Query 045798
Match_columns 1008
No_of_seqs 992 out of 6177
Neff 9.7
Searched_HMMs 29240
Date Mon Mar 25 09:29:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045798.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045798hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 6.5E-81 2.2E-85 772.7 39.4 594 7-608 7-746 (768)
2 3rgz_A Protein brassinosteroid 100.0 5E-63 1.7E-67 612.6 32.0 514 55-581 179-743 (768)
3 1ziw_A TOLL-like receptor 3; i 100.0 1E-58 3.5E-63 569.4 38.0 563 41-606 3-626 (680)
4 4eco_A Uncharacterized protein 100.0 2.8E-58 9.7E-63 556.7 17.5 511 5-582 23-603 (636)
5 3t6q_A CD180 antigen; protein- 100.0 5E-56 1.7E-60 538.2 36.8 514 55-583 34-564 (606)
6 3t6q_A CD180 antigen; protein- 100.0 1E-56 3.4E-61 544.3 29.9 531 59-606 17-564 (606)
7 3j0a_A TOLL-like receptor 5; m 100.0 1.2E-55 4E-60 552.4 34.8 509 78-606 24-564 (844)
8 1ziw_A TOLL-like receptor 3; i 100.0 2.4E-55 8.1E-60 539.6 35.7 523 54-584 49-627 (680)
9 3vq2_A TLR4, TOLL-like recepto 100.0 3.4E-55 1.2E-59 530.9 31.3 527 59-606 16-562 (606)
10 4ecn_A Leucine-rich repeat pro 100.0 3.8E-55 1.3E-59 536.0 26.8 507 5-556 262-864 (876)
11 3j0a_A TOLL-like receptor 5; m 100.0 4.7E-54 1.6E-58 537.9 37.2 521 42-584 14-565 (844)
12 3vq2_A TLR4, TOLL-like recepto 100.0 9.1E-54 3.1E-58 518.4 31.6 507 80-604 13-535 (606)
13 2z81_A CD282 antigen, TOLL-lik 100.0 2E-52 7E-57 500.4 29.6 492 40-559 2-513 (549)
14 2z63_A TOLL-like receptor 4, v 100.0 2.1E-50 7.3E-55 485.4 28.2 503 63-585 16-537 (570)
15 4asz_A BDNF/NT-3 growth factor 100.0 2.9E-51 1E-55 441.9 15.4 269 684-994 13-290 (299)
16 3omv_A RAF proto-oncogene seri 100.0 9.9E-51 3.4E-55 437.3 18.7 262 683-994 35-301 (307)
17 4aoj_A High affinity nerve gro 100.0 1.2E-50 4.2E-55 443.4 19.3 269 684-994 41-320 (329)
18 2z63_A TOLL-like receptor 4, v 100.0 1.3E-49 4.6E-54 478.5 27.6 492 54-562 28-537 (570)
19 4fih_A Serine/threonine-protei 100.0 2E-50 6.9E-55 439.9 17.5 250 684-986 74-323 (346)
20 4b9d_A Serine/threonine-protei 100.0 1.2E-50 3.9E-55 442.6 13.9 252 683-986 23-276 (350)
21 4g3f_A NF-kappa-beta-inducing 100.0 1.7E-50 5.9E-55 439.3 14.3 266 683-1001 57-324 (336)
22 4gt4_A Tyrosine-protein kinase 100.0 2.8E-50 9.5E-55 436.3 15.6 266 685-992 27-305 (308)
23 3hmm_A TGF-beta receptor type- 100.0 3.5E-49 1.2E-53 429.5 21.2 282 684-994 3-298 (303)
24 3fpq_A Serine/threonine-protei 100.0 2.6E-49 9E-54 423.1 18.5 251 687-986 29-282 (290)
25 4aw0_A HPDK1, 3-phosphoinositi 100.0 3.9E-50 1.3E-54 431.0 12.0 249 684-985 32-283 (311)
26 4fie_A Serine/threonine-protei 100.0 3.1E-49 1E-53 441.3 18.3 250 684-986 151-400 (423)
27 2z7x_B TOLL-like receptor 1, v 100.0 4E-49 1.4E-53 468.2 18.7 454 58-583 4-485 (520)
28 3hyh_A Carbon catabolite-derep 100.0 6.2E-49 2.1E-53 416.2 16.9 247 683-986 12-262 (275)
29 2z81_A CD282 antigen, TOLL-lik 100.0 7E-48 2.4E-52 461.0 28.0 483 81-583 8-514 (549)
30 4ase_A Vascular endothelial gr 100.0 7.1E-49 2.4E-53 432.7 16.0 276 679-994 59-348 (353)
31 4g8a_A TOLL-like receptor 4; l 100.0 6E-47 2.1E-51 462.0 31.4 555 31-606 12-584 (635)
32 2z7x_B TOLL-like receptor 1, v 100.0 1.3E-47 4.4E-52 455.2 24.2 460 81-607 3-486 (520)
33 4g31_A Eukaryotic translation 100.0 7.4E-48 2.5E-52 416.4 16.9 259 684-986 5-279 (299)
34 4eco_A Uncharacterized protein 100.0 1.2E-47 4.1E-52 463.8 19.7 506 10-604 25-602 (636)
35 3ubd_A Ribosomal protein S6 ki 100.0 1.6E-48 5.4E-53 418.9 9.1 243 684-981 24-271 (304)
36 4g8a_A TOLL-like receptor 4; l 100.0 4.3E-46 1.5E-50 454.4 28.8 513 54-583 52-584 (635)
37 4ecn_A Leucine-rich repeat pro 100.0 1.2E-46 4E-51 461.0 23.8 450 78-583 323-844 (876)
38 4b99_A Mitogen-activated prote 100.0 3.7E-46 1.3E-50 418.7 19.6 283 683-986 53-344 (398)
39 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 4.8E-46 1.7E-50 445.3 19.9 219 57-284 34-262 (562)
40 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 1.9E-44 6.4E-49 431.5 25.8 463 79-584 32-515 (562)
41 4f9c_A Cell division cycle 7-r 100.0 6E-45 2.1E-49 404.7 18.4 202 681-905 18-249 (361)
42 3v5w_A G-protein coupled recep 100.0 1.7E-43 5.7E-48 411.9 18.8 250 683-986 188-449 (689)
43 3uto_A Twitchin; kinase, muscl 100.0 4.8E-43 1.6E-47 413.6 20.3 253 683-986 156-410 (573)
44 1ogq_A PGIP-2, polygalacturona 100.0 2.5E-42 8.6E-47 379.7 19.7 294 7-306 1-302 (313)
45 3v47_A TOLL-like receptor 5B a 100.0 1.3E-41 4.3E-46 396.7 25.9 392 81-561 13-413 (455)
46 1jl5_A Outer protein YOPM; leu 100.0 1.4E-42 4.9E-47 400.7 17.5 402 74-580 7-410 (454)
47 3v47_A TOLL-like receptor 5B a 100.0 1.3E-41 4.4E-46 396.6 24.6 376 65-464 21-413 (455)
48 2qkw_B Protein kinase; three-h 100.0 1.4E-41 4.6E-46 376.5 21.6 286 674-994 29-316 (321)
49 1jl5_A Outer protein YOPM; leu 100.0 2E-41 6.8E-46 391.1 22.1 421 54-585 11-435 (454)
50 3s95_A LIMK-1, LIM domain kina 100.0 2E-41 6.8E-46 373.3 20.3 267 683-996 9-285 (310)
51 3fxz_A Serine/threonine-protei 100.0 2.8E-41 9.5E-46 369.0 19.5 251 683-986 19-269 (297)
52 3q4u_A Activin receptor type-1 100.0 5E-41 1.7E-45 368.7 21.6 268 683-991 7-300 (301)
53 3uim_A Brassinosteroid insensi 100.0 2.1E-41 7.1E-46 376.2 18.6 288 670-990 16-308 (326)
54 3soc_A Activin receptor type-2 100.0 7.1E-41 2.4E-45 370.5 19.2 285 683-994 23-319 (322)
55 2nru_A Interleukin-1 receptor- 100.0 7.1E-40 2.4E-44 360.5 25.9 284 670-993 11-306 (307)
56 2c30_A Serine/threonine-protei 100.0 3.1E-40 1.1E-44 364.8 21.8 263 672-987 23-295 (321)
57 3fe3_A MAP/microtubule affinit 100.0 7.2E-41 2.5E-45 369.9 16.5 248 683-986 14-264 (328)
58 3p86_A Serine/threonine-protei 100.0 1.3E-40 4.6E-45 365.4 18.4 261 682-994 35-299 (309)
59 3ugc_A Tyrosine-protein kinase 100.0 4.9E-41 1.7E-45 367.4 14.8 280 683-994 9-292 (295)
60 3kul_A Ephrin type-A receptor 100.0 5.1E-41 1.8E-45 371.8 13.9 266 683-998 48-318 (325)
61 3zgw_A Maternal embryonic leuc 100.0 9.8E-41 3.4E-45 370.7 15.9 252 682-987 8-261 (347)
62 3tki_A Serine/threonine-protei 100.0 3.2E-40 1.1E-44 364.9 18.5 254 683-986 6-261 (323)
63 2yab_A Death-associated protei 100.0 6.4E-40 2.2E-44 366.5 21.1 252 683-986 11-272 (361)
64 1tki_A Titin; serine kinase, m 100.0 5.2E-40 1.8E-44 362.6 19.9 252 683-986 4-257 (321)
65 2psq_A Fibroblast growth facto 100.0 3.9E-40 1.4E-44 371.1 19.1 271 683-995 80-366 (370)
66 3lb7_A RAF proto-oncogene seri 100.0 3.3E-40 1.1E-44 362.2 17.2 263 683-995 35-302 (307)
67 1o6l_A RAC-beta serine/threoni 100.0 4.1E-40 1.4E-44 364.7 18.1 249 683-986 4-260 (337)
68 4eqm_A Protein kinase; transfe 100.0 2.9E-40 9.8E-45 360.6 16.1 262 683-993 10-275 (294)
69 2qol_A Ephrin receptor; recept 100.0 2.7E-40 9.1E-45 372.6 15.8 262 683-994 44-310 (373)
70 3vhe_A Vascular endothelial gr 100.0 2.9E-40 1E-44 372.3 16.0 281 674-994 12-356 (359)
71 3bz5_A Internalin-J, INLJ; leu 100.0 5.7E-39 1.9E-43 370.9 27.0 320 69-459 33-352 (457)
72 3cbl_A C-FES, proto-oncogene t 100.0 1.6E-40 5.5E-45 375.8 13.6 261 683-994 113-375 (377)
73 4hcu_A Tyrosine-protein kinase 100.0 8.8E-40 3E-44 352.3 17.8 258 683-994 9-267 (269)
74 2bdw_A Hypothetical protein K1 100.0 1.5E-39 5E-44 365.0 20.0 253 683-987 28-285 (362)
75 2y0a_A Death-associated protei 100.0 1.6E-39 5.4E-44 360.0 20.0 252 683-986 10-271 (326)
76 4euu_A Serine/threonine-protei 100.0 1.4E-39 4.8E-44 360.0 19.5 284 683-990 8-306 (319)
77 3g2f_A Bone morphogenetic prot 100.0 3.5E-40 1.2E-44 368.1 14.6 294 683-1000 12-325 (336)
78 2zv2_A Calcium/calmodulin-depe 100.0 1.4E-39 4.8E-44 356.3 19.0 252 683-986 12-292 (298)
79 3soa_A Calcium/calmodulin-depe 100.0 2E-39 6.9E-44 372.1 20.8 254 682-986 9-267 (444)
80 3h4j_B AMPK kdaid, SNF1-like p 100.0 6.4E-40 2.2E-44 362.8 15.1 247 683-986 8-258 (336)
81 1kob_A Twitchin; kinase, intra 100.0 2.8E-39 9.7E-44 364.6 20.6 253 683-986 50-304 (387)
82 3op5_A Serine/threonine-protei 100.0 7.9E-40 2.7E-44 368.8 16.1 276 683-994 34-330 (364)
83 3o0g_A Cell division protein k 100.0 1.3E-39 4.3E-44 355.6 17.0 276 684-986 2-282 (292)
84 3mdy_A Bone morphogenetic prot 100.0 8.4E-39 2.9E-43 357.1 23.9 277 680-994 33-332 (337)
85 3txo_A PKC-L, NPKC-ETA, protei 100.0 3.9E-40 1.3E-44 367.4 13.0 249 683-986 22-280 (353)
86 3sxs_A Cytoplasmic tyrosine-pr 100.0 5.1E-40 1.8E-44 354.0 13.4 258 683-994 7-265 (268)
87 4dc2_A Protein kinase C IOTA t 100.0 1.3E-39 4.4E-44 367.1 16.4 253 683-981 51-307 (396)
88 3l9p_A Anaplastic lymphoma kin 100.0 5.6E-40 1.9E-44 369.6 13.5 272 683-999 70-351 (367)
89 1csn_A Casein kinase-1; phosph 100.0 3.8E-39 1.3E-43 353.1 19.6 265 683-994 9-284 (298)
90 2izr_A Casein kinase I isoform 100.0 1.9E-39 6.5E-44 360.7 17.3 264 683-994 8-282 (330)
91 4fr4_A YANK1, serine/threonine 100.0 3.6E-39 1.2E-43 362.3 19.6 251 683-986 14-271 (384)
92 4f0f_A Serine/threonine-protei 100.0 2.7E-39 9.2E-44 352.2 18.0 254 683-991 18-287 (287)
93 1fot_A TPK1 delta, CAMP-depend 100.0 2.2E-39 7.5E-44 356.4 17.2 246 683-986 5-258 (318)
94 1k9a_A Carboxyl-terminal SRC k 100.0 2.4E-39 8.2E-44 374.6 18.3 254 683-994 192-446 (450)
95 2w4o_A Calcium/calmodulin-depe 100.0 2.9E-39 1E-43 361.1 17.9 252 682-986 51-305 (349)
96 3ttj_A Mitogen-activated prote 100.0 8.4E-39 2.9E-43 370.3 22.2 282 683-986 61-355 (464)
97 3lxl_A Tyrosine-protein kinase 100.0 9.3E-40 3.2E-44 362.8 13.6 284 683-999 22-309 (327)
98 3c0i_A Peripheral plasma membr 100.0 1.9E-39 6.7E-44 363.1 16.3 256 683-986 23-286 (351)
99 3niz_A Rhodanese family protei 100.0 5.3E-39 1.8E-43 353.5 19.3 278 683-986 20-300 (311)
100 3llt_A Serine/threonine kinase 100.0 3E-39 1E-43 364.0 17.8 211 670-905 21-261 (360)
101 1xjd_A Protein kinase C, theta 100.0 1.1E-39 3.6E-44 362.4 13.8 250 681-985 14-268 (345)
102 3qd2_B Eukaryotic translation 100.0 8.4E-39 2.9E-43 356.3 21.1 260 683-986 5-325 (332)
103 2eva_A TAK1 kinase - TAB1 chim 100.0 3.7E-39 1.3E-43 354.2 17.7 258 683-995 7-265 (307)
104 3g33_A Cell division protein k 100.0 2.3E-39 7.9E-44 356.5 16.1 282 682-986 7-296 (308)
105 3gxj_A TGF-beta receptor type- 100.0 8.6E-41 2.9E-45 367.2 4.6 270 683-993 2-297 (303)
106 3hko_A Calcium/calmodulin-depe 100.0 3.9E-39 1.3E-43 361.0 18.2 271 679-986 21-330 (345)
107 1b6c_B TGF-B superfamily recep 100.0 1.5E-38 5.1E-43 355.8 22.8 275 679-994 37-337 (342)
108 3f66_A Hepatocyte growth facto 100.0 6.1E-39 2.1E-43 351.4 19.1 264 683-994 24-292 (298)
109 3dtc_A Mitogen-activated prote 100.0 1.9E-39 6.6E-44 350.1 14.9 254 683-991 6-271 (271)
110 1mp8_A Focal adhesion kinase 1 100.0 2.4E-39 8.2E-44 351.2 15.6 260 683-995 14-278 (281)
111 4fvq_A Tyrosine-protein kinase 100.0 8E-40 2.7E-44 356.8 11.8 253 683-993 7-275 (289)
112 3og7_A AKAP9-BRAF fusion prote 100.0 2.9E-39 1E-43 352.0 16.2 260 683-992 23-287 (289)
113 3gen_A Tyrosine-protein kinase 100.0 4.3E-39 1.5E-43 349.8 17.4 259 682-994 22-281 (283)
114 3v8s_A RHO-associated protein 100.0 1.2E-39 4.1E-44 369.5 13.3 259 677-986 62-329 (410)
115 3bz5_A Internalin-J, INLJ; leu 100.0 3.4E-38 1.1E-42 364.5 25.6 374 80-585 20-393 (457)
116 3poz_A Epidermal growth factor 100.0 1.5E-39 5.2E-44 360.7 13.8 260 683-994 14-279 (327)
117 3kfa_A Tyrosine-protein kinase 100.0 4.2E-39 1.4E-43 350.9 17.1 263 682-996 11-274 (288)
118 3uc3_A Serine/threonine-protei 100.0 2.5E-39 8.6E-44 363.2 15.7 254 683-987 19-275 (361)
119 3c1x_A Hepatocyte growth facto 100.0 3.3E-39 1.1E-43 363.1 16.6 262 685-994 90-356 (373)
120 3ork_A Serine/threonine protei 100.0 1.3E-39 4.6E-44 358.6 13.1 265 683-991 11-279 (311)
121 3gni_B Strad alpha; kinase fol 100.0 5.8E-39 2E-43 365.4 18.7 287 683-987 24-334 (389)
122 3rp9_A Mitogen-activated prote 100.0 5.2E-39 1.8E-43 373.9 18.6 204 683-900 52-281 (458)
123 3pls_A Macrophage-stimulating 100.0 1.3E-38 4.3E-43 349.0 20.5 263 685-994 22-288 (298)
124 1rdq_E PKA C-alpha, CAMP-depen 100.0 3.3E-39 1.1E-43 359.8 16.1 246 683-986 40-293 (350)
125 2ivs_A Proto-oncogene tyrosine 100.0 5.7E-39 1.9E-43 354.6 17.7 269 683-993 22-311 (314)
126 2pmi_A Negative RE, cyclin-dep 100.0 3E-39 1E-43 356.7 15.4 284 683-986 4-293 (317)
127 3a8x_A Protein kinase C IOTA t 100.0 7.1E-39 2.4E-43 356.6 18.5 253 683-981 8-264 (345)
128 3qup_A Tyrosine-protein kinase 100.0 3E-39 1E-43 358.2 15.2 273 682-995 21-300 (323)
129 4eut_A Serine/threonine-protei 100.0 3.6E-39 1.2E-43 367.3 16.1 287 683-993 8-309 (396)
130 3kmu_A ILK, integrin-linked ki 100.0 3.8E-39 1.3E-43 347.9 15.4 255 683-993 9-270 (271)
131 1rjb_A FL cytokine receptor; k 100.0 4.3E-39 1.5E-43 360.4 16.3 273 682-995 43-336 (344)
132 4aw2_A Serine/threonine-protei 100.0 1.5E-39 5.2E-44 371.5 12.8 263 676-986 66-338 (437)
133 3f3z_A Calcium/calmodulin-depe 100.0 9.6E-39 3.3E-43 345.8 18.3 251 683-986 8-261 (277)
134 1t46_A HOMO sapiens V-KIT hard 100.0 6E-39 2.1E-43 354.3 17.0 271 683-994 22-308 (313)
135 2i0e_A Protein kinase C-beta I 100.0 4E-39 1.4E-43 359.0 15.6 250 682-986 18-276 (353)
136 3cc6_A Protein tyrosine kinase 100.0 4.9E-39 1.7E-43 348.9 15.9 264 683-999 11-279 (281)
137 1luf_A Muscle-specific tyrosin 100.0 3.6E-39 1.2E-43 361.1 15.1 272 682-995 45-337 (343)
138 3tt0_A Basic fibroblast growth 100.0 1.1E-38 3.8E-43 361.6 19.2 271 683-995 68-354 (382)
139 4e5w_A Tyrosine-protein kinase 100.0 3.7E-39 1.3E-43 353.9 14.6 277 683-992 20-301 (302)
140 2x4f_A Myosin light chain kina 100.0 9.4E-39 3.2E-43 359.7 18.2 247 689-986 94-342 (373)
141 3kk8_A Calcium/calmodulin depe 100.0 1.5E-38 5E-43 345.8 19.1 252 683-986 5-261 (284)
142 3lxp_A Non-receptor tyrosine-p 100.0 5.2E-39 1.8E-43 355.0 15.8 278 686-998 33-315 (318)
143 4hgt_A Casein kinase I isoform 100.0 1.7E-38 5.7E-43 347.7 19.6 268 682-995 7-282 (296)
144 3uzp_A CKI-delta, CKID, casein 100.0 2.4E-38 8.2E-43 346.4 20.9 267 683-995 8-282 (296)
145 3n9x_A Phosphotransferase; mal 100.0 1.6E-38 5.5E-43 365.9 20.0 208 683-904 25-253 (432)
146 2a2a_A Death-associated protei 100.0 2E-38 6.9E-43 350.9 20.0 252 683-986 11-272 (321)
147 1opk_A P150, C-ABL, proto-onco 100.0 2.1E-39 7.2E-44 379.2 12.8 258 683-992 219-477 (495)
148 2yex_A Serine/threonine-protei 100.0 2.4E-38 8.2E-43 342.6 20.2 254 683-986 6-261 (276)
149 4agu_A Cyclin-dependent kinase 100.0 6.8E-39 2.3E-43 353.4 15.7 277 683-986 2-284 (311)
150 3kex_A Receptor tyrosine-prote 100.0 7.3E-39 2.5E-43 355.0 15.9 260 683-994 12-277 (325)
151 2y94_A 5'-AMP-activated protei 100.0 1E-38 3.4E-43 368.4 17.5 248 683-986 15-266 (476)
152 3i6u_A CDS1, serine/threonine- 100.0 2.8E-38 9.4E-43 362.1 21.0 253 682-986 133-399 (419)
153 3fdn_A Serine/threonine-protei 100.0 7.9E-39 2.7E-43 346.9 15.6 249 682-987 7-258 (279)
154 3kn6_A Ribosomal protein S6 ki 100.0 8.1E-39 2.8E-43 354.0 15.9 251 689-986 16-270 (325)
155 3brb_A Proto-oncogene tyrosine 100.0 1.5E-38 5.3E-43 350.8 18.1 275 681-996 31-311 (313)
156 2xir_A Vascular endothelial gr 100.0 7.5E-39 2.6E-43 354.0 15.6 281 675-995 18-312 (316)
157 2v62_A Serine/threonine-protei 100.0 4.4E-39 1.5E-43 359.9 13.8 270 683-992 36-327 (345)
158 3oz6_A Mitogen-activated prote 100.0 1.1E-38 3.6E-43 362.9 16.9 207 682-906 7-234 (388)
159 1qcf_A Haematopoetic cell kina 100.0 2.8E-39 9.6E-44 374.7 12.3 257 682-992 186-443 (454)
160 3dls_A PAS domain-containing s 100.0 5.4E-39 1.9E-43 356.8 14.1 243 683-987 23-275 (335)
161 2eue_A Carbon catabolite derep 100.0 9.4E-39 3.2E-43 345.5 15.5 247 683-986 12-262 (275)
162 2w1i_A JAK2; chromosomal rearr 100.0 1E-38 3.5E-43 354.1 16.2 281 683-995 40-324 (326)
163 2buj_A Serine/threonine-protei 100.0 8.9E-39 3.1E-43 353.5 15.6 270 683-992 28-305 (317)
164 1nxk_A MAP kinase-activated pr 100.0 2E-38 6.7E-43 360.7 18.8 256 683-987 60-322 (400)
165 1ob3_A PFPK5, cell division co 100.0 1.2E-38 4.1E-43 346.9 16.4 274 684-986 2-280 (288)
166 1mqb_A Ephrin type-A receptor 100.0 6.8E-39 2.3E-43 356.2 14.6 267 684-1000 44-316 (333)
167 2h34_A Serine/threonine-protei 100.0 1.5E-38 5.3E-43 349.7 17.2 263 682-995 32-298 (309)
168 3t9t_A Tyrosine-protein kinase 100.0 1.6E-38 5.4E-43 342.2 16.9 257 683-993 7-264 (267)
169 3qyz_A Mitogen-activated prote 100.0 2.4E-38 8.3E-43 356.6 19.0 282 682-986 25-313 (364)
170 2vd5_A DMPK protein; serine/th 100.0 7.3E-39 2.5E-43 363.3 14.6 262 676-986 53-327 (412)
171 2wqm_A Serine/threonine-protei 100.0 1.4E-38 4.9E-43 350.6 16.2 266 683-996 31-300 (310)
172 3lzb_A Epidermal growth factor 100.0 8.6E-39 2.9E-43 354.3 14.3 260 683-994 14-279 (327)
173 2r5t_A Serine/threonine-protei 100.0 5.9E-39 2E-43 360.1 13.0 251 683-988 37-291 (373)
174 2i1m_A Macrophage colony-stimu 100.0 1.5E-38 5.2E-43 354.2 16.3 276 680-996 42-329 (333)
175 3a62_A Ribosomal protein S6 ki 100.0 1.6E-38 5.4E-43 352.2 16.2 249 683-986 16-276 (327)
176 2ac3_A MAP kinase-interacting 100.0 1.3E-38 4.5E-43 352.0 15.4 272 683-986 11-295 (316)
177 2pvf_A Fibroblast growth facto 100.0 2.7E-38 9.3E-43 352.0 18.1 272 683-996 34-321 (334)
178 1t4h_A Serine/threonine-protei 100.0 4E-38 1.4E-42 343.4 19.0 252 684-986 26-282 (290)
179 2jam_A Calcium/calmodulin-depe 100.0 2.6E-38 9E-43 347.3 17.6 251 683-986 8-261 (304)
180 1xbb_A Tyrosine-protein kinase 100.0 9.9E-39 3.4E-43 348.3 13.9 263 682-996 14-282 (291)
181 1byg_A CSK, protein (C-termina 100.0 1.4E-38 4.9E-43 344.6 15.1 254 683-994 20-274 (278)
182 3lm5_A Serine/threonine-protei 100.0 3.1E-38 1.1E-42 350.1 18.0 266 671-986 15-287 (327)
183 3gbz_A Kinase, CMGC CDK; ssgci 100.0 6.6E-39 2.3E-43 355.9 12.4 278 680-986 30-318 (329)
184 1cm8_A Phosphorylated MAP kina 100.0 2.3E-38 8E-43 356.2 17.0 278 683-986 24-307 (367)
185 3nsz_A CK II alpha, casein kin 100.0 3.3E-38 1.1E-42 351.0 18.0 277 683-986 35-319 (330)
186 3p1a_A MYT1 kinase, membrane-a 100.0 2.4E-38 8.3E-43 348.3 16.7 245 684-986 57-304 (311)
187 3cok_A Serine/threonine-protei 100.0 1.8E-38 6.1E-43 343.9 15.1 250 683-986 10-262 (278)
188 3mi9_A Cell division protein k 100.0 2.6E-38 8.8E-43 355.0 16.6 284 683-986 16-311 (351)
189 2acx_A G protein-coupled recep 100.0 2.6E-38 8.7E-43 369.1 17.0 254 683-986 183-444 (576)
190 3eqc_A Dual specificity mitoge 100.0 1.1E-38 3.8E-43 359.3 13.6 200 683-905 32-232 (360)
191 1u5q_A Serine/threonine protei 100.0 1.7E-38 5.7E-43 354.4 14.8 247 684-987 54-306 (348)
192 1u59_A Tyrosine-protein kinase 100.0 4.7E-38 1.6E-42 342.2 17.9 263 683-996 8-275 (287)
193 3bhy_A Death-associated protei 100.0 5.8E-38 2E-42 340.9 18.6 256 684-991 5-272 (283)
194 4ejn_A RAC-alpha serine/threon 100.0 8E-39 2.7E-43 370.5 12.4 249 683-986 147-404 (446)
195 1qpc_A LCK kinase; alpha beta 100.0 3E-38 1E-42 342.3 16.0 259 683-995 12-271 (279)
196 2qr7_A Ribosomal protein S6 ki 100.0 1.5E-38 5E-43 353.6 13.7 252 683-986 21-277 (342)
197 2fst_X Mitogen-activated prote 100.0 2.6E-38 9E-43 355.2 15.8 278 683-986 28-311 (367)
198 1o6v_A Internalin A; bacterial 100.0 9.1E-37 3.1E-41 355.8 29.4 345 77-460 45-389 (466)
199 3ll6_A Cyclin G-associated kin 100.0 3.5E-38 1.2E-42 352.1 16.6 267 682-994 26-309 (337)
200 2a19_B Interferon-induced, dou 100.0 1.3E-38 4.6E-43 346.2 12.8 258 683-997 10-278 (284)
201 1o6v_A Internalin A; bacterial 100.0 6.3E-37 2.2E-41 357.1 27.7 347 99-533 43-389 (466)
202 3mtl_A Cell division protein k 100.0 1E-38 3.6E-43 353.5 11.9 278 684-986 2-281 (324)
203 2y7j_A Phosphorylase B kinase 100.0 8.1E-38 2.8E-42 351.7 19.3 257 678-986 88-359 (365)
204 2xrw_A Mitogen-activated prote 100.0 1.4E-37 4.6E-42 351.2 21.1 282 683-987 24-319 (371)
205 3is5_A Calcium-dependent prote 100.0 3.9E-38 1.3E-42 342.2 15.9 254 683-986 21-278 (285)
206 2jii_A Serine/threonine-protei 100.0 1.7E-38 5.8E-43 356.3 13.4 274 683-995 41-338 (352)
207 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 1.1E-38 3.8E-43 369.2 12.2 256 683-992 183-439 (452)
208 2vgo_A Serine/threonine-protei 100.0 4E-38 1.4E-42 342.2 15.6 247 683-986 13-262 (284)
209 1p4o_A Insulin-like growth fac 100.0 4.9E-39 1.7E-43 356.4 8.5 276 676-993 17-299 (322)
210 3dbq_A Dual specificity protei 100.0 2.2E-38 7.7E-43 353.8 13.7 252 683-987 8-274 (343)
211 3byv_A Rhoptry kinase; malaria 100.0 5.3E-39 1.8E-43 363.7 8.5 261 683-995 72-370 (377)
212 2rku_A Serine/threonine-protei 100.0 4.7E-38 1.6E-42 343.6 15.6 250 683-987 14-266 (294)
213 3mwu_A Calmodulin-domain prote 100.0 9.3E-38 3.2E-42 365.8 19.2 251 683-986 21-276 (486)
214 4aaa_A Cyclin-dependent kinase 100.0 1.9E-38 6.4E-43 352.8 12.1 279 683-987 24-307 (331)
215 3c4z_A Rhodopsin kinase; Ser/T 100.0 9.5E-38 3.3E-42 363.9 18.6 252 683-981 184-438 (543)
216 2owb_A Serine/threonine-protei 100.0 4.7E-38 1.6E-42 350.0 15.2 249 683-986 40-291 (335)
217 2clq_A Mitogen-activated prote 100.0 1.2E-37 4E-42 340.7 18.2 254 684-986 22-278 (295)
218 3pg1_A Mitogen-activated prote 100.0 8E-38 2.8E-42 352.6 17.2 280 676-986 14-316 (362)
219 3nyv_A Calmodulin-domain prote 100.0 6E-38 2.1E-42 367.6 16.8 251 683-986 25-281 (484)
220 2yfx_A Tyrosine-protein kinase 100.0 4E-38 1.4E-42 349.7 14.4 272 683-999 29-310 (327)
221 3sv0_A Casein kinase I-like; t 100.0 1.6E-37 5.6E-42 359.0 19.8 268 683-994 6-279 (483)
222 2zmd_A Dual specificity protei 100.0 5E-38 1.7E-42 356.3 15.2 251 684-987 56-321 (390)
223 3lij_A Calcium/calmodulin depe 100.0 1.1E-37 3.8E-42 365.7 18.3 251 683-986 36-291 (494)
224 3e7e_A HBUB1, BUB1A, mitotic c 100.0 8.9E-38 3E-42 352.3 16.7 258 682-994 63-340 (365)
225 3a7i_A MST3 kinase, serine/thr 100.0 1.9E-37 6.3E-42 340.5 18.8 250 683-987 21-271 (303)
226 2ozo_A Tyrosine-protein kinase 100.0 1.5E-37 5E-42 372.1 19.3 259 685-994 336-599 (613)
227 2w5a_A Serine/threonine-protei 100.0 2.9E-38 1E-42 342.5 12.1 258 683-988 5-269 (279)
228 1fvr_A Tyrosine-protein kinase 100.0 5.4E-38 1.8E-42 348.6 14.4 266 684-994 25-301 (327)
229 2b9h_A MAP kinase FUS3, mitoge 100.0 1.2E-37 4E-42 350.2 17.2 286 683-986 10-305 (353)
230 1ua2_A CAK, cell division prot 100.0 1E-37 3.5E-42 348.9 16.6 280 680-986 6-291 (346)
231 2ycf_A Serine/threonine-protei 100.0 1.9E-37 6.4E-42 343.4 18.5 252 683-986 9-274 (322)
232 3kvw_A DYRK2, dual specificity 100.0 1.8E-37 6.3E-42 356.1 18.9 199 683-906 96-302 (429)
233 3q5i_A Protein kinase; CDPK, m 100.0 1.9E-37 6.5E-42 364.6 19.4 251 683-986 35-301 (504)
234 2h6d_A 5'-AMP-activated protei 100.0 1.1E-37 3.9E-42 337.3 15.6 248 683-986 10-261 (276)
235 2x7f_A TRAF2 and NCK-interacti 100.0 4.3E-38 1.5E-42 349.5 12.4 267 673-986 13-286 (326)
236 2j7t_A Serine/threonine-protei 100.0 7E-38 2.4E-42 343.8 13.8 253 683-986 18-275 (302)
237 1phk_A Phosphorylase kinase; g 100.0 2.7E-37 9.2E-42 338.4 18.3 254 681-986 14-283 (298)
238 4fl3_A Tyrosine-protein kinase 100.0 1.3E-37 4.3E-42 373.3 16.7 253 690-994 375-632 (635)
239 1x8b_A WEE1HU, WEE1-like prote 100.0 2E-37 6.8E-42 337.8 16.2 247 683-986 10-279 (289)
240 2i6l_A Mitogen-activated prote 100.0 2.7E-37 9.3E-42 342.2 17.4 285 683-986 10-305 (320)
241 3eb0_A Putative uncharacterize 100.0 1.7E-37 5.7E-42 352.2 15.8 289 680-993 3-330 (383)
242 1z57_A Dual specificity protei 100.0 5.2E-37 1.8E-41 342.9 19.5 278 683-986 13-328 (339)
243 4exu_A Mitogen-activated prote 100.0 3.4E-37 1.1E-41 347.9 18.0 277 683-986 41-323 (371)
244 2r3i_A Cell division protein k 100.0 3.1E-37 1.1E-41 338.1 17.0 276 683-986 2-283 (299)
245 3com_A Serine/threonine-protei 100.0 3.2E-37 1.1E-41 340.5 17.0 252 682-986 27-278 (314)
246 2h8h_A Proto-oncogene tyrosine 100.0 4.2E-38 1.4E-42 371.6 10.4 256 683-992 266-522 (535)
247 2vwi_A Serine/threonine-protei 100.0 5.6E-38 1.9E-42 344.8 10.3 271 682-986 13-287 (303)
248 1vzo_A Ribosomal protein S6 ki 100.0 1.3E-37 4.6E-42 348.7 13.4 255 683-987 53-322 (355)
249 3pfq_A PKC-B, PKC-beta, protei 100.0 2.3E-37 7.8E-42 373.7 16.3 245 682-981 339-587 (674)
250 3an0_A Dual specificity mitoge 100.0 3.1E-37 1.1E-41 344.6 15.9 255 683-986 50-310 (340)
251 1wak_A Serine/threonine-protei 100.0 8.6E-37 2.9E-41 349.2 19.7 284 683-986 36-391 (397)
252 1blx_A Cyclin-dependent kinase 100.0 5.1E-37 1.8E-41 340.9 17.4 282 682-986 9-296 (326)
253 2wtk_C Serine/threonine-protei 100.0 8.1E-37 2.8E-41 335.8 18.8 255 683-987 4-264 (305)
254 1u46_A ACK-1, activated CDC42 100.0 8E-38 2.7E-42 341.3 10.4 262 683-994 17-285 (291)
255 3fme_A Dual specificity mitoge 100.0 2.1E-37 7.2E-42 337.8 13.5 255 683-986 6-266 (290)
256 3e3p_A Protein kinase, putativ 100.0 6.1E-37 2.1E-41 345.3 17.5 291 676-986 15-314 (360)
257 3q60_A ROP5B; pseudokinase, tr 100.0 6.4E-38 2.2E-42 354.2 9.4 267 683-993 61-361 (371)
258 2pml_X PFPK7, Ser/Thr protein 100.0 1.1E-36 3.7E-41 341.6 19.3 265 683-986 30-322 (348)
259 2wei_A Calmodulin-domain prote 100.0 8E-37 2.7E-41 332.5 17.5 252 682-986 20-276 (287)
260 3oja_B Anopheles plasmodium-re 100.0 4.4E-36 1.5E-40 360.8 25.3 176 28-211 5-184 (597)
261 3coi_A Mitogen-activated prote 100.0 1.3E-36 4.4E-41 341.3 18.8 277 683-986 23-305 (353)
262 2vx3_A Dual specificity tyrosi 100.0 1.1E-36 3.8E-41 345.3 18.0 202 682-906 52-261 (382)
263 2id5_A Lingo-1, leucine rich r 100.0 2.6E-36 9.1E-41 353.7 21.8 320 226-581 15-335 (477)
264 1zy4_A Serine/threonine-protei 100.0 7.6E-37 2.6E-41 335.7 15.3 260 683-986 5-283 (303)
265 2eu9_A Dual specificity protei 100.0 2E-36 6.8E-41 340.5 19.0 278 683-986 18-333 (355)
266 1j1b_A Glycogen synthase kinas 100.0 4E-37 1.4E-41 352.6 13.2 279 683-986 53-336 (420)
267 2id5_A Lingo-1, leucine rich r 100.0 8.9E-36 3E-40 349.2 24.3 315 62-436 19-334 (477)
268 4e7w_A Glycogen synthase kinas 100.0 4.8E-37 1.6E-41 349.0 13.1 278 683-986 39-321 (394)
269 2j0j_A Focal adhesion kinase 1 100.0 1E-36 3.6E-41 366.8 16.0 260 683-995 389-653 (656)
270 3qa8_A MGC80376 protein; kinas 100.0 8.1E-37 2.8E-41 359.3 14.4 278 683-985 13-296 (676)
271 3rgf_A Cyclin-dependent kinase 100.0 1.3E-36 4.5E-41 347.6 15.7 212 684-906 20-239 (405)
272 3o6n_A APL1; leucine-rich repe 100.0 9.8E-36 3.3E-40 339.0 22.8 350 32-460 3-353 (390)
273 3fhr_A MAP kinase-activated pr 100.0 1.2E-36 4.2E-41 338.3 14.4 257 683-986 27-287 (336)
274 3cek_A Dual specificity protei 100.0 4.3E-37 1.5E-41 339.2 10.6 263 672-987 16-293 (313)
275 2iwi_A Serine/threonine-protei 100.0 7.6E-37 2.6E-41 337.1 11.8 246 678-986 25-283 (312)
276 2y4i_B KSR2, HKSR2, kinase sup 100.0 3.6E-37 1.2E-41 341.0 9.1 265 681-997 30-306 (319)
277 3a99_A Proto-oncogene serine/t 100.0 5.9E-37 2E-41 338.7 9.8 242 682-986 41-293 (320)
278 1q8y_A SR protein kinase; tran 100.0 1.6E-36 5.4E-41 343.8 13.6 283 683-986 18-333 (373)
279 2rio_A Serine/threonine-protei 100.0 3.7E-36 1.3E-40 346.1 15.6 259 684-986 15-295 (434)
280 3aln_A Dual specificity mitoge 100.0 2.8E-36 9.5E-41 334.9 13.7 259 683-986 21-285 (327)
281 4fcg_A Uncharacterized protein 100.0 3.6E-35 1.2E-39 324.5 17.7 275 4-284 19-314 (328)
282 2dyl_A Dual specificity mitoge 100.0 1.2E-35 3.9E-40 328.7 13.3 252 683-986 24-283 (318)
283 3dzo_A Rhoptry kinase domain; 100.0 1.4E-35 4.9E-40 338.9 13.9 268 683-1002 77-381 (413)
284 3uqc_A Probable conserved tran 100.0 5.3E-35 1.8E-39 316.7 16.2 236 683-996 30-268 (286)
285 3p23_A Serine/threonine-protei 100.0 2.7E-35 9.2E-40 337.6 14.1 251 683-986 23-283 (432)
286 2pzi_A Probable serine/threoni 100.0 9.7E-35 3.3E-39 353.8 19.6 249 683-995 79-330 (681)
287 1ogq_A PGIP-2, polygalacturona 100.0 4.8E-35 1.6E-39 321.6 14.4 256 325-608 50-310 (313)
288 3o6n_A APL1; leucine-rich repe 100.0 4.2E-34 1.4E-38 325.5 21.2 265 125-459 44-308 (390)
289 3m2w_A MAP kinase-activated pr 100.0 3.1E-34 1E-38 313.9 14.9 236 683-986 16-256 (299)
290 3oja_B Anopheles plasmodium-re 100.0 1.4E-33 4.9E-38 338.9 19.7 136 125-285 50-185 (597)
291 4fmz_A Internalin; leucine ric 100.0 7.1E-33 2.4E-37 310.3 23.6 307 74-435 40-346 (347)
292 4fmz_A Internalin; leucine ric 100.0 2.6E-32 8.8E-37 305.7 24.7 308 97-459 39-346 (347)
293 2vuw_A Serine/threonine-protei 100.0 5.3E-34 1.8E-38 317.6 10.2 196 683-904 19-278 (336)
294 2ft3_A Biglycan; proteoglycan, 100.0 3.5E-31 1.2E-35 294.2 26.2 293 79-432 34-330 (332)
295 1xku_A Decorin; proteoglycan, 100.0 3E-31 1E-35 294.6 23.7 289 223-554 32-330 (330)
296 1z7x_W Ribonuclease inhibitor; 100.0 4.4E-35 1.5E-39 342.1 -8.1 386 174-582 3-443 (461)
297 1xku_A Decorin; proteoglycan, 100.0 4.3E-31 1.5E-35 293.3 24.1 179 103-288 53-233 (330)
298 2ft3_A Biglycan; proteoglycan, 100.0 2.4E-31 8.2E-36 295.5 22.0 288 151-457 34-331 (332)
299 1z7x_W Ribonuclease inhibitor; 100.0 4.8E-35 1.7E-39 341.7 -11.9 356 79-436 4-412 (461)
300 2z80_A TOLL-like receptor 2, v 100.0 1.8E-30 6.2E-35 291.1 16.5 261 33-308 21-290 (353)
301 2z66_A Variable lymphocyte rec 100.0 3.3E-29 1.1E-33 274.9 17.0 240 38-294 3-246 (306)
302 3ogk_B Coronatine-insensitive 100.0 1.3E-31 4.3E-36 323.4 -2.7 435 41-558 41-528 (592)
303 4fcg_A Uncharacterized protein 100.0 1E-30 3.5E-35 288.8 2.3 277 26-309 26-315 (328)
304 2z66_A Variable lymphocyte rec 100.0 1.2E-28 4.2E-33 270.4 16.4 250 225-533 10-262 (306)
305 3ogk_B Coronatine-insensitive 100.0 2.1E-31 7.3E-36 321.4 -8.0 398 54-460 73-527 (592)
306 3g06_A SSPH2 (leucine-rich rep 100.0 2.3E-28 7.8E-33 290.1 16.6 292 31-422 11-308 (622)
307 1wwl_A Monocyte differentiatio 100.0 4.9E-30 1.7E-34 281.9 1.9 248 76-339 41-310 (312)
308 2z80_A TOLL-like receptor 2, v 100.0 1.3E-27 4.4E-32 267.8 19.2 284 125-463 30-318 (353)
309 1ozn_A Reticulon 4 receptor; N 99.9 5.7E-28 1.9E-32 262.1 15.3 253 328-585 14-267 (285)
310 1wwl_A Monocyte differentiatio 99.9 4.5E-29 1.5E-33 274.2 6.1 254 290-581 38-311 (312)
311 3zyi_A Leucine-rich repeat-con 99.9 1.7E-27 5.8E-32 276.3 19.6 238 62-305 62-300 (452)
312 3o53_A Protein LRIM1, AGAP0063 99.9 1.3E-28 4.3E-33 271.3 6.6 257 224-551 12-270 (317)
313 3zyi_A Leucine-rich repeat-con 99.9 2.5E-27 8.5E-32 274.9 17.7 249 327-581 56-305 (452)
314 3zyj_A Leucine-rich repeat-con 99.9 7.4E-27 2.5E-31 269.9 20.7 243 59-307 48-291 (440)
315 3oja_A Leucine-rich immune mol 99.9 2.5E-29 8.5E-34 293.0 -0.0 217 351-604 35-252 (487)
316 1ozn_A Reticulon 4 receptor; N 99.9 3.4E-27 1.2E-31 255.9 16.6 221 57-281 14-235 (285)
317 3zyj_A Leucine-rich repeat-con 99.9 9.3E-27 3.2E-31 269.1 21.1 225 80-310 45-270 (440)
318 3g06_A SSPH2 (leucine-rich rep 99.9 2.4E-26 8.3E-31 272.7 24.3 141 375-561 162-302 (622)
319 2o6q_A Variable lymphocyte rec 99.9 2.2E-26 7.7E-31 247.1 18.7 217 39-260 2-218 (270)
320 4azs_A Methyltransferase WBDD; 99.9 3.6E-28 1.2E-32 286.8 3.1 185 692-902 242-437 (569)
321 3o53_A Protein LRIM1, AGAP0063 99.9 9.3E-28 3.2E-32 264.3 5.8 248 323-585 32-282 (317)
322 3oja_A Leucine-rich immune mol 99.9 8.3E-27 2.8E-31 271.7 8.3 237 323-574 32-270 (487)
323 2p1m_B Transport inhibitor res 99.9 9.2E-29 3.2E-33 298.5 -9.2 442 81-577 46-542 (594)
324 2p1m_B Transport inhibitor res 99.9 6.9E-29 2.4E-33 299.6 -13.4 451 40-532 33-544 (594)
325 2z62_A TOLL-like receptor 4, v 99.9 1.7E-24 5.9E-29 233.4 17.1 213 69-285 21-238 (276)
326 2z62_A TOLL-like receptor 4, v 99.9 3E-24 1E-28 231.6 18.8 228 329-585 11-243 (276)
327 3rfs_A Internalin B, repeat mo 99.9 9.4E-25 3.2E-29 234.6 11.7 200 351-585 42-241 (272)
328 3m19_A Variable lymphocyte rec 99.9 5.8E-24 2E-28 225.5 15.6 192 40-237 3-194 (251)
329 2o6q_A Variable lymphocyte rec 99.9 2.2E-23 7.6E-28 223.7 20.3 202 79-284 17-218 (270)
330 1p9a_G Platelet glycoprotein I 99.9 1.2E-23 4E-28 227.7 18.0 203 74-284 6-208 (290)
331 3en9_A Glycoprotease, O-sialog 99.9 7.5E-25 2.6E-29 257.1 8.0 192 683-904 335-539 (540)
332 4glp_A Monocyte differentiatio 99.9 9.1E-24 3.1E-28 231.7 14.3 229 325-580 64-308 (310)
333 1p9a_G Platelet glycoprotein I 99.9 1.5E-23 5.1E-28 226.9 15.6 204 321-557 6-209 (290)
334 3rfs_A Internalin B, repeat mo 99.9 2E-23 6.8E-28 224.2 15.9 211 74-296 37-247 (272)
335 2xwt_C Thyrotropin receptor; s 99.9 2.5E-23 8.7E-28 218.9 15.6 203 69-281 25-236 (239)
336 3goz_A Leucine-rich repeat-con 99.9 1.4E-24 4.8E-29 243.7 5.0 122 375-514 168-303 (362)
337 3m19_A Variable lymphocyte rec 99.9 4.8E-23 1.6E-27 218.4 15.3 179 352-558 16-194 (251)
338 2xwt_C Thyrotropin receptor; s 99.9 1.1E-22 3.9E-27 213.9 14.2 214 38-258 6-237 (239)
339 2ca6_A RAN GTPase-activating p 99.9 1.4E-24 4.8E-29 246.4 -1.5 142 398-560 159-320 (386)
340 3goz_A Leucine-rich repeat-con 99.9 3E-24 1E-28 241.0 1.2 267 59-348 3-307 (362)
341 4glp_A Monocyte differentiatio 99.9 1.1E-22 3.7E-27 223.1 12.5 226 78-309 64-308 (310)
342 1h6u_A Internalin H; cell adhe 99.9 1.6E-22 5.6E-27 221.0 12.7 194 322-557 38-231 (308)
343 2ast_B S-phase kinase-associat 99.9 8.3E-24 2.9E-28 235.4 2.5 271 39-372 34-315 (336)
344 2ca6_A RAN GTPase-activating p 99.9 3.5E-24 1.2E-28 243.1 -1.8 246 317-583 24-320 (386)
345 4ay9_X Follicle-stimulating ho 99.9 7.1E-22 2.4E-26 220.4 15.6 205 40-261 7-216 (350)
346 2ast_B S-phase kinase-associat 99.9 5.8E-23 2E-27 228.5 6.5 251 326-585 48-312 (336)
347 1zar_A RIO2 kinase; serine kin 99.9 2.7E-22 9.2E-27 215.4 11.1 162 679-888 85-274 (282)
348 2o6s_A Variable lymphocyte rec 99.9 1.3E-21 4.6E-26 200.9 15.2 184 38-243 3-186 (208)
349 1h6u_A Internalin H; cell adhe 99.9 1.4E-21 4.9E-26 213.5 15.4 195 74-285 37-231 (308)
350 4ay9_X Follicle-stimulating ho 99.9 1.8E-21 6.1E-26 217.2 16.4 240 81-335 12-256 (350)
351 3cvr_A Invasion plasmid antige 99.9 4.8E-22 1.7E-26 232.7 10.3 214 32-293 33-252 (571)
352 3cvr_A Invasion plasmid antige 99.8 8E-21 2.7E-25 222.4 14.0 188 326-543 60-254 (571)
353 2o6s_A Variable lymphocyte rec 99.8 2.3E-20 7.8E-25 191.7 15.0 181 81-272 10-190 (208)
354 3e6j_A Variable lymphocyte rec 99.8 3.8E-20 1.3E-24 192.8 15.3 164 33-212 10-173 (229)
355 4b8c_D Glucose-repressible alc 99.8 6E-21 2E-25 232.4 4.5 235 8-257 128-369 (727)
356 2v9t_B SLIT homolog 2 protein 99.8 1.8E-19 6.2E-24 186.2 13.7 149 60-211 17-165 (220)
357 1h6t_A Internalin B; cell adhe 99.8 1.1E-19 3.9E-24 196.5 9.6 172 100-286 44-215 (291)
358 1m9s_A Internalin B; cell inva 99.8 1.9E-19 6.4E-24 213.5 10.8 197 78-291 21-217 (605)
359 2v70_A SLIT-2, SLIT homolog 2 99.8 7.7E-19 2.6E-23 181.5 14.0 151 58-211 15-166 (220)
360 1dce_A Protein (RAB geranylger 99.8 2.8E-21 9.6E-26 227.8 -5.0 204 322-561 346-551 (567)
361 2xot_A Amphoterin-induced prot 99.8 3.4E-19 1.2E-23 199.5 12.2 128 328-459 21-149 (361)
362 1h6t_A Internalin B; cell adhe 99.8 4.5E-19 1.5E-23 191.9 12.3 173 74-261 42-214 (291)
363 2xot_A Amphoterin-induced prot 99.8 3.5E-19 1.2E-23 199.5 11.1 175 58-235 22-202 (361)
364 2v9t_B SLIT homolog 2 protein 99.8 1.2E-18 3.9E-23 180.2 14.1 152 81-235 14-165 (220)
365 2v70_A SLIT-2, SLIT homolog 2 99.8 1.4E-18 4.9E-23 179.5 13.5 156 81-239 14-170 (220)
366 1m9s_A Internalin B; cell inva 99.8 1.4E-18 4.9E-23 205.9 14.2 181 74-269 39-219 (605)
367 3e6j_A Variable lymphocyte rec 99.8 2.8E-18 9.7E-23 178.5 14.3 136 399-560 41-176 (229)
368 1dce_A Protein (RAB geranylger 99.8 3.4E-21 1.2E-25 227.2 -9.3 207 99-332 346-567 (567)
369 4b8c_D Glucose-repressible alc 99.7 6.2E-19 2.1E-23 214.7 7.7 200 330-557 206-405 (727)
370 1zth_A RIO1 serine protein kin 99.7 1.8E-18 6.1E-23 183.5 9.5 137 686-849 49-219 (258)
371 4ezg_A Putative uncharacterize 99.7 4.6E-18 1.6E-22 172.6 11.4 156 370-557 40-195 (197)
372 1xeu_A Internalin C; cellular 99.7 3E-18 1E-22 182.3 9.1 169 76-260 17-185 (263)
373 1xeu_A Internalin C; cellular 99.7 2.4E-18 8.1E-23 183.1 8.2 168 351-558 20-187 (263)
374 1w8a_A SLIT protein; signaling 99.7 8.5E-18 2.9E-22 169.6 11.6 132 401-560 11-143 (192)
375 4ezg_A Putative uncharacterize 99.7 5.2E-18 1.8E-22 172.2 9.7 151 101-260 43-194 (197)
376 1w8a_A SLIT protein; signaling 99.7 1.2E-16 4.2E-21 161.1 14.2 133 328-464 11-144 (192)
377 3sb4_A Hypothetical leucine ri 99.7 5.6E-17 1.9E-21 179.1 9.3 287 149-452 24-327 (329)
378 3sb4_A Hypothetical leucine ri 99.7 1.8E-17 6.1E-22 183.1 4.6 293 68-404 13-327 (329)
379 2ell_A Acidic leucine-rich nuc 99.6 3.1E-16 1.1E-20 154.7 9.2 84 78-163 24-108 (168)
380 2o6r_A Variable lymphocyte rec 99.6 8.7E-16 3E-20 152.8 12.0 134 39-187 4-137 (177)
381 2ell_A Acidic leucine-rich nuc 99.6 4.1E-16 1.4E-20 153.8 9.4 136 102-240 24-164 (168)
382 2je0_A Acidic leucine-rich nuc 99.6 4.4E-16 1.5E-20 150.1 7.6 128 398-552 17-149 (149)
383 4gyi_A RIO2 kinase; protein ki 99.6 7E-16 2.4E-20 168.8 9.8 138 684-850 95-266 (397)
384 2wfh_A SLIT homolog 2 protein 99.6 2.2E-15 7.4E-20 151.9 12.5 108 103-211 32-139 (193)
385 4fdw_A Leucine rich hypothetic 99.6 8.5E-15 2.9E-19 164.9 17.8 264 78-386 113-382 (401)
386 2je0_A Acidic leucine-rich nuc 99.6 6.8E-16 2.3E-20 148.8 6.6 127 77-205 16-147 (149)
387 2wfh_A SLIT homolog 2 protein 99.6 4.6E-15 1.6E-19 149.4 12.5 127 105-235 13-139 (193)
388 2o6r_A Variable lymphocyte rec 99.6 8.2E-15 2.8E-19 145.8 12.3 129 80-211 9-137 (177)
389 1ds9_A Outer arm dynein; leuci 99.6 9E-17 3.1E-21 163.2 -3.0 135 396-560 16-157 (198)
390 1ds9_A Outer arm dynein; leuci 99.6 7.9E-17 2.7E-21 163.6 -3.8 156 351-557 19-186 (198)
391 4fdw_A Leucine rich hypothetic 99.6 5.6E-14 1.9E-18 158.2 18.1 247 73-337 131-382 (401)
392 1a9n_A U2A', U2A'; complex (nu 99.5 6.8E-15 2.3E-19 146.1 7.1 133 394-557 15-154 (176)
393 1a9n_A U2A', U2A'; complex (nu 99.5 9.4E-15 3.2E-19 145.1 6.8 135 370-533 15-154 (176)
394 4fs7_A Uncharacterized protein 99.5 1.9E-13 6.5E-18 154.8 17.4 313 95-456 64-376 (394)
395 4fs7_A Uncharacterized protein 99.5 4E-13 1.4E-17 152.1 19.9 334 114-499 59-392 (394)
396 3g39_A Variable lymphocyte rec 99.4 6.5E-13 2.2E-17 130.6 11.0 107 352-461 11-117 (170)
397 3g39_A Variable lymphocyte rec 99.4 6.7E-13 2.3E-17 130.6 10.6 103 58-163 13-115 (170)
398 2r9u_A Variable lymphocyte rec 99.4 9.9E-13 3.4E-17 129.8 11.5 110 353-466 15-124 (174)
399 2r9u_A Variable lymphocyte rec 99.4 1.3E-12 4.3E-17 129.0 10.7 104 57-163 15-118 (174)
400 3un9_A NLR family member X1; l 99.3 9.2E-14 3.1E-18 154.9 -4.1 140 398-558 101-254 (372)
401 4gt6_A Cell surface protein; l 99.3 8.8E-11 3E-15 132.8 19.2 133 390-554 257-389 (394)
402 4gt6_A Cell surface protein; l 99.3 1.6E-10 5.5E-15 130.6 20.4 84 369-455 260-343 (394)
403 2ifg_A High affinity nerve gro 99.2 1.4E-11 4.8E-16 136.9 10.4 108 41-163 7-116 (347)
404 3un9_A NLR family member X1; l 99.2 1E-13 3.5E-18 154.5 -8.1 134 102-235 72-224 (372)
405 2ifg_A High affinity nerve gro 99.2 5.2E-11 1.8E-15 132.3 11.7 104 354-460 12-117 (347)
406 3tm0_A Aminoglycoside 3'-phosp 99.2 4.1E-11 1.4E-15 127.4 10.3 147 679-847 9-212 (263)
407 1nd4_A Aminoglycoside 3'-phosp 99.0 6.6E-10 2.2E-14 118.0 7.8 138 683-847 19-213 (264)
408 3dxp_A Putative acyl-COA dehyd 98.9 6.8E-09 2.3E-13 115.6 11.7 147 687-849 41-249 (359)
409 2ra8_A Uncharacterized protein 98.9 8.9E-10 3E-14 121.5 4.2 165 390-577 164-341 (362)
410 4h09_A Hypothetical leucine ri 98.9 4.5E-08 1.5E-12 109.9 18.2 304 168-553 40-343 (379)
411 2ra8_A Uncharacterized protein 98.8 4.1E-10 1.4E-14 124.1 1.2 206 54-282 107-341 (362)
412 4h09_A Hypothetical leucine ri 98.8 1.1E-07 3.8E-12 106.7 21.0 128 73-208 41-168 (379)
413 3sg8_A APH(2'')-ID; antibiotic 98.8 1.7E-09 5.8E-14 117.5 4.4 192 689-903 25-287 (304)
414 3rw6_A Nuclear RNA export fact 98.8 3.9E-11 1.3E-15 125.1 -10.1 120 41-163 77-209 (267)
415 3r70_A Aminoglycoside phosphot 98.5 6.8E-07 2.3E-11 97.5 12.8 137 685-849 38-238 (320)
416 3rw6_A Nuclear RNA export fact 98.4 6.7E-08 2.3E-12 100.7 1.2 66 517-583 168-237 (267)
417 1io0_A Tropomodulin; LRR prote 98.3 1E-08 3.6E-13 101.9 -5.3 122 70-211 28-164 (185)
418 4gkh_A Aminoglycoside 3'-phosp 98.3 1.4E-06 4.6E-11 92.7 10.8 142 683-847 24-222 (272)
419 3d1u_A Putative fructosamine-3 98.3 3.4E-06 1.2E-10 89.9 11.8 77 688-774 19-98 (288)
420 1io0_A Tropomodulin; LRR prote 98.2 6.9E-08 2.3E-12 95.9 -2.2 121 95-235 29-164 (185)
421 3tdw_A Gentamicin resistance p 98.2 5.2E-06 1.8E-10 89.7 11.5 137 689-848 24-224 (306)
422 3ovc_A Hygromycin-B 4-O-kinase 98.1 9.8E-06 3.3E-10 89.6 12.6 78 686-774 43-122 (362)
423 3ats_A Putative uncharacterize 97.9 1.7E-05 5.9E-10 87.8 9.5 86 689-776 25-123 (357)
424 3e4g_A ATP synthase subunit S, 97.8 2.1E-06 7.1E-11 82.7 -0.4 82 79-160 62-149 (176)
425 3e4g_A ATP synthase subunit S, 97.8 6.3E-06 2.2E-10 79.3 2.5 84 102-185 61-150 (176)
426 2olc_A MTR kinase, methylthior 97.8 3.8E-05 1.3E-09 86.4 8.9 76 689-771 35-120 (397)
427 2q83_A YTAA protein; 2635576, 97.7 0.0002 6.7E-09 78.7 13.4 152 690-847 38-251 (346)
428 3f7w_A Putative fructosamine-3 97.5 0.00024 8.3E-09 75.8 10.1 79 685-773 16-97 (288)
429 3jr1_A Putative fructosamine-3 97.5 0.00065 2.2E-08 72.8 12.2 75 689-773 41-118 (312)
430 2ppq_A HSK, HK, homoserine kin 97.3 0.0011 3.6E-08 72.1 12.6 172 672-847 5-216 (322)
431 2pyw_A Uncharacterized protein 97.2 0.0012 4E-08 74.7 11.0 79 818-900 232-313 (420)
432 1zyl_A Hypothetical protein YI 97.1 0.0019 6.4E-08 70.3 11.3 99 671-773 8-114 (328)
433 3dxq_A Choline/ethanolamine ki 97.0 0.0017 5.7E-08 69.7 9.1 73 687-773 21-95 (301)
434 3feg_A Choline/ethanolamine ki 96.9 0.0022 7.5E-08 70.6 9.2 144 689-847 55-253 (379)
435 2qg7_A Ethanolamine kinase PV0 96.8 0.0045 1.5E-07 70.1 11.4 76 689-774 113-189 (458)
436 1nw1_A Choline kinase (49.2 KD 96.8 0.0028 9.7E-08 71.4 9.4 74 689-773 78-159 (429)
437 3csv_A Aminoglycoside phosphot 96.8 0.0027 9.3E-08 69.1 8.9 32 817-848 182-217 (333)
438 1pgv_A TMD-1, tropomodulin TMD 96.6 0.00023 8E-09 69.7 -1.2 41 75-115 38-83 (197)
439 1pgv_A TMD-1, tropomodulin TMD 96.5 0.00034 1.2E-08 68.6 -0.3 40 196-235 39-83 (197)
440 3rfe_A Platelet glycoprotein I 96.4 0.0028 9.6E-08 58.0 4.9 56 499-556 12-68 (130)
441 3i1a_A Spectinomycin phosphotr 96.3 0.011 3.7E-07 64.4 10.0 31 818-848 206-236 (339)
442 3c5i_A Choline kinase; choline 96.3 0.0075 2.6E-07 66.6 8.9 75 689-773 38-121 (369)
443 3rfe_A Platelet glycoprotein I 96.1 0.0059 2E-07 55.8 5.5 56 154-211 12-68 (130)
444 2yle_A Protein spire homolog 1 95.9 0.023 7.8E-07 55.8 8.9 103 771-902 33-135 (229)
445 3f2s_A CK, chetk-alpha, cholin 95.8 0.024 8E-07 62.6 9.7 145 689-847 57-279 (401)
446 3mes_A Choline kinase; malaria 94.6 0.059 2E-06 60.0 8.0 75 689-773 75-157 (424)
447 3g15_A CK, chetk-alpha, cholin 90.2 0.12 4.2E-06 57.4 3.0 28 820-847 246-279 (401)
448 4ann_A ESSB; membrane protein, 75.3 3.6 0.00012 40.3 5.6 118 739-906 43-160 (215)
449 2ks1_B Epidermal growth factor 74.0 3.4 0.00012 28.8 3.6 24 630-653 13-37 (44)
450 3cxl_A N-chimerin; SH2, RHO-GA 73.6 0.35 1.2E-05 54.6 -2.4 60 687-749 145-212 (463)
451 2jwa_A Receptor tyrosine-prote 72.9 3.3 0.00011 28.8 3.2 23 631-653 14-36 (44)
452 4ano_A ESSB; membrane protein, 71.8 5.6 0.00019 39.2 6.1 82 792-904 81-163 (219)
453 2l2t_A Receptor tyrosine-prote 62.2 5.9 0.0002 27.6 2.8 23 632-654 14-37 (44)
454 2k9y_A Ephrin type-A receptor 37.7 13 0.00044 25.4 1.4 8 633-640 18-25 (41)
455 2lz0_A Uncharacterized protein 37.3 81 0.0028 26.4 6.7 45 90-135 8-52 (100)
456 2lz0_A Uncharacterized protein 36.5 60 0.0021 27.2 5.8 45 162-207 8-52 (100)
457 3ls8_A Phosphatidylinositol 3- 34.9 4.1E+02 0.014 30.4 14.0 47 794-847 453-501 (614)
458 1cja_A Protein (actin-fragmin 30.4 2.7E+02 0.0091 29.2 10.4 140 690-848 75-237 (342)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=6.5e-81 Score=772.71 Aligned_cols=594 Identities=30% Similarity=0.462 Sum_probs=438.7
Q ss_pred ccCChhhHHHHHHHHHhhccCCCCCCCCCCCCCCCCcccceEEcCCCCeEEEEeccccCCCCc---cC------------
Q 045798 7 AALEDGDRAALQAFKSMIAHEPQGILNSWNDSRHFCEWEGITCGRRHRRVTALDLMSKSLSGS---LS------------ 71 (1008)
Q Consensus 7 ~~~~~~~~~~l~~~k~~~~~~~~~~~~~w~~~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~~~---l~------------ 71 (1008)
+++.++|++||++||+++. ||. .+++|+.+++||.|.||+|+ .++|+.|||+++++.|. ++
T Consensus 7 ~~~~~~~~~all~~k~~~~-~~~-~l~~W~~~~~~C~w~gv~C~--~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~l 82 (768)
T 3rgz_A 7 SQSLYREIHQLISFKDVLP-DKN-LLPDWSSNKNPCTFDGVTCR--DDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESL 82 (768)
T ss_dssp -CCHHHHHHHHHHHHTTCS-CTT-SSTTCCTTSCGGGSTTEEEE--TTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCEE
T ss_pred ccCCHHHHHHHHHHHhhCC-Ccc-cccCCCCCCCCcCCcceEEC--CCcEEEEECCCCCcCCccCccChhHhccCccccc
Confidence 4557889999999999997 777 89999988999999999998 58999999999998886 44
Q ss_pred -----------cCccCCccCCeeeecCCCCCCCCCc--cccCCCCCCEEEccCCCCCCccCccc-ccCcCcceEeeeccc
Q 045798 72 -----------PHLGNLSFLREINLSNNTIQGEIPP--EFGRLFRLEALFLSNNSLVGKIPANL-SYCSRLTVLCIEYNK 137 (1008)
Q Consensus 72 -----------~~l~~l~~L~~L~L~~n~~~~~~p~--~~~~l~~L~~L~Ls~n~l~~~~p~~l-~~l~~L~~L~Ls~n~ 137 (1008)
+.++.+++|++|+|++|.+++.+|. .|+++++|++|+|++|.+++.+|..+ .++++|++|+|++|+
T Consensus 83 ~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~ 162 (768)
T 3rgz_A 83 FLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANS 162 (768)
T ss_dssp ECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSC
T ss_pred CCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCc
Confidence 4677888888888888888888887 88888888888888888887777665 667777777777777
Q ss_pred cccCCCcc---c----------------------cccCCCCeeecccccCCCCCCCCCccccccchhhcccccCCCCCCc
Q 045798 138 LQGRIPLE---F----------------------VSLSKLKDLSLAKNKLTGGIPPFLGNLTSLEVLSLAGNSFGRNIPD 192 (1008)
Q Consensus 138 l~~~~p~~---~----------------------~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 192 (1008)
+++..|.. + ..+++|++|+|++|++++.+|. ++++++|++|++++|++++..|.
T Consensus 163 l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~ 241 (768)
T 3rgz_A 163 ISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSR 241 (768)
T ss_dssp CEEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCHHH
T ss_pred cCCcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCcccH
Confidence 76655544 3 3455566666666666655554 66777777777777777666677
Q ss_pred cccCCCCCcEEEecCCcccccCCccccCCCCcceeccccccccccCChhhhhcCCCCcEEEeccccCCCCCCcccccCCC
Q 045798 193 SLGQLKQLKILAIGGNNLSGPIPPSIYNLSFLVVFSVSHNQIHGSLPPSLGLLLPNLKFFQIHHNFFSGSIPISLSNASK 272 (1008)
Q Consensus 193 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 272 (1008)
+|+.+++|++|++++|.+++.+|.. .+++|++|++++|++++.+|..++..+++|++|+|++|.+.+.+|..+.++++
T Consensus 242 ~l~~l~~L~~L~Ls~n~l~~~~~~~--~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~ 319 (768)
T 3rgz_A 242 AISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSL 319 (768)
T ss_dssp HTTTCSSCCEEECCSSCCEESCCCC--CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTT
T ss_pred HHhcCCCCCEEECCCCcccCccCcc--ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCC
Confidence 7777777777777777776655544 56666777777777766777777665678888888888887777888888888
Q ss_pred Cceeeccccccccccccc-ccCCCcccccccccccCCC-CCCCcc-----------------------------------
Q 045798 273 LEHIEIANNNFSGKLSVN-FGGMKNLSLLNLQFSNLGS-GESDEM----------------------------------- 315 (1008)
Q Consensus 273 L~~L~L~~N~l~~~~~~~-~~~l~~L~~L~L~~n~l~~-~~~~~~----------------------------------- 315 (1008)
|++|++++|++.+..|.. |..+++|+.|++++|++.. ......
T Consensus 320 L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L 399 (768)
T 3rgz_A 320 LESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQEL 399 (768)
T ss_dssp CCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEE
T ss_pred ccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEE
Confidence 888888888877655544 7777777777777776641 111000
Q ss_pred ---------cccccccccCCCcEEEecCCcCCccCChhhhhhcccceeeeeccccccCCCCCccccccccceEEecCccc
Q 045798 316 ---------GFMNSLTNCSKLRVLSLGGNQFRGALPHSIANLSSQLQILILSSNQFYGSIPLGIGNLVDLYLLGMVENQF 386 (1008)
Q Consensus 316 ---------~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l 386 (1008)
..+..+..+++|+.|++++|++++.+|..+..+. +|++|++++|.+++.+|..+..+++|+.|++++|++
T Consensus 400 ~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~-~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l 478 (768)
T 3rgz_A 400 YLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLS-KLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDL 478 (768)
T ss_dssp ECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCT-TCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCC
T ss_pred ECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCC-CCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcc
Confidence 1222344555555555555555555555555554 356666666666555666666666666666666666
Q ss_pred cCCcchhccCCCCCceEEccCCcccccccccccCCCCcceeeccccccccccCCCCcCCCcccEeecccccccCCcchhh
Q 045798 387 TGAIPKEMGKLQKLQGLDFSGNHFSGEIPSSLGNLSSLYEVFFNNNNLSGVIPFSLGNLKRLAFLEMSGNELSGTIPEDI 466 (1008)
Q Consensus 387 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~~~ 466 (1008)
++.+|..+..+++|++|+|++|++++.+|.+++.+++|++|+|++|++++.+|..++++++|++|+|++|+++|.+|..+
T Consensus 479 ~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~ 558 (768)
T 3rgz_A 479 TGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAM 558 (768)
T ss_dssp CSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGG
T ss_pred cCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHH
Confidence 66666666666666666666666666666666666666666666666666666666666666666666666666666655
Q ss_pred hhhhhh---------------------------------------------hhhhcccCccccCCCcccccccccccccc
Q 045798 467 FNISYL---------------------------------------------SNSLNLARNHLVGIIPPRIGNLRALRSFD 501 (1008)
Q Consensus 467 ~~~~~~---------------------------------------------~~~L~L~~N~l~~~~p~~~~~l~~L~~Ld 501 (1008)
+..... .+.++++.|.+.|.+|..++.+++|+.||
T Consensus 559 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~Ld 638 (768)
T 3rgz_A 559 FKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLD 638 (768)
T ss_dssp GTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEE
T ss_pred hcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEE
Confidence 442211 11233444666666666777788999999
Q ss_pred cccccccCCCCcccccccccceeeccCcccccchhhhhhccccccEEecCCCcccccccCc-ccccccceeecccCcccc
Q 045798 502 VSNNDLSGEIPIELGHCSSLEEIYLAGNLFHGSIPSFFNALKGVQKIDLSRNNLSGQIPIF-LEALSLEYLNLSFNDFEG 580 (1008)
Q Consensus 502 ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~-~~~~~L~~L~l~~N~l~g 580 (1008)
||+|+++|.+|.+++.+++|+.|+|++|+|+|.+|..|+.+++|+.||||+|+++|.+|.. ..+.+|++||+++|+|+|
T Consensus 639 Ls~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g 718 (768)
T 3rgz_A 639 MSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSG 718 (768)
T ss_dssp CCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEE
T ss_pred CcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccc
Confidence 9999999999999999999999999999999999999999999999999999999999988 678899999999999999
Q ss_pred cCCCCcccCCcccceeccCCccCCCCCC
Q 045798 581 KIPAKGIFANASAISVVGCNRLCGGIPE 608 (1008)
Q Consensus 581 ~~p~~~~~~~~~~~~~~~n~~l~g~~~~ 608 (1008)
.||..++|.++...+|.||+++||.+..
T Consensus 719 ~iP~~~~~~~~~~~~~~gN~~Lcg~~l~ 746 (768)
T 3rgz_A 719 PIPEMGQFETFPPAKFLNNPGLCGYPLP 746 (768)
T ss_dssp ECCSSSSGGGSCGGGGCSCTEEESTTSC
T ss_pred cCCCchhhccCCHHHhcCCchhcCCCCc
Confidence 9999999999999999999999997643
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=5e-63 Score=612.59 Aligned_cols=514 Identities=33% Similarity=0.486 Sum_probs=433.6
Q ss_pred eEEEEeccccCCCCccCcCccCCccCCeeeecCCCCCCCCCccccCCCCCCEEEccCCCCCCccCcccccCcCcceEeee
Q 045798 55 RVTALDLMSKSLSGSLSPHLGNLSFLREINLSNNTIQGEIPPEFGRLFRLEALFLSNNSLVGKIPANLSYCSRLTVLCIE 134 (1008)
Q Consensus 55 ~v~~l~l~~~~l~~~l~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls 134 (1008)
.++.|++++|.+++.++. ..+++|++|+|++|++++.+|. |+++++|++|+|++|.+++.+|..++.+++|++|+|+
T Consensus 179 ~L~~L~Ls~n~l~~~~~~--~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls 255 (768)
T 3rgz_A 179 ELKHLAISGNKISGDVDV--SRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNIS 255 (768)
T ss_dssp TCCEEECCSSEEESCCBC--TTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEEECC
T ss_pred CCCEEECCCCcccccCCc--ccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCcccHHHhcCCCCCEEECC
Confidence 344555555555543332 5677777777777777766665 7777777777777777777777777777777777777
Q ss_pred ccccccCCCccccccCCCCeeecccccCCCCCCCCCccc-cccchhhcccccCCCCCCccccCCCCCcEEEecCCccccc
Q 045798 135 YNKLQGRIPLEFVSLSKLKDLSLAKNKLTGGIPPFLGNL-TSLEVLSLAGNSFGRNIPDSLGQLKQLKILAIGGNNLSGP 213 (1008)
Q Consensus 135 ~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 213 (1008)
+|++.+.+|.. .+++|++|++++|++++.+|..+..+ ++|++|+|++|++++..|..|+.+++|++|++++|.+++.
T Consensus 256 ~n~l~~~~~~~--~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ 333 (768)
T 3rgz_A 256 SNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGE 333 (768)
T ss_dssp SSCCEESCCCC--CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEE
T ss_pred CCcccCccCcc--ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCc
Confidence 77777666654 67777778888887777777777665 7888888888888777888888888888888888888777
Q ss_pred CCcc-ccCCCCcceeccccccccccCChhhhhcCCCCcEEEeccccCCCCCCccccc--CCCCceeeccccccccccccc
Q 045798 214 IPPS-IYNLSFLVVFSVSHNQIHGSLPPSLGLLLPNLKFFQIHHNFFSGSIPISLSN--ASKLEHIEIANNNFSGKLSVN 290 (1008)
Q Consensus 214 ~~~~-~~~l~~L~~L~ls~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~--l~~L~~L~L~~N~l~~~~~~~ 290 (1008)
+|.. +.++++|++|++++|++++.+|..+....++|++|+|++|.+.+.+|..+.. +++|++|++++|++++..|..
T Consensus 334 ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~ 413 (768)
T 3rgz_A 334 LPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPT 413 (768)
T ss_dssp CCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGG
T ss_pred CCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHH
Confidence 7765 7888888888888888887888777664458888888888888777777776 788999999999999899999
Q ss_pred ccCCCcccccccccccCCCCCCCcccccccccccCCCcEEEecCCcCCccCChhhhhhcccceeeeeccccccCCCCCcc
Q 045798 291 FGGMKNLSLLNLQFSNLGSGESDEMGFMNSLTNCSKLRVLSLGGNQFRGALPHSIANLSSQLQILILSSNQFYGSIPLGI 370 (1008)
Q Consensus 291 ~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~ 370 (1008)
|..+++|+.|++++|+++... +..+..+++|+.|++++|++.+.+|..+..+. +|++|+|++|++++.+|..+
T Consensus 414 l~~l~~L~~L~Ls~N~l~~~~------p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~l 486 (768)
T 3rgz_A 414 LSNCSELVSLHLSFNYLSGTI------PSSLGSLSKLRDLKLWLNMLEGEIPQELMYVK-TLETLILDFNDLTGEIPSGL 486 (768)
T ss_dssp GGGCTTCCEEECCSSEEESCC------CGGGGGCTTCCEEECCSSCCCSCCCGGGGGCT-TCCEEECCSSCCCSCCCGGG
T ss_pred HhcCCCCCEEECcCCcccCcc------cHHHhcCCCCCEEECCCCcccCcCCHHHcCCC-CceEEEecCCcccCcCCHHH
Confidence 999999999999999887533 34688999999999999999999999999886 59999999999999999999
Q ss_pred ccccccceEEecCccccCCcchhccCCCCCceEEccCCcccccccccccCCCCcceeeccccccccccCCCCcCCCccc-
Q 045798 371 GNLVDLYLLGMVENQFTGAIPKEMGKLQKLQGLDFSGNHFSGEIPSSLGNLSSLYEVFFNNNNLSGVIPFSLGNLKRLA- 449 (1008)
Q Consensus 371 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~- 449 (1008)
.++++|+.|++++|++++.+|.+++.+++|++|+|++|++++.+|..+..+++|+.|++++|.++|.+|..+..+..+.
T Consensus 487 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~ 566 (768)
T 3rgz_A 487 SNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIA 566 (768)
T ss_dssp GGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBC
T ss_pred hcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhh
Confidence 9999999999999999999999999999999999999999999999999999999999999999999998776654433
Q ss_pred ---------------------------------------------EeecccccccCCcchhhhhhhhhhhhhcccCcccc
Q 045798 450 ---------------------------------------------FLEMSGNELSGTIPEDIFNISYLSNSLNLARNHLV 484 (1008)
Q Consensus 450 ---------------------------------------------~L~Ls~N~l~~~lp~~~~~~~~~~~~L~L~~N~l~ 484 (1008)
.++++.|.++|.+|..+..... ++.|+|++|+++
T Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~-L~~LdLs~N~l~ 645 (768)
T 3rgz_A 567 ANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGS-MMFLDMSYNMLS 645 (768)
T ss_dssp CSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBC-CCEEECCSSCCB
T ss_pred hhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhcccc-ccEEECcCCccc
Confidence 3445557788888877655444 478999999999
Q ss_pred CCCcccccccccccccccccccccCCCCcccccccccceeeccCcccccchhhhhhccccccEEecCCCcccccccCccc
Q 045798 485 GIIPPRIGNLRALRSFDVSNNDLSGEIPIELGHCSSLEEIYLAGNLFHGSIPSFFNALKGVQKIDLSRNNLSGQIPIFLE 564 (1008)
Q Consensus 485 ~~~p~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~ 564 (1008)
|.+|..|+.+++|+.|||++|+++|.+|..|+.+++|++|||++|+++|.+|..++.++.|+.||||+|+++|.||....
T Consensus 646 g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~ 725 (768)
T 3rgz_A 646 GYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQ 725 (768)
T ss_dssp SCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSS
T ss_pred ccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998877
Q ss_pred ccccceeecccCc-cccc
Q 045798 565 ALSLEYLNLSFND-FEGK 581 (1008)
Q Consensus 565 ~~~L~~L~l~~N~-l~g~ 581 (1008)
..++..+.+.+|. +.|.
T Consensus 726 ~~~~~~~~~~gN~~Lcg~ 743 (768)
T 3rgz_A 726 FETFPPAKFLNNPGLCGY 743 (768)
T ss_dssp GGGSCGGGGCSCTEEEST
T ss_pred hccCCHHHhcCCchhcCC
Confidence 7788888888885 6664
No 3
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=1e-58 Score=569.45 Aligned_cols=563 Identities=21% Similarity=0.204 Sum_probs=473.7
Q ss_pred CCcccceEEcCC---------CCeEEEEeccccCCCCccCcCccCCccCCeeeecCCCCCCCCCccccCCCCCCEEEccC
Q 045798 41 FCEWEGITCGRR---------HRRVTALDLMSKSLSGSLSPHLGNLSFLREINLSNNTIQGEIPPEFGRLFRLEALFLSN 111 (1008)
Q Consensus 41 ~c~w~gv~c~~~---------~~~v~~l~l~~~~l~~~l~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~ 111 (1008)
.|.++.+.|... ..+++.|||++|.+++..+..+..+++|++|+|++|.+++..|..|.++++|++|+|++
T Consensus 3 ~~~~~~~~cs~~~L~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 82 (680)
T 1ziw_A 3 TVSHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQH 82 (680)
T ss_dssp -CBSSEEECCSSCCSSCCSCSCTTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCS
T ss_pred eeECCeeECCCCCccccccccCCCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCC
Confidence 355555666531 35799999999999987777899999999999999999999999999999999999999
Q ss_pred CCCCCccCcccccCcCcceEeeeccccccCCCccccccCCCCeeecccccCCCCCCCCCccccccchhhcccccCCCCCC
Q 045798 112 NSLVGKIPANLSYCSRLTVLCIEYNKLQGRIPLEFVSLSKLKDLSLAKNKLTGGIPPFLGNLTSLEVLSLAGNSFGRNIP 191 (1008)
Q Consensus 112 n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 191 (1008)
|.+++..+..|+++++|++|+|++|++++..|..|+++++|++|+|++|.+++..|..++++++|++|++++|.+++..+
T Consensus 83 n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 162 (680)
T 1ziw_A 83 NELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKS 162 (680)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCH
T ss_pred CccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCH
Confidence 99996666689999999999999999998888899999999999999999998889999999999999999999988877
Q ss_pred cccc--CCCCCcEEEecCCcccccCCccccCC---------------------------CCcceeccccccccccCChhh
Q 045798 192 DSLG--QLKQLKILAIGGNNLSGPIPPSIYNL---------------------------SFLVVFSVSHNQIHGSLPPSL 242 (1008)
Q Consensus 192 ~~~~--~l~~L~~L~L~~n~l~~~~~~~~~~l---------------------------~~L~~L~ls~N~l~~~lp~~~ 242 (1008)
..+. .+++|+.|++++|.+++..|..+..+ ++|+.|++++|.+.+..|..+
T Consensus 163 ~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~ 242 (680)
T 1ziw_A 163 EELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTF 242 (680)
T ss_dssp HHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTT
T ss_pred HHhhccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHh
Confidence 7765 56899999999999998888877765 456677777777776555554
Q ss_pred hhc-CCCCcEEEeccccCCCCCCcccccCCCCceeecccccccccccccccCCCcccccccccccCCCCCCCccccc---
Q 045798 243 GLL-LPNLKFFQIHHNFFSGSIPISLSNASKLEHIEIANNNFSGKLSVNFGGMKNLSLLNLQFSNLGSGESDEMGFM--- 318 (1008)
Q Consensus 243 ~~~-l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~--- 318 (1008)
... .++|+.|+|++|.+.+..|..+..+++|++|++++|++.+..+..|.++++|+.|+++.|.....- ....++
T Consensus 243 ~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~-~~~~lp~i~ 321 (680)
T 1ziw_A 243 LGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSI-SLASLPKID 321 (680)
T ss_dssp GGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC-------CCEEC
T ss_pred hccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhccc-ccccccccC
Confidence 431 145999999999988888888888999999999999998888888889999999998876443110 000111
Q ss_pred -ccccccCCCcEEEecCCcCCccCChhhhhhcccceeeeeccccccCC--CCCccccc--cccceEEecCccccCCcchh
Q 045798 319 -NSLTNCSKLRVLSLGGNQFRGALPHSIANLSSQLQILILSSNQFYGS--IPLGIGNL--VDLYLLGMVENQFTGAIPKE 393 (1008)
Q Consensus 319 -~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~--~p~~~~~l--~~L~~L~L~~n~l~~~~~~~ 393 (1008)
..+..+++|+.|++++|++.+..+..+..+. +|++|++++|.+... .+..+..+ ++|+.|++++|++++..|..
T Consensus 322 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~-~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~ 400 (680)
T 1ziw_A 322 DFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLI-NLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDA 400 (680)
T ss_dssp TTTTTTCTTCCEEECCSCCBCCCCTTTTTTCT-TCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTT
T ss_pred hhhcccCCCCCEEECCCCccCCCChhHhcccc-CCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhh
Confidence 1567889999999999999987787888876 599999999986422 22234333 58999999999999999999
Q ss_pred ccCCCCCceEEccCCccccccc-ccccCCCCcceeeccccccccccCCCCcCCCcccEeeccccccc--CCcchhhhhhh
Q 045798 394 MGKLQKLQGLDFSGNHFSGEIP-SSLGNLSSLYEVFFNNNNLSGVIPFSLGNLKRLAFLEMSGNELS--GTIPEDIFNIS 470 (1008)
Q Consensus 394 ~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~--~~lp~~~~~~~ 470 (1008)
|..+++|+.|+|++|++.+.+| ..|.++++|++|++++|++.+..+..|..+++|+.|++++|.++ +.+|..+....
T Consensus 401 ~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~ 480 (680)
T 1ziw_A 401 FSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLR 480 (680)
T ss_dssp TTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCT
T ss_pred hhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCC
Confidence 9999999999999999987666 68999999999999999999999999999999999999999987 56777666554
Q ss_pred hhhhhhcccCccccCCCcccccccccccccccccccccCCC--------CcccccccccceeeccCcccccchhhhhhcc
Q 045798 471 YLSNSLNLARNHLVGIIPPRIGNLRALRSFDVSNNDLSGEI--------PIELGHCSSLEEIYLAGNLFHGSIPSFFNAL 542 (1008)
Q Consensus 471 ~~~~~L~L~~N~l~~~~p~~~~~l~~L~~Ldls~N~l~~~~--------p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 542 (1008)
. ++.|+|++|++++..|..|+.+++|+.|+|++|.+++.. +..+..+++|++|+|++|+++...+..|..+
T Consensus 481 ~-L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l 559 (680)
T 1ziw_A 481 N-LTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDL 559 (680)
T ss_dssp T-CCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTC
T ss_pred C-CCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccc
Confidence 4 578999999999988888999999999999999998532 2347899999999999999996555679999
Q ss_pred ccccEEecCCCcccccccCc-ccccccceeecccCcccccCCCCc--ccCCcccceeccCCccCCCC
Q 045798 543 KGVQKIDLSRNNLSGQIPIF-LEALSLEYLNLSFNDFEGKIPAKG--IFANASAISVVGCNRLCGGI 606 (1008)
Q Consensus 543 ~~L~~L~ls~N~l~~~~p~~-~~~~~L~~L~l~~N~l~g~~p~~~--~~~~~~~~~~~~n~~l~g~~ 606 (1008)
++|+.|||++|++++..+.. ..+.+|+.|+|++|.|++.+|... .+.++..+.+.||++.|+|.
T Consensus 560 ~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~ 626 (680)
T 1ziw_A 560 FELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCE 626 (680)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCC
T ss_pred cCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCc
Confidence 99999999999999766655 578899999999999999877542 46778888999999999975
No 4
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=2.8e-58 Score=556.71 Aligned_cols=511 Identities=19% Similarity=0.231 Sum_probs=335.7
Q ss_pred hhccCChhhHHHHHHHHHhhccCCCCC-------CCCCCCCCCCCcc---cceEEcCCCCeEEEEeccccCCCCccCcCc
Q 045798 5 QVAALEDGDRAALQAFKSMIAHEPQGI-------LNSWNDSRHFCEW---EGITCGRRHRRVTALDLMSKSLSGSLSPHL 74 (1008)
Q Consensus 5 ~~~~~~~~~~~~l~~~k~~~~~~~~~~-------~~~w~~~~~~c~w---~gv~c~~~~~~v~~l~l~~~~l~~~l~~~l 74 (1008)
.+++....|+.||.+|+.++..+.+.. ..+|+.+++||.| .||+|+.. ++|+.|+|+++++.|.+|+++
T Consensus 23 ~~~~~~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~~~c~w~~~~GV~C~~~-~~V~~L~L~~~~l~g~lp~~l 101 (636)
T 4eco_A 23 SRTAEYIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKELDMWGAQPGVSLNSN-GRVTGLSLEGFGASGRVPDAI 101 (636)
T ss_dssp CCCCHHHHHHHHHHHHHHHTTGGGCCCCC------CCCCCSSCGGGTTCCTTEEECTT-CCEEEEECTTSCCEEEECGGG
T ss_pred hhhhhHHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCCCcccccCCCCeEEcCC-CCEEEEEecCcccCCcCChHH
Confidence 345666789999999999986544332 2389999999999 99999865 899999999999999999999
Q ss_pred cCCccCCeeeecCCCCC------C------CCCccccCCCCCCEEEccCCCCCCccCccccc-CcCcceEeeeccccccC
Q 045798 75 GNLSFLREINLSNNTIQ------G------EIPPEFGRLFRLEALFLSNNSLVGKIPANLSY-CSRLTVLCIEYNKLQGR 141 (1008)
Q Consensus 75 ~~l~~L~~L~L~~n~~~------~------~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~-l~~L~~L~Ls~n~l~~~ 141 (1008)
+.+++|++|+|++|.+. + .+|... +..|+ +++++|.+.+.+|..++. +..+..+++....+..
T Consensus 102 ~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~- 177 (636)
T 4eco_A 102 GQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKK- 177 (636)
T ss_dssp GGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCC-
T ss_pred hcCccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhhHHHHHHHHhhcCcccccccc-
Confidence 99999999999999762 2 334333 45566 777778777777766663 2334444444332221
Q ss_pred CCccccccCCCCeeecc--cccCCCCCCCCCccccccchhhcccccCCCC-----------------CCcccc--CCCCC
Q 045798 142 IPLEFVSLSKLKDLSLA--KNKLTGGIPPFLGNLTSLEVLSLAGNSFGRN-----------------IPDSLG--QLKQL 200 (1008)
Q Consensus 142 ~p~~~~~l~~L~~L~L~--~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-----------------~~~~~~--~l~~L 200 (1008)
.....++.+.+. +|++++ +|..|+++++|++|+|++|++++. +|..++ ++++|
T Consensus 178 -----~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L 251 (636)
T 4eco_A 178 -----SSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDL 251 (636)
T ss_dssp -----CCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTC
T ss_pred -----ccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCC
Confidence 112233333333 567776 777777777777777777777664 788877 88888
Q ss_pred cEEEecCCcccccCCccccCCCCcceecccccc-ccc-cCChhhhhc-----CCCCcEEEeccccCCCCCCc--ccccCC
Q 045798 201 KILAIGGNNLSGPIPPSIYNLSFLVVFSVSHNQ-IHG-SLPPSLGLL-----LPNLKFFQIHHNFFSGSIPI--SLSNAS 271 (1008)
Q Consensus 201 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~ls~N~-l~~-~lp~~~~~~-----l~~L~~L~L~~N~l~~~~p~--~l~~l~ 271 (1008)
++|+|++|.+.+.+|..|+++++|++|++++|+ ++| .+|..++.. +++|++|+|++|.++ .+|. .+.+++
T Consensus 252 ~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~ 330 (636)
T 4eco_A 252 TDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMK 330 (636)
T ss_dssp CEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCT
T ss_pred CEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCC
Confidence 888888888888888888888888888888887 887 788777652 478899999999888 7887 888888
Q ss_pred CCceeecccccccccccccccCCCcccccccccccCCCCCCCcccccccccccCC-CcEEEecCCcCCccCChhhhhhc-
Q 045798 272 KLEHIEIANNNFSGKLSVNFGGMKNLSLLNLQFSNLGSGESDEMGFMNSLTNCSK-LRVLSLGGNQFRGALPHSIANLS- 349 (1008)
Q Consensus 272 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~l~~-L~~L~Ls~N~l~~~~p~~~~~l~- 349 (1008)
+|++|++++|++.+..| .|..+++|+.|++++|+++.+ +..+..+++ |+.|++++|+++ .+|..+....
T Consensus 331 ~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~~l-------p~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l 401 (636)
T 4eco_A 331 KLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQITEI-------PANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSV 401 (636)
T ss_dssp TCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEEEC-------CTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCS
T ss_pred CCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccccc-------cHhhhhhcccCcEEEccCCcCc-ccchhhhhccc
Confidence 99999999988886666 666666666666655555421 223445555 555555555555 4554443321
Q ss_pred ccceeeeeccccccCCCCCccc-------cccccceEEecCccccCCcchhccCCCCCceEEccCCcccccccccccCCC
Q 045798 350 SQLQILILSSNQFYGSIPLGIG-------NLVDLYLLGMVENQFTGAIPKEMGKLQKLQGLDFSGNHFSGEIPSSLGNLS 422 (1008)
Q Consensus 350 ~~L~~L~Ls~N~l~~~~p~~~~-------~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 422 (1008)
.+|++|++++|.+++.+|..+. .+.+|+.|+|++|++++..+..+..+++|+.|+|++|+++ .+|.......
T Consensus 402 ~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~ 480 (636)
T 4eco_A 402 SVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDE 480 (636)
T ss_dssp SCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEET
T ss_pred CccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccc
Confidence 1355555555555555555554 4444555555555554322233334444555555555444 3332211100
Q ss_pred CcceeeccccccccccCCCCcCCCcccEeecccccccCCcchhhhhhhhhhhhhcccCccccCCCccccc--cccccccc
Q 045798 423 SLYEVFFNNNNLSGVIPFSLGNLKRLAFLEMSGNELSGTIPEDIFNISYLSNSLNLARNHLVGIIPPRIG--NLRALRSF 500 (1008)
Q Consensus 423 ~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~~~~~~~~~~~~L~L~~N~l~~~~p~~~~--~l~~L~~L 500 (1008)
+..+.++++|+.|+|++|+++ . +|..+. .+++|+.|
T Consensus 481 ----------------~~~~~~l~~L~~L~Ls~N~l~-~-------------------------lp~~~~~~~l~~L~~L 518 (636)
T 4eco_A 481 ----------------NENFKNTYLLTSIDLRFNKLT-K-------------------------LSDDFRATTLPYLVGI 518 (636)
T ss_dssp ----------------TEECTTGGGCCEEECCSSCCC-B-------------------------CCGGGSTTTCTTCCEE
T ss_pred ----------------cccccccCCccEEECcCCcCC-c-------------------------cChhhhhccCCCcCEE
Confidence 000112235666666666665 2 333343 45566666
Q ss_pred ccccccccCCCCcccccccccceeec------cCcccccchhhhhhccccccEEecCCCcccccccCcccccccceeecc
Q 045798 501 DVSNNDLSGEIPIELGHCSSLEEIYL------AGNLFHGSIPSFFNALKGVQKIDLSRNNLSGQIPIFLEALSLEYLNLS 574 (1008)
Q Consensus 501 dls~N~l~~~~p~~~~~l~~L~~L~L------~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~L~~L~l~ 574 (1008)
+|++|++++ +|..++.+++|++|+| ++|++.+.+|..|+.+++|+.|+|++|++ +.+|.... .+|+.|+++
T Consensus 519 ~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~~-~~L~~L~Ls 595 (636)
T 4eco_A 519 DLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEKIT-PNISVLDIK 595 (636)
T ss_dssp ECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC-TTCCEEECC
T ss_pred ECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHhHh-CcCCEEECc
Confidence 666666654 5666666666666666 56777777888888888888888888888 56666533 578888888
Q ss_pred cCcccccC
Q 045798 575 FNDFEGKI 582 (1008)
Q Consensus 575 ~N~l~g~~ 582 (1008)
+|++....
T Consensus 596 ~N~l~~~~ 603 (636)
T 4eco_A 596 DNPNISID 603 (636)
T ss_dssp SCTTCEEE
T ss_pred CCCCcccc
Confidence 88666543
No 5
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=5e-56 Score=538.21 Aligned_cols=514 Identities=20% Similarity=0.173 Sum_probs=335.4
Q ss_pred eEEEEeccccCCCCccCcCccCCccCCeeeecCCCCCCCCCccccCCCCCCEEEccCCCCCCccCcccccCcCcceEeee
Q 045798 55 RVTALDLMSKSLSGSLSPHLGNLSFLREINLSNNTIQGEIPPEFGRLFRLEALFLSNNSLVGKIPANLSYCSRLTVLCIE 134 (1008)
Q Consensus 55 ~v~~l~l~~~~l~~~l~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls 134 (1008)
.++.|||++|.+++..|..++.+++|++|+|++|++++..|.+|.++++|++|+|++|++++..|..|+++++|++|+++
T Consensus 34 ~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 113 (606)
T 3t6q_A 34 STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFI 113 (606)
T ss_dssp TCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECT
T ss_pred cCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeecc
Confidence 35555555555554445555555555555555555555555555555555555555555555555555555555555555
Q ss_pred ccccccCCCccccccCCCCeeecccccCCCCCCCCCccccccchhhcccccCCCCCCccccCCCCCc--EEEecCCcccc
Q 045798 135 YNKLQGRIPLEFVSLSKLKDLSLAKNKLTGGIPPFLGNLTSLEVLSLAGNSFGRNIPDSLGQLKQLK--ILAIGGNNLSG 212 (1008)
Q Consensus 135 ~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~--~L~L~~n~l~~ 212 (1008)
+|++++..|..|+++++|++|++++|++++..++.+..+++|++|++++|.+++..+..|+.+++|+ .|++++|.+++
T Consensus 114 ~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~~ 193 (606)
T 3t6q_A 114 QTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAG 193 (606)
T ss_dssp TSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCCE
T ss_pred ccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccCc
Confidence 5555544455555555555555555555543323333355555555555555555555555555555 55555555555
Q ss_pred cCCccccCCCCcceeccccccccccCChhhhhcCCCCcEEEeccccCC-----CCCCcccccCC--CCceeecccccccc
Q 045798 213 PIPPSIYNLSFLVVFSVSHNQIHGSLPPSLGLLLPNLKFFQIHHNFFS-----GSIPISLSNAS--KLEHIEIANNNFSG 285 (1008)
Q Consensus 213 ~~~~~~~~l~~L~~L~ls~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~-----~~~p~~l~~l~--~L~~L~L~~N~l~~ 285 (1008)
..|..+.. .+|+.|++++|... +. .+..+.++....+.-+.+. ...+..+..+. +|+.|++++|.+.+
T Consensus 194 ~~~~~~~~-~~L~~L~l~~~~~~---~~-~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~ 268 (606)
T 3t6q_A 194 IEPGAFDS-AVFQSLNFGGTQNL---LV-IFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFN 268 (606)
T ss_dssp ECTTTTTT-CEEEEEECTTCSCH---HH-HHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSS
T ss_pred cChhHhhh-ccccccccCCchhH---HH-HhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCc
Confidence 44444333 34555555555411 11 1112233322222222111 11122233332 67888888888888
Q ss_pred cccccccCCCcccccccccccCCCCCCCcccccccccccCCCcEEEecCCcCCccCChhhhhhcccceeeeeccccccCC
Q 045798 286 KLSVNFGGMKNLSLLNLQFSNLGSGESDEMGFMNSLTNCSKLRVLSLGGNQFRGALPHSIANLSSQLQILILSSNQFYGS 365 (1008)
Q Consensus 286 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~ 365 (1008)
..+..|..+++|+.|++++|+++.++ ..+..+++|++|++++|++.+..|..+..+. +|++|++++|.+.+.
T Consensus 269 ~~~~~~~~l~~L~~L~l~~n~l~~lp-------~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~-~L~~L~l~~n~~~~~ 340 (606)
T 3t6q_A 269 ISSNTFHCFSGLQELDLTATHLSELP-------SGLVGLSTLKKLVLSANKFENLCQISASNFP-SLTHLSIKGNTKRLE 340 (606)
T ss_dssp CCTTTTTTCTTCSEEECTTSCCSCCC-------SSCCSCTTCCEEECTTCCCSBGGGGCGGGCT-TCSEEECCSCSSCCB
T ss_pred cCHHHhccccCCCEEeccCCccCCCC-------hhhcccccCCEEECccCCcCcCchhhhhccC-cCCEEECCCCCcccc
Confidence 77777888888888888888776543 3466778888888888888866676777765 488888888887766
Q ss_pred CCCc-cccccccceEEecCccccCCc--chhccCCCCCceEEccCCcccccccccccCCCCcceeeccccccccccCCC-
Q 045798 366 IPLG-IGNLVDLYLLGMVENQFTGAI--PKEMGKLQKLQGLDFSGNHFSGEIPSSLGNLSSLYEVFFNNNNLSGVIPFS- 441 (1008)
Q Consensus 366 ~p~~-~~~l~~L~~L~L~~n~l~~~~--~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~- 441 (1008)
+|.. +..+++|+.|++++|.+.+.. +..+..+++|++|+|++|++.+..|..|..+++|++|++++|.+.+..|..
T Consensus 341 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 420 (606)
T 3t6q_A 341 LGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSP 420 (606)
T ss_dssp CCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCT
T ss_pred cchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchh
Confidence 6554 778888888888888887665 667788888888888888887777778888888888888888887765543
Q ss_pred CcCCCcccEeecccccccCCcchhhhhhhhhhhhhcccCccccCC---CcccccccccccccccccccccCCCCcccccc
Q 045798 442 LGNLKRLAFLEMSGNELSGTIPEDIFNISYLSNSLNLARNHLVGI---IPPRIGNLRALRSFDVSNNDLSGEIPIELGHC 518 (1008)
Q Consensus 442 ~~~l~~L~~L~Ls~N~l~~~lp~~~~~~~~~~~~L~L~~N~l~~~---~p~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l 518 (1008)
|.++++|+.|++++|.+++..|..+.. ...++.|+|++|++++. .+..+..+++|+.|+|++|.+++..|..|+.+
T Consensus 421 ~~~l~~L~~L~l~~n~l~~~~~~~~~~-l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l 499 (606)
T 3t6q_A 421 FQNLHLLKVLNLSHSLLDISSEQLFDG-LPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSL 499 (606)
T ss_dssp TTTCTTCCEEECTTCCCBTTCTTTTTT-CTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTC
T ss_pred hhCcccCCEEECCCCccCCcCHHHHhC-CCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccc
Confidence 778888888888888887544544433 34456788888887762 33567788888888888888887778888888
Q ss_pred cccceeeccCcccccchhhhhhccccccEEecCCCcccccccCc-ccccccceeecccCcccccCC
Q 045798 519 SSLEEIYLAGNLFHGSIPSFFNALKGVQKIDLSRNNLSGQIPIF-LEALSLEYLNLSFNDFEGKIP 583 (1008)
Q Consensus 519 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~-~~~~~L~~L~l~~N~l~g~~p 583 (1008)
++|++|+|++|++++.+|..|..++.| .|+|++|++++.+|.. ..+.+|+.|++++|++.+..+
T Consensus 500 ~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 564 (606)
T 3t6q_A 500 KMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCS 564 (606)
T ss_dssp TTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGG
T ss_pred cCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCC
Confidence 888888888888888888888888888 8888888888777765 556778888888888887665
No 6
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=1e-56 Score=544.31 Aligned_cols=531 Identities=20% Similarity=0.165 Sum_probs=459.3
Q ss_pred EeccccCCCCccCcCccCCccCCeeeecCCCCCCCCCccccCCCCCCEEEccCCCCCCccCcccccCcCcceEeeecccc
Q 045798 59 LDLMSKSLSGSLSPHLGNLSFLREINLSNNTIQGEIPPEFGRLFRLEALFLSNNSLVGKIPANLSYCSRLTVLCIEYNKL 138 (1008)
Q Consensus 59 l~l~~~~l~~~l~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l 138 (1008)
+|..+.+++ .+|..+.. .+++|+|++|.+++..|.+|.++++|++|+|++|++++..|..|+++++|++|+|++|++
T Consensus 17 ~~c~~~~l~-~iP~~l~~--~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l 93 (606)
T 3t6q_A 17 YNCENLGLN-EIPGTLPN--STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPL 93 (606)
T ss_dssp EECTTSCCS-SCCTTSCT--TCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred EECCCCCcc-cCcCCCCC--cCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcc
Confidence 334445555 56766654 689999999999988899999999999999999999988899999999999999999999
Q ss_pred ccCCCccccccCCCCeeecccccCCCCCCCCCccccccchhhcccccCCCCCCccccCCCCCcEEEecCCcccccCCccc
Q 045798 139 QGRIPLEFVSLSKLKDLSLAKNKLTGGIPPFLGNLTSLEVLSLAGNSFGRNIPDSLGQLKQLKILAIGGNNLSGPIPPSI 218 (1008)
Q Consensus 139 ~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 218 (1008)
++..|..|+++++|++|++++|++++..+..++++++|++|++++|++.+.....+..+++|++|++++|.+++..+..|
T Consensus 94 ~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 173 (606)
T 3t6q_A 94 IFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDM 173 (606)
T ss_dssp SEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHH
T ss_pred cccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhh
Confidence 98899999999999999999999997778889999999999999999987655556669999999999999998889999
Q ss_pred cCCCCcc--eeccccccccccCChhhhhcCCCCcEEEeccccCCCCCCcccccCCCCceeeccccc-----ccccccccc
Q 045798 219 YNLSFLV--VFSVSHNQIHGSLPPSLGLLLPNLKFFQIHHNFFSGSIPISLSNASKLEHIEIANNN-----FSGKLSVNF 291 (1008)
Q Consensus 219 ~~l~~L~--~L~ls~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~-----l~~~~~~~~ 291 (1008)
..+++|+ .|++++|.+.+..|.. +. ..+|+.|++++|. ..+..+..+.++....+.-+. ...+.+..|
T Consensus 174 ~~l~~L~~l~L~l~~n~l~~~~~~~-~~-~~~L~~L~l~~~~---~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~ 248 (606)
T 3t6q_A 174 SSLQQATNLSLNLNGNDIAGIEPGA-FD-SAVFQSLNFGGTQ---NLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVF 248 (606)
T ss_dssp HTTTTCCSEEEECTTCCCCEECTTT-TT-TCEEEEEECTTCS---CHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGG
T ss_pred hhhcccceeEEecCCCccCccChhH-hh-hccccccccCCch---hHHHHhhhccccchhheechhhccccccccChhHh
Confidence 9999999 8999999999655544 43 4689999999987 234445555544433333222 223334445
Q ss_pred cCCC--cccccccccccCCCCCCCcccccccccccCCCcEEEecCCcCCccCChhhhhhcccceeeeeccccccCCCCCc
Q 045798 292 GGMK--NLSLLNLQFSNLGSGESDEMGFMNSLTNCSKLRVLSLGGNQFRGALPHSIANLSSQLQILILSSNQFYGSIPLG 369 (1008)
Q Consensus 292 ~~l~--~L~~L~L~~n~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~ 369 (1008)
.++. +|+.|++++|+++.+... .+..+++|++|++++|+++ .+|..+..+. +|++|++++|.+++..|..
T Consensus 249 ~~l~~~~L~~L~l~~n~l~~~~~~------~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~-~L~~L~l~~n~l~~~~~~~ 320 (606)
T 3t6q_A 249 EGLCEMSVESINLQKHYFFNISSN------TFHCFSGLQELDLTATHLS-ELPSGLVGLS-TLKKLVLSANKFENLCQIS 320 (606)
T ss_dssp GGGGGSEEEEEECTTCCCSSCCTT------TTTTCTTCSEEECTTSCCS-CCCSSCCSCT-TCCEEECTTCCCSBGGGGC
T ss_pred chhhcCceeEEEeecCccCccCHH------HhccccCCCEEeccCCccC-CCChhhcccc-cCCEEECccCCcCcCchhh
Confidence 5554 799999999999876643 5788999999999999999 7888888876 5999999999999888899
Q ss_pred cccccccceEEecCccccCCcch-hccCCCCCceEEccCCcccccc--cccccCCCCcceeeccccccccccCCCCcCCC
Q 045798 370 IGNLVDLYLLGMVENQFTGAIPK-EMGKLQKLQGLDFSGNHFSGEI--PSSLGNLSSLYEVFFNNNNLSGVIPFSLGNLK 446 (1008)
Q Consensus 370 ~~~l~~L~~L~L~~n~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~--p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~ 446 (1008)
+..+++|+.|++++|.+.+.+|. .+..+++|++|+|++|.+++.. +..+..+++|++|++++|.+.+..|..|..++
T Consensus 321 ~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 400 (606)
T 3t6q_A 321 ASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECP 400 (606)
T ss_dssp GGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCT
T ss_pred hhccCcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCc
Confidence 99999999999999999976665 4999999999999999999766 78899999999999999999999999999999
Q ss_pred cccEeecccccccCCcchhhhhhhhhhhhhcccCccccCCCcccccccccccccccccccccC---CCCcccccccccce
Q 045798 447 RLAFLEMSGNELSGTIPEDIFNISYLSNSLNLARNHLVGIIPPRIGNLRALRSFDVSNNDLSG---EIPIELGHCSSLEE 523 (1008)
Q Consensus 447 ~L~~L~Ls~N~l~~~lp~~~~~~~~~~~~L~L~~N~l~~~~p~~~~~l~~L~~Ldls~N~l~~---~~p~~~~~l~~L~~ 523 (1008)
+|+.|++++|++++..|...+.....++.|+|++|.+.+..|..++.+++|+.|++++|.+++ ..+..+..+++|++
T Consensus 401 ~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~ 480 (606)
T 3t6q_A 401 QLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEI 480 (606)
T ss_dssp TCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCE
T ss_pred cCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccE
Confidence 999999999999987777766666777899999999999999999999999999999999986 23467999999999
Q ss_pred eeccCcccccchhhhhhccccccEEecCCCcccccccCc-ccccccceeecccCcccccCCCC-cccCCcccceeccCCc
Q 045798 524 IYLAGNLFHGSIPSFFNALKGVQKIDLSRNNLSGQIPIF-LEALSLEYLNLSFNDFEGKIPAK-GIFANASAISVVGCNR 601 (1008)
Q Consensus 524 L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~-~~~~~L~~L~l~~N~l~g~~p~~-~~~~~~~~~~~~~n~~ 601 (1008)
|+|++|++++.+|..|+.+++|+.|||++|++++.+|.. ..+..| .|++++|.+++.+|.. ..+.++..+.+.||++
T Consensus 481 L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~ 559 (606)
T 3t6q_A 481 LVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPL 559 (606)
T ss_dssp EECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCE
T ss_pred EECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCc
Confidence 999999999999999999999999999999999998877 667789 9999999999988864 3466778888999999
Q ss_pred cCCCC
Q 045798 602 LCGGI 606 (1008)
Q Consensus 602 l~g~~ 606 (1008)
.|.+.
T Consensus 560 ~c~c~ 564 (606)
T 3t6q_A 560 DCTCS 564 (606)
T ss_dssp ECSGG
T ss_pred cccCC
Confidence 98753
No 7
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=1.2e-55 Score=552.41 Aligned_cols=509 Identities=22% Similarity=0.209 Sum_probs=291.2
Q ss_pred ccCCeeeecCCCCCCCCCccccCCCCCCEEEccCCCCCCcc-CcccccCcCcceEeeeccccccCCCccccccCCCCeee
Q 045798 78 SFLREINLSNNTIQGEIPPEFGRLFRLEALFLSNNSLVGKI-PANLSYCSRLTVLCIEYNKLQGRIPLEFVSLSKLKDLS 156 (1008)
Q Consensus 78 ~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~-p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 156 (1008)
++|++|+|++|.+++..|.+|.++++|++|+|++|.+.+.+ |..|+++++|++|+|++|.+++..|..|.++++|++|+
T Consensus 24 ~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 103 (844)
T 3j0a_A 24 NTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELR 103 (844)
T ss_dssp TTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEE
T ss_pred CCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEee
Confidence 45566666666666555556666666666666666444344 55566666666666666666655566666666666666
Q ss_pred cccccCCCCCCCC--CccccccchhhcccccCCCCCC-ccccCCCCCcEEEecCCcccccCCccccCC--CCcceecccc
Q 045798 157 LAKNKLTGGIPPF--LGNLTSLEVLSLAGNSFGRNIP-DSLGQLKQLKILAIGGNNLSGPIPPSIYNL--SFLVVFSVSH 231 (1008)
Q Consensus 157 L~~n~l~~~~~~~--~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l--~~L~~L~ls~ 231 (1008)
|++|.+++.+|.. |+++++|++|+|++|.+.+..+ ..|+.+++|++|+|++|.+++..+..+..+ ++|+.|+++.
T Consensus 104 Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~ 183 (844)
T 3j0a_A 104 LYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAA 183 (844)
T ss_dssp CTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECC
T ss_pred CcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECCC
Confidence 6666665544433 5566666666666666654433 345666666666666666665555555555 5566666666
Q ss_pred ccccccCChhhhhc-----CCCCcEEEeccccCCCCCCcccccC---CCCceeecc---------cccccccccccccCC
Q 045798 232 NQIHGSLPPSLGLL-----LPNLKFFQIHHNFFSGSIPISLSNA---SKLEHIEIA---------NNNFSGKLSVNFGGM 294 (1008)
Q Consensus 232 N~l~~~lp~~~~~~-----l~~L~~L~L~~N~l~~~~p~~l~~l---~~L~~L~L~---------~N~l~~~~~~~~~~l 294 (1008)
|.+.+..|..+... ..+|+.|++++|.+.+..+..+... ++++.|.++ .+.+.+.....|.++
T Consensus 184 n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l 263 (844)
T 3j0a_A 184 NSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGL 263 (844)
T ss_dssp SBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTT
T ss_pred CccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhcc
Confidence 66655444432210 1135666666666555555544332 344444444 233333344444443
Q ss_pred --CcccccccccccCCCCCCCcccccccccccCCCcEEEecCCcCCccCChhhhhhcccceeeeeccccccCCCCCcccc
Q 045798 295 --KNLSLLNLQFSNLGSGESDEMGFMNSLTNCSKLRVLSLGGNQFRGALPHSIANLSSQLQILILSSNQFYGSIPLGIGN 372 (1008)
Q Consensus 295 --~~L~~L~L~~n~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~ 372 (1008)
++|+.|++++|.+..... ..+..+++|+.|+|++|++.+..|..+..+. +|++|+|++|.+++..|..+..
T Consensus 264 ~~~~L~~L~Ls~n~l~~~~~------~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~ 336 (844)
T 3j0a_A 264 ARSSVRHLDLSHGFVFSLNS------RVFETLKDLKVLNLAYNKINKIADEAFYGLD-NLQVLNLSYNLLGELYSSNFYG 336 (844)
T ss_dssp TTSCCCEEECTTCCCCEECS------CCSSSCCCCCEEEEESCCCCEECTTTTTTCS-SCCEEEEESCCCSCCCSCSCSS
T ss_pred ccCCccEEECCCCcccccCh------hhhhcCCCCCEEECCCCcCCCCChHHhcCCC-CCCEEECCCCCCCccCHHHhcC
Confidence 456666666666554322 2455566666666666666655555555554 4666666666666555666666
Q ss_pred ccccceEEecCccccCCcchhccCCCCCceEEccCCcccccccccccCCCCcceeeccccccccccCCCCcCCCcccEee
Q 045798 373 LVDLYLLGMVENQFTGAIPKEMGKLQKLQGLDFSGNHFSGEIPSSLGNLSSLYEVFFNNNNLSGVIPFSLGNLKRLAFLE 452 (1008)
Q Consensus 373 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 452 (1008)
+++|+.|++++|.+.+..+..|..+++|+.|+|++|.+++ ++ .+++|+.|++++|++. .+|.. ..+++.|+
T Consensus 337 l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~-i~----~~~~L~~L~l~~N~l~-~l~~~---~~~l~~L~ 407 (844)
T 3j0a_A 337 LPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTT-IH----FIPSIPDIFLSGNKLV-TLPKI---NLTANLIH 407 (844)
T ss_dssp CTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCC-CS----SCCSCSEEEEESCCCC-CCCCC---CTTCCEEE
T ss_pred CCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCc-cc----CCCCcchhccCCCCcc-ccccc---ccccceee
Confidence 6666666666666665555566666666666666666652 22 2556666666666666 33332 34566666
Q ss_pred cccccccCCcchhh-hhhhhhhhhhcccCccccCCCcc-ccccccccccccccccccc-----CCCCcccccccccceee
Q 045798 453 MSGNELSGTIPEDI-FNISYLSNSLNLARNHLVGIIPP-RIGNLRALRSFDVSNNDLS-----GEIPIELGHCSSLEEIY 525 (1008)
Q Consensus 453 Ls~N~l~~~lp~~~-~~~~~~~~~L~L~~N~l~~~~p~-~~~~l~~L~~Ldls~N~l~-----~~~p~~~~~l~~L~~L~ 525 (1008)
+++|++++ ++... ......++.|+|++|++++..+. .+..+++|+.|+|++|.++ +..|..|..+++|++|+
T Consensus 408 ls~N~l~~-l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~ 486 (844)
T 3j0a_A 408 LSENRLEN-LDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLY 486 (844)
T ss_dssp CCSCCCCS-STTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCC
T ss_pred cccCcccc-CchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEE
Confidence 66666653 32211 11223345666666666654332 2444566666666666665 33344566666666666
Q ss_pred ccCcccccchhhhhhccccccEEecCCCcccccccCcccccccceeecccCcccccCCCCcccCCcccceeccCCccCCC
Q 045798 526 LAGNLFHGSIPSFFNALKGVQKIDLSRNNLSGQIPIFLEALSLEYLNLSFNDFEGKIPAKGIFANASAISVVGCNRLCGG 605 (1008)
Q Consensus 526 L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~L~~L~l~~N~l~g~~p~~~~~~~~~~~~~~~n~~l~g~ 605 (1008)
|++|+|++.+|..|..+++|+.|+|++|+|++..|.... .+|+.|+|++|.|+|.+|.. |.++..+.+.||++.|+|
T Consensus 487 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~-~~L~~L~Ls~N~l~~~~~~~--~~~L~~l~l~~Np~~C~c 563 (844)
T 3j0a_A 487 LNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP-ANLEILDISRNQLLAPNPDV--FVSLSVLDITHNKFICEC 563 (844)
T ss_dssp CCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC-SCCCEEEEEEECCCCCCSCC--CSSCCEEEEEEECCCCSS
T ss_pred CCCCcccccChhHccchhhhheeECCCCCCCccChhhhh-ccccEEECCCCcCCCCChhH--hCCcCEEEecCCCccccc
Confidence 666666666666666666666666666666665544433 55666666666666666643 445556666666666655
Q ss_pred C
Q 045798 606 I 606 (1008)
Q Consensus 606 ~ 606 (1008)
.
T Consensus 564 ~ 564 (844)
T 3j0a_A 564 E 564 (844)
T ss_dssp S
T ss_pred c
Confidence 3
No 8
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=2.4e-55 Score=539.61 Aligned_cols=523 Identities=20% Similarity=0.223 Sum_probs=456.7
Q ss_pred CeEEEEeccccCCCCccCcCccCCccCCeeeecCCCCCCCCCccccCCCCCCEEEccCCCCCCccCcccccCcCcceEee
Q 045798 54 RRVTALDLMSKSLSGSLSPHLGNLSFLREINLSNNTIQGEIPPEFGRLFRLEALFLSNNSLVGKIPANLSYCSRLTVLCI 133 (1008)
Q Consensus 54 ~~v~~l~l~~~~l~~~l~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L 133 (1008)
..++.|||++|.+++..|..++.+++|++|+|++|++++..+.+|.++++|++|+|++|++++..|..|+++++|++|+|
T Consensus 49 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 128 (680)
T 1ziw_A 49 SQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDL 128 (680)
T ss_dssp TTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEEC
T ss_pred CcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEEC
Confidence 46899999999999888889999999999999999999666668999999999999999999888889999999999999
Q ss_pred eccccccCCCccccccCCCCeeecccccCCCCCCCCCc--cccccchhhcccccCCCCCCccccCC--------------
Q 045798 134 EYNKLQGRIPLEFVSLSKLKDLSLAKNKLTGGIPPFLG--NLTSLEVLSLAGNSFGRNIPDSLGQL-------------- 197 (1008)
Q Consensus 134 s~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~--~l~~L~~L~L~~n~l~~~~~~~~~~l-------------- 197 (1008)
++|.+++..|..+.++++|++|++++|++++..+..+. .+++|++|++++|++++..|..|..+
T Consensus 129 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~ 208 (680)
T 1ziw_A 129 SHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLG 208 (680)
T ss_dssp CSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCH
T ss_pred CCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccC
Confidence 99999999999999999999999999999976666554 45899999999999998888877654
Q ss_pred -------------CCCcEEEecCCcccccCCccccCCCC--cceeccccccccccCChhhhhcCCCCcEEEeccccCCCC
Q 045798 198 -------------KQLKILAIGGNNLSGPIPPSIYNLSF--LVVFSVSHNQIHGSLPPSLGLLLPNLKFFQIHHNFFSGS 262 (1008)
Q Consensus 198 -------------~~L~~L~L~~n~l~~~~~~~~~~l~~--L~~L~ls~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~ 262 (1008)
++|+.|++++|.+++..|.+|.+++. |+.|++++|++++..|. .+..+++|++|+|++|.+.+.
T Consensus 209 ~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~-~~~~l~~L~~L~L~~n~l~~~ 287 (680)
T 1ziw_A 209 PSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGND-SFAWLPQLEYFFLEYNNIQHL 287 (680)
T ss_dssp HHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEECTT-TTTTCTTCCEEECCSCCBSEE
T ss_pred hhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccCcc-cccCcccccEeeCCCCccCcc
Confidence 56788899999999999999998866 99999999999854444 455689999999999999999
Q ss_pred CCcccccCCCCceeecccccccc---------cccccccCCCcccccccccccCCCCCCCcccccccccccCCCcEEEec
Q 045798 263 IPISLSNASKLEHIEIANNNFSG---------KLSVNFGGMKNLSLLNLQFSNLGSGESDEMGFMNSLTNCSKLRVLSLG 333 (1008)
Q Consensus 263 ~p~~l~~l~~L~~L~L~~N~l~~---------~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~l~~L~~L~Ls 333 (1008)
.|..+..+++|++|++++|...+ +....|..+++|+.|++++|++...... .+..+++|++|+++
T Consensus 288 ~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~------~~~~l~~L~~L~Ls 361 (680)
T 1ziw_A 288 FSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSN------MFTGLINLKYLSLS 361 (680)
T ss_dssp CTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCCTT------TTTTCTTCCEEECT
T ss_pred ChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCCChh------HhccccCCcEEECC
Confidence 99999999999999999886543 2234788999999999999999876543 57889999999999
Q ss_pred CCcCCcc-CC-hhhhhhc-ccceeeeeccccccCCCCCccccccccceEEecCccccCCcc-hhccCCCCCceEEccCCc
Q 045798 334 GNQFRGA-LP-HSIANLS-SQLQILILSSNQFYGSIPLGIGNLVDLYLLGMVENQFTGAIP-KEMGKLQKLQGLDFSGNH 409 (1008)
Q Consensus 334 ~N~l~~~-~p-~~~~~l~-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~Ls~N~ 409 (1008)
+|.+... ++ ..+..+. +.|+.|++++|++++..|..+..+++|+.|++++|.+.+.+| ..|..+++|++|+|++|+
T Consensus 362 ~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~ 441 (680)
T 1ziw_A 362 NSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNK 441 (680)
T ss_dssp TCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCS
T ss_pred CCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCC
Confidence 9985422 22 2233322 369999999999999999999999999999999999987665 789999999999999999
Q ss_pred ccccccccccCCCCcceeeccccccc--cccCCCCcCCCcccEeecccccccCCcchhhhhhhhhhhhhcccCccccCCC
Q 045798 410 FSGEIPSSLGNLSSLYEVFFNNNNLS--GVIPFSLGNLKRLAFLEMSGNELSGTIPEDIFNISYLSNSLNLARNHLVGII 487 (1008)
Q Consensus 410 l~~~~p~~~~~l~~L~~L~l~~N~l~--~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~~~~~~~~~~~~L~L~~N~l~~~~ 487 (1008)
+.+..+..|..+++|+.|++++|.+. +..|..|.++++|+.|+|++|+++ .+|...+.....++.|+|++|++++..
T Consensus 442 l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~l~~L~~L~Ls~N~l~~~~ 520 (680)
T 1ziw_A 442 YLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIA-NINDDMLEGLEKLEILDLQHNNLARLW 520 (680)
T ss_dssp EEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCGGGG
T ss_pred cceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCC-cCChhhhccccccCEEeCCCCCccccc
Confidence 99888999999999999999999987 568999999999999999999999 577776666677789999999998642
Q ss_pred c--------ccccccccccccccccccccCCCCcccccccccceeeccCcccccchhhhhhccccccEEecCCCcccccc
Q 045798 488 P--------PRIGNLRALRSFDVSNNDLSGEIPIELGHCSSLEEIYLAGNLFHGSIPSFFNALKGVQKIDLSRNNLSGQI 559 (1008)
Q Consensus 488 p--------~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~ 559 (1008)
+ ..|+++++|+.|+|++|.++...+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|++++..
T Consensus 521 ~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~ 600 (680)
T 1ziw_A 521 KHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVE 600 (680)
T ss_dssp STTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCC
T ss_pred hhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccC
Confidence 2 24789999999999999999444446899999999999999999877788999999999999999999988
Q ss_pred cCcc--cccccceeecccCcccccCCC
Q 045798 560 PIFL--EALSLEYLNLSFNDFEGKIPA 584 (1008)
Q Consensus 560 p~~~--~~~~L~~L~l~~N~l~g~~p~ 584 (1008)
|... .+.+|+.|++++|++.+..+.
T Consensus 601 ~~~~~~~~~~L~~l~l~~N~~~c~c~~ 627 (680)
T 1ziw_A 601 KKVFGPAFRNLTELDMRFNPFDCTCES 627 (680)
T ss_dssp HHHHHHHHTTCSEEECTTCCCCBCCCC
T ss_pred hhHhcccccccCEEEccCCCcccCCcc
Confidence 7653 577899999999999998764
No 9
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=3.4e-55 Score=530.92 Aligned_cols=527 Identities=19% Similarity=0.156 Sum_probs=287.7
Q ss_pred EeccccCCCCccCcCccCCccCCeeeecCCCCCCCCCccccCCCCCCEEEccCCCCCCccCcccccCcCcceEeeecccc
Q 045798 59 LDLMSKSLSGSLSPHLGNLSFLREINLSNNTIQGEIPPEFGRLFRLEALFLSNNSLVGKIPANLSYCSRLTVLCIEYNKL 138 (1008)
Q Consensus 59 l~l~~~~l~~~l~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l 138 (1008)
+|.++++++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|++++..|..|+++++|++|+|++|++
T Consensus 16 ~~c~~~~l~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l 92 (606)
T 3vq2_A 16 YQCMDQKLS-KVPDDIP--SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPI 92 (606)
T ss_dssp EECTTSCCS-SCCTTSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred eEccCCCcc-cCCCCCC--CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcc
Confidence 445555555 4555544 5677777777777766666777777777777777777766677777777777777777777
Q ss_pred ccCCCccccccCCCCeeecccccCCCCCCCCCccccccchhhcccccCCC-CCCccccCCCCCcEEEecCCcccccCCcc
Q 045798 139 QGRIPLEFVSLSKLKDLSLAKNKLTGGIPPFLGNLTSLEVLSLAGNSFGR-NIPDSLGQLKQLKILAIGGNNLSGPIPPS 217 (1008)
Q Consensus 139 ~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 217 (1008)
++..|..|+++++|++|+|++|++++..+..++++++|++|++++|.+.+ .+|..|+++++|++|++++|++++..+..
T Consensus 93 ~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~ 172 (606)
T 3vq2_A 93 QSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVND 172 (606)
T ss_dssp CCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTT
T ss_pred cccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhh
Confidence 76667777777777777777777776655667777777777777777754 45777777777777777777777766666
Q ss_pred ccCCCCcc----eeccccccccccCChhhhhcCCCCcEEEeccccCC-CCCCcccccCCCCceeeccccccccc------
Q 045798 218 IYNLSFLV----VFSVSHNQIHGSLPPSLGLLLPNLKFFQIHHNFFS-GSIPISLSNASKLEHIEIANNNFSGK------ 286 (1008)
Q Consensus 218 ~~~l~~L~----~L~ls~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~-~~~p~~l~~l~~L~~L~L~~N~l~~~------ 286 (1008)
|..+++|+ +|++++|.++ .++...+... +|+.|++++|.+. +..|..+.++++|+.+++..+.+.+.
T Consensus 173 ~~~l~~L~~~l~~L~l~~n~l~-~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~ 250 (606)
T 3vq2_A 173 LQFLRENPQVNLSLDMSLNPID-FIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIF 250 (606)
T ss_dssp THHHHHCTTCCCEEECTTCCCC-EECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCC
T ss_pred hhhhhccccccceeeccCCCcc-eeCcccccCc-eeeeeeccCCccchhHHHHHhccccccccccccccccccCCccccc
Confidence 66666554 6777777776 5555555433 6777777777765 34555666666666666543333211
Q ss_pred ccccccCCCc--cccccc-ccccCCCCCCCcccccccccccCCCcEEEecCCcCCccCChhhhhhcccceeeeecccccc
Q 045798 287 LSVNFGGMKN--LSLLNL-QFSNLGSGESDEMGFMNSLTNCSKLRVLSLGGNQFRGALPHSIANLSSQLQILILSSNQFY 363 (1008)
Q Consensus 287 ~~~~~~~l~~--L~~L~L-~~n~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~ 363 (1008)
....+.++.. ++.+++ ..|.+.. ..+ .+..+++|+.|++++|.+. .+| .+..+. +|++|++++|.+
T Consensus 251 ~~~~~~~l~~l~l~~l~l~~~~~~~~------~~~-~~~~l~~L~~L~l~~~~~~-~l~-~l~~~~-~L~~L~l~~n~l- 319 (606)
T 3vq2_A 251 EPSIMEGLCDVTIDEFRLTYTNDFSD------DIV-KFHCLANVSAMSLAGVSIK-YLE-DVPKHF-KWQSLSIIRCQL- 319 (606)
T ss_dssp CGGGGTTGGGSEEEEEEECCCTTCCG------GGG-SCGGGTTCSEEEEESCCCC-CCC-CCCTTC-CCSEEEEESCCC-
T ss_pred ChHHhhhhhhccHhheeccccccccc------ccc-ccccCCCCCEEEecCccch-hhh-hccccc-cCCEEEcccccC-
Confidence 1111111111 111111 1111111 111 1444455555555555554 333 333332 355555555555
Q ss_pred CCCCCccccccccceEEecCccccCCcchhccCCCCCceEEccCCccccc--ccccccCCCCcceeeccccccccccCCC
Q 045798 364 GSIPLGIGNLVDLYLLGMVENQFTGAIPKEMGKLQKLQGLDFSGNHFSGE--IPSSLGNLSSLYEVFFNNNNLSGVIPFS 441 (1008)
Q Consensus 364 ~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~--~p~~~~~l~~L~~L~l~~N~l~~~~p~~ 441 (1008)
+.+| .+ .+++|+.|++++|+..+.. .+..+++|++|+|++|++++. +|..+..+++|++|++++|.+.+ +|..
T Consensus 320 ~~lp-~~-~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~ 394 (606)
T 3vq2_A 320 KQFP-TL-DLPFLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSAN 394 (606)
T ss_dssp SSCC-CC-CCSSCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCC
T ss_pred cccc-cC-CCCccceeeccCCcCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhh
Confidence 3444 22 4555555555555333222 344455555555555555433 24444455555555555555442 3344
Q ss_pred CcCCCcccEeecccccccCCcchhhhhhhhhhhhhcccCccccCCCcccccccccccccccccccccC-CCCcccccccc
Q 045798 442 LGNLKRLAFLEMSGNELSGTIPEDIFNISYLSNSLNLARNHLVGIIPPRIGNLRALRSFDVSNNDLSG-EIPIELGHCSS 520 (1008)
Q Consensus 442 ~~~l~~L~~L~Ls~N~l~~~lp~~~~~~~~~~~~L~L~~N~l~~~~p~~~~~l~~L~~Ldls~N~l~~-~~p~~~~~l~~ 520 (1008)
|..+++|+.|++++|++++..|...+.....++.|++++|.+.+..|..++.+++|+.|++++|.+++ .+|..++.+++
T Consensus 395 ~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~ 474 (606)
T 3vq2_A 395 FMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTN 474 (606)
T ss_dssp CTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTT
T ss_pred ccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCC
Confidence 55555555555555555443332333333334455555555555555555555555555555555554 24555555555
Q ss_pred cceeeccCcccccchhhhhhccccccEEecCCCcccccccCc-ccccccceeecccCcccccCCCCcccC-Ccccceecc
Q 045798 521 LEEIYLAGNLFHGSIPSFFNALKGVQKIDLSRNNLSGQIPIF-LEALSLEYLNLSFNDFEGKIPAKGIFA-NASAISVVG 598 (1008)
Q Consensus 521 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~-~~~~~L~~L~l~~N~l~g~~p~~~~~~-~~~~~~~~~ 598 (1008)
|++|+|++|++++.+|..|..+++|+.|+|++|++++.+|.. ..+.+|++|++++|+++..++....+. ++..+.+.+
T Consensus 475 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~p~~~~~l~~~L~~l~l~~ 554 (606)
T 3vq2_A 475 LTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTN 554 (606)
T ss_dssp CCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCCEESCGGGSCTTCCEEECCS
T ss_pred CCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCcccCHhHhhhcccCcEEEccC
Confidence 555555555555555555555555555555555555554443 334455555555555553222222222 244444555
Q ss_pred CCccCCCC
Q 045798 599 CNRLCGGI 606 (1008)
Q Consensus 599 n~~l~g~~ 606 (1008)
|++.|++.
T Consensus 555 N~~~c~c~ 562 (606)
T 3vq2_A 555 NSVACICE 562 (606)
T ss_dssp CCCCCSST
T ss_pred CCcccCCc
Confidence 55555443
No 10
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=3.8e-55 Score=536.03 Aligned_cols=507 Identities=18% Similarity=0.186 Sum_probs=344.9
Q ss_pred hhccCChhhHHHHHHHHHhhccCCCCCCCCCCCCC-----CC--Ccc------------cceEEcCCCCeEEEEeccccC
Q 045798 5 QVAALEDGDRAALQAFKSMIAHEPQGILNSWNDSR-----HF--CEW------------EGITCGRRHRRVTALDLMSKS 65 (1008)
Q Consensus 5 ~~~~~~~~~~~~l~~~k~~~~~~~~~~~~~w~~~~-----~~--c~w------------~gv~c~~~~~~v~~l~l~~~~ 65 (1008)
.++++..+|++||++||+++. +| +|+.+. ++ |.| .||+|+. .++|+.|+|++++
T Consensus 262 ~~~~~~~~d~~ALl~~k~~l~-~~-----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~-~~~V~~L~Ls~~~ 334 (876)
T 4ecn_A 262 KETAEYIKDYKALKAIWEALD-GK-----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDN-NGRVTGLSLAGFG 334 (876)
T ss_dssp CCCCHHHHHHHHHHHHHHHTT-GG-----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECT-TSCEEEEECTTTC
T ss_pred cccccchHHHHHHHHHHHHcC-CC-----CCCcCCCcccccCCccccccccccccccCcCceEecC-CCCEEEEECccCC
Confidence 355677889999999999995 55 676543 44 999 9999986 5899999999999
Q ss_pred CCCccCcCccCCccCCeeee-cCCCCCCCCCccccCCC-CCCE--------------EE-ccCCCCCC-----------c
Q 045798 66 LSGSLSPHLGNLSFLREINL-SNNTIQGEIPPEFGRLF-RLEA--------------LF-LSNNSLVG-----------K 117 (1008)
Q Consensus 66 l~~~l~~~l~~l~~L~~L~L-~~n~~~~~~p~~~~~l~-~L~~--------------L~-Ls~n~l~~-----------~ 117 (1008)
+.|.+|++++.|++|++|+| ++|.++|..|....... .+.. ++ .....+.+ .
T Consensus 335 L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~ 414 (876)
T 4ecn_A 335 AKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEM 414 (876)
T ss_dssp CEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTS
T ss_pred CCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccc
Confidence 99999999999999999999 88888776442211110 0000 00 00000000 0
Q ss_pred cCcccccCcCcceEeeec--cccccCCCccccccCCCCeeecccccCCC-----------------CCCCCCc--ccccc
Q 045798 118 IPANLSYCSRLTVLCIEY--NKLQGRIPLEFVSLSKLKDLSLAKNKLTG-----------------GIPPFLG--NLTSL 176 (1008)
Q Consensus 118 ~p~~l~~l~~L~~L~Ls~--n~l~~~~p~~~~~l~~L~~L~L~~n~l~~-----------------~~~~~~~--~l~~L 176 (1008)
.+........++.+.+.. |++++ +|..|+++++|++|+|++|++++ .+|..++ ++++|
T Consensus 415 ~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L 493 (876)
T 4ecn_A 415 KPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDL 493 (876)
T ss_dssp CCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTC
T ss_pred cccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCC
Confidence 000011112222222222 44554 45555555555555555555554 2566655 66666
Q ss_pred chhhcccccCCCCCCccccCCCCCcEEEecCCc-ccc-cCCccccCCC-------CcceeccccccccccCCh-hhhhcC
Q 045798 177 EVLSLAGNSFGRNIPDSLGQLKQLKILAIGGNN-LSG-PIPPSIYNLS-------FLVVFSVSHNQIHGSLPP-SLGLLL 246 (1008)
Q Consensus 177 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~-l~~-~~~~~~~~l~-------~L~~L~ls~N~l~~~lp~-~~~~~l 246 (1008)
++|+|++|++.+.+|..|+.+++|+.|+|++|+ +++ .+|..+..++ +|+.|+|++|+++ .+|. ..+..+
T Consensus 494 ~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L 572 (876)
T 4ecn_A 494 TDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKM 572 (876)
T ss_dssp CEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTC
T ss_pred CEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcC
Confidence 666666666666666666666666666666665 665 5555444443 6666666666666 6665 223336
Q ss_pred CCCcEEEeccccCCCCCCcccccCCCCceeecccccccccccccccCCCc-ccccccccccCCCCCCCccccccccccc-
Q 045798 247 PNLKFFQIHHNFFSGSIPISLSNASKLEHIEIANNNFSGKLSVNFGGMKN-LSLLNLQFSNLGSGESDEMGFMNSLTNC- 324 (1008)
Q Consensus 247 ~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~-L~~L~L~~n~l~~~~~~~~~~~~~l~~l- 324 (1008)
++|+.|+|++|.+. .+| .+.++++|+.|++++|++. ..|..+.++++ |+.|+|++|+++.++ ..+..+
T Consensus 573 ~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~~lp-------~~~~~~~ 642 (876)
T 4ecn_A 573 VKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLKYIP-------NIFNAKS 642 (876)
T ss_dssp TTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCCSCC-------SCCCTTC
T ss_pred CCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCCcCc-------hhhhccc
Confidence 66666666666666 555 6666667777777777666 45555666666 777777776665432 123333
Q ss_pred -CCCcEEEecCCcCCccCChhh---hhhc-ccceeeeeccccccCCCCCcc-ccccccceEEecCccccCCcchhccC--
Q 045798 325 -SKLRVLSLGGNQFRGALPHSI---ANLS-SQLQILILSSNQFYGSIPLGI-GNLVDLYLLGMVENQFTGAIPKEMGK-- 396 (1008)
Q Consensus 325 -~~L~~L~Ls~N~l~~~~p~~~---~~l~-~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~L~~n~l~~~~~~~~~~-- 396 (1008)
++|+.|+|++|++.+.+|... ..+. .+|+.|+|++|.++ .+|..+ ..+++|+.|+|++|+++ .+|..+..
T Consensus 643 ~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~ 720 (876)
T 4ecn_A 643 VYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQ-KFPTELFATGSPISTIILSNNLMT-SIPENSLKPK 720 (876)
T ss_dssp SSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCC-SCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCT
T ss_pred cCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCC-ccCHHHHccCCCCCEEECCCCcCC-ccChHHhccc
Confidence 347788888888776555322 1111 25888888888888 556554 47788888888888888 55554433
Q ss_pred ------CCCCceEEccCCccccccccccc--CCCCcceeeccccccccccCCCCcCCCcccEeecccccccCCcchhhhh
Q 045798 397 ------LQKLQGLDFSGNHFSGEIPSSLG--NLSSLYEVFFNNNNLSGVIPFSLGNLKRLAFLEMSGNELSGTIPEDIFN 468 (1008)
Q Consensus 397 ------l~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~~~~~ 468 (1008)
+++|+.|+|++|+++ .+|..+. .+++|+.|+|++|.+++ +|..+.++++|+.|+|++|+
T Consensus 721 ~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~----------- 787 (876)
T 4ecn_A 721 DGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQR----------- 787 (876)
T ss_dssp TSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCB-----------
T ss_pred cccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCC-----------
Confidence 238999999999998 7888887 89999999999999997 78889999999999999987
Q ss_pred hhhhhhhhcccCccccCCCcccccccccccccccccccccCCCCcccccccccceeeccCcccccchhhhhhccccccEE
Q 045798 469 ISYLSNSLNLARNHLVGIIPPRIGNLRALRSFDVSNNDLSGEIPIELGHCSSLEEIYLAGNLFHGSIPSFFNALKGVQKI 548 (1008)
Q Consensus 469 ~~~~~~~L~L~~N~l~~~~p~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 548 (1008)
++++|++.+.+|..|+.+++|+.|+|++|++ +.+|..+. ++|+.|+|++|++...-+..+.....+..+
T Consensus 788 --------~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~l~~i~~~~~~~~~~~~~~ 856 (876)
T 4ecn_A 788 --------DAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILDIADNPNISIDVTSVCPYIEAGMY 856 (876)
T ss_dssp --------CTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEECCSCTTCEEECGGGHHHHHTTCC
T ss_pred --------CcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEECCCCCCCccChHHccccccchhe
Confidence 4577888888999999999999999999999 58888876 689999999998887667777777777777
Q ss_pred ecCCCccc
Q 045798 549 DLSRNNLS 556 (1008)
Q Consensus 549 ~ls~N~l~ 556 (1008)
.|++|++.
T Consensus 857 ~L~~n~~~ 864 (876)
T 4ecn_A 857 VLLYDKTQ 864 (876)
T ss_dssp EEECCTTS
T ss_pred eecCCCcc
Confidence 88777665
No 11
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=4.7e-54 Score=537.87 Aligned_cols=521 Identities=19% Similarity=0.201 Sum_probs=453.0
Q ss_pred CcccceEEcCCCCeEEEEeccccCCCCccCcCccCCccCCeeeecCCCCCCCC-CccccCCCCCCEEEccCCCCCCccCc
Q 045798 42 CEWEGITCGRRHRRVTALDLMSKSLSGSLSPHLGNLSFLREINLSNNTIQGEI-PPEFGRLFRLEALFLSNNSLVGKIPA 120 (1008)
Q Consensus 42 c~w~gv~c~~~~~~v~~l~l~~~~l~~~l~~~l~~l~~L~~L~L~~n~~~~~~-p~~~~~l~~L~~L~Ls~n~l~~~~p~ 120 (1008)
|.|..|.+ -...++.|||++|.+++..+..+..+++|++|+|++|.+.+.+ |.+|.++++|++|+|++|.+++..|.
T Consensus 14 ~~L~~vP~--lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~ 91 (844)
T 3j0a_A 14 CNLTQVPQ--VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPD 91 (844)
T ss_dssp CCSSCCCS--SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTT
T ss_pred CCCCCCCC--CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHh
Confidence 45666665 4568999999999999888999999999999999999666565 78999999999999999999988899
Q ss_pred ccccCcCcceEeeeccccccCCCcc--ccccCCCCeeecccccCCCCCC-CCCccccccchhhcccccCCCCCCccccCC
Q 045798 121 NLSYCSRLTVLCIEYNKLQGRIPLE--FVSLSKLKDLSLAKNKLTGGIP-PFLGNLTSLEVLSLAGNSFGRNIPDSLGQL 197 (1008)
Q Consensus 121 ~l~~l~~L~~L~Ls~n~l~~~~p~~--~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 197 (1008)
.|+++++|++|+|++|.+++.+|.. |.++++|++|+|++|.+++..+ ..|+++++|++|+|++|.+++..+..|..+
T Consensus 92 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l 171 (844)
T 3j0a_A 92 AFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPL 171 (844)
T ss_dssp SSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHH
T ss_pred HccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccc
Confidence 9999999999999999999866665 9999999999999999997655 579999999999999999999999999988
Q ss_pred --CCCcEEEecCCcccccCCccccCCCC------cceeccccccccccCChhhhhcC--CCCcEEEeccc---------c
Q 045798 198 --KQLKILAIGGNNLSGPIPPSIYNLSF------LVVFSVSHNQIHGSLPPSLGLLL--PNLKFFQIHHN---------F 258 (1008)
Q Consensus 198 --~~L~~L~L~~n~l~~~~~~~~~~l~~------L~~L~ls~N~l~~~lp~~~~~~l--~~L~~L~L~~N---------~ 258 (1008)
++|+.|++++|.+.+..|..+..+++ |+.|++++|.+.+.++..+...+ .+++.|.++++ .
T Consensus 172 ~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~ 251 (844)
T 3j0a_A 172 QGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHN 251 (844)
T ss_dssp HHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSS
T ss_pred cCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccc
Confidence 89999999999999988888877766 99999999999988888776643 57888888743 3
Q ss_pred CCCCCCcccccC--CCCceeecccccccccccccccCCCcccccccccccCCCCCCCcccccccccccCCCcEEEecCCc
Q 045798 259 FSGSIPISLSNA--SKLEHIEIANNNFSGKLSVNFGGMKNLSLLNLQFSNLGSGESDEMGFMNSLTNCSKLRVLSLGGNQ 336 (1008)
Q Consensus 259 l~~~~p~~l~~l--~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~ 336 (1008)
+.+..+..+..+ ++|+.|++++|.+.+..+..|..+++|+.|+|++|++..... ..+..+++|++|+|++|+
T Consensus 252 l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~------~~~~~l~~L~~L~Ls~N~ 325 (844)
T 3j0a_A 252 IKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIAD------EAFYGLDNLQVLNLSYNL 325 (844)
T ss_dssp STTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECT------TTTTTCSSCCEEEEESCC
T ss_pred cCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCCh------HHhcCCCCCCEEECCCCC
Confidence 333344455544 789999999999999999999999999999999999986543 367889999999999999
Q ss_pred CCccCChhhhhhcccceeeeeccccccCCCCCccccccccceEEecCccccCCcchhccCCCCCceEEccCCcccccccc
Q 045798 337 FRGALPHSIANLSSQLQILILSSNQFYGSIPLGIGNLVDLYLLGMVENQFTGAIPKEMGKLQKLQGLDFSGNHFSGEIPS 416 (1008)
Q Consensus 337 l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 416 (1008)
+++..|..+..+. +|++|+|++|.+.+..+..|..+++|+.|+|++|.+++. ..+++|+.|++++|+++ .+|.
T Consensus 326 l~~~~~~~~~~l~-~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i-----~~~~~L~~L~l~~N~l~-~l~~ 398 (844)
T 3j0a_A 326 LGELYSSNFYGLP-KVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTI-----HFIPSIPDIFLSGNKLV-TLPK 398 (844)
T ss_dssp CSCCCSCSCSSCT-TCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCC-----SSCCSCSEEEEESCCCC-CCCC
T ss_pred CCccCHHHhcCCC-CCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcc-----cCCCCcchhccCCCCcc-cccc
Confidence 9988888888886 599999999999988888899999999999999999853 33889999999999998 5665
Q ss_pred cccCCCCcceeeccccccccccC-CCCcCCCcccEeecccccccCCcchhhhhhhhhhhhhcccCcccc-----CCCccc
Q 045798 417 SLGNLSSLYEVFFNNNNLSGVIP-FSLGNLKRLAFLEMSGNELSGTIPEDIFNISYLSNSLNLARNHLV-----GIIPPR 490 (1008)
Q Consensus 417 ~~~~l~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~lp~~~~~~~~~~~~L~L~~N~l~-----~~~p~~ 490 (1008)
. ..+++.|++++|++.+... ..+.++++|+.|+|++|++++..+...+.....++.|+|++|.++ +..|..
T Consensus 399 ~---~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~ 475 (844)
T 3j0a_A 399 I---NLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDV 475 (844)
T ss_dssp C---CTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSC
T ss_pred c---ccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhh
Confidence 4 4678999999999996422 235689999999999999996555545555667789999999997 455677
Q ss_pred ccccccccccccccccccCCCCcccccccccceeeccCcccccchhhhhhccccccEEecCCCcccccccCcccccccce
Q 045798 491 IGNLRALRSFDVSNNDLSGEIPIELGHCSSLEEIYLAGNLFHGSIPSFFNALKGVQKIDLSRNNLSGQIPIFLEALSLEY 570 (1008)
Q Consensus 491 ~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~L~~ 570 (1008)
|..+++|+.|||++|.+++..|..|..+++|++|+|++|+|++.+|..+. ++|+.|||++|+|++.+|... .+|+.
T Consensus 476 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~--~~L~~ 551 (844)
T 3j0a_A 476 FEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDVF--VSLSV 551 (844)
T ss_dssp SSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCCC--SSCCE
T ss_pred hcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhHh--CCcCE
Confidence 99999999999999999998899999999999999999999987777776 899999999999999988764 47999
Q ss_pred eecccCcccccCCC
Q 045798 571 LNLSFNDFEGKIPA 584 (1008)
Q Consensus 571 L~l~~N~l~g~~p~ 584 (1008)
|++++|++.+..+.
T Consensus 552 l~l~~Np~~C~c~~ 565 (844)
T 3j0a_A 552 LDITHNKFICECEL 565 (844)
T ss_dssp EEEEEECCCCSSSC
T ss_pred EEecCCCccccccc
Confidence 99999999998764
No 12
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=9.1e-54 Score=518.37 Aligned_cols=507 Identities=19% Similarity=0.169 Sum_probs=433.5
Q ss_pred CCeeeecCCCCCCCCCccccCCCCCCEEEccCCCCCCccCcccccCcCcceEeeeccccccCCCccccccCCCCeeeccc
Q 045798 80 LREINLSNNTIQGEIPPEFGRLFRLEALFLSNNSLVGKIPANLSYCSRLTVLCIEYNKLQGRIPLEFVSLSKLKDLSLAK 159 (1008)
Q Consensus 80 L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~ 159 (1008)
.++++.++++++ .+|..+. ++|++|+|++|++++..+..|+++++|++|+|++|++++..|..|.++++|++|+|++
T Consensus 13 ~~~~~c~~~~l~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~ 89 (606)
T 3vq2_A 13 NITYQCMDQKLS-KVPDDIP--SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTG 89 (606)
T ss_dssp TTEEECTTSCCS-SCCTTSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTT
T ss_pred CCceEccCCCcc-cCCCCCC--CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCC
Confidence 468999999999 7777665 8999999999999988888999999999999999999988899999999999999999
Q ss_pred ccCCCCCCCCCccccccchhhcccccCCCCCCccccCCCCCcEEEecCCcccc-cCCccccCCCCcceeccccccccccC
Q 045798 160 NKLTGGIPPFLGNLTSLEVLSLAGNSFGRNIPDSLGQLKQLKILAIGGNNLSG-PIPPSIYNLSFLVVFSVSHNQIHGSL 238 (1008)
Q Consensus 160 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~ls~N~l~~~l 238 (1008)
|++++..|..|+++++|++|+|++|++++..+..|+.+++|++|++++|.+++ .+|..|.++++|++|++++|++++..
T Consensus 90 n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~ 169 (606)
T 3vq2_A 90 NPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTIT 169 (606)
T ss_dssp CCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEEC
T ss_pred CcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecC
Confidence 99998889999999999999999999988888999999999999999999986 56999999999999999999999655
Q ss_pred ChhhhhcCCC----CcEEEeccccCCCCCCcccccCCCCceeeccccccc-ccccccccCCCcccccccccccCCCCCCC
Q 045798 239 PPSLGLLLPN----LKFFQIHHNFFSGSIPISLSNASKLEHIEIANNNFS-GKLSVNFGGMKNLSLLNLQFSNLGSGESD 313 (1008)
Q Consensus 239 p~~~~~~l~~----L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 313 (1008)
|..+.. +++ +.+|++++|.+.+..+..+... +|+.|++++|.+. +..+..+..+++|+.+++..+.+......
T Consensus 170 ~~~~~~-l~~L~~~l~~L~l~~n~l~~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l 247 (606)
T 3vq2_A 170 VNDLQF-LRENPQVNLSLDMSLNPIDFIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNL 247 (606)
T ss_dssp TTTTHH-HHHCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCC
T ss_pred hhhhhh-hhccccccceeeccCCCcceeCcccccCc-eeeeeeccCCccchhHHHHHhccccccccccccccccccCCcc
Confidence 544432 333 5589999999996655555544 9999999999987 56777889999999999877665443221
Q ss_pred c---ccccccccccCCCcEEEe-cCCcCCccCChhhhhhcccceeeeeccccccCCCCCccccccccceEEecCccccCC
Q 045798 314 E---MGFMNSLTNCSKLRVLSL-GGNQFRGALPHSIANLSSQLQILILSSNQFYGSIPLGIGNLVDLYLLGMVENQFTGA 389 (1008)
Q Consensus 314 ~---~~~~~~l~~l~~L~~L~L-s~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ 389 (1008)
. ...+..+..+ .++.+++ ..|.+.+.+|. +..+. +|+.|++++|.+. .+| .+..+++|+.|++++|.+ +.
T Consensus 248 ~~~~~~~~~~l~~l-~l~~l~l~~~~~~~~~~~~-~~~l~-~L~~L~l~~~~~~-~l~-~l~~~~~L~~L~l~~n~l-~~ 321 (606)
T 3vq2_A 248 EIFEPSIMEGLCDV-TIDEFRLTYTNDFSDDIVK-FHCLA-NVSAMSLAGVSIK-YLE-DVPKHFKWQSLSIIRCQL-KQ 321 (606)
T ss_dssp SCCCGGGGTTGGGS-EEEEEEECCCTTCCGGGGS-CGGGT-TCSEEEEESCCCC-CCC-CCCTTCCCSEEEEESCCC-SS
T ss_pred cccChHHhhhhhhc-cHhheeccccccccccccc-cccCC-CCCEEEecCccch-hhh-hccccccCCEEEcccccC-cc
Confidence 1 1222233333 5677777 78888888877 66665 6999999999997 667 899999999999999999 57
Q ss_pred cchhccCCCCCceEEccCCcccccccccccCCCCcceeeccccccccc--cCCCCcCCCcccEeecccccccCCcchhhh
Q 045798 390 IPKEMGKLQKLQGLDFSGNHFSGEIPSSLGNLSSLYEVFFNNNNLSGV--IPFSLGNLKRLAFLEMSGNELSGTIPEDIF 467 (1008)
Q Consensus 390 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~--~p~~~~~l~~L~~L~Ls~N~l~~~lp~~~~ 467 (1008)
+| .+ .+++|+.|++++|+..+.+ .+..+++|++|++++|.+++. .|..+..+++|+.|++++|.++ .+|..+.
T Consensus 322 lp-~~-~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~-~~~~~~~ 396 (606)
T 3vq2_A 322 FP-TL-DLPFLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAI-IMSANFM 396 (606)
T ss_dssp CC-CC-CCSSCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEE-EECCCCT
T ss_pred cc-cC-CCCccceeeccCCcCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCccc-cchhhcc
Confidence 88 45 9999999999999765444 678999999999999999976 3888999999999999999998 5885554
Q ss_pred hhhhhhhhhcccCccccCCCc-ccccccccccccccccccccCCCCcccccccccceeeccCccccc-chhhhhhccccc
Q 045798 468 NISYLSNSLNLARNHLVGIIP-PRIGNLRALRSFDVSNNDLSGEIPIELGHCSSLEEIYLAGNLFHG-SIPSFFNALKGV 545 (1008)
Q Consensus 468 ~~~~~~~~L~L~~N~l~~~~p-~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L 545 (1008)
.. ..++.|++++|++.+..| ..+..+++|+.|++++|.+++..|..++.+++|++|+|++|++++ .+|..|+.+++|
T Consensus 397 ~l-~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L 475 (606)
T 3vq2_A 397 GL-EELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNL 475 (606)
T ss_dssp TC-TTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTC
T ss_pred CC-CCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCC
Confidence 44 456899999999999888 789999999999999999999999999999999999999999998 489999999999
Q ss_pred cEEecCCCcccccccCc-ccccccceeecccCcccccCCCC-cccCCcccceeccCCccCC
Q 045798 546 QKIDLSRNNLSGQIPIF-LEALSLEYLNLSFNDFEGKIPAK-GIFANASAISVVGCNRLCG 604 (1008)
Q Consensus 546 ~~L~ls~N~l~~~~p~~-~~~~~L~~L~l~~N~l~g~~p~~-~~~~~~~~~~~~~n~~l~g 604 (1008)
+.|+|++|++++.+|.. ..+.+|++|++++|++++.+|.. ..+.++..+.+.+|. +.+
T Consensus 476 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~-l~~ 535 (606)
T 3vq2_A 476 TFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNR-IET 535 (606)
T ss_dssp CEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSC-CCC
T ss_pred CEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCc-Ccc
Confidence 99999999999988876 67889999999999999998864 345666677666664 443
No 13
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=2e-52 Score=500.37 Aligned_cols=492 Identities=18% Similarity=0.209 Sum_probs=375.9
Q ss_pred CCCcccceEEcCCCCeEEEEeccccCCCCccCcCccCCccCCeeeecCCCCCCCCCccccCCCCCCEEEccCCCCCCccC
Q 045798 40 HFCEWEGITCGRRHRRVTALDLMSKSLSGSLSPHLGNLSFLREINLSNNTIQGEIPPEFGRLFRLEALFLSNNSLVGKIP 119 (1008)
Q Consensus 40 ~~c~w~gv~c~~~~~~v~~l~l~~~~l~~~l~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p 119 (1008)
..|.|.|+ |+. ++++++ .+|+.+. ++|++|+|++|++++..|.+|.++++|++|+|++|++++..|
T Consensus 2 ~~C~~~~~-c~~----------~~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~ 67 (549)
T 2z81_A 2 LSCDASGV-CDG----------RSRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEG 67 (549)
T ss_dssp CEECTTSE-EEC----------TTSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECT
T ss_pred ccCCCCce-EEC----------CCCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccCh
Confidence 46999998 854 345566 6777665 789999999999998889999999999999999999998888
Q ss_pred cccccCcCcceEeeeccccccCCCccccccCCCCeeecccccCCC-CCCCCCccccccchhhccccc-CCCCCCccccCC
Q 045798 120 ANLSYCSRLTVLCIEYNKLQGRIPLEFVSLSKLKDLSLAKNKLTG-GIPPFLGNLTSLEVLSLAGNS-FGRNIPDSLGQL 197 (1008)
Q Consensus 120 ~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~-l~~~~~~~~~~l 197 (1008)
..|+.+++|++|+|++|++++..|..|+++++|++|++++|++++ ..|..++++++|++|++++|. +....+..|..+
T Consensus 68 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l 147 (549)
T 2z81_A 68 DAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGL 147 (549)
T ss_dssp TTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTC
T ss_pred hhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcc
Confidence 999999999999999999998888889999999999999999996 357889999999999999999 444445789999
Q ss_pred CCCcEEEecCCcccccCCccccCCCCcceeccccccccccCChhhhhcCCCCcEEEeccccCCCCC--C-cccccCCCCc
Q 045798 198 KQLKILAIGGNNLSGPIPPSIYNLSFLVVFSVSHNQIHGSLPPSLGLLLPNLKFFQIHHNFFSGSI--P-ISLSNASKLE 274 (1008)
Q Consensus 198 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~--p-~~l~~l~~L~ 274 (1008)
++|++|++++|.+++..|..+..+++|+.|+++.|.+. .+|..++..+++|++|++++|.+.+.. | .....+++|+
T Consensus 148 ~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~ 226 (549)
T 2z81_A 148 TSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESA-FLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMK 226 (549)
T ss_dssp CEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBST-THHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCC
T ss_pred cccCeeeccCCcccccChhhhhccccCceEecccCccc-ccchhhHhhcccccEEEccCCccccccccccchhhhhhccc
Confidence 99999999999999999999999999999999999987 788888778999999999999998642 2 2335678999
Q ss_pred eeeccccccccccccc----ccCCCcccccccccccCCCCCCCcccccccccccCCCcEEEecCCcCCcc-----CChhh
Q 045798 275 HIEIANNNFSGKLSVN----FGGMKNLSLLNLQFSNLGSGESDEMGFMNSLTNCSKLRVLSLGGNQFRGA-----LPHSI 345 (1008)
Q Consensus 275 ~L~L~~N~l~~~~~~~----~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~-----~p~~~ 345 (1008)
.|++++|.+.+..+.. +..+++|+.+++++|.+.............+..+.+|+.|++.++.+... ++..
T Consensus 227 ~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~- 305 (549)
T 2z81_A 227 KLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTV- 305 (549)
T ss_dssp EEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHH-
T ss_pred ceeccccccchhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhh-
Confidence 9999999998755433 45678999999999887665432222234567788999999999987632 1222
Q ss_pred hhhcccceeeeeccccccCCCCCcc-ccccccceEEecCccccCCcch---hccCCCCCceEEccCCccccccc--cccc
Q 045798 346 ANLSSQLQILILSSNQFYGSIPLGI-GNLVDLYLLGMVENQFTGAIPK---EMGKLQKLQGLDFSGNHFSGEIP--SSLG 419 (1008)
Q Consensus 346 ~~l~~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~L~~n~l~~~~~~---~~~~l~~L~~L~Ls~N~l~~~~p--~~~~ 419 (1008)
.....+|+.|++++|.+. .+|..+ ..+++|+.|++++|++.+..|. .+..+++|++|+|++|++++..+ ..+.
T Consensus 306 ~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 384 (549)
T 2z81_A 306 YSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILL 384 (549)
T ss_dssp HHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGG
T ss_pred hhhcccceEEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhh
Confidence 223346999999999987 677766 5799999999999999887654 37788999999999999985433 4588
Q ss_pred CCCCcceeeccccccccccCCCCcCCCcccEeecccccccCCcchhhhhhhhhhhhhcccCccccCCCcccccccccccc
Q 045798 420 NLSSLYEVFFNNNNLSGVIPFSLGNLKRLAFLEMSGNELSGTIPEDIFNISYLSNSLNLARNHLVGIIPPRIGNLRALRS 499 (1008)
Q Consensus 420 ~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~~~~~~~~~~~~L~L~~N~l~~~~p~~~~~l~~L~~ 499 (1008)
.+++|++|++++|+++ .+|..+..+++|++|++++|+++ .+|..+. ..++.|+|++|++++.+ +.+++|+.
T Consensus 385 ~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~-~l~~~~~---~~L~~L~Ls~N~l~~~~----~~l~~L~~ 455 (549)
T 2z81_A 385 TLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIR-VVKTCIP---QTLEVLDVSNNNLDSFS----LFLPRLQE 455 (549)
T ss_dssp GCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCS-CCCTTSC---TTCSEEECCSSCCSCCC----CCCTTCCE
T ss_pred cCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCcc-cccchhc---CCceEEECCCCChhhhc----ccCChhcE
Confidence 8999999999999998 67888899999999999999987 4554332 22344444444444321 23444444
Q ss_pred cccccccccCCCCcccccccccceeeccCcccccchhhhhhccccccEEecCCCcccccc
Q 045798 500 FDVSNNDLSGEIPIELGHCSSLEEIYLAGNLFHGSIPSFFNALKGVQKIDLSRNNLSGQI 559 (1008)
Q Consensus 500 Ldls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~ 559 (1008)
|||++|+++ .+|. ...+++|++|+|++|+|++.+|..|..+++|+.|+|++|++++..
T Consensus 456 L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 513 (549)
T 2z81_A 456 LYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 513 (549)
T ss_dssp EECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCH
T ss_pred EECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCC
Confidence 444444444 3443 233444444444444444444444444444444444444444433
No 14
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.1e-50 Score=485.43 Aligned_cols=503 Identities=19% Similarity=0.169 Sum_probs=384.5
Q ss_pred ccCCCCccCcCccCCccCCeeeecCCCCCCCCCccccCCCCCCEEEccCCCCCCccCcccccCcCcceEeeeccccccCC
Q 045798 63 SKSLSGSLSPHLGNLSFLREINLSNNTIQGEIPPEFGRLFRLEALFLSNNSLVGKIPANLSYCSRLTVLCIEYNKLQGRI 142 (1008)
Q Consensus 63 ~~~l~~~l~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~ 142 (1008)
+.+++ .+|..+. +.+++|+|++|++++..+.+|.++++|++|+|++|++++..|..|+++++|++|+|++|++++..
T Consensus 16 ~~~l~-~ip~~l~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~ 92 (570)
T 2z63_A 16 ELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLA 92 (570)
T ss_dssp SSCCS-SCCSSSC--SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEEC
T ss_pred CCCcc-ccCCCcc--ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccC
Confidence 33444 4555443 46888888888888777778888888888888888888777778888888888888888888777
Q ss_pred CccccccCCCCeeecccccCCCCCCCCCccccccchhhcccccCCC-CCCccccCCCCCcEEEecCCcccccCCccccCC
Q 045798 143 PLEFVSLSKLKDLSLAKNKLTGGIPPFLGNLTSLEVLSLAGNSFGR-NIPDSLGQLKQLKILAIGGNNLSGPIPPSIYNL 221 (1008)
Q Consensus 143 p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 221 (1008)
|..|.++++|++|++++|++++..+..++++++|++|++++|.+.+ .+|..|+++++|++|++++|.+++..+..+..+
T Consensus 93 ~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 172 (570)
T 2z63_A 93 LGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVL 172 (570)
T ss_dssp TTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHH
T ss_pred HhhhcCccccccccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccch
Confidence 7888888888888888888886555568888888888888888866 358888888888888888888887777788888
Q ss_pred CCc----ceeccccccccccCChhhhhcCCCCcEEEeccccCCC-CCCcccccCCCCceeecccccc------ccccccc
Q 045798 222 SFL----VVFSVSHNQIHGSLPPSLGLLLPNLKFFQIHHNFFSG-SIPISLSNASKLEHIEIANNNF------SGKLSVN 290 (1008)
Q Consensus 222 ~~L----~~L~ls~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~L~~N~l------~~~~~~~ 290 (1008)
++| +.|++++|.+.+. +...+... +|+.|++++|.... .++..+..++.++.+.+..+.+ .......
T Consensus 173 ~~L~~~~~~L~l~~n~l~~~-~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~ 250 (570)
T 2z63_A 173 HQMPLLNLSLDLSLNPMNFI-QPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSA 250 (570)
T ss_dssp HTCTTCCCEEECTTCCCCEE-CTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTT
T ss_pred hccchhhhhcccCCCCceec-CHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhh
Confidence 877 7888888888744 44444433 78888888875432 3344555666666555543322 2222333
Q ss_pred ccCCCcc--cccccccc-cCCCCCCCcccccccccccCCCcEEEecCCcCCccCChhhhhhcccceeeeeccccccCCCC
Q 045798 291 FGGMKNL--SLLNLQFS-NLGSGESDEMGFMNSLTNCSKLRVLSLGGNQFRGALPHSIANLSSQLQILILSSNQFYGSIP 367 (1008)
Q Consensus 291 ~~~l~~L--~~L~L~~n-~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p 367 (1008)
|.++.++ +.++++.+ .+.. ..+..+..+++|+.|++++|.+. .+|..+..+ +|++|++++|.+. .+|
T Consensus 251 ~~~l~~l~l~~l~l~~~~~~~~------~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~--~L~~L~l~~n~~~-~l~ 320 (570)
T 2z63_A 251 LEGLCNLTIEEFRLAYLDYYLD------DIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF--GWQHLELVNCKFG-QFP 320 (570)
T ss_dssp TGGGGGSEEEEEEEEETTEEES------CSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCC--CCSEEEEESCBCS-SCC
T ss_pred hccccccchhhhhhhcchhhhh------hchhhhcCcCcccEEEecCccch-hhhhhhccC--CccEEeeccCccc-ccC
Confidence 4443333 33333333 2211 12335667788888888888887 577777666 5888888888887 565
Q ss_pred CccccccccceEEecCccccCCcchhccCCCCCceEEccCCcccccc--cccccCCCCcceeeccccccccccCCCCcCC
Q 045798 368 LGIGNLVDLYLLGMVENQFTGAIPKEMGKLQKLQGLDFSGNHFSGEI--PSSLGNLSSLYEVFFNNNNLSGVIPFSLGNL 445 (1008)
Q Consensus 368 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~--p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l 445 (1008)
. ..+++|+.|++++|.+.+..+. ..+++|+.|+|++|++++.. |..+.++++|++|++++|.+.+..+. +..+
T Consensus 321 ~--~~l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l 395 (570)
T 2z63_A 321 T--LKLKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGL 395 (570)
T ss_dssp B--CBCSSCCEEEEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETC
T ss_pred c--ccccccCEEeCcCCcccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-cccc
Confidence 5 4677888888888888766554 67788888888888887543 66777888888888888888865554 8888
Q ss_pred CcccEeecccccccCCcchhhhhhhhhhhhhcccCccccCCCccccccccccccccccccccc-CCCCccccccccccee
Q 045798 446 KRLAFLEMSGNELSGTIPEDIFNISYLSNSLNLARNHLVGIIPPRIGNLRALRSFDVSNNDLS-GEIPIELGHCSSLEEI 524 (1008)
Q Consensus 446 ~~L~~L~Ls~N~l~~~lp~~~~~~~~~~~~L~L~~N~l~~~~p~~~~~l~~L~~Ldls~N~l~-~~~p~~~~~l~~L~~L 524 (1008)
++|+.|++++|++++..|...+.....+++|++++|.+.+..|..+..+++|+.|+|++|.++ +.+|..+..+++|++|
T Consensus 396 ~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L 475 (570)
T 2z63_A 396 EQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFL 475 (570)
T ss_dssp TTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEE
T ss_pred CCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEE
Confidence 888888888888886666555555566678888888888888999999999999999999998 6799999999999999
Q ss_pred eccCcccccchhhhhhccccccEEecCCCcccccccCc-ccccccceeecccCcccccCCCC
Q 045798 525 YLAGNLFHGSIPSFFNALKGVQKIDLSRNNLSGQIPIF-LEALSLEYLNLSFNDFEGKIPAK 585 (1008)
Q Consensus 525 ~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~-~~~~~L~~L~l~~N~l~g~~p~~ 585 (1008)
+|++|++++..|..|..+++|+.|+|++|++++.+|.. ..+.+|+.|++++|+++|.+|..
