCchHHHHHHHHHHhCCceEEecC----------CccEEEeCCHHHHHHHHHhCCCccCCC
Q 045796 57 LPLVGYLPFLGTDLYKSLTKLADAYGPIYKFWLA----------NKLFVVVSSSSIAKEMVRDKDTIFSNR 117 (378)
Q Consensus 57 ~p~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g----------~~~~v~v~dpe~i~~vl~~~~~~f~~r 117 (378)
.-++||+..-. ....+.++..+|| |..+.+. +.-+|-..+++.++.++..++..+.++
T Consensus 17 ~l~V~nlp~~~--t~~~l~~~F~~~G-i~~v~i~~~~~~~g~~~g~afV~f~~~~~a~~A~~l~g~~~~g~ 84 (104)
T 1wi8_A 17 TAFLGNLPYDV--TEESIKEFFRGLN-ISAVRLPREPSNPERLKGFGYAEFEDLDSLLSALSLNEESLGNK 84 (104)
T ss_dssp EEEEESCCSSC--CHHHHHHHTTTSC-EEEEECCBCSSCTTSBCSCEEEEESSHHHHHHHHGGGTCEETTE
T ss_pred EEEEeCCCCcC--CHHHHHHHHHHCC-ceEEEEecCCCCCCCcCeEEEEEECCHHHHHHHHhcCCCEeCCc
Confidence 34567776431 2556778888999 8888753 123688899999999995454444444
No 156
>2d9p_A Polyadenylate-binding protein 3; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=33.52 E-value=1.2e+02 Score=20.97 Aligned_cols=63 Identities=21% Similarity=0.065 Sum_probs=41.3
Q ss_pred CCCCcccccccCCCCchHHHHHHHHHHhCCceEEecC-------CccEEEeCCHHHHHHHHHh-CCCccCCCC
Q 045796 54 PRGLPLVGYLPFLGTDLYKSLTKLADAYGPIYKFWLA-------NKLFVVVSSSSIAKEMVRD-KDTIFSNRQ 118 (378)
Q Consensus 54 P~~~p~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g-------~~~~v~v~dpe~i~~vl~~-~~~~f~~r~ 118 (378)
+...-++||+..- -....+.++..+||+|..+.+. +.-+|-..+++.++.++.. ++..+.+++
T Consensus 14 ~~~~l~V~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~g~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~ 84 (103)
T 2d9p_A 14 QVVNLYVKNLDDG--IDDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKP 84 (103)
T ss_dssp SCCCEEEECCCTT--CCHHHHHHTTTTTSCEEEEEEEECSSSEEEEEEEEESSHHHHHHHHHHHTTCBSSSSB
T ss_pred CCCEEEEeCCCCC--CCHHHHHHHHHhcCCEEEEEEEcCCCCcCEEEEEEECCHHHHHHHHHHhCCCEeCCcE
Confidence 3334466777643 1245577788899998877654 2336888899999999874 444454443
No 157
>2dhg_A TRNA selenocysteine associated protein (SECP43); RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=33.31 E-value=1.2e+02 Score=20.96 Aligned_cols=64 Identities=16% Similarity=0.069 Sum_probs=41.6
Q ss_pred CCCCCcccccccCCCCchHHHHHHHHHH-hCCceEEecC--------CccEEEeCCHHHHHHHHHh-CCCc-cCCCC
Q 045796 53 GPRGLPLVGYLPFLGTDLYKSLTKLADA-YGPIYKFWLA--------NKLFVVVSSSSIAKEMVRD-KDTI-FSNRQ 118 (378)
Q Consensus 53 gP~~~p~lG~~~~l~~~~~~~~~~~~~~-yG~i~~~~~g--------~~~~v~v~dpe~i~~vl~~-~~~~-f~~r~ 118 (378)
.|...=++||+..-. ....+.++..+ ||+|..+.+. +.-+|-..+++.++.++.. ++.. +.+++
T Consensus 7 ~~~~~l~V~nLp~~~--t~~~l~~~F~~~~G~v~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~l~g~~~~~g~~ 81 (104)
T 2dhg_A 7 GPEYSLFVGDLTPDV--DDGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKP 81 (104)
T ss_dssp SCCCCEEEECCCTTC--CHHHHHHHHHHHCTTEEEEEEEECTTCCEEEEEEEEESCHHHHHHHHHHTTTCCSSSSSC
T ss_pred CCCcEEEEeCCCCCC--CHHHHHHHHHHhCCCeEEEEEEECCCCCccceEEEEECCHHHHHHHHHHccCCcccCCEe
Confidence 343344678876431 24567788888 9998877652 2236888899999999874 3334 44444
No 158
>3ulh_A THO complex subunit 4; nuclear protein, RNA binding, structural genomi center for structural genomics, JCSG, protein structure INI PSI-biology; 2.54A {Homo sapiens} PDB: 1no8_A
Probab=33.26 E-value=83 Score=21.99 Aligned_cols=56 Identities=16% Similarity=0.115 Sum_probs=37.5
Q ss_pred cccccccCCCCchHHHHHHHHHHhCCceEEecC--------CccEEEeCCHHHHHHHHHh-CCCccC
Q 045796 58 PLVGYLPFLGTDLYKSLTKLADAYGPIYKFWLA--------NKLFVVVSSSSIAKEMVRD-KDTIFS 115 (378)
Q Consensus 58 p~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g--------~~~~v~v~dpe~i~~vl~~-~~~~f~ 115 (378)
=++||+..- -....+.++..+||+|..+.+. +.-+|-..+++.++.++.. ++..+.
T Consensus 32 l~V~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~l~g~~~~ 96 (107)
T 3ulh_A 32 LLVSNLDFG--VSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLD 96 (107)
T ss_dssp EEEESCCTT--CCHHHHHHHHHTTSCEEEEEEEECTTSCEEEEEEEEESSHHHHHHHHHHHTTCEET
T ss_pred EEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEECCCCCcceEEEEEECCHHHHHHHHHHhCCCEeC
Confidence 356776542 1245678888999998777643 1236788899999999874 443333
No 159
>1x4e_A RNA binding motif, single-stranded interacting protein 2; structural genomics, RRM domain, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=32.87 E-value=58 Score=21.65 Aligned_cols=51 Identities=25% Similarity=0.112 Sum_probs=34.7
Q ss_pred CcccccccCCCCchHHHHHHHHHHhCCceEEecCC---------ccEEEeCCHHHHHHHHHh
Q 045796 57 LPLVGYLPFLGTDLYKSLTKLADAYGPIYKFWLAN---------KLFVVVSSSSIAKEMVRD 109 (378)
Q Consensus 57 ~p~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g~---------~~~v~v~dpe~i~~vl~~ 109 (378)
.=++||+..- -....+.++..+||+|..+.+.. .-+|-..+++.++.++..
T Consensus 7 ~l~v~nlp~~--~t~~~l~~~f~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 66 (85)
T 1x4e_A 7 GLYIRGLQPG--TTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTA 66 (85)
T ss_dssp EEEEESCCTT--CCHHHHHTTSTTTSCEEEEEEECCSSSCSCCSEEEEEESCHHHHHHHHHH
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEecCCCCCcCcEEEEEECCHHHHHHHHHH
Confidence 3356776542 12455777778999988876422 246788899999988863
No 160
>2e5h_A Zinc finger CCHC-type and RNA-binding motif- containing protein 1; RRM domain, RBD, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=32.83 E-value=1.1e+02 Score=20.55 Aligned_cols=51 Identities=22% Similarity=0.321 Sum_probs=36.5
Q ss_pred CcccccccCCCCchHHHHHHHHHHhCCceEEecCC---------ccEEEeCCHHHHHHHHHh
Q 045796 57 LPLVGYLPFLGTDLYKSLTKLADAYGPIYKFWLAN---------KLFVVVSSSSIAKEMVRD 109 (378)
Q Consensus 57 ~p~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g~---------~~~v~v~dpe~i~~vl~~ 109 (378)
.=++||+..- -....+.++..+||+|..+.+.. .-+|-..+++.++.++..
T Consensus 18 ~l~V~nlp~~--~t~~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 77 (94)
T 2e5h_A 18 TVYVSNLPFS--LTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSAQNCTRA 77 (94)
T ss_dssp SEEEESCCTT--SCHHHHHHHTTTTSCEEEEEECCCSSSCCCTTCEEEEESCHHHHHHHHHH
T ss_pred EEEEECCCCC--CCHHHHHHHHHhcCCeEEEEEEeCCCCCCcccEEEEEECCHHHHHHHHHH
Confidence 4456777642 12556788889999998877632 347888999999999864
No 161
>3ue2_A Poly(U)-binding-splicing factor PUF60; RNA recognition motif, RRM, RNA binding domain, ST genomics, joint center for structural genomics, JCSG; HET: MSE; 1.23A {Homo sapiens} SCOP: d.58.7.0 PDB: 3us5_A 2dny_A
Probab=32.83 E-value=63 Score=23.71 Aligned_cols=64 Identities=17% Similarity=0.262 Sum_probs=41.5
Q ss_pred CCCcccccccCC---CCchHHHHHHHHHHhCCceEEecC-------------CccEEEeCCHHHHHHHHHh-CCCccCCC
Q 045796 55 RGLPLVGYLPFL---GTDLYKSLTKLADAYGPIYKFWLA-------------NKLFVVVSSSSIAKEMVRD-KDTIFSNR 117 (378)
Q Consensus 55 ~~~p~lG~~~~l---~~~~~~~~~~~~~~yG~i~~~~~g-------------~~~~v~v~dpe~i~~vl~~-~~~~f~~r 117 (378)
...=+|.|+..- .......+.+...+||+|..+++. |.-+|-..+++.++..+.. ++..|.+|
T Consensus 20 s~vl~L~Nm~~~~el~ddleedl~eef~k~G~V~~v~I~~~~~~~~~~~~~~G~~FV~F~~~e~A~~Ai~~LnGr~f~GR 99 (118)
T 3ue2_A 20 STVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSIASETHKAIQALNGRWFAGR 99 (118)
T ss_dssp CCEEEEESCSCGGGCCTTHHHHHHHHHTTTSCEEEEEEEEEEESSSTTCEEEEEEEEEESSHHHHHHHHHHHTTCEETTE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHHHHHhccCCEeEEEEeecCCCcccCCcceEEEEEEECCHHHHHHHHHHHCCCEECCc
Confidence 334566777543 334567788888899998877642 1235667799988887754 44456555
Q ss_pred C
Q 045796 118 Q 118 (378)
Q Consensus 118 ~ 118 (378)
+
T Consensus 100 ~ 100 (118)
T 3ue2_A 100 K 100 (118)
T ss_dssp E
T ss_pred E
Confidence 4
No 162
>2cpd_A Apobec-1 stimulating protein; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=32.42 E-value=1e+02 Score=21.11 Aligned_cols=57 Identities=16% Similarity=0.110 Sum_probs=39.0
Q ss_pred cccccccCCCCchHHHHHHHHHHh--CCceEEecC-CccEEEeCCHHHHHHHHH-hCCCccCC
Q 045796 58 PLVGYLPFLGTDLYKSLTKLADAY--GPIYKFWLA-NKLFVVVSSSSIAKEMVR-DKDTIFSN 116 (378)
Q Consensus 58 p~lG~~~~l~~~~~~~~~~~~~~y--G~i~~~~~g-~~~~v~v~dpe~i~~vl~-~~~~~f~~ 116 (378)
-++||+..- -....+.++..+| |.|..+.+. +.-+|-..+++.++.++. -++..+.+
T Consensus 18 l~V~nLp~~--~t~~~l~~~F~~~g~g~v~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g 78 (99)
T 2cpd_A 18 LYVRNLMLS--TSEEMIEKEFNNIKPGAVERVKKIRDYAFVHFSNREDAVEAMKALNGKVLDG 78 (99)
T ss_dssp EEEESCCTT--CCHHHHHHHHHTTSTTCEEEEEECSSEEEEEESSHHHHHHHHHHHSSEEETT
T ss_pred EEEeCCCCC--CCHHHHHHHHHhcCCcceEEEEEeCCeEEEEeCCHHHHHHHHHHhCCCEeCC
Confidence 356777642 1256688888999 888887753 345788889999999987 34434443
No 163
>2voo_A Lupus LA protein; RNA-binding protein, RNA recognition motif, systemic lupus erythematosus, phosphoprotein, RNA maturation; 1.8A {Homo sapiens} SCOP: a.4.5.46 d.58.7.1 PDB: 2von_A 2vod_A 2vop_A 1zh5_A 1yty_A 1s7a_A
Probab=32.36 E-value=53 Score=26.46 Aligned_cols=57 Identities=16% Similarity=0.271 Sum_probs=38.8