T Consensus 476 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~ 537 (570)
T 2z63_A 476 DLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 537 (570)
T ss_dssp ECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTT
T ss_pred ECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcch
Confidence 99999999888999999999999999999999988765 67889999999999999999865
No 15
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=2.9e-51 Score=441.94 Aligned_cols=269 Identities=27% Similarity=0.412 Sum_probs=211.0
Q ss_pred cCCCCCceEeeccCeeEEEEEEc-----CCCeEEEEEEeccccchhhHHHHHHHHHHhhcCCCCceeeeeccccccccCC
Q 045798 684 NGFSSTHLIGVGSFGCVYKGALD-----EDGIVVAIKVINLQCEGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGN 758 (1008)
Q Consensus 684 ~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 758 (1008)
++|.+.+.||+|+||+||+|++. .+++.||||+++.......++|.+|+++|++++|||||+++|+| .++
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~-----~~~ 87 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVC-----VEG 87 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-----CSS
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEE-----eeC
Confidence 46788899999999999999874 35789999999877667778899999999999999999999996 445
Q ss_pred ceEEEEEeccCCCChhcccccCCCCC---CCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCC
Q 045798 759 DFKAIVYEYMPNGSLEKWLHPHAVPK---RDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDND 835 (1008)
Q Consensus 759 ~~~~lv~e~~~~gsL~~~l~~~~~~~---~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 835 (1008)
+..++|||||++|+|.++++..+... ........+++.+++.|+.|||.||+|||++ +||||||||+|||++++
T Consensus 88 ~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~ 164 (299)
T 4asz_A 88 DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGEN 164 (299)
T ss_dssp SSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGG
T ss_pred CEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCC
Confidence 67999999999999999997653100 0001122799999999999999999999997 99999999999999999
Q ss_pred CCeEEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHh-CCCCCCccccCCccHH
Q 045798 836 LSGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVT-AKKPTDVMFEGDLNLH 914 (1008)
Q Consensus 836 ~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-G~~pf~~~~~~~~~~~ 914 (1008)
+.+||+|||+|+......... ......||+.|||||++.+..|+.++|||||||++|||+| |+.||...... ...
T Consensus 165 ~~~Ki~DFGla~~~~~~~~~~--~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~--~~~ 240 (299)
T 4asz_A 165 LLVKIGDFGMSRDVYSTDYYR--VGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN--EVI 240 (299)
T ss_dssp GCEEECCCSCHHHHTGGGCEE--ETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH--HHH
T ss_pred CcEEECCcccceecCCCCcee--ecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH--HHH
Confidence 999999999998654432221 1233458999999999999999999999999999999999 89998643111 000
Q ss_pred HHHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHHHHHHHHH
Q 045798 915 NFARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHELQSVKNI 994 (1008)
Q Consensus 915 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~i~~~ 994 (1008)
.... . ..+.+ ....++.++.+++.+||+.||++||||+||++.|+++.+.
T Consensus 241 ~~i~-----------~---------------~~~~~----~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~ 290 (299)
T 4asz_A 241 ECIT-----------Q---------------GRVLQ----RPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA 290 (299)
T ss_dssp HHHH-----------H---------------TCCCC----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHH-----------c---------------CCCCC----CCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence 0000 0 00000 0113556789999999999999999999999999887654
No 16
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=9.9e-51 Score=437.27 Aligned_cols=262 Identities=30% Similarity=0.442 Sum_probs=202.2
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEecccc--chhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCce
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQC--EGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDF 760 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 760 (1008)
.++|++.++||+|+||+||+|++. ..||||+++... ....+.|.+|++++++++|||||+++|+|. ++.
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~---~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~------~~~ 105 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWH---GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT------KDN 105 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESS---SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC------SSS
T ss_pred HHHeEEeeEEeeCCCcEEEEEEEC---CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE------CCe
Confidence 457888999999999999999874 259999997432 344578999999999999999999999863 234
Q ss_pred EEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeEE
Q 045798 761 KAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGHI 840 (1008)
Q Consensus 761 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 840 (1008)
.++|||||++|+|.++++.... ++++.++..|+.|||.||+|||++ +||||||||+|||+++++.+||
T Consensus 106 ~~iVmEy~~gGsL~~~l~~~~~---------~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki 173 (307)
T 3omv_A 106 LAIVTQWCEGSSLYKHLHVQET---------KFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKI 173 (307)
T ss_dssp CEEEEECCSSCBHHHHHHTSCC---------CCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEE
T ss_pred EEEEEEcCCCCCHHHHHhhcCC---------CCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEE
Confidence 7999999999999999975432 689999999999999999999997 9999999999999999999999
Q ss_pred cccCcccccccccCccccccccccccccccCccccCC---CCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHH
Q 045798 841 GDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLG---SEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFA 917 (1008)
Q Consensus 841 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~ 917 (1008)
+|||+|+......... ......||+.|||||++.+ +.|+.++|||||||++|||+||+.||........ .....
T Consensus 174 ~DFGla~~~~~~~~~~--~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~-~~~~~ 250 (307)
T 3omv_A 174 GDFGLATVKSRWSGSQ--QVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQ-IIFMV 250 (307)
T ss_dssp CCCSSCBC--------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH-HHHHH
T ss_pred eeccCceecccCCcce--eecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHH-HHHHH
Confidence 9999998664432221 2234569999999999854 4689999999999999999999999964321110 11111
Q ss_pred HhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHHHHHHHHH
Q 045798 918 RMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHELQSVKNI 994 (1008)
Q Consensus 918 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~i~~~ 994 (1008)
.... ..+.+. .....++.++.+++.+||+.||++||||.||++.|+.++..
T Consensus 251 ~~~~-------~~p~~~-------------------~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~ 301 (307)
T 3omv_A 251 GRGY-------ASPDLS-------------------KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHS 301 (307)
T ss_dssp HTTC-------CCCCST-------------------TSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTT
T ss_pred hcCC-------CCCCcc-------------------cccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhcc
Confidence 0000 000000 01123566789999999999999999999999999887654
No 17
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=1.2e-50 Score=443.38 Aligned_cols=269 Identities=26% Similarity=0.404 Sum_probs=206.2
Q ss_pred cCCCCCceEeeccCeeEEEEEEc-----CCCeEEEEEEeccccchhhHHHHHHHHHHhhcCCCCceeeeeccccccccCC
Q 045798 684 NGFSSTHLIGVGSFGCVYKGALD-----EDGIVVAIKVINLQCEGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGN 758 (1008)
Q Consensus 684 ~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 758 (1008)
++|.+.++||+|+||+||+|++. .+++.||||+++.......++|.+|+++|++++|||||+++|+|. ++
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~-----~~ 115 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCT-----EG 115 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-----SS
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEE-----EC
Confidence 45677899999999999999874 357899999998776677788999999999999999999999964 45
Q ss_pred ceEEEEEeccCCCChhcccccCCCCCC-----CcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeec
Q 045798 759 DFKAIVYEYMPNGSLEKWLHPHAVPKR-----DKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLD 833 (1008)
Q Consensus 759 ~~~~lv~e~~~~gsL~~~l~~~~~~~~-----~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~ 833 (1008)
+..++|||||++|+|.++++....... ......++++.+++.|+.|||.||+|||+. +||||||||+|||++
T Consensus 116 ~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~ 192 (329)
T 4aoj_A 116 RPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVG 192 (329)
T ss_dssp SSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEE
T ss_pred CEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEEC
Confidence 669999999999999999987543211 011123699999999999999999999997 999999999999999
Q ss_pred CCCCeEEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHh-CCCCCCccccCCcc
Q 045798 834 NDLSGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVT-AKKPTDVMFEGDLN 912 (1008)
Q Consensus 834 ~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-G~~pf~~~~~~~~~ 912 (1008)
+++.+||+|||+|+......... ......||+.|||||++.+..|+.++|||||||++|||+| |+.||......+
T Consensus 193 ~~~~~Ki~DFGla~~~~~~~~~~--~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~-- 268 (329)
T 4aoj_A 193 QGLVVKIGDFGMSRDIYSTDYYR--VGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTE-- 268 (329)
T ss_dssp TTTEEEECCCC------------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHH--
T ss_pred CCCcEEEcccccceeccCCCcce--ecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHH--
Confidence 99999999999998664432221 1234569999999999999999999999999999999999 899986431110
Q ss_pred HHHHHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHHHHHHH
Q 045798 913 LHNFARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHELQSVK 992 (1008)
Q Consensus 913 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~i~ 992 (1008)
....... ..+.+ ....++.++.+++.+||+.||++||||+||++.|+.+.
T Consensus 269 ~~~~i~~--------------------------g~~~~----~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~ 318 (329)
T 4aoj_A 269 AIDCITQ--------------------------GRELE----RPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALA 318 (329)
T ss_dssp HHHHHHH--------------------------TCCCC----CCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHH
T ss_pred HHHHHHc--------------------------CCCCC----CcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHh
Confidence 0000000 00000 01135567899999999999999999999999999886
Q ss_pred HH
Q 045798 993 NI 994 (1008)
Q Consensus 993 ~~ 994 (1008)
+.
T Consensus 319 ~~ 320 (329)
T 4aoj_A 319 QA 320 (329)
T ss_dssp HS
T ss_pred hC
Confidence 54
No 18
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.3e-49 Score=478.52 Aligned_cols=492 Identities=21% Similarity=0.193 Sum_probs=405.4
Q ss_pred CeEEEEeccccCCCCccCcCccCCccCCeeeecCCCCCCCCCccccCCCCCCEEEccCCCCCCccCcccccCcCcceEee
Q 045798 54 RRVTALDLMSKSLSGSLSPHLGNLSFLREINLSNNTIQGEIPPEFGRLFRLEALFLSNNSLVGKIPANLSYCSRLTVLCI 133 (1008)
Q Consensus 54 ~~v~~l~l~~~~l~~~l~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L 133 (1008)
..++.|||++|.+++..+..+..+++|++|+|++|++++..|..|.++++|++|+|++|.+++..|..|+++++|++|++
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccc
Confidence 46899999999999877889999999999999999999888889999999999999999999888899999999999999
Q ss_pred eccccccCCCccccccCCCCeeecccccCCC-CCCCCCccccccchhhcccccCCCCCCccccCCCCC----cEEEecCC
Q 045798 134 EYNKLQGRIPLEFVSLSKLKDLSLAKNKLTG-GIPPFLGNLTSLEVLSLAGNSFGRNIPDSLGQLKQL----KILAIGGN 208 (1008)
Q Consensus 134 s~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L----~~L~L~~n 208 (1008)
++|++++..+..|+++++|++|++++|.+++ .+|..|+++++|++|++++|++++..+..|+.+++| +.|++++|
T Consensus 108 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n 187 (570)
T 2z63_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 187 (570)
T ss_dssp TTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTC
T ss_pred cccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCC
Confidence 9999997777789999999999999999996 469999999999999999999998888899999988 89999999
Q ss_pred cccccCCccccCCCCcceeccccccccccCChhhhhcCCCCcEEEeccccCCC------CCCcccccCC--CCceeeccc
Q 045798 209 NLSGPIPPSIYNLSFLVVFSVSHNQIHGSLPPSLGLLLPNLKFFQIHHNFFSG------SIPISLSNAS--KLEHIEIAN 280 (1008)
Q Consensus 209 ~l~~~~~~~~~~l~~L~~L~ls~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~------~~p~~l~~l~--~L~~L~L~~ 280 (1008)
.+++..+..+..+ +|+.|++++|.............+++++.+.+..+.+.. .....+..+. .++.+++++
T Consensus 188 ~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~ 266 (570)
T 2z63_A 188 PMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAY 266 (570)
T ss_dssp CCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEE
T ss_pred CceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhc
Confidence 9999888888877 899999999965433223344456777766665433221 1122223332 356677777
Q ss_pred c-cccccccccccCCCcccccccccccCCCCCCCcccccccccccCCCcEEEecCCcCCccCChhhhhhcccceeeeecc
Q 045798 281 N-NFSGKLSVNFGGMKNLSLLNLQFSNLGSGESDEMGFMNSLTNCSKLRVLSLGGNQFRGALPHSIANLSSQLQILILSS 359 (1008)
Q Consensus 281 N-~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~ 359 (1008)
| .+.+..+..|..+++|+.|++++|.+..+. ..+..+ +|+.|++++|.+. .+|.. .+. +|+.|++++
T Consensus 267 ~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~l~-------~~~~~~-~L~~L~l~~n~~~-~l~~~--~l~-~L~~L~l~~ 334 (570)
T 2z63_A 267 LDYYLDDIIDLFNCLTNVSSFSLVSVTIERVK-------DFSYNF-GWQHLELVNCKFG-QFPTL--KLK-SLKRLTFTS 334 (570)
T ss_dssp TTEEESCSTTTTGGGTTCSEEEEESCEECSCC-------BCCSCC-CCSEEEEESCBCS-SCCBC--BCS-SCCEEEEES
T ss_pred chhhhhhchhhhcCcCcccEEEecCccchhhh-------hhhccC-CccEEeeccCccc-ccCcc--ccc-ccCEEeCcC
Confidence 7 677777788888888888888888776543 235556 8888888888887 56652 333 588888888
Q ss_pred ccccCCCCCccccccccceEEecCccccCCc--chhccCCCCCceEEccCCcccccccccccCCCCcceeeccccccccc
Q 045798 360 NQFYGSIPLGIGNLVDLYLLGMVENQFTGAI--PKEMGKLQKLQGLDFSGNHFSGEIPSSLGNLSSLYEVFFNNNNLSGV 437 (1008)
Q Consensus 360 N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~--~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 437 (1008)
|.+.+..+. ..+++|+.|++++|++++.. +..+..+++|++|+|++|.+.+..+ .+..+++|++|++++|.+.+.
T Consensus 335 n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~-~~~~l~~L~~L~l~~n~l~~~ 411 (570)
T 2z63_A 335 NKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSS-NFLGLEQLEHLDFQHSNLKQM 411 (570)
T ss_dssp CBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEE-EEETCTTCCEEECTTSEEESC
T ss_pred Ccccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCccccccc-cccccCCCCEEEccCCccccc
Confidence 888766654 67888888888888887654 6778888888888888888885444 488888888888888888876
Q ss_pred cC-CCCcCCCcccEeecccccccCCcchhhhhhhhhhhhhcccCcccc-CCCcccccccccccccccccccccCCCCccc
Q 045798 438 IP-FSLGNLKRLAFLEMSGNELSGTIPEDIFNISYLSNSLNLARNHLV-GIIPPRIGNLRALRSFDVSNNDLSGEIPIEL 515 (1008)
Q Consensus 438 ~p-~~~~~l~~L~~L~Ls~N~l~~~lp~~~~~~~~~~~~L~L~~N~l~-~~~p~~~~~l~~L~~Ldls~N~l~~~~p~~~ 515 (1008)
.| ..+.++++|++|++++|++++..|..+.. ...++.|+|++|.++ +.+|..++.+++|+.|+|++|.+++..|..+
T Consensus 412 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~-l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~ 490 (570)
T 2z63_A 412 SEFSVFLSLRNLIYLDISHTHTRVAFNGIFNG-LSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAF 490 (570)
T ss_dssp TTSCTTTTCTTCCEEECTTSCCEECCTTTTTT-CTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTT
T ss_pred cchhhhhcCCCCCEEeCcCCcccccchhhhhc-CCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhh
Confidence 65 56888888888888888888655554443 345578888888887 5789999999999999999999998889999
Q ss_pred ccccccceeeccCcccccchhhhhhccccccEEecCCCcccccccCc
Q 045798 516 GHCSSLEEIYLAGNLFHGSIPSFFNALKGVQKIDLSRNNLSGQIPIF 562 (1008)
Q Consensus 516 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~ 562 (1008)
..+++|++|+|++|++++.+|..|..+++|+.|++++|++++..|..
T Consensus 491 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~ 537 (570)
T 2z63_A 491 NSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 537 (570)
T ss_dssp TTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTT
T ss_pred hcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcch
Confidence 99999999999999999988899999999999999999999988754
No 19
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=2e-50 Score=439.93 Aligned_cols=250 Identities=23% Similarity=0.319 Sum_probs=208.1
Q ss_pred cCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCceEEE
Q 045798 684 NGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDFKAI 763 (1008)
Q Consensus 684 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 763 (1008)
+.|++.++||+|+||+||+|+++.+|+.||||+++.......+.+.+|+++|++++|||||+++++ +.+++..|+
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~-----~~~~~~~~i 148 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNS-----YLVGDELWV 148 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEE-----EEETTEEEE
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEE-----EEECCEEEE
Confidence 468999999999999999999999999999999986666666789999999999999999999999 456778999
Q ss_pred EEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeEEccc
Q 045798 764 VYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGHIGDF 843 (1008)
Q Consensus 764 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 843 (1008)
|||||++|+|.+++... ++++.+++.|+.||+.||+|||++ +||||||||+|||++.++.+||+||
T Consensus 149 vmEy~~gg~L~~~l~~~-----------~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DF 214 (346)
T 4fih_A 149 VMEFLEGGALTDIVTHT-----------RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDF 214 (346)
T ss_dssp EECCCTTEEHHHHHHHS-----------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCC
T ss_pred EEeCCCCCcHHHHHHcC-----------CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecC
Confidence 99999999999999753 689999999999999999999998 9999999999999999999999999
Q ss_pred CcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCc
Q 045798 844 GLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFARMALPN 923 (1008)
Q Consensus 844 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~~~~~~ 923 (1008)
|+|+........ ....+||+.|||||++.+..|+.++||||+||++|||++|+.||..... ...........+.
T Consensus 215 Gla~~~~~~~~~----~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~--~~~~~~i~~~~~~ 288 (346)
T 4fih_A 215 GFCAQVSKEVPR----RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP--LKAMKMIRDNLPP 288 (346)
T ss_dssp TTCEECCSSSCC----BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--HHHHHHHHHSSCC
T ss_pred cCceecCCCCCc----ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH--HHHHHHHHcCCCC
Confidence 999876543222 2346799999999999999999999999999999999999999864211 0010111111000
Q ss_pred chhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 924 QVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 924 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
........+.++.+++.+||+.||++|||++|+++
T Consensus 289 ----------------------------~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 289 ----------------------------RLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp ----------------------------CCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ----------------------------CCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 01111234556899999999999999999999875
No 20
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=1.2e-50 Score=442.59 Aligned_cols=252 Identities=25% Similarity=0.336 Sum_probs=201.5
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEecccc--chhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCce
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQC--EGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDF 760 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 760 (1008)
.++|++++.||+|+||+||+|++..+|+.||||+++... ....+.+.+|++++++++|||||+++++ +.+++.
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~-----~~~~~~ 97 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRES-----FEENGS 97 (350)
T ss_dssp CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEE-----EEETTE
T ss_pred ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEE-----EEECCE
Confidence 368999999999999999999999999999999997542 3445789999999999999999999999 456778
Q ss_pred EEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeEE
Q 045798 761 KAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGHI 840 (1008)
Q Consensus 761 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 840 (1008)
.|+|||||+||+|.+++...+.. .+++.+++.|+.||+.||+|||++ +||||||||+|||+++++.+||
T Consensus 98 ~yiVmEy~~gg~L~~~i~~~~~~--------~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl 166 (350)
T 4b9d_A 98 LYIVMDYCEGGDLFKRINAQKGV--------LFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQL 166 (350)
T ss_dssp EEEEEECCTTCBHHHHHHHTTTC--------CCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEE
T ss_pred EEEEEeCCCCCcHHHHHHHcCCC--------CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEE
Confidence 99999999999999999754322 678999999999999999999998 9999999999999999999999
Q ss_pred cccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHHhh
Q 045798 841 GDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFARMA 920 (1008)
Q Consensus 841 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~~~ 920 (1008)
+|||+|+....... .....+||+.|||||++.+..|+.++|||||||++|||++|+.||......+ .+.......
T Consensus 167 ~DFGla~~~~~~~~----~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~-~~~~i~~~~ 241 (350)
T 4b9d_A 167 GDFGIARVLNSTVE----LARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKN-LVLKIISGS 241 (350)
T ss_dssp CSTTEESCCCHHHH----HHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHTC
T ss_pred cccccceeecCCcc----cccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH-HHHHHHcCC
Confidence 99999987654321 1223569999999999999999999999999999999999999996421110 001111100
Q ss_pred CCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 921 LPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 921 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
.+. .....+.++.+++.+||+.||++|||++|+++
T Consensus 242 ~~~-------------------------------~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 242 FPP-------------------------------VSLHYSYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp CCC-------------------------------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCC-------------------------------CCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 000 00123456899999999999999999999976
No 21
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=1.7e-50 Score=439.31 Aligned_cols=266 Identities=22% Similarity=0.273 Sum_probs=210.6
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCceEE
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 762 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 762 (1008)
.+.|++.++||+|+||+||+|+++.+|+.||||+++... ...+|++++++++|||||++++++ .+++..|
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~-----~~~~E~~il~~l~HpnIV~l~~~~-----~~~~~~~ 126 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEV-----FRVEELVACAGLSSPRIVPLYGAV-----REGPWVN 126 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT-----CCTHHHHTTTTCCCTTBCCEEEEE-----EETTEEE
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHH-----hHHHHHHHHHhCCCCCCCcEEEEE-----EECCEEE
Confidence 356888899999999999999999999999999997542 235799999999999999999994 5667799
Q ss_pred EEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCC-CeEEc
Q 045798 763 IVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDL-SGHIG 841 (1008)
Q Consensus 763 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kL~ 841 (1008)
+|||||+||+|.++++..+ .+++.+++.|+.||+.||+|||++ +||||||||+|||++.++ .+||+
T Consensus 127 ivmEy~~gg~L~~~l~~~~----------~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~ 193 (336)
T 4g3f_A 127 IFMELLEGGSLGQLIKQMG----------CLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALC 193 (336)
T ss_dssp EEECCCTTCBHHHHHHHHS----------SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEEC
T ss_pred EEEeccCCCcHHHHHHHcC----------CCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEe
Confidence 9999999999999997654 799999999999999999999998 999999999999999987 69999
Q ss_pred ccCcccccccccCcc-ccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHHhh
Q 045798 842 DFGLARFHQEVSNST-LSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFARMA 920 (1008)
Q Consensus 842 Dfg~a~~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~~~ 920 (1008)
|||+|+......... .......+||+.|||||++.+..|+.++|||||||++|||++|+.||........ ........
T Consensus 194 DFGla~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~-~~~i~~~~ 272 (336)
T 4g3f_A 194 DFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPL-CLKIASEP 272 (336)
T ss_dssp CCTTCEEC------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCC-HHHHHHSC
T ss_pred eCCCCeEccCCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH-HHHHHcCC
Confidence 999998765433221 1122345799999999999999999999999999999999999999975432221 11111100
Q ss_pred CCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 045798 921 LPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHELQSVKNILLELET 1000 (1008)
Q Consensus 921 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~i~~~~~~~~~ 1000 (1008)
... ..+ ...++..+.+++.+||+.||++|||+.|+++.|.........++.
T Consensus 273 --~~~---------------------~~~------~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~h 323 (336)
T 4g3f_A 273 --PPI---------------------REI------PPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKS 323 (336)
T ss_dssp --CGG---------------------GGS------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCS
T ss_pred --CCc---------------------hhc------CccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhhccC
Confidence 000 000 112456688999999999999999999999998887766554443
Q ss_pred h
Q 045798 1001 V 1001 (1008)
Q Consensus 1001 ~ 1001 (1008)
+
T Consensus 324 P 324 (336)
T 4g3f_A 324 P 324 (336)
T ss_dssp C
T ss_pred C
Confidence 3
No 22
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=2.8e-50 Score=436.27 Aligned_cols=266 Identities=22% Similarity=0.342 Sum_probs=208.3
Q ss_pred CCCCCceEeeccCeeEEEEEEc-----CCCeEEEEEEeccccc-hhhHHHHHHHHHHhhcCCCCceeeeeccccccccCC
Q 045798 685 GFSSTHLIGVGSFGCVYKGALD-----EDGIVVAIKVINLQCE-GASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGN 758 (1008)
Q Consensus 685 ~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 758 (1008)
++++.+.||+|+||+||+|++. .+++.||||+++.... ...+.|.+|+.++++++|||||+++|+|. .+
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~-----~~ 101 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVT-----KD 101 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEEC-----SS
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEE-----EC
Confidence 4667899999999999999973 3578999999975433 34578999999999999999999999964 45
Q ss_pred ceEEEEEeccCCCChhcccccCCCCCC------CcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeee
Q 045798 759 DFKAIVYEYMPNGSLEKWLHPHAVPKR------DKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILL 832 (1008)
Q Consensus 759 ~~~~lv~e~~~~gsL~~~l~~~~~~~~------~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll 832 (1008)
+..++|||||++|+|.+++........ .......+++.+++.|+.|||.||+|||+. +||||||||+|||+
T Consensus 102 ~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl 178 (308)
T 4gt4_A 102 QPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLV 178 (308)
T ss_dssp SSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEE
T ss_pred CEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEE
Confidence 568999999999999999975432111 111233699999999999999999999998 99999999999999
Q ss_pred cCCCCeEEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHh-CCCCCCccccCCc
Q 045798 833 DNDLSGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVT-AKKPTDVMFEGDL 911 (1008)
Q Consensus 833 ~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-G~~pf~~~~~~~~ 911 (1008)
++++.+||+|||+|+......... ......||+.|||||++.++.|+.++|||||||++|||+| |+.||......
T Consensus 179 ~~~~~~Ki~DFGlar~~~~~~~~~--~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~-- 254 (308)
T 4gt4_A 179 YDKLNVKISDLGLFREVYAADYYK--LLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ-- 254 (308)
T ss_dssp CGGGCEEECCSCCBCGGGGGGCBC--SSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHH--
T ss_pred CCCCCEEECCcccceeccCCCcee--EecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHH--
Confidence 999999999999998664432221 2234569999999999999999999999999999999998 89998643211
Q ss_pred cHHHHHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHHHHHH
Q 045798 912 NLHNFARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHELQSV 991 (1008)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~i 991 (1008)
.... .+.. ..+.+ ....++.++.++|.+||+.||++||||+||++.|+++
T Consensus 255 ---~~~~---------~i~~--------------~~~~~----~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 255 ---DVVE---------MIRN--------------RQVLP----CPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp ---HHHH---------HHHT--------------TCCCC----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred ---HHHH---------HHHc--------------CCCCC----CcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 1110 0000 00000 1123566789999999999999999999999999875
Q ss_pred H
Q 045798 992 K 992 (1008)
Q Consensus 992 ~ 992 (1008)
.
T Consensus 305 ~ 305 (308)
T 4gt4_A 305 G 305 (308)
T ss_dssp C
T ss_pred c
Confidence 4
No 23
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=3.5e-49 Score=429.49 Aligned_cols=282 Identities=24% Similarity=0.296 Sum_probs=205.7
Q ss_pred cCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCceEEE
Q 045798 684 NGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDFKAI 763 (1008)
Q Consensus 684 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 763 (1008)
++|.+.++||+|+||+||+|++ +|+.||||+++... .....+..|+..+.+++|||||+++++|...+ ......|+
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~--~g~~VAvK~l~~~~-~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~-~~~~~~~l 78 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSRE-ERSWFREAEIYQTVMLRHENILGFIAADNKDN-GTWTQLWL 78 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE--TTEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEEC-SSSEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccc-hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecC-CCceEEEE
Confidence 4577889999999999999998 68999999997542 22233445666677889999999999986421 12236899
Q ss_pred EEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhC-----CCCCceeccCCCCCeeecCCCCe
Q 045798 764 VYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHH-----CQEPILHCDLKPSNILLDNDLSG 838 (1008)
Q Consensus 764 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-----~~~~ivH~Dlkp~NIll~~~~~~ 838 (1008)
|||||++|+|.++++.. ++++..+.+++.|++.||+|||++ ..++||||||||+|||++.++.+
T Consensus 79 V~Ey~~~gsL~~~l~~~-----------~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~ 147 (303)
T 3hmm_A 79 VSDYHEHGSLFDYLNRY-----------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTC 147 (303)
T ss_dssp EEECCTTCBHHHHHHHC-----------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCE
T ss_pred EecCCCCCcHHHHHHhC-----------CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCE
Confidence 99999999999999754 689999999999999999999975 23589999999999999999999
Q ss_pred EEcccCcccccccccCccccccccccccccccCccccCCC------CCCcccchhhHHHHHHHHHhCCCCCCccccCCcc
Q 045798 839 HIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGS------EVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLN 912 (1008)
Q Consensus 839 kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~ 912 (1008)
||+|||+|+................+||+.|||||++.+. .++.++|||||||++|||+||++||.........
T Consensus 148 Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p 227 (303)
T 3hmm_A 148 CIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLP 227 (303)
T ss_dssp EECCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCT
T ss_pred EEEeCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCcccccccc
Confidence 9999999987655443333333446799999999998764 4678999999999999999999887543222111
Q ss_pred HHHHHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccch---hHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHHHH
Q 045798 913 LHNFARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGIN---SRLECLISMVKIGVACSMESPQDRMNMTNVVHELQ 989 (1008)
Q Consensus 913 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~ 989 (1008)
+..... .......+...... ...++..+ ...+++..+.+++.+||+.||++||||.||++.|+
T Consensus 228 ~~~~~~--~~~~~~~~~~~~~~------------~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~ 293 (303)
T 3hmm_A 228 YYDLVP--SDPSVEEMRKVVCE------------QKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLS 293 (303)
T ss_dssp TTTTSC--SSCCHHHHHHHHTT------------SCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHH
T ss_pred chhccc--ccchHHHHHHHHhc------------ccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHH
Confidence 110000 00000000000000 01111111 12356778999999999999999999999999999
Q ss_pred HHHHH
Q 045798 990 SVKNI 994 (1008)
Q Consensus 990 ~i~~~ 994 (1008)
++.+.
T Consensus 294 ~l~~~ 298 (303)
T 3hmm_A 294 QLSQQ 298 (303)
T ss_dssp HHHHC
T ss_pred HHHHH
Confidence 88654
No 24
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=2.6e-49 Score=423.09 Aligned_cols=251 Identities=26% Similarity=0.387 Sum_probs=197.5
Q ss_pred CCCceEeeccCeeEEEEEEcCCCeEEEEEEeccc--cchhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCceEEEE
Q 045798 687 SSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQ--CEGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDFKAIV 764 (1008)
Q Consensus 687 ~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 764 (1008)
++.+.||+|+||+||+|.+..+++.||+|++... .....+.|.+|++++++++|||||++++++... ...+...|+|
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~-~~~~~~~~lv 107 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWEST-VKGKKCIVLV 107 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEE-ETTEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeec-cCCCcEEEEE
Confidence 5667899999999999999999999999999643 234457899999999999999999999986432 1234568999
Q ss_pred EeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecC-CCCeEEccc
Q 045798 765 YEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDN-DLSGHIGDF 843 (1008)
Q Consensus 765 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kL~Df 843 (1008)
||||++|+|.+++.... .+++..++.|+.||+.||+|||++ .++||||||||+|||++. ++.+||+||
T Consensus 108 mEy~~gg~L~~~l~~~~----------~l~~~~~~~~~~qi~~aL~ylH~~-~~~IiHRDlKp~NILl~~~~g~vKl~DF 176 (290)
T 3fpq_A 108 TELMTSGTLKTYLKRFK----------VMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDL 176 (290)
T ss_dssp EECCCSCBHHHHHHHHS----------SCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCCCCCGGGEEESSTTSCEEECCT
T ss_pred EeCCCCCCHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHHC-CCCEEecccChhheeEECCCCCEEEEeC
Confidence 99999999999997654 789999999999999999999997 123999999999999974 799999999
Q ss_pred CcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCc
Q 045798 844 GLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFARMALPN 923 (1008)
Q Consensus 844 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~~~~~~ 923 (1008)
|+|+...... ....+||+.|||||++.+ .|+.++|||||||++|||+||+.||..... ...........
T Consensus 177 Gla~~~~~~~------~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~----~~~~~~~i~~~ 245 (290)
T 3fpq_A 177 GLATLKRASF------AKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQN----AAQIYRRVTSG 245 (290)
T ss_dssp TGGGGCCTTS------BEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSS----HHHHHHHHTTT
T ss_pred cCCEeCCCCc------cCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCc----HHHHHHHHHcC
Confidence 9998543221 223579999999999865 699999999999999999999999863211 11111100000
Q ss_pred chhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 924 QVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 924 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
. . + .......++++.+++.+||+.||++|||++|+++
T Consensus 246 ~---------~--~---------------~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 246 V---------K--P---------------ASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp C---------C--C---------------GGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred C---------C--C---------------CCCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 0 0 0 0000112345789999999999999999999875
No 25
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=3.9e-50 Score=430.95 Aligned_cols=249 Identities=23% Similarity=0.326 Sum_probs=206.2
Q ss_pred cCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccc---cchhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCce
Q 045798 684 NGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQ---CEGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDF 760 (1008)
Q Consensus 684 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 760 (1008)
++|++.+.||+|+||+||+|++..+++.||||+++.. .....+.+.+|++++++++|||||+++++ +++++.
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~-----~~~~~~ 106 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFT-----FQDDEK 106 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEE-----EECSSE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEE-----EEeCCE
Confidence 5799999999999999999999999999999999743 23445789999999999999999999999 567788
Q ss_pred EEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeEE
Q 045798 761 KAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGHI 840 (1008)
Q Consensus 761 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 840 (1008)
.|+|||||+||+|.+++...+ .+++.+++.++.||+.||+|||++ +||||||||+|||++.++.+||
T Consensus 107 ~yivmEy~~gG~L~~~i~~~~----------~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl 173 (311)
T 4aw0_A 107 LYFGLSYAKNGELLKYIRKIG----------SFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQI 173 (311)
T ss_dssp EEEEECCCTTEEHHHHHHHHS----------SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEE
T ss_pred EEEEEecCCCCCHHHHHHHcC----------CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEE
Confidence 999999999999999997654 799999999999999999999998 9999999999999999999999
Q ss_pred cccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHHhh
Q 045798 841 GDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFARMA 920 (1008)
Q Consensus 841 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~~~ 920 (1008)
+|||+|+......... .....+||+.|||||++.+..|+.++||||+||++|||++|+.||...... ........
T Consensus 174 ~DFGla~~~~~~~~~~--~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~-~~~~~i~~-- 248 (311)
T 4aw0_A 174 TDFGTAKVLSPESKQA--RANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEG-LIFAKIIK-- 248 (311)
T ss_dssp CCCTTCEECCTTTTCC--CBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHH--
T ss_pred EEcCCceecCCCCCcc--cccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHc--
Confidence 9999998765432221 233467999999999999999999999999999999999999999642110 00001100
Q ss_pred CCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHH
Q 045798 921 LPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVV 985 (1008)
Q Consensus 921 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl 985 (1008)
... .++. ..+.++.+++.+||+.||++|||++|++
T Consensus 249 --------------~~~----------~~p~------~~s~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 249 --------------LEY----------DFPE------KFFPKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp --------------TCC----------CCCT------TCCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred --------------CCC----------CCCc------ccCHHHHHHHHHHccCCHhHCcChHHHc
Confidence 000 0111 1234578999999999999999999874
No 26
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=3.1e-49 Score=441.32 Aligned_cols=250 Identities=23% Similarity=0.309 Sum_probs=208.2
Q ss_pred cCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCceEEE
Q 045798 684 NGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDFKAI 763 (1008)
Q Consensus 684 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 763 (1008)
+.|++.+.||+|+||.||+|+++.+|+.||||++........+.+.+|+++|++++|||||++++++ .+++..|+
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~-----~~~~~~~i 225 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY-----LVGDELWV 225 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEE-----EETTEEEE
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEE-----EECCEEEE
Confidence 5699999999999999999999999999999999876666677899999999999999999999994 56678999
Q ss_pred EEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeEEccc
Q 045798 764 VYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGHIGDF 843 (1008)
Q Consensus 764 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 843 (1008)
|||||+||+|.++++.. ++++.++..|+.||+.||+|||++ +||||||||+|||++.+|.+||+||
T Consensus 226 VmEy~~gG~L~~~i~~~-----------~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DF 291 (423)
T 4fie_A 226 VMEFLEGGALTDIVTHT-----------RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDF 291 (423)
T ss_dssp EEECCTTEEHHHHHHHS-----------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCC
T ss_pred EEeCCCCCcHHHHHhcc-----------CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecC
Confidence 99999999999998643 689999999999999999999998 9999999999999999999999999
Q ss_pred CcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCc
Q 045798 844 GLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFARMALPN 923 (1008)
Q Consensus 844 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~~~~~~ 923 (1008)
|+|+........ ....+||+.|||||++.+..|+.++|||||||++|||++|+.||..... ......+....+.
T Consensus 292 Gla~~~~~~~~~----~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~--~~~~~~i~~~~~~ 365 (423)
T 4fie_A 292 GFCAQVSKEVPR----RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP--LKAMKMIRDNLPP 365 (423)
T ss_dssp TTCEECCSSCCC----BCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--HHHHHHHHHSCCC
T ss_pred ccceECCCCCcc----ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH--HHHHHHHHcCCCC
Confidence 999876543222 2346799999999999999999999999999999999999999863211 0011111111100
Q ss_pred chhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 924 QVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 924 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
. .......+.++.+++.+||+.||++|||++|+++
T Consensus 366 --------~--------------------~~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 366 --------R--------------------LKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp --------C--------------------CSCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred --------C--------------------CcccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 0 0011123456789999999999999999999876
No 27
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=4e-49 Score=468.17 Aligned_cols=454 Identities=20% Similarity=0.218 Sum_probs=249.2
Q ss_pred EEeccccCCCCccCcCccCCccCCeeeecCCCCCCCCCccccCCCCCCEEEccCCCCCCccCcccccCcCcceEeeeccc
Q 045798 58 ALDLMSKSLSGSLSPHLGNLSFLREINLSNNTIQGEIPPEFGRLFRLEALFLSNNSLVGKIPANLSYCSRLTVLCIEYNK 137 (1008)
Q Consensus 58 ~l~l~~~~l~~~l~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~ 137 (1008)
.+|+++++++ .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|+++++|++|+|++|+
T Consensus 4 ~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~ 80 (520)
T 2z7x_B 4 LVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNK 80 (520)
T ss_dssp EEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSC
T ss_pred eEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCc
Confidence 5677777777 5666555 677777777777776666677777777777777777776667777777777777777777
Q ss_pred cccCCCccccccCCCCeeecccccCCC-CCCCCCccccccchhhcccccCCCCCCccccCCCCC--cEEEecCCcc--cc
Q 045798 138 LQGRIPLEFVSLSKLKDLSLAKNKLTG-GIPPFLGNLTSLEVLSLAGNSFGRNIPDSLGQLKQL--KILAIGGNNL--SG 212 (1008)
Q Consensus 138 l~~~~p~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L--~~L~L~~n~l--~~ 212 (1008)
|+ .+|.. .+++|++|+|++|++++ .+|..|+++++|++|++++|++++ ..|..+++| +.|++++|.+ .+
T Consensus 81 l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~ 154 (520)
T 2z7x_B 81 LV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEK 154 (520)
T ss_dssp CC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSS
T ss_pred ee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccccc
Confidence 77 34444 56777777777777765 356667777777777777777654 345566666 7777777776 55
Q ss_pred cCCccccCCC-CcceeccccccccccCChhhhhcCCCCcEEEecccc-------CCCCCCcccccCCCCceeeccccccc
Q 045798 213 PIPPSIYNLS-FLVVFSVSHNQIHGSLPPSLGLLLPNLKFFQIHHNF-------FSGSIPISLSNASKLEHIEIANNNFS 284 (1008)
Q Consensus 213 ~~~~~~~~l~-~L~~L~ls~N~l~~~lp~~~~~~l~~L~~L~L~~N~-------l~~~~p~~l~~l~~L~~L~L~~N~l~ 284 (1008)
..|..+..+. ....+++++|.+.+.++...+..+++|+.|++++|. +.+.+| .+..+++|+.|++++|.+.
T Consensus 155 ~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~l~ 233 (520)
T 2z7x_B 155 EDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIETT 233 (520)
T ss_dssp CCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEEEE
T ss_pred cccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhccccccccC
Confidence 5666665554 233445555555544444444444444444444443 222222 3333334444444333333
Q ss_pred ccccccccCCCcccccccccccCCCCCCCcccccccccccCCCcEEEecCCcCCccCChhhhhh--cccceeeeeccccc
Q 045798 285 GKLSVNFGGMKNLSLLNLQFSNLGSGESDEMGFMNSLTNCSKLRVLSLGGNQFRGALPHSIANL--SSQLQILILSSNQF 362 (1008)
Q Consensus 285 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l--~~~L~~L~Ls~N~l 362 (1008)
+ ..+..+... ..+|++|++++|++
T Consensus 234 ~------------------------------------------------------~~~~~~~~~~~~~~L~~L~l~~n~l 259 (520)
T 2z7x_B 234 W------------------------------------------------------NSFIRILQLVWHTTVWYFSISNVKL 259 (520)
T ss_dssp H------------------------------------------------------HHHHHHHHHHHTSSCSEEEEEEEEE
T ss_pred H------------------------------------------------------HHHHHHHHHhhhCcccEEEeecccc
Confidence 2 111111100 01344444444444
Q ss_pred cCCCCCcc-----ccccccceEEecCccccCCcc-hhccCC---CCCceEEccCCcccccccccccCCCCcceeeccccc
Q 045798 363 YGSIPLGI-----GNLVDLYLLGMVENQFTGAIP-KEMGKL---QKLQGLDFSGNHFSGEIPSSLGNLSSLYEVFFNNNN 433 (1008)
Q Consensus 363 ~~~~p~~~-----~~l~~L~~L~L~~n~l~~~~~-~~~~~l---~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~ 433 (1008)
++.+|..+ ..+++|+.+++++|.+ .+| ..+..+ .+|+.|++++|.+.... .+..+++|++|++++|.
T Consensus 260 ~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~ 335 (520)
T 2z7x_B 260 QGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNL 335 (520)
T ss_dssp ESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSC
T ss_pred cCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcCCCcccccc--chhhCCcccEEEeECCc
Confidence 44444444 4444444444444444 222 333332 34455555554443211 11344444455555555
Q ss_pred cccccCCCCcCCCcccEeecccccccC--CcchhhhhhhhhhhhhcccCccccCCCcc-cccccccccccccccccccCC
Q 045798 434 LSGVIPFSLGNLKRLAFLEMSGNELSG--TIPEDIFNISYLSNSLNLARNHLVGIIPP-RIGNLRALRSFDVSNNDLSGE 510 (1008)
Q Consensus 434 l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~lp~~~~~~~~~~~~L~L~~N~l~~~~p~-~~~~l~~L~~Ldls~N~l~~~ 510 (1008)
+++..|..++++++|++|+|++|++++ .+|..+.. ...++.|+|++|++++.+|. .+..+++|+.|++++|.+++.
T Consensus 336 l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~-l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~ 414 (520)
T 2z7x_B 336 LTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQ-MKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDT 414 (520)
T ss_dssp CCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTT-CTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGG
T ss_pred cChhhhhhhccCCCCCEEEccCCccCccccchHHHhh-CCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcc
Confidence 544444444445555555555555442 12222222 22234455555555443443 255566666777777766666
Q ss_pred CCcccccccccceeeccCcccccchhhhhhccccccEEecCCCcccccccC-cccccccceeecccCcccccCC
Q 045798 511 IPIELGHCSSLEEIYLAGNLFHGSIPSFFNALKGVQKIDLSRNNLSGQIPI-FLEALSLEYLNLSFNDFEGKIP 583 (1008)
Q Consensus 511 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~-~~~~~~L~~L~l~~N~l~g~~p 583 (1008)
+|..+. ++|++|+|++|+|+ .+|..+..+++|+.|+|++|++++..+. ...+.+|++|++++|++++..+
T Consensus 415 ~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 485 (520)
T 2z7x_B 415 IFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 485 (520)
T ss_dssp GGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred hhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCccCHHHhccCCcccEEECcCCCCcccCC
Confidence 665553 56677777777776 5666666677777777777777643322 2445567777777777766544
No 28
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=6.2e-49 Score=416.25 Aligned_cols=247 Identities=25% Similarity=0.354 Sum_probs=190.3
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEecccc---chhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCc
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQC---EGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGND 759 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 759 (1008)
.++|++.+.||+|+||+||+|++..+|+.||||+++... ....+.+.+|++++++++|||||+++++ +.+++
T Consensus 12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~-----~~~~~ 86 (275)
T 3hyh_A 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDV-----IKSKD 86 (275)
T ss_dssp --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEE-----EECSS
T ss_pred eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEE-----EEECC
Confidence 368999999999999999999999999999999997432 2345679999999999999999999999 56677
Q ss_pred eEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeE
Q 045798 760 FKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGH 839 (1008)
Q Consensus 760 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 839 (1008)
..|+||||| +|+|.+++...+ ++++.+++.++.||+.||+|||++ +|+||||||+|||+++++.+|
T Consensus 87 ~~~ivmEy~-~g~L~~~l~~~~----------~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vk 152 (275)
T 3hyh_A 87 EIIMVIEYA-GNELFDYIVQRD----------KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVK 152 (275)
T ss_dssp EEEEEEECC-CEEHHHHHHHSC----------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEE
T ss_pred EEEEEEeCC-CCCHHHHHHHcC----------CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEE
Confidence 899999999 789999997654 799999999999999999999998 999999999999999999999
Q ss_pred EcccCcccccccccCccccccccccccccccCccccCCCCC-CcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHH
Q 045798 840 IGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEV-STNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFAR 918 (1008)
Q Consensus 840 L~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~ 918 (1008)
|+|||+|+....... ....+||+.|||||++.+..+ +.++||||+||++|||++|+.||..... .....
T Consensus 153 l~DFGla~~~~~~~~-----~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~-----~~~~~ 222 (275)
T 3hyh_A 153 IADFGLSNIMTDGNF-----LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI-----PVLFK 222 (275)
T ss_dssp ECCSSCC--------------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHH
T ss_pred EeecCCCeecCCCCc-----cCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCH-----HHHHH
Confidence 999999986543321 223569999999999998876 5799999999999999999999964211 11100
Q ss_pred hhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 919 MALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 919 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
. +.... ..++ ...+.++.+++.+||+.||++|||++|+++
T Consensus 223 ~--------i~~~~--------------~~~p------~~~s~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 223 N--------ISNGV--------------YTLP------KFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp H--------HHHTC--------------CCCC------TTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred H--------HHcCC--------------CCCC------CCCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 0 00000 0000 013456789999999999999999999976
No 29
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=7e-48 Score=461.02 Aligned_cols=483 Identities=20% Similarity=0.219 Sum_probs=288.8
Q ss_pred CeeeecCCCCCCCCCccccCCCCCCEEEccCCCCCCccCcccccCcCcceEeeeccccccCCCccccccCCCCeeecccc
Q 045798 81 REINLSNNTIQGEIPPEFGRLFRLEALFLSNNSLVGKIPANLSYCSRLTVLCIEYNKLQGRIPLEFVSLSKLKDLSLAKN 160 (1008)
Q Consensus 81 ~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n 160 (1008)
...++++++++ .+|..+. ++|++|+|++|++++..|..|+++++|++|+|++|++++..|..|.++++|++|+|++|
T Consensus 8 ~~c~~~~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n 84 (549)
T 2z81_A 8 GVCDGRSRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDN 84 (549)
T ss_dssp SEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTS
T ss_pred ceEECCCCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCC
Confidence 34577788888 6776654 78888888888888777888888888888888888888777788888888888888888
Q ss_pred cCCCCCCCCCccccccchhhcccccCCC-CCCccccCCCCCcEEEecCCc-ccccCCccccCCCCcceeccccccccccC
Q 045798 161 KLTGGIPPFLGNLTSLEVLSLAGNSFGR-NIPDSLGQLKQLKILAIGGNN-LSGPIPPSIYNLSFLVVFSVSHNQIHGSL 238 (1008)
Q Consensus 161 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~-l~~~~~~~~~~l~~L~~L~ls~N~l~~~l 238 (1008)
++++..|..|+++++|++|++++|++++ ..|..|+.+++|++|++++|. +....+..|.++++|++|++++|++++.+
T Consensus 85 ~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 164 (549)
T 2z81_A 85 HLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQ 164 (549)
T ss_dssp CCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEEC
T ss_pred ccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccC
Confidence 8886666668888888888888888865 356678888888888888887 44343467888888888888888887666
Q ss_pred ChhhhhcCCCCcEEEeccccCCCCCCcc-cccCCCCceeecccccccccc---cccccCCCcccccccccccCCCCCCCc
Q 045798 239 PPSLGLLLPNLKFFQIHHNFFSGSIPIS-LSNASKLEHIEIANNNFSGKL---SVNFGGMKNLSLLNLQFSNLGSGESDE 314 (1008)
Q Consensus 239 p~~~~~~l~~L~~L~L~~N~l~~~~p~~-l~~l~~L~~L~L~~N~l~~~~---~~~~~~l~~L~~L~L~~n~l~~~~~~~ 314 (1008)
|..+.. +++|++|++++|.+.. +|.. +..+++|++|++++|++.+.. ......+++|+.|++++|.+.....
T Consensus 165 ~~~l~~-l~~L~~L~l~~n~~~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~-- 240 (549)
T 2z81_A 165 SQSLKS-IRDIHHLTLHLSESAF-LLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESF-- 240 (549)
T ss_dssp TTTTTT-CSEEEEEEEECSBSTT-HHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHH--
T ss_pred hhhhhc-cccCceEecccCcccc-cchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHH--
Confidence 655543 6777777777777663 3333 345677777777777776542 1122345566666666655432211
Q ss_pred ccccccccccCCCcEEEecCCcCCccCC------hhhhhhcccceeeeeccccccCC-----CCCccccccccceEEecC
Q 045798 315 MGFMNSLTNCSKLRVLSLGGNQFRGALP------HSIANLSSQLQILILSSNQFYGS-----IPLGIGNLVDLYLLGMVE 383 (1008)
Q Consensus 315 ~~~~~~l~~l~~L~~L~Ls~N~l~~~~p------~~~~~l~~~L~~L~Ls~N~l~~~-----~p~~~~~l~~L~~L~L~~ 383 (1008)
..+...+..+++|+.+++++|.+.+... ..+..+ .+|+.|+++++.+... ++..+..+.+|+.|++++
T Consensus 241 ~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l-~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~ 319 (549)
T 2z81_A 241 NELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSEL-GKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVEN 319 (549)
T ss_dssp HHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCC-TTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEES
T ss_pred HHHHHHhhhhccccccccccccccccccccccchhhhhhh-cccccccccccccchhhhcccchhhhhhcccceEEEecc
Confidence 1122233455566666666665543210 111122 2355566555554321 111122234566666666
Q ss_pred ccccCCcchhc-cCCCCCceEEccCCccccccc---ccccCCCCcceeeccccccccccC--CCCcCCCcccEeeccccc
Q 045798 384 NQFTGAIPKEM-GKLQKLQGLDFSGNHFSGEIP---SSLGNLSSLYEVFFNNNNLSGVIP--FSLGNLKRLAFLEMSGNE 457 (1008)
Q Consensus 384 n~l~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~l~~N~l~~~~p--~~~~~l~~L~~L~Ls~N~ 457 (1008)
|++. .+|..+ ..+++|++|+|++|++++.+| ..+..+++|+.|++++|++++..+ ..+..+++|++|+|++|+
T Consensus 320 n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~ 398 (549)
T 2z81_A 320 SKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNT 398 (549)
T ss_dssp SCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCC
T ss_pred Cccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCC
Confidence 6655 344433 355666666666666655443 234555666666666666654322 335556666666666666
Q ss_pred ccCCcchhhhhhhhhhhhhcccCccccCCCcccccccccccccccccccccCCCCcccccccccceeeccCcccccchhh
Q 045798 458 LSGTIPEDIFNISYLSNSLNLARNHLVGIIPPRIGNLRALRSFDVSNNDLSGEIPIELGHCSSLEEIYLAGNLFHGSIPS 537 (1008)
Q Consensus 458 l~~~lp~~~~~~~~~~~~L~L~~N~l~~~~p~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 537 (1008)
++ .+|..+... ..++.|+|++|.+++ +|..+ .++|+.|||++|++++.+ ..+++|++|+|++|+|+ .+|.
T Consensus 399 l~-~lp~~~~~~-~~L~~L~Ls~N~l~~-l~~~~--~~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~ 468 (549)
T 2z81_A 399 FH-PMPDSCQWP-EKMRFLNLSSTGIRV-VKTCI--PQTLEVLDVSNNNLDSFS----LFLPRLQELYISRNKLK-TLPD 468 (549)
T ss_dssp CC-CCCSCCCCC-TTCCEEECTTSCCSC-CCTTS--CTTCSEEECCSSCCSCCC----CCCTTCCEEECCSSCCS-SCCC
T ss_pred Cc-cCChhhccc-ccccEEECCCCCccc-ccchh--cCCceEEECCCCChhhhc----ccCChhcEEECCCCccC-cCCC
Confidence 65 455443332 223455555555542 23222 135555555555555321 34455555555555555 3444
Q ss_pred hhhccccccEEecCCCcccccccCc-ccccccceeecccCcccccCC
Q 045798 538 FFNALKGVQKIDLSRNNLSGQIPIF-LEALSLEYLNLSFNDFEGKIP 583 (1008)
Q Consensus 538 ~~~~l~~L~~L~ls~N~l~~~~p~~-~~~~~L~~L~l~~N~l~g~~p 583 (1008)
...+++|+.|||++|++++.+|.. ..+.+|+.|++++|++.+..|
T Consensus 469 -~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 514 (549)
T 2z81_A 469 -ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 514 (549)
T ss_dssp -GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHH
T ss_pred -cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCc
Confidence 244555555555555555555443 344455555555555555544
No 30
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=7.1e-49 Score=432.73 Aligned_cols=276 Identities=22% Similarity=0.303 Sum_probs=214.0
Q ss_pred HHHHhcCCCCCceEeeccCeeEEEEEEcCC-----CeEEEEEEeccccc-hhhHHHHHHHHHHhhcCC-CCceeeeeccc
Q 045798 679 LLKATNGFSSTHLIGVGSFGCVYKGALDED-----GIVVAIKVINLQCE-GASKSFMAECKALKNIRH-RNLVKVITSCS 751 (1008)
Q Consensus 679 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~-----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h-~niv~~~~~~~ 751 (1008)
.+...++|++.+.||+|+||+||+|.+... ++.||||+++.... ...+.|.+|+++|.++.| ||||+++|+|.
T Consensus 59 wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~ 138 (353)
T 4ase_A 59 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACT 138 (353)
T ss_dssp HBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred cEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEE
Confidence 334457899999999999999999998543 36899999975433 445679999999999965 89999999974
Q ss_pred cccccCCceEEEEEeccCCCChhcccccCCCCC------CCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccC
Q 045798 752 SIDFQGNDFKAIVYEYMPNGSLEKWLHPHAVPK------RDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDL 825 (1008)
Q Consensus 752 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~------~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dl 825 (1008)
..++..++|||||++|+|.++++...... ........+++.+++.|+.|||+||+|||++ +||||||
T Consensus 139 ----~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRDL 211 (353)
T 4ase_A 139 ----KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDL 211 (353)
T ss_dssp ----CTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred ----ecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCcc
Confidence 34456899999999999999997643210 0011123689999999999999999999998 9999999
Q ss_pred CCCCeeecCCCCeEEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHh-CCCCCC
Q 045798 826 KPSNILLDNDLSGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVT-AKKPTD 904 (1008)
Q Consensus 826 kp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-G~~pf~ 904 (1008)
||+|||+++++.+||+|||+|+......... ......||+.|||||++.+..|+.++|||||||++|||+| |+.||.
T Consensus 212 K~~NILl~~~~~vKi~DFGlar~~~~~~~~~--~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~ 289 (353)
T 4ase_A 212 AARNILLSEKNVVKICDFGLARDIYKDPDYV--RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP 289 (353)
T ss_dssp SGGGEEECGGGCEEECCCGGGSCTTTCTTSE--EETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSST
T ss_pred CccceeeCCCCCEEECcchhhhhcccCCCce--eeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCC
Confidence 9999999999999999999998665433222 2334568999999999999999999999999999999998 999986
Q ss_pred ccccCCccHHHHHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHH
Q 045798 905 VMFEGDLNLHNFARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNV 984 (1008)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ev 984 (1008)
...... .+....... .+++. ...++.++.++|.+||+.||++||||+||
T Consensus 290 ~~~~~~-~~~~~i~~g--------------------------~~~~~----p~~~~~~~~~li~~c~~~dP~~RPt~~ei 338 (353)
T 4ase_A 290 GVKIDE-EFCRRLKEG--------------------------TRMRA----PDYTTPEMYQTMLDCWHGEPSQRPTFSEL 338 (353)
T ss_dssp TCCCSH-HHHHHHHHT--------------------------CCCCC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred CCCHHH-HHHHHHHcC--------------------------CCCCC----CccCCHHHHHHHHHHcCcChhHCcCHHHH
Confidence 432111 111111100 00000 01245678999999999999999999999
Q ss_pred HHHHHHHHHH
Q 045798 985 VHELQSVKNI 994 (1008)
Q Consensus 985 l~~L~~i~~~ 994 (1008)
++.|+.+.++
T Consensus 339 l~~L~~llq~ 348 (353)
T 4ase_A 339 VEHLGNLLQA 348 (353)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999988654
No 31
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=6e-47 Score=461.97 Aligned_cols=555 Identities=18% Similarity=0.141 Sum_probs=415.9
Q ss_pred CCCCCCCCCCCCcccceEEcCCCCeEEEEeccccCCCCccCcCccCCccCCeeeecCCCCCCCCCccccCCCCCCEEEcc
Q 045798 31 ILNSWNDSRHFCEWEGITCGRRHRRVTALDLMSKSLSGSLSPHLGNLSFLREINLSNNTIQGEIPPEFGRLFRLEALFLS 110 (1008)
Q Consensus 31 ~~~~w~~~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~~~l~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls 110 (1008)
.+++|..+.+ ..|+...|......| |=++.+++ .+|..+. +++++|||++|+|++..+.+|.++++|++|+|+
T Consensus 12 ~~~~~~~~~p-~~~~~c~~~~~~~~~---~c~~~~l~-~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls 84 (635)
T 4g8a_A 12 KLAAANSSIP-ESWEPCVEVVPNITY---QCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLS 84 (635)
T ss_dssp --------------CCSEEEETTTEE---ECTTSCCS-SCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECT
T ss_pred hhhcccCCCC-CCCCCccccCCCCEE---ECCCCCcC-ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECC
Confidence 3455544322 235444443322222 22334555 5676554 478999999999997778899999999999999
Q ss_pred CCCCCCccCcccccCcCcceEeeeccccccCCCccccccCCCCeeecccccCCCCCCCCCccccccchhhcccccCCC-C
Q 045798 111 NNSLVGKIPANLSYCSRLTVLCIEYNKLQGRIPLEFVSLSKLKDLSLAKNKLTGGIPPFLGNLTSLEVLSLAGNSFGR-N 189 (1008)
Q Consensus 111 ~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~ 189 (1008)
+|+|++..|.+|+++++|++|+|++|+|++..+..|.++++|++|+|++|++++..+..|+++++|++|+|++|+++. .
T Consensus 85 ~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~ 164 (635)
T 4g8a_A 85 RCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFK 164 (635)
T ss_dssp TCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCC
T ss_pred CCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCC
Confidence 999997778889999999999999999998777889999999999999999997777789999999999999999965 4
Q ss_pred CCccccCCCCCcEEEecCCcccccCCccccCCCCcc----eeccccccccccCChhhhhcCCCCcEEEeccccCCCC-CC
Q 045798 190 IPDSLGQLKQLKILAIGGNNLSGPIPPSIYNLSFLV----VFSVSHNQIHGSLPPSLGLLLPNLKFFQIHHNFFSGS-IP 264 (1008)
Q Consensus 190 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~----~L~ls~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~-~p 264 (1008)
.|..++.+++|++|++++|++++..+..|..+.+++ .++++.|.+. .++...+. ...+..+++.+|..... .+
T Consensus 165 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~-~i~~~~~~-~~~~~~l~l~~n~~~~~~~~ 242 (635)
T 4g8a_A 165 LPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMN-FIQPGAFK-EIRLHKLTLRNNFDSLNVMK 242 (635)
T ss_dssp CCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCC-EECTTTTT-TCEEEEEEEESCCSSHHHHH
T ss_pred CchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCccc-ccCccccc-chhhhhhhhhcccccccccc
Confidence 578889999999999999999988888887766554 6888999987 55555554 34677888888876532 33
Q ss_pred cccccCCCCceeeccccc------ccccccccccCCCcccccccccccCCCCCCCcccccccccccCCCcEEEecCCcCC
Q 045798 265 ISLSNASKLEHIEIANNN------FSGKLSVNFGGMKNLSLLNLQFSNLGSGESDEMGFMNSLTNCSKLRVLSLGGNQFR 338 (1008)
Q Consensus 265 ~~l~~l~~L~~L~L~~N~------l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~ 338 (1008)
..+..+..++...+..+. +.......+..+..+..+.+..+...... ......+..+.+++.+.+.+|.+.
T Consensus 243 ~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~---~~~~~~~~~~~~l~~l~~~~~~~~ 319 (635)
T 4g8a_A 243 TCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYL---DGIIDLFNCLTNVSSFSLVSVTIE 319 (635)
T ss_dssp HHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCE---EECTTTTGGGTTCSEEEEESCEEE
T ss_pred hhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccc---cchhhhhhhhcccccccccccccc
Confidence 455667777766654433 22333444555566666665554433221 122234566778888898888877
Q ss_pred ccCChhhhhhcccceeeeeccccccCCCCCccccccccceEEecCccccCCcchhccCCCCCceEEccCCcccc--cccc
Q 045798 339 GALPHSIANLSSQLQILILSSNQFYGSIPLGIGNLVDLYLLGMVENQFTGAIPKEMGKLQKLQGLDFSGNHFSG--EIPS 416 (1008)
Q Consensus 339 ~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~--~~p~ 416 (1008)
...+ +... ..|+.|++++|.+.+..+ ..+..|+.+++.+|.+... .....+++|+.|++++|.+.. ..+.
T Consensus 320 ~~~~--~~~~-~~L~~L~l~~~~~~~~~~---~~l~~L~~l~l~~n~~~~~--~~~~~l~~L~~L~ls~n~l~~~~~~~~ 391 (635)
T 4g8a_A 320 RVKD--FSYN-FGWQHLELVNCKFGQFPT---LKLKSLKRLTFTSNKGGNA--FSEVDLPSLEFLDLSRNGLSFKGCCSQ 391 (635)
T ss_dssp ECGG--GGSC-CCCSEEEEESCEESSCCC---CBCTTCCEEEEESCCSCCB--CCCCBCTTCCEEECCSSCCBEEEECCH
T ss_pred cccc--cccc-hhhhhhhcccccccCcCc---ccchhhhhcccccccCCCC--cccccccccccchhhcccccccccccc
Confidence 4322 2333 358899999998875443 3466788888888887643 334578899999999998853 3455
Q ss_pred cccCCCCcceeeccccccccccCCCCcCCCcccEeecccccccCCcchhhhhhhhhhhhhcccCccccCCCccccccccc
Q 045798 417 SLGNLSSLYEVFFNNNNLSGVIPFSLGNLKRLAFLEMSGNELSGTIPEDIFNISYLSNSLNLARNHLVGIIPPRIGNLRA 496 (1008)
Q Consensus 417 ~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~~~~~~~~~~~~L~L~~N~l~~~~p~~~~~l~~ 496 (1008)
.+..+.+|+.+++..|.+.. .+..+..+++|+.+++++|...+..+...+.....++.++++.|.+.+..|..+..+++
T Consensus 392 ~~~~~~~L~~L~~~~~~~~~-~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~ 470 (635)
T 4g8a_A 392 SDFGTISLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSS 470 (635)
T ss_dssp HHHSCSCCCEEECCSCSEEE-ECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTT
T ss_pred chhhhhhhhhhhcccccccc-ccccccccccccchhhhhccccccccccccccccccccccccccccccccccccccchh
Confidence 66778889999999998874 56678889999999999888887777777777777788999999999888888999999
Q ss_pred cccccccccccc-CCCCcccccccccceeeccCcccccchhhhhhccccccEEecCCCcccccccCc-ccccccceeecc
Q 045798 497 LRSFDVSNNDLS-GEIPIELGHCSSLEEIYLAGNLFHGSIPSFFNALKGVQKIDLSRNNLSGQIPIF-LEALSLEYLNLS 574 (1008)
Q Consensus 497 L~~Ldls~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~-~~~~~L~~L~l~ 574 (1008)
|+.|+|++|.+. +..|..|..+++|++|+|++|+|++.+|..|..+++|+.|+|++|+|++..|.. ..+.+|++|+|+
T Consensus 471 L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls 550 (635)
T 4g8a_A 471 LEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYS 550 (635)
T ss_dssp CCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECT
T ss_pred hhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECC
Confidence 999999998744 457888899999999999999999888999999999999999999999887765 567789999999
Q ss_pred cCcccccCCCCc-cc-CCcccceeccCCccCCCC
Q 045798 575 FNDFEGKIPAKG-IF-ANASAISVVGCNRLCGGI 606 (1008)
Q Consensus 575 ~N~l~g~~p~~~-~~-~~~~~~~~~~n~~l~g~~ 606 (1008)
+|+|++.+|..- .+ .++..+.+.+||+.|.|.
T Consensus 551 ~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~ 584 (635)
T 4g8a_A 551 LNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 584 (635)
T ss_dssp TSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGG
T ss_pred CCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCC
Confidence 999999888652 23 466777888999998863
No 32
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.3e-47 Score=455.16 Aligned_cols=460 Identities=19% Similarity=0.215 Sum_probs=345.1
Q ss_pred CeeeecCCCCCCCCCccccCCCCCCEEEccCCCCCCccCcccccCcCcceEeeeccccccCCCccccccCCCCeeecccc
Q 045798 81 REINLSNNTIQGEIPPEFGRLFRLEALFLSNNSLVGKIPANLSYCSRLTVLCIEYNKLQGRIPLEFVSLSKLKDLSLAKN 160 (1008)
Q Consensus 81 ~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n 160 (1008)
++|++++|+++ .+|..+. ++|++|+|++|.+++..|..|+++++|++|+|++|++++..|..|.++++|++|+|++|
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 57899999998 6777666 88999999999998777788899999999999999998877888888999999999999
Q ss_pred cCCCCCCCCCccccccchhhcccccCCC-CCCccccCCCCCcEEEecCCcccccCCccccCCCCc--ceeccccccc--c
Q 045798 161 KLTGGIPPFLGNLTSLEVLSLAGNSFGR-NIPDSLGQLKQLKILAIGGNNLSGPIPPSIYNLSFL--VVFSVSHNQI--H 235 (1008)
Q Consensus 161 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L--~~L~ls~N~l--~ 235 (1008)
+++ .+|.. .+++|++|+|++|++++ ..|..|+.+++|++|++++|.+++ ..+..+++| +.|++++|.+ .
T Consensus 80 ~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~ 153 (520)
T 2z7x_B 80 KLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGE 153 (520)
T ss_dssp CCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTS
T ss_pred cee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeeccccccc
Confidence 888 56655 78888888888888876 467788888888888888888774 345555555 6666666665 4
Q ss_pred ccCChhhhhcCCCCcEEEeccccCCCCCCcccccCC-CCceeeccccccccccc-ccccCCCcccccccccccCCCCCCC
Q 045798 236 GSLPPSLGLLLPNLKFFQIHHNFFSGSIPISLSNAS-KLEHIEIANNNFSGKLS-VNFGGMKNLSLLNLQFSNLGSGESD 313 (1008)
Q Consensus 236 ~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~-~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~ 313 (1008)
+..| ..+..+. +...+++++|++.+..+ ..+..+++|+.|+++.|.......
T Consensus 154 ~~~~-------------------------~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~- 207 (520)
T 2z7x_B 154 KEDP-------------------------EGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCS- 207 (520)
T ss_dssp SCCT-------------------------TTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTH-
T ss_pred cccc-------------------------ccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccc-
Confidence 3333 3333333 22334555555543222 223333444444333332100000
Q ss_pred cccccccccccCCCcEEEecCCcCCccCChhhhhhcccceeeeeccccccCCCCCccc---cccccceEEecCccccCCc
Q 045798 314 EMGFMNSLTNCSKLRVLSLGGNQFRGALPHSIANLSSQLQILILSSNQFYGSIPLGIG---NLVDLYLLGMVENQFTGAI 390 (1008)
Q Consensus 314 ~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~---~l~~L~~L~L~~n~l~~~~ 390 (1008)
.+.+.+| .+..+. +|+.|++++|.+++..+..+. ..++|+.|++++|++.|.+
T Consensus 208 ----------------------~~~~~~~-~l~~l~-~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~ 263 (520)
T 2z7x_B 208 ----------------------YFLSILA-KLQTNP-KLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQL 263 (520)
T ss_dssp ----------------------HHHHHHH-GGGGCT-TCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCC
T ss_pred ----------------------eeecchh-hhcccc-chhhccccccccCHHHHHHHHHHhhhCcccEEEeecccccCcc
Confidence 0232333 444444 477888887777643322221 2358999999999999999
Q ss_pred chhc-----cCCCCCceEEccCCccccccc-ccccCC---CCcceeeccccccccccCCCCcCCCcccEeecccccccCC
Q 045798 391 PKEM-----GKLQKLQGLDFSGNHFSGEIP-SSLGNL---SSLYEVFFNNNNLSGVIPFSLGNLKRLAFLEMSGNELSGT 461 (1008)
Q Consensus 391 ~~~~-----~~l~~L~~L~Ls~N~l~~~~p-~~~~~l---~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 461 (1008)
|..+ ..+++|+.+++++|.+ .+| ..+..+ .+|+.|++++|.+.... .+..+++|++|++++|++++.
T Consensus 264 p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~ 339 (520)
T 2z7x_B 264 DFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDT 339 (520)
T ss_dssp CCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTT
T ss_pred ccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcCCCcccccc--chhhCCcccEEEeECCccChh
Confidence 9998 9999999999999999 455 455555 67999999999987432 237899999999999999988
Q ss_pred cchhhhhhhhhhhhhcccCccccC--CCcccccccccccccccccccccCCCCcc-cccccccceeeccCcccccchhhh
Q 045798 462 IPEDIFNISYLSNSLNLARNHLVG--IIPPRIGNLRALRSFDVSNNDLSGEIPIE-LGHCSSLEEIYLAGNLFHGSIPSF 538 (1008)
Q Consensus 462 lp~~~~~~~~~~~~L~L~~N~l~~--~~p~~~~~l~~L~~Ldls~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~~p~~ 538 (1008)
+|..+.... .++.|+|++|++++ .+|..++.+++|++|||++|.+++.+|.. +..+++|++|+|++|++++.+|..
T Consensus 340 ~~~~~~~l~-~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 418 (520)
T 2z7x_B 340 VFENCGHLT-ELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRC 418 (520)
T ss_dssp TTTTCCCCS-SCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGS
T ss_pred hhhhhccCC-CCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhh
Confidence 888776554 45899999999997 66788999999999999999999767765 888999999999999999988887
Q ss_pred hhccccccEEecCCCcccccccCc-ccccccceeecccCcccccCCC-CcccCCcccceeccCCccCCCCC
Q 045798 539 FNALKGVQKIDLSRNNLSGQIPIF-LEALSLEYLNLSFNDFEGKIPA-KGIFANASAISVVGCNRLCGGIP 607 (1008)
Q Consensus 539 ~~~l~~L~~L~ls~N~l~~~~p~~-~~~~~L~~L~l~~N~l~g~~p~-~~~~~~~~~~~~~~n~~l~g~~~ 607 (1008)
+. ++|+.|||++|+++ .+|.. ..+.+|++|++++|++++.++. ...+.++..+.+.+|++.|.|..
T Consensus 419 l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~~ 486 (520)
T 2z7x_B 419 LP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 486 (520)
T ss_dssp CC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred hc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCccCHHHhccCCcccEEECcCCCCcccCCc
Confidence 75 79999999999999 56654 7788999999999999964443 34566778888899999887643
No 33
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=7.4e-48 Score=416.40 Aligned_cols=259 Identities=24% Similarity=0.364 Sum_probs=191.6
Q ss_pred cCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEecccc-chhhHHHHHHHHHHhhcCCCCceeeeeccccccc-------
Q 045798 684 NGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQC-EGASKSFMAECKALKNIRHRNLVKVITSCSSIDF------- 755 (1008)
Q Consensus 684 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~------- 755 (1008)
++|++++.||+|+||+||+|+++.+|+.||||+++... +...+.+.+|++++++++|||||++++++...+.
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 45899999999999999999999999999999997543 3445789999999999999999999998754321
Q ss_pred cCCceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCC
Q 045798 756 QGNDFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDND 835 (1008)
Q Consensus 756 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 835 (1008)
....+.|+|||||++|+|.+++....... ..++..++.|+.||+.||+|||++ +||||||||+|||++.+
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~-------~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~ 154 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCTIE-------ERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMD 154 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCSGG-------GSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTT
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCCCC-------hhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCC
Confidence 23345799999999999999997654211 456778899999999999999998 99999999999999999
Q ss_pred CCeEEcccCcccccccccCcc--------ccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccc
Q 045798 836 LSGHIGDFGLARFHQEVSNST--------LSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMF 907 (1008)
Q Consensus 836 ~~~kL~Dfg~a~~~~~~~~~~--------~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~ 907 (1008)
+.+||+|||+|+......... .......+||+.|||||++.+..|+.++|||||||++|||++ ||....
T Consensus 155 ~~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~ 231 (299)
T 4g31_A 155 DVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM 231 (299)
T ss_dssp CCEEECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH
T ss_pred CcEEEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc
Confidence 999999999998765433211 112234579999999999999999999999999999999996 765321
Q ss_pred cCCccHHHHHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 908 EGDLNLHNFARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
+............ ++ +...+..+...+++.+||+.||++|||+.|+++
T Consensus 232 ~~~~~~~~~~~~~----------------------------~p---~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 232 ERVRTLTDVRNLK----------------------------FP---PLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp HHHHHHHHHHTTC----------------------------CC---HHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHHhcCC----------------------------CC---CCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1000000000000 00 011223445678999999999999999999986
No 34
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=1.2e-47 Score=463.81 Aligned_cols=506 Identities=19% Similarity=0.257 Sum_probs=335.9
Q ss_pred ChhhHHHHHHHHHhhccCCCCCCCCCCCCC----CCCcccceEEcCCC---CeEEEEeccccCCCCccCcCccCCccCCe
Q 045798 10 EDGDRAALQAFKSMIAHEPQGILNSWNDSR----HFCEWEGITCGRRH---RRVTALDLMSKSLSGSLSPHLGNLSFLRE 82 (1008)
Q Consensus 10 ~~~~~~~l~~~k~~~~~~~~~~~~~w~~~~----~~c~w~gv~c~~~~---~~v~~l~l~~~~l~~~l~~~l~~l~~L~~ 82 (1008)
.+++...-.|++.....-. -.+|.... ..|.|..-+..+.+ ..|++- .. ..++.
T Consensus 25 ~~~~~~d~~aL~~~~~~~~---~~~w~~~~~~~~~~~~W~~~~~~c~w~~~~GV~C~------------~~----~~V~~ 85 (636)
T 4eco_A 25 TAEYIKDYLALKEIWDALN---GKNWSQQGFGTQPGANWNFNKELDMWGAQPGVSLN------------SN----GRVTG 85 (636)
T ss_dssp CCHHHHHHHHHHHHHHHTT---GGGCCCCC------CCCCCSSCGGGTTCCTTEEEC------------TT----CCEEE
T ss_pred hhhHHHHHHHHHHHHHHcC---CCCcccCCcCCccCCCCCCCCCcccccCCCCeEEc------------CC----CCEEE
Confidence 3445566677776664321 24787443 23479632211233 345541 00 46899
Q ss_pred eeecCCCCCCCCCccccCCCCCCEEEccCCCC------CC------ccCcccccCcCcceEeeeccccccCCCccccc-c
Q 045798 83 INLSNNTIQGEIPPEFGRLFRLEALFLSNNSL------VG------KIPANLSYCSRLTVLCIEYNKLQGRIPLEFVS-L 149 (1008)
Q Consensus 83 L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l------~~------~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~-l 149 (1008)
|+|++|+++|.+|++|++|++|++|+|++|.+ .+ .+|... +..|+ +++++|.+.+.+|..+.. +
T Consensus 86 L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~~~~~~ 162 (636)
T 4eco_A 86 LSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPREDFSDLI 162 (636)
T ss_dssp EECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGGSCHHH
T ss_pred EEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhhHHHHH
Confidence 99999999999999999999999999999976 22 334333 56777 899999998888877764 3
Q ss_pred CCCCeeecccccCCCCCCCCCccccccchhhcc--cccCCCCCCccccCCCCCcEEEecCCccccc--------------
Q 045798 150 SKLKDLSLAKNKLTGGIPPFLGNLTSLEVLSLA--GNSFGRNIPDSLGQLKQLKILAIGGNNLSGP-------------- 213 (1008)
Q Consensus 150 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~--~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-------------- 213 (1008)
..+..+++....+.. .....++.+++. +|++++ +|.+|+++++|++|+|++|.+++.
T Consensus 163 ~~l~~~~l~~~~~~~------~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~ 235 (636)
T 4eco_A 163 KDCINSDPQQKSIKK------SSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYA 235 (636)
T ss_dssp HHHHHHCTTSCCCCC------CCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHH
T ss_pred HHHhhcCcccccccc------ccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchh
Confidence 445555555444431 222445555555 588988 899999999999999999999986
Q ss_pred ---CCcccc--CCCCcceeccccccccccCChhhhhcCCCCcEEEecccc-CCC-CCCcccccCCCCceeeccccccccc
Q 045798 214 ---IPPSIY--NLSFLVVFSVSHNQIHGSLPPSLGLLLPNLKFFQIHHNF-FSG-SIPISLSNASKLEHIEIANNNFSGK 286 (1008)
Q Consensus 214 ---~~~~~~--~l~~L~~L~ls~N~l~~~lp~~~~~~l~~L~~L~L~~N~-l~~-~~p~~l~~l~~L~~L~L~~N~l~~~ 286 (1008)
+|..++ ++++|++|++++|.+.+.+|..+.. +++|++|+|++|. +++ .+|..+.++
T Consensus 236 ~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~-l~~L~~L~Ls~n~~l~~~~lp~~~~~L---------------- 298 (636)
T 4eco_A 236 QQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKA-LPEMQLINVACNRGISGEQLKDDWQAL---------------- 298 (636)
T ss_dssp HHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTT-CSSCCEEECTTCTTSCHHHHHHHHHHH----------------
T ss_pred cccCchhhhhcccCCCCEEEecCCcCCccChHHHhc-CCCCCEEECcCCCCCccccchHHHHhh----------------
Confidence 899999 9999999999999998777755433 5555555555555 544 444444333
Q ss_pred ccccccCCCcccccccccccCCCCCCCcccccccccccCCCcEEEecCCcCCccCCh--hhhhhcccceeeeeccccccC
Q 045798 287 LSVNFGGMKNLSLLNLQFSNLGSGESDEMGFMNSLTNCSKLRVLSLGGNQFRGALPH--SIANLSSQLQILILSSNQFYG 364 (1008)
Q Consensus 287 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~--~~~~l~~~L~~L~Ls~N~l~~ 364 (1008)
. .+..+++|++|++++|+++ .+|. .+..+. +|++|++++|+++|
T Consensus 299 --------~------------------------~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~-~L~~L~L~~N~l~g 344 (636)
T 4eco_A 299 --------A------------------------DAPVGEKIQIIYIGYNNLK-TFPVETSLQKMK-KLGMLECLYNQLEG 344 (636)
T ss_dssp --------H------------------------HSGGGGTCCEEECCSSCCS-SCCCHHHHTTCT-TCCEEECCSCCCEE
T ss_pred --------h------------------------ccccCCCCCEEECCCCcCC-ccCchhhhccCC-CCCEEeCcCCcCcc
Confidence 0 0112234444444444444 4444 444443 35555555555554
Q ss_pred CCCCccccccccceEEecCccccCCcchhccCCCC-CceEEccCCcccccccccccCCC--CcceeeccccccccccCCC
Q 045798 365 SIPLGIGNLVDLYLLGMVENQFTGAIPKEMGKLQK-LQGLDFSGNHFSGEIPSSLGNLS--SLYEVFFNNNNLSGVIPFS 441 (1008)
Q Consensus 365 ~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~-L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L~l~~N~l~~~~p~~ 441 (1008)
.+| .+..+++|+.|++++|+++ .+|..+..+++ |+.|+|++|+++ .+|..+..++ +|+.|++++|.+.+..|..
T Consensus 345 ~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 421 (636)
T 4eco_A 345 KLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKN 421 (636)
T ss_dssp ECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCS
T ss_pred chh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhh
Confidence 455 4555555555555555555 44555555555 555555555555 4454444433 5555555555555555555
Q ss_pred Cc-------CCCcccEeecccccccCCcchhhhhhhhhhhhhcccCccccCCCcccc--------ccccccccccccccc
Q 045798 442 LG-------NLKRLAFLEMSGNELSGTIPEDIFNISYLSNSLNLARNHLVGIIPPRI--------GNLRALRSFDVSNND 506 (1008)
Q Consensus 442 ~~-------~l~~L~~L~Ls~N~l~~~lp~~~~~~~~~~~~L~L~~N~l~~~~p~~~--------~~l~~L~~Ldls~N~ 506 (1008)
|. .+++|+.|+|++|+++ .+|..++.....++.|+|++|+++ .+|..+ .++++|+.|+|++|.
T Consensus 422 l~~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~ 499 (636)
T 4eco_A 422 FDPLDPTPFKGINVSSINLSNNQIS-KFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYLLTSIDLRFNK 499 (636)
T ss_dssp SCTTCSSCCCCCCEEEEECCSSCCC-SCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGGCCEEECCSSC
T ss_pred hcccccccccCCCCCEEECcCCccC-cCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccccccccccCCccEEECcCCc
Confidence 55 4555555555555555 455555544444455555555555 333332 234499999999999
Q ss_pred ccCCCCcccc--cccccceeeccCcccccchhhhhhccccccEEec------CCCcccccccCc-ccccccceeecccCc
Q 045798 507 LSGEIPIELG--HCSSLEEIYLAGNLFHGSIPSFFNALKGVQKIDL------SRNNLSGQIPIF-LEALSLEYLNLSFND 577 (1008)
Q Consensus 507 l~~~~p~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l------s~N~l~~~~p~~-~~~~~L~~L~l~~N~ 577 (1008)
++ .+|..+. .+++|++|+|++|+|++ +|..+..+++|+.|+| ++|++.+.+|.. ..+.+|++|+|++|.
T Consensus 500 l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~ 577 (636)
T 4eco_A 500 LT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSND 577 (636)
T ss_dssp CC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSC
T ss_pred CC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCc
Confidence 99 8999997 99999999999999997 9999999999999999 568899999977 678899999999999
Q ss_pred ccccCCCCcccCCcccceeccCCccCC
Q 045798 578 FEGKIPAKGIFANASAISVVGCNRLCG 604 (1008)
Q Consensus 578 l~g~~p~~~~~~~~~~~~~~~n~~l~g 604 (1008)
+ +.+|.. .+.++..+.+.+|+..|-
T Consensus 578 l-~~ip~~-~~~~L~~L~Ls~N~l~~~ 602 (636)
T 4eco_A 578 I-RKVNEK-ITPNISVLDIKDNPNISI 602 (636)
T ss_dssp C-CBCCSC-CCTTCCEEECCSCTTCEE
T ss_pred C-CccCHh-HhCcCCEEECcCCCCccc
Confidence 9 778875 336777777888876653
No 35
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=1.6e-48 Score=418.91 Aligned_cols=243 Identities=24% Similarity=0.296 Sum_probs=191.1
Q ss_pred cCCCCCceEeeccCeeEEEEEEc---CCCeEEEEEEecccc--chhhHHHHHHHHHHhhcCCCCceeeeeccccccccCC
Q 045798 684 NGFSSTHLIGVGSFGCVYKGALD---EDGIVVAIKVINLQC--EGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGN 758 (1008)
Q Consensus 684 ~~y~~~~~lg~G~~g~Vy~~~~~---~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 758 (1008)
++|++.+.||+|+||+||+|++. .+++.||||+++... .....++.+|++++++++|||||+++++ +.++
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~-----~~~~ 98 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYA-----FQTE 98 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEE-----EEET
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEE-----EEEC
Confidence 57999999999999999999873 367899999997432 2334578999999999999999999999 4567
Q ss_pred ceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCe
Q 045798 759 DFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSG 838 (1008)
Q Consensus 759 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 838 (1008)
+..|+|||||+||+|.+++...+ .+++.+++.++.||+.||+|||++ +||||||||+|||+++++.+
T Consensus 99 ~~~~ivmEy~~gg~L~~~l~~~~----------~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~v 165 (304)
T 3ubd_A 99 GKLYLILDFLRGGDLFTRLSKEV----------MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHI 165 (304)
T ss_dssp TEEEEEECCCTTCEEHHHHHHHC----------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCE
T ss_pred CEEEEEEEcCCCCCHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCE
Confidence 78999999999999999997654 789999999999999999999998 99999999999999999999
Q ss_pred EEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHH
Q 045798 839 HIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFAR 918 (1008)
Q Consensus 839 kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~ 918 (1008)
||+|||+|+........ ....+||+.|||||++.+..|+.++||||+||++|||++|+.||......+ .......
T Consensus 166 Kl~DFGla~~~~~~~~~----~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~-~~~~i~~ 240 (304)
T 3ubd_A 166 KLTDFGLSKESIDHEKK----AYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKE-TMTMILK 240 (304)
T ss_dssp EEESSEEEEC-----CC----CCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHH
T ss_pred EecccccceeccCCCcc----ccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHH-HHHHHHc
Confidence 99999999865433221 234579999999999999999999999999999999999999996421110 0000000
Q ss_pred hhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCH
Q 045798 919 MALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNM 981 (1008)
Q Consensus 919 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~ 981 (1008)
... .++ ...+.++.+++.+||+.||++|||+
T Consensus 241 ------------~~~--------------~~p------~~~s~~~~~li~~~L~~dP~~R~ta 271 (304)
T 3ubd_A 241 ------------AKL--------------GMP------QFLSPEAQSLLRMLFKRNPANRLGA 271 (304)
T ss_dssp ------------CCC--------------CCC------TTSCHHHHHHHHHHTCSSGGGSTTC
T ss_pred ------------CCC--------------CCC------CcCCHHHHHHHHHHcccCHHHCCCC
Confidence 000 000 1234567899999999999999996
No 36
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=4.3e-46 Score=454.37 Aligned_cols=513 Identities=22% Similarity=0.182 Sum_probs=423.5
Q ss_pred CeEEEEeccccCCCCccCcCccCCccCCeeeecCCCCCCCCCccccCCCCCCEEEccCCCCCCccCcccccCcCcceEee
Q 045798 54 RRVTALDLMSKSLSGSLSPHLGNLSFLREINLSNNTIQGEIPPEFGRLFRLEALFLSNNSLVGKIPANLSYCSRLTVLCI 133 (1008)
Q Consensus 54 ~~v~~l~l~~~~l~~~l~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L 133 (1008)
..++.|||++|.+++..+.+|..+++|++|+|++|+|+++.|.+|.++++|++|+|++|+|++..+..|+++++|++|+|
T Consensus 52 ~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~L 131 (635)
T 4g8a_A 52 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 131 (635)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEEC
T ss_pred cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEEC
Confidence 46899999999999666678999999999999999999888889999999999999999999777788999999999999
Q ss_pred eccccccCCCccccccCCCCeeecccccCCC-CCCCCCccccccchhhcccccCCCCCCccccCCCCC----cEEEecCC
Q 045798 134 EYNKLQGRIPLEFVSLSKLKDLSLAKNKLTG-GIPPFLGNLTSLEVLSLAGNSFGRNIPDSLGQLKQL----KILAIGGN 208 (1008)
Q Consensus 134 s~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L----~~L~L~~n 208 (1008)
++|++++..+..|+++++|++|+|++|++++ ..|..++.+++|++|+|++|++++..+..|..+.++ ..++++.|
T Consensus 132 s~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n 211 (635)
T 4g8a_A 132 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 211 (635)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTC
T ss_pred CCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccC
Confidence 9999998888889999999999999999985 357888999999999999999999888888776654 47899999
Q ss_pred cccccCCccccCCCCcceeccccccccccCChhhhhcCCCCcEEEeccccCC------CCCCcccccCCCCceeeccccc
Q 045798 209 NLSGPIPPSIYNLSFLVVFSVSHNQIHGSLPPSLGLLLPNLKFFQIHHNFFS------GSIPISLSNASKLEHIEIANNN 282 (1008)
Q Consensus 209 ~l~~~~~~~~~~l~~L~~L~ls~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~------~~~p~~l~~l~~L~~L~L~~N~ 282 (1008)
.++...+..+.. ..+..+++++|.....++...+..+..++...+..+... ......+..+..+...++..+.
T Consensus 212 ~l~~i~~~~~~~-~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~ 290 (635)
T 4g8a_A 212 PMNFIQPGAFKE-IRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAY 290 (635)
T ss_dssp CCCEECTTTTTT-CEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEEC
T ss_pred cccccCcccccc-hhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhh
Confidence 999766655544 567889999998776677777777888888777654432 2334455566666666666554
Q ss_pred cccc---ccccccCCCcccccccccccCCCCCCCcccccccccccCCCcEEEecCCcCCccCChhhhhhcccceeeeecc
Q 045798 283 FSGK---LSVNFGGMKNLSLLNLQFSNLGSGESDEMGFMNSLTNCSKLRVLSLGGNQFRGALPHSIANLSSQLQILILSS 359 (1008)
Q Consensus 283 l~~~---~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~ 359 (1008)
.... ....+..+.+++.+.+..+.+.... .+.....|+.|++++|.+.+..+..+ ..|+.+++++
T Consensus 291 ~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~--------~~~~~~~L~~L~l~~~~~~~~~~~~l----~~L~~l~l~~ 358 (635)
T 4g8a_A 291 LDYYLDGIIDLFNCLTNVSSFSLVSVTIERVK--------DFSYNFGWQHLELVNCKFGQFPTLKL----KSLKRLTFTS 358 (635)
T ss_dssp CCSCEEECTTTTGGGTTCSEEEEESCEEEECG--------GGGSCCCCSEEEEESCEESSCCCCBC----TTCCEEEEES
T ss_pred hcccccchhhhhhhhccccccccccccccccc--------ccccchhhhhhhcccccccCcCcccc----hhhhhccccc
Confidence 4322 2344666778888888777665432 35566789999999999885444322 2588999999
Q ss_pred ccccCCCCCccccccccceEEecCccccC--CcchhccCCCCCceEEccCCcccccccccccCCCCcceeeccccccccc
Q 045798 360 NQFYGSIPLGIGNLVDLYLLGMVENQFTG--AIPKEMGKLQKLQGLDFSGNHFSGEIPSSLGNLSSLYEVFFNNNNLSGV 437 (1008)
Q Consensus 360 N~l~~~~p~~~~~l~~L~~L~L~~n~l~~--~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 437 (1008)
|.+... .....+++|+.|++++|.+.. ..+..+..+.+|+.|+++.|.+. ..+..+..+++|+.+++.+|.....
T Consensus 359 n~~~~~--~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~-~~~~~~~~l~~L~~l~l~~~~~~~~ 435 (635)
T 4g8a_A 359 NKGGNA--FSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQM 435 (635)
T ss_dssp CCSCCB--CCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEE-EECSCCTTCTTCCEEECTTSEEEST
T ss_pred ccCCCC--cccccccccccchhhccccccccccccchhhhhhhhhhhccccccc-cccccccccccccchhhhhcccccc
Confidence 988643 345678999999999998863 45677888999999999999998 5667788999999999998887765
Q ss_pred cC-CCCcCCCcccEeecccccccCCcchhhhhhhhhhhhhcccCcccc-CCCcccccccccccccccccccccCCCCccc
Q 045798 438 IP-FSLGNLKRLAFLEMSGNELSGTIPEDIFNISYLSNSLNLARNHLV-GIIPPRIGNLRALRSFDVSNNDLSGEIPIEL 515 (1008)
Q Consensus 438 ~p-~~~~~l~~L~~L~Ls~N~l~~~lp~~~~~~~~~~~~L~L~~N~l~-~~~p~~~~~l~~L~~Ldls~N~l~~~~p~~~ 515 (1008)
.+ ..|..+++++.+++++|.+++ ++...+.....++.|+|++|.+. +..|..|..+++|+.|||++|++++..|..|
T Consensus 436 ~~~~~~~~l~~l~~l~ls~n~l~~-~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f 514 (635)
T 4g8a_A 436 SEFSVFLSLRNLIYLDISHTHTRV-AFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAF 514 (635)
T ss_dssp TSSCTTTTCTTCCEEECTTSCCEE-CCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTT
T ss_pred cccccccccccccccccccccccc-ccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHH
Confidence 54 568889999999999999984 55555666666789999999854 4678899999999999999999999899999
Q ss_pred ccccccceeeccCcccccchhhhhhccccccEEecCCCcccccccCc-ccc-cccceeecccCcccccCC
Q 045798 516 GHCSSLEEIYLAGNLFHGSIPSFFNALKGVQKIDLSRNNLSGQIPIF-LEA-LSLEYLNLSFNDFEGKIP 583 (1008)
Q Consensus 516 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~-~~~-~~L~~L~l~~N~l~g~~p 583 (1008)
+.+++|++|+|++|+|++..|..|..+++|+.|||++|+|++.+|.. ..+ .+|++|+|++|++...-.
T Consensus 515 ~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~ 584 (635)
T 4g8a_A 515 NSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 584 (635)
T ss_dssp TTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGG
T ss_pred cCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCC
Confidence 99999999999999999989999999999999999999999999987 444 579999999999998643
No 37
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=1.2e-46 Score=460.98 Aligned_cols=450 Identities=18% Similarity=0.216 Sum_probs=255.2
Q ss_pred ccCCeeeecCCCCCCCCCccccCCCCCCEEEc-cCCCCCCccCcccccC----cCc--ceEee----------ecccccc
Q 045798 78 SFLREINLSNNTIQGEIPPEFGRLFRLEALFL-SNNSLVGKIPANLSYC----SRL--TVLCI----------EYNKLQG 140 (1008)
Q Consensus 78 ~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L-s~n~l~~~~p~~l~~l----~~L--~~L~L----------s~n~l~~ 140 (1008)
..++.|+|++|+++|.+|++|++|++|++|+| ++|.++|..|-..... ..+ +.+.. ....+.+
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~ 402 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD 402 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhH
Confidence 46888999999999999999999999999999 8888876644221111 000 00000 0001110
Q ss_pred C-----------CCccccccCCCCeeeccc--ccCCCCCCCCCccccccchhhcccccCCC-----------------CC
Q 045798 141 R-----------IPLEFVSLSKLKDLSLAK--NKLTGGIPPFLGNLTSLEVLSLAGNSFGR-----------------NI 190 (1008)
Q Consensus 141 ~-----------~p~~~~~l~~L~~L~L~~--n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-----------------~~ 190 (1008)
. .+........++.+.+.. |++++ +|..|+++++|++|+|++|++++ .+
T Consensus 403 l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~i 481 (876)
T 4ecn_A 403 LLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYE 481 (876)
T ss_dssp HHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHT
T ss_pred HHHHHhhhCccccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccC
Confidence 1 111112233445555544 77776 77788888888888888888876 37
Q ss_pred Ccccc--CCCCCcEEEecCCcccccCCccccCCCCcceecccccc-ccc-cCChhhhh------cCCCCcEEEeccccCC
Q 045798 191 PDSLG--QLKQLKILAIGGNNLSGPIPPSIYNLSFLVVFSVSHNQ-IHG-SLPPSLGL------LLPNLKFFQIHHNFFS 260 (1008)
Q Consensus 191 ~~~~~--~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ls~N~-l~~-~lp~~~~~------~l~~L~~L~L~~N~l~ 260 (1008)
|..++ .+++|++|+|++|.+.+.+|..|.++++|+.|+|++|+ ++| .+|..+.. .+++|++|+|++|.++
T Consensus 482 P~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~ 561 (876)
T 4ecn_A 482 NEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE 561 (876)
T ss_dssp TSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC
T ss_pred ChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC
Confidence 77766 88888888888888877888888888888888888887 776 67766543 2357777777777777
Q ss_pred CCCCc--ccccCCCCceeecccccccccccccccCCCcccccccccccCCCCCCCcccccccccccCC-CcEEEecCCcC
Q 045798 261 GSIPI--SLSNASKLEHIEIANNNFSGKLSVNFGGMKNLSLLNLQFSNLGSGESDEMGFMNSLTNCSK-LRVLSLGGNQF 337 (1008)
Q Consensus 261 ~~~p~--~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~l~~-L~~L~Ls~N~l 337 (1008)
.+|. .+.++++|++|+|++|++. .+| .|..+++|+.|+|++|++..++ ..+..+++ |+.|+|++|++
T Consensus 562 -~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~~lp-------~~l~~l~~~L~~L~Ls~N~L 631 (876)
T 4ecn_A 562 -EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIEEIP-------EDFCAFTDQVEGLGFSHNKL 631 (876)
T ss_dssp -BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCSCCC-------TTSCEECTTCCEEECCSSCC
T ss_pred -ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccccch-------HHHhhccccCCEEECcCCCC
Confidence 6666 7777777777777777777 444 6666666666666666655322 23455555 66666666666
Q ss_pred CccCChhhhhhc-ccceeeeeccccccCCCCCcc---c--cccccceEEecCccccCCcchhccCCCCCceEEccCCccc
Q 045798 338 RGALPHSIANLS-SQLQILILSSNQFYGSIPLGI---G--NLVDLYLLGMVENQFTGAIPKEMGKLQKLQGLDFSGNHFS 411 (1008)
Q Consensus 338 ~~~~p~~~~~l~-~~L~~L~Ls~N~l~~~~p~~~---~--~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 411 (1008)
+ .+|..+.... .+|+.|+|++|++++.+|... . .+.+|+.|+|++|+++...+..+..+++|+.|+|++|+++
T Consensus 632 ~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~ 710 (876)
T 4ecn_A 632 K-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMT 710 (876)
T ss_dssp C-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCS
T ss_pred C-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCC
Confidence 5 4554444332 125566666666555443211 1 1224555555555555222222234455555555555554
Q ss_pred ccccccccCCCCcceeeccccccccccCCCCcCCCcccEeecccccccCCcchhhhhhhhhhhhhcccCccccCCCcccc
Q 045798 412 GEIPSSLGNLSSLYEVFFNNNNLSGVIPFSLGNLKRLAFLEMSGNELSGTIPEDIFNISYLSNSLNLARNHLVGIIPPRI 491 (1008)
Q Consensus 412 ~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~~~~~~~~~~~~L~L~~N~l~~~~p~~~ 491 (1008)
.+|..+.... +..+.++++|+.|+|++|+++ .+|..++.
T Consensus 711 -~ip~~~~~~~----------------~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~----------------------- 749 (876)
T 4ecn_A 711 -SIPENSLKPK----------------DGNYKNTYLLTTIDLRFNKLT-SLSDDFRA----------------------- 749 (876)
T ss_dssp -CCCTTSSSCT----------------TSCCTTGGGCCEEECCSSCCC-CCCGGGST-----------------------
T ss_pred -ccChHHhccc----------------cccccccCCccEEECCCCCCc-cchHHhhh-----------------------
Confidence 3333222111 000112336666666666665 33333220
Q ss_pred cccccccccccccccccCCCCcccccccccceeecc------CcccccchhhhhhccccccEEecCCCcccccccCcccc
Q 045798 492 GNLRALRSFDVSNNDLSGEIPIELGHCSSLEEIYLA------GNLFHGSIPSFFNALKGVQKIDLSRNNLSGQIPIFLEA 565 (1008)
Q Consensus 492 ~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~L~------~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~ 565 (1008)
..+++|+.|+|++|.+++ +|..++.+++|+.|+|+ +|++.+.+|..|..+++|+.|+|++|++ +.+|....
T Consensus 750 ~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~- 826 (876)
T 4ecn_A 750 TTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT- 826 (876)
T ss_dssp TTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC-
T ss_pred ccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc-
Confidence 033344444444444442 34444444444444443 3555556666666666666666666666 45555422
Q ss_pred cccceeecccCcccccCC
Q 045798 566 LSLEYLNLSFNDFEGKIP 583 (1008)
Q Consensus 566 ~~L~~L~l~~N~l~g~~p 583 (1008)
.+|+.|+|++|++....+
T Consensus 827 ~~L~~LdLs~N~l~~i~~ 844 (876)
T 4ecn_A 827 PQLYILDIADNPNISIDV 844 (876)
T ss_dssp SSSCEEECCSCTTCEEEC
T ss_pred CCCCEEECCCCCCCccCh
Confidence 356666666666555443
No 38
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.7e-46 Score=418.68 Aligned_cols=283 Identities=20% Similarity=0.219 Sum_probs=207.8
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEecccc--chhhHHHHHHHHHHhhcCCCCceeeeeccccc-cccCCc
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQC--EGASKSFMAECKALKNIRHRNLVKVITSCSSI-DFQGND 759 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-~~~~~~ 759 (1008)
.++|++++.||+|+||+||+|++..+|+.||||+++... ....+.+.+|+++|++++|||||++++++... .+.+.+
T Consensus 53 ~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~ 132 (398)
T 4b99_A 53 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK 132 (398)
T ss_dssp CSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred CCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCC
Confidence 367999999999999999999999999999999997443 33456789999999999999999999987643 244567
Q ss_pred eEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeE
Q 045798 760 FKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGH 839 (1008)
Q Consensus 760 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 839 (1008)
..|+|||||+ |+|.+++...+ ++++..++.++.||+.||+|||++ +||||||||+|||++.++.+|
T Consensus 133 ~~~ivmE~~~-g~L~~~i~~~~----------~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~K 198 (398)
T 4b99_A 133 SVYVVLDLME-SDLHQIIHSSQ----------PLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELK 198 (398)
T ss_dssp CEEEEEECCS-EEHHHHHTSSS----------CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEE
T ss_pred EEEEEEeCCC-CCHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEE
Confidence 8999999995 78999997654 799999999999999999999998 999999999999999999999
Q ss_pred EcccCcccccccccCccccccccccccccccCccccCCC-CCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHH
Q 045798 840 IGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGS-EVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFAR 918 (1008)
Q Consensus 840 L~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~ 918 (1008)
|+|||+|+................+||+.|||||++.+. .++.++||||+||++|||++|++||......+ .+.....
T Consensus 199 i~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~-~l~~I~~ 277 (398)
T 4b99_A 199 IGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVH-QLQLIMM 277 (398)
T ss_dssp ECCCTTCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHH-HHHHHHH
T ss_pred EeecceeeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHH-HHHHHHH
Confidence 999999987654433333334456799999999998875 46899999999999999999999996432111 1111111
Q ss_pred hhCCcchhhhhcccccCchHHhhhhhhhhhccccchh-----HHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 919 MALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINS-----RLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 919 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
......... ......... ......++...+. ....+.++.+|+.+||+.||++||||+|+++
T Consensus 278 ~~g~p~~~~-~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 344 (398)
T 4b99_A 278 VLGTPSPAV-IQAVGAERV-----RAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344 (398)
T ss_dssp HHCCCCGGG-TC-----CH-----HHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred hcCCCChHH-hhhhhhhhh-----hhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 111111000 000000000 0000000000000 0123456789999999999999999999976
No 39
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=4.8e-46 Score=445.26 Aligned_cols=219 Identities=20% Similarity=0.196 Sum_probs=161.1
Q ss_pred EEEeccccCCCCccCcCccCCccCCeeeecCCCCCCCCCccccCCCCCCEEEccCCCCCCccCcccccCcCcceEeeecc
Q 045798 57 TALDLMSKSLSGSLSPHLGNLSFLREINLSNNTIQGEIPPEFGRLFRLEALFLSNNSLVGKIPANLSYCSRLTVLCIEYN 136 (1008)
Q Consensus 57 ~~l~l~~~~l~~~l~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n 136 (1008)
..+|+++++++ .+|..+. ++|++|+|++|.+++..|.+|.++++|++|+|++|++++..|..|+++++|++|+|++|
T Consensus 34 ~~l~ls~~~L~-~ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 110 (562)
T 3a79_B 34 SMVDYSNRNLT-HVPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHN 110 (562)
T ss_dssp CEEECTTSCCC-SCCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTS
T ss_pred cEEEcCCCCCc-cCCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCC
Confidence 67899999998 4777665 78999999999999777788999999999999999999888888999999999999999
Q ss_pred ccccCCCccccccCCCCeeecccccCCCC-CCCCCccccccchhhcccccCCCCCCccccCCCCC--cEEEecCCcc--c
Q 045798 137 KLQGRIPLEFVSLSKLKDLSLAKNKLTGG-IPPFLGNLTSLEVLSLAGNSFGRNIPDSLGQLKQL--KILAIGGNNL--S 211 (1008)
Q Consensus 137 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L--~~L~L~~n~l--~ 211 (1008)
+|+ .+|.. .+++|++|+|++|++++. +|..|+++++|++|++++|+++.. .+..+++| +.|++++|.+ +
T Consensus 111 ~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~~ 184 (562)
T 3a79_B 111 RLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHIK 184 (562)
T ss_dssp CCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCCC
T ss_pred cCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeeccccccc
Confidence 998 45655 788999999999998853 457888889999999999888653 45555555 8889988888 7
Q ss_pred ccCCccccCCC-CcceeccccccccccCChhhhhcCCCCcEEEeccccCC----CCCCcccccCCCCceeeccccccc
Q 045798 212 GPIPPSIYNLS-FLVVFSVSHNQIHGSLPPSLGLLLPNLKFFQIHHNFFS----GSIPISLSNASKLEHIEIANNNFS 284 (1008)
Q Consensus 212 ~~~~~~~~~l~-~L~~L~ls~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~----~~~p~~l~~l~~L~~L~L~~N~l~ 284 (1008)
+..|..+..+. ..-.+++++|.+.+.++...+..+++|+.|++++|... ...+..+..+++|+.|+++++.+.
T Consensus 185 ~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~ 262 (562)
T 3a79_B 185 GGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETT 262 (562)
T ss_dssp SSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEEC
T ss_pred ccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCc
Confidence 77777777755 12245777777776666555555566666666665311 011123344445555555444443
No 40
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=1.9e-44 Score=431.51 Aligned_cols=463 Identities=20% Similarity=0.209 Sum_probs=325.4
Q ss_pred cCCeeeecCCCCCCCCCccccCCCCCCEEEccCCCCCCccCcccccCcCcceEeeeccccccCCCccccccCCCCeeecc
Q 045798 79 FLREINLSNNTIQGEIPPEFGRLFRLEALFLSNNSLVGKIPANLSYCSRLTVLCIEYNKLQGRIPLEFVSLSKLKDLSLA 158 (1008)
Q Consensus 79 ~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~ 158 (1008)
..+++++++|+++ .+|..+. ++|++|+|++|.+++..|..|+++++|++|+|++|++++..|..|.++++|++|+|+
T Consensus 32 ~~~~l~ls~~~L~-~ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 108 (562)
T 3a79_B 32 LESMVDYSNRNLT-HVPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVS 108 (562)
T ss_dssp -CCEEECTTSCCC-SCCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECT
T ss_pred CCcEEEcCCCCCc-cCCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECC
Confidence 3489999999999 5777664 899999999999998888899999999999999999998889999999999999999
Q ss_pred cccCCCCCCCCCccccccchhhcccccCCCC-CCccccCCCCCcEEEecCCcccccCCccccCCCCc--ceeccccccc-
Q 045798 159 KNKLTGGIPPFLGNLTSLEVLSLAGNSFGRN-IPDSLGQLKQLKILAIGGNNLSGPIPPSIYNLSFL--VVFSVSHNQI- 234 (1008)
Q Consensus 159 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L--~~L~ls~N~l- 234 (1008)
+|+++ .+|.. .+++|++|+|++|++++. .|..|+++++|++|++++|.+++. .+..+++| +.|++++|.+
T Consensus 109 ~N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~ 182 (562)
T 3a79_B 109 HNRLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYH 182 (562)
T ss_dssp TSCCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCC
T ss_pred CCcCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeeccccc
Confidence 99999 66766 789999999999999763 468899999999999999998853 34444444 8888888877
Q ss_pred -cccCChhhhhcCCCCcEEEeccccCCCCCCc-ccccCCCCceeecccccccccccccccCCCcccccccccccCCCCCC
Q 045798 235 -HGSLPPSLGLLLPNLKFFQIHHNFFSGSIPI-SLSNASKLEHIEIANNNFSGKLSVNFGGMKNLSLLNLQFSNLGSGES 312 (1008)
Q Consensus 235 -~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~-~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 312 (1008)
++..|..+...-...-.+++++|.+.+.++. .+..+++|+.|++++|+.. ..
T Consensus 183 ~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~------------------------~~-- 236 (562)
T 3a79_B 183 IKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDEN------------------------CQ-- 236 (562)
T ss_dssp CCSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTT------------------------HH--
T ss_pred ccccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccc------------------------cc--
Confidence 6555554432111122456666666554433 3445566666666665311 00
Q ss_pred CcccccccccccCCCcEEEecCCcCCccCChhhhhh--cccceeeeeccccccCCCCCcc-----ccccccceEEecCcc
Q 045798 313 DEMGFMNSLTNCSKLRVLSLGGNQFRGALPHSIANL--SSQLQILILSSNQFYGSIPLGI-----GNLVDLYLLGMVENQ 385 (1008)
Q Consensus 313 ~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l--~~~L~~L~Ls~N~l~~~~p~~~-----~~l~~L~~L~L~~n~ 385 (1008)
........+..+++|+.|+++++.+.+.....+... ..+|++|++++|.+++.+|..+ ..+..|..+++..|.
T Consensus 237 ~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~ 316 (562)
T 3a79_B 237 RLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQV 316 (562)
T ss_dssp HHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECC
T ss_pred hHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEEEEeccEeeccccchhhhcccccchheehhhcccce
Confidence 000112234455566666666555543211111110 1258888888888887777776 677777777777776
Q ss_pred ccCCcc-hhccCC---CCCceEEccCCcccccccccccCCCCcceeeccccccccccCCCCcCCCcccEeecccccccCC
Q 045798 386 FTGAIP-KEMGKL---QKLQGLDFSGNHFSGEIPSSLGNLSSLYEVFFNNNNLSGVIPFSLGNLKRLAFLEMSGNELSGT 461 (1008)
Q Consensus 386 l~~~~~-~~~~~l---~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 461 (1008)
+ .+| ..+..+ .+|+.|++++|.+.... ....+++|++|++++|.+++..|..++++++|+.|+|++|++++
T Consensus 317 ~--~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~- 391 (562)
T 3a79_B 317 F--LFSKEALYSVFAEMNIKMLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKN- 391 (562)
T ss_dssp C--SSCHHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCB-
T ss_pred e--ecChhhhhhhhccCcceEEEccCCCccccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCC-
Confidence 6 333 333322 56888888888775221 12567778888888888887777788888888888888888873
Q ss_pred cch--hhhhhhhhhhhhcccCccccCCCcc-cccccccccccccccccccCCCCcccccccccceeeccCcccccchhhh
Q 045798 462 IPE--DIFNISYLSNSLNLARNHLVGIIPP-RIGNLRALRSFDVSNNDLSGEIPIELGHCSSLEEIYLAGNLFHGSIPSF 538 (1008)
Q Consensus 462 lp~--~~~~~~~~~~~L~L~~N~l~~~~p~-~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 538 (1008)
+|. ..+.....++.|+|++|++++.+|. .+..+++|+.|+|++|.+++.+|..+. ++|++|+|++|+|+ .+|..
T Consensus 392 ~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~ 468 (562)
T 3a79_B 392 FFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKD 468 (562)
T ss_dssp TTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTT
T ss_pred cccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChh
Confidence 432 2223334456777777777774554 477788888888888888877776654 68888888888888 67777
Q ss_pred hhccccccEEecCCCcccccccC-cccccccceeecccCcccccCCC
Q 045798 539 FNALKGVQKIDLSRNNLSGQIPI-FLEALSLEYLNLSFNDFEGKIPA 584 (1008)
Q Consensus 539 ~~~l~~L~~L~ls~N~l~~~~p~-~~~~~~L~~L~l~~N~l~g~~p~ 584 (1008)
+..+++|+.|+|++|++++..+. ...+.+|+.|++++|++++..|.
T Consensus 469 ~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~~ 515 (562)
T 3a79_B 469 VTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPG 515 (562)
T ss_dssp TTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCSCCBCCCHHH
T ss_pred hcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecCCCcCCCcch
Confidence 77888888888888888854443 35667788888888888887663
No 41
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=6e-45 Score=404.73 Aligned_cols=202 Identities=25% Similarity=0.350 Sum_probs=170.6
Q ss_pred HHhcCCCCCceEeeccCeeEEEEEEc---CCCeEEEEEEeccccchhhHHHHHHHHHHhhc-CCCCceeeeecccccccc
Q 045798 681 KATNGFSSTHLIGVGSFGCVYKGALD---EDGIVVAIKVINLQCEGASKSFMAECKALKNI-RHRNLVKVITSCSSIDFQ 756 (1008)
Q Consensus 681 ~~~~~y~~~~~lg~G~~g~Vy~~~~~---~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 756 (1008)
...++|++.+.||+|+||+||+|+++ .+++.||+|++... ....++.+|+++++.+ +||||++++++ +.
T Consensus 18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~--~~~~~~~~E~~~l~~~~~h~nIv~l~~~-----~~ 90 (361)
T 4f9c_A 18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT--SHPIRIAAELQCLTVAGGQDNVMGVKYC-----FR 90 (361)
T ss_dssp GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT--SCHHHHHHHHHHHHHTCSBTTBCCCSEE-----EE
T ss_pred CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc--cCHHHHHHHHHHHHHhcCCCCCceEEEE-----EE
Confidence 34678999999999999999999874 35789999998654 2345688999999998 79999999998 56
Q ss_pred CCceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCC-
Q 045798 757 GNDFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDND- 835 (1008)
Q Consensus 757 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~- 835 (1008)
++++.|+||||+++|+|.+++. .+++.+++.++.||+.||+|||++ |||||||||+|||++.+
T Consensus 91 ~~~~~~lvmE~~~g~~L~~~~~-------------~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~ 154 (361)
T 4f9c_A 91 KNDHVVIAMPYLEHESFLDILN-------------SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRL 154 (361)
T ss_dssp ETTEEEEEEECCCCCCHHHHHT-------------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTT
T ss_pred ECCEEEEEEeCCCcccHHHHHc-------------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCC
Confidence 6788999999999999999984 588999999999999999999998 99999999999999876
Q ss_pred CCeEEcccCcccccccccCcc------------------------ccccccccccccccCccccCCC-CCCcccchhhHH
Q 045798 836 LSGHIGDFGLARFHQEVSNST------------------------LSSSVGVKGTIGYTAPEYGLGS-EVSTNGDVYSYG 890 (1008)
Q Consensus 836 ~~~kL~Dfg~a~~~~~~~~~~------------------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG 890 (1008)
+.+||+|||+|+......... .......+||+.|+|||++.+. .|+.++||||+|
T Consensus 155 ~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG 234 (361)
T 4f9c_A 155 KKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAG 234 (361)
T ss_dssp TEEEECCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHH
T ss_pred CeEEECcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhH
Confidence 799999999998654322110 0112235699999999998876 489999999999
Q ss_pred HHHHHHHhCCCCCCc
Q 045798 891 ILLLEMVTAKKPTDV 905 (1008)
Q Consensus 891 ~vl~elltG~~pf~~ 905 (1008)
|++|||++|+.||..
T Consensus 235 ~il~ell~G~~Pf~~ 249 (361)
T 4f9c_A 235 VIFLSLLSGRYPFYK 249 (361)
T ss_dssp HHHHHHHHTCSSSSC
T ss_pred HHHHHHHHCCCCCCC
Confidence 999999999999964
No 42
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=1.7e-43 Score=411.88 Aligned_cols=250 Identities=22% Similarity=0.281 Sum_probs=198.5
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEecccc---chhhHHH---HHHHHHHhhcCCCCceeeeecccccccc
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQC---EGASKSF---MAECKALKNIRHRNLVKVITSCSSIDFQ 756 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~---~~E~~~l~~l~h~niv~~~~~~~~~~~~ 756 (1008)
.++|++.+.||+|+||+||+|+++.+|+.||||+++... ......+ ..++.+++.++|||||+++++ ++
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~-----f~ 262 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYA-----FH 262 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEE-----EE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEE-----EE
Confidence 467999999999999999999999999999999996321 1222233 344667777899999999999 57
Q ss_pred CCceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCC
Q 045798 757 GNDFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDL 836 (1008)
Q Consensus 757 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 836 (1008)
+++..|+|||||+||+|.+++...+ .+++..++.++.||+.||+|||++ +||||||||+|||++.+|
T Consensus 263 ~~~~lylVmEy~~GGdL~~~l~~~~----------~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G 329 (689)
T 3v5w_A 263 TPDKLSFILDLMNGGDLHYHLSQHG----------VFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHG 329 (689)
T ss_dssp CSSEEEEEECCCCSCBHHHHHHHHC----------CCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTS
T ss_pred ECCEEEEEEecCCCCcHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCC
Confidence 7788999999999999999997654 799999999999999999999998 999999999999999999
Q ss_pred CeEEcccCcccccccccCccccccccccccccccCccccCC-CCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHH
Q 045798 837 SGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLG-SEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHN 915 (1008)
Q Consensus 837 ~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~ 915 (1008)
++||+|||+|+...... ....+||+.|||||++.+ ..|+.++||||+||++|||++|++||......+. ..
T Consensus 330 ~vKL~DFGlA~~~~~~~------~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~--~~ 401 (689)
T 3v5w_A 330 HVRISDLGLACDFSKKK------PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK--HE 401 (689)
T ss_dssp CEEECCCTTCEECSSCC------CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCH--HH
T ss_pred CEEecccceeeecCCCC------CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH--HH
Confidence 99999999998664432 234579999999999864 5799999999999999999999999974322111 11
Q ss_pred HHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCC-----HHHHHH
Q 045798 916 FARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMN-----MTNVVH 986 (1008)
Q Consensus 916 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt-----~~evl~ 986 (1008)
..... .... ..++ ...+.++.+++.+||+.||.+|++ ++||++
T Consensus 402 i~~~i--------~~~~--------------~~~p------~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 402 IDRMT--------LTMA--------------VELP------DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp HHHHH--------HHCC--------------CCCC------TTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred HHHhh--------cCCC--------------CCCC------ccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 10000 0000 0000 123456789999999999999998 677654
No 43
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=4.8e-43 Score=413.56 Aligned_cols=253 Identities=21% Similarity=0.295 Sum_probs=207.7
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCceEE
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 762 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 762 (1008)
.++|++.+.||+|+||.||+|+++.+|+.||+|++........+.+.+|+++|+.++|||||+++++ +.+++..|
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~-----~~~~~~~~ 230 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDA-----FEDDNEMV 230 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEE-----EECSSEEE
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEE-----EEECCEEE
Confidence 4689999999999999999999999999999999987666667789999999999999999999999 56778899
Q ss_pred EEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCC--CCeEE
Q 045798 763 IVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDND--LSGHI 840 (1008)
Q Consensus 763 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~--~~~kL 840 (1008)
+|||||+||+|.+++..... .+++.++..++.||+.||+|||++ +|+||||||+|||++.+ +.+||
T Consensus 231 iv~E~~~gg~L~~~i~~~~~---------~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl 298 (573)
T 3uto_A 231 MIYEFMSGGELFEKVADEHN---------KMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKL 298 (573)
T ss_dssp EEEECCCCCBHHHHHTCTTS---------CEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEE
T ss_pred EEEeecCCCcHHHHHHHhCC---------CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEE
Confidence 99999999999999865421 689999999999999999999998 99999999999999854 89999
Q ss_pred cccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHHhh
Q 045798 841 GDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFARMA 920 (1008)
Q Consensus 841 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~~~ 920 (1008)
+|||+|+....... ....+||+.|||||++.+..|+.++||||+||++|||++|+.||......+ .+.......
T Consensus 299 ~DFG~a~~~~~~~~-----~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~-~~~~i~~~~ 372 (573)
T 3uto_A 299 IDFGLTAHLDPKQS-----VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDE-TLRNVKSCD 372 (573)
T ss_dssp CCCSSCEECCTTSE-----EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH-HHHHHHTTC
T ss_pred eeccceeEccCCCc-----eeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH-HHHHHHhCC
Confidence 99999987654322 123469999999999999999999999999999999999999986432110 000000000
Q ss_pred CCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 921 LPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 921 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
. .. ........+.++.+|+.+||+.||.+|||++|+++
T Consensus 373 ~------------~~----------------~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 373 W------------NM----------------DDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp C------------CC----------------CSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred C------------CC----------------CcccccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 0 00 00001123456789999999999999999999986
No 44
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=2.5e-42 Score=379.69 Aligned_cols=294 Identities=24% Similarity=0.450 Sum_probs=275.0
Q ss_pred ccCChhhHHHHHHHHHhhccCCCCCCCCCCCCCCCCc--ccceEEcCCC--CeEEEEeccccCCCC--ccCcCccCCccC
Q 045798 7 AALEDGDRAALQAFKSMIAHEPQGILNSWNDSRHFCE--WEGITCGRRH--RRVTALDLMSKSLSG--SLSPHLGNLSFL 80 (1008)
Q Consensus 7 ~~~~~~~~~~l~~~k~~~~~~~~~~~~~w~~~~~~c~--w~gv~c~~~~--~~v~~l~l~~~~l~~--~l~~~l~~l~~L 80 (1008)
+.|.++|++||++||+++. ||. .+++|+.+++||. |.||+|+... ++|+.|+|+++.++| .+|+.+..+++|
T Consensus 1 ~~c~~~~~~aL~~~k~~~~-~~~-~l~~W~~~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L 78 (313)
T 1ogq_A 1 ELCNPQDKQALLQIKKDLG-NPT-TLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYL 78 (313)
T ss_dssp CCSCHHHHHHHHHHHHHTT-CCG-GGTTCCTTSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTC
T ss_pred CCCCHHHHHHHHHHHHhcC-Ccc-cccCCCCCCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCC
Confidence 3589999999999999995 665 6899998889998 9999998654 799999999999999 899999999999
Q ss_pred CeeeecC-CCCCCCCCccccCCCCCCEEEccCCCCCCccCcccccCcCcceEeeeccccccCCCccccccCCCCeeeccc
Q 045798 81 REINLSN-NTIQGEIPPEFGRLFRLEALFLSNNSLVGKIPANLSYCSRLTVLCIEYNKLQGRIPLEFVSLSKLKDLSLAK 159 (1008)
Q Consensus 81 ~~L~L~~-n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~ 159 (1008)
++|+|++ |++.+.+|..|.++++|++|+|++|++++.+|..|+.+++|++|+|++|.+++.+|..|..+++|++|+|++
T Consensus 79 ~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 158 (313)
T 1ogq_A 79 NFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDG 158 (313)
T ss_dssp SEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCS
T ss_pred CeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcC
Confidence 9999995 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCcccc-ccchhhcccccCCCCCCccccCCCCCcEEEecCCcccccCCccccCCCCcceeccccccccccC
Q 045798 160 NKLTGGIPPFLGNLT-SLEVLSLAGNSFGRNIPDSLGQLKQLKILAIGGNNLSGPIPPSIYNLSFLVVFSVSHNQIHGSL 238 (1008)
Q Consensus 160 n~l~~~~~~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~l 238 (1008)
|++++.+|..++.++ +|++|++++|++++..|..|..++ |+.|++++|.+++..|..|..+++|+.|++++|++++.+
T Consensus 159 N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 237 (313)
T 1ogq_A 159 NRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDL 237 (313)
T ss_dssp SCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBG
T ss_pred CcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeec
Confidence 999999999999998 999999999999989999999998 999999999999999999999999999999999998666
Q ss_pred ChhhhhcCCCCcEEEeccccCCCCCCcccccCCCCceeecccccccccccccccCCCccccccccccc
Q 045798 239 PPSLGLLLPNLKFFQIHHNFFSGSIPISLSNASKLEHIEIANNNFSGKLSVNFGGMKNLSLLNLQFSN 306 (1008)
Q Consensus 239 p~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~ 306 (1008)
|. +..+++|++|+|++|.+++.+|..+..+++|++|++++|++++..|.. ..+++|+.|++++|.
T Consensus 238 ~~--~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 238 GK--VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNK 302 (313)
T ss_dssp GG--CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSS
T ss_pred Cc--ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC-ccccccChHHhcCCC
Confidence 65 455899999999999999999999999999999999999999888876 778888888888876
No 45
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=1.3e-41 Score=396.70 Aligned_cols=392 Identities=20% Similarity=0.204 Sum_probs=252.8
Q ss_pred CeeeecCCCCCCCCCccccCCCCCCEEEccCCCCCCccCcccccCcCcceEeeeccccccCC-CccccccCCCCeeeccc
Q 045798 81 REINLSNNTIQGEIPPEFGRLFRLEALFLSNNSLVGKIPANLSYCSRLTVLCIEYNKLQGRI-PLEFVSLSKLKDLSLAK 159 (1008)
Q Consensus 81 ~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~-p~~~~~l~~L~~L~L~~ 159 (1008)
+.++.++++++ .+|. + .++|++|+|++|.+++..|..|+++++|++|+|++|.+.+.+ +..|.++++|++|+|++
T Consensus 13 ~~~~c~~~~l~-~lp~-l--~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~ 88 (455)
T 3v47_A 13 YNAICINRGLH-QVPE-L--PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDY 88 (455)
T ss_dssp TEEECCSSCCS-SCCC-C--CTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTT
T ss_pred cccCcCCCCcc-cCCC-C--CCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCC
Confidence 45677777776 5554 2 267777777777777666777777777777777777775333 45566666666666666
Q ss_pred ccCCCCCCCCCccccccchhhcccccCCCCCCcc--ccCCCCCcEEEecCCcccccCCccccCCCCcceecccccccccc
Q 045798 160 NKLTGGIPPFLGNLTSLEVLSLAGNSFGRNIPDS--LGQLKQLKILAIGGNNLSGPIPPSIYNLSFLVVFSVSHNQIHGS 237 (1008)
Q Consensus 160 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~--~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~ 237 (1008)
|++++..|..|+++++|++|+|++|++++..+.. |..+++|++|+|++|.+++..|.
T Consensus 89 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--------------------- 147 (455)
T 3v47_A 89 NQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPA--------------------- 147 (455)
T ss_dssp CTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCC---------------------
T ss_pred CccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcc---------------------
Confidence 6666555666666666666666666665433332 55555555555555555544443
Q ss_pred CChhhhhcCCCCcEEEeccccCCCCCCcccccC--CCCceeecccccccccccccccCCCcccccccccccCCCCCCCcc
Q 045798 238 LPPSLGLLLPNLKFFQIHHNFFSGSIPISLSNA--SKLEHIEIANNNFSGKLSVNFGGMKNLSLLNLQFSNLGSGESDEM 315 (1008)
Q Consensus 238 lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l--~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 315 (1008)
.++..+++|++|+|++|.+.+..|..+..+ .+|+.|++++|.+.+..+..+..
T Consensus 148 ---~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~---------------------- 202 (455)
T 3v47_A 148 ---SFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGW---------------------- 202 (455)
T ss_dssp ---GGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTH----------------------
T ss_pred ---cccCCCCcccEEeCCCCcccccChhhhhccccccccccccccCcccccchhhccc----------------------
Confidence 333334444444444444444444444444 46666666666666544332210
Q ss_pred cccccccccCCCcEEEecCCcCCccCChhhhhhc--ccceeeeeccccccCCCCCccccccccceEEecCccccCCcchh
Q 045798 316 GFMNSLTNCSKLRVLSLGGNQFRGALPHSIANLS--SQLQILILSSNQFYGSIPLGIGNLVDLYLLGMVENQFTGAIPKE 393 (1008)
Q Consensus 316 ~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~--~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~ 393 (1008)
.....+..+++|+.|++++|++.+..|..+.... .+|+.|++++|.+.+... ..+.+.+..+..
T Consensus 203 ~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~--------------~~~~~~~~~~~~ 268 (455)
T 3v47_A 203 EKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSF--------------GHTNFKDPDNFT 268 (455)
T ss_dssp HHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCT--------------TCCSSCCCCTTT
T ss_pred cccccccccceeeeEecCCCcccccchhhhhccccccceeeEeecccccccccc--------------chhhhccCcccc
Confidence 0111234567888899999998887887776652 358888888887664211 122233233333
Q ss_pred ccC--CCCCceEEccCCcccccccccccCCCCcceeeccccccccccCCCCcCCCcccEeecccccccCCcchhhhhhhh
Q 045798 394 MGK--LQKLQGLDFSGNHFSGEIPSSLGNLSSLYEVFFNNNNLSGVIPFSLGNLKRLAFLEMSGNELSGTIPEDIFNISY 471 (1008)
Q Consensus 394 ~~~--l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~~~~~~~~ 471 (1008)
+.. .++|+.|+|++|.+.+..|..+..+++|++|++++|.+.+..|..|.++++|++|+|++|++++
T Consensus 269 ~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~----------- 337 (455)
T 3v47_A 269 FKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGS----------- 337 (455)
T ss_dssp TGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCE-----------
T ss_pred cccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCC-----------
Confidence 333 3578888888888887777778888888888888888887777778888888888888777763
Q ss_pred hhhhhcccCccccCCCcccccccccccccccccccccCCCCcccccccccceeeccCcccccchhhhhhccccccEEecC
Q 045798 472 LSNSLNLARNHLVGIIPPRIGNLRALRSFDVSNNDLSGEIPIELGHCSSLEEIYLAGNLFHGSIPSFFNALKGVQKIDLS 551 (1008)
Q Consensus 472 ~~~~L~L~~N~l~~~~p~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls 551 (1008)
..|..|+.+++|+.|||++|.+++..|..+..+++|++|+|++|+|++..+..|..+++|+.|+|+
T Consensus 338 --------------~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 403 (455)
T 3v47_A 338 --------------IDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLH 403 (455)
T ss_dssp --------------ECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECC
T ss_pred --------------cChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEcc
Confidence 345556677777777777777776667777777777777777777776566666777777777777
Q ss_pred CCcccccccC
Q 045798 552 RNNLSGQIPI 561 (1008)
Q Consensus 552 ~N~l~~~~p~ 561 (1008)
+|++++..|.
T Consensus 404 ~N~l~~~~~~ 413 (455)
T 3v47_A 404 TNPWDCSCPR 413 (455)
T ss_dssp SSCBCCCTTT
T ss_pred CCCcccCCCc
Confidence 7777776663
No 46
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=1.4e-42 Score=400.65 Aligned_cols=402 Identities=22% Similarity=0.268 Sum_probs=196.4
Q ss_pred ccCCccCCeeeecCCCCCCCCCccccCCCCCCEEEccCCCCCCccCcccccCcCcceEeeeccccccCCCccccccCCCC
Q 045798 74 LGNLSFLREINLSNNTIQGEIPPEFGRLFRLEALFLSNNSLVGKIPANLSYCSRLTVLCIEYNKLQGRIPLEFVSLSKLK 153 (1008)
Q Consensus 74 l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~ 153 (1008)
-...++|++|++++|++ +.+|++|+++++|++|++++|.+++.+|..++++++|+.+++++|.. .+|+
T Consensus 7 ~~~~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~-----------~~l~ 74 (454)
T 1jl5_A 7 NVSNTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLD-----------RQAH 74 (454)
T ss_dssp ----------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHH-----------HTCS
T ss_pred ccccccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhc-----------cCCC
Confidence 33456777777777777 47777777777777777777777777777777777776666665542 4567
Q ss_pred eeecccccCCCCCCCCCccccccchhhcccccCCCCCCccccCCCCCcEEEecCCcccccCCccccCCCCcceecccccc
Q 045798 154 DLSLAKNKLTGGIPPFLGNLTSLEVLSLAGNSFGRNIPDSLGQLKQLKILAIGGNNLSGPIPPSIYNLSFLVVFSVSHNQ 233 (1008)
Q Consensus 154 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ls~N~ 233 (1008)
+|++++|.+++ +|.. .++|++|++++|++++ +|.. +++|++|++++|++++. +.. .++|++|++++|+
T Consensus 75 ~L~l~~~~l~~-lp~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~l-~~~---~~~L~~L~L~~n~ 142 (454)
T 1jl5_A 75 ELELNNLGLSS-LPEL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKAL-SDL---PPLLEYLGVSNNQ 142 (454)
T ss_dssp EEECTTSCCSC-CCSC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSCC-CSC---CTTCCEEECCSSC
T ss_pred EEEecCCcccc-CCCC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCcc-cCC---CCCCCEEECcCCC
Confidence 78888888774 4442 2567777777777765 4432 36677777777777642 211 1466666666666
Q ss_pred ccccCChhhhhcCCCCcEEEeccccCCCCCCcccccCCCCceeecccccccccccccccCCCcccccccccccCCCCCCC
Q 045798 234 IHGSLPPSLGLLLPNLKFFQIHHNFFSGSIPISLSNASKLEHIEIANNNFSGKLSVNFGGMKNLSLLNLQFSNLGSGESD 313 (1008)
Q Consensus 234 l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 313 (1008)
++ .+|. +..+++|++|++++|++++ +|..+ .+|++|++++|++++. + .|.+++
T Consensus 143 l~-~lp~--~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~l-~-~~~~l~------------------ 195 (454)
T 1jl5_A 143 LE-KLPE--LQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEEL-P-ELQNLP------------------ 195 (454)
T ss_dssp CS-SCCC--CTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSSC-C-CCTTCT------------------
T ss_pred CC-CCcc--cCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCcC-c-cccCCC------------------
Confidence 66 3552 3445666666666666653 34322 3566666666665542 2 344444
Q ss_pred cccccccccccCCCcEEEecCCcCCccCChhhhhhcccceeeeeccccccCCCCCccccccccceEEecCccccCCcchh
Q 045798 314 EMGFMNSLTNCSKLRVLSLGGNQFRGALPHSIANLSSQLQILILSSNQFYGSIPLGIGNLVDLYLLGMVENQFTGAIPKE 393 (1008)
Q Consensus 314 ~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~ 393 (1008)
+|+.|++++|++++ +|... .+|++|++++|.++ .+|. +..+++|+.|++++|++++ +|..
T Consensus 196 ------------~L~~L~l~~N~l~~-l~~~~----~~L~~L~l~~n~l~-~lp~-~~~l~~L~~L~l~~N~l~~-l~~~ 255 (454)
T 1jl5_A 196 ------------FLTAIYADNNSLKK-LPDLP----LSLESIVAGNNILE-ELPE-LQNLPFLTTIYADNNLLKT-LPDL 255 (454)
T ss_dssp ------------TCCEEECCSSCCSS-CCCCC----TTCCEEECCSSCCS-SCCC-CTTCTTCCEEECCSSCCSS-CCSC
T ss_pred ------------CCCEEECCCCcCCc-CCCCc----CcccEEECcCCcCC-cccc-cCCCCCCCEEECCCCcCCc-cccc
Confidence 45555555555542 22211 13555555555555 4442 5555555555555555553 2321
Q ss_pred ccCCCCCceEEccCCcccccccccccCCCCcceeeccccccccccCCCCcCCCcccEeecccccccCCcchhhhhhhhhh
Q 045798 394 MGKLQKLQGLDFSGNHFSGEIPSSLGNLSSLYEVFFNNNNLSGVIPFSLGNLKRLAFLEMSGNELSGTIPEDIFNISYLS 473 (1008)
Q Consensus 394 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~~~~~~~~~~ 473 (1008)
+++|+.|++++|++++ +|.. +++|++|++++|.+++. |.. .++|+.|++++|++++ +|. ....+
T Consensus 256 ---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~l-~~~---~~~L~~L~l~~N~l~~-i~~----~~~~L 319 (454)
T 1jl5_A 256 ---PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSGL-SEL---PPNLYYLNASSNEIRS-LCD----LPPSL 319 (454)
T ss_dssp ---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSEE-SCC---CTTCCEEECCSSCCSE-ECC----CCTTC
T ss_pred ---ccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCcc-cCc---CCcCCEEECcCCcCCc-ccC----CcCcC
Confidence 2455666666666553 3332 24555666666665542 211 1455666666666552 221 11233
Q ss_pred hhhcccCccccCCCcccccccccccccccccccccCCCCcccccccccceeeccCccccc--chhhhhhccccccEEecC
Q 045798 474 NSLNLARNHLVGIIPPRIGNLRALRSFDVSNNDLSGEIPIELGHCSSLEEIYLAGNLFHG--SIPSFFNALKGVQKIDLS 551 (1008)
Q Consensus 474 ~~L~L~~N~l~~~~p~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~ls 551 (1008)
+.|++++|++++ +|.. +++|+.|++++|.++ .+|. .+++|++|+|++|++++ .+|.+++.+ +
T Consensus 320 ~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~-~lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~L--------~ 383 (454)
T 1jl5_A 320 EELNVSNNKLIE-LPAL---PPRLERLIASFNHLA-EVPE---LPQNLKQLHVEYNPLREFPDIPESVEDL--------R 383 (454)
T ss_dssp CEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCSSCCCCCTTCCEE--------E
T ss_pred CEEECCCCcccc-cccc---CCcCCEEECCCCccc-cccc---hhhhccEEECCCCCCCcCCCChHHHHhh--------h
Confidence 455555555554 4433 356677777777776 4555 35667777777777776 566655443 2
Q ss_pred CCcccccccCcccccccceeecccCcccc
Q 045798 552 RNNLSGQIPIFLEALSLEYLNLSFNDFEG 580 (1008)
Q Consensus 552 ~N~l~~~~p~~~~~~~L~~L~l~~N~l~g 580 (1008)
.|.+.|.+|.. ..+|+.|++++|+++|
T Consensus 384 ~n~~~~~i~~~--~~~L~~L~ls~N~l~~ 410 (454)
T 1jl5_A 384 MNSHLAEVPEL--PQNLKQLHVETNPLRE 410 (454)
T ss_dssp CCC--------------------------
T ss_pred hcccccccccc--cCcCCEEECCCCcCCc
Confidence 34455555442 2356666666666665
No 47
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=1.3e-41 Score=396.64 Aligned_cols=376 Identities=20% Similarity=0.237 Sum_probs=303.1
Q ss_pred CCCCccCcCccCCccCCeeeecCCCCCCCCCccccCCCCCCEEEccCCCCCCcc-CcccccCcCcceEeeeccccccCCC
Q 045798 65 SLSGSLSPHLGNLSFLREINLSNNTIQGEIPPEFGRLFRLEALFLSNNSLVGKI-PANLSYCSRLTVLCIEYNKLQGRIP 143 (1008)
Q Consensus 65 ~l~~~l~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~-p~~l~~l~~L~~L~Ls~n~l~~~~p 143 (1008)
+++ .+|. +. ++|++|+|++|++++..|..|.++++|++|+|++|.+.+.+ |..|..+++|++|+|++|++++..|
T Consensus 21 ~l~-~lp~-l~--~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~ 96 (455)
T 3v47_A 21 GLH-QVPE-LP--AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLET 96 (455)
T ss_dssp CCS-SCCC-CC--TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECT
T ss_pred Ccc-cCCC-CC--CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccCh
Confidence 444 4555 32 78999999999999888899999999999999999997555 5679999999999999999998889
Q ss_pred ccccccCCCCeeecccccCCCCCCCC--CccccccchhhcccccCCCCCCcc-ccCCCCCcEEEecCCcccccCCccccC
Q 045798 144 LEFVSLSKLKDLSLAKNKLTGGIPPF--LGNLTSLEVLSLAGNSFGRNIPDS-LGQLKQLKILAIGGNNLSGPIPPSIYN 220 (1008)
Q Consensus 144 ~~~~~l~~L~~L~L~~n~l~~~~~~~--~~~l~~L~~L~L~~n~l~~~~~~~-~~~l~~L~~L~L~~n~l~~~~~~~~~~ 220 (1008)
..|.++++|++|+|++|++++..+.. |+++++|++|+|++|++++..|.. |..+++|++|++++|.+++..+..+..
T Consensus 97 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~ 176 (455)
T 3v47_A 97 GAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLN 176 (455)
T ss_dssp TTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGG
T ss_pred hhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhc
Confidence 99999999999999999998755444 889999999999999998887776 889999999999999999888888887
Q ss_pred C--CCcceeccccccccccCChhhh--------hcCCCCcEEEeccccCCCCCCcccccC---CCCceeecccccccccc
Q 045798 221 L--SFLVVFSVSHNQIHGSLPPSLG--------LLLPNLKFFQIHHNFFSGSIPISLSNA---SKLEHIEIANNNFSGKL 287 (1008)
Q Consensus 221 l--~~L~~L~ls~N~l~~~lp~~~~--------~~l~~L~~L~L~~N~l~~~~p~~l~~l---~~L~~L~L~~N~l~~~~ 287 (1008)
+ .+|+.|++++|.+.+ ++.... ..+++|++|+|++|.+.+..|..+... ++|+.|++++|.+.+..
T Consensus 177 l~~~~L~~L~l~~n~l~~-~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~ 255 (455)
T 3v47_A 177 FQGKHFTLLRLSSITLQD-MNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSS 255 (455)
T ss_dssp GTTCEEEEEECTTCBCTT-CSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCC
T ss_pred cccccccccccccCcccc-cchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccc
Confidence 6 688999999999874 333221 124678888888888877676666544 77788888877665431
Q ss_pred cccccCCCcccccccccccCCCCCCCcccccccccccCCCcEEEecCCcCCccCChhhhhhcccceeeeeccccccCCCC
Q 045798 288 SVNFGGMKNLSLLNLQFSNLGSGESDEMGFMNSLTNCSKLRVLSLGGNQFRGALPHSIANLSSQLQILILSSNQFYGSIP 367 (1008)
Q Consensus 288 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p 367 (1008)
. ..+.+.......+ .-...++|+.|++++|++.+..|..+..+. +|++|+|++|++++..|
T Consensus 256 ~--------------~~~~~~~~~~~~~----~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~-~L~~L~Ls~n~l~~~~~ 316 (455)
T 3v47_A 256 F--------------GHTNFKDPDNFTF----KGLEASGVKTCDLSKSKIFALLKSVFSHFT-DLEQLTLAQNEINKIDD 316 (455)
T ss_dssp T--------------TCCSSCCCCTTTT----GGGTTSCCCEEECCSSCCCEECTTTTTTCT-TCCEEECTTSCCCEECT
T ss_pred c--------------chhhhccCccccc----ccccccCceEEEecCccccccchhhcccCC-CCCEEECCCCcccccCh
Confidence 1 1111111111100 011236899999999999988888888876 59999999999998888
Q ss_pred CccccccccceEEecCccccCCcchhccCCCCCceEEccCCcccccccccccCCCCcceeeccccccccccCCCCcCCCc
Q 045798 368 LGIGNLVDLYLLGMVENQFTGAIPKEMGKLQKLQGLDFSGNHFSGEIPSSLGNLSSLYEVFFNNNNLSGVIPFSLGNLKR 447 (1008)
Q Consensus 368 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~ 447 (1008)
..|..+++|+.|+|++|++++..|..|..+++|++|+|++|++++..|..|.++++|++|++++|++++..+..|..+++
T Consensus 317 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 396 (455)
T 3v47_A 317 NAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTS 396 (455)
T ss_dssp TTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTT
T ss_pred hHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCc
Confidence 88999999999999999998888888999999999999999999888889999999999999999999877778889999
Q ss_pred ccEeecccccccCCcch
Q 045798 448 LAFLEMSGNELSGTIPE 464 (1008)
Q Consensus 448 L~~L~Ls~N~l~~~lp~ 464 (1008)
|+.|+|++|++++..|.
T Consensus 397 L~~L~l~~N~l~~~~~~ 413 (455)
T 3v47_A 397 LQKIWLHTNPWDCSCPR 413 (455)
T ss_dssp CCEEECCSSCBCCCTTT
T ss_pred ccEEEccCCCcccCCCc
Confidence 99999999999987773
No 48
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=1.4e-41 Score=376.55 Aligned_cols=286 Identities=35% Similarity=0.557 Sum_probs=225.1
Q ss_pred CCHHHHHHHhcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhhcCCCCceeeeeccccc
Q 045798 674 MSYKSLLKATNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKNIRHRNLVKVITSCSSI 753 (1008)
Q Consensus 674 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 753 (1008)
+++.++..++++|++.+.||+|+||.||+|.+. +++.||||++........+.+.+|++++++++||||++++++|
T Consensus 29 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~--- 104 (321)
T 2qkw_B 29 VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLR-DGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFC--- 104 (321)
T ss_dssp -CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECT-TCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEEC---
T ss_pred ecHHHHHHHHhccCccceeecCCCeeEEEEEEC-CCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEE---
Confidence 344455667899999999999999999999975 7899999999876666778899999999999999999999995
Q ss_pred cccCCceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeec
Q 045798 754 DFQGNDFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLD 833 (1008)
Q Consensus 754 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~ 833 (1008)
..++..++||||+++|+|.+++...... ...+++.+++.++.|++.||+|||+. +|+||||||+||+++
T Consensus 105 --~~~~~~~lv~e~~~~~~L~~~l~~~~~~------~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~ 173 (321)
T 2qkw_B 105 --DERNEMILIYKYMENGNLKRHLYGSDLP------TMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLD 173 (321)
T ss_dssp --CCTTCCEEEEECCTTCBTGGGSSSSCCC------SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEEC
T ss_pred --cCCCeEEEEEEcCCCCcHHHHHhccCCC------ccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEEC
Confidence 4566789999999999999999765422 12689999999999999999999998 999999999999999
Q ss_pred CCCCeEEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCC-cc
Q 045798 834 NDLSGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGD-LN 912 (1008)
Q Consensus 834 ~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~-~~ 912 (1008)
.++.+||+|||+++......... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+ ..
T Consensus 174 ~~~~~kl~Dfg~~~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~ 251 (321)
T 2qkw_B 174 ENFVPKITDFGISKKGTELDQTH--LSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVN 251 (321)
T ss_dssp TTCCEEECCCTTCEECSSSSCCC--CBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCC
T ss_pred CCCCEEEeecccccccccccccc--cccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHH
Confidence 99999999999998654322211 1223458999999999988899999999999999999999999997543222 12
Q ss_pred HHHHHHh-hCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHHHHHH
Q 045798 913 LHNFARM-ALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHELQSV 991 (1008)
Q Consensus 913 ~~~~~~~-~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~i 991 (1008)
...+... .........+++.+.. ....+++..+.+++.+||+.||++|||+.||++.|+.+
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~ 313 (321)
T 2qkw_B 252 LAEWAVESHNNGQLEQIVDPNLAD------------------KIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYA 313 (321)
T ss_dssp HHHHTHHHHTTTCCCSSSSSSCTT------------------CSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHhhhccccccHHHhcChhhcc------------------ccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence 2222111 1111111222221110 11235778899999999999999999999999999987
Q ss_pred HHH
Q 045798 992 KNI 994 (1008)
Q Consensus 992 ~~~ 994 (1008)
...
T Consensus 314 l~~ 316 (321)
T 2qkw_B 314 LRL 316 (321)
T ss_dssp HHS
T ss_pred hhc
Confidence 653
No 49
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=2e-41 Score=391.11 Aligned_cols=421 Identities=23% Similarity=0.257 Sum_probs=198.7
Q ss_pred CeEEEEeccccCCCCccCcCccCCccCCeeeecCCCCCCCCCccccCCCCCCEEEccCCCCCCccCcccccCcCcceEee
Q 045798 54 RRVTALDLMSKSLSGSLSPHLGNLSFLREINLSNNTIQGEIPPEFGRLFRLEALFLSNNSLVGKIPANLSYCSRLTVLCI 133 (1008)
Q Consensus 54 ~~v~~l~l~~~~l~~~l~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L 133 (1008)
.+++.++++++.+ |.+|++++.+++|++|++++|.++|.+|.+++++.+|+.+++++|.. .++++|++
T Consensus 11 ~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~-----------~~l~~L~l 78 (454)
T 1jl5_A 11 TFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLD-----------RQAHELEL 78 (454)
T ss_dssp ------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHH-----------HTCSEEEC
T ss_pred ccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhc-----------cCCCEEEe
Confidence 4788999999999 79999999999999999999999999999999999874444444321 33444555
Q ss_pred eccccccCCCccccccCCCCeeecccccCCCCCCCCCccccccchhhcccccCCCCCCccccCCCCCcEEEecCCccccc
Q 045798 134 EYNKLQGRIPLEFVSLSKLKDLSLAKNKLTGGIPPFLGNLTSLEVLSLAGNSFGRNIPDSLGQLKQLKILAIGGNNLSGP 213 (1008)
Q Consensus 134 s~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 213 (1008)
++|.+++ +|.. .++|++|++++|++++ +|..+ ++|++|++++|++++ ++.. .++|++|++++|++++
T Consensus 79 ~~~~l~~-lp~~---~~~L~~L~l~~n~l~~-lp~~~---~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~- 145 (454)
T 1jl5_A 79 NNLGLSS-LPEL---PPHLESLVASCNSLTE-LPELP---QSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK- 145 (454)
T ss_dssp TTSCCSC-CCSC---CTTCSEEECCSSCCSS-CCCCC---TTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-
T ss_pred cCCcccc-CCCC---cCCCCEEEccCCcCCc-ccccc---CCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-
Confidence 5555443 2221 1345555555555553 33322 445555555555533 1111 1455555555555554
Q ss_pred CCccccCCCCcceeccccccccccCChhhhhcCCCCcEEEeccccCCCCCCcccccCCCCceeecccccccccccccccC
Q 045798 214 IPPSIYNLSFLVVFSVSHNQIHGSLPPSLGLLLPNLKFFQIHHNFFSGSIPISLSNASKLEHIEIANNNFSGKLSVNFGG 293 (1008)
Q Consensus 214 ~~~~~~~l~~L~~L~ls~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~ 293 (1008)
+| .|.++++|++|++++|+++ .+|.. .++|++|++++|.+++ +| .+.++++|++|++++|++++... .
T Consensus 146 lp-~~~~l~~L~~L~l~~N~l~-~lp~~----~~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~l~~-~--- 213 (454)
T 1jl5_A 146 LP-ELQNSSFLKIIDVDNNSLK-KLPDL----PPSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKKLPD-L--- 213 (454)
T ss_dssp CC-CCTTCTTCCEEECCSSCCS-CCCCC----CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSSCCC-C---
T ss_pred Cc-ccCCCCCCCEEECCCCcCc-ccCCC----cccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCcCCC-C---
Confidence 34 3555566666666666555 34432 2466666666666664 44 46666677777777776665321 1
Q ss_pred CCcccccccccccCCCCCCCcccccccccccCCCcEEEecCCcCCccCChhhhhhcccceeeeeccccccCCCCCccccc
Q 045798 294 MKNLSLLNLQFSNLGSGESDEMGFMNSLTNCSKLRVLSLGGNQFRGALPHSIANLSSQLQILILSSNQFYGSIPLGIGNL 373 (1008)
Q Consensus 294 l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l 373 (1008)
.++|+.|++++|+++.++ .+..+++|++|++++|++++ +|..+ .+|++|++++|++++ +|.. +
T Consensus 214 ~~~L~~L~l~~n~l~~lp--------~~~~l~~L~~L~l~~N~l~~-l~~~~----~~L~~L~l~~N~l~~-l~~~---~ 276 (454)
T 1jl5_A 214 PLSLESIVAGNNILEELP--------ELQNLPFLTTIYADNNLLKT-LPDLP----PSLEALNVRDNYLTD-LPEL---P 276 (454)
T ss_dssp CTTCCEEECCSSCCSSCC--------CCTTCTTCCEEECCSSCCSS-CCSCC----TTCCEEECCSSCCSC-CCCC---C
T ss_pred cCcccEEECcCCcCCccc--------ccCCCCCCCEEECCCCcCCc-ccccc----cccCEEECCCCcccc-cCcc---c
Confidence 135555566555554322 24456666666666666663 34321 246666666666663 4432 2
Q ss_pred cccceEEecCccccCCcchhccCCCCCceEEccCCcccccccccccCCCCcceeeccccccccccCCCCcCCCcccEeec
Q 045798 374 VDLYLLGMVENQFTGAIPKEMGKLQKLQGLDFSGNHFSGEIPSSLGNLSSLYEVFFNNNNLSGVIPFSLGNLKRLAFLEM 453 (1008)
Q Consensus 374 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L 453 (1008)
++|+.|++++|++++. |.. .++|+.|++++|++++ ++.. .++|++|++++|++++ +|.. +++|+.|++
T Consensus 277 ~~L~~L~ls~N~l~~l-~~~---~~~L~~L~l~~N~l~~-i~~~---~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L 344 (454)
T 1jl5_A 277 QSLTFLDVSENIFSGL-SEL---PPNLYYLNASSNEIRS-LCDL---PPSLEELNVSNNKLIE-LPAL---PPRLERLIA 344 (454)
T ss_dssp TTCCEEECCSSCCSEE-SCC---CTTCCEEECCSSCCSE-ECCC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEEC
T ss_pred CcCCEEECcCCccCcc-cCc---CCcCCEEECcCCcCCc-ccCC---cCcCCEEECCCCcccc-cccc---CCcCCEEEC
Confidence 5566666666666541 110 1456666666666653 2211 1356666666666664 3432 355666666
Q ss_pred ccccccCCcchhhhhhhhhhhhhcccCccccCCCcccccccccccccccccccccC--CCCcccccccccceeeccCccc
Q 045798 454 SGNELSGTIPEDIFNISYLSNSLNLARNHLVGIIPPRIGNLRALRSFDVSNNDLSG--EIPIELGHCSSLEEIYLAGNLF 531 (1008)
Q Consensus 454 s~N~l~~~lp~~~~~~~~~~~~L~L~~N~l~~~~p~~~~~l~~L~~Ldls~N~l~~--~~p~~~~~l~~L~~L~L~~N~l 531 (1008)
++|+++ .+|. .+++|++|++++|++++ .+|.+++. |+.|.+
T Consensus 345 ~~N~l~--------------------------~lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~--------L~~n~~ 387 (454)
T 1jl5_A 345 SFNHLA--------------------------EVPE---LPQNLKQLHVEYNPLREFPDIPESVED--------LRMNSH 387 (454)
T ss_dssp CSSCCS--------------------------CCCC---CCTTCCEEECCSSCCSSCCCCCTTCCE--------EECCC-
T ss_pred CCCccc--------------------------cccc---hhhhccEEECCCCCCCcCCCChHHHHh--------hhhccc
Confidence 666665 3444 35788888888888887 67766653 345777
Q ss_pred ccchhhhhhccccccEEecCCCcccc--cccCcccccccceeecccCcccccCCCC
Q 045798 532 HGSIPSFFNALKGVQKIDLSRNNLSG--QIPIFLEALSLEYLNLSFNDFEGKIPAK 585 (1008)
Q Consensus 532 ~~~~p~~~~~l~~L~~L~ls~N~l~~--~~p~~~~~~~L~~L~l~~N~l~g~~p~~ 585 (1008)
.|.+|.. +++|+.||+++|++++ .+|. +++.|.+.+|.+.+++|..
T Consensus 388 ~~~i~~~---~~~L~~L~ls~N~l~~~~~iP~-----sl~~L~~~~~~~~~~~~~~ 435 (454)
T 1jl5_A 388 LAEVPEL---PQNLKQLHVETNPLREFPDIPE-----SVEDLRMNSERVVDPYEFA 435 (454)
T ss_dssp --------------------------------------------------------
T ss_pred ccccccc---cCcCCEEECCCCcCCccccchh-----hHhheeCcCcccCCccccC
Confidence 7788874 5788899999999987 6664 4677888999999888754
No 50
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=2e-41 Score=373.34 Aligned_cols=267 Identities=25% Similarity=0.388 Sum_probs=214.7
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCceEE
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 762 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 762 (1008)
.++|.+.+.||+|+||+||+|.+..+++.||+|++........+.+.+|++++++++||||+++++++ .+++..+
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~~~~~ 83 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVL-----YKDKRLN 83 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-----EETTEEE
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEE-----ecCCeeE
Confidence 46789999999999999999999989999999998766667778899999999999999999999995 4566799
Q ss_pred EEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeEEcc
Q 045798 763 IVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGHIGD 842 (1008)
Q Consensus 763 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 842 (1008)
+||||+++|+|.+++..... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 84 lv~e~~~~~~L~~~l~~~~~---------~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~D 151 (310)
T 3s95_A 84 FITEYIKGGTLRGIIKSMDS---------QYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVAD 151 (310)
T ss_dssp EEEECCTTCBHHHHHHHCCT---------TSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECC
T ss_pred EEEEecCCCcHHHHHHhccC---------CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEee
Confidence 99999999999999976432 689999999999999999999998 999999999999999999999999
Q ss_pred cCcccccccccCccc----------cccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCcc
Q 045798 843 FGLARFHQEVSNSTL----------SSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLN 912 (1008)
Q Consensus 843 fg~a~~~~~~~~~~~----------~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~ 912 (1008)
||.++.......... .......||+.|+|||++.+..++.++|||||||++|||++|..||.........
T Consensus 152 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~ 231 (310)
T 3s95_A 152 FGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMD 231 (310)
T ss_dssp CTTCEECC--------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTT
T ss_pred cccceecccccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHH
Confidence 999986644332211 0112456999999999999999999999999999999999999998643221111
Q ss_pred HHHHHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHHHHHHH
Q 045798 913 LHNFARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHELQSVK 992 (1008)
Q Consensus 913 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~i~ 992 (1008)
.. .......+... ...++..+.+++.+||+.||++|||++|+++.|++++
T Consensus 232 ~~--------~~~~~~~~~~~----------------------~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~ 281 (310)
T 3s95_A 232 FG--------LNVRGFLDRYC----------------------PPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLR 281 (310)
T ss_dssp SS--------BCHHHHHHHTC----------------------CTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred Hh--------hhhhccccccC----------------------CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 00 00000010000 0123345789999999999999999999999999998
Q ss_pred HHHH
Q 045798 993 NILL 996 (1008)
Q Consensus 993 ~~~~ 996 (1008)
....
T Consensus 282 ~~~~ 285 (310)
T 3s95_A 282 MHLA 285 (310)
T ss_dssp HHHH
T ss_pred Hhcc
Confidence 7643
No 51
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=2.8e-41 Score=368.99 Aligned_cols=251 Identities=23% Similarity=0.287 Sum_probs=206.8
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCceEE
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 762 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 762 (1008)
.++|++.+.||+|+||+||+|.+..+++.||||++........+.+.+|+.++++++||||+++++++ ..++..+
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~~~~~ 93 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY-----LVGDELW 93 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEE-----EETTEEE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEE-----EECCEEE
Confidence 46899999999999999999999889999999999866666677899999999999999999999985 4566799
Q ss_pred EEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeEEcc
Q 045798 763 IVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGHIGD 842 (1008)
Q Consensus 763 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 842 (1008)
+||||+++|+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 94 lv~e~~~~~~L~~~~~~~-----------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~D 159 (297)
T 3fxz_A 94 VVMEYLAGGSLTDVVTET-----------CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTD 159 (297)
T ss_dssp EEEECCTTCBHHHHHHHS-----------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECC
T ss_pred EEEECCCCCCHHHHHhhc-----------CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEee
Confidence 999999999999999754 588999999999999999999998 999999999999999999999999
Q ss_pred cCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHHhhCC
Q 045798 843 FGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFARMALP 922 (1008)
Q Consensus 843 fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~~~~~ 922 (1008)
||++......... .....||+.|+|||++.+..++.++|||||||++|||++|+.||........ .........+
T Consensus 160 fg~~~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-~~~~~~~~~~ 234 (297)
T 3fxz_A 160 FGFCAQITPEQSK----RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA-LYLIATNGTP 234 (297)
T ss_dssp CTTCEECCSTTCC----BCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH-HHHHHHHCSC
T ss_pred CCCceecCCcccc----cCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHhCCCC
Confidence 9999865443222 2235699999999999999999999999999999999999999864311100 0000000000
Q ss_pred cchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 923 NQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 923 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
........+..+.+++.+||+.||++|||++|+++
T Consensus 235 -----------------------------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 235 -----------------------------ELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp -----------------------------CCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred -----------------------------CCCCccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 00001123456789999999999999999999986
No 52
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=5e-41 Score=368.67 Aligned_cols=268 Identities=25% Similarity=0.372 Sum_probs=207.5
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhh--cCCCCceeeeeccccccccCCce
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKN--IRHRNLVKVITSCSSIDFQGNDF 760 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~~~~~~~~~~~~~~~~ 760 (1008)
.++|++.+.||+|+||+||+|.+ +++.||||++... ....+.+|.+++.. ++||||+++++++... ......
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~-~~~~~~ 80 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW--QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTS-RHSSTQ 80 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE--TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEE-ETTEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE--CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccc-cCCCce
Confidence 56899999999999999999998 6899999998643 34556667777766 7999999999986542 234566
Q ss_pred EEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHh--------hCCCCCceeccCCCCCeee
Q 045798 761 KAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLH--------HHCQEPILHCDLKPSNILL 832 (1008)
Q Consensus 761 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH--------~~~~~~ivH~Dlkp~NIll 832 (1008)
.++||||+++|+|.++++.. .+++..++.++.||+.||+||| +. +|+||||||+||++
T Consensus 81 ~~lv~e~~~~g~L~~~l~~~-----------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill 146 (301)
T 3q4u_A 81 LWLITHYHEMGSLYDYLQLT-----------TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILV 146 (301)
T ss_dssp EEEEECCCTTCBHHHHHTTC-----------CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEE
T ss_pred eEEehhhccCCCHHHHHhhc-----------ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEE
Confidence 89999999999999999643 6899999999999999999999 65 99999999999999
Q ss_pred cCCCCeEEcccCcccccccccCccccccccccccccccCccccCCC------CCCcccchhhHHHHHHHHHhC-------
Q 045798 833 DNDLSGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGS------EVSTNGDVYSYGILLLEMVTA------- 899 (1008)
Q Consensus 833 ~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~sDvwslG~vl~elltG------- 899 (1008)
+.++.+||+|||+|+.................||+.|+|||++.+. .+++++|||||||++|||++|
T Consensus 147 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~ 226 (301)
T 3q4u_A 147 KKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIV 226 (301)
T ss_dssp CTTSCEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBC
T ss_pred cCCCCEEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCcccc
Confidence 9999999999999986655443332223345699999999998876 556799999999999999999
Q ss_pred ---CCCCCccccCCccHHHHHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCC
Q 045798 900 ---KKPTDVMFEGDLNLHNFARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQ 976 (1008)
Q Consensus 900 ---~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~ 976 (1008)
+.||...................... .+. .+.......++.++.+++.+||+.||+
T Consensus 227 ~~~~~pf~~~~~~~~~~~~~~~~~~~~~~----~~~-----------------~~~~~~~~~~~~~l~~li~~cl~~dP~ 285 (301)
T 3q4u_A 227 EDYKPPFYDVVPNDPSFEDMRKVVCVDQQ----RPN-----------------IPNRWFSDPTLTSLAKLMKECWYQNPS 285 (301)
T ss_dssp CCCCCTTTTTSCSSCCHHHHHHHHTTSCC----CCC-----------------CCGGGGGSHHHHHHHHHHHHHCCSSGG
T ss_pred ccccccccccCCCCcchhhhhHHHhccCC----CCC-----------------CChhhccCccHHHHHHHHHHHhhcChh
Confidence 77775443333332222221111000 000 000001234677899999999999999
Q ss_pred CCCCHHHHHHHHHHH
Q 045798 977 DRMNMTNVVHELQSV 991 (1008)
Q Consensus 977 ~RPt~~evl~~L~~i 991 (1008)
+|||++||++.|+++
T Consensus 286 ~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 286 ARLTALRIKKTLTKI 300 (301)
T ss_dssp GSCCHHHHHHHHHHH
T ss_pred hCCCHHHHHHHHhcc
Confidence 999999999999886
No 53
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=2.1e-41 Score=376.15 Aligned_cols=288 Identities=34% Similarity=0.591 Sum_probs=227.2
Q ss_pred cCCCCCHHHHHHHhcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccc-hhhHHHHHHHHHHhhcCCCCceeeee
Q 045798 670 ALPKMSYKSLLKATNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCE-GASKSFMAECKALKNIRHRNLVKVIT 748 (1008)
Q Consensus 670 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~ 748 (1008)
....+++.++..+.++|++.+.||+|+||.||+|... +++.||||+++.... .....+.+|++++++++||||+++++
T Consensus 16 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~ 94 (326)
T 3uim_A 16 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLA-DGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRG 94 (326)
T ss_dssp CCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCS-SSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCE
T ss_pred ccceecHHHHHHHhhccccceeEecCCCcEEEEEEec-CCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEE
Confidence 3557889999999999999999999999999999864 789999999975432 23347999999999999999999999
Q ss_pred ccccccccCCceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCC
Q 045798 749 SCSSIDFQGNDFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPS 828 (1008)
Q Consensus 749 ~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~ 828 (1008)
+| ..++..++||||+++|+|.+++....... ..+++..+..++.|++.||+|||+.+.++|+||||||+
T Consensus 95 ~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~ 163 (326)
T 3uim_A 95 FC-----MTPTERLLVYPYMANGSVASCLRERPESQ------PPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAA 163 (326)
T ss_dssp EE-----CCSSCCEEEEECCTTCBHHHHHHCCSTTC------CCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGG
T ss_pred EE-----ecCCceEEEEEeccCCCHHHHHHhccccC------CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchh
Confidence 95 45566899999999999999998654321 15899999999999999999999975569999999999
Q ss_pred CeeecCCCCeEEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccc-
Q 045798 829 NILLDNDLSGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMF- 907 (1008)
Q Consensus 829 NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~- 907 (1008)
||+++.++.+||+|||+++......... .....||+.|+|||++.+..++.++|||||||++|||++|+.||+...
T Consensus 164 Nil~~~~~~~kl~Dfg~~~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~ 240 (326)
T 3uim_A 164 NILLDEEFEAVVGDFGLAKLMDYKDTHV---TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARL 240 (326)
T ss_dssp GEEECTTCCEEECCCSSCEECCSSSSCE---ECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHH
T ss_pred hEEECCCCCEEeccCccccccCcccccc---cccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCccccccc
Confidence 9999999999999999998664433222 223458999999999988889999999999999999999999996321
Q ss_pred --cCCccHHHHHHhhCCcc-hhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHH
Q 045798 908 --EGDLNLHNFARMALPNQ-VMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNV 984 (1008)
Q Consensus 908 --~~~~~~~~~~~~~~~~~-~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ev 984 (1008)
..+.....+........ .....+..+.. ....+.+..+.+++.+||+.||.+|||+.||
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~l~~li~~cl~~dP~~Rps~~el 302 (326)
T 3uim_A 241 ANDDDVMLLDWVKGLLKEKKLEALVDVDLQG------------------NYKDEEVEQLIQVALLCTQSSPMERPKMSEV 302 (326)
T ss_dssp TTTSCSBHHHHHTTTTSSCCSTTSSCTTCTT------------------SCCHHHHHHHHHHHHHHTCSCGGGSCCHHHH
T ss_pred ccccchhHHHHHHHHhhchhhhhhcChhhcc------------------ccCHHHHHHHHHHHHHHhCcCCccCCCHHHH
Confidence 12222333332222211 12222211111 1124567889999999999999999999999
Q ss_pred HHHHHH
Q 045798 985 VHELQS 990 (1008)
Q Consensus 985 l~~L~~ 990 (1008)
++.|++
T Consensus 303 l~~L~~ 308 (326)
T 3uim_A 303 VRMLEG 308 (326)
T ss_dssp HHHHHT
T ss_pred HHHhcC
Confidence 999975
No 54
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=7.1e-41 Score=370.52 Aligned_cols=285 Identities=22% Similarity=0.307 Sum_probs=211.3
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCceEE
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 762 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 762 (1008)
.++|++.+.||+|+||+||+|++ .++.||||+++.. ......+.+|+.++++++||||+++++++.... ......+
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~-~~~~~~~ 98 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQL--LNEYVAVKIFPIQ-DKQSWQNEYEVYSLPGMKHENILQFIGAEKRGT-SVDVDLW 98 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEE--TTEEEEEEEECGG-GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEEC-SSSEEEE
T ss_pred hhhchhhheecccCceEEEEEEE--CCCEEEEEEeecC-chHHHHHHHHHHHHhcCCCCCchhhcceeccCC-CCCceEE
Confidence 56899999999999999999998 4899999999754 333456677999999999999999999976422 1234579
Q ss_pred EEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhC-------CCCCceeccCCCCCeeecCC
Q 045798 763 IVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHH-------CQEPILHCDLKPSNILLDND 835 (1008)
Q Consensus 763 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-------~~~~ivH~Dlkp~NIll~~~ 835 (1008)
+||||+++|+|.++++.. .+++..++.++.|++.||+|||+. ..++|+||||||+||+++.+
T Consensus 99 lv~e~~~~g~L~~~l~~~-----------~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~ 167 (322)
T 3soc_A 99 LITAFHEKGSLSDFLKAN-----------VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNN 167 (322)
T ss_dssp EEEECCTTCBHHHHHHHC-----------CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTT
T ss_pred EEEecCCCCCHHHHHHhc-----------CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCC
Confidence 999999999999999653 689999999999999999999984 12389999999999999999
Q ss_pred CCeEEcccCcccccccccCccccccccccccccccCccccCCC-----CCCcccchhhHHHHHHHHHhCCCCCCccccCC
Q 045798 836 LSGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGS-----EVSTNGDVYSYGILLLEMVTAKKPTDVMFEGD 910 (1008)
Q Consensus 836 ~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~sDvwslG~vl~elltG~~pf~~~~~~~ 910 (1008)
+.+||+|||+++......... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||.......