Q ss_pred ccccccCCCCchHHHHHHHHHHhCCceEEecC--------CccEEEeCCHHHHHHHHHhCCCccCCC
Q 045796 59 LVGYLPFLGTDLYKSLTKLADAYGPIYKFWLA--------NKLFVVVSSSSIAKEMVRDKDTIFSNR 117 (378)
Q Consensus 59 ~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g--------~~~~v~v~dpe~i~~vl~~~~~~f~~r 117 (378)
++||+..- .....+.++..+||+|..+++. |.-+|-..+++.++.++...+..+.++
T Consensus 113 ~V~nLp~~--~t~~~L~~~F~~~G~v~~v~i~~~~~~~~kG~aFVeF~~~e~A~~A~~~~~~~~~Gr 177 (193)
T 2voo_A 113 YIKGFPTD--ATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFVETPGQKYKET 177 (193)
T ss_dssp EEECCCTT--CCHHHHHHHHTTSCCEEEEEEEECTTCCEEEEEEEEESSHHHHHHHHHCTTCEETTE
T ss_pred EecCCCCc--CCHHHHHHHHhcCCCEEEEEEEECCCCCcccEEEEEECCHHHHHHHHHhCCCeECCE
Confidence 45665532 2367788889999998777542 334688889999999997654444443
No 164
>2cpz_A CUG triplet repeat RNA-binding protein 1; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 2rq4_A 2rqc_A
Probab=32.35 E-value=1.1e+02 Score=21.82 Aligned_cols=58 Identities=12% Similarity=0.034 Sum_probs=38.6
Q ss_pred cccccccCCCCchHHHHHHHHHHhCCceEEecCC---------ccEEEeCCHHHHHHHHHh-CCCccCCC
Q 045796 58 PLVGYLPFLGTDLYKSLTKLADAYGPIYKFWLAN---------KLFVVVSSSSIAKEMVRD-KDTIFSNR 117 (378)
Q Consensus 58 p~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g~---------~~~v~v~dpe~i~~vl~~-~~~~f~~r 117 (378)
=++||+..- -....+.++..+||+|..+.+.. .-+|-..+++.++.++.. ++..+.++
T Consensus 28 l~V~nLp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~ 95 (115)
T 2cpz_A 28 LFIYHLPQE--FGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMK 95 (115)
T ss_dssp EEEESCCSS--CCHHHHHHHHGGGSCCSEEEEEECSSSCSEEEEEEEECSSHHHHHHHHHHHTTCEETTE
T ss_pred EEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEECCCCCCcCccEEEEECCHHHHHHHHHHcCCCEECCE
Confidence 356777643 12566888889999987776532 236788899999999854 44344433
No 165
>2kt5_A RNA and export factor-binding protein 2; chaperone, mRNA processing, mRNA splicing, transport, nucleus, RNA-binding, spliceosome, transport; NMR {Mus musculus}
Probab=31.54 E-value=1.2e+02 Score=21.95 Aligned_cols=57 Identities=19% Similarity=0.172 Sum_probs=38.1
Q ss_pred ccccccCCCCchHHHHHHHHHHhCCceEEecC--------CccEEEeCCHHHHHHHHHh-CCCccCCC
Q 045796 59 LVGYLPFLGTDLYKSLTKLADAYGPIYKFWLA--------NKLFVVVSSSSIAKEMVRD-KDTIFSNR 117 (378)
Q Consensus 59 ~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g--------~~~~v~v~dpe~i~~vl~~-~~~~f~~r 117 (378)
++||+..- -....+.++..+||+|..+.+. +.-+|-..+++.++.++.. ++..+.++
T Consensus 39 ~V~nlp~~--~t~~~l~~~F~~~G~v~~v~i~~~~~g~~~g~afV~f~~~~~A~~Ai~~l~g~~~~g~ 104 (124)
T 2kt5_A 39 LVSNLDFG--VSDADIQELFAEFGTLKKAAVDYDRSGRSLGTADVHFERRADALKAMKQYKGVPLDGR 104 (124)
T ss_dssp EEESCCSS--CCHHHHHHHHHTTSCCSEEEEECCSSSSCCSEEEEEESSHHHHHHHHHHHTTEESSSC
T ss_pred EEeCCCCC--CCHHHHHHHHHhcCCeeEEEEEECCCCCEeeEEEEEECCHHHHHHHHHHcCCCEECCc
Confidence 45666532 1255678888999998877752 2346888899999999873 44344443
No 166
>2dit_A HIV TAT specific factor 1 variant; structural genomics, RRM_1 domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=31.51 E-value=80 Score=22.53 Aligned_cols=68 Identities=16% Similarity=0.153 Sum_probs=42.8
Q ss_pred CCCCCCCcccccccCCCC---c------hHHHHHHHHHHhCCceEEecC-----CccEEEeCCHHHHHHHHHh-CCCccC
Q 045796 51 PPGPRGLPLVGYLPFLGT---D------LYKSLTKLADAYGPIYKFWLA-----NKLFVVVSSSSIAKEMVRD-KDTIFS 115 (378)
Q Consensus 51 ~PgP~~~p~lG~~~~l~~---~------~~~~~~~~~~~yG~i~~~~~g-----~~~~v~v~dpe~i~~vl~~-~~~~f~ 115 (378)
-|.|...-++.|+..-.. . ....+.+...+||+|..+.+. |.-+|...+++.++..+.. ++..+.
T Consensus 11 ~~~~s~~l~l~Nl~~~~~~~~~~~~~~~~e~~l~~~f~~~G~v~~v~i~~~~~~G~afV~f~~~~~A~~Ai~~lng~~~~ 90 (112)
T 2dit_A 11 RMRHERVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLFDRHPDGVASVSFRDPEEADYCIQTLDGRWFG 90 (112)
T ss_dssp CCCSCCEEEEESSCCTTHHHHCSHHHHHHHHHHHHHGGGTSCCSEEEEETTCTTCEEEEECSCHHHHHHHHHHSTTCEET
T ss_pred CCCCceEEEEEcCCCHHHhccCHHHHHHHHHHHHHHHHccCCEeEEEEecCCCCEEEEEEECCHHHHHHHHHHcCCCEEC
Confidence 344555566777754321 1 235677788899998877652 3346778899999988854 333444
Q ss_pred CCC
Q 045796 116 NRQ 118 (378)
Q Consensus 116 ~r~ 118 (378)
+|+
T Consensus 91 gr~ 93 (112)
T 2dit_A 91 GRQ 93 (112)
T ss_dssp TEE
T ss_pred CcE
Confidence 443
No 167
>1whv_A Poly(A)-specific ribonuclease; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, PARN, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1 PDB: 2rok_A*
Probab=31.27 E-value=64 Score=22.99 Aligned_cols=38 Identities=26% Similarity=0.406 Sum_probs=29.4
Q ss_pred HHHHHHHHHHhCCceEEecCCcc-EEEeCCHHHHHHHHH
Q 045796 71 YKSLTKLADAYGPIYKFWLANKL-FVVVSSSSIAKEMVR 108 (378)
Q Consensus 71 ~~~~~~~~~~yG~i~~~~~g~~~-~v~v~dpe~i~~vl~ 108 (378)
...+.++...||.|.--|+-..- .|++++|+.+++++.
T Consensus 29 t~DI~~lFs~fggv~I~WidDTsAlvvf~~~~~a~~al~ 67 (100)
T 1whv_A 29 TSDLYQLFSAFGNIQISWIDDTSAFVSLSQPEQVQIAVN 67 (100)
T ss_dssp HHHHHHHHTTTCSCCCEEEETTEEEEECSCHHHHHHHHH
T ss_pred hHHHHHHhhccCCEEEEEEcCCeEEEEecCHHHHHHHHH
Confidence 56688888999976544555443 688899999999997
No 168
>1h2v_Z 20 kDa nuclear CAP binding protein; CAP-binding-complex, RNP domain, MIF4G domain, RNA maturation, RNA export, nuclear protein, RNA-binding; 2.0A {Homo sapiens} SCOP: d.58.7.1 PDB: 1h2u_X* 1h2t_Z 1n52_B* 1n54_B 3fex_B 3fey_B 1h6k_X
Probab=30.29 E-value=79 Score=24.09 Aligned_cols=58 Identities=26% Similarity=0.281 Sum_probs=39.6
Q ss_pred cccccccCCCCchHHHHHHHHHHhCCceEEecC---------CccEEEeCCHHHHHHHHHh-CCCccCCC
Q 045796 58 PLVGYLPFLGTDLYKSLTKLADAYGPIYKFWLA---------NKLFVVVSSSSIAKEMVRD-KDTIFSNR 117 (378)
Q Consensus 58 p~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g---------~~~~v~v~dpe~i~~vl~~-~~~~f~~r 117 (378)
-++||+..- -....+.++..+||+|..+.+. +.-+|...+++.++.++.. ++..+.++
T Consensus 42 l~V~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~Ai~~l~g~~~~g~ 109 (156)
T 1h2v_Z 42 LYVGNLSFY--TTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRYINGTRLDDR 109 (156)
T ss_dssp EEEESCCTT--CCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHTTTSEETTE
T ss_pred EEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEecCCCCccceEEEEEECCHHHHHHHHHHhCCCEECCe
Confidence 356777642 1256688888999999888762 1237888899999999975 44444443
No 169
>1rk8_A CG8781-PA, CG8781-PA protein; mRNA processing, RRM, RBD, NMD, oskar mRNA localization, translation; 1.90A {Drosophila melanogaster} SCOP: d.58.7.1 PDB: 1hl6_A 2x1g_A
Probab=29.87 E-value=99 Score=23.87 Aligned_cols=57 Identities=12% Similarity=0.047 Sum_probs=38.6
Q ss_pred ccccccCCCCchHHHHHHHHHHhCCceEEecC---------CccEEEeCCHHHHHHHHHh-CCCccCCC
Q 045796 59 LVGYLPFLGTDLYKSLTKLADAYGPIYKFWLA---------NKLFVVVSSSSIAKEMVRD-KDTIFSNR 117 (378)
Q Consensus 59 ~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g---------~~~~v~v~dpe~i~~vl~~-~~~~f~~r 117 (378)
++||+..- -....+.++..+||+|..+.+. +.-+|-..+++.++.++.. ++..+.++
T Consensus 76 ~V~nLp~~--~t~~~L~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~Ai~~l~g~~~~g~ 142 (165)
T 1rk8_A 76 FVTSIHEE--AQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEALNGAEIMGQ 142 (165)
T ss_dssp EEESCCTT--CCHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESSHHHHHHHHHHHTTCEETTE
T ss_pred EEeCCCCC--CCHHHHHHHhhcCCCEEEEEEEecCCCCcEeeEEEEEECCHHHHHHHHHHhCCCEECCE
Confidence 56776642 2256688888999998777653 2346888899999999864 44344433
No 170
>3n9u_C Cleavage and polyadenylation specificity factor S; protein-protein complex, coexpression, heterotetramer, mRNA maturation, mRNA cleavage; 1.92A {Homo sapiens}
Probab=29.62 E-value=98 Score=23.84 Aligned_cols=45 Identities=16% Similarity=0.234 Sum_probs=32.8
Q ss_pred HHHHHHHHHHhC--CceEEecC-----C----ccEEEeCCHHHHHHHHHh-CCCccC
Q 045796 71 YKSLTKLADAYG--PIYKFWLA-----N----KLFVVVSSSSIAKEMVRD-KDTIFS 115 (378)
Q Consensus 71 ~~~~~~~~~~yG--~i~~~~~g-----~----~~~v~v~dpe~i~~vl~~-~~~~f~ 115 (378)
...+.++..+|| +|..+++. + .=+|-..+++.++.++.. ++..+.
T Consensus 69 e~~L~~~F~~~G~i~v~~v~i~~d~~tg~skGfaFV~f~~~~~A~~Ai~~lng~~~~ 125 (156)
T 3n9u_C 69 DQQLIQVIRSIGVYDVVELKFAENRANGQSKGYAEVVVASENSVHKLLELLPGKVLN 125 (156)
T ss_dssp HHHHHHHHHHTTCCCEEEEEEEECTTTCCEEEEEEEEESCHHHHHHHHHHSTTCEET
T ss_pred HHHHHHHHHHHCCccEEEEEEEecCCCCccceEEEEEECCHHHHHHHHHHcCCCEEC
Confidence 566888889999 88777652 1 237888999999999876 433343
No 171
>1x4d_A Matrin 3; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=29.45 E-value=92 Score=22.08 Aligned_cols=56 Identities=18% Similarity=0.223 Sum_probs=39.3
Q ss_pred CCCCCcccccccCCCCchHHHHHHHHHHhCCceEEecCC---ccEEEeCCHHHHHHHHHh
Q 045796 53 GPRGLPLVGYLPFLGTDLYKSLTKLADAYGPIYKFWLAN---KLFVVVSSSSIAKEMVRD 109 (378)
Q Consensus 53 gP~~~p~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g~---~~~v~v~dpe~i~~vl~~ 109 (378)
.|...=++||+..- .-....+.++..+||+|..+++.. .-+|-..+++.++.++..
T Consensus 13 ~p~~~l~V~nLp~~-~~te~dL~~lF~~fG~V~~v~i~~~kg~aFVef~~~~~A~~Ai~~ 71 (102)
T 1x4d_A 13 ETRRVVHIMDFQRG-KNLRYQLLQLVEPFGVISNHLILNKINEAFIEMATTEDAQAAVDY 71 (102)
T ss_dssp CCCCEEEEESCCCS-SSHHHHHHTTTGGGSCEEEEEECSSSSCEEEEESSHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCC-cCCHHHHHHHHHhcCCEEEEEEEcCCCEEEEEECCHHHHHHHHHH
Confidence 34444567888751 122456888889999998888642 347888999999988763
No 172
>1x5s_A Cold-inducible RNA-binding protein; structure genomics, RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=29.43 E-value=1.4e+02 Score=20.50 Aligned_cols=60 Identities=25% Similarity=0.253 Sum_probs=40.2
Q ss_pred CcccccccCCCCchHHHHHHHHHHhCCceEEecCC---------ccEEEeCCHHHHHHHHHh-CCCccCCCC
Q 045796 57 LPLVGYLPFLGTDLYKSLTKLADAYGPIYKFWLAN---------KLFVVVSSSSIAKEMVRD-KDTIFSNRQ 118 (378)
Q Consensus 57 ~p~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g~---------~~~v~v~dpe~i~~vl~~-~~~~f~~r~ 118 (378)
.-++||+..- -....+.++..+||+|..+.+.. .-+|-..+++.++.++.. ++..+.+++
T Consensus 14 ~l~v~nLp~~--~t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~ 83 (102)
T 1x5s_A 14 KLFVGGLSFD--TNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQ 83 (102)
T ss_dssp EEEEESCCTT--CCHHHHHHHHHHHSCCCEEEECCCSSSCSCCSEEEEECSSHHHHHHHHHHHTTCCTTSCC
T ss_pred EEEEECCCCC--CCHHHHHHHHHhcCCeEEEEEEeCCCCCCcccEEEEEECCHHHHHHHHHHhCCCEECCeE
Confidence 3456777642 12556788889999998877633 236778899999999854 444454444
No 173
>1ufw_A Synaptojanin 2; RNP domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=29.25 E-value=96 Score=21.91 Aligned_cols=48 Identities=19% Similarity=0.268 Sum_probs=33.8
Q ss_pred hHHHHHHHHHHhCCceEEec-CCccEEEeCCHHHHHHHHHhCCCccCCC
Q 045796 70 LYKSLTKLADAYGPIYKFWL-ANKLFVVVSSSSIAKEMVRDKDTIFSNR 117 (378)
Q Consensus 70 ~~~~~~~~~~~yG~i~~~~~-g~~~~v~v~dpe~i~~vl~~~~~~f~~r 117 (378)
+...+.+...+||.|.-+++ .++=+|...|.+.+..++.-++..+.+|
T Consensus 37 l~~~L~~~F~~~G~Vilvr~v~d~~fVtF~d~~sAl~AI~ldG~~v~Gr 85 (95)
T 1ufw_A 37 LRTELMQTLGSYGTIVLVRINQGQMLVTFADSHSALSVLDVDGMKVKGR 85 (95)
T ss_dssp HHHHHHHHHHHHSCCSEEEEETTEEEEECSCSHHHHHHHHGGGSEETTE
T ss_pred HHHHHHHHHHHCCCEEEEEEecCcEEEEEcChHHHHHHHhcCCeeeCCe
Confidence 34456666778999877774 5556788889999988887555444443
No 174
>2cpj_A Non-POU domain-containing octamer-binding protein; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=29.23 E-value=1.1e+02 Score=20.89 Aligned_cols=59 Identities=19% Similarity=0.262 Sum_probs=39.4
Q ss_pred cccccccCCCCchHHHHHHHHHHhCCceEEecC---CccEEEeCCHHHHHHHHHh-CCCccCCCC
Q 045796 58 PLVGYLPFLGTDLYKSLTKLADAYGPIYKFWLA---NKLFVVVSSSSIAKEMVRD-KDTIFSNRQ 118 (378)
Q Consensus 58 p~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g---~~~~v~v~dpe~i~~vl~~-~~~~f~~r~ 118 (378)
=++||+..- -....+.++..+||+|..+.+. +.-+|-..+++.++.++.. ++..+.+++
T Consensus 18 l~V~nlp~~--~t~~~l~~~F~~~G~i~~v~~~~~kg~afV~f~~~~~a~~a~~~l~g~~~~g~~ 80 (99)
T 2cpj_A 18 LFVGNLPPD--ITEEEMRKLFEKYGKAGEVFIHKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQ 80 (99)
T ss_dssp EEEESCCTT--CCHHHHHHHTSTTCCCSEEEEETTTTEEEEECSSSHHHHHHHHHHTTCCBTTBC
T ss_pred EEEeCCCCC--CCHHHHHHHHhhcCCeEEEEEecCCCEEEEEECCHHHHHHHHHHhCCCEeCCce
Confidence 356777642 1255678888999998887754 3346777899999988854 444454443
No 175
>1u6f_A Tcubp1, RNA-binding protein UBP1; trypanosome, mRNA-binding protein, GU-rich RNA, structure; NMR {Trypanosoma cruzi} SCOP: d.58.7.1
Probab=28.85 E-value=1.3e+02 Score=22.17 Aligned_cols=57 Identities=26% Similarity=0.334 Sum_probs=37.7
Q ss_pred ccccccCCCCchHHHHHHHHHHhCCceEEecC---------CccEEEeCCHHHHHHHHHh-CCCccCCC
Q 045796 59 LVGYLPFLGTDLYKSLTKLADAYGPIYKFWLA---------NKLFVVVSSSSIAKEMVRD-KDTIFSNR 117 (378)
Q Consensus 59 ~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g---------~~~~v~v~dpe~i~~vl~~-~~~~f~~r 117 (378)
++||+..- -....+.++..+||+|..+.+. +.-+|-..+++.++.++.. ++..+.++
T Consensus 46 ~V~nLp~~--~~~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~ 112 (139)
T 1u6f_A 46 MVNYIPTT--VDEVQLRQLFERYGPIESVKIVCDRETRQSRGYGFVKFQSGSSAQQAIAGLNGFNILNK 112 (139)
T ss_dssp EEESCSTT--CCHHHHHHHHHHHSCEEEEEEEEETTTTEEEEEEEEEESSHHHHHHHHHHTTTEECSSC
T ss_pred EEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEEcCCCCCcceEEEEEECCHHHHHHHHHHhCCCEECCe
Confidence 45666532 1255688888999998777652 1236888899999999874 44344433
No 176
>2cpi_A CCR4-NOT transcription complex subunit 4; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=28.81 E-value=28 Score=25.06 Aligned_cols=59 Identities=17% Similarity=0.137 Sum_probs=38.5
Q ss_pred CcccccccCCCCchHHHHH---HHHHHhCCceEEecC------------CccEEEeCCHHHHHHHHHh-CCCccCCC
Q 045796 57 LPLVGYLPFLGTDLYKSLT---KLADAYGPIYKFWLA------------NKLFVVVSSSSIAKEMVRD-KDTIFSNR 117 (378)
Q Consensus 57 ~p~lG~~~~l~~~~~~~~~---~~~~~yG~i~~~~~g------------~~~~v~v~dpe~i~~vl~~-~~~~f~~r 117 (378)
.=++||+..-.. ...+. ++..+||+|..+.+. +.-+|-..+++.++..+.. ++..+.++
T Consensus 17 ~l~V~nLp~~~~--~~~l~~~~~~F~~~G~i~~v~i~~~~~~~~~~~~~G~afV~f~~~~~A~~Ai~~lng~~~~gr 91 (111)
T 2cpi_A 17 LVFVVGLSQRLA--DPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVVVDGR 91 (111)
T ss_dssp CEEEEEECTTTC--CHHHHHSTTTTTTTSCEEEEEEECCSSCCSSSCCCEEEEEEESSHHHHHHHHHHHTTEEETTE
T ss_pred EEEEECCCCCCC--HHHHHHHHHHhhccCCEEEEEEecCCCcCccCCCCeEEEEEECcHHHHHHHHHHhCCCEECCE
Confidence 345677764311 23355 777899998877653 2346788899999999875 55445444
No 177
>2bz2_A Negative elongation factor E; NELF E, RNA recognition motif, alternative splicing, nuclear protein, phosphorylation, repeat, repressor; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 2jx2_A
Probab=28.80 E-value=73 Score=23.28 Aligned_cols=56 Identities=18% Similarity=0.088 Sum_probs=38.3
Q ss_pred cccccccCCCCchHHHHHHHHHHhCCceEEecC---CccEEEeCCHHHHHHHHHh-CCCccCCC
Q 045796 58 PLVGYLPFLGTDLYKSLTKLADAYGPIYKFWLA---NKLFVVVSSSSIAKEMVRD-KDTIFSNR 117 (378)
Q Consensus 58 p~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g---~~~~v~v~dpe~i~~vl~~-~~~~f~~r 117 (378)
-++||+ .+ ....+.++..+||+|..+.++ +.-+|...+++.++..+.. ++..+.++
T Consensus 42 lfVgnl-~~---te~~L~~~F~~~G~I~~v~i~~~kg~aFV~f~~~~~A~~Ai~~lng~~~~g~ 101 (121)
T 2bz2_A 42 LYVYGE-DM---TPTLLRGAFSPFGNIIDLSMDPPRNCAFVTYEKMESADQAVAELNGTQVESV 101 (121)
T ss_dssp EEEECS-SC---CHHHHHHHHSTTCCCSCEEEETTTTEEEEECSSHHHHHHHHHHHTTCBCSSC
T ss_pred EEEcCC-CC---CHHHHHHHHHccCCEEEEEEeCCCCEEEEEECCHHHHHHHHHHhCCCEECCe
Confidence 356773 22 256688888999998877764 3446788899999998854 44444443
No 178
>1x4h_A RNA-binding protein 28; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=28.57 E-value=1.5e+02 Score=20.66 Aligned_cols=52 Identities=12% Similarity=0.169 Sum_probs=37.1
Q ss_pred CcccccccCCCCchHHHHHHHHHHhCCceEEecC---------CccEEEeCCHHHHHHHHHhC
Q 045796 57 LPLVGYLPFLGTDLYKSLTKLADAYGPIYKFWLA---------NKLFVVVSSSSIAKEMVRDK 110 (378)
Q Consensus 57 ~p~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g---------~~~~v~v~dpe~i~~vl~~~ 110 (378)
.-++||+..-. ....+.++..+||+|..+.+. +.-+|-..+++.++.++..-
T Consensus 17 ~l~V~nLp~~~--t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~A~~~~ 77 (111)
T 1x4h_A 17 TVFIRNLSFDS--EEEALGEVLQQFGDLKYVRVVLHPDTEHSKGCAFAQFMTQEAAQKCLAAA 77 (111)
T ss_dssp CEEEESCCTTC--CHHHHHHHHHTTSCEEEEECCBCSSSCCBCSEEEEEESSHHHHHHHHHHH
T ss_pred EEEEECCCCCC--CHHHHHHHHHhcCCeEEEEEEecCCCCCCccEEEEEECCHHHHHHHHHHh
Confidence 44678776431 255678888999999888764 12367888999999998653
No 179
>2cq0_A Eukaryotic translation initiation factor 3 subunit 4; RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=28.55 E-value=44 Score=23.38 Aligned_cols=50 Identities=20% Similarity=0.196 Sum_probs=35.3
Q ss_pred cccccccCCCCchHHHHHHHHHHhCCceEEecCC---------ccEEEeCCHHHHHHHHHh
Q 045796 58 PLVGYLPFLGTDLYKSLTKLADAYGPIYKFWLAN---------KLFVVVSSSSIAKEMVRD 109 (378)
Q Consensus 58 p~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g~---------~~~v~v~dpe~i~~vl~~ 109 (378)
=++||+..- -....+.++..+||+|..+.+.. .-+|-..+++.++.++..