T Consensus 168 ~~~kL~DFg~a~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~ 245 (322)
T 3soc_A 168 LTACIADFGLALKFEAGKSAG--DTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEY 245 (322)
T ss_dssp CCEEECCCTTCEEECTTSCCC--CCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCC
T ss_pred CeEEEccCCcccccccccCcc--ccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchh
Confidence 999999999998665433221 12335699999999998863 56678999999999999999999997543321
Q ss_pred ccHHHHHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHHHHH
Q 045798 911 LNLHNFARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHELQS 990 (1008)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 990 (1008)
........ .......++.+....... ............++.++.+++.+||+.||++|||+.||++.|++
T Consensus 246 ~~~~~~~~-~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 315 (322)
T 3soc_A 246 MLPFEEEI-GQHPSLEDMQEVVVHKKK---------RPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQ 315 (322)
T ss_dssp CCTTHHHH-CSSCCHHHHHHHHTTSCC---------CCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred ccchhhhh-ccCCchhhhhhhhhcccC---------CCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 11100000 000111111110000000 00000001122466779999999999999999999999999999
Q ss_pred HHHH
Q 045798 991 VKNI 994 (1008)
Q Consensus 991 i~~~ 994 (1008)
+++.
T Consensus 316 l~~~ 319 (322)
T 3soc_A 316 MQRL 319 (322)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8764
No 55
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=7.1e-40 Score=360.51 Aligned_cols=284 Identities=30% Similarity=0.479 Sum_probs=224.4
Q ss_pred cCCCCCHHHHHHHhcCCCCC------ceEeeccCeeEEEEEEcCCCeEEEEEEeccc----cchhhHHHHHHHHHHhhcC
Q 045798 670 ALPKMSYKSLLKATNGFSST------HLIGVGSFGCVYKGALDEDGIVVAIKVINLQ----CEGASKSFMAECKALKNIR 739 (1008)
Q Consensus 670 ~~~~~~~~~~~~~~~~y~~~------~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~ 739 (1008)
....+++.++..++++|... +.||+|+||.||+|.. +++.||||++... .....+.+.+|++++++++
T Consensus 11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 88 (307)
T 2nru_A 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQ 88 (307)
T ss_dssp CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCC
T ss_pred CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcC
Confidence 45678999999999998877 8999999999999987 6889999998643 2344578999999999999
Q ss_pred CCCceeeeeccccccccCCceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCC
Q 045798 740 HRNLVKVITSCSSIDFQGNDFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEP 819 (1008)
Q Consensus 740 h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ 819 (1008)
||||+++++++ ..++..++||||+++++|.+++...... ..+++..++.++.|++.||+|||+. +
T Consensus 89 h~~i~~~~~~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~-------~~~~~~~~~~i~~~i~~~l~~lH~~---~ 153 (307)
T 2nru_A 89 HENLVELLGFS-----SDGDDLCLVYVYMPNGSLLDRLSCLDGT-------PPLSWHMRCKIAQGAANGINFLHEN---H 153 (307)
T ss_dssp CTTBCCEEEEE-----CSSSSCEEEEECCTTCBHHHHHHTGGGC-------CCCCHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred CCCeEEEEEEE-----ecCCceEEEEEecCCCcHHHHHHhccCC-------CCCCHHHHHHHHHHHHHHHHHHhcC---C
Confidence 99999999995 4556789999999999999998643211 1689999999999999999999998 9
Q ss_pred ceeccCCCCCeeecCCCCeEEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhC
Q 045798 820 ILHCDLKPSNILLDNDLSGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTA 899 (1008)
Q Consensus 820 ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG 899 (1008)
|+||||||+||+++.++.+||+|||.+.......... ......||+.|+|||.+.+ .++.++||||||+++|+|++|
T Consensus 154 i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g 230 (307)
T 2nru_A 154 HIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV--MTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITG 230 (307)
T ss_dssp EECSCCCGGGEEECTTCCEEECCCTTCEECCSCSSCE--ECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHC
T ss_pred eecCCCCHHHEEEcCCCcEEEeecccccccccccccc--cccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHC
Confidence 9999999999999999999999999998654432221 1223468999999998765 588999999999999999999
Q ss_pred CCCCCccccCCccHHHHHHh--hCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCC
Q 045798 900 KKPTDVMFEGDLNLHNFARM--ALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQD 977 (1008)
Q Consensus 900 ~~pf~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~ 977 (1008)
..||......... ..+... .......+.+++.+.. .....+..+.+++.+||+.||.+
T Consensus 231 ~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~l~~li~~cl~~~p~~ 290 (307)
T 2nru_A 231 LPAVDEHREPQLL-LDIKEEIEDEEKTIEDYIDKKMND-------------------ADSTSVEAMYSVASQCLHEKKNK 290 (307)
T ss_dssp CCSBCTTBSSSBT-THHHHHHHTTSCCHHHHSCSSCSC-------------------CCHHHHHHHHHHHHHHTCSSTTT
T ss_pred CCCcccCcchHHH-HHHHHHhhhhhhhhhhhccccccc-------------------cchHHHHHHHHHHHHHcCCCccc
Confidence 9999754332211 111111 1112233333332221 12346778999999999999999
Q ss_pred CCCHHHHHHHHHHHHH
Q 045798 978 RMNMTNVVHELQSVKN 993 (1008)
Q Consensus 978 RPt~~evl~~L~~i~~ 993 (1008)
|||++||++.|+++..
T Consensus 291 Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 291 RPDIKKVQQLLQEMTA 306 (307)
T ss_dssp SCCHHHHHHHHHHHC-
T ss_pred CcCHHHHHHHHHHHhc
Confidence 9999999999998754
No 56
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=3.1e-40 Score=364.80 Aligned_cols=263 Identities=23% Similarity=0.272 Sum_probs=213.0
Q ss_pred CCCCHHHHHHHhcC----------CCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhhcCCC
Q 045798 672 PKMSYKSLLKATNG----------FSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKNIRHR 741 (1008)
Q Consensus 672 ~~~~~~~~~~~~~~----------y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 741 (1008)
+.++++++..+++. |...+.||+|+||.||+|++..+|+.||||++........+.+.+|+.++++++||
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence 56788888888764 67778999999999999999889999999999876666677899999999999999
Q ss_pred CceeeeeccccccccCCceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCce
Q 045798 742 NLVKVITSCSSIDFQGNDFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPIL 821 (1008)
Q Consensus 742 niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iv 821 (1008)
||+++++++ ..++..++||||+++++|.+++... .+++..+..++.|++.||+|||+. +|+
T Consensus 103 niv~~~~~~-----~~~~~~~lv~e~~~~~~L~~~l~~~-----------~l~~~~~~~i~~qi~~~L~~LH~~---~iv 163 (321)
T 2c30_A 103 NVVEMYKSY-----LVGEELWVLMEFLQGGALTDIVSQV-----------RLNEEQIATVCEAVLQALAYLHAQ---GVI 163 (321)
T ss_dssp TBCCEEEEE-----EETTEEEEEECCCCSCBHHHHHTTC-----------CCCHHHHHHHHHHHHHHHHHHHHT---TEE
T ss_pred CcceEEEEE-----EECCEEEEEEecCCCCCHHHHHHhc-----------CCCHHHHHHHHHHHHHHHHHHHHC---Cee
Confidence 999999995 4456799999999999999998643 689999999999999999999998 999
Q ss_pred eccCCCCCeeecCCCCeEEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCC
Q 045798 822 HCDLKPSNILLDNDLSGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKK 901 (1008)
Q Consensus 822 H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~ 901 (1008)
||||||+||+++.++.+||+|||++......... .....||+.|+|||++.+..++.++|||||||++|||++|+.
T Consensus 164 H~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~ 239 (321)
T 2c30_A 164 HRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPK----RKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEP 239 (321)
T ss_dssp CCCCSGGGEEECTTCCEEECCCTTCEECCSSSCC----BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSC
T ss_pred cCCCCHHHEEECCCCcEEEeeeeeeeecccCccc----cccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999865443221 223469999999999999999999999999999999999999
Q ss_pred CCCccccCCccHHHHHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCH
Q 045798 902 PTDVMFEGDLNLHNFARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNM 981 (1008)
Q Consensus 902 pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~ 981 (1008)
||...... .......... .+.+ ......+..+.+++.+||+.||++|||+
T Consensus 240 pf~~~~~~--~~~~~~~~~~--------~~~~--------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~ 289 (321)
T 2c30_A 240 PYFSDSPV--QAMKRLRDSP--------PPKL--------------------KNSHKVSPVLRDFLERMLVRDPQERATA 289 (321)
T ss_dssp TTTTSCHH--HHHHHHHHSS--------CCCC--------------------TTGGGSCHHHHHHHHHHSCSSTTTSCCH
T ss_pred CCCCCCHH--HHHHHHhcCC--------CCCc--------------------CccccCCHHHHHHHHHHccCChhhCcCH
Confidence 98642110 0000000000 0000 0011234567899999999999999999
Q ss_pred HHHHHH
Q 045798 982 TNVVHE 987 (1008)
Q Consensus 982 ~evl~~ 987 (1008)
+|+++.
T Consensus 290 ~ell~h 295 (321)
T 2c30_A 290 QELLDH 295 (321)
T ss_dssp HHHHTS
T ss_pred HHHhcC
Confidence 999873
No 57
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=7.2e-41 Score=369.93 Aligned_cols=248 Identities=24% Similarity=0.347 Sum_probs=203.1
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccc--cchhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCce
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQ--CEGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDF 760 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 760 (1008)
.++|++.+.||+|+||.||+|++..+|+.||||++... .....+.+.+|+++++.++||||+++++++ ...+.
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~-----~~~~~ 88 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVI-----ETEKT 88 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----ECSSE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEE-----EECCE
Confidence 56899999999999999999999889999999999754 234456789999999999999999999994 55677
Q ss_pred EEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeEE
Q 045798 761 KAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGHI 840 (1008)
Q Consensus 761 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 840 (1008)
.++||||+++|+|.+++...+ ++++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||
T Consensus 89 ~~lv~e~~~~~~L~~~l~~~~----------~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl 155 (328)
T 3fe3_A 89 LYLIMEYASGGEVFDYLVAHG----------RMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKI 155 (328)
T ss_dssp EEEEECCCTTCBHHHHHHHHC----------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEE
T ss_pred EEEEEECCCCCcHHHHHHHcC----------CCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEE
Confidence 999999999999999997653 689999999999999999999998 9999999999999999999999
Q ss_pred cccCcccccccccCccccccccccccccccCccccCCCCCC-cccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHHh
Q 045798 841 GDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVS-TNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFARM 919 (1008)
Q Consensus 841 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~~ 919 (1008)
+|||++........ .....||+.|+|||++.+..++ +++||||+||++|||++|+.||..... .....
T Consensus 156 ~DFG~a~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-----~~~~~- 224 (328)
T 3fe3_A 156 ADFGFSNEFTVGGK-----LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL-----KELRE- 224 (328)
T ss_dssp CSTTCCGGGSSSCG-----GGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHH-
T ss_pred eeccCceecCCCCc-----cccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCH-----HHHHH-
Confidence 99999986543321 2235699999999999888765 799999999999999999999864311 01100
Q ss_pred hCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 920 ALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 920 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
...... ...+ ...+.++.+++.+||+.||.+|||++|+++
T Consensus 225 -----------~i~~~~----------~~~p------~~~s~~~~~li~~~L~~dP~~R~t~~eil~ 264 (328)
T 3fe3_A 225 -----------RVLRGK----------YRIP------FYMSTDCENLLKRFLVLNPIKRGTLEQIMK 264 (328)
T ss_dssp -----------HHHHCC----------CCCC------TTSCHHHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred -----------HHHhCC----------CCCC------CCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 000000 0000 013445789999999999999999999975
No 58
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=1.3e-40 Score=365.42 Aligned_cols=261 Identities=28% Similarity=0.405 Sum_probs=200.6
Q ss_pred HhcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEecccc--chhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCc
Q 045798 682 ATNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQC--EGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGND 759 (1008)
Q Consensus 682 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 759 (1008)
..++|++.+.||+|+||+||+|++ +++.||||++.... ....+.+.+|++++++++||||+++++++ ...+
T Consensus 35 ~~~~y~i~~~lG~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~~ 107 (309)
T 3p86_A 35 PWCDLNIKEKIGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV-----TQPP 107 (309)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----CSTT
T ss_pred ChhHceeeeEeecCCCeEEEEEEE--CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEE-----EECC
Confidence 356899999999999999999988 68899999997543 33446799999999999999999999995 4556
Q ss_pred eEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCC--ceeccCCCCCeeecCCCC
Q 045798 760 FKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEP--ILHCDLKPSNILLDNDLS 837 (1008)
Q Consensus 760 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~--ivH~Dlkp~NIll~~~~~ 837 (1008)
..++||||+++|+|.+++..... ...+++..++.++.|++.||+|||+. + |+||||||+||+++.++.
T Consensus 108 ~~~lv~e~~~~~~L~~~l~~~~~-------~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~ 177 (309)
T 3p86_A 108 NLSIVTEYLSRGSLYRLLHKSGA-------REQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYT 177 (309)
T ss_dssp CCEEEEECCTTCBHHHHHHSTTH-------HHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCC
T ss_pred ceEEEEecCCCCcHHHHHhhcCC-------CCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCc
Confidence 68999999999999999976531 11489999999999999999999997 7 999999999999999999
Q ss_pred eEEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHH
Q 045798 838 GHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFA 917 (1008)
Q Consensus 838 ~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~ 917 (1008)
+||+|||+++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+ .....
T Consensus 178 ~kL~Dfg~a~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~--~~~~~ 251 (309)
T 3p86_A 178 VKVCDFGLSRLKASTFL----SSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQ--VVAAV 251 (309)
T ss_dssp EEECCCC---------------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHH--HHHHH
T ss_pred EEECCCCCCcccccccc----ccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHH
Confidence 99999999975443221 1223458999999999999999999999999999999999999986431110 00000
Q ss_pred HhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHHHHHHHHH
Q 045798 918 RMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHELQSVKNI 994 (1008)
Q Consensus 918 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~i~~~ 994 (1008)
..... .. . .....+.++.+++.+||+.||++|||++|+++.|+.+.+.
T Consensus 252 ~~~~~---------~~--------------~------~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~ 299 (309)
T 3p86_A 252 GFKCK---------RL--------------E------IPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKS 299 (309)
T ss_dssp HHSCC---------CC--------------C------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-
T ss_pred HhcCC---------CC--------------C------CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 00000 00 0 0012345689999999999999999999999999988654
No 59
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=4.9e-41 Score=367.45 Aligned_cols=280 Identities=24% Similarity=0.373 Sum_probs=210.5
Q ss_pred hcCCCCCceEeeccCeeEEEEE----EcCCCeEEEEEEeccccchhhHHHHHHHHHHhhcCCCCceeeeeccccccccCC
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGA----LDEDGIVVAIKVINLQCEGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGN 758 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~----~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 758 (1008)
.++|++.+.||+|+||+||+|+ ...+++.||||+++.......+.+.+|++++++++||||++++++|.. .+.
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---~~~ 85 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYS---AGR 85 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECH---HHH
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec---CCC
Confidence 4679999999999999999998 456889999999987666667889999999999999999999998643 233
Q ss_pred ceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCe
Q 045798 759 DFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSG 838 (1008)
Q Consensus 759 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 838 (1008)
...++||||+++|+|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 86 ~~~~lv~e~~~~~~L~~~l~~~~~---------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~ 153 (295)
T 3ugc_A 86 RNLKLIMEYLPYGSLRDYLQKHKE---------RIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRV 153 (295)
T ss_dssp TSCEEEEECCTTCBHHHHHHHCGG---------GCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEE
T ss_pred CceEEEEEeCCCCCHHHHHHhccc---------ccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeE
Confidence 457999999999999999976531 589999999999999999999998 99999999999999999999
Q ss_pred EEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHH
Q 045798 839 HIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFAR 918 (1008)
Q Consensus 839 kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~ 918 (1008)
||+|||+++......... .......++..|+|||++.+..++.++||||||+++|||++|..||...... +..
T Consensus 154 kl~Dfg~~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~------~~~ 226 (295)
T 3ugc_A 154 KIGDFGLTKVLPQDKEFF-KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE------FMR 226 (295)
T ss_dssp EECCCCSCC--------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHH------HHH
T ss_pred EEccCcccccccCCccee-eeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHH------HHh
Confidence 999999998765433221 1122344778899999999889999999999999999999999998643211 111
Q ss_pred hhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHHHHHHHHH
Q 045798 919 MALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHELQSVKNI 994 (1008)
Q Consensus 919 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~i~~~ 994 (1008)
............. ..........+. +....++.++.+++.+||+.||++|||++|+++.|+++.+.
T Consensus 227 ~~~~~~~~~~~~~------~~~~~~~~~~~~----~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~ 292 (295)
T 3ugc_A 227 MIGNDKQGQMIVF------HLIELLKNNGRL----PRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 292 (295)
T ss_dssp HHCTTCCTHHHHH------HHHHHHHTTCCC----CCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred hhcCccccchhHH------HHHHHHhccCcC----CCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence 1000000000000 000000000000 11123566789999999999999999999999999998764
No 60
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=5.1e-41 Score=371.80 Aligned_cols=266 Identities=26% Similarity=0.434 Sum_probs=208.5
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCC---eEEEEEEeccc-cchhhHHHHHHHHHHhhcCCCCceeeeeccccccccCC
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDG---IVVAIKVINLQ-CEGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGN 758 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~---~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 758 (1008)
.++|++.+.||+|+||.||+|.+..++ ..||||+++.. .....+.+.+|++++++++||||+++++++ ..+
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~ 122 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVV-----TRG 122 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-----CGG
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEE-----EeC
Confidence 357889999999999999999997444 46999999754 334457899999999999999999999995 455
Q ss_pred ceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCe
Q 045798 759 DFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSG 838 (1008)
Q Consensus 759 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 838 (1008)
+..++||||+++|+|.+++..... .+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 123 ~~~~lv~e~~~~~~L~~~l~~~~~---------~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~ 190 (325)
T 3kul_A 123 RLAMIVTEYMENGSLDTFLRTHDG---------QFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVC 190 (325)
T ss_dssp GCCEEEEECCTTCBHHHHHHTTTT---------CSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCE
T ss_pred CccEEEeeCCCCCcHHHHHHhccc---------CCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCE
Confidence 668999999999999999965431 689999999999999999999998 99999999999999999999
Q ss_pred EEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHh-CCCCCCccccCCccHHHHH
Q 045798 839 HIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVT-AKKPTDVMFEGDLNLHNFA 917 (1008)
Q Consensus 839 kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-G~~pf~~~~~~~~~~~~~~ 917 (1008)
||+|||+++.......... ......+|+.|+|||++.+..++.++|||||||++|||++ |..||......+ .....
T Consensus 191 kl~Dfg~a~~~~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~--~~~~~ 267 (325)
T 3kul_A 191 KVSDFGLSRVLEDDPDAAY-TTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRD--VISSV 267 (325)
T ss_dssp EECCCSSCEECC----CCE-ECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHH--HHHHH
T ss_pred EECCCCcccccccCcccee-eccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHH--HHHHH
Confidence 9999999987654432221 1223346788999999988899999999999999999999 999986431110 00000
Q ss_pred HhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHHHHHHHHHHHH
Q 045798 918 RMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHELQSVKNILLE 997 (1008)
Q Consensus 918 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~i~~~~~~ 997 (1008)
. ... ..+ ....++..+.+++.+||+.||++|||+.||++.|+.+......
T Consensus 268 ~------------~~~--------------~~~----~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~~ 317 (325)
T 3kul_A 268 E------------EGY--------------RLP----APMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPES 317 (325)
T ss_dssp H------------TTC--------------CCC----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC-
T ss_pred H------------cCC--------------CCC----CCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCccc
Confidence 0 000 000 0112455689999999999999999999999999998766444
Q ss_pred H
Q 045798 998 L 998 (1008)
Q Consensus 998 ~ 998 (1008)
.
T Consensus 318 ~ 318 (325)
T 3kul_A 318 L 318 (325)
T ss_dssp -
T ss_pred c
Confidence 3
No 61
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=9.8e-41 Score=370.67 Aligned_cols=252 Identities=24% Similarity=0.315 Sum_probs=196.6
Q ss_pred HhcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEecccc-chhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCce
Q 045798 682 ATNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQC-EGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDF 760 (1008)
Q Consensus 682 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 760 (1008)
..++|++.+.||+|+||+||+|++..+|+.||||++.... ....+.+.+|++++++++||||+++++++ ...+.
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~-----~~~~~ 82 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVL-----ETANK 82 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEE-----ECSSE
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEE-----EeCCE
Confidence 3678999999999999999999999899999999997543 23456789999999999999999999994 55677
Q ss_pred EEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeEE
Q 045798 761 KAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGHI 840 (1008)
Q Consensus 761 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 840 (1008)
.++||||+++|+|.+++.... ++++..++.++.||+.||+|||+. +|+||||||+||++++++.+||
T Consensus 83 ~~lv~E~~~gg~L~~~l~~~~----------~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL 149 (347)
T 3zgw_A 83 IFMVLEYCPGGELFDYIISQD----------RLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKL 149 (347)
T ss_dssp EEEEEECCTTCBHHHHHHHHS----------SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEE
T ss_pred EEEEEeCCCCCCHHHHHHHcC----------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEE
Confidence 999999999999999996543 689999999999999999999998 9999999999999999999999
Q ss_pred cccCcccccccccCccccccccccccccccCccccCCCCC-CcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHHh
Q 045798 841 GDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEV-STNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFARM 919 (1008)
Q Consensus 841 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~~ 919 (1008)
+|||++......... ......||+.|+|||++.+..+ +.++||||+||++|+|++|..||....... ........
T Consensus 150 ~DFG~a~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~-~~~~i~~~ 225 (347)
T 3zgw_A 150 IDFGLCAKPKGNKDY---HLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMA-LYKKIMRG 225 (347)
T ss_dssp CCCTTCBC-----------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHT
T ss_pred EeccCcccccCCCCc---cccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHcC
Confidence 999999765433221 1223468999999999988775 889999999999999999999986421100 00000000
Q ss_pred hCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHH
Q 045798 920 ALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHE 987 (1008)
Q Consensus 920 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 987 (1008)
. . ..+ ...+.++.+++.+||+.||++|||++|+++.
T Consensus 226 ~------------~--------------~~p------~~~s~~~~~li~~~L~~dP~~Rps~~eil~h 261 (347)
T 3zgw_A 226 K------------Y--------------DVP------KWLSPSSILLLQQMLQVDPKKRISMKNLLNH 261 (347)
T ss_dssp C------------C--------------CCC------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred C------------C--------------CCC------CCCCHHHHHHHHHHcccCHhHCcCHHHHhcC
Confidence 0 0 000 0123456889999999999999999999863
No 62
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=3.2e-40 Score=364.89 Aligned_cols=254 Identities=22% Similarity=0.300 Sum_probs=203.1
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccc-hhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCceE
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCE-GASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDFK 761 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 761 (1008)
.++|++.+.||+|+||.||+|++..+++.||||++..... ...+.+.+|+.+++.++||||+++++++ ..++..
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~-----~~~~~~ 80 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR-----REGNIQ 80 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEE-----ECSSEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEE-----ecCCeE
Confidence 4689999999999999999999998999999999964432 3346789999999999999999999994 556778
Q ss_pred EEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeEEc
Q 045798 762 AIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGHIG 841 (1008)
Q Consensus 762 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 841 (1008)
++||||+++|+|.+++.... .+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~----------~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~ 147 (323)
T 3tki_A 81 YLFLEYCSGGELFDRIEPDI----------GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKIS 147 (323)
T ss_dssp EEEEECCTTEEGGGGSBTTT----------BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEEC
T ss_pred EEEEEcCCCCcHHHHHhhcC----------CCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEE
Confidence 99999999999999997654 689999999999999999999998 99999999999999999999999
Q ss_pred ccCcccccccccCccccccccccccccccCccccCCCCC-CcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHHhh
Q 045798 842 DFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEV-STNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFARMA 920 (1008)
Q Consensus 842 Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~~~ 920 (1008)
|||+++......... ......||+.|+|||++.+..+ +.++|||||||++|+|++|+.||............+....
T Consensus 148 Dfg~a~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~ 225 (323)
T 3tki_A 148 DFGLATVFRYNNRER--LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 225 (323)
T ss_dssp CCTTCEECEETTEEC--CBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTC
T ss_pred EeeccceeccCCccc--ccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhccc
Confidence 999998654332211 1223569999999999887765 7799999999999999999999975433222222211110
Q ss_pred CCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 921 LPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 921 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
... ......+..+.+++.+||+.||.+|||++|+++
T Consensus 226 ~~~------------------------------~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~ 261 (323)
T 3tki_A 226 TYL------------------------------NPWKKIDSAPLALLHKILVENPSARITIPDIKK 261 (323)
T ss_dssp TTS------------------------------TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ccC------------------------------CccccCCHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 000 001123455789999999999999999999976
No 63
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=6.4e-40 Score=366.55 Aligned_cols=252 Identities=20% Similarity=0.259 Sum_probs=204.5
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccch------hhHHHHHHHHHHhhcCCCCceeeeecccccccc
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEG------ASKSFMAECKALKNIRHRNLVKVITSCSSIDFQ 756 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 756 (1008)
.++|++.+.||+|+||.||+|++..+|+.||+|+++..... ..+.+.+|+.++++++||||+++++++ .
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~-----~ 85 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVY-----E 85 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEE-----E
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEE-----E
Confidence 56799999999999999999999989999999999754321 346799999999999999999999994 5
Q ss_pred CCceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCC
Q 045798 757 GNDFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDL 836 (1008)
Q Consensus 757 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 836 (1008)
++...++||||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++
T Consensus 86 ~~~~~~lv~e~~~gg~L~~~l~~~~----------~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~ 152 (361)
T 2yab_A 86 NRTDVVLILELVSGGELFDFLAQKE----------SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKN 152 (361)
T ss_dssp CSSEEEEEEECCCSCBHHHHHTTCS----------CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTT
T ss_pred eCCEEEEEEEcCCCCcHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCC
Confidence 6678999999999999999997653 689999999999999999999998 999999999999998776
Q ss_pred ----CeEEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCcc
Q 045798 837 ----SGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLN 912 (1008)
Q Consensus 837 ----~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~ 912 (1008)
.+||+|||++........ .....||+.|+|||++.+..++.++||||+||++|+|++|..||......+ .
T Consensus 153 ~~~~~vkl~DFG~a~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~-~ 226 (361)
T 2yab_A 153 IPIPHIKLIDFGLAHEIEDGVE-----FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE-T 226 (361)
T ss_dssp SSSCCEEECCCSSCEECCTTCC-----CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH-H
T ss_pred CCccCEEEEecCCceEcCCCCc-----cccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHH-H
Confidence 799999999986654321 223469999999999999899999999999999999999999986421110 0
Q ss_pred HHHHHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 913 LHNFARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 913 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
...... ....... ......+..+.+++.+||..||.+|||+.|+++
T Consensus 227 ~~~i~~------------~~~~~~~----------------~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 227 LANITA------------VSYDFDE----------------EFFSQTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp HHHHHT------------TCCCCCH----------------HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHHHHh------------cCCCCCc----------------hhccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 000000 0000000 001123456789999999999999999999985
No 64
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.2e-40 Score=362.61 Aligned_cols=252 Identities=21% Similarity=0.267 Sum_probs=205.0
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCceEE
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 762 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 762 (1008)
.++|++.+.||+|+||.||+|.+..+++.||+|+++.. ......+.+|+++++.++||||+++++++ .+.+..+
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~-----~~~~~~~ 77 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-GTDQVLVKKEISILNIARHRNILHLHESF-----ESMEELV 77 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-THHHHHHHHHHHHHHHSCCTTBCCEEEEE-----EETTEEE
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC-cccHHHHHHHHHHHHhCCCCCCCeEeEEE-----ecCCEEE
Confidence 46899999999999999999999999999999999754 34456789999999999999999999995 5566799
Q ss_pred EEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecC--CCCeEE
Q 045798 763 IVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDN--DLSGHI 840 (1008)
Q Consensus 763 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~--~~~~kL 840 (1008)
+||||+++|+|.+++..... .+++.+++.++.||+.||+|||+. +|+||||||+||+++. ++.+||
T Consensus 78 lv~e~~~g~~L~~~l~~~~~---------~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl 145 (321)
T 1tki_A 78 MIFEFISGLDIFERINTSAF---------ELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKI 145 (321)
T ss_dssp EEECCCCCCBHHHHHTSSSC---------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEE
T ss_pred EEEEeCCCCCHHHHHHhcCC---------CCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEE
Confidence 99999999999999975431 689999999999999999999998 9999999999999987 789999
Q ss_pred cccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHHhh
Q 045798 841 GDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFARMA 920 (1008)
Q Consensus 841 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~~~ 920 (1008)
+|||++........ .....||+.|+|||++.+..++.++||||+||++|+|++|..||...... ........
T Consensus 146 ~Dfg~a~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~~~i~~-- 217 (321)
T 1tki_A 146 IEFGQARQLKPGDN-----FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ-QIIENIMN-- 217 (321)
T ss_dssp CCCTTCEECCTTCE-----EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH-HHHHHHHH--
T ss_pred EECCCCeECCCCCc-----cccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHH-HHHHHHHc--
Confidence 99999987644322 12245899999999999988999999999999999999999998642111 00011111
Q ss_pred CCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 921 LPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 921 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
....... ......+.++.+++.+||+.||.+|||+.|+++
T Consensus 218 ----------~~~~~~~----------------~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~ 257 (321)
T 1tki_A 218 ----------AEYTFDE----------------EAFKEISIEAMDFVDRLLVKERKSRMTASEALQ 257 (321)
T ss_dssp ----------TCCCCCH----------------HHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ----------CCCCCCh----------------hhhccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 0000000 011134556899999999999999999999987
No 65
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=3.9e-40 Score=371.07 Aligned_cols=271 Identities=21% Similarity=0.396 Sum_probs=211.3
Q ss_pred hcCCCCCceEeeccCeeEEEEEEc-------CCCeEEEEEEecccc-chhhHHHHHHHHHHhhc-CCCCceeeeeccccc
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALD-------EDGIVVAIKVINLQC-EGASKSFMAECKALKNI-RHRNLVKVITSCSSI 753 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~-------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 753 (1008)
.++|++.+.||+|+||.||+|++. .++..||||+++... ....+.+.+|+++++++ +||||++++++|
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~--- 156 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC--- 156 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEE---
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEE---
Confidence 467999999999999999999874 345689999997543 34456899999999999 899999999995
Q ss_pred cccCCceEEEEEeccCCCChhcccccCCCCCCC------cccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCC
Q 045798 754 DFQGNDFKAIVYEYMPNGSLEKWLHPHAVPKRD------KEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKP 827 (1008)
Q Consensus 754 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~------~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp 827 (1008)
..++..|+||||+++|+|.+++......... ......+++.+++.++.||+.||+|||+. +|+||||||
T Consensus 157 --~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp 231 (370)
T 2psq_A 157 --TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAA 231 (370)
T ss_dssp --CSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCG
T ss_pred --ccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---Ceeccccch
Confidence 4556789999999999999999865432100 00112689999999999999999999998 999999999
Q ss_pred CCeeecCCCCeEEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHh-CCCCCCcc
Q 045798 828 SNILLDNDLSGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVT-AKKPTDVM 906 (1008)
Q Consensus 828 ~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-G~~pf~~~ 906 (1008)
+||+++.++.+||+|||+++......... ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||...
T Consensus 232 ~NIll~~~~~~kl~DFG~a~~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~ 309 (370)
T 2psq_A 232 RNVLVTENNVMKIADFGLARDINNIDYYK--KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI 309 (370)
T ss_dssp GGEEECTTCCEEECCCSSCEETTCCCTTC--TTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred hhEEECCCCCEEEccccCCcccCccccee--cccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCC
Confidence 99999999999999999998654432211 1223457889999999999999999999999999999999 99998643
Q ss_pred ccCCccHHHHHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 907 FEGDLNLHNFARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
... .......... . .. ....++.++.+++.+||+.||++|||+.|+++
T Consensus 310 ~~~--~~~~~~~~~~------------~----------------~~--~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~ 357 (370)
T 2psq_A 310 PVE--ELFKLLKEGH------------R----------------MD--KPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 357 (370)
T ss_dssp CGG--GHHHHHHTTC------------C----------------CC--CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CHH--HHHHHHhcCC------------C----------------CC--CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 111 0000000000 0 00 00124556899999999999999999999999
Q ss_pred HHHHHHHHH
Q 045798 987 ELQSVKNIL 995 (1008)
Q Consensus 987 ~L~~i~~~~ 995 (1008)
.|+++....
T Consensus 358 ~L~~il~~~ 366 (370)
T 2psq_A 358 DLDRILTLT 366 (370)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999987653
No 66
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=3.3e-40 Score=362.15 Aligned_cols=263 Identities=30% Similarity=0.440 Sum_probs=202.2
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEecccc--chhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCce
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQC--EGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDF 760 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 760 (1008)
.++|++.+.||+|+||.||+|.+. ..+|+|+++... ....+.+.+|++++++++||||+++++++. .+.
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~---~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~------~~~ 105 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWH---GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT------KDN 105 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESS---SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC------SSS
T ss_pred ccceEEEeEecCCCCeEEEEEEEC---CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc------cCc
Confidence 468999999999999999999874 358999887432 344578999999999999999999999842 344
Q ss_pred EEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeEE
Q 045798 761 KAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGHI 840 (1008)
Q Consensus 761 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 840 (1008)
.++||||+++++|.+++..... .+++.+++.++.||+.||+|||+. +|+||||||+||+++.++.+||
T Consensus 106 ~~lv~e~~~~~~L~~~l~~~~~---------~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl 173 (307)
T 3lb7_A 106 LAIVTQWCEGSSLYKHLHVQET---------KFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKI 173 (307)
T ss_dssp CEEEEECCSSCBHHHHHHTSCC---------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEE
T ss_pred EEEEEecCCCCcHHHHHHhccc---------CCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEE
Confidence 7999999999999999964432 689999999999999999999998 9999999999999999999999
Q ss_pred cccCcccccccccCccccccccccccccccCccccC---CCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHH
Q 045798 841 GDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGL---GSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFA 917 (1008)
Q Consensus 841 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~ 917 (1008)
+|||+++......... ......||+.|+|||++. +..++.++|||||||++|||++|+.||......+.......
T Consensus 174 ~DFg~a~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~ 251 (307)
T 3lb7_A 174 GDFGLATVKSRWSGSQ--QVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVG 251 (307)
T ss_dssp CCCCSSCC--------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHH
T ss_pred ccCCCceecccccccc--cccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHHHHHh
Confidence 9999998654322111 122346999999999875 56788999999999999999999999974322111111111
Q ss_pred HhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHHHHHHHHHH
Q 045798 918 RMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHELQSVKNIL 995 (1008)
Q Consensus 918 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~i~~~~ 995 (1008)
.......... ....++..+.+++.+||+.||++|||+.||++.|+.++...
T Consensus 252 ~~~~~~~~~~---------------------------~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~ 302 (307)
T 3lb7_A 252 RGYASPDLSK---------------------------LYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp HTCCCCCSTT---------------------------SCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred cCCCCcchhh---------------------------hhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhc
Confidence 1101100000 01124566899999999999999999999999999887654
No 67
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=4.1e-40 Score=364.75 Aligned_cols=249 Identities=24% Similarity=0.304 Sum_probs=203.1
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccc---cchhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCc
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQ---CEGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGND 759 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 759 (1008)
.++|++.+.||+|+||.||+|+...+++.||+|+++.. .......+.+|+++++.++||||++++++ +...+
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~-----~~~~~ 78 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYA-----FQTHD 78 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEE-----EECSS
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEE-----EEeCC
Confidence 46799999999999999999999989999999999743 23345678999999999999999999998 45667
Q ss_pred eEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeE
Q 045798 760 FKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGH 839 (1008)
Q Consensus 760 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 839 (1008)
..|+||||+++|+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+|
T Consensus 79 ~~~lv~E~~~gg~L~~~l~~~~----------~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vk 145 (337)
T 1o6l_A 79 RLCFVMEYANGGELFFHLSRER----------VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIK 145 (337)
T ss_dssp EEEEEEECCTTCBHHHHHHHHS----------CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEE
T ss_pred EEEEEEeCCCCCcHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEE
Confidence 8999999999999999987543 689999999999999999999998 999999999999999999999
Q ss_pred EcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHHh
Q 045798 840 IGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFARM 919 (1008)
Q Consensus 840 L~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~~ 919 (1008)
|+|||+++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..... .....
T Consensus 146 L~DFG~a~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-----~~~~~- 215 (337)
T 1o6l_A 146 ITDFGLCKEGISDGA----TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-----ERLFE- 215 (337)
T ss_dssp ECCCTTCBCSCCTTC----CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHH-
T ss_pred EeeccchhhcccCCC----cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCH-----HHHHH-
Confidence 999999985432221 12335699999999999999999999999999999999999999863211 00000
Q ss_pred hCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCC-----CHHHHHH
Q 045798 920 ALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRM-----NMTNVVH 986 (1008)
Q Consensus 920 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~evl~ 986 (1008)
.+..... .++ ...+.++.+++.+||+.||++|| +++|+++
T Consensus 216 -------~i~~~~~--------------~~p------~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~ 260 (337)
T 1o6l_A 216 -------LILMEEI--------------RFP------RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp -------HHHHCCC--------------CCC------TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred -------HHHcCCC--------------CCC------CCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence 0000000 001 01345678999999999999999 8998876
No 68
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=2.9e-40 Score=360.57 Aligned_cols=262 Identities=25% Similarity=0.363 Sum_probs=205.5
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEecccc---chhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCc
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQC---EGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGND 759 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 759 (1008)
.++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|+.++++++||||+++++++ ..++
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~-----~~~~ 84 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVD-----EEDD 84 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEE-----ECSS
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEee-----eeCC
Confidence 467999999999999999999998899999999986432 33456899999999999999999999994 5667
Q ss_pred eEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeE
Q 045798 760 FKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGH 839 (1008)
Q Consensus 760 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 839 (1008)
..++||||+++++|.+++.... ++++..++.++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 85 ~~~lv~e~~~g~~L~~~l~~~~----------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~k 151 (294)
T 4eqm_A 85 CYYLVMEYIEGPTLSEYIESHG----------PLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLK 151 (294)
T ss_dssp EEEEEEECCCSCBHHHHHHHHC----------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEE
T ss_pred eEEEEEeCCCCCCHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEE
Confidence 7999999999999999997543 689999999999999999999998 999999999999999999999
Q ss_pred EcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHHh
Q 045798 840 IGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFARM 919 (1008)
Q Consensus 840 L~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~~ 919 (1008)
|+|||+++........ ......||+.|+|||++.+..++.++||||+|+++|||++|+.||....... .....
T Consensus 152 l~Dfg~~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~----~~~~~ 224 (294)
T 4eqm_A 152 IFDFGIAKALSETSLT---QTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVS----IAIKH 224 (294)
T ss_dssp ECCCSSSTTC----------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHH----HHHHH
T ss_pred EEeCCCcccccccccc---ccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH----HHHHH
Confidence 9999999866433221 1223458999999999999999999999999999999999999986432110 00000
Q ss_pred hCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCC-CHHHHHHHHHHHHH
Q 045798 920 ALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRM-NMTNVVHELQSVKN 993 (1008)
Q Consensus 920 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-t~~evl~~L~~i~~ 993 (1008)
. ........ .. .....+..+.+++.+||+.||++|| +++++.+.|+++..
T Consensus 225 ~---------~~~~~~~~---------~~------~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~ 275 (294)
T 4eqm_A 225 I---------QDSVPNVT---------TD------VRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLH 275 (294)
T ss_dssp H---------SSCCCCHH---------HH------SCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSS
T ss_pred h---------hccCCCcc---------hh------cccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHh
Confidence 0 00000000 00 0112456689999999999999998 89999999887643
No 69
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=2.7e-40 Score=372.63 Aligned_cols=262 Identities=27% Similarity=0.481 Sum_probs=197.7
Q ss_pred hcCCCCCceEeeccCeeEEEEEEc---CCCeEEEEEEecccc-chhhHHHHHHHHHHhhcCCCCceeeeeccccccccCC
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALD---EDGIVVAIKVINLQC-EGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGN 758 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~---~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 758 (1008)
.++|++.+.||+|+||.||+|++. .++..||||+++... ....+.+.+|++++++++||||++++++| ..+
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-----~~~ 118 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVV-----TKS 118 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-----CSS
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEE-----eeC
Confidence 457999999999999999999986 457789999997543 34456899999999999999999999995 445
Q ss_pred ceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCe
Q 045798 759 DFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSG 838 (1008)
Q Consensus 759 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 838 (1008)
+..++||||+++|+|.+++..... .+++.+++.++.||+.||+|||+. +|+||||||+||+++.++.+
T Consensus 119 ~~~~lv~e~~~~~sL~~~l~~~~~---------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~ 186 (373)
T 2qol_A 119 KPVMIVTEYMENGSLDSFLRKHDA---------QFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVC 186 (373)
T ss_dssp SSCEEEEECCTTCBHHHHHHTTTT---------CSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCE
T ss_pred CceEEEEeCCCCCcHHHHHHhCCC---------CCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCE
Confidence 678999999999999999976432 689999999999999999999998 99999999999999999999
Q ss_pred EEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHh-CCCCCCccccCCccHHHHH
Q 045798 839 HIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVT-AKKPTDVMFEGDLNLHNFA 917 (1008)
Q Consensus 839 kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-G~~pf~~~~~~~~~~~~~~ 917 (1008)
||+|||+++.......... ......+++.|+|||++.+..++.++|||||||++|||++ |+.||...... ..
T Consensus 187 kl~Dfg~a~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~-----~~- 259 (373)
T 2qol_A 187 KVSDFGLGRVLEDDPEAAY-TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-----DV- 259 (373)
T ss_dssp EECCC-----------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHH-----HH-
T ss_pred EECcCccccccccCCccce-eccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHH-----HH-
Confidence 9999999987654332211 1122335788999999998899999999999999999998 99998643110 00
Q ss_pred HhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHHHHHHHHH
Q 045798 918 RMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHELQSVKNI 994 (1008)
Q Consensus 918 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~i~~~ 994 (1008)
...+..... .+ ....++..+.+++.+||+.||++||++.||++.|+++...
T Consensus 260 --------~~~i~~~~~--------------~~----~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~ 310 (373)
T 2qol_A 260 --------IKAVDEGYR--------------LP----PPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310 (373)
T ss_dssp --------HHHHHTTEE--------------CC----CCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred --------HHHHHcCCC--------------CC----CCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhC
Confidence 000100000 00 0112456689999999999999999999999999988654
No 70
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=2.9e-40 Score=372.33 Aligned_cols=281 Identities=21% Similarity=0.281 Sum_probs=216.3
Q ss_pred CCHHHHHHHhcCCCCCceEeeccCeeEEEEEE-----cCCCeEEEEEEeccccc-hhhHHHHHHHHHHhhc-CCCCceee
Q 045798 674 MSYKSLLKATNGFSSTHLIGVGSFGCVYKGAL-----DEDGIVVAIKVINLQCE-GASKSFMAECKALKNI-RHRNLVKV 746 (1008)
Q Consensus 674 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-----~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~ 746 (1008)
+...+.....++|++.+.||+|+||.||+|++ ..+++.||||+++.... ...+.+.+|++++.++ +||||+++
T Consensus 12 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~ 91 (359)
T 3vhe_A 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 91 (359)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeee
Confidence 34455555678999999999999999999984 45678999999975433 3456799999999999 89999999
Q ss_pred eeccccccccCCceEEEEEeccCCCChhcccccCCCCCCC----------------------------------------
Q 045798 747 ITSCSSIDFQGNDFKAIVYEYMPNGSLEKWLHPHAVPKRD---------------------------------------- 786 (1008)
Q Consensus 747 ~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~---------------------------------------- 786 (1008)
+++|. ..+...++||||+++|+|.+++.........
T Consensus 92 ~~~~~----~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (359)
T 3vhe_A 92 LGACT----KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGF 167 (359)
T ss_dssp EEEEC----STTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC--------------------------------------
T ss_pred eeeee----cCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccc
Confidence 99964 3345589999999999999999765421000
Q ss_pred ----------------cccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeEEcccCcccccc
Q 045798 787 ----------------KEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGHIGDFGLARFHQ 850 (1008)
Q Consensus 787 ----------------~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~ 850 (1008)
......+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~ 244 (359)
T 3vhe_A 168 VEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIY 244 (359)
T ss_dssp ----------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTT
T ss_pred ccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeec
Confidence 00011389999999999999999999998 99999999999999999999999999998664
Q ss_pred cccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCcchhhhh
Q 045798 851 EVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVT-AKKPTDVMFEGDLNLHNFARMALPNQVMDIV 929 (1008)
Q Consensus 851 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 929 (1008)
...... ......||+.|+|||++.+..++.++|||||||++|||++ |+.||........ ............
T Consensus 245 ~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~-~~~~~~~~~~~~----- 316 (359)
T 3vhe_A 245 KDPDYV--RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-FCRRLKEGTRMR----- 316 (359)
T ss_dssp SCTTCE--EC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH-HHHHHHHTCCCC-----
T ss_pred ccccch--hccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHH-HHHHHHcCCCCC-----
Confidence 433221 2233558999999999988899999999999999999998 9999864322111 111111000000
Q ss_pred cccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHHHHHHHHH
Q 045798 930 DPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHELQSVKNI 994 (1008)
Q Consensus 930 d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~i~~~ 994 (1008)
. ....+.++.+++.+||+.||.+|||++|+++.|+++.+.
T Consensus 317 -------------------~------~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 356 (359)
T 3vhe_A 317 -------------------A------PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 356 (359)
T ss_dssp -------------------C------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -------------------C------CCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHH
Confidence 0 011345678999999999999999999999999998765
No 71
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=5.7e-39 Score=370.91 Aligned_cols=320 Identities=20% Similarity=0.196 Sum_probs=211.7
Q ss_pred ccCcCccCCccCCeeeecCCCCCCCCCccccCCCCCCEEEccCCCCCCccCcccccCcCcceEeeeccccccCCCccccc
Q 045798 69 SLSPHLGNLSFLREINLSNNTIQGEIPPEFGRLFRLEALFLSNNSLVGKIPANLSYCSRLTVLCIEYNKLQGRIPLEFVS 148 (1008)
Q Consensus 69 ~l~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~ 148 (1008)
..+..++.+++|++|+|++|.+++. | .|..+++|++|+|++|++++. | ++.+++|++|++++|++++. + +++
T Consensus 33 ~~~~~~~~l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~ 104 (457)
T 3bz5_A 33 TDTISEEQLATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTP 104 (457)
T ss_dssp TSEEEHHHHTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTT
T ss_pred ccccChhHcCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCC
Confidence 3444566777788888888887753 4 577788888888888887753 3 77778888888888887753 3 777
Q ss_pred cCCCCeeecccccCCCCCCCCCccccccchhhcccccCCCCCCccccCCCCCcEEEecCCcccccCCccccCCCCcceec
Q 045798 149 LSKLKDLSLAKNKLTGGIPPFLGNLTSLEVLSLAGNSFGRNIPDSLGQLKQLKILAIGGNNLSGPIPPSIYNLSFLVVFS 228 (1008)
Q Consensus 149 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 228 (1008)
+++|++|++++|++++ ++ ++.+++|++|++++|++++. .++.+++|++|++++|...+.+ .+..+++|+.|+
T Consensus 105 l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ 176 (457)
T 3bz5_A 105 LTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLD 176 (457)
T ss_dssp CTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC---CCTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEE
T ss_pred CCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCcccee---ccccCCcCCEEECCCCCccccc--ccccCCcCCEEE
Confidence 7788888888887775 33 77777788888888877663 2677777888888777544443 466777777777
Q ss_pred cccccccccCChhhhhcCCCCcEEEeccccCCCCCCcccccCCCCceeecccccccccccccccCCCcccccccccccCC
Q 045798 229 VSHNQIHGSLPPSLGLLLPNLKFFQIHHNFFSGSIPISLSNASKLEHIEIANNNFSGKLSVNFGGMKNLSLLNLQFSNLG 308 (1008)
Q Consensus 229 ls~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~ 308 (1008)
+++|+++ .+| +..+++|+.|++++|.+++. .+..+++|++|++++|+++++ | +..+++|+.|++++|+++
T Consensus 177 ls~n~l~-~l~---l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~i-p--~~~l~~L~~L~l~~N~l~ 246 (457)
T 3bz5_A 177 CSFNKIT-ELD---VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTEI-D--VTPLTQLTYFDCSVNPLT 246 (457)
T ss_dssp CCSSCCC-CCC---CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCS
T ss_pred CCCCccc-eec---cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCccccc-C--ccccCCCCEEEeeCCcCC
Confidence 7777777 355 33467777777777777753 366777777777777777763 2 566666666666666665
Q ss_pred CCCCCcccccccccccCCCcEEEecCCcCCccCChhhhhhcccceeeeeccccccCCCCCccccccccceEEecCccccC
Q 045798 309 SGESDEMGFMNSLTNCSKLRVLSLGGNQFRGALPHSIANLSSQLQILILSSNQFYGSIPLGIGNLVDLYLLGMVENQFTG 388 (1008)
Q Consensus 309 ~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~ 388 (1008)
... +..+++|+.|++++|+ |+.|++++|.+.+.+| ++.+++|+.|++++|.+.+
T Consensus 247 ~~~---------~~~l~~L~~L~l~~n~---------------L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~ 300 (457)
T 3bz5_A 247 ELD---------VSTLSKLTTLHCIQTD---------------LLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLY 300 (457)
T ss_dssp CCC---------CTTCTTCCEEECTTCC---------------CSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCC
T ss_pred CcC---------HHHCCCCCEEeccCCC---------------CCEEECCCCccCCccc--ccccccCCEEECCCCcccc
Confidence 532 2345566666665542 4456666666665555 3455666666666666555
Q ss_pred CcchhccCCCCCceEEccCCcccccccccccCCCCcceeeccccccccccCCCCcCCCcccEeeccccccc
Q 045798 389 AIPKEMGKLQKLQGLDFSGNHFSGEIPSSLGNLSSLYEVFFNNNNLSGVIPFSLGNLKRLAFLEMSGNELS 459 (1008)
Q Consensus 389 ~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 459 (1008)
.+|. ...+|+.|++++| ++|++|++++|++++. + ++++++|+.|++++|+++
T Consensus 301 ~l~~---~~~~L~~L~l~~~-------------~~L~~L~L~~N~l~~l-~--l~~l~~L~~L~l~~N~l~ 352 (457)
T 3bz5_A 301 LLDC---QAAGITELDLSQN-------------PKLVYLYLNNTELTEL-D--VSHNTKLKSLSCVNAHIQ 352 (457)
T ss_dssp EEEC---TTCCCSCCCCTTC-------------TTCCEEECTTCCCSCC-C--CTTCTTCSEEECCSSCCC
T ss_pred eecc---CCCcceEechhhc-------------ccCCEEECCCCccccc-c--cccCCcCcEEECCCCCCC
Confidence 5553 2344555555444 4566666666666653 2 666666666666666665
No 72
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=1.6e-40 Score=375.78 Aligned_cols=261 Identities=26% Similarity=0.389 Sum_probs=209.0
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEecccc-chhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCceE
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQC-EGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDFK 761 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 761 (1008)
.++|.+.+.||+|+||.||+|.+..+++.||||+++... ....+.+.+|++++++++||||++++++| ..++..
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~-----~~~~~~ 187 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC-----TQKQPI 187 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEE-----CSSSSC
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-----ecCCCc
Confidence 467899999999999999999998889999999987543 23445789999999999999999999995 445668
Q ss_pred EEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeEEc
Q 045798 762 AIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGHIG 841 (1008)
Q Consensus 762 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 841 (1008)
++||||+++|+|.+++.... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 188 ~lv~e~~~~g~L~~~l~~~~---------~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~ 255 (377)
T 3cbl_A 188 YIVMELVQGGDFLTFLRTEG---------ARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKIS 255 (377)
T ss_dssp EEEEECCTTCBHHHHHHHHG---------GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEEC
T ss_pred EEEEEcCCCCCHHHHHHhcC---------CCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEEC
Confidence 99999999999999997542 1689999999999999999999998 99999999999999999999999
Q ss_pred ccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHh-CCCCCCccccCCccHHHHHHhh
Q 045798 842 DFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVT-AKKPTDVMFEGDLNLHNFARMA 920 (1008)
Q Consensus 842 Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-G~~pf~~~~~~~~~~~~~~~~~ 920 (1008)
|||+++....... ........++..|+|||++.+..++.++|||||||++|||++ |..||...... .....
T Consensus 256 DfG~s~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~--~~~~~---- 327 (377)
T 3cbl_A 256 DFGMSREEADGVY--AASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ--QTREF---- 327 (377)
T ss_dssp CGGGCEECTTSEE--ECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHH--HHHHH----
T ss_pred cCCCceecCCCce--eecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHH----
Confidence 9999985433211 111112236788999999988889999999999999999998 99998643111 00001
Q ss_pred CCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHHHHHHHHH
Q 045798 921 LPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHELQSVKNI 994 (1008)
Q Consensus 921 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~i~~~ 994 (1008)
+... .+++ ....++.++.+++.+||+.||++|||++++++.|+++++.
T Consensus 328 --------~~~~--------------~~~~----~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~ 375 (377)
T 3cbl_A 328 --------VEKG--------------GRLP----CPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR 375 (377)
T ss_dssp --------HHTT--------------CCCC----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred --------HHcC--------------CCCC----CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence 1000 0000 0112455689999999999999999999999999998764
No 73
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=8.8e-40 Score=352.27 Aligned_cols=258 Identities=24% Similarity=0.371 Sum_probs=207.7
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCceEE
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 762 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 762 (1008)
.++|++.+.||+|+||.||+|.+. +++.||+|+++... ...+.+.+|++++++++||||+++++++ .++...+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~~~~ 81 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVC-----LEQAPIC 81 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEE-----CSSSSEE
T ss_pred hhhceeeheecCCCccEEEEEEec-CCCeEEEEEecccc-cCHHHHHHHHHHHHhCCCCCEeeEEEEE-----ecCCceE
Confidence 357899999999999999999996 68889999997543 3346799999999999999999999995 4556689
Q ss_pred EEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeEEcc
Q 045798 763 IVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGHIGD 842 (1008)
Q Consensus 763 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 842 (1008)
+||||+++++|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 82 lv~e~~~~~~L~~~l~~~~~---------~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~D 149 (269)
T 4hcu_A 82 LVFEFMEHGCLSDYLRTQRG---------LFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSD 149 (269)
T ss_dssp EEEECCTTCBHHHHHHTTTT---------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECC
T ss_pred EEEEeCCCCcHHHHHHhcCc---------ccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEecc
Confidence 99999999999999965432 689999999999999999999998 999999999999999999999999
Q ss_pred cCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHh-CCCCCCccccCCccHHHHHHhhC
Q 045798 843 FGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVT-AKKPTDVMFEGDLNLHNFARMAL 921 (1008)
Q Consensus 843 fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-G~~pf~~~~~~~~~~~~~~~~~~ 921 (1008)
||.++....... .......+|+.|+|||++.+..++.++||||+|+++|+|++ |+.||...... ..........
T Consensus 150 fg~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~--~~~~~~~~~~ 224 (269)
T 4hcu_A 150 FGMTRFVLDDQY---TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS--EVVEDISTGF 224 (269)
T ss_dssp TTGGGGBCCHHH---HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHHHHTTC
T ss_pred cccccccccccc---ccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHH--HHHHHHhcCc
Confidence 999986543321 12233457888999999988899999999999999999999 99998642111 0000000000
Q ss_pred CcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHHHHHHHHH
Q 045798 922 PNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHELQSVKNI 994 (1008)
Q Consensus 922 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~i~~~ 994 (1008)
.. . .....+..+.+++.+||+.||++|||++|+++.|+++.+.
T Consensus 225 ~~----------------------------~--~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 225 RL----------------------------Y--KPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp CC----------------------------C--CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred cC----------------------------C--CCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 00 0 0011245578999999999999999999999999998763
No 74
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=1.5e-39 Score=365.01 Aligned_cols=253 Identities=19% Similarity=0.269 Sum_probs=203.8
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEecccc--chhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCce
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQC--EGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDF 760 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 760 (1008)
.++|++.+.||+|+||.||+|.+..+++.||+|+++... ....+.+.+|++++++++||||+++++++ .+++.
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~-----~~~~~ 102 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSI-----QEESF 102 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----ECSSE
T ss_pred ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEE-----EeCCE
Confidence 467999999999999999999999899999999997542 33456789999999999999999999994 56677
Q ss_pred EEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCC---CC
Q 045798 761 KAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDND---LS 837 (1008)
Q Consensus 761 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~---~~ 837 (1008)
.++||||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.+ +.
T Consensus 103 ~~lv~e~~~gg~L~~~l~~~~----------~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~ 169 (362)
T 2bdw_A 103 HYLVFDLVTGGELFEDIVARE----------FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAA 169 (362)
T ss_dssp EEEEECCCCSCBHHHHHTTCS----------CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCC
T ss_pred EEEEEecCCCCCHHHHHHHcC----------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCC
Confidence 999999999999999987653 689999999999999999999998 99999999999999765 45
Q ss_pred eEEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHH
Q 045798 838 GHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFA 917 (1008)
Q Consensus 838 ~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~ 917 (1008)
+||+|||++........ .....||+.|+|||++.+..++.++|||||||++|+|++|..||...... .......
T Consensus 170 ~kl~DfG~a~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~-~~~~~i~ 243 (362)
T 2bdw_A 170 VKLADFGLAIEVNDSEA-----WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH-RLYAQIK 243 (362)
T ss_dssp EEECCCTTCBCCTTCCS-----CCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHH
T ss_pred EEEeecCcceEecCCcc-----cccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH-HHHHHHH
Confidence 99999999986653321 22356999999999999999999999999999999999999998642110 0000000
Q ss_pred HhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHH
Q 045798 918 RMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHE 987 (1008)
Q Consensus 918 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 987 (1008)
..... .+.+.....+.++.+++.+||+.||++|||+.|+++.
T Consensus 244 ~~~~~----------------------------~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 244 AGAYD----------------------------YPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp HTCCC----------------------------CCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred hCCCC----------------------------CCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00000 0000111235567899999999999999999998763
No 75
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.6e-39 Score=360.00 Aligned_cols=252 Identities=21% Similarity=0.275 Sum_probs=203.6
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccch------hhHHHHHHHHHHhhcCCCCceeeeecccccccc
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEG------ASKSFMAECKALKNIRHRNLVKVITSCSSIDFQ 756 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 756 (1008)
.++|.+.+.||+|+||.||+|.+..+++.||+|+++..... ..+.+.+|+.++++++||||+++++++ .
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~ 84 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVY-----E 84 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEE-----E
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEE-----E
Confidence 35699999999999999999999989999999999754321 356799999999999999999999994 5
Q ss_pred CCceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCC
Q 045798 757 GNDFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDL 836 (1008)
Q Consensus 757 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 836 (1008)
.+...++||||+++++|.+++.... .+++..++.++.||+.||+|||+. +|+||||||+||+++.++
T Consensus 85 ~~~~~~lv~e~~~~~~L~~~l~~~~----------~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~ 151 (326)
T 2y0a_A 85 NKTDVILILELVAGGELFDFLAEKE----------SLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRN 151 (326)
T ss_dssp CSSEEEEEEECCCSCBHHHHHTTSS----------CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSS
T ss_pred eCCEEEEEEEcCCCCCHHHHHHhcC----------CcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCC
Confidence 5677999999999999999997543 689999999999999999999998 999999999999998887
Q ss_pred ----CeEEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCcc
Q 045798 837 ----SGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLN 912 (1008)
Q Consensus 837 ----~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~ 912 (1008)
.+||+|||+++....... .....||+.|+|||++.+..++.++|||||||++|+|++|..||....... .
T Consensus 152 ~~~~~~kl~Dfg~a~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~ 225 (326)
T 2y0a_A 152 VPKPRIKIIDFGLAHKIDFGNE-----FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE-T 225 (326)
T ss_dssp SSSCCEEECCCTTCEECCTTSC-----CCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH-H
T ss_pred CCCCCEEEEECCCCeECCCCCc-----cccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH-H
Confidence 899999999986643321 123459999999999998999999999999999999999999986421110 0
Q ss_pred HHHHHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 913 LHNFARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 913 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
......... .... ......+..+.+++.+||+.||++|||+.|+++
T Consensus 226 ~~~~~~~~~------------~~~~----------------~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 226 LANVSAVNY------------EFED----------------EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp HHHHHHTCC------------CCCH----------------HHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHHhcCC------------CcCc----------------cccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 000000000 0000 001123456789999999999999999999987
No 76
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.4e-39 Score=360.04 Aligned_cols=284 Identities=20% Similarity=0.249 Sum_probs=213.4
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEecccc-chhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCceE
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQC-EGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDFK 761 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 761 (1008)
.++|++.+.||+|+||+||+|++..+++.||||+++... ....+.+.+|++++++++||||+++++++.. ......
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---~~~~~~ 84 (319)
T 4euu_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEE---TTTRHK 84 (319)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEEC---TTTCCE
T ss_pred CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeec---CCCceE
Confidence 357999999999999999999999889999999997543 3345678899999999999999999998642 334478
Q ss_pred EEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeee----cCCCC
Q 045798 762 AIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILL----DNDLS 837 (1008)
Q Consensus 762 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll----~~~~~ 837 (1008)
++||||+++++|.+++...... ..+++..++.++.||+.||+|||+. +|+||||||+||++ +.++.
T Consensus 85 ~lv~e~~~~~~L~~~l~~~~~~-------~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~ 154 (319)
T 4euu_A 85 VLIMEFCPCGSLYTVLEEPSNA-------YGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSV 154 (319)
T ss_dssp EEEEECCTTCBHHHHHHSGGGT-------TCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEE
T ss_pred EEEEeCCCCCCHHHHHHHhccc-------cCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCce
Confidence 9999999999999999765321 1489999999999999999999998 99999999999999 77888
Q ss_pred eEEcccCcccccccccCccccccccccccccccCccccC--------CCCCCcccchhhHHHHHHHHHhCCCCCCccccC
Q 045798 838 GHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGL--------GSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEG 909 (1008)
Q Consensus 838 ~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~ 909 (1008)
+||+|||+++........ ....||+.|+|||++. +..++.++|||||||++|||++|+.||......
T Consensus 155 ~kL~Dfg~a~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~ 229 (319)
T 4euu_A 155 YKLTDFGAARELEDDEQF-----VSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGP 229 (319)
T ss_dssp EEECCCTTCEECCTTCCB-----CCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCG
T ss_pred EEEccCCCceecCCCCce-----eecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcc
Confidence 999999999866543221 2345899999999875 567899999999999999999999999643322
Q ss_pred CccHHHHH--HhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHH
Q 045798 910 DLNLHNFA--RMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHE 987 (1008)
Q Consensus 910 ~~~~~~~~--~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 987 (1008)
........ ....+......+...... .......++.........+..+.+++.+||+.||++|||++|+++.
T Consensus 230 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h 303 (319)
T 4euu_A 230 RRNKEVMYKIITGKPSGAISGVQKAENG------PIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAE 303 (319)
T ss_dssp GGCHHHHHHHHHHCCTTCCEEEECSTTC------CEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHH
T ss_pred chhHHHHHHHhcCCCcccchhhhcccCC------ccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhc
Confidence 22111111 111111100000000000 0000011122222335677889999999999999999999999988
Q ss_pred HHH
Q 045798 988 LQS 990 (1008)
Q Consensus 988 L~~ 990 (1008)
...
T Consensus 304 ~~d 306 (319)
T 4euu_A 304 TSD 306 (319)
T ss_dssp HHH
T ss_pred cHH
Confidence 764
No 77
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=3.5e-40 Score=368.05 Aligned_cols=294 Identities=23% Similarity=0.324 Sum_probs=209.0
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHH--HhhcCCCCceeeeeccccccccCCce
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKA--LKNIRHRNLVKVITSCSSIDFQGNDF 760 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~--l~~l~h~niv~~~~~~~~~~~~~~~~ 760 (1008)
.++|++.+.||+|+||.||+|+. +++.||||+++.. ....+..|.++ +..++||||+++++.+......+...
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 86 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFA---NRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRME 86 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE--TTEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEE
T ss_pred hHHhheeeecccCCCeEEEEEEE--CCeEEEEEEeecc---chhhHHHHHHHHHHHhccCcchhhheecccccccCCCce
Confidence 46899999999999999999987 6899999999743 22344444444 44589999999998766555666677
Q ss_pred EEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCC------CCCceeccCCCCCeeecC
Q 045798 761 KAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHC------QEPILHCDLKPSNILLDN 834 (1008)
Q Consensus 761 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~------~~~ivH~Dlkp~NIll~~ 834 (1008)
.++||||+++|+|.+++... ..++..++.++.||+.||+|||+.. .++|+||||||+||+++.
T Consensus 87 ~~lv~e~~~~g~L~~~l~~~-----------~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~ 155 (336)
T 3g2f_A 87 YLLVMEYYPNGSLXKYLSLH-----------TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKN 155 (336)
T ss_dssp EEEEECCCTTCBHHHHHHHC-----------CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECT
T ss_pred EEEEEecCCCCcHHHHHhhc-----------ccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcC
Confidence 89999999999999999654 4588999999999999999999852 228999999999999999
Q ss_pred CCCeEEcccCcccccccccCc----cccccccccccccccCccccCC-------CCCCcccchhhHHHHHHHHHhCCCCC
Q 045798 835 DLSGHIGDFGLARFHQEVSNS----TLSSSVGVKGTIGYTAPEYGLG-------SEVSTNGDVYSYGILLLEMVTAKKPT 903 (1008)
Q Consensus 835 ~~~~kL~Dfg~a~~~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~sDvwslG~vl~elltG~~pf 903 (1008)
++.+||+|||+++........ .........||+.|+|||++.+ ..++.++|||||||++|||++|..||
T Consensus 156 ~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~ 235 (336)
T 3g2f_A 156 DGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDL 235 (336)
T ss_dssp TSCEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGG
T ss_pred CCcEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcC
Confidence 999999999999866543211 1111223469999999999887 45678999999999999999998876
Q ss_pred CccccCCccHHHHHH-hhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHH
Q 045798 904 DVMFEGDLNLHNFAR-MALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMT 982 (1008)
Q Consensus 904 ~~~~~~~~~~~~~~~-~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ 982 (1008)
............+.. ........+. ..... .......++........++.++.+++.+||+.||++|||++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-------~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ 307 (336)
T 3g2f_A 236 FPGESVPEYQMAFQTEVGNHPTFEDM-QVLVS-------REKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQ 307 (336)
T ss_dssp STTSCCCCCCCTTHHHHCSSCCHHHH-HHHHT-------TSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHH
T ss_pred CCccchhHHHHhhhcccCCCchHHHH-Hhhhc-------ccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchH
Confidence 432221111111110 0000000000 00000 00001112222222335677899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 045798 983 NVVHELQSVKNILLELET 1000 (1008)
Q Consensus 983 evl~~L~~i~~~~~~~~~ 1000 (1008)
|+++.|+++...+.+-++
T Consensus 308 e~l~~L~~ll~~~~~~~~ 325 (336)
T 3g2f_A 308 XAEERMAELMMIWERNKS 325 (336)
T ss_dssp HHHHHHHHHHHCCCC---
T ss_pred HHHHHHHHHHHHHHhccc
Confidence 999999998876554443
No 78
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.4e-39 Score=356.32 Aligned_cols=252 Identities=23% Similarity=0.303 Sum_probs=196.6
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccc--------------------------hhhHHHHHHHHHHh
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCE--------------------------GASKSFMAECKALK 736 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--------------------------~~~~~~~~E~~~l~ 736 (1008)
.++|++.+.||+|+||.||+|.+..+++.||||++..... ...+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 4689999999999999999999998999999999864321 12356899999999
Q ss_pred hcCCCCceeeeeccccccccCCceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCC
Q 045798 737 NIRHRNLVKVITSCSSIDFQGNDFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHC 816 (1008)
Q Consensus 737 ~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ 816 (1008)
+++||||+++++++.. ...+..++||||+++++|.+++... .+++.+++.++.||+.||+|||+.
T Consensus 92 ~l~h~~iv~~~~~~~~---~~~~~~~lv~e~~~~~~l~~~~~~~-----------~~~~~~~~~~~~qi~~~l~~lH~~- 156 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDD---PNEDHLYMVFELVNQGPVMEVPTLK-----------PLSEDQARFYFQDLIKGIEYLHYQ- 156 (298)
T ss_dssp TCCCTTBCCEEEEEEC---SSSSEEEEEEECCTTCBSCCSSCSS-----------CCCHHHHHHHHHHHHHHHHHHHHT-
T ss_pred hCCCCCCCeEEEEEEc---CCCCEEEEEEecCCCCcHHHHhhcC-----------CCCHHHHHHHHHHHHHHHHHHHHC-
Confidence 9999999999999643 2356789999999999999876432 689999999999999999999998
Q ss_pred CCCceeccCCCCCeeecCCCCeEEcccCcccccccccCccccccccccccccccCccccCCCC---CCcccchhhHHHHH
Q 045798 817 QEPILHCDLKPSNILLDNDLSGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSE---VSTNGDVYSYGILL 893 (1008)
Q Consensus 817 ~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~sDvwslG~vl 893 (1008)
+|+||||||+||+++.++.+||+|||+++........ .....||+.|+|||++.+.. ++.++|||||||++
T Consensus 157 --~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l 230 (298)
T 2zv2_A 157 --KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDAL----LSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTL 230 (298)
T ss_dssp --TEECCCCCGGGEEECTTSCEEECCCTTCEECSSSSCE----ECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHH
T ss_pred --CeeccCCCHHHEEECCCCCEEEecCCCcccccccccc----ccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHH
Confidence 9999999999999999999999999999866443221 12346899999999987765 47889999999999
Q ss_pred HHHHhCCCCCCccccCCccHHHHHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCc
Q 045798 894 LEMVTAKKPTDVMFEGDLNLHNFARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSME 973 (1008)
Q Consensus 894 ~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 973 (1008)
|||++|+.||..... ........ ..... . +.....+.++.+++.+||+.
T Consensus 231 ~~l~~g~~pf~~~~~--~~~~~~~~-----------~~~~~--------------~----~~~~~~~~~l~~li~~~l~~ 279 (298)
T 2zv2_A 231 YCFVFGQCPFMDERI--MCLHSKIK-----------SQALE--------------F----PDQPDIAEDLKDLITRMLDK 279 (298)
T ss_dssp HHHHHSSCSSCCSSH--HHHHHHHH-----------HCCCC--------------C----CSSSCCCHHHHHHHHHHTCS
T ss_pred HHHHHCCCCCCCccH--HHHHHHHh-----------cccCC--------------C----CCccccCHHHHHHHHHHhhc
Confidence 999999999863211 00000000 00000 0 00012345689999999999
Q ss_pred CCCCCCCHHHHHH
Q 045798 974 SPQDRMNMTNVVH 986 (1008)
Q Consensus 974 dP~~RPt~~evl~ 986 (1008)
||++|||+.|+++
T Consensus 280 dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 280 NPESRIVVPEIKL 292 (298)
T ss_dssp CTTTSCCHHHHTT
T ss_pred ChhhCCCHHHHhc
Confidence 9999999999875
No 79
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=2e-39 Score=372.06 Aligned_cols=254 Identities=17% Similarity=0.202 Sum_probs=203.7
Q ss_pred HhcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEecccc--chhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCc
Q 045798 682 ATNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQC--EGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGND 759 (1008)
Q Consensus 682 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 759 (1008)
..++|++.+.||+|+||.||+|.+..+|+.||+|++.... ....+.+.+|++++++++||||+++++++ .+++
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~-----~~~~ 83 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSI-----SEEG 83 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEE-----ECSS
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEE-----EECC
Confidence 3567999999999999999999999999999999997543 23456789999999999999999999994 5677
Q ss_pred eEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeec---CCC
Q 045798 760 FKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLD---NDL 836 (1008)
Q Consensus 760 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~---~~~ 836 (1008)
..++||||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++ .++
T Consensus 84 ~~~lv~E~~~gg~L~~~i~~~~----------~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~ 150 (444)
T 3soa_A 84 HHYLIFDLVTGGELFEDIVARE----------YYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGA 150 (444)
T ss_dssp EEEEEECCCBCCBHHHHHHHCS----------CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTC
T ss_pred EEEEEEEeCCCCCHHHHHHHcC----------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCC
Confidence 8999999999999999987654 689999999999999999999998 999999999999998 568
Q ss_pred CeEEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHH
Q 045798 837 SGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNF 916 (1008)
Q Consensus 837 ~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~ 916 (1008)
.+||+|||++......... .....||+.|+|||++.+..++.++||||+||++|+|++|..||...... ......
T Consensus 151 ~vkL~DFG~a~~~~~~~~~----~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~-~~~~~i 225 (444)
T 3soa_A 151 AVKLADFGLAIEVEGEQQA----WFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQH-RLYQQI 225 (444)
T ss_dssp CEEECCCSSCBCCCTTCCB----CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHH
T ss_pred cEEEccCceeEEecCCCce----eecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHH-HHHHHH
Confidence 8999999999866543221 22356999999999999999999999999999999999999998642110 000011
Q ss_pred HHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 917 ARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 917 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
...... .+.+.....+.++.+++.+||+.||++|||+.|+++
T Consensus 226 ~~~~~~----------------------------~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 226 KAGAYD----------------------------FPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALK 267 (444)
T ss_dssp HHTCCC----------------------------CCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HhCCCC----------------------------CCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 000000 000011123456789999999999999999999987
No 80
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=6.4e-40 Score=362.76 Aligned_cols=247 Identities=26% Similarity=0.322 Sum_probs=200.8
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEecccc---chhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCc
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQC---EGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGND 759 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 759 (1008)
.++|.+.+.||+|+||.||+|.+..+++.||+|++.... ......+.+|+++++.++||||+++++++ ..++
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~-----~~~~ 82 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVI-----TTPT 82 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEE-----ECSS
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEE-----EeCC
Confidence 468999999999999999999998899999999986432 22345789999999999999999999995 4566
Q ss_pred eEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeE
Q 045798 760 FKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGH 839 (1008)
Q Consensus 760 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 839 (1008)
..++||||+ +|+|.+++.... .+++.+++.++.||+.||+|||+. +|+||||||+||+++.++.+|
T Consensus 83 ~~~lv~E~~-~g~l~~~l~~~~----------~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~k 148 (336)
T 3h4j_B 83 DIVMVIEYA-GGELFDYIVEKK----------RMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVK 148 (336)
T ss_dssp EEEEEECCC-CEEHHHHHHHHC----------SCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEE
T ss_pred EEEEEEECC-CCcHHHHHHHcC----------CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEE
Confidence 799999999 789999886543 689999999999999999999998 999999999999999999999
Q ss_pred EcccCcccccccccCccccccccccccccccCccccCCCCC-CcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHH
Q 045798 840 IGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEV-STNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFAR 918 (1008)
Q Consensus 840 L~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~ 918 (1008)
|+|||++........ .....||+.|+|||++.+..+ ++++||||+||++|+|++|+.||........
T Consensus 149 l~DFG~s~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~------- 216 (336)
T 3h4j_B 149 IADFGLSNIMTDGNF-----LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL------- 216 (336)
T ss_dssp ECCSSCTBTTTTSBT-----TCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC-------
T ss_pred EEEeccceeccCCcc-----cccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHH-------
Confidence 999999986544322 123459999999999988776 6899999999999999999999964321110
Q ss_pred hhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 919 MALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 919 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
........ ..++ ...+..+.+++.+||+.||.+|||++|+++
T Consensus 217 ----------~~~i~~~~----------~~~p------~~~s~~~~~li~~~L~~dP~~Rpt~~eil~ 258 (336)
T 3h4j_B 217 ----------FKKVNSCV----------YVMP------DFLSPGAQSLIRRMIVADPMQRITIQEIRR 258 (336)
T ss_dssp ----------BCCCCSSC----------CCCC------TTSCHHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred ----------HHHHHcCC----------CCCc------ccCCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence 00000000 0000 113445789999999999999999999976
No 81
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=2.8e-39 Score=364.60 Aligned_cols=253 Identities=20% Similarity=0.251 Sum_probs=205.4
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCceEE
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 762 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 762 (1008)
.++|++.+.||+|+||.||+|.+..+++.||+|++..........+.+|++++++++||||+++++++ .++...+
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~-----~~~~~~~ 124 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAF-----EDKYEMV 124 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEE-----ECSSEEE
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEE-----EeCCEEE
Confidence 46899999999999999999999989999999999866555667899999999999999999999994 5567799
Q ss_pred EEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecC--CCCeEE
Q 045798 763 IVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDN--DLSGHI 840 (1008)
Q Consensus 763 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~--~~~~kL 840 (1008)
+||||+++|+|.+++..... .+++..++.++.||+.||+|||+. +|+||||||+||+++. ++.+||
T Consensus 125 lv~E~~~gg~L~~~l~~~~~---------~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL 192 (387)
T 1kob_A 125 LILEFLSGGELFDRIAAEDY---------KMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKI 192 (387)
T ss_dssp EEEECCCCCBHHHHTTCTTC---------CBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEE
T ss_pred EEEEcCCCCcHHHHHHhhcC---------CCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEE
Confidence 99999999999999875431 689999999999999999999998 9999999999999974 578999
Q ss_pred cccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHHhh
Q 045798 841 GDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFARMA 920 (1008)
Q Consensus 841 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~~~ 920 (1008)
+|||+++........ ....||+.|+|||++.+..++.++|||||||++|||++|..||...... ..........
T Consensus 193 ~DFG~a~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~-~~~~~i~~~~ 266 (387)
T 1kob_A 193 IDFGLATKLNPDEIV-----KVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDL-ETLQNVKRCD 266 (387)
T ss_dssp CCCTTCEECCTTSCE-----EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH-HHHHHHHHCC
T ss_pred EecccceecCCCcce-----eeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHH-HHHHHHHhCC
Confidence 999999866443221 1235899999999999999999999999999999999999998642110 0001110000
Q ss_pred CCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 921 LPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 921 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
.. .. .......+.++.+++.+||+.||++|||+.|+++
T Consensus 267 ~~------------~~----------------~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 304 (387)
T 1kob_A 267 WE------------FD----------------EDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALE 304 (387)
T ss_dssp CC------------CC----------------SSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred CC------------CC----------------ccccccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence 00 00 0001123456799999999999999999999987
No 82
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=7.9e-40 Score=368.79 Aligned_cols=276 Identities=17% Similarity=0.236 Sum_probs=209.2
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCC-----CeEEEEEEeccccchh-----------hHHHHHHHHHHhhcCCCCceee
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDED-----GIVVAIKVINLQCEGA-----------SKSFMAECKALKNIRHRNLVKV 746 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~-----~~~vavK~~~~~~~~~-----------~~~~~~E~~~l~~l~h~niv~~ 746 (1008)
.++|++.+.||+|+||.||+|.+..+ ++.||||++....... ...+..|+..++.++||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 45899999999999999999998654 5789999987543211 1234456667778889999999
Q ss_pred eeccccccccCCceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCC
Q 045798 747 ITSCSSIDFQGNDFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLK 826 (1008)
Q Consensus 747 ~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlk 826 (1008)
++++... ..+..+.++||||+ +++|.+++..... .+++..++.|+.||+.||+|||+. +|+|||||
T Consensus 114 ~~~~~~~-~~~~~~~~lv~e~~-g~~L~~~~~~~~~---------~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlk 179 (364)
T 3op5_A 114 WGSGLHD-KNGKSYRFMIMDRF-GSDLQKIYEANAK---------RFSRKTVLQLSLRILDILEYIHEH---EYVHGDIK 179 (364)
T ss_dssp EEEEEEE-ETTEEEEEEEEECE-EEEHHHHHHHTTS---------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCC
T ss_pred Eeeeeec-cCCcceEEEEEeCC-CCCHHHHHHhccC---------CCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCC
Confidence 9997542 12335689999999 9999999976421 689999999999999999999998 99999999
Q ss_pred CCCeeec--CCCCeEEcccCcccccccccCccc---cccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCC
Q 045798 827 PSNILLD--NDLSGHIGDFGLARFHQEVSNSTL---SSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKK 901 (1008)
Q Consensus 827 p~NIll~--~~~~~kL~Dfg~a~~~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~ 901 (1008)
|+|||++ .++.+||+|||+++.......... .......||+.|+|||++.+..++.++|||||||++|||++|+.
T Consensus 180 p~Nill~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~ 259 (364)
T 3op5_A 180 ASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHL 259 (364)
T ss_dssp GGGEEEESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCC
T ss_pred HHHEEEecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCC
Confidence 9999999 889999999999987654332211 11233459999999999999999999999999999999999999
Q ss_pred CCCccccCCccHHHHHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCH
Q 045798 902 PTDVMFEGDLNLHNFARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNM 981 (1008)
Q Consensus 902 pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~ 981 (1008)
||...... .................++++.+.. ..++.++.+++..||+.||.+||++
T Consensus 260 Pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~li~~cl~~~p~~RP~~ 317 (364)
T 3op5_A 260 PWEDNLKD-PKYVRDSKIRYRENIASLMDKCFPA---------------------ANAPGEIAKYMETVKLLDYTEKPLY 317 (364)
T ss_dssp TTGGGTTC-HHHHHHHHHHHHHCHHHHHHHHSCT---------------------TCCCHHHHHHHHHHHTCCTTCCCCH
T ss_pred CccccccC-HHHHHHHHHHhhhhHHHHHHHhccc---------------------ccCHHHHHHHHHHHhcCCCCCCCCH
Confidence 99743221 1111111111112222222222110 1235678999999999999999999
Q ss_pred HHHHHHHHHHHHH
Q 045798 982 TNVVHELQSVKNI 994 (1008)
Q Consensus 982 ~evl~~L~~i~~~ 994 (1008)
++|++.|+.+.+.
T Consensus 318 ~~l~~~l~~~~~~ 330 (364)
T 3op5_A 318 ENLRDILLQGLKA 330 (364)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999987764
No 83
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=1.3e-39 Score=355.60 Aligned_cols=276 Identities=21% Similarity=0.288 Sum_probs=201.6
Q ss_pred cCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEecccc--chhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCceE
Q 045798 684 NGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQC--EGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDFK 761 (1008)
Q Consensus 684 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 761 (1008)
++|++.+.||+|+||+||+|.+..+++.||+|+++... ....+.+.+|++++++++||||+++++++ ..++..
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~ 76 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVL-----HSDKKL 76 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEE-----EETTEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEE-----EeCCEE
Confidence 57999999999999999999999899999999997543 33457789999999999999999999994 456779
Q ss_pred EEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeEEc
Q 045798 762 AIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGHIG 841 (1008)
Q Consensus 762 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 841 (1008)
++||||+++ ++.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 77 ~lv~e~~~~-~l~~~~~~~~~---------~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~ 143 (292)
T 3o0g_A 77 TLVFEFCDQ-DLKKYFDSCNG---------DLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLA 143 (292)
T ss_dssp EEEEECCSE-EHHHHHHHTTT---------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEEC
T ss_pred EEEEecCCC-CHHHHHHhCCC---------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEe
Confidence 999999965 66666544321 689999999999999999999998 99999999999999999999999
Q ss_pred ccCcccccccccCccccccccccccccccCccccCCCC-CCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHHhh
Q 045798 842 DFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSE-VSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFARMA 920 (1008)
Q Consensus 842 Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~~~ 920 (1008)
|||.++........ .....||+.|+|||++.+.. ++.++||||+||++|||++|..||.................
T Consensus 144 Dfg~~~~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~ 219 (292)
T 3o0g_A 144 NFGLARAFGIPVRC----YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLL 219 (292)
T ss_dssp CCTTCEECCSCCSC----CCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHH
T ss_pred ecccceecCCcccc----ccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHh
Confidence 99999865432221 22345899999999988766 79999999999999999999988643322222222222211
Q ss_pred CCcchhh--hhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 921 LPNQVMD--IVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 921 ~~~~~~~--~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
....... .....-...+ .... .............+.++.+++.+||+.||++|||++|+++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 220 GTPTEEQWPSMTKLPDYKP--YPMY---PATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp CCCCTTTCTTGGGSTTCCC--CCCC---CTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCCChhhhhhhcccccccc--cccc---cCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 1111000 0000000000 0000 0000000011124556789999999999999999999975
No 84
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.4e-39 Score=357.10 Aligned_cols=277 Identities=25% Similarity=0.325 Sum_probs=203.5
Q ss_pred HHHhcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhhc--CCCCceeeeeccccccccC
Q 045798 680 LKATNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKNI--RHRNLVKVITSCSSIDFQG 757 (1008)
Q Consensus 680 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~~~~~~~~~~~~~ 757 (1008)
....++|++.+.||+|+||.||+|++ .++.||||++... ....+.+|.+++... +||||+++++++.... ..
T Consensus 33 ~~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~-~~ 106 (337)
T 3mdy_A 33 RTIAKQIQMVKQIGKGRYGEVWMGKW--RGEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGT-GS 106 (337)
T ss_dssp TTHHHHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESC-GG
T ss_pred cccccceEEEeEeecCCCeEEEEEEE--CCceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCC-CC
Confidence 33457899999999999999999998 4899999998643 234455566666555 9999999999865321 12
Q ss_pred CceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCC-----CCCceeccCCCCCeee
Q 045798 758 NDFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHC-----QEPILHCDLKPSNILL 832 (1008)
Q Consensus 758 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~-----~~~ivH~Dlkp~NIll 832 (1008)
....++||||+++|+|.++++.. .+++..++.++.|++.||+|||+.. .++|+||||||+||++
T Consensus 107 ~~~~~lv~e~~~~g~L~~~l~~~-----------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill 175 (337)
T 3mdy_A 107 WTQLYLITDYHENGSLYDYLKST-----------TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILV 175 (337)
T ss_dssp GCEEEEEECCCTTCBHHHHHHHC-----------CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEE
T ss_pred CCceEEEEeccCCCcHHHHhhcc-----------CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEE
Confidence 25789999999999999999643 6899999999999999999999741 2389999999999999
Q ss_pred cCCCCeEEcccCcccccccccCccccccccccccccccCccccCCCCCCcc------cchhhHHHHHHHHHhCCC-----
Q 045798 833 DNDLSGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTN------GDVYSYGILLLEMVTAKK----- 901 (1008)
Q Consensus 833 ~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~------sDvwslG~vl~elltG~~----- 901 (1008)
+.++.+||+|||+++.................||+.|+|||++.+..++.+ +|||||||++|||++|..
T Consensus 176 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~ 255 (337)
T 3mdy_A 176 KKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIV 255 (337)
T ss_dssp CTTSCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBC
T ss_pred CCCCCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCccccc
Confidence 999999999999998665443332222334569999999999988766655 999999999999999954
Q ss_pred -----CCCccccCCccHHHHHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCC
Q 045798 902 -----PTDVMFEGDLNLHNFARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQ 976 (1008)
Q Consensus 902 -----pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~ 976 (1008)
||..................... .... .+......+++.++.+++.+||+.||+
T Consensus 256 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~--------~~~~-------------~~~~~~~~~~~~~l~~li~~~l~~dP~ 314 (337)
T 3mdy_A 256 EEYQLPYHDLVPSDPSYEDMREIVCIKK--------LRPS-------------FPNRWSSDECLRQMGKLMTECWAHNPA 314 (337)
T ss_dssp CCCCCTTTTTSCSSCCHHHHHHHHTTSC--------CCCC-------------CCGGGGGSHHHHHHHHHHHHHSCSSGG
T ss_pred ccccccHhhhcCCCCchhhhHHHHhhhc--------cCcc-------------ccccchhhHHHHHHHHHHHHhhhhChh
Confidence 44332222222111111110000 0000 000011236788899999999999999
Q ss_pred CCCCHHHHHHHHHHHHHH
Q 045798 977 DRMNMTNVVHELQSVKNI 994 (1008)
Q Consensus 977 ~RPt~~evl~~L~~i~~~ 994 (1008)
+|||+.||++.|+++.+.
T Consensus 315 ~Rps~~ell~~L~~l~~~ 332 (337)
T 3mdy_A 315 SRLTALRVKKTLAKMSES 332 (337)
T ss_dssp GSCCHHHHHHHHHHHHHT
T ss_pred hCCCHHHHHHHHHHHHhh
Confidence 999999999999998764
No 85
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=3.9e-40 Score=367.45 Aligned_cols=249 Identities=24% Similarity=0.302 Sum_probs=198.6
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccc---cchhhHHHHHHHHHHhhc-CCCCceeeeeccccccccCC
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQ---CEGASKSFMAECKALKNI-RHRNLVKVITSCSSIDFQGN 758 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~ 758 (1008)
.++|++.+.||+|+||.||+|++..+++.||||+++.. .....+.+.+|.++++.+ +||||++++++ +...
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~-----~~~~ 96 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCC-----FQTP 96 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEE-----EECS
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEE-----EEeC
Confidence 57899999999999999999999989999999999743 233456788999999988 79999999999 4567
Q ss_pred ceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCe
Q 045798 759 DFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSG 838 (1008)
Q Consensus 759 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 838 (1008)
+..|+||||+++|+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+
T Consensus 97 ~~~~lv~E~~~gg~L~~~l~~~~----------~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~i 163 (353)
T 3txo_A 97 DRLFFVMEFVNGGDLMFHIQKSR----------RFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHC 163 (353)
T ss_dssp SEEEEEEECCCSCBHHHHHHHHS----------SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCE
T ss_pred CEEEEEEeCCCCCcHHHHHHHcC----------CCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCE
Confidence 78999999999999999997654 789999999999999999999998 99999999999999999999
Q ss_pred EEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHH
Q 045798 839 HIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFAR 918 (1008)
Q Consensus 839 kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~ 918 (1008)
||+|||+|+....... ......||+.|+|||++.+..++.++||||+||++|||++|+.||......+ ......
T Consensus 164 kL~DFG~a~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~-~~~~i~- 237 (353)
T 3txo_A 164 KLADFGMCKEGICNGV----TTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDD-LFEAIL- 237 (353)
T ss_dssp EECCCTTCBCSCC-------------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHH-
T ss_pred EEccccceeecccCCc----cccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHH-HHHHHH-
Confidence 9999999985332221 1233569999999999988889999999999999999999999986431110 000000
Q ss_pred hhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCH------HHHHH
Q 045798 919 MALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNM------TNVVH 986 (1008)
Q Consensus 919 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~------~evl~ 986 (1008)
.... .++ ...+..+.+++.+||+.||++||++ +|+++
T Consensus 238 -----------~~~~--------------~~p------~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 238 -----------NDEV--------------VYP------TWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp -----------HCCC--------------CCC------TTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred -----------cCCC--------------CCC------CCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 0000 000 0123457899999999999999998 66654
No 86
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=5.1e-40 Score=353.97 Aligned_cols=258 Identities=26% Similarity=0.425 Sum_probs=207.0
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCceEE
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 762 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 762 (1008)
.++|++.+.||+|+||.||+|.+. ++..||+|+++... ...+.+.+|++++++++||||+++++++ ..+...+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~~~~ 79 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWK-GQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVC-----SKEYPIY 79 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECBTT-BCHHHHHHHHHHHHHCCCTTBCCEEEEE-----CSSSSEE
T ss_pred hhheeeeeeeccCCCceEEEEEec-CceeEEEEEeccCC-CcHHHHHHHHHHHHhCCCCCEeeEEEEE-----ccCCceE
Confidence 467999999999999999999886 67889999997553 3346799999999999999999999995 5566789
Q ss_pred EEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeEEcc
Q 045798 763 IVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGHIGD 842 (1008)
Q Consensus 763 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 842 (1008)
+||||+++++|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 80 lv~e~~~~~~L~~~l~~~~---------~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~D 147 (268)
T 3sxs_A 80 IVTEYISNGCLLNYLRSHG---------KGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSD 147 (268)
T ss_dssp EEEECCTTCBHHHHHHHHG---------GGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECC
T ss_pred EEEEccCCCcHHHHHHHcC---------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEcc
Confidence 9999999999999997542 1589999999999999999999998 999999999999999999999999
Q ss_pred cCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHh-CCCCCCccccCCccHHHHHHhhC
Q 045798 843 FGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVT-AKKPTDVMFEGDLNLHNFARMAL 921 (1008)
Q Consensus 843 fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-G~~pf~~~~~~~~~~~~~~~~~~ 921 (1008)
||.+......... ......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||....... .......
T Consensus 148 fg~~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~----~~~~~~~ 220 (268)
T 3sxs_A 148 FGMTRYVLDDQYV---SSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSE----VVLKVSQ 220 (268)
T ss_dssp TTCEEECCTTCEE---ECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHH----HHHHHHT
T ss_pred Cccceecchhhhh---cccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHH----HHHHHHc
Confidence 9999865443221 1223446788999999988889999999999999999999 999986432110 0000000
Q ss_pred CcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHHHHHHHHH
Q 045798 922 PNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHELQSVKNI 994 (1008)
Q Consensus 922 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~i~~~ 994 (1008)
. . ... .....+..+.+++.+||+.||.+|||+.|+++.|+++++.
T Consensus 221 ~---------~---------------~~~----~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (268)
T 3sxs_A 221 G---------H---------------RLY----RPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK 265 (268)
T ss_dssp T---------C---------------CCC----CCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred C---------C---------------CCC----CCCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence 0 0 000 0001234578999999999999999999999999987654
No 87
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=1.3e-39 Score=367.09 Aligned_cols=253 Identities=23% Similarity=0.322 Sum_probs=198.1
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEecccc---chhhHHHHHHHHHHhhc-CCCCceeeeeccccccccCC
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQC---EGASKSFMAECKALKNI-RHRNLVKVITSCSSIDFQGN 758 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~ 758 (1008)
.++|++.+.||+|+||.||+|++..+++.||+|+++... ....+.+.+|..++.++ +||||++++++ +..+
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~-----~~~~ 125 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSC-----FQTE 125 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEE-----EECS
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEE-----EEEC
Confidence 467999999999999999999999999999999997542 23345688999999887 89999999998 4567
Q ss_pred ceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCe
Q 045798 759 DFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSG 838 (1008)
Q Consensus 759 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 838 (1008)
+..++||||+++|+|..++.... .+++..++.++.||+.||+|||+. +|+||||||+|||++.++.+
T Consensus 126 ~~~~lV~E~~~gg~L~~~l~~~~----------~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~i 192 (396)
T 4dc2_A 126 SRLFFVIEYVNGGDLMFHMQRQR----------KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHI 192 (396)
T ss_dssp SEEEEEEECCTTCBHHHHHHHHS----------SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCE
T ss_pred CEEEEEEEcCCCCcHHHHHHHcC----------CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCE
Confidence 78999999999999999987643 789999999999999999999998 99999999999999999999
Q ss_pred EEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHH
Q 045798 839 HIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFAR 918 (1008)
Q Consensus 839 kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~ 918 (1008)
||+|||+|+....... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||......+....
T Consensus 193 kL~DFGla~~~~~~~~----~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~---- 264 (396)
T 4dc2_A 193 KLTDYGMCKEGLRPGD----TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ---- 264 (396)
T ss_dssp EECCCTTCBCCCCTTC----CBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC----------
T ss_pred EEeecceeeecccCCC----ccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccch----
Confidence 9999999985322221 12345699999999999999999999999999999999999999964321110000
Q ss_pred hhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCH
Q 045798 919 MALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNM 981 (1008)
Q Consensus 919 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~ 981 (1008)
.....+....... ...++ ...+.++.+++.+||+.||.+||++
T Consensus 265 ----~~~~~~~~~i~~~----------~~~~p------~~~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 265 ----NTEDYLFQVILEK----------QIRIP------RSLSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp ----CCHHHHHHHHHHC----------CCCCC------TTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred ----hhHHHHHHHHhcc----------ccCCC------CcCCHHHHHHHHHHhcCCHhHcCCC
Confidence 0000000000000 00011 1234567899999999999999997
No 88
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=5.6e-40 Score=369.64 Aligned_cols=272 Identities=23% Similarity=0.351 Sum_probs=209.9
Q ss_pred hcCCCCCceEeeccCeeEEEEEE-----cCCCeEEEEEEeccc-cchhhHHHHHHHHHHhhcCCCCceeeeecccccccc
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGAL-----DEDGIVVAIKVINLQ-CEGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQ 756 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~-----~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 756 (1008)
.++|++.+.||+|+||.||+|.+ ..+++.||||+++.. .......+.+|+.++++++||||+++++++ .
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~-----~ 144 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVS-----L 144 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----C
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEE-----e
Confidence 35789999999999999999994 446789999999744 234456799999999999999999999995 4
Q ss_pred CCceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCC
Q 045798 757 GNDFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDL 836 (1008)
Q Consensus 757 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 836 (1008)
.+...++||||+++|+|.+++........ ....+++.+++.++.||+.||+|||+. +|+||||||+|||++.++
T Consensus 145 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~ 218 (367)
T 3l9p_A 145 QSLPRFILLELMAGGDLKSFLRETRPRPS---QPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPG 218 (367)
T ss_dssp SSSSCEEEEECCTTEEHHHHHHHHSCCSS---SCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSS
T ss_pred cCCCCEEEEEeCCCCCHHHHHHhhccccC---ccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCC
Confidence 55668999999999999999976542111 112689999999999999999999998 999999999999999554
Q ss_pred ---CeEEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHh-CCCCCCccccCCcc
Q 045798 837 ---SGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVT-AKKPTDVMFEGDLN 912 (1008)
Q Consensus 837 ---~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-G~~pf~~~~~~~~~ 912 (1008)
.+||+|||+|+......... ......+|+.|+|||++.+..++.++|||||||++|||++ |..||...... .
T Consensus 219 ~~~~~kL~DFG~a~~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~--~ 294 (367)
T 3l9p_A 219 PGRVAKIGDFGMARDIYRAGYYR--KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ--E 294 (367)
T ss_dssp TTCCEEECCCHHHHHHHHHSSCT--TCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--H
T ss_pred CCceEEECCCccccccccccccc--cCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--H
Confidence 59999999998554332211 1223457899999999988899999999999999999998 99998643111 0
Q ss_pred HHHHHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHHHHHHH
Q 045798 913 LHNFARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHELQSVK 992 (1008)
Q Consensus 913 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~i~ 992 (1008)
......... . .. ....++..+.+++.+||+.||++|||+.||++.|+.+.
T Consensus 295 ~~~~i~~~~------------~--------------~~----~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~ 344 (367)
T 3l9p_A 295 VLEFVTSGG------------R--------------MD----PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCT 344 (367)
T ss_dssp HHHHHHTTC------------C--------------CC----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHcCC------------C--------------CC----CCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence 000000000 0 00 01123456889999999999999999999999999987
Q ss_pred HHHHHHH
Q 045798 993 NILLELE 999 (1008)
Q Consensus 993 ~~~~~~~ 999 (1008)
...+...
T Consensus 345 ~~~~~~~ 351 (367)
T 3l9p_A 345 QDPDVIN 351 (367)
T ss_dssp HCHHHHT
T ss_pred hChhhcc
Confidence 7655443
No 89
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=3.8e-39 Score=353.14 Aligned_cols=265 Identities=17% Similarity=0.186 Sum_probs=210.7
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhhc-CCCCceeeeeccccccccCCceE
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKNI-RHRNLVKVITSCSSIDFQGNDFK 761 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~ 761 (1008)
.++|++.+.||+|+||.||+|.+..+++.||||++... ...+.+.+|+++++++ +|++++++++++ ..+...
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~e~~~~~~l~~~~~i~~~~~~~-----~~~~~~ 81 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRR--SDAPQLRDEYRTYKLLAGCTGIPNVYYFG-----QEGLHN 81 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECC--TTSCCHHHHHHHHHHTTTCTTCCCEEEEE-----EETTEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccC--CccHHHHHHHHHHHHHhcCCCCCeEEeec-----CCCcee
Confidence 46799999999999999999999889999999998643 2335688999999999 899999999984 556778
Q ss_pred EEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCC----
Q 045798 762 AIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLS---- 837 (1008)
Q Consensus 762 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~---- 837 (1008)
++||||+ +++|.+++..... ++++..++.++.||+.||+|||+. +|+||||||+||+++.++.
T Consensus 82 ~lv~e~~-~~~L~~~l~~~~~---------~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~ 148 (298)
T 1csn_A 82 VLVIDLL-GPSLEDLLDLCGR---------KFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNAN 148 (298)
T ss_dssp EEEEECC-CCBHHHHHHHTTT---------CCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTT
T ss_pred EEEEEec-CCCHHHHHHHhcc---------CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCC
Confidence 9999999 9999999976431 589999999999999999999997 9999999999999987776
Q ss_pred -eEEcccCcccccccccCccc---cccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCcc-
Q 045798 838 -GHIGDFGLARFHQEVSNSTL---SSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLN- 912 (1008)
Q Consensus 838 -~kL~Dfg~a~~~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~- 912 (1008)
+||+|||+++.......... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.........
T Consensus 149 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~ 228 (298)
T 1csn_A 149 MIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQ 228 (298)
T ss_dssp CEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHH
T ss_pred eEEEEECccccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHH
Confidence 99999999987654432211 1223456999999999999999999999999999999999999999753221110
Q ss_pred -HHHHHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHHHHHH
Q 045798 913 -LHNFARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHELQSV 991 (1008)
Q Consensus 913 -~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~i 991 (1008)
.............. .....++.++.+++.+||+.||++|||+++|++.|+++
T Consensus 229 ~~~~~~~~~~~~~~~---------------------------~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~ 281 (298)
T 1csn_A 229 KYERIGEKKQSTPLR---------------------------ELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKV 281 (298)
T ss_dssp HHHHHHHHHHHSCHH---------------------------HHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred HHHHHHhhccCccHH---------------------------HHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHH
Confidence 00000000000000 00012456789999999999999999999999999988
Q ss_pred HHH
Q 045798 992 KNI 994 (1008)
Q Consensus 992 ~~~ 994 (1008)
.+.
T Consensus 282 ~~~ 284 (298)
T 1csn_A 282 LER 284 (298)
T ss_dssp HHH
T ss_pred HHh
Confidence 765
No 90
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=1.9e-39 Score=360.70 Aligned_cols=264 Identities=19% Similarity=0.220 Sum_probs=208.7
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhhc-CCCCceeeeeccccccccCCceE
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKNI-RHRNLVKVITSCSSIDFQGNDFK 761 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~ 761 (1008)
.++|++.+.||+|+||.||+|.+..+++.||||++.... ..+.+.+|+++++++ +||||+++++++ ..++..
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~~h~~i~~~~~~~-----~~~~~~ 80 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS--RAPQLHLEYRFYKQLGSGDGIPQVYYFG-----PCGKYN 80 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC--SSCCHHHHHHHHHHHCSCTTSCCEEEEE-----EETTEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHhhCCCCCCEEEEEE-----ecCCcc
Confidence 467999999999999999999998899999999987542 234688999999999 999999999984 456678
Q ss_pred EEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCC----
Q 045798 762 AIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLS---- 837 (1008)
Q Consensus 762 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~---- 837 (1008)
++||||+ +++|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.
T Consensus 81 ~lv~e~~-~~~L~~~~~~~~~---------~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~ 147 (330)
T 2izr_A 81 AMVLELL-GPSLEDLFDLCDR---------TFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQ 147 (330)
T ss_dssp EEEEECC-CCBHHHHHHHTTT---------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTT
T ss_pred EEEEEeC-CCCHHHHHHHcCC---------CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCc
Confidence 9999999 9999999976421 689999999999999999999998 9999999999999998887
Q ss_pred -eEEcccCcccccccccCccc---cccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCcc-
Q 045798 838 -GHIGDFGLARFHQEVSNSTL---SSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLN- 912 (1008)
Q Consensus 838 -~kL~Dfg~a~~~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~- 912 (1008)
+||+|||+++.......... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.........
T Consensus 148 ~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~ 227 (330)
T 2izr_A 148 VIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKE 227 (330)
T ss_dssp SEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHH
T ss_pred eEEEEEcccceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHH
Confidence 99999999987654332211 1123456999999999999999999999999999999999999999753211110
Q ss_pred -HHHHHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHHHHHH
Q 045798 913 -LHNFARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHELQSV 991 (1008)
Q Consensus 913 -~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~i 991 (1008)
.........+.. .+ ......+ ++.+++..||+.||.+||++++|.+.|+++
T Consensus 228 ~~~~i~~~~~~~~------------~~---------------~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~ 279 (330)
T 2izr_A 228 RYQKIGDTKRATP------------IE---------------VLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDL 279 (330)
T ss_dssp HHHHHHHHHHHSC------------HH---------------HHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred HHHHHHhhhccCC------------HH---------------HHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHH
Confidence 000000000000 00 0000123 789999999999999999999999999877
Q ss_pred HHH
Q 045798 992 KNI 994 (1008)
Q Consensus 992 ~~~ 994 (1008)
.+.
T Consensus 280 ~~~ 282 (330)
T 2izr_A 280 FDR 282 (330)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 91
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=3.6e-39 Score=362.27 Aligned_cols=251 Identities=24% Similarity=0.319 Sum_probs=201.3
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEecccc---chhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCc
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQC---EGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGND 759 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 759 (1008)
.++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|+++++.++||||+++++++ .+.+
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~-----~~~~ 88 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSF-----QDEE 88 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEE-----ECSS
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEE-----EeCC
Confidence 367999999999999999999999999999999986432 23456789999999999999999999994 5667
Q ss_pred eEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeE
Q 045798 760 FKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGH 839 (1008)
Q Consensus 760 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 839 (1008)
..|+||||+++|+|.+++.... .+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+|
T Consensus 89 ~~~lv~e~~~gg~L~~~l~~~~----------~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vk 155 (384)
T 4fr4_A 89 DMFMVVDLLLGGDLRYHLQQNV----------HFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVH 155 (384)
T ss_dssp EEEEEECCCTTEEHHHHHHTTC----------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEE
T ss_pred EEEEEEecCCCCcHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEE
Confidence 7999999999999999997654 689999999999999999999998 999999999999999999999
Q ss_pred EcccCcccccccccCccccccccccccccccCccccCC---CCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHH
Q 045798 840 IGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLG---SEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNF 916 (1008)
Q Consensus 840 L~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~ 916 (1008)
|+|||+|+....... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... ....
T Consensus 156 L~DFG~a~~~~~~~~-----~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~--~~~~ 228 (384)
T 4fr4_A 156 ITDFNIAAMLPRETQ-----ITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTS--SKEI 228 (384)
T ss_dssp ECCCTTCEECCTTCC-----BCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSC--HHHH
T ss_pred EeccceeeeccCCCc-----eeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCcc--HHHH
Confidence 999999986543221 233569999999999864 458999999999999999999999996432211 1111
Q ss_pred HHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCC-HHHHHH
Q 045798 917 ARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMN-MTNVVH 986 (1008)
Q Consensus 917 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt-~~evl~ 986 (1008)
.... ..... .++ ...+..+.+++.+||+.||.+||+ ++++.+
T Consensus 229 ~~~~--------~~~~~--------------~~p------~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 229 VHTF--------ETTVV--------------TYP------SAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp HHHH--------HHCCC--------------CCC------TTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred HHHH--------hhccc--------------CCC------CcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 0000 00000 000 123456789999999999999998 665543
No 92
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=2.7e-39 Score=352.18 Aligned_cols=254 Identities=27% Similarity=0.425 Sum_probs=201.1
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccchh-------hHHHHHHHHHHhhcCCCCceeeeeccccccc
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGA-------SKSFMAECKALKNIRHRNLVKVITSCSSIDF 755 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~-------~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 755 (1008)
.++|++.+.||+|+||.||+|++..+++.||+|++....... .+.+.+|++++++++||||+++++++..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--- 94 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHN--- 94 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETT---
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecC---
Confidence 468999999999999999999998899999999986433211 1678999999999999999999998532
Q ss_pred cCCceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCC--ceeccCCCCCeeec
Q 045798 756 QGNDFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEP--ILHCDLKPSNILLD 833 (1008)
Q Consensus 756 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~--ivH~Dlkp~NIll~ 833 (1008)
. .++||||+++|+|.+++..... .+++..++.++.|++.||+|||++ + |+||||||+||+++
T Consensus 95 --~--~~lv~e~~~~~~L~~~l~~~~~---------~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~ 158 (287)
T 4f0f_A 95 --P--PRMVMEFVPCGDLYHRLLDKAH---------PIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQ 158 (287)
T ss_dssp --T--TEEEEECCTTCBHHHHHHCTTS---------CCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEES
T ss_pred --C--CeEEEEecCCCCHHHHHhcccC---------CccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEe
Confidence 2 2699999999999988865432 689999999999999999999998 7 99999999999998
Q ss_pred CCCC-----eEEcccCcccccccccCccccccccccccccccCccccC--CCCCCcccchhhHHHHHHHHHhCCCCCCcc
Q 045798 834 NDLS-----GHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGL--GSEVSTNGDVYSYGILLLEMVTAKKPTDVM 906 (1008)
Q Consensus 834 ~~~~-----~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~sDvwslG~vl~elltG~~pf~~~ 906 (1008)
.++. +||+|||+++..... .....||+.|+|||++. ...++.++|||||||++|||++|+.||...
T Consensus 159 ~~~~~~~~~~kl~Dfg~~~~~~~~-------~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~ 231 (287)
T 4f0f_A 159 SLDENAPVCAKVADFGLSQQSVHS-------VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEY 231 (287)
T ss_dssp CCCTTCSCCEEECCCTTCBCCSSC-------EECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred ccCCCCceeEEeCCCCcccccccc-------ccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccc
Confidence 8776 999999999744321 12345899999999984 456789999999999999999999999743
Q ss_pred ccCCccHHHHHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 907 FEGDLNLHNFARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
............... . ... ....++..+.+++.+||+.||++|||++|+++
T Consensus 232 ~~~~~~~~~~~~~~~-----------~----------------~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 282 (287)
T 4f0f_A 232 SYGKIKFINMIREEG-----------L----------------RPT--IPEDCPPRLRNVIELCWSGDPKKRPHFSYIVK 282 (287)
T ss_dssp CCCHHHHHHHHHHSC-----------C----------------CCC--CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred cccHHHHHHHHhccC-----------C----------------CCC--CCcccCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 222111111111000 0 000 00123556899999999999999999999999
Q ss_pred HHHHH
Q 045798 987 ELQSV 991 (1008)
Q Consensus 987 ~L~~i 991 (1008)
.|+++
T Consensus 283 ~L~~l 287 (287)
T 4f0f_A 283 ELSEL 287 (287)
T ss_dssp HHHTC
T ss_pred HHHhC
Confidence 99763
No 93
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=2.2e-39 Score=356.37 Aligned_cols=246 Identities=25% Similarity=0.323 Sum_probs=202.3
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEecccc---chhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCc
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQC---EGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGND 759 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 759 (1008)
.++|++.+.||+|+||.||+|+...+|+.||+|+++... ....+.+.+|+.+++.++||||+++++++ .+.+
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~-----~~~~ 79 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTF-----QDAQ 79 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEE-----ECSS
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEE-----EeCC
Confidence 467999999999999999999999899999999997432 23456788999999999999999999994 5667
Q ss_pred eEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeE
Q 045798 760 FKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGH 839 (1008)
Q Consensus 760 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 839 (1008)
..|+||||+++|+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+|
T Consensus 80 ~~~lv~e~~~gg~L~~~l~~~~----------~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~k 146 (318)
T 1fot_A 80 QIFMIMDYIEGGELFSLLRKSQ----------RFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIK 146 (318)
T ss_dssp EEEEEECCCCSCBHHHHHHHTS----------SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEE
T ss_pred EEEEEEeCCCCCCHHHHHHHcC----------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEE
Confidence 8999999999999999997654 689999999999999999999998 999999999999999999999
Q ss_pred EcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHHh
Q 045798 840 IGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFARM 919 (1008)
Q Consensus 840 L~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~~ 919 (1008)
|+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||..... ...+
T Consensus 147 L~Dfg~a~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~----~~~~--- 212 (318)
T 1fot_A 147 ITDFGFAKYVPDV-------TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT----MKTY--- 212 (318)
T ss_dssp ECCCSSCEECSSC-------BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH----HHHH---
T ss_pred EeecCcceecCCc-------cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH----HHHH---
Confidence 9999999865432 1234699999999999999999999999999999999999999864211 0000
Q ss_pred hCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCC-----CHHHHHH
Q 045798 920 ALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRM-----NMTNVVH 986 (1008)
Q Consensus 920 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~evl~ 986 (1008)
..+..... .++. ..+.++.+++.+|++.||++|| +++|+++
T Consensus 213 ------~~i~~~~~--------------~~p~------~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 213 ------EKILNAEL--------------RFPP------FFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp ------HHHHHCCC--------------CCCT------TSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred ------HHHHhCCC--------------CCCC------CCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 00000000 0010 1234578999999999999999 8888875
No 94
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=2.4e-39 Score=374.56 Aligned_cols=254 Identities=26% Similarity=0.387 Sum_probs=205.2
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCceEE
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 762 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 762 (1008)
.++|++.+.||+|+||.||+|.+ .++.||||+++... ..+.+.+|++++++++||||++++++|. ......+
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~--~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~----~~~~~~~ 263 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIV----EEKGGLY 263 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEE----CTTSCEE
T ss_pred hHHeEEEeeecCcCCeeEEEEEe--cCCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEE----cCCCceE
Confidence 46788999999999999999998 47899999997543 4578999999999999999999999864 3344689
Q ss_pred EEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeEEcc
Q 045798 763 IVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGHIGD 842 (1008)
Q Consensus 763 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 842 (1008)
+||||+++|+|.+++...... .+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 264 iv~e~~~~g~L~~~l~~~~~~--------~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~D 332 (450)
T 1k9a_A 264 IVTEYMAKGSLVDYLRSRGRS--------VLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSD 332 (450)
T ss_dssp EEEECCTTCBHHHHHHHHCTT--------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECC
T ss_pred EEEEecCCCcHHHHHHhcCCC--------CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEee
Confidence 999999999999999764321 478999999999999999999998 999999999999999999999999
Q ss_pred cCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHh-CCCCCCccccCCccHHHHHHhhC
Q 045798 843 FGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVT-AKKPTDVMFEGDLNLHNFARMAL 921 (1008)
Q Consensus 843 fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-G~~pf~~~~~~~~~~~~~~~~~~ 921 (1008)
||+++...... ....++..|+|||++.+..++.++|||||||++|||++ |+.||......+ ......
T Consensus 333 fG~a~~~~~~~-------~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~--~~~~i~--- 400 (450)
T 1k9a_A 333 FGLTKEASSTQ-------DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--VVPRVE--- 400 (450)
T ss_dssp CTTCEECC-------------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT--HHHHHH---
T ss_pred CCCcccccccc-------cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHH---
Confidence 99998543221 11247889999999999999999999999999999998 999986432111 000000
Q ss_pred CcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHHHHHHHHH
Q 045798 922 PNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHELQSVKNI 994 (1008)
Q Consensus 922 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~i~~~ 994 (1008)
... +++ ....++.++.++|.+||+.||++|||+.|+++.|+.+...
T Consensus 401 ---------~~~--------------~~~----~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 401 ---------KGY--------------KMD----APDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp ---------TTC--------------CCC----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred ---------cCC--------------CCC----CCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence 000 000 0113456789999999999999999999999999998754
No 95
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=2.9e-39 Score=361.10 Aligned_cols=252 Identities=21% Similarity=0.265 Sum_probs=189.2
Q ss_pred HhcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCceE
Q 045798 682 ATNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDFK 761 (1008)
Q Consensus 682 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 761 (1008)
..++|++.+.||+|+||.||+|.+..+++.||||+++... ..+.+.+|++++++++||||+++++++ ..++..
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~-----~~~~~~ 123 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIF-----ETPTEI 123 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEE-----ECSSEE
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeE-----ecCCeE
Confidence 3568999999999999999999999889999999997542 346788999999999999999999995 456679
Q ss_pred EEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecC---CCCe
Q 045798 762 AIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDN---DLSG 838 (1008)
Q Consensus 762 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~ 838 (1008)
++||||+++|+|.+++.... .+++.+++.++.||+.||+|||+. +|+||||||+||+++. ++.+
T Consensus 124 ~lv~e~~~~~~L~~~l~~~~----------~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~ 190 (349)
T 2w4o_A 124 SLVLELVTGGELFDRIVEKG----------YYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPL 190 (349)
T ss_dssp EEEECCCCSCBHHHHHTTCS----------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCE
T ss_pred EEEEEeCCCCCHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCE
Confidence 99999999999999997654 689999999999999999999998 9999999999999975 8899
Q ss_pred EEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHH
Q 045798 839 HIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFAR 918 (1008)
Q Consensus 839 kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~ 918 (1008)
||+|||+++....... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...............
T Consensus 191 kl~Dfg~a~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~ 265 (349)
T 2w4o_A 191 KIADFGLSKIVEHQVL-----MKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILN 265 (349)
T ss_dssp EECCCC---------------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHT
T ss_pred EEccCccccccCcccc-----cccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHh
Confidence 9999999986543221 12345899999999999999999999999999999999999998643221111111110
Q ss_pred hhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 919 MALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 919 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
.... .. .+.....+.++.+++.+||+.||++|||+.|+++
T Consensus 266 ~~~~-----~~-----------------------~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 266 CEYY-----FI-----------------------SPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp TCCC-----CC-----------------------TTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred CCCc-----cC-----------------------CchhhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0000 00 0001123456789999999999999999999986
No 96
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=8.4e-39 Score=370.25 Aligned_cols=282 Identities=20% Similarity=0.154 Sum_probs=201.5
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccc--cchhhHHHHHHHHHHhhcCCCCceeeeeccccccc-cCCc
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQ--CEGASKSFMAECKALKNIRHRNLVKVITSCSSIDF-QGND 759 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~~ 759 (1008)
.++|++.+.||+|+||.||+|.+..+++.||||++... .....+++.+|+.+++.++||||+++++++..... ....
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 57899999999999999999999999999999999743 33446788999999999999999999999754321 3446
Q ss_pred eEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeE
Q 045798 760 FKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGH 839 (1008)
Q Consensus 760 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 839 (1008)
..|+||||+++ ++.+.+.. .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+|
T Consensus 141 ~~~lv~E~~~~-~l~~~~~~------------~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~k 204 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQM------------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLK 204 (464)
T ss_dssp EEEEEEECCSE-EHHHHHTS------------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEE
T ss_pred eEEEEEeCCCC-CHHHHHhh------------cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEE
Confidence 78999999965 56666632 578899999999999999999998 999999999999999999999
Q ss_pred EcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHHh
Q 045798 840 IGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFARM 919 (1008)
Q Consensus 840 L~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~~ 919 (1008)
|+|||+|+....... .....||+.|+|||++.+..++.++||||+||++|||++|+.||...... ..+......
T Consensus 205 l~DFG~a~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~-~~~~~i~~~ 278 (464)
T 3ttj_A 205 ILDFGLARTAGTSFM-----MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI-DQWNKVIEQ 278 (464)
T ss_dssp ECCCCCC-----CCC-----C----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHH
T ss_pred EEEEEeeeecCCCcc-----cCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHh
Confidence 999999986543221 22356899999999999999999999999999999999999999643211 111111111
Q ss_pred hCCcc----------hhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 920 ALPNQ----------VMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 920 ~~~~~----------~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
...+. ....+...-...............++.........+.++.+++.+||+.||++|||++|+++
T Consensus 279 lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 355 (464)
T 3ttj_A 279 LGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 355 (464)
T ss_dssp HCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 11110 00000000000000000000000011111122334677899999999999999999999986
No 97
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=9.3e-40 Score=362.81 Aligned_cols=284 Identities=22% Similarity=0.299 Sum_probs=213.7
Q ss_pred hcCCCCCceEeeccCeeEEEEE----EcCCCeEEEEEEeccccchhhHHHHHHHHHHhhcCCCCceeeeeccccccccCC
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGA----LDEDGIVVAIKVINLQCEGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGN 758 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~----~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 758 (1008)
.++|++.+.||+|+||.||+|+ ...+++.||||++........+.+.+|++++++++||||+++++++.. .+.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~~ 98 (327)
T 3lxl_A 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYG---PGR 98 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEC---SSS
T ss_pred hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEec---CCC
Confidence 3679999999999999999999 456889999999987766667789999999999999999999998642 456
Q ss_pred ceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCe
Q 045798 759 DFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSG 838 (1008)
Q Consensus 759 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 838 (1008)
...++||||+++++|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 99 ~~~~lv~e~~~~~~L~~~l~~~~---------~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~ 166 (327)
T 3lxl_A 99 QSLRLVMEYLPSGCLRDFLQRHR---------ARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHV 166 (327)
T ss_dssp CEEEEEEECCTTCBHHHHHHHHG---------GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEE
T ss_pred ceEEEEEeecCCCCHHHHHHhcc---------cCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCE
Confidence 67899999999999999997532 1689999999999999999999998 99999999999999999999
Q ss_pred EEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHH
Q 045798 839 HIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFAR 918 (1008)
Q Consensus 839 kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~ 918 (1008)
||+|||.++......... .......+|..|+|||++.+..++.++|||||||++|+|++|+.||....... ...+..
T Consensus 167 kl~Dfg~~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~--~~~~~~ 243 (327)
T 3lxl_A 167 KIADFGLAKLLPLDKDYY-VVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEF--LRMMGC 243 (327)
T ss_dssp EECCGGGCEECCTTCSEE-ECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHH--HHHCC-
T ss_pred EEcccccceecccCCccc-eeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchh--hhhccc
Confidence 999999998765433222 12233458889999999988889999999999999999999999976421110 000000
Q ss_pred hhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHHHHHHHHHHHHH
Q 045798 919 MALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHELQSVKNILLEL 998 (1008)
Q Consensus 919 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~i~~~~~~~ 998 (1008)
...........+. ...... .+....++..+.+++.+||+.||++|||++|+++.|+.+.......
T Consensus 244 ~~~~~~~~~~~~~-----------~~~~~~----~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~ 308 (327)
T 3lxl_A 244 ERDVPALSRLLEL-----------LEEGQR----LPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRGC 308 (327)
T ss_dssp ---CCHHHHHHHH-----------HHTTCC----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC-------
T ss_pred ccccccHHHHHHH-----------hhcccC----CCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhcCc
Confidence 0000000010000 000000 0011234567899999999999999999999999999987665444
Q ss_pred H
Q 045798 999 E 999 (1008)
Q Consensus 999 ~ 999 (1008)
.
T Consensus 309 ~ 309 (327)
T 3lxl_A 309 E 309 (327)
T ss_dssp -
T ss_pred c
Confidence 3
No 98
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=1.9e-39 Score=363.07 Aligned_cols=256 Identities=19% Similarity=0.263 Sum_probs=202.3
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEecccc-----chhhHHHHHHHHHHhhcCCCCceeeeeccccccccC
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQC-----EGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQG 757 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 757 (1008)
.++|++.+.||+|+||.||+|.+..+++.||||+++... ....+.+.+|+++++.++||||+++++++ ..
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~-----~~ 97 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETY-----SS 97 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEE-----EE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEE-----Ee
Confidence 357999999999999999999999899999999986321 12357799999999999999999999984 45
Q ss_pred CceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCC
Q 045798 758 NDFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLS 837 (1008)
Q Consensus 758 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 837 (1008)
++..|+||||+++++|.+++...... ...+++..+..++.||+.||+|||+. +|+||||||+||+++.++.
T Consensus 98 ~~~~~lv~e~~~g~~L~~~l~~~~~~------~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~ 168 (351)
T 3c0i_A 98 DGMLYMVFEFMDGADLCFEIVKRADA------GFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKEN 168 (351)
T ss_dssp TTEEEEEEECCSSCBHHHHHHHHHHT------TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSST
T ss_pred CCEEEEEEeCCCCCCHHHHHHHhccc------CCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCC
Confidence 67799999999999998887543211 11589999999999999999999998 9999999999999986654
Q ss_pred ---eEEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHH
Q 045798 838 ---GHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLH 914 (1008)
Q Consensus 838 ---~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~ 914 (1008)
+||+|||++......... .....||+.|+|||++.+..++.++|||||||++|+|++|+.||....+ ....
T Consensus 169 ~~~vkl~Dfg~a~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~~ 242 (351)
T 3c0i_A 169 SAPVKLGGFGVAIQLGESGLV----AGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE--RLFE 242 (351)
T ss_dssp TCCEEECCCTTCEECCTTSCB----CCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH--HHHH
T ss_pred CCcEEEecCcceeEecCCCee----ecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH--HHHH
Confidence 999999999866543211 2234699999999999999999999999999999999999999864211 0000
Q ss_pred HHHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 915 NFARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 915 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
.... ......+ ......+.++.+++.+||+.||++|||+.|+++
T Consensus 243 ~i~~------------~~~~~~~----------------~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 243 GIIK------------GKYKMNP----------------RQWSHISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp HHHH------------TCCCCCH----------------HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHc------------CCCCCCc----------------cccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 1100 0000000 001123556899999999999999999999986
No 99
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=5.3e-39 Score=353.46 Aligned_cols=278 Identities=24% Similarity=0.304 Sum_probs=200.7
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEecccc--chhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCce
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQC--EGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDF 760 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 760 (1008)
.++|++.+.||+|+||+||+|++. +++.||+|+++... ....+.+.+|++++++++||||+++++++ ..++.
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~~~ 93 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI-----HSERC 93 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEET-TSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEE-----CCSSC
T ss_pred HhhhHhhhhccCCCCeEEEEEEEC-CCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEE-----ccCCE
Confidence 578999999999999999999995 68999999997442 23346789999999999999999999994 55677
Q ss_pred EEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeEE
Q 045798 761 KAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGHI 840 (1008)
Q Consensus 761 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 840 (1008)
.++||||++ ++|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 94 ~~lv~e~~~-~~l~~~~~~~~~---------~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl 160 (311)
T 3niz_A 94 LTLVFEFME-KDLKKVLDENKT---------GLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKL 160 (311)
T ss_dssp EEEEEECCS-EEHHHHHHTCTT---------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEE
T ss_pred EEEEEcCCC-CCHHHHHHhccC---------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEE
Confidence 999999996 588888765432 589999999999999999999998 9999999999999999999999
Q ss_pred cccCcccccccccCccccccccccccccccCccccCC-CCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHHh
Q 045798 841 GDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLG-SEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFARM 919 (1008)
Q Consensus 841 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~~ 919 (1008)
+|||+++........ .....||+.|+|||++.+ ..++.++||||+||++|+|++|+.||......+. .......
T Consensus 161 ~Dfg~a~~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~i~~~ 235 (311)
T 3niz_A 161 ADFGLARAFGIPVRS----YTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQ-LPKIFSI 235 (311)
T ss_dssp CCCTTCEETTSCCC-------CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTH-HHHHHHH
T ss_pred ccCcCceecCCCccc----ccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHH
Confidence 999999865433221 223458999999999876 5689999999999999999999999975433222 2222211
Q ss_pred hCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 920 ALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 920 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
........+.. ....+......................+.++.+++.+||+.||++|||++|+++
T Consensus 236 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 236 LGTPNPREWPQ--VQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp HCCCCTTTSGG--GTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HCCCChHHhhh--hhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 11111000000 000000000000000000000001123456789999999999999999999986
No 100
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=3e-39 Score=363.98 Aligned_cols=211 Identities=27% Similarity=0.354 Sum_probs=182.0
Q ss_pred cCCCCCHHHHHHHhcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhhcC-----CCCce
Q 045798 670 ALPKMSYKSLLKATNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKNIR-----HRNLV 744 (1008)
Q Consensus 670 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----h~niv 744 (1008)
....+++.+.....++|++.++||+|+||.||+|++..+++.||||+++.. ....+.+..|+++++.+. ||||+
T Consensus 21 ~~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv 99 (360)
T 3llt_A 21 EIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIV 99 (360)
T ss_dssp GGGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBC
T ss_pred cceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCee
Confidence 344566666666678999999999999999999999889999999999743 344567888999999996 99999
Q ss_pred eeeeccccccccCCceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceecc
Q 045798 745 KVITSCSSIDFQGNDFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCD 824 (1008)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~D 824 (1008)
++++++ ...+..++||||+ +++|.+++...... .+++..++.++.||+.||+|||+. +|+|||
T Consensus 100 ~~~~~~-----~~~~~~~lv~e~~-~~~L~~~~~~~~~~--------~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrD 162 (360)
T 3llt_A 100 KYHGKF-----MYYDHMCLIFEPL-GPSLYEIITRNNYN--------GFHIEDIKLYCIEILKALNYLRKM---SLTHTD 162 (360)
T ss_dssp CEEEEE-----EETTEEEEEECCC-CCBHHHHHHHTTTC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSC
T ss_pred ccccee-----eECCeeEEEEcCC-CCCHHHHHHhcCCC--------CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCC
Confidence 999985 4556799999999 99999999765422 589999999999999999999998 999999
Q ss_pred CCCCCeeecC-------------------------CCCeEEcccCcccccccccCccccccccccccccccCccccCCCC
Q 045798 825 LKPSNILLDN-------------------------DLSGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSE 879 (1008)
Q Consensus 825 lkp~NIll~~-------------------------~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 879 (1008)
|||+|||++. ++.+||+|||+|+...... ....||+.|+|||++.+..
T Consensus 163 lkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~-------~~~~gt~~y~aPE~~~~~~ 235 (360)
T 3llt_A 163 LKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYH-------GSIINTRQYRAPEVILNLG 235 (360)
T ss_dssp CSGGGEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCC-------CSCCSCGGGCCHHHHTTCC
T ss_pred CCcccEEEccccccccccchhcccccccccccccCCCCEEEEeccCceecCCCC-------cCccCcccccCcHHHcCCC
Confidence 9999999975 7899999999998543322 2345899999999999999
Q ss_pred CCcccchhhHHHHHHHHHhCCCCCCc
Q 045798 880 VSTNGDVYSYGILLLEMVTAKKPTDV 905 (1008)
Q Consensus 880 ~~~~sDvwslG~vl~elltG~~pf~~ 905 (1008)
++.++|||||||++|||++|+.||..
T Consensus 236 ~~~~~DiwslG~il~ell~g~~pf~~ 261 (360)
T 3llt_A 236 WDVSSDMWSFGCVLAELYTGSLLFRT 261 (360)
T ss_dssp CCTTHHHHHHHHHHHHHHHSSCSCCC
T ss_pred CCCccchHHHHHHHHHHHHCCCCCCC
Confidence 99999999999999999999999964
No 101
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=1.1e-39 Score=362.41 Aligned_cols=250 Identities=26% Similarity=0.354 Sum_probs=201.5
Q ss_pred HHhcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEecccc---chhhHHHHHHHHHHhhc-CCCCceeeeecccccccc
Q 045798 681 KATNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQC---EGASKSFMAECKALKNI-RHRNLVKVITSCSSIDFQ 756 (1008)
Q Consensus 681 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 756 (1008)
...++|.+.+.||+|+||.||+|+++.+++.||+|+++... ....+.+..|.+++..+ +||||++++++ +.
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~-----~~ 88 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCT-----FQ 88 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEE-----EE
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEE-----EE
Confidence 35678999999999999999999999899999999997432 23456788999999887 99999999998 45
Q ss_pred CCceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCC
Q 045798 757 GNDFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDL 836 (1008)
Q Consensus 757 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 836 (1008)
+.+..|+||||+++|+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+||+++.++
T Consensus 89 ~~~~~~lv~E~~~gg~L~~~l~~~~----------~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g 155 (345)
T 1xjd_A 89 TKENLFFVMEYLNGGDLMYHIQSCH----------KFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDG 155 (345)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHHHS----------SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTS
T ss_pred eCCEEEEEEeCCCCCcHHHHHHHcC----------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCC
Confidence 6678999999999999999997543 689999999999999999999998 999999999999999999
Q ss_pred CeEEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHH
Q 045798 837 SGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNF 916 (1008)
Q Consensus 837 ~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~ 916 (1008)
.+||+|||+++....... ......||+.|+|||++.+..++.++||||+||++|||++|+.||...... .....
T Consensus 156 ~vkL~DFG~a~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--~~~~~ 229 (345)
T 1xjd_A 156 HIKIADFGMCKENMLGDA----KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE--ELFHS 229 (345)
T ss_dssp CEEECCCTTCBCCCCTTC----CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHH
T ss_pred CEEEeEChhhhhcccCCC----cccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHH--HHHHH
Confidence 999999999985432221 123456999999999999999999999999999999999999998642110 00000
Q ss_pred HHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHH-HHH
Q 045798 917 ARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMT-NVV 985 (1008)
Q Consensus 917 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~-evl 985 (1008)
.... . ..++ ...+.++.+++.+||+.||++||++. |++
T Consensus 230 i~~~---------------~----------~~~p------~~~s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 230 IRMD---------------N----------PFYP------RWLEKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp HHHC---------------C----------CCCC------TTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred HHhC---------------C----------CCCC------cccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 0000 0 0000 01234578999999999999999997 664
No 102
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=8.4e-39 Score=356.33 Aligned_cols=260 Identities=24% Similarity=0.329 Sum_probs=201.2
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEecccc-chhhHHHHHHHHHHhhcCCCCceeeeeccccccc------
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQC-EGASKSFMAECKALKNIRHRNLVKVITSCSSIDF------ 755 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~------ 755 (1008)
.++|++.+.||+|+||.||+|++..+++.||||+++... +...+.+.+|++++++++||||+++++++.....
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 457999999999999999999998899999999997543 3456789999999999999999999998743211
Q ss_pred ----------------------------------------------cCCceEEEEEeccCCCChhcccccCCCCCCCccc
Q 045798 756 ----------------------------------------------QGNDFKAIVYEYMPNGSLEKWLHPHAVPKRDKEI 789 (1008)
Q Consensus 756 ----------------------------------------------~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~ 789 (1008)
....+.++||||+++++|.+++......
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~------ 158 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSL------ 158 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSG------
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCc------
Confidence 1223489999999999999999865432
Q ss_pred ccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeEEcccCcccccccccCcc--------ccccc
Q 045798 790 EIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGHIGDFGLARFHQEVSNST--------LSSSV 861 (1008)
Q Consensus 790 ~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~--------~~~~~ 861 (1008)
...++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++......... .....
T Consensus 159 -~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~ 234 (332)
T 3qd2_B 159 -EDREHGVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHT 234 (332)
T ss_dssp -GGSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCC
T ss_pred -cchhhHHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhcccccccccccccc
Confidence 1567778999999999999999998 99999999999999999999999999998765442211 11223
Q ss_pred cccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCcchhhhhcccccCchHHhh
Q 045798 862 GVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFARMALPNQVMDIVDPILRNDEEILA 941 (1008)
Q Consensus 862 ~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 941 (1008)
...||+.|+|||++.+..++.++|||||||++|||++|..|+..... ... .......
T Consensus 235 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~~-------~~~--------~~~~~~~-------- 291 (332)
T 3qd2_B 235 GQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVR-------IIT--------DVRNLKF-------- 291 (332)
T ss_dssp SCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHHH-------HHH--------HHHTTCC--------
T ss_pred ccCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHHH-------HHH--------HhhccCC--------
Confidence 45699999999999999999999999999999999998777421100 000 0000000
Q ss_pred hhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 942 STDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 942 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
.......+.++.+++.+||+.||++|||++|+++
T Consensus 292 -----------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 292 -----------PLLFTQKYPQEHMMVQDMLSPSPTERPEATDIIE 325 (332)
T ss_dssp -----------CHHHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHH
T ss_pred -----------CcccccCChhHHHHHHHHccCCCCcCCCHHHHhh
Confidence 0011234556789999999999999999999986
No 103
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.7e-39 Score=354.18 Aligned_cols=258 Identities=28% Similarity=0.377 Sum_probs=199.0
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCceEE
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 762 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 762 (1008)
.++|++.+.||+|+||.||+|.+ .++.||+|++... ...+.+.+|++++++++||||+++++++. +..+
T Consensus 7 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-------~~~~ 75 (307)
T 2eva_A 7 YKEIEVEEVVGRGAFGVVCKAKW--RAKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACL-------NPVC 75 (307)
T ss_dssp GGGEEEEEEEECCSSSEEEEEEE--TTEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCT-------TTTE
T ss_pred HhHeeeeeEeecCCCceEEEEEE--CCeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEc-------CCcE
Confidence 35788999999999999999998 4789999998643 44578999999999999999999999854 2368
Q ss_pred EEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCC-eEEc
Q 045798 763 IVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLS-GHIG 841 (1008)
Q Consensus 763 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~-~kL~ 841 (1008)
+||||+++|+|.+++...... ..+++..++.++.|+++||+|||+...++|+||||||+||+++.++. +||+
T Consensus 76 lv~e~~~~~~L~~~l~~~~~~-------~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~ 148 (307)
T 2eva_A 76 LVMEYAEGGSLYNVLHGAEPL-------PYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKIC 148 (307)
T ss_dssp EEEECCTTCBHHHHHHCSSSE-------ECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEEC
T ss_pred EEEEcCCCCCHHHHHhccCCC-------CccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEc
Confidence 999999999999999765321 14788999999999999999999943349999999999999998886 7999
Q ss_pred ccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHHhhC
Q 045798 842 DFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFARMAL 921 (1008)
Q Consensus 842 Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~~~~ 921 (1008)
|||.+....... ....||+.|+|||++.+..++.++|||||||++|||++|+.||..................
T Consensus 149 Dfg~~~~~~~~~-------~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~ 221 (307)
T 2eva_A 149 DFGTACDIQTHM-------TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGT 221 (307)
T ss_dssp CCCC-------------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTC
T ss_pred cccccccccccc-------ccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCC
Confidence 999997553321 1234899999999999999999999999999999999999998643221111100000000
Q ss_pred CcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHHHHHHHHHH
Q 045798 922 PNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHELQSVKNIL 995 (1008)
Q Consensus 922 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~i~~~~ 995 (1008)
.. . ....++..+.+++.+||+.||++|||++|+++.|+.+....
T Consensus 222 ~~----------------------------~--~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 265 (307)
T 2eva_A 222 RP----------------------------P--LIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYF 265 (307)
T ss_dssp CC----------------------------C--CBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGC
T ss_pred CC----------------------------C--cccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhc
Confidence 00 0 00123456789999999999999999999999999876543
No 104
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=2.3e-39 Score=356.46 Aligned_cols=282 Identities=25% Similarity=0.283 Sum_probs=203.7
Q ss_pred HhcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEecccc-----chhhHHHHHHHHHHhhc---CCCCceeeeeccccc
Q 045798 682 ATNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQC-----EGASKSFMAECKALKNI---RHRNLVKVITSCSSI 753 (1008)
Q Consensus 682 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l---~h~niv~~~~~~~~~ 753 (1008)
..++|++.+.||+|+||+||+|++..+++.||||+++... ......+.+|+++++++ +||||++++++|...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 3678999999999999999999998899999999987432 12235677888887777 499999999997654
Q ss_pred cccCCceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeec
Q 045798 754 DFQGNDFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLD 833 (1008)
Q Consensus 754 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~ 833 (1008)
........++||||++ ++|.+++...... .+++..++.++.||+.||+|||+. +|+||||||+||+++
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~--------~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~ 154 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPP--------GLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVT 154 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCTT--------CSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEEC
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccCC--------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEc
Confidence 4333446899999995 6999999765422 489999999999999999999998 999999999999999
Q ss_pred CCCCeEEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccH
Q 045798 834 NDLSGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNL 913 (1008)
Q Consensus 834 ~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~ 913 (1008)
.++.+||+|||.++........ ....||+.|+|||++.+..++.++|||||||++|||++|+.||......+. .
T Consensus 155 ~~~~~kl~Dfg~a~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~-~ 228 (308)
T 3g33_A 155 SGGTVKLADFGLARIYSYQMAL-----TPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQ-L 228 (308)
T ss_dssp TTSCEEECSCSCTTTSTTCCCS-----GGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHH-H
T ss_pred CCCCEEEeeCccccccCCCccc-----CCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHH-H
Confidence 9999999999999865433221 234589999999999999999999999999999999999999864322211 1
Q ss_pred HHHHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 914 HNFARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 914 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
..............+.. ....... ... ............+.+.++.+++.+||+.||++|||+.|+++
T Consensus 229 ~~i~~~~~~~~~~~~~~-~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 229 GKIFDLIGLPPEDDWPR-DVSLPRG---AFP-PRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp HHHHHHHCCCCTTTSCS-SCSSCGG---GSC-CCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHHHhCCCChhhccc-hhhcccc---ccC-CCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 11111111000000000 0000000 000 00000000001134566899999999999999999999986
No 105
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=8.6e-41 Score=367.24 Aligned_cols=270 Identities=26% Similarity=0.351 Sum_probs=189.2
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhh--cCCCCceeeeeccccccccCCce
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKN--IRHRNLVKVITSCSSIDFQGNDF 760 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~~~~~~~~~~~~~~~~ 760 (1008)
.++|++.+.||+|+||.||+|.+ +++.||||+++.. ....+.+|.+++.. ++||||+++++++.... .....
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~-~~~~~ 75 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDN-GTWTQ 75 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-C--TTSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEEC-SSSEE
T ss_pred cceeeehhhccCCCCeEEEEEEE--cCcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCC-Cccce
Confidence 36799999999999999999987 5889999998643 34567788888887 79999999999965422 11236
Q ss_pred EEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHh--------hCCCCCceeccCCCCCeee
Q 045798 761 KAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLH--------HHCQEPILHCDLKPSNILL 832 (1008)
Q Consensus 761 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH--------~~~~~~ivH~Dlkp~NIll 832 (1008)
.++||||+++|+|.+++... .+++..++.++.|++.||+||| +. +|+||||||+||++
T Consensus 76 ~~lv~e~~~~g~L~~~l~~~-----------~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~ 141 (303)
T 3gxj_A 76 LWLVSDYHEHGSLFDYLNRY-----------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILV 141 (303)
T ss_dssp EEEEEECCTTCCHHHHHHHC-----------CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-C
T ss_pred eEEEEeccCCCCHHHHHhcc-----------CcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEE
Confidence 89999999999999999654 5778889999999999999999 65 99999999999999
Q ss_pred cCCCCeEEcccCcccccccccCccccccccccccccccCccccCCC------CCCcccchhhHHHHHHHHHhCCC-----
Q 045798 833 DNDLSGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGS------EVSTNGDVYSYGILLLEMVTAKK----- 901 (1008)
Q Consensus 833 ~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~sDvwslG~vl~elltG~~----- 901 (1008)
+.++.+||+|||+++.................||+.|+|||++.+. .++.++|||||||++|||++|..
T Consensus 142 ~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~ 221 (303)
T 3gxj_A 142 KKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIH 221 (303)
T ss_dssp CTTCCC-BCCCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC
T ss_pred CCCCCEEEeecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCcccc
Confidence 9999999999999986655443322223334699999999998776 44578999999999999999944
Q ss_pred -----CCCccccCCccHHHHHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCC
Q 045798 902 -----PTDVMFEGDLNLHNFARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQ 976 (1008)
Q Consensus 902 -----pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~ 976 (1008)
||............. ........+.... +......+++..+.+++.+||+.||+
T Consensus 222 ~~~~~p~~~~~~~~~~~~~~--------~~~~~~~~~~~~~-------------~~~~~~~~~~~~l~~li~~cl~~dP~ 280 (303)
T 3gxj_A 222 EDYQLPYYDLVPSDPSVEEM--------RKVVCEQKLRPNI-------------PNRWQSCEALRVMAKIMRECWYANGA 280 (303)
T ss_dssp -CCCCTTTTTCC-CCCCC-C--------HHHHTTSCCCCCC-------------CGGGGSSHHHHHHHHHHHTTCCSSGG
T ss_pred ceeeccccccCCCCccHHHH--------HHHHHHhhcCCCc-------------cccccchhhHHHHHHHHHHHhccCcc
Confidence 443221111110000 0111111111110 00011235677899999999999999
Q ss_pred CCCCHHHHHHHHHHHHH
Q 045798 977 DRMNMTNVVHELQSVKN 993 (1008)
Q Consensus 977 ~RPt~~evl~~L~~i~~ 993 (1008)
+|||++||++.|+++..
T Consensus 281 ~Rps~~~i~~~L~~l~~ 297 (303)
T 3gxj_A 281 ARLTALRIKKTLSQLSQ 297 (303)
T ss_dssp GSCCHHHHHHHHHC-CC
T ss_pred cCCCHHHHHHHHHHhhh
Confidence 99999999999988754
No 106
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=3.9e-39 Score=360.96 Aligned_cols=271 Identities=20% Similarity=0.260 Sum_probs=204.0
Q ss_pred HHHHhcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccc-----cchhhHHHHHHHHHHhhcCCCCceeeeeccccc
Q 045798 679 LLKATNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQ-----CEGASKSFMAECKALKNIRHRNLVKVITSCSSI 753 (1008)
Q Consensus 679 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 753 (1008)
+....++|++.+.||+|+||.||+|.+..+++.||+|++... .....+.+.+|++++++++||||+++++++
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~--- 97 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVY--- 97 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEE---
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhh---
Confidence 445577899999999999999999999989999999998643 234557899999999999999999999995
Q ss_pred cccCCceEEEEEeccCCCChhcccccCCCCCC------------------------------CcccccccCHHHHHHHHH
Q 045798 754 DFQGNDFKAIVYEYMPNGSLEKWLHPHAVPKR------------------------------DKEIEIKLTLLQRISIAI 803 (1008)
Q Consensus 754 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~------------------------------~~~~~~~l~~~~~~~i~~ 803 (1008)
.+++..++||||+++|+|.+++........ .......+++..++.++.
T Consensus 98 --~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 175 (345)
T 3hko_A 98 --EDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMR 175 (345)
T ss_dssp --ECSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHH
T ss_pred --ccCCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHH
Confidence 556779999999999999999863211100 000122457888999999
Q ss_pred HHHHHHHHHhhCCCCCceeccCCCCCeeecCCC--CeEEcccCcccccccccCccccccccccccccccCccccCC--CC
Q 045798 804 DVASALDYLHHHCQEPILHCDLKPSNILLDNDL--SGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLG--SE 879 (1008)
Q Consensus 804 qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~--~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~ 879 (1008)
||+.||+|||+. +|+||||||+||+++.++ .+||+|||+++.................||+.|+|||++.+ ..
T Consensus 176 qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~ 252 (345)
T 3hko_A 176 QIFSALHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNES 252 (345)
T ss_dssp HHHHHHHHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSC
T ss_pred HHHHHHHHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCC
Confidence 999999999998 999999999999998776 89999999998665433333223344569999999999875 67
Q ss_pred CCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHH
Q 045798 880 VSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLEC 959 (1008)
Q Consensus 880 ~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 959 (1008)
++.++|||||||++|||++|+.||......+. ... ........ ..+.....
T Consensus 253 ~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-~~~------------~~~~~~~~----------------~~~~~~~~ 303 (345)
T 3hko_A 253 YGPKCDAWSAGVLLHLLLMGAVPFPGVNDADT-ISQ------------VLNKKLCF----------------ENPNYNVL 303 (345)
T ss_dssp CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHH------------HHHCCCCT----------------TSGGGGGS
T ss_pred CCcHHHHHHHHHHHHHHHHCCCCCCCCChHHH-HHH------------HHhccccc----------------CCcccccC
Confidence 89999999999999999999999864321110 000 01100000 00011123
Q ss_pred HHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 960 LISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 960 ~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
+..+.+++.+||+.||.+|||+.|+++
T Consensus 304 ~~~~~~li~~~l~~~p~~Rps~~~~l~ 330 (345)
T 3hko_A 304 SPLARDLLSNLLNRNVDERFDAMRALQ 330 (345)
T ss_dssp CHHHHHHHHHHSCSCTTTSCCHHHHHH
T ss_pred CHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 456889999999999999999999986
No 107
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=1.5e-38 Score=355.82 Aligned_cols=275 Identities=25% Similarity=0.343 Sum_probs=210.4
Q ss_pred HHHHhcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhh--cCCCCceeeeecccccccc
Q 045798 679 LLKATNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKN--IRHRNLVKVITSCSSIDFQ 756 (1008)
Q Consensus 679 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~~~~~~~~~~~~ 756 (1008)
-....++|++.+.||+|+||.||+|.+ +++.||||+++.. ....+.+|++++.. ++||||+++++++.... .
T Consensus 37 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~-~ 110 (342)
T 1b6c_B 37 QRTIARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDN-G 110 (342)
T ss_dssp HHHHHHHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCC-S
T ss_pred cccccccEEEEeeecCCCCcEEEEEEE--cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccC-C
Confidence 344567899999999999999999998 5899999999643 34667889999887 69999999999964321 1
Q ss_pred CCceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHh--------hCCCCCceeccCCCC
Q 045798 757 GNDFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLH--------HHCQEPILHCDLKPS 828 (1008)
Q Consensus 757 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH--------~~~~~~ivH~Dlkp~ 828 (1008)
.....++||||+++|+|.+++... .+++.+++.++.|++.||+||| +. +|+||||||+
T Consensus 111 ~~~~~~lv~e~~~~g~L~~~l~~~-----------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~ 176 (342)
T 1b6c_B 111 TWTQLWLVSDYHEHGSLFDYLNRY-----------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSK 176 (342)
T ss_dssp SCCCEEEEECCCTTCBHHHHHHHC-----------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGG
T ss_pred ccceeEEEEeecCCCcHHHHHhcc-----------CccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHH
Confidence 113689999999999999999653 6899999999999999999999 65 9999999999
Q ss_pred CeeecCCCCeEEcccCcccccccccCccccccccccccccccCccccCCC------CCCcccchhhHHHHHHHHHhC---
Q 045798 829 NILLDNDLSGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGS------EVSTNGDVYSYGILLLEMVTA--- 899 (1008)
Q Consensus 829 NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~sDvwslG~vl~elltG--- 899 (1008)
||+++.++.+||+|||++..................||+.|+|||++.+. .++.++|||||||++|||++|
T Consensus 177 NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~ 256 (342)
T 1b6c_B 177 NILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSI 256 (342)
T ss_dssp GEEECTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCB
T ss_pred HEEECCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCc
Confidence 99999999999999999986654433222223345699999999998775 344789999999999999999
Q ss_pred -------CCCCCccccCCccHHHHHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccC
Q 045798 900 -------KKPTDVMFEGDLNLHNFARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSM 972 (1008)
Q Consensus 900 -------~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 972 (1008)
..||......+.....+....... .+.... + ......+++..+.+++.+||+
T Consensus 257 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~--------~~~~~~------------~-~~~~~~~~~~~l~~li~~cl~ 315 (342)
T 1b6c_B 257 GGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQ--------KLRPNI------------P-NRWQSCEALRVMAKIMRECWY 315 (342)
T ss_dssp TTBCCCCCCTTTTTSCSSCCHHHHHHHHTTS--------CCCCCC------------C-GGGGTSHHHHHHHHHHHHHCC
T ss_pred CCcccccccCccccCcCcccHHHHHHHHHHH--------HhCCCC------------c-ccccchhHHHHHHHHHHHHhc
Confidence 667654333322222222211110 000000 0 000123567789999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHHHH
Q 045798 973 ESPQDRMNMTNVVHELQSVKNI 994 (1008)
Q Consensus 973 ~dP~~RPt~~evl~~L~~i~~~ 994 (1008)
.||++|||+.||++.|+++.+.
T Consensus 316 ~dp~~Rps~~~i~~~L~~i~~~ 337 (342)
T 1b6c_B 316 ANGAARLTALRIKKTLSQLSQQ 337 (342)
T ss_dssp SSGGGSCCHHHHHHHHHHHHHT
T ss_pred cChhhCCCHHHHHHHHHHHHHH
Confidence 9999999999999999998654
No 108
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=6.1e-39 Score=351.44 Aligned_cols=264 Identities=23% Similarity=0.372 Sum_probs=204.5
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCC---CeEEEEEEecccc-chhhHHHHHHHHHHhhcCCCCceeeeeccccccccCC
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDED---GIVVAIKVINLQC-EGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGN 758 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~---~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 758 (1008)
..+|++.+.||+|+||.||+|.+..+ +..||+|+++... ....+.+.+|++++++++||||++++++|. ..+
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~----~~~ 99 (298)
T 3f66_A 24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICL----RSE 99 (298)
T ss_dssp GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEC----CSS
T ss_pred ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEE----cCC
Confidence 34688899999999999999997433 3468999987533 344578999999999999999999999863 445
Q ss_pred ceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCe
Q 045798 759 DFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSG 838 (1008)
Q Consensus 759 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 838 (1008)
+..++||||+++|+|.+++..... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+
T Consensus 100 ~~~~~v~e~~~~~~L~~~l~~~~~---------~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~ 167 (298)
T 3f66_A 100 GSPLVVLPYMKHGDLRNFIRNETH---------NPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTV 167 (298)
T ss_dssp SCCEEEEECCTTCBHHHHHHCTTC---------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCE
T ss_pred CceEEEEeCCCCCCHHHHHHhccc---------CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCE
Confidence 668999999999999999975432 678999999999999999999998 99999999999999999999
Q ss_pred EEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCC-CCCCccccCCccHHHHH
Q 045798 839 HIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAK-KPTDVMFEGDLNLHNFA 917 (1008)
Q Consensus 839 kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~-~pf~~~~~~~~~~~~~~ 917 (1008)
||+|||.++.................+|+.|+|||.+.+..++.++||||+|+++|||++|. +||...... .......
T Consensus 168 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~-~~~~~~~ 246 (298)
T 3f66_A 168 KVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF-DITVYLL 246 (298)
T ss_dssp EECSCGGGCCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTT-THHHHHH
T ss_pred EECcccccccccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHH-HHHHHHh
Confidence 99999999876554433333334456788999999998889999999999999999999954 555432111 1111110
Q ss_pred HhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHHHHHHHHH
Q 045798 918 RMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHELQSVKNI 994 (1008)
Q Consensus 918 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~i~~~ 994 (1008)
..... . ....++..+.+++.+||+.||++|||++|+++.|+++...
T Consensus 247 ~~~~~------------~-------------------~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~ 292 (298)
T 3f66_A 247 QGRRL------------L-------------------QPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST 292 (298)
T ss_dssp TTCCC------------C-------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred cCCCC------------C-------------------CCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 00000 0 0011344688999999999999999999999999988664
No 109
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=1.9e-39 Score=350.13 Aligned_cols=254 Identities=27% Similarity=0.415 Sum_probs=192.1
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccc----hhhHHHHHHHHHHhhcCCCCceeeeeccccccccCC
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCE----GASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGN 758 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 758 (1008)
.++|++.+.||+|+||.||+|.+ .++.||||+++.... ...+.+.+|+++++.++||||+++++++ ..+
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~ 78 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFW--IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVC-----LKE 78 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEE--TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEE-----CCC
T ss_pred hhheeeeeeeccCCCeEEEEEEE--cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEE-----ecC
Confidence 46799999999999999999998 488999999875432 2346789999999999999999999995 455
Q ss_pred ceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecC----
Q 045798 759 DFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDN---- 834 (1008)
Q Consensus 759 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~---- 834 (1008)
+..++||||+++++|.+++... ++++..++.++.|++.||+|||+....+|+||||||+||+++.
T Consensus 79 ~~~~lv~e~~~~~~L~~~~~~~-----------~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~ 147 (271)
T 3dtc_A 79 PNLCLVMEFARGGPLNRVLSGK-----------RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVEN 147 (271)
T ss_dssp --CEEEEECCTTEEHHHHHTSS-----------CCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSS
T ss_pred CceEEEEEcCCCCCHHHHhhcC-----------CCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEeccccc
Confidence 6689999999999999998643 6899999999999999999999981112999999999999986
Q ss_pred ----CCCeEEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCC
Q 045798 835 ----DLSGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGD 910 (1008)
Q Consensus 835 ----~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~ 910 (1008)
++.+||+|||.+......... ...||+.|+|||.+.+..++.++||||||+++|+|++|+.||.......
T Consensus 148 ~~~~~~~~kl~Dfg~~~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~ 221 (271)
T 3dtc_A 148 GDLSNKILKITDFGLAREWHRTTKM------SAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLA 221 (271)
T ss_dssp SCCSSCCEEECCCCC-------------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHH
T ss_pred ccccCcceEEccCCccccccccccc------CCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 778999999999865433221 2458999999999988889999999999999999999999986432110
Q ss_pred ccHHHHHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHHHHH
Q 045798 911 LNLHNFARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHELQS 990 (1008)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 990 (1008)
....... .... .+....++..+.+++.+||+.||.+|||+.|+++.|++
T Consensus 222 ----~~~~~~~---------~~~~------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~ 270 (271)
T 3dtc_A 222 ----VAYGVAM---------NKLA------------------LPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTT 270 (271)
T ss_dssp ----HHHHHHT---------SCCC------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC
T ss_pred ----HHHhhhc---------CCCC------------------CCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhc
Confidence 0000000 0000 00011234568999999999999999999999999976
Q ss_pred H
Q 045798 991 V 991 (1008)
Q Consensus 991 i 991 (1008)
+
T Consensus 271 l 271 (271)
T 3dtc_A 271 I 271 (271)
T ss_dssp -
T ss_pred C
Confidence 4
No 110
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=2.4e-39 Score=351.22 Aligned_cols=260 Identities=22% Similarity=0.334 Sum_probs=197.6
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcC---CCeEEEEEEecccc-chhhHHHHHHHHHHhhcCCCCceeeeeccccccccCC
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDE---DGIVVAIKVINLQC-EGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGN 758 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 758 (1008)
.++|++.+.||+|+||.||+|.+.. .+..||+|+++... ....+.+.+|+.++++++||||+++++++. +
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~------~ 87 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT------E 87 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC------S
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc------c
Confidence 5689999999999999999999854 35679999987543 344568999999999999999999999852 3
Q ss_pred ceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCe
Q 045798 759 DFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSG 838 (1008)
Q Consensus 759 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 838 (1008)
+..++||||+++++|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 88 ~~~~lv~e~~~~~~L~~~l~~~~~---------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~ 155 (281)
T 1mp8_A 88 NPVWIIMELCTLGELRSFLQVRKY---------SLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCV 155 (281)
T ss_dssp SSCEEEEECCTTEEHHHHHHHTTT---------TSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEE
T ss_pred CccEEEEecCCCCCHHHHHHhcCC---------CCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCE
Confidence 457999999999999999975431 689999999999999999999998 99999999999999999999
Q ss_pred EEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHh-CCCCCCccccCCccHHHHH
Q 045798 839 HIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVT-AKKPTDVMFEGDLNLHNFA 917 (1008)
Q Consensus 839 kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-G~~pf~~~~~~~~~~~~~~ 917 (1008)
||+|||+++......... .....+|+.|+|||++.+..++.++|||||||++|||++ |..||......+ .....
T Consensus 156 kl~Dfg~~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~--~~~~i 230 (281)
T 1mp8_A 156 KLGDFGLSRYMEDSTYYK---ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND--VIGRI 230 (281)
T ss_dssp EECC----------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--HHHHH
T ss_pred EECccccccccCcccccc---cccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHH--HHHHH
Confidence 999999998664432211 122346789999999988889999999999999999997 999986432211 00000
Q ss_pred HhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHHHHHHHHHH
Q 045798 918 RMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHELQSVKNIL 995 (1008)
Q Consensus 918 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~i~~~~ 995 (1008)
..... . . ....++..+.+++.+||+.||++|||+.|+++.|+++.+..
T Consensus 231 ~~~~~-----------~-------------~------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 278 (281)
T 1mp8_A 231 ENGER-----------L-------------P------MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 278 (281)
T ss_dssp HTTCC-----------C-------------C------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HcCCC-----------C-------------C------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 00000 0 0 00123456889999999999999999999999999987654
No 111
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=8e-40 Score=356.79 Aligned_cols=253 Identities=20% Similarity=0.343 Sum_probs=202.3
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCC-------eEEEEEEeccccchhhHHHHHHHHHHhhcCCCCceeeeeccccccc
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDG-------IVVAIKVINLQCEGASKSFMAECKALKNIRHRNLVKVITSCSSIDF 755 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~-------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 755 (1008)
.++|++.+.||+|+||.||+|.+..++ ..||+|++........+.+.+|++++++++||||+++++++
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~----- 81 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVC----- 81 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEE-----
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEE-----
Confidence 457899999999999999999997666 57999999876666778899999999999999999999995
Q ss_pred cCCceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCC
Q 045798 756 QGNDFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDND 835 (1008)
Q Consensus 756 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 835 (1008)
..++..++||||+++|+|.+++..... .+++..++.++.||+.||+|||+. +|+||||||+||+++.+
T Consensus 82 ~~~~~~~lv~e~~~~~~L~~~l~~~~~---------~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~ 149 (289)
T 4fvq_A 82 VCGDENILVQEFVKFGSLDTYLKKNKN---------CINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIRE 149 (289)
T ss_dssp CCTTCCEEEEECCTTCBHHHHHHHTGG---------GCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEEC
T ss_pred EeCCCCEEEEECCCCCCHHHHHHhCCC---------CCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecC
Confidence 445668999999999999999976531 489999999999999999999998 99999999999999988
Q ss_pred CC--------eEEcccCcccccccccCccccccccccccccccCccccCC-CCCCcccchhhHHHHHHHHHhCCCCCCcc
Q 045798 836 LS--------GHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLG-SEVSTNGDVYSYGILLLEMVTAKKPTDVM 906 (1008)
Q Consensus 836 ~~--------~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltG~~pf~~~ 906 (1008)
+. +||+|||.+....... ...+|+.|+|||++.+ ..++.++|||||||++|||++|..|+...
T Consensus 150 ~~~~~~~~~~~kl~Dfg~~~~~~~~~--------~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~ 221 (289)
T 4fvq_A 150 EDRKTGNPPFIKLSDPGISITVLPKD--------ILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSA 221 (289)
T ss_dssp CBGGGTBCCEEEECCCCSCTTTSCHH--------HHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred CcccccccceeeeccCcccccccCcc--------ccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccc
Confidence 87 9999999997543221 1347889999999887 67899999999999999999966554322
Q ss_pred ccCCccHHHHHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 907 FEGDLNLHNFARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
....... .... .. ...+. ..+.++.+++.+||+.||++|||++|+++
T Consensus 222 ~~~~~~~-~~~~--~~------------------------~~~~~------~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 268 (289)
T 4fvq_A 222 LDSQRKL-QFYE--DR------------------------HQLPA------PKAAELANLINNCMDYEPDHRPSFRAIIR 268 (289)
T ss_dssp SCHHHHH-HHHH--TT------------------------CCCCC------CSSCTTHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred cchHHHH-HHhh--cc------------------------CCCCC------CCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 1111000 0000 00 00000 01234689999999999999999999999
Q ss_pred HHHHHHH
Q 045798 987 ELQSVKN 993 (1008)
Q Consensus 987 ~L~~i~~ 993 (1008)
.|+++..
T Consensus 269 ~l~~l~~ 275 (289)
T 4fvq_A 269 DLNSLFT 275 (289)
T ss_dssp HHHTCC-
T ss_pred HHHHhcC
Confidence 9988754
No 112
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=2.9e-39 Score=352.02 Aligned_cols=260 Identities=30% Similarity=0.451 Sum_probs=194.9
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEecccc--chhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCce
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQC--EGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDF 760 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 760 (1008)
.++|++.+.||+|+||.||+|.+. ..||+|+++... ....+.+.+|++++++++||||+++++++ ....
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~---~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~------~~~~ 93 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS------TAPQ 93 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESS---SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE------CSSS
T ss_pred ccceeeeeEecCCCCeEEEEEEEc---CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec------cCCc
Confidence 568999999999999999999874 359999997543 34457899999999999999999999973 3345
Q ss_pred EEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeEE
Q 045798 761 KAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGHI 840 (1008)
Q Consensus 761 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 840 (1008)
.++||||+++++|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 94 ~~lv~e~~~~~~L~~~l~~~~~---------~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl 161 (289)
T 3og7_A 94 LAIVTQWCEGSSLYHHLHASET---------KFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKI 161 (289)
T ss_dssp CEEEEECCCEEEHHHHHTTC------------CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEE
T ss_pred cEEEEEecCCCcHHHHHhhccC---------CCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEE
Confidence 7999999999999999965432 689999999999999999999998 9999999999999999999999
Q ss_pred cccCcccccccccCccccccccccccccccCccccC---CCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHH
Q 045798 841 GDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGL---GSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFA 917 (1008)
Q Consensus 841 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~ 917 (1008)
+|||++.......... ......||+.|+|||++. +..++.++||||||+++|||++|+.||......+.......
T Consensus 162 ~Dfg~~~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~ 239 (289)
T 3og7_A 162 GDFGLATEKSRWSGSH--QFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVG 239 (289)
T ss_dssp CCCC--------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHH
T ss_pred ccceeccccccccccc--cccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhc
Confidence 9999998654322211 122345899999999986 56788899999999999999999999964322111111111
Q ss_pred HhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHHHHHHH
Q 045798 918 RMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHELQSVK 992 (1008)
Q Consensus 918 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~i~ 992 (1008)
.......... ....++.++.+++.+||+.||.+|||++|+++.|+++.
T Consensus 240 ~~~~~~~~~~---------------------------~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~ 287 (289)
T 3og7_A 240 RGSLSPDLSK---------------------------VRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELA 287 (289)
T ss_dssp HTSCCCCTTS---------------------------SCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred ccccCcchhh---------------------------ccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHh
Confidence 1111110000 01134567899999999999999999999999999864
No 113
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=4.3e-39 Score=349.79 Aligned_cols=259 Identities=25% Similarity=0.398 Sum_probs=205.4
Q ss_pred HhcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCceE
Q 045798 682 ATNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDFK 761 (1008)
Q Consensus 682 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 761 (1008)
..++|++.+.||+|+||.||+|.+. ++..||+|+++... ...+.+.+|++++++++||||+++++++ ..++..
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~~~ 94 (283)
T 3gen_A 22 DPKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVC-----TKQRPI 94 (283)
T ss_dssp CGGGEEEEEECC---CEEEEEEEET-TTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEE-----CSSSSE
T ss_pred CHHHHHhHhhcCCCCCceEEEEEEc-CCCeEEEEEecCCC-CCHHHHHHHHHHHhcCCCCCEeeEEEEE-----ecCCCe
Confidence 3568999999999999999999986 78899999997553 2346799999999999999999999995 456678
Q ss_pred EEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeEEc
Q 045798 762 AIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGHIG 841 (1008)
Q Consensus 762 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 841 (1008)
++||||+++++|.+++.... ..+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 95 ~lv~e~~~~~~L~~~l~~~~---------~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~ 162 (283)
T 3gen_A 95 FIITEYMANGCLLNYLREMR---------HRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVS 162 (283)
T ss_dssp EEEECCCTTCBHHHHHHCGG---------GCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEEC
T ss_pred EEEEeccCCCcHHHHHHHhc---------cCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEc
Confidence 99999999999999997532 1689999999999999999999998 99999999999999999999999
Q ss_pred ccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHh-CCCCCCccccCCccHHHHHHhh
Q 045798 842 DFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVT-AKKPTDVMFEGDLNLHNFARMA 920 (1008)
Q Consensus 842 Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-G~~pf~~~~~~~~~~~~~~~~~ 920 (1008)
|||.++....... .......+|+.|+|||++.+..++.++||||+|+++|||++ |+.||....... ......
T Consensus 163 Dfg~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~--~~~~~~-- 235 (283)
T 3gen_A 163 DFGLSRYVLDDEY---TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE--TAEHIA-- 235 (283)
T ss_dssp STTGGGGBCCHHH---HSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH--HHHHHH--
T ss_pred ccccccccccccc---ccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhH--HHHHHh--
Confidence 9999986543321 12223447888999999988889999999999999999998 999986432110 000000
Q ss_pred CCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHHHHHHHHH
Q 045798 921 LPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHELQSVKNI 994 (1008)
Q Consensus 921 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~i~~~ 994 (1008)
...... .....+..+.+++.+||+.||.+|||++|+++.|+++.+.
T Consensus 236 ----------~~~~~~------------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~ 281 (283)
T 3gen_A 236 ----------QGLRLY------------------RPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE 281 (283)
T ss_dssp ----------TTCCCC------------------CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ----------cccCCC------------------CCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhc
Confidence 000000 0001234678999999999999999999999999988754
No 114
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=1.2e-39 Score=369.51 Aligned_cols=259 Identities=20% Similarity=0.236 Sum_probs=204.7
Q ss_pred HHHHHHhcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEecccc---chhhHHHHHHHHHHhhcCCCCceeeeeccccc
Q 045798 677 KSLLKATNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQC---EGASKSFMAECKALKNIRHRNLVKVITSCSSI 753 (1008)
Q Consensus 677 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 753 (1008)
.++....++|++.+.||+|+||.||+|++..+++.||+|+++... ....+.+.+|+.+++.++||||+++++++
T Consensus 62 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~--- 138 (410)
T 3v8s_A 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAF--- 138 (410)
T ss_dssp HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEE---
T ss_pred HhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEE---
Confidence 344445689999999999999999999999899999999996421 22335688999999999999999999994
Q ss_pred cccCCceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeec
Q 045798 754 DFQGNDFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLD 833 (1008)
Q Consensus 754 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~ 833 (1008)
.+++..|+||||+++|+|.+++... .+++..++.++.||+.||+|||+. +|+||||||+|||++
T Consensus 139 --~~~~~~~lV~E~~~gg~L~~~l~~~-----------~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~ 202 (410)
T 3v8s_A 139 --QDDRYLYMVMEYMPGGDLVNLMSNY-----------DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLD 202 (410)
T ss_dssp --ECSSEEEEEECCCTTEEHHHHHHHC-----------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEC
T ss_pred --EECCEEEEEEeCCCCCcHHHHHHcC-----------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeEC
Confidence 5677899999999999999998643 588999999999999999999998 999999999999999
Q ss_pred CCCCeEEcccCcccccccccCccccccccccccccccCccccCCCC----CCcccchhhHHHHHHHHHhCCCCCCccccC
Q 045798 834 NDLSGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSE----VSTNGDVYSYGILLLEMVTAKKPTDVMFEG 909 (1008)
Q Consensus 834 ~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~sDvwslG~vl~elltG~~pf~~~~~~ 909 (1008)
.++.+||+|||+|+........ ......||+.|+|||++.+.. ++.++|||||||++|||++|+.||......