T Consensus 18 l~V~nlp~~--~t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 76 (103)
T 2cq0_A 18 IRVTNLSED--TRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAG 76 (103)
T ss_dssp EEEESCCTT--CCHHHHHTTSTTTCCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCCC--CCHHHHHHHHHhCCCeEEEEEeecCCCCceeeEEEEEECCHHHHHHHHHH
Confidence 356777643 12455777788999988877532 236888899999999874
No 180
>2e5g_A U6 snRNA-specific terminal uridylyltransferase 1; RRM domain, RBD, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=28.51 E-value=1.1e+02 Score=20.71 Aligned_cols=57 Identities=12% Similarity=0.147 Sum_probs=37.7
Q ss_pred ccccccCCCCchHHHHHHHHHHhCCceEEecCC----ccEEEeCCHHHHHHHHHhCCCccCCC
Q 045796 59 LVGYLPFLGTDLYKSLTKLADAYGPIYKFWLAN----KLFVVVSSSSIAKEMVRDKDTIFSNR 117 (378)
Q Consensus 59 ~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g~----~~~v~v~dpe~i~~vl~~~~~~f~~r 117 (378)
++||+..- -....+.++..+||+|..+..-. .-+|-..+++.++.++.-++..+.++
T Consensus 12 ~V~nl~~~--~t~~~l~~~F~~~G~v~~v~~~~~~g~~afV~f~~~~~a~~ai~l~g~~~~g~ 72 (94)
T 2e5g_A 12 FVSGFPRG--VDSAQLSEYFLAFGPVASVVMDKDKGVFAIVEMGDVGAREAVLSQSQHSLGGH 72 (94)
T ss_dssp EEECCCTT--CCHHHHHHHGGGTSCEEEEEECSSSCCEEEEEESSHHHHHHHHTCSCCEETTE
T ss_pred EEECCCCC--CCHHHHHHHHHhcCCeEEEEEcCCCCcEEEEEECCHHHHHHHHhcCCeEECCE
Confidence 45776542 12566788889999987763211 23577789999999998544445444
No 181
>1jmt_A Splicing factor U2AF 35 kDa subunit; RRM, RNA splicing, proline, PPII helix, peptide recognition, RNA binding protein; 2.20A {Homo sapiens} SCOP: d.58.7.3
Probab=28.45 E-value=1e+02 Score=21.81 Aligned_cols=46 Identities=15% Similarity=0.312 Sum_probs=30.5
Q ss_pred HHHHHH-HHhCCceEEecCC--------ccEEEeCCHHHHHHHHHh-CCCccCCCC
Q 045796 73 SLTKLA-DAYGPIYKFWLAN--------KLFVVVSSSSIAKEMVRD-KDTIFSNRQ 118 (378)
Q Consensus 73 ~~~~~~-~~yG~i~~~~~g~--------~~~v~v~dpe~i~~vl~~-~~~~f~~r~ 118 (378)
.+.+.. .+||+|..+.+.. .-+|-..+++.++..+.. ++..|.+|+
T Consensus 42 dl~~~f~~~~G~V~~v~i~~~~~~~~~G~~fV~f~~~~~A~~A~~~lng~~~~Gr~ 97 (104)
T 1jmt_A 42 EVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQP 97 (104)
T ss_dssp HHHHHHHHHTCCEEEEEECCSSSSSSEEEEEEEESCHHHHHHHHHHHTTCEETTEE
T ss_pred HHHHHhhccCCceEEEEEEeCCCCCccEEEEEEECCHHHHHHHHHHHCCCEECCEE
Confidence 344555 8999998887642 235777899999888754 444455443
No 182
>2err_A Ataxin-2-binding protein 1; protein-RNA complex, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=28.17 E-value=78 Score=22.44 Aligned_cols=56 Identities=20% Similarity=0.225 Sum_probs=37.1
Q ss_pred ccccccCCCCchHHHHHHHHHHhCCceEEecC-------CccEEEeCCHHHHHHHHHh-CCCccCC
Q 045796 59 LVGYLPFLGTDLYKSLTKLADAYGPIYKFWLA-------NKLFVVVSSSSIAKEMVRD-KDTIFSN 116 (378)
Q Consensus 59 ~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g-------~~~~v~v~dpe~i~~vl~~-~~~~f~~ 116 (378)
++||+..- -....+.++..+||+|..+.+. +.-+|-..+++.++.++.. ++..+.+
T Consensus 33 ~V~nLp~~--~te~~l~~~F~~~G~i~~v~i~~~~~~~kg~afV~f~~~~~A~~Ai~~l~g~~~~g 96 (109)
T 2err_A 33 HVSNIPFR--FRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEG 96 (109)
T ss_dssp EEESCCTT--CCHHHHHHHGGGTCCCSCEEECCBTTBCTTEEEEECCCSHHHHHHHHHHTTCEETT
T ss_pred EEECCCCc--CCHHHHHHHHHhcCCEEEEEEEECCCCCceEEEEEECCHHHHHHHHHHcCCCEECC
Confidence 45666532 1255678888999998777753 2346778899999998864 4333433
No 183
>2qfj_A FBP-interacting repressor; protein-DNA complex; HET: DNA; 2.10A {Homo sapiens} PDB: 3uwt_A 2kxf_A 2kxh_A
Probab=28.00 E-value=1.5e+02 Score=23.50 Aligned_cols=49 Identities=16% Similarity=0.195 Sum_probs=35.1
Q ss_pred ccccccCCCCchHHHHHHHHHHhCCceEEecC---------CccEEEeCCHHHHHHHHHh
Q 045796 59 LVGYLPFLGTDLYKSLTKLADAYGPIYKFWLA---------NKLFVVVSSSSIAKEMVRD 109 (378)
Q Consensus 59 ~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g---------~~~~v~v~dpe~i~~vl~~ 109 (378)
++||+..- -....+.++..+||+|..+.+. +.-+|-..+++.++.++..
T Consensus 32 ~V~nLp~~--~t~~~l~~~f~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~A~~~ 89 (216)
T 2qfj_A 32 YVGSIYYE--LGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQ 89 (216)
T ss_dssp EEECCCTT--CCHHHHHHHHGGGSCEEEEEECCC-CC-CCCSEEEEEESSHHHHHHHHHH
T ss_pred EEECCCCC--CCHHHHHHHHHhCCCEEEEEEeecCCCCccCceEEEEeCCHHHHHHHHHH
Confidence 45665532 1256678888999999887762 2347888899999999873
No 184
>2hzc_A Splicing factor U2AF 65 kDa subunit; RNA splicing, RRM, RNA recognition, alternative conformation binding protein; HET: P6G; 1.47A {Homo sapiens} PDB: 1u2f_A
Probab=27.91 E-value=1.3e+02 Score=19.77 Aligned_cols=54 Identities=22% Similarity=0.325 Sum_probs=36.3
Q ss_pred ccccccCCCCchHHHHHHHHHHh----C-------CceEEecC---CccEEEeCCHHHHHHHHHhCCCcc
Q 045796 59 LVGYLPFLGTDLYKSLTKLADAY----G-------PIYKFWLA---NKLFVVVSSSSIAKEMVRDKDTIF 114 (378)
Q Consensus 59 ~lG~~~~l~~~~~~~~~~~~~~y----G-------~i~~~~~g---~~~~v~v~dpe~i~~vl~~~~~~f 114 (378)
++||+..- .....+.++..+| | +|..+++. +.-+|-..+++.++..+.-++..+
T Consensus 10 ~V~nLp~~--~t~~~l~~~F~~~~~~~g~~~~~~~~v~~~~~~~~kg~afV~f~~~~~a~~A~~l~g~~~ 77 (87)
T 2hzc_A 10 YVGNIPFG--ITEEAMMDFFNAQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIF 77 (87)
T ss_dssp EEESCCTT--CCHHHHHHHHHHHHHHTTCCSSSSCSEEEEEECSSSSEEEEEESSHHHHHHHGGGTTCEE
T ss_pred EEeCCCCC--CCHHHHHHHHHHHhhhcccccCCCCcceEEEecCCCcEEEEEcCCHHHHHHHHhcCCCEE
Confidence 56776542 1245677777888 8 88877764 344788889999999984444333
No 185
>2x1f_A MRNA 3'-END-processing protein RNA15; transcription-RNA complex, mRNA processing; 1.60A {Saccharomyces cerevisiae} PDB: 2x1b_A 2x1a_A 2km8_B
Probab=27.67 E-value=1.4e+02 Score=20.17 Aligned_cols=49 Identities=16% Similarity=0.358 Sum_probs=34.8
Q ss_pred ccccccCCCCchHHHHHHHHHHhCCceEEecC---------CccEEEeCCHHHHHHHHHh
Q 045796 59 LVGYLPFLGTDLYKSLTKLADAYGPIYKFWLA---------NKLFVVVSSSSIAKEMVRD 109 (378)
Q Consensus 59 ~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g---------~~~~v~v~dpe~i~~vl~~ 109 (378)
++||+..- -....+.++..+||+|..+.+. +.-+|-..+++.++.++..
T Consensus 6 ~V~nLp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~Ai~~ 63 (96)
T 2x1f_A 6 YLGSIPYD--QTEEQILDLCSNVGPVINLKMMFDPQTGRSKGYAFIEFRDLESSASAVRN 63 (96)
T ss_dssp EEESCCTT--CCHHHHHHHHHTTSCEEEEECCBCTTTCCBCSEEEEEESSHHHHHHHHHH
T ss_pred EEECCCCC--CCHHHHHHHHHhcCCEEEEEEEeCCCCCccceEEEEEECCHHHHHHHHHH
Confidence 45666532 1256678888999999888763 2346788899999999854
No 186
>2ad9_A Polypyrimidine tract-binding protein 1; RBD, RRM, protein-RNA complex, RNA binding protein/RNA complex; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=27.32 E-value=1.5e+02 Score=21.70 Aligned_cols=50 Identities=18% Similarity=0.290 Sum_probs=36.3
Q ss_pred CcccccccCCCCchHHHHHHHHHHhCCceEEecC---CccEEEeCCHHHHHHHHH
Q 045796 57 LPLVGYLPFLGTDLYKSLTKLADAYGPIYKFWLA---NKLFVVVSSSSIAKEMVR 108 (378)
Q Consensus 57 ~p~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g---~~~~v~v~dpe~i~~vl~ 108 (378)
.=++||+..= -....+.++..+||+|..+.+. +.=+|-..+++.++.++.
T Consensus 33 ~LfVgNLp~~--vte~dL~~lF~~fG~V~~v~i~~~kG~AFVeF~~~e~A~~Ai~ 85 (119)
T 2ad9_A 33 VIHIRKLPID--VTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVN 85 (119)
T ss_dssp EEEEESCCTT--CCHHHHHHHHTTTSCCCEEEEEGGGTEEEEECSCHHHHHHHHH
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhcCCEEEEEEeCCCCEEEEEECCHHHHHHHHH
Confidence 3466877642 1255688888999999887754 334788889999988875
No 187
>2dnq_A RNA-binding protein 4B; RRM domain,RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.18 E-value=1.4e+02 Score=19.90 Aligned_cols=59 Identities=19% Similarity=0.317 Sum_probs=39.8
Q ss_pred cccccccCCCCchHHHHHHHHHHhCCceEEecC-CccEEEeCCHHHHHHHHHh-CCCccCCCC
Q 045796 58 PLVGYLPFLGTDLYKSLTKLADAYGPIYKFWLA-NKLFVVVSSSSIAKEMVRD-KDTIFSNRQ 118 (378)
Q Consensus 58 p~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g-~~~~v~v~dpe~i~~vl~~-~~~~f~~r~ 118 (378)
-++||+..- -....+.++..+||+|..+.+. +.-+|-..+++.++.++.. ++..+.++.
T Consensus 11 l~V~nlp~~--~t~~~l~~~F~~~G~i~~v~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~ 71 (90)
T 2dnq_A 11 LFIGNLPRE--ATEQEIRSLFEQYGKVLECDIIKNYGFVHIEDKTAAEDAIRNLHHYKLHGVN 71 (90)
T ss_dssp EEEESCCSS--CCHHHHHHHHHTSSCEEEEEEETTEEEEEESSHHHHHHHHHHHTTCBCSSCB
T ss_pred EEEeCCCCC--CCHHHHHHHHHhCCCEEEEEEECCEEEEEECCHHHHHHHHHHhcCCccCCcE
Confidence 356777642 1256688888999998887753 3446888899999999853 333444443
No 188
>2dnp_A RNA-binding protein 14; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.05 E-value=1.4e+02 Score=19.89 Aligned_cols=59 Identities=15% Similarity=0.158 Sum_probs=40.3
Q ss_pred CcccccccCCCCchHHHHHHHHHHhCCceEEecC-CccEEEeCCHHHHHHHHHh-CCCccCCC
Q 045796 57 LPLVGYLPFLGTDLYKSLTKLADAYGPIYKFWLA-NKLFVVVSSSSIAKEMVRD-KDTIFSNR 117 (378)
Q Consensus 57 ~p~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g-~~~~v~v~dpe~i~~vl~~-~~~~f~~r 117 (378)
.=++||+..- -....+.++..+||+|..+.+. +.-+|-..+++.++.++.. ++..+.++
T Consensus 11 ~l~V~nlp~~--~t~~~l~~~F~~~G~v~~~~~~~~~afV~f~~~~~a~~A~~~l~g~~~~g~ 71 (90)
T 2dnp_A 11 KIFVGNVSAA--CTSQELRSLFERRGRVIECDVVKDYAFVHMEKEADAKAAIAQLNGKEVKGK 71 (90)
T ss_dssp CEEEESCCTT--CCHHHHHHHHHHHSCEEEEEECSSCEEEEESCHHHHHHHHHHHTTCEETTE
T ss_pred EEEEeCCCCC--CCHHHHHHHHHcCCCEEEEEEECCEEEEEECCHHHHHHHHHHhCCCEECCc
Confidence 3456777642 1255678888999999888753 3447888899999999864 44344443
No 189
>2j76_E EIF-4B, EIF4B, eukaryotic translation initiation factor 4B; protein biosynthesis, RNA recognition motif, RNA binding domain, RRM, RBD, RNP; NMR {Homo sapiens}
Probab=27.00 E-value=84 Score=21.76 Aligned_cols=56 Identities=14% Similarity=0.159 Sum_probs=36.5
Q ss_pred ccccccCCCCchHHHHHHHHHHhCCceEEecCC----------ccEEEeCCHHHHHHHHHhCCCccCCC
Q 045796 59 LVGYLPFLGTDLYKSLTKLADAYGPIYKFWLAN----------KLFVVVSSSSIAKEMVRDKDTIFSNR 117 (378)
Q Consensus 59 ~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g~----------~~~v~v~dpe~i~~vl~~~~~~f~~r 117 (378)
++||+..-. -...+.++..+|| |..+.+.. .-+|-..+++.++.++.-++..+.++
T Consensus 23 ~V~nLp~~~--t~~~l~~~F~~~G-i~~v~i~~~~~~~g~~~g~afV~f~~~~~a~~Ai~l~g~~~~g~ 88 (100)
T 2j76_E 23 FLGNLPYDV--TEESIKEFFRGLN-ISAVRLPREPSNPERLKGFGYAEFEDLDSLLSALSLNEESLGNR 88 (100)
T ss_dssp EESCCSSCC--SSSHHHHHSCSSC-EEEEECSCCTTTTCCCCSCEEEEECCHHHHHHHHHTTTCCBTTB
T ss_pred EEeCCCCCC--CHHHHHHHHHhcC-CeEEEEEecCCcCCccCeEEEEEECCHHHHHHHHhcCCCEECCe
Confidence 457765421 1344667778899 88887632 33688889999999995454445444
No 190
>3zzy_A Polypyrimidine tract-binding protein 1; protein binding, peptide binding, RNA recognition motif; 1.40A {Homo sapiens} PDB: 3zzz_A
Probab=26.98 E-value=81 Score=23.69 Aligned_cols=50 Identities=12% Similarity=0.139 Sum_probs=35.8
Q ss_pred cccccccCCCCchHHHHHHHHHHhCCceEEecCC-----ccEEEeCCHHHHHHHHHh
Q 045796 58 PLVGYLPFLGTDLYKSLTKLADAYGPIYKFWLAN-----KLFVVVSSSSIAKEMVRD 109 (378)
Q Consensus 58 p~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g~-----~~~v~v~dpe~i~~vl~~ 109 (378)
-++||+..= --.+.+.++..+||+|.++.+.. .-+|...|++.++..+..