T Consensus 203 ~~g~ikL~DFG~a~~~~~~~~~---~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~ 279 (410)
T 3v8s_A 203 KSGHLKLADFGTCMKMNKEGMV---RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV 279 (410)
T ss_dssp TTSCEEECCCTTCEECCTTSEE---ECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHH
T ss_pred CCCCEEEeccceeEeeccCCcc---cccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChh
Confidence 9999999999999865433211 123456999999999987655 889999999999999999999998632110
Q ss_pred CccHHHHHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCC--CCCHHHHHH
Q 045798 910 DLNLHNFARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQD--RMNMTNVVH 986 (1008)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPt~~evl~ 986 (1008)
. ....... ... ...+ +.....+.++.+++.+||+.+|.+ ||+++||++
T Consensus 280 ~-~~~~i~~----------------~~~--------~~~~----p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~ 329 (410)
T 3v8s_A 280 G-TYSKIMN----------------HKN--------SLTF----PDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKR 329 (410)
T ss_dssp H-HHHHHHT----------------HHH--------HCCC----CTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHT
T ss_pred h-HHHHHHh----------------ccc--------cccC----CCcccccHHHHHHHHHHccChhhhCCCCCHHHHhc
Confidence 0 0000000 000 0000 000123456789999999999998 999999986
No 115
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=3.4e-38 Score=364.46 Aligned_cols=374 Identities=18% Similarity=0.173 Sum_probs=252.1
Q ss_pred CCeeeecCCCCCCCCCccccCCCCCCEEEccCCCCCCccCcccccCcCcceEeeeccccccCCCccccccCCCCeeeccc
Q 045798 80 LREINLSNNTIQGEIPPEFGRLFRLEALFLSNNSLVGKIPANLSYCSRLTVLCIEYNKLQGRIPLEFVSLSKLKDLSLAK 159 (1008)
Q Consensus 80 L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~ 159 (1008)
++..........+..+..++++++|++|++++|.+++. | .++.+++|++|+|++|++++. | ++.+++|++|++++
T Consensus 20 l~~~~~~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~ 94 (457)
T 3bz5_A 20 FASEVAAAFEMQATDTISEEQLATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDS 94 (457)
T ss_dssp HHHHHHHHTTCCTTSEEEHHHHTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCS
T ss_pred HHHHHHHhcCcCcccccChhHcCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcC
Confidence 34444444555666677889999999999999999964 5 689999999999999999964 4 88899999999999
Q ss_pred ccCCCCCCCCCccccccchhhcccccCCCCCCccccCCCCCcEEEecCCcccccCCccccCCCCcceeccccccccccCC
Q 045798 160 NKLTGGIPPFLGNLTSLEVLSLAGNSFGRNIPDSLGQLKQLKILAIGGNNLSGPIPPSIYNLSFLVVFSVSHNQIHGSLP 239 (1008)
Q Consensus 160 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~lp 239 (1008)
|++++. + ++++++|++|++++|++++. + ++.+++|++|++++|++++. .++.+++|++|++++|+..+.++
T Consensus 95 N~l~~~-~--~~~l~~L~~L~L~~N~l~~l-~--~~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~n~~~~~~~ 165 (457)
T 3bz5_A 95 NKLTNL-D--VTPLTKLTYLNCDTNKLTKL-D--VSQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKKITKLD 165 (457)
T ss_dssp SCCSCC-C--CTTCTTCCEEECCSSCCSCC-C--CTTCTTCCEEECTTSCCSCC---CCTTCTTCCEEECTTCSCCCCCC
T ss_pred CCCcee-e--cCCCCcCCEEECCCCcCCee-c--CCCCCcCCEEECCCCcccee---ccccCCcCCEEECCCCCcccccc
Confidence 999864 3 88899999999999998763 3 88889999999999998864 27778888888888886544552
Q ss_pred hhhhhcCCCCcEEEeccccCCCCCCcccccCCCCceeecccccccccccccccCCCcccccccccccCCCCCCCcccccc
Q 045798 240 PSLGLLLPNLKFFQIHHNFFSGSIPISLSNASKLEHIEIANNNFSGKLSVNFGGMKNLSLLNLQFSNLGSGESDEMGFMN 319 (1008)
Q Consensus 240 ~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~ 319 (1008)
+..+++|++|++++|.+++ +| +..+++|+.|++++|++++. .
T Consensus 166 ---~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~----------------------------- 207 (457)
T 3bz5_A 166 ---VTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---D----------------------------- 207 (457)
T ss_dssp ---CTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---C-----------------------------
T ss_pred ---cccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee---c-----------------------------
Confidence 2335666666666666664 33 55566666666666665543 1
Q ss_pred cccccCCCcEEEecCCcCCccCChhhhhhcccceeeeeccccccCCCCCccccccccceEEecCccccCCcchhccCCCC
Q 045798 320 SLTNCSKLRVLSLGGNQFRGALPHSIANLSSQLQILILSSNQFYGSIPLGIGNLVDLYLLGMVENQFTGAIPKEMGKLQK 399 (1008)
Q Consensus 320 ~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 399 (1008)
+..+++|+.|++++|++++ +| +..+. +|++|++++|++++.. +..+++|+.|++++| +
T Consensus 208 -l~~l~~L~~L~Ls~N~l~~-ip--~~~l~-~L~~L~l~~N~l~~~~---~~~l~~L~~L~l~~n--------------~ 265 (457)
T 3bz5_A 208 -LNQNIQLTFLDCSSNKLTE-ID--VTPLT-QLTYFDCSVNPLTELD---VSTLSKLTTLHCIQT--------------D 265 (457)
T ss_dssp -CTTCTTCSEEECCSSCCSC-CC--CTTCT-TCSEEECCSSCCSCCC---CTTCTTCCEEECTTC--------------C
T ss_pred -cccCCCCCEEECcCCcccc-cC--ccccC-CCCEEEeeCCcCCCcC---HHHCCCCCEEeccCC--------------C
Confidence 3345566666666776664 44 44443 4777777777777532 445667777776654 4
Q ss_pred CceEEccCCcccccccccccCCCCcceeeccccccccccCCCCcCCCcccEeecccccccCCcchhhhhhhhhhhhhccc
Q 045798 400 LQGLDFSGNHFSGEIPSSLGNLSSLYEVFFNNNNLSGVIPFSLGNLKRLAFLEMSGNELSGTIPEDIFNISYLSNSLNLA 479 (1008)
Q Consensus 400 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~~~~~~~~~~~~L~L~ 479 (1008)
|+.|++++|.+.+.+| ++.+++|+.|++++|.+.+.+|. ...+|+.|++++|
T Consensus 266 L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~---~~~~L~~L~l~~~----------------------- 317 (457)
T 3bz5_A 266 LLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDC---QAAGITELDLSQN----------------------- 317 (457)
T ss_dssp CSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEEC---TTCCCSCCCCTTC-----------------------
T ss_pred CCEEECCCCccCCccc--ccccccCCEEECCCCcccceecc---CCCcceEechhhc-----------------------
Confidence 5677888888776666 45666777777777766655553 2234444444333
Q ss_pred CccccCCCcccccccccccccccccccccCCCCcccccccccceeeccCcccccchhhhhhccccccEEecCCCcccccc
Q 045798 480 RNHLVGIIPPRIGNLRALRSFDVSNNDLSGEIPIELGHCSSLEEIYLAGNLFHGSIPSFFNALKGVQKIDLSRNNLSGQI 559 (1008)
Q Consensus 480 ~N~l~~~~p~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~ 559 (1008)
++|+.|++++|++++ ++ ++.+++|+.|++++|+|++ ++.|..|++++|.++|.
T Consensus 318 ---------------~~L~~L~L~~N~l~~-l~--l~~l~~L~~L~l~~N~l~~--------l~~L~~L~l~~n~l~g~- 370 (457)
T 3bz5_A 318 ---------------PKLVYLYLNNTELTE-LD--VSHNTKLKSLSCVNAHIQD--------FSSVGKIPALNNNFEAE- 370 (457)
T ss_dssp ---------------TTCCEEECTTCCCSC-CC--CTTCTTCSEEECCSSCCCB--------CTTGGGSSGGGTSEEEE-
T ss_pred ---------------ccCCEEECCCCcccc-cc--cccCCcCcEEECCCCCCCC--------ccccccccccCCcEEec-
Confidence 345556666666654 22 5556666666666666654 23445556666666654
Q ss_pred cCcccccccceeecccCcccccCCCC
Q 045798 560 PIFLEALSLEYLNLSFNDFEGKIPAK 585 (1008)
Q Consensus 560 p~~~~~~~L~~L~l~~N~l~g~~p~~ 585 (1008)
..+..|..+++++|+|+|.||..
T Consensus 371 ---~~~~~l~~l~l~~N~l~g~ip~~ 393 (457)
T 3bz5_A 371 ---GQTITMPKETLTNNSLTIAVSPD 393 (457)
T ss_dssp ---EEEEECCCBCCBTTBEEEECCTT
T ss_pred ---ceeeecCccccccCcEEEEcChh
Confidence 23445666677777777777653
No 116
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=1.5e-39 Score=360.69 Aligned_cols=260 Identities=24% Similarity=0.398 Sum_probs=200.2
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeE----EEEEEeccc-cchhhHHHHHHHHHHhhcCCCCceeeeeccccccccC
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIV----VAIKVINLQ-CEGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQG 757 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~----vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 757 (1008)
.++|++.+.||+|+||+||+|++..+++. ||+|+++.. .....+.+.+|+.++++++||||++++++|..
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----- 88 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT----- 88 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEES-----
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEec-----
Confidence 35799999999999999999998766654 588877533 23445789999999999999999999999643
Q ss_pred CceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCC
Q 045798 758 NDFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLS 837 (1008)
Q Consensus 758 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 837 (1008)
...++|+||+++|+|.+++..... .+++..++.|+.||+.||+|||+. +|+||||||+||+++.++.
T Consensus 89 -~~~~~v~e~~~~g~L~~~l~~~~~---------~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~ 155 (327)
T 3poz_A 89 -STVQLITQLMPFGCLLDYVREHKD---------NIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQH 155 (327)
T ss_dssp -SSEEEEEECCTTCBHHHHHHHSTT---------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTE
T ss_pred -CCeEEEEEecCCCcHHHHHHhcCC---------CCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCC
Confidence 237899999999999999976432 689999999999999999999998 9999999999999999999
Q ss_pred eEEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHh-CCCCCCccccCCccHHHH
Q 045798 838 GHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVT-AKKPTDVMFEGDLNLHNF 916 (1008)
Q Consensus 838 ~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-G~~pf~~~~~~~~~~~~~ 916 (1008)
+||+|||+|+......... ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||....... ....
T Consensus 156 ~kl~Dfg~a~~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--~~~~ 231 (327)
T 3poz_A 156 VKITDFGLAKLLGAEEKEY--HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE--ISSI 231 (327)
T ss_dssp EEECCTTHHHHHTTTCC---------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--HHHH
T ss_pred EEEccCcceeEccCCcccc--cccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHH--HHHH
Confidence 9999999998665433221 1223447889999999999999999999999999999999 999986432111 1111
Q ss_pred HHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHHHHHHHHH
Q 045798 917 ARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHELQSVKNI 994 (1008)
Q Consensus 917 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~i~~~ 994 (1008)
.. .... .+ ....++..+.+++.+||+.||++|||+.|+++.|+.+...
T Consensus 232 ~~------------~~~~--------------~~----~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~ 279 (327)
T 3poz_A 232 LE------------KGER--------------LP----QPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp HH------------TTCC--------------CC----CCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred HH------------cCCC--------------CC----CCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence 11 0000 00 0012345678999999999999999999999999988654
No 117
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=4.2e-39 Score=350.88 Aligned_cols=263 Identities=24% Similarity=0.398 Sum_probs=214.2
Q ss_pred HhcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCceE
Q 045798 682 ATNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDFK 761 (1008)
Q Consensus 682 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 761 (1008)
..++|++.+.||+|+||.||+|.+..+++.||+|+++.. ....+.+.+|++++++++||||+++++++ ..++..
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~~~ 84 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVC-----TREPPF 84 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC-STHHHHHHHHHHHHHHCCCTTBCCEEEEE-----CSSSSE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEE-----ccCCCE
Confidence 467899999999999999999999988999999999754 44567899999999999999999999995 456678
Q ss_pred EEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeEEc
Q 045798 762 AIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGHIG 841 (1008)
Q Consensus 762 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 841 (1008)
++||||+++++|.+++...... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 85 ~~v~e~~~~~~L~~~~~~~~~~--------~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~ 153 (288)
T 3kfa_A 85 YIITEFMTYGNLLDYLRECNRQ--------EVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVA 153 (288)
T ss_dssp EEEEECCTTEEHHHHHHHCCTT--------TSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEEC
T ss_pred EEEEEcCCCCcHHHHHHhcccC--------CccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEc
Confidence 9999999999999999764322 689999999999999999999998 99999999999999999999999
Q ss_pred ccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHh-CCCCCCccccCCccHHHHHHhh
Q 045798 842 DFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVT-AKKPTDVMFEGDLNLHNFARMA 920 (1008)
Q Consensus 842 Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-G~~pf~~~~~~~~~~~~~~~~~ 920 (1008)
|||.+......... ......+|+.|+|||++.+..++.++||||||+++|+|++ |..||...... .......
T Consensus 154 Dfg~~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~--~~~~~~~-- 226 (288)
T 3kfa_A 154 DFGLSRLMTGDTYT---AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYELLE-- 226 (288)
T ss_dssp CCCGGGTSCSSSSE---EETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GHHHHHH--
T ss_pred cCccceeccCCccc---cccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHh--
Confidence 99999866543222 1223457889999999988899999999999999999999 99998643211 0111110
Q ss_pred CCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHHHHHHHHHHH
Q 045798 921 LPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHELQSVKNILL 996 (1008)
Q Consensus 921 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~i~~~~~ 996 (1008)
..... .....++..+.+++.+||+.||.+|||++|+++.|+++.....
T Consensus 227 ----------~~~~~------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~~~ 274 (288)
T 3kfa_A 227 ----------KDYRM------------------ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESS 274 (288)
T ss_dssp ----------TTCCC------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred ----------ccCCC------------------CCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHhcc
Confidence 00000 0001234568999999999999999999999999999877644
No 118
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=2.5e-39 Score=363.18 Aligned_cols=254 Identities=22% Similarity=0.257 Sum_probs=194.0
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCceEE
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 762 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 762 (1008)
.++|++.+.||+|+||.||+|++..+++.||||++... ....+.+.+|+.++++++||||+++++++ ..++..+
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~-----~~~~~~~ 92 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERG-AAIDENVQREIINHRSLRHPNIVRFKEVI-----LTPTHLA 92 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESS-TTSCHHHHHHHHHHHHCCCTTBCCEEEEE-----ECSSEEE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecC-ccccHHHHHHHHHHHhCCCCCCCcEEEEE-----eeCCEEE
Confidence 56899999999999999999999989999999999754 23346789999999999999999999994 4567799
Q ss_pred EEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCC--eEE
Q 045798 763 IVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLS--GHI 840 (1008)
Q Consensus 763 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~--~kL 840 (1008)
+||||+++|+|.+++...+ ++++..++.++.|++.||+|||++ +|+||||||+||+++.++. +||
T Consensus 93 lv~e~~~~~~L~~~l~~~~----------~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl 159 (361)
T 3uc3_A 93 IIMEYASGGELYERICNAG----------RFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKI 159 (361)
T ss_dssp EEEECCCSCBHHHHHHHHS----------SCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEE
T ss_pred EEEEeCCCCCHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEE
Confidence 9999999999999986543 689999999999999999999998 9999999999999987765 999
Q ss_pred cccCcccccccccCccccccccccccccccCccccCCCCCCcc-cchhhHHHHHHHHHhCCCCCCccccCCccHHHHHHh
Q 045798 841 GDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTN-GDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFARM 919 (1008)
Q Consensus 841 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~~ 919 (1008)
+|||+++....... .....||+.|+|||++.+..++.+ +||||+||++|+|++|+.||........ .......
T Consensus 160 ~Dfg~a~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~-~~~~~~~ 233 (361)
T 3uc3_A 160 CDFGYSKSSVLHSQ-----PKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRD-YRKTIQR 233 (361)
T ss_dssp CCCCCC--------------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCC-HHHHHHH
T ss_pred eecCccccccccCC-----CCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHH-HHHHHHH
Confidence 99999974332211 123459999999999988877655 8999999999999999999975322211 1111110
Q ss_pred hCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHH
Q 045798 920 ALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHE 987 (1008)
Q Consensus 920 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 987 (1008)
. ..... ..+.....+.++.+++.+||+.||++|||+.|+++.
T Consensus 234 ~--------~~~~~------------------~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 234 I--------LSVKY------------------SIPDDIRISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp H--------HTTCC------------------CCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred H--------hcCCC------------------CCCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 0 00000 000011234567899999999999999999999863
No 119
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.3e-39 Score=363.14 Aligned_cols=262 Identities=24% Similarity=0.412 Sum_probs=195.1
Q ss_pred CCCCCceEeeccCeeEEEEEEcCC---CeEEEEEEeccc-cchhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCce
Q 045798 685 GFSSTHLIGVGSFGCVYKGALDED---GIVVAIKVINLQ-CEGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDF 760 (1008)
Q Consensus 685 ~y~~~~~lg~G~~g~Vy~~~~~~~---~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 760 (1008)
.|.+.+.||+|+||.||+|.+..+ +..||+|+++.. .....+.+.+|+.++++++||||++++++|. ..++.
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~----~~~~~ 165 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICL----RSEGS 165 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEEC----CCSSC
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEE----cCCCC
Confidence 466778999999999999997533 246899998743 3355678999999999999999999999863 34456
Q ss_pred EEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeEE
Q 045798 761 KAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGHI 840 (1008)
Q Consensus 761 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 840 (1008)
.++||||+++|+|.+++..... .+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||
T Consensus 166 ~~lv~e~~~~g~L~~~l~~~~~---------~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL 233 (373)
T 3c1x_A 166 PLVVLPYMKHGDLRNFIRNETH---------NPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKV 233 (373)
T ss_dssp CEEEEECCTTCBHHHHHHCTTC---------CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEE
T ss_pred eEEEEECCCCCCHHHHHhhccc---------CCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEE
Confidence 7999999999999999975432 578899999999999999999998 9999999999999999999999
Q ss_pred cccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHh-CCCCCCccccCCccHHHHHHh
Q 045798 841 GDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVT-AKKPTDVMFEGDLNLHNFARM 919 (1008)
Q Consensus 841 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-G~~pf~~~~~~~~~~~~~~~~ 919 (1008)
+|||+++.................+|+.|+|||++.+..++.++|||||||++|||++ |.+||......+ .......
T Consensus 234 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~--~~~~~~~ 311 (373)
T 3c1x_A 234 ADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD--ITVYLLQ 311 (373)
T ss_dssp CCC---------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSC--HHHHHHT
T ss_pred eeccccccccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHH--HHHHHHc
Confidence 9999998664433222222233457889999999998899999999999999999999 666765332111 1111100
Q ss_pred hCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHHHHHHHHH
Q 045798 920 ALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHELQSVKNI 994 (1008)
Q Consensus 920 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~i~~~ 994 (1008)
.. +.. ....++..+.+++.+||+.||++|||+.|+++.|+++...
T Consensus 312 ~~--------------------------~~~----~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~ 356 (373)
T 3c1x_A 312 GR--------------------------RLL----QPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST 356 (373)
T ss_dssp TC--------------------------CCC----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred CC--------------------------CCC----CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 00 000 0012345689999999999999999999999999988654
No 120
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=1.3e-39 Score=358.63 Aligned_cols=265 Identities=23% Similarity=0.333 Sum_probs=197.9
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEecccc---chhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCc
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQC---EGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGND 759 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 759 (1008)
.++|++.+.||+|+||.||+|++..+++.||||+++... ......+.+|++++++++||||+++++++.... ..+.
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~~ 89 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAET-PAGP 89 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEE-TTEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccC-CCCc
Confidence 468999999999999999999998899999999997542 233467899999999999999999999865422 1223
Q ss_pred eEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeE
Q 045798 760 FKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGH 839 (1008)
Q Consensus 760 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 839 (1008)
..|+||||+++++|.+++.... .+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 90 ~~~lv~e~~~g~~L~~~l~~~~----------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~k 156 (311)
T 3ork_A 90 LPYIVMEYVDGVTLRDIVHTEG----------PMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVK 156 (311)
T ss_dssp EEEEEEECCCEEEHHHHHHHHC----------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEE
T ss_pred ccEEEEecCCCCCHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEE
Confidence 4599999999999999997543 689999999999999999999998 999999999999999999999
Q ss_pred EcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHHh
Q 045798 840 IGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFARM 919 (1008)
Q Consensus 840 L~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~~ 919 (1008)
|+|||+++......... .......||+.|+|||++.+..++.++|||||||++|||++|+.||............ ...
T Consensus 157 l~Dfg~a~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~-~~~ 234 (311)
T 3ork_A 157 VMDFGIARAIADSGNSV-TQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQH-VRE 234 (311)
T ss_dssp ECCCSCC-------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH-HHC
T ss_pred EeeccCccccccccccc-ccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH-hcC
Confidence 99999998665432221 1223356899999999999999999999999999999999999998643211100000 000
Q ss_pred hCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHH-HHHHHH
Q 045798 920 ALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVV-HELQSV 991 (1008)
Q Consensus 920 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl-~~L~~i 991 (1008)
.. .. + .......+.++.+++.+||+.||++||++.+++ +.+.++
T Consensus 235 ~~------------~~-~---------------~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 279 (311)
T 3ork_A 235 DP------------IP-P---------------SARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV 279 (311)
T ss_dssp CC------------CC-H---------------HHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred CC------------CC-c---------------ccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence 00 00 0 000112455689999999999999999766655 444443
No 121
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=5.8e-39 Score=365.42 Aligned_cols=287 Identities=17% Similarity=0.186 Sum_probs=205.6
Q ss_pred hcCCCCCceEeec--cCeeEEEEEEcCCCeEEEEEEecccc--chhhHHHHHHHHHHhhcCCCCceeeeeccccccccCC
Q 045798 683 TNGFSSTHLIGVG--SFGCVYKGALDEDGIVVAIKVINLQC--EGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGN 758 (1008)
Q Consensus 683 ~~~y~~~~~lg~G--~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 758 (1008)
.++|++.+.||+| +||.||+|++..+++.||||+++... ....+.+.+|++++++++||||+++++++ ..+
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-----~~~ 98 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATF-----IAD 98 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----EET
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEE-----EEC
Confidence 5689999999999 99999999999899999999997543 34456788999999999999999999995 456
Q ss_pred ceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCe
Q 045798 759 DFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSG 838 (1008)
Q Consensus 759 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 838 (1008)
+..++||||+++|+|.+++...... .+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+
T Consensus 99 ~~~~lv~e~~~~~~L~~~l~~~~~~--------~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~ 167 (389)
T 3gni_B 99 NELWVVTSFMAYGSAKDLICTHFMD--------GMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKV 167 (389)
T ss_dssp TEEEEEEECCTTCBHHHHHHHTCTT--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCE
T ss_pred CEEEEEEEccCCCCHHHHHhhhccc--------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCE
Confidence 6799999999999999999765322 689999999999999999999998 99999999999999999999
Q ss_pred EEcccCcccccccccCc---cccccccccccccccCccccCC--CCCCcccchhhHHHHHHHHHhCCCCCCccccCCccH
Q 045798 839 HIGDFGLARFHQEVSNS---TLSSSVGVKGTIGYTAPEYGLG--SEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNL 913 (1008)
Q Consensus 839 kL~Dfg~a~~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~ 913 (1008)
||+|||.+......... .........||+.|+|||++.+ ..++.++|||||||++|||++|+.||..........
T Consensus 168 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~ 247 (389)
T 3gni_B 168 YLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLL 247 (389)
T ss_dssp EECCGGGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHH
T ss_pred EEcccccceeeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
Confidence 99999998754332211 1111222468999999999887 578999999999999999999999997532222111
Q ss_pred HHHHHhhCCcchh-------hh--------hcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCC
Q 045798 914 HNFARMALPNQVM-------DI--------VDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDR 978 (1008)
Q Consensus 914 ~~~~~~~~~~~~~-------~~--------~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 978 (1008)
. ......+.... .. ....+........ ...........+.....+..+.+++.+||+.||++|
T Consensus 248 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R 325 (389)
T 3gni_B 248 E-KLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTST-PRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDAR 325 (389)
T ss_dssp H-C---------------------------------------------------------CCHHHHHHHHHHTCSCTTTS
T ss_pred H-HhcCCCCccccccccccccccccccccccccccccccccCc-cccccCCCCCCccccccCHHHHHHHHHHhhcCcccC
Confidence 1 11000000000 00 0000000000000 000000000111123456678999999999999999
Q ss_pred CCHHHHHHH
Q 045798 979 MNMTNVVHE 987 (1008)
Q Consensus 979 Pt~~evl~~ 987 (1008)
||++|+++.
T Consensus 326 pta~ell~h 334 (389)
T 3gni_B 326 PSASTLLNH 334 (389)
T ss_dssp CCHHHHTTS
T ss_pred CCHHHHhcC
Confidence 999999853
No 122
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=5.2e-39 Score=373.90 Aligned_cols=204 Identities=30% Similarity=0.367 Sum_probs=162.4
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccc--cchhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCce
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQ--CEGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDF 760 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 760 (1008)
.++|++.+.||+|+||.||+|++..+++.||||++... .....+++.+|++++++++||||+++++++..........
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 46899999999999999999999989999999998643 2344578999999999999999999999987655566678
Q ss_pred EEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeEE
Q 045798 761 KAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGHI 840 (1008)
Q Consensus 761 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 840 (1008)
.|+||||+ +++|.+++.... .+++..++.++.||+.||+|||+. +||||||||+|||++.++.+||
T Consensus 132 ~~lv~e~~-~~~L~~~~~~~~----------~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl 197 (458)
T 3rp9_A 132 LYVVLEIA-DSDFKKLFRTPV----------YLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKV 197 (458)
T ss_dssp EEEEECCC-SEEHHHHHHSSC----------CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEE
T ss_pred EEEEEecc-ccchhhhcccCC----------CCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEee
Confidence 99999998 679999987553 689999999999999999999998 9999999999999999999999
Q ss_pred cccCcccccccccCcc-----------------------ccccccccccccccCcccc-CCCCCCcccchhhHHHHHHHH
Q 045798 841 GDFGLARFHQEVSNST-----------------------LSSSVGVKGTIGYTAPEYG-LGSEVSTNGDVYSYGILLLEM 896 (1008)
Q Consensus 841 ~Dfg~a~~~~~~~~~~-----------------------~~~~~~~~gt~~y~aPE~~-~~~~~~~~sDvwslG~vl~el 896 (1008)
+|||+|+......... .......+||+.|+|||++ .+..++.++|||||||++|||
T Consensus 198 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~el 277 (458)
T 3rp9_A 198 CDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAEL 277 (458)
T ss_dssp CCCTTCBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHH
T ss_pred cccccchhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHH
Confidence 9999998764322110 0122345689999999976 556799999999999999999
Q ss_pred HhCC
Q 045798 897 VTAK 900 (1008)
Q Consensus 897 ltG~ 900 (1008)
++|.
T Consensus 278 ltg~ 281 (458)
T 3rp9_A 278 LNMI 281 (458)
T ss_dssp HTTS
T ss_pred HHhc
Confidence 9943
No 123
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-38 Score=348.99 Aligned_cols=263 Identities=24% Similarity=0.360 Sum_probs=205.4
Q ss_pred CCCCCceEeeccCeeEEEEEEcCCC---eEEEEEEeccccc-hhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCce
Q 045798 685 GFSSTHLIGVGSFGCVYKGALDEDG---IVVAIKVINLQCE-GASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDF 760 (1008)
Q Consensus 685 ~y~~~~~lg~G~~g~Vy~~~~~~~~---~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 760 (1008)
.|.+.+.||+|+||+||+|.+..++ ..||+|+++.... ...+.+.+|++++++++||||+++++++. ..+..
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~----~~~~~ 97 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIML----PPEGL 97 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEC----CSSSC
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEe----cCCCC
Confidence 4566789999999999999975444 3799999975433 44578999999999999999999999964 23344
Q ss_pred EEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeEE
Q 045798 761 KAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGHI 840 (1008)
Q Consensus 761 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 840 (1008)
.++||||+.+|+|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 98 ~~~v~e~~~~~~L~~~~~~~~~---------~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl 165 (298)
T 3pls_A 98 PHVLLPYMCHGDLLQFIRSPQR---------NPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKV 165 (298)
T ss_dssp CEEEECCCTTCBHHHHHHCTTC---------CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEE
T ss_pred cEEEEecccCCCHHHHHhcccc---------CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEe
Confidence 5899999999999999976432 688999999999999999999998 9999999999999999999999
Q ss_pred cccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHHhh
Q 045798 841 GDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFARMA 920 (1008)
Q Consensus 841 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~~~ 920 (1008)
+|||+++.................+|+.|+|||.+.+..++.++||||||+++|+|++|..|+........ ........
T Consensus 166 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~-~~~~~~~~ 244 (298)
T 3pls_A 166 ADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFD-LTHFLAQG 244 (298)
T ss_dssp CCTTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGG-HHHHHHTT
T ss_pred CcCCCcccccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHH-HHHHhhcC
Confidence 99999986654432222233345688999999999999999999999999999999997666532211111 11111100
Q ss_pred CCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHHHHHHHHH
Q 045798 921 LPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHELQSVKNI 994 (1008)
Q Consensus 921 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~i~~~ 994 (1008)
... + .....+..+.+++.+||+.||.+|||++|+++.|+++.+.
T Consensus 245 ~~~--------------------------~----~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~ 288 (298)
T 3pls_A 245 RRL--------------------------P----QPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSA 288 (298)
T ss_dssp CCC--------------------------C----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCC--------------------------C----CCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 000 0 0012345688999999999999999999999999998765
No 124
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=3.3e-39 Score=359.76 Aligned_cols=246 Identities=22% Similarity=0.264 Sum_probs=202.3
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEecccc---chhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCc
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQC---EGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGND 759 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 759 (1008)
.++|++.+.||+|+||.||+|++..+|+.||+|+++... ....+.+.+|+++++.++||||++++++ +.+++
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~-----~~~~~ 114 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS-----FKDNS 114 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEE-----EECSS
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEE-----EEcCC
Confidence 467999999999999999999999899999999996432 2345678999999999999999999998 45667
Q ss_pred eEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeE
Q 045798 760 FKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGH 839 (1008)
Q Consensus 760 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 839 (1008)
..|+||||+++|+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+|
T Consensus 115 ~~~lv~e~~~gg~L~~~l~~~~----------~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~k 181 (350)
T 1rdq_E 115 NLYMVMEYVAGGEMFSHLRRIG----------RFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQ 181 (350)
T ss_dssp EEEEEEECCTTCBHHHHHHHHC----------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEE
T ss_pred EEEEEEcCCCCCcHHHHHHHcC----------CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEE
Confidence 8999999999999999997643 689999999999999999999998 999999999999999999999
Q ss_pred EcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHHh
Q 045798 840 IGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFARM 919 (1008)
Q Consensus 840 L~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~~ 919 (1008)
|+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...... ........
T Consensus 182 L~DFg~a~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~-~~~~~i~~- 252 (350)
T 1rdq_E 182 VTDFGFAKRVKGR-------TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKIVS- 252 (350)
T ss_dssp ECCCTTCEECSSC-------BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHH-
T ss_pred EcccccceeccCC-------cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHH-HHHHHHHc-
Confidence 9999999865432 12346999999999999999999999999999999999999998642110 00000000
Q ss_pred hCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCC-----HHHHHH
Q 045798 920 ALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMN-----MTNVVH 986 (1008)
Q Consensus 920 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt-----~~evl~ 986 (1008)
... .++ ...+.++.+++.+||+.||.+||+ ++||++
T Consensus 253 -----------~~~--------------~~p------~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 253 -----------GKV--------------RFP------SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp -----------CCC--------------CCC------TTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred -----------CCC--------------CCC------CCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 000 000 113456789999999999999998 777765
No 125
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=5.7e-39 Score=354.64 Aligned_cols=269 Identities=24% Similarity=0.353 Sum_probs=210.1
Q ss_pred hcCCCCCceEeeccCeeEEEEEEc-----CCCeEEEEEEecccc-chhhHHHHHHHHHHhhcCCCCceeeeecccccccc
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALD-----EDGIVVAIKVINLQC-EGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQ 756 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 756 (1008)
.++|.+.+.||+|+||.||+|.+. .+++.||+|+++... ....+.+.+|++++++++||||+++++++ .
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~ 96 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGAC-----S 96 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-----C
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEE-----e
Confidence 567999999999999999999983 456899999997543 34457899999999999999999999995 4
Q ss_pred CCceEEEEEeccCCCChhcccccCCCCCC--------------CcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCcee
Q 045798 757 GNDFKAIVYEYMPNGSLEKWLHPHAVPKR--------------DKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILH 822 (1008)
Q Consensus 757 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~--------------~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH 822 (1008)
.++..++||||+++++|.+++........ .......+++.+++.++.||+.||+|||+. +|+|
T Consensus 97 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH 173 (314)
T 2ivs_A 97 QDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVH 173 (314)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEEC
T ss_pred cCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcc
Confidence 55678999999999999999976542100 000112589999999999999999999998 9999
Q ss_pred ccCCCCCeeecCCCCeEEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHh-CCC
Q 045798 823 CDLKPSNILLDNDLSGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVT-AKK 901 (1008)
Q Consensus 823 ~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-G~~ 901 (1008)
|||||+||+++.++.+||+|||+++......... ......+|+.|+|||.+.+..++.++|||||||++|||++ |+.
T Consensus 174 ~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~ 251 (314)
T 2ivs_A 174 RDLAARNILVAEGRKMKISDFGLSRDVYEEDSYV--KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGN 251 (314)
T ss_dssp CCCSGGGEEEETTTEEEECCCTTCEECTTTSCEE--CSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCC
T ss_pred cccchheEEEcCCCCEEEccccccccccccccce--eccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999998664432221 1223447889999999988889999999999999999999 999
Q ss_pred CCCccccCCccHHHHHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCH
Q 045798 902 PTDVMFEGDLNLHNFARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNM 981 (1008)
Q Consensus 902 pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~ 981 (1008)
||...... ............ .....++..+.+++.+||+.||++|||+
T Consensus 252 p~~~~~~~--~~~~~~~~~~~~------------------------------~~~~~~~~~~~~li~~~l~~dp~~Rps~ 299 (314)
T 2ivs_A 252 PYPGIPPE--RLFNLLKTGHRM------------------------------ERPDNCSEEMYRLMLQCWKQEPDKRPVF 299 (314)
T ss_dssp SSTTCCGG--GHHHHHHTTCCC------------------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred CCCCCCHH--HHHHHhhcCCcC------------------------------CCCccCCHHHHHHHHHHccCChhhCcCH
Confidence 98643211 111111000000 0001234568999999999999999999
Q ss_pred HHHHHHHHHHHH
Q 045798 982 TNVVHELQSVKN 993 (1008)
Q Consensus 982 ~evl~~L~~i~~ 993 (1008)
.|+++.|+++..
T Consensus 300 ~~l~~~l~~~~~ 311 (314)
T 2ivs_A 300 ADISKDLEKMMV 311 (314)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 999999998765
No 126
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=3e-39 Score=356.66 Aligned_cols=284 Identities=25% Similarity=0.375 Sum_probs=190.5
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEecccc-chhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCceE
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQC-EGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDFK 761 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 761 (1008)
.++|++.+.||+|+||.||+|.+..+++.||+|+++... ....+.+.+|++++++++||||+++++++ ..++..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~~~~ 78 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVI-----HTENKL 78 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEE-----CCTTEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEE-----EECCeE
Confidence 468999999999999999999998899999999997543 23456789999999999999999999994 556779
Q ss_pred EEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeEEc
Q 045798 762 AIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGHIG 841 (1008)
Q Consensus 762 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 841 (1008)
++||||++ |+|.+++........ ...+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 79 ~lv~e~~~-~~L~~~l~~~~~~~~----~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~ 150 (317)
T 2pmi_A 79 TLVFEFMD-NDLKKYMDSRTVGNT----PRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLG 150 (317)
T ss_dssp EEEEECCC-CBHHHHHHHHHSSSC----CCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEEC
T ss_pred EEEEEecC-CCHHHHHHhcccccc----ccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEEC
Confidence 99999996 699998865321110 11589999999999999999999998 99999999999999999999999
Q ss_pred ccCcccccccccCccccccccccccccccCccccCCC-CCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHHhh
Q 045798 842 DFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGS-EVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFARMA 920 (1008)
Q Consensus 842 Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~~~ 920 (1008)
|||+++........ .....||+.|+|||++.+. .++.++|||||||++|||++|+.||......+ .........
T Consensus 151 Dfg~~~~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~~ 225 (317)
T 2pmi_A 151 DFGLARAFGIPVNT----FSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEE-QLKLIFDIM 225 (317)
T ss_dssp CCSSCEETTSCCCC----CCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHH
T ss_pred cCccceecCCCccc----CCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHh
Confidence 99999865432221 1234589999999998764 68999999999999999999999997432211 111111111
Q ss_pred C-C-cchhhhhcccccCchHHh--hhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 921 L-P-NQVMDIVDPILRNDEEIL--ASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 921 ~-~-~~~~~~~d~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
. + ......+...-...+... ........+.+. .....+.++.+++.+||+.||++|||++|+++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 226 GTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPH--TKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp CSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGG--CSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred CCCChhHhhhhhhhhhcccccccccchhHHHhhccc--ccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 0 0 000000000000000000 000000000000 00123456899999999999999999999875
No 127
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=7.1e-39 Score=356.63 Aligned_cols=253 Identities=23% Similarity=0.313 Sum_probs=198.7
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEecccc---chhhHHHHHHHHHHhhc-CCCCceeeeeccccccccCC
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQC---EGASKSFMAECKALKNI-RHRNLVKVITSCSSIDFQGN 758 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~ 758 (1008)
.++|++.+.||+|+||.||+|++..+++.||+|+++... ....+.+.+|+.+++++ +||||+++++++ ...
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~-----~~~ 82 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCF-----QTE 82 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEE-----ECS
T ss_pred hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEE-----EeC
Confidence 357999999999999999999999899999999997542 33456788999999988 899999999994 566
Q ss_pred ceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCe
Q 045798 759 DFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSG 838 (1008)
Q Consensus 759 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 838 (1008)
+..|+||||+++|+|.+++.... .+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+
T Consensus 83 ~~~~lv~e~~~gg~L~~~l~~~~----------~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~ 149 (345)
T 3a8x_A 83 SRLFFVIEYVNGGDLMFHMQRQR----------KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHI 149 (345)
T ss_dssp SEEEEEECCCCSCBHHHHHHHHS----------SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCE
T ss_pred CEEEEEEeCCCCCcHHHHHHHcC----------CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCE
Confidence 78999999999999999997543 689999999999999999999998 99999999999999999999
Q ss_pred EEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHH
Q 045798 839 HIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFAR 918 (1008)
Q Consensus 839 kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~ 918 (1008)
||+|||+++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+....
T Consensus 150 kL~DFG~a~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~---- 221 (345)
T 3a8x_A 150 KLTDYGMCKEGLRPGD----TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ---- 221 (345)
T ss_dssp EECCGGGCBCSCCTTC----CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC----------
T ss_pred EEEeccccccccCCCC----cccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCccccccccc----
Confidence 9999999985332221 12335699999999999999999999999999999999999999964211110000
Q ss_pred hhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCH
Q 045798 919 MALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNM 981 (1008)
Q Consensus 919 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~ 981 (1008)
............. ...++ ...+.++.+++.+||+.||.+||++
T Consensus 222 ----~~~~~~~~~i~~~----------~~~~p------~~~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 222 ----NTEDYLFQVILEK----------QIRIP------RSLSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp -----CHHHHHHHHHHC----------CCCCC------TTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred ----ccHHHHHHHHHcC----------CCCCC------CCCCHHHHHHHHHHhcCCHhHCCCC
Confidence 0000000000000 00011 1234567899999999999999996
No 128
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=3e-39 Score=358.19 Aligned_cols=273 Identities=20% Similarity=0.362 Sum_probs=194.9
Q ss_pred HhcCCCCCceEeeccCeeEEEEEEcCCCe---EEEEEEeccc--cchhhHHHHHHHHHHhhcCCCCceeeeecccccccc
Q 045798 682 ATNGFSSTHLIGVGSFGCVYKGALDEDGI---VVAIKVINLQ--CEGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQ 756 (1008)
Q Consensus 682 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~---~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 756 (1008)
..++|++.+.||+|+||.||+|.+..++. .||||+++.. .....+.+.+|++++++++||||+++++++......
T Consensus 21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 100 (323)
T 3qup_A 21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAK 100 (323)
T ss_dssp C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC---
T ss_pred ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccc
Confidence 35689999999999999999999876654 8999999754 345567899999999999999999999996532211
Q ss_pred -CCceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCC
Q 045798 757 -GNDFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDND 835 (1008)
Q Consensus 757 -~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 835 (1008)
.....++||||+++|+|.+++....... ....+++..++.++.|++.||+|||+. +|+||||||+||+++++
T Consensus 101 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~----~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~ 173 (323)
T 3qup_A 101 GRLPIPMVILPFMKHGDLHAFLLASRIGE----NPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAED 173 (323)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHHHC-------CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTT
T ss_pred cCCCccEEEEEeccCCcHHHHHHhhhccc----cccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCC
Confidence 1112489999999999999986543211 112589999999999999999999998 99999999999999999
Q ss_pred CCeEEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHh-CCCCCCccccCCccHH
Q 045798 836 LSGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVT-AKKPTDVMFEGDLNLH 914 (1008)
Q Consensus 836 ~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-G~~pf~~~~~~~~~~~ 914 (1008)
+.+||+|||+++......... ......+++.|+|||.+.+..++.++|||||||++|||++ |..||......+ ...
T Consensus 174 ~~~kl~Dfg~a~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~-~~~ 250 (323)
T 3qup_A 174 MTVCVADFGLSRKIYSGDYYR--QGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE-IYN 250 (323)
T ss_dssp SCEEECCCCC-------------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG-HHH
T ss_pred CCEEEeecccccccccccccc--ccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHH-HHH
Confidence 999999999998664432211 1223347889999999998899999999999999999999 899986432211 000
Q ss_pred HHHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHHHHHHHHH
Q 045798 915 NFARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHELQSVKNI 994 (1008)
Q Consensus 915 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~i~~~ 994 (1008)
....... .. .....+.++.+++.+||+.||++|||+.|+++.|+++...
T Consensus 251 ~~~~~~~-----------~~--------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~ 299 (323)
T 3qup_A 251 YLIGGNR-----------LK--------------------QPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGH 299 (323)
T ss_dssp HHHTTCC-----------CC--------------------CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHhcCCC-----------CC--------------------CCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 0000000 00 0012345689999999999999999999999999998765
Q ss_pred H
Q 045798 995 L 995 (1008)
Q Consensus 995 ~ 995 (1008)
.
T Consensus 300 ~ 300 (323)
T 3qup_A 300 L 300 (323)
T ss_dssp -
T ss_pred h
Confidence 3
No 129
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.6e-39 Score=367.32 Aligned_cols=287 Identities=20% Similarity=0.258 Sum_probs=215.4
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEecccc-chhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCceE
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQC-EGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDFK 761 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 761 (1008)
.++|++.+.||+|+||.||+|++..+++.||||+++... ....+.+.+|++++++++||||+++++++.. ......
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~---~~~~~~ 84 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEE---TTTRHK 84 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEEC---TTTCCE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeecc---CCCCee
Confidence 457999999999999999999999889999999997543 2345678899999999999999999998643 334468
Q ss_pred EEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeee----cCCCC
Q 045798 762 AIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILL----DNDLS 837 (1008)
Q Consensus 762 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll----~~~~~ 837 (1008)
++||||+++|+|.+++...... ..+++..++.++.||+.||+|||+. +|+||||||+||++ +.++.
T Consensus 85 ~lv~e~~~~g~L~~~l~~~~~~-------~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~ 154 (396)
T 4eut_A 85 VLIMEFCPCGSLYTVLEEPSNA-------YGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSV 154 (396)
T ss_dssp EEEECCCTTEEHHHHTTSGGGT-------TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEE
T ss_pred EEEEecCCCCCHHHHHHhhhcc-------cCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCcee
Confidence 9999999999999999764321 1489999999999999999999998 99999999999999 77788
Q ss_pred eEEcccCcccccccccCccccccccccccccccCccccCC--------CCCCcccchhhHHHHHHHHHhCCCCCCccccC
Q 045798 838 GHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLG--------SEVSTNGDVYSYGILLLEMVTAKKPTDVMFEG 909 (1008)
Q Consensus 838 ~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~sDvwslG~vl~elltG~~pf~~~~~~ 909 (1008)
+||+|||.++....... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||......
T Consensus 155 ~kL~DFG~a~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~ 229 (396)
T 4eut_A 155 YKLTDFGAARELEDDEQ-----FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGP 229 (396)
T ss_dssp EEECCGGGCEECCCGGG-----SSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCT
T ss_pred EEEecCCCceEccCCCc-----cccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcc
Confidence 99999999986644322 223458999999998764 46788999999999999999999999754332
Q ss_pred CccHHHHHHh--hCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHH
Q 045798 910 DLNLHNFARM--ALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHE 987 (1008)
Q Consensus 910 ~~~~~~~~~~--~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 987 (1008)
.......... ..+......+....... .......+.........+..+.+++.+||+.||++|||++|+++.
T Consensus 230 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~------~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~ 303 (396)
T 4eut_A 230 RRNKEVMYKIITGKPSGAISGVQKAENGP------IDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAE 303 (396)
T ss_dssp TTCHHHHHHHHHSCCTTCCEEEECSTTCC------EEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHH
T ss_pred cchHHHHHHHhcCCCcccchhheeccCCC------cccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHH
Confidence 2222221111 11111100000000000 000011111222235677889999999999999999999999999
Q ss_pred HHHHHH
Q 045798 988 LQSVKN 993 (1008)
Q Consensus 988 L~~i~~ 993 (1008)
++.+..
T Consensus 304 l~~il~ 309 (396)
T 4eut_A 304 TSDILH 309 (396)
T ss_dssp HHHHHT
T ss_pred HHHHhh
Confidence 988754
No 130
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=3.8e-39 Score=347.91 Aligned_cols=255 Identities=23% Similarity=0.332 Sum_probs=203.0
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEecccc--chhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCce
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQC--EGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDF 760 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 760 (1008)
.++|++.+.||+|+||.||+|++ .++.||||+++... ....+.+.+|+.++++++||||+++++++.. .....
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---~~~~~ 83 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRW--QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQS---PPAPH 83 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECT---TTSSS
T ss_pred HHHhHHHHHhcCCCcceEEEEEE--CCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEcc---CCCCC
Confidence 45799999999999999999998 48899999997543 3445679999999999999999999999643 22367
Q ss_pred EEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCC--ceeccCCCCCeeecCCCCe
Q 045798 761 KAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEP--ILHCDLKPSNILLDNDLSG 838 (1008)
Q Consensus 761 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~--ivH~Dlkp~NIll~~~~~~ 838 (1008)
.++||||+++|+|.+++...... .+++..++.++.|++.||+|||+. + |+||||||+||+++.++.+
T Consensus 84 ~~lv~e~~~~~~L~~~l~~~~~~--------~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~ 152 (271)
T 3kmu_A 84 PTLITHWMPYGSLYNVLHEGTNF--------VVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTA 152 (271)
T ss_dssp CEEEEECCTTCBHHHHHHSCSSC--------CCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCE
T ss_pred eEeeecccCCCcHHHHHhhcccC--------CCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcce
Confidence 89999999999999999865421 589999999999999999999997 7 9999999999999999999
Q ss_pred EEcccCcccccccccCccccccccccccccccCccccCCCCCCc---ccchhhHHHHHHHHHhCCCCCCccccCCccHHH
Q 045798 839 HIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVST---NGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHN 915 (1008)
Q Consensus 839 kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~ 915 (1008)
+++|||++..... ....||+.|+|||++.+..++. ++|||||||++|||++|+.||......+. ...
T Consensus 153 ~l~~~~~~~~~~~---------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-~~~ 222 (271)
T 3kmu_A 153 RISMADVKFSFQS---------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEI-GMK 222 (271)
T ss_dssp EEEGGGSCCTTSC---------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHH-HHH
T ss_pred eEEeccceeeecc---------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHH-HHH
Confidence 9999988764322 1234899999999988765544 79999999999999999999864321110 000
Q ss_pred HHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHHHHHHHH
Q 045798 916 FARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHELQSVKN 993 (1008)
Q Consensus 916 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~i~~ 993 (1008)
........ .. ....+..+.+++.+||+.||++|||++|+++.|+++.+
T Consensus 223 ~~~~~~~~----------------------------~~--~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 223 VALEGLRP----------------------------TI--PPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp HHHSCCCC----------------------------CC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred HHhcCCCC----------------------------CC--CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 00000000 00 01234568999999999999999999999999998753
No 131
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.3e-39 Score=360.42 Aligned_cols=273 Identities=22% Similarity=0.314 Sum_probs=207.8
Q ss_pred HhcCCCCCceEeeccCeeEEEEEE-----cCCCeEEEEEEecccc-chhhHHHHHHHHHHhhc-CCCCceeeeecccccc
Q 045798 682 ATNGFSSTHLIGVGSFGCVYKGAL-----DEDGIVVAIKVINLQC-EGASKSFMAECKALKNI-RHRNLVKVITSCSSID 754 (1008)
Q Consensus 682 ~~~~y~~~~~lg~G~~g~Vy~~~~-----~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 754 (1008)
..++|.+.+.||+|+||.||+|.+ ..+++.||+|+++... ....+.+.+|+++++++ +||||+++++++
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~---- 118 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGAC---- 118 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEE----
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEE----
Confidence 357899999999999999999997 2356789999997542 34457899999999999 999999999995
Q ss_pred ccCCceEEEEEeccCCCChhcccccCCCCCCC-------------cccccccCHHHHHHHHHHHHHHHHHHhhCCCCCce
Q 045798 755 FQGNDFKAIVYEYMPNGSLEKWLHPHAVPKRD-------------KEIEIKLTLLQRISIAIDVASALDYLHHHCQEPIL 821 (1008)
Q Consensus 755 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~-------------~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iv 821 (1008)
..++..++||||+++|+|.+++......... ......+++..++.++.||+.||+|||+. +|+
T Consensus 119 -~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~iv 194 (344)
T 1rjb_A 119 -TLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCV 194 (344)
T ss_dssp -CSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEE
T ss_pred -eeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---Ccc
Confidence 4456689999999999999999765421000 00112589999999999999999999998 999
Q ss_pred eccCCCCCeeecCCCCeEEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHh-CC
Q 045798 822 HCDLKPSNILLDNDLSGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVT-AK 900 (1008)
Q Consensus 822 H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-G~ 900 (1008)
||||||+||+++.++.+||+|||++.......... ......+|+.|+|||++.+..++.++|||||||++|||++ |.
T Consensus 195 H~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~ 272 (344)
T 1rjb_A 195 HRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYV--VRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGV 272 (344)
T ss_dssp ETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSE--EETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSC
T ss_pred cCCCChhhEEEcCCCcEEeCCCccCcccccCccce--eccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCC
Confidence 99999999999999999999999998665433221 1223457889999999988899999999999999999998 99
Q ss_pred CCCCccccCCccHHHHHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCC
Q 045798 901 KPTDVMFEGDLNLHNFARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMN 980 (1008)
Q Consensus 901 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt 980 (1008)
.||....... ............ . ....++.++.+++.+||+.||.+|||
T Consensus 273 ~p~~~~~~~~-~~~~~~~~~~~~----------------------------~--~~~~~~~~l~~li~~~l~~dp~~Rps 321 (344)
T 1rjb_A 273 NPYPGIPVDA-NFYKLIQNGFKM----------------------------D--QPFYATEEIYIIMQSCWAFDSRKRPS 321 (344)
T ss_dssp CSSTTCCCSH-HHHHHHHTTCCC----------------------------C--CCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred CCcccCCcHH-HHHHHHhcCCCC----------------------------C--CCCCCCHHHHHHHHHHcCCCchhCcC
Confidence 9986432111 111111100000 0 00123456899999999999999999
Q ss_pred HHHHHHHHHHHHHHH
Q 045798 981 MTNVVHELQSVKNIL 995 (1008)
Q Consensus 981 ~~evl~~L~~i~~~~ 995 (1008)
+.|+++.|+.+.+..
T Consensus 322 ~~~l~~~l~~~~~~~ 336 (344)
T 1rjb_A 322 FPNLTSFLGCQLADA 336 (344)
T ss_dssp HHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999886653
No 132
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=1.5e-39 Score=371.49 Aligned_cols=263 Identities=20% Similarity=0.209 Sum_probs=206.0
Q ss_pred HHHHHHHhcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEecccc---chhhHHHHHHHHHHhhcCCCCceeeeecccc
Q 045798 676 YKSLLKATNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQC---EGASKSFMAECKALKNIRHRNLVKVITSCSS 752 (1008)
Q Consensus 676 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 752 (1008)
+.++....++|++.++||+|+||+||+|++..+++.||+|+++... ......+.+|+.++..++||||++++++|
T Consensus 66 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~-- 143 (437)
T 4aw2_A 66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAF-- 143 (437)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEE--
T ss_pred hhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEE--
Confidence 3445556789999999999999999999999899999999996421 22234589999999999999999999994
Q ss_pred ccccCCceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeee
Q 045798 753 IDFQGNDFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILL 832 (1008)
Q Consensus 753 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll 832 (1008)
.+++..|+||||+++|+|.+++..... .+++..++.++.||+.||+|||+. +||||||||+|||+
T Consensus 144 ---~~~~~~~lV~Ey~~gg~L~~~l~~~~~---------~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl 208 (437)
T 4aw2_A 144 ---QDDNNLYLVMDYYVGGDLLTLLSKFED---------RLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILM 208 (437)
T ss_dssp ---ECSSEEEEEECCCTTCBHHHHHHTTTT---------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEE
T ss_pred ---eeCCEEEEEEecCCCCcHHHHHHHccC---------CCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeE
Confidence 566779999999999999999976321 689999999999999999999998 99999999999999
Q ss_pred cCCCCeEEcccCcccccccccCccccccccccccccccCccccC-----CCCCCcccchhhHHHHHHHHHhCCCCCCccc
Q 045798 833 DNDLSGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGL-----GSEVSTNGDVYSYGILLLEMVTAKKPTDVMF 907 (1008)
Q Consensus 833 ~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwslG~vl~elltG~~pf~~~~ 907 (1008)
+.++.+||+|||+|+........ .....+||+.|+|||++. ...++.++|||||||++|||++|+.||....
T Consensus 209 ~~~g~vkL~DFGla~~~~~~~~~---~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~ 285 (437)
T 4aw2_A 209 DMNGHIRLADFGSCLKLMEDGTV---QSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAES 285 (437)
T ss_dssp CTTSCEEECCCTTCEECCTTSCE---ECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred cCCCCEEEcchhhhhhcccCCCc---ccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCC
Confidence 99999999999999765433221 122356999999999986 5678999999999999999999999986421
Q ss_pred cCCccHHHHHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCC--CCCHHHHH
Q 045798 908 EGDLNLHNFARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQD--RMNMTNVV 985 (1008)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPt~~evl 985 (1008)
..+ ....... .. ....++... ...+.++.+++.+|+..+|++ ||+++|++
T Consensus 286 ~~~-~~~~i~~------------~~------------~~~~~p~~~---~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil 337 (437)
T 4aw2_A 286 LVE-TYGKIMN------------HK------------ERFQFPTQV---TDVSENAKDLIRRLICSREHRLGQNGIEDFK 337 (437)
T ss_dssp HHH-HHHHHHT------------HH------------HHCCCCSSC---CCSCHHHHHHHHTTSSCGGGCTTTTTTHHHH
T ss_pred hhH-HHHhhhh------------cc------------ccccCCccc---ccCCHHHHHHHHHHhcccccccCCCCHHHHh
Confidence 110 0000000 00 000000000 013455789999999988888 99999987
Q ss_pred H
Q 045798 986 H 986 (1008)
Q Consensus 986 ~ 986 (1008)
+
T Consensus 338 ~ 338 (437)
T 4aw2_A 338 K 338 (437)
T ss_dssp T
T ss_pred C
Confidence 6
No 133
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=9.6e-39 Score=345.84 Aligned_cols=251 Identities=21% Similarity=0.236 Sum_probs=204.0
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCceEE
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 762 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 762 (1008)
.++|++.+.||+|+||.||+|.+..+++.||+|++........+.+.+|++++++++||||+++++++ ..+...+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~~~~ 82 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETF-----EDNTDIY 82 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEE-----ECSSEEE
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEE-----ecCCeEE
Confidence 46799999999999999999999989999999999866556678899999999999999999999995 5567799
Q ss_pred EEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeee---cCCCCeE
Q 045798 763 IVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILL---DNDLSGH 839 (1008)
Q Consensus 763 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~k 839 (1008)
+||||+++++|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||++ +.++.+|
T Consensus 83 lv~e~~~~~~L~~~~~~~~----------~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~ 149 (277)
T 3f3z_A 83 LVMELCTGGELFERVVHKR----------VFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLK 149 (277)
T ss_dssp EEEECCCSCBHHHHHHHHC----------SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEE
T ss_pred EEEeccCCCcHHHHHHHcC----------CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEE
Confidence 9999999999999887543 689999999999999999999998 99999999999999 7889999
Q ss_pred EcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHHh
Q 045798 840 IGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFARM 919 (1008)
Q Consensus 840 L~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~~ 919 (1008)
|+|||.+........ .....||+.|+|||++.+. ++.++||||||+++|||++|+.||......+ ........
T Consensus 150 l~Dfg~~~~~~~~~~-----~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-~~~~~~~~ 222 (277)
T 3f3z_A 150 LIDFGLAARFKPGKM-----MRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDSE-VMLKIREG 222 (277)
T ss_dssp ECCCTTCEECCTTSC-----BCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHC
T ss_pred EEecccceeccCccc-----hhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHHH-HHHHHHhC
Confidence 999999986543322 1234589999999998664 8999999999999999999999986432110 00000000
Q ss_pred hCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 920 ALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 920 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
.. .. +.......+..+.+++.+||+.||++|||+.|+++
T Consensus 223 ~~------------~~----------------~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 223 TF------------TF----------------PEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp CC------------CC----------------CHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred CC------------CC----------------CchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00 00 00001123556899999999999999999999986
No 134
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=6e-39 Score=354.26 Aligned_cols=271 Identities=24% Similarity=0.350 Sum_probs=211.2
Q ss_pred hcCCCCCceEeeccCeeEEEEEE-----cCCCeEEEEEEeccccc-hhhHHHHHHHHHHhhc-CCCCceeeeeccccccc
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGAL-----DEDGIVVAIKVINLQCE-GASKSFMAECKALKNI-RHRNLVKVITSCSSIDF 755 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~-----~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 755 (1008)
.++|++.+.||+|+||.||+|.+ ..+++.||+|+++.... ...+.+.+|+++++++ +||||+++++++
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~----- 96 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGAC----- 96 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEE-----
Confidence 46899999999999999999985 34678999999975433 4457899999999999 999999999995
Q ss_pred cCCceEEEEEeccCCCChhcccccCCCCCC--------CcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCC
Q 045798 756 QGNDFKAIVYEYMPNGSLEKWLHPHAVPKR--------DKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKP 827 (1008)
Q Consensus 756 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~--------~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp 827 (1008)
..++..++||||+++|+|.+++........ .......+++..++.++.||+.||+|||+. +|+||||||
T Consensus 97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp 173 (313)
T 1t46_A 97 TIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAA 173 (313)
T ss_dssp CSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSG
T ss_pred ecCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCcc
Confidence 445668999999999999999976542100 001122589999999999999999999998 999999999
Q ss_pred CCeeecCCCCeEEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHh-CCCCCCcc
Q 045798 828 SNILLDNDLSGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVT-AKKPTDVM 906 (1008)
Q Consensus 828 ~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-G~~pf~~~ 906 (1008)
+||+++.++.+||+|||.+.......... ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||...
T Consensus 174 ~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~ 251 (313)
T 1t46_A 174 RNILLTHGRITKICDFGLARDIKNDSNYV--VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM 251 (313)
T ss_dssp GGEEEETTTEEEECCCGGGSCTTSCTTSE--ECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC
T ss_pred ceEEEcCCCCEEEccccccccccccccce--eccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcc
Confidence 99999999999999999998765443221 1223457889999999988899999999999999999999 99998643
Q ss_pred ccCCccHHHHHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 907 FEGDLNLHNFARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
.... ............ . .....+..+.+++.+||+.||.+|||+.|+++
T Consensus 252 ~~~~-~~~~~~~~~~~~--------~----------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 300 (313)
T 1t46_A 252 PVDS-KFYKMIKEGFRM--------L----------------------SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 300 (313)
T ss_dssp CSSH-HHHHHHHHTCCC--------C----------------------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred cchh-HHHHHhccCCCC--------C----------------------CcccCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 2211 111111100000 0 00123456899999999999999999999999
Q ss_pred HHHHHHHH
Q 045798 987 ELQSVKNI 994 (1008)
Q Consensus 987 ~L~~i~~~ 994 (1008)
.|+++...
T Consensus 301 ~L~~~~~~ 308 (313)
T 1t46_A 301 LIEKQISE 308 (313)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99887653
No 135
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=4e-39 Score=358.98 Aligned_cols=250 Identities=22% Similarity=0.278 Sum_probs=201.1
Q ss_pred HhcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEecccc---chhhHHHHHHHHHHhhc-CCCCceeeeeccccccccC
Q 045798 682 ATNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQC---EGASKSFMAECKALKNI-RHRNLVKVITSCSSIDFQG 757 (1008)
Q Consensus 682 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 757 (1008)
..++|++.+.||+|+||.||+|++..+++.||+|+++... ....+.+.+|.+++..+ +||+|++++++ +..
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~-----~~~ 92 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSC-----FQT 92 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEE-----EEC
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEE-----EEc
Confidence 3578999999999999999999998889999999997432 23456788999999988 89999999998 456
Q ss_pred CceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCC
Q 045798 758 NDFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLS 837 (1008)
Q Consensus 758 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 837 (1008)
.+..|+||||+++|+|.+++.... .+++..++.++.||+.||+|||+. +|+||||||+||+++.++.
T Consensus 93 ~~~~~lv~E~~~gg~L~~~l~~~~----------~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ 159 (353)
T 2i0e_A 93 MDRLYFVMEYVNGGDLMYHIQQVG----------RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGH 159 (353)
T ss_dssp SSEEEEEEECCCSCBHHHHHHHHS----------SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSC
T ss_pred CCEEEEEEeCCCCCcHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCc
Confidence 678999999999999999997543 689999999999999999999998 9999999999999999999
Q ss_pred eEEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHH
Q 045798 838 GHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFA 917 (1008)
Q Consensus 838 ~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~ 917 (1008)
+||+|||+++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ......
T Consensus 160 vkL~DFG~a~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~-~~~~~i- 233 (353)
T 2i0e_A 160 IKIADFGMCKENIWDGV----TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED-ELFQSI- 233 (353)
T ss_dssp EEECCCTTCBCCCCTTC----CBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHH-
T ss_pred EEEEeCCcccccccCCc----ccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHH-HHHHHH-
Confidence 99999999985332221 123456999999999999999999999999999999999999998642110 000000
Q ss_pred HhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCH-----HHHHH
Q 045798 918 RMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNM-----TNVVH 986 (1008)
Q Consensus 918 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~-----~evl~ 986 (1008)
..... .++ ...+.++.+++.+||+.||.+||++ +|+++
T Consensus 234 -----------~~~~~--------------~~p------~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~ 276 (353)
T 2i0e_A 234 -----------MEHNV--------------AYP------KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 276 (353)
T ss_dssp -----------HHCCC--------------CCC------TTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred -----------HhCCC--------------CCC------CCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 00000 000 1234567899999999999999964 56554
No 136
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=4.9e-39 Score=348.87 Aligned_cols=264 Identities=23% Similarity=0.381 Sum_probs=207.3
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcC---CCeEEEEEEecccc-chhhHHHHHHHHHHhhcCCCCceeeeeccccccccCC
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDE---DGIVVAIKVINLQC-EGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGN 758 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 758 (1008)
.++|.+.+.||+|+||.||+|.+.. ++..||+|+++... ....+.+.+|++++++++||||+++++++. .
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~------~ 84 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIE------E 84 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEEC------S
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEc------C
Confidence 5689999999999999999998753 34569999997543 345678999999999999999999999853 2
Q ss_pred ceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCe
Q 045798 759 DFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSG 838 (1008)
Q Consensus 759 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 838 (1008)
+..++||||+++++|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 85 ~~~~~v~e~~~~~~L~~~l~~~~~---------~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~ 152 (281)
T 3cc6_A 85 EPTWIIMELYPYGELGHYLERNKN---------SLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECV 152 (281)
T ss_dssp SSCEEEEECCTTCBHHHHHHHHTT---------TCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEE
T ss_pred CCCEEEEecCCCCCHHHHHHhccc---------cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcE
Confidence 346899999999999999975431 589999999999999999999998 99999999999999999999
Q ss_pred EEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHh-CCCCCCccccCCccHHHHH
Q 045798 839 HIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVT-AKKPTDVMFEGDLNLHNFA 917 (1008)
Q Consensus 839 kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-G~~pf~~~~~~~~~~~~~~ 917 (1008)
||+|||.+.......... .....+++.|+|||++.+..++.++||||||+++|||++ |+.||......+ .....
T Consensus 153 kl~Dfg~~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~--~~~~~ 227 (281)
T 3cc6_A 153 KLGDFGLSRYIEDEDYYK---ASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD--VIGVL 227 (281)
T ss_dssp EECCCCGGGCC------------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGG--HHHHH
T ss_pred EeCccCCCcccccccccc---cccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHH--HHHHH
Confidence 999999998665432211 222347889999999988889999999999999999998 999986432211 11110
Q ss_pred HhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHHHHHHHHHHHH
Q 045798 918 RMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHELQSVKNILLE 997 (1008)
Q Consensus 918 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~i~~~~~~ 997 (1008)
..... .+ ....++..+.+++.+||+.||++|||+.|+++.|+++.....+
T Consensus 228 ~~~~~--------------------------~~----~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~~ 277 (281)
T 3cc6_A 228 EKGDR--------------------------LP----KPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQMEKD 277 (281)
T ss_dssp HHTCC--------------------------CC----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHH
T ss_pred hcCCC--------------------------CC----CCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHhhhh
Confidence 00000 00 0011345688999999999999999999999999999887766
Q ss_pred HH
Q 045798 998 LE 999 (1008)
Q Consensus 998 ~~ 999 (1008)
+.
T Consensus 278 i~ 279 (281)
T 3cc6_A 278 IA 279 (281)
T ss_dssp HH
T ss_pred hh
Confidence 53
No 137
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=3.6e-39 Score=361.06 Aligned_cols=272 Identities=22% Similarity=0.349 Sum_probs=209.6
Q ss_pred HhcCCCCCceEeeccCeeEEEEEEc-----CCCeEEEEEEecccc-chhhHHHHHHHHHHhhcCCCCceeeeeccccccc
Q 045798 682 ATNGFSSTHLIGVGSFGCVYKGALD-----EDGIVVAIKVINLQC-EGASKSFMAECKALKNIRHRNLVKVITSCSSIDF 755 (1008)
Q Consensus 682 ~~~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 755 (1008)
..++|++.+.||+|+||.||+|++. .+++.||||+++... ....+.+.+|++++++++||||++++++|
T Consensus 45 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~----- 119 (343)
T 1luf_A 45 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVC----- 119 (343)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-----
T ss_pred cHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-----
Confidence 4678999999999999999999996 345899999997543 34457899999999999999999999995
Q ss_pred cCCceEEEEEeccCCCChhcccccCCCCCC--------------CcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCce
Q 045798 756 QGNDFKAIVYEYMPNGSLEKWLHPHAVPKR--------------DKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPIL 821 (1008)
Q Consensus 756 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~--------------~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iv 821 (1008)
..++..++||||+++|+|.+++........ .......+++.+++.++.||+.||+|||++ +|+
T Consensus 120 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~iv 196 (343)
T 1luf_A 120 AVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFV 196 (343)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCC
T ss_pred ccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---Cee
Confidence 445678999999999999999976432100 000013789999999999999999999998 999
Q ss_pred eccCCCCCeeecCCCCeEEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHh-CC
Q 045798 822 HCDLKPSNILLDNDLSGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVT-AK 900 (1008)
Q Consensus 822 H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-G~ 900 (1008)
||||||+||+++.++.+||+|||+++......... ......+|+.|+|||++.+..++.++|||||||++|||++ |.
T Consensus 197 H~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~ 274 (343)
T 1luf_A 197 HRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK--ADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGL 274 (343)
T ss_dssp CSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC------CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTC
T ss_pred cCCCCcceEEECCCCeEEEeecCCCcccccCcccc--ccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCC
Confidence 99999999999999999999999998654332111 1223457899999999988889999999999999999999 99
Q ss_pred CCCCccccCCccHHHHHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCC
Q 045798 901 KPTDVMFEGDLNLHNFARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMN 980 (1008)
Q Consensus 901 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt 980 (1008)
.||...... ..... +.+..... . ...++.++.+++.+||+.||.+|||
T Consensus 275 ~p~~~~~~~-----~~~~~--------~~~~~~~~-------------~------~~~~~~~l~~li~~~l~~~p~~Rps 322 (343)
T 1luf_A 275 QPYYGMAHE-----EVIYY--------VRDGNILA-------------C------PENCPLELYNLMRLCWSKLPADRPS 322 (343)
T ss_dssp CTTTTSCHH-----HHHHH--------HHTTCCCC-------------C------CTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred CcCCCCChH-----HHHHH--------HhCCCcCC-------------C------CCCCCHHHHHHHHHHcccCcccCCC
Confidence 998642110 01000 00000000 0 0123456899999999999999999
Q ss_pred HHHHHHHHHHHHHHH
Q 045798 981 MTNVVHELQSVKNIL 995 (1008)
Q Consensus 981 ~~evl~~L~~i~~~~ 995 (1008)
+.|+++.|+++....
T Consensus 323 ~~~~~~~L~~~~~~~ 337 (343)
T 1luf_A 323 FCSIHRILQRMCERA 337 (343)
T ss_dssp HHHHHHHHHHTTC--
T ss_pred HHHHHHHHHHHHhhh
Confidence 999999999876543
No 138
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.1e-38 Score=361.61 Aligned_cols=271 Identities=23% Similarity=0.382 Sum_probs=211.7
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcC-------CCeEEEEEEecccc-chhhHHHHHHHHHHhhc-CCCCceeeeeccccc
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDE-------DGIVVAIKVINLQC-EGASKSFMAECKALKNI-RHRNLVKVITSCSSI 753 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~-------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 753 (1008)
.++|.+.+.||+|+||.||+|++.. .+..||||+++... ....+.+.+|+++++++ +||||++++++|
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~--- 144 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGAC--- 144 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE---
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeee---
Confidence 4689999999999999999999742 34689999997543 34457899999999999 999999999995
Q ss_pred cccCCceEEEEEeccCCCChhcccccCCCCCCC------cccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCC
Q 045798 754 DFQGNDFKAIVYEYMPNGSLEKWLHPHAVPKRD------KEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKP 827 (1008)
Q Consensus 754 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~------~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp 827 (1008)
..++..++||||+++|+|.+++......... ......+++.+++.++.||+.||+|||+. +|+||||||
T Consensus 145 --~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp 219 (382)
T 3tt0_A 145 --TQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAA 219 (382)
T ss_dssp --CSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCG
T ss_pred --ccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCc
Confidence 4556689999999999999999765421100 01122699999999999999999999998 999999999
Q ss_pred CCeeecCCCCeEEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHh-CCCCCCcc
Q 045798 828 SNILLDNDLSGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVT-AKKPTDVM 906 (1008)
Q Consensus 828 ~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-G~~pf~~~ 906 (1008)
+||+++.++.+||+|||+++......... ......+|+.|+|||++.+..++.++|||||||++|||++ |..||...
T Consensus 220 ~NIll~~~~~~kL~DFG~a~~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~ 297 (382)
T 3tt0_A 220 RNVLVTEDNVMKIADFGLARDIHHIDYYK--KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 297 (382)
T ss_dssp GGEEECTTCCEEECSCSCCCCSSCCCTTC--CCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred ceEEEcCCCcEEEcccCcccccccccccc--cccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Confidence 99999999999999999998665432211 1223457889999999999999999999999999999999 99998632
Q ss_pred ccCCccHHHHHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 907 FEGDLNLHNFARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
.. ..... .+..... .. ....++.++.+++.+||+.||++|||++||++
T Consensus 298 ~~-----~~~~~---------~~~~~~~--------------~~----~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~ 345 (382)
T 3tt0_A 298 PV-----EELFK---------LLKEGHR--------------MD----KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 345 (382)
T ss_dssp CH-----HHHHH---------HHHTTCC--------------CC----CCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CH-----HHHHH---------HHHcCCC--------------CC----CCccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 11 01100 0000000 00 00123456899999999999999999999999
Q ss_pred HHHHHHHHH
Q 045798 987 ELQSVKNIL 995 (1008)
Q Consensus 987 ~L~~i~~~~ 995 (1008)
.|+++....
T Consensus 346 ~L~~~~~~~ 354 (382)
T 3tt0_A 346 DLDRIVALT 354 (382)
T ss_dssp HHHHHHHHS
T ss_pred HHHHHHHHH
Confidence 999987663
No 139
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=3.7e-39 Score=353.92 Aligned_cols=277 Identities=23% Similarity=0.385 Sum_probs=207.9
Q ss_pred hcCCCCCceEeeccCeeEEEEE----EcCCCeEEEEEEecccc-chhhHHHHHHHHHHhhcCCCCceeeeeccccccccC
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGA----LDEDGIVVAIKVINLQC-EGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQG 757 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~----~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 757 (1008)
.+.|++.+.||+|+||.||+|+ ...+++.||+|+++... ....+.+.+|++++++++||||+++++++.. ..
T Consensus 20 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~ 96 (302)
T 4e5w_A 20 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTE---DG 96 (302)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-----
T ss_pred hhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEec---CC
Confidence 3468999999999999999999 45688999999997443 3345789999999999999999999999653 33
Q ss_pred CceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCC
Q 045798 758 NDFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLS 837 (1008)
Q Consensus 758 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 837 (1008)
....++||||+++|+|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.
T Consensus 97 ~~~~~lv~e~~~~~~L~~~l~~~~~---------~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~ 164 (302)
T 4e5w_A 97 GNGIKLIMEFLPSGSLKEYLPKNKN---------KINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQ 164 (302)
T ss_dssp -CCEEEEEECCTTCBHHHHHHHHTT---------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTE
T ss_pred CceEEEEEEeCCCCcHHHHHHhccc---------cCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCC
Confidence 3568999999999999999954431 689999999999999999999998 9999999999999999999
Q ss_pred eEEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHH
Q 045798 838 GHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFA 917 (1008)
Q Consensus 838 ~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~ 917 (1008)
+||+|||.+.......... .......+|..|+|||++.+..++.++||||+|+++|||++|+.|+..... .+.
T Consensus 165 ~kl~Dfg~~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~ 237 (302)
T 4e5w_A 165 VKIGDFGLTKAIETDKEYY-TVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMA------LFL 237 (302)
T ss_dssp EEECCCTTCEECCTTCCEE-ECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHH------HHH
T ss_pred EEECcccccccccCCCcce-eccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhh------HHh
Confidence 9999999998765443221 222334588899999999888999999999999999999999998643211 111
Q ss_pred HhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHHHHHHH
Q 045798 918 RMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHELQSVK 992 (1008)
Q Consensus 918 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~i~ 992 (1008)
....+........ ............ +....++..+.+++.+||+.||.+|||+.|+++.|+++.
T Consensus 238 ~~~~~~~~~~~~~-------~~~~~~~~~~~~----~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 238 KMIGPTHGQMTVT-------RLVNTLKEGKRL----PCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp HHHCSCCGGGHHH-------HHHHHHHTTCCC----CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred hccCCcccccCHH-------HHHHHHhccCCC----CCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 1111110000000 000000000000 011234567899999999999999999999999999874
No 140
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=9.4e-39 Score=359.70 Aligned_cols=247 Identities=23% Similarity=0.260 Sum_probs=195.5
Q ss_pred CceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCceEEEEEecc
Q 045798 689 THLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDFKAIVYEYM 768 (1008)
Q Consensus 689 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 768 (1008)
.+.||+|+||.||+|.+..+|+.||+|+++.......+.+.+|++++++++||||+++++++ ...+..++||||+
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~-----~~~~~~~lv~E~~ 168 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAF-----ESKNDIVLVMEYV 168 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-----ECSSEEEEEEECC
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEE-----EECCEEEEEEeCC
Confidence 56899999999999999889999999999876556677899999999999999999999995 4566799999999
Q ss_pred CCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeee--cCCCCeEEcccCcc
Q 045798 769 PNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILL--DNDLSGHIGDFGLA 846 (1008)
Q Consensus 769 ~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll--~~~~~~kL~Dfg~a 846 (1008)
++++|.+++.... ..+++..++.++.||+.||+|||+. +|+||||||+||++ +.++.+||+|||++
T Consensus 169 ~~~~L~~~l~~~~---------~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a 236 (373)
T 2x4f_A 169 DGGELFDRIIDES---------YNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLA 236 (373)
T ss_dssp TTCEEHHHHHHTG---------GGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSC
T ss_pred CCCcHHHHHHhcC---------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCc
Confidence 9999999886542 1689999999999999999999998 99999999999999 56789999999999
Q ss_pred cccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCcchh
Q 045798 847 RFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFARMALPNQVM 926 (1008)
Q Consensus 847 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~ 926 (1008)
+........ ....||+.|+|||++.+..++.++|||||||++|||++|+.||...... ..........+.
T Consensus 237 ~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~-~~~~~i~~~~~~---- 306 (373)
T 2x4f_A 237 RRYKPREKL-----KVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDA-ETLNNILACRWD---- 306 (373)
T ss_dssp EECCTTCBC-----CCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHH-HHHHHHHHTCCC----
T ss_pred eecCCcccc-----ccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHhccCC----
Confidence 866443221 2245899999999999989999999999999999999999998643211 011111111000
Q ss_pred hhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 927 DIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 927 ~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
.. .......+.++.+++.+||+.||.+|||++|+++
T Consensus 307 --------~~----------------~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 307 --------LE----------------DEEFQDISEEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp --------SC----------------SGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred --------CC----------------hhhhccCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 00 0001123456899999999999999999999987
No 141
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=1.5e-38 Score=345.83 Aligned_cols=252 Identities=19% Similarity=0.273 Sum_probs=203.0
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEecccc--chhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCce
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQC--EGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDF 760 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 760 (1008)
.++|++.+.||+|+||.||+|.+..+++.||+|++.... ....+.+.+|++++++++||||+++++++ ..++.
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~ 79 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSI-----QEESF 79 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----ECSSE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEE-----EcCCE
Confidence 578999999999999999999999899999999997542 33456789999999999999999999994 55667
Q ss_pred EEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCC---
Q 045798 761 KAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLS--- 837 (1008)
Q Consensus 761 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~--- 837 (1008)
.++||||+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.
T Consensus 80 ~~~v~e~~~~~~l~~~~~~~~----------~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~ 146 (284)
T 3kk8_A 80 HYLVFDLVTGGELFEDIVARE----------FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAA 146 (284)
T ss_dssp EEEEECCCCSCBHHHHHHHHS----------SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCC
T ss_pred EEEEEecCCCCCHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCc
Confidence 899999999999998886543 689999999999999999999998 9999999999999976655
Q ss_pred eEEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHH
Q 045798 838 GHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFA 917 (1008)
Q Consensus 838 ~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~ 917 (1008)
+||+|||.+........ .....||+.|+|||++.+..++.++||||+|+++|+|++|+.||....... ......
T Consensus 147 ~kl~Dfg~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~-~~~~~~ 220 (284)
T 3kk8_A 147 VKLADFGLAIEVNDSEA-----WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR-LYAQIK 220 (284)
T ss_dssp EEECCCTTCEECCSSCB-----CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHH
T ss_pred EEEeeceeeEEcccCcc-----ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhH-HHHHHH
Confidence 99999999976543322 123458999999999999999999999999999999999999986421110 000000
Q ss_pred HhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 918 RMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 918 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
..... .+.+.....+.++.+++.+||+.||++|||++|+++
T Consensus 221 ~~~~~----------------------------~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (284)
T 3kk8_A 221 AGAYD----------------------------YPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALK 261 (284)
T ss_dssp HTCCC----------------------------CCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred hcccc----------------------------CCchhhcccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 00000 000001123456789999999999999999999987
No 142
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=5.2e-39 Score=355.03 Aligned_cols=278 Identities=24% Similarity=0.358 Sum_probs=210.0
Q ss_pred CCCCceEeeccCeeEEEEEE----cCCCeEEEEEEecccc-chhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCce
Q 045798 686 FSSTHLIGVGSFGCVYKGAL----DEDGIVVAIKVINLQC-EGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDF 760 (1008)
Q Consensus 686 y~~~~~lg~G~~g~Vy~~~~----~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 760 (1008)
|++.+.||+|+||+||+|.. ..+++.||||+++... ....+.+.+|++++++++||||+++++++.. .+...
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---~~~~~ 109 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCED---AGAAS 109 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE---TTTTE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEec---CCCce
Confidence 48999999999999988765 3478999999998543 3445779999999999999999999999653 33567
Q ss_pred EEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeEE
Q 045798 761 KAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGHI 840 (1008)
Q Consensus 761 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 840 (1008)
.++||||+++|+|.+++... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 110 ~~lv~e~~~~~~L~~~l~~~-----------~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl 175 (318)
T 3lxp_A 110 LQLVMEYVPLGSLRDYLPRH-----------SIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKI 175 (318)
T ss_dssp EEEEECCCTTCBHHHHGGGS-----------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEE
T ss_pred EEEEEecccCCcHHHHHhhC-----------CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEE
Confidence 89999999999999999754 588999999999999999999998 9999999999999999999999
Q ss_pred cccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHHhh
Q 045798 841 GDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFARMA 920 (1008)
Q Consensus 841 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~~~ 920 (1008)
+|||.+.......... .......+|..|+|||++.+..++.++||||||+++|||++|+.||........ ....
T Consensus 176 ~Dfg~a~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~-----~~~~ 249 (318)
T 3lxp_A 176 GDFGLAKAVPEGHEYY-RVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFL-----ELIG 249 (318)
T ss_dssp CCGGGCEECCTTCSEE-EC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHH-----HHHC
T ss_pred CCcccccccccccccc-ccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhh-----hhhc
Confidence 9999998765433221 122334588899999999988999999999999999999999999864321100 0000
Q ss_pred CCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHHHHHHHHHHHHH
Q 045798 921 LPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHELQSVKNILLEL 998 (1008)
Q Consensus 921 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~i~~~~~~~ 998 (1008)
......... ........... .+....++.++.+++.+||+.||++|||++|+++.|+++.+.+...
T Consensus 250 ~~~~~~~~~--------~~~~~~~~~~~----~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~~~ 315 (318)
T 3lxp_A 250 IAQGQMTVL--------RLTELLERGER----LPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQGQ 315 (318)
T ss_dssp SCCHHHHHH--------HHHHHHHTTCC----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHC-
T ss_pred ccccchhHH--------HHHHHHhcccC----CCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhccC
Confidence 000000000 00000000000 0011234567899999999999999999999999999998876543
No 143
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=1.7e-38 Score=347.71 Aligned_cols=268 Identities=22% Similarity=0.275 Sum_probs=207.9
Q ss_pred HhcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCceE
Q 045798 682 ATNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDFK 761 (1008)
Q Consensus 682 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 761 (1008)
..++|++.+.||+|+||.||+|++..+++.||||++.... ..+.+.+|+++++.++|++++..++.+. ..++..
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~----~~~~~~ 80 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCG----AEGDYN 80 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEE----EETTEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc--cchHHHHHHHHHHHhcCCCCCCeeeeec----CCCCce
Confidence 4578999999999999999999998899999999876432 2346889999999999988888777753 456778
Q ss_pred EEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeee---cCCCCe
Q 045798 762 AIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILL---DNDLSG 838 (1008)
Q Consensus 762 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~ 838 (1008)
++||||+ +++|.+++..... .+++..++.++.||+.||+|||++ +|+||||||+||++ +.++.+
T Consensus 81 ~lv~e~~-~~~L~~~~~~~~~---------~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~ 147 (296)
T 4hgt_A 81 VMVMELL-GPSLEDLFNFCSR---------KFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLV 147 (296)
T ss_dssp EEEEECC-CCBHHHHHHHTTS---------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCE
T ss_pred EEEEEcc-CCCHHHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeE
Confidence 9999999 9999999874321 689999999999999999999998 99999999999999 788999
Q ss_pred EEcccCcccccccccCcc---ccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCc--cH
Q 045798 839 HIGDFGLARFHQEVSNST---LSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDL--NL 913 (1008)
Q Consensus 839 kL~Dfg~a~~~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~--~~ 913 (1008)
||+|||.++......... ........||+.|+|||++.+..++.++|||||||++|||++|+.||........ ..
T Consensus 148 kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~ 227 (296)
T 4hgt_A 148 YIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKY 227 (296)
T ss_dssp EECCCTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHH
T ss_pred EEecCccceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhh
Confidence 999999998765443211 1122345699999999999999999999999999999999999999975322211 11
Q ss_pred HHHHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHHHHHHHH
Q 045798 914 HNFARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHELQSVKN 993 (1008)
Q Consensus 914 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~i~~ 993 (1008)
........+.. .+ ......+.++.+++.+||+.||++|||++||++.|+++..
T Consensus 228 ~~~~~~~~~~~------------~~---------------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~ 280 (296)
T 4hgt_A 228 ERISEKKMSTP------------IE---------------VLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFH 280 (296)
T ss_dssp HHHHHHHHHSC------------HH---------------HHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHH
T ss_pred hhhhcccccch------------hh---------------hhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHH
Confidence 11111000000 00 0001235578999999999999999999999999998876
Q ss_pred HH
Q 045798 994 IL 995 (1008)
Q Consensus 994 ~~ 995 (1008)
..
T Consensus 281 ~~ 282 (296)
T 4hgt_A 281 RQ 282 (296)
T ss_dssp HH
T ss_pred Hh
Confidence 54
No 144
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=2.4e-38 Score=346.42 Aligned_cols=267 Identities=22% Similarity=0.274 Sum_probs=210.4
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCceEE
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 762 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 762 (1008)
.++|++.+.||+|+||.||+|++..+++.||||++.... ..+.+.+|+++++.++|++++..+..+. ..++..+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~----~~~~~~~ 81 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCG----AEGDYNV 81 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS--SCCHHHHHHHHHHHHTTSTTCCCEEEEE----EETTEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc--chhHHHHHHHHHHHhhcCCCCCcccccc----CCCCceE
Confidence 578999999999999999999998899999999986542 2356899999999999988877776653 4566789
Q ss_pred EEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeee---cCCCCeE
Q 045798 763 IVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILL---DNDLSGH 839 (1008)
Q Consensus 763 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~k 839 (1008)
+||||+ +++|.+++..... .+++..++.++.|++.||+|||++ +|+||||||+||++ +.++.+|
T Consensus 82 lv~e~~-~~~L~~~~~~~~~---------~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~k 148 (296)
T 3uzp_A 82 MVMELL-GPSLEDLFNFCSR---------KFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVY 148 (296)
T ss_dssp EEEECC-CCBHHHHHHHTTT---------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEE
T ss_pred EEEEec-CCCHHHHHHhhcc---------CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEE
Confidence 999999 9999999974321 689999999999999999999998 99999999999999 4888999
Q ss_pred EcccCcccccccccCccc---cccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCC--ccHH
Q 045798 840 IGDFGLARFHQEVSNSTL---SSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGD--LNLH 914 (1008)
Q Consensus 840 L~Dfg~a~~~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~--~~~~ 914 (1008)
|+|||.+........... .......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ....
T Consensus 149 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~ 228 (296)
T 3uzp_A 149 IIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYE 228 (296)
T ss_dssp ECCCTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHH
T ss_pred EeeCCCcccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhh
Confidence 999999987654432111 11234569999999999999999999999999999999999999997532211 1111
Q ss_pred HHHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHHHHHHHHH
Q 045798 915 NFARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHELQSVKNI 994 (1008)
Q Consensus 915 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~i~~~ 994 (1008)
.......... .+ ......+.++.+++.+||+.||.+|||++||++.|+++...
T Consensus 229 ~~~~~~~~~~------------~~---------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 281 (296)
T 3uzp_A 229 RISEKKMSTP------------IE---------------VLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR 281 (296)
T ss_dssp HHHHHHHHSC------------HH---------------HHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHH
T ss_pred hhcccccCCc------------hH---------------HHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHh
Confidence 1111000000 00 00012346689999999999999999999999999988665
Q ss_pred H
Q 045798 995 L 995 (1008)
Q Consensus 995 ~ 995 (1008)
.
T Consensus 282 ~ 282 (296)
T 3uzp_A 282 Q 282 (296)
T ss_dssp T
T ss_pred c
Confidence 3
No 145
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=1.6e-38 Score=365.88 Aligned_cols=208 Identities=26% Similarity=0.317 Sum_probs=173.1
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccc--cchhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCce
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQ--CEGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDF 760 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 760 (1008)
.++|++.+.||+|+||.||+|.+..+++.||||+++.. .....+++.+|++++++++||||+++++++..........
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 56899999999999999999999999999999999743 2344578999999999999999999999976554444477
Q ss_pred EEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeEE
Q 045798 761 KAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGHI 840 (1008)
Q Consensus 761 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 840 (1008)
.|+||||++ ++|.+++.... .+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||
T Consensus 105 ~~lv~e~~~-~~L~~~~~~~~----------~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL 170 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKTPI----------FLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKV 170 (432)
T ss_dssp EEEEEECCS-EEHHHHHHSSC----------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEE
T ss_pred EEEEEecCC-cCHHHHHhccC----------CCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEE
Confidence 999999994 69999997643 689999999999999999999998 9999999999999999999999
Q ss_pred cccCcccccccccCcc------------------ccccccccccccccCcccc-CCCCCCcccchhhHHHHHHHHHhCCC
Q 045798 841 GDFGLARFHQEVSNST------------------LSSSVGVKGTIGYTAPEYG-LGSEVSTNGDVYSYGILLLEMVTAKK 901 (1008)
Q Consensus 841 ~Dfg~a~~~~~~~~~~------------------~~~~~~~~gt~~y~aPE~~-~~~~~~~~sDvwslG~vl~elltG~~ 901 (1008)
+|||+|+......... .......+||+.|+|||++ .+..++.++||||+||++|||++|..
T Consensus 171 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~ 250 (432)
T 3n9x_A 171 CDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQ 250 (432)
T ss_dssp CCCTTCEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCT
T ss_pred ccCCCcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccc
Confidence 9999998765432210 0112446799999999985 55679999999999999999999766
Q ss_pred CCC
Q 045798 902 PTD 904 (1008)
Q Consensus 902 pf~ 904 (1008)
||.
T Consensus 251 p~~ 253 (432)
T 3n9x_A 251 SHI 253 (432)
T ss_dssp TTC
T ss_pred ccc
Confidence 654
No 146
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=2e-38 Score=350.95 Aligned_cols=252 Identities=20% Similarity=0.261 Sum_probs=203.8
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccch------hhHHHHHHHHHHhhcCCCCceeeeecccccccc
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEG------ASKSFMAECKALKNIRHRNLVKVITSCSSIDFQ 756 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 756 (1008)
.++|++.+.||+|+||.||+|.+..+++.||+|+++..... ..+.+.+|++++++++||||+++++++ .
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~ 85 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVY-----E 85 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEE-----E
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEE-----e
Confidence 45799999999999999999999989999999999754321 356799999999999999999999994 5
Q ss_pred CCceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCC
Q 045798 757 GNDFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDL 836 (1008)
Q Consensus 757 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 836 (1008)
.++..++||||+++++|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++
T Consensus 86 ~~~~~~lv~e~~~~~~L~~~l~~~~----------~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~ 152 (321)
T 2a2a_A 86 NRTDVVLILELVSGGELFDFLAQKE----------SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKN 152 (321)
T ss_dssp CSSEEEEEECCCCSCBHHHHHHTCS----------CEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTT
T ss_pred cCCEEEEEEEcCCCCcHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCC
Confidence 5677999999999999999997643 689999999999999999999998 999999999999999887
Q ss_pred ----CeEEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCcc
Q 045798 837 ----SGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLN 912 (1008)
Q Consensus 837 ----~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~ 912 (1008)
.+||+|||.+........ .....||+.|+|||++.+..++.++|||||||++|+|++|+.||......
T Consensus 153 ~~~~~~kl~Dfg~~~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--- 224 (321)
T 2a2a_A 153 IPIPHIKLIDFGLAHEIEDGVE-----FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ--- 224 (321)
T ss_dssp SSSCCEEECCCTTCEECCTTCC-----CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH---
T ss_pred CCcCCEEEccCccceecCcccc-----ccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHH---
Confidence 799999999986654321 12345899999999999999999999999999999999999998642111
Q ss_pred HHHHHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 913 LHNFARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 913 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
..... +.........+ .....+..+.+++.+||+.||++|||++|+++
T Consensus 225 -~~~~~---------i~~~~~~~~~~----------------~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 225 -ETLAN---------ITSVSYDFDEE----------------FFSHTSELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp -HHHHH---------HHTTCCCCCHH----------------HHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred -HHHHH---------HHhcccccChh----------------hhcccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 00000 00000000000 00123456789999999999999999999987
No 147
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=2.1e-39 Score=379.18 Aligned_cols=258 Identities=24% Similarity=0.432 Sum_probs=209.2
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCceEE
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 762 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 762 (1008)
.++|++.+.||+|+||.||+|.+..++..||||+++... ...+.|.+|++++++++||||++++++| ...+..+
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~-----~~~~~~~ 292 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVC-----TREPPFY 292 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEE-----CSSSSCE
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEE-----ecCCcEE
Confidence 456888999999999999999998889999999997543 3457899999999999999999999996 4456689
Q ss_pred EEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeEEcc
Q 045798 763 IVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGHIGD 842 (1008)
Q Consensus 763 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 842 (1008)
+||||+++|+|.+++...... .+++..++.++.||+.||+|||+. +|+||||||+|||++.++.+||+|
T Consensus 293 lv~E~~~~g~L~~~l~~~~~~--------~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~D 361 (495)
T 1opk_A 293 IITEFMTYGNLLDYLRECNRQ--------EVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVAD 361 (495)
T ss_dssp EEEECCTTCBHHHHHHHSCTT--------TSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECC
T ss_pred EEEEccCCCCHHHHHHhcCcC--------CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEee
Confidence 999999999999999764321 689999999999999999999998 999999999999999999999999
Q ss_pred cCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHh-CCCCCCccccCCccHHHHHHhhC
Q 045798 843 FGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVT-AKKPTDVMFEGDLNLHNFARMAL 921 (1008)
Q Consensus 843 fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-G~~pf~~~~~~~~~~~~~~~~~~ 921 (1008)
||+++....... .......++..|+|||++.+..++.++|||||||++|||++ |..||...... ..
T Consensus 362 FG~a~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~--~~-------- 428 (495)
T 1opk_A 362 FGLSRLMTGDTY---TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QV-------- 428 (495)
T ss_dssp TTCEECCTTCCE---ECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GH--------
T ss_pred cccceeccCCce---eecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH--HH--------
Confidence 999986643221 11223446789999999988899999999999999999999 99998643211 00
Q ss_pred CcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHHHHHHH
Q 045798 922 PNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHELQSVK 992 (1008)
Q Consensus 922 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~i~ 992 (1008)
...+..... +. ....++..+.+++.+||+.||++|||+.||++.|+.+.
T Consensus 429 ----~~~~~~~~~--------------~~----~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~ 477 (495)
T 1opk_A 429 ----YELLEKDYR--------------ME----RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 477 (495)
T ss_dssp ----HHHHHTTCC--------------CC----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred ----HHHHHcCCC--------------CC----CCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence 011110000 00 01124567899999999999999999999999998873
No 148
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=2.4e-38 Score=342.58 Aligned_cols=254 Identities=22% Similarity=0.305 Sum_probs=204.9
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEecccc-chhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCceE
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQC-EGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDFK 761 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 761 (1008)
.++|++.+.||+|+||.||+|.+..+++.||+|+++... ....+.+.+|+.+++.++||||+++++++ ..++..
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~ 80 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR-----REGNIQ 80 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEE-----EETTEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEE-----EcCCEE
Confidence 467999999999999999999998899999999997443 34457899999999999999999999985 456678
Q ss_pred EEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeEEc
Q 045798 762 AIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGHIG 841 (1008)
Q Consensus 762 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 841 (1008)
++||||+++++|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~----------~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~ 147 (276)
T 2yex_A 81 YLFLEYCSGGELFDRIEPDI----------GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKIS 147 (276)
T ss_dssp EEEEECCTTEEGGGGSBTTT----------BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEEC
T ss_pred EEEEEecCCCcHHHHHhhcc----------CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEe
Confidence 99999999999999997543 689999999999999999999998 99999999999999999999999
Q ss_pred ccCcccccccccCccccccccccccccccCccccCCCCC-CcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHHhh
Q 045798 842 DFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEV-STNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFARMA 920 (1008)
Q Consensus 842 Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~~~ 920 (1008)
|||.+......... .......||+.|+|||++.+..+ +.++||||||+++|||++|+.||............+....
T Consensus 148 dfg~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~ 225 (276)
T 2yex_A 148 DFGLATVFRYNNRE--RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 225 (276)
T ss_dssp CCTTCEECEETTEE--CCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTC
T ss_pred eCCCccccCCCcch--hcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcc
Confidence 99999865433211 11223468999999999988765 7799999999999999999999975433222222211100
Q ss_pred CCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 921 LPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 921 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
.. .......+..+.+++.+||+.||.+|||++|+++
T Consensus 226 ~~------------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 226 TY------------------------------LNPWKKIDSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp TT------------------------------STTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred cc------------------------------cCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 00 0001123456789999999999999999999975
No 149
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=6.8e-39 Score=353.38 Aligned_cols=277 Identities=21% Similarity=0.258 Sum_probs=199.2
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccc--hhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCce
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCE--GASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDF 760 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 760 (1008)
.++|++.+.||+|+||.||+|.+..+++.||+|++..... ...+.+.+|++++++++||||+++++++ ..++.
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~~ 76 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVF-----RRKRR 76 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----EETTE
T ss_pred cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhhee-----ecCCe
Confidence 3679999999999999999999998899999999865432 3356788999999999999999999995 45667
Q ss_pred EEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeEE
Q 045798 761 KAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGHI 840 (1008)
Q Consensus 761 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 840 (1008)
.++||||+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 77 ~~lv~e~~~~~~l~~~~~~~~----------~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl 143 (311)
T 4agu_A 77 LHLVFEYCDHTVLHELDRYQR----------GVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKL 143 (311)
T ss_dssp EEEEEECCSEEHHHHHHHTSS----------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEE
T ss_pred EEEEEEeCCCchHHHHHhhhc----------CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEE
Confidence 999999999999999876543 689999999999999999999998 9999999999999999999999
Q ss_pred cccCcccccccccCccccccccccccccccCccccCC-CCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHHh
Q 045798 841 GDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLG-SEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFARM 919 (1008)
Q Consensus 841 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~~ 919 (1008)
+|||.+......... .....||..|+|||++.+ ..++.++||||+||++|+|++|+.||......+.. ......
T Consensus 144 ~Dfg~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-~~~~~~ 218 (311)
T 4agu_A 144 CDFGFARLLTGPSDY----YDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQL-YLIRKT 218 (311)
T ss_dssp CCCTTCEECC----------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH-HHHHHH
T ss_pred eeCCCchhccCcccc----cCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHHHH
Confidence 999999866533221 123458999999999876 56899999999999999999999998643221111 111000
Q ss_pred h--CCcchhhhhc-ccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 920 A--LPNQVMDIVD-PILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 920 ~--~~~~~~~~~d-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
. ..+....... ........ .................+..+.+++.+||+.||.+|||++|+++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 284 (311)
T 4agu_A 219 LGDLIPRHQQVFSTNQYFSGVK----IPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284 (311)
T ss_dssp HCSCCHHHHHHHHTCGGGTTCC----CCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred hcccccccccccccccccccCc----CCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 0 0000000000 00000000 00000000000001134556899999999999999999999986
No 150
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=7.3e-39 Score=355.01 Aligned_cols=260 Identities=23% Similarity=0.352 Sum_probs=203.1
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeE----EEEEEecccc-chhhHHHHHHHHHHhhcCCCCceeeeeccccccccC
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIV----VAIKVINLQC-EGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQG 757 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~----vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 757 (1008)
.++|++.+.||+|+||.||+|.+..+++. ||+|++.... ......+.+|+.++++++||||++++++|.
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~------ 85 (325)
T 3kex_A 12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP------ 85 (325)
T ss_dssp TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC------
T ss_pred HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc------
Confidence 35789999999999999999999777764 7788775332 233456889999999999999999999853
Q ss_pred CceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCC
Q 045798 758 NDFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLS 837 (1008)
Q Consensus 758 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 837 (1008)
++..++||||+++|+|.+++..... .+++..++.++.||+.||+|||+. +|+||||||+||+++.++.
T Consensus 86 ~~~~~~v~e~~~~~~L~~~l~~~~~---------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~ 153 (325)
T 3kex_A 86 GSSLQLVTQYLPLGSLLDHVRQHRG---------ALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQ 153 (325)
T ss_dssp BSSEEEEEECCTTCBSHHHHHSSGG---------GSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSC
T ss_pred CCccEEEEEeCCCCCHHHHHHHccc---------cCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCe
Confidence 3458999999999999999976421 688899999999999999999998 9999999999999999999
Q ss_pred eEEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHh-CCCCCCccccCCccHHHH
Q 045798 838 GHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVT-AKKPTDVMFEGDLNLHNF 916 (1008)
Q Consensus 838 ~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-G~~pf~~~~~~~~~~~~~ 916 (1008)
+||+|||+++.......... .....+|..|+|||++.+..++.++|||||||++|||++ |+.||...... .....
T Consensus 154 ~kl~Dfg~a~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~ 229 (325)
T 3kex_A 154 VQVADFGVADLLPPDDKQLL--YSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA--EVPDL 229 (325)
T ss_dssp EEECSCSGGGGSCCCTTCCC-------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTT--HHHHH
T ss_pred EEECCCCcccccCccccccc--ccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHH--HHHHH
Confidence 99999999987654432221 223457889999999998899999999999999999999 99998743211 11111
Q ss_pred HHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHHHHHHHHH
Q 045798 917 ARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHELQSVKNI 994 (1008)
Q Consensus 917 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~i~~~ 994 (1008)
...... .. ....++.++.+++.+||+.||.+|||+.|+++.|+++...
T Consensus 230 ~~~~~~----------~~--------------------~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~ 277 (325)
T 3kex_A 230 LEKGER----------LA--------------------QPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARD 277 (325)
T ss_dssp HHTTCB----------CC--------------------CCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTS
T ss_pred HHcCCC----------CC--------------------CCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 110000 00 0001233468899999999999999999999999887543
No 151
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=1e-38 Score=368.45 Aligned_cols=248 Identities=25% Similarity=0.362 Sum_probs=202.6
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEecccc---chhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCc
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQC---EGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGND 759 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 759 (1008)
.++|.+.+.||+|+||.||+|++..+|+.||||+++... ....+.+.+|+++++.++||||+++++++ ...+
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~-----~~~~ 89 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVI-----STPS 89 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEE-----ECSS
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEE-----EECC
Confidence 467999999999999999999998899999999996432 23346789999999999999999999994 4566
Q ss_pred eEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeE
Q 045798 760 FKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGH 839 (1008)
Q Consensus 760 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 839 (1008)
..++||||+++|+|.+++...+ .+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+|
T Consensus 90 ~~~lv~E~~~gg~L~~~l~~~~----------~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vk 156 (476)
T 2y94_A 90 DIFMVMEYVSGGELFDYICKNG----------RLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAK 156 (476)
T ss_dssp EEEEEEECCSSEEHHHHTTSSS----------SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEE
T ss_pred EEEEEEeCCCCCcHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeE
Confidence 7999999999999999997654 689999999999999999999998 999999999999999999999
Q ss_pred EcccCcccccccccCccccccccccccccccCccccCCCCC-CcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHH
Q 045798 840 IGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEV-STNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFAR 918 (1008)
Q Consensus 840 L~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~ 918 (1008)
|+|||++........ .....||+.|+|||++.+..+ +.++||||+||++|||++|+.||...... ....
T Consensus 157 L~DFG~a~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~-----~~~~ 226 (476)
T 2y94_A 157 IADFGLSNMMSDGEF-----LRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVP-----TLFK 226 (476)
T ss_dssp ECCCSSCEECCTTCC-----BCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSH-----HHHH
T ss_pred EEeccchhhcccccc-----ccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHH-----HHHH
Confidence 999999986644221 123469999999999988765 68999999999999999999998642110 0000
Q ss_pred hhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 919 MALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 919 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
.+.+.... .+ ...+.++.+++.+||+.||.+|||++|+++
T Consensus 227 --------~i~~~~~~--------------~p------~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 227 --------KICDGIFY--------------TP------QYLNPSVISLLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp --------HHHTTCCC--------------CC------TTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred --------HHhcCCcC--------------CC------ccCCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence 00000000 00 012345789999999999999999999987
No 152
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=2.8e-38 Score=362.10 Aligned_cols=253 Identities=21% Similarity=0.231 Sum_probs=193.6
Q ss_pred HhcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEecccc--------chhhHHHHHHHHHHhhcCCCCceeeeeccccc
Q 045798 682 ATNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQC--------EGASKSFMAECKALKNIRHRNLVKVITSCSSI 753 (1008)
Q Consensus 682 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 753 (1008)
..++|.+.+.||+|+||.||+|.+..+++.||||++.... ......+.+|++++++++||||+++++++.
T Consensus 133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-- 210 (419)
T 3i6u_A 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-- 210 (419)
T ss_dssp HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE--
T ss_pred hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe--
Confidence 4678999999999999999999999999999999986432 112235889999999999999999999842
Q ss_pred cccCCceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeec
Q 045798 754 DFQGNDFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLD 833 (1008)
Q Consensus 754 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~ 833 (1008)
.+..++||||+++|+|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++
T Consensus 211 ----~~~~~lv~e~~~~g~L~~~l~~~~----------~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~ 273 (419)
T 3i6u_A 211 ----AEDYYIVLELMEGGELFDKVVGNK----------RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLS 273 (419)
T ss_dssp ----SSEEEEEEECCTTCBGGGGTSSSC----------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEES
T ss_pred ----cCceEEEEEcCCCCcHHHHHhccC----------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEe
Confidence 334799999999999999987654 789999999999999999999998 999999999999997
Q ss_pred CC---CCeEEcccCcccccccccCccccccccccccccccCccccCC---CCCCcccchhhHHHHHHHHHhCCCCCCccc
Q 045798 834 ND---LSGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLG---SEVSTNGDVYSYGILLLEMVTAKKPTDVMF 907 (1008)
Q Consensus 834 ~~---~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDvwslG~vl~elltG~~pf~~~~ 907 (1008)
.+ +.+||+|||+|+....... .....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||....
T Consensus 274 ~~~~~~~~kl~DFG~a~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~ 348 (419)
T 3i6u_A 274 SQEEDCLIKITDFGHSKILGETSL-----MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 348 (419)
T ss_dssp SSSSSCCEEECCSSTTTSCC----------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCS
T ss_pred cCCCcceEEEeecccceecCCCcc-----ccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCc
Confidence 54 4599999999987643321 223568999999999864 568889999999999999999999997432
Q ss_pred cCCccHHHHHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 908 EGDLNLHNFARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
............... ..++ .....+..+.+++.+||+.||++|||++|+++
T Consensus 349 ~~~~~~~~i~~~~~~------------~~~~----------------~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 349 TQVSLKDQITSGKYN------------FIPE----------------VWAEVSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp SSCCHHHHHHTTCCC------------CCHH----------------HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred chHHHHHHHhcCCCC------------CCch----------------hhcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 221111111110000 0000 01123556899999999999999999999987
No 153
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=7.9e-39 Score=346.86 Aligned_cols=249 Identities=22% Similarity=0.350 Sum_probs=200.4
Q ss_pred HhcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEecccc---chhhHHHHHHHHHHhhcCCCCceeeeeccccccccCC
Q 045798 682 ATNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQC---EGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGN 758 (1008)
Q Consensus 682 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 758 (1008)
+.++|++.+.||+|+||.||+|.+..+++.||+|++.... ......+.+|+.++++++||||+++++++ .+.
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~ 81 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF-----HDA 81 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEE-----ECS
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheE-----ecC
Confidence 3568999999999999999999999899999999986432 22346789999999999999999999995 556
Q ss_pred ceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCe
Q 045798 759 DFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSG 838 (1008)
Q Consensus 759 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 838 (1008)
+..++||||+++++|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 82 ~~~~lv~e~~~~~~l~~~l~~~~----------~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~ 148 (279)
T 3fdn_A 82 TRVYLILEYAPLGTVYRELQKLS----------KFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGEL 148 (279)
T ss_dssp SEEEEEECCCTTEEHHHHHHHHS----------SCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCE
T ss_pred CEEEEEEecCCCCcHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCE
Confidence 77999999999999999987543 689999999999999999999997 99999999999999999999
Q ss_pred EEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHH
Q 045798 839 HIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFAR 918 (1008)
Q Consensus 839 kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~ 918 (1008)
||+|||++........ ....|++.|+|||.+.+..++.++||||||+++|+|++|+.||......+ .......
T Consensus 149 ~l~Dfg~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~ 221 (279)
T 3fdn_A 149 KIADFGWSVHAPSSRR------TDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE-TYKRISR 221 (279)
T ss_dssp EECSCCEESCC--------------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHHH
T ss_pred EEEeccccccCCcccc------cccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHH-HHHHHHh
Confidence 9999999865433221 23458999999999999999999999999999999999999986321100 0000000
Q ss_pred hhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHH
Q 045798 919 MALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHE 987 (1008)
Q Consensus 919 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 987 (1008)
... .++ ...+..+.+++.+||+.||.+|||++|+++.
T Consensus 222 ~~~--------------------------~~~------~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 222 VEF--------------------------TFP------DFVTEGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp TCC--------------------------CCC------TTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred CCC--------------------------CCC------CcCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 000 000 1134457899999999999999999999874
No 154
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=8.1e-39 Score=353.96 Aligned_cols=251 Identities=22% Similarity=0.270 Sum_probs=180.0
Q ss_pred CceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhhcC-CCCceeeeeccccccccCCceEEEEEec
Q 045798 689 THLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKNIR-HRNLVKVITSCSSIDFQGNDFKAIVYEY 767 (1008)
Q Consensus 689 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~~lv~e~ 767 (1008)
.+.||+|+||.||+|.+..+++.||||++... ....+.+|+.+++.+. ||||+++++++ .++...++||||
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~-----~~~~~~~lv~e~ 87 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVF-----HDQLHTFLVMEL 87 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEE-----ECSSEEEEEECC
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEE-----EcCCEEEEEEEc
Confidence 47899999999999999989999999999643 4467889999999996 99999999994 566779999999
Q ss_pred cCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCC---CeEEcccC
Q 045798 768 MPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDL---SGHIGDFG 844 (1008)
Q Consensus 768 ~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~---~~kL~Dfg 844 (1008)
+++|+|.+++.... .+++.++..++.||+.||+|||+. +|+||||||+||+++.++ .+||+|||
T Consensus 88 ~~~~~L~~~l~~~~----------~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg 154 (325)
T 3kn6_A 88 LNGGELFERIKKKK----------HFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFG 154 (325)
T ss_dssp CCSCBHHHHHHHCS----------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCT
T ss_pred cCCCcHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccc
Confidence 99999999997654 789999999999999999999998 999999999999997765 89999999
Q ss_pred cccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCcc
Q 045798 845 LARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFARMALPNQ 924 (1008)
Q Consensus 845 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~~~~~~~ 924 (1008)
+++........ .....||+.|+|||++.+..++.++|||||||++|+|++|+.||........ ...
T Consensus 155 ~a~~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~----------~~~ 220 (325)
T 3kn6_A 155 FARLKPPDNQP----LKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLT----------CTS 220 (325)
T ss_dssp TCEECCC--------------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-----------------CCC
T ss_pred cceecCCCCCc----ccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccc----------ccc
Confidence 99865433221 2234589999999999999999999999999999999999999974322100 000
Q ss_pred hhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 925 VMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 925 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
..+......... ...........+.++.+++.+||+.||.+|||++|+++
T Consensus 221 ~~~~~~~i~~~~------------~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 221 AVEIMKKIKKGD------------FSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp HHHHHHHHTTTC------------CCCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred HHHHHHHHHcCC------------CCCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 011111111000 00011112234567899999999999999999999873
No 155
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=1.5e-38 Score=350.80 Aligned_cols=275 Identities=21% Similarity=0.368 Sum_probs=201.1
Q ss_pred HHhcCCCCCceEeeccCeeEEEEEEcC---CCeEEEEEEecccc--chhhHHHHHHHHHHhhcCCCCceeeeeccccccc
Q 045798 681 KATNGFSSTHLIGVGSFGCVYKGALDE---DGIVVAIKVINLQC--EGASKSFMAECKALKNIRHRNLVKVITSCSSIDF 755 (1008)
Q Consensus 681 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 755 (1008)
...++|.+.+.||+|+||.||+|.+.. +++.||+|+++... ....+.+.+|++++++++||||+++++++.....
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 110 (313)
T 3brb_A 31 IDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSS 110 (313)
T ss_dssp CCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC---
T ss_pred cCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccc
Confidence 345789999999999999999998854 45689999997542 3445679999999999999999999999765443
Q ss_pred cCCceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCC
Q 045798 756 QGNDFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDND 835 (1008)
Q Consensus 756 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 835 (1008)
......++||||+++|+|.+++....... ....+++..++.++.||+.||+|||+. +|+||||||+||+++.+
T Consensus 111 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~----~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~ 183 (313)
T 3brb_A 111 QGIPKPMVILPFMKYGDLHTYLLYSRLET----GPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDD 183 (313)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHTTBTT----SCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTT
T ss_pred cCCcccEEEEecccCCCHHHHHHHhhhhc----CCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCC
Confidence 33345799999999999999985432111 012689999999999999999999998 99999999999999999
Q ss_pred CCeEEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHh-CCCCCCccccCCccHH
Q 045798 836 LSGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVT-AKKPTDVMFEGDLNLH 914 (1008)
Q Consensus 836 ~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-G~~pf~~~~~~~~~~~ 914 (1008)
+.+||+|||++.......... ......+++.|+|||.+.+..++.++||||||+++|||++ |..||....... ..
T Consensus 184 ~~~kl~Dfg~~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~--~~ 259 (313)
T 3brb_A 184 MTVCVADFGLSKKIYSGDYYR--QGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHE--MY 259 (313)
T ss_dssp SCEEECSCSCC------------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG--HH
T ss_pred CcEEEeecCcceecccccccC--cccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHH--HH
Confidence 999999999998654432111 1223347889999999999999999999999999999999 888886432111 10
Q ss_pred HHHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHHHHHHHHH
Q 045798 915 NFARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHELQSVKNI 994 (1008)
Q Consensus 915 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~i~~~ 994 (1008)
......... . ....++..+.+++.+||+.||.+|||+.++++.|+++.+.
T Consensus 260 ~~~~~~~~~------------------------~------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~ 309 (313)
T 3brb_A 260 DYLLHGHRL------------------------K------QPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLES 309 (313)
T ss_dssp HHHHTTCCC------------------------C------CBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHcCCCC------------------------C------CCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 000000000 0 0012345689999999999999999999999999998876
Q ss_pred HH
Q 045798 995 LL 996 (1008)
Q Consensus 995 ~~ 996 (1008)
..
T Consensus 310 lp 311 (313)
T 3brb_A 310 LP 311 (313)
T ss_dssp C-
T ss_pred cC
Confidence 44
No 156
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=7.5e-39 Score=354.00 Aligned_cols=281 Identities=21% Similarity=0.279 Sum_probs=215.2
Q ss_pred CHHHHHHHhcCCCCCceEeeccCeeEEEEEE-----cCCCeEEEEEEeccccc-hhhHHHHHHHHHHhhc-CCCCceeee
Q 045798 675 SYKSLLKATNGFSSTHLIGVGSFGCVYKGAL-----DEDGIVVAIKVINLQCE-GASKSFMAECKALKNI-RHRNLVKVI 747 (1008)
Q Consensus 675 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-----~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~ 747 (1008)
.........++|++.+.||+|+||.||+|.+ ..+++.||||+++.... ...+.+.+|+++++++ +||||++++
T Consensus 18 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 97 (316)
T 2xir_A 18 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 97 (316)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred cccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEE
Confidence 4444455578999999999999999999985 34678999999975433 3456799999999999 799999999
Q ss_pred eccccccccCCceEEEEEeccCCCChhcccccCCCCCCC------cccccccCHHHHHHHHHHHHHHHHHHhhCCCCCce
Q 045798 748 TSCSSIDFQGNDFKAIVYEYMPNGSLEKWLHPHAVPKRD------KEIEIKLTLLQRISIAIDVASALDYLHHHCQEPIL 821 (1008)
Q Consensus 748 ~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~------~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iv 821 (1008)
+++. ..+...++||||+++|+|.+++......... ......+++..++.++.|++.||+|||+. +|+
T Consensus 98 ~~~~----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~ 170 (316)
T 2xir_A 98 GACT----KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCI 170 (316)
T ss_dssp EEEC----CTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCC
T ss_pred EEEe----cCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---Ccc
Confidence 9864 3345589999999999999999765421000 00011389999999999999999999998 999
Q ss_pred eccCCCCCeeecCCCCeEEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHh-CC
Q 045798 822 HCDLKPSNILLDNDLSGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVT-AK 900 (1008)
Q Consensus 822 H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-G~ 900 (1008)
||||||+||+++.++.+||+|||.++......... ......+|+.|+|||++.+..++.++|||||||++|||++ |.
T Consensus 171 H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~ 248 (316)
T 2xir_A 171 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV--RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGA 248 (316)
T ss_dssp CSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSE--EETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred cccCccceEEECCCCCEEECCCccccccccCccce--eccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999998664432221 1223457889999999988899999999999999999998 99
Q ss_pred CCCCccccCCccHHHHHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCC
Q 045798 901 KPTDVMFEGDLNLHNFARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMN 980 (1008)
Q Consensus 901 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt 980 (1008)
.||............... ..... . ....+.++.+++.+||+.||.+|||
T Consensus 249 ~p~~~~~~~~~~~~~~~~-~~~~~------------------------~------~~~~~~~l~~li~~~l~~dp~~Rps 297 (316)
T 2xir_A 249 SPYPGVKIDEEFCRRLKE-GTRMR------------------------A------PDYTTPEMYQTMLDCWHGEPSQRPT 297 (316)
T ss_dssp CSSTTCCCSHHHHHHHHH-TCCCC------------------------C------CTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred CCCcccchhHHHHHHhcc-CccCC------------------------C------CCCCCHHHHHHHHHHcCCChhhCcC
Confidence 998643211111111100 00000 0 0113446789999999999999999
Q ss_pred HHHHHHHHHHHHHHH
Q 045798 981 MTNVVHELQSVKNIL 995 (1008)
Q Consensus 981 ~~evl~~L~~i~~~~ 995 (1008)
+.|+++.|+.+....
T Consensus 298 ~~ell~~L~~~~~~~ 312 (316)
T 2xir_A 298 FSELVEHLGNLLQAN 312 (316)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhh
Confidence 999999999987653
No 157
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=4.4e-39 Score=359.89 Aligned_cols=270 Identities=19% Similarity=0.252 Sum_probs=202.9
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcC---CCeEEEEEEeccccch-----------hhHHHHHHHHHHhhcCCCCceeeee
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDE---DGIVVAIKVINLQCEG-----------ASKSFMAECKALKNIRHRNLVKVIT 748 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~h~niv~~~~ 748 (1008)
.++|++.+.||+|+||.||+|.+.. ++..||+|++...... ....+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 4679999999999999999999976 7789999998754321 1234678889999999999999999
Q ss_pred ccccccccCCceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCC
Q 045798 749 SCSSIDFQGNDFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPS 828 (1008)
Q Consensus 749 ~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~ 828 (1008)
++... +.+....++||||+ +++|.+++.... .+++.+++.++.||+.||+|||+. +|+||||||+
T Consensus 116 ~~~~~-~~~~~~~~lv~e~~-~~~L~~~l~~~~----------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~ 180 (345)
T 2v62_A 116 SGLTE-FKGRSYRFMVMERL-GIDLQKISGQNG----------TFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAA 180 (345)
T ss_dssp EEEEE-SSSCEEEEEEEECE-EEEHHHHCBGGG----------BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGG
T ss_pred ccccc-cCCCcEEEEEEecc-CCCHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHH
Confidence 96542 23467899999999 999999997653 689999999999999999999998 9999999999
Q ss_pred CeeecCCC--CeEEcccCcccccccccCcc---ccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCC
Q 045798 829 NILLDNDL--SGHIGDFGLARFHQEVSNST---LSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPT 903 (1008)
Q Consensus 829 NIll~~~~--~~kL~Dfg~a~~~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf 903 (1008)
||+++.++ .+||+|||+++......... ........||+.|+|||++.+..++.++|||||||++|||++|+.||
T Consensus 181 NIll~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf 260 (345)
T 2v62_A 181 NLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPW 260 (345)
T ss_dssp GEEEESSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred HEEEccCCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCc
Confidence 99999887 99999999998765432211 11123456999999999999999999999999999999999999999
Q ss_pred CccccCCccHHHHHHh---hCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCC
Q 045798 904 DVMFEGDLNLHNFARM---ALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMN 980 (1008)
Q Consensus 904 ~~~~~~~~~~~~~~~~---~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt 980 (1008)
................ ..+....... .....+.++.+++.+||+.||++|||
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~l~~li~~~l~~dp~~Rps 315 (345)
T 2v62_A 261 EQNLKDPVAVQTAKTNLLDELPQSVLKWA-------------------------PSGSSCCEIAQFLVCAHSLAYDEKPN 315 (345)
T ss_dssp GGGTTCHHHHHHHHHHHHHTTTHHHHHHS-------------------------CTTSCCHHHHHHHHHHHTCCTTCCCC
T ss_pred cccccccHHHHHHHHhhcccccHHHHhhc-------------------------cccccHHHHHHHHHHHhhcCcccCCC
Confidence 6432221111111100 0010000000 00024557899999999999999999
Q ss_pred HHHHHHHHHHHH
Q 045798 981 MTNVVHELQSVK 992 (1008)
Q Consensus 981 ~~evl~~L~~i~ 992 (1008)
+++|++.|+++.
T Consensus 316 ~~~l~~~L~~~~ 327 (345)
T 2v62_A 316 YQALKKILNPHG 327 (345)
T ss_dssp HHHHHHHHCTTC
T ss_pred HHHHHHHHhccC
Confidence 999999998653
No 158
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.1e-38 Score=362.92 Aligned_cols=207 Identities=25% Similarity=0.382 Sum_probs=166.3
Q ss_pred HhcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccc--cchhhHHHHHHHHHHhhcC-CCCceeeeeccccccccCC
Q 045798 682 ATNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQ--CEGASKSFMAECKALKNIR-HRNLVKVITSCSSIDFQGN 758 (1008)
Q Consensus 682 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~ 758 (1008)
..++|++.+.||+|+||.||+|.+..+++.||||++... .......+.+|+.+++++. ||||+++++++.. .+.
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~---~~~ 83 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRA---DND 83 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC---TTS
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEec---CCC
Confidence 467899999999999999999999999999999998643 2345567889999999996 9999999999653 344
Q ss_pred ceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCe
Q 045798 759 DFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSG 838 (1008)
Q Consensus 759 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 838 (1008)
...|+||||++ ++|.+++... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+
T Consensus 84 ~~~~lv~e~~~-~~L~~~~~~~-----------~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~ 148 (388)
T 3oz6_A 84 RDVYLVFDYME-TDLHAVIRAN-----------ILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHV 148 (388)
T ss_dssp SCEEEEEECCS-EEHHHHHHHT-----------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCE
T ss_pred CEEEEEecccC-cCHHHHHHcC-----------CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCE
Confidence 56899999996 6999988653 688999999999999999999998 99999999999999999999
Q ss_pred EEcccCcccccccccCc-----------------cccccccccccccccCccccCC-CCCCcccchhhHHHHHHHHHhCC
Q 045798 839 HIGDFGLARFHQEVSNS-----------------TLSSSVGVKGTIGYTAPEYGLG-SEVSTNGDVYSYGILLLEMVTAK 900 (1008)
Q Consensus 839 kL~Dfg~a~~~~~~~~~-----------------~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltG~ 900 (1008)
||+|||+|+........ ........+||+.|+|||++.+ ..++.++||||+||++|||++|+
T Consensus 149 kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~ 228 (388)
T 3oz6_A 149 KVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228 (388)
T ss_dssp EECCCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred EecCCcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCC
Confidence 99999999865431110 0111233569999999999876 67899999999999999999999
Q ss_pred CCCCcc
Q 045798 901 KPTDVM 906 (1008)
Q Consensus 901 ~pf~~~ 906 (1008)
+||...
T Consensus 229 ~pf~~~ 234 (388)
T 3oz6_A 229 PIFPGS 234 (388)
T ss_dssp CSCCCS
T ss_pred CCCCCC
Confidence 999643
No 159
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=2.8e-39 Score=374.73 Aligned_cols=257 Identities=26% Similarity=0.422 Sum_probs=206.3
Q ss_pred HhcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCceE
Q 045798 682 ATNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDFK 761 (1008)
Q Consensus 682 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 761 (1008)
..++|++.+.||+|+||.||+|.+. ++..||||+++... ...+.+.+|++++++++||||+++++++. .+..
T Consensus 186 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~------~~~~ 257 (454)
T 1qcf_A 186 PRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT------KEPI 257 (454)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEET-TTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC------SSSC
T ss_pred chHHeEEEEEcccCCceEEEEEEEC-CccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe------CCcc
Confidence 3567889999999999999999996 67889999998643 34678999999999999999999999853 3457
Q ss_pred EEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeEEc
Q 045798 762 AIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGHIG 841 (1008)
Q Consensus 762 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 841 (1008)
++||||+++|+|.+++.... ...+++..++.++.||+.||+|||+. +|+||||||+|||++.++.+||+
T Consensus 258 ~lv~e~~~~g~L~~~l~~~~--------~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~ 326 (454)
T 1qcf_A 258 YIITEFMAKGSLLDFLKSDE--------GSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIA 326 (454)
T ss_dssp EEEECCCTTCBHHHHHHSHH--------HHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEEC
T ss_pred EEEEeecCCCcHHHHHHhcc--------CCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEe
Confidence 99999999999999997542 12578899999999999999999998 99999999999999999999999
Q ss_pred ccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHh-CCCCCCccccCCccHHHHHHhh
Q 045798 842 DFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVT-AKKPTDVMFEGDLNLHNFARMA 920 (1008)
Q Consensus 842 Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-G~~pf~~~~~~~~~~~~~~~~~ 920 (1008)
|||+++...... ........++..|+|||++.+..++.++|||||||++|||++ |+.||......+ ......
T Consensus 327 DFG~a~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~--~~~~i~-- 399 (454)
T 1qcf_A 327 DFGLARVIEDNE---YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE--VIRALE-- 399 (454)
T ss_dssp STTGGGGBCCHH---HHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH--HHHHHH--
T ss_pred eCCCceEcCCCc---eeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHH--HHHHHH--
Confidence 999998654321 111223346789999999988899999999999999999999 999986421110 000000
Q ss_pred CCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHHHHHHH
Q 045798 921 LPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHELQSVK 992 (1008)
Q Consensus 921 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~i~ 992 (1008)
.. .+++. ...++.++.+++.+||+.||++|||+++|++.|+.+.
T Consensus 400 ----------~~--------------~~~~~----~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~ 443 (454)
T 1qcf_A 400 ----------RG--------------YRMPR----PENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFY 443 (454)
T ss_dssp ----------HT--------------CCCCC----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred ----------cC--------------CCCCC----CCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHH
Confidence 00 00000 1134567899999999999999999999999998764
No 160
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=5.4e-39 Score=356.75 Aligned_cols=243 Identities=23% Similarity=0.348 Sum_probs=201.6
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccc--------hhhHHHHHHHHHHhhcCCCCceeeeecccccc
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCE--------GASKSFMAECKALKNIRHRNLVKVITSCSSID 754 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 754 (1008)
.++|++.+.||+|+||.||+|++..+++.||||+++.... ...+.+.+|++++++++||||+++++++
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~---- 98 (335)
T 3dls_A 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIF---- 98 (335)
T ss_dssp HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEE----
T ss_pred ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEE----
Confidence 5689999999999999999999999999999999975421 1334678899999999999999999994
Q ss_pred ccCCceEEEEEeccCCC-ChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeec
Q 045798 755 FQGNDFKAIVYEYMPNG-SLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLD 833 (1008)
Q Consensus 755 ~~~~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~ 833 (1008)
...+..++||||+.+| +|.+++.... .+++..++.++.||+.||+|||+. +|+||||||+||+++
T Consensus 99 -~~~~~~~lv~e~~~~g~~l~~~~~~~~----------~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~ 164 (335)
T 3dls_A 99 -ENQGFFQLVMEKHGSGLDLFAFIDRHP----------RLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIA 164 (335)
T ss_dssp -ECSSEEEEEEECCTTSCBHHHHHHTCC----------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC
T ss_pred -eeCCEEEEEEEeCCCCccHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEc
Confidence 5667799999999777 9999997654 689999999999999999999998 999999999999999
Q ss_pred CCCCeEEcccCcccccccccCccccccccccccccccCccccCCCCC-CcccchhhHHHHHHHHHhCCCCCCccccCCcc
Q 045798 834 NDLSGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEV-STNGDVYSYGILLLEMVTAKKPTDVMFEGDLN 912 (1008)
Q Consensus 834 ~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~vl~elltG~~pf~~~~~~~~~ 912 (1008)
.++.+||+|||+++........ ....||+.|+|||++.+..+ +.++|||||||++|||++|+.||....+.
T Consensus 165 ~~~~~kL~Dfg~a~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--- 236 (335)
T 3dls_A 165 EDFTIKLIDFGSAAYLERGKLF-----YTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET--- 236 (335)
T ss_dssp TTSCEEECCCTTCEECCTTCCB-----CEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG---
T ss_pred CCCcEEEeecccceECCCCCce-----eccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH---
Confidence 9999999999999866543221 23458999999999988876 78999999999999999999998642110
Q ss_pred HHHHHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHH
Q 045798 913 LHNFARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHE 987 (1008)
Q Consensus 913 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 987 (1008)
....... ....+.++.+++.+||+.||++|||++|+++.
T Consensus 237 ----------------~~~~~~~--------------------~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 237 ----------------VEAAIHP--------------------PYLVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp ----------------TTTCCCC--------------------SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred ----------------HhhccCC--------------------CcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000000 00123457899999999999999999999874
No 161
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=9.4e-39 Score=345.46 Aligned_cols=247 Identities=24% Similarity=0.339 Sum_probs=180.1
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEecccc---chhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCc
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQC---EGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGND 759 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 759 (1008)
.++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|++++++++||||+++++++ ..++
T Consensus 12 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~ 86 (275)
T 2eue_A 12 IGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVI-----KSKD 86 (275)
T ss_dssp CCCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEE-----ECSS
T ss_pred ccceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEE-----ecCC
Confidence 368999999999999999999998899999999997532 23356789999999999999999999995 4566
Q ss_pred eEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeE
Q 045798 760 FKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGH 839 (1008)
Q Consensus 760 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 839 (1008)
..++||||+ ++++.+++.... .+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 87 ~~~lv~e~~-~~~l~~~~~~~~----------~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~k 152 (275)
T 2eue_A 87 EIIMVIEYA-GNELFDYIVQRD----------KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVK 152 (275)
T ss_dssp CEEEEEECC-CEEHHHHHHTSS----------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEE
T ss_pred eEEEEehhc-CCcHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEE
Confidence 799999999 778888886553 689999999999999999999998 999999999999999999999
Q ss_pred EcccCcccccccccCccccccccccccccccCccccCCCCC-CcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHH
Q 045798 840 IGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEV-STNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFAR 918 (1008)
Q Consensus 840 L~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~ 918 (1008)
|+|||.+........ .....||+.|+|||++.+..+ +.++||||+||++|||++|+.||...... .......
T Consensus 153 l~Dfg~~~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~~ 225 (275)
T 2eue_A 153 IADFGLSNIMTDGNF-----LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP--VLFKNIS 225 (275)
T ss_dssp ECCSSCC--------------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHH
T ss_pred EeecccceeccCccc-----ccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHH
Confidence 999999986543321 122458999999999888765 78999999999999999999998642110 0000000
Q ss_pred hhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 919 MALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 919 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
.. .. ..+ ...+..+.+++.+||+.||.+|||++|+++
T Consensus 226 ~~-----------~~--------------~~~------~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 226 NG-----------VY--------------TLP------KFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp HT-----------CC--------------CCC------TTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hC-----------CC--------------CCC------ccCCHHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 00 00 000 113445789999999999999999999976
No 162
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=1e-38 Score=354.12 Aligned_cols=281 Identities=24% Similarity=0.381 Sum_probs=213.0
Q ss_pred hcCCCCCceEeeccCeeEEEEEE----cCCCeEEEEEEeccccchhhHHHHHHHHHHhhcCCCCceeeeeccccccccCC
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGAL----DEDGIVVAIKVINLQCEGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGN 758 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~----~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 758 (1008)
.++|++.+.||+|+||.||+|+. ..+++.||||++........+.+.+|++++++++||||+++++++.. .+.
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---~~~ 116 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYS---AGR 116 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC------
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEe---cCC
Confidence 45689999999999999999984 55789999999987666677889999999999999999999998643 233
Q ss_pred ceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCe
Q 045798 759 DFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSG 838 (1008)
Q Consensus 759 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 838 (1008)
...++||||+++++|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 117 ~~~~lv~e~~~~~~L~~~l~~~~~---------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~ 184 (326)
T 2w1i_A 117 RNLKLIMEYLPYGSLRDYLQKHKE---------RIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRV 184 (326)
T ss_dssp -CCEEEECCCTTCBHHHHHHHSTT---------SSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEE
T ss_pred CceEEEEECCCCCCHHHHHHhccc---------CCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcE
Confidence 468999999999999999976531 589999999999999999999998 99999999999999999999
Q ss_pred EEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHH
Q 045798 839 HIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFAR 918 (1008)
Q Consensus 839 kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~ 918 (1008)
||+|||++.......... .......++..|+|||.+.+..++.++||||||+++|||++|..||..... .+..
T Consensus 185 kL~Dfg~~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~------~~~~ 257 (326)
T 2w1i_A 185 KIGDFGLTKVLPQDKEYY-KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPA------EFMR 257 (326)
T ss_dssp EECCCTTCEECCSSCSEE-ECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHH------HHHH
T ss_pred EEecCcchhhcccccccc-ccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHH------HHHH
Confidence 999999998765443221 112234477889999999888899999999999999999999999753211 1111
Q ss_pred hhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHHHHHHHHHH
Q 045798 919 MALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHELQSVKNIL 995 (1008)
Q Consensus 919 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~i~~~~ 995 (1008)
............. ..........+. +....++.++.+++.+||+.||++|||+.||++.|+++++..
T Consensus 258 ~~~~~~~~~~~~~------~~~~~~~~~~~~----~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~l 324 (326)
T 2w1i_A 258 MIGNDKQGQMIVF------HLIELLKNNGRL----PRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQM 324 (326)
T ss_dssp HHCTTCCTHHHHH------HHHHHHHTTCCC----CCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred hhccccchhhhHH------HHHHHhhcCCCC----CCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHh
Confidence 0000000000000 000000000000 011234567899999999999999999999999999998764
No 163
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=8.9e-39 Score=353.49 Aligned_cols=270 Identities=19% Similarity=0.229 Sum_probs=208.8
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCceEE
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 762 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 762 (1008)
.++|++.+.||+|+||.||+|.+..+++.||||++........+.+.+|++++++++||||+++++++... .......+
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~~~~~~ 106 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRE-RGAKHEAW 106 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEE-ETTEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEec-cCCCceeE
Confidence 46799999999999999999999889999999999766666678899999999999999999999986531 12345789
Q ss_pred EEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeEEcc
Q 045798 763 IVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGHIGD 842 (1008)
Q Consensus 763 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 842 (1008)
+||||+++|+|.+++...... ...+++.+++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 107 lv~e~~~~~~L~~~l~~~~~~------~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~d 177 (317)
T 2buj_A 107 LLLPFFKRGTLWNEIERLKDK------GNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMD 177 (317)
T ss_dssp EEEECCTTCBHHHHHHHHHTT------TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECC
T ss_pred EEEEeCCCCcHHHHHHHHHhc------CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEe
Confidence 999999999999998753211 11689999999999999999999998 999999999999999999999999
Q ss_pred cCcccccccccCcc-----ccccccccccccccCccccCCCC---CCcccchhhHHHHHHHHHhCCCCCCccccCCccHH
Q 045798 843 FGLARFHQEVSNST-----LSSSVGVKGTIGYTAPEYGLGSE---VSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLH 914 (1008)
Q Consensus 843 fg~a~~~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~---~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~ 914 (1008)
||.+.......... ........||+.|+|||++.+.. ++.++|||||||++|||++|+.||...........
T Consensus 178 fg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~ 257 (317)
T 2buj_A 178 LGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVA 257 (317)
T ss_dssp CSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHH
T ss_pred cCcchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhh
Confidence 99987553321110 00112234799999999987654 68899999999999999999999864322211111
Q ss_pred HHHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHHHHHHH
Q 045798 915 NFARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHELQSVK 992 (1008)
Q Consensus 915 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~i~ 992 (1008)
...... .. . +.....+..+.+++.+||+.||.+|||++|+++.|+.+.
T Consensus 258 ~~~~~~------------~~--------------~----~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~ 305 (317)
T 2buj_A 258 LAVQNQ------------LS--------------I----PQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQ 305 (317)
T ss_dssp HHHHCC----------------------------C----CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTC
T ss_pred HHhhcc------------CC--------------C----CccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcC
Confidence 111100 00 0 000123456899999999999999999999999998764
No 164
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=2e-38 Score=360.68 Aligned_cols=256 Identities=19% Similarity=0.230 Sum_probs=194.4
Q ss_pred hcCCCCC-ceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhhc-CCCCceeeeeccccccccCCce
Q 045798 683 TNGFSST-HLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKNI-RHRNLVKVITSCSSIDFQGNDF 760 (1008)
Q Consensus 683 ~~~y~~~-~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~ 760 (1008)
.++|.+. +.||+|+||+||+|.+..+++.||||+++.. ..+.+|++++.+. +||||+++++++... +.+...
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~-~~~~~~ 133 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENL-YAGRKC 133 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEE-ETTEEE
T ss_pred cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeec-ccCCcE
Confidence 4567776 6899999999999999989999999998632 4577888887554 899999999986431 234567
Q ss_pred EEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecC---CCC
Q 045798 761 KAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDN---DLS 837 (1008)
Q Consensus 761 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~ 837 (1008)
.|+||||+++|+|.+++...... .+++..++.|+.||+.||+|||+. +|+||||||+|||++. ++.
T Consensus 134 ~~lv~E~~~gg~L~~~l~~~~~~--------~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~ 202 (400)
T 1nxk_A 134 LLIVMECLDGGELFSRIQDRGDQ--------AFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAI 202 (400)
T ss_dssp EEEEEECCCSEEHHHHHHCC-----------CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCC
T ss_pred EEEEEEeCCCCcHHHHHHHhCCC--------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCcc
Confidence 89999999999999999765321 689999999999999999999998 9999999999999987 789
Q ss_pred eEEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCcc--HHH
Q 045798 838 GHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLN--LHN 915 (1008)
Q Consensus 838 ~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~--~~~ 915 (1008)
+||+|||+++....... .....||+.|+|||++.+..++.++|||||||++|||++|+.||......... ...
T Consensus 203 ~kl~DFG~a~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~ 277 (400)
T 1nxk_A 203 LKLTDFGFAKETTSHNS-----LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT 277 (400)
T ss_dssp EEECCCTTCEECC----------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHH
T ss_pred EEEEecccccccCCCCc-----cccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHH
Confidence 99999999986543221 22346899999999999999999999999999999999999999753221110 100
Q ss_pred HHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHH
Q 045798 916 FARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHE 987 (1008)
Q Consensus 916 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 987 (1008)
..... .. ....+....++.++.+++.+||+.||++|||++|+++.
T Consensus 278 ~i~~~-----------~~----------------~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 278 RIRMG-----------QY----------------EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp HHHHT-----------CC----------------CCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred HHHcC-----------cc----------------cCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 00000 00 00000111245568999999999999999999999873
No 165
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=1.2e-38 Score=346.94 Aligned_cols=274 Identities=25% Similarity=0.312 Sum_probs=197.4
Q ss_pred cCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccc--hhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCceE
Q 045798 684 NGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCE--GASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDFK 761 (1008)
Q Consensus 684 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 761 (1008)
++|++.+.||+|+||.||+|++ .+++.||+|+++.... ...+.+.+|++++++++||||+++++++ ..++..
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~ 75 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI-----HTKKRL 75 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEE-----ECSSCE
T ss_pred ccchhhhhcccCCCEEEEEEEc-CCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEE-----ccCCeE
Confidence 5799999999999999999998 5789999999975432 2346789999999999999999999995 456679
Q ss_pred EEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeEEc
Q 045798 762 AIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGHIG 841 (1008)
Q Consensus 762 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 841 (1008)
++||||++ ++|.+++..... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 76 ~lv~e~~~-~~l~~~~~~~~~---------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~ 142 (288)
T 1ob3_A 76 VLVFEHLD-QDLKKLLDVCEG---------GLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIA 142 (288)
T ss_dssp EEEEECCS-EEHHHHHHTSTT---------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEEC
T ss_pred EEEEEecC-CCHHHHHHhccc---------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEe
Confidence 99999996 499998875431 688999999999999999999998 99999999999999999999999
Q ss_pred ccCcccccccccCccccccccccccccccCccccCCC-CCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHHhh
Q 045798 842 DFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGS-EVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFARMA 920 (1008)
Q Consensus 842 Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~~~ 920 (1008)
|||.++........ .....||+.|+|||++.+. .++.++||||+||++|||++|+.||......+. ........
T Consensus 143 Dfg~~~~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~ 217 (288)
T 1ob3_A 143 DFGLARAFGIPVRK----YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQ-LMRIFRIL 217 (288)
T ss_dssp CTTHHHHHCC-------------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHH
T ss_pred ECccccccCccccc----cccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHH
Confidence 99999865432211 1234589999999998764 589999999999999999999999874322111 11111111
Q ss_pred CCcchhh--hhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 921 LPNQVMD--IVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 921 ~~~~~~~--~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
....... .....-...+. ....... +........+.++.+++.+||+.||++|||++|+++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 218 GTPNSKNWPNVTELPKYDPN----FTVYEPL-PWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp CCCCTTTSTTGGGSTTCCTT----CCCCCCC-CGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCCChhhchhhhcccccccc----cccccCc-cHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 1000000 00000000000 0000000 000001123456789999999999999999999875
No 166
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.8e-39 Score=356.23 Aligned_cols=267 Identities=26% Similarity=0.455 Sum_probs=203.1
Q ss_pred cCCCCCceEeeccCeeEEEEEEcCC----CeEEEEEEecccc-chhhHHHHHHHHHHhhcCCCCceeeeeccccccccCC
Q 045798 684 NGFSSTHLIGVGSFGCVYKGALDED----GIVVAIKVINLQC-EGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGN 758 (1008)
Q Consensus 684 ~~y~~~~~lg~G~~g~Vy~~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 758 (1008)
++|++.+.||+|+||.||+|.+..+ +..||||+++... ......+.+|++++++++||||+++++++ ...
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~ 118 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVI-----SKY 118 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-----CSS
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEE-----ecC
Confidence 5677889999999999999998644 3469999997543 33456799999999999999999999995 456
Q ss_pred ceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCe
Q 045798 759 DFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSG 838 (1008)
Q Consensus 759 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 838 (1008)
+..++||||+++|+|.+++..... .+++.+++.++.||+.||+|||+. +|+||||||+||+++.++.+
T Consensus 119 ~~~~lv~e~~~~~~L~~~l~~~~~---------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~ 186 (333)
T 1mqb_A 119 KPMMIITEYMENGALDKFLREKDG---------EFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVC 186 (333)
T ss_dssp SSEEEEEECCTTEEHHHHHHHTTT---------CSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCE
T ss_pred CCcEEEEeCCCCCcHHHHHHhCCC---------CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcE
Confidence 679999999999999999975421 689999999999999999999998 99999999999999999999
Q ss_pred EEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHh-CCCCCCccccCCccHHHHH
Q 045798 839 HIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVT-AKKPTDVMFEGDLNLHNFA 917 (1008)
Q Consensus 839 kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-G~~pf~~~~~~~~~~~~~~ 917 (1008)
||+|||.++.......... ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... ...
T Consensus 187 kl~Dfg~~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~-----~~~ 260 (333)
T 1mqb_A 187 KVSDFGLSRVLEDDPEATY-TTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH-----EVM 260 (333)
T ss_dssp EECCCCC------------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----HHH
T ss_pred EECCCCcchhhcccccccc-ccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHH-----HHH
Confidence 9999999987654322211 1222346789999999998899999999999999999999 99998632110 000
Q ss_pred HhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHHHHHHHHHHHH
Q 045798 918 RMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHELQSVKNILLE 997 (1008)
Q Consensus 918 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~i~~~~~~ 997 (1008)
. .+.... +.+ ....++..+.+++.+||+.||++||++.|+++.|+++......
T Consensus 261 ~---------~~~~~~--------------~~~----~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~~ 313 (333)
T 1mqb_A 261 K---------AINDGF--------------RLP----TPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPDS 313 (333)
T ss_dssp H---------HHHTTC--------------CCC----CCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGGG
T ss_pred H---------HHHCCC--------------cCC----CcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcchh
Confidence 0 000000 000 0012345689999999999999999999999999998876554
Q ss_pred HHH
Q 045798 998 LET 1000 (1008)
Q Consensus 998 ~~~ 1000 (1008)
.++
T Consensus 314 ~~~ 316 (333)
T 1mqb_A 314 LKT 316 (333)
T ss_dssp GGS
T ss_pred hhh
Confidence 443
No 167
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.5e-38 Score=349.70 Aligned_cols=263 Identities=19% Similarity=0.227 Sum_probs=199.3
Q ss_pred HhcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccc---hhhHHHHHHHHHHhhcCCCCceeeeeccccccccCC
Q 045798 682 ATNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCE---GASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGN 758 (1008)
Q Consensus 682 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 758 (1008)
..++|++.+.||+|+||.||+|.+..+++.||+|+++.... ...+.+.+|+.++++++||||+++++++ ..+
T Consensus 32 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~-----~~~ 106 (309)
T 2h34_A 32 QFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFG-----EID 106 (309)
T ss_dssp --CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-----EET
T ss_pred EeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEE-----eeC
Confidence 35789999999999999999999988999999999975422 2346799999999999999999999995 446
Q ss_pred ceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCe
Q 045798 759 DFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSG 838 (1008)
Q Consensus 759 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 838 (1008)
+..++||||+++++|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 107 ~~~~lv~e~~~~~~L~~~l~~~~----------~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~ 173 (309)
T 2h34_A 107 GQLYVDMRLINGVDLAAMLRRQG----------PLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFA 173 (309)
T ss_dssp TEEEEEEECCCCEEHHHHHHHHC----------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCE
T ss_pred CeEEEEEEecCCCCHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCE
Confidence 67999999999999999997543 689999999999999999999998 99999999999999999999
Q ss_pred EEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHH
Q 045798 839 HIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFAR 918 (1008)
Q Consensus 839 kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~ 918 (1008)
||+|||++......... ......|++.|+|||++.+..++.++||||||+++|||++|+.||...... .......
T Consensus 174 kl~Dfg~~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~~ 248 (309)
T 2h34_A 174 YLVDFGIASATTDEKLT---QLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS--VMGAHIN 248 (309)
T ss_dssp EECSCCC-------------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH--HHHHHHH
T ss_pred EEecCccCccccccccc---cccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH--HHHHHhc
Confidence 99999999865443211 122345899999999999999999999999999999999999998643111 0000000
Q ss_pred hhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCC-CHHHHHHHHHHHHHHH
Q 045798 919 MALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRM-NMTNVVHELQSVKNIL 995 (1008)
Q Consensus 919 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-t~~evl~~L~~i~~~~ 995 (1008)
...+. ........+.++.+++.+||+.||++|| +++++++.|+.+....
T Consensus 249 ~~~~~----------------------------~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~ 298 (309)
T 2h34_A 249 QAIPR----------------------------PSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATA 298 (309)
T ss_dssp SCCCC----------------------------GGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC--
T ss_pred cCCCC----------------------------ccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhh
Confidence 00000 0000112345678999999999999999 9999999998875443
No 168
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.6e-38 Score=342.17 Aligned_cols=257 Identities=24% Similarity=0.371 Sum_probs=206.8
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCceEE
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 762 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 762 (1008)
.++|++.+.||+|+||.||+|.+. +++.||+|+++.... ..+.+.+|++++++++||||+++++++ ..++..+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~ 79 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVC-----LEQAPIC 79 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEE-----CSSSSCE
T ss_pred hhheeeeeEecCCCceeEEEEEec-CCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEE-----ccCCCeE
Confidence 457899999999999999999996 788999999976533 346799999999999999999999995 4456689
Q ss_pred EEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeEEcc
Q 045798 763 IVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGHIGD 842 (1008)
Q Consensus 763 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 842 (1008)
+||||+++++|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 80 lv~e~~~~~~L~~~~~~~~~---------~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~d 147 (267)
T 3t9t_A 80 LVTEFMEHGCLSDYLRTQRG---------LFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSD 147 (267)
T ss_dssp EEECCCTTCBHHHHHHHTTT---------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECC
T ss_pred EEEeCCCCCcHHHHHhhCcc---------cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEcc
Confidence 99999999999999976431 589999999999999999999998 999999999999999999999999
Q ss_pred cCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHh-CCCCCCccccCCccHHHHHHhhC
Q 045798 843 FGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVT-AKKPTDVMFEGDLNLHNFARMAL 921 (1008)
Q Consensus 843 fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-G~~pf~~~~~~~~~~~~~~~~~~ 921 (1008)
||.+....... ........++..|+|||++.+..++.++||||||+++|+|++ |+.||...... ..........
T Consensus 148 fg~~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~~i~~~~ 222 (267)
T 3t9t_A 148 FGMTRFVLDDQ---YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS--EVVEDISTGF 222 (267)
T ss_dssp TTGGGGBCCHH---HHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHHHHTTC
T ss_pred ccccccccccc---ccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHH--HHHHHHhcCC
Confidence 99998654321 111223457889999999988889999999999999999999 89998642110 0000000000
Q ss_pred CcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHHHHHHHH
Q 045798 922 PNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHELQSVKN 993 (1008)
Q Consensus 922 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~i~~ 993 (1008)
. . . .....+..+.+++.+||+.||++|||+.|+++.|+++.+
T Consensus 223 ~--------~--------------------~--~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (267)
T 3t9t_A 223 R--------L--------------------Y--KPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 264 (267)
T ss_dssp C--------C--------------------C--CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred c--------C--------------------C--CCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 0 0 0 000124567899999999999999999999999999875
No 169
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=2.4e-38 Score=356.63 Aligned_cols=282 Identities=22% Similarity=0.231 Sum_probs=208.8
Q ss_pred HhcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEecccc-chhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCce
Q 045798 682 ATNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQC-EGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDF 760 (1008)
Q Consensus 682 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 760 (1008)
..++|++.+.||+|+||.||+|.+..+++.||||++.... ....+.+.+|++++++++||||+++++++..........
T Consensus 25 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 104 (364)
T 3qyz_A 25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD 104 (364)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred ccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccce
Confidence 3568999999999999999999999899999999997433 334578999999999999999999999987655555667
Q ss_pred EEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeEE
Q 045798 761 KAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGHI 840 (1008)
Q Consensus 761 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 840 (1008)
.++||||++ |+|.+++... .+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||
T Consensus 105 ~~iv~e~~~-~~L~~~l~~~-----------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl 169 (364)
T 3qyz_A 105 VYIVQDLME-TDLYKLLKTQ-----------HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKI 169 (364)
T ss_dssp EEEEEECCS-EEHHHHHHHC-----------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEE
T ss_pred EEEEEcccC-cCHHHHHHhC-----------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEE
Confidence 999999995 6999988643 689999999999999999999998 9999999999999999999999
Q ss_pred cccCcccccccccCccccccccccccccccCccccCC-CCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHHh
Q 045798 841 GDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLG-SEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFARM 919 (1008)
Q Consensus 841 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~~ 919 (1008)
+|||.++.......... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||......+ ........
T Consensus 170 ~Dfg~a~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~i~~~ 247 (364)
T 3qyz_A 170 CDFGLARVADPDHDHTG-FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD-QLNHILGI 247 (364)
T ss_dssp CCCTTCEECCGGGCBCC-TTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGG-HHHHHHHH
T ss_pred EeCcceEecCCCCCccc-cccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHH-HHHHHHHH
Confidence 99999986654332211 1233569999999998654 458999999999999999999999996532221 11111111
Q ss_pred hCCcchhhhhcccccCchHHhhhhhhhhhccc--cc---hhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 920 ALPNQVMDIVDPILRNDEEILASTDKCRRMQT--GI---NSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 920 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~--~~---~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
...... +.+........ .. .....+. .. ......+.++.+++.+||+.||.+|||++|+++
T Consensus 248 ~~~~~~-~~~~~~~~~~~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 313 (364)
T 3qyz_A 248 LGSPSQ-EDLNCIINLKA--RN---YLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313 (364)
T ss_dssp HCSCCH-HHHHTCCCHHH--HH---HHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hCCCCH-HHHHHhhhhhH--HH---HHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 111111 10100000000 00 0000000 00 000123456899999999999999999999986
No 170
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=7.3e-39 Score=363.34 Aligned_cols=262 Identities=21% Similarity=0.245 Sum_probs=203.8
Q ss_pred HHHHHHHhcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEecccc---chhhHHHHHHHHHHhhcCCCCceeeeecccc
Q 045798 676 YKSLLKATNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQC---EGASKSFMAECKALKNIRHRNLVKVITSCSS 752 (1008)
Q Consensus 676 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 752 (1008)
+.+.....++|++.+.||+|+||.||+|+.+.+++.||+|+++... ....+.+.+|.+++..++||||++++++
T Consensus 53 ~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~--- 129 (412)
T 2vd5_A 53 LKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFA--- 129 (412)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEE---
T ss_pred hhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEE---
Confidence 3344445689999999999999999999999899999999996431 2234568899999999999999999998
Q ss_pred ccccCCceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeee
Q 045798 753 IDFQGNDFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILL 832 (1008)
Q Consensus 753 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll 832 (1008)
+.+++..|+||||+++|+|.+++...+. .+++..++.++.||+.||+|||+. +|+||||||+|||+
T Consensus 130 --~~~~~~~~lVmE~~~gg~L~~~l~~~~~---------~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl 195 (412)
T 2vd5_A 130 --FQDENYLYLVMEYYVGGDLLTLLSKFGE---------RIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILL 195 (412)
T ss_dssp --EECSSEEEEEECCCCSCBHHHHHHHHSS---------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEE
T ss_pred --EeeCCEEEEEEcCCCCCcHHHHHHhcCC---------CCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeee
Confidence 4567789999999999999999975421 689999999999999999999998 99999999999999
Q ss_pred cCCCCeEEcccCcccccccccCccccccccccccccccCccccC-------CCCCCcccchhhHHHHHHHHHhCCCCCCc
Q 045798 833 DNDLSGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGL-------GSEVSTNGDVYSYGILLLEMVTAKKPTDV 905 (1008)
Q Consensus 833 ~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~sDvwslG~vl~elltG~~pf~~ 905 (1008)
+.++++||+|||+++........ ......||+.|+|||++. +..++.++|||||||++|||++|+.||..
T Consensus 196 d~~g~vkL~DFGla~~~~~~~~~---~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~ 272 (412)
T 2vd5_A 196 DRCGHIRLADFGSCLKLRADGTV---RSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYA 272 (412)
T ss_dssp CTTSCEEECCCTTCEECCTTSCE---ECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred cCCCCEEEeechhheeccCCCcc---ccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCC
Confidence 99999999999999866443221 122356999999999986 45789999999999999999999999864
Q ss_pred cccCCccHHHHHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCC---CCHH
Q 045798 906 MFEGDLNLHNFARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDR---MNMT 982 (1008)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R---Pt~~ 982 (1008)
....+ .+....... ..+ .++. .....+.++.+++.+||. +|.+| |+++
T Consensus 273 ~~~~~-~~~~i~~~~----------~~~--------------~~p~---~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ 323 (412)
T 2vd5_A 273 DSTAE-TYGKIVHYK----------EHL--------------SLPL---VDEGVPEEARDFIQRLLC-PPETRLGRGGAG 323 (412)
T ss_dssp SSHHH-HHHHHHTHH----------HHC--------------CCC-------CCCHHHHHHHHTTSS-CGGGCTTTTTHH
T ss_pred CCHHH-HHHHHHhcc----------cCc--------------CCCc---cccCCCHHHHHHHHHHcC-ChhhcCCCCCHH
Confidence 21110 000000000 000 0000 001234567999999999 99998 5888
Q ss_pred HHHH
Q 045798 983 NVVH 986 (1008)
Q Consensus 983 evl~ 986 (1008)
|+++
T Consensus 324 ei~~ 327 (412)
T 2vd5_A 324 DFRT 327 (412)
T ss_dssp HHHT
T ss_pred HHhc
Confidence 8865
No 171
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=1.4e-38 Score=350.58 Aligned_cols=266 Identities=23% Similarity=0.313 Sum_probs=200.3
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccc---cchhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCc
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQ---CEGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGND 759 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 759 (1008)
.++|++.+.||+|+||.||+|.+..+++.||+|+++.. .....+.+.+|++++++++||||+++++++ ..++
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~ 105 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASF-----IEDN 105 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-----EETT
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEE-----EcCC
Confidence 46799999999999999999999889999999999743 234456799999999999999999999995 4456
Q ss_pred eEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeE
Q 045798 760 FKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGH 839 (1008)
Q Consensus 760 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 839 (1008)
..++||||+++++|.+++...... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 106 ~~~lv~e~~~~~~L~~~l~~~~~~------~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~k 176 (310)
T 2wqm_A 106 ELNIVLELADAGDLSRMIKHFKKQ------KRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVK 176 (310)
T ss_dssp EEEEEEECCCSCBHHHHHHHHHHT------TCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEE
T ss_pred cEEEEEecCCCCCHHHHHHHhccc------ccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEE
Confidence 799999999999999998642111 11689999999999999999999998 999999999999999999999
Q ss_pred EcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHHh
Q 045798 840 IGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFARM 919 (1008)
Q Consensus 840 L~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~~ 919 (1008)
|+|||++......... .....|++.|+|||++.+..++.++||||||+++|+|++|+.||................
T Consensus 177 l~Dfg~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~ 252 (310)
T 2wqm_A 177 LGDLGLGRFFSSKTTA----AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQ 252 (310)
T ss_dssp ECCC----------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHT
T ss_pred EEeccceeeecCCCcc----ccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhc
Confidence 9999999865433221 123458999999999999999999999999999999999999986321111111100000
Q ss_pred -hCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHHHHHHHHHHH
Q 045798 920 -ALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHELQSVKNILL 996 (1008)
Q Consensus 920 -~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~i~~~~~ 996 (1008)
..+. . .....+.++.+++.+||+.||.+|||+.||++.|+++++...
T Consensus 253 ~~~~~---------~---------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~ 300 (310)
T 2wqm_A 253 CDYPP---------L---------------------PSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTA 300 (310)
T ss_dssp TCSCC---------C---------------------CTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred ccCCC---------C---------------------cccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhh
Confidence 0000 0 001234568999999999999999999999999999987654
No 172
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=8.6e-39 Score=354.29 Aligned_cols=260 Identities=23% Similarity=0.396 Sum_probs=200.1
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeE----EEEEEeccc-cchhhHHHHHHHHHHhhcCCCCceeeeeccccccccC
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIV----VAIKVINLQ-CEGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQG 757 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~----vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 757 (1008)
.++|++.+.||+|+||.||+|.+..+++. ||+|.++.. .....+.+.+|+.++++++||||++++++|..
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~----- 88 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT----- 88 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEES-----
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEec-----
Confidence 46799999999999999999999777764 577776533 33456789999999999999999999999642
Q ss_pred CceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCC
Q 045798 758 NDFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLS 837 (1008)
Q Consensus 758 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 837 (1008)
...++|+||+++|+|.+++..... .+++..++.|+.||+.||+|||++ +|+||||||+||+++.++.
T Consensus 89 -~~~~~v~~~~~~g~L~~~l~~~~~---------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~ 155 (327)
T 3lzb_A 89 -STVQLITQLMPFGCLLDYVREHKD---------NIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQH 155 (327)
T ss_dssp -SSEEEEECCCSSCBHHHHHHHTTT---------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTE
T ss_pred -CCceEEEEecCCCcHHHHHHhcCC---------CCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCC
Confidence 237899999999999999976532 689999999999999999999998 9999999999999999999
Q ss_pred eEEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHh-CCCCCCccccCCccHHHH
Q 045798 838 GHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVT-AKKPTDVMFEGDLNLHNF 916 (1008)
Q Consensus 838 ~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-G~~pf~~~~~~~~~~~~~ 916 (1008)
+||+|||+++......... ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||....... ....
T Consensus 156 ~kL~DfG~a~~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~--~~~~ 231 (327)
T 3lzb_A 156 VKITDFGLAKLLGAEEKEY--HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE--ISSI 231 (327)
T ss_dssp EEECCTTC------------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--HHHH
T ss_pred EEEccCcceeEccCccccc--cccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHH--HHHH
Confidence 9999999998764433221 1223447889999999999999999999999999999999 999986432211 1111
Q ss_pred HHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHHHHHHHHH
Q 045798 917 ARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHELQSVKNI 994 (1008)
Q Consensus 917 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~i~~~ 994 (1008)
..... . .+ ....++.++.+++.+||+.||.+|||+.|+++.|+++...
T Consensus 232 ~~~~~------------~--------------~~----~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 232 LEKGE------------R--------------LP----QPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp HHTTC------------C--------------CC----CCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred HHcCC------------C--------------CC----CCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 10000 0 00 0012344678999999999999999999999999998754
No 173
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=5.9e-39 Score=360.13 Aligned_cols=251 Identities=27% Similarity=0.331 Sum_probs=192.5
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEecccc---chhhHHHHHHHHH-HhhcCCCCceeeeeccccccccCC
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQC---EGASKSFMAECKA-LKNIRHRNLVKVITSCSSIDFQGN 758 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~-l~~l~h~niv~~~~~~~~~~~~~~ 758 (1008)
.++|++.+.||+|+||.||+|+++.+++.||+|+++... ......+.+|..+ ++.++||||++++++ +...
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~-----~~~~ 111 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFS-----FQTA 111 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEE-----EECS
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEE-----EEeC
Confidence 467999999999999999999999899999999997543 2334556777776 567899999999998 4567
Q ss_pred ceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCe
Q 045798 759 DFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSG 838 (1008)
Q Consensus 759 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 838 (1008)
+..|+||||+++|+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+
T Consensus 112 ~~~~lv~E~~~gg~L~~~l~~~~----------~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~i 178 (373)
T 2r5t_A 112 DKLYFVLDYINGGELFYHLQRER----------CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHI 178 (373)
T ss_dssp SEEEEEEECCCSCBHHHHHHHHS----------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCE
T ss_pred CEEEEEEeCCCCCcHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCE
Confidence 78999999999999999997543 688999999999999999999998 99999999999999999999
Q ss_pred EEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHH
Q 045798 839 HIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFAR 918 (1008)
Q Consensus 839 kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~ 918 (1008)
||+|||+++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ...
T Consensus 179 kL~DFG~a~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~-----~~~- 248 (373)
T 2r5t_A 179 VLTDFGLCKENIEHNS----TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA-----EMY- 248 (373)
T ss_dssp EECCCCBCGGGBCCCC----CCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHH-----HHH-
T ss_pred EEeeCccccccccCCC----ccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH-----HHH-
Confidence 9999999985332221 123456999999999999999999999999999999999999998642110 000
Q ss_pred hhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHHH
Q 045798 919 MALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHEL 988 (1008)
Q Consensus 919 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L 988 (1008)
..++...+ .++. ..+..+.+++.+||+.||.+||++.+.++.+
T Consensus 249 -------~~i~~~~~--------------~~~~------~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i 291 (373)
T 2r5t_A 249 -------DNILNKPL--------------QLKP------NITNSARHLLEGLLQKDRTKRLGAKDDFMEI 291 (373)
T ss_dssp -------HHHHHSCC--------------CCCS------SSCHHHHHHHHHHTCSSGGGSTTTTTTHHHH
T ss_pred -------HHHHhccc--------------CCCC------CCCHHHHHHHHHHcccCHHhCCCCCCCHHHH
Confidence 00010000 0011 1234578999999999999999986544433
No 174
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=1.5e-38 Score=354.18 Aligned_cols=276 Identities=22% Similarity=0.307 Sum_probs=211.9
Q ss_pred HHHhcCCCCCceEeeccCeeEEEEEEcCCC-----eEEEEEEecccc-chhhHHHHHHHHHHhhc-CCCCceeeeecccc
Q 045798 680 LKATNGFSSTHLIGVGSFGCVYKGALDEDG-----IVVAIKVINLQC-EGASKSFMAECKALKNI-RHRNLVKVITSCSS 752 (1008)
Q Consensus 680 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~-----~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~ 752 (1008)
....++|++.+.||+|+||.||+|.+..++ +.||+|+++... ....+.+.+|+++++++ +||||++++++|
T Consensus 42 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~-- 119 (333)
T 2i1m_A 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGAC-- 119 (333)
T ss_dssp BCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE--
T ss_pred cCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEE--
Confidence 334578999999999999999999986555 489999997543 34457799999999999 899999999995
Q ss_pred ccccCCceEEEEEeccCCCChhcccccCCCC----CCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCC
Q 045798 753 IDFQGNDFKAIVYEYMPNGSLEKWLHPHAVP----KRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPS 828 (1008)
Q Consensus 753 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~----~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~ 828 (1008)
..++..++||||+++|+|.+++...... .........+++..++.++.||+.||+|||+. +|+||||||+
T Consensus 120 ---~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~ 193 (333)
T 2i1m_A 120 ---THGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAAR 193 (333)
T ss_dssp ---CSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGG
T ss_pred ---ecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccc
Confidence 4556689999999999999998753210 00000012579999999999999999999998 9999999999
Q ss_pred CeeecCCCCeEEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHh-CCCCCCccc
Q 045798 829 NILLDNDLSGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVT-AKKPTDVMF 907 (1008)
Q Consensus 829 NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-G~~pf~~~~ 907 (1008)
||+++.++.+||+|||++.......... ......+|+.|+|||++.+..++.++|||||||++|||++ |..||....
T Consensus 194 NIl~~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 271 (333)
T 2i1m_A 194 NVLLTNGHVAKIGDFGLARDIMNDSNYI--VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGIL 271 (333)
T ss_dssp GCEEEGGGEEEBCCCGGGCCGGGCTTSE--ECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred eEEECCCCeEEECcccccccccccccee--ecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccc
Confidence 9999999999999999998664433221 1223457889999999988889999999999999999998 899986432
Q ss_pred cCCccHHHHHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHH
Q 045798 908 EGDLNLHNFARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHE 987 (1008)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 987 (1008)
... ............. ....++..+.+++.+||+.||.+|||+.||++.
T Consensus 272 ~~~-~~~~~~~~~~~~~------------------------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~ 320 (333)
T 2i1m_A 272 VNS-KFYKLVKDGYQMA------------------------------QPAFAPKNIYSIMQACWALEPTHRPTFQQICSF 320 (333)
T ss_dssp SSH-HHHHHHHHTCCCC------------------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred hhH-HHHHHHhcCCCCC------------------------------CCCCCCHHHHHHHHHHhccChhhCcCHHHHHHH
Confidence 211 1111111100000 000124567899999999999999999999999
Q ss_pred HHHHHHHHH
Q 045798 988 LQSVKNILL 996 (1008)
Q Consensus 988 L~~i~~~~~ 996 (1008)
|+++.....
T Consensus 321 L~~~~~~~~ 329 (333)
T 2i1m_A 321 LQEQAQEDR 329 (333)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHhhh
Confidence 998876543
No 175
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=1.6e-38 Score=352.17 Aligned_cols=249 Identities=22% Similarity=0.277 Sum_probs=191.0
Q ss_pred hcCCCCCceEeeccCeeEEEEEEc---CCCeEEEEEEecccc----chhhHHHHHHHHHHhhcCCCCceeeeeccccccc
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALD---EDGIVVAIKVINLQC----EGASKSFMAECKALKNIRHRNLVKVITSCSSIDF 755 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~---~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 755 (1008)
.++|++.+.||+|+||.||+|+.. .+++.||+|+++... ......+.+|++++++++||||+++++++
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~----- 90 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAF----- 90 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEE-----
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEE-----
Confidence 467999999999999999999984 578999999997542 23345688999999999999999999994
Q ss_pred cCCceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCC
Q 045798 756 QGNDFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDND 835 (1008)
Q Consensus 756 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 835 (1008)
..++..|+||||+++++|.+++.... .+++..++.++.||+.||+|||+. +|+||||||+||+++.+
T Consensus 91 ~~~~~~~lv~e~~~~~~L~~~l~~~~----------~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~ 157 (327)
T 3a62_A 91 QTGGKLYLILEYLSGGELFMQLEREG----------IFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQ 157 (327)
T ss_dssp ECSSCEEEEEECCTTEEHHHHHHHHS----------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTT
T ss_pred EcCCEEEEEEeCCCCCcHHHHHHhCC----------CCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCC
Confidence 55677999999999999999997543 688999999999999999999998 99999999999999999
Q ss_pred CCeEEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHH
Q 045798 836 LSGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHN 915 (1008)
Q Consensus 836 ~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~ 915 (1008)
+.+||+|||+++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ....