T Consensus 31 I~V~NL~~~--vte~~L~~lFs~yG~V~~V~i~~~~~gfqAFVef~~~~~A~~Ai~~ 85 (130)
T 3zzy_A 31 IIVENLFYP--VTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLS 85 (130)
T ss_dssp EEEESCCSC--CCHHHHHHHHTTSSCEEEEEEEEETTEEEEEEEESCHHHHHHHHHH
T ss_pred EEECCCCCC--CCHHHHHHHHhCcCCEEEEEEEcCCCCcEEEEEECCHHHHHHHHHH
Confidence 357887532 12566888999999988877532 257888899988888753
No 191
>1x4a_A Splicing factor, arginine/serine-rich 1 (splicing factor 2, alternate splicing factor)...; structure genomics, SURP domain, splicing factor SF2; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=26.92 E-value=1.6e+02 Score=20.49 Aligned_cols=57 Identities=25% Similarity=0.212 Sum_probs=38.2
Q ss_pred ccccccCCCCchHHHHHHHHHHhCCceEEecCC------ccEEEeCCHHHHHHHHHh-CCCccCCC
Q 045796 59 LVGYLPFLGTDLYKSLTKLADAYGPIYKFWLAN------KLFVVVSSSSIAKEMVRD-KDTIFSNR 117 (378)
Q Consensus 59 ~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g~------~~~v~v~dpe~i~~vl~~-~~~~f~~r 117 (378)
++||+..- -....+.++..+||+|..+.+.. .-+|...+++.++.++.. +...+.++
T Consensus 26 ~V~nLp~~--~t~~~l~~~F~~~G~v~~~~i~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~ 89 (109)
T 1x4a_A 26 YVGNLPPD--IRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGY 89 (109)
T ss_dssp EEESCCTT--CCHHHHHHHHGGGSCEEEEEECCSSSSSCCEEEEESCHHHHHHHHHHHTTCEETTE
T ss_pred EEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEECCCCCcEEEEEECCHHHHHHHHHHcCCCEECCe
Confidence 56777542 12566888889999997766522 337888999999999843 33344433
No 192
>2dis_A Unnamed protein product; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=26.91 E-value=1.6e+02 Score=20.45 Aligned_cols=49 Identities=14% Similarity=0.137 Sum_probs=35.6
Q ss_pred ccccccCCCCchHHHHHHHHHHhCC-ceEEecC----------CccEEEeCCHHHHHHHHHh
Q 045796 59 LVGYLPFLGTDLYKSLTKLADAYGP-IYKFWLA----------NKLFVVVSSSSIAKEMVRD 109 (378)
Q Consensus 59 ~lG~~~~l~~~~~~~~~~~~~~yG~-i~~~~~g----------~~~~v~v~dpe~i~~vl~~ 109 (378)
++||+..- -....+.++..+||+ |..+.+. +.-+|-..+++.++..+..
T Consensus 12 ~V~nLp~~--~t~~~l~~~f~~~G~~v~~v~i~~~~~~~g~~~g~afV~f~~~~~A~~A~~~ 71 (109)
T 2dis_A 12 FIGGIPKM--KKREEILEEIAKVTEGVLDVIVYASAADKMKNRGFAFVEYESHRAAAMARRK 71 (109)
T ss_dssp EEECCCTT--SCHHHHHHHHHHHSTTEEEEECCSSSCTTTTTCCEEEEEESSHHHHHHHHTT
T ss_pred EEeCCCCc--CCHHHHHHHHHHhcCCceEEEEEccCCCCCCcCcEEEEEecCHHHHHHHHHH
Confidence 56777642 125667888899998 8877754 2346888899999999875
No 193
>2dgo_A Cytotoxic granule-associated RNA binding protein 1; RRM domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2rne_A 2dh7_A
Probab=26.51 E-value=1.5e+02 Score=20.93 Aligned_cols=58 Identities=16% Similarity=0.113 Sum_probs=38.9
Q ss_pred cccccccCCCCchHHHHHHHHHHhCCceEEecCC---------ccEEEeCCHHHHHHHHHh-CCCccCCC
Q 045796 58 PLVGYLPFLGTDLYKSLTKLADAYGPIYKFWLAN---------KLFVVVSSSSIAKEMVRD-KDTIFSNR 117 (378)
Q Consensus 58 p~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g~---------~~~v~v~dpe~i~~vl~~-~~~~f~~r 117 (378)
=++||+..- -....+.++..+||+|..+.+.. .-+|-..+++.++.++.. ++..+.++
T Consensus 18 l~V~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~ 85 (115)
T 2dgo_A 18 VFVGDLSPE--ITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGR 85 (115)
T ss_dssp EEEESCCTT--CCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHTTTCEETTE
T ss_pred EEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEEcCCCCCcceEEEEEECCHHHHHHHHHHhCCCEECCE
Confidence 356777642 12556788889999988776532 236888899999999864 33334433
No 194
>2cqb_A Peptidyl-prolyl CIS-trans isomerase E; RNA recognition motif, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=26.38 E-value=1.5e+02 Score=20.23 Aligned_cols=62 Identities=18% Similarity=0.101 Sum_probs=40.3
Q ss_pred CCCCcccccccCCCCchHHHHHHHHHHhCCceEEecCC---------ccEEEeCCHHHHHHHHHh-CCCccCCC
Q 045796 54 PRGLPLVGYLPFLGTDLYKSLTKLADAYGPIYKFWLAN---------KLFVVVSSSSIAKEMVRD-KDTIFSNR 117 (378)
Q Consensus 54 P~~~p~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g~---------~~~v~v~dpe~i~~vl~~-~~~~f~~r 117 (378)
|...=++||+..- -....+.++..+||+|..+.+.. .-+|-..+++.++.++.. ++..+.++
T Consensus 11 ~~~~l~V~nLp~~--~t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~ 82 (102)
T 2cqb_A 11 TKRVLYVGGLAEE--VDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNESELFGR 82 (102)
T ss_dssp CCSCEEEESCCSS--CCHHHHHHHHTTTSCCCCEECCCCSSSCCCSSEEEECCSSHHHHHHHHHHHTTEEETTE
T ss_pred CCCEEEEeCCCCC--CCHHHHHHHhhccCCEEEEEEEecCCCCCcceEEEEEECCHHHHHHHHHHhCCCEECCc
Confidence 3334456877643 12566788889999988777621 235777899999999864 44344433
No 195
>2f3j_A RNA and export factor binding protein 2; RRM domain, RBD domain., transport protein; NMR {Mus musculus}
Probab=26.37 E-value=2.3e+02 Score=22.13 Aligned_cols=47 Identities=15% Similarity=0.156 Sum_probs=33.9
Q ss_pred HHHHHHHHHHhCCceEEecC--------CccEEEeCCHHHHHHHHHh-CCCccCCC
Q 045796 71 YKSLTKLADAYGPIYKFWLA--------NKLFVVVSSSSIAKEMVRD-KDTIFSNR 117 (378)
Q Consensus 71 ~~~~~~~~~~yG~i~~~~~g--------~~~~v~v~dpe~i~~vl~~-~~~~f~~r 117 (378)
...+.++..+||+|..+.+. +.-+|...+++.++.++.. ++..+.++
T Consensus 102 e~~L~~~F~~~G~I~~v~i~~d~~g~~kG~afV~F~~~~~A~~Ai~~lng~~l~Gr 157 (177)
T 2f3j_A 102 DADIQELFAEFGTLKKAAVDYDRSGRSLGTADVHFERRADALKAMKQYKGVPLDGR 157 (177)
T ss_dssp HHHHHHHHHHTSCCSEEEECCCTTSSCSCCEEEEESCHHHHHHHHHHSTTCBCSSS
T ss_pred HHHHHHHHHhcCCeEEEEEEECCCCCEeeEEEEEeCCHHHHHHHHHHhCCCEECCE
Confidence 55688888999999887763 2347888999999999874 33344443
No 196
>1qm9_A Polypyrimidine tract-binding protein; ribonucleoprotein, RNP, RNA, spicing, translation; NMR {Homo sapiens} SCOP: d.58.7.1 d.58.7.1
Probab=26.16 E-value=1.5e+02 Score=23.24 Aligned_cols=59 Identities=17% Similarity=0.142 Sum_probs=39.3
Q ss_pred ccccccCCCCchHHHHHHHHHHhCCceEEecC----CccEEEeCCHHHHHHHHH-hCCCccCCCC
Q 045796 59 LVGYLPFLGTDLYKSLTKLADAYGPIYKFWLA----NKLFVVVSSSSIAKEMVR-DKDTIFSNRQ 118 (378)
Q Consensus 59 ~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g----~~~~v~v~dpe~i~~vl~-~~~~~f~~r~ 118 (378)
++||+..- .-....+.++..+||+|..+.+. +.-+|-..+++.++..+. -++..+.+++
T Consensus 7 ~v~nlp~~-~~~~~~l~~~F~~~G~i~~v~i~~~~~g~afV~f~~~~~a~~A~~~l~~~~~~g~~ 70 (198)
T 1qm9_A 7 LVSNLNPE-RVTPQSLFILFGVYGDVQRVKILFNKKENALVQMADGNQAQLAMSHLNGHKLHGKP 70 (198)
T ss_dssp EEECCCSS-SCCHHHHHHHHHTTCCCSEEECSTTCSSCCEEECTTTHHHHHHHHHHTTCCCSSCC
T ss_pred EEeCCCcc-cCCHHHHHHHHHhcCCEEEEEEEeCCCCEEEEEECCHHHHHHHHHHhCCCeecCeE
Confidence 34665531 01146677888999999888764 335788899999999986 3444454443
No 197
>1l3k_A Heterogeneous nuclear ribonucleoprotein A1; nuclear protein hnRNP A1, RNA-recognition motif, RNA- binding, UP1, RNA binding protein; 1.10A {Homo sapiens} SCOP: d.58.7.1 d.58.7.1 PDB: 1u1k_A* 1u1l_A* 1u1m_A* 1u1n_A* 1u1o_A 1u1p_A* 1u1q_A 1u1r_A* 1pgz_A* 1ha1_A 1po6_A* 2up1_A* 1up1_A
Probab=25.55 E-value=85 Score=24.65 Aligned_cols=57 Identities=18% Similarity=0.163 Sum_probs=38.5
Q ss_pred ccccccCCCCchHHHHHHHHHHhCCceEEecCC---------ccEEEeCCHHHHHHHHHhCCCccCCC
Q 045796 59 LVGYLPFLGTDLYKSLTKLADAYGPIYKFWLAN---------KLFVVVSSSSIAKEMVRDKDTIFSNR 117 (378)
Q Consensus 59 ~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g~---------~~~v~v~dpe~i~~vl~~~~~~f~~r 117 (378)
++||+..- -....+.++..+||+|..+.+.. .-+|-..+++.+..++..++..+.++
T Consensus 108 ~V~nLp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~F~~~~~A~~A~~~~~~~~~G~ 173 (196)
T 1l3k_A 108 FVGGIKED--TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGH 173 (196)
T ss_dssp EEECCTTT--CCHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHCSCCEETTE
T ss_pred EEeCCCCC--CCHHHHHHHHhcCCCeEEEEEeecCCCCCccceEEEEECCHHHHHHHHHhCCcEECCE
Confidence 45665432 12566788889999987776531 13688889999999997665445444
No 198
>2jvr_A Nucleolar protein 3; RNA recognition motif, nucleus, phosphorylation, ribonucleoprotein, ribosome biogenesis, RNA-binding; NMR {Saccharomyces cerevisiae} PDB: 2osr_A
Probab=25.54 E-value=1.8e+02 Score=20.87 Aligned_cols=57 Identities=16% Similarity=0.061 Sum_probs=39.2
Q ss_pred ccccccCCCCchHHHHHHHHHHhC-CceEEecC-----CccEEEeCCHHHHHHHHHh-CCCccCCC
Q 045796 59 LVGYLPFLGTDLYKSLTKLADAYG-PIYKFWLA-----NKLFVVVSSSSIAKEMVRD-KDTIFSNR 117 (378)
Q Consensus 59 ~lG~~~~l~~~~~~~~~~~~~~yG-~i~~~~~g-----~~~~v~v~dpe~i~~vl~~-~~~~f~~r 117 (378)
++||+..- .....+.++..+|| +|..+.+. |.-+|-..+++.++..+.. ++..+.+|
T Consensus 32 ~VgnLp~~--~te~dL~~~F~~~G~~v~~v~i~~~~~rGfaFV~F~~~e~A~~Ai~~lng~~l~Gr 95 (111)
T 2jvr_A 32 TMKNLPEG--CSWQDLKDLARENSLETTFSSVNTRDFDGTGALEFPSEEILVEALERLNNIEFRGS 95 (111)
T ss_dssp EEECSSCC--CCHHHHHHHHHHHTCCCSEEECSSCSSSCCEEEEESSHHHHHHHHHHTTTEEETTE
T ss_pred EEECCCCC--CCHHHHHHHHHHhCCeeEEEEEEcCCCCCEEEEEECCHHHHHHHHHHcCCCEECCe
Confidence 56777642 22567888899999 78776652 3457888999999999864 33334433
No 199
>1l3k_A Heterogeneous nuclear ribonucleoprotein A1; nuclear protein hnRNP A1, RNA-recognition motif, RNA- binding, UP1, RNA binding protein; 1.10A {Homo sapiens} SCOP: d.58.7.1 d.58.7.1 PDB: 1u1k_A* 1u1l_A* 1u1m_A* 1u1n_A* 1u1o_A 1u1p_A* 1u1q_A 1u1r_A* 1pgz_A* 1ha1_A 1po6_A* 2up1_A* 1up1_A
Probab=25.12 E-value=1e+02 Score=24.21 Aligned_cols=57 Identities=14% Similarity=0.169 Sum_probs=39.2
Q ss_pred cccccccCCCCchHHHHHHHHHHhCCceEEecC---------CccEEEeCCHHHHHHHHHhCCCccCC
Q 045796 58 PLVGYLPFLGTDLYKSLTKLADAYGPIYKFWLA---------NKLFVVVSSSSIAKEMVRDKDTIFSN 116 (378)
Q Consensus 58 p~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g---------~~~~v~v~dpe~i~~vl~~~~~~f~~ 116 (378)
=++||+..- -....+.++..+||+|..+.+. +.-+|...+++.++..+..++..+.+
T Consensus 16 l~V~nLp~~--~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~A~~~~~~~~~g 81 (196)
T 1l3k_A 16 LFIGGLSFE--TTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDG 81 (196)
T ss_dssp EEEESCCTT--CCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHTCSCEETT
T ss_pred EEEeCCCCC--CCHHHHHHHHHhCCCEEEEEEEEcCCCCCccceEEEEeCCHHHHHHHHhcCCCEECC
Confidence 356777642 1256678888999998776642 13368889999999999765444433
No 200
>1x5t_A Splicing factor 3B subunit 4; structure genomics, RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=25.06 E-value=1.2e+02 Score=20.60 Aligned_cols=57 Identities=19% Similarity=0.186 Sum_probs=37.4
Q ss_pred ccccccCCCCchHHHHHHHHHHhCCceEE-ecC---------CccEEEeCCHHHHHHHHHh-CCCccCCC
Q 045796 59 LVGYLPFLGTDLYKSLTKLADAYGPIYKF-WLA---------NKLFVVVSSSSIAKEMVRD-KDTIFSNR 117 (378)
Q Consensus 59 ~lG~~~~l~~~~~~~~~~~~~~yG~i~~~-~~g---------~~~~v~v~dpe~i~~vl~~-~~~~f~~r 117 (378)
++||+..- -....+.++..+||+|..+ ++. +.-+|-..+++.++.++.. ++..+.++
T Consensus 9 ~V~nLp~~--~t~~~l~~~F~~~G~i~~~~~i~~~~~~g~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~ 76 (96)
T 1x5t_A 9 FIGNLDPE--IDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNR 76 (96)
T ss_dssp EEECCCTT--CCHHHHHHHHHTTSCBSSCCEECCCTTTCSCCSEEEEEBSSHHHHHHHHHTTTTCEETTE
T ss_pred EEeCCCCC--CCHHHHHHHHHhcCCeeEEEEEEEcCCCCCcCeEEEEEECCHHHHHHHHHHcCCCEECCE
Confidence 45766542 1256688888999998665 432 2346888899999999974 33334433
No 201
>1fxl_A Paraneoplastic encephalomyelitis antigen HUD; protein-RNA complex, AU-rich element, transcription/RNA complex; 1.80A {Homo sapiens} SCOP: d.58.7.1 d.58.7.1 PDB: 1g2e_A 1fnx_H 1d8z_A 1d9a_A 3hi9_A
Probab=24.76 E-value=1.2e+02 Score=22.87 Aligned_cols=56 Identities=20% Similarity=0.186 Sum_probs=37.0
Q ss_pred ccccccCCCCchHHHHHHHHHHhCCceEEecC---------CccEEEeCCHHHHHHHHHh-CCCccCC
Q 045796 59 LVGYLPFLGTDLYKSLTKLADAYGPIYKFWLA---------NKLFVVVSSSSIAKEMVRD-KDTIFSN 116 (378)
Q Consensus 59 ~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g---------~~~~v~v~dpe~i~~vl~~-~~~~f~~ 116 (378)
++||+..- -....+.++..+||+|..+.+. +.-+|-..+++.++..+.. ++..+.+
T Consensus 6 ~v~nlp~~--~~~~~l~~~f~~~G~i~~v~~~~~~~~~~~~g~afV~f~~~~~A~~a~~~l~~~~~~g 71 (167)
T 1fxl_A 6 IVNYLPQN--MTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQT 71 (167)
T ss_dssp EEESCCTT--CCHHHHHHHHHTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCEETT
T ss_pred EEcCCCCC--CCHHHHHHHHHhcCCeEEEEEEeCCCCCcceeEEEEEECCHHHHHHHHHHcCCCccCC
Confidence 34555432 1255678888999998777653 2346888999999999864 4434433
No 202
>2dnh_A Bruno-like 5, RNA binding protein; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2dnk_A 2dno_A
Probab=24.05 E-value=1.8e+02 Score=20.01 Aligned_cols=50 Identities=22% Similarity=0.235 Sum_probs=35.5
Q ss_pred cccccccCCCCchHHHHHHHHHHhCCceEEecC--------CccEEEeCCHHHHHHHHHh
Q 045796 58 PLVGYLPFLGTDLYKSLTKLADAYGPIYKFWLA--------NKLFVVVSSSSIAKEMVRD 109 (378)
Q Consensus 58 p~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g--------~~~~v~v~dpe~i~~vl~~ 109 (378)
=++||+..- -....+.++..+||+|..+.+. +.-+|-..+++.++.++..
T Consensus 18 l~v~nLp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~A~~Ai~~ 75 (105)
T 2dnh_A 18 LFVGMLNKQ--QSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHA 75 (105)
T ss_dssp EEEESCCTT--CCHHHHHHHHTTTSCEEEEEEEECSSSCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEECCCCCcCcEEEEEeCCHHHHHHHHHH
Confidence 356777642 1255678888999998877753 2346788899999999864
No 203
>1wf1_A RNA-binding protein RALY; structural genomics, RRM domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 1wf2_A
Probab=24.04 E-value=1.9e+02 Score=20.22 Aligned_cols=59 Identities=15% Similarity=0.173 Sum_probs=38.8
Q ss_pred cccccccCCCCchHHHHHHHHHHhCCceEEecC-CccEEEeCCHHHHHHHHHh-CCCccCCC
Q 045796 58 PLVGYLPFLGTDLYKSLTKLADAYGPIYKFWLA-NKLFVVVSSSSIAKEMVRD-KDTIFSNR 117 (378)
Q Consensus 58 p~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g-~~~~v~v~dpe~i~~vl~~-~~~~f~~r 117 (378)
-++||+..-. -....+.++..+||+|..+.+. +.-+|-..+++.++.++.. ++..+.++
T Consensus 30 l~V~nl~~~~-~t~~~l~~~F~~~G~v~~v~i~~g~afV~f~~~~~A~~A~~~l~g~~~~g~ 90 (110)
T 1wf1_A 30 VFIGNLNTAL-VKKSDVETIFSKYGRVAGCSVHKGYAFVQYSNERHARAAVLGENGRVLAGQ 90 (110)
T ss_dssp EEECSCCCSS-CCHHHHHHHHGGGSCCSEEEEETTEEEEECSSSHHHHHHHHHHTTCEETTE
T ss_pred EEEeCCCccc-CCHHHHHHHHHhCCCeEEEEEeCCEEEEEECCHHHHHHHHHHcCCCEECCe
Confidence 3567776420 1256688888999998777652 3346777899999998854 44444443
No 204
>1wf0_A TDP-43, TAR DNA-binding protein-43; structural genomics, RRM domain, riken structural genomics/proteomics initiative RSGI, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=23.55 E-value=87 Score=20.94 Aligned_cols=47 Identities=19% Similarity=0.293 Sum_probs=33.5
Q ss_pred ccccccCCCCchHHHHHHHHHHhCCceEEecC----CccEEEeCCHHHHHHHH
Q 045796 59 LVGYLPFLGTDLYKSLTKLADAYGPIYKFWLA----NKLFVVVSSSSIAKEMV 107 (378)
Q Consensus 59 ~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g----~~~~v~v~dpe~i~~vl 107 (378)
++||+..- -....+.++..+||+|..+++. +.-+|-..+++.++++.
T Consensus 9 ~V~nLp~~--~te~~l~~~F~~~G~i~~v~i~~~~~g~afV~f~~~~~a~~~~ 59 (88)
T 1wf0_A 9 FVGRCTGD--MTEDELREFFSQYGDVMDVFIPKPFRAFAFVTFADDQIAQSLC 59 (88)
T ss_dssp EEESCCSS--SCHHHHHHHSTTTSCCCEEECCSSCCSCCEEECSCHHHHHHTT
T ss_pred EEeCCCCC--CCHHHHHHHHHHcCCeeEEEEecCCCCEEEEEECCHHHHHHHh
Confidence 45776532 1256677888999999888764 34578889999998754
No 205
>1why_A Hypothetical protein riken cDNA 1810017N16; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1
Probab=23.49 E-value=1.8e+02 Score=19.74 Aligned_cols=57 Identities=16% Similarity=0.084 Sum_probs=39.2
Q ss_pred CcccccccCCCCchHHHHHHHHHHhCCceEEecCC---ccEEEeCCHHHHHHHHHh-CCCccC
Q 045796 57 LPLVGYLPFLGTDLYKSLTKLADAYGPIYKFWLAN---KLFVVVSSSSIAKEMVRD-KDTIFS 115 (378)
Q Consensus 57 ~p~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g~---~~~v~v~dpe~i~~vl~~-~~~~f~ 115 (378)
.=++||+..-. ....+.++..+||+|..+.+.. .-+|-..+++.++.++.. ++..+.
T Consensus 19 ~l~V~nlp~~~--t~~~l~~~F~~~G~v~~v~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~ 79 (97)
T 1why_A 19 RLWVGGLGPNT--SLAALAREFDRFGSIRTIDHVKGDSFAYIQYESLDAAQAACAKMRGFPLG 79 (97)
T ss_dssp CEEEECCCSSC--CHHHHHHHHHTTSCEEEEEECSSSCCEEEEESSHHHHHHHHHHHTTCBCS
T ss_pred EEEEeCCCCCC--CHHHHHHHHHhcCCeeEEEEeCCCCEEEEEECCHHHHHHHHHHHCCCEeC
Confidence 34567776431 2566788889999998887542 346788899999999874 443444
No 206
>2cpe_A RNA-binding protein EWS; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=23.47 E-value=1.1e+02 Score=21.55 Aligned_cols=57 Identities=16% Similarity=0.035 Sum_probs=37.8
Q ss_pred ccccccCCCCchHHHHHHHHHHhCCce--------EEecCC---------ccEEEeCCHHHHHHHHHh-CCCccCCC
Q 045796 59 LVGYLPFLGTDLYKSLTKLADAYGPIY--------KFWLAN---------KLFVVVSSSSIAKEMVRD-KDTIFSNR 117 (378)
Q Consensus 59 ~lG~~~~l~~~~~~~~~~~~~~yG~i~--------~~~~g~---------~~~v~v~dpe~i~~vl~~-~~~~f~~r 117 (378)
++||+..- -....+.++..+||+|. .+.+.. .-+|-..+++.++.++.. ++..+.++
T Consensus 19 ~V~nLp~~--~t~~~l~~~F~~~G~i~~~~~~~~~~v~i~~~~~~g~~~g~afV~f~~~~~A~~Ai~~l~g~~~~g~ 93 (113)
T 2cpe_A 19 YVQGLNDS--VTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPPTAKAAVEWFDGKDFQGS 93 (113)
T ss_dssp EEECCCTT--CCHHHHHHHHTTTSCBCBCSSSCCBSEECCBCTTTCSBCSEEEEEBSSHHHHHHHHHHHTTCEETTE
T ss_pred EEcCCCCC--CCHHHHHHHHHhcCCEeEccccCccCEEEEEeCCCCCeeeEEEEEECCHHHHHHHHHHcCCCccCCC
Confidence 56777632 12556788889999986 344321 237888899999999874 44445444
No 207
>2ku7_A MLL1 PHD3-CYP33 RRM chimeric protein; transcriptional regulation, RRM domain, transcr; NMR {Homo sapiens}
Probab=23.14 E-value=2.2e+02 Score=20.72 Aligned_cols=49 Identities=20% Similarity=0.096 Sum_probs=34.6
Q ss_pred ccccccCCCCchHHHHHHHHHHhCCceEEecC---------CccEEEeCCHHHHHHHHHh
Q 045796 59 LVGYLPFLGTDLYKSLTKLADAYGPIYKFWLA---------NKLFVVVSSSSIAKEMVRD 109 (378)
Q Consensus 59 ~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g---------~~~~v~v~dpe~i~~vl~~ 109 (378)
++||+..- -....+.++..+||+|..+.+. +.-+|-..+++.++.++..