T Consensus 158 ~~~kl~Dfg~~~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~ 232 (327)
T 3a62_A 158 GHVKLTDFGLCKESIHDGT----VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKK-TIDK 232 (327)
T ss_dssp SCEEECCCSCC--------------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHH
T ss_pred CcEEEEeCCcccccccCCc----cccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHH-HHHH
Confidence 9999999999975432221 1223468999999999999899999999999999999999999986431110 0000
Q ss_pred HHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCC-----CHHHHHH
Q 045798 916 FARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRM-----NMTNVVH 986 (1008)
Q Consensus 916 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~evl~ 986 (1008)
... ... .++ ...+.++.+++.+||+.||++|| +++|+++
T Consensus 233 i~~------------~~~--------------~~p------~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 233 ILK------------CKL--------------NLP------PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp HHH------------TCC--------------CCC------TTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred HHh------------CCC--------------CCC------CCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 000 000 000 01345678999999999999999 6777765
No 176
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=1.3e-38 Score=352.00 Aligned_cols=272 Identities=22% Similarity=0.256 Sum_probs=199.6
Q ss_pred hcCCCCC-ceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhhc-CCCCceeeeeccccccccCCce
Q 045798 683 TNGFSST-HLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKNI-RHRNLVKVITSCSSIDFQGNDF 760 (1008)
Q Consensus 683 ~~~y~~~-~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~ 760 (1008)
.+.|++. +.||+|+||.||+|.+..+++.||||+++.......+.+.+|++++.++ +||||+++++++ ..++.
T Consensus 11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~-----~~~~~ 85 (316)
T 2ac3_A 11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFF-----EEEDR 85 (316)
T ss_dssp TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEE-----EETTE
T ss_pred ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEE-----eeCCE
Confidence 3568875 7899999999999999889999999999866556677899999999985 799999999995 45677
Q ss_pred EEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCC---
Q 045798 761 KAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLS--- 837 (1008)
Q Consensus 761 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~--- 837 (1008)
.++||||+++|+|.+++.... .+++..++.++.||+.||+|||+. +|+||||||+||+++.++.
T Consensus 86 ~~lv~e~~~~~~L~~~l~~~~----------~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~ 152 (316)
T 2ac3_A 86 FYLVFEKMRGGSILSHIHKRR----------HFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSP 152 (316)
T ss_dssp EEEEEECCTTCBHHHHHHHHS----------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCS
T ss_pred EEEEEEcCCCCcHHHHHhccC----------CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCc
Confidence 999999999999999997643 689999999999999999999998 9999999999999988766
Q ss_pred eEEcccCcccccccccCc---cccccccccccccccCccccCC-----CCCCcccchhhHHHHHHHHHhCCCCCCccccC
Q 045798 838 GHIGDFGLARFHQEVSNS---TLSSSVGVKGTIGYTAPEYGLG-----SEVSTNGDVYSYGILLLEMVTAKKPTDVMFEG 909 (1008)
Q Consensus 838 ~kL~Dfg~a~~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwslG~vl~elltG~~pf~~~~~~ 909 (1008)
+||+|||++......... .........||+.|+|||++.+ ..++.++|||||||++|||++|+.||......
T Consensus 153 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~ 232 (316)
T 2ac3_A 153 VKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGS 232 (316)
T ss_dssp EEECCTTCCC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCS
T ss_pred eEEEEccCccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccc
Confidence 999999999865432211 1111223458999999999865 45889999999999999999999999754332
Q ss_pred CccHHHHHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 910 DLNLHNFARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
+..+.... ..+.....+...... .....+.......+.++.+++.+||+.||++|||++|+++
T Consensus 233 ~~~~~~~~--~~~~~~~~~~~~i~~------------~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 233 DCGWDRGE--ACPACQNMLFESIQE------------GKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp CSCC------CCHHHHHHHHHHHHH------------CCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred cccccccc--cchhHHHHHHHHHhc------------cCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 21110000 000000000000000 0000000011124567899999999999999999999987
No 177
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=2.7e-38 Score=352.00 Aligned_cols=272 Identities=21% Similarity=0.394 Sum_probs=209.9
Q ss_pred hcCCCCCceEeeccCeeEEEEEEc-------CCCeEEEEEEecccc-chhhHHHHHHHHHHhhc-CCCCceeeeeccccc
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALD-------EDGIVVAIKVINLQC-EGASKSFMAECKALKNI-RHRNLVKVITSCSSI 753 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~-------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 753 (1008)
.++|++.+.||+|+||.||+|.+. .+++.||+|+++... ....+.+.+|+++++++ +||||+++++++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~--- 110 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC--- 110 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE---
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEE---
Confidence 578999999999999999999974 356789999997543 34456799999999999 999999999995
Q ss_pred cccCCceEEEEEeccCCCChhcccccCCCCCCC------cccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCC
Q 045798 754 DFQGNDFKAIVYEYMPNGSLEKWLHPHAVPKRD------KEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKP 827 (1008)
Q Consensus 754 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~------~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp 827 (1008)
..++..++||||+++|+|.+++......... ......+++..++.++.||+.||+|||+. +|+||||||
T Consensus 111 --~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp 185 (334)
T 2pvf_A 111 --TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAA 185 (334)
T ss_dssp --CSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSG
T ss_pred --ccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCcc
Confidence 4556789999999999999999865432110 00122589999999999999999999998 999999999
Q ss_pred CCeeecCCCCeEEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHh-CCCCCCcc
Q 045798 828 SNILLDNDLSGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVT-AKKPTDVM 906 (1008)
Q Consensus 828 ~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-G~~pf~~~ 906 (1008)
+||+++.++.+||+|||+++......... ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||...
T Consensus 186 ~NIll~~~~~~kL~Dfg~~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~ 263 (334)
T 2pvf_A 186 RNVLVTENNVMKIADFGLARDINNIDYYK--KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI 263 (334)
T ss_dssp GGEEECTTCCEEECCCTTCEECTTTSSEE--CCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred ceEEEcCCCCEEEcccccccccccccccc--ccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcC
Confidence 99999999999999999998665432211 1223447889999999988889999999999999999999 99998642
Q ss_pred ccCCccHHHHHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 907 FEGDLNLHNFARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
... ........... .. ....++.++.+++.+||+.||.+|||+.|+++
T Consensus 264 ~~~--~~~~~~~~~~~--------------------------~~----~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 311 (334)
T 2pvf_A 264 PVE--ELFKLLKEGHR--------------------------MD----KPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311 (334)
T ss_dssp CHH--HHHHHHHHTCC--------------------------CC----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CHH--HHHHHHhcCCC--------------------------CC----CCccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 110 00000000000 00 00123456899999999999999999999999
Q ss_pred HHHHHHHHHH
Q 045798 987 ELQSVKNILL 996 (1008)
Q Consensus 987 ~L~~i~~~~~ 996 (1008)
.|+++.....
T Consensus 312 ~L~~l~~~~~ 321 (334)
T 2pvf_A 312 DLDRILTLTT 321 (334)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHhccc
Confidence 9999977643
No 178
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=4e-38 Score=343.37 Aligned_cols=252 Identities=26% Similarity=0.368 Sum_probs=199.6
Q ss_pred cCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEecccc--chhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCceE
Q 045798 684 NGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQC--EGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDFK 761 (1008)
Q Consensus 684 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 761 (1008)
..|++.+.||+|+||.||+|.+..++..||+|++.... ....+.+.+|+.++++++||||+++++++... ..+....
T Consensus 26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-~~~~~~~ 104 (290)
T 1t4h_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWEST-VKGKKCI 104 (290)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEE-SSSCEEE
T ss_pred eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccc-cCCCceE
Confidence 34788889999999999999999899999999987432 34457799999999999999999999986532 2345678
Q ss_pred EEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCC--ceeccCCCCCeeec-CCCCe
Q 045798 762 AIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEP--ILHCDLKPSNILLD-NDLSG 838 (1008)
Q Consensus 762 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~--ivH~Dlkp~NIll~-~~~~~ 838 (1008)
++||||+++++|.+++.... .+++..++.++.||+.||+|||+. + |+||||||+||+++ .++.+
T Consensus 105 ~lv~e~~~~~~L~~~l~~~~----------~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~ 171 (290)
T 1t4h_A 105 VLVTELMTSGTLKTYLKRFK----------VMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSV 171 (290)
T ss_dssp EEEEECCCSCBHHHHHHHHS----------SCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCE
T ss_pred EEEEEecCCCCHHHHHHHcc----------CCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCE
Confidence 99999999999999997543 689999999999999999999997 7 99999999999997 78999
Q ss_pred EEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHH
Q 045798 839 HIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFAR 918 (1008)
Q Consensus 839 kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~ 918 (1008)
||+|||++........ ....||+.|+|||++.+ .++.++||||+||++|+|++|+.||....... ....
T Consensus 172 kl~Dfg~~~~~~~~~~------~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~----~~~~ 240 (290)
T 1t4h_A 172 KIGDLGLATLKRASFA------KAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAA----QIYR 240 (290)
T ss_dssp EECCTTGGGGCCTTSB------EESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHH----HHHH
T ss_pred EEeeCCCccccccccc------ccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCcHH----HHHH
Confidence 9999999975433221 22458999999998764 58999999999999999999999986432111 1111
Q ss_pred hhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 919 MALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 919 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
...... .. .......+.++.+++.+||+.||.+|||++|+++
T Consensus 241 ~~~~~~---------~~-----------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 241 RVTSGV---------KP-----------------ASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp HHTTTC---------CC-----------------GGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHhccC---------Cc-----------------cccCCCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 000000 00 0000112345789999999999999999999985
No 179
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=2.6e-38 Score=347.29 Aligned_cols=251 Identities=23% Similarity=0.265 Sum_probs=200.4
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCceEE
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 762 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 762 (1008)
.++|.+.+.||+|+||.||+|++..+|+.||+|+++.......+.+.+|++++++++||||+++++++ ..++..+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~ 82 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIY-----ESTTHYY 82 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEE-----ECSSEEE
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhc-----ccCCEEE
Confidence 45799999999999999999999889999999999865555556789999999999999999999984 5567799
Q ss_pred EEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeee---cCCCCeE
Q 045798 763 IVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILL---DNDLSGH 839 (1008)
Q Consensus 763 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~k 839 (1008)
+||||+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+|
T Consensus 83 lv~e~~~~~~L~~~l~~~~----------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~k 149 (304)
T 2jam_A 83 LVMQLVSGGELFDRILERG----------VYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIM 149 (304)
T ss_dssp EEECCCCSCBHHHHHHHHS----------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEE
T ss_pred EEEEcCCCccHHHHHHHcC----------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEE
Confidence 9999999999999986543 689999999999999999999998 99999999999999 7889999
Q ss_pred EcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHHh
Q 045798 840 IGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFARM 919 (1008)
Q Consensus 840 L~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~~ 919 (1008)
|+|||.+....... .....||+.|+|||++.+..++.++||||+||++|||++|+.||....... ........
T Consensus 150 l~Dfg~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~i~~~ 222 (304)
T 2jam_A 150 ITDFGLSKMEQNGI------MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESK-LFEKIKEG 222 (304)
T ss_dssp BCSCSTTCCCCCBT------THHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHHC
T ss_pred EccCCcceecCCCc------cccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHcC
Confidence 99999997543321 112358999999999999999999999999999999999999986431110 00000000
Q ss_pred hCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 920 ALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 920 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
. .. + ..+.....+.++.+++.+||+.||.+|||++|+++
T Consensus 223 ~------------~~--------------~--~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 223 Y------------YE--------------F--ESPFWDDISESAKDFICHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp C------------CC--------------C--CTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred C------------CC--------------C--CccccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 0 00 0 00001123456899999999999999999999986
No 180
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=9.9e-39 Score=348.30 Aligned_cols=263 Identities=22% Similarity=0.310 Sum_probs=206.6
Q ss_pred HhcCCCCCc-eEeeccCeeEEEEEE--cCCCeEEEEEEecccc--chhhHHHHHHHHHHhhcCCCCceeeeecccccccc
Q 045798 682 ATNGFSSTH-LIGVGSFGCVYKGAL--DEDGIVVAIKVINLQC--EGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQ 756 (1008)
Q Consensus 682 ~~~~y~~~~-~lg~G~~g~Vy~~~~--~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 756 (1008)
..++|.+.+ .||+|+||.||+|.+ ..+++.||||+++... ....+.+.+|+++++.++||||+++++++
T Consensus 14 ~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~------ 87 (291)
T 1xbb_A 14 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC------ 87 (291)
T ss_dssp CGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE------
T ss_pred cchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE------
Confidence 356788888 999999999999954 5567899999997543 23357899999999999999999999985
Q ss_pred CCceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCC
Q 045798 757 GNDFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDL 836 (1008)
Q Consensus 757 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 836 (1008)
..+..++||||+++++|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++
T Consensus 88 ~~~~~~lv~e~~~~~~L~~~l~~~~----------~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~ 154 (291)
T 1xbb_A 88 EAESWMLVMEMAELGPLNKYLQQNR----------HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQH 154 (291)
T ss_dssp ESSSEEEEEECCTTEEHHHHHHHCT----------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETT
T ss_pred CCCCcEEEEEeCCCCCHHHHHHhCc----------CCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCC
Confidence 2345799999999999999997653 689999999999999999999998 999999999999999999
Q ss_pred CeEEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHh-CCCCCCccccCCccHHH
Q 045798 837 SGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVT-AKKPTDVMFEGDLNLHN 915 (1008)
Q Consensus 837 ~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-G~~pf~~~~~~~~~~~~ 915 (1008)
.+||+|||++........... ......+++.|+|||++.+..++.++||||||+++|||++ |+.||...... ....
T Consensus 155 ~~kl~Dfg~~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~ 231 (291)
T 1xbb_A 155 YAKISDFGLSKALRADENYYK-AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--EVTA 231 (291)
T ss_dssp EEEECCCTTCEECCTTCSEEE-C----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HHHH
T ss_pred cEEEccCCcceeeccCCCccc-ccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHH--HHHH
Confidence 999999999986654332211 1222346789999999988889999999999999999999 99998643211 0001
Q ss_pred HHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHHHHHHHHHH
Q 045798 916 FARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHELQSVKNIL 995 (1008)
Q Consensus 916 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~i~~~~ 995 (1008)
....... . . ....++..+.+++.+||+.||++|||+.|+++.|+++....
T Consensus 232 ~~~~~~~--------~----------------~------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~ 281 (291)
T 1xbb_A 232 MLEKGER--------M----------------G------CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDV 281 (291)
T ss_dssp HHHTTCC--------C----------------C------CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred HHHcCCC--------C----------------C------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHH
Confidence 1000000 0 0 00123556899999999999999999999999999987654
Q ss_pred H
Q 045798 996 L 996 (1008)
Q Consensus 996 ~ 996 (1008)
.
T Consensus 282 ~ 282 (291)
T 1xbb_A 282 V 282 (291)
T ss_dssp H
T ss_pred h
Confidence 3
No 181
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=1.4e-38 Score=344.59 Aligned_cols=254 Identities=26% Similarity=0.388 Sum_probs=198.2
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCceEE
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 762 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 762 (1008)
.++|++.+.||+|+||.||+|.+ .++.||||+++.. ...+.+.+|++++++++||||+++++++. ...+..+
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~----~~~~~~~ 91 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIV----EEKGGLY 91 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEE--TTEEEEEEECCCC--C--HHHHHTHHHHTTCCCTTBCCEEEEEC----CC--CCE
T ss_pred hhhceEEeEEecCCCceEEEEEE--cCCEEEEEEecch--hHHHHHHHHHHHHHhCCCCCEeeEEEEEE----cCCCceE
Confidence 46799999999999999999988 5889999999744 34578999999999999999999999853 3345689
Q ss_pred EEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeEEcc
Q 045798 763 IVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGHIGD 842 (1008)
Q Consensus 763 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 842 (1008)
+||||+++++|.+++.... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 92 lv~e~~~~~~L~~~l~~~~--------~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~D 160 (278)
T 1byg_A 92 IVTEYMAKGSLVDYLRSRG--------RSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSD 160 (278)
T ss_dssp EEECCCTTEEHHHHHHHHH--------HHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECC
T ss_pred EEEecCCCCCHHHHHHhcc--------cccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEee
Confidence 9999999999999997542 11478999999999999999999998 999999999999999999999999
Q ss_pred cCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHh-CCCCCCccccCCccHHHHHHhhC
Q 045798 843 FGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVT-AKKPTDVMFEGDLNLHNFARMAL 921 (1008)
Q Consensus 843 fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-G~~pf~~~~~~~~~~~~~~~~~~ 921 (1008)
||.+........ ...+++.|+|||++.+..++.++||||||+++|||++ |+.||......+ .....
T Consensus 161 fg~~~~~~~~~~-------~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~--~~~~~---- 227 (278)
T 1byg_A 161 FGLTKEASSTQD-------TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--VVPRV---- 227 (278)
T ss_dssp CCC-------------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGG--HHHHH----
T ss_pred cccccccccccc-------CCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHH----
Confidence 999975543221 2247889999999988889999999999999999998 999986432110 00000
Q ss_pred CcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHHHHHHHHH
Q 045798 922 PNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHELQSVKNI 994 (1008)
Q Consensus 922 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~i~~~ 994 (1008)
...... .....++..+.+++.+||+.||++|||+.|+++.|++++..
T Consensus 228 --------~~~~~~------------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~ 274 (278)
T 1byg_A 228 --------EKGYKM------------------DAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH 274 (278)
T ss_dssp --------TTTCCC------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred --------hcCCCC------------------CCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhh
Confidence 000000 00012345689999999999999999999999999998765
No 182
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=3.1e-38 Score=350.11 Aligned_cols=266 Identities=19% Similarity=0.236 Sum_probs=207.5
Q ss_pred CCCCCHHHHHHHhcCCCCC-ceEeeccCeeEEEEEEcCCCeEEEEEEecccc--chhhHHHHHHHHHHhhc-CCCCceee
Q 045798 671 LPKMSYKSLLKATNGFSST-HLIGVGSFGCVYKGALDEDGIVVAIKVINLQC--EGASKSFMAECKALKNI-RHRNLVKV 746 (1008)
Q Consensus 671 ~~~~~~~~~~~~~~~y~~~-~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~~ 746 (1008)
.+.+.+.......++|.+. +.||+|+||.||+|.+..+++.||+|+++... ......+.+|+.+++++ +||||+++
T Consensus 15 ~~n~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~ 94 (327)
T 3lm5_A 15 TENLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINL 94 (327)
T ss_dssp -CCCCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCE
T ss_pred chhhHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEE
Confidence 4455666666677788888 89999999999999999899999999997543 23357899999999999 57999999
Q ss_pred eeccccccccCCceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCC
Q 045798 747 ITSCSSIDFQGNDFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLK 826 (1008)
Q Consensus 747 ~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlk 826 (1008)
++++ ..++..++||||+++|+|.+++...... .+++..++.++.|++.||+|||+. +|+|||||
T Consensus 95 ~~~~-----~~~~~~~lv~e~~~~~~L~~~~~~~~~~--------~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dik 158 (327)
T 3lm5_A 95 HEVY-----ENTSEIILILEYAAGGEIFSLCLPELAE--------MVSENDVIRLIKQILEGVYYLHQN---NIVHLDLK 158 (327)
T ss_dssp EEEE-----ECSSEEEEEEECCTTEEGGGGGSSCC-C--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCC
T ss_pred EEEE-----EeCCeEEEEEEecCCCcHHHHHHHhccc--------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCC
Confidence 9994 5667799999999999999998654321 689999999999999999999998 99999999
Q ss_pred CCCeeecC---CCCeEEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCC
Q 045798 827 PSNILLDN---DLSGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPT 903 (1008)
Q Consensus 827 p~NIll~~---~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf 903 (1008)
|+||+++. ++.+||+|||+++....... .....||+.|+|||++.+..++.++|||||||++|||++|+.||
T Consensus 159 p~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf 233 (327)
T 3lm5_A 159 PQNILLSSIYPLGDIKIVDFGMSRKIGHACE-----LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPF 233 (327)
T ss_dssp GGGEEESCBTTBCCEEECCGGGCEEC--------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred hHHEEEecCCCCCcEEEeeCccccccCCccc-----cccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence 99999987 78999999999986643322 12345899999999999999999999999999999999999998
Q ss_pred CccccCCccHHHHHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHH
Q 045798 904 DVMFEGDLNLHNFARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTN 983 (1008)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~e 983 (1008)
......+ ............ ........+..+.+++.+||+.||++|||++|
T Consensus 234 ~~~~~~~-~~~~i~~~~~~~----------------------------~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ 284 (327)
T 3lm5_A 234 VGEDNQE-TYLNISQVNVDY----------------------------SEETFSSVSQLATDFIQSLLVKNPEKRPTAEI 284 (327)
T ss_dssp CCSSHHH-HHHHHHHTCCCC----------------------------CTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred CCCCchH-HHHHHHhccccc----------------------------CchhhcccCHHHHHHHHHHcCCChhhCcCHHH
Confidence 6432110 000000000000 00001123456789999999999999999999
Q ss_pred HHH
Q 045798 984 VVH 986 (1008)
Q Consensus 984 vl~ 986 (1008)
+++
T Consensus 285 ll~ 287 (327)
T 3lm5_A 285 CLS 287 (327)
T ss_dssp HTT
T ss_pred HhC
Confidence 976
No 183
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=6.6e-39 Score=355.87 Aligned_cols=278 Identities=24% Similarity=0.310 Sum_probs=195.3
Q ss_pred HHHhcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccc--hhhHHHHHHHHHHhhcCCCCceeeeeccccccccC
Q 045798 680 LKATNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCE--GASKSFMAECKALKNIRHRNLVKVITSCSSIDFQG 757 (1008)
Q Consensus 680 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 757 (1008)
....++|++.+.||+|+||+||+|++..+++.||||+++.... ...+.+.+|++++++++||||+++++++ ..
T Consensus 30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~ 104 (329)
T 3gbz_A 30 ATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVI-----HH 104 (329)
T ss_dssp --CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEE-----EE
T ss_pred ccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEE-----ec
Confidence 3456789999999999999999999999999999999975432 2345688999999999999999999994 55
Q ss_pred CceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeec----
Q 045798 758 NDFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLD---- 833 (1008)
Q Consensus 758 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~---- 833 (1008)
++..++||||++ |+|.+++.... .+++..++.++.||+.||+|||+. +|+||||||+||+++
T Consensus 105 ~~~~~lv~e~~~-~~L~~~~~~~~----------~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~ 170 (329)
T 3gbz_A 105 NHRLHLIFEYAE-NDLKKYMDKNP----------DVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDA 170 (329)
T ss_dssp TTEEEEEEECCS-EEHHHHHHHCT----------TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC---
T ss_pred CCEEEEEEecCC-CCHHHHHhhcC----------CCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCC
Confidence 677999999996 59999997654 689999999999999999999998 999999999999994
Q ss_pred -CCCCeEEcccCcccccccccCccccccccccccccccCccccCCC-CCCcccchhhHHHHHHHHHhCCCCCCccccCCc
Q 045798 834 -NDLSGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGS-EVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDL 911 (1008)
Q Consensus 834 -~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~ 911 (1008)
.++.+||+|||+++........ .....||+.|+|||++.+. .++.++|||||||++|||++|+.||......+.
T Consensus 171 ~~~~~~kl~Dfg~a~~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~ 246 (329)
T 3gbz_A 171 SETPVLKIGDFGLARAFGIPIRQ----FTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQ 246 (329)
T ss_dssp --CCEEEECCTTHHHHHC---------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred CccceEEECcCCCccccCCcccc----cCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHH
Confidence 4556999999999865432211 2234589999999998875 489999999999999999999999864322211
Q ss_pred cHHHHHHhhCCcc-hhhhhcc--cccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 912 NLHNFARMALPNQ-VMDIVDP--ILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 912 ~~~~~~~~~~~~~-~~~~~d~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
..........+.. ....... ...... ... ....... ......+.++.+++.+||+.||++|||++|+++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~--~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 247 LFKIFEVLGLPDDTTWPGVTALPDWKQSF---PKF-RGKTLKR--VLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp HHHHHHHHCCCCTTTSTTGGGSTTCCTTC---CCC-CCCCHHH--HHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHHhCCCchhhhhhhhhhhhhhhhh---hhh-ccccHhh--hcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 1111111111110 0000000 000000 000 0000000 000113456799999999999999999999975
No 184
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.3e-38 Score=356.19 Aligned_cols=278 Identities=22% Similarity=0.274 Sum_probs=198.4
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccc--cchhhHHHHHHHHHHhhcCCCCceeeeecccccc-ccCCc
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQ--CEGASKSFMAECKALKNIRHRNLVKVITSCSSID-FQGND 759 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~~~ 759 (1008)
.++|++.+.||+|+||.||+|.+..+|+.||||++... .....+++.+|+++++.++||||+++++++.... .....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 46899999999999999999999989999999998643 2344567899999999999999999999975432 12234
Q ss_pred eEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeE
Q 045798 760 FKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGH 839 (1008)
Q Consensus 760 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 839 (1008)
..|+||||+ +++|.+++... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+|
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~~-----------~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~k 168 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKHE-----------KLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELK 168 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHHC-----------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEE
T ss_pred eEEEEEecC-CCCHHHHHhcC-----------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEE
Confidence 579999999 88999998753 688999999999999999999998 999999999999999999999
Q ss_pred EcccCcccccccccCccccccccccccccccCccccCC-CCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHH
Q 045798 840 IGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLG-SEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFAR 918 (1008)
Q Consensus 840 L~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~ 918 (1008)
|+|||+++..... .....+|+.|+|||++.+ ..++.++||||+||++|||++|+.||......+ .+.....
T Consensus 169 l~Dfg~a~~~~~~-------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~l~~i~~ 240 (367)
T 1cm8_A 169 ILDFGLARQADSE-------MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLD-QLKEIMK 240 (367)
T ss_dssp ECCCTTCEECCSS-------CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHH
T ss_pred EEeeecccccccc-------cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHH
Confidence 9999999865432 223458999999999877 679999999999999999999999986432111 1111111
Q ss_pred hhCCcchhhhhcccccCchHHhhhhhhhhhc-cccc-hhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 919 MALPNQVMDIVDPILRNDEEILASTDKCRRM-QTGI-NSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 919 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
..... ..+++... .... ........... .... ......+..+.+++.+||+.||.+|||++|+++
T Consensus 241 ~~g~~-~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~ 307 (367)
T 1cm8_A 241 VTGTP-PAEFVQRL-QSDE-AKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA 307 (367)
T ss_dssp HHCCC-CHHHHHTC-SCHH-HHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred hcCCC-CHHHHHHh-hhHH-HHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence 11111 01111100 0000 00000000000 0000 001123556899999999999999999999987
No 185
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=3.3e-38 Score=351.05 Aligned_cols=277 Identities=19% Similarity=0.234 Sum_probs=204.4
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhhcC-CCCceeeeeccccccccCCceE
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKNIR-HRNLVKVITSCSSIDFQGNDFK 761 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~ 761 (1008)
.++|++.+.||+|+||.||+|++..+++.||||+++.. ..+.+.+|++++++++ ||||+++++++.. ......
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~---~~~~~~ 108 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKD---PVSRTP 108 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEEC---TTTCCE
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeecc---CCCCce
Confidence 36799999999999999999999889999999999743 3467899999999996 9999999999653 235678
Q ss_pred EEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCC-CeEE
Q 045798 762 AIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDL-SGHI 840 (1008)
Q Consensus 762 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kL 840 (1008)
++||||+++++|.+++. .+++..++.++.||+.||+|||+. +|+||||||+||+++.++ .+||
T Consensus 109 ~lv~e~~~~~~l~~~~~-------------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl 172 (330)
T 3nsz_A 109 ALVFEHVNNTDFKQLYQ-------------TLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRL 172 (330)
T ss_dssp EEEEECCCCCCHHHHGG-------------GCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEE
T ss_pred EEEEeccCchhHHHHHH-------------hCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEE
Confidence 99999999999999884 578899999999999999999998 999999999999999776 8999
Q ss_pred cccCcccccccccCccccccccccccccccCccccCC-CCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHHh
Q 045798 841 GDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLG-SEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFARM 919 (1008)
Q Consensus 841 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~~ 919 (1008)
+|||+++........ ....++..|+|||++.+ ..++.++|||||||++|||++|+.||................
T Consensus 173 ~Dfg~a~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~ 247 (330)
T 3nsz_A 173 IDWGLAEFYHPGQEY-----NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV 247 (330)
T ss_dssp CCCTTCEECCTTCCC-----CSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHH
T ss_pred EeCCCceEcCCCCcc-----ccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHh
Confidence 999999865443221 23458999999999877 678999999999999999999999985433222222222222
Q ss_pred hCCcchhhhhccccc-CchHHhhhhhh--hhhccc--cchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 920 ALPNQVMDIVDPILR-NDEEILASTDK--CRRMQT--GINSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 920 ~~~~~~~~~~d~~l~-~~~~~~~~~~~--~~~~~~--~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
.......+.++..-. ..+........ ...+.. ........+.++.+++.+||+.||++|||++|+++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 248 LGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp HCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred cCCchhhhHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 211111111111100 00000000000 000000 00011124567899999999999999999999986
No 186
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.4e-38 Score=348.33 Aligned_cols=245 Identities=22% Similarity=0.250 Sum_probs=192.2
Q ss_pred cCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEecccc--chhhHHHHHHHHHHhhc-CCCCceeeeeccccccccCCce
Q 045798 684 NGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQC--EGASKSFMAECKALKNI-RHRNLVKVITSCSSIDFQGNDF 760 (1008)
Q Consensus 684 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~ 760 (1008)
++|++.++||+|+||+||+|++..+++.||||++.... ......+..|+..+.++ +||||++++++| ..++.
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~-----~~~~~ 131 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAW-----EEGGI 131 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----EETTE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEE-----EeCCE
Confidence 57999999999999999999999899999999986432 23334556666666665 999999999995 45677
Q ss_pred EEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeEE
Q 045798 761 KAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGHI 840 (1008)
Q Consensus 761 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 840 (1008)
.++||||+ +++|.+++..... .+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||
T Consensus 132 ~~lv~e~~-~~~L~~~~~~~~~---------~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl 198 (311)
T 3p1a_A 132 LYLQTELC-GPSLQQHCEAWGA---------SLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKL 198 (311)
T ss_dssp EEEEEECC-CCBHHHHHHHHCS---------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEE
T ss_pred EEEEEecc-CCCHHHHHHhcCC---------CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEE
Confidence 99999999 7799998865431 689999999999999999999998 9999999999999999999999
Q ss_pred cccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHHhh
Q 045798 841 GDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFARMA 920 (1008)
Q Consensus 841 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~~~ 920 (1008)
+|||++........ .....||+.|+|||++.+ .++.++|||||||++|||++|..|+.... ......
T Consensus 199 ~DFG~a~~~~~~~~-----~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~----~~~~~~--- 265 (311)
T 3p1a_A 199 GDFGLLVELGTAGA-----GEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGE----GWQQLR--- 265 (311)
T ss_dssp CCCTTCEECC-----------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHH----HHHHHT---
T ss_pred ccceeeeecccCCC-----CcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCcc----HHHHHh---
Confidence 99999986543321 223458999999999876 78999999999999999999977654210 011000
Q ss_pred CCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 921 LPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 921 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
..... + ......+.++.+++.+||+.||++|||++|+++
T Consensus 266 ---------~~~~~--~----------------~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 266 ---------QGYLP--P----------------EFTAGLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp ---------TTCCC--H----------------HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ---------ccCCC--c----------------ccccCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 00000 0 001123456899999999999999999999985
No 187
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.8e-38 Score=343.93 Aligned_cols=250 Identities=24% Similarity=0.389 Sum_probs=182.6
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEecccc---chhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCc
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQC---EGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGND 759 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 759 (1008)
.++|++.+.||+|+||.||+|.+..+++.||+|++.... ....+.+.+|++++++++||||+++++++ .+.+
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~ 84 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYF-----EDSN 84 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEE-----ECSS
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEE-----ccCC
Confidence 467999999999999999999998899999999996432 22346799999999999999999999994 5567
Q ss_pred eEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeE
Q 045798 760 FKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGH 839 (1008)
Q Consensus 760 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 839 (1008)
..++||||+++++|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 85 ~~~lv~e~~~~~~L~~~l~~~~~---------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~k 152 (278)
T 3cok_A 85 YVYLVLEMCHNGEMNRYLKNRVK---------PFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIK 152 (278)
T ss_dssp EEEEEEECCTTEEHHHHHHTCSS---------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEE
T ss_pred eEEEEEecCCCCcHHHHHhhccC---------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEE
Confidence 79999999999999999975431 689999999999999999999998 999999999999999999999
Q ss_pred EcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHHh
Q 045798 840 IGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFARM 919 (1008)
Q Consensus 840 L~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~~ 919 (1008)
|+|||.+......... .....||+.|+|||++.+..++.++||||||+++|||++|+.||........ .
T Consensus 153 l~dfg~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-----~-- 221 (278)
T 3cok_A 153 IADFGLATQLKMPHEK----HYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT-----L-- 221 (278)
T ss_dssp ECCCTTCEECC--------------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC----------
T ss_pred EEeecceeeccCCCCc----ceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH-----H--
Confidence 9999999865432221 1234589999999999988899999999999999999999999864321100 0
Q ss_pred hCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 920 ALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 920 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
........ ..+ ...+.++.+++.+||+.||++|||++|+++
T Consensus 222 ----------~~~~~~~~----------~~~------~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 222 ----------NKVVLADY----------EMP------SFLSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp ------------CCSSCC----------CCC------TTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ----------HHHhhccc----------CCc------cccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 00000000 000 012345789999999999999999999986
No 188
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=2.6e-38 Score=354.97 Aligned_cols=284 Identities=23% Similarity=0.317 Sum_probs=204.8
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEecccc--chhhHHHHHHHHHHhhcCCCCceeeeeccccccc---cC
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQC--EGASKSFMAECKALKNIRHRNLVKVITSCSSIDF---QG 757 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~---~~ 757 (1008)
.++|++.+.||+|+||.||+|++..+++.||+|++.... ......+.+|++++++++||||+++++++..... ..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 468999999999999999999998899999999986443 2334678899999999999999999999764321 12
Q ss_pred CceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCC
Q 045798 758 NDFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLS 837 (1008)
Q Consensus 758 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 837 (1008)
.+..++||||++ ++|.+.+..... .+++.+++.++.||+.||+|||+. +|+||||||+||+++.++.
T Consensus 96 ~~~~~lv~e~~~-~~l~~~l~~~~~---------~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~ 162 (351)
T 3mi9_A 96 KGSIYLVFDFCE-HDLAGLLSNVLV---------KFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGV 162 (351)
T ss_dssp -CEEEEEEECCS-EEHHHHHHCTTS---------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSC
T ss_pred CceEEEEEeccC-CCHHHHHhhccC---------CCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCC
Confidence 457899999996 577777754421 689999999999999999999998 9999999999999999999
Q ss_pred eEEcccCcccccccccCccccccccccccccccCccccCC-CCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHH
Q 045798 838 GHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLG-SEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNF 916 (1008)
Q Consensus 838 ~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~ 916 (1008)
+||+|||+++.................||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... .....
T Consensus 163 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~i 241 (351)
T 3mi9_A 163 LKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQH-QLALI 241 (351)
T ss_dssp EEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHH
T ss_pred EEEccchhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHH
Confidence 9999999998765443333333344568999999998876 458999999999999999999999987532211 11111
Q ss_pred HHhh--CCcchhhhhccc-ccCchHHhhhhhhhhhccccchh---HHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 917 ARMA--LPNQVMDIVDPI-LRNDEEILASTDKCRRMQTGINS---RLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 917 ~~~~--~~~~~~~~~d~~-l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
.... .+.......+.. .... ............. ....+..+.+++.+||+.||++|||++|+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 311 (351)
T 3mi9_A 242 SQLCGSITPEVWPNVDNYELYEK------LELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 311 (351)
T ss_dssp HHHHCCCCTTTSTTGGGCGGGTS------SCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHhCCCChhhccccccchhhcc------cccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence 1111 111110000000 0000 0000000000000 0112456889999999999999999999986
No 189
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=2.6e-38 Score=369.14 Aligned_cols=254 Identities=23% Similarity=0.310 Sum_probs=204.2
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEecccc---chhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCc
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQC---EGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGND 759 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 759 (1008)
.++|++.+.||+|+||.||+|++..+|+.||+|++.... ......+.+|++++++++||||+++++++ .+.+
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~-----~~~~ 257 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAY-----ETKD 257 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEE-----ECSS
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEE-----eeCC
Confidence 467999999999999999999999899999999996431 23346789999999999999999999984 5667
Q ss_pred eEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeE
Q 045798 760 FKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGH 839 (1008)
Q Consensus 760 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 839 (1008)
..|+||||+++|+|.+++...... .+++..++.++.||+.||+|||++ +||||||||+||+++.++.+|
T Consensus 258 ~l~lVmEy~~gg~L~~~l~~~~~~--------~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vK 326 (576)
T 2acx_A 258 ALCLVLTLMNGGDLKFHIYHMGQA--------GFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIR 326 (576)
T ss_dssp EEEEEECCCCSCBHHHHHHSSSSC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEE
T ss_pred EEEEEEEcCCCCcHHHHHHhcCCC--------CCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeE
Confidence 899999999999999998765421 589999999999999999999998 999999999999999999999
Q ss_pred EcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHHh
Q 045798 840 IGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFARM 919 (1008)
Q Consensus 840 L~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~~ 919 (1008)
|+|||+|+....... .....||+.|+|||++.+..++.++|||||||++|||++|+.||......... ......
T Consensus 327 L~DFGla~~~~~~~~-----~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~-~~i~~~ 400 (576)
T 2acx_A 327 ISDLGLAVHVPEGQT-----IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKR-EEVERL 400 (576)
T ss_dssp ECCCTTCEECCTTCC-----EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCH-HHHHHH
T ss_pred EEecccceecccCcc-----ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhH-HHHHHH
Confidence 999999986643321 12346999999999999999999999999999999999999999753221111 001000
Q ss_pred hCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCC-----CHHHHHH
Q 045798 920 ALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRM-----NMTNVVH 986 (1008)
Q Consensus 920 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~evl~ 986 (1008)
+.. .+... ....+.++.+++.+||+.||.+|| +++||++
T Consensus 401 ---------i~~-----------------~~~~~--p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 401 ---------VKE-----------------VPEEY--SERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp ---------HHH-----------------CCCCC--CTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred ---------hhc-----------------ccccC--CccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 000 00000 012345678999999999999999 7788875
No 190
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=1.1e-38 Score=359.25 Aligned_cols=200 Identities=27% Similarity=0.401 Sum_probs=175.1
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEecccc-chhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCceE
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQC-EGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDFK 761 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 761 (1008)
.++|++.+.||+|+||.||+|.+..+++.||+|+++... ....+.+.+|++++++++||||+++++++ ..++..
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~ 106 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF-----YSDGEI 106 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEE-----EETTEE
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEE-----EECCEE
Confidence 357999999999999999999999899999999997553 34457899999999999999999999985 456679
Q ss_pred EEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeEEc
Q 045798 762 AIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGHIG 841 (1008)
Q Consensus 762 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 841 (1008)
++||||+++++|.+++.... .+++..+..++.|++.||+|||+. .+|+||||||+||+++.++.+||+
T Consensus 107 ~lv~e~~~~~~L~~~l~~~~----------~~~~~~~~~i~~~i~~~l~~lh~~--~~i~H~dlkp~Nil~~~~~~~kl~ 174 (360)
T 3eqc_A 107 SICMEHMDGGSLDQVLKKAG----------RIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLC 174 (360)
T ss_dssp EEEECCCTTCBHHHHHHHHS----------SCCHHHHHHHHHHHHHHHHHHHHH--HCCCCSCCSGGGEEECTTCCEEEC
T ss_pred EEEEECCCCCCHHHHHHHcC----------CCCHHHHHHHHHHHHHHHHHHHHh--CCEEcCCccHHHEEECCCCCEEEE
Confidence 99999999999999997643 689999999999999999999983 189999999999999999999999
Q ss_pred ccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCc
Q 045798 842 DFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDV 905 (1008)
Q Consensus 842 Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~ 905 (1008)
|||++....... .....||+.|+|||++.+..++.++|||||||++|+|++|+.||..
T Consensus 175 Dfg~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 232 (360)
T 3eqc_A 175 DFGVSGQLIDSM------ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP 232 (360)
T ss_dssp CCCCCHHHHHHC----------CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSC
T ss_pred ECCCCccccccc------ccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 999997553321 1234589999999999999999999999999999999999999974
No 191
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=1.7e-38 Score=354.38 Aligned_cols=247 Identities=28% Similarity=0.341 Sum_probs=197.0
Q ss_pred cCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEecccc---chhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCce
Q 045798 684 NGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQC---EGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDF 760 (1008)
Q Consensus 684 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 760 (1008)
+.|+..+.||+|+||.||+|++..+++.||||++.... ....+.+.+|++++++++||||+++++++ ..++.
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~-----~~~~~ 128 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCY-----LREHT 128 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----EETTE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEE-----EECCe
Confidence 45889999999999999999998899999999997542 23346789999999999999999999995 44567
Q ss_pred EEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeEE
Q 045798 761 KAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGHI 840 (1008)
Q Consensus 761 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 840 (1008)
.++||||++ |+|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 129 ~~lv~e~~~-g~l~~~l~~~~~---------~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL 195 (348)
T 1u5q_A 129 AWLVMEYCL-GSASDLLEVHKK---------PLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKL 195 (348)
T ss_dssp EEEEEECCS-EEHHHHHHHHTS---------CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEE
T ss_pred EEEEEecCC-CCHHHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEE
Confidence 999999996 688888754321 689999999999999999999998 9999999999999999999999
Q ss_pred cccCcccccccccCccccccccccccccccCccccC---CCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHH
Q 045798 841 GDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGL---GSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFA 917 (1008)
Q Consensus 841 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~ 917 (1008)
+|||++...... ....||+.|+|||++. +..++.++|||||||++|||++|+.||....... ......
T Consensus 196 ~DfG~a~~~~~~--------~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~-~~~~~~ 266 (348)
T 1u5q_A 196 GDFGSASIMAPA--------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-ALYHIA 266 (348)
T ss_dssp CCCTTCBSSSSB--------CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHH
T ss_pred eeccCceecCCC--------CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHH
Confidence 999999865432 1245899999999874 5678999999999999999999999986421110 000000
Q ss_pred HhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHH
Q 045798 918 RMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHE 987 (1008)
Q Consensus 918 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 987 (1008)
.... +... ....+..+.+++.+||+.||++|||++|+++.
T Consensus 267 ~~~~---------~~~~---------------------~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 267 QNES---------PALQ---------------------SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 306 (348)
T ss_dssp HSCC---------CCCC---------------------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred hcCC---------CCCC---------------------CCCCCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 0000 0000 01234557899999999999999999999863
No 192
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.7e-38 Score=342.22 Aligned_cols=263 Identities=23% Similarity=0.353 Sum_probs=207.7
Q ss_pred hcCCCCCc-eEeeccCeeEEEEEEc--CCCeEEEEEEecccc-chhhHHHHHHHHHHhhcCCCCceeeeeccccccccCC
Q 045798 683 TNGFSSTH-LIGVGSFGCVYKGALD--EDGIVVAIKVINLQC-EGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGN 758 (1008)
Q Consensus 683 ~~~y~~~~-~lg~G~~g~Vy~~~~~--~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 758 (1008)
.++|.+.+ .||+|+||.||+|.+. .+++.||+|+++... ....+.+.+|++++++++||||+++++++. .
T Consensus 8 ~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~------~ 81 (287)
T 1u59_A 8 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ------A 81 (287)
T ss_dssp GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE------S
T ss_pred HHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEec------C
Confidence 34566666 9999999999999863 467899999998643 345678999999999999999999999852 3
Q ss_pred ceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCe
Q 045798 759 DFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSG 838 (1008)
Q Consensus 759 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 838 (1008)
+..++||||+++++|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 82 ~~~~lv~e~~~~~~L~~~l~~~~~---------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~ 149 (287)
T 1u59_A 82 EALMLVMEMAGGGPLHKFLVGKRE---------EIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYA 149 (287)
T ss_dssp SSEEEEEECCTTEEHHHHHTTCTT---------TSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEE
T ss_pred CCcEEEEEeCCCCCHHHHHHhCCc---------cCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCE
Confidence 458999999999999999965431 689999999999999999999998 99999999999999999999
Q ss_pred EEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHh-CCCCCCccccCCccHHHHH
Q 045798 839 HIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVT-AKKPTDVMFEGDLNLHNFA 917 (1008)
Q Consensus 839 kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-G~~pf~~~~~~~~~~~~~~ 917 (1008)
||+|||.+.......... .......+|+.|+|||++.+..++.++||||||+++|||++ |+.||...... ......
T Consensus 150 kl~Dfg~~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~~~i 226 (287)
T 1u59_A 150 KISDFGLSKALGADDSYY-TARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--EVMAFI 226 (287)
T ss_dssp EECCCTTCEECTTCSCEE-CCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH--HHHHHH
T ss_pred EECcccceeeeccCccee-eccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH--HHHHHH
Confidence 999999998765433221 11223347899999999988889999999999999999998 99998643211 111111
Q ss_pred HhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHHHHHHHHHHH
Q 045798 918 RMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHELQSVKNILL 996 (1008)
Q Consensus 918 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~i~~~~~ 996 (1008)
..... .. ....++.++.+++.+||+.||.+||++.|+++.|+++..+..
T Consensus 227 ~~~~~----------------------------~~--~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~ 275 (287)
T 1u59_A 227 EQGKR----------------------------ME--CPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLA 275 (287)
T ss_dssp HTTCC----------------------------CC--CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred hcCCc----------------------------CC--CCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcC
Confidence 00000 00 001245568999999999999999999999999999877643
No 193
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=5.8e-38 Score=340.88 Aligned_cols=256 Identities=21% Similarity=0.275 Sum_probs=202.1
Q ss_pred cCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccc------hhhHHHHHHHHHHhhcCCCCceeeeeccccccccC
Q 045798 684 NGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCE------GASKSFMAECKALKNIRHRNLVKVITSCSSIDFQG 757 (1008)
Q Consensus 684 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 757 (1008)
++|++.+.||+|+||.||+|.+..+++.||+|+++.... ...+.+.+|++++++++||||+++++++ ..
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~ 79 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIF-----EN 79 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEE-----EC
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhhee-----cC
Confidence 568999999999999999999988999999999874421 1357899999999999999999999995 45
Q ss_pred CceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCC-
Q 045798 758 NDFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDL- 836 (1008)
Q Consensus 758 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~- 836 (1008)
+...++||||+++++|.+++.... .+++..++.++.||+.||+|||+. +|+||||||+||+++.++
T Consensus 80 ~~~~~lv~e~~~~~~L~~~l~~~~----------~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~ 146 (283)
T 3bhy_A 80 KTDVVLILELVSGGELFDFLAEKE----------SLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNV 146 (283)
T ss_dssp SSEEEEEEECCCSCBHHHHHHHHS----------SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSS
T ss_pred CCeEEEEEeecCCCcHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCC
Confidence 667999999999999999996543 689999999999999999999998 999999999999998877
Q ss_pred ---CeEEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccH
Q 045798 837 ---SGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNL 913 (1008)
Q Consensus 837 ---~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~ 913 (1008)
.+||+|||.+........ .....|++.|+|||++.+..++.++||||||+++|+|++|+.||......+ ..
T Consensus 147 ~~~~~kl~dfg~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~ 220 (283)
T 3bhy_A 147 PNPRIKLIDFGIAHKIEAGNE-----FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE-TL 220 (283)
T ss_dssp SSCCEEECCCTTCEECC-------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH-HH
T ss_pred CCCceEEEecccceeccCCCc-----ccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHH-HH
Confidence 899999999986543321 123458999999999999999999999999999999999999986432110 00
Q ss_pred HHHHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH--HHHHH
Q 045798 914 HNFARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVH--ELQSV 991 (1008)
Q Consensus 914 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~--~L~~i 991 (1008)
....... ..... ......+..+.+++.+||+.||.+|||+.|+++ .++.+
T Consensus 221 ~~~~~~~------------~~~~~----------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~ 272 (283)
T 3bhy_A 221 TNISAVN------------YDFDE----------------EYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAI 272 (283)
T ss_dssp HHHHTTC------------CCCCH----------------HHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHH
T ss_pred HHhHhcc------------cCCcc----------------hhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHH
Confidence 0000000 00000 001123456789999999999999999999987 34444
No 194
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=8e-39 Score=370.52 Aligned_cols=249 Identities=24% Similarity=0.297 Sum_probs=192.9
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccc---cchhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCc
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQ---CEGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGND 759 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 759 (1008)
.++|++.+.||+|+||.||+|.+..+++.||||+++.. .......+.+|+++++.++||||+++++++ ...+
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~-----~~~~ 221 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSF-----QTHD 221 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEE-----EETT
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEE-----eeCC
Confidence 46799999999999999999999999999999999743 233446788999999999999999999995 4566
Q ss_pred eEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhh-CCCCCceeccCCCCCeeecCCCCe
Q 045798 760 FKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHH-HCQEPILHCDLKPSNILLDNDLSG 838 (1008)
Q Consensus 760 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~ 838 (1008)
..++||||+++|+|.+++.... .+++..+..++.||+.||+|||+ . +|+||||||+|||++.++.+
T Consensus 222 ~~~lv~e~~~~~~L~~~l~~~~----------~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~ 288 (446)
T 4ejn_A 222 RLCFVMEYANGGELFFHLSRER----------VFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHI 288 (446)
T ss_dssp EEEEEECCCSSCBHHHHHHHHS----------CCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCE
T ss_pred EEEEEEeeCCCCcHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCE
Confidence 7999999999999999987543 68999999999999999999998 6 99999999999999999999
Q ss_pred EEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHH
Q 045798 839 HIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFAR 918 (1008)
Q Consensus 839 kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~ 918 (1008)
||+|||+|+....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ......
T Consensus 289 kl~DFG~a~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--~~~~~i- 361 (446)
T 4ejn_A 289 KITDFGLCKEGIKDGA----TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--KLFELI- 361 (446)
T ss_dssp EECCCCCCCTTCC---------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHH-
T ss_pred EEccCCCceeccCCCc----ccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH--HHHHHH-
Confidence 9999999985432221 123356999999999999999999999999999999999999998642110 000000
Q ss_pred hhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCC-----CHHHHHH
Q 045798 919 MALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRM-----NMTNVVH 986 (1008)
Q Consensus 919 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~evl~ 986 (1008)
..... .++ ...+.++.+++.+||+.||.+|| |++|+++
T Consensus 362 ----------~~~~~--------------~~p------~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 362 ----------LMEEI--------------RFP------RTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp ----------HHCCC--------------CCC------TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred ----------HhCCC--------------CCC------ccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 00000 000 11345678999999999999999 9999986
No 195
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=3e-38 Score=342.34 Aligned_cols=259 Identities=29% Similarity=0.446 Sum_probs=206.5
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCceEE
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 762 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 762 (1008)
.++|++.+.||+|+||.||+|.+. +++.||+|+++... ...+.+.+|++++++++||||+++++++. .+..+
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~------~~~~~ 83 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT------QEPIY 83 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC------SSSCE
T ss_pred HHhhhheeeecCCCCeEEEEEEEc-CCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEc------CCCcE
Confidence 467999999999999999999985 67889999997543 34578999999999999999999999853 33479
Q ss_pred EEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeEEcc
Q 045798 763 IVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGHIGD 842 (1008)
Q Consensus 763 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 842 (1008)
+||||+++++|.+++.... ...+++..++.++.|++.||+|||+. +|+||||||+||++++++.+||+|
T Consensus 84 ~v~e~~~~~~L~~~l~~~~--------~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~D 152 (279)
T 1qpc_A 84 IITEYMENGSLVDFLKTPS--------GIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIAD 152 (279)
T ss_dssp EEEECCTTCBHHHHTTSHH--------HHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECC
T ss_pred EEEecCCCCCHHHHHhcCC--------CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECC
Confidence 9999999999999996532 12589999999999999999999998 999999999999999999999999
Q ss_pred cCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHh-CCCCCCccccCCccHHHHHHhhC
Q 045798 843 FGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVT-AKKPTDVMFEGDLNLHNFARMAL 921 (1008)
Q Consensus 843 fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-G~~pf~~~~~~~~~~~~~~~~~~ 921 (1008)
||.+......... ......++..|+|||++.+..++.++||||||+++|||++ |+.||...... .........
T Consensus 153 fg~~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~~~~~~~~- 226 (279)
T 1qpc_A 153 FGLARLIEDNEYT---AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP--EVIQNLERG- 226 (279)
T ss_dssp CTTCEECSSSCEE---CCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HHHHHHHTT-
T ss_pred CcccccccCcccc---cccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHH--HHHHHHhcc-
Confidence 9999866443211 1223447889999999988889999999999999999999 89998642111 000000000
Q ss_pred CcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHHHHHHHHHH
Q 045798 922 PNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHELQSVKNIL 995 (1008)
Q Consensus 922 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~i~~~~ 995 (1008)
.. .. ....++.++.+++.+||+.||++|||++++++.|+.+....
T Consensus 227 -----------~~--------------~~----~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 271 (279)
T 1qpc_A 227 -----------YR--------------MV----RPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 271 (279)
T ss_dssp -----------CC--------------CC----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred -----------cC--------------CC----CcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhc
Confidence 00 00 00123456899999999999999999999999999886653
No 196
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=1.5e-38 Score=353.62 Aligned_cols=252 Identities=21% Similarity=0.261 Sum_probs=198.0
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhhc-CCCCceeeeeccccccccCCceE
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKNI-RHRNLVKVITSCSSIDFQGNDFK 761 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~ 761 (1008)
.++|++.+.||+|+||.||+|.+..+++.||+|+++.... ...+|++++.++ +||||+++++++ .+++..
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~-----~~~~~~ 91 (342)
T 2qr7_A 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVY-----DDGKYV 91 (342)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEE-----ECSSEE
T ss_pred cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEE-----EcCCEE
Confidence 5679999999999999999999998999999999975432 345788888888 799999999994 567789
Q ss_pred EEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCC----CC
Q 045798 762 AIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDND----LS 837 (1008)
Q Consensus 762 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~----~~ 837 (1008)
|+||||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||++..+ +.
T Consensus 92 ~lv~E~~~gg~L~~~i~~~~----------~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~ 158 (342)
T 2qr7_A 92 YVVTELMKGGELLDKILRQK----------FFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPES 158 (342)
T ss_dssp EEEECCCCSCBHHHHHHTCT----------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGG
T ss_pred EEEEeCCCCCcHHHHHHHcC----------CCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCe
Confidence 99999999999999997654 689999999999999999999998 99999999999998543 35
Q ss_pred eEEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHH
Q 045798 838 GHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFA 917 (1008)
Q Consensus 838 ~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~ 917 (1008)
+||+|||+++........ .....||+.|+|||++.+..++.++|||||||++|||++|..||...... ......
T Consensus 159 ~kl~Dfg~a~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--~~~~~~ 232 (342)
T 2qr7_A 159 IRICDFGFAKQLRAENGL----LMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDD--TPEEIL 232 (342)
T ss_dssp EEECCCTTCEECBCTTCC----BCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTS--CHHHHH
T ss_pred EEEEECCCcccCcCCCCc----eeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcC--CHHHHH
Confidence 999999999865443221 22346899999999998888999999999999999999999999642211 111111
Q ss_pred HhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 918 RMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 918 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
... ..... ..........+.++.+++.+||+.||++|||+.|+++
T Consensus 233 ~~i--------~~~~~----------------~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~ 277 (342)
T 2qr7_A 233 ARI--------GSGKF----------------SLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLR 277 (342)
T ss_dssp HHH--------HHCCC----------------CCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred HHH--------ccCCc----------------ccCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 000 00000 0000001123456789999999999999999999986
No 197
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=2.6e-38 Score=355.23 Aligned_cols=278 Identities=21% Similarity=0.265 Sum_probs=188.4
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccc--cchhhHHHHHHHHHHhhcCCCCceeeeeccccc-cccCCc
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQ--CEGASKSFMAECKALKNIRHRNLVKVITSCSSI-DFQGND 759 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-~~~~~~ 759 (1008)
.++|++.+.||+|+||.||+|.+..+|+.||||++... .....+.+.+|+++++.++||||+++++++... ......
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 47899999999999999999999989999999999643 234456789999999999999999999986542 123345
Q ss_pred eEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeE
Q 045798 760 FKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGH 839 (1008)
Q Consensus 760 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 839 (1008)
..++|+|++ +++|.+++... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+|
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~~-----------~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~k 172 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKCQ-----------KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELK 172 (367)
T ss_dssp CCEEEEECC-CEECC-----C-----------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEE
T ss_pred eEEEEeccc-CCCHHHHHhcC-----------CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEE
Confidence 689999999 78999988642 689999999999999999999998 999999999999999999999
Q ss_pred EcccCcccccccccCccccccccccccccccCccccCC-CCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHH
Q 045798 840 IGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLG-SEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFAR 918 (1008)
Q Consensus 840 L~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~ 918 (1008)
|+|||+++..... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||...... ..+.....
T Consensus 173 L~DFG~a~~~~~~-------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~l~~i~~ 244 (367)
T 2fst_X 173 ILDFGLARHTADE-------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILR 244 (367)
T ss_dssp ECC----------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHH
T ss_pred Eeecccccccccc-------CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHH
Confidence 9999999865432 123458999999999877 67899999999999999999999998643211 11111111
Q ss_pred hhCCcchhhhhcccccCchHHhhhhhhhhhccc-cch-hHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 919 MALPNQVMDIVDPILRNDEEILASTDKCRRMQT-GIN-SRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 919 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
....+. .+.+...-.... ..........+. ... .....+..+.+++.+||+.||.+|||++|+++
T Consensus 245 ~~g~p~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~ 311 (367)
T 2fst_X 245 LVGTPG-AELLKKISSESA--RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 311 (367)
T ss_dssp HHCSCC-HHHHTTCCCHHH--HHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HhCCCC-HHHHHHhhhHHH--HHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence 111111 111111000000 000000000000 000 00123456899999999999999999999986
No 198
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=9.1e-37 Score=355.78 Aligned_cols=345 Identities=29% Similarity=0.396 Sum_probs=200.4
Q ss_pred CccCCeeeecCCCCCCCCCccccCCCCCCEEEccCCCCCCccCcccccCcCcceEeeeccccccCCCccccccCCCCeee
Q 045798 77 LSFLREINLSNNTIQGEIPPEFGRLFRLEALFLSNNSLVGKIPANLSYCSRLTVLCIEYNKLQGRIPLEFVSLSKLKDLS 156 (1008)
Q Consensus 77 l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 156 (1008)
+++|++|+++++.++ .+| .+..+++|++|+|++|.+++..| ++.+++|++|++++|.+++..+ +.++++|++|+
T Consensus 45 l~~l~~L~l~~~~i~-~l~-~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~ 118 (466)
T 1o6v_A 45 LDQVTTLQADRLGIK-SID-GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLT 118 (466)
T ss_dssp HHTCCEEECCSSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEE
T ss_pred hccccEEecCCCCCc-cCc-chhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEE
Confidence 445555566555555 333 25555666666666666553332 5555666666666666554333 55556666666
Q ss_pred cccccCCCCCCCCCccccccchhhcccccCCCCCCccccCCCCCcEEEecCCcccccCCccccCCCCcceeccccccccc
Q 045798 157 LAKNKLTGGIPPFLGNLTSLEVLSLAGNSFGRNIPDSLGQLKQLKILAIGGNNLSGPIPPSIYNLSFLVVFSVSHNQIHG 236 (1008)
Q Consensus 157 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~ 236 (1008)
+++|++++..+ +.++++|++|++++|.+.+ ++ .++.+++|+.|+++ |.+.+.. .+.++++|+.|++++|.+.
T Consensus 119 L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~l~-~~~~~~~--~~~~l~~L~~L~l~~n~l~- 190 (466)
T 1o6v_A 119 LFNNQITDIDP--LKNLTNLNRLELSSNTISD-IS-ALSGLTSLQQLSFG-NQVTDLK--PLANLTTLERLDISSNKVS- 190 (466)
T ss_dssp CCSSCCCCCGG--GTTCTTCSEEEEEEEEECC-CG-GGTTCTTCSEEEEE-ESCCCCG--GGTTCTTCCEEECCSSCCC-
T ss_pred CCCCCCCCChH--HcCCCCCCEEECCCCccCC-Ch-hhccCCcccEeecC-CcccCch--hhccCCCCCEEECcCCcCC-
Confidence 66666553322 5555666666666665543 22 35556666666664 3333221 2555666666666666655
Q ss_pred cCChhhhhcCCCCcEEEeccccCCCCCCcccccCCCCceeecccccccccccccccCCCcccccccccccCCCCCCCccc
Q 045798 237 SLPPSLGLLLPNLKFFQIHHNFFSGSIPISLSNASKLEHIEIANNNFSGKLSVNFGGMKNLSLLNLQFSNLGSGESDEMG 316 (1008)
Q Consensus 237 ~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 316 (1008)
.++. +..+++|++|++++|.+.+..| +..+++|++|++++|++.+. ..+..+++|+.|++++|++....
T Consensus 191 ~~~~--l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~----- 259 (466)
T 1o6v_A 191 DISV--LAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLA----- 259 (466)
T ss_dssp CCGG--GGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCG-----
T ss_pred CChh--hccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccch-----
Confidence 2322 2335566666666666654433 45566666666666666543 23455555555555555554322
Q ss_pred ccccccccCCCcEEEecCCcCCccCChhhhhhcccceeeeeccccccCCCCCccccccccceEEecCccccCCcchhccC
Q 045798 317 FMNSLTNCSKLRVLSLGGNQFRGALPHSIANLSSQLQILILSSNQFYGSIPLGIGNLVDLYLLGMVENQFTGAIPKEMGK 396 (1008)
Q Consensus 317 ~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 396 (1008)
.+..+++|+.|++++|++++..+ +..+. +|+.|++++|++++..+ +..+++|+.|++++|++++..| +..
T Consensus 260 ---~~~~l~~L~~L~l~~n~l~~~~~--~~~l~-~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~ 329 (466)
T 1o6v_A 260 ---PLSGLTKLTELKLGANQISNISP--LAGLT-ALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSS 329 (466)
T ss_dssp ---GGTTCTTCSEEECCSSCCCCCGG--GTTCT-TCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGG
T ss_pred ---hhhcCCCCCEEECCCCccCcccc--ccCCC-ccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hcc
Confidence 24556666666666666664322 44443 47777777777664433 6667777777777777776554 566
Q ss_pred CCCCceEEccCCcccccccccccCCCCcceeeccccccccccCCCCcCCCcccEeecccccccC
Q 045798 397 LQKLQGLDFSGNHFSGEIPSSLGNLSSLYEVFFNNNNLSGVIPFSLGNLKRLAFLEMSGNELSG 460 (1008)
Q Consensus 397 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 460 (1008)
+++|+.|++++|++++. ..+.++++|+.|++++|++++..| +..+++|+.|++++|++++
T Consensus 330 l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 330 LTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp CTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEEEC
T ss_pred CccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCCcccC
Confidence 77777777777777643 356677777777777777776665 6677777777777777763
No 199
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=3.5e-38 Score=352.13 Aligned_cols=267 Identities=20% Similarity=0.243 Sum_probs=194.5
Q ss_pred HhcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhhcC-CCCceeeeecccccc---ccC
Q 045798 682 ATNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKNIR-HRNLVKVITSCSSID---FQG 757 (1008)
Q Consensus 682 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~---~~~ 757 (1008)
...+|++.+.||+|+||.||+|++..+++.||||++........+.+.+|+.+++++. ||||+++++++.... ...
T Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~ 105 (337)
T 3ll6_A 26 GELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTG 105 (337)
T ss_dssp TTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTS
T ss_pred cCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccC
Confidence 3457999999999999999999998899999999997666666778999999999995 999999999874321 245
Q ss_pred CceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCC--ceeccCCCCCeeecCC
Q 045798 758 NDFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEP--ILHCDLKPSNILLDND 835 (1008)
Q Consensus 758 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~--ivH~Dlkp~NIll~~~ 835 (1008)
....++||||+ +|+|.+++...... ..+++..++.++.||+.||+|||+. + |+||||||+||+++.+
T Consensus 106 ~~~~~lv~e~~-~g~L~~~l~~~~~~-------~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~ 174 (337)
T 3ll6_A 106 QAEFLLLTELC-KGQLVEFLKKMESR-------GPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQ 174 (337)
T ss_dssp SEEEEEEEECC-SEEHHHHHHHHHTT-------CSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTT
T ss_pred CceEEEEEEec-CCCHHHHHHHhhcc-------CCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCC
Confidence 56689999999 57999988652211 1689999999999999999999997 7 9999999999999999
Q ss_pred CCeEEcccCcccccccccCccc--------cccccccccccccCcccc---CCCCCCcccchhhHHHHHHHHHhCCCCCC
Q 045798 836 LSGHIGDFGLARFHQEVSNSTL--------SSSVGVKGTIGYTAPEYG---LGSEVSTNGDVYSYGILLLEMVTAKKPTD 904 (1008)
Q Consensus 836 ~~~kL~Dfg~a~~~~~~~~~~~--------~~~~~~~gt~~y~aPE~~---~~~~~~~~sDvwslG~vl~elltG~~pf~ 904 (1008)
+.+||+|||+++.......... .......||+.|+|||++ .+..++.++|||||||++|||++|+.||.
T Consensus 175 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~ 254 (337)
T 3ll6_A 175 GTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFE 254 (337)
T ss_dssp SCEEBCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-
T ss_pred CCEEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCc
Confidence 9999999999987654332111 011134589999999998 56678999999999999999999999986
Q ss_pred ccccCCccHHHHHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHH
Q 045798 905 VMFEGDLNLHNFARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNV 984 (1008)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ev 984 (1008)
...... . ......... ....+..+.+++.+||+.||.+|||+.|+
T Consensus 255 ~~~~~~-----~------------~~~~~~~~~------------------~~~~~~~~~~li~~~l~~~p~~Rps~~e~ 299 (337)
T 3ll6_A 255 DGAKLR-----I------------VNGKYSIPP------------------HDTQYTVFHSLIRAMLQVNPEERLSIAEV 299 (337)
T ss_dssp ----------------------------CCCCT------------------TCCSSGGGHHHHHHHSCSSGGGSCCHHHH
T ss_pred chhHHH-----h------------hcCcccCCc------------------ccccchHHHHHHHHHccCChhhCcCHHHH
Confidence 321110 0 000000000 00112236789999999999999999999
Q ss_pred HHHHHHHHHH
Q 045798 985 VHELQSVKNI 994 (1008)
Q Consensus 985 l~~L~~i~~~ 994 (1008)
++.|+.+...
T Consensus 300 l~~l~~~~~~ 309 (337)
T 3ll6_A 300 VHQLQEIAAA 309 (337)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhc
Confidence 9999998764
No 200
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=1.3e-38 Score=346.16 Aligned_cols=258 Identities=26% Similarity=0.382 Sum_probs=206.2
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhhcCCCCceeeeeccccccc-------
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKNIRHRNLVKVITSCSSIDF------- 755 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~------- 755 (1008)
.++|++.+.||+|+||.||+|.+..+++.||+|+++... +.+.+|++++++++||||+++++++....+
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 85 (284)
T 2a19_B 10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSK 85 (284)
T ss_dssp HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC------
T ss_pred ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccc
Confidence 457999999999999999999998899999999997542 356789999999999999999998654221
Q ss_pred ----cCCceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCee
Q 045798 756 ----QGNDFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNIL 831 (1008)
Q Consensus 756 ----~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIl 831 (1008)
......++||||+++++|.+++..... ..+++..++.++.||+.||+|||+. +|+||||||+||+
T Consensus 86 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--------~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil 154 (284)
T 2a19_B 86 NSSRSKTKCLFIQMEFCDKGTLEQWIEKRRG--------EKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIF 154 (284)
T ss_dssp ---CCEEEEEEEEECCCCSCBHHHHHHHGGG--------SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEE
T ss_pred cccccCcceEEEEEeccCCCCHHHHHhhccC--------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEE
Confidence 224568999999999999999975421 1689999999999999999999998 9999999999999
Q ss_pred ecCCCCeEEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCc
Q 045798 832 LDNDLSGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDL 911 (1008)
Q Consensus 832 l~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~ 911 (1008)
++.++.+||+|||.+........ .....||+.|+|||++.+..++.++||||||+++|||++|..|+....
T Consensus 155 ~~~~~~~kl~Dfg~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~---- 225 (284)
T 2a19_B 155 LVDTKQVKIGDFGLVTSLKNDGK-----RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETS---- 225 (284)
T ss_dssp EEETTEEEECCCTTCEESSCCSC-----CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHH----
T ss_pred EcCCCCEEECcchhheecccccc-----ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHH----
Confidence 99999999999999986654322 123458999999999999899999999999999999999998863210
Q ss_pred cHHHHHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHHHHHH
Q 045798 912 NLHNFARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHELQSV 991 (1008)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~i 991 (1008)
.... ...+..+. ...+..+.+++.+||+.||.+|||+.|+++.|+.+
T Consensus 226 ---~~~~--------~~~~~~~~----------------------~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~ 272 (284)
T 2a19_B 226 ---KFFT--------DLRDGIIS----------------------DIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVW 272 (284)
T ss_dssp ---HHHH--------HHHTTCCC----------------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ---HHHH--------Hhhccccc----------------------ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 0000 00000000 01234578999999999999999999999999988
Q ss_pred HHHHHH
Q 045798 992 KNILLE 997 (1008)
Q Consensus 992 ~~~~~~ 997 (1008)
++....
T Consensus 273 ~~~~~~ 278 (284)
T 2a19_B 273 KKSPEK 278 (284)
T ss_dssp TC----
T ss_pred hhCCCc
Confidence 766443
No 201
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=6.3e-37 Score=357.12 Aligned_cols=347 Identities=26% Similarity=0.359 Sum_probs=222.9
Q ss_pred cCCCCCCEEEccCCCCCCccCcccccCcCcceEeeeccccccCCCccccccCCCCeeecccccCCCCCCCCCccccccch
Q 045798 99 GRLFRLEALFLSNNSLVGKIPANLSYCSRLTVLCIEYNKLQGRIPLEFVSLSKLKDLSLAKNKLTGGIPPFLGNLTSLEV 178 (1008)
Q Consensus 99 ~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 178 (1008)
..+.+|+.|++++|.+. .+|. +..+++|++|+|++|.+++..+ +.++++|++|++++|++++..+ ++++++|++
T Consensus 43 ~~l~~l~~L~l~~~~i~-~l~~-~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~ 116 (466)
T 1o6v_A 43 TDLDQVTTLQADRLGIK-SIDG-VEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTG 116 (466)
T ss_dssp HHHHTCCEEECCSSCCC-CCTT-GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCE
T ss_pred hHhccccEEecCCCCCc-cCcc-hhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCE
Confidence 45788999999999998 4664 8889999999999999996544 8899999999999999985544 888999999
Q ss_pred hhcccccCCCCCCccccCCCCCcEEEecCCcccccCCccccCCCCcceeccccccccccCChhhhhcCCCCcEEEecccc
Q 045798 179 LSLAGNSFGRNIPDSLGQLKQLKILAIGGNNLSGPIPPSIYNLSFLVVFSVSHNQIHGSLPPSLGLLLPNLKFFQIHHNF 258 (1008)
Q Consensus 179 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~lp~~~~~~l~~L~~L~L~~N~ 258 (1008)
|++++|.+++..+ +..+++|++|++++|.+++. ..+..+++|+.|+++ |.+. .++. +..+++|+.|++++|.
T Consensus 117 L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~-~~~~-~~~~--~~~l~~L~~L~l~~n~ 188 (466)
T 1o6v_A 117 LTLFNNQITDIDP--LKNLTNLNRLELSSNTISDI--SALSGLTSLQQLSFG-NQVT-DLKP--LANLTTLERLDISSNK 188 (466)
T ss_dssp EECCSSCCCCCGG--GTTCTTCSEEEEEEEEECCC--GGGTTCTTCSEEEEE-ESCC-CCGG--GTTCTTCCEEECCSSC
T ss_pred EECCCCCCCCChH--HcCCCCCCEEECCCCccCCC--hhhccCCcccEeecC-Cccc-Cchh--hccCCCCCEEECcCCc
Confidence 9999999876543 88899999999999988853 347888888888886 4454 2322 4456777777777777
Q ss_pred CCCCCCcccccCCCCceeecccccccccccccccCCCcccccccccccCCCCCCCcccccccccccCCCcEEEecCCcCC
Q 045798 259 FSGSIPISLSNASKLEHIEIANNNFSGKLSVNFGGMKNLSLLNLQFSNLGSGESDEMGFMNSLTNCSKLRVLSLGGNQFR 338 (1008)
Q Consensus 259 l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~ 338 (1008)
+.+. ..+..+++|++|++++|.+.+..+ +..+++|+.|++++|++... ..+..+++
T Consensus 189 l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--------~~l~~l~~------------ 244 (466)
T 1o6v_A 189 VSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--------GTLASLTN------------ 244 (466)
T ss_dssp CCCC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--------GGGGGCTT------------
T ss_pred CCCC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--------hhhhcCCC------------
Confidence 7643 236677777777777777765544 44455555555555554432 12334444
Q ss_pred ccCChhhhhhcccceeeeeccccccCCCCCccccccccceEEecCccccCCcchhccCCCCCceEEccCCcccccccccc
Q 045798 339 GALPHSIANLSSQLQILILSSNQFYGSIPLGIGNLVDLYLLGMVENQFTGAIPKEMGKLQKLQGLDFSGNHFSGEIPSSL 418 (1008)
Q Consensus 339 ~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 418 (1008)
|++|++++|.+++..| +..+++|+.|++++|++++..+ +..+++|+.|+|++|++.+..+ +
T Consensus 245 -------------L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~ 305 (466)
T 1o6v_A 245 -------------LTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--I 305 (466)
T ss_dssp -------------CSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--G
T ss_pred -------------CCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--h
Confidence 4455555554443322 4455555555555555554333 5555666666666666654332 5
Q ss_pred cCCCCcceeeccccccccccCCCCcCCCcccEeecccccccCCcchhhhhhhhhhhhhcccCccccCCCccccccccccc
Q 045798 419 GNLSSLYEVFFNNNNLSGVIPFSLGNLKRLAFLEMSGNELSGTIPEDIFNISYLSNSLNLARNHLVGIIPPRIGNLRALR 498 (1008)
Q Consensus 419 ~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~~~~~~~~~~~~L~L~~N~l~~~~p~~~~~l~~L~ 498 (1008)
..+++|+.|++++|.+++..| +..+++|+.|++++|++++ + ..++.+++|+
T Consensus 306 ~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~--------------------------~~l~~l~~L~ 356 (466)
T 1o6v_A 306 SNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSD-V--------------------------SSLANLTNIN 356 (466)
T ss_dssp GGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCC-C--------------------------GGGTTCTTCC
T ss_pred cCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCC-c--------------------------hhhccCCCCC
Confidence 555666666666666665444 4556666666666666652 1 1234445555
Q ss_pred ccccccccccCCCCcccccccccceeeccCccccc
Q 045798 499 SFDVSNNDLSGEIPIELGHCSSLEEIYLAGNLFHG 533 (1008)
Q Consensus 499 ~Ldls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 533 (1008)
.|++++|++++..| +..+++|+.|++++|++++
T Consensus 357 ~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 357 WLSAGHNQISDLTP--LANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp EEECCSSCCCBCGG--GTTCTTCCEEECCCEEEEC
T ss_pred EEeCCCCccCccch--hhcCCCCCEEeccCCcccC
Confidence 55555555554443 4455555555555555553
No 202
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=1e-38 Score=353.47 Aligned_cols=278 Identities=23% Similarity=0.313 Sum_probs=195.9
Q ss_pred cCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccc-hhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCceEE
Q 045798 684 NGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCE-GASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 762 (1008)
Q Consensus 684 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 762 (1008)
++|++.+.||+|+||+||+|.+..+++.||+|+++.... .....+.+|++++++++||||+++++++ ..++..+
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~~ 76 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDII-----HTEKSLT 76 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEE-----ECSSCEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEE-----eeCCEEE
Confidence 579999999999999999999988999999999975432 2223566899999999999999999995 4566799
Q ss_pred EEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeEEcc
Q 045798 763 IVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGHIGD 842 (1008)
Q Consensus 763 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 842 (1008)
+||||++ |+|.+++..... .+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 77 lv~e~~~-~~l~~~~~~~~~---------~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~D 143 (324)
T 3mtl_A 77 LVFEYLD-KDLKQYLDDCGN---------IINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLAD 143 (324)
T ss_dssp EEEECCS-EEHHHHHHHTTT---------CCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECS
T ss_pred EEecccc-cCHHHHHHhcCC---------CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEcc
Confidence 9999996 699998876532 589999999999999999999998 999999999999999999999999
Q ss_pred cCcccccccccCccccccccccccccccCccccCC-CCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHHhhC
Q 045798 843 FGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLG-SEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFARMAL 921 (1008)
Q Consensus 843 fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~~~~ 921 (1008)
||+++........ .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||......+ ..........
T Consensus 144 fg~a~~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~i~~~~~ 218 (324)
T 3mtl_A 144 FGLARAKSIPTKT----YDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEE-QLHFIFRILG 218 (324)
T ss_dssp SSEEECC----------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHC
T ss_pred CcccccccCCccc----cccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhC
Confidence 9999855432221 223458999999999876 568999999999999999999999997532211 1111111111
Q ss_pred CcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 922 PNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 922 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
... ............ .....................+.++.+++.+||+.||++|||++|+++
T Consensus 219 ~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 219 TPT-EETWPGILSNEE-FKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp CCC-TTTSTTGGGCHH-HHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred CCC-hHhchhhhcchh-hcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 110 000000000000 000000000000000011124556789999999999999999999986
No 203
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=8.1e-38 Score=351.71 Aligned_cols=257 Identities=21% Similarity=0.319 Sum_probs=203.2
Q ss_pred HHHHHhcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccc--------hhhHHHHHHHHHHhhc-CCCCceeeee
Q 045798 678 SLLKATNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCE--------GASKSFMAECKALKNI-RHRNLVKVIT 748 (1008)
Q Consensus 678 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l-~h~niv~~~~ 748 (1008)
......++|++.+.||+|+||.||+|.+..+|+.||||+++.... ...+.+.+|+++++++ +||||+++++
T Consensus 88 ~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~ 167 (365)
T 2y7j_A 88 AAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLID 167 (365)
T ss_dssp HHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEE
T ss_pred hhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEE
Confidence 334456789999999999999999999988899999999875431 1245688999999999 8999999999
Q ss_pred ccccccccCCceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCC
Q 045798 749 SCSSIDFQGNDFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPS 828 (1008)
Q Consensus 749 ~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~ 828 (1008)
++ ......++||||+++++|.+++.... .+++..+..++.||+.||+|||+. ||+||||||+
T Consensus 168 ~~-----~~~~~~~lv~e~~~g~~L~~~l~~~~----------~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~ 229 (365)
T 2y7j_A 168 SY-----ESSSFMFLVFDLMRKGELFDYLTEKV----------ALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPE 229 (365)
T ss_dssp EE-----EBSSEEEEEECCCTTCBHHHHHHHHS----------SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGG
T ss_pred EE-----eeCCEEEEEEEeCCCCcHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHH
Confidence 84 45677999999999999999987543 689999999999999999999998 9999999999
Q ss_pred CeeecCCCCeEEcccCcccccccccCccccccccccccccccCccccCC------CCCCcccchhhHHHHHHHHHhCCCC
Q 045798 829 NILLDNDLSGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLG------SEVSTNGDVYSYGILLLEMVTAKKP 902 (1008)
Q Consensus 829 NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~sDvwslG~vl~elltG~~p 902 (1008)
||+++.++.+||+|||++........ .....||+.|+|||++.+ ..++.++|||||||++|||++|+.|
T Consensus 230 NIl~~~~~~ikl~DfG~~~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~p 304 (365)
T 2y7j_A 230 NILLDDNMQIRLSDFGFSCHLEPGEK-----LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPP 304 (365)
T ss_dssp GEEECTTCCEEECCCTTCEECCTTCC-----BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCS
T ss_pred HEEECCCCCEEEEecCcccccCCCcc-----cccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCC
Confidence 99999999999999999986654322 123568999999998753 3588999999999999999999999
Q ss_pred CCccccCCccHHHHHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHH
Q 045798 903 TDVMFEGDLNLHNFARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMT 982 (1008)
Q Consensus 903 f~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ 982 (1008)
|...... ........ ..... ..+.....+..+.+++.+||+.||++|||++
T Consensus 305 f~~~~~~-~~~~~i~~------------~~~~~----------------~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ 355 (365)
T 2y7j_A 305 FWHRRQI-LMLRMIME------------GQYQF----------------SSPEWDDRSSTVKDLISRLLQVDPEARLTAE 355 (365)
T ss_dssp SCCSSHH-HHHHHHHH------------TCCCC----------------CHHHHSSSCHHHHHHHHHHSCSSTTTSCCHH
T ss_pred CCCCCHH-HHHHHHHh------------CCCCC----------------CCcccccCCHHHHHHHHHHcCCChhHCcCHH
Confidence 8642110 00000000 00000 0001112345689999999999999999999
Q ss_pred HHHH
Q 045798 983 NVVH 986 (1008)
Q Consensus 983 evl~ 986 (1008)
|+++
T Consensus 356 ell~ 359 (365)
T 2y7j_A 356 QALQ 359 (365)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 9986
No 204
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=1.4e-37 Score=351.15 Aligned_cols=282 Identities=20% Similarity=0.183 Sum_probs=197.8
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccc--cchhhHHHHHHHHHHhhcCCCCceeeeecccccc-ccCCc
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQ--CEGASKSFMAECKALKNIRHRNLVKVITSCSSID-FQGND 759 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~~~ 759 (1008)
.++|++.+.||+|+||.||+|.+..+++.||||++... .....+.+.+|+.+++.++||||+++++++.... .....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 46899999999999999999999989999999999753 2344567899999999999999999999965432 23334
Q ss_pred eEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeE
Q 045798 760 FKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGH 839 (1008)
Q Consensus 760 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 839 (1008)
..++||||++ ++|.+++.. .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+|
T Consensus 104 ~~~lv~e~~~-~~l~~~~~~------------~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~k 167 (371)
T 2xrw_A 104 DVYIVMELMD-ANLCQVIQM------------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLK 167 (371)
T ss_dssp EEEEEEECCS-EEHHHHHHS------------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEE
T ss_pred ceEEEEEcCC-CCHHHHHhh------------ccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEE
Confidence 7899999995 578888742 578899999999999999999998 999999999999999999999
Q ss_pred EcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHHh
Q 045798 840 IGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFARM 919 (1008)
Q Consensus 840 L~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~~ 919 (1008)
|+|||+++....... .....||+.|+|||++.+..++.++|||||||++|||++|+.||......+ .+......
T Consensus 168 l~Dfg~a~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~ 241 (371)
T 2xrw_A 168 ILDFGLARTAGTSFM-----MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHID-QWNKVIEQ 241 (371)
T ss_dssp ECCCCC---------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHC-
T ss_pred EEEeecccccccccc-----cCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHH
Confidence 999999986543211 123458999999999999999999999999999999999999986432111 11111110
Q ss_pred hCCcchhhhhccc---c----cCchH----HhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHH
Q 045798 920 ALPNQVMDIVDPI---L----RNDEE----ILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHE 987 (1008)
Q Consensus 920 ~~~~~~~~~~d~~---l----~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 987 (1008)
......+..... . ...+. ..........++.........+.++.+++.+||+.||++|||++|+++.
T Consensus 242 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 242 -LGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp -CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred -hCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 000000000000 0 00000 0000000000111111223457789999999999999999999999873
No 205
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=3.9e-38 Score=342.23 Aligned_cols=254 Identities=24% Similarity=0.283 Sum_probs=196.2
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEecccc-chhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCceE
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQC-EGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDFK 761 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 761 (1008)
.++|.+.+.||+|+||.||+|.+..+++.||+|++.... ....+.+.+|++++++++||||+++++++ .+....
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~~~~ 95 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVF-----EDYHNM 95 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEE-----ECSSEE
T ss_pred hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHhe-----ecCCeE
Confidence 357999999999999999999999899999999997543 33457899999999999999999999995 456679
Q ss_pred EEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeee---cCCCCe
Q 045798 762 AIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILL---DNDLSG 838 (1008)
Q Consensus 762 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~ 838 (1008)
++||||+++|+|.+++..... ....+++..++.++.|++.||+|||+. +|+||||||+||++ +.++.+
T Consensus 96 ~lv~e~~~~~~L~~~l~~~~~------~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~ 166 (285)
T 3is5_A 96 YIVMETCEGGELLERIVSAQA------RGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPI 166 (285)
T ss_dssp EEEECCCSCCBHHHHHHHHHH------HTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCE
T ss_pred EEEEEeCCCCcHHHHHHhhhh------cccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCE
Confidence 999999999999998854311 012689999999999999999999998 99999999999999 456889
Q ss_pred EEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHH
Q 045798 839 HIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFAR 918 (1008)
Q Consensus 839 kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~ 918 (1008)
||+|||++........ .....||+.|+|||++. ..++.++||||||+++|||++|+.||......+ ......
T Consensus 167 kl~Dfg~a~~~~~~~~-----~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~--~~~~~~ 238 (285)
T 3is5_A 167 KIIDFGLAELFKSDEH-----STNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEE--VQQKAT 238 (285)
T ss_dssp EECCCCCCCC---------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHH
T ss_pred EEEeeecceecCCccc-----CcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHH--HHhhhc
Confidence 9999999986544322 12345899999999875 568999999999999999999999986432110 000000
Q ss_pred hhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 919 MALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 919 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
...+ .... .....+.++.+++.+||+.||++|||+.|+++
T Consensus 239 ~~~~---------~~~~-------------------~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 239 YKEP---------NYAV-------------------ECRPLTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp HCCC---------CCCC---------------------CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred cCCc---------cccc-------------------ccCcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0000 0000 00012345789999999999999999999985
No 206
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.7e-38 Score=356.32 Aligned_cols=274 Identities=14% Similarity=0.150 Sum_probs=205.8
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcC--------CCeEEEEEEeccccchhhHHHHHHHHHHhhcCCCCceeeeecccc--
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDE--------DGIVVAIKVINLQCEGASKSFMAECKALKNIRHRNLVKVITSCSS-- 752 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-- 752 (1008)
.++|++.+.||+|+||.||+|++.. .++.||+|++... +.+.+|++++++++||||+++++....
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 115 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTP 115 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence 3689999999999999999999976 4889999998643 468899999999999999984332111
Q ss_pred ---------ccccCCceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceec
Q 045798 753 ---------IDFQGNDFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHC 823 (1008)
Q Consensus 753 ---------~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~ 823 (1008)
.....+...++||||+ +++|.+++..... ..+++..++.++.||+.||+|||+. +|+||
T Consensus 116 ~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~--------~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~ 183 (352)
T 2jii_A 116 LLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPK--------HVLSERSVLQVACRLLDALEFLHEN---EYVHG 183 (352)
T ss_dssp TCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGG--------GCCCHHHHHHHHHHHHHHHHHHHHT---TCBCS
T ss_pred ccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCc--------CCCCHHHHHHHHHHHHHHHHHHHhC---CccCC
Confidence 0122367789999999 9999999976521 2789999999999999999999998 99999
Q ss_pred cCCCCCeeecCCC--CeEEcccCcccccccccCccc---cccccccccccccCccccCCCCCCcccchhhHHHHHHHHHh
Q 045798 824 DLKPSNILLDNDL--SGHIGDFGLARFHQEVSNSTL---SSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVT 898 (1008)
Q Consensus 824 Dlkp~NIll~~~~--~~kL~Dfg~a~~~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt 898 (1008)
||||+||+++.++ .+||+|||+++.......... .......||+.|+|||++.+..++.++|||||||++|||++
T Consensus 184 Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~ 263 (352)
T 2jii_A 184 NVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLY 263 (352)
T ss_dssp CCCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHh
Confidence 9999999999998 899999999987654332111 11233469999999999999999999999999999999999
Q ss_pred CCCCCCccccCCccHHHHHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCC
Q 045798 899 AKKPTDVMFEGDLNLHNFARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDR 978 (1008)
Q Consensus 899 G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 978 (1008)
|+.||................. ......+.+. .......+.++.+++.+||+.||++|
T Consensus 264 g~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~---------------------~~~~~~~~~~l~~li~~~l~~dp~~R 321 (352)
T 2jii_A 264 GFLPWTNCLPNTEDIMKQKQKF-VDKPGPFVGP---------------------CGHWIRPSETLQKYLKVVMALTYEEK 321 (352)
T ss_dssp SCCTTGGGTTCHHHHHHHHHHH-HHSCCCEECT---------------------TSCEECCCHHHHHHHHHHHTCCTTCC
T ss_pred CCCCcccCCcCHHHHHHHHHhc-cCChhhhhhh---------------------ccccCCCcHHHHHHHHHHHhCChhhC
Confidence 9999975432211111111100 0000000000 00001134568999999999999999
Q ss_pred CCHHHHHHHHHHHHHHH
Q 045798 979 MNMTNVVHELQSVKNIL 995 (1008)
Q Consensus 979 Pt~~evl~~L~~i~~~~ 995 (1008)
||++||++.|+++.+..
T Consensus 322 ps~~~l~~~L~~~~~~~ 338 (352)
T 2jii_A 322 PPYAMLRNNLEALLQDL 338 (352)
T ss_dssp CCHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHhc
Confidence 99999999999887653
No 207
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=1.1e-38 Score=369.16 Aligned_cols=256 Identities=30% Similarity=0.453 Sum_probs=199.9
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCceEE
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 762 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 762 (1008)
.++|++.+.||+|+||.||+|.+. .+..||||+++... ...+.+.+|++++++++||||+++++++.. +..+
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~------~~~~ 254 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWN-GTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE------EPIY 254 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS------SSCE
T ss_pred hhHceeeeeecCCCCeEEEEEEEC-CCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC------CceE
Confidence 467889999999999999999996 56789999998543 335689999999999999999999998632 4579
Q ss_pred EEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeEEcc
Q 045798 763 IVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGHIGD 842 (1008)
Q Consensus 763 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 842 (1008)
+||||+++|+|.+++.... ...+++.++..++.||+.||+|||+. +|+||||||+||++++++.+||+|
T Consensus 255 iv~e~~~~gsL~~~l~~~~--------~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~D 323 (452)
T 1fmk_A 255 IVTEYMSKGSLLDFLKGET--------GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVAD 323 (452)
T ss_dssp EEECCCTTCBHHHHHSHHH--------HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECC
T ss_pred EEehhhcCCCHHHHHHhcC--------CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECC
Confidence 9999999999999997432 11589999999999999999999998 999999999999999999999999
Q ss_pred cCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHh-CCCCCCccccCCccHHHHHHhhC
Q 045798 843 FGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVT-AKKPTDVMFEGDLNLHNFARMAL 921 (1008)
Q Consensus 843 fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-G~~pf~~~~~~~~~~~~~~~~~~ 921 (1008)
||+++........ ......++..|+|||++.+..++.++|||||||++|||++ |+.||...... ....
T Consensus 324 fG~a~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~-----~~~~--- 392 (452)
T 1fmk_A 324 FGLARLIEDNEYT---ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR-----EVLD--- 392 (452)
T ss_dssp CCTTC-----------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-----HHHH---
T ss_pred CccceecCCCcee---cccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHH-----HHHH---
Confidence 9999866432211 1223347889999999988899999999999999999999 99998642111 0000
Q ss_pred CcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHHHHHHH
Q 045798 922 PNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHELQSVK 992 (1008)
Q Consensus 922 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~i~ 992 (1008)
.+... .+++ ....++..+.+++.+||+.||++|||++++++.|+.+.
T Consensus 393 ------~i~~~--------------~~~~----~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~ 439 (452)
T 1fmk_A 393 ------QVERG--------------YRMP----CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 439 (452)
T ss_dssp ------HHHTT--------------CCCC----CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTT
T ss_pred ------HHHcC--------------CCCC----CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence 00000 0000 01134567899999999999999999999999998754
No 208
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=4e-38 Score=342.23 Aligned_cols=247 Identities=23% Similarity=0.361 Sum_probs=202.0
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEecccc---chhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCc
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQC---EGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGND 759 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 759 (1008)
.++|++.+.||+|+||.||+|.+..+++.||+|++.... ....+.+.+|++++++++||||+++++++ ..++
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~ 87 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYF-----HDRK 87 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEE-----ECSS
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEE-----EcCC
Confidence 467999999999999999999998899999999986432 23346799999999999999999999994 4567
Q ss_pred eEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeE
Q 045798 760 FKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGH 839 (1008)
Q Consensus 760 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 839 (1008)
..++||||+++++|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 88 ~~~lv~e~~~~~~L~~~l~~~~----------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~k 154 (284)
T 2vgo_A 88 RIYLMLEFAPRGELYKELQKHG----------RFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELK 154 (284)
T ss_dssp EEEEEECCCTTEEHHHHHHHHS----------SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEE
T ss_pred EEEEEEEeCCCCcHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEE
Confidence 7999999999999999997543 689999999999999999999997 999999999999999999999
Q ss_pred EcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHHh
Q 045798 840 IGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFARM 919 (1008)
Q Consensus 840 L~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~~ 919 (1008)
|+|||.+....... .....|++.|+|||++.+..++.++||||||+++|+|++|+.||......+ ...
T Consensus 155 l~Dfg~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-----~~~- 222 (284)
T 2vgo_A 155 IADFGWSVHAPSLR------RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE-----THR- 222 (284)
T ss_dssp ECCCTTCEECSSSC------BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH-----HHH-
T ss_pred EecccccccCcccc------cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhH-----HHH-
Confidence 99999997544321 123458999999999999999999999999999999999999986431110 000
Q ss_pred hCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 920 ALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 920 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
.+..... .++ ...+..+.+++.+||+.||.+|||++|+++
T Consensus 223 -------~~~~~~~--------------~~~------~~~~~~~~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 223 -------RIVNVDL--------------KFP------PFLSDGSKDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp -------HHHTTCC--------------CCC------TTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred -------HHhcccc--------------CCC------CcCCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence 0000000 000 012445789999999999999999999986
No 209
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=4.9e-39 Score=356.42 Aligned_cols=276 Identities=22% Similarity=0.347 Sum_probs=211.1
Q ss_pred HHHHHHHhcCCCCCceEeeccCeeEEEEEEc-----CCCeEEEEEEeccccc-hhhHHHHHHHHHHhhcCCCCceeeeec
Q 045798 676 YKSLLKATNGFSSTHLIGVGSFGCVYKGALD-----EDGIVVAIKVINLQCE-GASKSFMAECKALKNIRHRNLVKVITS 749 (1008)
Q Consensus 676 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~ 749 (1008)
.++.....++|++.+.||+|+||.||+|.+. .+++.||+|++..... .....+.+|++++++++||||++++++
T Consensus 17 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~ 96 (322)
T 1p4o_A 17 PDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGV 96 (322)
T ss_dssp CCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEE
T ss_pred hhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEE
Confidence 3344456788999999999999999999875 3578899999975432 345679999999999999999999999
Q ss_pred cccccccCCceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCC
Q 045798 750 CSSIDFQGNDFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSN 829 (1008)
Q Consensus 750 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~N 829 (1008)
+ ..++..++||||+++|+|.+++...............+++..++.++.||+.||+|||+. +|+||||||+|
T Consensus 97 ~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~N 168 (322)
T 1p4o_A 97 V-----SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARN 168 (322)
T ss_dssp E-----CSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGG
T ss_pred E-----ccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccce
Confidence 5 455678999999999999999875321000000012578999999999999999999998 99999999999
Q ss_pred eeecCCCCeEEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHh-CCCCCCcccc
Q 045798 830 ILLDNDLSGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVT-AKKPTDVMFE 908 (1008)
Q Consensus 830 Ill~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-G~~pf~~~~~ 908 (1008)
|+++.++.+||+|||+++......... ......+|+.|+|||++.+..++.++|||||||++|||++ |..||.....
T Consensus 169 Ili~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~ 246 (322)
T 1p4o_A 169 CMVAEDFTVKIGDFGMTRDIYETDYYR--KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN 246 (322)
T ss_dssp EEECTTCCEEECCTTCCCGGGGGGCEE--GGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCH
T ss_pred EEEcCCCeEEECcCccccccccccccc--cccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCH
Confidence 999999999999999998654432211 1223457889999999988889999999999999999999 8888864211
Q ss_pred CCccHHHHHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHHH
Q 045798 909 GDLNLHNFARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHEL 988 (1008)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L 988 (1008)
. ...... ....... ....++..+.+++.+||+.||.+|||+.|+++.|
T Consensus 247 ~-----~~~~~~--------~~~~~~~-------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L 294 (322)
T 1p4o_A 247 E-----QVLRFV--------MEGGLLD-------------------KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI 294 (322)
T ss_dssp H-----HHHHHH--------HTTCCCC-------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred H-----HHHHHH--------HcCCcCC-------------------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHH
Confidence 1 010000 0000000 0012345688999999999999999999999999
Q ss_pred HHHHH
Q 045798 989 QSVKN 993 (1008)
Q Consensus 989 ~~i~~ 993 (1008)
+++..
T Consensus 295 ~~~~~ 299 (322)
T 1p4o_A 295 KEEME 299 (322)
T ss_dssp GGGSC
T ss_pred HHhhc
Confidence 87643
No 210
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.2e-38 Score=353.81 Aligned_cols=252 Identities=25% Similarity=0.353 Sum_probs=192.5
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEecccc--chhhHHHHHHHHHHhhcCC--CCceeeeeccccccccCC
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQC--EGASKSFMAECKALKNIRH--RNLVKVITSCSSIDFQGN 758 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~~ 758 (1008)
.++|++.+.||+|+||.||+|.+. +++.||||++.... ....+.+.+|++++++++| |||+++++++ ..+
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~-----~~~ 81 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE-----ITD 81 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECT-TSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEE-----ECS
T ss_pred cCEEEEEEEEecCCCeEEEEEEeC-CCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeE-----eeC
Confidence 467999999999999999999985 78999999987543 3345779999999999976 9999999994 456
Q ss_pred ceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCe
Q 045798 759 DFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSG 838 (1008)
Q Consensus 759 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 838 (1008)
...++|||+ .+++|.+++.... .+++.++..++.||+.||+|||+. +|+||||||+||+++ ++.+
T Consensus 82 ~~~~lv~e~-~~~~L~~~l~~~~----------~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~ 146 (343)
T 3dbq_A 82 QYIYMVMEC-GNIDLNSWLKKKK----------SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGML 146 (343)
T ss_dssp SEEEEEECC-CSEEHHHHHHHSC----------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEE
T ss_pred CEEEEEEeC-CCCCHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcE
Confidence 679999995 5889999997654 689999999999999999999998 999999999999997 5789
Q ss_pred EEcccCcccccccccCccccccccccccccccCccccCC-----------CCCCcccchhhHHHHHHHHHhCCCCCCccc
Q 045798 839 HIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLG-----------SEVSTNGDVYSYGILLLEMVTAKKPTDVMF 907 (1008)
Q Consensus 839 kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~sDvwslG~vl~elltG~~pf~~~~ 907 (1008)
||+|||+++......... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||....
T Consensus 147 kl~DFG~a~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~ 224 (343)
T 3dbq_A 147 KLIDFGIANQMQPDTTSV--VKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII 224 (343)
T ss_dssp EECCCSSSCCC--------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred EEeecccccccCcccccc--cCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhh
Confidence 999999998665432221 1223569999999999754 678899999999999999999999986432
Q ss_pred cCCccHHHHHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHH
Q 045798 908 EGDLNLHNFARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHE 987 (1008)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 987 (1008)
....... ..+++..... ++ ...+.++.+++.+||+.||.+|||+.|+++.
T Consensus 225 ~~~~~~~------------~~~~~~~~~~------------~~------~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 225 NQISKLH------------AIIDPNHEIE------------FP------DIPEKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp SHHHHHH------------HHHCTTSCCC------------CC------CCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hHHHHHH------------HHhcCCcccC------------Cc------ccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 2111111 1111100000 00 0123457899999999999999999999864
No 211
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=5.3e-39 Score=363.74 Aligned_cols=261 Identities=16% Similarity=0.136 Sum_probs=194.8
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEecc---ccchhhHHHHHHHH---HHhhcCCCCceeeeecccccc--
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINL---QCEGASKSFMAECK---ALKNIRHRNLVKVITSCSSID-- 754 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~---~~~~~~~~~~~E~~---~l~~l~h~niv~~~~~~~~~~-- 754 (1008)
.++|++.+.||+|+||.||+|.+..+|+.||||+++. ......+.+.+|++ ++++++||||+++++.+....
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 4678999999999999999999988899999999973 23445678999994 555558999999985433110
Q ss_pred ccCC------------c-----eEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCC
Q 045798 755 FQGN------------D-----FKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQ 817 (1008)
Q Consensus 755 ~~~~------------~-----~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ 817 (1008)
+..+ + ..|+||||+ +|+|.+++....... +....+++..++.|+.||+.||+|||+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~---~~~~~l~~~~~~~i~~qi~~aL~~LH~~-- 225 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHS---STHKSLVHHARLQLTLQVIRLLASLHHY-- 225 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTT---TTTHHHHHHHHHHHHHHHHHHHHHHHHT--
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccc---cccccccHHHHHHHHHHHHHHHHHHHhC--
Confidence 1111 1 378999999 689999997542110 0112456788999999999999999998
Q ss_pred CCceeccCCCCCeeecCCCCeEEcccCcccccccccCccccccccccccccccCccccCCC-----------CCCcccch
Q 045798 818 EPILHCDLKPSNILLDNDLSGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGS-----------EVSTNGDV 886 (1008)
Q Consensus 818 ~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~sDv 886 (1008)
+|+||||||+|||++.++.+||+|||+|+..... .....| +.|+|||++.+. .++.++||
T Consensus 226 -~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~-------~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Dv 296 (377)
T 3byv_A 226 -GLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAR-------VVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDA 296 (377)
T ss_dssp -TEECSCCCGGGEEECTTCCEEECCGGGCEETTCE-------EECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHH
T ss_pred -CeecCCCCHHHEEEcCCCCEEEEechhheecCCc-------ccCCCC-cCccChhhhcccccccccccccccCChhhhH
Confidence 9999999999999999999999999999853321 123457 999999998877 89999999
Q ss_pred hhHHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHH
Q 045798 887 YSYGILLLEMVTAKKPTDVMFEGDLNLHNFARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKI 966 (1008)
Q Consensus 887 wslG~vl~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 966 (1008)
|||||++|||++|+.||........ ...... .. ...+.++.++
T Consensus 297 wSlG~il~elltg~~Pf~~~~~~~~-------------~~~~~~-~~-----------------------~~~~~~~~~l 339 (377)
T 3byv_A 297 WALGLVIYWIWCADLPITKDAALGG-------------SEWIFR-SC-----------------------KNIPQPVRAL 339 (377)
T ss_dssp HHHHHHHHHHHHSSCCC------CC-------------SGGGGS-SC-----------------------CCCCHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCcccccccc-------------hhhhhh-hc-----------------------cCCCHHHHHH
Confidence 9999999999999999864321110 000000 00 0124567899
Q ss_pred HhcccCcCCCCCCCHHHHHH--HHHHHHHHH
Q 045798 967 GVACSMESPQDRMNMTNVVH--ELQSVKNIL 995 (1008)
Q Consensus 967 i~~cl~~dP~~RPt~~evl~--~L~~i~~~~ 995 (1008)
+.+||+.||++|||+.|+++ .++++.+..
T Consensus 340 i~~~L~~dp~~Rpt~~e~l~hp~f~~~~~~~ 370 (377)
T 3byv_A 340 LEGFLRYPKEDRLLPLQAMETPEYEQLRTEL 370 (377)
T ss_dssp HHHHTCSSGGGCCCHHHHHTSHHHHHHHHHH
T ss_pred HHHHcCCCchhCCCHHHHhhChHHHHHHHHH
Confidence 99999999999999999997 455555443
No 212
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=4.7e-38 Score=343.59 Aligned_cols=250 Identities=21% Similarity=0.270 Sum_probs=203.6
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEecccc---chhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCc
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQC---EGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGND 759 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 759 (1008)
.++|.+.+.||+|+||.||+|.+..+++.||+|++.... ....+.+.+|+.+++.++||||+++++++ ..++
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-----~~~~ 88 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFF-----EDND 88 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-----ECSS
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeee-----ccCC
Confidence 467999999999999999999999899999999986432 34456789999999999999999999995 4566
Q ss_pred eEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeE
Q 045798 760 FKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGH 839 (1008)
Q Consensus 760 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 839 (1008)
..++||||+++++|.+++.... .+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 89 ~~~lv~e~~~~~~L~~~~~~~~----------~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~k 155 (294)
T 2rku_A 89 FVFVVLELCRRRSLLELHKRRK----------ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVK 155 (294)
T ss_dssp EEEEEEECCTTCBHHHHHHHHC----------SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEE
T ss_pred EEEEEEecCCCCCHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEE
Confidence 7999999999999999886543 689999999999999999999998 999999999999999999999
Q ss_pred EcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHHh
Q 045798 840 IGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFARM 919 (1008)
Q Consensus 840 L~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~~ 919 (1008)
|+|||.+......... .....||+.|+|||++.+..++.++||||||+++|+|++|+.||...... ..+...
T Consensus 156 l~dfg~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~----~~~~~~ 227 (294)
T 2rku_A 156 IGDFGLATKVEYDGER----KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK----ETYLRI 227 (294)
T ss_dssp ECCCTTCEECCSTTCC----BCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH----HHHHHH
T ss_pred EEeccCceecccCccc----cccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHH
Confidence 9999999865432221 12345899999999999988999999999999999999999998643211 001000
Q ss_pred hCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHH
Q 045798 920 ALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHE 987 (1008)
Q Consensus 920 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 987 (1008)
. .... ..+ ...+..+.+++.+||+.||++|||++|+++.
T Consensus 228 ~---------~~~~--------------~~~------~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 228 K---------KNEY--------------SIP------KHINPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp H---------TTCC--------------CCC------TTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred h---------hccC--------------CCc------cccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 0 0000 000 0123457899999999999999999999863
No 213
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=9.3e-38 Score=365.79 Aligned_cols=251 Identities=26% Similarity=0.298 Sum_probs=200.9
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccc--cchhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCce
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQ--CEGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDF 760 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 760 (1008)
.++|++.+.||+|+||+||+|.+..+++.||||++... .......+.+|++++++++||||+++++++ .....
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~-----~~~~~ 95 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEIL-----EDSSS 95 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEE-----ECSSE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEE-----EcCCE
Confidence 46799999999999999999999989999999998633 233457899999999999999999999994 55677
Q ss_pred EEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeec---CCCC
Q 045798 761 KAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLD---NDLS 837 (1008)
Q Consensus 761 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~---~~~~ 837 (1008)
.++||||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++ .++.
T Consensus 96 ~~lv~e~~~~~~L~~~~~~~~----------~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~ 162 (486)
T 3mwu_A 96 FYIVGELYTGGELFDEIIKRK----------RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCD 162 (486)
T ss_dssp EEEEECCCCSCBHHHHHHHHS----------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCC
T ss_pred EEEEEEcCCCCcHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCC
Confidence 999999999999999886543 789999999999999999999998 999999999999995 5567
Q ss_pred eEEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHH
Q 045798 838 GHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFA 917 (1008)
Q Consensus 838 ~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~ 917 (1008)
+||+|||+++....... .....||+.|+|||++.+ .++.++||||+||++|+|++|+.||......+ ......
T Consensus 163 ~kl~Dfg~a~~~~~~~~-----~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i~ 235 (486)
T 3mwu_A 163 IKIIDFGLSTCFQQNTK-----MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYD-ILKRVE 235 (486)
T ss_dssp EEECSCSCTTTBCCC---------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHH
T ss_pred EEEEECCcCeECCCCCc-----cCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHH
Confidence 99999999986543321 223469999999999876 58999999999999999999999986431110 000110
Q ss_pred HhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 918 RMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 918 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
.... ....+.....+.++.+++.+||+.||.+|||+.|+++
T Consensus 236 ~~~~----------------------------~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~ 276 (486)
T 3mwu_A 236 TGKY----------------------------AFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (486)
T ss_dssp HTCC----------------------------CSCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred hCCC----------------------------CCCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 0000 0001111234556789999999999999999999987
No 214
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=1.9e-38 Score=352.83 Aligned_cols=279 Identities=22% Similarity=0.271 Sum_probs=200.7
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccc--hhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCce
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCE--GASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDF 760 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 760 (1008)
.++|++.+.||+|+||.||+|++..+++.||+|++..... ...+.+.+|++++++++||||+++++++ ...+.
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~ 98 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVC-----KKKKR 98 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----EETTE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEe-----ecCCE
Confidence 4679999999999999999999998899999999864432 3346688999999999999999999995 45667
Q ss_pred EEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeEE
Q 045798 761 KAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGHI 840 (1008)
Q Consensus 761 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 840 (1008)
.++||||+++++|.++..... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 99 ~~lv~e~~~~~~l~~~~~~~~----------~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl 165 (331)
T 4aaa_A 99 WYLVFEFVDHTILDDLELFPN----------GLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKL 165 (331)
T ss_dssp EEEEEECCSEEHHHHHHHSTT----------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEE
T ss_pred EEEEEecCCcchHHHHHhhcc----------CCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEE
Confidence 899999999999988865443 689999999999999999999998 9999999999999999999999
Q ss_pred cccCcccccccccCccccccccccccccccCccccCCC-CCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHHh
Q 045798 841 GDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGS-EVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFARM 919 (1008)
Q Consensus 841 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~~ 919 (1008)
+|||.++........ .....||+.|+|||++.+. .++.++||||+||++|+|++|+.||......+. .......
T Consensus 166 ~Dfg~~~~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~~ 240 (331)
T 4aaa_A 166 CDFGFARTLAAPGEV----YDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQ-LYHIMMC 240 (331)
T ss_dssp CCCTTC----------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHH
T ss_pred EeCCCceeecCCccc----cCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHH-HHHHHHH
Confidence 999999865433221 1234589999999998775 789999999999999999999999864322111 1111111
Q ss_pred h--CCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHH
Q 045798 920 A--LPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHE 987 (1008)
Q Consensus 920 ~--~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 987 (1008)
. ..+.........-..... .........+........+..+.+++.+||+.||++|||++|+++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 241 LGNLIPRHQELFNKNPVFAGV---RLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp HCSCCHHHHHHHHHCGGGTTC---CCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred hCCCChhhhhHhhhccccccc---cCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0 000000000000000000 0000000000000011345678999999999999999999999873
No 215
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=9.5e-38 Score=363.94 Aligned_cols=252 Identities=25% Similarity=0.337 Sum_probs=201.2
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEecccc---chhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCc
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQC---EGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGND 759 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 759 (1008)
.++|.+.+.||+|+||.||+|++..+|+.||+|++.... ....+.+.+|++++++++||||++++++ +...+
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~-----~~~~~ 258 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYA-----FETKT 258 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEE-----EECSS
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEE-----EeeCC
Confidence 467999999999999999999998899999999996432 2334678999999999999999999998 45667
Q ss_pred eEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeE
Q 045798 760 FKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGH 839 (1008)
Q Consensus 760 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 839 (1008)
..|+||||+++|+|.+++...... ...+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+|
T Consensus 259 ~l~lVmE~~~gg~L~~~l~~~~~~------~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vk 329 (543)
T 3c4z_A 259 DLCLVMTIMNGGDIRYHIYNVDED------NPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVR 329 (543)
T ss_dssp EEEEEECCCTTCBHHHHHHTSSTT------SCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEE
T ss_pred EEEEEEEeccCCCHHHHHHHhhcc------cccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEE
Confidence 799999999999999998754321 11689999999999999999999998 999999999999999999999
Q ss_pred EcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHHh
Q 045798 840 IGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFARM 919 (1008)
Q Consensus 840 L~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~~ 919 (1008)
|+|||+++........ .....||+.|+|||++.+..++.++|||||||++|||++|+.||....+.... ......
T Consensus 330 L~DFGla~~~~~~~~~----~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~-~~~~~~ 404 (543)
T 3c4z_A 330 ISDLGLAVELKAGQTK----TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVEN-KELKQR 404 (543)
T ss_dssp ECCCTTCEECCTTCCC----BCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCH-HHHHHH
T ss_pred EeecceeeeccCCCcc----cccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhH-HHHHHH
Confidence 9999999865443221 22346999999999999999999999999999999999999999753221111 111100
Q ss_pred hCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCH
Q 045798 920 ALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNM 981 (1008)
Q Consensus 920 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~ 981 (1008)
+..... .++ ...+..+.+++.+||+.||.+||++
T Consensus 405 --------i~~~~~--------------~~p------~~~s~~~~~li~~lL~~dP~~R~~~ 438 (543)
T 3c4z_A 405 --------VLEQAV--------------TYP------DKFSPASKDFCEALLQKDPEKRLGF 438 (543)
T ss_dssp --------HHHCCC--------------CCC------TTSCHHHHHHHHHHSCSSGGGSCCC
T ss_pred --------Hhhccc--------------CCC------cccCHHHHHHHHHhccCCHhHCCCC
Confidence 000000 000 1234567899999999999999975
No 216
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=4.7e-38 Score=349.97 Aligned_cols=249 Identities=21% Similarity=0.264 Sum_probs=203.2
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccc---cchhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCc
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQ---CEGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGND 759 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 759 (1008)
.++|.+.+.||+|+||.||+|.+..+++.||+|++... .....+.+.+|+.+++.++||||+++++++ .+.+
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~ 114 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFF-----EDND 114 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-----ECSS
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEE-----ecCC
Confidence 46799999999999999999999989999999998643 234557789999999999999999999995 4566
Q ss_pred eEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeE
Q 045798 760 FKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGH 839 (1008)
Q Consensus 760 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 839 (1008)
..++||||+++++|.+++.... .+++.+++.++.||+.||+|||+. +|+||||||+||+++.++.+|
T Consensus 115 ~~~lv~e~~~~~~L~~~~~~~~----------~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~k 181 (335)
T 2owb_A 115 FVFVVLELCRRRSLLELHKRRK----------ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVK 181 (335)
T ss_dssp EEEEEECCCTTCBHHHHHHHHC----------SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEE
T ss_pred eEEEEEecCCCCCHHHHHhccC----------CCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEE
Confidence 7999999999999999886543 689999999999999999999998 999999999999999999999
Q ss_pred EcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHHh
Q 045798 840 IGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFARM 919 (1008)
Q Consensus 840 L~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~~ 919 (1008)
|+|||++......... .....||..|+|||++.+..++.++||||||+++|||++|+.||...... ..+...
T Consensus 182 l~Dfg~~~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~----~~~~~~ 253 (335)
T 2owb_A 182 IGDFGLATKVEYDGER----KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK----ETYLRI 253 (335)
T ss_dssp ECCCTTCEECCSTTCC----BCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH----HHHHHH
T ss_pred EeeccCceecccCccc----ccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHH----HHHHHH
Confidence 9999999865432221 12345899999999999888999999999999999999999998642111 000000
Q ss_pred hCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 920 ALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 920 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
..... .++ ...+..+.+++.+||+.||++|||++|+++
T Consensus 254 ---------~~~~~--------------~~~------~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 291 (335)
T 2owb_A 254 ---------KKNEY--------------SIP------KHINPVAASLIQKMLQTDPTARPTINELLN 291 (335)
T ss_dssp ---------HHTCC--------------CCC------TTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred ---------hcCCC--------------CCC------ccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 00000 000 012345789999999999999999999986
No 217
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=1.2e-37 Score=340.73 Aligned_cols=254 Identities=24% Similarity=0.341 Sum_probs=197.9
Q ss_pred cCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCceEEE
Q 045798 684 NGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDFKAI 763 (1008)
Q Consensus 684 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 763 (1008)
++|.....||+|+||.||+|.+..+++.||+|+++.......+.+.+|+.+++.++||||+++++++ ...+..++
T Consensus 22 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-----~~~~~~~l 96 (295)
T 2clq_A 22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF-----SENGFIKI 96 (295)
T ss_dssp CTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEE-----EETTEEEE
T ss_pred cCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEE-----EeCCcEEE
Confidence 3455666999999999999999889999999999876666678899999999999999999999995 45567899
Q ss_pred EEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecC-CCCeEEcc
Q 045798 764 VYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDN-DLSGHIGD 842 (1008)
Q Consensus 764 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kL~D 842 (1008)
||||+++++|.+++...... ..+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|
T Consensus 97 v~e~~~~~~L~~~l~~~~~~-------~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~D 166 (295)
T 2clq_A 97 FMEQVPGGSLSALLRSKWGP-------LKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISD 166 (295)
T ss_dssp EEECCSEEEHHHHHHHTTCC-------CTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECC
T ss_pred EEEeCCCCCHHHHHHhhccC-------CCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEee
Confidence 99999999999999765321 1567889999999999999999998 9999999999999987 89999999
Q ss_pred cCcccccccccCccccccccccccccccCccccCCCC--CCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHHhh
Q 045798 843 FGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSE--VSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFARMA 920 (1008)
Q Consensus 843 fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~~~ 920 (1008)
||.+......... .....|++.|+|||++.+.. ++.++||||||+++|+|++|+.||.................
T Consensus 167 fg~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~ 242 (295)
T 2clq_A 167 FGTSKRLAGINPC----TETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFK 242 (295)
T ss_dssp TTTCEESCC---------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHC
T ss_pred cccccccCCCCCc----ccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhcccc
Confidence 9999865432211 22345899999999987643 78999999999999999999999864211110000000000
Q ss_pred CCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 921 LPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 921 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
. .+.. ....+.++.+++.+||+.||++|||++|+++
T Consensus 243 ~----------------------------~~~~--~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 243 V----------------------------HPEI--PESMSAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp C----------------------------CCCC--CTTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred c----------------------------cccc--cccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 0 0000 0123456789999999999999999999986
No 218
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=8e-38 Score=352.64 Aligned_cols=280 Identities=21% Similarity=0.223 Sum_probs=203.2
Q ss_pred HHHHHHHhcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccc-----------hhhHHHHHHHHHHhhcCCCCce
Q 045798 676 YKSLLKATNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCE-----------GASKSFMAECKALKNIRHRNLV 744 (1008)
Q Consensus 676 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-----------~~~~~~~~E~~~l~~l~h~niv 744 (1008)
.+++....++|++.+.||+|+||.||+|.+. +++.||||++..... ...+.+.+|++++++++||||+
T Consensus 14 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 92 (362)
T 3pg1_A 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDS-EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92 (362)
T ss_dssp HHHHHHTTCSCEEEEEEEEETTEEEEEEECT-TSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHHHHhccceEEeEEeccCCCEEEEEEECC-CCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence 4677788899999999999999999999986 599999999864321 1236899999999999999999
Q ss_pred eeeeccccccccCCceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceecc
Q 045798 745 KVITSCSSIDFQGNDFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCD 824 (1008)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~D 824 (1008)
++++++...........++||||++ |+|.+++..... .+++..+..++.||+.||+|||+. +|+|||
T Consensus 93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~---------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~D 159 (362)
T 3pg1_A 93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRI---------VISPQHIQYFMYHILLGLHVLHEA---GVVHRD 159 (362)
T ss_dssp CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTS---------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCC
T ss_pred ceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhccc---------CCCHHHHHHHHHHHHHHHHHHHHC---cCEecC
Confidence 9999976544455667899999996 688888875431 689999999999999999999998 999999
Q ss_pred CCCCCeeecCCCCeEEcccCcccccccccCccccccccccccccccCccccCC-CCCCcccchhhHHHHHHHHHhCCCCC
Q 045798 825 LKPSNILLDNDLSGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLG-SEVSTNGDVYSYGILLLEMVTAKKPT 903 (1008)
Q Consensus 825 lkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltG~~pf 903 (1008)
|||+||+++.++.+||+|||.++....... .....||+.|+|||++.+ ..++.++||||+||++|+|++|+.||
T Consensus 160 lkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf 234 (362)
T 3pg1_A 160 LHPGNILLADNNDITICDFNLAREDTADAN-----KTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALF 234 (362)
T ss_dssp CCGGGEEECTTCCEEECCTTC--------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred CChHHEEEcCCCCEEEEecCcccccccccc-----cceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCC
Confidence 999999999999999999999975433222 223458999999999877 67899999999999999999999998
Q ss_pred CccccCCccHHHHHHhhCCcchh-----------hhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccC
Q 045798 904 DVMFEGDLNLHNFARMALPNQVM-----------DIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSM 972 (1008)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~-----------~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 972 (1008)
......+ ............... +.+.......+. ..........+..+.+++.+||+
T Consensus 235 ~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~li~~~L~ 302 (362)
T 3pg1_A 235 RGSTFYN-QLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPA-----------RAWTAVVPTADPVALDLIAKMLE 302 (362)
T ss_dssp CCSSHHH-HHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCC-----------CCHHHHSTTSCHHHHHHHHHHTC
T ss_pred CCCCHHH-HHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCCh-----------hhHHhhCCCCCHHHHHHHHHHhc
Confidence 7432111 111111111111111 111111110000 00000011235568999999999
Q ss_pred cCCCCCCCHHHHHH
Q 045798 973 ESPQDRMNMTNVVH 986 (1008)
Q Consensus 973 ~dP~~RPt~~evl~ 986 (1008)
.||.+|||+.|+++
T Consensus 303 ~dP~~Rpt~~ell~ 316 (362)
T 3pg1_A 303 FNPQRRISTEQALR 316 (362)
T ss_dssp SSGGGSCCHHHHHT
T ss_pred CChhhCCCHHHHHc
Confidence 99999999999986
No 219
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=6e-38 Score=367.64 Aligned_cols=251 Identities=24% Similarity=0.325 Sum_probs=202.9
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEecccc---chhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCc
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQC---EGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGND 759 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 759 (1008)
.++|++.+.||+|+||.||+|.+..+++.||||++.... ....+.+.+|++++++++||||+++++++ ....
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~-----~~~~ 99 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFF-----EDKG 99 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEE-----ECSS
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEE-----EeCC
Confidence 457999999999999999999999899999999986432 34467899999999999999999999994 5567
Q ss_pred eEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeee---cCCC
Q 045798 760 FKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILL---DNDL 836 (1008)
Q Consensus 760 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~ 836 (1008)
..++||||+++|+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+||++ +.++
T Consensus 100 ~~~lv~e~~~~~~L~~~~~~~~----------~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~ 166 (484)
T 3nyv_A 100 YFYLVGEVYTGGELFDEIISRK----------RFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDA 166 (484)
T ss_dssp EEEEEECCCCSCBHHHHHHTCS----------CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTC
T ss_pred EEEEEEecCCCCCHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCC
Confidence 7999999999999999987654 689999999999999999999998 99999999999999 5678
Q ss_pred CeEEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHH
Q 045798 837 SGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNF 916 (1008)
Q Consensus 837 ~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~ 916 (1008)
.+||+|||+++........ ....||+.|+|||++.+ .++.++||||+||++|+|++|+.||......+ .....
T Consensus 167 ~~kl~Dfg~a~~~~~~~~~-----~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i 239 (484)
T 3nyv_A 167 NIRIIDFGLSTHFEASKKM-----KDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYD-ILKKV 239 (484)
T ss_dssp CEEECCTTHHHHBCCCCSH-----HHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHH
T ss_pred cEEEEeeeeeEEccccccc-----ccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHH-HHHHH
Confidence 9999999999866443221 22458999999999876 68999999999999999999999986431110 00011
Q ss_pred HHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 917 ARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 917 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
..... ....+.....+..+.+++.+||+.||.+|||+.|+++
T Consensus 240 ~~~~~----------------------------~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 281 (484)
T 3nyv_A 240 EKGKY----------------------------TFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALD 281 (484)
T ss_dssp HHCCC----------------------------CCCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HcCCC----------------------------CCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence 00000 0001111234556899999999999999999999986
No 220
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=4e-38 Score=349.67 Aligned_cols=272 Identities=23% Similarity=0.343 Sum_probs=205.2
Q ss_pred hcCCCCCceEeeccCeeEEEEE-----EcCCCeEEEEEEeccc-cchhhHHHHHHHHHHhhcCCCCceeeeecccccccc
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGA-----LDEDGIVVAIKVINLQ-CEGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQ 756 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~-----~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 756 (1008)
.++|++.+.||+|+||.||+|. ...+++.||||++... .......+.+|+.++++++||||+++++++ .
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~ 103 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVS-----L 103 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----C
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEE-----c
Confidence 4689999999999999999999 4457789999999744 234556899999999999999999999995 4
Q ss_pred CCceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecC--
Q 045798 757 GNDFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDN-- 834 (1008)
Q Consensus 757 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-- 834 (1008)
..+..++||||+++++|.+++........ ....+++..++.++.||+.||+|||+. +|+||||||+||+++.
T Consensus 104 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~---~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~ 177 (327)
T 2yfx_A 104 QSLPRFILMELMAGGDLKSFLRETRPRPS---QPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPG 177 (327)
T ss_dssp SSSSCEEEEECCTTEEHHHHHHHTSCCSS---STTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSS
T ss_pred CCCCcEEEEecCCCCcHHHHHHhhccccc---ccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCC
Confidence 45668999999999999999986543211 112689999999999999999999998 9999999999999984
Q ss_pred -CCCeEEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHh-CCCCCCccccCCcc
Q 045798 835 -DLSGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVT-AKKPTDVMFEGDLN 912 (1008)
Q Consensus 835 -~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-G~~pf~~~~~~~~~ 912 (1008)
+..+||+|||.+.......... ......+|+.|+|||++.+..++.++||||||+++|||++ |..||...... .
T Consensus 178 ~~~~~kl~Dfg~~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~ 253 (327)
T 2yfx_A 178 PGRVAKIGDFGMARDIYRASYYR--KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ--E 253 (327)
T ss_dssp TTCCEEECCCHHHHHHHC--------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--H
T ss_pred CcceEEECccccccccccccccc--cCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHH--H
Confidence 4569999999997553322111 1223457899999999988889999999999999999998 99998642110 0
Q ss_pred HHHHHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHHHHHHH
Q 045798 913 LHNFARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHELQSVK 992 (1008)
Q Consensus 913 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~i~ 992 (1008)
......... .. . ....++..+.+++.+||+.||.+|||+.|+++.|+.+.
T Consensus 254 ~~~~~~~~~------------~~--------------~----~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~ 303 (327)
T 2yfx_A 254 VLEFVTSGG------------RM--------------D----PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCT 303 (327)
T ss_dssp HHHHHHTTC------------CC--------------C----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHhcCC------------CC--------------C----CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHh
Confidence 001100000 00 0 00123456889999999999999999999999999887
Q ss_pred HHHHHHH
Q 045798 993 NILLELE 999 (1008)
Q Consensus 993 ~~~~~~~ 999 (1008)
.......
T Consensus 304 ~~~~~~~ 310 (327)
T 2yfx_A 304 QDPDVIN 310 (327)
T ss_dssp HCHHHHT
T ss_pred cCHHHhc
Confidence 7654443
No 221
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=1.6e-37 Score=359.01 Aligned_cols=268 Identities=22% Similarity=0.287 Sum_probs=206.8
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCceEE
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 762 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 762 (1008)
.++|++.++||+|+||.||+|.+..+++.||||++..... ...+.+|+++++.+.|++.+..+.++ ....+..+
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~----~~~~~~~~ 79 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWF----GVEGDYNV 79 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEE----EEETTEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEE----EeeCCEEE
Confidence 4689999999999999999999988999999999865432 34588999999999775544444433 24566789
Q ss_pred EEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeee---cCCCCeE
Q 045798 763 IVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILL---DNDLSGH 839 (1008)
Q Consensus 763 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~k 839 (1008)
+||||+ +++|.+++..... .+++..++.|+.||+.||+|||+. +||||||||+|||+ +.++.+|
T Consensus 80 lvme~~-g~sL~~ll~~~~~---------~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vk 146 (483)
T 3sv0_A 80 LVMDLL-GPSLEDLFNFCSR---------KLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVY 146 (483)
T ss_dssp EEEECC-CCBHHHHHHHTTT---------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEE
T ss_pred EEEECC-CCCHHHHHHhhcC---------CCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEE
Confidence 999999 9999999975321 689999999999999999999998 99999999999999 6889999
Q ss_pred EcccCcccccccccCcc---ccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHH
Q 045798 840 IGDFGLARFHQEVSNST---LSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNF 916 (1008)
Q Consensus 840 L~Dfg~a~~~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~ 916 (1008)
|+|||+++......... ........||+.|+|||++.+..++.++|||||||++|||++|+.||......... ..+
T Consensus 147 L~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~-~~~ 225 (483)
T 3sv0_A 147 IIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKK-QKY 225 (483)
T ss_dssp ECCCTTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHH-HHH
T ss_pred EEeCCcceeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHH-HHH
Confidence 99999998765543221 11223456999999999999999999999999999999999999999753221110 000
Q ss_pred HHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHHHHHHHHH
Q 045798 917 ARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHELQSVKNI 994 (1008)
Q Consensus 917 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~i~~~ 994 (1008)
. .+....+....+ .....++.++.+++..||+.||++||++++|++.|+.+...
T Consensus 226 ~---------~i~~~~~~~~~~---------------~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~ 279 (483)
T 3sv0_A 226 E---------KISEKKVATSIE---------------ALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIR 279 (483)
T ss_dssp H---------HHHHHHHHSCHH---------------HHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred H---------HHhhccccccHH---------------HHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHH
Confidence 0 000000000000 00012356789999999999999999999999999988654
No 222
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=5e-38 Score=356.33 Aligned_cols=251 Identities=24% Similarity=0.344 Sum_probs=192.3
Q ss_pred cCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEecccc--chhhHHHHHHHHHHhhcC--CCCceeeeeccccccccCCc
Q 045798 684 NGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQC--EGASKSFMAECKALKNIR--HRNLVKVITSCSSIDFQGND 759 (1008)
Q Consensus 684 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~~~~ 759 (1008)
++|++.+.||+|+||.||+|.+. +++.||||++.... ....+.+.+|+++++++. ||||+++++++ ..++
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~-----~~~~ 129 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE-----ITDQ 129 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEE-----ECSS
T ss_pred CceEEEEEEccCCCeEEEEEEcC-CCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEE-----ecCC
Confidence 45999999999999999999986 58999999997542 344578999999999996 59999999985 4556
Q ss_pred eEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeE
Q 045798 760 FKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGH 839 (1008)
Q Consensus 760 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 839 (1008)
..++||| +.+++|.+++.... .+++.+++.++.||+.||+|||+. +|+||||||+|||++ ++.+|
T Consensus 130 ~~~lv~E-~~~~~L~~~l~~~~----------~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~k 194 (390)
T 2zmd_A 130 YIYMVME-CGNIDLNSWLKKKK----------SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLK 194 (390)
T ss_dssp EEEEEEE-CCSEEHHHHHHHCS----------SCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEE
T ss_pred EEEEEEe-cCCCCHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEE
Confidence 6999999 55889999997654 688899999999999999999998 999999999999995 57999
Q ss_pred EcccCcccccccccCccccccccccccccccCccccCC-----------CCCCcccchhhHHHHHHHHHhCCCCCCcccc
Q 045798 840 IGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLG-----------SEVSTNGDVYSYGILLLEMVTAKKPTDVMFE 908 (1008)
Q Consensus 840 L~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~sDvwslG~vl~elltG~~pf~~~~~ 908 (1008)
|+|||+++......... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.....
T Consensus 195 l~DFG~a~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~ 272 (390)
T 2zmd_A 195 LIDFGIANQMQPDTTSV--VKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN 272 (390)
T ss_dssp ECCCSSSCCC-----------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCC
T ss_pred EEecCccccccCCCccc--cCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhH
Confidence 99999998765432211 1223569999999999765 3688999999999999999999999864321
Q ss_pred CCccHHHHHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHH
Q 045798 909 GDLNLHNFARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHE 987 (1008)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 987 (1008)
... .. ..++++..... ++. ..+.++.+++.+||+.||.+|||+.|+++.
T Consensus 273 ~~~---~~---------~~~~~~~~~~~------------~~~------~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 273 QIS---KL---------HAIIDPNHEIE------------FPD------IPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp HHH---HH---------HHHHCTTSCCC------------CCC------CSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHH---HH---------HHHhCccccCC------------CCc------cchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 111 11 11111110000 000 113457899999999999999999999863
No 223
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=1.1e-37 Score=365.66 Aligned_cols=251 Identities=22% Similarity=0.282 Sum_probs=197.2
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEecccc--chhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCce
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQC--EGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDF 760 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 760 (1008)
.++|++.+.||+|+||+||+|++..+++.||+|+++... ......+.+|+.+++.++||||++++++| .....
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~-----~~~~~ 110 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFF-----EDKRN 110 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEE-----ECSSE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEE-----EeCCE
Confidence 456999999999999999999999899999999997542 33457799999999999999999999995 55677
Q ss_pred EEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecC---CCC
Q 045798 761 KAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDN---DLS 837 (1008)
Q Consensus 761 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~ 837 (1008)
.++||||+++|+|.+++.... .+++..++.++.||+.||+|||+. +|+||||||+||+++. ++.
T Consensus 111 ~~lv~e~~~~g~L~~~~~~~~----------~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~ 177 (494)
T 3lij_A 111 YYLVMECYKGGELFDEIIHRM----------KFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDAL 177 (494)
T ss_dssp EEEEEECCCSCBHHHHHHHHS----------SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCC
T ss_pred EEEEEecCCCCcHHHHHHHcC----------CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCc
Confidence 999999999999999886543 689999999999999999999998 9999999999999976 455
Q ss_pred eEEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHH
Q 045798 838 GHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFA 917 (1008)
Q Consensus 838 ~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~ 917 (1008)
+||+|||+|........ .....||+.|+|||++. ..++.++||||+||++|+|++|..||......+ ......
T Consensus 178 ~kl~DfG~a~~~~~~~~-----~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i~ 250 (494)
T 3lij_A 178 IKIVDFGLSAVFENQKK-----MKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQE-ILRKVE 250 (494)
T ss_dssp EEECCCTTCEECBTTBC-----BCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHH
T ss_pred EEEEECCCCeECCCCcc-----ccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHH
Confidence 99999999986654322 22346999999999976 469999999999999999999999986432110 000110
Q ss_pred HhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 918 RMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 918 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
..... ...+.....+..+.+++.+||+.||.+|||+.|+++
T Consensus 251 ~~~~~----------------------------~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 291 (494)
T 3lij_A 251 KGKYT----------------------------FDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALE 291 (494)
T ss_dssp HTCCC----------------------------CCSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hCCCC----------------------------CCchhcccCCHHHHHHHHHHCCCChhhCccHHHHhc
Confidence 00000 000011123456789999999999999999999986
No 224
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=8.9e-38 Score=352.35 Aligned_cols=258 Identities=16% Similarity=0.129 Sum_probs=201.8
Q ss_pred HhcCCCCCceEeeccCeeEEEEE-----EcCCCeEEEEEEeccccchhhHHHHHHHHHHhhcC---CCCceeeeeccccc
Q 045798 682 ATNGFSSTHLIGVGSFGCVYKGA-----LDEDGIVVAIKVINLQCEGASKSFMAECKALKNIR---HRNLVKVITSCSSI 753 (1008)
Q Consensus 682 ~~~~y~~~~~lg~G~~g~Vy~~~-----~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~ 753 (1008)
..++|.+.+.||+|+||.||+|. ...+++.||||+++.. ....+.+|++++++++ |+||+++++++
T Consensus 63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~--- 136 (365)
T 3e7e_A 63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAH--- 136 (365)
T ss_dssp SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEE---
T ss_pred CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheee---
Confidence 45789999999999999999994 5568899999999744 3456788888888886 99999999995
Q ss_pred cccCCceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeec
Q 045798 754 DFQGNDFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLD 833 (1008)
Q Consensus 754 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~ 833 (1008)
..++..++||||+++|+|.+++....... ...+++..++.|+.||+.||+|||+. +||||||||+|||++
T Consensus 137 --~~~~~~~lv~e~~~~g~L~~~l~~~~~~~-----~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~ 206 (365)
T 3e7e_A 137 --LFQNGSVLVGELYSYGTLLNAINLYKNTP-----EKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILG 206 (365)
T ss_dssp --ECSSCEEEEECCCCSCBHHHHHHHHHTST-----TCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEEC
T ss_pred --ecCCCcEEEEeccCCCcHHHHHHHhhccc-----ccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEec
Confidence 45567899999999999999997432110 11699999999999999999999997 999999999999999
Q ss_pred C-----------CCCeEEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCC
Q 045798 834 N-----------DLSGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKP 902 (1008)
Q Consensus 834 ~-----------~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~p 902 (1008)
. ++.+||+|||+|+......... ......||+.|+|||++.+..++.++|||||||++|||++|+.|
T Consensus 207 ~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~p 284 (365)
T 3e7e_A 207 NGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGT--IFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYM 284 (365)
T ss_dssp GGGTCC------CTTEEECCCTTCEEGGGSCTTE--EECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCC
T ss_pred ccccCccccccccCCEEEeeCchhhhhhccCCCc--eeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCc
Confidence 8 8999999999997554322211 22345699999999999999999999999999999999999999
Q ss_pred CCccccCCccHHHHHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCC-CCH
Q 045798 903 TDVMFEGDLNLHNFARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDR-MNM 981 (1008)
Q Consensus 903 f~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R-Pt~ 981 (1008)
|......... ....+... .....+.+++..|++.+|.+| |++
T Consensus 285 f~~~~~~~~~----------------~~~~~~~~---------------------~~~~~~~~~~~~~l~~~p~~r~~~~ 327 (365)
T 3e7e_A 285 KVKNEGGECK----------------PEGLFRRL---------------------PHLDMWNEFFHVMLNIPDCHHLPSL 327 (365)
T ss_dssp CEEEETTEEE----------------ECSCCTTC---------------------SSHHHHHHHHHHHHCCCCTTCCCCH
T ss_pred cccCCCCcee----------------echhcccc---------------------CcHHHHHHHHHHHcCCCCCCcchHH
Confidence 8643221100 00000000 013346788999999999998 678
Q ss_pred HHHHHHHHHHHHH
Q 045798 982 TNVVHELQSVKNI 994 (1008)
Q Consensus 982 ~evl~~L~~i~~~ 994 (1008)
+++.+.|+++...
T Consensus 328 ~~l~~~l~~~l~~ 340 (365)
T 3e7e_A 328 DLLRQKLKKVFQQ 340 (365)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 8888888877554
No 225
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=1.9e-37 Score=340.45 Aligned_cols=250 Identities=26% Similarity=0.344 Sum_probs=204.2
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEecccc-chhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCceE
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQC-EGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDFK 761 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 761 (1008)
.+.|++.+.||+|+||.||+|.+..+++.||+|+++... ....+.+.+|+.++++++||||+++++++ ..+...
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~ 95 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY-----LKDTKL 95 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEE-----EETTEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEE-----ecCCeE
Confidence 457999999999999999999998899999999997543 34567899999999999999999999985 445678
Q ss_pred EEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeEEc
Q 045798 762 AIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGHIG 841 (1008)
Q Consensus 762 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 841 (1008)
++||||+++++|.+++... ++++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 96 ~lv~e~~~~~~L~~~~~~~-----------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~ 161 (303)
T 3a7i_A 96 WIIMEYLGGGSALDLLEPG-----------PLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLA 161 (303)
T ss_dssp EEEEECCTTEEHHHHHTTS-----------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEEC
T ss_pred EEEEEeCCCCcHHHHHhcC-----------CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEe
Confidence 9999999999999998643 689999999999999999999998 99999999999999999999999
Q ss_pred ccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHHhhC
Q 045798 842 DFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFARMAL 921 (1008)
Q Consensus 842 Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~~~~ 921 (1008)
|||.+......... .....||+.|+|||++.+..++.++||||||+++|+|++|+.||....... .........
T Consensus 162 Dfg~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~~~ 235 (303)
T 3a7i_A 162 DFGVAGQLTDTQIK----RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMK--VLFLIPKNN 235 (303)
T ss_dssp CCTTCEECBTTBCC----BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHHHHHHSC
T ss_pred ecccceecCccccc----cCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHH--HHHHhhcCC
Confidence 99999865443211 223458999999999999999999999999999999999999986431110 000000000
Q ss_pred CcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHH
Q 045798 922 PNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHE 987 (1008)
Q Consensus 922 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 987 (1008)
+ +.+ ....+..+.+++.+||+.||.+|||+.|+++.
T Consensus 236 ~--------~~~----------------------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 271 (303)
T 3a7i_A 236 P--------PTL----------------------EGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 271 (303)
T ss_dssp C--------CCC----------------------CSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred C--------CCC----------------------ccccCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 0 000 01134457899999999999999999999874
No 226
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.5e-37 Score=372.05 Aligned_cols=259 Identities=23% Similarity=0.368 Sum_probs=200.3
Q ss_pred CCCCCc-eEeeccCeeEEEEEEc--CCCeEEEEEEecccc-chhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCce
Q 045798 685 GFSSTH-LIGVGSFGCVYKGALD--EDGIVVAIKVINLQC-EGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDF 760 (1008)
Q Consensus 685 ~y~~~~-~lg~G~~g~Vy~~~~~--~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 760 (1008)
++.+.+ .||+|+||.||+|.+. .++..||||+++... ....+.+.+|++++++++||||++++++|.. +.
T Consensus 336 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~------~~ 409 (613)
T 2ozo_A 336 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA------EA 409 (613)
T ss_dssp SEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES------SS
T ss_pred ceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc------CC
Confidence 334444 7999999999999875 356789999998643 3456789999999999999999999999642 34
Q ss_pred EEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeEE
Q 045798 761 KAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGHI 840 (1008)
Q Consensus 761 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 840 (1008)
.++||||+++|+|.+++..... .+++..++.++.||+.||+|||+. +|+||||||+|||++.++.+||
T Consensus 410 ~~lv~E~~~~g~L~~~l~~~~~---------~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL 477 (613)
T 2ozo_A 410 LMLVMEMAGGGPLHKFLVGKRE---------EIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKI 477 (613)
T ss_dssp EEEEEECCTTCBHHHHHTTCTT---------TSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEE
T ss_pred eEEEEEeCCCCcHHHHHhhccC---------CCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEE
Confidence 8999999999999999975431 689999999999999999999998 9999999999999999999999
Q ss_pred cccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHh-CCCCCCccccCCccHHHHHHh
Q 045798 841 GDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVT-AKKPTDVMFEGDLNLHNFARM 919 (1008)
Q Consensus 841 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-G~~pf~~~~~~~~~~~~~~~~ 919 (1008)
+|||+++......... .......+++.|+|||++.+..++.++|||||||++|||++ |+.||...... .......
T Consensus 478 ~DFGla~~~~~~~~~~-~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~--~~~~~i~- 553 (613)
T 2ozo_A 478 SDFGLSKALGADDSYY-TARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--EVMAFIE- 553 (613)
T ss_dssp CCCSTTTTCC---------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSH--HHHHHHH-
T ss_pred eeccCcccccCCCcee-eeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHH--HHHHHHH-
Confidence 9999998764432211 11222336789999999988899999999999999999998 99998643211 0111100
Q ss_pred hCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHHHHHHHHH
Q 045798 920 ALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHELQSVKNI 994 (1008)
Q Consensus 920 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~i~~~ 994 (1008)
.. .++. ....++.++.++|.+||+.||++||++.+|++.|+.+...
T Consensus 554 -----------~~--------------~~~~----~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~ 599 (613)
T 2ozo_A 554 -----------QG--------------KRME----CPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS 599 (613)
T ss_dssp -----------TT--------------CCCC----CCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred -----------cC--------------CCCC----CCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence 00 0000 0113456789999999999999999999999999987554
No 227
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=2.9e-38 Score=342.48 Aligned_cols=258 Identities=23% Similarity=0.321 Sum_probs=202.6
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEecccc--chhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCce
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQC--EGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDF 760 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 760 (1008)
.++|++.+.||+|+||.||+|.+..+++.||+|++.... ....+.+.+|++++++++||||+++++++.. ..+..
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---~~~~~ 81 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIID---RTNTT 81 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE---GGGTE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEec---CCCce
Confidence 468999999999999999999999899999999997542 3445679999999999999999999998542 34567
Q ss_pred EEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCC-----ceeccCCCCCeeecCC
Q 045798 761 KAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEP-----ILHCDLKPSNILLDND 835 (1008)
Q Consensus 761 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~-----ivH~Dlkp~NIll~~~ 835 (1008)
.++||||+++++|.+++...... ...+++..++.++.|++.||+|||+. + |+||||||+||+++.+
T Consensus 82 ~~lv~e~~~~~~L~~~l~~~~~~------~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~ 152 (279)
T 2w5a_A 82 LYIVMEYCEGGDLASVITKGTKE------RQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGK 152 (279)
T ss_dssp EEEEEECCTTEEHHHHHHHHHHT------TCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSS
T ss_pred EEEEEeCCCCCCHHHHHHhhccc------CCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCC
Confidence 89999999999999999754211 11589999999999999999999997 7 9999999999999999
Q ss_pred CCeEEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHH
Q 045798 836 LSGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHN 915 (1008)
Q Consensus 836 ~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~ 915 (1008)
+.+||+|||.++........ .....|++.|+|||++.+..++.++||||||+++|+|++|+.||...... ....
T Consensus 153 ~~~kl~dfg~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~ 226 (279)
T 2w5a_A 153 QNVKLGDFGLARILNHDTSF----AKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK--ELAG 226 (279)
T ss_dssp SCEEECCCCHHHHC---CHH----HHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHH
T ss_pred CCEEEecCchheeecccccc----ccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHH--HHHH
Confidence 99999999999865433211 11235899999999999889999999999999999999999998643110 0000
Q ss_pred HHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHHH
Q 045798 916 FARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHEL 988 (1008)
Q Consensus 916 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L 988 (1008)
...... .. .+ ....+.++.+++.+||+.||++|||++||++.+
T Consensus 227 ~i~~~~-----------~~-------------~~------~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~ 269 (279)
T 2w5a_A 227 KIREGK-----------FR-------------RI------PYRYSDELNEIITRMLNLKDYHRPSVEEILENP 269 (279)
T ss_dssp HHHHTC-----------CC-------------CC------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTST
T ss_pred HHhhcc-----------cc-------------cC------CcccCHHHHHHHHHHcCCCcccCCCHHHHHhCh
Confidence 000000 00 00 012345689999999999999999999999764
No 228
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=5.4e-38 Score=348.62 Aligned_cols=266 Identities=27% Similarity=0.431 Sum_probs=204.1
Q ss_pred cCCCCCceEeeccCeeEEEEEEcCCCeEE--EEEEeccc-cchhhHHHHHHHHHHhhc-CCCCceeeeeccccccccCCc
Q 045798 684 NGFSSTHLIGVGSFGCVYKGALDEDGIVV--AIKVINLQ-CEGASKSFMAECKALKNI-RHRNLVKVITSCSSIDFQGND 759 (1008)
Q Consensus 684 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~v--avK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~ 759 (1008)
++|++.+.||+|+||.||+|++..++..+ |+|+++.. .....+.+.+|+++++++ +||||+++++++ ...+
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~-----~~~~ 99 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGAC-----EHRG 99 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEE-----EETT
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceee-----eeCC
Confidence 57999999999999999999998888755 99988743 234456799999999999 999999999995 4566
Q ss_pred eEEEEEeccCCCChhcccccCCCCCCC------cccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeec
Q 045798 760 FKAIVYEYMPNGSLEKWLHPHAVPKRD------KEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLD 833 (1008)
Q Consensus 760 ~~~lv~e~~~~gsL~~~l~~~~~~~~~------~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~ 833 (1008)
..++||||+++|+|.+++......... ......+++.+++.++.||+.||+|||+. +|+||||||+||+++
T Consensus 100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~ 176 (327)
T 1fvr_A 100 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVG 176 (327)
T ss_dssp EEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC
T ss_pred ceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEc
Confidence 799999999999999999765310000 00012689999999999999999999998 999999999999999
Q ss_pred CCCCeEEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHh-CCCCCCccccCCcc
Q 045798 834 NDLSGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVT-AKKPTDVMFEGDLN 912 (1008)
Q Consensus 834 ~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-G~~pf~~~~~~~~~ 912 (1008)
.++.+||+|||+++....... .....+++.|+|||++.+..++.++|||||||++|||++ |+.||......
T Consensus 177 ~~~~~kL~Dfg~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~--- 248 (327)
T 1fvr_A 177 ENYVAKIADFGLSRGQEVYVK-----KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA--- 248 (327)
T ss_dssp GGGCEEECCTTCEESSCEECC-----C----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHH---
T ss_pred CCCeEEEcccCcCcccccccc-----ccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHH---
Confidence 999999999999974332211 122347889999999988889999999999999999998 99998643110
Q ss_pred HHHHHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHHHHHHH
Q 045798 913 LHNFARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHELQSVK 992 (1008)
Q Consensus 913 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~i~ 992 (1008)
..... +..... .. ....++..+.+++.+||+.||.+|||++|+++.|+++.
T Consensus 249 --~~~~~---------~~~~~~--------------~~----~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 299 (327)
T 1fvr_A 249 --ELYEK---------LPQGYR--------------LE----KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 299 (327)
T ss_dssp --HHHHH---------GGGTCC--------------CC----CCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --HHHHH---------hhcCCC--------------CC----CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 01000 000000 00 00123456899999999999999999999999999876
Q ss_pred HH
Q 045798 993 NI 994 (1008)
Q Consensus 993 ~~ 994 (1008)
+.
T Consensus 300 ~~ 301 (327)
T 1fvr_A 300 EE 301 (327)
T ss_dssp HS
T ss_pred Hh
Confidence 64
No 229
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=1.2e-37 Score=350.21 Aligned_cols=286 Identities=21% Similarity=0.219 Sum_probs=205.7
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEecccc-chhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCceE
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQC-EGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDFK 761 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 761 (1008)
.++|++.+.||+|+||.||+|.+..+|+.||||+++... ......+.+|++++++++||||+++++++....+......
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 568999999999999999999998899999999997433 3345678899999999999999999999776555666789
Q ss_pred EEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeEEc
Q 045798 762 AIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGHIG 841 (1008)
Q Consensus 762 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 841 (1008)
++||||++ ++|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 90 ~lv~e~~~-~~L~~~~~~~-----------~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~ 154 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVISTQ-----------MLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVC 154 (353)
T ss_dssp EEEECCCS-EEHHHHHHHC-----------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEEC
T ss_pred EEEEeccC-ccHHHHHhhc-----------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEE
Confidence 99999995 6999988653 689999999999999999999998 99999999999999999999999
Q ss_pred ccCcccccccccCccc------cccccccccccccCccccCC-CCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHH
Q 045798 842 DFGLARFHQEVSNSTL------SSSVGVKGTIGYTAPEYGLG-SEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLH 914 (1008)
Q Consensus 842 Dfg~a~~~~~~~~~~~------~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~ 914 (1008)
|||+++.......... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+. ..
T Consensus 155 Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~ 233 (353)
T 2b9h_A 155 DFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQ-LL 233 (353)
T ss_dssp CCTTCEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HH
T ss_pred ecccccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHH-HH
Confidence 9999986654322111 11223468999999998654 6789999999999999999999999874321111 11
Q ss_pred HHHHhhCCcchhhhhcccccCchHHhhhhhhhhhcccc--chhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 915 NFARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTG--INSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 915 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
................. . ...............+.. .......+.++.+++.+||+.||++|||++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (353)
T 2b9h_A 234 LIFGIIGTPHSDNDLRC-I-ESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305 (353)
T ss_dssp HHHHHHCCCCSTTTTTT-C-CCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHhCCCchhccccc-c-ccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 11111000000000000 0 000000000000000000 0001134567899999999999999999999986
No 230
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1e-37 Score=348.94 Aligned_cols=280 Identities=22% Similarity=0.278 Sum_probs=196.5
Q ss_pred HHHhcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccc-----hhhHHHHHHHHHHhhcCCCCceeeeecccccc
Q 045798 680 LKATNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCE-----GASKSFMAECKALKNIRHRNLVKVITSCSSID 754 (1008)
Q Consensus 680 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 754 (1008)
....++|++.+.||+|+||.||+|.+..+|+.||||+++.... ...+.+.+|++++++++||||+++++++
T Consensus 6 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~---- 81 (346)
T 1ua2_A 6 KSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAF---- 81 (346)
T ss_dssp -------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEE----
T ss_pred HHHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEE----
Confidence 3446789999999999999999999988899999999974322 1235788999999999999999999995
Q ss_pred ccCCceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecC
Q 045798 755 FQGNDFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDN 834 (1008)
Q Consensus 755 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~ 834 (1008)
...+..++||||+++ +|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+||+++.
T Consensus 82 -~~~~~~~lv~e~~~~-~l~~~~~~~~~---------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~ 147 (346)
T 1ua2_A 82 -GHKSNISLVFDFMET-DLEVIIKDNSL---------VLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDE 147 (346)
T ss_dssp -CCTTCCEEEEECCSE-EHHHHHTTCCS---------SCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECT
T ss_pred -eeCCceEEEEEcCCC-CHHHHHHhcCc---------CCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcC
Confidence 456678999999965 89888875431 578889999999999999999998 9999999999999999
Q ss_pred CCCeEEcccCcccccccccCccccccccccccccccCccccCCC-CCCcccchhhHHHHHHHHHhCCCCCCccccCCccH
Q 045798 835 DLSGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGS-EVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNL 913 (1008)
Q Consensus 835 ~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~ 913 (1008)
++.+||+|||+++........ .....||+.|+|||++.+. .++.++|||||||++|||++|.+||......+ ..
T Consensus 148 ~~~~kl~Dfg~a~~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~-~~ 222 (346)
T 1ua2_A 148 NGVLKLADFGLAKSFGSPNRA----YTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLD-QL 222 (346)
T ss_dssp TCCEEECCCGGGSTTTSCCCC----CCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HH
T ss_pred CCCEEEEecccceeccCCccc----CCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHH-HH
Confidence 999999999999866433221 2234589999999998764 58899999999999999999999986432211 11
Q ss_pred HHHHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 914 HNFARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 914 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
..............+.+. ...++.. ........+ ........+.++.+++.+||+.||++|||++|+++
T Consensus 223 ~~i~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 291 (346)
T 1ua2_A 223 TRIFETLGTPTEEQWPDM--CSLPDYV-TFKSFPGIP-LHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK 291 (346)
T ss_dssp HHHHHHHCCCCTTTSSST--TSSTTCC-CCCCCCCCC-HHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred HHHHHHcCCCChhhhhhh--ccCcccc-cccccCCCC-hHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhc
Confidence 111111111000000000 0000000 000000000 00001123467899999999999999999999986
No 231
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=1.9e-37 Score=343.43 Aligned_cols=252 Identities=22% Similarity=0.232 Sum_probs=196.2
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEecccc--------chhhHHHHHHHHHHhhcCCCCceeeeecccccc
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQC--------EGASKSFMAECKALKNIRHRNLVKVITSCSSID 754 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 754 (1008)
.++|++.+.||+|+||.||+|.+..+++.||||++.... ......+.+|++++++++||||+++++++.
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~--- 85 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD--- 85 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEE---
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEc---
Confidence 467999999999999999999999899999999986432 122345889999999999999999999853
Q ss_pred ccCCceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecC
Q 045798 755 FQGNDFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDN 834 (1008)
Q Consensus 755 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~ 834 (1008)
.+ ..++||||+++++|.+++.... .+++..++.++.||+.||+|||+. +|+||||||+||+++.
T Consensus 86 --~~-~~~lv~e~~~~~~L~~~~~~~~----------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~ 149 (322)
T 2ycf_A 86 --AE-DYYIVLELMEGGELFDKVVGNK----------RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSS 149 (322)
T ss_dssp --SS-SEEEEEECCTTEETHHHHSTTC----------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESS
T ss_pred --CC-ceEEEEecCCCCcHHHHHhccC----------CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEec
Confidence 22 3799999999999999987543 689999999999999999999998 9999999999999987
Q ss_pred CCC---eEEcccCcccccccccCccccccccccccccccCccccC---CCCCCcccchhhHHHHHHHHHhCCCCCCcccc
Q 045798 835 DLS---GHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGL---GSEVSTNGDVYSYGILLLEMVTAKKPTDVMFE 908 (1008)
Q Consensus 835 ~~~---~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslG~vl~elltG~~pf~~~~~ 908 (1008)
++. +||+|||+++....... .....||+.|+|||++. ...++.++|||||||++|+|++|..||.....
T Consensus 150 ~~~~~~~kl~Dfg~~~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~ 224 (322)
T 2ycf_A 150 QEEDCLIKITDFGHSKILGETSL-----MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT 224 (322)
T ss_dssp SSSSCCEEECCCTTCEECCCCHH-----HHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTC
T ss_pred CCCCCeEEEccCccceecccccc-----cccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccch
Confidence 654 99999999986543221 11245899999999863 56789999999999999999999999964322
Q ss_pred CCccHHHHHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 909 GDLNLHNFARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
.............. ..++ .....+..+.+++.+||+.||++|||++|+++
T Consensus 225 ~~~~~~~~~~~~~~------------~~~~----------------~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 225 QVSLKDQITSGKYN------------FIPE----------------VWAEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp SSCHHHHHHHTCCC------------CCHH----------------HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHHHHHHHHhCccc------------cCch----------------hhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 21111111110000 0000 01123456899999999999999999999986
No 232
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=1.8e-37 Score=356.15 Aligned_cols=199 Identities=24% Similarity=0.338 Sum_probs=171.9
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhhc------CCCCceeeeecccccccc
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKNI------RHRNLVKVITSCSSIDFQ 756 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l------~h~niv~~~~~~~~~~~~ 756 (1008)
..+|++.+.||+|+||.||+|.+..+++.||||+++.. ....+.+.+|+++++.+ +|+||+++++++ .
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~-----~ 169 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENF-----T 169 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEE-----E
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeec-----c
Confidence 45799999999999999999999989999999999754 33446778888888887 577999999984 4
Q ss_pred CCceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCC
Q 045798 757 GNDFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDL 836 (1008)
Q Consensus 757 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 836 (1008)
.....++||||+ +++|.+++...... .+++..++.++.||+.||+|||+. +|+||||||+|||++.++
T Consensus 170 ~~~~~~lv~e~~-~~~L~~~l~~~~~~--------~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~ 237 (429)
T 3kvw_A 170 FRNHICMTFELL-SMNLYELIKKNKFQ--------GFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQG 237 (429)
T ss_dssp ETTEEEEEECCC-CCBHHHHHHHTTTC--------CCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTT
T ss_pred cCCeEEEEEecc-CCCHHHHHHhccCC--------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCC
Confidence 567799999999 57999998765422 589999999999999999999998 999999999999999988
Q ss_pred C--eEEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCcc
Q 045798 837 S--GHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVM 906 (1008)
Q Consensus 837 ~--~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~ 906 (1008)
. +||+|||+|+..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 238 ~~~vkL~DFG~a~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~ 302 (429)
T 3kvw_A 238 RSGIKVIDFGSSCYEHQR-------VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE 302 (429)
T ss_dssp SCCEEECCCTTCEETTCC-------CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CcceEEeecccceecCCc-------ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence 7 999999999754322 12345899999999999999999999999999999999999998754
No 233
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=1.9e-37 Score=364.63 Aligned_cols=251 Identities=22% Similarity=0.277 Sum_probs=199.3
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccc-------------hhhHHHHHHHHHHhhcCCCCceeeeec
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCE-------------GASKSFMAECKALKNIRHRNLVKVITS 749 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-------------~~~~~~~~E~~~l~~l~h~niv~~~~~ 749 (1008)
.++|++.+.||+|+||+||+|.+..+++.||+|+++.... ...+.+.+|++++++++||||++++++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 5789999999999999999999998999999999974321 234678999999999999999999999
Q ss_pred cccccccCCceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCC
Q 045798 750 CSSIDFQGNDFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSN 829 (1008)
Q Consensus 750 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~N 829 (1008)
+ .++...++|||||++|+|.+++.... .+++..++.++.||+.||+|||+. +|+||||||+|
T Consensus 115 ~-----~~~~~~~lv~e~~~gg~L~~~l~~~~----------~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~N 176 (504)
T 3q5i_A 115 F-----EDKKYFYLVTEFYEGGELFEQIINRH----------KFDECDAANIMKQILSGICYLHKH---NIVHRDIKPEN 176 (504)
T ss_dssp E-----ECSSEEEEEEECCTTCBHHHHHHHHS----------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGG
T ss_pred E-----EcCCEEEEEEecCCCCcHHHHHHHcC----------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHH
Confidence 4 56677999999999999999986543 689999999999999999999998 99999999999
Q ss_pred eeecCCC---CeEEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCcc
Q 045798 830 ILLDNDL---SGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVM 906 (1008)
Q Consensus 830 Ill~~~~---~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~ 906 (1008)
|+++.++ .+||+|||++........ .....||+.|+|||++. ..++.++||||+||++|+|++|..||...
T Consensus 177 il~~~~~~~~~~kl~Dfg~a~~~~~~~~-----~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~ 250 (504)
T 3q5i_A 177 ILLENKNSLLNIKIVDFGLSSFFSKDYK-----LRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQ 250 (504)
T ss_dssp EEESSTTCCSSEEECCCTTCEECCTTSC-----BCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred EEEecCCCCccEEEEECCCCEEcCCCCc-----cccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCC
Confidence 9998775 699999999986654322 22345999999999976 46899999999999999999999998643
Q ss_pred ccCCccHHHHHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 907 FEGDLNLHNFARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
...+ ....... ..... ..+.....+.++.+++.+||+.||.+|||++|+++
T Consensus 251 ~~~~-~~~~i~~------------~~~~~----------------~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~ 301 (504)
T 3q5i_A 251 NDQD-IIKKVEK------------GKYYF----------------DFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALN 301 (504)
T ss_dssp SHHH-HHHHHHH------------CCCCC----------------CHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CHHH-HHHHHHc------------CCCCC----------------CccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 2110 0000000 00000 00011124556899999999999999999999975
No 234
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=1.1e-37 Score=337.28 Aligned_cols=248 Identities=25% Similarity=0.356 Sum_probs=194.0
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEecccc---chhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCc
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQC---EGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGND 759 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 759 (1008)
.++|++.+.||+|+||.||+|.+..+++.||||++.... ....+.+.+|+++++.++||||+++++++ ..++
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~ 84 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVI-----STPT 84 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEE-----ECSS
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEE-----ecCC
Confidence 468999999999999999999998899999999996432 23346789999999999999999999994 4566
Q ss_pred eEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeE
Q 045798 760 FKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGH 839 (1008)
Q Consensus 760 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 839 (1008)
..++||||+++++|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+|
T Consensus 85 ~~~lv~e~~~~~~L~~~l~~~~----------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~ 151 (276)
T 2h6d_A 85 DFFMVMEYVSGGELFDYICKHG----------RVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAK 151 (276)
T ss_dssp EEEEEEECCCSCBHHHHHHHHC----------SCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEE
T ss_pred eEEEEEeccCCCcHHHHHhccC----------CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEE
Confidence 7999999999999999997543 689999999999999999999998 999999999999999999999
Q ss_pred EcccCcccccccccCccccccccccccccccCccccCCCCC-CcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHH
Q 045798 840 IGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEV-STNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFAR 918 (1008)
Q Consensus 840 L~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~ 918 (1008)
|+|||.+........ .....+++.|+|||.+.+..+ +.++||||||+++|+|++|+.||...... .......
T Consensus 152 l~dfg~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~ 224 (276)
T 2h6d_A 152 IADFGLSNMMSDGEF-----LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVP--TLFKKIR 224 (276)
T ss_dssp ECCCCGGGCCCC------------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHH
T ss_pred EeecccccccCCCcc-----eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHH--HHHHHhh
Confidence 999999986543321 122458999999999988765 68999999999999999999998642110 0000000
Q ss_pred hhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 919 MALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 919 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
... . ..+ ...+..+.+++.+||+.||.+|||++|+++
T Consensus 225 ~~~------------~-------------~~~------~~~~~~l~~li~~~l~~~p~~Rps~~~~l~ 261 (276)
T 2h6d_A 225 GGV------------F-------------YIP------EYLNRSVATLLMHMLQVDPLKRATIKDIRE 261 (276)
T ss_dssp HCC------------C-------------CCC------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred cCc------------c-------------cCc------hhcCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 000 0 000 012345789999999999999999999987
No 235
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.3e-38 Score=349.48 Aligned_cols=267 Identities=22% Similarity=0.301 Sum_probs=201.2
Q ss_pred CCCHHHHHHHhcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhhc-CCCCceeeeeccc
Q 045798 673 KMSYKSLLKATNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKNI-RHRNLVKVITSCS 751 (1008)
Q Consensus 673 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~ 751 (1008)
.+.+.++....++|++.+.||+|+||.||+|.+..+++.||||++... ....+.+.+|+.+++++ +||||+++++++.
T Consensus 13 ~~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 91 (326)
T 2x7f_A 13 EIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVT-GDEEEEIKQEINMLKKYSHHRNIATYYGAFI 91 (326)
T ss_dssp ---CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-SSTTHHHHHHHHHHHHHCCSTTBCCEEEEEE
T ss_pred hccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecC-cccHHHHHHHHHHHHhccCCCCeeeeeeEEe
Confidence 344445555678999999999999999999999889999999999754 33457899999999999 8999999999975
Q ss_pred cccc-cCCceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCe
Q 045798 752 SIDF-QGNDFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNI 830 (1008)
Q Consensus 752 ~~~~-~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NI 830 (1008)
.... ...+..++||||+++|+|.+++..... ..+++..++.++.||+.||+|||+. +|+||||||+||
T Consensus 92 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--------~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NI 160 (326)
T 2x7f_A 92 KKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKG--------NTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNV 160 (326)
T ss_dssp ECC--CCCCEEEEEEECCTTEEHHHHHHHSGG--------GCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGE
T ss_pred eccCccccceEEEEEEcCCCCcHHHHHHhccc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHE
Confidence 4221 114678999999999999999976431 2689999999999999999999998 999999999999
Q ss_pred eecCCCCeEEcccCcccccccccCccccccccccccccccCccccC-----CCCCCcccchhhHHHHHHHHHhCCCCCCc
Q 045798 831 LLDNDLSGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGL-----GSEVSTNGDVYSYGILLLEMVTAKKPTDV 905 (1008)
Q Consensus 831 ll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwslG~vl~elltG~~pf~~ 905 (1008)
+++.++.+||+|||++......... .....||+.|+|||++. +..++.++|||||||++|+|++|+.||..
T Consensus 161 l~~~~~~~kl~Dfg~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 236 (326)
T 2x7f_A 161 LLTENAEVKLVDFGVSAQLDRTVGR----RNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCD 236 (326)
T ss_dssp EECTTCCEEECCCTTTC-----------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTT
T ss_pred EEcCCCCEEEeeCcCceecCcCccc----cccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCC
Confidence 9999999999999999865432211 12345899999999987 56789999999999999999999999864
Q ss_pred cccCCccHHHHHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHH
Q 045798 906 MFEGDLNLHNFARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVV 985 (1008)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl 985 (1008)
..... ..........+ .. .....+..+.+++.+||+.||.+|||++|++
T Consensus 237 ~~~~~-~~~~~~~~~~~---------~~---------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll 285 (326)
T 2x7f_A 237 MHPMR-ALFLIPRNPAP---------RL---------------------KSKKWSKKFQSFIESCLVKNHSQRPATEQLM 285 (326)
T ss_dssp SCHHH-HHHHHHHSCCC---------CC---------------------SCSCSCHHHHHHHHHHCCSSGGGSCCHHHHH
T ss_pred CcHHH-HHHHhhcCccc---------cC---------------------CccccCHHHHHHHHHHhccChhhCCCHHHHh
Confidence 32110 00000000000 00 0011345678999999999999999999998
Q ss_pred H
Q 045798 986 H 986 (1008)
Q Consensus 986 ~ 986 (1008)
+
T Consensus 286 ~ 286 (326)
T 2x7f_A 286 K 286 (326)
T ss_dssp T
T ss_pred h
Confidence 7
No 236
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=7e-38 Score=343.78 Aligned_cols=253 Identities=23% Similarity=0.325 Sum_probs=198.2
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCceEE
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 762 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 762 (1008)
.++|++.+.||+|+||.||+|.+..+++.||+|++........+.+.+|++++++++||||+++++++ ..++..+
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~ 92 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY-----YHDGKLW 92 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEE-----ECC-CEE
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeee-----eeCCeEE
Confidence 56899999999999999999999888999999999876666678899999999999999999999995 4456789
Q ss_pred EEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeEEcc
Q 045798 763 IVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGHIGD 842 (1008)
Q Consensus 763 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 842 (1008)
+||||+++++|.+++..... .+++..++.++.|++.||+|||+. +++||||||+||+++.++.+||+|
T Consensus 93 lv~e~~~~~~l~~~~~~~~~---------~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~D 160 (302)
T 2j7t_A 93 IMIEFCPGGAVDAIMLELDR---------GLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLAD 160 (302)
T ss_dssp EEEECCTTEEHHHHHHHHTS---------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECC
T ss_pred EEEEeCCCCcHHHHHHhhcc---------CCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEE
Confidence 99999999999998865321 689999999999999999999998 999999999999999999999999
Q ss_pred cCcccccccccCccccccccccccccccCcccc-----CCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHH
Q 045798 843 FGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYG-----LGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFA 917 (1008)
Q Consensus 843 fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~-----~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~ 917 (1008)
||++........ ......||+.|+|||++ .+..++.++||||||+++|+|++|+.||....... ......
T Consensus 161 fg~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~ 235 (302)
T 2j7t_A 161 FGVSAKNLKTLQ----KRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR-VLLKIA 235 (302)
T ss_dssp CHHHHHHHHHHH----C-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHH
T ss_pred CCCCcccccccc----ccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHH-HHHHHh
Confidence 999864322111 11234589999999987 46678999999999999999999999986432110 000000
Q ss_pred HhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 918 RMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 918 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
....+ ........+..+.+++.+||+.||++|||+.|+++
T Consensus 236 ~~~~~-----------------------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 236 KSDPP-----------------------------TLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp HSCCC-----------------------------CCSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred ccCCc-----------------------------ccCCccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 00000 00001123456889999999999999999999986
No 237
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=2.7e-37 Score=338.38 Aligned_cols=254 Identities=21% Similarity=0.286 Sum_probs=202.1
Q ss_pred HHhcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEecccc---------chhhHHHHHHHHHHhhcC-CCCceeeeecc
Q 045798 681 KATNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQC---------EGASKSFMAECKALKNIR-HRNLVKVITSC 750 (1008)
Q Consensus 681 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---------~~~~~~~~~E~~~l~~l~-h~niv~~~~~~ 750 (1008)
...++|++.+.||+|+||.||+|.+..+++.||||+++... ....+.+.+|+++++++. ||||+++++++
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 93 (298)
T 1phk_A 14 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY 93 (298)
T ss_dssp -CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred chhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeee
Confidence 34578999999999999999999999899999999997542 122457889999999995 99999999994
Q ss_pred ccccccCCceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCe
Q 045798 751 SSIDFQGNDFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNI 830 (1008)
Q Consensus 751 ~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NI 830 (1008)
..+...++||||+++++|.+++.... .+++..++.++.||+.||+|||+. +|+||||||+||
T Consensus 94 -----~~~~~~~lv~e~~~~~~L~~~l~~~~----------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Ni 155 (298)
T 1phk_A 94 -----ETNTFFFLVFDLMKKGELFDYLTEKV----------TLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENI 155 (298)
T ss_dssp -----ECSSEEEEEEECCTTCBHHHHHHHHS----------SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGE
T ss_pred -----ccCCeEEEEEeccCCCcHHHHHhccC----------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceE
Confidence 55677999999999999999997543 689999999999999999999998 999999999999
Q ss_pred eecCCCCeEEcccCcccccccccCccccccccccccccccCccccC------CCCCCcccchhhHHHHHHHHHhCCCCCC
Q 045798 831 LLDNDLSGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGL------GSEVSTNGDVYSYGILLLEMVTAKKPTD 904 (1008)
Q Consensus 831 ll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~sDvwslG~vl~elltG~~pf~ 904 (1008)
+++.++.+||+|||.+........ .....|++.|+|||++. ...++.++||||||+++|+|++|+.||.
T Consensus 156 l~~~~~~~kl~dfg~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~ 230 (298)
T 1phk_A 156 LLDDDMNIKLTDFGFSCQLDPGEK-----LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFW 230 (298)
T ss_dssp EECTTCCEEECCCTTCEECCTTCC-----BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred EEcCCCcEEEecccchhhcCCCcc-----cccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCc
Confidence 999999999999999986543321 12345899999999874 4568899999999999999999999986
Q ss_pred ccccCCccHHHHHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHH
Q 045798 905 VMFEGDLNLHNFARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNV 984 (1008)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ev 984 (1008)
..... ........... . ...+.....+..+.+++.+||+.||++|||+.|+
T Consensus 231 ~~~~~-~~~~~~~~~~~------------~----------------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l 281 (298)
T 1phk_A 231 HRKQM-LMLRMIMSGNY------------Q----------------FGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEA 281 (298)
T ss_dssp CSSHH-HHHHHHHHTCC------------C----------------CCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHH
T ss_pred CccHH-HHHHHHhcCCc------------c----------------cCcccccccCHHHHHHHHHHccCCcccCCCHHHH
Confidence 42110 00000000000 0 0000111345568999999999999999999999
Q ss_pred HH
Q 045798 985 VH 986 (1008)
Q Consensus 985 l~ 986 (1008)
++
T Consensus 282 l~ 283 (298)
T 1phk_A 282 LA 283 (298)
T ss_dssp TT
T ss_pred Hh
Confidence 75
No 238
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=1.3e-37 Score=373.30 Aligned_cols=253 Identities=23% Similarity=0.346 Sum_probs=197.8
Q ss_pred ceEeeccCeeEEEEEE--cCCCeEEEEEEecccc--chhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCceEEEEE
Q 045798 690 HLIGVGSFGCVYKGAL--DEDGIVVAIKVINLQC--EGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDFKAIVY 765 (1008)
Q Consensus 690 ~~lg~G~~g~Vy~~~~--~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 765 (1008)
+.||+|+||.||+|.+ ..+++.||||+++... ....+.+.+|++++++++||||++++++|. .+..++||
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~------~~~~~lv~ 448 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE------AESWMLVM 448 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEE------SSSEEEEE
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe------cCCEEEEE
Confidence 4799999999999965 4467899999997543 234578999999999999999999999863 23478999
Q ss_pred eccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeEEcccCc
Q 045798 766 EYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGHIGDFGL 845 (1008)
Q Consensus 766 e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~ 845 (1008)
||+++|+|.+++.... .+++..++.|+.||+.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 449 E~~~~g~L~~~l~~~~----------~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGl 515 (635)
T 4fl3_A 449 EMAELGPLNKYLQQNR----------HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGL 515 (635)
T ss_dssp ECCTTEEHHHHHHHCT----------TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTH
T ss_pred EccCCCCHHHHHhhCC----------CCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCC
Confidence 9999999999997553 689999999999999999999998 999999999999999999999999999
Q ss_pred ccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCcc
Q 045798 846 ARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVT-AKKPTDVMFEGDLNLHNFARMALPNQ 924 (1008)
Q Consensus 846 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~ 924 (1008)
|+......... .......+|+.|+|||++.+..++.++|||||||++|||++ |+.||......+ ....
T Consensus 516 a~~~~~~~~~~-~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~--~~~~-------- 584 (635)
T 4fl3_A 516 SKALRADENYY-KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE--VTAM-------- 584 (635)
T ss_dssp HHHTTC--------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--HHHH--------
T ss_pred ccccccCcccc-ccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHH--------
Confidence 98765433221 11223347889999999998899999999999999999998 999986432110 0000
Q ss_pred hhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHHHHHHHHH
Q 045798 925 VMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHELQSVKNI 994 (1008)
Q Consensus 925 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~i~~~ 994 (1008)
+.... ++. ....++.++.+++..||+.||++|||+++|++.|+++...
T Consensus 585 ----i~~~~--------------~~~----~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~ 632 (635)
T 4fl3_A 585 ----LEKGE--------------RMG----CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYD 632 (635)
T ss_dssp ----HHTTC--------------CCC----CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred ----HHcCC--------------CCC----CCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHH
Confidence 00000 000 0112456789999999999999999999999999987543
No 239
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=2e-37 Score=337.80 Aligned_cols=247 Identities=21% Similarity=0.271 Sum_probs=196.6
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccc--cchhhHHHHHHHHHHhhc-CCCCceeeeeccccccccCCc
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQ--CEGASKSFMAECKALKNI-RHRNLVKVITSCSSIDFQGND 759 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~ 759 (1008)
.++|++.+.||+|+||.||+|.+..+++.||+|+++.. .......+.+|+..+.++ +||||+++++++ ..++
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~-----~~~~ 84 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAW-----AEDD 84 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEE-----EETT
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeee-----ecCC
Confidence 46799999999999999999999889999999999753 234456789999999999 999999999995 4566
Q ss_pred eEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCC----
Q 045798 760 FKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDND---- 835 (1008)
Q Consensus 760 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~---- 835 (1008)
..++||||+++++|.+++...... ...+++..++.++.||+.||+|||++ +|+||||||+||+++.+
T Consensus 85 ~~~lv~e~~~~~~L~~~l~~~~~~------~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~ 155 (289)
T 1x8b_A 85 HMLIQNEYCNGGSLADAISENYRI------MSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPN 155 (289)
T ss_dssp EEEEEEECCTTCBHHHHHHHHHHH------TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC------
T ss_pred eEEEEEEecCCCcHHHHHHhhccc------ccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCc
Confidence 799999999999999999754210 01689999999999999999999998 99999999999999844
Q ss_pred ---------------CCeEEcccCcccccccccCccccccccccccccccCccccCCC-CCCcccchhhHHHHHHHHHhC
Q 045798 836 ---------------LSGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGS-EVSTNGDVYSYGILLLEMVTA 899 (1008)
Q Consensus 836 ---------------~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltG 899 (1008)
..+||+|||.+....... ...||+.|+|||++.+. .+++++|||||||++|+|++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~--------~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~ 227 (289)
T 1x8b_A 156 AASEEGDEDDWASNKVMFKIGDLGHVTRISSPQ--------VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGA 227 (289)
T ss_dssp --------------CCCEEECCCTTCEETTCSC--------CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTC
T ss_pred ccccccccccccCCceEEEEcccccccccCCcc--------ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcC
Confidence 479999999998654322 13489999999998776 567899999999999999999
Q ss_pred CCCCCccccCCccHHHHHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCC
Q 045798 900 KKPTDVMFEGDLNLHNFARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRM 979 (1008)
Q Consensus 900 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP 979 (1008)
.+|+... ...........+ ..+ ...+..+.+++.+||+.||++||
T Consensus 228 ~~~~~~~----~~~~~~~~~~~~-------------------------~~~------~~~~~~~~~li~~~l~~dp~~Rp 272 (289)
T 1x8b_A 228 EPLPRNG----DQWHEIRQGRLP-------------------------RIP------QVLSQEFTELLKVMIHPDPERRP 272 (289)
T ss_dssp CCCCSSS----HHHHHHHTTCCC-------------------------CCS------SCCCHHHHHHHHHHTCSSGGGSC
T ss_pred CCCCcch----hHHHHHHcCCCC-------------------------CCC------cccCHHHHHHHHHHhCCCcccCC
Confidence 9875421 111111110000 000 01345678999999999999999
Q ss_pred CHHHHHH
Q 045798 980 NMTNVVH 986 (1008)
Q Consensus 980 t~~evl~ 986 (1008)
|+.|+++
T Consensus 273 s~~~ll~ 279 (289)
T 1x8b_A 273 SAMALVK 279 (289)
T ss_dssp CHHHHHT
T ss_pred CHHHHhh
Confidence 9999976
No 240
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=2.7e-37 Score=342.18 Aligned_cols=285 Identities=23% Similarity=0.251 Sum_probs=199.1
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhhcCCCCceeeeecccccc--------
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKNIRHRNLVKVITSCSSID-------- 754 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-------- 754 (1008)
.++|++.+.||+|+||.||+|.+..+++.||+|++........+.+.+|++++++++||||+++++++....
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 468999999999999999999998889999999998766666788999999999999999999999864321
Q ss_pred -ccCCceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeec
Q 045798 755 -FQGNDFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLD 833 (1008)
Q Consensus 755 -~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~ 833 (1008)
.......++||||++ |+|.+++... ++++..++.++.|++.||+|||++ +|+||||||+||+++
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~~~-----------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~ 154 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLEQG-----------PLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFIN 154 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHTTC-----------CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEE
T ss_pred cccccCceeEEeeccC-CCHHHHhhcC-----------CccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEc
Confidence 245577899999996 6999998643 688999999999999999999998 999999999999997
Q ss_pred -CCCCeEEcccCcccccccccCccccccccccccccccCccccCC-CCCCcccchhhHHHHHHHHHhCCCCCCccccCCc
Q 045798 834 -NDLSGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLG-SEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDL 911 (1008)
Q Consensus 834 -~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~ 911 (1008)
+++.+||+|||.++......... .......+|..|+|||.+.+ ..++.++|||||||++|||++|+.||.......
T Consensus 155 ~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~- 232 (320)
T 2i6l_A 155 TEDLVLKIGDFGLARIMDPHYSHK-GHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELE- 232 (320)
T ss_dssp TTTTEEEECCCTTCBCC---------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-
T ss_pred CCCCeEEEccCccccccCCCcccc-cccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHH-
Confidence 56799999999998664322111 11223457899999998765 678999999999999999999999987432211
Q ss_pred cHHHHHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 912 NLHNFARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
...... ...+..............+..... .......+........+.++.+++.+||+.||++|||++|+++
T Consensus 233 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 233 QMQLIL-ESIPVVHEEDRQELLSVIPVYIRN-DMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp HHHHHH-HHSCCCCHHHHHHHHTTSCHHHHH-HTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred HHHHHH-HhcCCCchhhhhhhhhcCcccccc-cccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 111111 111111000000000000000000 0000000000001134567899999999999999999999986
No 241
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.7e-37 Score=352.23 Aligned_cols=289 Identities=21% Similarity=0.225 Sum_probs=200.8
Q ss_pred HHHhcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhhcCCCCceeeeeccccccc----
Q 045798 680 LKATNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKNIRHRNLVKVITSCSSIDF---- 755 (1008)
Q Consensus 680 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~---- 755 (1008)
....++|++.+.||+|+||.||+|.+..+|+.||||++..... ...+|+++++.++||||+++++++.....
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 78 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK 78 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence 3456789999999999999999999998999999999864422 23479999999999999999998754321
Q ss_pred -----------------------------cCCceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHH
Q 045798 756 -----------------------------QGNDFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVA 806 (1008)
Q Consensus 756 -----------------------------~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~ 806 (1008)
....+.++||||++ |+|.+.+...... ...+++..++.++.||+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~------~~~l~~~~~~~i~~qi~ 151 (383)
T 3eb0_A 79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRS------GRSIPMNLISIYIYQLF 151 (383)
T ss_dssp -------------------------------CCEEEEEECCCS-EEHHHHHHHHHHT------TCCCCHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhc------CCCCCHHHHHHHHHHHH
Confidence 34456889999996 5877776532110 11789999999999999
Q ss_pred HHHHHHhhCCCCCceeccCCCCCeeec-CCCCeEEcccCcccccccccCccccccccccccccccCccccCCC-CCCccc
Q 045798 807 SALDYLHHHCQEPILHCDLKPSNILLD-NDLSGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGS-EVSTNG 884 (1008)
Q Consensus 807 ~~L~~LH~~~~~~ivH~Dlkp~NIll~-~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~s 884 (1008)
.||+|||+. +|+||||||+||+++ .++.+||+|||.|+........ ....+|+.|+|||++.+. .++.++
T Consensus 152 ~aL~~LH~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~ 223 (383)
T 3eb0_A 152 RAVGFIHSL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPS-----VAYICSRFYRAPELMLGATEYTPSI 223 (383)
T ss_dssp HHHHHHHTT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCC-----CCCCCCSSCCCHHHHTTCSSCCTHH
T ss_pred HHHHHHHHC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCC-----cCcccCCCccCHHHhcCCCCCCcch
Confidence 999999997 999999999999997 6889999999999865443221 234589999999998775 489999
Q ss_pred chhhHHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCcchhhhh--cccccCchHHhhhhhhhhhccccchhHHHHHHH
Q 045798 885 DVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFARMALPNQVMDIV--DPILRNDEEILASTDKCRRMQTGINSRLECLIS 962 (1008)
Q Consensus 885 DvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~--d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 962 (1008)
||||+||++|||++|+.||......+ ...........+....+. ++..... .........+... .....+.+
T Consensus 224 DiwslG~il~ell~g~~pf~~~~~~~-~~~~i~~~~g~p~~~~~~~~~~~~~~~---~~~~~~~~~~~~~--~~~~~~~~ 297 (383)
T 3eb0_A 224 DLWSIGCVFGELILGKPLFSGETSID-QLVRIIQIMGTPTKEQMIRMNPHYTEV---RFPTLKAKDWRKI--LPEGTPSL 297 (383)
T ss_dssp HHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCHHHHHHHCTTC--C---CCCCCCCCCHHHH--SCTTCCHH
T ss_pred hhhhHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCCHHHHHHhCcccccc---cCCccCcccHHhh--CCCCCCHH
Confidence 99999999999999999987432211 112222211111111110 0000000 0000000000000 01124556
Q ss_pred HHHHHhcccCcCCCCCCCHHHHHH--HHHHHHH
Q 045798 963 MVKIGVACSMESPQDRMNMTNVVH--ELQSVKN 993 (1008)
Q Consensus 963 l~~li~~cl~~dP~~RPt~~evl~--~L~~i~~ 993 (1008)
+.+++.+||+.||.+|||+.|+++ .++.+++
T Consensus 298 ~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~ 330 (383)
T 3eb0_A 298 AIDLLEQILRYEPDLRINPYEAMAHPFFDHLRN 330 (383)
T ss_dssp HHHHHHHHCCSSGGGSCCHHHHHTSGGGHHHHH
T ss_pred HHHHHHHHccCChhhCCCHHHHhcCHHHHHHHh
Confidence 899999999999999999999985 3444443
No 242
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=5.2e-37 Score=342.92 Aligned_cols=278 Identities=19% Similarity=0.273 Sum_probs=204.2
Q ss_pred hcCCCCCceEeeccCeeEEEEEE-cCCCeEEEEEEeccccchhhHHHHHHHHHHhhcCCC------Cceeeeeccccccc
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGAL-DEDGIVVAIKVINLQCEGASKSFMAECKALKNIRHR------NLVKVITSCSSIDF 755 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~------niv~~~~~~~~~~~ 755 (1008)
.++|++.+.||+|+||.||+|.+ ..+++.||||+++.. ....+.+.+|+++++.++|+ +++++++++
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~----- 86 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWF----- 86 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEE-----
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeeccc-----
Confidence 46899999999999999999998 557899999999754 34457789999999998665 489999984
Q ss_pred cCCceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecC-
Q 045798 756 QGNDFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDN- 834 (1008)
Q Consensus 756 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~- 834 (1008)
...+..++||||+ +++|.+++...... ++++..++.++.||+.||+|||++ +|+||||||+||+++.
T Consensus 87 ~~~~~~~lv~e~~-~~~l~~~l~~~~~~--------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~ 154 (339)
T 1z57_A 87 EHHGHICIVFELL-GLSTYDFIKENGFL--------PFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQS 154 (339)
T ss_dssp EETTEEEEEEECC-CCBHHHHHHHTTTC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCC
T ss_pred ccCCcEEEEEcCC-CCCHHHHHHhcCCC--------CCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEecc
Confidence 4566799999999 89999999765422 688999999999999999999998 9999999999999987
Q ss_pred ------------------CCCeEEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHH
Q 045798 835 ------------------DLSGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEM 896 (1008)
Q Consensus 835 ------------------~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~el 896 (1008)
++.+||+|||.++...... ....||+.|+|||++.+..++.++|||||||++|||
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~-------~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el 227 (339)
T 1z57_A 155 DYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHH-------STLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEY 227 (339)
T ss_dssp CEEEEEC----CEEEEESCCCEEECCCSSCEETTSCC-------CSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHH
T ss_pred ccccccCCccccccccccCCCceEeeCcccccCcccc-------ccccCCccccChHHhhCCCCCcchhhHHHHHHHHHH
Confidence 6689999999998643321 234589999999999999999999999999999999
Q ss_pred HhCCCCCCccccCCccHHHHHHh--hCCcchhhhhcc---------cccCc-hHHhhhhhhhhhccccchhHHHHHHHHH
Q 045798 897 VTAKKPTDVMFEGDLNLHNFARM--ALPNQVMDIVDP---------ILRND-EEILASTDKCRRMQTGINSRLECLISMV 964 (1008)
Q Consensus 897 ltG~~pf~~~~~~~~~~~~~~~~--~~~~~~~~~~d~---------~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 964 (1008)
++|+.||......+ ........ ..+......... ..... .........+............++.++.
T Consensus 228 ~~g~~pf~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 306 (339)
T 1z57_A 228 YLGFTVFPTHDSKE-HLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLF 306 (339)
T ss_dssp HHSSCSCCCSCHHH-HHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHH
T ss_pred HhCCCCCCCCChHH-HHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHH
Confidence 99999997432211 11111111 111111000000 00000 0000000111111111122335677899
Q ss_pred HHHhcccCcCCCCCCCHHHHHH
Q 045798 965 KIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 965 ~li~~cl~~dP~~RPt~~evl~ 986 (1008)
+++.+||+.||.+|||++|+++
T Consensus 307 ~li~~~L~~dP~~Rpt~~ell~ 328 (339)
T 1z57_A 307 DLIQKMLEYDPAKRITLREALK 328 (339)
T ss_dssp HHHHHHTCSSTTTSCCHHHHTT
T ss_pred HHHHHHhCcCcccccCHHHHhc
Confidence 9999999999999999999975
No 243
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=3.4e-37 Score=347.94 Aligned_cols=277 Identities=20% Similarity=0.224 Sum_probs=198.1
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEecccc--chhhHHHHHHHHHHhhcCCCCceeeeeccccccc-cCCc
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQC--EGASKSFMAECKALKNIRHRNLVKVITSCSSIDF-QGND 759 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~~ 759 (1008)
.++|.+.+.||+|+||.||+|.+..+|+.||||++.... ....+.+.+|+.+++.++||||+++++++..... ....
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 468999999999999999999999899999999997532 3345788999999999999999999999654321 1112
Q ss_pred eEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeE
Q 045798 760 FKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGH 839 (1008)
Q Consensus 760 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 839 (1008)
..++||||++ ++|.+++.. .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+|
T Consensus 121 ~~~lv~e~~~-~~l~~~~~~------------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~k 184 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMGM------------EFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELK 184 (371)
T ss_dssp CCEEEEECCC-EEHHHHTTS------------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEE
T ss_pred eEEEEEcccc-ccHHHHhhc------------CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEE
Confidence 3499999995 688887732 589999999999999999999998 999999999999999999999
Q ss_pred EcccCcccccccccCccccccccccccccccCccccCC-CCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHH
Q 045798 840 IGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLG-SEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFAR 918 (1008)
Q Consensus 840 L~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~ 918 (1008)
|+|||.++..... .....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||......+ .......
T Consensus 185 L~Dfg~a~~~~~~-------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~ 256 (371)
T 4exu_A 185 ILDFGLARHADAE-------MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQILK 256 (371)
T ss_dssp ECSTTCC---------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHH
T ss_pred EEecCcccccccC-------cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHH
Confidence 9999999855432 123458999999999887 678999999999999999999999997432111 1111111
Q ss_pred hhCCcchhhhhcccccCchHHhhhhhhhhhccc-cc-hhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 919 MALPNQVMDIVDPILRNDEEILASTDKCRRMQT-GI-NSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 919 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
..... ..++....-. .. ...........+. .. ......+..+.+++.+||+.||++|||++|+++
T Consensus 257 ~~~~~-~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 323 (371)
T 4exu_A 257 VTGVP-GTEFVQKLND-KA-AKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 323 (371)
T ss_dssp HHCCC-CHHHHTTCSC-HH-HHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HhCCC-cHHHHHHhhh-hh-hhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhc
Confidence 11110 0111110000 00 0000000000000 00 001123567899999999999999999999986
No 244
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=3.1e-37 Score=338.06 Aligned_cols=276 Identities=27% Similarity=0.356 Sum_probs=200.5
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEecccc--chhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCce
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQC--EGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDF 760 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 760 (1008)
.++|++.+.||+|+||.||+|++..+++.||||+++... ....+.+.+|++++++++||||+++++++ ..++.
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~ 76 (299)
T 2r3i_A 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVI-----HTENK 76 (299)
T ss_dssp CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEE-----EETTE
T ss_pred cchhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEE-----ecCCc
Confidence 367999999999999999999998899999999987543 23346789999999999999999999995 45667
Q ss_pred EEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeEE
Q 045798 761 KAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGHI 840 (1008)
Q Consensus 761 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 840 (1008)
.++||||++ ++|.+++...... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 77 ~~lv~e~~~-~~L~~~~~~~~~~--------~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl 144 (299)
T 2r3i_A 77 LYLVFEFLH-QDLKKFMDASALT--------GIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKL 144 (299)
T ss_dssp EEEEEECCS-EEHHHHHHHTTTT--------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEE
T ss_pred eEEEEEccc-CCHHHHHHhhhcc--------CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEE
Confidence 999999996 6999998765322 688999999999999999999998 9999999999999999999999
Q ss_pred cccCcccccccccCccccccccccccccccCccccCCCC-CCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHHh
Q 045798 841 GDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSE-VSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFARM 919 (1008)
Q Consensus 841 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~~ 919 (1008)
+|||.+......... .....+|+.|+|||++.+.. ++.++|||||||++|+|++|+.||......+. .......
T Consensus 145 ~dfg~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~-~~~~~~~ 219 (299)
T 2r3i_A 145 ADFGLARAFGVPVRT----YTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ-LFRIFRT 219 (299)
T ss_dssp CSTTHHHHHCCCSBC----TTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHH
T ss_pred CcchhhhhccCCccc----cCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHH-HHHHHHH
Confidence 999999865432211 12345899999999988765 78999999999999999999999875322111 1111111
Q ss_pred h-CCcc-hhhhhcccccCchHHhhhhhhhhhccccc-hhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 920 A-LPNQ-VMDIVDPILRNDEEILASTDKCRRMQTGI-NSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 920 ~-~~~~-~~~~~d~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
. .+.. ...-....-...+ .... ...... ......+.++.+++.+||+.||++|||+.|+++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~----~~~~--~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 220 LGTPDEVVWPGVTSMPDYKP----SFPK--WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp HCCCCTTTSTTGGGSTTCCT----TSCC--CCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hCCCchhhhhHhhcCcccch----hhhc--ccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 1 1100 0000000000000 0000 000000 000123456899999999999999999999986
No 245
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=3.2e-37 Score=340.51 Aligned_cols=252 Identities=25% Similarity=0.327 Sum_probs=197.7
Q ss_pred HhcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCceE
Q 045798 682 ATNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDFK 761 (1008)
Q Consensus 682 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 761 (1008)
..++|++.+.||+|+||.||+|.+..+|+.||+|++... ...+.+.+|++++++++||||+++++++ ...+..
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~ 99 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVE--SDLQEIIKEISIMQQCDSPHVVKYYGSY-----FKNTDL 99 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETT--SCCHHHHHHHHHHHTCCCTTBCCEEEEE-----EETTEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCch--HHHHHHHHHHHHHHhCCCCCCccEEEEE-----EeCCEE
Confidence 456899999999999999999999888999999999754 2346789999999999999999999985 445678
Q ss_pred EEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeEEc
Q 045798 762 AIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGHIG 841 (1008)
Q Consensus 762 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 841 (1008)
++||||+++++|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 100 ~lv~e~~~~~~L~~~~~~~~---------~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~ 167 (314)
T 3com_A 100 WIVMEYCGAGSVSDIIRLRN---------KTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLA 167 (314)
T ss_dssp EEEEECCTTEEHHHHHHHHT---------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEEC
T ss_pred EEEeecCCCCCHHHHHHhcC---------CCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEe
Confidence 99999999999999986322 1689999999999999999999998 99999999999999999999999
Q ss_pred ccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHHhhC
Q 045798 842 DFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFARMAL 921 (1008)
Q Consensus 842 Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~~~~ 921 (1008)
|||.+......... .....|++.|+|||++.+..++.++||||||+++|+|++|+.||....... .........
T Consensus 168 dfg~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~~~ 241 (314)
T 3com_A 168 DFGVAGQLTDTMAK----RNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMR--AIFMIPTNP 241 (314)
T ss_dssp CCTTCEECBTTBSC----BCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHHHHHHSC
T ss_pred ecccchhhhhhccc----cCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHH--HHHHHhcCC
Confidence 99999865443221 223458999999999999899999999999999999999999986421110 000000000
Q ss_pred CcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 922 PNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 922 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
+ +. .......+..+.+++.+||+.||.+|||+.|+++
T Consensus 242 ~--------~~--------------------~~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 242 P--------PT--------------------FRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp C--------CC--------------------CSSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred C--------cc--------------------cCCcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 0 00 0001123456889999999999999999999986
No 246
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=4.2e-38 Score=371.59 Aligned_cols=256 Identities=30% Similarity=0.461 Sum_probs=204.4
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCceEE
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 762 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 762 (1008)
.++|++.+.||+|+||.||+|.+. .+..||||+++... ...+.|.+|+++|++++||||++++++|.. +..+
T Consensus 266 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~------~~~~ 337 (535)
T 2h8h_A 266 RESLRLEVKLGQGCFGEVWMGTWN-GTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE------EPIY 337 (535)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS------SSCE
T ss_pred hhhhhhheecccCCCeEEEEEEEC-CCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee------ccce
Confidence 467889999999999999999996 56789999998543 335689999999999999999999998632 4579
Q ss_pred EEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeEEcc
Q 045798 763 IVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGHIGD 842 (1008)
Q Consensus 763 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 842 (1008)
+||||+++|+|.+++.... ...+++.+++.|+.||+.||+|||+. +|+||||||+|||++.++.+||+|
T Consensus 338 lv~e~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~D 406 (535)
T 2h8h_A 338 IVTEYMSKGSLLDFLKGET--------GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVAD 406 (535)
T ss_dssp EEECCCTTEEHHHHHSHHH--------HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECC
T ss_pred EeeehhcCCcHHHHHhhcC--------CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcc
Confidence 9999999999999997432 11589999999999999999999998 999999999999999999999999
Q ss_pred cCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHh-CCCCCCccccCCccHHHHHHhhC
Q 045798 843 FGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVT-AKKPTDVMFEGDLNLHNFARMAL 921 (1008)
Q Consensus 843 fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-G~~pf~~~~~~~~~~~~~~~~~~ 921 (1008)
||+++...... ........++..|+|||++.+..++.++|||||||++|||++ |+.||...... ...
T Consensus 407 FG~a~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~-----~~~---- 474 (535)
T 2h8h_A 407 FGLARLIEDNE---YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR-----EVL---- 474 (535)
T ss_dssp TTSTTTCCCHH---HHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHH-----HHH----
T ss_pred cccceecCCCc---eecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-----HHH----
Confidence 99998664321 111223347789999999988899999999999999999999 89998643111 000
Q ss_pred CcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHHHHHHH
Q 045798 922 PNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHELQSVK 992 (1008)
Q Consensus 922 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~i~ 992 (1008)
..+... .+++ ....++..+.++|.+||+.||++|||+++|++.|+.+.
T Consensus 475 -----~~i~~~--------------~~~~----~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~ 522 (535)
T 2h8h_A 475 -----DQVERG--------------YRMP----CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 522 (535)
T ss_dssp -----HHHHTT--------------CCCC----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred -----HHHHcC--------------CCCC----CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 000000 0000 01134567899999999999999999999999998753
No 247
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=5.6e-38 Score=344.79 Aligned_cols=271 Identities=24% Similarity=0.273 Sum_probs=183.8
Q ss_pred HhcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEecccc-chhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCce
Q 045798 682 ATNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQC-EGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDF 760 (1008)
Q Consensus 682 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 760 (1008)
..++|++.+.||+|+||.||+|.+..+++.||||++.... ....+.+.+|++++++++||||+++++++ ...+.
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~ 87 (303)
T 2vwi_A 13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSF-----VVKDE 87 (303)
T ss_dssp CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEE-----ESSSC
T ss_pred chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEE-----eecCC
Confidence 4578999999999999999999998889999999987543 33456789999999999999999999985 44566
Q ss_pred EEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeEE
Q 045798 761 KAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGHI 840 (1008)
Q Consensus 761 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 840 (1008)
.++||||+++++|.+++........ .....+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||
T Consensus 88 ~~lv~e~~~~~~L~~~l~~~~~~~~--~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl 162 (303)
T 2vwi_A 88 LWLVMKLLSGGSVLDIIKHIVAKGE--HKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQI 162 (303)
T ss_dssp EEEEEECCTTCBHHHHHHHHHHTTT--TTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEE
T ss_pred cEEEehhccCCchHHHHHHHhhccc--cccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEE
Confidence 8999999999999999864210000 0011689999999999999999999998 9999999999999999999999
Q ss_pred cccCcccccccccCcc-ccccccccccccccCccccCC-CCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHH
Q 045798 841 GDFGLARFHQEVSNST-LSSSVGVKGTIGYTAPEYGLG-SEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFAR 918 (1008)
Q Consensus 841 ~Dfg~a~~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~ 918 (1008)
+|||.+.......... ........||+.|+|||++.+ ..++.++||||||+++|||++|+.||......... ....
T Consensus 163 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~--~~~~ 240 (303)
T 2vwi_A 163 ADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVL--MLTL 240 (303)
T ss_dssp CCCHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHH--HHHH
T ss_pred EeccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHH--HHHh
Confidence 9999997654332111 111223458999999999865 46899999999999999999999998753221110 0000
Q ss_pred hhCCcchhh-hhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 919 MALPNQVMD-IVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 919 ~~~~~~~~~-~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
...+..... ..++. . ....+.++.+++.+||+.||.+|||+.|+++
T Consensus 241 ~~~~~~~~~~~~~~~----------------~------~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 241 QNDPPSLETGVQDKE----------------M------LKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp TSSCCCTTC-----C----------------C------CCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred ccCCCccccccccch----------------h------hhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 000000000 00000 0 0113456789999999999999999999987
No 248
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-37 Score=348.73 Aligned_cols=255 Identities=23% Similarity=0.310 Sum_probs=199.4
Q ss_pred hcCCCCCceEeeccCeeEEEEEEc---CCCeEEEEEEecccc----chhhHHHHHHHHHHhhc-CCCCceeeeecccccc
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALD---EDGIVVAIKVINLQC----EGASKSFMAECKALKNI-RHRNLVKVITSCSSID 754 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~---~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 754 (1008)
.++|++.+.||+|+||.||+|+.. .+++.||||+++... ....+.+.+|+++++++ +||||+++++++
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~---- 128 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAF---- 128 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEE----
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEE----
Confidence 467999999999999999999984 478999999987432 23446678899999999 799999999984
Q ss_pred ccCCceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecC
Q 045798 755 FQGNDFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDN 834 (1008)
Q Consensus 755 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~ 834 (1008)
..++..++||||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.
T Consensus 129 -~~~~~~~lv~e~~~~~~L~~~l~~~~----------~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~ 194 (355)
T 1vzo_A 129 -QTETKLHLILDYINGGELFTHLSQRE----------RFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDS 194 (355)
T ss_dssp -EETTEEEEEECCCCSCBHHHHHHHHS----------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECT
T ss_pred -eeCceEEEEeecCCCCCHHHHHHHcC----------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECC
Confidence 45667999999999999999997543 689999999999999999999998 9999999999999999
Q ss_pred CCCeEEcccCcccccccccCccccccccccccccccCccccCC--CCCCcccchhhHHHHHHHHHhCCCCCCccccCCcc
Q 045798 835 DLSGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLG--SEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLN 912 (1008)
Q Consensus 835 ~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~ 912 (1008)
++.+||+|||+++........ ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||........
T Consensus 195 ~~~~kl~DfG~a~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~- 270 (355)
T 1vzo_A 195 NGHVVLTDFGLSKEFVADETE---RAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS- 270 (355)
T ss_dssp TSCEEESCSSEEEECCGGGGG---GGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCC-
T ss_pred CCcEEEeeCCCCeecccCCCC---cccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccch-
Confidence 999999999999865433221 1223569999999999886 3478999999999999999999999964322211
Q ss_pred HHHHHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCC-----CHHHHHHH
Q 045798 913 LHNFARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRM-----NMTNVVHE 987 (1008)
Q Consensus 913 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~evl~~ 987 (1008)
........ ....+ .. ....+..+.+++.+||+.||.+|| |++|+++.
T Consensus 271 ~~~~~~~~------------~~~~~----------~~------~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h 322 (355)
T 1vzo_A 271 QAEISRRI------------LKSEP----------PY------PQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH 322 (355)
T ss_dssp HHHHHHHH------------HHCCC----------CC------CTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred HHHHHHHH------------hccCC----------CC------CcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence 11111100 00000 00 012344578999999999999999 99999874
No 249
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=2.3e-37 Score=373.68 Aligned_cols=245 Identities=22% Similarity=0.285 Sum_probs=200.3
Q ss_pred HhcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccc---cchhhHHHHHHHHHHhhc-CCCCceeeeeccccccccC
Q 045798 682 ATNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQ---CEGASKSFMAECKALKNI-RHRNLVKVITSCSSIDFQG 757 (1008)
Q Consensus 682 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 757 (1008)
..++|++.+.||+|+||.||+|++..+++.||||+++.. .....+.+..|.+++..+ +||+|++++++ +++
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~-----~~~ 413 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSC-----FQT 413 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEE-----CBC
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEE-----EEe
Confidence 356899999999999999999999999999999999743 234456788999999988 79999999998 566
Q ss_pred CceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCC
Q 045798 758 NDFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLS 837 (1008)
Q Consensus 758 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 837 (1008)
.+..|+||||+++|+|.+++.... .+++..++.++.||+.||+|||+. +||||||||+|||++.++.
T Consensus 414 ~~~~~lV~E~~~gg~L~~~l~~~~----------~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ 480 (674)
T 3pfq_A 414 MDRLYFVMEYVNGGDLMYHIQQVG----------RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGH 480 (674)
T ss_dssp SSEEEEEEECCCSCBHHHHHHHHS----------SCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSC
T ss_pred CCEEEEEEeCcCCCcHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCc
Confidence 778999999999999999997654 789999999999999999999998 9999999999999999999
Q ss_pred eEEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHH
Q 045798 838 GHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFA 917 (1008)
Q Consensus 838 ~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~ 917 (1008)
+||+|||+|+....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ...
T Consensus 481 ikL~DFGla~~~~~~~~----~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~-----~~~ 551 (674)
T 3pfq_A 481 IKIADFGMCKENIWDGV----TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED-----ELF 551 (674)
T ss_dssp EEECCCTTCEECCCTTC----CBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHH
T ss_pred EEEeecceeeccccCCc----ccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHH-----HHH
Confidence 99999999985432221 123456999999999999999999999999999999999999998643110 010
Q ss_pred HhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCH
Q 045798 918 RMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNM 981 (1008)
Q Consensus 918 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~ 981 (1008)
. .+....+ .++ ...+.++.+++.+||+.||++||++
T Consensus 552 ~--------~i~~~~~--------------~~p------~~~s~~~~~li~~lL~~dP~~R~~~ 587 (674)
T 3pfq_A 552 Q--------SIMEHNV--------------AYP------KSMSKEAVAICKGLMTKHPGKRLGC 587 (674)
T ss_dssp H--------HHHSSCC--------------CCC------TTSCHHHHHHHHHHSCSSSTTCTTC
T ss_pred H--------HHHhCCC--------------CCC------ccCCHHHHHHHHHHccCCHHHCCCC
Confidence 0 0000000 001 1234567899999999999999998
No 250
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=3.1e-37 Score=344.59 Aligned_cols=255 Identities=20% Similarity=0.266 Sum_probs=195.3
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEecccc-chhhHHHHHHHHH-HhhcCCCCceeeeeccccccccCCce
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQC-EGASKSFMAECKA-LKNIRHRNLVKVITSCSSIDFQGNDF 760 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~-l~~l~h~niv~~~~~~~~~~~~~~~~ 760 (1008)
.++|++.+.||+|+||.||+|.+..+|+.||||+++... .....++..|+.+ ++.++||||+++++++ ..++.
T Consensus 50 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~-----~~~~~ 124 (340)
T 3an0_A 50 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGAL-----FREGD 124 (340)
T ss_dssp SSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEE-----ECSSC
T ss_pred hhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEE-----EeCCc
Confidence 567999999999999999999998899999999997543 2334556666665 7778999999999995 44567
Q ss_pred EEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeEE
Q 045798 761 KAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGHI 840 (1008)
Q Consensus 761 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 840 (1008)
.++||||++ |+|.+++...... ...+++..++.++.||+.||+|||+. .+|+||||||+||+++.++.+||
T Consensus 125 ~~lv~e~~~-~~L~~~l~~~~~~------~~~l~~~~~~~i~~qi~~~l~~lH~~--~~ivH~Dlkp~NIl~~~~~~~kl 195 (340)
T 3an0_A 125 VWICMELMD-TSLDKFYKQVIDK------GQTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALGQVKM 195 (340)
T ss_dssp EEEEECCCS-EEHHHHHHHHHHT------SCCCCHHHHHHHHHHHHHHHHHHHHH--TCCCCCSCCSTTEEECSTTCEEE
T ss_pred EEEEHHHhh-CcHHHHHHHHHhc------CCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEE
Confidence 999999996 4998888642100 11789999999999999999999973 28999999999999999999999
Q ss_pred cccCcccccccccCccccccccccccccccCccccC----CCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHH
Q 045798 841 GDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGL----GSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNF 916 (1008)
Q Consensus 841 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~ 916 (1008)
+|||+++....... .....||+.|+|||++. ...++.++|||||||++|||++|+.||.............
T Consensus 196 ~Dfg~~~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~~~~ 270 (340)
T 3an0_A 196 CDFGISGYLVDSVA-----KTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQV 270 (340)
T ss_dssp CCCSHHHHHSCHHH-----HHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHH
T ss_pred eeCCCceecccccc-----cccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHHHHH
Confidence 99999986543211 11235899999999964 3478999999999999999999999986421111111111
Q ss_pred HHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 917 ARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 917 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
.....+. . ....++.++.+++.+||+.||++|||+.|+++
T Consensus 271 ~~~~~~~---------~---------------------~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 271 VEEPSPQ---------L---------------------PADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp HHSCCCC---------C---------------------CGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred hcCCCCC---------C---------------------CcccCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 1100000 0 00123456899999999999999999999987
No 251
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=8.6e-37 Score=349.23 Aligned_cols=284 Identities=19% Similarity=0.245 Sum_probs=204.2
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhhcC--------CCCceeeeecccccc
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKNIR--------HRNLVKVITSCSSID 754 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--------h~niv~~~~~~~~~~ 754 (1008)
.++|++.+.||+|+||+||+|++..+++.||||+++.. ....+.+.+|++++++++ |+||+++++++....
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 36899999999999999999999889999999999744 344577899999999985 788999999864321
Q ss_pred ccCCceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecC
Q 045798 755 FQGNDFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDN 834 (1008)
Q Consensus 755 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~ 834 (1008)
..+...++||||+ ++++.+++...... .+++..++.++.||+.||+|||++ .+|+||||||+|||++.
T Consensus 115 -~~~~~~~lv~e~~-~~~l~~~~~~~~~~--------~~~~~~~~~i~~qi~~aL~~lH~~--~givHrDikp~NIll~~ 182 (397)
T 1wak_A 115 -VNGTHICMVFEVL-GHHLLKWIIKSNYQ--------GLPLPCVKKIIQQVLQGLDYLHTK--CRIIHTDIKPENILLSV 182 (397)
T ss_dssp -TTEEEEEEEECCC-CCBHHHHHHHTTTS--------CCCHHHHHHHHHHHHHHHHHHHHT--TCEECCCCSGGGEEECC
T ss_pred -CCCceEEEEEecc-CccHHHHHHhcccC--------CCCHHHHHHHHHHHHHHHHHHHHh--CCEecCCCCHHHeeEec
Confidence 2456789999999 66777776544211 689999999999999999999984 28999999999999987
Q ss_pred CC-------------------------------------------------CeEEcccCcccccccccCccccccccccc
Q 045798 835 DL-------------------------------------------------SGHIGDFGLARFHQEVSNSTLSSSVGVKG 865 (1008)
Q Consensus 835 ~~-------------------------------------------------~~kL~Dfg~a~~~~~~~~~~~~~~~~~~g 865 (1008)
++ .+||+|||.++..... .....|
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~-------~~~~~g 255 (397)
T 1wak_A 183 NEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH-------FTEDIQ 255 (397)
T ss_dssp CHHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC-------SCSCCS
T ss_pred cchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc-------CccCCC
Confidence 75 7999999999865432 122458
Q ss_pred cccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCcc-----HHHHHHhhC--Ccchhh---hhcccccC
Q 045798 866 TIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLN-----LHNFARMAL--PNQVMD---IVDPILRN 935 (1008)
Q Consensus 866 t~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~-----~~~~~~~~~--~~~~~~---~~d~~l~~ 935 (1008)
|+.|+|||++.+..++.++|||||||++|||++|+.||......... ......... +..... ........
T Consensus 256 t~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 335 (397)
T 1wak_A 256 TRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTK 335 (397)
T ss_dssp CGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCT
T ss_pred CCcccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCC
Confidence 99999999999999999999999999999999999999754322211 111111110 100000 00000000
Q ss_pred chHHhh-----hhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 936 DEEILA-----STDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 936 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
...... ................+.+..+.+++.+||+.||++|||++|+++
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 336 KGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp TSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred ccccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 000000 000000000111123466788999999999999999999999985
No 252
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=5.1e-37 Score=340.86 Aligned_cols=282 Identities=23% Similarity=0.293 Sum_probs=204.6
Q ss_pred HhcCCCCCceEeeccCeeEEEEEEc-CCCeEEEEEEeccccc--hhhHHHHHHHHHHhhc---CCCCceeeeeccccccc
Q 045798 682 ATNGFSSTHLIGVGSFGCVYKGALD-EDGIVVAIKVINLQCE--GASKSFMAECKALKNI---RHRNLVKVITSCSSIDF 755 (1008)
Q Consensus 682 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~h~niv~~~~~~~~~~~ 755 (1008)
+.++|++.+.||+|+||.||+|++. .+++.||+|+++.... .....+.+|+.+++.+ +||||++++++|.....
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 4678999999999999999999994 6789999999874322 2234677888887776 89999999999764333
Q ss_pred cCCceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCC
Q 045798 756 QGNDFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDND 835 (1008)
Q Consensus 756 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 835 (1008)
......++||||++ |+|.+++...... .+++..++.++.||+.||+|||+. +|+||||||+||+++.+
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~~--------~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~ 156 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVPEP--------GVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSS 156 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSCTT--------CSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTT
T ss_pred CCCceEEEEEecCC-CCHHHHHHhcccC--------CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCC
Confidence 45677899999996 6999998765421 589999999999999999999998 99999999999999999
Q ss_pred CCeEEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHH
Q 045798 836 LSGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHN 915 (1008)
Q Consensus 836 ~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~ 915 (1008)
+.+||+|||.++...... ......||..|+|||++.+..++.++|||||||++|||++|+.||......+ ....
T Consensus 157 ~~~kl~Dfg~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~ 230 (326)
T 1blx_A 157 GQIKLADFGLARIYSFQM-----ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD-QLGK 230 (326)
T ss_dssp CCEEECSCCSCCCCCGGG-----GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHH
T ss_pred CCEEEecCcccccccCCC-----CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHH-HHHH
Confidence 999999999998654322 1223458999999999999999999999999999999999999987432211 1111
Q ss_pred HHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 916 FARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 916 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
............+......... ... ..............+..+.+++.+||+.||++|||+.|+++
T Consensus 231 i~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 231 ILDVIGLPGEEDWPRDVALPRQ----AFH-SKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp HHHHHCCCCGGGSCTTCSSCGG----GSC-CCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHHHcCCCCcccCccccccchh----hhc-ccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 1111110000000000000000 000 00000000001124556889999999999999999999985
No 253
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=8.1e-37 Score=335.81 Aligned_cols=255 Identities=19% Similarity=0.290 Sum_probs=198.0
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEecccc----chhhHHHHHHHHHHhhcCCCCceeeeeccccccccCC
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQC----EGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGN 758 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 758 (1008)
.++|++.+.||+|+||.||+|.+..+++.||+|+++... ....+.+.+|++++++++||||+++++++.. ...
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~~ 80 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYN---EEK 80 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEC---C--
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEc---CCC
Confidence 578999999999999999999998899999999997432 2345789999999999999999999998632 445
Q ss_pred ceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCe
Q 045798 759 DFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSG 838 (1008)
Q Consensus 759 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 838 (1008)
...++||||++++ |.+++...... .+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+
T Consensus 81 ~~~~lv~e~~~~~-l~~~~~~~~~~--------~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~ 148 (305)
T 2wtk_C 81 QKMYMVMEYCVCG-MQEMLDSVPEK--------RFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTL 148 (305)
T ss_dssp -CEEEEEECCSEE-HHHHHHHSTTC--------SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCE
T ss_pred CeEEEEehhccCC-HHHHHHhCccc--------ccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcE
Confidence 6789999999765 77777654321 689999999999999999999998 99999999999999999999
Q ss_pred EEcccCcccccccccCccccccccccccccccCccccCCCC--CCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHH
Q 045798 839 HIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSE--VSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNF 916 (1008)
Q Consensus 839 kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~ 916 (1008)
||+|||.+.......... ......||+.|+|||++.+.. ++.++||||||+++|||++|+.||..... ...
T Consensus 149 kl~dfg~~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~ 221 (305)
T 2wtk_C 149 KISALGVAEALHPFAADD--TCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNI-----YKL 221 (305)
T ss_dssp EECCCTTCEECCTTCSSC--EECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSH-----HHH
T ss_pred EeeccccccccCcccccc--ccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchH-----HHH
Confidence 999999998654322211 122345899999999987644 47799999999999999999999864211 000
Q ss_pred HHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHH
Q 045798 917 ARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHE 987 (1008)
Q Consensus 917 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 987 (1008)
... +..... ..+ ..++..+.+++.+||+.||.+|||++|+++.
T Consensus 222 ~~~--------i~~~~~--------------~~~------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 222 FEN--------IGKGSY--------------AIP------GDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp HHH--------HHHCCC--------------CCC------SSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred HHH--------HhcCCC--------------CCC------CccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 000 000000 000 1234567899999999999999999999863
No 254
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=8e-38 Score=341.35 Aligned_cols=262 Identities=26% Similarity=0.351 Sum_probs=195.7
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcC-CC--eEEEEEEeccc---cchhhHHHHHHHHHHhhcCCCCceeeeecccccccc
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDE-DG--IVVAIKVINLQ---CEGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQ 756 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~-~~--~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 756 (1008)
.++|++.+.||+|+||.||+|.+.. ++ ..||+|+++.. .....+.+.+|++++++++||||+++++++..
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---- 92 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT---- 92 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS----
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcc----
Confidence 4679999999999999999998643 33 36999998743 23456789999999999999999999999542
Q ss_pred CCceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCC
Q 045798 757 GNDFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDL 836 (1008)
Q Consensus 757 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 836 (1008)
+ ..++||||+++++|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++
T Consensus 93 -~-~~~~v~e~~~~~~L~~~l~~~~---------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~ 158 (291)
T 1u46_A 93 -P-PMKMVTELAPLGSLLDRLRKHQ---------GHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRD 158 (291)
T ss_dssp -S-SCEEEEECCTTCBHHHHHHHHG---------GGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETT
T ss_pred -C-CceeeEecccCCCHHHHHHhcc---------CCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCC
Confidence 2 3789999999999999987542 1689999999999999999999998 999999999999999999
Q ss_pred CeEEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHh-CCCCCCccccCCccHHH
Q 045798 837 SGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVT-AKKPTDVMFEGDLNLHN 915 (1008)
Q Consensus 837 ~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-G~~pf~~~~~~~~~~~~ 915 (1008)
.+||+|||++.......... .......+|..|+|||++.+..++.++||||||+++|+|++ |+.||...... .
T Consensus 159 ~~kl~Dfg~~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-----~ 232 (291)
T 1u46_A 159 LVKIGDFGLMRALPQNDDHY-VMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS-----Q 232 (291)
T ss_dssp EEEECCCTTCEECCC-CCEE-EC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----H
T ss_pred CEEEccccccccccccccch-hhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHH-----H
Confidence 99999999998765433221 11223457889999999988889999999999999999999 99998643211 0
Q ss_pred HHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHHHHHHHHH
Q 045798 916 FARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHELQSVKNI 994 (1008)
Q Consensus 916 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~i~~~ 994 (1008)
..... ..... . .+....++.++.+++.+||+.||++|||+.++++.|+++...
T Consensus 233 ~~~~~--------~~~~~--------------~----~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 285 (291)
T 1u46_A 233 ILHKI--------DKEGE--------------R----LPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPT 285 (291)
T ss_dssp HHHHH--------HTSCC--------------C----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred HHHHH--------HccCC--------------C----CCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCcc
Confidence 00000 00000 0 000112455689999999999999999999999999887654
No 255
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=2.1e-37 Score=337.81 Aligned_cols=255 Identities=20% Similarity=0.242 Sum_probs=185.4
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccc--hhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCce
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCE--GASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDF 760 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 760 (1008)
.++|++.+.||+|+||.||+|++..+++.||+|+++.... ...+.+.++...++.++||||+++++++ ..++.
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~-----~~~~~ 80 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGAL-----FREGD 80 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-----ECSSS
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeee-----eccCC
Confidence 5689999999999999999999988999999999975422 2233455555668888999999999995 45567
Q ss_pred EEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeEE
Q 045798 761 KAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGHI 840 (1008)
Q Consensus 761 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 840 (1008)
.++||||++ |+|.+++...... ...+++..++.++.|++.||+|||+. .+|+||||||+||+++.++.+||
T Consensus 81 ~~lv~e~~~-~~l~~~l~~~~~~------~~~~~~~~~~~i~~qi~~~l~~lH~~--~~i~H~dlkp~Nil~~~~~~~kl 151 (290)
T 3fme_A 81 VWICMELMD-TSLDKFYKQVIDK------GQTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALGQVKM 151 (290)
T ss_dssp EEEEEECCS-EEHHHHHHHHHHT------TCCCCHHHHHHHHHHHHHHHHHHHHH--SCCCCCCCSGGGCEECTTCCEEB
T ss_pred EEEEEehhc-cchHHHHHHHHhc------CCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEE
Confidence 899999996 5888877542110 11689999999999999999999983 28999999999999999999999
Q ss_pred cccCcccccccccCccccccccccccccccCcccc----CCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHH
Q 045798 841 GDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYG----LGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNF 916 (1008)
Q Consensus 841 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~ 916 (1008)
+|||.+......... ....||+.|+|||++ .+..++.++||||+||++|||++|+.||.............
T Consensus 152 ~Dfg~~~~~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~ 226 (290)
T 3fme_A 152 CDFGISGYLVDDVAK-----DIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQV 226 (290)
T ss_dssp CCC--------------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHH
T ss_pred eecCCcccccccccc-----cccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHH
Confidence 999999865443221 123589999999995 56678999999999999999999999986422111111111
Q ss_pred HHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 917 ARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 917 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
.....+.. .....+.++.+++.+||+.||++|||++|+++
T Consensus 227 ~~~~~~~~------------------------------~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 227 VEEPSPQL------------------------------PADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp HHSCCCCC------------------------------CTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred hccCCCCc------------------------------ccccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 11100000 00123456799999999999999999999987
No 256
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=6.1e-37 Score=345.33 Aligned_cols=291 Identities=20% Similarity=0.246 Sum_probs=194.2
Q ss_pred HHHHHHHhcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhhcCCCCceeeeeccccccc
Q 045798 676 YKSLLKATNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKNIRHRNLVKVITSCSSIDF 755 (1008)
Q Consensus 676 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 755 (1008)
..+.....++|++.+.||+|+||.||+|.+..+++.||||++... ......+.+|++.++.++||||+++++++.....
T Consensus 15 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~ 93 (360)
T 3e3p_A 15 DERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQD-PRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGE 93 (360)
T ss_dssp SHHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECC-TTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECS
T ss_pred hhhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecC-ccccHHHHHHHHHHHhcCCCCcccHHHhhhcccc
Confidence 345667789999999999999999999999889999999998644 3334567788888999999999999999754332
Q ss_pred --cCCceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHh--hCCCCCceeccCCCCCee
Q 045798 756 --QGNDFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLH--HHCQEPILHCDLKPSNIL 831 (1008)
Q Consensus 756 --~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH--~~~~~~ivH~Dlkp~NIl 831 (1008)
....+.++||||+++ +|.+.+...... ...+++..+..++.|++.||+||| +. +|+||||||+||+
T Consensus 94 ~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~------~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIl 163 (360)
T 3e3p_A 94 RDRRDIYLNVVMEYVPD-TLHRCCRNYYRR------QVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVL 163 (360)
T ss_dssp SCTTCEEEEEEEECCSC-BHHHHHHHHHTT------TCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEE
T ss_pred ccccceeEEEEeecccc-cHHHHHHHHhhc------ccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEE
Confidence 223347899999965 554443321000 116889999999999999999999 76 9999999999999
Q ss_pred ecC-CCCeEEcccCcccccccccCccccccccccccccccCccccCCCC-CCcccchhhHHHHHHHHHhCCCCCCccccC
Q 045798 832 LDN-DLSGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSE-VSTNGDVYSYGILLLEMVTAKKPTDVMFEG 909 (1008)
Q Consensus 832 l~~-~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwslG~vl~elltG~~pf~~~~~~ 909 (1008)
++. ++.+||+|||+++....... .....||+.|+|||++.+.. ++.++|||||||++|||++|+.||......
T Consensus 164 l~~~~~~~kl~Dfg~a~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~ 238 (360)
T 3e3p_A 164 VNEADGTLKLCDFGSAKKLSPSEP-----NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSA 238 (360)
T ss_dssp EETTTTEEEECCCTTCBCCCTTSC-----CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred EeCCCCcEEEeeCCCceecCCCCC-----cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChH
Confidence 996 89999999999986654322 12345899999999987654 899999999999999999999998753221
Q ss_pred CccHHHHHHhhCCc--chhhhhcccccCchHH-hhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 910 DLNLHNFARMALPN--QVMDIVDPILRNDEEI-LASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 910 ~~~~~~~~~~~~~~--~~~~~~d~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
.......+..... .....+++........ .........+.. .....+.++.+++.+||+.||.+|||+.|+++
T Consensus 239 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 314 (360)
T 3e3p_A 239 -GQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSD---HSLKDAKEAYDLLSALLQYLPEERMKPYEALC 314 (360)
T ss_dssp -HHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTT---CCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred -HHHHHHHHHcCCCCHHHHHhcccchhhccccccccCCcccccch---hhccccHHHHHHHHHHhccCccccCCHHHHhc
Confidence 1111221111111 1111111110000000 000000000000 00124567899999999999999999999986
No 257
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=6.4e-38 Score=354.21 Aligned_cols=267 Identities=11% Similarity=0.035 Sum_probs=184.5
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccc---hhhHHHHHHHHHHhhc--CCCCceeeeeccc------
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCE---GASKSFMAECKALKNI--RHRNLVKVITSCS------ 751 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l--~h~niv~~~~~~~------ 751 (1008)
...|++.+.||+|+||.||+|.+..+++.||||+++.... ...+.+.+|+++++.+ +||||++++..+.
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence 3458899999999999999999988999999999986432 3455678886555555 6999888553321
Q ss_pred -cccc------------cCCceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHH------HHHHHHHHHHHHHH
Q 045798 752 -SIDF------------QGNDFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQR------ISIAIDVASALDYL 812 (1008)
Q Consensus 752 -~~~~------------~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~------~~i~~qi~~~L~~L 812 (1008)
.... ......|+||||++ |+|.+++..... .+.+..+ ..++.||+.||+||
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~---------~~~~~~~~~~~vk~~i~~qi~~aL~~L 210 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF---------VYVFRGDEGILALHILTAQLIRLAANL 210 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH---------SCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc---------ccchhhhhhhhhHHHHHHHHHHHHHHH
Confidence 1000 00145899999997 899999976421 2344444 67889999999999
Q ss_pred hhCCCCCceeccCCCCCeeecCCCCeEEcccCcccccccccCccccccccccccccccCccccCC--CCCCcccchhhHH
Q 045798 813 HHHCQEPILHCDLKPSNILLDNDLSGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLG--SEVSTNGDVYSYG 890 (1008)
Q Consensus 813 H~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwslG 890 (1008)
|++ +|+||||||+|||++.++.+||+|||+|+....... ...+|+.|+|||++.+ ..++.++||||||
T Consensus 211 H~~---~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~-------~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG 280 (371)
T 3q60_A 211 QSK---GLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRGP-------ASSVPVTYAPREFLNASTATFTHALNAWQLG 280 (371)
T ss_dssp HHT---TEEETTCSGGGEEECTTSCEEECCGGGEEETTCEEE-------GGGSCGGGCCHHHHTCSEEECCHHHHHHHHH
T ss_pred HHC---CCccCcCCHHHEEECCCCCEEEEecceeeecCCCcc-------CccCCcCCcChhhccCCCCCcCccccHHHHH
Confidence 998 999999999999999999999999999986543211 2346799999999987 6799999999999
Q ss_pred HHHHHHHhCCCCCCccccCCccHHHHHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcc
Q 045798 891 ILLLEMVTAKKPTDVMFEGDLNLHNFARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVAC 970 (1008)
Q Consensus 891 ~vl~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 970 (1008)
|++|||++|+.||......... .+..... ...... ....+.....+..+.+++.+|
T Consensus 281 ~il~elltg~~Pf~~~~~~~~~--~~~~~~~----~~~~~~------------------~~~~~~~~~~~~~~~~li~~~ 336 (371)
T 3q60_A 281 LSIYRVWCLFLPFGLVTPGIKG--SWKRPSL----RVPGTD------------------SLAFGSCTPLPDFVKTLIGRF 336 (371)
T ss_dssp HHHHHHHHSSCSTTBCCTTCTT--CCCBCCT----TSCCCC------------------SCCCTTSSCCCHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCCcCccccc--chhhhhh----hhcccc------------------ccchhhccCCCHHHHHHHHHH
Confidence 9999999999999754221100 0000000 000000 000000112355689999999
Q ss_pred cCcCCCCCCCHHHHHH--HHHHHHH
Q 045798 971 SMESPQDRMNMTNVVH--ELQSVKN 993 (1008)
Q Consensus 971 l~~dP~~RPt~~evl~--~L~~i~~ 993 (1008)
|+.||++|||+.|+++ .++.+.+
T Consensus 337 L~~dP~~Rpt~~e~l~hp~f~~~~~ 361 (371)
T 3q60_A 337 LNFDRRRRLLPLEAMETPEFLQLQN 361 (371)
T ss_dssp TCSSTTTCCCHHHHTTSHHHHHHHH
T ss_pred cCCChhhCCCHHHHhcCHHHHHHHH
Confidence 9999999999999986 3444443
No 258
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=1.1e-36 Score=341.60 Aligned_cols=265 Identities=20% Similarity=0.271 Sum_probs=201.2
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccchh-----------------hHHHHHHHHHHhhcCCCCcee
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGA-----------------SKSFMAECKALKNIRHRNLVK 745 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~-----------------~~~~~~E~~~l~~l~h~niv~ 745 (1008)
.++|++.+.||+|+||.||+|.+ +++.||+|++....... .+.+.+|++++++++||||++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~ 107 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLT 107 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcce
Confidence 46899999999999999999999 89999999997432111 178999999999999999999
Q ss_pred eeeccccccccCCceEEEEEeccCCCChhcc------cccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhh-CCCC
Q 045798 746 VITSCSSIDFQGNDFKAIVYEYMPNGSLEKW------LHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHH-HCQE 818 (1008)
Q Consensus 746 ~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~------l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~~ 818 (1008)
+++++ ...+..++||||+++|+|.++ +..... ..+++..++.++.|++.||+|||+ .
T Consensus 108 ~~~~~-----~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~--------~~~~~~~~~~i~~qi~~~l~~lH~~~--- 171 (348)
T 2pml_X 108 CEGII-----TNYDEVYIIYEYMENDSILKFDEYFFVLDKNYT--------CFIPIQVIKCIIKSVLNSFSYIHNEK--- 171 (348)
T ss_dssp CSEEE-----ESSSEEEEEEECCTTCBSSEESSSEESSCSSSC--------CCCCHHHHHHHHHHHHHHHHHHHHTS---
T ss_pred EEEEE-----eeCCeEEEEEeccCCCcHHHHHHHhhhhhhccc--------cCCCHHHHHHHHHHHHHHHHHHhccC---
Confidence 99995 456679999999999999999 543211 278999999999999999999998 7
Q ss_pred CceeccCCCCCeeecCCCCeEEcccCcccccccccCccccccccccccccccCccccCCC-CCCc-ccchhhHHHHHHHH
Q 045798 819 PILHCDLKPSNILLDNDLSGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGS-EVST-NGDVYSYGILLLEM 896 (1008)
Q Consensus 819 ~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~sDvwslG~vl~el 896 (1008)
+|+||||||+||+++.++.+||+|||.+...... ......|+..|+|||++.+. .++. ++|||||||++|||
T Consensus 172 ~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l 245 (348)
T 2pml_X 172 NICHRDVKPSNILMDKNGRVKLSDFGESEYMVDK------KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVM 245 (348)
T ss_dssp CEECCCCCGGGEEECTTSCEEECCCTTCEECBTT------EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHH
T ss_pred CEeecCCChHhEEEcCCCcEEEeccccccccccc------cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHH
Confidence 9999999999999999999999999999865433 12234589999999999887 6666 99999999999999
Q ss_pred HhCCCCCCccccCCccHHHHHHhh--CCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcC
Q 045798 897 VTAKKPTDVMFEGDLNLHNFARMA--LPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMES 974 (1008)
Q Consensus 897 ltG~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 974 (1008)
++|+.||................. .+........+..... ........+.++.+++.+||+.|
T Consensus 246 ~~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~l~~li~~~L~~d 310 (348)
T 2pml_X 246 FYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKK---------------STCSNNFLSNEDIDFLKLFLRKN 310 (348)
T ss_dssp HHSSCSSCCSSCSHHHHHHHTSCCCCCCCSSSSSTTTTCC-----------------------CCCHHHHHHHHHHCCSS
T ss_pred HhCCCCCCCCCcHHHHHHHHhccCcCCccchhhhhccccccc---------------cccchhhcCHHHHHHHHHHccCC
Confidence 999999874322111111111100 0100000000000000 00001234567899999999999
Q ss_pred CCCCCCHHHHHH
Q 045798 975 PQDRMNMTNVVH 986 (1008)
Q Consensus 975 P~~RPt~~evl~ 986 (1008)
|.+|||++|+++
T Consensus 311 P~~Rps~~e~l~ 322 (348)
T 2pml_X 311 PAERITSEDALK 322 (348)
T ss_dssp GGGSCCHHHHHT
T ss_pred hhhCCCHHHHhc
Confidence 999999999998
No 259
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=8e-37 Score=332.46 Aligned_cols=252 Identities=25% Similarity=0.292 Sum_probs=200.4
Q ss_pred HhcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEecccc--chhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCc
Q 045798 682 ATNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQC--EGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGND 759 (1008)
Q Consensus 682 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 759 (1008)
..++|++.+.||+|+||.||+|.+..+++.||+|++.... ....+.+.+|++++++++||||+++++++ ...+
T Consensus 20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~ 94 (287)
T 2wei_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEIL-----EDSS 94 (287)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEE-----ECSS
T ss_pred HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEE-----eCCC
Confidence 3468999999999999999999998899999999986432 33457899999999999999999999995 4566
Q ss_pred eEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCC---C
Q 045798 760 FKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDND---L 836 (1008)
Q Consensus 760 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~---~ 836 (1008)
..++||||+++++|.+++.... .+++.+++.++.||+.||+|||+. +|+||||||+||+++.+ +
T Consensus 95 ~~~lv~e~~~~~~L~~~l~~~~----------~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~ 161 (287)
T 2wei_A 95 SFYIVGELYTGGELFDEIIKRK----------RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDC 161 (287)
T ss_dssp EEEEEECCCCSCBHHHHHHHHS----------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTC
T ss_pred eEEEEEEccCCCCHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcc
Confidence 7999999999999999886543 689999999999999999999998 99999999999999754 4
Q ss_pred CeEEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHH
Q 045798 837 SGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNF 916 (1008)
Q Consensus 837 ~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~ 916 (1008)
.+||+|||.+......... ....+|+.|+|||.+.+ .++.++||||||+++|+|++|+.||......+ .....
T Consensus 162 ~~kL~Dfg~~~~~~~~~~~-----~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-~~~~~ 234 (287)
T 2wei_A 162 DIKIIDFGLSTCFQQNTKM-----KDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYD-ILKRV 234 (287)
T ss_dssp CEEECSTTGGGTBCCCSSC-----SCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHH
T ss_pred cEEEeccCcceeecCCCcc-----ccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHH-HHHHH
Confidence 7999999999865433221 22348999999999876 48999999999999999999999986431110 00000
Q ss_pred HHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 917 ARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 917 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
..... ....+.....+.++.+++.+||+.||++|||+.|+++
T Consensus 235 ~~~~~----------------------------~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 235 ETGKY----------------------------AFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp HHCCC----------------------------CCCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HcCCC----------------------------CCCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 00000 0000111123456899999999999999999999987
No 260
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=4.4e-36 Score=360.76 Aligned_cols=176 Identities=16% Similarity=0.205 Sum_probs=98.5
Q ss_pred CCCCCCCCCCCCCCCc----ccceEEcCCCCeEEEEeccccCCCCccCcCccCCccCCeeeecCCCCCCCCCccccCCCC
Q 045798 28 PQGILNSWNDSRHFCE----WEGITCGRRHRRVTALDLMSKSLSGSLSPHLGNLSFLREINLSNNTIQGEIPPEFGRLFR 103 (1008)
Q Consensus 28 ~~~~~~~w~~~~~~c~----w~gv~c~~~~~~v~~l~l~~~~l~~~l~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~ 103 (1008)
....+++|.++.+||. |.++.|. .++ +-...... ....-..+.+++.|++++|.++...+..|..+++
T Consensus 5 ~~~~l~~~~~~~~C~~~~~~~~c~~~~---~~i---~~~~~~~~--~~~~~l~l~~l~~l~l~~~~l~~lp~~~~~~l~~ 76 (597)
T 3oja_B 5 QRYNVKPRQPEYKCIDSNLQYDCVFYD---VHI---DMQTQDVY--FGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQ 76 (597)
T ss_dssp ------CCCSEECCCCC--CCSEEECS---CEE---CSSCCCCE--ESCSSGGGCCCSEEEESSCEESEECTHHHHHCCC
T ss_pred ccccccCCCCCCcCcccCcCceeEecC---cee---cccccccc--cCcccccCCCceEEEeeCCCCCCcCHHHHccCCC
Confidence 3445789998887774 5544442 111 11111111 1111223566777777777777555555666777
Q ss_pred CCEEEccCCCCCCccCcccccCcCcceEeeeccccccCCCccccccCCCCeeecccccCCCCCCCCCccccccchhhccc
Q 045798 104 LEALFLSNNSLVGKIPANLSYCSRLTVLCIEYNKLQGRIPLEFVSLSKLKDLSLAKNKLTGGIPPFLGNLTSLEVLSLAG 183 (1008)
Q Consensus 104 L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 183 (1008)
|++|+|++|.+++..|..|+.+++|++|+|++|.+++..|..|+++++|++|+|++|.+++..+..|+++++|++|+|++
T Consensus 77 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~ 156 (597)
T 3oja_B 77 VELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSN 156 (597)
T ss_dssp CSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeC
Confidence 77777777777766666667777777777776666666666666666666666666666644334445555555555555
Q ss_pred ccCCCCCCccccCCCCCcEEEecCCccc
Q 045798 184 NSFGRNIPDSLGQLKQLKILAIGGNNLS 211 (1008)
Q Consensus 184 n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 211 (1008)
|.+++..|..|+.+++|++|+|++|.++
T Consensus 157 N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 184 (597)
T 3oja_B 157 NNLERIEDDTFQATTSLQNLQLSSNRLT 184 (597)
T ss_dssp SCCCBCCTTTTTTCTTCCEEECTTSCCS
T ss_pred CcCCCCChhhhhcCCcCcEEECcCCCCC
Confidence 5555554545555555555555555444
No 261
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=1.3e-36 Score=341.30 Aligned_cols=277 Identities=21% Similarity=0.226 Sum_probs=198.2
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEecccc--chhhHHHHHHHHHHhhcCCCCceeeeeccccccc-cCCc
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQC--EGASKSFMAECKALKNIRHRNLVKVITSCSSIDF-QGND 759 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~~ 759 (1008)
.++|.+.+.||+|+||.||+|.+..+|+.||||++.... ....+.+.+|+.++++++||||+++++++..... ....
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 467999999999999999999999899999999997532 3345678999999999999999999998653221 1112
Q ss_pred eEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeE
Q 045798 760 FKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGH 839 (1008)
Q Consensus 760 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 839 (1008)
..++||||++ ++|.+++.. .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+|
T Consensus 103 ~~~lv~e~~~-~~l~~~~~~------------~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~k 166 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMGL------------KFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELK 166 (353)
T ss_dssp CCEEEEECCS-EEGGGTTTS------------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEE
T ss_pred eEEEEecccc-CCHHHHhcC------------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEE
Confidence 4599999995 688887742 588999999999999999999998 999999999999999999999
Q ss_pred EcccCcccccccccCccccccccccccccccCccccCC-CCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHH
Q 045798 840 IGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLG-SEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFAR 918 (1008)
Q Consensus 840 L~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~ 918 (1008)
|+|||.++..... .....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||......+ .......
T Consensus 167 l~Dfg~~~~~~~~-------~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~~~~i~~ 238 (353)
T 3coi_A 167 ILDFGLARHADAE-------MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQILK 238 (353)
T ss_dssp ECSTTCTTC---------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHH-HHHHHHH
T ss_pred EeecccccCCCCC-------ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHH
Confidence 9999999864332 123458999999999877 678999999999999999999999986432111 1111111
Q ss_pred hhCCcchhhhhcccccCchHHhhhhhhhh-hccccc-hhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 919 MALPNQVMDIVDPILRNDEEILASTDKCR-RMQTGI-NSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 919 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
.... ...++......... ........ ...... ......+.++.+++.+||+.||++|||++|+++
T Consensus 239 ~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 305 (353)
T 3coi_A 239 VTGV-PGTEFVQKLNDKAA--KSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 305 (353)
T ss_dssp HHCB-CCHHHHTTCSCHHH--HHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HhCC-CCHHHHHHHhhHHH--HHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 1100 00111110000000 00000000 000000 001134567899999999999999999999986
No 262
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=1.1e-36 Score=345.33 Aligned_cols=202 Identities=27% Similarity=0.298 Sum_probs=170.6
Q ss_pred HhcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhhcC-CC-----Cceeeeeccccccc
Q 045798 682 ATNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKNIR-HR-----NLVKVITSCSSIDF 755 (1008)
Q Consensus 682 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~~~~~~~~~~~ 755 (1008)
..++|++.+.||+|+||+||+|.+..+++.||||+++.. ......+.+|+++++.++ |+ +|+++++++
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~----- 125 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHF----- 125 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEE-----
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeee-----
Confidence 467899999999999999999999989999999999743 334567888999988884 55 488888884
Q ss_pred cCCceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeec--
Q 045798 756 QGNDFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLD-- 833 (1008)
Q Consensus 756 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~-- 833 (1008)
...+..++||||++ ++|.+++...... .+++..++.++.|++.||+|||++ ..+|+||||||+||+++
T Consensus 126 ~~~~~~~lv~e~~~-~~L~~~l~~~~~~--------~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~ 195 (382)
T 2vx3_A 126 MFRNHLCLVFEMLS-YNLYDLLRNTNFR--------GVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNP 195 (382)
T ss_dssp EETTEEEEEEECCC-CBHHHHHHHTTTS--------CCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESST
T ss_pred ccCCceEEEEecCC-CCHHHHHhhcCcC--------CCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecC
Confidence 45577999999995 6999999765321 589999999999999999999953 24999999999999995
Q ss_pred CCCCeEEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCcc
Q 045798 834 NDLSGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVM 906 (1008)
Q Consensus 834 ~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~ 906 (1008)
.++.+||+|||+|+..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 196 ~~~~~kL~DFG~a~~~~~~-------~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 196 KRSAIKIVDFGSSCQLGQR-------IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp TSCCEEECCCTTCEETTCC-------CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CCCcEEEEeccCceecccc-------cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 4788999999999865432 12345899999999999999999999999999999999999999743
No 263
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.6e-36 Score=353.66 Aligned_cols=320 Identities=19% Similarity=0.148 Sum_probs=208.2
Q ss_pred eeccccccccccCChhhhhcCCCCcEEEeccccCCCCCCcccccCCCCceeecccccccccccccccCCCcccccccccc
Q 045798 226 VFSVSHNQIHGSLPPSLGLLLPNLKFFQIHHNFFSGSIPISLSNASKLEHIEIANNNFSGKLSVNFGGMKNLSLLNLQFS 305 (1008)
Q Consensus 226 ~L~ls~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n 305 (1008)
.++.+++.++ .+|..+ .++++.|+|++|.+++..+..|.++++|++|+|++|.+.+..+..|.++++|+.|+|++|
T Consensus 15 ~v~c~~~~l~-~ip~~~---~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 90 (477)
T 2id5_A 15 AVLCHRKRFV-AVPEGI---PTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSN 90 (477)
T ss_dssp EEECCSCCCS-SCCSCC---CTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EEEeCCCCcC-cCCCCC---CCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCC
Confidence 4555555554 555543 246667777777776666667777777777777777777776777777777777777777
Q ss_pred cCCCCCCCcccccccccccCCCcEEEecCCcCCccCChhhhhhcccceeeeeccccccCCCCCccccccccceEEecCcc
Q 045798 306 NLGSGESDEMGFMNSLTNCSKLRVLSLGGNQFRGALPHSIANLSSQLQILILSSNQFYGSIPLGIGNLVDLYLLGMVENQ 385 (1008)
Q Consensus 306 ~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~ 385 (1008)
+++.+... .|.++++|++|+|++|++.+..|..+..+. +|++|+|++|.+++..|..|..+++|+.|++++|+
T Consensus 91 ~l~~~~~~------~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 163 (477)
T 2id5_A 91 RLKLIPLG------VFTGLSNLTKLDISENKIVILLDYMFQDLY-NLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCN 163 (477)
T ss_dssp CCCSCCTT------SSTTCTTCCEEECTTSCCCEECTTTTTTCT-TCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCC
T ss_pred cCCccCcc------cccCCCCCCEEECCCCccccCChhHccccc-cCCEEECCCCccceeChhhccCCCCCCEEECCCCc
Confidence 66654432 355677777777777777766666666665 47777777777776667777777788888888887
Q ss_pred ccCCcchhccCCCCCceEEccCCcccccccccccCCCCcceeeccccccccccCCCCcCCCcccEeecccccccCCcchh
Q 045798 386 FTGAIPKEMGKLQKLQGLDFSGNHFSGEIPSSLGNLSSLYEVFFNNNNLSGVIPFSLGNLKRLAFLEMSGNELSGTIPED 465 (1008)
Q Consensus 386 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~~ 465 (1008)
+++..+..|..+++|+.|+|++|.+.+..+..|..+++|+.|++++|.+.+.+|..+....+|+.|+|++|+++ .+|..
T Consensus 164 l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~-~~~~~ 242 (477)
T 2id5_A 164 LTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLT-AVPYL 242 (477)
T ss_dssp CSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCC-SCCHH
T ss_pred CcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCccc-ccCHH
Confidence 77766667777778888888888777666667777777777777777776666666666667777777777776 44443
Q ss_pred hhhhhhhhhhhcccCccccCCCcccccccccccccccccccccCCCCcccccccccceeeccCcccccchhhhhhccccc
Q 045798 466 IFNISYLSNSLNLARNHLVGIIPPRIGNLRALRSFDVSNNDLSGEIPIELGHCSSLEEIYLAGNLFHGSIPSFFNALKGV 545 (1008)
Q Consensus 466 ~~~~~~~~~~L~L~~N~l~~~~p~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 545 (1008)
.|..+++|+.|+|++|.+++..+..|..+++|++|+|++|++++..|..|..+++|
T Consensus 243 ------------------------~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 298 (477)
T 2id5_A 243 ------------------------AVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYL 298 (477)
T ss_dssp ------------------------HHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTC
T ss_pred ------------------------HhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccC
Confidence 34445555555555555554444445555555555555555555555555555555
Q ss_pred cEEecCCCcccccccCc-ccccccceeecccCccccc
Q 045798 546 QKIDLSRNNLSGQIPIF-LEALSLEYLNLSFNDFEGK 581 (1008)
Q Consensus 546 ~~L~ls~N~l~~~~p~~-~~~~~L~~L~l~~N~l~g~ 581 (1008)
+.|+|++|++++..+.. ..+.+|++|+|++|++.+.
T Consensus 299 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~ 335 (477)
T 2id5_A 299 RVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACD 335 (477)
T ss_dssp CEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECS
T ss_pred CEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCc
Confidence 55555555555444333 3344555555555555544
No 264
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=7.6e-37 Score=335.73 Aligned_cols=260 Identities=25% Similarity=0.328 Sum_probs=194.2
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhhcCCCCceeeeecccccc--------
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKNIRHRNLVKVITSCSSID-------- 754 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-------- 754 (1008)
.++|++.+.||+|+||.||+|++..+++.||||+++.. ....+.+.+|++++++++||||+++++++....
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA 83 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence 46799999999999999999999889999999999643 344578999999999999999999999865321
Q ss_pred ccCCceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecC
Q 045798 755 FQGNDFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDN 834 (1008)
Q Consensus 755 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~ 834 (1008)
.......++||||+++|+|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.
T Consensus 84 ~~~~~~~~lv~e~~~~~~L~~~l~~~~---------~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~ 151 (303)
T 1zy4_A 84 VKKKSTLFIQMEYCENGTLYDLIHSEN---------LNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDE 151 (303)
T ss_dssp --CEEEEEEEEECCCSCBHHHHHHHSC---------GGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECT
T ss_pred cccCCceEEEEecCCCCCHHHhhhccc---------cccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcC
Confidence 133567899999999999999997542 1678899999999999999999998 9999999999999999
Q ss_pred CCCeEEcccCcccccccccCc----------cccccccccccccccCccccCCC-CCCcccchhhHHHHHHHHHhCCCCC
Q 045798 835 DLSGHIGDFGLARFHQEVSNS----------TLSSSVGVKGTIGYTAPEYGLGS-EVSTNGDVYSYGILLLEMVTAKKPT 903 (1008)
Q Consensus 835 ~~~~kL~Dfg~a~~~~~~~~~----------~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltG~~pf 903 (1008)
++.+||+|||.+......... .........||+.|+|||++.+. .++.++|||||||++|||++ ||
T Consensus 152 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~ 228 (303)
T 1zy4_A 152 SRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PF 228 (303)
T ss_dssp TSCEEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CC
T ss_pred CCCEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---cc
Confidence 999999999999865432110 01112234589999999998764 68999999999999999998 54
Q ss_pred CccccCCccHHHHHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHH
Q 045798 904 DVMFEGDLNLHNFARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTN 983 (1008)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~e 983 (1008)
............. . .... .++.. .....+..+.+++.+||+.||.+|||++|
T Consensus 229 ~~~~~~~~~~~~~-~-----------~~~~--------------~~~~~--~~~~~~~~~~~li~~~l~~dp~~Rps~~~ 280 (303)
T 1zy4_A 229 STGMERVNILKKL-R-----------SVSI--------------EFPPD--FDDNKMKVEKKIIRLLIDHDPNKRPGART 280 (303)
T ss_dssp SSHHHHHHHHHHH-H-----------STTC--------------CCCTT--CCTTTSHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred CCchhHHHHHHhc-c-----------cccc--------------ccCcc--ccccchHHHHHHHHHHHhcCcccCcCHHH
Confidence 3211100000000 0 0000 00000 01123456789999999999999999999
Q ss_pred HHH
Q 045798 984 VVH 986 (1008)
Q Consensus 984 vl~ 986 (1008)
+++
T Consensus 281 ll~ 283 (303)
T 1zy4_A 281 LLN 283 (303)
T ss_dssp HHH
T ss_pred HhC
Confidence 987
No 265
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=2e-36 Score=340.55 Aligned_cols=278 Identities=20% Similarity=0.295 Sum_probs=202.1
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCC-eEEEEEEeccccchhhHHHHHHHHHHhhcCCCC------ceeeeeccccccc
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDG-IVVAIKVINLQCEGASKSFMAECKALKNIRHRN------LVKVITSCSSIDF 755 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~~~~~~~~~~~ 755 (1008)
.++|++.+.||+|+||.||+|.+..++ +.||+|+++.. ....+.+.+|++++++++|++ ++.++++ +
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~-----~ 91 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDW-----F 91 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEE-----E
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeee-----e
Confidence 468999999999999999999997666 79999999744 344567889999999997665 8888887 3
Q ss_pred cCCceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeee---
Q 045798 756 QGNDFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILL--- 832 (1008)
Q Consensus 756 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll--- 832 (1008)
...+..++||||+ ++++.+++...... .+++.+++.++.||+.||+|||+. +|+||||||+||++
T Consensus 92 ~~~~~~~lv~e~~-~~~l~~~l~~~~~~--------~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~ 159 (355)
T 2eu9_A 92 NFHGHMCIAFELL-GKNTFEFLKENNFQ--------PYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNS 159 (355)
T ss_dssp EETTEEEEEEECC-CCBHHHHHHHTTTC--------CCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCC
T ss_pred eeCCeEEEEEecc-CCChHHHHHhccCC--------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecc
Confidence 5566799999999 77787777654321 689999999999999999999997 99999999999999
Q ss_pred ----------------cCCCCeEEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHH
Q 045798 833 ----------------DNDLSGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEM 896 (1008)
Q Consensus 833 ----------------~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~el 896 (1008)
+.++.+||+|||.++...... ....||+.|+|||++.+..++.++|||||||++|||
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~-------~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el 232 (355)
T 2eu9_A 160 EFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHH-------TTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEY 232 (355)
T ss_dssp CEEEEECCC-CCCEEEESCCCEEECCCTTCEETTSCC-------CSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccCCCcEEEeecCccccccccc-------cCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHH
Confidence 567899999999998543321 234589999999999999999999999999999999
Q ss_pred HhCCCCCCccccCCccHHHHHHh--hCCcchhhhhcc---------cccC-chHHhhhhhhhhhccccchhHHHHHHHHH
Q 045798 897 VTAKKPTDVMFEGDLNLHNFARM--ALPNQVMDIVDP---------ILRN-DEEILASTDKCRRMQTGINSRLECLISMV 964 (1008)
Q Consensus 897 ltG~~pf~~~~~~~~~~~~~~~~--~~~~~~~~~~d~---------~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 964 (1008)
++|+.||......+ ........ ..+......... .... ..........+.............+.++.
T Consensus 233 ~~g~~pf~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 311 (355)
T 2eu9_A 233 YRGFTLFQTHENRE-HLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLF 311 (355)
T ss_dssp HHSSCSCCCSSHHH-HHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHH
T ss_pred HhCCCCCCCCCHHH-HHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHH
Confidence 99999997432211 11111111 111111000000 0000 00000011111111111122234567899
Q ss_pred HHHhcccCcCCCCCCCHHHHHH
Q 045798 965 KIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 965 ~li~~cl~~dP~~RPt~~evl~ 986 (1008)
+++.+||+.||++|||++|+++
T Consensus 312 ~li~~~L~~dP~~Rpt~~e~l~ 333 (355)
T 2eu9_A 312 DLMRRMLEFDPAQRITLAEALL 333 (355)
T ss_dssp HHHHHHTCSSTTTSCCHHHHTT
T ss_pred HHHHHHhcCChhhCcCHHHHhc
Confidence 9999999999999999999985
No 266
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=4e-37 Score=352.55 Aligned_cols=279 Identities=21% Similarity=0.250 Sum_probs=195.8
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhhcCCCCceeeeeccccccc-cCCceE
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKNIRHRNLVKVITSCSSIDF-QGNDFK 761 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~~~~ 761 (1008)
..+|++.+.||+|+||.||+|++..+++.||||++.... ....+|++++++++||||+++++++..... .+..+.
T Consensus 53 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~ 128 (420)
T 1j1b_A 53 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYL 128 (420)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEE
T ss_pred cceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeE
Confidence 346899999999999999999998899999999986432 224579999999999999999998754322 233456
Q ss_pred EEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCC-CCeEE
Q 045798 762 AIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDND-LSGHI 840 (1008)
Q Consensus 762 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~kL 840 (1008)
++||||+++ ++.+++...... ...+++..++.++.||+.||+|||+. +|+||||||+|||++.+ +.+||
T Consensus 129 ~lv~e~~~~-~l~~~~~~~~~~------~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl 198 (420)
T 1j1b_A 129 NLVLDYVPE-TVYRVARHYSRA------KQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKL 198 (420)
T ss_dssp EEEEECCCE-EHHHHHHHHHHT------TCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEE
T ss_pred Eeehhcccc-cHHHHHHHHhhc------cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEe
Confidence 799999964 666655421100 11689999999999999999999997 99999999999999965 56899
Q ss_pred cccCcccccccccCccccccccccccccccCccccCCC-CCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHHh
Q 045798 841 GDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGS-EVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFARM 919 (1008)
Q Consensus 841 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~~ 919 (1008)
+|||+++....... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||...... ..+......
T Consensus 199 ~DFG~a~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~-~~l~~i~~~ 272 (420)
T 1j1b_A 199 CDFGSAKQLVRGEP-----NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV-DQLVEIIKV 272 (420)
T ss_dssp CCCTTCEECCTTCC-----CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHH
T ss_pred ccchhhhhcccCCC-----ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHH
Confidence 99999986543322 1234689999999998765 7899999999999999999999998743221 112222221
Q ss_pred hCCcchhhh--hcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 920 ALPNQVMDI--VDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 920 ~~~~~~~~~--~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
........+ ..+...... .......++........+.++.+++.+||+.||++|||+.|+++
T Consensus 273 lg~p~~~~~~~~~~~~~~~~-----~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~ 336 (420)
T 1j1b_A 273 LGTPTREQIREMNPNYTEFK-----FPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 336 (420)
T ss_dssp HCSCCHHHHHHHCSCCCCCC-----CCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hCCCCHHHHHhhChhhhhhc-----cCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence 111111000 011000000 00000000000000123466899999999999999999999985
No 267
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=8.9e-36 Score=349.21 Aligned_cols=315 Identities=21% Similarity=0.234 Sum_probs=195.8
Q ss_pred cccCCCCccCcCccCCccCCeeeecCCCCCCCCCccccCCCCCCEEEccCCCCCCccCcccccCcCcceEeeeccccccC
Q 045798 62 MSKSLSGSLSPHLGNLSFLREINLSNNTIQGEIPPEFGRLFRLEALFLSNNSLVGKIPANLSYCSRLTVLCIEYNKLQGR 141 (1008)
Q Consensus 62 ~~~~l~~~l~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~ 141 (1008)
.+++++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|.+++..|..|+++++|++|+|++|++++.
T Consensus 19 ~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~ 95 (477)
T 2id5_A 19 HRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLI 95 (477)
T ss_dssp CSCCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSC
T ss_pred CCCCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCcc
Confidence 344555 4565543 4678888888888877777788888888888888887776677777777777777777777755
Q ss_pred CCccccccCCCCeeecccccCCCCCCCCCccccccchhhcccccCCCCCCccccCCCCCcEEEecCCcccccCCccccCC
Q 045798 142 IPLEFVSLSKLKDLSLAKNKLTGGIPPFLGNLTSLEVLSLAGNSFGRNIPDSLGQLKQLKILAIGGNNLSGPIPPSIYNL 221 (1008)
Q Consensus 142 ~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 221 (1008)
.+..|.++++|++|+|++|++++..+..|.++++|++|+|++|.+.+..+..|..+++|+.|++++|.+++..+..|.++
T Consensus 96 ~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l 175 (477)
T 2id5_A 96 PLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHL 175 (477)
T ss_dssp CTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTC
T ss_pred CcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhccc
Confidence 55566677777777777777766656666666666666666666655555556666666666666665554433444444
Q ss_pred CCcceeccccccccccCChhhhhcCCCCcEEEeccccCCCCCCcccccCCCCceeecccccccccccccccCCCcccccc
Q 045798 222 SFLVVFSVSHNQIHGSLPPSLGLLLPNLKFFQIHHNFFSGSIPISLSNASKLEHIEIANNNFSGKLSVNFGGMKNLSLLN 301 (1008)
Q Consensus 222 ~~L~~L~ls~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 301 (1008)
+ +|+.|+|++|.+.+..+..+..+++|++|++++|.+.+..+..+..
T Consensus 176 ~-------------------------~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~-------- 222 (477)
T 2id5_A 176 H-------------------------GLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLY-------- 222 (477)
T ss_dssp T-------------------------TCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTT--------
T ss_pred C-------------------------CCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCccccc--------
Confidence 4 4444444444444444445555666666666665544333322211
Q ss_pred cccccCCCCCCCcccccccccccCCCcEEEecCCcCCccCC-hhhhhhcccceeeeeccccccCCCCCccccccccceEE
Q 045798 302 LQFSNLGSGESDEMGFMNSLTNCSKLRVLSLGGNQFRGALP-HSIANLSSQLQILILSSNQFYGSIPLGIGNLVDLYLLG 380 (1008)
Q Consensus 302 L~~n~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 380 (1008)
..+|+.|++++|+++ .+| ..+..+. +|++|+|++|.+++..+..+..+++|+.|+
T Consensus 223 ----------------------~~~L~~L~l~~n~l~-~~~~~~~~~l~-~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 278 (477)
T 2id5_A 223 ----------------------GLNLTSLSITHCNLT-AVPYLAVRHLV-YLRFLNLSYNPISTIEGSMLHELLRLQEIQ 278 (477)
T ss_dssp ----------------------TCCCSEEEEESSCCC-SCCHHHHTTCT-TCCEEECCSSCCCEECTTSCTTCTTCCEEE
T ss_pred ----------------------CccccEEECcCCccc-ccCHHHhcCcc-ccCeeECCCCcCCccChhhccccccCCEEE
Confidence 124555555555555 233 3344443 466666666666655555566666666666
Q ss_pred ecCccccCCcchhccCCCCCceEEccCCcccccccccccCCCCcceeecccccccc
Q 045798 381 MVENQFTGAIPKEMGKLQKLQGLDFSGNHFSGEIPSSLGNLSSLYEVFFNNNNLSG 436 (1008)
Q Consensus 381 L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 436 (1008)
|++|++++..|..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|.+..
T Consensus 279 L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c 334 (477)
T 2id5_A 279 LVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLAC 334 (477)
T ss_dssp CCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEEC
T ss_pred CCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccC
Confidence 66666666666666667777777777777765555566666777777777776653
No 268
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=4.8e-37 Score=349.02 Aligned_cols=278 Identities=22% Similarity=0.246 Sum_probs=192.6
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhhcCCCCceeeeeccccccc-cCCceE
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKNIRHRNLVKVITSCSSIDF-QGNDFK 761 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~~~~ 761 (1008)
..+|++.+.||+|+||.||+|++..+++ ||+|++..... ...+|+++++.++||||+++++++..... .+..+.
T Consensus 39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~ 113 (394)
T 4e7w_A 39 EIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFL 113 (394)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTTEE-EEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEE
T ss_pred cceEEEeEEEeeCCCeEEEEEEECCCCe-EEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEE
Confidence 3579999999999999999999975554 88887753322 23479999999999999999999754332 344457
Q ss_pred EEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeec-CCCCeEE
Q 045798 762 AIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLD-NDLSGHI 840 (1008)
Q Consensus 762 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~-~~~~~kL 840 (1008)
++||||++++.+......... ...+++..++.++.||+.||+|||+. +|+||||||+||+++ .++.+||
T Consensus 114 ~lv~e~~~~~l~~~~~~~~~~-------~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL 183 (394)
T 4e7w_A 114 NLVLEYVPETVYRASRHYAKL-------KQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKL 183 (394)
T ss_dssp EEEEECCSEEHHHHHHHHHHT-------TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEE
T ss_pred EEEeeccCccHHHHHHHHHhh-------cCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEE
Confidence 899999976433332211110 11689999999999999999999998 999999999999999 7999999
Q ss_pred cccCcccccccccCccccccccccccccccCccccCCC-CCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHHh
Q 045798 841 GDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGS-EVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFARM 919 (1008)
Q Consensus 841 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~~ 919 (1008)
+|||+|+....... .....||+.|+|||++.+. .++.++||||+||++|||++|+.||......+ ........
T Consensus 184 ~DFG~a~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~-~l~~i~~~ 257 (394)
T 4e7w_A 184 IDFGSAKILIAGEP-----NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGID-QLVEIIKV 257 (394)
T ss_dssp CCCTTCEECCTTCC-----CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHH
T ss_pred eeCCCcccccCCCC-----CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHH
Confidence 99999986543322 1234589999999998765 58999999999999999999999987432211 11122211
Q ss_pred hCCcchh--hhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 920 ALPNQVM--DIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 920 ~~~~~~~--~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
....... ....+...... .......+.........+.++.+++.+||+.||.+|||+.|+++
T Consensus 258 ~g~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 321 (394)
T 4e7w_A 258 LGTPSREQIKTMNPNYMEHK-----FPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC 321 (394)
T ss_dssp HCCCCHHHHHHHCGGGSSSC-----CCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred hCCCCHHHHHhhChhhhhhc-----cccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhc
Confidence 1111100 00000000000 00000000000001124567899999999999999999999986
No 269
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=1e-36 Score=366.75 Aligned_cols=260 Identities=23% Similarity=0.348 Sum_probs=204.1
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcC---CCeEEEEEEecccc-chhhHHHHHHHHHHhhcCCCCceeeeeccccccccCC
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDE---DGIVVAIKVINLQC-EGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGN 758 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 758 (1008)
.++|++.+.||+|+||.||+|.+.. .+..||+|+++... ....+.+.+|+.++++++||||+++++++. +
T Consensus 389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~------~ 462 (656)
T 2j0j_A 389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT------E 462 (656)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC------S
T ss_pred cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe------c
Confidence 4678899999999999999999853 35689999987543 344578999999999999999999999852 2
Q ss_pred ceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCe
Q 045798 759 DFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSG 838 (1008)
Q Consensus 759 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 838 (1008)
+..++||||+++|+|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 463 ~~~~lv~E~~~~g~L~~~l~~~~~---------~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~v 530 (656)
T 2j0j_A 463 NPVWIIMELCTLGELRSFLQVRKF---------SLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCV 530 (656)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTTT---------TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEE
T ss_pred CceEEEEEcCCCCcHHHHHHhccC---------CCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCE
Confidence 457999999999999999975431 689999999999999999999998 99999999999999999999
Q ss_pred EEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHh-CCCCCCccccCCccHHHHH
Q 045798 839 HIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVT-AKKPTDVMFEGDLNLHNFA 917 (1008)
Q Consensus 839 kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-G~~pf~~~~~~~~~~~~~~ 917 (1008)
||+|||+++......... .....+|+.|+|||++.+..++.++|||||||++|||++ |..||......+ .....
T Consensus 531 kL~DFG~a~~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~--~~~~i 605 (656)
T 2j0j_A 531 KLGDFGLSRYMEDSTYYK---ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND--VIGRI 605 (656)
T ss_dssp EECCCCCCCSCCC-------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--HHHHH
T ss_pred EEEecCCCeecCCCccee---ccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHH--HHHHH
Confidence 999999998664432211 222347789999999988899999999999999999997 999986432110 00000
Q ss_pred HhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHHHHHHHHHH
Q 045798 918 RMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHELQSVKNIL 995 (1008)
Q Consensus 918 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~i~~~~ 995 (1008)
.... .. . ....++..+.+++.+||+.||++|||+.|+++.|+++.+..
T Consensus 606 ~~~~--------------------------~~--~--~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~~ 653 (656)
T 2j0j_A 606 ENGE--------------------------RL--P--MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 653 (656)
T ss_dssp HHTC--------------------------CC--C--CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HcCC--------------------------CC--C--CCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHh
Confidence 0000 00 0 00123456899999999999999999999999999987653
No 270
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=8.1e-37 Score=359.34 Aligned_cols=278 Identities=22% Similarity=0.243 Sum_probs=201.7
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccc-cchhhHHHHHHHHHHhhcCCCCceeeeecccccc-ccCCce
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQ-CEGASKSFMAECKALKNIRHRNLVKVITSCSSID-FQGNDF 760 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~~~~ 760 (1008)
.++|++.+.||+|+||.||+|.+..+|+.||||+++.. .....+.+.+|++++++++||||+++++++.... +..++.
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 47899999999999999999999889999999998754 3344677999999999999999999999965422 233677
Q ss_pred EEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCC---
Q 045798 761 KAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLS--- 837 (1008)
Q Consensus 761 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~--- 837 (1008)
.++||||+++|+|.+++....... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~~~~-------~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~ 162 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFENCC-------GLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLI 162 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSSCTT-------CCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCE
T ss_pred EEEEEEeCCCCCHHHHHHhcccCC-------CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCcee
Confidence 899999999999999997654221 578889999999999999999998 9999999999999997765
Q ss_pred eEEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHH
Q 045798 838 GHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFA 917 (1008)
Q Consensus 838 ~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~ 917 (1008)
+||+|||.+........ .....||+.|+|||++.+..++.++|||||||++|+|++|..||..... ...|.
T Consensus 163 vKL~DFG~a~~~~~~~~-----~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~----~~~~~ 233 (676)
T 3qa8_A 163 HKIIDLGYAKELDQGEL-----CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQ----PVQWH 233 (676)
T ss_dssp EEECSCCCCCBTTSCCC-----CCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCH----HHHSS
T ss_pred EEEcccccccccccccc-----cccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccc----hhhhh
Confidence 89999999986644322 1234689999999999999999999999999999999999999864211 01111
Q ss_pred HhhCCcchh-hhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHH
Q 045798 918 RMALPNQVM-DIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVV 985 (1008)
Q Consensus 918 ~~~~~~~~~-~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl 985 (1008)
......... ........... ......+.+.......+..+.+++.+||+.||++|||++|++
T Consensus 234 ~~i~~~~~~~~~~~~~l~g~~------~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL 296 (676)
T 3qa8_A 234 GKVREKSNEHIVVYDDLTGAV------KFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNP 296 (676)
T ss_dssp TTCC------CCSCCCCSSSC------CCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCC
T ss_pred hhhhcccchhhhhhhhhcccc------ccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHh
Confidence 000000000 00000000000 000011111111224567889999999999999999998843
No 271
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.3e-36 Score=347.62 Aligned_cols=212 Identities=26% Similarity=0.361 Sum_probs=157.1
Q ss_pred cCCCC-CceEeeccCeeEEEEEEc--CCCeEEEEEEeccccchhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCce
Q 045798 684 NGFSS-THLIGVGSFGCVYKGALD--EDGIVVAIKVINLQCEGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDF 760 (1008)
Q Consensus 684 ~~y~~-~~~lg~G~~g~Vy~~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 760 (1008)
+.|.+ .++||+|+||.||+|++. .+++.||||++... .....+.+|++++++++||||+++++++.. ..+..
T Consensus 20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~---~~~~~ 94 (405)
T 3rgf_A 20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGT--GISMSACREIALLRELKHPNVISLQKVFLS---HADRK 94 (405)
T ss_dssp HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSS--SCCHHHHHHHHHHHHCCCTTBCCCCEEEEE---TTTTE
T ss_pred hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCC--CCCHHHHHHHHHHHhcCCCCeeeEeeEEec---CCCCe
Confidence 34665 458999999999999975 46889999999743 234578899999999999999999999642 45667
Q ss_pred EEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeee----cCCC
Q 045798 761 KAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILL----DNDL 836 (1008)
Q Consensus 761 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll----~~~~ 836 (1008)
.++||||++ ++|.+++........ ......+++..++.|+.||+.||+|||+. +|+||||||+|||+ +.++
T Consensus 95 ~~lv~e~~~-~~l~~~~~~~~~~~~-~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~ 169 (405)
T 3rgf_A 95 VWLLFDYAE-HDLWHIIKFHRASKA-NKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERG 169 (405)
T ss_dssp EEEEEECCS-EEHHHHHHHHHHHC--------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTT
T ss_pred EEEEEeCCC-CCHHHHHHHhccccc-cccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCC
Confidence 999999995 688888753221000 00112589999999999999999999998 99999999999999 6789
Q ss_pred CeEEcccCcccccccccCccccccccccccccccCccccCCC-CCCcccchhhHHHHHHHHHhCCCCCCcc
Q 045798 837 SGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGS-EVSTNGDVYSYGILLLEMVTAKKPTDVM 906 (1008)
Q Consensus 837 ~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltG~~pf~~~ 906 (1008)
.+||+|||+|+........ ........||+.|+|||++.+. .++.++|||||||++|||++|+.||...
T Consensus 170 ~~kl~Dfg~a~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 239 (405)
T 3rgf_A 170 RVKIADMGFARLFNSPLKP-LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 239 (405)
T ss_dssp CEEECCTTCCC-----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCC
T ss_pred cEEEEECCCceecCCCCcc-cccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCc
Confidence 9999999999876543211 1122345689999999998874 5899999999999999999999999653
No 272
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=9.8e-36 Score=339.02 Aligned_cols=350 Identities=17% Similarity=0.177 Sum_probs=226.4
Q ss_pred CCCCCCCCCCCc-ccceEEcCCCCeEEEEeccccCCCCccCcCccCCccCCeeeecCCCCCCCCCccccCCCCCCEEEcc
Q 045798 32 LNSWNDSRHFCE-WEGITCGRRHRRVTALDLMSKSLSGSLSPHLGNLSFLREINLSNNTIQGEIPPEFGRLFRLEALFLS 110 (1008)
Q Consensus 32 ~~~w~~~~~~c~-w~gv~c~~~~~~v~~l~l~~~~l~~~l~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls 110 (1008)
+++|..+.+||. |.+..|.....++ ............-..+.+|++|++++|.++...+..|..+++|++|+|+
T Consensus 3 ~~~~~~~~~C~~~~~~~~c~~~~~~i-----~~~~~~~~~~~~~~~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~ 77 (390)
T 3o6n_A 3 VKPRQPEYKCIDSNLQYDCVFYDVHI-----DMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLN 77 (390)
T ss_dssp ----CCEECBCC------EEEESCEE-----CSSCCCCEESCSSGGGCCCSEEEEESCEESEECTHHHHHCCCCSEEECT
T ss_pred cCCCCCccceehhhhhhccceeeeee-----ecccccccccccccccCCceEEEecCCchhhCChhHhcccccCcEEECC
Confidence 578988777764 6666664322222 1111111222233456788999999988885555557888889999999
Q ss_pred CCCCCCccCcccccCcCcceEeeeccccccCCCccccccCCCCeeecccccCCCCCCCCCccccccchhhcccccCCCCC
Q 045798 111 NNSLVGKIPANLSYCSRLTVLCIEYNKLQGRIPLEFVSLSKLKDLSLAKNKLTGGIPPFLGNLTSLEVLSLAGNSFGRNI 190 (1008)
Q Consensus 111 ~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 190 (1008)
+|.+++..+..|+.+++|++|+|++|.+++..|..|.++++|++|+|++|+++...+..|+++++|++|++++|++.+..
T Consensus 78 ~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~ 157 (390)
T 3o6n_A 78 DLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIE 157 (390)
T ss_dssp TSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCC
T ss_pred CCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCccC
Confidence 98888777778888888888888888888777777888888888888888888444444677888888888888887777
Q ss_pred CccccCCCCCcEEEecCCcccccCCccccCCCCcceeccccccccccCChhhhhcCCCCcEEEeccccCCCCCCcccccC
Q 045798 191 PDSLGQLKQLKILAIGGNNLSGPIPPSIYNLSFLVVFSVSHNQIHGSLPPSLGLLLPNLKFFQIHHNFFSGSIPISLSNA 270 (1008)
Q Consensus 191 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l 270 (1008)
+..|..+++|++|++++|.+++. .+..+++|+.|++++|.+.+ +...
T Consensus 158 ~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~~------------------------------~~~~ 204 (390)
T 3o6n_A 158 DDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLST------------------------------LAIP 204 (390)
T ss_dssp TTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCSE------------------------------EECC
T ss_pred hhhccCCCCCCEEECCCCcCCcc---ccccccccceeecccccccc------------------------------cCCC
Confidence 77777777777777777777643 23444555555555555441 1122
Q ss_pred CCCceeecccccccccccccccCCCcccccccccccCCCCCCCcccccccccccCCCcEEEecCCcCCccCChhhhhhcc
Q 045798 271 SKLEHIEIANNNFSGKLSVNFGGMKNLSLLNLQFSNLGSGESDEMGFMNSLTNCSKLRVLSLGGNQFRGALPHSIANLSS 350 (1008)
Q Consensus 271 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 350 (1008)
++|++|++++|.+...... ..++|+.|++++|++++. ..+..+.
T Consensus 205 ~~L~~L~l~~n~l~~~~~~---------------------------------~~~~L~~L~l~~n~l~~~--~~l~~l~- 248 (390)
T 3o6n_A 205 IAVEELDASHNSINVVRGP---------------------------------VNVELTILKLQHNNLTDT--AWLLNYP- 248 (390)
T ss_dssp SSCSEEECCSSCCCEEECC---------------------------------CCSSCCEEECCSSCCCCC--GGGGGCT-
T ss_pred CcceEEECCCCeeeecccc---------------------------------ccccccEEECCCCCCccc--HHHcCCC-
Confidence 3455555555555433111 113444555555555421 2344443
Q ss_pred cceeeeeccccccCCCCCccccccccceEEecCccccCCcchhccCCCCCceEEccCCcccccccccccCCCCcceeecc
Q 045798 351 QLQILILSSNQFYGSIPLGIGNLVDLYLLGMVENQFTGAIPKEMGKLQKLQGLDFSGNHFSGEIPSSLGNLSSLYEVFFN 430 (1008)
Q Consensus 351 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 430 (1008)
+|++|+|++|.+++..|..+..+++|+.|+|++|++++ +|..+..+++|+.|+|++|+++ .+|..+..+++|+.|+++
T Consensus 249 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~ 326 (390)
T 3o6n_A 249 GLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLD 326 (390)
T ss_dssp TCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECC
T ss_pred CccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECC
Confidence 36666666666665556666667777777777777764 4555667778888888888887 566667778888888888
Q ss_pred ccccccccCCCCcCCCcccEeecccccccC
Q 045798 431 NNNLSGVIPFSLGNLKRLAFLEMSGNELSG 460 (1008)
Q Consensus 431 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 460 (1008)
+|.++.. | +..+++|+.|++++|.+++
T Consensus 327 ~N~i~~~-~--~~~~~~L~~L~l~~N~~~~ 353 (390)
T 3o6n_A 327 HNSIVTL-K--LSTHHTLKNLTLSHNDWDC 353 (390)
T ss_dssp SSCCCCC-C--CCTTCCCSEEECCSSCEEH
T ss_pred CCcccee-C--chhhccCCEEEcCCCCccc
Confidence 8888743 3 6778888999999998874
No 273
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=1.2e-36 Score=338.34 Aligned_cols=257 Identities=19% Similarity=0.222 Sum_probs=175.2
Q ss_pred hcCCCCCc-eEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCceE
Q 045798 683 TNGFSSTH-LIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDFK 761 (1008)
Q Consensus 683 ~~~y~~~~-~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 761 (1008)
.++|.+.+ .||+|+||.||+|.+..+++.||||++... . ....+....++.++||||+++++++.... ..+...
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~---~~~~e~~~~~~~~~h~~i~~~~~~~~~~~-~~~~~~ 101 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS-P---KARQEVDHHWQASGGPHIVCILDVYENMH-HGKRCL 101 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS-H---HHHHHHHHHHHHTTSTTBCCEEEEEEEEE-TTEEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc-H---HHHHHHHHHHHhcCCCChHHHHHHHhhcc-CCCceE
Confidence 57899855 699999999999999989999999998643 1 12222333456679999999999865321 235568
Q ss_pred EEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecC---CCCe
Q 045798 762 AIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDN---DLSG 838 (1008)
Q Consensus 762 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~ 838 (1008)
++||||+++|+|.+++...... .+++.+++.++.||+.||+|||+. +|+||||||+||+++. ++.+
T Consensus 102 ~lv~e~~~gg~L~~~l~~~~~~--------~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~ 170 (336)
T 3fhr_A 102 LIIMECMEGGELFSRIQERGDQ--------AFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVL 170 (336)
T ss_dssp EEEEECCTTEEHHHHHHTC-CC--------CCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCE
T ss_pred EEEEeccCCCCHHHHHHhcCCC--------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceE
Confidence 9999999999999999865421 689999999999999999999998 9999999999999976 4559
Q ss_pred EEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHH
Q 045798 839 HIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFAR 918 (1008)
Q Consensus 839 kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~ 918 (1008)
||+|||+++...... .....+|+.|+|||++.+..++.++|||||||++|+|++|+.||...............
T Consensus 171 kl~Dfg~~~~~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~ 244 (336)
T 3fhr_A 171 KLTDFGFAKETTQNA------LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRR 244 (336)
T ss_dssp EECCCTTCEEC----------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------
T ss_pred EEeccccceeccccc------cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHh
Confidence 999999998654322 12245899999999998889999999999999999999999998643221110000000
Q ss_pred hhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 919 MALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 919 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
. .... .....+.....+.++.+++.+||+.||.+|||++|+++
T Consensus 245 --~-------~~~~----------------~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 287 (336)
T 3fhr_A 245 --I-------RLGQ----------------YGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMN 287 (336)
T ss_dssp -------------------------------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred --h-------hccc----------------cccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 0 0000 00000001124556899999999999999999999987
No 274
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=4.3e-37 Score=339.19 Aligned_cols=263 Identities=24% Similarity=0.341 Sum_probs=196.0
Q ss_pred CCCCHHHHHHHhcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEecccc--chhhHHHHHHHHHHhhcC--CCCceeee
Q 045798 672 PKMSYKSLLKATNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQC--EGASKSFMAECKALKNIR--HRNLVKVI 747 (1008)
Q Consensus 672 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~--h~niv~~~ 747 (1008)
..+.++.+....++|++.+.||+|+||.||+|.+. +++.||||++.... ....+.+.+|++++++++ ||||++++
T Consensus 16 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~ 94 (313)
T 3cek_A 16 ENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 94 (313)
T ss_dssp ----CCEEEETTEEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEE
T ss_pred CCCCeeeeeeccceEEEEEEecCCCCEEEEEEEcC-CCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEE
Confidence 34444445555678999999999999999999985 68999999997442 344578999999999996 59999999
Q ss_pred eccccccccCCceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCC
Q 045798 748 TSCSSIDFQGNDFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKP 827 (1008)
Q Consensus 748 ~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp 827 (1008)
+++ ..++..++||| +.+++|.+++.... .+++..++.++.|++.||+|||+. +|+||||||
T Consensus 95 ~~~-----~~~~~~~lv~e-~~~~~L~~~l~~~~----------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp 155 (313)
T 3cek_A 95 DYE-----ITDQYIYMVME-CGNIDLNSWLKKKK----------SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKP 155 (313)
T ss_dssp EEE-----ECSSEEEEEEC-CCSEEHHHHHHHCS----------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCG
T ss_pred EEe-----ecCCEEEEEEe-cCCCcHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCc
Confidence 985 45667999999 55889999997654 689999999999999999999998 999999999
Q ss_pred CCeeecCCCCeEEcccCcccccccccCccccccccccccccccCccccCC-----------CCCCcccchhhHHHHHHHH
Q 045798 828 SNILLDNDLSGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLG-----------SEVSTNGDVYSYGILLLEM 896 (1008)
Q Consensus 828 ~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~sDvwslG~vl~el 896 (1008)
+||++++ +.+||+|||++.......... ......||+.|+|||++.+ ..++.++|||||||++|||
T Consensus 156 ~NIl~~~-~~~kL~Dfg~~~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el 232 (313)
T 3cek_A 156 ANFLIVD-GMLKLIDFGIANQMQPDTTSV--VKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYM 232 (313)
T ss_dssp GGEEEET-TEEEECCCSSSCC----------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHH
T ss_pred ccEEEEC-CeEEEeeccccccccCccccc--cccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHH
Confidence 9999965 799999999998664432211 1223458999999999875 4688899999999999999
Q ss_pred HhCCCCCCccccCCccHHHHHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCC
Q 045798 897 VTAKKPTDVMFEGDLNLHNFARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQ 976 (1008)
Q Consensus 897 ltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~ 976 (1008)
++|+.||........... ...++.... .++ ...+.++.+++.+||+.||.
T Consensus 233 ~~g~~pf~~~~~~~~~~~------------~~~~~~~~~------------~~~------~~~~~~l~~li~~~l~~dp~ 282 (313)
T 3cek_A 233 TYGKTPFQQIINQISKLH------------AIIDPNHEI------------EFP------DIPEKDLQDVLKCCLKRDPK 282 (313)
T ss_dssp HHSSCTTTTCCSHHHHHH------------HHHCTTSCC------------CCC------CCSCHHHHHHHHHHTCSSTT
T ss_pred HhCCCchhhHHHHHHHHH------------HHHhccccc------------CCc------ccchHHHHHHHHHHccCCcc
Confidence 999999864322111111 111110000 000 01234578999999999999
Q ss_pred CCCCHHHHHHH
Q 045798 977 DRMNMTNVVHE 987 (1008)
Q Consensus 977 ~RPt~~evl~~ 987 (1008)
+|||++|+++.
T Consensus 283 ~Rps~~ell~h 293 (313)
T 3cek_A 283 QRISIPELLAH 293 (313)
T ss_dssp TSCCHHHHHTS
T ss_pred cCcCHHHHhcC
Confidence 99999999874
No 275
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=7.6e-37 Score=337.08 Aligned_cols=246 Identities=22% Similarity=0.298 Sum_probs=191.2
Q ss_pred HHHHHhcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccc------hhhHHHHHHHHHHhhc----CCCCceeee
Q 045798 678 SLLKATNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCE------GASKSFMAECKALKNI----RHRNLVKVI 747 (1008)
Q Consensus 678 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l----~h~niv~~~ 747 (1008)
+.....++|++.+.||+|+||.||+|.+..+++.||||+++.... .....+.+|+.++.++ +||||++++
T Consensus 25 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~ 104 (312)
T 2iwi_A 25 DREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLL 104 (312)
T ss_dssp --------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEE
T ss_pred chhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEE
Confidence 344456789999999999999999999988999999999975432 1234567799999998 899999999
Q ss_pred eccccccccCCceEEEEEec-cCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCC
Q 045798 748 TSCSSIDFQGNDFKAIVYEY-MPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLK 826 (1008)
Q Consensus 748 ~~~~~~~~~~~~~~~lv~e~-~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlk 826 (1008)
+++ ...+..++|||| +.+++|.+++.... .+++..++.++.||+.||+|||+. +|+|||||
T Consensus 105 ~~~-----~~~~~~~~v~e~~~~~~~L~~~l~~~~----------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlk 166 (312)
T 2iwi_A 105 DWF-----ETQEGFMLVLERPLPAQDLFDYITEKG----------PLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIK 166 (312)
T ss_dssp EEC----------CEEEEECCSSEEEHHHHHHHHC----------SCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCS
T ss_pred EEE-----ecCCeEEEEEEecCCCCCHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCC
Confidence 994 455668999999 78999999997643 689999999999999999999998 99999999
Q ss_pred CCCeeec-CCCCeEEcccCcccccccccCccccccccccccccccCccccCCCCC-CcccchhhHHHHHHHHHhCCCCCC
Q 045798 827 PSNILLD-NDLSGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEV-STNGDVYSYGILLLEMVTAKKPTD 904 (1008)
Q Consensus 827 p~NIll~-~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~vl~elltG~~pf~ 904 (1008)
|+||+++ .++.+||+|||.+....... .....|+..|+|||++.+..+ +.++|||||||++|||++|+.||.
T Consensus 167 p~Nil~~~~~~~~kl~dfg~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~ 240 (312)
T 2iwi_A 167 DENILIDLRRGCAKLIDFGSGALLHDEP------YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFE 240 (312)
T ss_dssp GGGEEEETTTTEEEECCCSSCEECCSSC------BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCC
T ss_pred hhhEEEeCCCCeEEEEEcchhhhcccCc------ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCC
Confidence 9999999 88999999999998665432 123458999999999876665 458999999999999999999986
Q ss_pred ccccCCccHHHHHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHH
Q 045798 905 VMFEGDLNLHNFARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNV 984 (1008)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ev 984 (1008)
...+ ... .... ++ ...+..+.+++.+||+.||++|||++|+
T Consensus 241 ~~~~-------~~~------------~~~~--------------~~------~~~~~~~~~li~~~l~~~p~~Rps~~e~ 281 (312)
T 2iwi_A 241 RDQE-------ILE------------AELH--------------FP------AHVSPDCCALIRRCLAPKPSSRPSLEEI 281 (312)
T ss_dssp SHHH-------HHH------------TCCC--------------CC------TTSCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred ChHH-------Hhh------------hccC--------------Cc------ccCCHHHHHHHHHHccCChhhCcCHHHH
Confidence 3210 000 0000 00 0123457899999999999999999999
Q ss_pred HH
Q 045798 985 VH 986 (1008)
Q Consensus 985 l~ 986 (1008)
++
T Consensus 282 l~ 283 (312)
T 2iwi_A 282 LL 283 (312)
T ss_dssp HH
T ss_pred hc
Confidence 87
No 276
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=3.6e-37 Score=340.96 Aligned_cols=265 Identities=23% Similarity=0.305 Sum_probs=196.6
Q ss_pred HHhcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEecccc--chhhHHHHHHHHHHhhcCCCCceeeeeccccccccCC
Q 045798 681 KATNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQC--EGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGN 758 (1008)
Q Consensus 681 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 758 (1008)
...++|++.+.||+|+||.||+|.+.. .||+|+++... ....+.+.+|+.++++++||||+++++++ ..+
T Consensus 30 i~~~~~~~~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-----~~~ 101 (319)
T 2y4i_B 30 IPFEQLEIGELIGKGRFGQVYHGRWHG---EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGAC-----MSP 101 (319)
T ss_dssp SCCSCEECCCBCCCSSSSEEEEEEESS---SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEE-----ECS
T ss_pred CCHHHeEEeeEeccCCceEEEEEEEcC---eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEE-----ecC
Confidence 346789999999999999999999853 49999987432 23345688999999999999999999995 445
Q ss_pred ceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCe
Q 045798 759 DFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSG 838 (1008)
Q Consensus 759 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 838 (1008)
+..++||||+++++|.+++..... .+++..++.++.||+.||+|||+. +|+||||||+||+++ ++.+
T Consensus 102 ~~~~iv~e~~~~~~L~~~l~~~~~---------~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~ 168 (319)
T 2y4i_B 102 PHLAIITSLCKGRTLYSVVRDAKI---------VLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKV 168 (319)
T ss_dssp SCEEEECBCCCSEEHHHHTTSSCC---------CCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CC
T ss_pred CceEEEeecccCCcHHHHHHhcCC---------CCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCE
Confidence 669999999999999999976431 588999999999999999999998 999999999999998 6799
Q ss_pred EEcccCcccccccccCc-cccccccccccccccCccccCC---------CCCCcccchhhHHHHHHHHHhCCCCCCcccc
Q 045798 839 HIGDFGLARFHQEVSNS-TLSSSVGVKGTIGYTAPEYGLG---------SEVSTNGDVYSYGILLLEMVTAKKPTDVMFE 908 (1008)
Q Consensus 839 kL~Dfg~a~~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~---------~~~~~~sDvwslG~vl~elltG~~pf~~~~~ 908 (1008)
||+|||++......... .........|++.|+|||++.+ ..++.++|||||||++|||++|+.||.....
T Consensus 169 ~l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~ 248 (319)
T 2y4i_B 169 VITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPA 248 (319)
T ss_dssp EECCCSCCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCH
T ss_pred EEeecCCccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 99999998755322111 1111223458999999999864 3578899999999999999999999864321
Q ss_pred CCccHHHHHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHHH
Q 045798 909 GDLNLHNFARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHEL 988 (1008)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L 988 (1008)
.. ......... .+... ....+.++.+++.+||+.||++|||+.|+++.|
T Consensus 249 ~~--~~~~~~~~~--------~~~~~---------------------~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l 297 (319)
T 2y4i_B 249 EA--IIWQMGTGM--------KPNLS---------------------QIGMGKEISDILLFCWAFEQEERPTFTKLMDML 297 (319)
T ss_dssp HH--HHHHHHTTC--------CCCCC---------------------CSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHH
T ss_pred HH--HHHHhccCC--------CCCCC---------------------cCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHH
Confidence 10 000000000 00000 001234578999999999999999999999999
Q ss_pred HHHHHHHHH
Q 045798 989 QSVKNILLE 997 (1008)
Q Consensus 989 ~~i~~~~~~ 997 (1008)
+++.+....
T Consensus 298 ~~l~~~~~~ 306 (319)
T 2y4i_B 298 EKLPKRNRR 306 (319)
T ss_dssp TTC------
T ss_pred HHHHHhhcc
Confidence 998776544
No 277
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=5.9e-37 Score=338.73 Aligned_cols=242 Identities=23% Similarity=0.290 Sum_probs=197.4
Q ss_pred HhcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccc------hhhHHHHHHHHHHhhcC--CCCceeeeeccccc
Q 045798 682 ATNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCE------GASKSFMAECKALKNIR--HRNLVKVITSCSSI 753 (1008)
Q Consensus 682 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~ 753 (1008)
..++|++.+.||+|+||.||+|.+..+++.||||+++.... ...+.+.+|+.+++++. |+||+++++++
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~--- 117 (320)
T 3a99_A 41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWF--- 117 (320)
T ss_dssp CTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEE---
T ss_pred ccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEE---
Confidence 45789999999999999999999988999999999975422 12356788999999995 59999999994
Q ss_pred cccCCceEEEEEeccCC-CChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeee
Q 045798 754 DFQGNDFKAIVYEYMPN-GSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILL 832 (1008)
Q Consensus 754 ~~~~~~~~~lv~e~~~~-gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll 832 (1008)
..++..++|||++.+ ++|.+++.... .+++..++.++.||+.||+|||+. +|+||||||+||++
T Consensus 118 --~~~~~~~lv~e~~~~~~~L~~~l~~~~----------~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll 182 (320)
T 3a99_A 118 --ERPDSFVLILERPEPVQDLFDFITERG----------ALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILI 182 (320)
T ss_dssp --ECSSEEEEEEECCSSEEEHHHHHHHHC----------SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEE
T ss_pred --ecCCcEEEEEEcCCCCccHHHHHhccC----------CCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEE
Confidence 556779999999976 89999987543 689999999999999999999998 99999999999999
Q ss_pred c-CCCCeEEcccCcccccccccCccccccccccccccccCccccCCCCC-CcccchhhHHHHHHHHHhCCCCCCccccCC
Q 045798 833 D-NDLSGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEV-STNGDVYSYGILLLEMVTAKKPTDVMFEGD 910 (1008)
Q Consensus 833 ~-~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~vl~elltG~~pf~~~~~~~ 910 (1008)
+ +++.+||+|||+++...... .....||+.|+|||++.+..+ +.++|||||||++|||++|+.||....+
T Consensus 183 ~~~~~~~kL~Dfg~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-- 254 (320)
T 3a99_A 183 DLNRGELKLIDFGSGALLKDTV------YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE-- 254 (320)
T ss_dssp ETTTTEEEECCCTTCEECCSSC------BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH--
T ss_pred eCCCCCEEEeeCcccccccccc------ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh--
Confidence 9 78999999999998664322 123458999999999877665 6789999999999999999999863210
Q ss_pred ccHHHHHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 911 LNLHNFARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
.... ... .+ ...+.++.+++.+||+.||++|||++|+++
T Consensus 255 -----~~~~------------~~~--------------~~------~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 255 -----IIRG------------QVF--------------FR------QRVSSECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp -----HHHC------------CCC--------------CS------SCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -----hhcc------------ccc--------------cc------ccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0000 000 00 012346789999999999999999999987
No 278
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=1.6e-36 Score=343.78 Aligned_cols=283 Identities=18% Similarity=0.251 Sum_probs=201.7
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhhcC-----------CCCceeeeeccc
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKNIR-----------HRNLVKVITSCS 751 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~~~~~~~ 751 (1008)
.++|++.+.||+|+||.||+|.+..+++.||||+++.. ....+.+.+|+++++++. ||||+++++++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 46899999999999999999999889999999999743 334567889999999886 899999999865
Q ss_pred cccccCCceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCee
Q 045798 752 SIDFQGNDFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNIL 831 (1008)
Q Consensus 752 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIl 831 (1008)
... ......++||||+ +++|.+++...... .+++..++.++.||+.||+|||++ .+|+||||||+||+
T Consensus 97 ~~~-~~~~~~~lv~e~~-~~~L~~~~~~~~~~--------~~~~~~~~~i~~qi~~aL~~lH~~--~~ivH~Dikp~NIl 164 (373)
T 1q8y_A 97 HKG-PNGVHVVMVFEVL-GENLLALIKKYEHR--------GIPLIYVKQISKQLLLGLDYMHRR--CGIIHTDIKPENVL 164 (373)
T ss_dssp EEE-TTEEEEEEEECCC-CEEHHHHHHHTTTS--------CCCHHHHHHHHHHHHHHHHHHHHT--TCEECSCCSGGGEE
T ss_pred ccC-CCCceEEEEEecC-CCCHHHHHHHhhcc--------CCcHHHHHHHHHHHHHHHHHHHhc--CCEEecCCChHHeE
Confidence 321 2334789999999 99999999764321 589999999999999999999983 28999999999999
Q ss_pred ec------CCCCeEEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCc
Q 045798 832 LD------NDLSGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDV 905 (1008)
Q Consensus 832 l~------~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~ 905 (1008)
++ ..+.+||+|||+++...... ....||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 165 l~~~~~~~~~~~~kl~Dfg~a~~~~~~~-------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~ 237 (373)
T 1q8y_A 165 MEIVDSPENLIQIKIADLGNACWYDEHY-------TNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEP 237 (373)
T ss_dssp EEEEETTTTEEEEEECCCTTCEETTBCC-------CSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC--
T ss_pred EeccCCCcCcceEEEcccccccccCCCC-------CCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 94 44589999999998654321 223589999999999999999999999999999999999999975
Q ss_pred cccCCc-----cHHHHHHhhC--Ccchhh-------hhcc--cccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhc
Q 045798 906 MFEGDL-----NLHNFARMAL--PNQVMD-------IVDP--ILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVA 969 (1008)
Q Consensus 906 ~~~~~~-----~~~~~~~~~~--~~~~~~-------~~d~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 969 (1008)
...... .......... +..... +... .+..... ....................+.++.+++.+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 316 (373)
T 1q8y_A 238 DEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISK-LKFWPLEDVLTEKYKFSKDEAKEISDFLSP 316 (373)
T ss_dssp -------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCC-CCBCCHHHHHHHTTCCCHHHHHHHHHHHGG
T ss_pred CcccccCChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhccccc-ccccchhhhhhhcccCCcchHHHHHHHHHH
Confidence 322110 1111111110 100000 0000 0000000 000000000001111224677889999999
Q ss_pred ccCcCCCCCCCHHHHHH
Q 045798 970 CSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 970 cl~~dP~~RPt~~evl~ 986 (1008)
||+.||++|||++|+++
T Consensus 317 ~L~~dP~~Rpt~~ell~ 333 (373)
T 1q8y_A 317 MLQLDPRKRADAGGLVN 333 (373)
T ss_dssp GGCSSTTTCBCHHHHHT
T ss_pred HhccCccccCCHHHHhh
Confidence 99999999999999986
No 279
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=3.7e-36 Score=346.14 Aligned_cols=259 Identities=23% Similarity=0.271 Sum_probs=184.3
Q ss_pred cCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhhc-CCCCceeeeeccccccccCCceEE
Q 045798 684 NGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKNI-RHRNLVKVITSCSSIDFQGNDFKA 762 (1008)
Q Consensus 684 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~ 762 (1008)
+.|.+.+.||+|+||+||.+.. .+|+.||||++... ..+.+.+|+++++++ +||||++++++ +..++..+
T Consensus 15 ~~~~~~~~LG~G~~g~V~~~~~-~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~-----~~~~~~~~ 85 (434)
T 2rio_A 15 NLVVSEKILGYGSSGTVVFQGS-FQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCS-----ETTDRFLY 85 (434)
T ss_dssp SCEEEEEEEEECSTTCEEEEEE-SSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEE-----EECSSEEE
T ss_pred heeeccCeEeeCCCeEEEEEEE-ECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEE-----EecCCeEE
Confidence 3455678899999999987654 47999999998643 345678999999887 89999999998 45667799
Q ss_pred EEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCC-------
Q 045798 763 IVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDND------- 835 (1008)
Q Consensus 763 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~------- 835 (1008)
+||||++ |+|.+++......... ....++..++.++.||+.||+|||+. +|+||||||+||+++.+
T Consensus 86 lv~E~~~-gsL~~~l~~~~~~~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~ 158 (434)
T 2rio_A 86 IALELCN-LNLQDLVESKNVSDEN---LKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQ 158 (434)
T ss_dssp EEECCCS-EEHHHHHHTC---------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCC
T ss_pred EEEecCC-CCHHHHHhccCCCchh---hhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCccccccc
Confidence 9999995 6999999765422110 00123445678999999999999998 99999999999999754
Q ss_pred ------CCeEEcccCcccccccccCccccccccccccccccCccccCC-------CCCCcccchhhHHHHHHHHHh-CCC
Q 045798 836 ------LSGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLG-------SEVSTNGDVYSYGILLLEMVT-AKK 901 (1008)
Q Consensus 836 ------~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~sDvwslG~vl~ellt-G~~ 901 (1008)
+.+||+|||+++.................||+.|+|||++.+ ..++.++|||||||++|||++ |+.
T Consensus 159 ~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~ 238 (434)
T 2rio_A 159 QTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKH 238 (434)
T ss_dssp TTCCCSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCC
T ss_pred ccCCCceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCC
Confidence 489999999998765443222212234569999999999876 578999999999999999999 999
Q ss_pred CCCccccCCccHHHHHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCH
Q 045798 902 PTDVMFEGDLNLHNFARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNM 981 (1008)
Q Consensus 902 pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~ 981 (1008)
||....... ............ . ........+.++.+++.+||+.||.+|||+
T Consensus 239 Pf~~~~~~~---~~i~~~~~~~~~-------~------------------~~~~~~~~~~~~~~li~~~L~~dP~~Rps~ 290 (434)
T 2rio_A 239 PFGDKYSRE---SNIIRGIFSLDE-------M------------------KCLHDRSLIAEATDLISQMIDHDPLKRPTA 290 (434)
T ss_dssp TTCSTTTHH---HHHHHTCCCCCC-------C------------------TTCCCHHHHHHHHHHHHHHTCSSGGGSCCH
T ss_pred CCCCchhhH---HHHhcCCCCccc-------c------------------cccccccchHHHHHHHHHHhhCChhhCCCH
Confidence 986432111 111111100000 0 000112456778999999999999999999
Q ss_pred HHHHH
Q 045798 982 TNVVH 986 (1008)
Q Consensus 982 ~evl~ 986 (1008)
.||++
T Consensus 291 ~eil~ 295 (434)
T 2rio_A 291 MKVLR 295 (434)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 99986
No 280
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=2.8e-36 Score=334.92 Aligned_cols=259 Identities=21% Similarity=0.260 Sum_probs=177.1
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccc-hhhHHHHHHHH-HHhhcCCCCceeeeeccccccccCCce
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCE-GASKSFMAECK-ALKNIRHRNLVKVITSCSSIDFQGNDF 760 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~~~~ 760 (1008)
.++|++.+.||+|+||.||+|.+..+++.||||+++.... .....+..|+. +++.++||||+++++++ ..++.
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~-----~~~~~ 95 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGAL-----FREGD 95 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEE-----ECSSE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEE-----EeCCc
Confidence 4689999999999999999999988999999999975432 33445666666 67778999999999995 45567
Q ss_pred EEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeEE
Q 045798 761 KAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGHI 840 (1008)
Q Consensus 761 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 840 (1008)
.++||||++ ++|.+++...... ....+++..+..++.|++.||.|||+. .+|+||||||+||+++.++.+||
T Consensus 96 ~~lv~e~~~-~~l~~~~~~~~~~-----~~~~~~~~~~~~i~~~i~~~l~~lH~~--~~ivH~dlkp~NIll~~~~~~kl 167 (327)
T 3aln_A 96 CWICMELMS-TSFDKFYKYVYSV-----LDDVIPEEILGKITLATVKALNHLKEN--LKIIHRDIKPSNILLDRSGNIKL 167 (327)
T ss_dssp EEEEECCCS-EEHHHHHHHHHHT-----TCCCCCHHHHHHHHHHHHHHHHHHHHH--HSCCCSCCCGGGEEEETTTEEEE
T ss_pred eEEEEeecC-CChHHHHHHHHhh-----hcccCcHHHHHHHHHHHHHHHHHHhcc--CCEeECCCCHHHEEEcCCCCEEE
Confidence 899999996 5888777531100 011689999999999999999999984 38999999999999999999999
Q ss_pred cccCcccccccccCccccccccccccccccCcccc----CCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHH
Q 045798 841 GDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYG----LGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNF 916 (1008)
Q Consensus 841 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~ 916 (1008)
+|||+++....... .....||+.|+|||++ .+..++.++|||||||++|||++|+.||.........
T Consensus 168 ~Dfg~~~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~---- 238 (327)
T 3aln_A 168 CDFGISGQLVDSIA-----KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQ---- 238 (327)
T ss_dssp CCCSSSCC-----------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC----------
T ss_pred ccCCCceecccccc-----cccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHH----
Confidence 99999986543321 1223589999999998 4567899999999999999999999998643211000
Q ss_pred HHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 917 ARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 917 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
+......... .+.. ......+..+.+++.+||+.||++|||+.|+++
T Consensus 239 ------------~~~~~~~~~~---------~~~~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 239 ------------LTQVVKGDPP---------QLSN--SEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp -------------CCCCCSCCC---------CCCC--CSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred ------------HHHHhcCCCC---------CCCC--cccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 0000000000 0000 000123456899999999999999999999987
No 281
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=100.00 E-value=3.6e-35 Score=324.50 Aligned_cols=275 Identities=19% Similarity=0.245 Sum_probs=220.7
Q ss_pred hhhccCChhhHHHHHHHHHhhccCCCCCCCCC----CCCCCCCcccceEEcC--------CCCeEEEEeccccCCCCccC
Q 045798 4 FQVAALEDGDRAALQAFKSMIAHEPQGILNSW----NDSRHFCEWEGITCGR--------RHRRVTALDLMSKSLSGSLS 71 (1008)
Q Consensus 4 ~~~~~~~~~~~~~l~~~k~~~~~~~~~~~~~w----~~~~~~c~w~gv~c~~--------~~~~v~~l~l~~~~l~~~l~ 71 (1008)
.|..++..+|++||++||+++..||.+.+.+| ....++|.|.|+.|.. ...+|+.|+|+++.++ .+|
T Consensus 19 ~~~~~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp 97 (328)
T 4fcg_A 19 FQGSTALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFP 97 (328)
T ss_dssp CC--CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCC
T ss_pred eeccccCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcC
Confidence 45667888999999999999988888888899 5677899999999952 3467899999999988 788
Q ss_pred cCccCCccCCeeeecCCCCCCCCCccccCCCCCCEEEccCCCCCCccCcccccCcCcceEeeeccccccCCCccccc---
Q 045798 72 PHLGNLSFLREINLSNNTIQGEIPPEFGRLFRLEALFLSNNSLVGKIPANLSYCSRLTVLCIEYNKLQGRIPLEFVS--- 148 (1008)
Q Consensus 72 ~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~--- 148 (1008)
+.++.+++|++|+|++|.++ .+|..|+++++|++|+|++|.++ .+|..++.+++|++|+|++|++.+.+|..+..
T Consensus 98 ~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~ 175 (328)
T 4fcg_A 98 DQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDA 175 (328)
T ss_dssp SCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-
T ss_pred hhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccc
Confidence 88888999999999999998 88888999999999999999998 78888999999999999998888888887764
Q ss_pred ------cCCCCeeecccccCCCCCCCCCccccccchhhcccccCCCCCCccccCCCCCcEEEecCCcccccCCccccCCC
Q 045798 149 ------LSKLKDLSLAKNKLTGGIPPFLGNLTSLEVLSLAGNSFGRNIPDSLGQLKQLKILAIGGNNLSGPIPPSIYNLS 222 (1008)
Q Consensus 149 ------l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 222 (1008)
+++|++|+|++|+++ .+|..++++++|++|+|++|++++ +|..|..+++|++|+|++|.+.+.+|..+.+++
T Consensus 176 ~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~ 253 (328)
T 4fcg_A 176 SGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRA 253 (328)
T ss_dssp CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCC
T ss_pred hhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEECcCCcchhhhHHHhcCCC
Confidence 778888888888887 677777778888888888888764 555677788888888888777777777777777
Q ss_pred CcceeccccccccccCChhhhhcCCCCcEEEeccccCCCCCCcccccCCCCceeeccccccc
Q 045798 223 FLVVFSVSHNQIHGSLPPSLGLLLPNLKFFQIHHNFFSGSIPISLSNASKLEHIEIANNNFS 284 (1008)
Q Consensus 223 ~L~~L~ls~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 284 (1008)
+|+.|++++|.+.+.+|..+. .+++|++|+|++|.+.+.+|..+.++++|+.+++..+.+.
T Consensus 254 ~L~~L~L~~n~~~~~~p~~~~-~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 254 PLKRLILKDCSNLLTLPLDIH-RLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp CCCEEECTTCTTCCBCCTTGG-GCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred CCCEEECCCCCchhhcchhhh-cCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHH
Confidence 777777777777767776643 3677777777777777777777777777777776665554
No 282
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=1.2e-35 Score=328.74 Aligned_cols=252 Identities=22% Similarity=0.251 Sum_probs=178.6
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccch--hhHHHHHHHHHHhhcCCCCceeeeeccccccccCCce
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEG--ASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDF 760 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 760 (1008)
.++|++.+.||+|+||.||+|.+..+++.||||++...... ..+.+.++..+++.++||||+++++++ ..++.
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~-----~~~~~ 98 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTF-----ITNTD 98 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEE-----ECSSE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEE-----ecCCc
Confidence 46789999999999999999999889999999999754322 223445555678888999999999995 45667
Q ss_pred EEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhh-CCCCCceeccCCCCCeeecCCCCeE
Q 045798 761 KAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHH-HCQEPILHCDLKPSNILLDNDLSGH 839 (1008)
Q Consensus 761 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~k 839 (1008)
.++||||+ ++.+..+..... ..+++..++.++.|++.||+|||+ . +|+||||||+||+++.++.+|
T Consensus 99 ~~lv~e~~-~~~~~~l~~~~~---------~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~k 165 (318)
T 2dyl_A 99 VFIAMELM-GTCAEKLKKRMQ---------GPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIK 165 (318)
T ss_dssp EEEEECCC-SEEHHHHHHHHT---------SCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEE
T ss_pred EEEEEecc-CCcHHHHHHHhc---------cCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEE
Confidence 99999999 555655544321 168999999999999999999998 4 899999999999999999999
Q ss_pred EcccCcccccccccCccccccccccccccccCccccC-----CCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHH
Q 045798 840 IGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGL-----GSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLH 914 (1008)
Q Consensus 840 L~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~ 914 (1008)
|+|||.+........ .....+|+.|+|||++. +..++.++|||||||++|||++|+.||...........
T Consensus 166 l~dfg~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~ 240 (318)
T 2dyl_A 166 LCDFGISGRLVDDKA-----KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLT 240 (318)
T ss_dssp ECCCTTC-------------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHH
T ss_pred EEECCCchhccCCcc-----ccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHH
Confidence 999999976543221 12245899999999984 45688999999999999999999999864211111111
Q ss_pred HHHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 915 NFARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 915 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
.......+ ..+.....+.++.+++.+||+.||.+|||++|+++
T Consensus 241 ~~~~~~~~-----------------------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 241 KVLQEEPP-----------------------------LLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp HHHHSCCC-----------------------------CCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred HHhccCCC-----------------------------CCCccCCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 11110000 00000123456789999999999999999999987
No 283
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=1.4e-35 Score=338.90 Aligned_cols=268 Identities=15% Similarity=0.135 Sum_probs=192.5
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccc---hhhHHHHHHHHHHhhcCC-CCceeeeec---------
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCE---GASKSFMAECKALKNIRH-RNLVKVITS--------- 749 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h-~niv~~~~~--------- 749 (1008)
...|...+.||+|+||.||+|.+..+|+.||||+++.... ...+.+.+|+.+++.+.| ++......+
T Consensus 77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T 3dzo_A 77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 156 (413)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence 3457788999999999999999988999999999974322 335789999999999977 322111111
Q ss_pred ------------cccccccCCceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCC
Q 045798 750 ------------CSSIDFQGNDFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQ 817 (1008)
Q Consensus 750 ------------~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~ 817 (1008)
+...........+++|+++ +++|.+++....... .....+++..++.++.||+.||+|||+.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~---~~~~~l~~~~~~~i~~qi~~aL~~LH~~-- 230 (413)
T 3dzo_A 157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHS---STHKSLVHHARLQLTLQVIRLLASLHHY-- 230 (413)
T ss_dssp EECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHT---TTSHHHHHHHHHHHHHHHHHHHHHHHHT--
T ss_pred cccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhccc---ccCCCCCHHHHHHHHHHHHHHHHHHHhC--
Confidence 0000001123467788877 789999884211000 0012688999999999999999999998
Q ss_pred CCceeccCCCCCeeecCCCCeEEcccCcccccccccCccccccccccccccccCcccc----------CCCCCCcccchh
Q 045798 818 EPILHCDLKPSNILLDNDLSGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYG----------LGSEVSTNGDVY 887 (1008)
Q Consensus 818 ~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~sDvw 887 (1008)
+|+||||||+|||++.++.+||+|||+++..... .....| +.|+|||++ .+..++.++|||
T Consensus 231 -~iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~-------~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~Dvw 301 (413)
T 3dzo_A 231 -GLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS-------AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTW 301 (413)
T ss_dssp -TEECSCCCGGGEEECTTCCEEECCGGGCEETTEE-------ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHH
T ss_pred -CcccCCcccceEEEecCCeEEEEeccceeecCCc-------cccCCC-CceeCchhhhccccccccccCcCCCchhhHH
Confidence 9999999999999999999999999999865433 223457 999999998 666788999999
Q ss_pred hHHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHH
Q 045798 888 SYGILLLEMVTAKKPTDVMFEGDLNLHNFARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIG 967 (1008)
Q Consensus 888 slG~vl~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 967 (1008)
||||++|||++|+.||........ .+..+... . ..+.++.+++
T Consensus 302 SlGvil~elltg~~Pf~~~~~~~~-----------------~~~~~~~~----------~----------~~~~~~~~li 344 (413)
T 3dzo_A 302 TLGLAIYWIWCADLPNTDDAALGG-----------------SEWIFRSC----------K----------NIPQPVRALL 344 (413)
T ss_dssp HHHHHHHHHHHSSCCCCTTGGGSC-----------------SGGGGSSC----------C----------CCCHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCCcchhhh-----------------HHHHHhhc----------c----------cCCHHHHHHH
Confidence 999999999999999864321110 00001000 0 1235689999
Q ss_pred hcccCcCCCCCCCHHHHHHH--HHHHHHHHHHHHHhh
Q 045798 968 VACSMESPQDRMNMTNVVHE--LQSVKNILLELETVF 1002 (1008)
Q Consensus 968 ~~cl~~dP~~RPt~~evl~~--L~~i~~~~~~~~~~~ 1002 (1008)
.+||+.||++|||+.|+++. ++.+.+........+
T Consensus 345 ~~~l~~dP~~Rpt~~~~l~~~~~~~~~~~~~~~~~~~ 381 (413)
T 3dzo_A 345 EGFLRYPKEDRLLPLQAMETPEYEQLRTELSAALPLY 381 (413)
T ss_dssp HHHTCSSGGGSCCHHHHTTSHHHHHHHHHHHHHGGGG
T ss_pred HHHccCChhhCcCHHHHHhCHHHHHHHHHHHHHhhhh
Confidence 99999999999999999874 556655555444333
No 284
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=5.3e-35 Score=316.66 Aligned_cols=236 Identities=11% Similarity=0.062 Sum_probs=183.6
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEecccc---chhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCc
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQC---EGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGND 759 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 759 (1008)
.++|++.+.||+|+||.||+|.+..+++.||||+++... ....+.+.+|+.++++++||||+++++++ ..++
T Consensus 30 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~-----~~~~ 104 (286)
T 3uqc_A 30 NGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVV-----HTRA 104 (286)
T ss_dssp TTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-----EETT
T ss_pred cCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEE-----EECC
Confidence 367999999999999999999998889999999997543 23347899999999999999999999995 4566
Q ss_pred eEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeE
Q 045798 760 FKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGH 839 (1008)
Q Consensus 760 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 839 (1008)
..|+||||+++++|.+++... ....++..|+.|++.||+|||++ +|+||||||+||+++.++.+|
T Consensus 105 ~~~lv~e~~~g~~L~~~l~~~------------~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~k 169 (286)
T 3uqc_A 105 GGLVVAEWIRGGSLQEVADTS------------PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVV 169 (286)
T ss_dssp EEEEEEECCCEEEHHHHHTTC------------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEE
T ss_pred cEEEEEEecCCCCHHHHHhcC------------CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEE
Confidence 799999999999999998532 24457888999999999999998 999999999999999999999
Q ss_pred EcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHHh
Q 045798 840 IGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFARM 919 (1008)
Q Consensus 840 L~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~~ 919 (1008)
|+++| |++ .++.++|||||||++|||++|+.||............
T Consensus 170 l~~~~------------------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~---- 214 (286)
T 3uqc_A 170 LAYPA------------------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPA---- 214 (286)
T ss_dssp ECSCC------------------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEEC----
T ss_pred EEecc------------------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHH----
Confidence 97443 333 2688999999999999999999999753221100000
Q ss_pred hCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHHHHHHHHHHHH
Q 045798 920 ALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVHELQSVKNILL 996 (1008)
Q Consensus 920 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~i~~~~~ 996 (1008)
........ ..........+.++.+++.+||+.||++| |+.|+++.|+++.....
T Consensus 215 ----------~~~~~~~~------------~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~~ 268 (286)
T 3uqc_A 215 ----------ERDTAGQP------------IEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAVAD 268 (286)
T ss_dssp ----------CBCTTSCB------------CCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC---
T ss_pred ----------HHHhccCC------------CChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccCC
Confidence 00000000 00000011245568999999999999999 99999999999876543
No 285
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.7e-35 Score=337.59 Aligned_cols=251 Identities=24% Similarity=0.322 Sum_probs=182.3
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhhc-CCCCceeeeeccccccccCCceE
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKNI-RHRNLVKVITSCSSIDFQGNDFK 761 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~ 761 (1008)
..+|.+.+.||+|+||+||.... .+++.||||++..... ..+.+|+++++++ +||||+++++++ .+....
T Consensus 23 ~~~y~~~~~LG~G~~G~V~~~~~-~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~-----~~~~~~ 93 (432)
T 3p23_A 23 KISFCPKDVLGHGAEGTIVYRGM-FDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTE-----KDRQFQ 93 (432)
T ss_dssp TEEEEEEEEEEECGGGCEEEEEE-SSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEE-----EETTEE
T ss_pred cEEEecCCeeecCcCEEEEEEEE-eCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEE-----ecCCEE
Confidence 45688899999999999764333 4789999999864322 3467899999999 899999999984 556678
Q ss_pred EEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecC-----CC
Q 045798 762 AIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDN-----DL 836 (1008)
Q Consensus 762 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-----~~ 836 (1008)
|+||||++ |+|.+++..... ...+..++.++.||+.||+|||+. +|+||||||+||+++. ..
T Consensus 94 ~lv~E~~~-g~L~~~l~~~~~---------~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~ 160 (432)
T 3p23_A 94 YIAIELCA-ATLQEYVEQKDF---------AHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKI 160 (432)
T ss_dssp EEEEECCS-EEHHHHHHSSSC---------CCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBC
T ss_pred EEEEECCC-CCHHHHHHhcCC---------CccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCce
Confidence 99999995 699999976542 234445678999999999999998 9999999999999953 34
Q ss_pred CeEEcccCcccccccccCccccccccccccccccCccccC---CCCCCcccchhhHHHHHHHHHh-CCCCCCccccCCcc
Q 045798 837 SGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGL---GSEVSTNGDVYSYGILLLEMVT-AKKPTDVMFEGDLN 912 (1008)
Q Consensus 837 ~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslG~vl~ellt-G~~pf~~~~~~~~~ 912 (1008)
.+||+|||+|+......... .......||+.|+|||++. ...++.++|||||||++|||++ |..||......
T Consensus 161 ~~kL~DFG~a~~~~~~~~~~-~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~--- 236 (432)
T 3p23_A 161 KAMISDFGLCKKLAVGRHSF-SRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQR--- 236 (432)
T ss_dssp CEEECCTTEEECC-------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTH---
T ss_pred eEEEecccceeeccCCCcce-eeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHH---
Confidence 68899999998765432211 1223456999999999987 4567889999999999999999 89998532111
Q ss_pred HHHHHHhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 913 LHNFARMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 913 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
............. ..........+.+++.+||+.||.+|||++||++
T Consensus 237 ---~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 237 ---QANILLGACSLDC------------------------LHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp ---HHHHHTTCCCCTT------------------------SCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ---HHHHHhccCCccc------------------------cCccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 0000000000000 0001123455789999999999999999999994
No 286
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=9.7e-35 Score=353.80 Aligned_cols=249 Identities=23% Similarity=0.320 Sum_probs=197.9
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcC-CCeEEEEEEecccc-chhhHHHHHHHHHHhhcCCCCceeeeeccccccccCCce
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDE-DGIVVAIKVINLQC-EGASKSFMAECKALKNIRHRNLVKVITSCSSIDFQGNDF 760 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 760 (1008)
.++|++.+.||+|+||.||+|.+.. +++.||||++.... ....+.+.+|++++++++||||+++++++......+...
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 158 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV 158 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence 3689999999999999999999975 78999999986433 344567899999999999999999999976543333334
Q ss_pred EEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeEE
Q 045798 761 KAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGHI 840 (1008)
Q Consensus 761 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 840 (1008)
.|+||||+++++|.+++.. .+++.+++.|+.||+.||+|||++ +||||||||+||+++.+ .+||
T Consensus 159 ~~lv~E~~~g~~L~~~~~~------------~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl 222 (681)
T 2pzi_A 159 GYIVMEYVGGQSLKRSKGQ------------KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKL 222 (681)
T ss_dssp EEEEEECCCCEECC----C------------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEE
T ss_pred eEEEEEeCCCCcHHHHHhC------------CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEE
Confidence 7999999999999987642 589999999999999999999998 99999999999999986 9999
Q ss_pred cccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHHHhh
Q 045798 841 GDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFARMA 920 (1008)
Q Consensus 841 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~~~~ 920 (1008)
+|||+++..... ....||+.|+|||++.+. ++.++|||||||++|+|++|..||........
T Consensus 223 ~DFG~a~~~~~~--------~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~--------- 284 (681)
T 2pzi_A 223 IDLGAVSRINSF--------GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVDGL--------- 284 (681)
T ss_dssp CCCTTCEETTCC--------SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECSSC---------
T ss_pred EecccchhcccC--------CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCcccccccc---------
Confidence 999999865432 234589999999998765 48899999999999999999988753211100
Q ss_pred CCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCC-CHHHHHHHHHHHHHHH
Q 045798 921 LPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRM-NMTNVVHELQSVKNIL 995 (1008)
Q Consensus 921 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-t~~evl~~L~~i~~~~ 995 (1008)
+ ... .....+..+.+++.+||+.||.+|| +++++.+.|..+....
T Consensus 285 -~-----------~~~------------------~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~~ 330 (681)
T 2pzi_A 285 -P-----------EDD------------------PVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVLREV 330 (681)
T ss_dssp -C-----------TTC------------------HHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHHHH
T ss_pred -c-----------ccc------------------cccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHHHHh
Confidence 0 000 0112345688999999999999999 5677777787776544
No 287
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=4.8e-35 Score=321.63 Aligned_cols=256 Identities=32% Similarity=0.502 Sum_probs=183.0
Q ss_pred CCCcEEEecCCcCCc--cCChhhhhhcccceeeeecc-ccccCCCCCccccccccceEEecCccccCCcchhccCCCCCc
Q 045798 325 SKLRVLSLGGNQFRG--ALPHSIANLSSQLQILILSS-NQFYGSIPLGIGNLVDLYLLGMVENQFTGAIPKEMGKLQKLQ 401 (1008)
Q Consensus 325 ~~L~~L~Ls~N~l~~--~~p~~~~~l~~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 401 (1008)
.+++.|+|++|.+.+ .+|..+..+. +|++|+|++ |.+.+.+|..+.++++|++|+|++|++++.+|..|..+++|+
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~-~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~ 128 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLP-YLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLV 128 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCT-TCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCC
T ss_pred ceEEEEECCCCCccCCcccChhHhCCC-CCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCC
Confidence 356777777777776 6677666665 477777774 677767777777777777777777777766777777777777
Q ss_pred eEEccCCcccccccccccCCCCcceeeccccccccccCCCCcCCC-cccEeecccccccCCcchhhhhhhhhhhhhcccC
Q 045798 402 GLDFSGNHFSGEIPSSLGNLSSLYEVFFNNNNLSGVIPFSLGNLK-RLAFLEMSGNELSGTIPEDIFNISYLSNSLNLAR 480 (1008)
Q Consensus 402 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~lp~~~~~~~~~~~~L~L~~ 480 (1008)
+|+|++|++++.+|..+..+++|++|++++|.+++.+|..+..++ +|+.|+|++|++++
T Consensus 129 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~-------------------- 188 (313)
T 1ogq_A 129 TLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTG-------------------- 188 (313)
T ss_dssp EEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEE--------------------
T ss_pred EEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeec--------------------
Confidence 777777777766676677777777777777777666666666666 66666666666664
Q ss_pred ccccCCCcccccccccccccccccccccCCCCcccccccccceeeccCcccccchhhhhhccccccEEecCCCccccccc
Q 045798 481 NHLVGIIPPRIGNLRALRSFDVSNNDLSGEIPIELGHCSSLEEIYLAGNLFHGSIPSFFNALKGVQKIDLSRNNLSGQIP 560 (1008)
Q Consensus 481 N~l~~~~p~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p 560 (1008)
.+|..++.+. |+.|+|++|.+++.+|..+..+++|++|+|++|++++.+|. +..+++|+.|+|++|++++.+|
T Consensus 189 -----~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p 261 (313)
T 1ogq_A 189 -----KIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLP 261 (313)
T ss_dssp -----ECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCC
T ss_pred -----cCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCC
Confidence 5555566665 77777777777777777777777777777777777766655 6677777777777777777777
Q ss_pred Cc-ccccccceeecccCcccccCCCCcccCCcccceeccCCccCCCCCC
Q 045798 561 IF-LEALSLEYLNLSFNDFEGKIPAKGIFANASAISVVGCNRLCGGIPE 608 (1008)
Q Consensus 561 ~~-~~~~~L~~L~l~~N~l~g~~p~~~~~~~~~~~~~~~n~~l~g~~~~ 608 (1008)
.. ..+.+|+.|+|++|+++|.+|....+.++..+.+.+|+++||.|.+
T Consensus 262 ~~l~~l~~L~~L~Ls~N~l~~~ip~~~~l~~L~~l~l~~N~~lc~~p~~ 310 (313)
T 1ogq_A 262 QGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSPLP 310 (313)
T ss_dssp GGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSSEEESTTSS
T ss_pred hHHhcCcCCCEEECcCCcccccCCCCccccccChHHhcCCCCccCCCCC
Confidence 65 5566777777777778777877766777777778888888886543
No 288
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=4.2e-34 Score=325.53 Aligned_cols=265 Identities=15% Similarity=0.138 Sum_probs=136.1
Q ss_pred CcCcceEeeeccccccCCCccccccCCCCeeecccccCCCCCCCCCccccccchhhcccccCCCCCCccccCCCCCcEEE
Q 045798 125 CSRLTVLCIEYNKLQGRIPLEFVSLSKLKDLSLAKNKLTGGIPPFLGNLTSLEVLSLAGNSFGRNIPDSLGQLKQLKILA 204 (1008)
Q Consensus 125 l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 204 (1008)
++++++|++++|.++...+..|..+++|++|+|++|.+++..+..|.++++|++|+|++|++++..|..|+.+++|++|+
T Consensus 44 l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 123 (390)
T 3o6n_A 44 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 123 (390)
T ss_dssp GCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEE
Confidence 46666666666666644444456666666666666666655555566666666666666666555555555555555555
Q ss_pred ecCCcccccCCccccCCCCcceeccccccccccCChhhhhcCCCCcEEEeccccCCCCCCcccccCCCCceeeccccccc
Q 045798 205 IGGNNLSGPIPPSIYNLSFLVVFSVSHNQIHGSLPPSLGLLLPNLKFFQIHHNFFSGSIPISLSNASKLEHIEIANNNFS 284 (1008)
Q Consensus 205 L~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 284 (1008)
+++|.++...+..|.+++ +|++|+|++|.+.+..|..+..+++|++|++++|+++
T Consensus 124 L~~n~l~~l~~~~~~~l~-------------------------~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 178 (390)
T 3o6n_A 124 LERNDLSSLPRGIFHNTP-------------------------KLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLT 178 (390)
T ss_dssp CCSSCCCCCCTTTTTTCT-------------------------TCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCS
T ss_pred CCCCccCcCCHHHhcCCC-------------------------CCcEEECCCCccCccChhhccCCCCCCEEECCCCcCC
Confidence 555555533333334444 4444444444444444444555555566666555554
Q ss_pred ccccccccCCCcccccccccccCCCCCCCcccccccccccCCCcEEEecCCcCCccCChhhhhhcccceeeeeccccccC
Q 045798 285 GKLSVNFGGMKNLSLLNLQFSNLGSGESDEMGFMNSLTNCSKLRVLSLGGNQFRGALPHSIANLSSQLQILILSSNQFYG 364 (1008)
Q Consensus 285 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~ 364 (1008)
+.. +. .+++|+.|++++|.+.+. + ....|+.|++++|.+..
T Consensus 179 ~~~---~~------------------------------~l~~L~~L~l~~n~l~~~-~-----~~~~L~~L~l~~n~l~~ 219 (390)
T 3o6n_A 179 HVD---LS------------------------------LIPSLFHANVSYNLLSTL-A-----IPIAVEELDASHNSINV 219 (390)
T ss_dssp BCC---GG------------------------------GCTTCSEEECCSSCCSEE-E-----CCSSCSEEECCSSCCCE
T ss_pred ccc---cc------------------------------cccccceeeccccccccc-C-----CCCcceEEECCCCeeee
Confidence 321 12 233444444444444421 0 01135555555555542
Q ss_pred CCCCccccccccceEEecCccccCCcchhccCCCCCceEEccCCcccccccccccCCCCcceeeccccccccccCCCCcC
Q 045798 365 SIPLGIGNLVDLYLLGMVENQFTGAIPKEMGKLQKLQGLDFSGNHFSGEIPSSLGNLSSLYEVFFNNNNLSGVIPFSLGN 444 (1008)
Q Consensus 365 ~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~ 444 (1008)
. |.. ..++|+.|++++|.+++. ..+..+++|+.|+|++|.+++..|..|..+++|++|+|++|++++ +|..+..
T Consensus 220 ~-~~~--~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~ 293 (390)
T 3o6n_A 220 V-RGP--VNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQP 293 (390)
T ss_dssp E-ECC--CCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSC
T ss_pred c-ccc--ccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCC
Confidence 1 211 123455555555555432 345555555555555555555555555555555555555555553 3334444
Q ss_pred CCcccEeeccccccc
Q 045798 445 LKRLAFLEMSGNELS 459 (1008)
Q Consensus 445 l~~L~~L~Ls~N~l~ 459 (1008)
+++|+.|+|++|+++
T Consensus 294 l~~L~~L~L~~n~l~ 308 (390)
T 3o6n_A 294 IPTLKVLDLSHNHLL 308 (390)
T ss_dssp CTTCCEEECCSSCCC
T ss_pred CCCCCEEECCCCcce
Confidence 555555555555554
No 289
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=3.1e-34 Score=313.90 Aligned_cols=236 Identities=18% Similarity=0.260 Sum_probs=181.0
Q ss_pred hcCCCCC-ceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHH-hhcCCCCceeeeeccccccccCCce
Q 045798 683 TNGFSST-HLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKAL-KNIRHRNLVKVITSCSSIDFQGNDF 760 (1008)
Q Consensus 683 ~~~y~~~-~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~~~~~~~~~~~~~~~~ 760 (1008)
.++|.+. +.||+|+||.||+|.+..+++.||+|+++.. ..+.+|+.++ +..+||||+++++++... ......
T Consensus 16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~-~~~~~~ 89 (299)
T 3m2w_A 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENL-YAGRKC 89 (299)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEE-ETTEEE
T ss_pred ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhh-cCCCce
Confidence 4567777 7899999999999999889999999998632 4677888888 555999999999986432 233567
Q ss_pred EEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecC---CCC
Q 045798 761 KAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDN---DLS 837 (1008)
Q Consensus 761 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~ 837 (1008)
.++||||+++|+|.+++...... .+++..++.++.|++.||+|||+. +|+||||||+||+++. ++.
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~~~~--------~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~ 158 (299)
T 3m2w_A 90 LLIVMECLDGGELFSRIQDRGDQ--------AFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAI 158 (299)
T ss_dssp EEEEECCCCSCBHHHHHHHCTTC--------CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCC
T ss_pred EEEEEeecCCCcHHHHHHhccCC--------CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCc
Confidence 89999999999999999865421 689999999999999999999998 9999999999999998 789
Q ss_pred eEEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCCCCccccCCccHHHHH
Q 045798 838 GHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTDVMFEGDLNLHNFA 917 (1008)
Q Consensus 838 ~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~~~~~~~~~~~~~~ 917 (1008)
+||+|||++.... +..++.++|||||||++|||++|+.||........
T Consensus 159 ~kl~Dfg~a~~~~--------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~------ 206 (299)
T 3m2w_A 159 LKLTDFGFAKETT--------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI------ 206 (299)
T ss_dssp EEECCCTTCEECT--------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC------------
T ss_pred EEEeccccccccc--------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhh------
Confidence 9999999986322 23467899999999999999999999864321100
Q ss_pred HhhCCcchhhhhcccccCchHHhhhhhhhhhccccchhHHHHHHHHHHHHhcccCcCCCCCCCHHHHHH
Q 045798 918 RMALPNQVMDIVDPILRNDEEILASTDKCRRMQTGINSRLECLISMVKIGVACSMESPQDRMNMTNVVH 986 (1008)
Q Consensus 918 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 986 (1008)
.... ....... ......+.....+.++.+++.+||+.||.+|||++|+++
T Consensus 207 ----~~~~---~~~~~~~------------~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 256 (299)
T 3m2w_A 207 ----SPGM---KTRIRMG------------QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 256 (299)
T ss_dssp -----CCS---CCSSCTT------------CCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ----hHHH---HHHHhhc------------cccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 0000 0000000 000000011234567899999999999999999999987
No 290
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=1.4e-33 Score=338.91 Aligned_cols=136 Identities=13% Similarity=0.153 Sum_probs=92.9
Q ss_pred CcCcceEeeeccccccCCCccccccCCCCeeecccccCCCCCCCCCccccccchhhcccccCCCCCCccccCCCCCcEEE
Q 045798 125 CSRLTVLCIEYNKLQGRIPLEFVSLSKLKDLSLAKNKLTGGIPPFLGNLTSLEVLSLAGNSFGRNIPDSLGQLKQLKILA 204 (1008)
Q Consensus 125 l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 204 (1008)
+++++.|++++|.+....+..|.++++|++|+|++|.+++..|..|+++++|++|+|++|.+++..|..|+.+++|++|+
T Consensus 50 l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 129 (597)
T 3oja_B 50 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 129 (597)
T ss_dssp GCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEE
Confidence 56788888888888866666677788888888888888876667777778888888887777776677777777777777
Q ss_pred ecCCcccccCCccccCCCCcceeccccccccccCChhhhhcCCCCcEEEeccccCCCCCCcccccCCCCceeeccccccc
Q 045798 205 IGGNNLSGPIPPSIYNLSFLVVFSVSHNQIHGSLPPSLGLLLPNLKFFQIHHNFFSGSIPISLSNASKLEHIEIANNNFS 284 (1008)
Q Consensus 205 L~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 284 (1008)
|++|.+++..+..|.++++|++|+|++|.++ +..|..+..+++|++|++++|.++
T Consensus 130 L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~-------------------------~~~~~~~~~l~~L~~L~L~~N~l~ 184 (597)
T 3oja_B 130 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLE-------------------------RIEDDTFQATTSLQNLQLSSNRLT 184 (597)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-------------------------BCCTTTTTTCTTCCEEECTTSCCS
T ss_pred eeCCCCCCCCHHHhccCCCCCEEEeeCCcCC-------------------------CCChhhhhcCCcCcEEECcCCCCC
Confidence 7777776544444555555555555555544 344444555555555555555554
Q ss_pred c
Q 045798 285 G 285 (1008)
Q Consensus 285 ~ 285 (1008)
+
T Consensus 185 ~ 185 (597)
T 3oja_B 185 H 185 (597)
T ss_dssp B
T ss_pred C
Confidence 3
No 291
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=7.1e-33 Score=310.30 Aligned_cols=307 Identities=28% Similarity=0.392 Sum_probs=199.3
Q ss_pred ccCCccCCeeeecCCCCCCCCCccccCCCCCCEEEccCCCCCCccCcccccCcCcceEeeeccccccCCCccccccCCCC
Q 045798 74 LGNLSFLREINLSNNTIQGEIPPEFGRLFRLEALFLSNNSLVGKIPANLSYCSRLTVLCIEYNKLQGRIPLEFVSLSKLK 153 (1008)
Q Consensus 74 l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~ 153 (1008)
+..+++|++|++++|.++ .++ .+..+++|++|++++|++++..+ +..+++|++|++++|.+++ ++ .+..+++|+
T Consensus 40 ~~~l~~L~~L~l~~~~i~-~~~-~~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~-~~-~~~~l~~L~ 113 (347)
T 4fmz_A 40 QEELESITKLVVAGEKVA-SIQ-GIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITD-IS-ALQNLTNLR 113 (347)
T ss_dssp HHHHTTCSEEECCSSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCS
T ss_pred chhcccccEEEEeCCccc-cch-hhhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccC-ch-HHcCCCcCC
Confidence 345667777777777776 344 37777778888888777774333 7777777777777777774 33 577777777
Q ss_pred eeecccccCCCCCCCCCccccccchhhcccccCCCCCCccccCCCCCcEEEecCCcccccCCccccCCCCcceecccccc
Q 045798 154 DLSLAKNKLTGGIPPFLGNLTSLEVLSLAGNSFGRNIPDSLGQLKQLKILAIGGNNLSGPIPPSIYNLSFLVVFSVSHNQ 233 (1008)
Q Consensus 154 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ls~N~ 233 (1008)
+|++++|++++. +. +..+++|++|++++|......+ .+..+++|++|++++|.+.+..+ +..+++|+.|++++|.
T Consensus 114 ~L~l~~n~i~~~-~~-~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~ 188 (347)
T 4fmz_A 114 ELYLNEDNISDI-SP-LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQ 188 (347)
T ss_dssp EEECTTSCCCCC-GG-GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSC
T ss_pred EEECcCCcccCc-hh-hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCc
Confidence 777777777743 33 6677777777777775544333 37777777777777777764333 6666777777777776
Q ss_pred ccccCChhhhhcCCCCcEEEeccccCCCCCCcccccCCCCceeecccccccccccccccCCCcccccccccccCCCCCCC
Q 045798 234 IHGSLPPSLGLLLPNLKFFQIHHNFFSGSIPISLSNASKLEHIEIANNNFSGKLSVNFGGMKNLSLLNLQFSNLGSGESD 313 (1008)
Q Consensus 234 l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 313 (1008)
+. .++. +..+++|+.|++++|.+.+..+ +..+++|++|++++|++++..+ +.