T Consensus 67 ~v~nlp~~--~~~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 124 (140)
T 2ku7_A 67 YVGGLAEE--VDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDN 124 (140)
T ss_dssp EEECCCTT--CCHHHHHHHHGGGSCEEEEECCCCTTTCCCCSEEEEEESCHHHHHHHHHH
T ss_pred EEEeCCCC--CCHHHHHHHHHhcCCEEEEEEeecCCCCCcCcEEEEEECCHHHHHHHHHH
Confidence 44555432 1246688888999999888763 2236888899999999864
No 208
>2dgp_A Bruno-like 4, RNA binding protein; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2dgq_A
Probab=23.13 E-value=1.9e+02 Score=19.93 Aligned_cols=50 Identities=20% Similarity=0.254 Sum_probs=35.9
Q ss_pred cccccccCCCCchHHHHHHHHHHhCCceEEecCC---------ccEEEeCCHHHHHHHHHh
Q 045796 58 PLVGYLPFLGTDLYKSLTKLADAYGPIYKFWLAN---------KLFVVVSSSSIAKEMVRD 109 (378)
Q Consensus 58 p~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g~---------~~~v~v~dpe~i~~vl~~ 109 (378)
=++||+..- -....+.++..+||+|..+.+.. .-+|-..+++.++.++..
T Consensus 16 l~V~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~A~~~ 74 (106)
T 2dgp_A 16 LFIGQIPRN--LDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSA 74 (106)
T ss_dssp EEEESCCTT--CCHHHHHHHHHHHSCCCEEECCCCSSSCSCCSEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCCC--CCHHHHHHHHHhcCCeeEEEEEecCCCCCcceEEEEEECCHHHHHHHHHH
Confidence 356777642 12566888889999998887532 346788899999999863
No 209
>3r27_A HnRNP L, heterogeneous nuclear ribonucleoprotein L; RBD fold, protein binding, nucleus; 2.04A {Homo sapiens}
Probab=23.12 E-value=2e+02 Score=20.26 Aligned_cols=54 Identities=15% Similarity=0.022 Sum_probs=38.0
Q ss_pred CCCCcccccccCCCCchHHHHHHHHHHhCCceEEecC---CccEEEeCCHHHHHHHHHh
Q 045796 54 PRGLPLVGYLPFLGTDLYKSLTKLADAYGPIYKFWLA---NKLFVVVSSSSIAKEMVRD 109 (378)
Q Consensus 54 P~~~p~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g---~~~~v~v~dpe~i~~vl~~ 109 (378)
|...=++||+..= -.-..+.++..+||+|..+.+. +.-+|-..+.+.++..+..
T Consensus 20 ps~~l~V~NLp~~--~te~~L~~lF~~fG~V~~v~i~~~kg~AFVef~~~~~A~~Av~~ 76 (100)
T 3r27_A 20 ASPVVHIRGLIDG--VVEADLVEALQEFGPISYVVVMPKKRQALVEFEDVLGACNAVNY 76 (100)
T ss_dssp CCSEEEEESCCTT--CCHHHHHHHHGGGSCEEEEEEETTTTEEEEEESSHHHHHHHHHH
T ss_pred CCcEEEEeCCCCC--CCHHHHHHHHhccCCEEEEEEEcCCCEEEEEECCHHHHHHHHHH
Confidence 3334567887642 1245678888999999877653 4457888899999888754
No 210
>2dgt_A RNA-binding protein 30; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.64 E-value=1.8e+02 Score=19.47 Aligned_cols=57 Identities=23% Similarity=0.297 Sum_probs=39.1
Q ss_pred cccccccCCCCchHHHHHHHHHHhCCceEEecC-CccEEEeCCHHHHHHHHHh-CCCccCC
Q 045796 58 PLVGYLPFLGTDLYKSLTKLADAYGPIYKFWLA-NKLFVVVSSSSIAKEMVRD-KDTIFSN 116 (378)
Q Consensus 58 p~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g-~~~~v~v~dpe~i~~vl~~-~~~~f~~ 116 (378)
=++||+..- -....+.++..+||+|..+.+. +.-+|-..+++.++.++.. ++..+.+
T Consensus 13 l~V~nLp~~--~t~~~l~~~F~~~G~v~~v~~~~~~afV~f~~~~~a~~A~~~l~g~~~~g 71 (92)
T 2dgt_A 13 LHVGNISPT--CTNQELRAKFEEYGPVIECDIVKDYAFVHMERAEDAVEAIRGLDNTEFQG 71 (92)
T ss_dssp EEEESCCSS--CCHHHHHHHHHTTSCCCEEEECSSEEEEEESCHHHHHHHHHHHTTEEETT
T ss_pred EEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEECCEEEEEECCHHHHHHHHHHhCCCeeCC
Confidence 356777642 1256688888999999888754 3446778899999999864 4444443
No 211
>2ki2_A SS-DNA binding protein 12RNP2; HP0827, RRM, SS-DNA binding proteins, RNA binding protein/SS-DNA binding protein complex; NMR {Helicobacter pylori}
Probab=22.61 E-value=1.1e+02 Score=20.52 Aligned_cols=46 Identities=22% Similarity=0.338 Sum_probs=30.4
Q ss_pred HHHHHHHHHHhCCceEEecCC---------ccEEEeCCHHHHHHHHHh-CCCccCCC
Q 045796 71 YKSLTKLADAYGPIYKFWLAN---------KLFVVVSSSSIAKEMVRD-KDTIFSNR 117 (378)
Q Consensus 71 ~~~~~~~~~~yG~i~~~~~g~---------~~~v~v~dpe~i~~vl~~-~~~~f~~r 117 (378)
...+.++..+||+|..+.+.. .-+|-..+++ ++..+.. ++..+.++
T Consensus 15 ~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~-a~~a~~~l~g~~~~g~ 70 (90)
T 2ki2_A 15 SEQVKELFSQFGKVFNVKLIYDRETKKPKGFGFVEMQEES-VSEAIAKLDNTDFMGR 70 (90)
T ss_dssp HHHHTTTHHHHTCCSEEEECCCSSSCCCCEEEEEEECTTH-HHHHHHTSCSSCCSSS
T ss_pred HHHHHHHHHhcCCEEEEEEEEcCCCCCcceEEEEEECCHH-HHHHHHHhCCCEECCe
Confidence 455777788999988777531 2367788999 7777654 33344443
No 212
>2xs2_A Deleted in azoospermia-like; RNA binding protein-RNA complex; 1.35A {Mus musculus} PDB: 2xs7_A 2xs5_A 2xsf_A
Probab=22.53 E-value=43 Score=23.38 Aligned_cols=56 Identities=14% Similarity=0.183 Sum_probs=37.3
Q ss_pred ccccccCCCCchHHHHHHHHHHhCCceEEecC--------CccEEEeCCHHHHHHHHHhCCCccCCC
Q 045796 59 LVGYLPFLGTDLYKSLTKLADAYGPIYKFWLA--------NKLFVVVSSSSIAKEMVRDKDTIFSNR 117 (378)
Q Consensus 59 ~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g--------~~~~v~v~dpe~i~~vl~~~~~~f~~r 117 (378)
++||+..- -....+.++..+||+|..+.+. +.-+|-..+++.++.++. ++..+.++
T Consensus 13 ~V~nLp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~Ai~-~~~~~~g~ 76 (102)
T 2xs2_A 13 FVGGIDVR--MDETEIRSFFARYGSVKEVKIITDRTGVSKGYGFVSFYNDVDVQKIVE-SQINFHGK 76 (102)
T ss_dssp EEECCCTT--CCHHHHHHHHGGGSCEEEEEEEECTTSCEEEEEEEEESSCCCHHHHTT-CCCEETTE
T ss_pred EEeCCCCC--CCHHHHHHHHHhCCCeEEEEEEECCCCCccceEEEEECCHHHHHHHHh-CCCeECCE
Confidence 56776632 1255677888999998877652 233677889999998887 44444433
No 213
>2cpx_A Hypothetical protein FLJ11016; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=22.51 E-value=1.7e+02 Score=20.62 Aligned_cols=60 Identities=12% Similarity=0.127 Sum_probs=38.2
Q ss_pred CcccccccCCCCchHHHHHHHHHHhCCc----eEEec--C---CccEEEeCCHHHHHHHHHh-CCCccCCCC
Q 045796 57 LPLVGYLPFLGTDLYKSLTKLADAYGPI----YKFWL--A---NKLFVVVSSSSIAKEMVRD-KDTIFSNRQ 118 (378)
Q Consensus 57 ~p~lG~~~~l~~~~~~~~~~~~~~yG~i----~~~~~--g---~~~~v~v~dpe~i~~vl~~-~~~~f~~r~ 118 (378)
.=++||+..- -....+.++..+||+| +.+.. | +.-+|-..+++.++.++.. ++..+.+++
T Consensus 27 ~l~V~nLp~~--~t~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~ 96 (115)
T 2cpx_A 27 VLYLKNLSPR--VTERDLVSLFARFQEKKGPPIQFRMMTGRMRGQAFITFPNKEIAWQALHLVNGYKLYGKI 96 (115)
T ss_dssp EEEEECCCTT--CCHHHHHHHTHHHHHSSSSCCEEEEECSSSCSEEEEECSSHHHHHHHHHHSTTCBCSSCB
T ss_pred EEEEeCCCCC--CCHHHHHHHHHHhCCccceEEEEEcCCCccceEEEEEECCHHHHHHHHHHhCCCEeCCcE
Confidence 3456777642 1255677888899987 44442 1 2346888899999999875 444444443
No 214
>2cjk_A Nuclear polyadenylated RNA-binding protein 4; HRP1, RNA-binding, RNA processing, mRNA processing, nonsense-mediated mRNA decay, cleavage; NMR {Saccharomyces cerevisiae} PDB: 2km8_C
Probab=22.50 E-value=1.2e+02 Score=22.94 Aligned_cols=57 Identities=21% Similarity=0.173 Sum_probs=37.8
Q ss_pred ccccccCCCCchHHHHHHHHHHhCCceEEecCC---------ccEEEeCCHHHHHHHHHhCCCccCCC
Q 045796 59 LVGYLPFLGTDLYKSLTKLADAYGPIYKFWLAN---------KLFVVVSSSSIAKEMVRDKDTIFSNR 117 (378)
Q Consensus 59 ~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g~---------~~~v~v~dpe~i~~vl~~~~~~f~~r 117 (378)
++||+..- -....+.++..+||+|..+.+.. .-+|-..+++.++.++..++..+.++
T Consensus 91 ~V~nlp~~--~t~~~l~~~F~~~G~i~~~~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~~~~~~~g~ 156 (167)
T 2cjk_A 91 FVGGIGPD--VRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDR 156 (167)
T ss_dssp EEEEECTT--CCHHHHHHHHHTTSCCSEEECCCSSSSSTTSEEEEEEESSHHHHHHHHHCSEECSSSS
T ss_pred EECCCCCC--CCHHHHHHHHHhCccEEEEEEEEcCCCCccceEEEEEECCHHHHHHHHhCCCEEeCCe
Confidence 44555432 12556788889999998777532 23688889999999997544444443
No 215
>2dng_A Eukaryotic translation initiation factor 4H; RRM domain, RBD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=22.27 E-value=1.1e+02 Score=21.11 Aligned_cols=62 Identities=19% Similarity=0.268 Sum_probs=39.1
Q ss_pred CCCCCcccccccCCCCchHHHHHHHHHHhCCceEEecCC---------ccEEEeCCHHHHHHHHHhCCCccCCC
Q 045796 53 GPRGLPLVGYLPFLGTDLYKSLTKLADAYGPIYKFWLAN---------KLFVVVSSSSIAKEMVRDKDTIFSNR 117 (378)
Q Consensus 53 gP~~~p~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g~---------~~~v~v~dpe~i~~vl~~~~~~f~~r 117 (378)
.|...-++||+..-. ....+.++..+|| |..+++.. .-+|-..+++.++.++.-++..+.++
T Consensus 13 ~~~~~l~V~nLp~~~--t~~~l~~~F~~~g-i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~l~g~~~~g~ 83 (103)
T 2dng_A 13 EPPYTAYVGNLPFNT--VQGDIDAIFKDLS-IRSVRLVRDKDTDKFKGFCYVEFDEVDSLKEALTYDGALLGDR 83 (103)
T ss_dssp SSCEEEEEESCCTTC--CHHHHHHHTTTSC-EEEEEEEECSSSCSEEEEEEEEESSHHHHHHHGGGTTCEETTE
T ss_pred CCCeEEEEeCCCCCC--CHHHHHHHHHhCC-ceEEEEeecCCCCccceEEEEEECCHHHHHHHHhhCCCeECCe
Confidence 333344668776431 1456777888897 77776531 23688889999999985444444443
No 216
>1d8j_A General transcription factor TFIIE-beta; winged helix-turn-helix, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: a.4.5.18 PDB: 1d8k_A
Probab=21.40 E-value=45 Score=22.82 Aligned_cols=37 Identities=19% Similarity=0.228 Sum_probs=28.2
Q ss_pred CCCCCHHHHHHHHHHHHhhcccchHHHHHHHHH-HHhcCchHH
Q 045796 306 SISLNRTELIALLLDIILGGTDTTTTIMEWTLT-KLLQFPVEM 347 (378)
Q Consensus 306 ~~~l~~~ei~~~~~~~~~AG~dTTa~tl~~~l~-~L~~~P~iq 347 (378)
+.++|-+||.+++. ..|.+.....|... .|-+||.|+
T Consensus 29 ~~PltL~EILde~~-----~~d~~~~~k~wL~~eaL~~npkI~ 66 (81)
T 1d8j_A 29 THPLTLDEILDETQ-----HLDIGLKQKQWLMTEALVNNPKIE 66 (81)
T ss_dssp CSCBCHHHHHHHHT-----CSSCCHHHHHHHHTTHHHHCTTEE
T ss_pred CCCccHHHHHHHHh-----ccCCCHHHHHHHHHHHhhcCCceE
Confidence 35688889888876 47777888899844 588899875
No 217
>3pgw_S U1-70K; protein-RNA complex, U1 snRNA, SM fold, SM core, RRM, splici SNRNPS, splicing factors; HET: DNA; 4.40A {Homo sapiens} PDB: 3cw1_K 2l5i_A 2l5j_A*
Probab=21.36 E-value=1.8e+02 Score=26.92 Aligned_cols=59 Identities=14% Similarity=0.219 Sum_probs=39.4
Q ss_pred CcccccccCCCCchHHHHHHHHHHhCCceEEecC---------CccEEEeCCHHHHHHHHHh-CCCccCCC
Q 045796 57 LPLVGYLPFLGTDLYKSLTKLADAYGPIYKFWLA---------NKLFVVVSSSSIAKEMVRD-KDTIFSNR 117 (378)
Q Consensus 57 ~p~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g---------~~~~v~v~dpe~i~~vl~~-~~~~f~~r 117 (378)
.-++|||..-. ....+.++..+||+|..+.+. +.-+|...+++.++.++.. ++..+.++
T Consensus 104 ~lfV~nL~~~~--te~~L~~~F~~~G~I~~v~i~~d~~tg~~kG~aFV~F~~~e~A~~Ai~~lng~~i~gr 172 (437)
T 3pgw_S 104 TLFVARVNYDT--TESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGR 172 (437)
T ss_pred EEEEeCCCCCC--CHHHHHHHHHHcCCeeEEEeeccCCCCCccceEEEeeccHHHHHHHHHHcCCCEECCE
Confidence 34667775431 245677888999999877752 2347888899999999855 44444433
No 218
>3q2s_C Cleavage and polyadenylation specificity factor S; CFIM, CFIM25, CFIM68, CPSF5, CPSF6, CPSF, 3' END processing, processing, cleavage factor; 2.90A {Homo sapiens} PDB: 3q2t_C
Probab=20.92 E-value=1.4e+02 Score=24.75 Aligned_cols=49 Identities=20% Similarity=0.259 Sum_probs=34.6
Q ss_pred ccccccCCCCchHHHHHHHHHHhC--CceEEecCC---------ccEEEeCCHHHHHHHHHh
Q 045796 59 LVGYLPFLGTDLYKSLTKLADAYG--PIYKFWLAN---------KLFVVVSSSSIAKEMVRD 109 (378)
Q Consensus 59 ~lG~~~~l~~~~~~~~~~~~~~yG--~i~~~~~g~---------~~~v~v~dpe~i~~vl~~ 109 (378)
++||+..-. ....+.++..+|| +|..+.+.. .=+|...+.+.++.++..