T Consensus 189 l~-~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~--------------------- 240 (347)
T 4fmz_A 189 IE-DISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LA--------------------- 240 (347)
T ss_dssp CC-CCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GT---------------------
T ss_pred cc-cccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hh---------------------
Confidence 65 3333 3345666666666666664333 5566666666666666654333 33
Q ss_pred cccccccccccCCCcEEEecCCcCCccCChhhhhhcccceeeeeccccccCCCCCccccccccceEEecCccccCCcchh
Q 045798 314 EMGFMNSLTNCSKLRVLSLGGNQFRGALPHSIANLSSQLQILILSSNQFYGSIPLGIGNLVDLYLLGMVENQFTGAIPKE 393 (1008)
Q Consensus 314 ~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~ 393 (1008)
.+++|++|++++|.+++ + ..+..+. +|++|++++|.+++. ..+..+++|+.|++++|++++..+..
T Consensus 241 ---------~l~~L~~L~l~~n~l~~-~-~~~~~l~-~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~ 306 (347)
T 4fmz_A 241 ---------NLSQLTWLEIGTNQISD-I-NAVKDLT-KLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEV 306 (347)
T ss_dssp ---------TCTTCCEEECCSSCCCC-C-GGGTTCT-TCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHH
T ss_pred ---------cCCCCCEEECCCCccCC-C-hhHhcCC-CcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhH
Confidence 44445555555555542 2 2333333 366666666666532 34667777788888888877777777
Q ss_pred ccCCCCCceEEccCCcccccccccccCCCCcceeeccccccc
Q 045798 394 MGKLQKLQGLDFSGNHFSGEIPSSLGNLSSLYEVFFNNNNLS 435 (1008)
Q Consensus 394 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 435 (1008)
+..+++|+.|+|++|++++..| +..+++|++|++++|.|+
T Consensus 307 l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 307 IGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp HHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred hhccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 8888888888888888876555 777888888888888775
No 292
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=2.6e-32 Score=305.73 Aligned_cols=308 Identities=24% Similarity=0.374 Sum_probs=231.2
Q ss_pred cccCCCCCCEEEccCCCCCCccCcccccCcCcceEeeeccccccCCCccccccCCCCeeecccccCCCCCCCCCcccccc
Q 045798 97 EFGRLFRLEALFLSNNSLVGKIPANLSYCSRLTVLCIEYNKLQGRIPLEFVSLSKLKDLSLAKNKLTGGIPPFLGNLTSL 176 (1008)
Q Consensus 97 ~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 176 (1008)
.+..+++|++|++++|.+. .+| .+..+++|++|++++|++++..+ +..+++|++|++++|.++. + +.+.++++|
T Consensus 39 ~~~~l~~L~~L~l~~~~i~-~~~-~~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~-~-~~~~~l~~L 112 (347)
T 4fmz_A 39 TQEELESITKLVVAGEKVA-SIQ-GIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITD-I-SALQNLTNL 112 (347)
T ss_dssp CHHHHTTCSEEECCSSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-C-GGGTTCTTC
T ss_pred cchhcccccEEEEeCCccc-cch-hhhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccC-c-hHHcCCCcC
Confidence 4567889999999999988 445 38888999999999998885433 8888888888888888884 3 357788888
Q ss_pred chhhcccccCCCCCCccccCCCCCcEEEecCCcccccCCccccCCCCcceeccccccccccCChhhhhcCCCCcEEEecc
Q 045798 177 EVLSLAGNSFGRNIPDSLGQLKQLKILAIGGNNLSGPIPPSIYNLSFLVVFSVSHNQIHGSLPPSLGLLLPNLKFFQIHH 256 (1008)
Q Consensus 177 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~lp~~~~~~l~~L~~L~L~~ 256 (1008)
++|++++|.+.+..+ +..+++|+.|++++|..... +..+..+++|++|++++|.+. .++. +..+++|+.|++++
T Consensus 113 ~~L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~-~~~~~~l~~L~~L~l~~~~~~-~~~~--~~~l~~L~~L~l~~ 186 (347)
T 4fmz_A 113 RELYLNEDNISDISP--LANLTKMYSLNLGANHNLSD-LSPLSNMTGLNYLTVTESKVK-DVTP--IANLTDLYSLSLNY 186 (347)
T ss_dssp SEEECTTSCCCCCGG--GTTCTTCCEEECTTCTTCCC-CGGGTTCTTCCEEECCSSCCC-CCGG--GGGCTTCSEEECTT
T ss_pred CEEECcCCcccCchh--hccCCceeEEECCCCCCccc-ccchhhCCCCcEEEecCCCcC-Cchh--hccCCCCCEEEccC
Confidence 888888888865433 77788888888888755433 333667777777777777665 2322 23355555555555
Q ss_pred ccCCCCCCcccccCCCCceeecccccccccccccccCCCcccccccccccCCCCCCCcccccccccccCCCcEEEecCCc
Q 045798 257 NFFSGSIPISLSNASKLEHIEIANNNFSGKLSVNFGGMKNLSLLNLQFSNLGSGESDEMGFMNSLTNCSKLRVLSLGGNQ 336 (1008)
Q Consensus 257 N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~ 336 (1008)
|.+.+..+ +..+++|+.|++++| .+.... .+..+++|++|++++|+
T Consensus 187 n~l~~~~~--~~~l~~L~~L~l~~n------------------------~l~~~~--------~~~~~~~L~~L~l~~n~ 232 (347)
T 4fmz_A 187 NQIEDISP--LASLTSLHYFTAYVN------------------------QITDIT--------PVANMTRLNSLKIGNNK 232 (347)
T ss_dssp SCCCCCGG--GGGCTTCCEEECCSS------------------------CCCCCG--------GGGGCTTCCEEECCSSC
T ss_pred Cccccccc--ccCCCccceeecccC------------------------CCCCCc--------hhhcCCcCCEEEccCCc
Confidence 55543222 444444555554444 443322 25567788899999999
Q ss_pred CCccCChhhhhhcccceeeeeccccccCCCCCccccccccceEEecCccccCCcchhccCCCCCceEEccCCcccccccc
Q 045798 337 FRGALPHSIANLSSQLQILILSSNQFYGSIPLGIGNLVDLYLLGMVENQFTGAIPKEMGKLQKLQGLDFSGNHFSGEIPS 416 (1008)
Q Consensus 337 l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 416 (1008)
+++ ++. +..+. +|++|++++|.+++. ..+..+++|+.|++++|++++. +.+..+++|+.|+|++|++++..|.
T Consensus 233 l~~-~~~-~~~l~-~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~ 305 (347)
T 4fmz_A 233 ITD-LSP-LANLS-QLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDME 305 (347)
T ss_dssp CCC-CGG-GTTCT-TCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHH
T ss_pred cCC-Ccc-hhcCC-CCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChh
Confidence 884 343 66665 699999999999853 5689999999999999999975 5689999999999999999988999
Q ss_pred cccCCCCcceeeccccccccccCCCCcCCCcccEeeccccccc
Q 045798 417 SLGNLSSLYEVFFNNNNLSGVIPFSLGNLKRLAFLEMSGNELS 459 (1008)
Q Consensus 417 ~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 459 (1008)
.+..+++|++|++++|.+++..| +..+++|+.|++++|.++
T Consensus 306 ~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 306 VIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp HHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred HhhccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 99999999999999999998777 889999999999999986
No 293
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=5.3e-34 Score=317.63 Aligned_cols=196 Identities=21% Similarity=0.190 Sum_probs=160.0
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEecccc--------chhhHHHHHHHHHHhhcC---------CCCcee
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQC--------EGASKSFMAECKALKNIR---------HRNLVK 745 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~---------h~niv~ 745 (1008)
.++|++.+.||+|+||+||+|++ +|+.||||+++... ....+.+.+|++++++++ ||||++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~ 96 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG 96 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred cccchheeeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence 46789999999999999999998 68999999997542 223377899999999886 666666
Q ss_pred eeecc-----------------cc--------ccccCCceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHH
Q 045798 746 VITSC-----------------SS--------IDFQGNDFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRIS 800 (1008)
Q Consensus 746 ~~~~~-----------------~~--------~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~ 800 (1008)
+.+++ .. .++.+++..|+||||+++|++.+.+... .+++..++.
T Consensus 97 l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~~-----------~~~~~~~~~ 165 (336)
T 2vuw_A 97 LNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTK-----------LSSLATAKS 165 (336)
T ss_dssp EEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTTT-----------CCCHHHHHH
T ss_pred hcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHhc-----------CCCHHHHHH
Confidence 55542 21 0012367899999999999777766432 679999999
Q ss_pred HHHHHHHHHHHHh-hCCCCCceeccCCCCCeeecCCC--------------------CeEEcccCcccccccccCccccc
Q 045798 801 IAIDVASALDYLH-HHCQEPILHCDLKPSNILLDNDL--------------------SGHIGDFGLARFHQEVSNSTLSS 859 (1008)
Q Consensus 801 i~~qi~~~L~~LH-~~~~~~ivH~Dlkp~NIll~~~~--------------------~~kL~Dfg~a~~~~~~~~~~~~~ 859 (1008)
++.||+.||+||| +. +|+||||||+|||++.++ .+||+|||+|+.....
T Consensus 166 i~~qi~~aL~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~------- 235 (336)
T 2vuw_A 166 ILHQLTASLAVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------- 235 (336)
T ss_dssp HHHHHHHHHHHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-------
T ss_pred HHHHHHHHHHHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-------
Confidence 9999999999999 87 999999999999999887 8999999999865432
Q ss_pred cccccccccccCccccCCCCCCcccchhhHHHH-HHHHHhCCCCCC
Q 045798 860 SVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGIL-LLEMVTAKKPTD 904 (1008)
Q Consensus 860 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~v-l~elltG~~pf~ 904 (1008)
...||+.|+|||++.+.. +.++||||+|++ .+++++|..||.
T Consensus 236 --~~~gt~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~ 278 (336)
T 2vuw_A 236 --IVVFCDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYS 278 (336)
T ss_dssp --EEECCCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHH
T ss_pred --cEEEeecccChhhhcCCC-ccceehhhhhCCCCcccccccCCCc
Confidence 235899999999998766 889999998777 788888999974
No 294
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.98 E-value=3.5e-31 Score=294.23 Aligned_cols=293 Identities=23% Similarity=0.283 Sum_probs=179.6
Q ss_pred cCCeeeecCCCCCCCCCccccCCCCCCEEEccCCCCCCccCcccccCcCcceEeeeccccccCCCccccccCCCCeeecc
Q 045798 79 FLREINLSNNTIQGEIPPEFGRLFRLEALFLSNNSLVGKIPANLSYCSRLTVLCIEYNKLQGRIPLEFVSLSKLKDLSLA 158 (1008)
Q Consensus 79 ~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~ 158 (1008)
+|+.++++++.++ .+|..+. ++|++|+|++|.+++..|..|+++++|++|+|++|++++..|..|.++++|++|+++
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 110 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYIS 110 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECC
T ss_pred cCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECC
Confidence 4667777777776 5665553 577777777777776666677777777777777777777667777778888888888
Q ss_pred cccCCCCCCCCCccccccchhhcccccCCCCCCccccCCCCCcEEEecCCccc--ccCCccccCCCCcceeccccccccc
Q 045798 159 KNKLTGGIPPFLGNLTSLEVLSLAGNSFGRNIPDSLGQLKQLKILAIGGNNLS--GPIPPSIYNLSFLVVFSVSHNQIHG 236 (1008)
Q Consensus 159 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~--~~~~~~~~~l~~L~~L~ls~N~l~~ 236 (1008)
+|+++ .+|..+. ++|++|++++|++....+..|..+++|+.|++++|.++ +..+..+..+ +|+.|++++|+++
T Consensus 111 ~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~- 185 (332)
T 2ft3_A 111 KNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLT- 185 (332)
T ss_dssp SSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCS-
T ss_pred CCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCC-
Confidence 88877 5555554 67888888888887766677888888888888888885 3667777777 8888888888887
Q ss_pred cCChhhhhcCCCCcEEEeccccCCCCCCcccccCCCCceeecccccccccccccccCCCcccccccccccCCCCCCCccc
Q 045798 237 SLPPSLGLLLPNLKFFQIHHNFFSGSIPISLSNASKLEHIEIANNNFSGKLSVNFGGMKNLSLLNLQFSNLGSGESDEMG 316 (1008)
Q Consensus 237 ~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 316 (1008)
.+|..++ ++|++|++++|.+++..+..+..+++|++|++++|++.+..+..
T Consensus 186 ~l~~~~~---~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~-------------------------- 236 (332)
T 2ft3_A 186 GIPKDLP---ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGS-------------------------- 236 (332)
T ss_dssp SCCSSSC---SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTG--------------------------
T ss_pred ccCcccc---CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhH--------------------------
Confidence 4555432 45555555555555444455555555555555555555443333
Q ss_pred ccccccccCCCcEEEecCCcCCccCChhhhhhcccceeeeeccccccCCCCCccccccccceEEecCccccCCcchhccC
Q 045798 317 FMNSLTNCSKLRVLSLGGNQFRGALPHSIANLSSQLQILILSSNQFYGSIPLGIGNLVDLYLLGMVENQFTGAIPKEMGK 396 (1008)
Q Consensus 317 ~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 396 (1008)
+..+++|+.|++++|+++ .+|..+..+. +|++|++++|++++..+..|....- -..
T Consensus 237 ----~~~l~~L~~L~L~~N~l~-~lp~~l~~l~-~L~~L~l~~N~l~~~~~~~~~~~~~------------------~~~ 292 (332)
T 2ft3_A 237 ----LSFLPTLRELHLDNNKLS-RVPAGLPDLK-LLQVVYLHTNNITKVGVNDFCPVGF------------------GVK 292 (332)
T ss_dssp ----GGGCTTCCEEECCSSCCC-BCCTTGGGCT-TCCEEECCSSCCCBCCTTSSSCSSC------------------CSS
T ss_pred ----hhCCCCCCEEECCCCcCe-ecChhhhcCc-cCCEEECCCCCCCccChhHcccccc------------------ccc
Confidence 334444555555555554 4444444443 3555555555554333333322100 001
Q ss_pred CCCCceEEccCCccc--ccccccccCCCCcceeecccc
Q 045798 397 LQKLQGLDFSGNHFS--GEIPSSLGNLSSLYEVFFNNN 432 (1008)
Q Consensus 397 l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~l~~N 432 (1008)
..+|+.|++++|.+. +..|..|..+++|+.+++++|
T Consensus 293 ~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n 330 (332)
T 2ft3_A 293 RAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNY 330 (332)
T ss_dssp SCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC---
T ss_pred cccccceEeecCcccccccCcccccccchhhhhhcccc
Confidence 234555555555554 344555555555666655555
No 295
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.97 E-value=3e-31 Score=294.60 Aligned_cols=289 Identities=20% Similarity=0.233 Sum_probs=173.6
Q ss_pred CcceeccccccccccCChhhhhcCCCCcEEEeccccCCCCCCcccccCCCCceeecccccccccccccccCCCccccccc
Q 045798 223 FLVVFSVSHNQIHGSLPPSLGLLLPNLKFFQIHHNFFSGSIPISLSNASKLEHIEIANNNFSGKLSVNFGGMKNLSLLNL 302 (1008)
Q Consensus 223 ~L~~L~ls~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 302 (1008)
+++.++++++.++ .+|..+ .++|++|+|++|.+++..+..+.++++|++|++++|++++..+..|.++++|+.|++
T Consensus 32 ~l~~l~~~~~~l~-~lp~~~---~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (330)
T 1xku_A 32 HLRVVQCSDLGLE-KVPKDL---PPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYL 107 (330)
T ss_dssp ETTEEECTTSCCC-SCCCSC---CTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEEC
T ss_pred CCeEEEecCCCcc-ccCccC---CCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEEC
Confidence 4555666666655 555443 246677777777777655566777777777777777777766666766666666666
Q ss_pred ccccCCCCCCCcccccccccccCCCcEEEecCCcCCccCChhhhhhcccceeeeeccccccC--CCCCccccccccceEE
Q 045798 303 QFSNLGSGESDEMGFMNSLTNCSKLRVLSLGGNQFRGALPHSIANLSSQLQILILSSNQFYG--SIPLGIGNLVDLYLLG 380 (1008)
Q Consensus 303 ~~n~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~ 380 (1008)
++|+++.++.. + .++|++|++++|++++..+..+..+. +|++|++++|.+.. ..+..+..+++|+.|+
T Consensus 108 s~n~l~~l~~~-------~--~~~L~~L~l~~n~l~~~~~~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~ 177 (330)
T 1xku_A 108 SKNQLKELPEK-------M--PKTLQELRVHENEITKVRKSVFNGLN-QMIVVELGTNPLKSSGIENGAFQGMKKLSYIR 177 (330)
T ss_dssp CSSCCSBCCSS-------C--CTTCCEEECCSSCCCBBCHHHHTTCT-TCCEEECCSSCCCGGGBCTTGGGGCTTCCEEE
T ss_pred CCCcCCccChh-------h--cccccEEECCCCcccccCHhHhcCCc-cccEEECCCCcCCccCcChhhccCCCCcCEEE
Confidence 66666544322 1 14667777777777654444555554 47777777776642 4555566666666666
Q ss_pred ecCccccCCcchhccCCCCCceEEccCCcccccccccccCCCCcceeeccccccccccCCCCcCCCcccEeecccccccC
Q 045798 381 MVENQFTGAIPKEMGKLQKLQGLDFSGNHFSGEIPSSLGNLSSLYEVFFNNNNLSGVIPFSLGNLKRLAFLEMSGNELSG 460 (1008)
Q Consensus 381 L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 460 (1008)
+++|+++. +|..+. ++|+.|+|++|++++..|..+..+++|+.|++++|.+++..+..|..+++|+.|+|++|+++
T Consensus 178 l~~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~- 253 (330)
T 1xku_A 178 IADTNITT-IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV- 253 (330)
T ss_dssp CCSSCCCS-CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-
T ss_pred CCCCcccc-CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-
Confidence 66666663 333332 56666666666666555566666666666666666666555556666666666666666665
Q ss_pred CcchhhhhhhhhhhhhcccCccccCCCcccccccccccccccccccccCCCCccccc------ccccceeeccCccccc-
Q 045798 461 TIPEDIFNISYLSNSLNLARNHLVGIIPPRIGNLRALRSFDVSNNDLSGEIPIELGH------CSSLEEIYLAGNLFHG- 533 (1008)
Q Consensus 461 ~lp~~~~~~~~~~~~L~L~~N~l~~~~p~~~~~l~~L~~Ldls~N~l~~~~p~~~~~------l~~L~~L~L~~N~l~~- 533 (1008)
.+|..+..+++|+.|++++|.+++..+..|.. ...|+.|++++|++..
T Consensus 254 -------------------------~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~ 308 (330)
T 1xku_A 254 -------------------------KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYW 308 (330)
T ss_dssp -------------------------SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGG
T ss_pred -------------------------cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCccccc
Confidence 34445555666666666666666444444432 2556666666666642
Q ss_pred -chhhhhhccccccEEecCCCc
Q 045798 534 -SIPSFFNALKGVQKIDLSRNN 554 (1008)
Q Consensus 534 -~~p~~~~~l~~L~~L~ls~N~ 554 (1008)
..|..|..+..|+.++|++|+
T Consensus 309 ~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 309 EIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp GSCGGGGTTCCCGGGEEC----
T ss_pred ccCccccccccceeEEEecccC
Confidence 345566666666666666663
No 296
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=4.4e-35 Score=342.06 Aligned_cols=386 Identities=17% Similarity=0.139 Sum_probs=236.7
Q ss_pred cccchhhcccccCCCCCCcc-ccCCCCCcEEEecCCcccc----cCCccccCCCCcceeccccccccccCChhhhhcCC-
Q 045798 174 TSLEVLSLAGNSFGRNIPDS-LGQLKQLKILAIGGNNLSG----PIPPSIYNLSFLVVFSVSHNQIHGSLPPSLGLLLP- 247 (1008)
Q Consensus 174 ~~L~~L~L~~n~l~~~~~~~-~~~l~~L~~L~L~~n~l~~----~~~~~~~~l~~L~~L~ls~N~l~~~lp~~~~~~l~- 247 (1008)
++|++|+|++|+++...... +..+++|++|++++|.+++ .++..+..+++|++|++++|.+.+..+..++..++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 45566666666654333222 5566666677777666653 23455666677777777777766444455555555
Q ss_pred ---CCcEEEeccccCCC----CCCcccccCCCCceeeccccccccccccccc-----CCCcccccccccccCCCCCCCcc
Q 045798 248 ---NLKFFQIHHNFFSG----SIPISLSNASKLEHIEIANNNFSGKLSVNFG-----GMKNLSLLNLQFSNLGSGESDEM 315 (1008)
Q Consensus 248 ---~L~~L~L~~N~l~~----~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~-----~l~~L~~L~L~~n~l~~~~~~~~ 315 (1008)
+|++|+|++|.+.. .++..+..+++|++|++++|.+.+..+..+. ..++|+.|++++|+++.... .
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~--~ 160 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASC--E 160 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGH--H
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHH--H
Confidence 57777777777763 4467777788888888888887655443332 24456666666666554221 1
Q ss_pred cccccccccCCCcEEEecCCcCCccCChhhhhh----cccceeeeeccccccCC----CCCccccccccceEEecCcccc
Q 045798 316 GFMNSLTNCSKLRVLSLGGNQFRGALPHSIANL----SSQLQILILSSNQFYGS----IPLGIGNLVDLYLLGMVENQFT 387 (1008)
Q Consensus 316 ~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l----~~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~n~l~ 387 (1008)
.+...+..+++|+.|++++|.+....+..+... ..+|++|++++|.+++. ++..+..+++|+.|++++|.+.
T Consensus 161 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~ 240 (461)
T 1z7x_W 161 PLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLG 240 (461)
T ss_dssp HHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCH
T ss_pred HHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCC
Confidence 223345566777777777777764444433321 12577777777766642 3445555666666666666665
Q ss_pred CCc-----chhccCCCCCceEEccCCccccc----ccccccCCCCcceeeccccccccccCCCCcC-----CCcccEeec
Q 045798 388 GAI-----PKEMGKLQKLQGLDFSGNHFSGE----IPSSLGNLSSLYEVFFNNNNLSGVIPFSLGN-----LKRLAFLEM 453 (1008)
Q Consensus 388 ~~~-----~~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~-----l~~L~~L~L 453 (1008)
+.. +..+..+++|+.|+|++|++++. ++..+..+++|++|++++|.+....+..+.. .++|+.|+|
T Consensus 241 ~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L 320 (461)
T 1z7x_W 241 DVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWV 320 (461)
T ss_dssp HHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEEC
T ss_pred hHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEc
Confidence 432 22223456666666666666542 4455555666666666666665433322222 245666666
Q ss_pred ccccccCCcchhhhhhhhhhhhhcccCccccCCCcccccccccccccccccccccCCCCccccc-----ccccceeeccC
Q 045798 454 SGNELSGTIPEDIFNISYLSNSLNLARNHLVGIIPPRIGNLRALRSFDVSNNDLSGEIPIELGH-----CSSLEEIYLAG 528 (1008)
Q Consensus 454 s~N~l~~~lp~~~~~~~~~~~~L~L~~N~l~~~~p~~~~~l~~L~~Ldls~N~l~~~~p~~~~~-----l~~L~~L~L~~ 528 (1008)
++|.+++.... .++..+..+++|+.|||++|.+++..+..+.. .++|++|+|++
T Consensus 321 ~~n~l~~~~~~---------------------~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~ 379 (461)
T 1z7x_W 321 KSCSFTAACCS---------------------HFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLAD 379 (461)
T ss_dssp TTSCCBGGGHH---------------------HHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTT
T ss_pred CCCCCchHHHH---------------------HHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCC
Confidence 66665521000 24566777889999999999988665555543 67999999999
Q ss_pred ccccc----chhhhhhccccccEEecCCCcccccccCc------ccccccceeecccCcccccC
Q 045798 529 NLFHG----SIPSFFNALKGVQKIDLSRNNLSGQIPIF------LEALSLEYLNLSFNDFEGKI 582 (1008)
Q Consensus 529 N~l~~----~~p~~~~~l~~L~~L~ls~N~l~~~~p~~------~~~~~L~~L~l~~N~l~g~~ 582 (1008)
|++++ .+|..+..+++|+.|||++|++++.-... .....|+.|++.+|.+....
T Consensus 380 n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~~~~~l~~~l~~~~~~L~~L~~~~~~~~~~~ 443 (461)
T 1z7x_W 380 CDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWSEEM 443 (461)
T ss_dssp SCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHHHHHHHHHHHTSTTCCCCEEECTTCCCCHHH
T ss_pred CCCChhhHHHHHHHHHhCCCccEEECCCCCCCHHHHHHHHHHhccCCcchhheeecccccCHHH
Confidence 99986 78899999999999999999988642111 11235777777777665543
No 297
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.97 E-value=4.3e-31 Score=293.32 Aligned_cols=179 Identities=22% Similarity=0.290 Sum_probs=100.7
Q ss_pred CCCEEEccCCCCCCccCcccccCcCcceEeeeccccccCCCccccccCCCCeeecccccCCCCCCCCCccccccchhhcc
Q 045798 103 RLEALFLSNNSLVGKIPANLSYCSRLTVLCIEYNKLQGRIPLEFVSLSKLKDLSLAKNKLTGGIPPFLGNLTSLEVLSLA 182 (1008)
Q Consensus 103 ~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 182 (1008)
+|++|+|++|++++..+..|+++++|++|+|++|++++..|..|.++++|++|++++|+++ .+|..+. ++|++|+++
T Consensus 53 ~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l~ 129 (330)
T 1xku_A 53 DTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRVH 129 (330)
T ss_dssp TCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEECC
T ss_pred CCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc--ccccEEECC
Confidence 4444444444444433334444444444444444444444445555555555555555555 3343333 456666666
Q ss_pred cccCCCCCCccccCCCCCcEEEecCCcccc--cCCccccCCCCcceeccccccccccCChhhhhcCCCCcEEEeccccCC
Q 045798 183 GNSFGRNIPDSLGQLKQLKILAIGGNNLSG--PIPPSIYNLSFLVVFSVSHNQIHGSLPPSLGLLLPNLKFFQIHHNFFS 260 (1008)
Q Consensus 183 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~--~~~~~~~~l~~L~~L~ls~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~ 260 (1008)
+|++++..+..|..+++|+.|++++|.++. ..+..+.++++|++|++++|.++ .+|..++ ++|++|++++|.++
T Consensus 130 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~-~l~~~~~---~~L~~L~l~~n~l~ 205 (330)
T 1xku_A 130 ENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLP---PSLTELHLDGNKIT 205 (330)
T ss_dssp SSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSCC---TTCSEEECTTSCCC
T ss_pred CCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc-cCCcccc---ccCCEEECCCCcCC
Confidence 666655555566666777777777776642 55566666677777777777666 4554432 46666666666666
Q ss_pred CCCCcccccCCCCceeeccccccccccc
Q 045798 261 GSIPISLSNASKLEHIEIANNNFSGKLS 288 (1008)
Q Consensus 261 ~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 288 (1008)
+..|..+..+++|++|++++|++++..+
T Consensus 206 ~~~~~~~~~l~~L~~L~Ls~n~l~~~~~ 233 (330)
T 1xku_A 206 KVDAASLKGLNNLAKLGLSFNSISAVDN 233 (330)
T ss_dssp EECTGGGTTCTTCCEEECCSSCCCEECT
T ss_pred ccCHHHhcCCCCCCEEECCCCcCceeCh
Confidence 5555556666666666666666554443
No 298
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.97 E-value=2.4e-31 Score=295.52 Aligned_cols=288 Identities=20% Similarity=0.221 Sum_probs=178.8
Q ss_pred CCCeeecccccCCCCCCCCCccccccchhhcccccCCCCCCccccCCCCCcEEEecCCcccccCCccccCCCCcceeccc
Q 045798 151 KLKDLSLAKNKLTGGIPPFLGNLTSLEVLSLAGNSFGRNIPDSLGQLKQLKILAIGGNNLSGPIPPSIYNLSFLVVFSVS 230 (1008)
Q Consensus 151 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ls 230 (1008)
+|+.+++++|.++ .+|..+. ++|+.|++++|.+.+..+..|..+++|++|++++|.+++..|..|.++++|++|+++
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 110 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYIS 110 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECC
T ss_pred cCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECC
Confidence 4555566655555 4444443 456666666666655555566666666666666666666556666666666666666
Q ss_pred cccccccCChhhhhcCCCCcEEEeccccCCCCCCcccccCCCCceeecccccccc--cccccccCCCcccccccccccCC
Q 045798 231 HNQIHGSLPPSLGLLLPNLKFFQIHHNFFSGSIPISLSNASKLEHIEIANNNFSG--KLSVNFGGMKNLSLLNLQFSNLG 308 (1008)
Q Consensus 231 ~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~L~~n~l~ 308 (1008)
+|+++ .+|..++ ++|++|++++|.+.+..+..+.++++|++|++++|.+.. ..+..|..+ +|+.|++++|+++
T Consensus 111 ~n~l~-~l~~~~~---~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~ 185 (332)
T 2ft3_A 111 KNHLV-EIPPNLP---SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLT 185 (332)
T ss_dssp SSCCC-SCCSSCC---TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCS
T ss_pred CCcCC-ccCcccc---ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCC
Confidence 66665 5555543 567777777777765555566777777777777777753 555556665 6666666666665
Q ss_pred CCCCCcccccccccccCCCcEEEecCCcCCccCChhhhhhcccceeeeeccccccCCCCCccccccccceEEecCccccC
Q 045798 309 SGESDEMGFMNSLTNCSKLRVLSLGGNQFRGALPHSIANLSSQLQILILSSNQFYGSIPLGIGNLVDLYLLGMVENQFTG 388 (1008)
Q Consensus 309 ~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~ 388 (1008)
.++.. + .++|+.|++++|++++..+..+..+. +|++|+|++|++++..+..+..+++|+.|++++|+++
T Consensus 186 ~l~~~-------~--~~~L~~L~l~~n~i~~~~~~~l~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~- 254 (332)
T 2ft3_A 186 GIPKD-------L--PETLNELHLDHNKIQAIELEDLLRYS-KLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS- 254 (332)
T ss_dssp SCCSS-------S--CSSCSCCBCCSSCCCCCCTTSSTTCT-TCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-
T ss_pred ccCcc-------c--cCCCCEEECCCCcCCccCHHHhcCCC-CCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-
Confidence 54322 1 14566666666666655555565554 4777777777776665666667777777777777776
Q ss_pred CcchhccCCCCCceEEccCCcccccccccccCC------CCcceeeccccccc--cccCCCCcCCCcccEeeccccc
Q 045798 389 AIPKEMGKLQKLQGLDFSGNHFSGEIPSSLGNL------SSLYEVFFNNNNLS--GVIPFSLGNLKRLAFLEMSGNE 457 (1008)
Q Consensus 389 ~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l------~~L~~L~l~~N~l~--~~~p~~~~~l~~L~~L~Ls~N~ 457 (1008)
.+|..+..+++|+.|+|++|++++..+..|... .+|+.|++++|.+. +..|..|..+++|+.|++++|+
T Consensus 255 ~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 255 RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred ecChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 566667777777777777777765555555432 45667777777665 4556666667777777776664
No 299
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=4.8e-35 Score=341.74 Aligned_cols=356 Identities=19% Similarity=0.157 Sum_probs=210.2
Q ss_pred cCCeeeecCCCCCCCCCcc-ccCCCCCCEEEccCCCCCC----ccCcccccCcCcceEeeeccccccCCCcccc-ccC--
Q 045798 79 FLREINLSNNTIQGEIPPE-FGRLFRLEALFLSNNSLVG----KIPANLSYCSRLTVLCIEYNKLQGRIPLEFV-SLS-- 150 (1008)
Q Consensus 79 ~L~~L~L~~n~~~~~~p~~-~~~l~~L~~L~Ls~n~l~~----~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~-~l~-- 150 (1008)
.|++|+|++|+++...... +..+++|++|+|++|++++ .++..+..+++|++|+|++|.+.+..+..+. .++
T Consensus 4 ~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~ 83 (461)
T 1z7x_W 4 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTP 83 (461)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCST
T ss_pred cceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhC
Confidence 4555555555554322222 4455555555555555552 2344455555566666666555543333322 233
Q ss_pred --CCCeeecccccCCC----CCCCCCccccccchhhcccccCCCCCCcccc-----CCCCCcEEEecCCcccccC----C
Q 045798 151 --KLKDLSLAKNKLTG----GIPPFLGNLTSLEVLSLAGNSFGRNIPDSLG-----QLKQLKILAIGGNNLSGPI----P 215 (1008)
Q Consensus 151 --~L~~L~L~~n~l~~----~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~-----~l~~L~~L~L~~n~l~~~~----~ 215 (1008)
+|++|+|++|+++. .++..+..+++|++|+|++|.++...+..+. ..++|++|++++|.+++.. +
T Consensus 84 ~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~ 163 (461)
T 1z7x_W 84 SCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLA 163 (461)
T ss_dssp TCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHH
T ss_pred CCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHH
Confidence 46666666666552 2355555666666666666665433232222 2456777777777776532 4
Q ss_pred ccccCCCCcceeccccccccccCChhhhh----cCCCCcEEEeccccCCCC----CCcccccCCCCceeecccccccccc
Q 045798 216 PSIYNLSFLVVFSVSHNQIHGSLPPSLGL----LLPNLKFFQIHHNFFSGS----IPISLSNASKLEHIEIANNNFSGKL 287 (1008)
Q Consensus 216 ~~~~~l~~L~~L~ls~N~l~~~lp~~~~~----~l~~L~~L~L~~N~l~~~----~p~~l~~l~~L~~L~L~~N~l~~~~ 287 (1008)
..+..+++|++|++++|.+.+..+..+.. ..++|++|+|++|.+++. ++..+..+++|++|++++|++.+..
T Consensus 164 ~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~ 243 (461)
T 1z7x_W 164 SVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVG 243 (461)
T ss_dssp HHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHH
T ss_pred HHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHH
Confidence 45556677777777777766433333322 345788888888877753 4666677788888888888877543
Q ss_pred -----cccccCCCcccccccccccCCCCCCCcccccccccccCCCcEEEecCCcCCccCChhhhhhc----ccceeeeec
Q 045798 288 -----SVNFGGMKNLSLLNLQFSNLGSGESDEMGFMNSLTNCSKLRVLSLGGNQFRGALPHSIANLS----SQLQILILS 358 (1008)
Q Consensus 288 -----~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~----~~L~~L~Ls 358 (1008)
+..+..+++|+.|++++|+++..+.. .++..+..+++|++|++++|.+.+..+..+.... .+|++|+|+
T Consensus 244 ~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~--~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~ 321 (461)
T 1z7x_W 244 MAELCPGLLHPSSRLRTLWIWECGITAKGCG--DLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVK 321 (461)
T ss_dssp HHHHHHHHTSTTCCCCEEECTTSCCCHHHHH--HHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECT
T ss_pred HHHHHHHHhcCCCCceEEECcCCCCCHHHHH--HHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcC
Confidence 22233567777777777766542211 1334556677888888888877654444444331 257777777
Q ss_pred cccccCC----CCCccccccccceEEecCccccCCcchhccC-----CCCCceEEccCCcccc----cccccccCCCCcc
Q 045798 359 SNQFYGS----IPLGIGNLVDLYLLGMVENQFTGAIPKEMGK-----LQKLQGLDFSGNHFSG----EIPSSLGNLSSLY 425 (1008)
Q Consensus 359 ~N~l~~~----~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~-----l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~ 425 (1008)
+|.+++. ++..+..+++|+.|++++|++++..+..+.. .++|+.|+|++|++++ .+|..+..+++|+
T Consensus 322 ~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~ 401 (461)
T 1z7x_W 322 SCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLR 401 (461)
T ss_dssp TSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCC
T ss_pred CCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCcc
Confidence 7777644 3445556677777777777776554444432 5577777777777764 5666666677777
Q ss_pred eeecccccccc
Q 045798 426 EVFFNNNNLSG 436 (1008)
Q Consensus 426 ~L~l~~N~l~~ 436 (1008)
+|++++|.+++
T Consensus 402 ~L~l~~N~i~~ 412 (461)
T 1z7x_W 402 ELDLSNNCLGD 412 (461)
T ss_dssp EEECCSSSCCH
T ss_pred EEECCCCCCCH
Confidence 77777777664
No 300
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=1.8e-30 Score=291.07 Aligned_cols=261 Identities=21% Similarity=0.233 Sum_probs=208.0
Q ss_pred CCCCCCCCCCcccceEEcCCCCeEEEEeccccCCCCccCcCccCCccCCeeeecCCCCCCCCCccccCCCCCCEEEccCC
Q 045798 33 NSWNDSRHFCEWEGITCGRRHRRVTALDLMSKSLSGSLSPHLGNLSFLREINLSNNTIQGEIPPEFGRLFRLEALFLSNN 112 (1008)
Q Consensus 33 ~~w~~~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~~~l~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n 112 (1008)
..|....+.|.|.|+ |+ .++++++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|
T Consensus 21 ~~~~~~~~~C~~~~~-c~----------~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n 86 (353)
T 2z80_A 21 ESSNQASLSCDRNGI-CK----------GSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSN 86 (353)
T ss_dssp ------CCEECTTSE-EE----------CCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTS
T ss_pred cCCCccCCCCCCCeE-ee----------CCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCC
Confidence 356667788999887 64 3456666 6777665 48999999999999777779999999999999999
Q ss_pred CCCCccCcccccCcCcceEeeeccccccCCCccccccCCCCeeecccccCCCCCC-CCCccccccchhhcccc-cCCCCC
Q 045798 113 SLVGKIPANLSYCSRLTVLCIEYNKLQGRIPLEFVSLSKLKDLSLAKNKLTGGIP-PFLGNLTSLEVLSLAGN-SFGRNI 190 (1008)
Q Consensus 113 ~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n-~l~~~~ 190 (1008)
++++..|..|+++++|++|+|++|++++..+..|.++++|++|++++|++++..+ ..+.++++|++|++++| .+....
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~ 166 (353)
T 2z80_A 87 GINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQ 166 (353)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEEC
T ss_pred ccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccC
Confidence 9998888999999999999999999997666669999999999999999995433 48999999999999999 577777
Q ss_pred CccccCCCCCcEEEecCCcccccCCccccCCCCcceeccccccccccCChhhhhcCCCCcEEEeccccCCCCCCcccc--
Q 045798 191 PDSLGQLKQLKILAIGGNNLSGPIPPSIYNLSFLVVFSVSHNQIHGSLPPSLGLLLPNLKFFQIHHNFFSGSIPISLS-- 268 (1008)
Q Consensus 191 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~-- 268 (1008)
+..|..+++|++|++++|.+++..|..+..+++|++|++++|++. .+|..++..+++|+.|++++|.+++..+..+.
T Consensus 167 ~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~-~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 245 (353)
T 2z80_A 167 RKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHI-LLLEIFVDVTSSVECLELRDTDLDTFHFSELSTG 245 (353)
T ss_dssp TTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCST-THHHHHHHHTTTEEEEEEESCBCTTCCCC-----
T ss_pred HHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccc-cchhhhhhhcccccEEECCCCccccccccccccc
Confidence 889999999999999999999999999999999999999999996 78888887789999999999999976555443
Q ss_pred -cCCCCceeeccccccccc----ccccccCCCcccccccccccCC
Q 045798 269 -NASKLEHIEIANNNFSGK----LSVNFGGMKNLSLLNLQFSNLG 308 (1008)
Q Consensus 269 -~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~L~~n~l~ 308 (1008)
....++.++++++.+.+. .+..+..+++|+.|++++|+++
T Consensus 246 ~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~ 290 (353)
T 2z80_A 246 ETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLK 290 (353)
T ss_dssp -CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCC
T ss_pred cccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCC
Confidence 345666677777666542 2333444444444444444444
No 301
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=3.3e-29 Score=274.91 Aligned_cols=240 Identities=21% Similarity=0.261 Sum_probs=191.3
Q ss_pred CCCCCcccceEEcCCCCeEEEEeccccCCCCccCcCccCCccCCeeeecCCCCCCCCCccccCCCCCCEEEccCCCCCCc
Q 045798 38 SRHFCEWEGITCGRRHRRVTALDLMSKSLSGSLSPHLGNLSFLREINLSNNTIQGEIPPEFGRLFRLEALFLSNNSLVGK 117 (1008)
Q Consensus 38 ~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~~~l~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~ 117 (1008)
..+.|.|.++.|.. ++++ .+|..+. ++|++|+|++|+++...+..|.++++|++|+|++|.++..
T Consensus 3 ~~C~C~~~~l~c~~------------~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~ 67 (306)
T 2z66_A 3 SRCSCSGTEIRCNS------------KGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFK 67 (306)
T ss_dssp TTCEEETTEEECCS------------SCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEE
T ss_pred CCCeeCCCEEEcCC------------CCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcc
Confidence 34668898888854 2344 4565543 6899999999999955555689999999999999999833
Q ss_pred --cCcccccCcCcceEeeeccccccCCCccccccCCCCeeecccccCCCCCC-CCCccccccchhhcccccCCCCCCccc
Q 045798 118 --IPANLSYCSRLTVLCIEYNKLQGRIPLEFVSLSKLKDLSLAKNKLTGGIP-PFLGNLTSLEVLSLAGNSFGRNIPDSL 194 (1008)
Q Consensus 118 --~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~ 194 (1008)
.|..+..+++|++|+|++|.+. .+|..+..+++|++|++++|++++..+ ..+..+++|++|++++|.+.+..+..|
T Consensus 68 ~~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 146 (306)
T 2z66_A 68 GCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIF 146 (306)
T ss_dssp EEEEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTT
T ss_pred cCcccccccccccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhc
Confidence 3677888999999999999998 577789999999999999999996554 578899999999999999988888889
Q ss_pred cCCCCCcEEEecCCcccc-cCCccccCCCCcceeccccccccccCChhhhhcCCCCcEEEeccccCCCCCCcccccCCCC
Q 045798 195 GQLKQLKILAIGGNNLSG-PIPPSIYNLSFLVVFSVSHNQIHGSLPPSLGLLLPNLKFFQIHHNFFSGSIPISLSNASKL 273 (1008)
Q Consensus 195 ~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~ls~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L 273 (1008)
..+++|++|++++|.+++ ..|..+..+++|++|++++|++++..|. .+..+++|++|+|++|.+++..+..+..+++|
T Consensus 147 ~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 225 (306)
T 2z66_A 147 NGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPT-AFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSL 225 (306)
T ss_dssp TTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTT-TTTTCTTCCEEECTTSCCSBCCSGGGTTCTTC
T ss_pred ccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHH-HhcCCCCCCEEECCCCccCccChhhccCcccC
Confidence 999999999999999986 5788888888888888888888744343 33447778888888887776666667777777
Q ss_pred ceeecccccccccccccccCC
Q 045798 274 EHIEIANNNFSGKLSVNFGGM 294 (1008)
Q Consensus 274 ~~L~L~~N~l~~~~~~~~~~l 294 (1008)
++|++++|++.+..+..+..+
T Consensus 226 ~~L~L~~N~l~~~~~~~~~~~ 246 (306)
T 2z66_A 226 QVLDYSLNHIMTSKKQELQHF 246 (306)
T ss_dssp CEEECTTSCCCBCSSSSCCCC
T ss_pred CEeECCCCCCcccCHHHHHhh
Confidence 777777777776665555443
No 302
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.96 E-value=1.3e-31 Score=323.36 Aligned_cols=435 Identities=15% Similarity=0.134 Sum_probs=213.8
Q ss_pred CCcccceEEcCCCCeEEEEeccccCCCCccCcCccCCccCCeeeecCCCC---CCCCCcccc------------CCCCCC
Q 045798 41 FCEWEGITCGRRHRRVTALDLMSKSLSGSLSPHLGNLSFLREINLSNNTI---QGEIPPEFG------------RLFRLE 105 (1008)
Q Consensus 41 ~c~w~gv~c~~~~~~v~~l~l~~~~l~~~l~~~l~~l~~L~~L~L~~n~~---~~~~p~~~~------------~l~~L~ 105 (1008)
|++|.++.+... .++ .+.. ......+..+..+++|++|+|+++.. .+.+|..++ .+++|+
T Consensus 41 ck~W~~~~~~~~-~~l---~~~~-~~~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~ 115 (592)
T 3ogk_B 41 CRRWFKIDSETR-EHV---TMAL-CYTATPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLK 115 (592)
T ss_dssp CHHHHHHHHHHC-CEE---EESC-GGGSCHHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCC
T ss_pred hHHHHHhhhccc-cEE---EEee-ccccChHHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCC
Confidence 458998854322 122 2221 12223344556778889999877532 124444333 566677
Q ss_pred EEEccCCCCCCccCcccccC--cCcceEeeeccc-ccc-CCCccccccCCCCeeecccccCCCCCCCCCccccccchhhc
Q 045798 106 ALFLSNNSLVGKIPANLSYC--SRLTVLCIEYNK-LQG-RIPLEFVSLSKLKDLSLAKNKLTGGIPPFLGNLTSLEVLSL 181 (1008)
Q Consensus 106 ~L~Ls~n~l~~~~p~~l~~l--~~L~~L~Ls~n~-l~~-~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 181 (1008)
+|+|++|.+++..+..++.. .+|++|+|++|. ++. .++....++++|++|+|++|.+++....+
T Consensus 116 ~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~------------ 183 (592)
T 3ogk_B 116 SVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKW------------ 183 (592)
T ss_dssp EEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHH------------
T ss_pred eEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhH------------
Confidence 77777766665555555543 336666666665 211 11122234556666666666554331110
Q ss_pred ccccCCCCCCccccCCCCCcEEEecCCccc----ccCCccccCCCCcceeccccccccccCChhhhhcCCCCcEEEeccc
Q 045798 182 AGNSFGRNIPDSLGQLKQLKILAIGGNNLS----GPIPPSIYNLSFLVVFSVSHNQIHGSLPPSLGLLLPNLKFFQIHHN 257 (1008)
Q Consensus 182 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~----~~~~~~~~~l~~L~~L~ls~N~l~~~lp~~~~~~l~~L~~L~L~~N 257 (1008)
++..+..+++|+.|++++|.++ +.++..+.++++|+.|++++|.+. .+|. .+..+++|+.|+++++
T Consensus 184 --------l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~-~l~~-~~~~~~~L~~L~l~~~ 253 (592)
T 3ogk_B 184 --------LHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEIL-ELVG-FFKAAANLEEFCGGSL 253 (592)
T ss_dssp --------HHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGG-GGHH-HHHHCTTCCEEEECBC
T ss_pred --------HHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHH-HHHH-HHhhhhHHHhhccccc
Confidence 1112233444444444444443 122223334445555555555444 2332 2223455555555432
Q ss_pred cCC---CCCCcccccCCCCceeecccccccccccccccCCCcccccccccccCCCCCCCcccccccccccCCCcEEEecC
Q 045798 258 FFS---GSIPISLSNASKLEHIEIANNNFSGKLSVNFGGMKNLSLLNLQFSNLGSGESDEMGFMNSLTNCSKLRVLSLGG 334 (1008)
Q Consensus 258 ~l~---~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~ 334 (1008)
... ...+..+..+++|+.|+++++... ..+..+..+++|+.|+|++|.++... +...+..+++|+.|+++
T Consensus 254 ~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~-~l~~~~~~~~~L~~L~Ls~~~l~~~~-----~~~~~~~~~~L~~L~L~- 326 (592)
T 3ogk_B 254 NEDIGMPEKYMNLVFPRKLCRLGLSYMGPN-EMPILFPFAAQIRKLDLLYALLETED-----HCTLIQKCPNLEVLETR- 326 (592)
T ss_dssp CCCTTCTTSSSCCCCCTTCCEEEETTCCTT-TGGGGGGGGGGCCEEEETTCCCCHHH-----HHHHHTTCTTCCEEEEE-
T ss_pred ccccchHHHHHHhhccccccccCccccchh-HHHHHHhhcCCCcEEecCCCcCCHHH-----HHHHHHhCcCCCEEecc-
Confidence 211 122334455555665555553221 22333333334444444433321110 11112344444444444
Q ss_pred CcCCccCChhhhhhcccceeeeeccccccCCCCCccccccccceEEecC-----------ccccCC-cchhccCCCCCce
Q 045798 335 NQFRGALPHSIANLSSQLQILILSSNQFYGSIPLGIGNLVDLYLLGMVE-----------NQFTGA-IPKEMGKLQKLQG 402 (1008)
Q Consensus 335 N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~-----------n~l~~~-~~~~~~~l~~L~~ 402 (1008)
+.+. .+.++..+..+++|+.|++++ |.+++. ++..+..+++|++
T Consensus 327 ~~~~------------------------~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~ 382 (592)
T 3ogk_B 327 NVIG------------------------DRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEY 382 (592)
T ss_dssp GGGH------------------------HHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSE
T ss_pred CccC------------------------HHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeE
Confidence 2222 111122223334444444441 333322 1122334566666
Q ss_pred EEccCCcccccccccccC-CCCcceeecc----ccccccc-----cCCCCcCCCcccEeeccccc--ccCCcchhhhhhh
Q 045798 403 LDFSGNHFSGEIPSSLGN-LSSLYEVFFN----NNNLSGV-----IPFSLGNLKRLAFLEMSGNE--LSGTIPEDIFNIS 470 (1008)
Q Consensus 403 L~Ls~N~l~~~~p~~~~~-l~~L~~L~l~----~N~l~~~-----~p~~~~~l~~L~~L~Ls~N~--l~~~lp~~~~~~~ 470 (1008)
|+|+.|.+++..+..+.. +++|+.|+++ .|.+++. ++..+.++++|+.|++++|. +++
T Consensus 383 L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~---------- 452 (592)
T 3ogk_B 383 MAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTD---------- 452 (592)
T ss_dssp EEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCH----------
T ss_pred EEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccH----------
Confidence 666666665554444443 5566666664 4455432 22234556777777776432 432
Q ss_pred hhhhhhcccCccccCCCccccc-ccccccccccccccccC-CCCcccccccccceeeccCcccccc-hhhhhhccccccE
Q 045798 471 YLSNSLNLARNHLVGIIPPRIG-NLRALRSFDVSNNDLSG-EIPIELGHCSSLEEIYLAGNLFHGS-IPSFFNALKGVQK 547 (1008)
Q Consensus 471 ~~~~~L~L~~N~l~~~~p~~~~-~l~~L~~Ldls~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~ 547 (1008)
..+..++ .+++|+.|+|++|.+++ .++..+..+++|++|+|++|.+++. ++..+..+++|+.
T Consensus 453 ---------------~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~ 517 (592)
T 3ogk_B 453 ---------------LGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRY 517 (592)
T ss_dssp ---------------HHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCE
T ss_pred ---------------HHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCe
Confidence 1122222 26678888888888775 3455556778888888888888755 4555677888999
Q ss_pred EecCCCccccc
Q 045798 548 IDLSRNNLSGQ 558 (1008)
Q Consensus 548 L~ls~N~l~~~ 558 (1008)
|+|++|++++.
T Consensus 518 L~ls~n~it~~ 528 (592)
T 3ogk_B 518 LWVQGYRASMT 528 (592)
T ss_dssp EEEESCBCCTT
T ss_pred eECcCCcCCHH
Confidence 99999988764
No 303
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=1e-30 Score=288.80 Aligned_cols=277 Identities=18% Similarity=0.272 Sum_probs=221.7
Q ss_pred cCCCCCCCCCCC--CCCCCcccceEEcCCCCeEEEEeccccCCCCccCcCc--cCCccCCeeeecCCCCCCCCCccccCC
Q 045798 26 HEPQGILNSWND--SRHFCEWEGITCGRRHRRVTALDLMSKSLSGSLSPHL--GNLSFLREINLSNNTIQGEIPPEFGRL 101 (1008)
Q Consensus 26 ~~~~~~~~~w~~--~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~~~l~~~l--~~l~~L~~L~L~~n~~~~~~p~~~~~l 101 (1008)
.|+..++..|.. ..++|.|.+.-|.............+.... .++..+ .....+++|+|++|+++ .+|..+.++
T Consensus 26 ~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~-~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~l~~l 103 (328)
T 4fcg_A 26 RPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALK-ATADLLEDATQPGRVALELRSVPLP-QFPDQAFRL 103 (328)
T ss_dssp CCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHH-HHHHHHHHHTSTTCCEEEEESSCCS-SCCSCGGGG
T ss_pred chHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchh-hhHHHHhcccccceeEEEccCCCch-hcChhhhhC
Confidence 455556777865 357889988776321110000001111000 111111 23578999999999999 889999999
Q ss_pred CCCCEEEccCCCCCCccCcccccCcCcceEeeeccccccCCCccccccCCCCeeecccccCCCCCCCCCcc---------
Q 045798 102 FRLEALFLSNNSLVGKIPANLSYCSRLTVLCIEYNKLQGRIPLEFVSLSKLKDLSLAKNKLTGGIPPFLGN--------- 172 (1008)
Q Consensus 102 ~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~--------- 172 (1008)
++|++|+|++|.++ .+|..++.+++|++|+|++|+++ .+|..|.++++|++|+|++|++.+.+|..++.
T Consensus 104 ~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~ 181 (328)
T 4fcg_A 104 SHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQG 181 (328)
T ss_dssp TTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEE
T ss_pred CCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhcc
Confidence 99999999999999 89999999999999999999999 78999999999999999999988899988765
Q ss_pred ccccchhhcccccCCCCCCccccCCCCCcEEEecCCcccccCCccccCCCCcceeccccccccccCChhhhhcCCCCcEE
Q 045798 173 LTSLEVLSLAGNSFGRNIPDSLGQLKQLKILAIGGNNLSGPIPPSIYNLSFLVVFSVSHNQIHGSLPPSLGLLLPNLKFF 252 (1008)
Q Consensus 173 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~lp~~~~~~l~~L~~L 252 (1008)
+++|++|+|++|+++ .+|..++.+++|++|+|++|.+++ +|..+..+++|++|++++|.+.+.+|..+. .+++|++|
T Consensus 182 l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~-~l~~L~~L 258 (328)
T 4fcg_A 182 LVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFG-GRAPLKRL 258 (328)
T ss_dssp STTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECTTCTTCCBCCCCTT-CCCCCCEE
T ss_pred CCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEECcCCcchhhhHHHhc-CCCCCCEE
Confidence 889999999999996 778889999999999999999985 566788899999999999988888877654 47889999
Q ss_pred EeccccCCCCCCcccccCCCCceeecccccccccccccccCCCcccccccccccCCC
Q 045798 253 QIHHNFFSGSIPISLSNASKLEHIEIANNNFSGKLSVNFGGMKNLSLLNLQFSNLGS 309 (1008)
Q Consensus 253 ~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 309 (1008)
+|++|.+.+.+|..+.++++|++|++++|++.+..|..+..+++|+.+++..+.+..
T Consensus 259 ~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~~ 315 (328)
T 4fcg_A 259 ILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQAQ 315 (328)
T ss_dssp ECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSCC
T ss_pred ECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHHH
Confidence 999988888888888899999999999998888888888888888888877665543
No 304
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=1.2e-28 Score=270.42 Aligned_cols=250 Identities=20% Similarity=0.212 Sum_probs=122.1
Q ss_pred ceeccccccccccCChhhhhcCCCCcEEEeccccCCCCCCcccccCCCCceeecccccccccccccccCCCccccccccc
Q 045798 225 VVFSVSHNQIHGSLPPSLGLLLPNLKFFQIHHNFFSGSIPISLSNASKLEHIEIANNNFSGKLSVNFGGMKNLSLLNLQF 304 (1008)
Q Consensus 225 ~~L~ls~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 304 (1008)
+.++++++.++ .+|..+. ++|++|+|++|.++...+..+.++++|++|++++|++.....
T Consensus 10 ~~l~c~~~~l~-~ip~~~~---~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~---------------- 69 (306)
T 2z66_A 10 TEIRCNSKGLT-SVPTGIP---SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGC---------------- 69 (306)
T ss_dssp TEEECCSSCCS-SCCSCCC---TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEE----------------
T ss_pred CEEEcCCCCcc-cCCCCCC---CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccC----------------
Confidence 34566666665 5554332 355555555555553333334445555555555554432110
Q ss_pred ccCCCCCCCcccccccccccCCCcEEEecCCcCCccCChhhhhhcccceeeeeccccccCCCC-CccccccccceEEecC
Q 045798 305 SNLGSGESDEMGFMNSLTNCSKLRVLSLGGNQFRGALPHSIANLSSQLQILILSSNQFYGSIP-LGIGNLVDLYLLGMVE 383 (1008)
Q Consensus 305 n~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~ 383 (1008)
.+..+..+++|++|++++|.+. .+|..+..+. +|++|++++|.+++..+ ..+..+++|++|++++
T Consensus 70 ------------~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~ 135 (306)
T 2z66_A 70 ------------CSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLE-QLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISH 135 (306)
T ss_dssp ------------EEHHHHSCSCCCEEECCSCSEE-EEEEEEETCT-TCCEEECTTSEEESSTTTTTTTTCTTCCEEECTT
T ss_pred ------------cccccccccccCEEECCCCccc-cChhhcCCCC-CCCEEECCCCcccccccchhhhhccCCCEEECCC
Confidence 0112233445555555555554 3333344333 35555555555553332 3455555555555555
Q ss_pred ccccCCcchhccCCCCCceEEccCCcccc-cccccccCCCCcceeeccccccccccCCCCcCCCcccEeecccccccCCc
Q 045798 384 NQFTGAIPKEMGKLQKLQGLDFSGNHFSG-EIPSSLGNLSSLYEVFFNNNNLSGVIPFSLGNLKRLAFLEMSGNELSGTI 462 (1008)
Q Consensus 384 n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~l 462 (1008)
|.+.+..+..+..+++|++|+|++|.+++ .+|..+..+++|++|++++|.+++..|..|..+++|+.|+|++|++++
T Consensus 136 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~-- 213 (306)
T 2z66_A 136 THTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFS-- 213 (306)
T ss_dssp SCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSB--
T ss_pred CcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCc--
Confidence 55555555555555555555555555543 344455555555555555555554445555555555555555555442
Q ss_pred chhhhhhhhhhhhhcccCccccCCCcccccccccccccccccccccCCCCcccccc-cccceeeccCccccc
Q 045798 463 PEDIFNISYLSNSLNLARNHLVGIIPPRIGNLRALRSFDVSNNDLSGEIPIELGHC-SSLEEIYLAGNLFHG 533 (1008)
Q Consensus 463 p~~~~~~~~~~~~L~L~~N~l~~~~p~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l-~~L~~L~L~~N~l~~ 533 (1008)
..+..+..+++|+.|||++|.+++..|..+..+ ++|++|+|++|++++
T Consensus 214 -----------------------~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~ 262 (306)
T 2z66_A 214 -----------------------LDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFAC 262 (306)
T ss_dssp -----------------------CCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEEC
T ss_pred -----------------------cChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeec
Confidence 222234445555555555555555555555554 255555555555554
No 305
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.95 E-value=2.1e-31 Score=321.36 Aligned_cols=398 Identities=14% Similarity=0.099 Sum_probs=272.8
Q ss_pred CeEEEEeccccCC---CCccCcCcc------------CCccCCeeeecCCCCCCCCCccccCC--CCCCEEEccCCC-CC
Q 045798 54 RRVTALDLMSKSL---SGSLSPHLG------------NLSFLREINLSNNTIQGEIPPEFGRL--FRLEALFLSNNS-LV 115 (1008)
Q Consensus 54 ~~v~~l~l~~~~l---~~~l~~~l~------------~l~~L~~L~L~~n~~~~~~p~~~~~l--~~L~~L~Ls~n~-l~ 115 (1008)
.+++.|+|.++.. .+.+|..++ .+++|++|+|++|.+++..+..+... .+|++|+|++|. ++
T Consensus 73 ~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~ 152 (592)
T 3ogk_B 73 PNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFT 152 (592)
T ss_dssp TTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEE
T ss_pred CCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcC
Confidence 4588999977532 133443333 78999999999999887766667663 449999999997 32
Q ss_pred C-ccCcccccCcCcceEeeeccccccC----CCccccccCCCCeeecccccCCC----CCCCCCccccccchhhcccccC
Q 045798 116 G-KIPANLSYCSRLTVLCIEYNKLQGR----IPLEFVSLSKLKDLSLAKNKLTG----GIPPFLGNLTSLEVLSLAGNSF 186 (1008)
Q Consensus 116 ~-~~p~~l~~l~~L~~L~Ls~n~l~~~----~p~~~~~l~~L~~L~L~~n~l~~----~~~~~~~~l~~L~~L~L~~n~l 186 (1008)
. .++..+..+++|++|+|++|.+++. ++..+..+++|++|++++|.+++ .++..+.++++|++|++++|.+
T Consensus 153 ~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~ 232 (592)
T 3ogk_B 153 TDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEI 232 (592)
T ss_dssp HHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBG
T ss_pred HHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccH
Confidence 1 2233345889999999999999866 44456678999999999999973 3344456789999999999998
Q ss_pred CCCCCccccCCCCCcEEEecCCccc---ccCCccccCCCCcceeccccccccccCChhhhhcCCCCcEEEeccccCCCCC
Q 045798 187 GRNIPDSLGQLKQLKILAIGGNNLS---GPIPPSIYNLSFLVVFSVSHNQIHGSLPPSLGLLLPNLKFFQIHHNFFSGSI 263 (1008)
Q Consensus 187 ~~~~~~~~~~l~~L~~L~L~~n~l~---~~~~~~~~~l~~L~~L~ls~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~ 263 (1008)
.+ ++..+..+++|+.|+++.+... ...+..+..+++|+.|+++++... .+|.. +..+++|++|+|++|.+++..
T Consensus 233 ~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~-~l~~~-~~~~~~L~~L~Ls~~~l~~~~ 309 (592)
T 3ogk_B 233 LE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPN-EMPIL-FPFAAQIRKLDLLYALLETED 309 (592)
T ss_dssp GG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTT-TGGGG-GGGGGGCCEEEETTCCCCHHH
T ss_pred HH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccchh-HHHHH-HhhcCCCcEEecCCCcCCHHH
Confidence 65 7788999999999999864333 344567788889999999886543 45543 344788999999999876543
Q ss_pred C-cccccCCCCceeecccccccc-cccccccCCCccccccccc-----------ccCCCCCCCcccccccccccCCCcEE
Q 045798 264 P-ISLSNASKLEHIEIANNNFSG-KLSVNFGGMKNLSLLNLQF-----------SNLGSGESDEMGFMNSLTNCSKLRVL 330 (1008)
Q Consensus 264 p-~~l~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~L~~-----------n~l~~~~~~~~~~~~~l~~l~~L~~L 330 (1008)
. ..+..+++|++|+++ +.+.+ ..+..+..+++|+.|++++ |.++.. ++......+++|+.|
T Consensus 310 ~~~~~~~~~~L~~L~L~-~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~-----~~~~l~~~~~~L~~L 383 (592)
T 3ogk_B 310 HCTLIQKCPNLEVLETR-NVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQR-----GLIALAQGCQELEYM 383 (592)
T ss_dssp HHHHHTTCTTCCEEEEE-GGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHH-----HHHHHHHHCTTCSEE
T ss_pred HHHHHHhCcCCCEEecc-CccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHH-----HHHHHHhhCccCeEE
Confidence 3 335788899999998 44433 3333345678888888883 344321 111223457788888
Q ss_pred EecCCcCCccCChhhhhhcccceeeeec----cccccCC-----CCCccccccccceEEecCcc--ccCCcchhcc-CCC
Q 045798 331 SLGGNQFRGALPHSIANLSSQLQILILS----SNQFYGS-----IPLGIGNLVDLYLLGMVENQ--FTGAIPKEMG-KLQ 398 (1008)
Q Consensus 331 ~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls----~N~l~~~-----~p~~~~~l~~L~~L~L~~n~--l~~~~~~~~~-~l~ 398 (1008)
+++.|.+++..+..+....++|+.|+++ .|.+++. ++..+..+++|+.|++++|. +++..+..+. .++
T Consensus 384 ~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~ 463 (592)
T 3ogk_B 384 AVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSP 463 (592)
T ss_dssp EEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCT
T ss_pred EeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCc
Confidence 8888888766666666533468888885 5566642 22235567777777776433 5544444443 367
Q ss_pred CCceEEccCCcccc-cccccccCCCCcceeeccccccccc-cCCCCcCCCcccEeecccccccC
Q 045798 399 KLQGLDFSGNHFSG-EIPSSLGNLSSLYEVFFNNNNLSGV-IPFSLGNLKRLAFLEMSGNELSG 460 (1008)
Q Consensus 399 ~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~ 460 (1008)
+|+.|+|++|++++ .++..+.++++|++|++++|.+++. ++..+..+++|++|+|++|++++
T Consensus 464 ~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~ 527 (592)
T 3ogk_B 464 NVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASM 527 (592)
T ss_dssp TCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCT
T ss_pred cceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCH
Confidence 77777777777765 3344456667777777777776543 33334556777777777777663
No 306
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=2.3e-28 Score=290.10 Aligned_cols=292 Identities=25% Similarity=0.349 Sum_probs=181.3
Q ss_pred CCCCCCCCCCCCcccceEE------cCCCCeEEEEeccccCCCCccCcCccCCccCCeeeecCCCCCCCCCccccCCCCC
Q 045798 31 ILNSWNDSRHFCEWEGITC------GRRHRRVTALDLMSKSLSGSLSPHLGNLSFLREINLSNNTIQGEIPPEFGRLFRL 104 (1008)
Q Consensus 31 ~~~~w~~~~~~c~w~gv~c------~~~~~~v~~l~l~~~~l~~~l~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L 104 (1008)
..+.|....+||.|+|..| .+....++.|++++++++ .+|..+. ++|++|+|++|+++ .+|. .+++|
T Consensus 11 ~w~~W~~~~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L 83 (622)
T 3g06_A 11 VWSAWRRAAPAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPEL 83 (622)
T ss_dssp HHHHHHHTCCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTC
T ss_pred HHHHHHhcCCcchhccccccCcccccccCCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCC
Confidence 3456877889999977432 112234677777777777 6666665 67777777777777 4554 46777
Q ss_pred CEEEccCCCCCCccCcccccCcCcceEeeeccccccCCCccccccCCCCeeecccccCCCCCCCCCccccccchhhcccc
Q 045798 105 EALFLSNNSLVGKIPANLSYCSRLTVLCIEYNKLQGRIPLEFVSLSKLKDLSLAKNKLTGGIPPFLGNLTSLEVLSLAGN 184 (1008)
Q Consensus 105 ~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 184 (1008)
++|+|++|+|+ .+|. .+++|++|+|++|++++ +|. .+++|+.|++++|+|+ .+|.. +++|++|+|++|
T Consensus 84 ~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~-~lp~~---l~~L~~L~Ls~N 151 (622)
T 3g06_A 84 RTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLT-SLPVL---PPGLQELSVSDN 151 (622)
T ss_dssp CEEEECSCCCS-CCCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCS-CCCCC---CTTCCEEECCSS
T ss_pred CEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCC-cCCCC---CCCCCEEECcCC
Confidence 77777777777 4554 56777777777777764 333 3566677777777766 34443 255666666666
Q ss_pred cCCCCCCccccCCCCCcEEEecCCcccccCCccccCCCCcceeccccccccccCChhhhhcCCCCcEEEeccccCCCCCC
Q 045798 185 SFGRNIPDSLGQLKQLKILAIGGNNLSGPIPPSIYNLSFLVVFSVSHNQIHGSLPPSLGLLLPNLKFFQIHHNFFSGSIP 264 (1008)
Q Consensus 185 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p 264 (1008)
++++ +|. .+++|+.|++++|.+++ +| ..+++|+.|+|++|.+++ +|
T Consensus 152 ~l~~-l~~---~~~~L~~L~L~~N~l~~-------------------------l~----~~~~~L~~L~Ls~N~l~~-l~ 197 (622)
T 3g06_A 152 QLAS-LPA---LPSELCKLWAYNNQLTS-------------------------LP----MLPSGLQELSVSDNQLAS-LP 197 (622)
T ss_dssp CCSC-CCC---CCTTCCEEECCSSCCSC-------------------------CC----CCCTTCCEEECCSSCCSC-CC
T ss_pred cCCC-cCC---ccCCCCEEECCCCCCCC-------------------------Cc----ccCCCCcEEECCCCCCCC-CC
Confidence 6543 222 23445555555555543 33 123455555555555552 23
Q ss_pred cccccCCCCceeecccccccccccccccCCCcccccccccccCCCCCCCcccccccccccCCCcEEEecCCcCCccCChh
Q 045798 265 ISLSNASKLEHIEIANNNFSGKLSVNFGGMKNLSLLNLQFSNLGSGESDEMGFMNSLTNCSKLRVLSLGGNQFRGALPHS 344 (1008)
Q Consensus 265 ~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~ 344 (1008)
.. +++|+.|++++|.++.+.. .+++|+.|++++|++++ +|..
T Consensus 198 ~~---~~~L~~L~L~~N~l~~l~~----------------------------------~~~~L~~L~Ls~N~L~~-lp~~ 239 (622)
T 3g06_A 198 TL---PSELYKLWAYNNRLTSLPA----------------------------------LPSGLKELIVSGNRLTS-LPVL 239 (622)
T ss_dssp CC---CTTCCEEECCSSCCSSCCC----------------------------------CCTTCCEEECCSSCCSC-CCCC
T ss_pred Cc---cchhhEEECcCCcccccCC----------------------------------CCCCCCEEEccCCccCc-CCCC
Confidence 21 2455666666665553211 11345566666666653 4411
Q ss_pred hhhhcccceeeeeccccccCCCCCccccccccceEEecCccccCCcchhccCCCCCceEEccCCcccccccccccCCC
Q 045798 345 IANLSSQLQILILSSNQFYGSIPLGIGNLVDLYLLGMVENQFTGAIPKEMGKLQKLQGLDFSGNHFSGEIPSSLGNLS 422 (1008)
Q Consensus 345 ~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 422 (1008)
.++|++|+|++|+|+ .+|. .+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|.+++..|..+..++
T Consensus 240 ----l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 240 ----PSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp ----CTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHHH
T ss_pred ----CCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhcc
Confidence 135777777777777 4554 5677888888888888 6688888899999999999999888887766554
No 307
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=4.9e-30 Score=281.86 Aligned_cols=248 Identities=19% Similarity=0.234 Sum_probs=142.5
Q ss_pred CCccCCeeeecCCCCCCCCCccccCCCCCCEEEccCCCCC-CccCcccc-------cCcCcceEeeeccccccCCCccc-
Q 045798 76 NLSFLREINLSNNTIQGEIPPEFGRLFRLEALFLSNNSLV-GKIPANLS-------YCSRLTVLCIEYNKLQGRIPLEF- 146 (1008)
Q Consensus 76 ~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~-~~~p~~l~-------~l~~L~~L~Ls~n~l~~~~p~~~- 146 (1008)
..++|++|++++|.+ .+|..+... |++|+|++|.++ ..+|..+. ++++|++|+|++|++++.+|..+
T Consensus 41 ~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 116 (312)
T 1wwl_A 41 GGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLL 116 (312)
T ss_dssp EEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSS
T ss_pred cCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHH
Confidence 344555555555555 445444433 555555555552 33444443 45556666666666655555544
Q ss_pred -cccCCCCeeecccccCCCCCCCCCccc-----cccchhhcccccCCCCCCccccCCCCCcEEEecCCccccc--CCccc
Q 045798 147 -VSLSKLKDLSLAKNKLTGGIPPFLGNL-----TSLEVLSLAGNSFGRNIPDSLGQLKQLKILAIGGNNLSGP--IPPSI 218 (1008)
Q Consensus 147 -~~l~~L~~L~L~~n~l~~~~~~~~~~l-----~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~--~~~~~ 218 (1008)
..+++|++|+|++|++++. |..++.+ ++|++|+|++|++.+..+..|+.+++|++|++++|++.+. .+..+
T Consensus 117 ~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 195 (312)
T 1wwl_A 117 EATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISAL 195 (312)
T ss_dssp SCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHS
T ss_pred HhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHH
Confidence 5555666666666665544 5555554 5666666666666555555666666666666666665443 22222
Q ss_pred --cCCCCcceeccccccccc--cCChhhhhcCCCCcEEEeccccCCCCCC-cccccCCCCceeecccccccccccccccC
Q 045798 219 --YNLSFLVVFSVSHNQIHG--SLPPSLGLLLPNLKFFQIHHNFFSGSIP-ISLSNASKLEHIEIANNNFSGKLSVNFGG 293 (1008)
Q Consensus 219 --~~l~~L~~L~ls~N~l~~--~lp~~~~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~L~~N~l~~~~~~~~~~ 293 (1008)
..+++|++|++++|++++ .++..++..+++|++|+|++|.+.+..| ..+..+++|++|++++|+++. .|..+.
T Consensus 196 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~- 273 (312)
T 1wwl_A 196 CPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLKQ-VPKGLP- 273 (312)
T ss_dssp CTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCSS-CCSSCC-
T ss_pred HhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccCh-hhhhcc-
Confidence 556666666666666652 3334444456666677777776665554 344556677777777777663 333333
Q ss_pred CCcccccccccccCCCCCCCcccccccccccCCCcEEEecCCcCCc
Q 045798 294 MKNLSLLNLQFSNLGSGESDEMGFMNSLTNCSKLRVLSLGGNQFRG 339 (1008)
Q Consensus 294 l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~ 339 (1008)
++|+.|+|++|+++..+ .+..+++|++|++++|++++
T Consensus 274 -~~L~~L~Ls~N~l~~~p--------~~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 274 -AKLSVLDLSYNRLDRNP--------SPDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp -SEEEEEECCSSCCCSCC--------CTTTSCEEEEEECTTCTTTC
T ss_pred -CCceEEECCCCCCCCCh--------hHhhCCCCCEEeccCCCCCC
Confidence 66777777777766542 24566777778888877764
No 308
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.95 E-value=1.3e-27 Score=267.84 Aligned_cols=284 Identities=22% Similarity=0.235 Sum_probs=148.1
Q ss_pred CcCcceEeeeccccccCCCccccccCCCCeeecccccCCCCCCCCCccccccchhhcccccCCCCCCccccCCCCCcEEE
Q 045798 125 CSRLTVLCIEYNKLQGRIPLEFVSLSKLKDLSLAKNKLTGGIPPFLGNLTSLEVLSLAGNSFGRNIPDSLGQLKQLKILA 204 (1008)
Q Consensus 125 l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 204 (1008)
++.....++++|.++ .+|..+. ++|++|++++|++++..+..|.++++|++|++++|++++..+.+|..+++|++|+
T Consensus 30 C~~~~~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (353)
T 2z80_A 30 CDRNGICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLD 106 (353)
T ss_dssp ECTTSEEECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCeEeeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEE
Confidence 344444555555555 3444333 3555555555555543333455555555555555555444444555555555555
Q ss_pred ecCCcccccCCccccCCCCcceeccccccccccCChhhhhcCCCCcEEEeccccCCCCCCcccccCCCCceeecccc-cc
Q 045798 205 IGGNNLSGPIPPSIYNLSFLVVFSVSHNQIHGSLPPSLGLLLPNLKFFQIHHNFFSGSIPISLSNASKLEHIEIANN-NF 283 (1008)
Q Consensus 205 L~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N-~l 283 (1008)
+++|.+++..+..|.++++|++|++++|+++ .+|.. ..+.++++|++|++++| .+
T Consensus 107 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~-----------------------~~~~~l~~L~~L~l~~n~~~ 162 (353)
T 2z80_A 107 LSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK-TLGET-----------------------SLFSHLTKLQILRVGNMDTF 162 (353)
T ss_dssp CCSSCCSSCCHHHHTTCTTCSEEECTTCCCS-SSCSS-----------------------CSCTTCTTCCEEEEEESSSC
T ss_pred CCCCcCCcCCHhHhCCCccCCEEECCCCCCc-ccCch-----------------------hhhccCCCCcEEECCCCccc
Confidence 5555555333333444444444444444444 33330 24455555555555555 24
Q ss_pred cccccccccCCCcccccccccccCCCCCCCcccccccccccCCCcEEEecCCcCCccCChhhhhhcccceeeeecccccc
Q 045798 284 SGKLSVNFGGMKNLSLLNLQFSNLGSGESDEMGFMNSLTNCSKLRVLSLGGNQFRGALPHSIANLSSQLQILILSSNQFY 363 (1008)
Q Consensus 284 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~ 363 (1008)
....+..|.++++|+.|++++|++.... +..+..+++|++|++++|++. .+|..+....++|++|++++|.++
T Consensus 163 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~------~~~l~~l~~L~~L~l~~n~l~-~~~~~~~~~~~~L~~L~L~~n~l~ 235 (353)
T 2z80_A 163 TKIQRKDFAGLTFLEELEIDASDLQSYE------PKSLKSIQNVSHLILHMKQHI-LLLEIFVDVTSSVECLELRDTDLD 235 (353)
T ss_dssp CEECTTTTTTCCEEEEEEEEETTCCEEC------TTTTTTCSEEEEEEEECSCST-THHHHHHHHTTTEEEEEEESCBCT
T ss_pred cccCHHHccCCCCCCEEECCCCCcCccC------HHHHhccccCCeecCCCCccc-cchhhhhhhcccccEEECCCCccc
Confidence 4444444555555555555544443321 123455566667777777765 445444433345777777777776
Q ss_pred CCCCCccccccccceEEecCccccCCcchhccCCCCCceEEccCCcccc----cccccccCCCCcceeeccccccccccC
Q 045798 364 GSIPLGIGNLVDLYLLGMVENQFTGAIPKEMGKLQKLQGLDFSGNHFSG----EIPSSLGNLSSLYEVFFNNNNLSGVIP 439 (1008)
Q Consensus 364 ~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~l~~N~l~~~~p 439 (1008)
+..+..+.. ......++.++|++|.+.+ .+|..+..+++|++|++++|+++...+
T Consensus 236 ~~~~~~l~~---------------------~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~ 294 (353)
T 2z80_A 236 TFHFSELST---------------------GETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPD 294 (353)
T ss_dssp TCCCC---------------------------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCT
T ss_pred ccccccccc---------------------ccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCH
Confidence 544332221 1122344455555555443 355666667777777777777774333
Q ss_pred CCCcCCCcccEeecccccccCCcc
Q 045798 440 FSLGNLKRLAFLEMSGNELSGTIP 463 (1008)
Q Consensus 440 ~~~~~l~~L~~L~Ls~N~l~~~lp 463 (1008)
..|.++++|++|+|++|.+++..|
T Consensus 295 ~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 295 GIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp TTTTTCTTCCEEECCSSCBCCCHH
T ss_pred HHHhcCCCCCEEEeeCCCccCcCC
Confidence 335777888888888888876554
No 309
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=5.7e-28 Score=262.07 Aligned_cols=253 Identities=19% Similarity=0.199 Sum_probs=179.3
Q ss_pred cEEEecCCcCCccCChhhhhhcccceeeeeccccccCCCCCccccccccceEEecCccccCCcchhccCCCCCceEEccC
Q 045798 328 RVLSLGGNQFRGALPHSIANLSSQLQILILSSNQFYGSIPLGIGNLVDLYLLGMVENQFTGAIPKEMGKLQKLQGLDFSG 407 (1008)
Q Consensus 328 ~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 407 (1008)
++++.+++.++ .+|..+. .+|++|++++|.+++..+..|..+++|++|++++|.+++..|..|..+++|++|+|++
T Consensus 14 ~~~~c~~~~l~-~ip~~~~---~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 89 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGIP---AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSD 89 (285)
T ss_dssp CEEECCSSCCS-SCCTTCC---TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred eEEEcCcCCcc-cCCcCCC---CCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCC
Confidence 45566666665 4454332 2466666666666655555666666666666666666666666666666667777766
Q ss_pred Cc-ccccccccccCCCCcceeeccccccccccCCCCcCCCcccEeecccccccCCcchhhhhhhhhhhhhcccCccccCC
Q 045798 408 NH-FSGEIPSSLGNLSSLYEVFFNNNNLSGVIPFSLGNLKRLAFLEMSGNELSGTIPEDIFNISYLSNSLNLARNHLVGI 486 (1008)
Q Consensus 408 N~-l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~~~~~~~~~~~~L~L~~N~l~~~ 486 (1008)
|+ +....|..+..+++|++|++++|.+.+..|..|.++++|++|++++|+++ .+|...+.....++.|+|++|++++.
T Consensus 90 n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~ 168 (285)
T 1ozn_A 90 NAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQ-ALPDDTFRDLGNLTHLFLHGNRISSV 168 (285)
T ss_dssp CTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCEE
T ss_pred CCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCccc-ccCHhHhccCCCccEEECCCCccccc
Confidence 65 55444666666666667777766666666666666666777777766666 44444444444455666666666655
Q ss_pred CcccccccccccccccccccccCCCCcccccccccceeeccCcccccchhhhhhccccccEEecCCCcccccccCccccc
Q 045798 487 IPPRIGNLRALRSFDVSNNDLSGEIPIELGHCSSLEEIYLAGNLFHGSIPSFFNALKGVQKIDLSRNNLSGQIPIFLEAL 566 (1008)
Q Consensus 487 ~p~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~ 566 (1008)
.+..|..+++|+.|+|++|.+++..|..+..+++|++|+|++|++++..+..|..+++|+.|+|++|++++..+...-..
T Consensus 169 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~~~~~ 248 (285)
T 1ozn_A 169 PERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRARPLWA 248 (285)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGHHHHH
T ss_pred CHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcHHHHH
Confidence 56678889999999999999998889999999999999999999998778889999999999999999987665442233
Q ss_pred ccceeecccCcccccCCCC
Q 045798 567 SLEYLNLSFNDFEGKIPAK 585 (1008)
Q Consensus 567 ~L~~L~l~~N~l~g~~p~~ 585 (1008)
.++.+..+.|.+.+..|+.
T Consensus 249 ~l~~~~~~~~~~~c~~p~~ 267 (285)
T 1ozn_A 249 WLQKFRGSSSEVPCSLPQR 267 (285)
T ss_dssp HHHHCCSEECCCBEEESGG
T ss_pred HHHhcccccCccccCCchH
Confidence 4777778888888888864
No 310
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=4.5e-29 Score=274.19 Aligned_cols=254 Identities=20% Similarity=0.216 Sum_probs=160.4
Q ss_pred cccCCCcccccccccccCCCCCCCcccccccccccCCCcEEEecCCcCC-ccCChhhh-------hhcccceeeeecccc
Q 045798 290 NFGGMKNLSLLNLQFSNLGSGESDEMGFMNSLTNCSKLRVLSLGGNQFR-GALPHSIA-------NLSSQLQILILSSNQ 361 (1008)
Q Consensus 290 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~-~~~p~~~~-------~l~~~L~~L~Ls~N~ 361 (1008)
.+++.++|+.|++++|.+ .+. ..+... |+.|+|++|++. ..+|..+. .+. +|++|+|++|.
T Consensus 38 ~~~~~~~L~~l~l~~n~l-~~p-------~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~-~L~~L~L~~n~ 106 (312)
T 1wwl_A 38 LYGGGRSLEYLLKRVDTE-ADL-------GQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGIS-GLQELTLENLE 106 (312)
T ss_dssp EEEEEEECTTHHHHCCTT-CCC-------HHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTS-CCCEEEEEEEB
T ss_pred EEccCCCceeEeeccccc-ccH-------HHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcC-CccEEEccCCc
Confidence 455666777777777776 222 122222 666677777763 34555443 343 47777777777
Q ss_pred ccCCCCCcc--ccccccceEEecCccccCCcchhccCC-----CCCceEEccCCcccccccccccCCCCcceeecccccc
Q 045798 362 FYGSIPLGI--GNLVDLYLLGMVENQFTGAIPKEMGKL-----QKLQGLDFSGNHFSGEIPSSLGNLSSLYEVFFNNNNL 434 (1008)
Q Consensus 362 l~~~~p~~~--~~l~~L~~L~L~~n~l~~~~~~~~~~l-----~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l 434 (1008)
+++.+|..+ ..+++|++|+|++|++++. |..+..+ ++|++|+|++|++.+..|..|+.+++|++|++++|++
T Consensus 107 l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 185 (312)
T 1wwl_A 107 VTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPE 185 (312)
T ss_dssp CBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTT
T ss_pred ccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCc
Confidence 776666665 6677777777777777765 6666665 6777777777777766666677777777777777776
Q ss_pred ccc--cCCCC--cCCCcccEeecccccccCCcchhhhhhhhhhhhhcccCccccCCCcccccccccccccccccccccCC
Q 045798 435 SGV--IPFSL--GNLKRLAFLEMSGNELSGTIPEDIFNISYLSNSLNLARNHLVGIIPPRIGNLRALRSFDVSNNDLSGE 510 (1008)
Q Consensus 435 ~~~--~p~~~--~~l~~L~~L~Ls~N~l~~~lp~~~~~~~~~~~~L~L~~N~l~~~~p~~~~~l~~L~~Ldls~N~l~~~ 510 (1008)
.+. .|..+ ..+++|++|+|++|++++ +|. .....+..+++|+.|||++|.+++.
T Consensus 186 ~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~---------------------~~~~~~~~l~~L~~L~Ls~N~l~~~ 243 (312)
T 1wwl_A 186 LGERGLISALCPLKFPTLQVLALRNAGMET-PSG---------------------VCSALAAARVQLQGLDLSHNSLRDA 243 (312)
T ss_dssp CHHHHHHHHSCTTSCTTCCEEECTTSCCCC-HHH---------------------HHHHHHHTTCCCSEEECTTSCCCSS
T ss_pred CcchHHHHHHHhccCCCCCEEECCCCcCcc-hHH---------------------HHHHHHhcCCCCCEEECCCCcCCcc
Confidence 554 22222 666777777777777652 211 1112234556777777777777765
Q ss_pred CC-cccccccccceeeccCcccccchhhhhhccccccEEecCCCcccccccCcccccccceeecccCccccc
Q 045798 511 IP-IELGHCSSLEEIYLAGNLFHGSIPSFFNALKGVQKIDLSRNNLSGQIPIFLEALSLEYLNLSFNDFEGK 581 (1008)
Q Consensus 511 ~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~L~~L~l~~N~l~g~ 581 (1008)
.| ..+..+++|++|+|++|+|+ .+|..+. ++|+.|||++|+|++. |....+.+|++|++++|++++.
T Consensus 244 ~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~~~~l~~L~~L~L~~N~l~~~ 311 (312)
T 1wwl_A 244 AGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PSPDELPQVGNLSLKGNPFLDS 311 (312)
T ss_dssp CCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CCTTTSCEEEEEECTTCTTTCC
T ss_pred cchhhhhhcCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hhHhhCCCCCEEeccCCCCCCC
Confidence 54 34555677777777777777 5666655 6777777777777765 5555666777777777777663
No 311
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=1.7e-27 Score=276.30 Aligned_cols=238 Identities=24% Similarity=0.199 Sum_probs=138.3
Q ss_pred cccCCCCccCcCccCCccCCeeeecCCCCCCCCCccccCCCCCCEEEccCCCCCCccCcccccCcCcceEeeeccccccC
Q 045798 62 MSKSLSGSLSPHLGNLSFLREINLSNNTIQGEIPPEFGRLFRLEALFLSNNSLVGKIPANLSYCSRLTVLCIEYNKLQGR 141 (1008)
Q Consensus 62 ~~~~l~~~l~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~ 141 (1008)
.+.+++ .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++.
T Consensus 62 ~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~ 138 (452)
T 3zyi_A 62 TRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVI 138 (452)
T ss_dssp CSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBC
T ss_pred CCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCcc
Confidence 344444 4555443 4667777777777766666677777777777777777766666677777777777777777655
Q ss_pred CCccccccCCCCeeecccccCCCCCCCCCccccccchhhccc-ccCCCCCCccccCCCCCcEEEecCCcccccCCccccC
Q 045798 142 IPLEFVSLSKLKDLSLAKNKLTGGIPPFLGNLTSLEVLSLAG-NSFGRNIPDSLGQLKQLKILAIGGNNLSGPIPPSIYN 220 (1008)
Q Consensus 142 ~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~-n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 220 (1008)
.+..|..+++|++|+|++|+++...+..|.++++|+.|++++ |.+....+..|..+++|++|+|++|++++. | .+..
T Consensus 139 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~-~~~~ 216 (452)
T 3zyi_A 139 PSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-P-NLTP 216 (452)
T ss_dssp CTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-C-CCTT
T ss_pred ChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-c-cccc
Confidence 555666667777777777776655555666666666666666 334333344566666666666666666632 2 3555
Q ss_pred CCCcceeccccccccccCChhhhhcCCCCcEEEeccccCCCCCCcccccCCCCceeecccccccccccccccCCCccccc
Q 045798 221 LSFLVVFSVSHNQIHGSLPPSLGLLLPNLKFFQIHHNFFSGSIPISLSNASKLEHIEIANNNFSGKLSVNFGGMKNLSLL 300 (1008)
Q Consensus 221 l~~L~~L~ls~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 300 (1008)
+++|+.|+|++|++++ ++...+..+++|+.|+|++|.+.+..|..+..+++|++|+|++|++++..+..|..+++|+.|
T Consensus 217 l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 295 (452)
T 3zyi_A 217 LVGLEELEMSGNHFPE-IRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVEL 295 (452)
T ss_dssp CTTCCEEECTTSCCSE-ECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEE
T ss_pred cccccEEECcCCcCcc-cCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEE
Confidence 5555555555555553 222233334555555555555554445555555555555555555554444444444333333
Q ss_pred ccccc
Q 045798 301 NLQFS 305 (1008)
Q Consensus 301 ~L~~n 305 (1008)
+|++|
T Consensus 296 ~L~~N 300 (452)
T 3zyi_A 296 HLHHN 300 (452)
T ss_dssp ECCSS
T ss_pred EccCC
Confidence 33333
No 312
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=1.3e-28 Score=271.28 Aligned_cols=257 Identities=21% Similarity=0.219 Sum_probs=148.2
Q ss_pred cceeccccccccccCChhhhhcCCCCcEEEeccccCCCCCCcccccCCCCceeecccccccccccccccCCCcccccccc
Q 045798 224 LVVFSVSHNQIHGSLPPSLGLLLPNLKFFQIHHNFFSGSIPISLSNASKLEHIEIANNNFSGKLSVNFGGMKNLSLLNLQ 303 (1008)
Q Consensus 224 L~~L~ls~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 303 (1008)
++.++++.+.+. ..+..++..+++|++|+|++|.+++..|..+..+++|++|++++|++.+..+ |..++
T Consensus 12 l~i~~ls~~~l~-~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~-------- 80 (317)
T 3o53_A 12 YKIEKVTDSSLK-QALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLS-------- 80 (317)
T ss_dssp EEEESCCTTTHH-HHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCT--------
T ss_pred eeEeeccccchh-hhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcC--------
Confidence 445566666665 4555555556677777777777776666677777777777777777765433 44444
Q ss_pred cccCCCCCCCcccccccccccCCCcEEEecCCcCCccCChhhhhhcccceeeeeccccccCCCCCccccccccceEEecC
Q 045798 304 FSNLGSGESDEMGFMNSLTNCSKLRVLSLGGNQFRGALPHSIANLSSQLQILILSSNQFYGSIPLGIGNLVDLYLLGMVE 383 (1008)
Q Consensus 304 ~n~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 383 (1008)
+|++|++++|++++ ++. . .+|++|++++|++++..+. .+++|+.|++++
T Consensus 81 ----------------------~L~~L~Ls~n~l~~-l~~----~-~~L~~L~l~~n~l~~~~~~---~~~~L~~L~l~~ 129 (317)
T 3o53_A 81 ----------------------TLRTLDLNNNYVQE-LLV----G-PSIETLHAANNNISRVSCS---RGQGKKNIYLAN 129 (317)
T ss_dssp ----------------------TCCEEECCSSEEEE-EEE----C-TTCCEEECCSSCCSEEEEC---CCSSCEEEECCS
T ss_pred ----------------------CCCEEECcCCcccc-ccC----C-CCcCEEECCCCccCCcCcc---ccCCCCEEECCC
Confidence 44444444444442 111 0 1355555555555433222 234455555555
Q ss_pred ccccCCcchhccCCCCCceEEccCCccccccccccc-CCCCcceeeccccccccccCCCCcCCCcccEeecccccccCCc
Q 045798 384 NQFTGAIPKEMGKLQKLQGLDFSGNHFSGEIPSSLG-NLSSLYEVFFNNNNLSGVIPFSLGNLKRLAFLEMSGNELSGTI 462 (1008)
Q Consensus 384 n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~l 462 (1008)
|++++..+..+..+++|++|+|++|.+++..+..+. .+++|++|+|++|.+++..+ ...+++|+.|+|++|+++
T Consensus 130 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~--~~~l~~L~~L~Ls~N~l~--- 204 (317)
T 3o53_A 130 NKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLA--- 204 (317)
T ss_dssp SCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCC---
T ss_pred CCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccccc--ccccccCCEEECCCCcCC---
Confidence 555555555555556666666666666554444442 45555566666655554321 223566666666666665
Q ss_pred chhhhhhhhhhhhhcccCccccCCCcccccccccccccccccccccCCCCcccccccccceeeccCcccc-cchhhhhhc
Q 045798 463 PEDIFNISYLSNSLNLARNHLVGIIPPRIGNLRALRSFDVSNNDLSGEIPIELGHCSSLEEIYLAGNLFH-GSIPSFFNA 541 (1008)
Q Consensus 463 p~~~~~~~~~~~~L~L~~N~l~~~~p~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~p~~~~~ 541 (1008)
.+|..+..+++|+.|+|++|.++ .+|..+..+++|+.|+|++|++. +.+|.++..
T Consensus 205 -----------------------~l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~ 260 (317)
T 3o53_A 205 -----------------------FMGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSK 260 (317)
T ss_dssp -----------------------EECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHT
T ss_pred -----------------------cchhhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhc
Confidence 23333555666667777777666 45666666666777777777666 556666666
Q ss_pred cccccEEecC
Q 045798 542 LKGVQKIDLS 551 (1008)
Q Consensus 542 l~~L~~L~ls 551 (1008)
+++|+.|+++
T Consensus 261 ~~~L~~l~l~ 270 (317)
T 3o53_A 261 NQRVQTVAKQ 270 (317)
T ss_dssp CHHHHHHHHH
T ss_pred cccceEEECC
Confidence 6666666666
No 313
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=2.5e-27 Score=274.89 Aligned_cols=249 Identities=19% Similarity=0.228 Sum_probs=161.1
Q ss_pred CcEEEecCCcCCccCChhhhhhcccceeeeeccccccCCCCCccccccccceEEecCccccCCcchhccCCCCCceEEcc
Q 045798 327 LRVLSLGGNQFRGALPHSIANLSSQLQILILSSNQFYGSIPLGIGNLVDLYLLGMVENQFTGAIPKEMGKLQKLQGLDFS 406 (1008)
Q Consensus 327 L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 406 (1008)
...++.+++.++ .+|..+. +.+++|+|++|+|++..|..|.++++|+.|+|++|+|++..+..|.++++|++|+|+
T Consensus 56 ~~~v~c~~~~l~-~iP~~~~---~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~ 131 (452)
T 3zyi_A 56 FSKVVCTRRGLS-EVPQGIP---SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELF 131 (452)
T ss_dssp SCEEECCSSCCS-SCCSCCC---TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CcEEEECCCCcC-ccCCCCC---CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECC
Confidence 345666666666 5565443 357777777777776667777777777777777777777767777777777777777
Q ss_pred CCcccccccccccCCCCcceeeccccccccccCCCCcCCCcccEeecccccccCCcchhhhhhhhhhhhhcccCccccCC
Q 045798 407 GNHFSGEIPSSLGNLSSLYEVFFNNNNLSGVIPFSLGNLKRLAFLEMSGNELSGTIPEDIFNISYLSNSLNLARNHLVGI 486 (1008)
Q Consensus 407 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~~~~~~~~~~~~L~L~~N~l~~~ 486 (1008)
+|++++..+..|..+++|++|+|++|.+....+..|.++++|+.|+|++|...+.+|...+.....++.|+|++|++++.
T Consensus 132 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~ 211 (452)
T 3zyi_A 132 DNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM 211 (452)
T ss_dssp SSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC
T ss_pred CCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc
Confidence 77777655566777777777777777777666667777777777777774444455555444444445555555555532
Q ss_pred CcccccccccccccccccccccCCCCcccccccccceeeccCcccccchhhhhhccccccEEecCCCcccccccCc-ccc
Q 045798 487 IPPRIGNLRALRSFDVSNNDLSGEIPIELGHCSSLEEIYLAGNLFHGSIPSFFNALKGVQKIDLSRNNLSGQIPIF-LEA 565 (1008)
Q Consensus 487 ~p~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~-~~~ 565 (1008)
| .+..+++|+.|+|++|.+++..|..|..+++|++|+|++|++++..|..|..+++|+.|||++|+|++..+.. ..+
T Consensus 212 -~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 289 (452)
T 3zyi_A 212 -P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPL 289 (452)
T ss_dssp -C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTC
T ss_pred -c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccc
Confidence 2 3555666666666666666555666666666666666666666656666666666666666666666544443 345
Q ss_pred cccceeecccCccccc
Q 045798 566 LSLEYLNLSFNDFEGK 581 (1008)
Q Consensus 566 ~~L~~L~l~~N~l~g~ 581 (1008)
.+|+.|+|++|++...
T Consensus 290 ~~L~~L~L~~Np~~Cd 305 (452)
T 3zyi_A 290 RYLVELHLHHNPWNCD 305 (452)
T ss_dssp TTCCEEECCSSCEECS
T ss_pred cCCCEEEccCCCcCCC
Confidence 5566666666655543
No 314
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.94 E-value=7.4e-27 Score=269.90 Aligned_cols=243 Identities=23% Similarity=0.200 Sum_probs=169.0
Q ss_pred EeccccCCCCccCcCccCCccCCeeeecCCCCCCCCCccccCCCCCCEEEccCCCCCCccCcccccCcCcceEeeecccc
Q 045798 59 LDLMSKSLSGSLSPHLGNLSFLREINLSNNTIQGEIPPEFGRLFRLEALFLSNNSLVGKIPANLSYCSRLTVLCIEYNKL 138 (1008)
Q Consensus 59 l~l~~~~l~~~l~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l 138 (1008)
++..+.+++ .+|..+. ++++.|+|++|++++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|+|
T Consensus 48 v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l 124 (440)
T 3zyj_A 48 VICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRL 124 (440)
T ss_dssp EECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCC
T ss_pred EEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcC
Confidence 444555666 5676655 5788888888888877778888888888888888888877778888888888888888888
Q ss_pred ccCCCccccccCCCCeeecccccCCCCCCCCCccccccchhhcccc-cCCCCCCccccCCCCCcEEEecCCcccccCCcc
Q 045798 139 QGRIPLEFVSLSKLKDLSLAKNKLTGGIPPFLGNLTSLEVLSLAGN-SFGRNIPDSLGQLKQLKILAIGGNNLSGPIPPS 217 (1008)
Q Consensus 139 ~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n-~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 217 (1008)
++..+..|..+++|++|+|++|+++...+..|.++++|++|+|++| .+....+..|..+++|++|+|++|.++. +| .
T Consensus 125 ~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~-~ 202 (440)
T 3zyj_A 125 TTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE-IP-N 202 (440)
T ss_dssp SSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSS-CC-C
T ss_pred CeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcc-cc-c
Confidence 8666667888888888888888888666667888888888888874 4444445567777888888888887773 33 3
Q ss_pred ccCCCCcceeccccccccccCChhhhhcCCCCcEEEeccccCCCCCCcccccCCCCceeecccccccccccccccCCCcc
Q 045798 218 IYNLSFLVVFSVSHNQIHGSLPPSLGLLLPNLKFFQIHHNFFSGSIPISLSNASKLEHIEIANNNFSGKLSVNFGGMKNL 297 (1008)
Q Consensus 218 ~~~l~~L~~L~ls~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 297 (1008)
+..+++|+.|+|++|++++ ++...+..+++|+.|+|++|.+++..+..|.++++|++|+|++|+++...+..|..+++|
T Consensus 203 ~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 281 (440)
T 3zyj_A 203 LTPLIKLDELDLSGNHLSA-IRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHL 281 (440)
T ss_dssp CTTCSSCCEEECTTSCCCE-ECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTC
T ss_pred cCCCcccCEEECCCCccCc-cChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCC
Confidence 6666667777777776663 333333445666666666666665555566666666666666666665555545444444
Q ss_pred cccccccccC
Q 045798 298 SLLNLQFSNL 307 (1008)
Q Consensus 298 ~~L~L~~n~l 307 (1008)
+.|+|++|.+
T Consensus 282 ~~L~L~~Np~ 291 (440)
T 3zyj_A 282 ERIHLHHNPW 291 (440)
T ss_dssp CEEECCSSCE
T ss_pred CEEEcCCCCc
Confidence 4444444443
No 315
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=2.5e-29 Score=292.99 Aligned_cols=217 Identities=20% Similarity=0.198 Sum_probs=118.0
Q ss_pred cceeeeeccccccCCCCCccccccccceEEecCccccCCcchhccCCCCCceEEccCCcccccccccccCCCCcceeecc
Q 045798 351 QLQILILSSNQFYGSIPLGIGNLVDLYLLGMVENQFTGAIPKEMGKLQKLQGLDFSGNHFSGEIPSSLGNLSSLYEVFFN 430 (1008)
Q Consensus 351 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 430 (1008)
+|++|+|++|.+++..|..|..+++|++|+|++|.+++..| +..+++|++|+|++|.|++..+ .++|+.|+++
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~L~ 107 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETLHAA 107 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEEECC
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEEECc
Confidence 46777777777766556666666677777777766665544 6666666677777666663322 2566666666
Q ss_pred ccccccccCCCCcCCCcccEeecccccccCCcchhhhhhhhhhhhhcccCccccCCCcccccccccccccccccccccCC
Q 045798 431 NNNLSGVIPFSLGNLKRLAFLEMSGNELSGTIPEDIFNISYLSNSLNLARNHLVGIIPPRIGNLRALRSFDVSNNDLSGE 510 (1008)
Q Consensus 431 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~~~~~~~~~~~~L~L~~N~l~~~~p~~~~~l~~L~~Ldls~N~l~~~ 510 (1008)
+|.+++..+.. +++|+.|+|++|.+++ ..|..|+.+++|+.|||++|.+++.
T Consensus 108 ~N~l~~~~~~~---l~~L~~L~L~~N~l~~-------------------------~~~~~~~~l~~L~~L~Ls~N~l~~~ 159 (487)
T 3oja_A 108 NNNISRVSCSR---GQGKKNIYLANNKITM-------------------------LRDLDEGCRSRVQYLDLKLNEIDTV 159 (487)
T ss_dssp SSCCCCEEECC---CSSCEEEECCSSCCCS-------------------------GGGBCGGGGSSEEEEECTTSCCCEE
T ss_pred CCcCCCCCccc---cCCCCEEECCCCCCCC-------------------------CCchhhcCCCCCCEEECCCCCCCCc
Confidence 66666554432 3556666666666664 3444444455555555555555544
Q ss_pred CCcccc-cccccceeeccCcccccchhhhhhccccccEEecCCCcccccccCcccccccceeecccCcccccCCCCcccC
Q 045798 511 IPIELG-HCSSLEEIYLAGNLFHGSIPSFFNALKGVQKIDLSRNNLSGQIPIFLEALSLEYLNLSFNDFEGKIPAKGIFA 589 (1008)
Q Consensus 511 ~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~L~~L~l~~N~l~g~~p~~~~~~ 589 (1008)
.|..+. .+++|++|+|++|.|++..+ +..+++|+.|+|++|++++.+|....+.+|+.|+|++|.|++.++....+.
T Consensus 160 ~~~~l~~~l~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~l~~l~ 237 (487)
T 3oja_A 160 NFAELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLVLIEKALRFSQ 237 (487)
T ss_dssp EGGGGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCCEECTTCCCCT
T ss_pred ChHHHhhhCCcccEEecCCCccccccc--cccCCCCCEEECCCCCCCCCCHhHcCCCCccEEEecCCcCcccchhhccCC
Confidence 444443 44555555555555553311 123455555555555555444443444445555555555554333223334
Q ss_pred CcccceeccCCccCC
Q 045798 590 NASAISVVGCNRLCG 604 (1008)
Q Consensus 590 ~~~~~~~~~n~~l~g 604 (1008)
++..+.+.+|+..|+
T Consensus 238 ~L~~L~l~~N~l~c~ 252 (487)
T 3oja_A 238 NLEHFDLRGNGFHCG 252 (487)
T ss_dssp TCCEEECTTCCBCHH
T ss_pred CCCEEEcCCCCCcCc
Confidence 444444455555444
No 316
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.94 E-value=3.4e-27 Score=255.91 Aligned_cols=221 Identities=21% Similarity=0.214 Sum_probs=146.7
Q ss_pred EEEeccccCCCCccCcCccCCccCCeeeecCCCCCCCCCccccCCCCCCEEEccCCCCCCccCcccccCcCcceEeeecc
Q 045798 57 TALDLMSKSLSGSLSPHLGNLSFLREINLSNNTIQGEIPPEFGRLFRLEALFLSNNSLVGKIPANLSYCSRLTVLCIEYN 136 (1008)
Q Consensus 57 ~~l~l~~~~l~~~l~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n 136 (1008)
+.++.++++++ .+|..+ .++|++|+|++|++++..+..|..+++|++|+|++|.+++..|..|+.+++|++|+|++|
T Consensus 14 ~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 45666677776 455544 357888888888888777777888888888888888888777888888888888888888
Q ss_pred c-cccCCCccccccCCCCeeecccccCCCCCCCCCccccccchhhcccccCCCCCCccccCCCCCcEEEecCCcccccCC
Q 045798 137 K-LQGRIPLEFVSLSKLKDLSLAKNKLTGGIPPFLGNLTSLEVLSLAGNSFGRNIPDSLGQLKQLKILAIGGNNLSGPIP 215 (1008)
Q Consensus 137 ~-l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 215 (1008)
. +....|..|..+++|++|++++|++++..|..|.++++|++|++++|++++..+..|+.+++|++|++++|.+++..+
T Consensus 91 ~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 170 (285)
T 1ozn_A 91 AQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPE 170 (285)
T ss_dssp TTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECT
T ss_pred CCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCH
Confidence 6 776667777778888888888888876667777777777777777777766666667777777777777777775555
Q ss_pred ccccCCCCcceeccccccccccCChhhhhcCCCCcEEEeccccCCCCCCcccccCCCCceeecccc
Q 045798 216 PSIYNLSFLVVFSVSHNQIHGSLPPSLGLLLPNLKFFQIHHNFFSGSIPISLSNASKLEHIEIANN 281 (1008)
Q Consensus 216 ~~~~~l~~L~~L~ls~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N 281 (1008)
..|..+++|+.|++++|.+++..|..+ ..+++|+.|+|++|.+++..+..+..+++|++|++++|
T Consensus 171 ~~~~~l~~L~~L~l~~n~l~~~~~~~~-~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 235 (285)
T 1ozn_A 171 RAFRGLHSLDRLLLHQNRVAHVHPHAF-RDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDN 235 (285)
T ss_dssp TTTTTCTTCCEEECCSSCCCEECTTTT-TTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSS
T ss_pred HHhcCccccCEEECCCCcccccCHhHc-cCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCC
Confidence 556666666666666666553323222 22334444444444443322233333333333333333
No 317
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.94 E-value=9.3e-27 Score=269.06 Aligned_cols=225 Identities=19% Similarity=0.187 Sum_probs=183.7
Q ss_pred CCeeeecCCCCCCCCCccccCCCCCCEEEccCCCCCCccCcccccCcCcceEeeeccccccCCCccccccCCCCeeeccc
Q 045798 80 LREINLSNNTIQGEIPPEFGRLFRLEALFLSNNSLVGKIPANLSYCSRLTVLCIEYNKLQGRIPLEFVSLSKLKDLSLAK 159 (1008)
Q Consensus 80 L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~ 159 (1008)
.+.++.++++++ .+|..+. +++++|+|++|++++..+..|.++++|++|+|++|+|++..+..|.++++|++|+|++
T Consensus 45 ~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~ 121 (440)
T 3zyj_A 45 FSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFD 121 (440)
T ss_dssp SCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCS
T ss_pred CCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCC
Confidence 467888999998 7787665 7899999999999988889999999999999999999988888999999999999999
Q ss_pred ccCCCCCCCCCccccccchhhcccccCCCCCCccccCCCCCcEEEecC-CcccccCCccccCCCCcceeccccccccccC
Q 045798 160 NKLTGGIPPFLGNLTSLEVLSLAGNSFGRNIPDSLGQLKQLKILAIGG-NNLSGPIPPSIYNLSFLVVFSVSHNQIHGSL 238 (1008)
Q Consensus 160 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~-n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~l 238 (1008)
|+++...+..|.++++|++|+|++|++....+..|..+++|++|++++ |.+....+..|.++++|++|++++|+++ .+
T Consensus 122 n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~ 200 (440)
T 3zyj_A 122 NRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EI 200 (440)
T ss_dssp SCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SC
T ss_pred CcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-cc
Confidence 999977677899999999999999999887788899999999999998 4555555667888899999999999887 66
Q ss_pred ChhhhhcCCCCcEEEeccccCCCCCCcccccCCCCceeecccccccccccccccCCCcccccccccccCCCC
Q 045798 239 PPSLGLLLPNLKFFQIHHNFFSGSIPISLSNASKLEHIEIANNNFSGKLSVNFGGMKNLSLLNLQFSNLGSG 310 (1008)
Q Consensus 239 p~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 310 (1008)
|. +..+++|+.|+|++|.+++..|..|.++++|+.|++++|++.+..+..|.++++|+.|+|++|+++.+
T Consensus 201 ~~--~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 270 (440)
T 3zyj_A 201 PN--LTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLL 270 (440)
T ss_dssp CC--CTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCC
T ss_pred cc--cCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCcc
Confidence 64 34467777777777777777777777777777777777777776666666665555555555555543
No 318
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.94 E-value=2.4e-26 Score=272.69 Aligned_cols=141 Identities=29% Similarity=0.380 Sum_probs=70.9
Q ss_pred ccceEEecCccccCCcchhccCCCCCceEEccCCcccccccccccCCCCcceeeccccccccccCCCCcCCCcccEeecc
Q 045798 375 DLYLLGMVENQFTGAIPKEMGKLQKLQGLDFSGNHFSGEIPSSLGNLSSLYEVFFNNNNLSGVIPFSLGNLKRLAFLEMS 454 (1008)
Q Consensus 375 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls 454 (1008)
+|+.|++++|.+++ +| ..+++|+.|+|++|++++ +|.. +++|+.|++++|.++. +|.. +++|+.|+|+
T Consensus 162 ~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~~-l~~~---~~~L~~L~Ls 229 (622)
T 3g06_A 162 ELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTS-LPAL---PSGLKELIVS 229 (622)
T ss_dssp TCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSS-CCCC---CTTCCEEECC
T ss_pred CCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCcccc-cCCC---CCCCCEEEcc
Confidence 44444555555443 22 234555566666665552 3332 2455556666666552 3322 3556666666
Q ss_pred cccccCCcchhhhhhhhhhhhhcccCccccCCCcccccccccccccccccccccCCCCcccccccccceeeccCcccccc
Q 045798 455 GNELSGTIPEDIFNISYLSNSLNLARNHLVGIIPPRIGNLRALRSFDVSNNDLSGEIPIELGHCSSLEEIYLAGNLFHGS 534 (1008)
Q Consensus 455 ~N~l~~~lp~~~~~~~~~~~~L~L~~N~l~~~~p~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 534 (1008)
+|++++ +| ..+++|+.|+|++|.|+ .+|. .+++|+.|+|++|+|+ .
T Consensus 230 ~N~L~~-lp----------------------------~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~ 275 (622)
T 3g06_A 230 GNRLTS-LP----------------------------VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-R 275 (622)
T ss_dssp SSCCSC-CC----------------------------CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-S
T ss_pred CCccCc-CC----------------------------CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-c
Confidence 666652 22 12244555555555555 3443 3445555555555555 4
Q ss_pred hhhhhhccccccEEecCCCcccccccC
Q 045798 535 IPSFFNALKGVQKIDLSRNNLSGQIPI 561 (1008)
Q Consensus 535 ~p~~~~~l~~L~~L~ls~N~l~~~~p~ 561 (1008)
+|..|..+++|+.|+|++|++++.+|.
T Consensus 276 lp~~l~~l~~L~~L~L~~N~l~~~~~~ 302 (622)
T 3g06_A 276 LPESLIHLSSETTVNLEGNPLSERTLQ 302 (622)
T ss_dssp CCGGGGGSCTTCEEECCSCCCCHHHHH
T ss_pred CCHHHhhccccCEEEecCCCCCCcCHH
Confidence 455555555555555555555554443
No 319
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.94 E-value=2.2e-26 Score=247.07 Aligned_cols=217 Identities=25% Similarity=0.319 Sum_probs=176.0
Q ss_pred CCCCcccceEEcCCCCeEEEEeccccCCCCccCcCccCCccCCeeeecCCCCCCCCCccccCCCCCCEEEccCCCCCCcc
Q 045798 39 RHFCEWEGITCGRRHRRVTALDLMSKSLSGSLSPHLGNLSFLREINLSNNTIQGEIPPEFGRLFRLEALFLSNNSLVGKI 118 (1008)
Q Consensus 39 ~~~c~w~gv~c~~~~~~v~~l~l~~~~l~~~l~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~ 118 (1008)
.++|.|.|+.|... ..++.+|++++.++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|.++...
T Consensus 2 ~~~C~~~~~~C~c~-~~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~ 77 (270)
T 2o6q_A 2 EALCKKDGGVCSCN-NNKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLP 77 (270)
T ss_dssp CCCBGGGTCSBEEE-TTTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCC
T ss_pred CccCCCCCCCCEeC-CCCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeC
Confidence 48999999988643 23567889999888 5776665 67899999999999777778999999999999999998666
Q ss_pred CcccccCcCcceEeeeccccccCCCccccccCCCCeeecccccCCCCCCCCCccccccchhhcccccCCCCCCccccCCC
Q 045798 119 PANLSYCSRLTVLCIEYNKLQGRIPLEFVSLSKLKDLSLAKNKLTGGIPPFLGNLTSLEVLSLAGNSFGRNIPDSLGQLK 198 (1008)
Q Consensus 119 p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 198 (1008)
+..|..+++|++|+|++|++++..+..|..+++|++|++++|++++..+..|+++++|++|+|++|++++..+..|..++
T Consensus 78 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 157 (270)
T 2o6q_A 78 AGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLT 157 (270)
T ss_dssp TTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred hhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCc
Confidence 66678899999999999999877777788889999999999999877777788888888888888888777777788888
Q ss_pred CCcEEEecCCcccccCCccccCCCCcceeccccccccccCChhhhhcCCCCcEEEeccccCC
Q 045798 199 QLKILAIGGNNLSGPIPPSIYNLSFLVVFSVSHNQIHGSLPPSLGLLLPNLKFFQIHHNFFS 260 (1008)
Q Consensus 199 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~ 260 (1008)
+|+.|+|++|.+++..+..|.++++|+.|++++|+++ .+|...+..+++|+.|+|++|.+.
T Consensus 158 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~l~~N~~~ 218 (270)
T 2o6q_A 158 SLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLK-RVPEGAFDSLEKLKMLQLQENPWD 218 (270)
T ss_dssp TCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCS-CCCTTTTTTCTTCCEEECCSSCBC
T ss_pred ccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCC-cCCHHHhccccCCCEEEecCCCee
Confidence 8888888888888777777888888888888888877 566655555667777777777665
No 320
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.94 E-value=3.6e-28 Score=286.75 Aligned_cols=185 Identities=15% Similarity=0.044 Sum_probs=130.3
Q ss_pred EeeccCeeEEEEEEcCCCeEEEEEEecccc----------chhhHHHHHHHHHHhhc-CCCCceeeeeccccccccCCce
Q 045798 692 IGVGSFGCVYKGALDEDGIVVAIKVINLQC----------EGASKSFMAECKALKNI-RHRNLVKVITSCSSIDFQGNDF 760 (1008)
Q Consensus 692 lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~----------~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~ 760 (1008)
.+.|++|.+..++..-.|+.||+|++.... +...++|.+|+++|+++ .|+||++++++ ++++..
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~-----~ed~~~ 316 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAH-----GENAQS 316 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEE-----EECSSE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEE-----EEECCE
Confidence 556667777666665578899999996432 22335799999999999 79999999999 577888
Q ss_pred EEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeEE
Q 045798 761 KAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGHI 840 (1008)
Q Consensus 761 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 840 (1008)
.||||||++|++|.+++...+ +++.. +|+.||+.||+|+|++ |||||||||+|||++++|.+||
T Consensus 317 ~yLVMEyv~G~~L~d~i~~~~----------~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL 380 (569)
T 4azs_A 317 GWLVMEKLPGRLLSDMLAAGE----------EIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARL 380 (569)
T ss_dssp EEEEEECCCSEEHHHHHHTTC----------CCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEE
T ss_pred EEEEEecCCCCcHHHHHHhCC----------CCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEE
Confidence 999999999999999998664 45554 4899999999999998 9999999999999999999999
Q ss_pred cccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCC
Q 045798 841 GDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKP 902 (1008)
Q Consensus 841 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~p 902 (1008)
+|||+|+........ ....+||++|+|||++.+ .+..++|+||+|++++++.+|..+
T Consensus 381 ~DFGlAr~~~~~~~~----~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 381 IDFGSIVTTPQDCSW----PTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp CCCTTEESCC---CC----SHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred eecccCeeCCCCCcc----ccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 999999866543222 233569999999999876 467789999999998887666544
No 321
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.94 E-value=9.3e-28 Score=264.31 Aligned_cols=248 Identities=19% Similarity=0.260 Sum_probs=171.5
Q ss_pred ccCCCcEEEecCCcCCccCChhhhhhcccceeeeeccccccCCCCCccccccccceEEecCccccCCcchhccCCCCCce
Q 045798 323 NCSKLRVLSLGGNQFRGALPHSIANLSSQLQILILSSNQFYGSIPLGIGNLVDLYLLGMVENQFTGAIPKEMGKLQKLQG 402 (1008)
Q Consensus 323 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 402 (1008)
.+++|+.|+|++|++++..|..+..+. +|++|+|++|.+++..+ +..+++|++|++++|++++.. ..++|+.
T Consensus 32 ~~~~L~~L~L~~n~l~~~~~~~~~~l~-~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l~-----~~~~L~~ 103 (317)
T 3o53_A 32 SAWNVKELDLSGNPLSQISAADLAPFT-KLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPSIET 103 (317)
T ss_dssp TGGGCSEEECTTSCCCCCCHHHHTTCT-TCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEEE-----ECTTCCE
T ss_pred cCCCCCEEECcCCccCcCCHHHhhCCC-cCCEEECCCCcCCcchh--hhhcCCCCEEECcCCcccccc-----CCCCcCE
Confidence 344566666666666655455555554 46666666666664433 666666677777666666422 2366777
Q ss_pred EEccCCcccccccccccCCCCcceeeccccccccccCCCCcCCCcccEeecccccccCCcchhhhhhhhhhhhhcccCcc
Q 045798 403 LDFSGNHFSGEIPSSLGNLSSLYEVFFNNNNLSGVIPFSLGNLKRLAFLEMSGNELSGTIPEDIFNISYLSNSLNLARNH 482 (1008)
Q Consensus 403 L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~~~~~~~~~~~~L~L~~N~ 482 (1008)
|++++|++++..+.. +++|++|++++|.+++..|..+..+++|++|+|++|++++..|..++.....++.|+|++|.
T Consensus 104 L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~ 180 (317)
T 3o53_A 104 LHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNF 180 (317)
T ss_dssp EECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSC
T ss_pred EECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCc
Confidence 777777776544333 45566777777777766666666677777777777777644444444334445666666666
Q ss_pred ccCCCcccccccccccccccccccccCCCCcccccccccceeeccCcccccchhhhhhccccccEEecCCCccc-ccccC
Q 045798 483 LVGIIPPRIGNLRALRSFDVSNNDLSGEIPIELGHCSSLEEIYLAGNLFHGSIPSFFNALKGVQKIDLSRNNLS-GQIPI 561 (1008)
Q Consensus 483 l~~~~p~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~-~~~p~ 561 (1008)
+++. | ....+++|+.|+|++|.++ .+|..+..+++|++|+|++|+|+ .+|..+..+++|+.|+|++|+++ +.+|.
T Consensus 181 l~~~-~-~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~ 256 (317)
T 3o53_A 181 IYDV-K-GQVVFAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRD 256 (317)
T ss_dssp CCEE-E-CCCCCTTCCEEECCSSCCC-EECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHH
T ss_pred Cccc-c-cccccccCCEEECCCCcCC-cchhhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHH
Confidence 6644 3 2335889999999999998 56667899999999999999999 57888999999999999999998 66666
Q ss_pred c-ccccccceeecc-cCcccccCCCC
Q 045798 562 F-LEALSLEYLNLS-FNDFEGKIPAK 585 (1008)
Q Consensus 562 ~-~~~~~L~~L~l~-~N~l~g~~p~~ 585 (1008)
+ ..+..|+.|+++ .+.++|..|..
T Consensus 257 ~~~~~~~L~~l~l~~~~~l~~~~~~~ 282 (317)
T 3o53_A 257 FFSKNQRVQTVAKQTVKKLTGQNEEE 282 (317)
T ss_dssp HHHTCHHHHHHHHHHHHHHHSSSSCC
T ss_pred HHhccccceEEECCCchhccCCchhc
Confidence 6 567789999998 66788877754
No 322
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.93 E-value=8.3e-27 Score=271.70 Aligned_cols=237 Identities=20% Similarity=0.254 Sum_probs=167.1
Q ss_pred ccCCCcEEEecCCcCCccCChhhhhhcccceeeeeccccccCCCCCccccccccceEEecCccccCCcchhccCCCCCce
Q 045798 323 NCSKLRVLSLGGNQFRGALPHSIANLSSQLQILILSSNQFYGSIPLGIGNLVDLYLLGMVENQFTGAIPKEMGKLQKLQG 402 (1008)
Q Consensus 323 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 402 (1008)
.+++|+.|+|++|.+++..|..+..+. +|++|+|++|.+++..| +..+++|++|+|++|.|++..+ .++|+.
T Consensus 32 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~ 103 (487)
T 3oja_A 32 SAWNVKELDLSGNPLSQISAADLAPFT-KLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIET 103 (487)
T ss_dssp TGGGCCEEECCSSCCCCCCGGGGTTCT-TCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCE
T ss_pred cCCCccEEEeeCCcCCCCCHHHHhCCC-CCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCE
Confidence 345889999999999877777887776 59999999999986665 8889999999999999885433 388999
Q ss_pred EEccCCcccccccccccCCCCcceeeccccccccccCCCCcCCCcccEeecccccccCCcchhhhhhhhhhhhhcccCcc
Q 045798 403 LDFSGNHFSGEIPSSLGNLSSLYEVFFNNNNLSGVIPFSLGNLKRLAFLEMSGNELSGTIPEDIFNISYLSNSLNLARNH 482 (1008)
Q Consensus 403 L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~~~~~~~~~~~~L~L~~N~ 482 (1008)
|+|++|.+++..+.. +++|+.|+|++|.+++..|..|+.+++|+.|+|++|.+++..|..+......++.|+|++|.
T Consensus 104 L~L~~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~ 180 (487)
T 3oja_A 104 LHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNF 180 (487)
T ss_dssp EECCSSCCCCEEECC---CSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSC
T ss_pred EECcCCcCCCCCccc---cCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCc
Confidence 999999998766543 57889999999999988888899999999999999999865555554333444556666666
Q ss_pred ccCCCcccccccccccccccccccccCCCCcccccccccceeeccCcccccchhhhhhccccccEEecCCCccc-ccccC
Q 045798 483 LVGIIPPRIGNLRALRSFDVSNNDLSGEIPIELGHCSSLEEIYLAGNLFHGSIPSFFNALKGVQKIDLSRNNLS-GQIPI 561 (1008)
Q Consensus 483 l~~~~p~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~-~~~p~ 561 (1008)
+++. | .+..+++|+.|||++|.+++ +|..++.+++|+.|+|++|.|++ +|..+..+++|+.|+|++|+++ +.+|.
T Consensus 181 l~~~-~-~~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~ 256 (487)
T 3oja_A 181 IYDV-K-GQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRD 256 (487)
T ss_dssp CCEE-E-CCCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHH
T ss_pred cccc-c-ccccCCCCCEEECCCCCCCC-CCHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHH
Confidence 5544 2 23346666666666666663 44446666666666666666663 5555666666666666666666 34444
Q ss_pred c-ccccccceeecc
Q 045798 562 F-LEALSLEYLNLS 574 (1008)
Q Consensus 562 ~-~~~~~L~~L~l~ 574 (1008)
+ ..+..|+.|+++
T Consensus 257 ~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 257 FFSKNQRVQTVAKQ 270 (487)
T ss_dssp HHTTCHHHHHHHHH
T ss_pred HHHhCCCCcEEecc
Confidence 3 334445555554
No 323
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.93 E-value=9.2e-29 Score=298.49 Aligned_cols=442 Identities=15% Similarity=0.103 Sum_probs=218.0
Q ss_pred CeeeecCCCCCCCCCccccCCCCCCEEEccCCCCC---CccCcc------------cccCcCcceEeeeccccccCCCcc
Q 045798 81 REINLSNNTIQGEIPPEFGRLFRLEALFLSNNSLV---GKIPAN------------LSYCSRLTVLCIEYNKLQGRIPLE 145 (1008)
Q Consensus 81 ~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~---~~~p~~------------l~~l~~L~~L~Ls~n~l~~~~p~~ 145 (1008)
+.++++++... .....+..+++|++|+|++|... +..|.. ...+++|++|+|++|.+++..+..
T Consensus 46 ~~l~~~~~~~~-~~~~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~~~~~ 124 (594)
T 2p1m_B 46 RKVFIGNCYAV-SPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLEL 124 (594)
T ss_dssp CEEEESSTTSS-CHHHHHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHH
T ss_pred eEEeecccccc-CHHHHHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCCeEEeeCcEEcHHHHHH
Confidence 45666554332 22335677899999999998632 122221 235677888888888777666666
Q ss_pred cc-ccCCCCeeecccc-cCCCC-CCCCCccccccchhhcccccCCCCCCcccc----CCCCCcEEEecCCc--ccc-cCC
Q 045798 146 FV-SLSKLKDLSLAKN-KLTGG-IPPFLGNLTSLEVLSLAGNSFGRNIPDSLG----QLKQLKILAIGGNN--LSG-PIP 215 (1008)
Q Consensus 146 ~~-~l~~L~~L~L~~n-~l~~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~----~l~~L~~L~L~~n~--l~~-~~~ 215 (1008)
+. .+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+.++. .+++|+.|++++|. ++. .+.
T Consensus 125 l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~l~ 204 (594)
T 2p1m_B 125 IAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSALE 204 (594)
T ss_dssp HHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCCSCCCHHHHH
T ss_pred HHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccCCcCCHHHHH
Confidence 65 5777888888777 44421 233334566677777777666544433333 44466666666654 110 011
Q ss_pred ccccCCCCcceeccccc-cccccCChhhhhcCCCCcEEEeccccCCCCCCcccccCCCCceeecccccccccccccccCC
Q 045798 216 PSIYNLSFLVVFSVSHN-QIHGSLPPSLGLLLPNLKFFQIHHNFFSGSIPISLSNASKLEHIEIANNNFSGKLSVNFGGM 294 (1008)
Q Consensus 216 ~~~~~l~~L~~L~ls~N-~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l 294 (1008)
..+.++++|+.|++++| .+. .++..+ ..+++|+.|+++.+... ++.|.+.+.. ..+.++
T Consensus 205 ~l~~~~~~L~~L~L~~~~~~~-~l~~~~-~~~~~L~~L~l~~~~~~-----------------~~~~~~~~l~-~~l~~~ 264 (594)
T 2p1m_B 205 RLVTRCPNLKSLKLNRAVPLE-KLATLL-QRAPQLEELGTGGYTAE-----------------VRPDVYSGLS-VALSGC 264 (594)
T ss_dssp HHHHHCTTCCEEECCTTSCHH-HHHHHH-HHCTTCSEEECSBCCCC-----------------CCHHHHHHHH-HHHHTC
T ss_pred HHHHhCCCCcEEecCCCCcHH-HHHHHH-hcCCcceEcccccccCc-----------------cchhhHHHHH-HHHhcC
Confidence 11223355555555554 222 222222 22444444443322110 2222233221 234444
Q ss_pred Cccccc-ccccccCCCCCCCcccccccccccCCCcEEEecCCcCCccCChhhhhhcccceeeeeccccccC-CCCCcccc
Q 045798 295 KNLSLL-NLQFSNLGSGESDEMGFMNSLTNCSKLRVLSLGGNQFRGALPHSIANLSSQLQILILSSNQFYG-SIPLGIGN 372 (1008)
Q Consensus 295 ~~L~~L-~L~~n~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~-~~p~~~~~ 372 (1008)
++|+.| .+.... ...++..+..+++|+.|++++|.+++.....+....++|++|++++| +.. .++.....
T Consensus 265 ~~L~~Ls~~~~~~-------~~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~ 336 (594)
T 2p1m_B 265 KELRCLSGFWDAV-------PAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLAST 336 (594)
T ss_dssp TTCCEEECCBTCC-------GGGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHH
T ss_pred CCcccccCCcccc-------hhhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHh
Confidence 444444 121100 01112222345556666666665443222221111124555555555 221 11111223
Q ss_pred ccccceEEec---------CccccCCcchhcc-CCCCCceEEccCCccccccccccc-CCCCcceeecc--c----cccc
Q 045798 373 LVDLYLLGMV---------ENQFTGAIPKEMG-KLQKLQGLDFSGNHFSGEIPSSLG-NLSSLYEVFFN--N----NNLS 435 (1008)
Q Consensus 373 l~~L~~L~L~---------~n~l~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~l~--~----N~l~ 435 (1008)
+++|+.|++. .+.+++.....+. .+++|+.|+++.|.+++..+..+. .+++|+.|+++ + |.++
T Consensus 337 ~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~ 416 (594)
T 2p1m_B 337 CKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLT 416 (594)
T ss_dssp CTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTT
T ss_pred CCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCccccc
Confidence 4555555552 2333322222222 255666666666666544444333 35556666665 2 3333
Q ss_pred c-----ccCCCCcCCCcccEeecccccccCCcchhhhhhhhhhhhhcccCccccCCCcccccc-cccccccccccccccC
Q 045798 436 G-----VIPFSLGNLKRLAFLEMSGNELSGTIPEDIFNISYLSNSLNLARNHLVGIIPPRIGN-LRALRSFDVSNNDLSG 509 (1008)
Q Consensus 436 ~-----~~p~~~~~l~~L~~L~Ls~N~l~~~lp~~~~~~~~~~~~L~L~~N~l~~~~p~~~~~-l~~L~~Ldls~N~l~~ 509 (1008)
. .++..+..+++|+.|+|++ .++ +..+..++. +++|+.|+|++|.+++
T Consensus 417 ~~~~~~~~~~l~~~~~~L~~L~L~~-~l~-------------------------~~~~~~l~~~~~~L~~L~L~~~~i~~ 470 (594)
T 2p1m_B 417 LEPLDIGFGAIVEHCKDLRRLSLSG-LLT-------------------------DKVFEYIGTYAKKMEMLSVAFAGDSD 470 (594)
T ss_dssp CCCTHHHHHHHHHHCTTCCEEECCS-SCC-------------------------HHHHHHHHHHCTTCCEEEEESCCSSH
T ss_pred CCchhhHHHHHHhhCCCccEEeecC-ccc-------------------------HHHHHHHHHhchhccEeeccCCCCcH
Confidence 1 1111234455666666654 333 222333333 6778888888888765
Q ss_pred CCCccc-ccccccceeeccCcccccchhh-hhhccccccEEecCCCcccccccCc--ccccccceeecccCc
Q 045798 510 EIPIEL-GHCSSLEEIYLAGNLFHGSIPS-FFNALKGVQKIDLSRNNLSGQIPIF--LEALSLEYLNLSFND 577 (1008)
Q Consensus 510 ~~p~~~-~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~ls~N~l~~~~p~~--~~~~~L~~L~l~~N~ 577 (1008)
..+..+ ..+++|++|+|++|++++..+. .+..+++|+.|++++|+++..-... ..+..|+...+..+.
T Consensus 471 ~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~lp~l~i~~~~~~~ 542 (594)
T 2p1m_B 471 LGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDERG 542 (594)
T ss_dssp HHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCBHHHHHHHHHHCTTEEEEEECSSS
T ss_pred HHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCCHHHHHHHHHhCCCCEEEEecCCC
Confidence 544444 5578888888888888655443 4455788888888888875322211 123345444555443
No 324
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.92 E-value=6.9e-29 Score=299.60 Aligned_cols=451 Identities=14% Similarity=0.094 Sum_probs=280.6
Q ss_pred CCCcccceEEcCCCCeEEEEeccccCCCCccCcCccCCccCCeeeecCCCCC---CCCCcc------------ccCCCCC
Q 045798 40 HFCEWEGITCGRRHRRVTALDLMSKSLSGSLSPHLGNLSFLREINLSNNTIQ---GEIPPE------------FGRLFRL 104 (1008)
Q Consensus 40 ~~c~w~gv~c~~~~~~v~~l~l~~~~l~~~l~~~l~~l~~L~~L~L~~n~~~---~~~p~~------------~~~l~~L 104 (1008)
-|++|.++... ....+++...... .....+..+++|++|+|+++... +..|.. +..+++|
T Consensus 33 vck~W~~~~~~----~~~~l~~~~~~~~-~~~~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L 107 (594)
T 2p1m_B 33 VCKSWYEIERW----CRRKVFIGNCYAV-SPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWL 107 (594)
T ss_dssp SCHHHHHHHHH----HCCEEEESSTTSS-CHHHHHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTC
T ss_pred HHHHHHHhhhh----hceEEeecccccc-CHHHHHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCC
Confidence 35579888221 1234455433222 12234567889999999987532 122222 2467899
Q ss_pred CEEEccCCCCCCccCcccc-cCcCcceEeeecc-ccccC-CCccccccCCCCeeecccccCCCCCCCCC----ccccccc
Q 045798 105 EALFLSNNSLVGKIPANLS-YCSRLTVLCIEYN-KLQGR-IPLEFVSLSKLKDLSLAKNKLTGGIPPFL----GNLTSLE 177 (1008)
Q Consensus 105 ~~L~Ls~n~l~~~~p~~l~-~l~~L~~L~Ls~n-~l~~~-~p~~~~~l~~L~~L~L~~n~l~~~~~~~~----~~l~~L~ 177 (1008)
++|+|++|.+++..+..+. .+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+ ..+++|+
T Consensus 108 ~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~ 187 (594)
T 2p1m_B 108 EEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLV 187 (594)
T ss_dssp CEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCC
T ss_pred CeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCc
Confidence 9999999999987777776 7899999999999 55532 44455579999999999999886554444 3667999
Q ss_pred hhhcccccCCCCCCcc----ccCCCCCcEEEecCC-cccccCCccccCCCCcceeccccc-------cccccCChhhhhc
Q 045798 178 VLSLAGNSFGRNIPDS----LGQLKQLKILAIGGN-NLSGPIPPSIYNLSFLVVFSVSHN-------QIHGSLPPSLGLL 245 (1008)
Q Consensus 178 ~L~L~~n~l~~~~~~~----~~~l~~L~~L~L~~n-~l~~~~~~~~~~l~~L~~L~ls~N-------~l~~~lp~~~~~~ 245 (1008)
+|++++|. ....... +..+++|++|++++| .+++ ++..+..+++|+.|+++.+ .+. .++..+ ..
T Consensus 188 ~L~l~~~~-~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~-~l~~~l-~~ 263 (594)
T 2p1m_B 188 SLNISCLA-SEVSFSALERLVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGGYTAEVRPDVYS-GLSVAL-SG 263 (594)
T ss_dssp EEECTTCC-SCCCHHHHHHHHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSBCCCCCCHHHHH-HHHHHH-HT
T ss_pred EEEecccC-CcCCHHHHHHHHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEcccccccCccchhhHH-HHHHHH-hc
Confidence 99999997 2222222 345799999999998 4444 7788889999999995544 444 344433 45
Q ss_pred CCCCcEE-EeccccCCCCCCcccccCCCCceeecccccccccccc-cccCCCcccccccccccCCCCCCCcccccccccc
Q 045798 246 LPNLKFF-QIHHNFFSGSIPISLSNASKLEHIEIANNNFSGKLSV-NFGGMKNLSLLNLQFSNLGSGESDEMGFMNSLTN 323 (1008)
Q Consensus 246 l~~L~~L-~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~ 323 (1008)
+++|+.| .+.+... ..++..+..+++|++|++++|.+.+.... .+..+++|+.|++++| +.. ..+......
T Consensus 264 ~~~L~~Ls~~~~~~~-~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~-----~~l~~l~~~ 336 (594)
T 2p1m_B 264 CKELRCLSGFWDAVP-AYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IED-----AGLEVLAST 336 (594)
T ss_dssp CTTCCEEECCBTCCG-GGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHH-----HHHHHHHHH
T ss_pred CCCcccccCCcccch-hhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCH-----HHHHHHHHh
Confidence 7888888 4443332 24455555778888899888886644322 2456778888888766 321 111112234
Q ss_pred cCCCcEEEecC---------CcCCccCChhhhhhcccceeeeeccccccCCCCCccc-cccccceEEec--C----cccc
Q 045798 324 CSKLRVLSLGG---------NQFRGALPHSIANLSSQLQILILSSNQFYGSIPLGIG-NLVDLYLLGMV--E----NQFT 387 (1008)
Q Consensus 324 l~~L~~L~Ls~---------N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~L~--~----n~l~ 387 (1008)
+++|+.|++++ +.+++.....+....++|+.|+++.|.+++..+..+. .+++|+.|+++ + |.++
T Consensus 337 ~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~ 416 (594)
T 2p1m_B 337 CKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLT 416 (594)
T ss_dssp CTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTT
T ss_pred CCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCccccc
Confidence 67788887733 4444332233332223577777777776644444443 46677777776 3 4444
Q ss_pred CC-----cchhccCCCCCceEEccCCcccccccccccC-CCCcceeeccccccccccCCCC-cCCCcccEeecccccccC
Q 045798 388 GA-----IPKEMGKLQKLQGLDFSGNHFSGEIPSSLGN-LSSLYEVFFNNNNLSGVIPFSL-GNLKRLAFLEMSGNELSG 460 (1008)
Q Consensus 388 ~~-----~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~l~~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~ 460 (1008)
+. ++..+..+++|+.|+|++ .+++..+..+.. +++|+.|+|++|.+++..+..+ ..+++|+.|+|++|.+++
T Consensus 417 ~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~ 495 (594)
T 2p1m_B 417 LEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGD 495 (594)
T ss_dssp CCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCH
T ss_pred CCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcH
Confidence 21 122255566777777766 555444444443 5667777777776654433333 446667777777666642
Q ss_pred CcchhhhhhhhhhhhhcccCccccCCCc-ccccccccccccccccccccCCCCccc-ccccccceeeccCcccc
Q 045798 461 TIPEDIFNISYLSNSLNLARNHLVGIIP-PRIGNLRALRSFDVSNNDLSGEIPIEL-GHCSSLEEIYLAGNLFH 532 (1008)
Q Consensus 461 ~lp~~~~~~~~~~~~L~L~~N~l~~~~p-~~~~~l~~L~~Ldls~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~ 532 (1008)
..+ ..+..+++|+.|++++|.++......+ ..++.|+...+..+.-.
T Consensus 496 -------------------------~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~lp~l~i~~~~~~~~~ 544 (594)
T 2p1m_B 496 -------------------------KALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDERGAP 544 (594)
T ss_dssp -------------------------HHHHHTGGGGGGSSEEEEESSCCBHHHHHHHHHHCTTEEEEEECSSSCG
T ss_pred -------------------------HHHHHHHHhCCCCCEEeeeCCCCCHHHHHHHHHhCCCCEEEEecCCCcc
Confidence 111 233457889999999998854333333 34677777777666443
No 325
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.92 E-value=1.7e-24 Score=233.43 Aligned_cols=213 Identities=19% Similarity=0.179 Sum_probs=172.5
Q ss_pred ccCcCccCCccCCeeeecCCCCCCCCCccccCCCCCCEEEccCCCCCCccCcccccCcCcceEeeeccccccCCCccccc
Q 045798 69 SLSPHLGNLSFLREINLSNNTIQGEIPPEFGRLFRLEALFLSNNSLVGKIPANLSYCSRLTVLCIEYNKLQGRIPLEFVS 148 (1008)
Q Consensus 69 ~l~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~ 148 (1008)
.+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|+.+++|++|+|++|++++..+..|.+
T Consensus 21 ~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 98 (276)
T 2z62_A 21 KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSG 98 (276)
T ss_dssp SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTT
T ss_pred ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcC
Confidence 4666554 47999999999999777778999999999999999999777778999999999999999999888888999
Q ss_pred cCCCCeeecccccCCCCCCCCCccccccchhhcccccCCCC-CCccccCCCCCcEEEecCCcccccCCccccCCCCcc--
Q 045798 149 LSKLKDLSLAKNKLTGGIPPFLGNLTSLEVLSLAGNSFGRN-IPDSLGQLKQLKILAIGGNNLSGPIPPSIYNLSFLV-- 225 (1008)
Q Consensus 149 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~-- 225 (1008)
+++|++|++++|++++..+..++++++|++|++++|++.+. +|..|..+++|++|++++|++++..+..+..+++|+
T Consensus 99 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l 178 (276)
T 2z62_A 99 LSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLL 178 (276)
T ss_dssp CTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTC
T ss_pred CccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhcccc
Confidence 99999999999999977776889999999999999998764 588899999999999999999887777777777776
Q ss_pred --eeccccccccccCChhhhhcCCCCcEEEeccccCCCCCCcccccCCCCceeecccccccc
Q 045798 226 --VFSVSHNQIHGSLPPSLGLLLPNLKFFQIHHNFFSGSIPISLSNASKLEHIEIANNNFSG 285 (1008)
Q Consensus 226 --~L~ls~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 285 (1008)
.|++++|.++ .++...+. ..+|+.|+|++|.+++..+..+..+++|++|++++|++..
T Consensus 179 ~l~L~ls~n~l~-~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c 238 (276)
T 2z62_A 179 NLSLDLSLNPMN-FIQPGAFK-EIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 238 (276)
T ss_dssp CEEEECCSSCCC-EECTTSSC-SCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCC
T ss_pred ceeeecCCCccc-ccCccccC-CCcccEEECCCCceeecCHhHhcccccccEEEccCCcccc
Confidence 7788888887 44444443 2367777777777775555556667777777777776653
No 326
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.92 E-value=3e-24 Score=231.57 Aligned_cols=228 Identities=20% Similarity=0.210 Sum_probs=180.8
Q ss_pred EEEecCCcCCccCChhhhhhcccceeeeeccccccCCCCCccccccccceEEecCccccCCcchhccCCCCCceEEccCC
Q 045798 329 VLSLGGNQFRGALPHSIANLSSQLQILILSSNQFYGSIPLGIGNLVDLYLLGMVENQFTGAIPKEMGKLQKLQGLDFSGN 408 (1008)
Q Consensus 329 ~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N 408 (1008)
..+..+..+. .+|..+. ..|++|++++|.+++..+..+.++++|++|++++|++++..+..|..+++|++|+|++|
T Consensus 11 ~~~c~~~~l~-~ip~~l~---~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n 86 (276)
T 2z62_A 11 TYQCMELNFY-KIPDNLP---FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGN 86 (276)
T ss_dssp EEECTTSCCS-SCCSSSC---TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTC
T ss_pred eEEecCCCcc-ccCCCCC---CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCC
Confidence 4566677776 5666543 35888888888888666667888888888888888888777778888888888888888
Q ss_pred cccccccccccCCCCcceeeccccccccccCCCCcCCCcccEeecccccccCCcchhhhhhhhhhhhhcccCccccCCCc
Q 045798 409 HFSGEIPSSLGNLSSLYEVFFNNNNLSGVIPFSLGNLKRLAFLEMSGNELSGTIPEDIFNISYLSNSLNLARNHLVGIIP 488 (1008)
Q Consensus 409 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~~~~~~~~~~~~L~L~~N~l~~~~p 488 (1008)
++++..+..|.++++|++|++++|.+.+..+..+..+++|++|++++|++++ ..+|
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~------------------------~~l~ 142 (276)
T 2z62_A 87 PIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQS------------------------FKLP 142 (276)
T ss_dssp CCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCC------------------------CCCC
T ss_pred ccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccce------------------------ecCc
Confidence 8887777788888888888888888887777678888888888888888763 0257
Q ss_pred ccccccccccccccccccccCCCCcccccccccc----eeeccCcccccchhhhhhccccccEEecCCCcccccccCc-c
Q 045798 489 PRIGNLRALRSFDVSNNDLSGEIPIELGHCSSLE----EIYLAGNLFHGSIPSFFNALKGVQKIDLSRNNLSGQIPIF-L 563 (1008)
Q Consensus 489 ~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~----~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~-~ 563 (1008)
..++.+++|+.|+|++|.+++..+..+..+++|+ +|++++|++++..+..+. ..+|+.|+|++|++++..+.. .
T Consensus 143 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~ 221 (276)
T 2z62_A 143 EYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFK-EIRLKELALDTNQLKSVPDGIFD 221 (276)
T ss_dssp GGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSC-SCCEEEEECCSSCCSCCCTTTTT
T ss_pred hhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCcccccCccccC-CCcccEEECCCCceeecCHhHhc
Confidence 7788889999999999999877777888888887 889999999865555554 447999999999998776655 5
Q ss_pred cccccceeecccCcccccCCCC
Q 045798 564 EALSLEYLNLSFNDFEGKIPAK 585 (1008)
Q Consensus 564 ~~~~L~~L~l~~N~l~g~~p~~ 585 (1008)
.+.+|+.|++++|++++..|..
T Consensus 222 ~l~~L~~L~l~~N~~~c~c~~l 243 (276)
T 2z62_A 222 RLTSLQKIWLHTNPWDCSCPRI 243 (276)
T ss_dssp TCCSCCEEECCSSCBCCCTTTT
T ss_pred ccccccEEEccCCcccccCCch
Confidence 6778999999999999887754
No 327
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.91 E-value=9.4e-25 Score=234.56 Aligned_cols=200 Identities=21% Similarity=0.304 Sum_probs=153.6
Q ss_pred cceeeeeccccccCCCCCccccccccceEEecCccccCCcchhccCCCCCceEEccCCcccccccccccCCCCcceeecc
Q 045798 351 QLQILILSSNQFYGSIPLGIGNLVDLYLLGMVENQFTGAIPKEMGKLQKLQGLDFSGNHFSGEIPSSLGNLSSLYEVFFN 430 (1008)
Q Consensus 351 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 430 (1008)
+|+.|++++|.++ .+ ..+..+++|++|++++|++++. ..+..+++|++|+|++|.+++..+..|.++++|++|+++
T Consensus 42 ~L~~L~l~~~~i~-~~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 117 (272)
T 3rfs_A 42 SIDQIIANNSDIK-SV-QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLV 117 (272)
T ss_dssp TCCEEECTTSCCC-CC-TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred ceeeeeeCCCCcc-cc-cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECC
Confidence 3666666666655 22 2356666777777777776642 356777777777777777776666667777777777777
Q ss_pred ccccccccCCCCcCCCcccEeecccccccCCcchhhhhhhhhhhhhcccCccccCCCcccccccccccccccccccccCC
Q 045798 431 NNNLSGVIPFSLGNLKRLAFLEMSGNELSGTIPEDIFNISYLSNSLNLARNHLVGIIPPRIGNLRALRSFDVSNNDLSGE 510 (1008)
Q Consensus 431 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~~~~~~~~~~~~L~L~~N~l~~~~p~~~~~l~~L~~Ldls~N~l~~~ 510 (1008)
+|.+++..+..|+.+++|++|+|++|++++ ..+..++.+++|+.|++++|.+++.
T Consensus 118 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-------------------------~~~~~~~~l~~L~~L~l~~n~l~~~ 172 (272)
T 3rfs_A 118 ENQLQSLPDGVFDKLTNLTYLNLAHNQLQS-------------------------LPKGVFDKLTNLTELDLSYNQLQSL 172 (272)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECCSSCCCC-------------------------CCTTTTTTCTTCCEEECCSSCCCCC
T ss_pred CCcCCccCHHHhccCCCCCEEECCCCccCc-------------------------cCHHHhccCccCCEEECCCCCcCcc
Confidence 777776666667777777777777777763 4445567788899999999999877
Q ss_pred CCcccccccccceeeccCcccccchhhhhhccccccEEecCCCcccccccCcccccccceeecccCcccccCCCC
Q 045798 511 IPIELGHCSSLEEIYLAGNLFHGSIPSFFNALKGVQKIDLSRNNLSGQIPIFLEALSLEYLNLSFNDFEGKIPAK 585 (1008)
Q Consensus 511 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~L~~L~l~~N~l~g~~p~~ 585 (1008)
.|..++.+++|++|+|++|++++.+|..|..+++|+.|+|++|++.+..| .|+.|+++.|.++|.+|..
T Consensus 173 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~------~l~~l~~~~n~~~g~ip~~ 241 (272)
T 3rfs_A 173 PEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP------GIRYLSEWINKHSGVVRNS 241 (272)
T ss_dssp CTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT------TTHHHHHHHHHTGGGBBCT
T ss_pred CHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccccCc------HHHHHHHHHHhCCCcccCc
Confidence 77778889999999999999998888888999999999999999887655 5888999999999999975
No 328
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.91 E-value=5.8e-24 Score=225.54 Aligned_cols=192 Identities=22% Similarity=0.220 Sum_probs=163.2
Q ss_pred CCCcccceEEcCCCCeEEEEeccccCCCCccCcCccCCccCCeeeecCCCCCCCCCccccCCCCCCEEEccCCCCCCccC
Q 045798 40 HFCEWEGITCGRRHRRVTALDLMSKSLSGSLSPHLGNLSFLREINLSNNTIQGEIPPEFGRLFRLEALFLSNNSLVGKIP 119 (1008)
Q Consensus 40 ~~c~w~gv~c~~~~~~v~~l~l~~~~l~~~l~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p 119 (1008)
+||.|.|++|... .+.+|+++++++ .+|..+. +.|++|+|++|++++..+..|.++++|++|+|++|++++..|
T Consensus 3 ~Cp~~~gC~C~~~---~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 76 (251)
T 3m19_A 3 TCETVTGCTCNEG---KKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSA 76 (251)
T ss_dssp -CHHHHSSEEEGG---GTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCT
T ss_pred cCCCCCceEcCCC---CeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCH
Confidence 6889999999643 346788888888 6777665 589999999999998888889999999999999999998888
Q ss_pred cccccCcCcceEeeeccccccCCCccccccCCCCeeecccccCCCCCCCCCccccccchhhcccccCCCCCCccccCCCC
Q 045798 120 ANLSYCSRLTVLCIEYNKLQGRIPLEFVSLSKLKDLSLAKNKLTGGIPPFLGNLTSLEVLSLAGNSFGRNIPDSLGQLKQ 199 (1008)
Q Consensus 120 ~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 199 (1008)
..|..+++|++|+|++|++++..+..|..+++|++|+|++|+|++..+..|.++++|++|+|++|++++..+..|..+++
T Consensus 77 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 156 (251)
T 3m19_A 77 GVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTN 156 (251)
T ss_dssp TTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTT
T ss_pred hHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcC
Confidence 88999999999999999999777788888999999999999998766667888889999999999988777778888888
Q ss_pred CcEEEecCCcccccCCccccCCCCcceecccccccccc
Q 045798 200 LKILAIGGNNLSGPIPPSIYNLSFLVVFSVSHNQIHGS 237 (1008)
Q Consensus 200 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~ 237 (1008)
|++|+|++|++++..+..|..+++|+.|++++|.+...
T Consensus 157 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 157 LQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 99999999988877777888888888888888887643
No 329
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.91 E-value=2.2e-23 Score=223.67 Aligned_cols=202 Identities=22% Similarity=0.247 Sum_probs=150.4
Q ss_pred cCCeeeecCCCCCCCCCccccCCCCCCEEEccCCCCCCccCcccccCcCcceEeeeccccccCCCccccccCCCCeeecc
Q 045798 79 FLREINLSNNTIQGEIPPEFGRLFRLEALFLSNNSLVGKIPANLSYCSRLTVLCIEYNKLQGRIPLEFVSLSKLKDLSLA 158 (1008)
Q Consensus 79 ~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~ 158 (1008)
.++++++++++++ .+|..+. ++|++|+|++|++++..+..|+.+++|++|+|++|+++...+..|.++++|++|+|+
T Consensus 17 ~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~ 93 (270)
T 2o6q_A 17 NKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVT 93 (270)
T ss_dssp TTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECC
T ss_pred CCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECC
Confidence 4678888888888 5676554 678888888888887667788888888888888888886666667788888888888
Q ss_pred cccCCCCCCCCCccccccchhhcccccCCCCCCccccCCCCCcEEEecCCcccccCCccccCCCCcceeccccccccccC
Q 045798 159 KNKLTGGIPPFLGNLTSLEVLSLAGNSFGRNIPDSLGQLKQLKILAIGGNNLSGPIPPSIYNLSFLVVFSVSHNQIHGSL 238 (1008)
Q Consensus 159 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~l 238 (1008)
+|++++..+..|.++++|++|++++|++++..+..|..+++|++|+|++|.+++..+..|..+++|+.|++++|+++ .+
T Consensus 94 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~ 172 (270)
T 2o6q_A 94 DNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLK-RV 172 (270)
T ss_dssp SSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS-CC
T ss_pred CCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCc-Ee
Confidence 88888666667788888888888888887777777888888888888888887666666777777777777777776 45
Q ss_pred ChhhhhcCCCCcEEEeccccCCCCCCcccccCCCCceeeccccccc
Q 045798 239 PPSLGLLLPNLKFFQIHHNFFSGSIPISLSNASKLEHIEIANNNFS 284 (1008)
Q Consensus 239 p~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 284 (1008)
+...+..+++|++|+|++|.+++..+..+..+++|+.|++++|.+.
T Consensus 173 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 218 (270)
T 2o6q_A 173 PEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWD 218 (270)
T ss_dssp CTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred ChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCee
Confidence 5554445666666666666666544445555666666666666554
No 330
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.91 E-value=1.2e-23 Score=227.69 Aligned_cols=203 Identities=25% Similarity=0.269 Sum_probs=151.2
Q ss_pred ccCCccCCeeeecCCCCCCCCCccccCCCCCCEEEccCCCCCCccCcccccCcCcceEeeeccccccCCCccccccCCCC
Q 045798 74 LGNLSFLREINLSNNTIQGEIPPEFGRLFRLEALFLSNNSLVGKIPANLSYCSRLTVLCIEYNKLQGRIPLEFVSLSKLK 153 (1008)
Q Consensus 74 l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~ 153 (1008)
+..+++|+++++++|+++ .+|..+. +++++|+|++|.+++..|..|..+++|++|+|++|.|++..+. ..+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCC
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCC
Confidence 556677777888877777 5565553 5777888888888776677777788888888888887754332 6677788
Q ss_pred eeecccccCCCCCCCCCccccccchhhcccccCCCCCCccccCCCCCcEEEecCCcccccCCccccCCCCcceecccccc
Q 045798 154 DLSLAKNKLTGGIPPFLGNLTSLEVLSLAGNSFGRNIPDSLGQLKQLKILAIGGNNLSGPIPPSIYNLSFLVVFSVSHNQ 233 (1008)
Q Consensus 154 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ls~N~ 233 (1008)
+|+|++|+++ .+|..+..+++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|+.|+|++|+
T Consensus 81 ~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 159 (290)
T 1p9a_G 81 TLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNN 159 (290)
T ss_dssp EEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred EEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCc
Confidence 8888888877 667777777888888888888877667778888888888888888877666677777778888888887
Q ss_pred ccccCChhhhhcCCCCcEEEeccccCCCCCCcccccCCCCceeeccccccc
Q 045798 234 IHGSLPPSLGLLLPNLKFFQIHHNFFSGSIPISLSNASKLEHIEIANNNFS 284 (1008)
Q Consensus 234 l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 284 (1008)
++ .+|..++..+++|++|+|++|+++ .+|..+..+.+|+.|++++|.+.
T Consensus 160 l~-~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 160 LT-ELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp CS-CCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred CC-ccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCcc
Confidence 77 677766666777777777777777 56666666777777777777765
No 331
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.90 E-value=7.5e-25 Score=257.07 Aligned_cols=192 Identities=18% Similarity=0.146 Sum_probs=142.6
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccc--------hhhHHHHHHHHHHhhcCCCCceeeeecccccc
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCE--------GASKSFMAECKALKNIRHRNLVKVITSCSSID 754 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 754 (1008)
...+...+.||+|+||.||+|.. .++.+|+|+...... ...+++.+|++++++++||||+++..++.
T Consensus 335 ~~~~~~~~~LG~G~fg~Vy~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~--- 409 (540)
T 3en9_A 335 KKRKIPEHLIGKGAEADIKRDSY--LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDV--- 409 (540)
T ss_dssp -------------CCEEEEEEEC--SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEE---
T ss_pred cccCCCCCEEeeCCCEEEEEEEE--CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEE---
Confidence 33345567999999999999955 678899998643211 12346899999999999999995444432
Q ss_pred ccCCceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecC
Q 045798 755 FQGNDFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDN 834 (1008)
Q Consensus 755 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~ 834 (1008)
..+..|+||||+++++|.+++.. +..++.|+++||+|||++ +|+||||||+|||++.
T Consensus 410 --~~~~~~lVmE~~~ggsL~~~l~~------------------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~ 466 (540)
T 3en9_A 410 --DLDNKRIMMSYINGKLAKDVIED------------------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK 466 (540)
T ss_dssp --ETTTTEEEEECCCSEEHHHHSTT------------------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS
T ss_pred --eCCccEEEEECCCCCCHHHHHHH------------------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC
Confidence 23446999999999999999863 457999999999999998 9999999999999998
Q ss_pred CCCeEEcccCcccccccccCcccc---ccccccccccccCccccCC--CCCCcccchhhHHHHHHHHHhCCCCCC
Q 045798 835 DLSGHIGDFGLARFHQEVSNSTLS---SSVGVKGTIGYTAPEYGLG--SEVSTNGDVYSYGILLLEMVTAKKPTD 904 (1008)
Q Consensus 835 ~~~~kL~Dfg~a~~~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwslG~vl~elltG~~pf~ 904 (1008)
.+||+|||+|+........... ......||+.|+|||++.. ..|+..+|+|+..+-..+-+.++.+|.
T Consensus 467 --~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 467 --DLYIIDFGLGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp --SEEECCCTTCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred --eEEEEECccCEECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 9999999999977543221100 1124569999999999876 567888999999999999888887763
No 332
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.90 E-value=9.1e-24 Score=231.72 Aligned_cols=229 Identities=18% Similarity=0.176 Sum_probs=165.1
Q ss_pred CCCcEEEecCCcCCccCChh---hhhhcccceeeeeccccccCCCCCcc--ccccccceEEecCccccCCcc----hhcc
Q 045798 325 SKLRVLSLGGNQFRGALPHS---IANLSSQLQILILSSNQFYGSIPLGI--GNLVDLYLLGMVENQFTGAIP----KEMG 395 (1008)
Q Consensus 325 ~~L~~L~Ls~N~l~~~~p~~---~~~l~~~L~~L~Ls~N~l~~~~p~~~--~~l~~L~~L~L~~n~l~~~~~----~~~~ 395 (1008)
..++.+.+.++.+....-.. +... ++|++|++++|.+++..|..+ ..+++|+.|+|++|++++..+ ..+.
T Consensus 64 ~~l~~l~l~~~~~~~~~~~~~~~~~~~-~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~ 142 (310)
T 4glp_A 64 LRVRRLTVGAAQVPAQLLVGALRVLAY-SRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQW 142 (310)
T ss_dssp CCCCEEEECSCCCBHHHHHHHHHHHHH-SCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTT
T ss_pred cceeEEEEeCCcCCHHHHHHHHHhccc-CceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhh
Confidence 35677788877765221111 1122 259999999999999999888 899999999999999997655 4556
Q ss_pred CCCCCceEEccCCcccccccccccCCCCcceeeccccccccc--c--CCCCcCCCcccEeecccccccCCcchhhhhhhh
Q 045798 396 KLQKLQGLDFSGNHFSGEIPSSLGNLSSLYEVFFNNNNLSGV--I--PFSLGNLKRLAFLEMSGNELSGTIPEDIFNISY 471 (1008)
Q Consensus 396 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~--~--p~~~~~l~~L~~L~Ls~N~l~~~lp~~~~~~~~ 471 (1008)
.+++|++|+|++|++.+..|..|..+++|++|+|++|++.+. + +..+..+++|++|+|++|+++ .+|....
T Consensus 143 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~---- 217 (310)
T 4glp_A 143 LKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCA---- 217 (310)
T ss_dssp BCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHH----
T ss_pred hccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHH----
Confidence 789999999999999988888999999999999999998752 2 333578899999999999997 3333211
Q ss_pred hhhhhcccCccccCCCcccccccccccccccccccccCCCCcccccc---cccceeeccCcccccchhhhhhccccccEE
Q 045798 472 LSNSLNLARNHLVGIIPPRIGNLRALRSFDVSNNDLSGEIPIELGHC---SSLEEIYLAGNLFHGSIPSFFNALKGVQKI 548 (1008)
Q Consensus 472 ~~~~L~L~~N~l~~~~p~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l---~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 548 (1008)
..++.+++|++|||++|.+++..|..+..+ ++|++|+|++|+|+ .+|..+. ++|+.|
T Consensus 218 -----------------~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L 277 (310)
T 4glp_A 218 -----------------ALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVL 277 (310)
T ss_dssp -----------------HHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCE
T ss_pred -----------------HHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEE
Confidence 013455667777777777776666666665 47777777777777 5565553 677777
Q ss_pred ecCCCcccccccCcccccccceeecccCcccc
Q 045798 549 DLSRNNLSGQIPIFLEALSLEYLNLSFNDFEG 580 (1008)
Q Consensus 549 ~ls~N~l~~~~p~~~~~~~L~~L~l~~N~l~g 580 (1008)
||++|++++. |....+..|+.|+|++|+|+.
T Consensus 278 ~Ls~N~l~~~-~~~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 278 DLSSNRLNRA-PQPDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp ECCSCCCCSC-CCTTSCCCCSCEECSSTTTSC
T ss_pred ECCCCcCCCC-chhhhCCCccEEECcCCCCCC
Confidence 7777777753 334455667777777777654
No 333
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.90 E-value=1.5e-23 Score=226.90 Aligned_cols=204 Identities=23% Similarity=0.214 Sum_probs=149.4
Q ss_pred ccccCCCcEEEecCCcCCccCChhhhhhcccceeeeeccccccCCCCCccccccccceEEecCccccCCcchhccCCCCC
Q 045798 321 LTNCSKLRVLSLGGNQFRGALPHSIANLSSQLQILILSSNQFYGSIPLGIGNLVDLYLLGMVENQFTGAIPKEMGKLQKL 400 (1008)
Q Consensus 321 l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 400 (1008)
+.++++++.+++++|.++ .+|..+. ..++.|+|++|.+++..|..|..+++|+.|+|++|.|++..+. ..+++|
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~---~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L 79 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP---KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVL 79 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC---TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTC
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC---CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcC
Confidence 456777888888888887 5665543 3588888888888877777788888888888888888754332 677888
Q ss_pred ceEEccCCcccccccccccCCCCcceeeccccccccccCCCCcCCCcccEeecccccccCCcchhhhhhhhhhhhhcccC
Q 045798 401 QGLDFSGNHFSGEIPSSLGNLSSLYEVFFNNNNLSGVIPFSLGNLKRLAFLEMSGNELSGTIPEDIFNISYLSNSLNLAR 480 (1008)
Q Consensus 401 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~~~~~~~~~~~~L~L~~ 480 (1008)
++|+|++|+++ .+|..+..+++|+.|++++|+|++..|..|.++++|+.|+|++|++++
T Consensus 80 ~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~-------------------- 138 (290)
T 1p9a_G 80 GTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKT-------------------- 138 (290)
T ss_dssp CEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCC--------------------
T ss_pred CEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCc--------------------
Confidence 88888888887 667777788888888888888887777778888888888888887762
Q ss_pred ccccCCCcccccccccccccccccccccCCCCcccccccccceeeccCcccccchhhhhhccccccEEecCCCcccc
Q 045798 481 NHLVGIIPPRIGNLRALRSFDVSNNDLSGEIPIELGHCSSLEEIYLAGNLFHGSIPSFFNALKGVQKIDLSRNNLSG 557 (1008)
Q Consensus 481 N~l~~~~p~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~ 557 (1008)
..+..|..+++|+.|+|++|++++..+..+..+++|+.|+|++|+|+ .+|..+..+.+|+.|+|++|++..
T Consensus 139 -----~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C 209 (290)
T 1p9a_G 139 -----LPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLC 209 (290)
T ss_dssp -----CCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCC
T ss_pred -----cChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccC
Confidence 23344556677777777777777444445566777777777777777 566666667777777777777664
No 334
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.90 E-value=2e-23 Score=224.24 Aligned_cols=211 Identities=24% Similarity=0.256 Sum_probs=158.7
Q ss_pred ccCCccCCeeeecCCCCCCCCCccccCCCCCCEEEccCCCCCCccCcccccCcCcceEeeeccccccCCCccccccCCCC
Q 045798 74 LGNLSFLREINLSNNTIQGEIPPEFGRLFRLEALFLSNNSLVGKIPANLSYCSRLTVLCIEYNKLQGRIPLEFVSLSKLK 153 (1008)
Q Consensus 74 l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~ 153 (1008)
+..+++|+.|++++|.++ .++ .+..+++|++|+|++|.+++ + ..++.+++|++|+|++|.+++..+..|.++++|+
T Consensus 37 ~~~l~~L~~L~l~~~~i~-~~~-~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 112 (272)
T 3rfs_A 37 QNELNSIDQIIANNSDIK-SVQ-GIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLK 112 (272)
T ss_dssp HHHHTTCCEEECTTSCCC-CCT-TGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCC
T ss_pred cccccceeeeeeCCCCcc-ccc-ccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECCCCccCccChhHhcCCcCCC
Confidence 456677788888887776 333 47778888888888888774 2 3677788888888888888876666777788888
Q ss_pred eeecccccCCCCCCCCCccccccchhhcccccCCCCCCccccCCCCCcEEEecCCcccccCCccccCCCCcceecccccc
Q 045798 154 DLSLAKNKLTGGIPPFLGNLTSLEVLSLAGNSFGRNIPDSLGQLKQLKILAIGGNNLSGPIPPSIYNLSFLVVFSVSHNQ 233 (1008)
Q Consensus 154 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ls~N~ 233 (1008)
+|+|++|++++..+..|+++++|++|++++|++++..+..|..+++|+.|++++|++++..+..+..+++|+.|++++|+
T Consensus 113 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~ 192 (272)
T 3rfs_A 113 ELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQ 192 (272)
T ss_dssp EEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCc
Confidence 88888888886666667778888888888888877777777788888888888888887767777788888888888888
Q ss_pred ccccCChhhhhcCCCCcEEEeccccCCCCCCcccccCCCCceeecccccccccccccccCCCc
Q 045798 234 IHGSLPPSLGLLLPNLKFFQIHHNFFSGSIPISLSNASKLEHIEIANNNFSGKLSVNFGGMKN 296 (1008)
Q Consensus 234 l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 296 (1008)
++ .++...+..+++|++|+|++|.+.+ .+++|+.|++..|.+++..|..++.+..
T Consensus 193 l~-~~~~~~~~~l~~L~~L~l~~N~~~~-------~~~~l~~l~~~~n~~~g~ip~~~~~~~~ 247 (272)
T 3rfs_A 193 LK-SVPDGVFDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGSVAP 247 (272)
T ss_dssp CS-CCCTTTTTTCTTCCEEECCSSCBCC-------CTTTTHHHHHHHHHTGGGBBCTTSCBCG
T ss_pred CC-ccCHHHHhCCcCCCEEEccCCCccc-------cCcHHHHHHHHHHhCCCcccCcccccCC
Confidence 87 4555555567888888888887763 3556888888888888888877765544
No 335
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.90 E-value=2.5e-23 Score=218.93 Aligned_cols=203 Identities=14% Similarity=0.150 Sum_probs=150.2
Q ss_pred ccCcCccCCccCCeeeecCCCCCCCCCccccCCCCCCEEEccCCC-CCCccCcccccCcCcceEeeec-cccccCCCccc
Q 045798 69 SLSPHLGNLSFLREINLSNNTIQGEIPPEFGRLFRLEALFLSNNS-LVGKIPANLSYCSRLTVLCIEY-NKLQGRIPLEF 146 (1008)
Q Consensus 69 ~l~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~-l~~~~p~~l~~l~~L~~L~Ls~-n~l~~~~p~~~ 146 (1008)
.+|. +. .+|++|+|++|++++..+..|.++++|++|++++|. +++..+..|+.+++|++|++++ |++++..+..|
T Consensus 25 ~ip~-~~--~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f 101 (239)
T 2xwt_C 25 RIPS-LP--PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDAL 101 (239)
T ss_dssp SCCC-CC--TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSE
T ss_pred ccCC-CC--CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHh
Confidence 4665 43 389999999999997777789999999999999997 8866667899999999999998 99997777888
Q ss_pred cccCCCCeeecccccCCCCCCCCCccccccc---hhhcccc-cCCCCCCccccCCCCCc-EEEecCCcccccCCccccCC
Q 045798 147 VSLSKLKDLSLAKNKLTGGIPPFLGNLTSLE---VLSLAGN-SFGRNIPDSLGQLKQLK-ILAIGGNNLSGPIPPSIYNL 221 (1008)
Q Consensus 147 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~---~L~L~~n-~l~~~~~~~~~~l~~L~-~L~L~~n~l~~~~~~~~~~l 221 (1008)
.++++|++|++++|++++ +|. |..+++|+ +|++++| ++++..+..|..+++|+ .|++++|+++.+.+..|..