T Consensus 72 fVgnL~~~~--te~~L~~~F~~~G~~~v~~v~i~~d~~tg~skGfaFV~f~~~~~a~~Ai~~ 131 (229)
T 3q2s_C 72 YIGNLTWWT--TDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALVGVGSEASSKKLMDL 131 (229)
T ss_dssp EEESCCTTC--CHHHHHHHHHTTTCCCEEEEEEEECTTTCCEEEEEEEEESCTTHHHHHHTT
T ss_pred EEeCCCCCC--CHHHHHHHHHHHCCcceEEEEEEecCCCCccceEEEEEECCHHHHHHHHHH
Confidence 556665321 2566888889999 887776521 137888899999999864
No 219
>2dha_A FLJ20171 protein; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.66 E-value=1.1e+02 Score=22.42 Aligned_cols=54 Identities=17% Similarity=0.289 Sum_probs=34.9
Q ss_pred ccccccCCCCchHHHHHHHHHHhCCc----eEEec-----C---CccEEEeCCHHHHHHHHHhCCCcc
Q 045796 59 LVGYLPFLGTDLYKSLTKLADAYGPI----YKFWL-----A---NKLFVVVSSSSIAKEMVRDKDTIF 114 (378)
Q Consensus 59 ~lG~~~~l~~~~~~~~~~~~~~yG~i----~~~~~-----g---~~~~v~v~dpe~i~~vl~~~~~~f 114 (378)
++||+..- .....+.++..+||+| ..+++ | +.-+|-..+++.++..+..+...+
T Consensus 27 ~V~nLp~~--~te~dl~~~F~~~g~v~g~v~~v~i~~d~~gr~~G~aFV~F~~~~~A~~Al~~~~~~l 92 (123)
T 2dha_A 27 RMRGLPFT--ATAEEVVAFFGQHCPITGGKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLL 92 (123)
T ss_dssp EECSCCTT--CCHHHHHHHHHTTSCCTTGGGGEEEEECTTSCEEEEEEECCSSHHHHHHHHTTTTEES
T ss_pred EEeCCCCC--CCHHHHHHHHHhhCCccCCcceEEEEECCCCCEeeEEEEEECCHHHHHHHHHhCCCee
Confidence 45666542 2256788889999975 23332 1 224788889999999997654333
No 220
>3md3_A Nuclear and cytoplasmic polyadenylated RNA-bindin PUB1; RRM, RNP, RBD, poly(U) binding, tandem, acetylation, cytopla nucleus; 2.70A {Saccharomyces cerevisiae}
Probab=20.64 E-value=1.2e+02 Score=22.75 Aligned_cols=46 Identities=22% Similarity=0.161 Sum_probs=32.7
Q ss_pred HHHHHHHHHHhCCceEEecC--------CccEEEeCCHHHHHHHHH-hCCCccCC
Q 045796 71 YKSLTKLADAYGPIYKFWLA--------NKLFVVVSSSSIAKEMVR-DKDTIFSN 116 (378)
Q Consensus 71 ~~~~~~~~~~yG~i~~~~~g--------~~~~v~v~dpe~i~~vl~-~~~~~f~~ 116 (378)
...+.++.++||+|..+++. +.-.|-..+++.++..+. -++..+.+
T Consensus 14 ~~~l~~~f~~~G~i~~v~i~~~~~~~~~g~afV~f~~~~~a~~A~~~l~~~~~~g 68 (166)
T 3md3_A 14 EDILKQYFQVGGPIANIKIMIDKNNKNVNYAFVEYHQSHDANIALQTLNGKQIEN 68 (166)
T ss_dssp HHHHHHHHGGGSCEEEEEEECCCC-CCEEEEEEEESSHHHHHHHHHHHTTCEETT
T ss_pred HHHHHHHHHhcCCeEEEEEEECCCCCCCCEEEEEeCCHHHHHHHHHHcCCCccCC
Confidence 45677888999999877752 234788889999999984 34433433
No 221
>4f02_A Polyadenylate-binding protein 1; mRNA, eukaryotic initiation factors PAIP1 and PAIP2, translation-RNA complex; 2.00A {Homo sapiens} PDB: 1cvj_A*
Probab=20.54 E-value=1.4e+02 Score=24.05 Aligned_cols=55 Identities=18% Similarity=0.109 Sum_probs=37.8
Q ss_pred CCCCcccccccCCCCchHHHHHHHHHHhCCceEEecC---------CccEEEeCCHHHHHHHHHhC
Q 045796 54 PRGLPLVGYLPFLGTDLYKSLTKLADAYGPIYKFWLA---------NKLFVVVSSSSIAKEMVRDK 110 (378)
Q Consensus 54 P~~~p~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g---------~~~~v~v~dpe~i~~vl~~~ 110 (378)
|...=++||+..-. -...+.++..+||+|..+++. +.-+|-..+++.++..+...
T Consensus 14 p~~tlfVgnLp~~~--te~~L~~~F~~~G~I~~v~i~~d~~tg~~~G~afV~F~~~~~A~~Ai~~~ 77 (213)
T 4f02_A 14 PMASLYVGDLHPDV--TEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 77 (213)
T ss_dssp -CCEEEEESCCTTC--CHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHH
T ss_pred CCcEEEEeCCCCCC--CHHHHHHHHHhhCCEEEEEEecccCCCCccccccceeCCHHHHHHHHHHh
Confidence 43344678876421 256678888999999877642 12378889999999998653
No 222
>2khc_A Testis-specific RNP-type RNA binding protein; RRM, RNA recognition motif, bruno; NMR {Drosophila melanogaster}
Probab=20.36 E-value=91 Score=22.28 Aligned_cols=49 Identities=14% Similarity=0.055 Sum_probs=34.0
Q ss_pred ccccccCCCCchHHHHHHHHHHhCCceEEecCC---------ccEEEeCCHHHHHHHHHh
Q 045796 59 LVGYLPFLGTDLYKSLTKLADAYGPIYKFWLAN---------KLFVVVSSSSIAKEMVRD 109 (378)
Q Consensus 59 ~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g~---------~~~v~v~dpe~i~~vl~~ 109 (378)
++||+..- -....+.++..+||+|..+.+.. .-+|-..+++.++.++..
T Consensus 44 ~V~nlp~~--~t~~~l~~~F~~~G~i~~~~i~~~~~~g~~~g~afV~f~~~~~A~~A~~~ 101 (118)
T 2khc_A 44 FIYHLPQE--FTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDNPDSAQVAIKA 101 (118)
T ss_dssp EEECSCTT--CCHHHHHHHTTTSCEEEEEEECCCSSSSCCCCEEEEEEESSHHHHHHHHH
T ss_pred EEeCCCCC--CCHHHHHHHHHhcCCEEEEEEEeCCCCCCcCcEEEEEECCHHHHHHHHHH
Confidence 45665532 12566788888999988877532 236777899999998864
No 223
>2cq1_A PTB-like protein L; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=20.21 E-value=1.7e+02 Score=20.51 Aligned_cols=50 Identities=18% Similarity=0.231 Sum_probs=36.1
Q ss_pred CcccccccCCCCchHHHHHHHHHHhCCceEEecC---CccEEEeCCHHHHHHHHH
Q 045796 57 LPLVGYLPFLGTDLYKSLTKLADAYGPIYKFWLA---NKLFVVVSSSSIAKEMVR 108 (378)
Q Consensus 57 ~p~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g---~~~~v~v~dpe~i~~vl~ 108 (378)
.=++||+..= -....+.++..+||+|..+.+. +.-+|-..+++.++..+.
T Consensus 17 ~l~V~nLp~~--~te~~L~~~F~~fG~v~~v~i~~~kg~aFVef~~~~~A~~Ai~ 69 (101)
T 2cq1_A 17 VLHIRKLPGE--VTETEVIALGLPFGKVTNILMLKGKNQAFLELATEEAAITMVN 69 (101)
T ss_dssp EEEEESCCTT--CCHHHHHHTTTTTSCEEEEEEETTTTEEEEEESSHHHHHHHHH
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhcCCEEEEEEECCCCEEEEEECCHHHHHHHHH
Confidence 3456887642 2255677888999999887753 334788889999988876
No 224
>1wex_A Hypothetical protein (riken cDNA 2810036L13); structural genomics, RRM domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.58.7.1
Probab=20.02 E-value=2.3e+02 Score=19.83 Aligned_cols=50 Identities=20% Similarity=0.141 Sum_probs=36.2
Q ss_pred CcccccccCCCCchHHHHHHHHHHhCCceEEecC---CccEEEeCCHHHHHHHHH
Q 045796 57 LPLVGYLPFLGTDLYKSLTKLADAYGPIYKFWLA---NKLFVVVSSSSIAKEMVR 108 (378)
Q Consensus 57 ~p~lG~~~~l~~~~~~~~~~~~~~yG~i~~~~~g---~~~~v~v~dpe~i~~vl~ 108 (378)
.=++||+..= -....+.++..+||+|..+.+. +.=+|-..+.+.++..+.
T Consensus 17 ~l~V~nLp~~--~te~~L~~~F~~fG~V~~v~i~~~kg~aFVef~~~~~A~~Ai~ 69 (104)
T 1wex_A 17 VVHVRGLCES--VVEADLVEALEKFGTICYVMMMPFKRQALVEFENIDSAKECVT 69 (104)
T ss_dssp EEEEESCCSS--CCHHHHHHHHTTTSCEEEEEEETTTTEEEEEESSHHHHHHHHH
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhCCCEEEEEEECCCCEEEEEECCHHHHHHHHH
Confidence 3456877642 2256688888999999888753 234788889999988875
Done!