T Consensus 102 ~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~- 178 (239)
T 2xwt_C 102 KELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG- 178 (239)
T ss_dssp ECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT-
T ss_pred CCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCC-
Confidence 889999999999999885 665 77777777 8888888 77766666777777777 7777777777444444444
Q ss_pred CCcceecccccc-ccccCChhhhhcC-CCCcEEEeccccCCCCCCcccccCCCCceeecccc
Q 045798 222 SFLVVFSVSHNQ-IHGSLPPSLGLLL-PNLKFFQIHHNFFSGSIPISLSNASKLEHIEIANN 281 (1008)
Q Consensus 222 ~~L~~L~ls~N~-l~~~lp~~~~~~l-~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N 281 (1008)
++|+.|++++|+ ++ .+|...+..+ ++|+.|+|++|.+++ +|.. .+++|+.|+++++
T Consensus 179 ~~L~~L~L~~n~~l~-~i~~~~~~~l~~~L~~L~l~~N~l~~-l~~~--~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 179 TKLDAVYLNKNKYLT-VIDKDAFGGVYSGPSLLDVSQTSVTA-LPSK--GLEHLKELIARNT 236 (239)
T ss_dssp CEEEEEECTTCTTCC-EECTTTTTTCSBCCSEEECTTCCCCC-CCCT--TCTTCSEEECTTC
T ss_pred CCCCEEEcCCCCCcc-cCCHHHhhccccCCcEEECCCCcccc-CChh--HhccCceeeccCc
Confidence 677777777774 65 5555555555 666666666666663 3322 4455555555544
No 336
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.89 E-value=1.4e-24 Score=243.74 Aligned_cols=122 Identities=14% Similarity=0.161 Sum_probs=60.2
Q ss_pred ccceEEecCccccCCcchhcc----CC-CCCceEEccCCccccc----ccccccC-CCCcceeeccccccccccC----C
Q 045798 375 DLYLLGMVENQFTGAIPKEMG----KL-QKLQGLDFSGNHFSGE----IPSSLGN-LSSLYEVFFNNNNLSGVIP----F 440 (1008)
Q Consensus 375 ~L~~L~L~~n~l~~~~~~~~~----~l-~~L~~L~Ls~N~l~~~----~p~~~~~-l~~L~~L~l~~N~l~~~~p----~ 440 (1008)
+|+.|+|++|++++..+..+. .+ ++|+.|||++|.|++. ++..+.. .++|++|+|++|.+++..+ .
T Consensus 168 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~ 247 (362)
T 3goz_A 168 NVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLENLKL 247 (362)
T ss_dssp TCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCHHHHHH
T ss_pred cccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHHHHHHH
Confidence 444555555554444433222 22 3555555555555531 3333333 2355555555555554322 3
Q ss_pred CCcCCCcccEeecccccccCCcchhhhhhhhhhhhhcccCccccCCCcccccccccccccccccccccCCCCcc
Q 045798 441 SLGNLKRLAFLEMSGNELSGTIPEDIFNISYLSNSLNLARNHLVGIIPPRIGNLRALRSFDVSNNDLSGEIPIE 514 (1008)
Q Consensus 441 ~~~~l~~L~~L~Ls~N~l~~~lp~~~~~~~~~~~~L~L~~N~l~~~~p~~~~~l~~L~~Ldls~N~l~~~~p~~ 514 (1008)
.+..+++|+.|+|++|.+.+..+..+. .++..+..+++|+.||+++|.+.+..|..
T Consensus 248 ~~~~l~~L~~L~L~~n~l~~i~~~~~~------------------~l~~~~~~l~~L~~LdL~~N~l~~~~~~~ 303 (362)
T 3goz_A 248 LKDSLKHLQTVYLDYDIVKNMSKEQCK------------------ALGAAFPNIQKIILVDKNGKEIHPSHSIP 303 (362)
T ss_dssp TTTTTTTCSEEEEEHHHHTTCCHHHHH------------------HHHTTSTTCCEEEEECTTSCBCCGGGCHH
T ss_pred HHhcCCCccEEEeccCCccccCHHHHH------------------HHHHHhccCCceEEEecCCCcCCCcchHH
Confidence 345566677777777765521111111 22334555666777777777766544433
No 337
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.89 E-value=4.8e-23 Score=218.43 Aligned_cols=179 Identities=20% Similarity=0.228 Sum_probs=118.4
Q ss_pred ceeeeeccccccCCCCCccccccccceEEecCccccCCcchhccCCCCCceEEccCCcccccccccccCCCCcceeeccc
Q 045798 352 LQILILSSNQFYGSIPLGIGNLVDLYLLGMVENQFTGAIPKEMGKLQKLQGLDFSGNHFSGEIPSSLGNLSSLYEVFFNN 431 (1008)
Q Consensus 352 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~ 431 (1008)
.+.++++++.++ .+|..+. ++++.|+|++|++.+..+..|..+++|++|+|++|++++..+..|..+++|++|+|++
T Consensus 16 ~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 92 (251)
T 3m19_A 16 KKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLAN 92 (251)
T ss_dssp GTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTT
T ss_pred CeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCC
Confidence 455566666655 4554443 4566666666666666666666666777777777777666666666666777777777
Q ss_pred cccccccCCCCcCCCcccEeecccccccCCcchhhhhhhhhhhhhcccCccccCCCcccccccccccccccccccccCCC
Q 045798 432 NNLSGVIPFSLGNLKRLAFLEMSGNELSGTIPEDIFNISYLSNSLNLARNHLVGIIPPRIGNLRALRSFDVSNNDLSGEI 511 (1008)
Q Consensus 432 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~~~~~~~~~~~~L~L~~N~l~~~~p~~~~~l~~L~~Ldls~N~l~~~~ 511 (1008)
|.+++..+..|..+++|++|+|++|++++ ..+..|..+++|+.|+|++|.+++..
T Consensus 93 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~-------------------------~~~~~~~~l~~L~~L~Ls~N~l~~~~ 147 (251)
T 3m19_A 93 NQLASLPLGVFDHLTQLDKLYLGGNQLKS-------------------------LPSGVFDRLTKLKELRLNTNQLQSIP 147 (251)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCC-------------------------CCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred CcccccChhHhcccCCCCEEEcCCCcCCC-------------------------cChhHhccCCcccEEECcCCcCCccC
Confidence 77766666666777777777777777662 22334556667777777777777555
Q ss_pred CcccccccccceeeccCcccccchhhhhhccccccEEecCCCccccc
Q 045798 512 PIELGHCSSLEEIYLAGNLFHGSIPSFFNALKGVQKIDLSRNNLSGQ 558 (1008)
Q Consensus 512 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~ 558 (1008)
|..|+.+++|++|+|++|+|++..|..|..+++|+.|+|++|++++.
T Consensus 148 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 148 AGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred HHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 55677777777777777777766666777777777777777777765
No 338
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.88 E-value=1.1e-22 Score=213.92 Aligned_cols=214 Identities=20% Similarity=0.185 Sum_probs=183.4
Q ss_pred CCCCCcc-cce--EEcC------CCCeEEEEeccccCCCCccCcCccCCccCCeeeecCCC-CCCCCCccccCCCCCCEE
Q 045798 38 SRHFCEW-EGI--TCGR------RHRRVTALDLMSKSLSGSLSPHLGNLSFLREINLSNNT-IQGEIPPEFGRLFRLEAL 107 (1008)
Q Consensus 38 ~~~~c~w-~gv--~c~~------~~~~v~~l~l~~~~l~~~l~~~l~~l~~L~~L~L~~n~-~~~~~p~~~~~l~~L~~L 107 (1008)
..+.|.+ .++ .|.. -...++.|+|++|.+++..+..+..+++|++|+|++|+ ++...+..|.++++|++|
T Consensus 6 ~~C~C~~~~~~~v~c~~l~~ip~~~~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L 85 (239)
T 2xwt_C 6 PPCECHQEEDFRVTCKDIQRIPSLPPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHI 85 (239)
T ss_dssp SSCSEEECSTTEEEECSCSSCCCCCTTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEE
T ss_pred CCCeeCCCCcceeEccCccccCCCCCcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEE
Confidence 3455654 554 4853 23468999999999996666689999999999999997 887777799999999999
Q ss_pred EccC-CCCCCccCcccccCcCcceEeeeccccccCCCccccccCCCC---eeecccc-cCCCCCCCCCccccccc-hhhc
Q 045798 108 FLSN-NSLVGKIPANLSYCSRLTVLCIEYNKLQGRIPLEFVSLSKLK---DLSLAKN-KLTGGIPPFLGNLTSLE-VLSL 181 (1008)
Q Consensus 108 ~Ls~-n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~---~L~L~~n-~l~~~~~~~~~~l~~L~-~L~L 181 (1008)
+|++ |++++..+..|.++++|++|++++|++++ +|. |..+++|+ +|++++| ++++..+..|.++++|+ +|++
T Consensus 86 ~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l 163 (239)
T 2xwt_C 86 EIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKL 163 (239)
T ss_dssp EEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEEC
T ss_pred ECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEc
Confidence 9999 99997777899999999999999999996 665 88888898 9999999 99977777899999999 9999
Q ss_pred ccccCCCCCCccccCCCCCcEEEecCCc-ccccCCccccCC-CCcceeccccccccccCChhhhhcCCCCcEEEecccc
Q 045798 182 AGNSFGRNIPDSLGQLKQLKILAIGGNN-LSGPIPPSIYNL-SFLVVFSVSHNQIHGSLPPSLGLLLPNLKFFQIHHNF 258 (1008)
Q Consensus 182 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~-l~~~~~~~~~~l-~~L~~L~ls~N~l~~~lp~~~~~~l~~L~~L~L~~N~ 258 (1008)
++|+++...+..|.. ++|+.|++++|+ +++..+..|.++ ++|+.|++++|+++ .+|.. .+++|+.|+++++.
T Consensus 164 ~~n~l~~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~-~l~~~---~~~~L~~L~l~~~~ 237 (239)
T 2xwt_C 164 YNNGFTSVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVT-ALPSK---GLEHLKELIARNTW 237 (239)
T ss_dssp CSCCCCEECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCC-CCCCT---TCTTCSEEECTTC-
T ss_pred CCCCCcccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccc-cCChh---HhccCceeeccCcc
Confidence 999998555555666 899999999995 998888899999 99999999999998 77766 37899999998864
No 339
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.88 E-value=1.4e-24 Score=246.39 Aligned_cols=142 Identities=15% Similarity=0.204 Sum_probs=73.9
Q ss_pred CCCceEEccCCccc-cccc---ccccCCCCcceeeccccccc--c---ccCCCCcCCCcccEeecccccccCCcchhhhh
Q 045798 398 QKLQGLDFSGNHFS-GEIP---SSLGNLSSLYEVFFNNNNLS--G---VIPFSLGNLKRLAFLEMSGNELSGTIPEDIFN 468 (1008)
Q Consensus 398 ~~L~~L~Ls~N~l~-~~~p---~~~~~l~~L~~L~l~~N~l~--~---~~p~~~~~l~~L~~L~Ls~N~l~~~lp~~~~~ 468 (1008)
++|++|+|++|+++ +.++ ..+..+++|+.|++++|.++ | ..|..+..+++|+.|+|++|.++.. .
T Consensus 159 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~---g--- 232 (386)
T 2ca6_A 159 PPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHL---G--- 232 (386)
T ss_dssp CCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHH---H---
T ss_pred CCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcH---H---
Confidence 55666666666554 2233 23444555555555555554 1 2333555555666666666655310 0
Q ss_pred hhhhhhhhcccCccccCCCcccccccccccccccccccccCC----CCccc--ccccccceeeccCccccc----chhhh
Q 045798 469 ISYLSNSLNLARNHLVGIIPPRIGNLRALRSFDVSNNDLSGE----IPIEL--GHCSSLEEIYLAGNLFHG----SIPSF 538 (1008)
Q Consensus 469 ~~~~~~~L~L~~N~l~~~~p~~~~~l~~L~~Ldls~N~l~~~----~p~~~--~~l~~L~~L~L~~N~l~~----~~p~~ 538 (1008)
.+.+|..+..+++|+.|+|++|.+++. +|..+ +.+++|++|+|++|.+++ .+|..
T Consensus 233 ---------------~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~ 297 (386)
T 2ca6_A 233 ---------------SSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTV 297 (386)
T ss_dssp ---------------HHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHH
T ss_pred ---------------HHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHH
Confidence 002344455555566666666665543 34444 225666666666666665 35555
Q ss_pred h-hccccccEEecCCCccccccc
Q 045798 539 F-NALKGVQKIDLSRNNLSGQIP 560 (1008)
Q Consensus 539 ~-~~l~~L~~L~ls~N~l~~~~p 560 (1008)
+ .++++|+.|+|++|++++..|
T Consensus 298 l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 298 IDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp HHHHCTTCCEEECTTSBSCTTSH
T ss_pred HHhcCCCceEEEccCCcCCcchh
Confidence 5 445666666666666665443
No 340
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.88 E-value=3e-24 Score=240.99 Aligned_cols=267 Identities=18% Similarity=0.172 Sum_probs=169.9
Q ss_pred EeccccCCCCccCcCccCCccCCeeeecCCCCCCCCC----ccccCCC-CCCEEEccCCCCCCccCcccccC-----cCc
Q 045798 59 LDLMSKSLSGSLSPHLGNLSFLREINLSNNTIQGEIP----PEFGRLF-RLEALFLSNNSLVGKIPANLSYC-----SRL 128 (1008)
Q Consensus 59 l~l~~~~l~~~l~~~l~~l~~L~~L~L~~n~~~~~~p----~~~~~l~-~L~~L~Ls~n~l~~~~p~~l~~l-----~~L 128 (1008)
.+|+.++++|.+|..+...++|++|+|++|.+++..+ ..|..++ +|++|+|++|.+++..+..+..+ ++|
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 4677777887777776666778888888888876555 6677777 78888888888887767776665 788
Q ss_pred ceEeeeccccccCCCcccccc-----CCCCeeecccccCCCCCCCCCc----c-ccccchhhcccccCCCCC----Cccc
Q 045798 129 TVLCIEYNKLQGRIPLEFVSL-----SKLKDLSLAKNKLTGGIPPFLG----N-LTSLEVLSLAGNSFGRNI----PDSL 194 (1008)
Q Consensus 129 ~~L~Ls~n~l~~~~p~~~~~l-----~~L~~L~L~~n~l~~~~~~~~~----~-l~~L~~L~L~~n~l~~~~----~~~~ 194 (1008)
++|+|++|++++..+..+... ++|++|+|++|++++..+..+. . .++|++|+|++|+++... +..+
T Consensus 83 ~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l 162 (362)
T 3goz_A 83 TSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQIL 162 (362)
T ss_dssp CEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHH
T ss_pred cEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHH
Confidence 888888888876666655443 6788888888887755444332 2 247777777777775433 3334
Q ss_pred cCCC-CCcEEEecCCcccccCCcccc----CC-CCcceecccccccccc----CChhhhhcCCCCcEEEeccccCCCCCC
Q 045798 195 GQLK-QLKILAIGGNNLSGPIPPSIY----NL-SFLVVFSVSHNQIHGS----LPPSLGLLLPNLKFFQIHHNFFSGSIP 264 (1008)
Q Consensus 195 ~~l~-~L~~L~L~~n~l~~~~~~~~~----~l-~~L~~L~ls~N~l~~~----lp~~~~~~l~~L~~L~L~~N~l~~~~p 264 (1008)
..++ +|++|+|++|++++..+..+. .+ ++|+.|+|++|.+.+. ++..+....++|++|+|++|.+.+..+
T Consensus 163 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~ 242 (362)
T 3goz_A 163 AAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSL 242 (362)
T ss_dssp HTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCH
T ss_pred hcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHH
Confidence 4454 777777777777655544333 33 4677777777776632 333333333466666666666654333
Q ss_pred ----cccccCCCCceeecccccccccccccccCCCcccccccccccCCCCCCCcccccccccccCCCcEEEecCCcCCcc
Q 045798 265 ----ISLSNASKLEHIEIANNNFSGKLSVNFGGMKNLSLLNLQFSNLGSGESDEMGFMNSLTNCSKLRVLSLGGNQFRGA 340 (1008)
Q Consensus 265 ----~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~ 340 (1008)
..+..+++|++|++++|.+.+..+..+ ..+...+..+++|+.|++++|++...
T Consensus 243 ~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~-----------------------~~l~~~~~~l~~L~~LdL~~N~l~~~ 299 (362)
T 3goz_A 243 ENLKLLKDSLKHLQTVYLDYDIVKNMSKEQC-----------------------KALGAAFPNIQKIILVDKNGKEIHPS 299 (362)
T ss_dssp HHHHHTTTTTTTCSEEEEEHHHHTTCCHHHH-----------------------HHHHTTSTTCCEEEEECTTSCBCCGG
T ss_pred HHHHHHHhcCCCccEEEeccCCccccCHHHH-----------------------HHHHHHhccCCceEEEecCCCcCCCc
Confidence 223444556666666665443322211 12233566778888999999998876
Q ss_pred CChhhhhh
Q 045798 341 LPHSIANL 348 (1008)
Q Consensus 341 ~p~~~~~l 348 (1008)
.+..+.+.
T Consensus 300 ~~~~~~~~ 307 (362)
T 3goz_A 300 HSIPISNL 307 (362)
T ss_dssp GCHHHHHH
T ss_pred chHHHHHH
Confidence 66655543
No 341
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.88 E-value=1.1e-22 Score=223.11 Aligned_cols=226 Identities=15% Similarity=0.145 Sum_probs=175.4
Q ss_pred ccCCeeeecCCCCCCCCCc---cccCCCCCCEEEccCCCCCCccCccc--ccCcCcceEeeeccccccCCC----ccccc
Q 045798 78 SFLREINLSNNTIQGEIPP---EFGRLFRLEALFLSNNSLVGKIPANL--SYCSRLTVLCIEYNKLQGRIP----LEFVS 148 (1008)
Q Consensus 78 ~~L~~L~L~~n~~~~~~p~---~~~~l~~L~~L~Ls~n~l~~~~p~~l--~~l~~L~~L~Ls~n~l~~~~p----~~~~~ 148 (1008)
..++.|.+.++.++...-. .+..+++|++|+|++|.+++..|..+ +.+++|++|+|++|.+++..+ ..+..
T Consensus 64 ~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~ 143 (310)
T 4glp_A 64 LRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWL 143 (310)
T ss_dssp CCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTB
T ss_pred cceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhh
Confidence 3467788888776521111 12345679999999999988888888 889999999999999987555 44557
Q ss_pred cCCCCeeecccccCCCCCCCCCccccccchhhcccccCCCC--C--CccccCCCCCcEEEecCCcccccCCc----cccC
Q 045798 149 LSKLKDLSLAKNKLTGGIPPFLGNLTSLEVLSLAGNSFGRN--I--PDSLGQLKQLKILAIGGNNLSGPIPP----SIYN 220 (1008)
Q Consensus 149 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~--~--~~~~~~l~~L~~L~L~~n~l~~~~~~----~~~~ 220 (1008)
+++|++|+|++|++++..+..|+++++|++|+|++|++.+. . +..+..+++|++|+|++|+++.. +. .+..
T Consensus 144 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l-~~~~~~l~~~ 222 (310)
T 4glp_A 144 KPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETP-TGVCAALAAA 222 (310)
T ss_dssp CSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCH-HHHHHHHHHH
T ss_pred ccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCch-HHHHHHHHhc
Confidence 88999999999999877788888999999999999987542 1 23347888999999999998732 22 3577
Q ss_pred CCCcceeccccccccccCChhhhhc--CCCCcEEEeccccCCCCCCcccccCCCCceeecccccccccccccccCCCccc
Q 045798 221 LSFLVVFSVSHNQIHGSLPPSLGLL--LPNLKFFQIHHNFFSGSIPISLSNASKLEHIEIANNNFSGKLSVNFGGMKNLS 298 (1008)
Q Consensus 221 l~~L~~L~ls~N~l~~~lp~~~~~~--l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 298 (1008)
+++|++|+|++|++++.+|..++.. +++|++|+|++|+++ .+|..+. ++|++|++++|++++... +..+++|+
T Consensus 223 l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~~~--~~~l~~L~ 297 (310)
T 4glp_A 223 GVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRAPQ--PDELPEVD 297 (310)
T ss_dssp TCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSCCC--TTSCCCCS
T ss_pred CCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCCch--hhhCCCcc
Confidence 8899999999999987667666553 379999999999998 6677664 789999999999987622 67889999
Q ss_pred ccccccccCCC
Q 045798 299 LLNLQFSNLGS 309 (1008)
Q Consensus 299 ~L~L~~n~l~~ 309 (1008)
.|+|++|+++.
T Consensus 298 ~L~L~~N~l~~ 308 (310)
T 4glp_A 298 NLTLDGNPFLV 308 (310)
T ss_dssp CEECSSTTTSC
T ss_pred EEECcCCCCCC
Confidence 99999998865
No 342
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.87 E-value=1.6e-22 Score=221.04 Aligned_cols=194 Identities=22% Similarity=0.387 Sum_probs=124.3
Q ss_pred cccCCCcEEEecCCcCCccCChhhhhhcccceeeeeccccccCCCCCccccccccceEEecCccccCCcchhccCCCCCc
Q 045798 322 TNCSKLRVLSLGGNQFRGALPHSIANLSSQLQILILSSNQFYGSIPLGIGNLVDLYLLGMVENQFTGAIPKEMGKLQKLQ 401 (1008)
Q Consensus 322 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 401 (1008)
..+++|+.|++++|.+. .+| .+..+. +|++|+|++|.+++..+ +..+++|++|++++|++++. ..+..+++|+
T Consensus 38 ~~l~~L~~L~l~~~~i~-~l~-~~~~l~-~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~ 110 (308)
T 1h6u_A 38 ADLDGITTLSAFGTGVT-TIE-GVQYLN-NLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV--SAIAGLQSIK 110 (308)
T ss_dssp HHHHTCCEEECTTSCCC-CCT-TGGGCT-TCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC--GGGTTCTTCC
T ss_pred HHcCCcCEEEeeCCCcc-Cch-hhhccC-CCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc--hhhcCCCCCC
Confidence 34556666666666665 333 344443 46666666666663332 66666666666666666643 2466666677
Q ss_pred eEEccCCcccccccccccCCCCcceeeccccccccccCCCCcCCCcccEeecccccccCCcchhhhhhhhhhhhhcccCc
Q 045798 402 GLDFSGNHFSGEIPSSLGNLSSLYEVFFNNNNLSGVIPFSLGNLKRLAFLEMSGNELSGTIPEDIFNISYLSNSLNLARN 481 (1008)
Q Consensus 402 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~~~~~~~~~~~~L~L~~N 481 (1008)
.|+|++|++++ ++. +..+++|++|++++|.+++..+ +..+++|+.|+|++|++++
T Consensus 111 ~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~--------------------- 165 (308)
T 1h6u_A 111 TLDLTSTQITD-VTP-LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSD--------------------- 165 (308)
T ss_dssp EEECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC---------------------
T ss_pred EEECCCCCCCC-chh-hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCC---------------------
Confidence 77777776664 232 6666666666666666665433 6666666666666666652
Q ss_pred cccCCCcccccccccccccccccccccCCCCcccccccccceeeccCcccccchhhhhhccccccEEecCCCcccc
Q 045798 482 HLVGIIPPRIGNLRALRSFDVSNNDLSGEIPIELGHCSSLEEIYLAGNLFHGSIPSFFNALKGVQKIDLSRNNLSG 557 (1008)
Q Consensus 482 ~l~~~~p~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~ 557 (1008)
++. +..+++|+.|++++|.+++. |. +..+++|++|+|++|++++..| +..+++|+.|+|++|++++
T Consensus 166 -----~~~-l~~l~~L~~L~l~~n~l~~~-~~-l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 166 -----LTP-LANLSKLTTLKADDNKISDI-SP-LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp -----CGG-GTTCTTCCEEECCSSCCCCC-GG-GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEEC
T ss_pred -----Chh-hcCCCCCCEEECCCCccCcC-hh-hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeec
Confidence 222 66677788888888877743 33 6777788888888888875543 6777888888888888775
No 343
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.87 E-value=8.3e-24 Score=235.36 Aligned_cols=271 Identities=18% Similarity=0.213 Sum_probs=154.3
Q ss_pred CCCCcccceEEcCCCCeEEEEeccccCCCCccCcCccCC--ccCCeeeecCCCCCCCCCccccCCCCCCEEEccCCCCCC
Q 045798 39 RHFCEWEGITCGRRHRRVTALDLMSKSLSGSLSPHLGNL--SFLREINLSNNTIQGEIPPEFGRLFRLEALFLSNNSLVG 116 (1008)
Q Consensus 39 ~~~c~w~gv~c~~~~~~v~~l~l~~~~l~~~l~~~l~~l--~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~ 116 (1008)
.-|..|.++.|+.. .++.+|++++.+. +..+..+ +.++.|++++|.+++..+. +..+++|++|+|++|.+++
T Consensus 34 ~vc~~W~~~~~~~~--~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~ 107 (336)
T 2ast_B 34 GVCKRWYRLASDES--LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEV 107 (336)
T ss_dssp SSCHHHHHHHTCST--TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECH
T ss_pred HHHHHHHHHhcCch--hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCH
Confidence 34568999887532 3556777766655 3344555 6677777777777655443 4456667777777666664
Q ss_pred c-cCcccccCcCcceEeeeccccccCCCccccccCCCCeeecccc-cCCCCCCCCCccccccchhhcccccCCCCCCccc
Q 045798 117 K-IPANLSYCSRLTVLCIEYNKLQGRIPLEFVSLSKLKDLSLAKN-KLTGGIPPFLGNLTSLEVLSLAGNSFGRNIPDSL 194 (1008)
Q Consensus 117 ~-~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n-~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 194 (1008)
. +|..+..+++|++|+|++|.+++..+..++.+++|++|++++| .+++. .++..+
T Consensus 108 ~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~-----------------------~l~~~~ 164 (336)
T 2ast_B 108 STLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEF-----------------------ALQTLL 164 (336)
T ss_dssp HHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHH-----------------------HHHHHH
T ss_pred HHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHH-----------------------HHHHHH
Confidence 4 5556666666666666666666555555555666666666655 34421 123334
Q ss_pred cCCCCCcEEEecCC-ccccc-CCccccCCC-Ccceecccccc--cc-ccCChhhhhcCCCCcEEEecccc-CCCCCCccc
Q 045798 195 GQLKQLKILAIGGN-NLSGP-IPPSIYNLS-FLVVFSVSHNQ--IH-GSLPPSLGLLLPNLKFFQIHHNF-FSGSIPISL 267 (1008)
Q Consensus 195 ~~l~~L~~L~L~~n-~l~~~-~~~~~~~l~-~L~~L~ls~N~--l~-~~lp~~~~~~l~~L~~L~L~~N~-l~~~~p~~l 267 (1008)
..+++|++|++++| .+++. ++..+..++ +|++|++++|. ++ +.+|.. +..+++|++|+|++|. +++..+..+
T Consensus 165 ~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~-~~~~~~L~~L~l~~~~~l~~~~~~~l 243 (336)
T 2ast_B 165 SSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTL-VRRCPNLVHLDLSDSVMLKNDCFQEF 243 (336)
T ss_dssp HHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHH-HHHCTTCSEEECTTCTTCCGGGGGGG
T ss_pred hcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHH-HhhCCCCCEEeCCCCCcCCHHHHHHH
Confidence 44455555555555 44432 334445555 55555555552 22 123332 2235666666666666 444555566
Q ss_pred ccCCCCceeecccccccccccccccCCCcccccccccccCCCCCCCcccccccccccCCCcEEEecCCcCCccCChhhhh
Q 045798 268 SNASKLEHIEIANNNFSGKLSVNFGGMKNLSLLNLQFSNLGSGESDEMGFMNSLTNCSKLRVLSLGGNQFRGALPHSIAN 347 (1008)
Q Consensus 268 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~ 347 (1008)
..+++|++|++++|. ...+.. ...+..+++|+.|++++| +. ...+..
T Consensus 244 ~~l~~L~~L~l~~~~--~~~~~~---------------------------~~~l~~~~~L~~L~l~~~-i~---~~~~~~ 290 (336)
T 2ast_B 244 FQLNYLQHLSLSRCY--DIIPET---------------------------LLELGEIPTLKTLQVFGI-VP---DGTLQL 290 (336)
T ss_dssp GGCTTCCEEECTTCT--TCCGGG---------------------------GGGGGGCTTCCEEECTTS-SC---TTCHHH
T ss_pred hCCCCCCEeeCCCCC--CCCHHH---------------------------HHHHhcCCCCCEEeccCc-cC---HHHHHH
Confidence 666666666666664 111111 123456777888888877 33 223444
Q ss_pred hcccceeeeeccccccCCCCCcccc
Q 045798 348 LSSQLQILILSSNQFYGSIPLGIGN 372 (1008)
Q Consensus 348 l~~~L~~L~Ls~N~l~~~~p~~~~~ 372 (1008)
+...+..|++++|++++..|..+++
T Consensus 291 l~~~l~~L~l~~n~l~~~~~~~~~~ 315 (336)
T 2ast_B 291 LKEALPHLQINCSHFTTIARPTIGN 315 (336)
T ss_dssp HHHHSTTSEESCCCSCCTTCSSCSS
T ss_pred HHhhCcceEEecccCccccCCcccc
Confidence 4345777888888888777766654
No 344
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.87 E-value=3.5e-24 Score=243.07 Aligned_cols=246 Identities=19% Similarity=0.272 Sum_probs=163.8
Q ss_pred ccccccccCCCcEEEecCCcCCccCChhh----hhhcccceeeeeccc---cccCCCCCcc-------ccccccceEEec
Q 045798 317 FMNSLTNCSKLRVLSLGGNQFRGALPHSI----ANLSSQLQILILSSN---QFYGSIPLGI-------GNLVDLYLLGMV 382 (1008)
Q Consensus 317 ~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~----~~l~~~L~~L~Ls~N---~l~~~~p~~~-------~~l~~L~~L~L~ 382 (1008)
+...+..+++|+.|+|++|++....+..+ ..+. +|++|+|++| ++++.+|..+ ..+++|++|+|+
T Consensus 24 l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~-~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls 102 (386)
T 2ca6_A 24 VFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKK-DLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 102 (386)
T ss_dssp TSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCT-TCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCC-CccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECC
Confidence 34456677778888888887775544433 2333 4777777775 3334444443 455666666666
Q ss_pred CccccC----CcchhccCCCCCceEEccCCccccccccccc----CC---------CCcceeeccccccc-cccC---CC
Q 045798 383 ENQFTG----AIPKEMGKLQKLQGLDFSGNHFSGEIPSSLG----NL---------SSLYEVFFNNNNLS-GVIP---FS 441 (1008)
Q Consensus 383 ~n~l~~----~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~----~l---------~~L~~L~l~~N~l~-~~~p---~~ 441 (1008)
+|.+.+ .+|..+..+++|++|+|++|.+++..+..+. .+ ++|++|+|++|.++ +.+| ..
T Consensus 103 ~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 182 (386)
T 2ca6_A 103 DNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKT 182 (386)
T ss_dssp SCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHH
T ss_pred CCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHH
Confidence 666665 3555666666666666666666533332222 22 55566666666554 2223 23
Q ss_pred CcCCCcccEeecccccccCCcchhhhhhhhhhhhhcccCccccCCCccccccccccccccccccccc----CCCCccccc
Q 045798 442 LGNLKRLAFLEMSGNELSGTIPEDIFNISYLSNSLNLARNHLVGIIPPRIGNLRALRSFDVSNNDLS----GEIPIELGH 517 (1008)
Q Consensus 442 ~~~l~~L~~L~Ls~N~l~~~lp~~~~~~~~~~~~L~L~~N~l~~~~p~~~~~l~~L~~Ldls~N~l~----~~~p~~~~~ 517 (1008)
+..+++|+.|+|++|+++. ..+ ....|..+..+++|+.|+|++|.++ +.+|..+..
T Consensus 183 l~~~~~L~~L~L~~n~l~~---~g~-----------------~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~ 242 (386)
T 2ca6_A 183 FQSHRLLHTVKMVQNGIRP---EGI-----------------EHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKS 242 (386)
T ss_dssp HHHCTTCCEEECCSSCCCH---HHH-----------------HHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGG
T ss_pred HHhCCCcCEEECcCCCCCH---hHH-----------------HHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHcc
Confidence 4455555555555555541 000 0023447888999999999999996 578889999
Q ss_pred ccccceeeccCcccccc----hhhhhhc--cccccEEecCCCcccc----cccCcc--cccccceeecccCcccccCC
Q 045798 518 CSSLEEIYLAGNLFHGS----IPSFFNA--LKGVQKIDLSRNNLSG----QIPIFL--EALSLEYLNLSFNDFEGKIP 583 (1008)
Q Consensus 518 l~~L~~L~L~~N~l~~~----~p~~~~~--l~~L~~L~ls~N~l~~----~~p~~~--~~~~L~~L~l~~N~l~g~~p 583 (1008)
+++|++|+|++|++++. +|..+.. +++|+.|+|++|++++ .+|... .+.+|++|++++|.+++..|
T Consensus 243 ~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 243 WPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp CTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred CCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 99999999999999976 6777744 9999999999999998 477653 46889999999999998765
No 345
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.87 E-value=7.1e-22 Score=220.42 Aligned_cols=205 Identities=16% Similarity=0.116 Sum_probs=146.6
Q ss_pred CCCcccceEEcCCCCeEEEEeccccCCCCccCcCccCCccCCeeeecCCCCCCCCCccccCCCCCCEEEccCCCCCCccC
Q 045798 40 HFCEWEGITCGRRHRRVTALDLMSKSLSGSLSPHLGNLSFLREINLSNNTIQGEIPPEFGRLFRLEALFLSNNSLVGKIP 119 (1008)
Q Consensus 40 ~~c~w~gv~c~~~~~~v~~l~l~~~~l~~~l~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p 119 (1008)
+.|+|..|.|. +++++ .+|..+. +++++|+|++|+|+...+.+|.++++|++|+|++|++.+.+|
T Consensus 7 C~C~~~~v~C~------------~~~Lt-~iP~~l~--~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~ 71 (350)
T 4ay9_X 7 CHCSNRVFLCQ------------ESKVT-EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIE 71 (350)
T ss_dssp SEEETTEEEEE------------STTCC-SCCTTCC--TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEEC
T ss_pred cEeeCCEEEec------------CCCCC-ccCcCcC--CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccC
Confidence 44677777774 34555 5776663 578999999999996556689999999999999999876665
Q ss_pred -cccccCcCcce-EeeeccccccCCCccccccCCCCeeecccccCCCCCCCCCccccccchhhccc-ccCCCCCCccccC
Q 045798 120 -ANLSYCSRLTV-LCIEYNKLQGRIPLEFVSLSKLKDLSLAKNKLTGGIPPFLGNLTSLEVLSLAG-NSFGRNIPDSLGQ 196 (1008)
Q Consensus 120 -~~l~~l~~L~~-L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~-n~l~~~~~~~~~~ 196 (1008)
.+|.++++|+. +.++.|+++...|..|..+++|++|++++|+++...+..+....++..|++.+ |++....+..|..
T Consensus 72 ~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~ 151 (350)
T 4ay9_X 72 ADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVG 151 (350)
T ss_dssp TTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTT
T ss_pred hhHhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhh
Confidence 46788888765 56677888877788888899999999999998866666666677777788755 5666656666766
Q ss_pred CC-CCcEEEecCCcccccCCccccCCCCcceecccc-ccccccCChhhhhcCCCCcEEEeccccCCC
Q 045798 197 LK-QLKILAIGGNNLSGPIPPSIYNLSFLVVFSVSH-NQIHGSLPPSLGLLLPNLKFFQIHHNFFSG 261 (1008)
Q Consensus 197 l~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ls~-N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~ 261 (1008)
+. .++.|+|++|+|+.+.+..| ...+|+.|++++ |.++ .+|...+..+++|++|+|++|+|+.
T Consensus 152 ~~~~l~~L~L~~N~i~~i~~~~f-~~~~L~~l~l~~~n~l~-~i~~~~f~~l~~L~~LdLs~N~l~~ 216 (350)
T 4ay9_X 152 LSFESVILWLNKNGIQEIHNSAF-NGTQLDELNLSDNNNLE-ELPNDVFHGASGPVILDISRTRIHS 216 (350)
T ss_dssp SBSSCEEEECCSSCCCEECTTSS-TTEEEEEEECTTCTTCC-CCCTTTTTTEECCSEEECTTSCCCC
T ss_pred cchhhhhhccccccccCCChhhc-cccchhHHhhccCCccc-CCCHHHhccCcccchhhcCCCCcCc
Confidence 64 57778888888775444333 445677777764 4444 6666655555666666666666553
No 346
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.87 E-value=5.8e-23 Score=228.54 Aligned_cols=251 Identities=15% Similarity=0.153 Sum_probs=192.7
Q ss_pred CCcEEEecCCcCCccCChhhhhh-cccceeeeeccccccCCCCCccccccccceEEecCccccCC-cchhccCCCCCceE
Q 045798 326 KLRVLSLGGNQFRGALPHSIANL-SSQLQILILSSNQFYGSIPLGIGNLVDLYLLGMVENQFTGA-IPKEMGKLQKLQGL 403 (1008)
Q Consensus 326 ~L~~L~Ls~N~l~~~~p~~~~~l-~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~-~~~~~~~l~~L~~L 403 (1008)
.++.+++++|.+. +..+..+ ...++.|++++|.+.+..+. +..+++|++|++++|.+++. ++..+..+++|++|
T Consensus 48 ~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L 123 (336)
T 2ast_B 48 LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNL 123 (336)
T ss_dssp TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEE
T ss_pred hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEE
Confidence 3667888888776 4445544 13588888888888866555 55788888888888888765 77788888888888
Q ss_pred EccCCcccccccccccCCCCcceeecccc-ccccc-cCCCCcCCCcccEeecccc-cccCC-cchhhhhhhhhhhhhccc
Q 045798 404 DFSGNHFSGEIPSSLGNLSSLYEVFFNNN-NLSGV-IPFSLGNLKRLAFLEMSGN-ELSGT-IPEDIFNISYLSNSLNLA 479 (1008)
Q Consensus 404 ~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N-~l~~~-~p~~~~~l~~L~~L~Ls~N-~l~~~-lp~~~~~~~~~~~~L~L~ 479 (1008)
+|++|.+++..+..++.+++|++|++++| .+++. ++..+.++++|+.|++++| .+++. +|..+......++.|+|+
T Consensus 124 ~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~ 203 (336)
T 2ast_B 124 SLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLS 203 (336)
T ss_dssp ECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECC
T ss_pred eCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeC
Confidence 88888888778888888888888888888 67653 5666778888888888888 88743 444444444256788888
Q ss_pred Cc--ccc-CCCccccccccccccccccccc-ccCCCCcccccccccceeeccCcc-cccchhhhhhccccccEEecCCCc
Q 045798 480 RN--HLV-GIIPPRIGNLRALRSFDVSNND-LSGEIPIELGHCSSLEEIYLAGNL-FHGSIPSFFNALKGVQKIDLSRNN 554 (1008)
Q Consensus 480 ~N--~l~-~~~p~~~~~l~~L~~Ldls~N~-l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~ls~N~ 554 (1008)
+| .++ +.+|..+..+++|+.|++++|. +++..+..+..+++|++|+|++|. +.......++.+++|+.|+|++|
T Consensus 204 ~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~- 282 (336)
T 2ast_B 204 GYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI- 282 (336)
T ss_dssp SCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-
T ss_pred CCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-
Confidence 88 454 4567778889999999999999 777888899999999999999995 33222236888999999999999
Q ss_pred ccccccCc--ccc-cccceeecccCcccccCCCC
Q 045798 555 LSGQIPIF--LEA-LSLEYLNLSFNDFEGKIPAK 585 (1008)
Q Consensus 555 l~~~~p~~--~~~-~~L~~L~l~~N~l~g~~p~~ 585 (1008)
++.. ..+ ..+..|++++|.++|..|..
T Consensus 283 ----i~~~~~~~l~~~l~~L~l~~n~l~~~~~~~ 312 (336)
T 2ast_B 283 ----VPDGTLQLLKEALPHLQINCSHFTTIARPT 312 (336)
T ss_dssp ----SCTTCHHHHHHHSTTSEESCCCSCCTTCSS
T ss_pred ----cCHHHHHHHHhhCcceEEecccCccccCCc
Confidence 3332 233 24889999999999998864
No 347
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.86 E-value=2.7e-22 Score=215.41 Aligned_cols=162 Identities=19% Similarity=0.128 Sum_probs=125.1
Q ss_pred HHHHhcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccc------------------hhhHHHHHHHHHHhhcCC
Q 045798 679 LLKATNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCE------------------GASKSFMAECKALKNIRH 740 (1008)
Q Consensus 679 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~------------------~~~~~~~~E~~~l~~l~h 740 (1008)
+......|.+.+.||+|+||.||+|.+ .+|+.||+|+++.... .....+.+|++++++++|
T Consensus 85 ~~~~~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~~ 163 (282)
T 1zar_A 85 LVRSGKVDAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQG 163 (282)
T ss_dssp HHHTTSCSEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHhCCeEEEecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhccC
Confidence 344455677789999999999999999 7899999999964321 134578999999999984
Q ss_pred CCceeeeeccccccccCCceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCc
Q 045798 741 RNLVKVITSCSSIDFQGNDFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPI 820 (1008)
Q Consensus 741 ~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i 820 (1008)
+++.+++. .+..++||||+++++|.+ +... ....++.|++.||+|||+. +|
T Consensus 164 ---~~v~~~~~------~~~~~lvmE~~~g~~L~~-l~~~----------------~~~~i~~qi~~~l~~lH~~---gi 214 (282)
T 1zar_A 164 ---LAVPKVYA------WEGNAVLMELIDAKELYR-VRVE----------------NPDEVLDMILEEVAKFYHR---GI 214 (282)
T ss_dssp ---SSSCCEEE------EETTEEEEECCCCEEGGG-CCCS----------------CHHHHHHHHHHHHHHHHHT---TE
T ss_pred ---CCcCeEEe------ccceEEEEEecCCCcHHH-cchh----------------hHHHHHHHHHHHHHHHHHC---CC
Confidence 55555421 134699999999999998 4211 2346999999999999998 99
Q ss_pred eeccCCCCCeeecCCCCeEEcccCcccccccccCccccccccccccccccCccccCC----------CCCCcccchhh
Q 045798 821 LHCDLKPSNILLDNDLSGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLG----------SEVSTNGDVYS 888 (1008)
Q Consensus 821 vH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----------~~~~~~sDvws 888 (1008)
+||||||+|||++ ++.+||+|||+|+ .+..|+|||++.. ..+...+|+|.
T Consensus 215 iHrDlkp~NILl~-~~~vkl~DFG~a~-----------------~~~~~~a~e~l~rdv~~i~~~f~~~~~~~~~~~~ 274 (282)
T 1zar_A 215 VHGDLSQYNVLVS-EEGIWIIDFPQSV-----------------EVGEEGWREILERDVRNIITYFSRTYRTEKDINS 274 (282)
T ss_dssp ECSCCSTTSEEEE-TTEEEECCCTTCE-----------------ETTSTTHHHHHHHHHHHHHHHHHHHHCCCCCHHH
T ss_pred EeCCCCHHHEEEE-CCcEEEEECCCCe-----------------ECCCCCHHHHHHHHHHHHHHHHHHhcCCCCChHH
Confidence 9999999999999 9999999999996 3445788887643 23455556654
No 348
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.86 E-value=1.3e-21 Score=200.90 Aligned_cols=184 Identities=23% Similarity=0.238 Sum_probs=143.8
Q ss_pred CCCCCcccceEEcCCCCeEEEEeccccCCCCccCcCccCCccCCeeeecCCCCCCCCCccccCCCCCCEEEccCCCCCCc
Q 045798 38 SRHFCEWEGITCGRRHRRVTALDLMSKSLSGSLSPHLGNLSFLREINLSNNTIQGEIPPEFGRLFRLEALFLSNNSLVGK 117 (1008)
Q Consensus 38 ~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~~~l~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~ 117 (1008)
..+.|.|.+|.|... +++ .+|..+ .++|++|+|++|++++..+..|..+++|++|+|++|++++.
T Consensus 3 ~~C~C~~~~v~c~~~------------~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 67 (208)
T 2o6s_A 3 SRCSCSGTTVECYSQ------------GRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSL 67 (208)
T ss_dssp TTCEEETTEEECCSS------------CCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCC
T ss_pred CCCEECCCEEEecCC------------Ccc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCcc
Confidence 356789999999642 333 345444 35889999999999977777788999999999999999976
Q ss_pred cCcccccCcCcceEeeeccccccCCCccccccCCCCeeecccccCCCCCCCCCccccccchhhcccccCCCCCCccccCC
Q 045798 118 IPANLSYCSRLTVLCIEYNKLQGRIPLEFVSLSKLKDLSLAKNKLTGGIPPFLGNLTSLEVLSLAGNSFGRNIPDSLGQL 197 (1008)
Q Consensus 118 ~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 197 (1008)
.+..|..+++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|.++++|++|++++|++++..+..|..+
T Consensus 68 ~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l 147 (208)
T 2o6s_A 68 PNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRL 147 (208)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTC
T ss_pred ChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccC
Confidence 66778889999999999999987767778888889999998888886666667888888888888888877666678888
Q ss_pred CCCcEEEecCCcccccCCccccCCCCcceeccccccccccCChhhh
Q 045798 198 KQLKILAIGGNNLSGPIPPSIYNLSFLVVFSVSHNQIHGSLPPSLG 243 (1008)
Q Consensus 198 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~lp~~~~ 243 (1008)
++|+.|++++|.+.+ .+++|+.|+++.|+++|.+|..+.
T Consensus 148 ~~L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~ip~~~~ 186 (208)
T 2o6s_A 148 TSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAG 186 (208)
T ss_dssp TTCCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTBBCTTS
T ss_pred CCccEEEecCCCeec-------CCCCHHHHHHHHHhCCceeeccCc
Confidence 888888888887653 345677777777777776666543
No 349
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.86 E-value=1.4e-21 Score=213.51 Aligned_cols=195 Identities=27% Similarity=0.351 Sum_probs=141.0
Q ss_pred ccCCccCCeeeecCCCCCCCCCccccCCCCCCEEEccCCCCCCccCcccccCcCcceEeeeccccccCCCccccccCCCC
Q 045798 74 LGNLSFLREINLSNNTIQGEIPPEFGRLFRLEALFLSNNSLVGKIPANLSYCSRLTVLCIEYNKLQGRIPLEFVSLSKLK 153 (1008)
Q Consensus 74 l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~ 153 (1008)
...+++|++|++++|.++ .+| .+..+++|++|+|++|.+++..+ +..+++|++|+|++|++++. + .+..+++|+
T Consensus 37 ~~~l~~L~~L~l~~~~i~-~l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~ 110 (308)
T 1h6u_A 37 QADLDGITTLSAFGTGVT-TIE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV-S-AIAGLQSIK 110 (308)
T ss_dssp HHHHHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC-G-GGTTCTTCC
T ss_pred HHHcCCcCEEEeeCCCcc-Cch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc-h-hhcCCCCCC
Confidence 345677888888888877 344 57778888888888888875444 77888888888888888753 3 577788888
Q ss_pred eeecccccCCCCCCCCCccccccchhhcccccCCCCCCccccCCCCCcEEEecCCcccccCCccccCCCCcceecccccc
Q 045798 154 DLSLAKNKLTGGIPPFLGNLTSLEVLSLAGNSFGRNIPDSLGQLKQLKILAIGGNNLSGPIPPSIYNLSFLVVFSVSHNQ 233 (1008)
Q Consensus 154 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ls~N~ 233 (1008)
+|++++|++++. + .+..+++|++|++++|++++..+ +..+++|+.|++++|.+++..+ +..+++|+.|++++|+
T Consensus 111 ~L~l~~n~l~~~-~-~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~ 184 (308)
T 1h6u_A 111 TLDLTSTQITDV-T-PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNK 184 (308)
T ss_dssp EEECTTSCCCCC-G-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSC
T ss_pred EEECCCCCCCCc-h-hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCc
Confidence 888888888743 3 27777888888888888765443 7778888888888888875433 7777778888888887
Q ss_pred ccccCChhhhhcCCCCcEEEeccccCCCCCCcccccCCCCceeecccccccc
Q 045798 234 IHGSLPPSLGLLLPNLKFFQIHHNFFSGSIPISLSNASKLEHIEIANNNFSG 285 (1008)
Q Consensus 234 l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 285 (1008)
++ .++. +..+++|++|+|++|.+.+.. .+..+++|+.|++++|++++
T Consensus 185 l~-~~~~--l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 185 IS-DISP--LASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp CC-CCGG--GGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEEEEEEEC
T ss_pred cC-cChh--hcCCCCCCEEEccCCccCccc--cccCCCCCCEEEccCCeeec
Confidence 76 4443 344677777777777777544 26677777777777777764
No 350
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.86 E-value=1.8e-21 Score=217.22 Aligned_cols=240 Identities=20% Similarity=0.089 Sum_probs=190.7
Q ss_pred CeeeecCCCCCCCCCccccCCCCCCEEEccCCCCCCccCcccccCcCcceEeeeccccccCCC-ccccccCCCCe-eecc
Q 045798 81 REINLSNNTIQGEIPPEFGRLFRLEALFLSNNSLVGKIPANLSYCSRLTVLCIEYNKLQGRIP-LEFVSLSKLKD-LSLA 158 (1008)
Q Consensus 81 ~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p-~~~~~l~~L~~-L~L~ 158 (1008)
++++.++++++ .+|..+ .+++++|+|++|+|+...+.+|+++++|++|+|++|++.+.+| ..|.++++|++ +.++
T Consensus 12 ~~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp TEEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred CEEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 56888999999 788766 3689999999999995555689999999999999999876555 57888988876 6667
Q ss_pred cccCCCCCCCCCccccccchhhcccccCCCCCCccccCCCCCcEEEecC-CcccccCCccccCCC-Ccceeccccccccc
Q 045798 159 KNKLTGGIPPFLGNLTSLEVLSLAGNSFGRNIPDSLGQLKQLKILAIGG-NNLSGPIPPSIYNLS-FLVVFSVSHNQIHG 236 (1008)
Q Consensus 159 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~-n~l~~~~~~~~~~l~-~L~~L~ls~N~l~~ 236 (1008)
+|+|+...|..|.++++|++|++++|++....+..+....++..|++.+ |.+..+.+..|..+. .++.|+|++|+|+
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~- 167 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ- 167 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC-
T ss_pred CCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhcccccccc-
Confidence 8999977788999999999999999999887777888888899999976 678777777788775 5889999999998
Q ss_pred cCChhhhhcCCCCcEEEecc-ccCCCCCCcccccCCCCceeecccccccccccccccCCCcccccccccccCCCCCCCcc
Q 045798 237 SLPPSLGLLLPNLKFFQIHH-NFFSGSIPISLSNASKLEHIEIANNNFSGKLSVNFGGMKNLSLLNLQFSNLGSGESDEM 315 (1008)
Q Consensus 237 ~lp~~~~~~l~~L~~L~L~~-N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 315 (1008)
.+|..++. ..+|+.|++.+ |.++...+..|..+++|++|++++|+|+.+.+..|.++++|+.+++. ++..++
T Consensus 168 ~i~~~~f~-~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~~L~~l~~~--~l~~lP---- 240 (350)
T 4ay9_X 168 EIHNSAFN-GTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTY--NLKKLP---- 240 (350)
T ss_dssp EECTTSST-TEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTCCEEECTTCT--TCCCCC----
T ss_pred CCChhhcc-ccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhccchHhhhccCC--CcCcCC----
Confidence 78877765 46788899875 66665445678889999999999999988877777777777766653 333322
Q ss_pred cccccccccCCCcEEEecCC
Q 045798 316 GFMNSLTNCSKLRVLSLGGN 335 (1008)
Q Consensus 316 ~~~~~l~~l~~L~~L~Ls~N 335 (1008)
++..+++|+.++++++
T Consensus 241 ----~l~~l~~L~~l~l~~~ 256 (350)
T 4ay9_X 241 ----TLEKLVALMEASLTYP 256 (350)
T ss_dssp ----CTTTCCSCCEEECSCH
T ss_pred ----CchhCcChhhCcCCCC
Confidence 3556667777776543
No 351
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.85 E-value=4.8e-22 Score=232.74 Aligned_cols=214 Identities=23% Similarity=0.306 Sum_probs=140.3
Q ss_pred CCCCCCCCCCC-----cccce-EEcCCCCeEEEEeccccCCCCccCcCccCCccCCeeeecCCCCCCCCCccccCCCCCC
Q 045798 32 LNSWNDSRHFC-----EWEGI-TCGRRHRRVTALDLMSKSLSGSLSPHLGNLSFLREINLSNNTIQGEIPPEFGRLFRLE 105 (1008)
Q Consensus 32 ~~~w~~~~~~c-----~w~gv-~c~~~~~~v~~l~l~~~~l~~~l~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~ 105 (1008)
+.+|..+.+.| .|.|+ .|.. .+++.|+|+++++++ +|..+. ++|++|+|++|+|+ .+| ..+++|+
T Consensus 33 l~~W~~~~~~~~~~~~~~~~l~~C~~--~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~ 103 (571)
T 3cvr_A 33 WDKWEKQALPGENRNEAVSLLKECLI--NQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLE 103 (571)
T ss_dssp HHHHHTTCCTTCCHHHHHHHHHHHHH--TTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCC
T ss_pred HHHHhccCCccccccchhhhcccccc--CCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCC
Confidence 45676666777 79999 6854 368888888888886 777664 77888888888888 666 4578888
Q ss_pred EEEccCCCCCCccCcccccCcCcceEeeeccccccCCCccccccCCCCeeecccccCCCCCCCCCccccccchhhccccc
Q 045798 106 ALFLSNNSLVGKIPANLSYCSRLTVLCIEYNKLQGRIPLEFVSLSKLKDLSLAKNKLTGGIPPFLGNLTSLEVLSLAGNS 185 (1008)
Q Consensus 106 ~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 185 (1008)
+|+|++|+|++ +|. +.. +|++|+|++|+|++ +|. .+++|++|+|++|+|++ +|. .+++|++|+|++|+
T Consensus 104 ~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~ 171 (571)
T 3cvr_A 104 YLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQ 171 (571)
T ss_dssp EEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSC
T ss_pred EEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCC
Confidence 88888888885 666 554 88888888888885 554 56788888888888874 554 45677777777777
Q ss_pred CCCCCCccccCCCCCcEEEecCCcccccCCccccCCCCcceeccccccccccCChhhhhcCCCCcEEEeccccCCCCCCc
Q 045798 186 FGRNIPDSLGQLKQLKILAIGGNNLSGPIPPSIYNLSFLVVFSVSHNQIHGSLPPSLGLLLPNLKFFQIHHNFFSGSIPI 265 (1008)
Q Consensus 186 l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~ 265 (1008)
+++ +|. |. ++|+.|+|++|+|+ .+|. |.. +| +...+.|+.|+|++|.|+ .+|.
T Consensus 172 L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L------------------~~~~~~L~~L~Ls~N~l~-~lp~ 224 (571)
T 3cvr_A 172 LTF-LPE-LP--ESLEALDVSTNLLE-SLPA-VPV--RN------------------HHSEETEIFFRCRENRIT-HIPE 224 (571)
T ss_dssp CSC-CCC-CC--TTCCEEECCSSCCS-SCCC-CC----------------------------CCEEEECCSSCCC-CCCG
T ss_pred CCC-cch-hh--CCCCEEECcCCCCC-chhh-HHH--hh------------------hcccccceEEecCCCcce-ecCH
Confidence 755 555 54 67777777777776 3444 433 44 000112244444444444 3444
Q ss_pred ccccCCCCceeecccccccccccccccC
Q 045798 266 SLSNASKLEHIEIANNNFSGKLSVNFGG 293 (1008)
Q Consensus 266 ~l~~l~~L~~L~L~~N~l~~~~~~~~~~ 293 (1008)
.+..+++|+.|+|++|++++..|..|..
T Consensus 225 ~l~~l~~L~~L~L~~N~l~~~~p~~l~~ 252 (571)
T 3cvr_A 225 NILSLDPTCTIILEDNPLSSRIRESLSQ 252 (571)
T ss_dssp GGGGSCTTEEEECCSSSCCHHHHHHHHH
T ss_pred HHhcCCCCCEEEeeCCcCCCcCHHHHHH
Confidence 4445555555555555555555554444
No 352
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.84 E-value=8e-21 Score=222.43 Aligned_cols=188 Identities=22% Similarity=0.320 Sum_probs=93.3
Q ss_pred CCcEEEecCCcCCccCChhhhhhcccceeeeeccccccCCCCCccccccccceEEecCccccCCcchhccCCCCCceEEc
Q 045798 326 KLRVLSLGGNQFRGALPHSIANLSSQLQILILSSNQFYGSIPLGIGNLVDLYLLGMVENQFTGAIPKEMGKLQKLQGLDF 405 (1008)
Q Consensus 326 ~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 405 (1008)
+|+.|+|++|.+++ +|..+. ++|++|+|++|+|+ .+| ..+++|+.|+|++|+|++ +|. +.. +|+.|+|
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~---~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~L 127 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP---PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDV 127 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC---TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEEC
T ss_pred CccEEEeCCCCCCc-cCHhHc---CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEEC
Confidence 45555555555553 444332 23555555555555 444 234555555555555554 333 333 5555555
Q ss_pred cCCcccccccccccCCCCcceeeccccccccccCCCCcCCCcccEeecccccccCCcchhhhhhhhhhhhhcccCccccC
Q 045798 406 SGNHFSGEIPSSLGNLSSLYEVFFNNNNLSGVIPFSLGNLKRLAFLEMSGNELSGTIPEDIFNISYLSNSLNLARNHLVG 485 (1008)
Q Consensus 406 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~~~~~~~~~~~~L~L~~N~l~~ 485 (1008)
++|+|++ +|. .+++|+.|+|++|.|++ +|. .+++|+.|+|++|+|++ +|. +. ..++.|+|++|+|+
T Consensus 128 s~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~---~~L~~L~Ls~N~L~- 193 (571)
T 3cvr_A 128 DNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP---ESLEALDVSTNLLE- 193 (571)
T ss_dssp CSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC---TTCCEEECCSSCCS-
T ss_pred CCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh---CCCCEEECcCCCCC-
Confidence 5555553 343 34555555555555554 333 34555555555555552 333 11 22233333333333
Q ss_pred CCcccccccccc-------cccccccccccCCCCcccccccccceeeccCcccccchhhhhhccc
Q 045798 486 IIPPRIGNLRAL-------RSFDVSNNDLSGEIPIELGHCSSLEEIYLAGNLFHGSIPSFFNALK 543 (1008)
Q Consensus 486 ~~p~~~~~l~~L-------~~Ldls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 543 (1008)
.+|. |.. +| +.|+|++|.|+ .+|..+..+++|+.|+|++|+|++.+|..|..++
T Consensus 194 ~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 254 (571)
T 3cvr_A 194 SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQT 254 (571)
T ss_dssp SCCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHH
T ss_pred chhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhh
Confidence 2333 222 33 55666666665 4555555556666666666666555555555544
No 353
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.83 E-value=2.3e-20 Score=191.71 Aligned_cols=181 Identities=23% Similarity=0.189 Sum_probs=144.9
Q ss_pred CeeeecCCCCCCCCCccccCCCCCCEEEccCCCCCCccCcccccCcCcceEeeeccccccCCCccccccCCCCeeecccc
Q 045798 81 REINLSNNTIQGEIPPEFGRLFRLEALFLSNNSLVGKIPANLSYCSRLTVLCIEYNKLQGRIPLEFVSLSKLKDLSLAKN 160 (1008)
Q Consensus 81 ~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n 160 (1008)
+.++++++.++ .+|..+ .++|++|+|++|++++..+..++.+++|++|+|++|++++..+..|..+++|++|+|++|
T Consensus 10 ~~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 46778888887 566544 468999999999999777777889999999999999999776777888999999999999
Q ss_pred cCCCCCCCCCccccccchhhcccccCCCCCCccccCCCCCcEEEecCCcccccCCccccCCCCcceeccccccccccCCh
Q 045798 161 KLTGGIPPFLGNLTSLEVLSLAGNSFGRNIPDSLGQLKQLKILAIGGNNLSGPIPPSIYNLSFLVVFSVSHNQIHGSLPP 240 (1008)
Q Consensus 161 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~lp~ 240 (1008)
++++..+..|.++++|++|++++|++++..+..|..+++|++|++++|++++..+..|..+++|+.|++++|.+.+.
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~--- 163 (208)
T 2o6s_A 87 QLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT--- 163 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCC---
T ss_pred cCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecC---
Confidence 99866666788888999999999998877777788888899999988888877676788888888888888877632
Q ss_pred hhhhcCCCCcEEEeccccCCCCCCcccccCCC
Q 045798 241 SLGLLLPNLKFFQIHHNFFSGSIPISLSNASK 272 (1008)
Q Consensus 241 ~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 272 (1008)
+++|++|+++.|.++|.+|..++.++.
T Consensus 164 -----~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 164 -----CPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp -----TTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred -----CCCHHHHHHHHHhCCceeeccCccccC
Confidence 356677777777777777766665544
No 354
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.83 E-value=3.8e-20 Score=192.77 Aligned_cols=164 Identities=25% Similarity=0.277 Sum_probs=133.0
Q ss_pred CCCCCCCCCCcccceEEcCCCCeEEEEeccccCCCCccCcCccCCccCCeeeecCCCCCCCCCccccCCCCCCEEEccCC
Q 045798 33 NSWNDSRHFCEWEGITCGRRHRRVTALDLMSKSLSGSLSPHLGNLSFLREINLSNNTIQGEIPPEFGRLFRLEALFLSNN 112 (1008)
Q Consensus 33 ~~w~~~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~~~l~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n 112 (1008)
.-|..+++.|+|++|.|... .++ .+|..+. ++|++|+|++|++++..|..|..+++|++|+|++|
T Consensus 10 ~~~~~~~~~Cs~~~v~c~~~------------~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N 74 (229)
T 3e6j_A 10 SAACPSQCSCSGTTVDCRSK------------RHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSN 74 (229)
T ss_dssp -CCCCTTCEEETTEEECTTS------------CCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred hccCCCCCEEeCCEeEccCC------------CcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCC
Confidence 44667789999999999642 233 5666554 78999999999999888888999999999999999
Q ss_pred CCCCccCcccccCcCcceEeeeccccccCCCccccccCCCCeeecccccCCCCCCCCCccccccchhhcccccCCCCCCc
Q 045798 113 SLVGKIPANLSYCSRLTVLCIEYNKLQGRIPLEFVSLSKLKDLSLAKNKLTGGIPPFLGNLTSLEVLSLAGNSFGRNIPD 192 (1008)
Q Consensus 113 ~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 192 (1008)
+|+...+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+|+ .+|..+..+++|++|+|++|++++..+.
T Consensus 75 ~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~ 153 (229)
T 3e6j_A 75 QLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHG 153 (229)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTT
T ss_pred CCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHH
Confidence 998666677888999999999999998777777888888888888888888 6777888888888888888888776667
Q ss_pred cccCCCCCcEEEecCCcccc
Q 045798 193 SLGQLKQLKILAIGGNNLSG 212 (1008)
Q Consensus 193 ~~~~l~~L~~L~L~~n~l~~ 212 (1008)
.|..+++|+.|+|++|.+..
T Consensus 154 ~~~~l~~L~~L~l~~N~~~c 173 (229)
T 3e6j_A 154 AFDRLSSLTHAYLFGNPWDC 173 (229)
T ss_dssp TTTTCTTCCEEECTTSCBCT
T ss_pred HHhCCCCCCEEEeeCCCccC
Confidence 77788888888888887763
No 355
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.81 E-value=6e-21 Score=232.39 Aligned_cols=235 Identities=23% Similarity=0.243 Sum_probs=130.7
Q ss_pred cCChhhHHHHHHHHHhhccCCCCCCCCCC-CCCCCCcccceEEcCCCCeEEEEeccccCCCCccCcCccCCccCCeee--
Q 045798 8 ALEDGDRAALQAFKSMIAHEPQGILNSWN-DSRHFCEWEGITCGRRHRRVTALDLMSKSLSGSLSPHLGNLSFLREIN-- 84 (1008)
Q Consensus 8 ~~~~~~~~~l~~~k~~~~~~~~~~~~~w~-~~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~~~l~~~l~~l~~L~~L~-- 84 (1008)
.....++++|.++..+........-.+|. ..+..+.|.++.+.. .+++.|+|.++.+.. .+..+.....|..+.
T Consensus 128 s~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~--~~~~~l~L~~n~~~~-~~~~~l~~l~Ls~~~i~ 204 (727)
T 4b8c_D 128 SLVDCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTATNSAVST--PLTPKIELFANGKDE-ANQALLQHKKLSQYSID 204 (727)
T ss_dssp ----CCCHHHHHHHHHHHHHHTTC--------------------------------------------------------
T ss_pred hccccchhhhhhhhhhcccccCcccCCCcCCCCccccCCCceecC--CccceEEeeCCCCCc-chhhHhhcCccCccccc
Confidence 34567889999999877544444445674 345677898888854 579999999988875 444443333333333
Q ss_pred ---ecCCCCCCCCCccccCCCCCCEEEccCCCCCCccCcccccCcCcceEeeeccccccCCCccccccCCCCeeeccccc
Q 045798 85 ---LSNNTIQGEIPPEFGRLFRLEALFLSNNSLVGKIPANLSYCSRLTVLCIEYNKLQGRIPLEFVSLSKLKDLSLAKNK 161 (1008)
Q Consensus 85 ---L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~ 161 (1008)
++.|.+. ..++.|..+.+|++|+|++|.+. .+|..+..+++|++|+|++|.|+ .+|..|+++++|++|+|++|+
T Consensus 205 ~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~ 281 (727)
T 4b8c_D 205 EDDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNR 281 (727)
T ss_dssp ------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSC
T ss_pred Ccccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCc
Confidence 2334444 56778888999999999999988 78888888999999999999998 788888999999999999999
Q ss_pred CCCCCCCCCccccccchhhcccccCCCCCCccccCCCCCcEEEecCCcccccCCccccCCCC-cceeccccccccccCCh
Q 045798 162 LTGGIPPFLGNLTSLEVLSLAGNSFGRNIPDSLGQLKQLKILAIGGNNLSGPIPPSIYNLSF-LVVFSVSHNQIHGSLPP 240 (1008)
Q Consensus 162 l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~-L~~L~ls~N~l~~~lp~ 240 (1008)
|+ .+|..|++|++|++|+|++|.++ .+|..|+.+++|+.|+|++|.+++.+|..+..+.. +..|+|++|.+++.+|.
T Consensus 282 l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~ 359 (727)
T 4b8c_D 282 LT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPH 359 (727)
T ss_dssp CS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_pred CC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcc
Confidence 98 77888999999999999999885 66777889999999999999998888877766533 23477888888876654
Q ss_pred hhhhcCCCCcEEEeccc
Q 045798 241 SLGLLLPNLKFFQIHHN 257 (1008)
Q Consensus 241 ~~~~~l~~L~~L~L~~N 257 (1008)
.|+.|++++|
T Consensus 360 -------~l~~l~l~~n 369 (727)
T 4b8c_D 360 -------ERRFIEINTD 369 (727)
T ss_dssp -------C---------
T ss_pred -------ccceeEeecc
Confidence 4556666666
No 356
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.80 E-value=1.8e-19 Score=186.22 Aligned_cols=149 Identities=25% Similarity=0.272 Sum_probs=115.8
Q ss_pred eccccCCCCccCcCccCCccCCeeeecCCCCCCCCCccccCCCCCCEEEccCCCCCCccCcccccCcCcceEeeeccccc
Q 045798 60 DLMSKSLSGSLSPHLGNLSFLREINLSNNTIQGEIPPEFGRLFRLEALFLSNNSLVGKIPANLSYCSRLTVLCIEYNKLQ 139 (1008)
Q Consensus 60 ~l~~~~l~~~l~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~ 139 (1008)
++++++++ .+|..+. +.|++|+|++|+|++..+..|..+++|++|+|++|++++..|..|..+++|++|+|++|+|+
T Consensus 17 ~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~ 93 (220)
T 2v9t_B 17 DCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT 93 (220)
T ss_dssp ECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCC
T ss_pred EcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCC
Confidence 33445555 5666554 67888999998888777778888888888888888888777888888888888888888888
Q ss_pred cCCCccccccCCCCeeecccccCCCCCCCCCccccccchhhcccccCCCCCCccccCCCCCcEEEecCCccc
Q 045798 140 GRIPLEFVSLSKLKDLSLAKNKLTGGIPPFLGNLTSLEVLSLAGNSFGRNIPDSLGQLKQLKILAIGGNNLS 211 (1008)
Q Consensus 140 ~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 211 (1008)
...+..|..+++|++|+|++|+|++..|..|.++++|++|+|++|++++..+..|..+++|+.|+|++|.+.
T Consensus 94 ~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 94 ELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEE
T ss_pred ccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcC
Confidence 666666777888888888888888777777777777888888887777766667777777777777777765
No 357
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.79 E-value=1.1e-19 Score=196.54 Aligned_cols=172 Identities=26% Similarity=0.365 Sum_probs=85.8
Q ss_pred CCCCCCEEEccCCCCCCccCcccccCcCcceEeeeccccccCCCccccccCCCCeeecccccCCCCCCCCCccccccchh
Q 045798 100 RLFRLEALFLSNNSLVGKIPANLSYCSRLTVLCIEYNKLQGRIPLEFVSLSKLKDLSLAKNKLTGGIPPFLGNLTSLEVL 179 (1008)
Q Consensus 100 ~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 179 (1008)
.+++|++|++++|.++. ++ .++.+++|++|+|++|++++..+ +.++++|++|++++|++++ ++ .+..+++|++|
T Consensus 44 ~l~~L~~L~l~~~~i~~-~~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L 117 (291)
T 1h6t_A 44 ELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSL 117 (291)
T ss_dssp HHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEE
T ss_pred hcCcccEEEccCCCccc-Ch-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEE
Confidence 44445555555554442 22 24444555555555555543322 4445555555555555542 22 24445555555
Q ss_pred hcccccCCCCCCccccCCCCCcEEEecCCcccccCCccccCCCCcceeccccccccccCChhhhhcCCCCcEEEeccccC
Q 045798 180 SLAGNSFGRNIPDSLGQLKQLKILAIGGNNLSGPIPPSIYNLSFLVVFSVSHNQIHGSLPPSLGLLLPNLKFFQIHHNFF 259 (1008)
Q Consensus 180 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~lp~~~~~~l~~L~~L~L~~N~l 259 (1008)
++++|++++. ..+..+++|+.|++++|.+++. ..+..+++|+.|++++|++++ ++. +..+++|++|+|++|.+
T Consensus 118 ~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~-~~~--l~~l~~L~~L~L~~N~i 190 (291)
T 1h6t_A 118 SLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISD-IVP--LAGLTKLQNLYLSKNHI 190 (291)
T ss_dssp ECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCC-CGG--GTTCTTCCEEECCSSCC
T ss_pred ECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCcccc-chh--hcCCCccCEEECCCCcC
Confidence 5555555332 2355555555555555555533 345555555555555555552 222 33355555555555555
Q ss_pred CCCCCcccccCCCCceeeccccccccc
Q 045798 260 SGSIPISLSNASKLEHIEIANNNFSGK 286 (1008)
Q Consensus 260 ~~~~p~~l~~l~~L~~L~L~~N~l~~~ 286 (1008)
++ ++ .+..+++|+.|++++|++...
T Consensus 191 ~~-l~-~l~~l~~L~~L~l~~n~i~~~ 215 (291)
T 1h6t_A 191 SD-LR-ALAGLKNLDVLELFSQECLNK 215 (291)
T ss_dssp CB-CG-GGTTCTTCSEEEEEEEEEECC
T ss_pred CC-Ch-hhccCCCCCEEECcCCcccCC
Confidence 53 22 356666666666666666543
No 358
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.78 E-value=1.9e-19 Score=213.46 Aligned_cols=197 Identities=23% Similarity=0.305 Sum_probs=131.8
Q ss_pred ccCCeeeecCCCCCCCCCccccCCCCCCEEEccCCCCCCccCcccccCcCcceEeeeccccccCCCccccccCCCCeeec
Q 045798 78 SFLREINLSNNTIQGEIPPEFGRLFRLEALFLSNNSLVGKIPANLSYCSRLTVLCIEYNKLQGRIPLEFVSLSKLKDLSL 157 (1008)
Q Consensus 78 ~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 157 (1008)
..+..+.++.+.+...++ +..|.+|++|++++|.+. .+| .++.+++|+.|+|++|+|++..| +..+++|+.|+|
T Consensus 21 ~~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~L 94 (605)
T 1m9s_A 21 AETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFL 94 (605)
T ss_dssp HHHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCC-CCT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEEC
T ss_pred HHHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCC-CCh-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEEC
Confidence 344555666666654333 456677777777777776 333 46677777777777777775444 667777777777
Q ss_pred ccccCCCCCCCCCccccccchhhcccccCCCCCCccccCCCCCcEEEecCCcccccCCccccCCCCcceecccccccccc
Q 045798 158 AKNKLTGGIPPFLGNLTSLEVLSLAGNSFGRNIPDSLGQLKQLKILAIGGNNLSGPIPPSIYNLSFLVVFSVSHNQIHGS 237 (1008)
Q Consensus 158 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~ 237 (1008)
++|+|++ ++ .+..+++|+.|+|++|++.+. ..+..+++|+.|+|++|.+++. ..+..+++|+.|+|++|.+.+.
T Consensus 95 s~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~ 168 (605)
T 1m9s_A 95 DENKIKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDI 168 (605)
T ss_dssp CSSCCCC-CT-TSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCC
T ss_pred cCCCCCC-Ch-hhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCc
Confidence 7777763 33 567777777777777777542 3477777777777777777754 5677777777777777777743
Q ss_pred CChhhhhcCCCCcEEEeccccCCCCCCcccccCCCCceeecccccccccccccc
Q 045798 238 LPPSLGLLLPNLKFFQIHHNFFSGSIPISLSNASKLEHIEIANNNFSGKLSVNF 291 (1008)
Q Consensus 238 lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~ 291 (1008)
.| +..+++|+.|+|++|.+++. ..+..+++|+.|+|++|++.+.....+
T Consensus 169 ~~---l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~p~~~~ 217 (605)
T 1m9s_A 169 VP---LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNKPINHQ 217 (605)
T ss_dssp GG---GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECCCCCCC
T ss_pred hh---hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCCccccc
Confidence 33 44467777777777777753 357777888888888888776544333
No 359
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.78 E-value=7.7e-19 Score=181.50 Aligned_cols=151 Identities=23% Similarity=0.287 Sum_probs=113.2
Q ss_pred EEeccccCCCCccCcCccCCccCCeeeecCCCCCCCCC-ccccCCCCCCEEEccCCCCCCccCcccccCcCcceEeeecc
Q 045798 58 ALDLMSKSLSGSLSPHLGNLSFLREINLSNNTIQGEIP-PEFGRLFRLEALFLSNNSLVGKIPANLSYCSRLTVLCIEYN 136 (1008)
Q Consensus 58 ~l~l~~~~l~~~l~~~l~~l~~L~~L~L~~n~~~~~~p-~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n 136 (1008)
.++++++.++ .+|..+.. .+++|+|++|++++..+ ..|..+++|++|+|++|+|++..+..|+.+++|++|+|++|
T Consensus 15 ~l~~s~n~l~-~iP~~~~~--~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 15 TVDCSNQKLN-KIPEHIPQ--YTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp EEECCSSCCS-SCCSCCCT--TCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeEeCCCCcc-cCccCCCC--CCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 4566667776 46665543 46788888888886644 45778888888888888888766777888888888888888
Q ss_pred ccccCCCccccccCCCCeeecccccCCCCCCCCCccccccchhhcccccCCCCCCccccCCCCCcEEEecCCccc
Q 045798 137 KLQGRIPLEFVSLSKLKDLSLAKNKLTGGIPPFLGNLTSLEVLSLAGNSFGRNIPDSLGQLKQLKILAIGGNNLS 211 (1008)
Q Consensus 137 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 211 (1008)
+|++..+..|..+++|++|+|++|+|++..|..|.++++|++|+|++|++++..|..|..+++|+.|+|++|.+.
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 166 (220)
T 2v70_A 92 RLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFN 166 (220)
T ss_dssp CCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEE
T ss_pred ccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCc
Confidence 888777777777888888888888887766777777777777777777777666777777777777777777665
No 360
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.78 E-value=2.8e-21 Score=227.84 Aligned_cols=204 Identities=19% Similarity=0.215 Sum_probs=107.0
Q ss_pred cccCCCcEEEecCCcCCccCChhhhhhcccceeeeeccccccCCCCCccccccccceEEecCccccCCcchhccCCCCCc
Q 045798 322 TNCSKLRVLSLGGNQFRGALPHSIANLSSQLQILILSSNQFYGSIPLGIGNLVDLYLLGMVENQFTGAIPKEMGKLQKLQ 401 (1008)
Q Consensus 322 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 401 (1008)
..+++|+.|+|++|+++ .+|..+..+. +|+.|++++|......|. .+..+.+.+..|..++.+++|+
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~-~L~~L~l~~n~~l~~l~~-----------ll~~~~~~~~~~~~l~~l~~L~ 412 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCK-ELQELEPENKWCLLTIIL-----------LMRALDPLLYEKETLQYFSTLK 412 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHH-HHHHHCTTCHHHHHHHHH-----------HHHHHCTGGGHHHHHHHHHHHH
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHH-HHHHhccccchhhhhHHH-----------HHHhcccccCCHHHHHHHHhcc
Confidence 45667777777777776 6777777775 477777766642101110 0111223345555666666666
Q ss_pred eEE-ccCCcccccccccccCCCCcceeeccccccccccCCCCcCCCcccEeecccccccCCcchhhhhhhhhhhhhcccC
Q 045798 402 GLD-FSGNHFSGEIPSSLGNLSSLYEVFFNNNNLSGVIPFSLGNLKRLAFLEMSGNELSGTIPEDIFNISYLSNSLNLAR 480 (1008)
Q Consensus 402 ~L~-Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~~~~~~~~~~~~L~L~~ 480 (1008)
.|+ ++.|.+. .|..+.+++|.+....+ ..|+.|+|++|+|++ +|. + .....++.|+|++
T Consensus 413 ~L~~l~~n~~~-----------~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~-lp~-~-~~l~~L~~L~Ls~ 472 (567)
T 1dce_A 413 AVDPMRAAYLD-----------DLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTV-LCH-L-EQLLLVTHLDLSH 472 (567)
T ss_dssp HHCGGGHHHHH-----------HHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSS-CCC-G-GGGTTCCEEECCS
T ss_pred cCcchhhcccc-----------hhhhhhhhcccccccCc------cCceEEEecCCCCCC-CcC-c-cccccCcEeecCc
Confidence 666 5555432 34444555555543222 125555555555542 332 1 1111222333333
Q ss_pred ccccCCCcccccccccccccccccccccCCCCcccccccccceeeccCcccccch-hhhhhccccccEEecCCCcccccc
Q 045798 481 NHLVGIIPPRIGNLRALRSFDVSNNDLSGEIPIELGHCSSLEEIYLAGNLFHGSI-PSFFNALKGVQKIDLSRNNLSGQI 559 (1008)
Q Consensus 481 N~l~~~~p~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~ls~N~l~~~~ 559 (1008)
|+|+ .+|..|+.+++|+.|+|++|.|++ +| .++.+++|++|+|++|+|++.+ |..|+.+++|+.|+|++|++++.+
T Consensus 473 N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 549 (567)
T 1dce_A 473 NRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEE 549 (567)
T ss_dssp SCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSS
T ss_pred cccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCc
Confidence 3333 445555556666666666666653 44 5566666666666666666554 566666666666666666666554
Q ss_pred cC
Q 045798 560 PI 561 (1008)
Q Consensus 560 p~ 561 (1008)
|.
T Consensus 550 ~~ 551 (567)
T 1dce_A 550 GI 551 (567)
T ss_dssp SC
T ss_pred cH
Confidence 43
No 361
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.78 E-value=3.4e-19 Score=199.47 Aligned_cols=128 Identities=23% Similarity=0.232 Sum_probs=81.3
Q ss_pred cEEEecCCcCCccCChhhhhhcccceeeeeccccccCCCCCccc-cccccceEEecCccccCCcchhccCCCCCceEEcc
Q 045798 328 RVLSLGGNQFRGALPHSIANLSSQLQILILSSNQFYGSIPLGIG-NLVDLYLLGMVENQFTGAIPKEMGKLQKLQGLDFS 406 (1008)
Q Consensus 328 ~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 406 (1008)
+.+++++|.++ .+|..+.. .++.|+|++|+|++..+..+. .+++|+.|+|++|+|++..+..|..+++|++|+|+
T Consensus 21 ~~l~c~~~~l~-~iP~~~~~---~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 96 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLPS---YTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLS 96 (361)
T ss_dssp TEEECCSSCCS-SCCSSCCT---TCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CEEEeCCCCcC-ccCccCCC---CCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECC
Confidence 56777777776 45654432 366777777777655555555 66666666666666666555666666666666666
Q ss_pred CCcccccccccccCCCCcceeeccccccccccCCCCcCCCcccEeeccccccc
Q 045798 407 GNHFSGEIPSSLGNLSSLYEVFFNNNNLSGVIPFSLGNLKRLAFLEMSGNELS 459 (1008)
Q Consensus 407 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 459 (1008)
+|+|++..+..|.++++|+.|+|++|+|.+..|..|.++++|+.|+|++|+|+
T Consensus 97 ~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~ 149 (361)
T 2xot_A 97 SNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQIS 149 (361)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC
T ss_pred CCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCC
Confidence 66666555555666666666666666666555666666666666666666665
No 362
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.78 E-value=4.5e-19 Score=191.89 Aligned_cols=173 Identities=27% Similarity=0.341 Sum_probs=134.9
Q ss_pred ccCCccCCeeeecCCCCCCCCCccccCCCCCCEEEccCCCCCCccCcccccCcCcceEeeeccccccCCCccccccCCCC
Q 045798 74 LGNLSFLREINLSNNTIQGEIPPEFGRLFRLEALFLSNNSLVGKIPANLSYCSRLTVLCIEYNKLQGRIPLEFVSLSKLK 153 (1008)
Q Consensus 74 l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~ 153 (1008)
+..+++|++|++++|.++. ++ .+..+++|++|+|++|++++..+ ++.+++|++|+|++|++++ +| .+..+++|+
T Consensus 42 ~~~l~~L~~L~l~~~~i~~-~~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~ 115 (291)
T 1h6t_A 42 QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLK 115 (291)
T ss_dssp HHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCC
T ss_pred hhhcCcccEEEccCCCccc-Ch-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCC
Confidence 3467778888888888873 33 47788888888888888885544 8888888888888888875 33 477888888
Q ss_pred eeecccccCCCCCCCCCccccccchhhcccccCCCCCCccccCCCCCcEEEecCCcccccCCccccCCCCcceecccccc
Q 045798 154 DLSLAKNKLTGGIPPFLGNLTSLEVLSLAGNSFGRNIPDSLGQLKQLKILAIGGNNLSGPIPPSIYNLSFLVVFSVSHNQ 233 (1008)
Q Consensus 154 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ls~N~ 233 (1008)
+|++++|++++. +.+..+++|++|++++|++++. ..+..+++|+.|++++|++++..+ +..+++|+.|++++|.
T Consensus 116 ~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~ 189 (291)
T 1h6t_A 116 SLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNH 189 (291)
T ss_dssp EEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSC
T ss_pred EEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCc
Confidence 888888888853 4677888888888888888654 568888888888888888886544 8888888888888888
Q ss_pred ccccCChhhhhcCCCCcEEEeccccCCC
Q 045798 234 IHGSLPPSLGLLLPNLKFFQIHHNFFSG 261 (1008)
Q Consensus 234 l~~~lp~~~~~~l~~L~~L~L~~N~l~~ 261 (1008)
++ .++. +..+++|+.|++++|.+..
T Consensus 190 i~-~l~~--l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 190 IS-DLRA--LAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp CC-BCGG--GTTCTTCSEEEEEEEEEEC
T ss_pred CC-CChh--hccCCCCCEEECcCCcccC
Confidence 87 4553 4558888899998888874
No 363
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.78 E-value=3.5e-19 Score=199.45 Aligned_cols=175 Identities=21% Similarity=0.204 Sum_probs=119.9
Q ss_pred EEeccccCCCCccCcCccCCccCCeeeecCCCCCCCCCcccc-CCCCCCEEEccCCCCCCccCcccccCcCcceEeeecc
Q 045798 58 ALDLMSKSLSGSLSPHLGNLSFLREINLSNNTIQGEIPPEFG-RLFRLEALFLSNNSLVGKIPANLSYCSRLTVLCIEYN 136 (1008)
Q Consensus 58 ~l~l~~~~l~~~l~~~l~~l~~L~~L~L~~n~~~~~~p~~~~-~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n 136 (1008)
.+++++++++ .+|..+. ..++.|+|++|+|++..+..|. .+++|++|+|++|+|++..+..|..+++|++|+|++|
T Consensus 22 ~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 98 (361)
T 2xot_A 22 ILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSN 98 (361)
T ss_dssp EEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCC
Confidence 4566667776 4666554 3478888888888876676776 7888888888888888666677888888888888888
Q ss_pred ccccCCCccccccCCCCeeecccccCCCCCCCCCccccccchhhcccccCCCCCCccc---cCCCCCcEEEecCCccccc
Q 045798 137 KLQGRIPLEFVSLSKLKDLSLAKNKLTGGIPPFLGNLTSLEVLSLAGNSFGRNIPDSL---GQLKQLKILAIGGNNLSGP 213 (1008)
Q Consensus 137 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~---~~l~~L~~L~L~~n~l~~~ 213 (1008)
+|++..+..|..+++|++|+|++|+|++..|..|.++++|+.|+|++|+++...+..| ..+++|+.|+|++|+|++.
T Consensus 99 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l 178 (361)
T 2xot_A 99 HLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKL 178 (361)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCC
T ss_pred cCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCcc
Confidence 8876666677777777777777777776666777777777777777777765444444 4566666666666666644
Q ss_pred CCccccCCCC--cceecccccccc
Q 045798 214 IPPSIYNLSF--LVVFSVSHNQIH 235 (1008)
Q Consensus 214 ~~~~~~~l~~--L~~L~ls~N~l~ 235 (1008)
.+..+..++. |+.|+|++|.+.
T Consensus 179 ~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 179 PLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp CHHHHHHSCHHHHTTEECCSSCEE
T ss_pred CHHHhhhccHhhcceEEecCCCcc
Confidence 4445555544 244555555443
No 364
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.78 E-value=1.2e-18 Score=180.18 Aligned_cols=152 Identities=21% Similarity=0.269 Sum_probs=131.6
Q ss_pred CeeeecCCCCCCCCCccccCCCCCCEEEccCCCCCCccCcccccCcCcceEeeeccccccCCCccccccCCCCeeecccc
Q 045798 81 REINLSNNTIQGEIPPEFGRLFRLEALFLSNNSLVGKIPANLSYCSRLTVLCIEYNKLQGRIPLEFVSLSKLKDLSLAKN 160 (1008)
Q Consensus 81 ~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n 160 (1008)
+.+++++++++ .+|..+. ++|++|+|++|+|++..+..|..+++|++|+|++|+|++..|..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 57889999998 6776664 78999999999999777778999999999999999999888899999999999999999
Q ss_pred cCCCCCCCCCccccccchhhcccccCCCCCCccccCCCCCcEEEecCCcccccCCccccCCCCcceecccccccc
Q 045798 161 KLTGGIPPFLGNLTSLEVLSLAGNSFGRNIPDSLGQLKQLKILAIGGNNLSGPIPPSIYNLSFLVVFSVSHNQIH 235 (1008)
Q Consensus 161 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~ 235 (1008)
+|+...+..|.++++|++|+|++|++++..+..|..+++|+.|+|++|.+++..+..|..+++|+.|+|++|.+.
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEE
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcC
Confidence 999666666788999999999999998888888999999999999999998877777888888888888888775
No 365
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.77 E-value=1.4e-18 Score=179.49 Aligned_cols=156 Identities=20% Similarity=0.213 Sum_probs=133.3
Q ss_pred CeeeecCCCCCCCCCccccCCCCCCEEEccCCCCCCccC-cccccCcCcceEeeeccccccCCCccccccCCCCeeeccc
Q 045798 81 REINLSNNTIQGEIPPEFGRLFRLEALFLSNNSLVGKIP-ANLSYCSRLTVLCIEYNKLQGRIPLEFVSLSKLKDLSLAK 159 (1008)
Q Consensus 81 ~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p-~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~ 159 (1008)
+++++++|+++ .+|..+. ..+++|+|++|++++..| ..|..+++|++|+|++|+|++..+..|.++++|++|+|++
T Consensus 14 ~~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 58999999998 5776654 456899999999996654 4588999999999999999987788899999999999999
Q ss_pred ccCCCCCCCCCccccccchhhcccccCCCCCCccccCCCCCcEEEecCCcccccCCccccCCCCcceeccccccccccCC
Q 045798 160 NKLTGGIPPFLGNLTSLEVLSLAGNSFGRNIPDSLGQLKQLKILAIGGNNLSGPIPPSIYNLSFLVVFSVSHNQIHGSLP 239 (1008)
Q Consensus 160 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~lp 239 (1008)
|++++..+..|.++++|++|+|++|++++..|..|..+++|++|+|++|++++..|..|..+++|+.|++++|.+....+
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 99997777778889999999999999988888889999999999999999998888888888888888888888875443
No 366
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.76 E-value=1.4e-18 Score=205.89 Aligned_cols=181 Identities=28% Similarity=0.337 Sum_probs=140.3
Q ss_pred ccCCccCCeeeecCCCCCCCCCccccCCCCCCEEEccCCCCCCccCcccccCcCcceEeeeccccccCCCccccccCCCC
Q 045798 74 LGNLSFLREINLSNNTIQGEIPPEFGRLFRLEALFLSNNSLVGKIPANLSYCSRLTVLCIEYNKLQGRIPLEFVSLSKLK 153 (1008)
Q Consensus 74 l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~ 153 (1008)
+..+++|+.|+|++|.+. .++ .|..+++|++|+|++|++++..| +..+++|++|+|++|.|++ +| .+..+++|+
T Consensus 39 ~~~L~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~ 112 (605)
T 1m9s_A 39 QNELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLK 112 (605)
T ss_dssp HHHHTTCCCCBCTTCCCC-CCT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCC
T ss_pred hhcCCCCCEEECcCCCCC-CCh-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCC
Confidence 456778888888888887 444 58888888888888888886554 8888888888888888885 33 678888888
Q ss_pred eeecccccCCCCCCCCCccccccchhhcccccCCCCCCccccCCCCCcEEEecCCcccccCCccccCCCCcceecccccc
Q 045798 154 DLSLAKNKLTGGIPPFLGNLTSLEVLSLAGNSFGRNIPDSLGQLKQLKILAIGGNNLSGPIPPSIYNLSFLVVFSVSHNQ 233 (1008)
Q Consensus 154 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ls~N~ 233 (1008)
+|+|++|++++ + +.+..+++|+.|+|++|++++. ..|..+++|+.|+|++|.+++..| +..+++|+.|+|++|+
T Consensus 113 ~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~ 186 (605)
T 1m9s_A 113 SLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNH 186 (605)
T ss_dssp EEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSC
T ss_pred EEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCC
Confidence 88888888884 3 4578888888888888888664 668888888888888888887655 8888888888888888
Q ss_pred ccccCChhhhhcCCCCcEEEeccccCCCCCCccccc
Q 045798 234 IHGSLPPSLGLLLPNLKFFQIHHNFFSGSIPISLSN 269 (1008)
Q Consensus 234 l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~ 269 (1008)
+. .+|. +..+++|+.|+|++|.+.+.....+..
T Consensus 187 i~-~l~~--l~~l~~L~~L~L~~N~l~~~p~~~~~~ 219 (605)
T 1m9s_A 187 IS-DLRA--LAGLKNLDVLELFSQECLNKPINHQSN 219 (605)
T ss_dssp CC-BCGG--GTTCTTCSEEECCSEEEECCCCCCCSS
T ss_pred CC-CChH--HccCCCCCEEEccCCcCcCCccccccc
Confidence 87 4442 445788888888888887543333333
No 367
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.76 E-value=2.8e-18 Score=178.53 Aligned_cols=136 Identities=20% Similarity=0.266 Sum_probs=67.0
Q ss_pred CCceEEccCCcccccccccccCCCCcceeeccccccccccCCCCcCCCcccEeecccccccCCcchhhhhhhhhhhhhcc
Q 045798 399 KLQGLDFSGNHFSGEIPSSLGNLSSLYEVFFNNNNLSGVIPFSLGNLKRLAFLEMSGNELSGTIPEDIFNISYLSNSLNL 478 (1008)
Q Consensus 399 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~~~~~~~~~~~~L~L 478 (1008)
+|++|+|++|+|++..|..|.++++|+.|+|++|+|....+..|..+++|+.|+|++|+|++
T Consensus 41 ~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~------------------ 102 (229)
T 3e6j_A 41 NAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTV------------------ 102 (229)
T ss_dssp TCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC------------------
T ss_pred CCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCc------------------
Confidence 34444444444443334444444444444444444443333444455555555555555541
Q ss_pred cCccccCCCcccccccccccccccccccccCCCCcccccccccceeeccCcccccchhhhhhccccccEEecCCCccccc
Q 045798 479 ARNHLVGIIPPRIGNLRALRSFDVSNNDLSGEIPIELGHCSSLEEIYLAGNLFHGSIPSFFNALKGVQKIDLSRNNLSGQ 558 (1008)
Q Consensus 479 ~~N~l~~~~p~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~ 558 (1008)
..+..|..+++|+.|+|++|.++ .+|..+..+++|++|+|++|+|++..+..|..+++|+.|+|++|++++.
T Consensus 103 -------l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 174 (229)
T 3e6j_A 103 -------LPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCE 174 (229)
T ss_dssp -------CCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTT
T ss_pred -------cChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCC
Confidence 12223344455555555555555 4555555555555555555555544445555566666666666666554
Q ss_pred cc
Q 045798 559 IP 560 (1008)
Q Consensus 559 ~p 560 (1008)
.+
T Consensus 175 c~ 176 (229)
T 3e6j_A 175 CR 176 (229)
T ss_dssp BG
T ss_pred cc
Confidence 43
No 368
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.76 E-value=3.4e-21 Score=227.16 Aligned_cols=207 Identities=20% Similarity=0.199 Sum_probs=137.4
Q ss_pred cCCCCCCEEEccCCCCCCccCcccccCcCcceEeeeccc-------------cccCCCccccccCCCCeee-cccccCCC
Q 045798 99 GRLFRLEALFLSNNSLVGKIPANLSYCSRLTVLCIEYNK-------------LQGRIPLEFVSLSKLKDLS-LAKNKLTG 164 (1008)
Q Consensus 99 ~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~-------------l~~~~p~~~~~l~~L~~L~-L~~n~l~~ 164 (1008)
..+++|+.|+|++|+++ .+|..+++|++|+.|++++|. +.+.+|..++.+++|+.|+ ++.|.+
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~-- 422 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYL-- 422 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHH--
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhccc--
Confidence 45777778888888877 777778888888888876664 4556677777788888877 566543
Q ss_pred CCCCCCccccccchhhcccccCCCCCCccccCCCCCcEEEecCCcccccCCccccCCCCcceeccccccccccCChhhhh
Q 045798 165 GIPPFLGNLTSLEVLSLAGNSFGRNIPDSLGQLKQLKILAIGGNNLSGPIPPSIYNLSFLVVFSVSHNQIHGSLPPSLGL 244 (1008)
Q Consensus 165 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~lp~~~~~ 244 (1008)
.+|+.+.+++|.++...+ ..|+.|+|++|.+++ +|. |..+++|+.|+|++|+++ .+|..+.
T Consensus 423 ---------~~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~- 483 (567)
T 1dce_A 423 ---------DDLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALA- 483 (567)
T ss_dssp ---------HHHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGG-
T ss_pred ---------chhhhhhhhcccccccCc------cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhh-
Confidence 355666666666543222 136677777777765 444 677777777777777776 6666544
Q ss_pred cCCCCcEEEeccccCCCCCCcccccCCCCceeecccccccccc-cccccCCCcccccccccccCCCCCCCcccccccccc
Q 045798 245 LLPNLKFFQIHHNFFSGSIPISLSNASKLEHIEIANNNFSGKL-SVNFGGMKNLSLLNLQFSNLGSGESDEMGFMNSLTN 323 (1008)
Q Consensus 245 ~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~ 323 (1008)
.+++|++|+|++|.+++ +| .+.++++|++|+|++|+|++.. |..|..+++|+.|+|++|+++...... ...+..
T Consensus 484 ~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~---~~l~~~ 558 (567)
T 1dce_A 484 ALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQ---ERLAEM 558 (567)
T ss_dssp GCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCT---THHHHH
T ss_pred cCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHH---HHHHHH
Confidence 36777777777777774 45 6677777777777777777665 667777777777777777766543321 112344
Q ss_pred cCCCcEEEe
Q 045798 324 CSKLRVLSL 332 (1008)
Q Consensus 324 l~~L~~L~L 332 (1008)
+++|+.|++
T Consensus 559 lp~L~~L~l 567 (567)
T 1dce_A 559 LPSVSSILT 567 (567)
T ss_dssp CTTCSEEEC
T ss_pred CcccCccCC
Confidence 677777764
No 369
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.75 E-value=6.2e-19 Score=214.67 Aligned_cols=200 Identities=24% Similarity=0.245 Sum_probs=117.5
Q ss_pred EEecCCcCCccCChhhhhhcccceeeeeccccccCCCCCccccccccceEEecCccccCCcchhccCCCCCceEEccCCc
Q 045798 330 LSLGGNQFRGALPHSIANLSSQLQILILSSNQFYGSIPLGIGNLVDLYLLGMVENQFTGAIPKEMGKLQKLQGLDFSGNH 409 (1008)
Q Consensus 330 L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~ 409 (1008)
++++.|++. ..+..+..+. .|+.|+|++|.+. .+|..+..+++|++|+|++|.|+ .+|..|..+++|++|+|++|.
T Consensus 206 ~~~~~n~~~-~~~~~~~~l~-~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~ 281 (727)
T 4b8c_D 206 DDDIENRMV-MPKDSKYDDQ-LWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNR 281 (727)
T ss_dssp -----------------CCC-CCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSC
T ss_pred cccccccee-cChhhhccCC-CCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCc
Confidence 344555555 4555666654 4888888888887 67777778888888888888888 788888999999999999999
Q ss_pred ccccccccccCCCCcceeeccccccccccCCCCcCCCcccEeecccccccCCcchhhhhhhhhhhhhcccCccccCCCcc
Q 045798 410 FSGEIPSSLGNLSSLYEVFFNNNNLSGVIPFSLGNLKRLAFLEMSGNELSGTIPEDIFNISYLSNSLNLARNHLVGIIPP 489 (1008)
Q Consensus 410 l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~~~~~~~~~~~~L~L~~N~l~~~~p~ 489 (1008)
|+ .+|..|.+|++|++|+|++|.|+ .+|..|+++++|+.|+|++|+|++.+|..+.........|+|++|.+++.+|.
T Consensus 282 l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~ 359 (727)
T 4b8c_D 282 LT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPH 359 (727)
T ss_dssp CS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_pred CC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcc
Confidence 98 77888999999999999999997 67888999999999999999999888877766555545577777777777665
Q ss_pred cccccccccccccccccccCCCCcccccccccceeeccCcccccchhhhhhccccccEEecCCCcccc
Q 045798 490 RIGNLRALRSFDVSNNDLSGEIPIELGHCSSLEEIYLAGNLFHGSIPSFFNALKGVQKIDLSRNNLSG 557 (1008)
Q Consensus 490 ~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~ 557 (1008)
. |+.|++++|... -.. .+.|.+.++..+..+..+....+++|-+.+
T Consensus 360 ~------l~~l~l~~n~~~---~~~-------------~~~l~~~~~~~~~~l~~~~~~~ls~Nil~~ 405 (727)
T 4b8c_D 360 E------RRFIEINTDGEP---QRE-------------YDSLQQSTEHLATDLAKRTFTVLSYNTLCQ 405 (727)
T ss_dssp C---------------------------------------------------------------CCCG
T ss_pred c------cceeEeeccccc---ccc-------------cCCccccccchhhcccccceeeeecccccc
Confidence 3 455666666100 000 112333334444555566666666666653
No 370
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.74 E-value=1.8e-18 Score=183.49 Aligned_cols=137 Identities=19% Similarity=0.166 Sum_probs=105.9
Q ss_pred CCCCceEeeccCeeEEEEEEcCCCeE--EEEEEeccccch------------------------hhHHHHHHHHHHhhcC
Q 045798 686 FSSTHLIGVGSFGCVYKGALDEDGIV--VAIKVINLQCEG------------------------ASKSFMAECKALKNIR 739 (1008)
Q Consensus 686 y~~~~~lg~G~~g~Vy~~~~~~~~~~--vavK~~~~~~~~------------------------~~~~~~~E~~~l~~l~ 739 (1008)
|.+.+.||+|+||.||+|.+..+|+. ||||+++..... ....+.+|++++.++.
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 66789999999999999999668888 999997543111 1136889999999998
Q ss_pred CCCc--eeeeeccccccccCCceEEEEEeccCC-C----ChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHH
Q 045798 740 HRNL--VKVITSCSSIDFQGNDFKAIVYEYMPN-G----SLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYL 812 (1008)
Q Consensus 740 h~ni--v~~~~~~~~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~L 812 (1008)
|+++ ..+++. +..++||||+.+ | +|.++.. ..++..+..++.|++.||+||
T Consensus 129 ~~~i~~p~~~~~---------~~~~lVmE~~g~~g~~~~~L~~~~~-------------~~~~~~~~~i~~qi~~~l~~l 186 (258)
T 1zth_A 129 EAGVSVPQPYTY---------MKNVLLMEFIGEDELPAPTLVELGR-------------ELKELDVEGIFNDVVENVKRL 186 (258)
T ss_dssp HTTCCCCCEEEE---------ETTEEEEECCEETTEECCBHHHHGG-------------GGGGSCHHHHHHHHHHHHHHH
T ss_pred hCCCCCCeEEEc---------CCCEEEEEecCCCCCccccHHHHhh-------------ccChHHHHHHHHHHHHHHHHH
Confidence 8754 333332 236899999942 4 5555432 122446778999999999999
Q ss_pred h-hCCCCCceeccCCCCCeeecCCCCeEEcccCccccc
Q 045798 813 H-HHCQEPILHCDLKPSNILLDNDLSGHIGDFGLARFH 849 (1008)
Q Consensus 813 H-~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~ 849 (1008)
| +. +|+||||||+|||++. .++|+|||+|...
T Consensus 187 H~~~---givHrDlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 187 YQEA---ELVHADLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp HHTS---CEECSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred HHHC---CEEeCCCCHHHEEEcC--cEEEEECcccccC
Confidence 9 87 9999999999999998 9999999999754
No 371
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.74 E-value=4.6e-18 Score=172.61 Aligned_cols=156 Identities=15% Similarity=0.198 Sum_probs=103.8
Q ss_pred cccccccceEEecCccccCCcchhccCCCCCceEEccCCcccccccccccCCCCcceeeccccccccccCCCCcCCCccc
Q 045798 370 IGNLVDLYLLGMVENQFTGAIPKEMGKLQKLQGLDFSGNHFSGEIPSSLGNLSSLYEVFFNNNNLSGVIPFSLGNLKRLA 449 (1008)
Q Consensus 370 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~ 449 (1008)
...+++|+.|++++|.++ .+| .+..+++|++|++++|.+. .+..+..+++|++|++++|.+++..|..|+.+++|+
T Consensus 40 ~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~ 115 (197)
T 4ezg_A 40 EAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLT 115 (197)
T ss_dssp HHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCC
T ss_pred hhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCC
Confidence 356667777777777776 444 5677777777777777664 234567777777777777777766677777777777
Q ss_pred EeecccccccCCcchhhhhhhhhhhhhcccCccccCCCcccccccccccccccccccccCCCCcccccccccceeeccCc
Q 045798 450 FLEMSGNELSGTIPEDIFNISYLSNSLNLARNHLVGIIPPRIGNLRALRSFDVSNNDLSGEIPIELGHCSSLEEIYLAGN 529 (1008)
Q Consensus 450 ~L~Ls~N~l~~~lp~~~~~~~~~~~~L~L~~N~l~~~~p~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~L~~N 529 (1008)
+|+|++|++++ ..|..++.+++|+.|++++|.+.+.+| .+..+++|++|++++|
T Consensus 116 ~L~Ls~n~i~~-------------------------~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~l~~n 169 (197)
T 4ezg_A 116 LLDISHSAHDD-------------------------SILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFD 169 (197)
T ss_dssp EEECCSSBCBG-------------------------GGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEECTTB
T ss_pred EEEecCCccCc-------------------------HhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEECCCC
Confidence 77777777763 334556666777777777776222555 5677777777777777
Q ss_pred ccccchhhhhhccccccEEecCCCcccc
Q 045798 530 LFHGSIPSFFNALKGVQKIDLSRNNLSG 557 (1008)
Q Consensus 530 ~l~~~~p~~~~~l~~L~~L~ls~N~l~~ 557 (1008)
++++ ++ .+..+++|+.|++++|++.+
T Consensus 170 ~i~~-~~-~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 170 GVHD-YR-GIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp CCCC-CT-TGGGCSSCCEEEECBC----
T ss_pred CCcC-hH-HhccCCCCCEEEeeCcccCC
Confidence 7774 33 56677777777777777653
No 372
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.73 E-value=3e-18 Score=182.26 Aligned_cols=169 Identities=22% Similarity=0.298 Sum_probs=108.4
Q ss_pred CCccCCeeeecCCCCCCCCCccccCCCCCCEEEccCCCCCCccCcccccCcCcceEeeeccccccCCCccccccCCCCee
Q 045798 76 NLSFLREINLSNNTIQGEIPPEFGRLFRLEALFLSNNSLVGKIPANLSYCSRLTVLCIEYNKLQGRIPLEFVSLSKLKDL 155 (1008)
Q Consensus 76 ~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L 155 (1008)
.+.++..+++++|.+++ ++ .+..+++|++|++++|+++ .+| .++.+++|++|+|++|+|++..+ +..+++|++|
T Consensus 17 ~l~~l~~l~l~~~~i~~-~~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTD-LV-SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTS-EE-CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCccc-cc-chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 45566677777777763 33 5677777777777777777 445 57777777777777777775444 7777777777
Q ss_pred ecccccCCCCCCCCCccccccchhhcccccCCCCCCccccCCCCCcEEEecCCcccccCCccccCCCCcceecccccccc
Q 045798 156 SLAKNKLTGGIPPFLGNLTSLEVLSLAGNSFGRNIPDSLGQLKQLKILAIGGNNLSGPIPPSIYNLSFLVVFSVSHNQIH 235 (1008)
Q Consensus 156 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~ 235 (1008)
+|++|++++ +|... . ++|++|+|++|++++. ..+..+++|+.|++++|++++. + .+..+++|+.|++++|+++
T Consensus 91 ~L~~N~l~~-l~~~~-~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~ 163 (263)
T 1xeu_A 91 SVNRNRLKN-LNGIP-S-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEIT 163 (263)
T ss_dssp ECCSSCCSC-CTTCC-C-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCC
T ss_pred ECCCCccCC-cCccc-c-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCc
Confidence 777777774 33322 2 6777777777777543 2466777777777777777643 2 5666666666666666665
Q ss_pred ccCChhhhhcCCCCcEEEeccccCC
Q 045798 236 GSLPPSLGLLLPNLKFFQIHHNFFS 260 (1008)
Q Consensus 236 ~~lp~~~~~~l~~L~~L~L~~N~l~ 260 (1008)
+. ..+..+++|+.|++++|.+.
T Consensus 164 ~~---~~l~~l~~L~~L~l~~N~~~ 185 (263)
T 1xeu_A 164 NT---GGLTRLKKVNWIDLTGQKCV 185 (263)
T ss_dssp BC---TTSTTCCCCCEEEEEEEEEE
T ss_pred ch---HHhccCCCCCEEeCCCCccc
Confidence 32 22233555555555555555
No 373
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.73 E-value=2.4e-18 Score=183.09 Aligned_cols=168 Identities=24% Similarity=0.263 Sum_probs=99.8
Q ss_pred cceeeeeccccccCCCCCccccccccceEEecCccccCCcchhccCCCCCceEEccCCcccccccccccCCCCcceeecc
Q 045798 351 QLQILILSSNQFYGSIPLGIGNLVDLYLLGMVENQFTGAIPKEMGKLQKLQGLDFSGNHFSGEIPSSLGNLSSLYEVFFN 430 (1008)
Q Consensus 351 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 430 (1008)
.+..+++++|.+++ ++ .+..+++|+.|++++|+++. ++ .+..+++|+.|+|++|++++..+ +..+++|+.|+++
T Consensus 20 ~l~~l~l~~~~i~~-~~-~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~ 93 (263)
T 1xeu_A 20 NAVKQNLGKQSVTD-LV-SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVN 93 (263)
T ss_dssp HHHHHHHTCSCTTS-EE-CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECC
T ss_pred HHHHHHhcCCCccc-cc-chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECC
Confidence 36667777777763 33 45666667777777766663 33 56666666666666666664333 5666666666666
Q ss_pred ccccccccCCCCcCCCcccEeecccccccCCcchhhhhhhhhhhhhcccCccccCCCcccccccccccccccccccccCC
Q 045798 431 NNNLSGVIPFSLGNLKRLAFLEMSGNELSGTIPEDIFNISYLSNSLNLARNHLVGIIPPRIGNLRALRSFDVSNNDLSGE 510 (1008)
Q Consensus 431 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~~~~~~~~~~~~L~L~~N~l~~~~p~~~~~l~~L~~Ldls~N~l~~~ 510 (1008)
+|++++. |.. .. ++|+.|+|++|++++ ++ .++.+++|+.|+|++|++++
T Consensus 94 ~N~l~~l-~~~-~~-~~L~~L~L~~N~l~~--------------------------~~-~l~~l~~L~~L~Ls~N~i~~- 142 (263)
T 1xeu_A 94 RNRLKNL-NGI-PS-ACLSRLFLDNNELRD--------------------------TD-SLIHLKNLEILSIRNNKLKS- 142 (263)
T ss_dssp SSCCSCC-TTC-CC-SSCCEEECCSSCCSB--------------------------SG-GGTTCTTCCEEECTTSCCCB-
T ss_pred CCccCCc-Ccc-cc-CcccEEEccCCccCC--------------------------Ch-hhcCcccccEEECCCCcCCC-
Confidence 6666542 221 11 555666665555541 12 35556666666666666663
Q ss_pred CCcccccccccceeeccCcccccchhhhhhccccccEEecCCCccccc
Q 045798 511 IPIELGHCSSLEEIYLAGNLFHGSIPSFFNALKGVQKIDLSRNNLSGQ 558 (1008)
Q Consensus 511 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~ 558 (1008)
+| .++.+++|++|+|++|++++. ..+..+++|+.|+|++|++++.
T Consensus 143 ~~-~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 143 IV-MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp CG-GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred Ch-HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 33 466666666666666666644 4556666666666666666544
No 374
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.73 E-value=8.5e-18 Score=169.65 Aligned_cols=132 Identities=21% Similarity=0.339 Sum_probs=79.8
Q ss_pred ceEEccCCcccccccccccCCCCcceeeccccccccccCC-CCcCCCcccEeecccccccCCcchhhhhhhhhhhhhccc
Q 045798 401 QGLDFSGNHFSGEIPSSLGNLSSLYEVFFNNNNLSGVIPF-SLGNLKRLAFLEMSGNELSGTIPEDIFNISYLSNSLNLA 479 (1008)
Q Consensus 401 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~lp~~~~~~~~~~~~L~L~ 479 (1008)
+++++++|.++ .+|..+.. +|++|++++|.|++..+. .|..+++|++|+|++|++++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~------------------- 68 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTG------------------- 68 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCC-------------------
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCC-------------------
Confidence 45555555554 44443332 555555555555544443 35566666666666666553
Q ss_pred CccccCCCcccccccccccccccccccccCCCCcccccccccceeeccCcccccchhhhhhccccccEEecCCCcccccc
Q 045798 480 RNHLVGIIPPRIGNLRALRSFDVSNNDLSGEIPIELGHCSSLEEIYLAGNLFHGSIPSFFNALKGVQKIDLSRNNLSGQI 559 (1008)
Q Consensus 480 ~N~l~~~~p~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~ 559 (1008)
..|..|..+++|+.|+|++|++++..|..|..+++|++|+|++|+|++.+|..|..+++|+.|+|++|++++..
T Consensus 69 ------~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 142 (192)
T 1w8a_A 69 ------IEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNC 142 (192)
T ss_dssp ------BCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSG
T ss_pred ------cCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcC
Confidence 34455566666666666666666555555666666777777777777666667777777777777777777655
Q ss_pred c
Q 045798 560 P 560 (1008)
Q Consensus 560 p 560 (1008)
+
T Consensus 143 ~ 143 (192)
T 1w8a_A 143 H 143 (192)
T ss_dssp G
T ss_pred c
Confidence 4
No 375
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.73 E-value=5.2e-18 Score=172.23 Aligned_cols=151 Identities=18% Similarity=0.251 Sum_probs=62.3
Q ss_pred CCCCCEEEccCCCCCCccCcccccCcCcceEeeeccccccCCCccccccCCCCeeecccccCCCCCCCCCccccccchhh
Q 045798 101 LFRLEALFLSNNSLVGKIPANLSYCSRLTVLCIEYNKLQGRIPLEFVSLSKLKDLSLAKNKLTGGIPPFLGNLTSLEVLS 180 (1008)
Q Consensus 101 l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 180 (1008)
+++|++|++++|.++ .+| .+..+++|++|++++|.++. +..+..+++|++|++++|++++..+..++.+++|++|+
T Consensus 43 l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~ 118 (197)
T 4ezg_A 43 MNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLD 118 (197)
T ss_dssp HHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEE
T ss_pred cCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEE
Confidence 333444444444433 222 23334444444444443321 12333444444444444444433344444444444444
Q ss_pred cccccCCCCCCccccCCCCCcEEEecCCc-ccccCCccccCCCCcceeccccccccccCChhhhhcCCCCcEEEeccccC
Q 045798 181 LAGNSFGRNIPDSLGQLKQLKILAIGGNN-LSGPIPPSIYNLSFLVVFSVSHNQIHGSLPPSLGLLLPNLKFFQIHHNFF 259 (1008)
Q Consensus 181 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~-l~~~~~~~~~~l~~L~~L~ls~N~l~~~lp~~~~~~l~~L~~L~L~~N~l 259 (1008)
+++|++++..+..|+.+++|++|++++|. ++. ++ .+..+++|+.|++++|+++ .++ .+..+++|++|++++|++
T Consensus 119 Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~-~~-~l~~l~~L~~L~l~~n~i~-~~~--~l~~l~~L~~L~l~~N~i 193 (197)
T 4ezg_A 119 ISHSAHDDSILTKINTLPKVNSIDLSYNGAITD-IM-PLKTLPELKSLNIQFDGVH-DYR--GIEDFPKLNQLYAFSQTI 193 (197)
T ss_dssp CCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCC-CG-GGGGCSSCCEEECTTBCCC-CCT--TGGGCSSCCEEEECBC--
T ss_pred ecCCccCcHhHHHHhhCCCCCEEEccCCCCccc-cH-hhcCCCCCCEEECCCCCCc-ChH--HhccCCCCCEEEeeCccc
Confidence 44444443344444444444444444444 332 22 3444444455555555444 232 222345555555555554
Q ss_pred C
Q 045798 260 S 260 (1008)
Q Consensus 260 ~ 260 (1008)
.
T Consensus 194 ~ 194 (197)
T 4ezg_A 194 G 194 (197)
T ss_dssp -
T ss_pred C
Confidence 3
No 376
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.69 E-value=1.2e-16 Score=161.10 Aligned_cols=133 Identities=22% Similarity=0.280 Sum_probs=121.1
Q ss_pred cEEEecCCcCCccCChhhhhhcccceeeeeccccccCCCCC-ccccccccceEEecCccccCCcchhccCCCCCceEEcc
Q 045798 328 RVLSLGGNQFRGALPHSIANLSSQLQILILSSNQFYGSIPL-GIGNLVDLYLLGMVENQFTGAIPKEMGKLQKLQGLDFS 406 (1008)
Q Consensus 328 ~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 406 (1008)
+.+++++|+++ .+|..+.. .|++|+|++|++++..+. .+..+++|++|+|++|+|++..|..|..+++|++|+|+
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~---~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 86 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL---HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLG 86 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT---TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CEEEcCCCCcC-cCccCCCC---CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECC
Confidence 68899999997 77876544 699999999999966664 48999999999999999999999999999999999999
Q ss_pred CCcccccccccccCCCCcceeeccccccccccCCCCcCCCcccEeecccccccCCcch
Q 045798 407 GNHFSGEIPSSLGNLSSLYEVFFNNNNLSGVIPFSLGNLKRLAFLEMSGNELSGTIPE 464 (1008)
Q Consensus 407 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~ 464 (1008)
+|+|++..+..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|.+++..+.
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l 144 (192)
T 1w8a_A 87 ENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHL 144 (192)
T ss_dssp SCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGG
T ss_pred CCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcc
Confidence 9999988888899999999999999999999999999999999999999999987653
No 377
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.67 E-value=5.6e-17 Score=179.13 Aligned_cols=287 Identities=14% Similarity=0.086 Sum_probs=135.9
Q ss_pred cCCCCeeecccccCCCCCCCCCcc-ccccchhhcccccCC--CCCCccccCCCCCcEEEecCCcccccCCccccC-----
Q 045798 149 LSKLKDLSLAKNKLTGGIPPFLGN-LTSLEVLSLAGNSFG--RNIPDSLGQLKQLKILAIGGNNLSGPIPPSIYN----- 220 (1008)
Q Consensus 149 l~~L~~L~L~~n~l~~~~~~~~~~-l~~L~~L~L~~n~l~--~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~----- 220 (1008)
+.++++|.++++- .......+.. +++|+.|+|++|++. ......+ +.++.+.+..|.| ...+|.+
T Consensus 24 ~~~l~~L~l~g~i-~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~~~---~~~~~~~~~~~~I---~~~aF~~~~~~~ 96 (329)
T 3sb4_A 24 ANSITHLTLTGKL-NAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAGTY---PNGKFYIYMANFV---PAYAFSNVVNGV 96 (329)
T ss_dssp HHHCSEEEEEEEE-CHHHHHHHHHSCTTCCEEEEEEEEECCEEESSSSS---GGGCCEEECTTEE---CTTTTEEEETTE
T ss_pred hCceeEEEEeccc-cHHHHHHHHHhhccCeEEecCcceeEEecCccccc---ccccccccccccc---CHHHhccccccc
Confidence 5677778777642 1111112222 556777777777764 1111112 2234444444432 2345555
Q ss_pred ---CCCcceeccccccccccCChhhhhcCCCCcEEEeccccCCCCCCcccccCCCCceeeccccc----ccccccccccC
Q 045798 221 ---LSFLVVFSVSHNQIHGSLPPSLGLLLPNLKFFQIHHNFFSGSIPISLSNASKLEHIEIANNN----FSGKLSVNFGG 293 (1008)
Q Consensus 221 ---l~~L~~L~ls~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~----l~~~~~~~~~~ 293 (1008)
+++|+.|+|++ .++ .|+...|..+++|+.|++++|.+....+.+|..+.++..+.+..+. ........|.+
T Consensus 97 ~~g~~~L~~l~L~~-~i~-~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~ 174 (329)
T 3sb4_A 97 TKGKQTLEKVILSE-KIK-NIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIE 174 (329)
T ss_dssp EEECTTCCC-CBCT-TCC-EECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEE
T ss_pred ccccCCCcEEECCc-ccc-chhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcccccccccccc
Confidence 66666666666 555 5666666666666666666666655555556555555555544421 12222333333
Q ss_pred CCccc-ccccccccCCCCCCCcccccccccccCCCcEEEecCCcCCccCChhhhhhcccceeeeeccccccCCCCCcccc
Q 045798 294 MKNLS-LLNLQFSNLGSGESDEMGFMNSLTNCSKLRVLSLGGNQFRGALPHSIANLSSQLQILILSSNQFYGSIPLGIGN 372 (1008)
Q Consensus 294 l~~L~-~L~L~~n~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~ 372 (1008)
+.+|+ .+.+... ..+. ......-....++..+.+.++-.. .....+.....+|+.|+|++|+++...+..|.+
T Consensus 175 ~~~L~~~i~~~~~--~~l~---~~~~~~~~~~~~~~~l~~~~~l~~-~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~ 248 (329)
T 3sb4_A 175 GEPLETTIQVGAM--GKLE---DEIMKAGLQPRDINFLTIEGKLDN-ADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQ 248 (329)
T ss_dssp SCCCEEEEEECTT--CCHH---HHHHHTTCCGGGCSEEEEEECCCH-HHHHHHHHHCTTCCEEECTTBCCCEECTTTTTT
T ss_pred ccccceeEEecCC--CcHH---HHHhhcccCccccceEEEeeeecH-HHHHHHHHhcCCCeEEECCCCCcceecHhhhhC
Confidence 33333 1111100 0000 000000011233344444433111 111112221234666666665555444445555
Q ss_pred ccccceEEecCccccCCcchhccCCCCCc-eEEccCCcccccccccccCCCCcceeeccccccccccCCCCcCCCcccEe
Q 045798 373 LVDLYLLGMVENQFTGAIPKEMGKLQKLQ-GLDFSGNHFSGEIPSSLGNLSSLYEVFFNNNNLSGVIPFSLGNLKRLAFL 451 (1008)
Q Consensus 373 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L 451 (1008)
+.+|+.|+|.+| ++.+.+..|.++++|+ .|+|.+ .++...+..|.++++|+.|++++|.+..+.+.+|.++++|+.|
T Consensus 249 ~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~l 326 (329)
T 3sb4_A 249 KKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLI 326 (329)
T ss_dssp CTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEE
T ss_pred CCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhh
Confidence 666666666555 5544555555566665 666655 4443444555556666666665555555555555555555555
Q ss_pred e
Q 045798 452 E 452 (1008)
Q Consensus 452 ~ 452 (1008)
+
T Consensus 327 y 327 (329)
T 3sb4_A 327 Y 327 (329)
T ss_dssp E
T ss_pred c
Confidence 4
No 378
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.67 E-value=1.8e-17 Score=183.10 Aligned_cols=293 Identities=13% Similarity=0.110 Sum_probs=151.2
Q ss_pred CccCcCccC--CccCCeeeecCCCCCCCCCccccC-CCCCCEEEccCCCCC--CccCcccccCcCcceEeeeccccccCC
Q 045798 68 GSLSPHLGN--LSFLREINLSNNTIQGEIPPEFGR-LFRLEALFLSNNSLV--GKIPANLSYCSRLTVLCIEYNKLQGRI 142 (1008)
Q Consensus 68 ~~l~~~l~~--l~~L~~L~L~~n~~~~~~p~~~~~-l~~L~~L~Ls~n~l~--~~~p~~l~~l~~L~~L~Ls~n~l~~~~ 142 (1008)
|.+...+.. +.++++|.++++ +....-..+.. +++|++|||++|++. ...+. .++.+..+.+..|.| .
T Consensus 13 g~l~~~l~~~~~~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~---~~~~~~~~~~~~~~I---~ 85 (329)
T 3sb4_A 13 GTLISMMTEEEANSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAG---TYPNGKFYIYMANFV---P 85 (329)
T ss_dssp TCGGGGSCHHHHHHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEEESSS---SSGGGCCEEECTTEE---C
T ss_pred CcHHhhccchhhCceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEecCccc---ccccccccccccccc---C
Confidence 344444433 667788887763 22111112233 667777777777776 22222 222244445544432 2
Q ss_pred Cccccc--------cCCCCeeecccccCCCCCCCCCccccccchhhcccccCCCCCCccccCCCCCcEEEecCCc----c
Q 045798 143 PLEFVS--------LSKLKDLSLAKNKLTGGIPPFLGNLTSLEVLSLAGNSFGRNIPDSLGQLKQLKILAIGGNN----L 210 (1008)
Q Consensus 143 p~~~~~--------l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~----l 210 (1008)
+.+|.+ +++|+.|+|.+ .++.+.+..|.++++|+.|++++|.+....+.+|..+.++..+.+..+. .
T Consensus 86 ~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~ 164 (329)
T 3sb4_A 86 AYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFK 164 (329)
T ss_dssp TTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTS
T ss_pred HHHhcccccccccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcc
Confidence 345555 67777777766 6665555667777777777777776666666667666666655555422 1
Q ss_pred cccCCccccCCCCcc-eeccccccccccCChhhhhc---CCCCcEEEeccccCCCCCCccc-ccCCCCceeecccccccc
Q 045798 211 SGPIPPSIYNLSFLV-VFSVSHNQIHGSLPPSLGLL---LPNLKFFQIHHNFFSGSIPISL-SNASKLEHIEIANNNFSG 285 (1008)
Q Consensus 211 ~~~~~~~~~~l~~L~-~L~ls~N~l~~~lp~~~~~~---l~~L~~L~L~~N~l~~~~p~~l-~~l~~L~~L~L~~N~l~~ 285 (1008)
......+|.++..|+ .+.+... +.++..++.. ..+++.+.+.++-.. .....+ ..+++|+.|+|++|+++.
T Consensus 165 ~~i~~~~f~~~~~L~~~i~~~~~---~~l~~~~~~~~~~~~~~~~l~~~~~l~~-~~~~~l~~~~~~L~~l~L~~n~i~~ 240 (329)
T 3sb4_A 165 NRWEHFAFIEGEPLETTIQVGAM---GKLEDEIMKAGLQPRDINFLTIEGKLDN-ADFKLIRDYMPNLVSLDISKTNATT 240 (329)
T ss_dssp TTTTTSCEEESCCCEEEEEECTT---CCHHHHHHHTTCCGGGCSEEEEEECCCH-HHHHHHHHHCTTCCEEECTTBCCCE
T ss_pred ccccccccccccccceeEEecCC---CcHHHHHhhcccCccccceEEEeeeecH-HHHHHHHHhcCCCeEEECCCCCcce
Confidence 223344455555555 3333322 1233333321 334455555544221 111111 125566666666666666
Q ss_pred cccccccCCCcccccccccccCCCCCCCcccccccccccCCCcEEEecCCcCCccCChhhhhhcccceeeeeccccccCC
Q 045798 286 KLSVNFGGMKNLSLLNLQFSNLGSGESDEMGFMNSLTNCSKLRVLSLGGNQFRGALPHSIANLSSQLQILILSSNQFYGS 365 (1008)
Q Consensus 286 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~ 365 (1008)
+...+|.++.+|+.++|+.| +..++.. +|.++++|+ ..+++.+ .++..
T Consensus 241 I~~~aF~~~~~L~~l~l~~n-i~~I~~~------aF~~~~~L~------------------------~~l~l~~-~l~~I 288 (329)
T 3sb4_A 241 IPDFTFAQKKYLLKIKLPHN-LKTIGQR------VFSNCGRLA------------------------GTLELPA-SVTAI 288 (329)
T ss_dssp ECTTTTTTCTTCCEEECCTT-CCEECTT------TTTTCTTCC------------------------EEEEECT-TCCEE
T ss_pred ecHhhhhCCCCCCEEECCcc-cceehHH------HhhCChhcc------------------------EEEEEcc-cceEE
Confidence 55555555555555555544 3333222 344444444 0444444 33333
Q ss_pred CCCccccccccceEEecCccccCCcchhccCCCCCceEE
Q 045798 366 IPLGIGNLVDLYLLGMVENQFTGAIPKEMGKLQKLQGLD 404 (1008)
Q Consensus 366 ~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 404 (1008)
-+..|.++++|+.+++++|+++.+.+..|.++++|+.|+
T Consensus 289 ~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 289 EFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp CTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEE
T ss_pred chhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhc
Confidence 445566666666666666666656666677777777665
No 379
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.64 E-value=3.1e-16 Score=154.69 Aligned_cols=84 Identities=30% Similarity=0.366 Sum_probs=42.8
Q ss_pred ccCCeeeecCCCCC-CCCCccccCCCCCCEEEccCCCCCCccCcccccCcCcceEeeeccccccCCCccccccCCCCeee
Q 045798 78 SFLREINLSNNTIQ-GEIPPEFGRLFRLEALFLSNNSLVGKIPANLSYCSRLTVLCIEYNKLQGRIPLEFVSLSKLKDLS 156 (1008)
Q Consensus 78 ~~L~~L~L~~n~~~-~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 156 (1008)
++|++|+|++|.++ +.+|..+..+++|++|+|++|.+++. ..++.+++|++|+|++|++++.+|..+..+++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 44555555555554 44455555555555555555555533 4445555555555555555544444444445555555
Q ss_pred cccccCC
Q 045798 157 LAKNKLT 163 (1008)
Q Consensus 157 L~~n~l~ 163 (1008)
|++|+++
T Consensus 102 Ls~N~l~ 108 (168)
T 2ell_A 102 LSGNKLK 108 (168)
T ss_dssp CBSSSCC
T ss_pred ccCCccC
Confidence 5554444
No 380
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.63 E-value=8.7e-16 Score=152.85 Aligned_cols=134 Identities=29% Similarity=0.356 Sum_probs=84.3
Q ss_pred CCCCcccceEEcCCCCeEEEEeccccCCCCccCcCccCCccCCeeeecCCCCCCCCCccccCCCCCCEEEccCCCCCCcc
Q 045798 39 RHFCEWEGITCGRRHRRVTALDLMSKSLSGSLSPHLGNLSFLREINLSNNTIQGEIPPEFGRLFRLEALFLSNNSLVGKI 118 (1008)
Q Consensus 39 ~~~c~w~gv~c~~~~~~v~~l~l~~~~l~~~l~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~ 118 (1008)
.+.|+|.++.|.. ++++ .+|..+. ++|++|++++|++++..+..|..+++|++|+|++|++++..
T Consensus 4 ~C~C~~~~l~~~~------------~~l~-~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 68 (177)
T 2o6r_A 4 RCSCSGTEIRCNS------------KGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLP 68 (177)
T ss_dssp TCEEETTEEECCS------------SCCS-SCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCC
T ss_pred CCEeCCCEEEecC------------CCCc-cCCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeC
Confidence 4567888777753 3333 3444332 57778888888877666666777777777777777777555
Q ss_pred CcccccCcCcceEeeeccccccCCCccccccCCCCeeecccccCCCCCCCCCccccccchhhcccccCC
Q 045798 119 PANLSYCSRLTVLCIEYNKLQGRIPLEFVSLSKLKDLSLAKNKLTGGIPPFLGNLTSLEVLSLAGNSFG 187 (1008)
Q Consensus 119 p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 187 (1008)
+..++.+++|++|+|++|+|++..+..|..+++|++|++++|++++..+..+..+++|++|++++|.+.
T Consensus 69 ~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 137 (177)
T 2o6r_A 69 DGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWD 137 (177)
T ss_dssp TTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred hhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCee
Confidence 555666677777777766666555555566666666666666666443334455555555555555554
No 381
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.63 E-value=4.1e-16 Score=153.76 Aligned_cols=136 Identities=24% Similarity=0.248 Sum_probs=94.6
Q ss_pred CCCCEEEccCCCCC-CccCcccccCcCcceEeeeccccccCCCccccccCCCCeeecccccCCCCCCCCCccccccchhh
Q 045798 102 FRLEALFLSNNSLV-GKIPANLSYCSRLTVLCIEYNKLQGRIPLEFVSLSKLKDLSLAKNKLTGGIPPFLGNLTSLEVLS 180 (1008)
Q Consensus 102 ~~L~~L~Ls~n~l~-~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 180 (1008)
++|++|+|++|.++ +.+|..+..+++|++|+|++|.+++. ..+..+++|++|+|++|++++.+|..+.++++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 66777777777776 56677777777777777777777754 6667777777777777777755666666677777777
Q ss_pred cccccCCCCC-CccccCCCCCcEEEecCCcccccCC---ccccCCCCcceeccccccccccCCh
Q 045798 181 LAGNSFGRNI-PDSLGQLKQLKILAIGGNNLSGPIP---PSIYNLSFLVVFSVSHNQIHGSLPP 240 (1008)
Q Consensus 181 L~~n~l~~~~-~~~~~~l~~L~~L~L~~n~l~~~~~---~~~~~l~~L~~L~ls~N~l~~~lp~ 240 (1008)
+++|++++.. +..+..+++|+.|++++|.+++..+ ..+..+++|+.|++++|.+. .+|.
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~-~~~~ 164 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ-EAPD 164 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC-BCCS
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh-hccc
Confidence 7777775532 2567777777777777777775444 36777777777777777766 4543
No 382
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.62 E-value=4.4e-16 Score=150.14 Aligned_cols=128 Identities=18% Similarity=0.181 Sum_probs=81.0
Q ss_pred CCCceEEccCCccc-ccccccccCCCCcceeeccccccccccCCCCcCCCcccEeecccccccCCcchhhhhhhhhhhhh
Q 045798 398 QKLQGLDFSGNHFS-GEIPSSLGNLSSLYEVFFNNNNLSGVIPFSLGNLKRLAFLEMSGNELSGTIPEDIFNISYLSNSL 476 (1008)
Q Consensus 398 ~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~~~~~~~~~~~~L 476 (1008)
++|+.|++++|.++ +.+|..+..+++|+.|++++|.+.+. ..++.+++|++|+|++|++++
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~---------------- 78 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSG---------------- 78 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCS----------------
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccc----------------
Confidence 45666666666665 55565566666666666666666644 556666677777777776663
Q ss_pred cccCccccCCCcccccccccccccccccccccCC-CCcccccccccceeeccCcccccchh---hhhhccccccEEecCC
Q 045798 477 NLARNHLVGIIPPRIGNLRALRSFDVSNNDLSGE-IPIELGHCSSLEEIYLAGNLFHGSIP---SFFNALKGVQKIDLSR 552 (1008)
Q Consensus 477 ~L~~N~l~~~~p~~~~~l~~L~~Ldls~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p---~~~~~l~~L~~L~ls~ 552 (1008)
.+|..++.+++|++|++++|.+++. .|..++.+++|++|++++|++++..+ ..++.+++|+.||+++
T Consensus 79 ---------~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 79 ---------GLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp ---------CTHHHHHHCTTCCEEECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred ---------hHHHHhhhCCCCCEEECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 2444455566677777777776642 23566667777777777777775544 4677777777777653
No 383
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.61 E-value=7e-16 Score=168.77 Aligned_cols=138 Identities=19% Similarity=0.190 Sum_probs=99.0
Q ss_pred cCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccc--------------hhhHHH--------HHHHHHHhhcCCC
Q 045798 684 NGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCE--------------GASKSF--------MAECKALKNIRHR 741 (1008)
Q Consensus 684 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--------------~~~~~~--------~~E~~~l~~l~h~ 741 (1008)
.-|.+.+.||+|++|.||+|.+. +|+.||||+++.... ...... .+|...+.++.+.
T Consensus 95 ~iY~I~~~IG~Gk~a~VY~a~d~-~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~ 173 (397)
T 4gyi_A 95 DVYSVGSRIGVGKESDIMIVADE-KGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEE 173 (397)
T ss_dssp SCSEEEEEEEECSSEEEEEEECT-TCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CEEEecCEeeeCCceEEEEEECC-CCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhc
Confidence 34889999999999999999985 799999999763210 001122 3455555555333
Q ss_pred Cce--eeeeccccccccCCceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCC
Q 045798 742 NLV--KVITSCSSIDFQGNDFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEP 819 (1008)
Q Consensus 742 niv--~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ 819 (1008)
++. ..+++ ...++||||++|++|.++... .....++.|++.+|.|||+. |
T Consensus 174 gv~vp~p~~~---------~~~~LVME~i~G~~L~~l~~~----------------~~~~~l~~qll~~l~~lH~~---g 225 (397)
T 4gyi_A 174 GFPVPEPIAQ---------SRHTIVMSLVDALPMRQVSSV----------------PDPASLYADLIALILRLAKH---G 225 (397)
T ss_dssp TCSCCCEEEE---------ETTEEEEECCSCEEGGGCCCC----------------SCHHHHHHHHHHHHHHHHHT---T
T ss_pred CCCCCeeeec---------cCceEEEEecCCccHhhhccc----------------HHHHHHHHHHHHHHHHHHHC---C
Confidence 321 11111 123799999999888776431 12356889999999999998 9
Q ss_pred ceeccCCCCCeeecCCC----------CeEEcccCcccccc
Q 045798 820 ILHCDLKPSNILLDNDL----------SGHIGDFGLARFHQ 850 (1008)
Q Consensus 820 ivH~Dlkp~NIll~~~~----------~~kL~Dfg~a~~~~ 850 (1008)
||||||||.|||+++++ .+.|+||+.+....
T Consensus 226 IVHrDLKp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~~~ 266 (397)
T 4gyi_A 226 LIHGDFNEFNILIREEKDAEDPSSITLTPIIIXFPQMVSMD 266 (397)
T ss_dssp EECSCCSTTSEEEEEEECSSCTTSEEEEEEECCCTTCEETT
T ss_pred CcCCCCCHHHEEEeCCCCcccccccccceEEEEeCCcccCC
Confidence 99999999999998776 38999999887543
No 384
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.61 E-value=2.2e-15 Score=151.87 Aligned_cols=108 Identities=30% Similarity=0.417 Sum_probs=48.8
Q ss_pred CCCEEEccCCCCCCccCcccccCcCcceEeeeccccccCCCccccccCCCCeeecccccCCCCCCCCCccccccchhhcc
Q 045798 103 RLEALFLSNNSLVGKIPANLSYCSRLTVLCIEYNKLQGRIPLEFVSLSKLKDLSLAKNKLTGGIPPFLGNLTSLEVLSLA 182 (1008)
Q Consensus 103 ~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 182 (1008)
+|++|+|++|+|+ .+|..|..+++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|.++++|++|+|+
T Consensus 32 ~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~ 110 (193)
T 2wfh_A 32 DVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLH 110 (193)
T ss_dssp TCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECC
Confidence 3444444444443 333344444444444444444443333444444444444444444444334444444444444444
Q ss_pred cccCCCCCCccccCCCCCcEEEecCCccc
Q 045798 183 GNSFGRNIPDSLGQLKQLKILAIGGNNLS 211 (1008)
Q Consensus 183 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 211 (1008)
+|+++...+..|..+++|+.|+|++|.+.
T Consensus 111 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 111 GNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp SSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 44444433344555555555555555554
No 385
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.60 E-value=8.5e-15 Score=164.90 Aligned_cols=264 Identities=15% Similarity=0.095 Sum_probs=136.1
Q ss_pred ccCCeeeecCCCCCCCCCccccCCCCCCEEEccCCCCCCccCcccccCcCcceEeeeccccccCCCccccccCCCCeeec
Q 045798 78 SFLREINLSNNTIQGEIPPEFGRLFRLEALFLSNNSLVGKIPANLSYCSRLTVLCIEYNKLQGRIPLEFVSLSKLKDLSL 157 (1008)
Q Consensus 78 ~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 157 (1008)
..++.+.+.+ .++.+-..+|.++ +|+.+.+.++ ++.....+|.++ +|+.+.+.. .++.+.+.+|.++++|+.+++
T Consensus 113 ~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l 187 (401)
T 4fdw_A 113 KGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADL 187 (401)
T ss_dssp SSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEEC
T ss_pred CCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeec
Confidence 4555555544 3443445556554 5666666555 554445555553 466666654 455455556666666666666
Q ss_pred ccccCCCCCCCCCccccccchhhcccccCCCCCCccccCCCCCcEEEecCCcccccCCccccCCCCcceecccccccccc
Q 045798 158 AKNKLTGGIPPFLGNLTSLEVLSLAGNSFGRNIPDSLGQLKQLKILAIGGNNLSGPIPPSIYNLSFLVVFSVSHNQIHGS 237 (1008)
Q Consensus 158 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~ 237 (1008)
.+|+++......|. ..+|+.+.|..+ +......+|.++++|+.+++..| ++.+...+|.+ .+|+.+.+. +.++ .
T Consensus 188 ~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp-~~i~-~ 261 (401)
T 4fdw_A 188 SKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLP-NGVT-N 261 (401)
T ss_dssp TTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEEE-TTCC-E
T ss_pred CCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEeC-CCcc-E
Confidence 66666643334444 356666666533 54555555666666666666553 44444555555 455555552 3343 4
Q ss_pred CChhhhhcCCCCcEEEeccccCC-----CCCCcccccCCCCceeecccccccccccccccCCCcccccccccccCCCCCC
Q 045798 238 LPPSLGLLLPNLKFFQIHHNFFS-----GSIPISLSNASKLEHIEIANNNFSGKLSVNFGGMKNLSLLNLQFSNLGSGES 312 (1008)
Q Consensus 238 lp~~~~~~l~~L~~L~L~~N~l~-----~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 312 (1008)
++...|..+++|+.+++.+|.+. ...+.+|.++++|+.+++. +.+..+...+|.
T Consensus 262 I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~-------------------- 320 (401)
T 4fdw_A 262 IASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLG-------------------- 320 (401)
T ss_dssp ECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTT--------------------
T ss_pred EChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhc--------------------
Confidence 55555555555555555555443 2333444455555555554 234444444444
Q ss_pred CcccccccccccCCCcEEEecCCcCCccCChhhhhhcccceeeeeccccccCCCCCcccccc-ccceEEecCccc
Q 045798 313 DEMGFMNSLTNCSKLRVLSLGGNQFRGALPHSIANLSSQLQILILSSNQFYGSIPLGIGNLV-DLYLLGMVENQF 386 (1008)
Q Consensus 313 ~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~L~~n~l 386 (1008)
++++|+.+.|..| ++..-...|.++ +|+.+++++|.+....+..|.+++ ++..|++..+.+
T Consensus 321 ----------~c~~L~~l~lp~~-l~~I~~~aF~~~--~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~ 382 (401)
T 4fdw_A 321 ----------GNRKVTQLTIPAN-VTQINFSAFNNT--GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESV 382 (401)
T ss_dssp ----------TCCSCCEEEECTT-CCEECTTSSSSS--CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGH
T ss_pred ----------CCCCccEEEECcc-ccEEcHHhCCCC--CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHH
Confidence 4445555555332 332223333333 355555555555444444455553 555666655544
No 386
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.59 E-value=6.8e-16 Score=148.82 Aligned_cols=127 Identities=24% Similarity=0.208 Sum_probs=76.9
Q ss_pred CccCCeeeecCCCCC-CCCCccccCCCCCCEEEccCCCCCCccCcccccCcCcceEeeeccccccCCCccccccCCCCee
Q 045798 77 LSFLREINLSNNTIQ-GEIPPEFGRLFRLEALFLSNNSLVGKIPANLSYCSRLTVLCIEYNKLQGRIPLEFVSLSKLKDL 155 (1008)
Q Consensus 77 l~~L~~L~L~~n~~~-~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L 155 (1008)
.++|++|++++|.++ +.+|..+..+++|++|++++|.+++. ..++.+++|++|++++|.+++.+|..+..+++|++|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 356777777777776 56666667777777777777777644 556666777777777777765566666666666666
Q ss_pred ecccccCCCC-CCCCCccccccchhhcccccCCCCCC---ccccCCCCCcEEEe
Q 045798 156 SLAKNKLTGG-IPPFLGNLTSLEVLSLAGNSFGRNIP---DSLGQLKQLKILAI 205 (1008)
Q Consensus 156 ~L~~n~l~~~-~~~~~~~l~~L~~L~L~~n~l~~~~~---~~~~~l~~L~~L~L 205 (1008)
++++|++++. .+..++.+++|++|++++|.+++..+ ..+..+++|+.|++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l 147 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDG 147 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETT
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccC
Confidence 6666666632 12445555555555555555543333 23444444444444
No 387
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.59 E-value=4.6e-15 Score=149.43 Aligned_cols=127 Identities=24% Similarity=0.333 Sum_probs=101.7
Q ss_pred CEEEccCCCCCCccCcccccCcCcceEeeeccccccCCCccccccCCCCeeecccccCCCCCCCCCccccccchhhcccc
Q 045798 105 EALFLSNNSLVGKIPANLSYCSRLTVLCIEYNKLQGRIPLEFVSLSKLKDLSLAKNKLTGGIPPFLGNLTSLEVLSLAGN 184 (1008)
Q Consensus 105 ~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 184 (1008)
+++++++|+++ .+|..+. ++|++|+|++|+|+ .+|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 46777777777 5665543 57888899999888 67788888888888888888888777778888888888888888
Q ss_pred cCCCCCCccccCCCCCcEEEecCCcccccCCccccCCCCcceecccccccc
Q 045798 185 SFGRNIPDSLGQLKQLKILAIGGNNLSGPIPPSIYNLSFLVVFSVSHNQIH 235 (1008)
Q Consensus 185 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~ 235 (1008)
++++..+..|..+++|+.|+|++|.++...+..|..+++|+.|+|++|.+.
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 888877778888888888888888888666667777777777777777775
No 388
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.57 E-value=8.2e-15 Score=145.77 Aligned_cols=129 Identities=23% Similarity=0.207 Sum_probs=80.5
Q ss_pred CCeeeecCCCCCCCCCccccCCCCCCEEEccCCCCCCccCcccccCcCcceEeeeccccccCCCccccccCCCCeeeccc
Q 045798 80 LREINLSNNTIQGEIPPEFGRLFRLEALFLSNNSLVGKIPANLSYCSRLTVLCIEYNKLQGRIPLEFVSLSKLKDLSLAK 159 (1008)
Q Consensus 80 L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~ 159 (1008)
.+.+++++|+++ .+|..+ .++|++|++++|++++..+..++.+++|++|++++|++++..+..|..+++|++|+|++
T Consensus 9 ~~~l~~~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 356777777776 455433 25677777777777755555666677777777777777655555566666666666666
Q ss_pred ccCCCCCCCCCccccccchhhcccccCCCCCCccccCCCCCcEEEecCCccc
Q 045798 160 NKLTGGIPPFLGNLTSLEVLSLAGNSFGRNIPDSLGQLKQLKILAIGGNNLS 211 (1008)
Q Consensus 160 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 211 (1008)
|++++..+..+.++++|++|++++|++++..+..|..+++|++|++++|.++
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 137 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWD 137 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCee
Confidence 6666555555566666666666666665544444555556666666655555
No 389
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.56 E-value=9e-17 Score=163.18 Aligned_cols=135 Identities=19% Similarity=0.268 Sum_probs=68.9
Q ss_pred CCCCCceEEccCCcccccccc------cccCCCCcceeeccccccccccCCCCcCCCcccEeecccccccCCcchhhhhh
Q 045798 396 KLQKLQGLDFSGNHFSGEIPS------SLGNLSSLYEVFFNNNNLSGVIPFSLGNLKRLAFLEMSGNELSGTIPEDIFNI 469 (1008)
Q Consensus 396 ~l~~L~~L~Ls~N~l~~~~p~------~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~~~~~~ 469 (1008)
....++.+++++|.+.+.+|. .+..+++|++|++++|.+++ +| .+..+++|++|++++|+++ .+
T Consensus 16 ~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l------- 85 (198)
T 1ds9_A 16 ERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KI------- 85 (198)
T ss_dssp HTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SC-------
T ss_pred hcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cc-------
Confidence 334445555555555544444 55555556666666665554 44 5555666666666666665 22
Q ss_pred hhhhhhhcccCccccCCCcccccccccccccccccccccCCCCcccccccccceeeccCcccccchh-hhhhccccccEE
Q 045798 470 SYLSNSLNLARNHLVGIIPPRIGNLRALRSFDVSNNDLSGEIPIELGHCSSLEEIYLAGNLFHGSIP-SFFNALKGVQKI 548 (1008)
Q Consensus 470 ~~~~~~L~L~~N~l~~~~p~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L 548 (1008)
|..+..+++|+.|+|++|.+++ +| .++.+++|++|+|++|++++..+ ..+..+++|+.|
T Consensus 86 ------------------~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L 145 (198)
T 1ds9_A 86 ------------------ENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDL 145 (198)
T ss_dssp ------------------SSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEE
T ss_pred ------------------cchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEE
Confidence 2333334455555555555542 33 34455555555555555553221 345555555555
Q ss_pred ecCCCccccccc
Q 045798 549 DLSRNNLSGQIP 560 (1008)
Q Consensus 549 ~ls~N~l~~~~p 560 (1008)
++++|++++.+|
T Consensus 146 ~l~~N~l~~~~~ 157 (198)
T 1ds9_A 146 LLAGNPLYNDYK 157 (198)
T ss_dssp EECSCHHHHHHH
T ss_pred EecCCccccccc
Confidence 555555555444
No 390
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.56 E-value=7.9e-17 Score=163.63 Aligned_cols=156 Identities=22% Similarity=0.254 Sum_probs=112.3
Q ss_pred cceeeeeccccccCCCCCccccccccceEEecCccccCCcchhccCCCCCceEEccCCcccccccccccCCCCcceeecc
Q 045798 351 QLQILILSSNQFYGSIPLGIGNLVDLYLLGMVENQFTGAIPKEMGKLQKLQGLDFSGNHFSGEIPSSLGNLSSLYEVFFN 430 (1008)
Q Consensus 351 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 430 (1008)
.++.++++.|.+++.+|. ++ .+|..+..+++|++|+|++|++++ +| .+..+++|+.|+++
T Consensus 19 ~l~~l~l~~~~l~~~~~~-----------------l~-~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~ 78 (198)
T 1ds9_A 19 SVVATEAEKVELHGMIPP-----------------IE-KMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLG 78 (198)
T ss_dssp CCCCTTCSEEECCBCCTT-----------------CC-CCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEE
T ss_pred cccCcchheeEeccccCc-----------------Hh-hhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECC
Confidence 466666666666654442 11 233467777777777777777774 55 67777778888888
Q ss_pred ccccccccCCCCcCCCcccEeecccccccCCcchhhhhhhhhhhhhcccCccccCCCcccccccccccccccccccccCC
Q 045798 431 NNNLSGVIPFSLGNLKRLAFLEMSGNELSGTIPEDIFNISYLSNSLNLARNHLVGIIPPRIGNLRALRSFDVSNNDLSGE 510 (1008)
Q Consensus 431 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~~~~~~~~~~~~L~L~~N~l~~~~p~~~~~l~~L~~Ldls~N~l~~~ 510 (1008)
+|.++ .+|..+..+++|++|+|++|++++ +| .++.+++|+.|++++|.+++
T Consensus 79 ~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~--------------------------l~-~~~~l~~L~~L~l~~N~i~~- 129 (198)
T 1ds9_A 79 RNLIK-KIENLDAVADTLEELWISYNQIAS--------------------------LS-GIEKLVNLRVLYMSNNKITN- 129 (198)
T ss_dssp EEEEC-SCSSHHHHHHHCSEEEEEEEECCC--------------------------HH-HHHHHHHSSEEEESEEECCC-
T ss_pred CCCcc-cccchhhcCCcCCEEECcCCcCCc--------------------------CC-ccccCCCCCEEECCCCcCCc-
Confidence 88777 566667777888888888888873 22 35667788888888888873
Q ss_pred CC--cccccccccceeeccCcccccchhh----------hhhccccccEEecCCCcccc
Q 045798 511 IP--IELGHCSSLEEIYLAGNLFHGSIPS----------FFNALKGVQKIDLSRNNLSG 557 (1008)
Q Consensus 511 ~p--~~~~~l~~L~~L~L~~N~l~~~~p~----------~~~~l~~L~~L~ls~N~l~~ 557 (1008)
+| ..+..+++|++|++++|++.+.+|. .+..+++|+.|| +|.++.
T Consensus 130 ~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~~ 186 (198)
T 1ds9_A 130 WGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVDV 186 (198)
T ss_dssp HHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGTT
T ss_pred hhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhCCCcEEEC--CcccCH
Confidence 33 3678888899999999998877665 388899999887 666653
No 391
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.55 E-value=5.6e-14 Score=158.21 Aligned_cols=247 Identities=12% Similarity=0.111 Sum_probs=200.0
Q ss_pred CccCCccCCeeeecCCCCCCCCCccccCCCCCCEEEccCCCCCCccCcccccCcCcceEeeeccccccCCCccccccCCC
Q 045798 73 HLGNLSFLREINLSNNTIQGEIPPEFGRLFRLEALFLSNNSLVGKIPANLSYCSRLTVLCIEYNKLQGRIPLEFVSLSKL 152 (1008)
Q Consensus 73 ~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L 152 (1008)
.+.. .+|+.+.|.++ ++.+-..+|.++ +|+.+.+.+ .++...+.+|.+|++|+.++++.|+++.+....|. ..+|
T Consensus 131 aF~~-~~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L 205 (401)
T 4fdw_A 131 AFRN-SQIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGI 205 (401)
T ss_dssp TTTT-CCCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCC
T ss_pred hccc-CCccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-eccc
Confidence 4555 47999999876 776667788885 799999986 77767778999999999999999999966666776 6899
Q ss_pred CeeecccccCCCCCCCCCccccccchhhcccccCCCCCCccccCCCCCcEEEecCCcccccCCccccCCCCcceeccccc
Q 045798 153 KDLSLAKNKLTGGIPPFLGNLTSLEVLSLAGNSFGRNIPDSLGQLKQLKILAIGGNNLSGPIPPSIYNLSFLVVFSVSHN 232 (1008)
Q Consensus 153 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ls~N 232 (1008)
+.+.|.++ ++.+....|.++++|+.+++..| ++.....+|.+ .+|+.+.+ .+.++.+...+|.++++|+.+++.+|
T Consensus 206 ~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~ 281 (401)
T 4fdw_A 206 EEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGS 281 (401)
T ss_dssp SEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESS
T ss_pred CEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCc
Confidence 99999855 77677889999999999999975 66777788888 89999999 45677788899999999999999998
Q ss_pred ccc----ccCChhhhhcCCCCcEEEeccccCCCCCCcccccCCCCceeecccccccccccccccCCCcccccccccccCC
Q 045798 233 QIH----GSLPPSLGLLLPNLKFFQIHHNFFSGSIPISLSNASKLEHIEIANNNFSGKLSVNFGGMKNLSLLNLQFSNLG 308 (1008)
Q Consensus 233 ~l~----~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~ 308 (1008)
.+. ..++...|..+++|+.++|.+ .++.+...+|.++++|+.+++..| ++.+...+|.++ +|+.+++..|.+.
T Consensus 282 ~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~ 358 (401)
T 4fdw_A 282 TFNDDPEAMIHPYCLEGCPKLARFEIPE-SIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPP 358 (401)
T ss_dssp CCCCCTTCEECTTTTTTCTTCCEECCCT-TCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCC
T ss_pred cccCCcccEECHHHhhCCccCCeEEeCC-ceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCc
Confidence 764 248888999999999999994 577677889999999999999665 777788888888 8888888887776
Q ss_pred CCCCCcccccccccccC-CCcEEEecCCcC
Q 045798 309 SGESDEMGFMNSLTNCS-KLRVLSLGGNQF 337 (1008)
Q Consensus 309 ~~~~~~~~~~~~l~~l~-~L~~L~Ls~N~l 337 (1008)
.+... .|.+++ .+..|++..+.+
T Consensus 359 ~l~~~------~F~~~~~~l~~l~vp~~~~ 382 (401)
T 4fdw_A 359 QVFEK------VWYGFPDDITVIRVPAESV 382 (401)
T ss_dssp BCCCS------SCCCSCTTCCEEEECGGGH
T ss_pred ccccc------cccCCCCCccEEEeCHHHH
Confidence 65433 344442 566666655544
No 392
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.53 E-value=6.8e-15 Score=146.13 Aligned_cols=133 Identities=20% Similarity=0.238 Sum_probs=72.3
Q ss_pred ccCCCCCceEEccCCcccccccccccCCC-CcceeeccccccccccCCCCcCCCcccEeecccccccCCcchhhhhhhhh
Q 045798 394 MGKLQKLQGLDFSGNHFSGEIPSSLGNLS-SLYEVFFNNNNLSGVIPFSLGNLKRLAFLEMSGNELSGTIPEDIFNISYL 472 (1008)
Q Consensus 394 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~~~~~~~~~ 472 (1008)
+..+.+|+.|+|++|+++ .+|. +..+. +|+.|++++|.+++. ..|..+++|++|+|++|++++ +|
T Consensus 15 ~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~-~~--------- 80 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICR-IG--------- 80 (176)
T ss_dssp EECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCE-EC---------
T ss_pred cCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccc-cC---------
Confidence 334455555555555555 2332 33332 555555555555543 355556666666666666651 11
Q ss_pred hhhhcccCccccCCCcccccccccccccccccccccCCCCc--ccccccccceeeccCcccccchhh----hhhcccccc
Q 045798 473 SNSLNLARNHLVGIIPPRIGNLRALRSFDVSNNDLSGEIPI--ELGHCSSLEEIYLAGNLFHGSIPS----FFNALKGVQ 546 (1008)
Q Consensus 473 ~~~L~L~~N~l~~~~p~~~~~l~~L~~Ldls~N~l~~~~p~--~~~~l~~L~~L~L~~N~l~~~~p~----~~~~l~~L~ 546 (1008)
+..++.+++|+.|+|++|.++ .+|. .+..+++|+.|++++|+++ .+|. .+..+++|+
T Consensus 81 ---------------~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~ 143 (176)
T 1a9n_A 81 ---------------EGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVR 143 (176)
T ss_dssp ---------------SCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCS
T ss_pred ---------------cchhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccc
Confidence 122344555666666666654 4444 5556666666666666665 3444 366666777
Q ss_pred EEecCCCcccc
Q 045798 547 KIDLSRNNLSG 557 (1008)
Q Consensus 547 ~L~ls~N~l~~ 557 (1008)
.||+++|.+..
T Consensus 144 ~Ld~~~n~~~~ 154 (176)
T 1a9n_A 144 VLDFQKVKLKE 154 (176)
T ss_dssp EETTEECCHHH
T ss_pred eeCCCcCCHHH
Confidence 77776666553
No 393
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.51 E-value=9.4e-15 Score=145.10 Aligned_cols=135 Identities=16% Similarity=0.165 Sum_probs=101.8
Q ss_pred cccccccceEEecCccccCCcchhccCCC-CCceEEccCCcccccccccccCCCCcceeeccccccccccCCCCcCCCcc
Q 045798 370 IGNLVDLYLLGMVENQFTGAIPKEMGKLQ-KLQGLDFSGNHFSGEIPSSLGNLSSLYEVFFNNNNLSGVIPFSLGNLKRL 448 (1008)
Q Consensus 370 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L 448 (1008)
+.++.+|+.|++++|+++. +|. +..+. +|+.|+|++|.+++. ..+..+++|+.|++++|.|++..+..|..+++|
T Consensus 15 ~~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 90 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 90 (176)
T ss_dssp EECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred cCCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCC
Confidence 4556677777777777774 344 44444 888888888888854 678888888888888888886655556888899
Q ss_pred cEeecccccccCCcchhhhhhhhhhhhhcccCccccCCCcccccccccccccccccccccCCCCcc----ccccccccee
Q 045798 449 AFLEMSGNELSGTIPEDIFNISYLSNSLNLARNHLVGIIPPRIGNLRALRSFDVSNNDLSGEIPIE----LGHCSSLEEI 524 (1008)
Q Consensus 449 ~~L~Ls~N~l~~~lp~~~~~~~~~~~~L~L~~N~l~~~~p~~~~~l~~L~~Ldls~N~l~~~~p~~----~~~l~~L~~L 524 (1008)
++|+|++|+++ .+|. ...++.+++|+.|++++|.++ .+|.. ++.+++|+.|
T Consensus 91 ~~L~L~~N~i~-~~~~-----------------------~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~L 145 (176)
T 1a9n_A 91 TELILTNNSLV-ELGD-----------------------LDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVL 145 (176)
T ss_dssp CEEECCSCCCC-CGGG-----------------------GGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEE
T ss_pred CEEECCCCcCC-cchh-----------------------hHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCcccee
Confidence 99999999886 2221 015677888889999999887 56764 8888999999
Q ss_pred eccCccccc
Q 045798 525 YLAGNLFHG 533 (1008)
Q Consensus 525 ~L~~N~l~~ 533 (1008)
|+++|.+..
T Consensus 146 d~~~n~~~~ 154 (176)
T 1a9n_A 146 DFQKVKLKE 154 (176)
T ss_dssp TTEECCHHH
T ss_pred CCCcCCHHH
Confidence 999998874
No 394
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.50 E-value=1.9e-13 Score=154.79 Aligned_cols=313 Identities=12% Similarity=0.050 Sum_probs=148.1
Q ss_pred CccccCCCCCCEEEccCCCCCCccCcccccCcCcceEeeeccccccCCCccccccCCCCeeecccccCCCCCCCCCcccc
Q 045798 95 PPEFGRLFRLEALFLSNNSLVGKIPANLSYCSRLTVLCIEYNKLQGRIPLEFVSLSKLKDLSLAKNKLTGGIPPFLGNLT 174 (1008)
Q Consensus 95 p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 174 (1008)
..+|.++.+|+.+.|..+ ++.....+|.++++|+.++|..+ ++.+...+|.++.+|+.+.+..+ +.......|.++.
T Consensus 64 ~~AF~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~~~~ 140 (394)
T 4fs7_A 64 YAAFQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEAFKGCD 140 (394)
T ss_dssp TTTTTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTCC
T ss_pred HHHhhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecceeeeccc
Confidence 445556666666666432 44344455566666666666533 44344455555566665555433 2223344454443
Q ss_pred ccchhhcccccCCCCCCccccCCCCCcEEEecCCcccccCCccccCCCCcceeccccccccccCChhhhhcCCCCcEEEe
Q 045798 175 SLEVLSLAGNSFGRNIPDSLGQLKQLKILAIGGNNLSGPIPPSIYNLSFLVVFSVSHNQIHGSLPPSLGLLLPNLKFFQI 254 (1008)
Q Consensus 175 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~lp~~~~~~l~~L~~L~L 254 (1008)
.++....... ......+|..+++|+.+.+.++. ..+...+|.++.+|+.+++..| ++ .++...+.....|+.+.+
T Consensus 141 ~~~~~~~~~~--~~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~-~I~~~~F~~~~~L~~i~~ 215 (394)
T 4fs7_A 141 FKEITIPEGV--TVIGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LK-IIRDYCFAECILLENMEF 215 (394)
T ss_dssp CSEEECCTTC--CEECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CC-EECTTTTTTCTTCCBCCC
T ss_pred ccccccCccc--cccchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ce-EeCchhhccccccceeec
Confidence 3332222221 12334456666666666665443 2244555666666666666554 33 444444444555555544
Q ss_pred ccccCCCCCCcccccCCCCceeecccccccccccccccCCCcccccccccccCCCCCCCcccccccccccCCCcEEEecC
Q 045798 255 HHNFFSGSIPISLSNASKLEHIEIANNNFSGKLSVNFGGMKNLSLLNLQFSNLGSGESDEMGFMNSLTNCSKLRVLSLGG 334 (1008)
Q Consensus 255 ~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~ 334 (1008)
..+... +........+|+.+.+..+ +..+....|.+...|+.+.+ ..
T Consensus 216 ~~~~~~--i~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~------------------------------~~ 262 (394)
T 4fs7_A 216 PNSLYY--LGDFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISI------------------------------QN 262 (394)
T ss_dssp CTTCCE--ECTTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEE------------------------------CC
T ss_pred CCCceE--eehhhcccCCCceEEECCC-ceecccccccccccceeEEc------------------------------CC
Confidence 443322 1222223344555544322 22233334444444444444 33
Q ss_pred CcCCccCChhhhhhcccceeeeeccccccCCCCCccccccccceEEecCccccCCcchhccCCCCCceEEccCCcccccc
Q 045798 335 NQFRGALPHSIANLSSQLQILILSSNQFYGSIPLGIGNLVDLYLLGMVENQFTGAIPKEMGKLQKLQGLDFSGNHFSGEI 414 (1008)
Q Consensus 335 N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 414 (1008)
+... .....+.... .++.+.+..+.+. ...|..+.+|+.+.+.++ ++.+....|.++.+|+.++|..+ ++..-
T Consensus 263 ~~~~-i~~~~F~~~~-~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~ 335 (394)
T 4fs7_A 263 NKLR-IGGSLFYNCS-GLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIG 335 (394)
T ss_dssp TTCE-ECSCTTTTCT-TCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEEC
T ss_pred Ccce-eecccccccc-ccceeccCceeec---cccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEh
Confidence 3222 1122222221 2444444333221 123445555555555433 44344455666666666666533 44334
Q ss_pred cccccCCCCcceeeccccccccccCCCCcCCCcccEeecccc
Q 045798 415 PSSLGNLSSLYEVFFNNNNLSGVIPFSLGNLKRLAFLEMSGN 456 (1008)
Q Consensus 415 p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N 456 (1008)
..+|.++++|+.+.+..| +..+-..+|.++++|+.+++..+
T Consensus 336 ~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 336 KRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp TTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG
T ss_pred HHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC
Confidence 455666666666666554 44455556666666666666543
No 395
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.50 E-value=4e-13 Score=152.13 Aligned_cols=334 Identities=12% Similarity=0.028 Sum_probs=215.9
Q ss_pred CCCccCcccccCcCcceEeeeccccccCCCccccccCCCCeeecccccCCCCCCCCCccccccchhhcccccCCCCCCcc
Q 045798 114 LVGKIPANLSYCSRLTVLCIEYNKLQGRIPLEFVSLSKLKDLSLAKNKLTGGIPPFLGNLTSLEVLSLAGNSFGRNIPDS 193 (1008)
Q Consensus 114 l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 193 (1008)
++.+...+|.++.+|+.+.|.. .++.+-..+|.++++|+.+++.++ ++......|.++.+|+.+.+..+ +......+
T Consensus 59 VtsIg~~AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~a 135 (394)
T 4fs7_A 59 VVSIGYAAFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEA 135 (394)
T ss_dssp EEEECTTTTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTT
T ss_pred EeEhHHHHhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeeccee
Confidence 4545566788888888888864 466566677888888888888654 55455667777778877776544 43445556
Q ss_pred ccCCCCCcEEEecCCcccccCCccccCCCCcceeccccccccccCChhhhhcCCCCcEEEeccccCCCCCCcccccCCCC
Q 045798 194 LGQLKQLKILAIGGNNLSGPIPPSIYNLSFLVVFSVSHNQIHGSLPPSLGLLLPNLKFFQIHHNFFSGSIPISLSNASKL 273 (1008)
Q Consensus 194 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L 273 (1008)
|..+..+....... +..+...+|.++++|+.+.+.++.. .++.. +|.++.+|
T Consensus 136 F~~~~~~~~~~~~~--~~~i~~~aF~~c~~L~~i~l~~~~~--~I~~~------------------------~F~~c~~L 187 (394)
T 4fs7_A 136 FKGCDFKEITIPEG--VTVIGDEAFATCESLEYVSLPDSME--TLHNG------------------------LFSGCGKL 187 (394)
T ss_dssp TTTCCCSEEECCTT--CCEECTTTTTTCTTCCEEECCTTCC--EECTT------------------------TTTTCTTC
T ss_pred eecccccccccCcc--ccccchhhhcccCCCcEEecCCccc--eeccc------------------------cccCCCCc
Confidence 66665433332222 2223345566666666666554322 34444 44555555
Q ss_pred ceeecccccccccccccccCCCcccccccccccCCCCCCCcccccccccccCCCcEEEecCCcCCccCChhhhhhcccce
Q 045798 274 EHIEIANNNFSGKLSVNFGGMKNLSLLNLQFSNLGSGESDEMGFMNSLTNCSKLRVLSLGGNQFRGALPHSIANLSSQLQ 353 (1008)
Q Consensus 274 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~ 353 (1008)
+.+++..| +..+....|.+...|+.+.+..+..... .......+|+.+.+..+ ++......+.... .|+
T Consensus 188 ~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~i~--------~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~-~l~ 256 (394)
T 4fs7_A 188 KSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYYLG--------DFALSKTGVKNIIIPDS-FTELGKSVFYGCT-DLE 256 (394)
T ss_dssp CBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCEEC--------TTTTTTCCCCEEEECTT-CCEECSSTTTTCS-SCC
T ss_pred eEEEcCCC-ceEeCchhhccccccceeecCCCceEee--------hhhcccCCCceEEECCC-ceecccccccccc-cce
Confidence 55555544 4444555566666666665544322111 12233456777777543 3322233444443 699
Q ss_pred eeeeccccccCCCCCccccccccceEEecCccccCCcchhccCCCCCceEEccCCcccccccccccCCCCcceeeccccc
Q 045798 354 ILILSSNQFYGSIPLGIGNLVDLYLLGMVENQFTGAIPKEMGKLQKLQGLDFSGNHFSGEIPSSLGNLSSLYEVFFNNNN 433 (1008)
Q Consensus 354 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~ 433 (1008)
.+.+..+... .....|.....++.+....+.+. ...|..+.+|+.+.+..+ ++.....+|.++.+|+.+.|.++
T Consensus 257 ~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~- 330 (394)
T 4fs7_A 257 SISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL- 330 (394)
T ss_dssp EEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-
T ss_pred eEEcCCCcce-eeccccccccccceeccCceeec---cccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-
Confidence 9999887655 56677889999999988776543 456888999999999876 66466678999999999999755
Q ss_pred cccccCCCCcCCCcccEeecccccccCCcchhhhhhhhhhhhhcccCccccCCCcccccccccccc
Q 045798 434 LSGVIPFSLGNLKRLAFLEMSGNELSGTIPEDIFNISYLSNSLNLARNHLVGIIPPRIGNLRALRS 499 (1008)
Q Consensus 434 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~~~~~~~~~~~~L~L~~N~l~~~~p~~~~~l~~L~~ 499 (1008)
+..+-..+|.++++|+.+++..| ++ .|+...|..-..++.+++..+ ++ .+..+|.++++|+.
T Consensus 331 v~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~C~~L~~i~lp~~-~~-~~~~~F~~c~~L~~ 392 (394)
T 4fs7_A 331 VEEIGKRSFRGCTSLSNINFPLS-LR-KIGANAFQGCINLKKVELPKR-LE-QYRYDFEDTTKFKW 392 (394)
T ss_dssp CCEECTTTTTTCTTCCEECCCTT-CC-EECTTTBTTCTTCCEEEEEGG-GG-GGGGGBCTTCEEEE
T ss_pred ccEEhHHhccCCCCCCEEEECcc-cc-EehHHHhhCCCCCCEEEECCC-CE-EhhheecCCCCCcE
Confidence 77677889999999999999877 76 788888877666677777644 22 22345555555554
No 396
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.41 E-value=6.5e-13 Score=130.65 Aligned_cols=107 Identities=23% Similarity=0.297 Sum_probs=86.3
Q ss_pred ceeeeeccccccCCCCCccccccccceEEecCccccCCcchhccCCCCCceEEccCCcccccccccccCCCCcceeeccc
Q 045798 352 LQILILSSNQFYGSIPLGIGNLVDLYLLGMVENQFTGAIPKEMGKLQKLQGLDFSGNHFSGEIPSSLGNLSSLYEVFFNN 431 (1008)
Q Consensus 352 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~ 431 (1008)
.+.+++++|.++ .+|..+. ++|+.|+|++|+|++..|..|..+++|++|+|++|+|++..+..|.++++|++|+|++
T Consensus 11 ~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 456777777776 4665553 6778888888888877788888888888888888888877677778888899999999
Q ss_pred cccccccCCCCcCCCcccEeecccccccCC
Q 045798 432 NNLSGVIPFSLGNLKRLAFLEMSGNELSGT 461 (1008)
Q Consensus 432 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 461 (1008)
|+|++..+..|..+++|+.|+|++|.+++.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 117 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCA 117 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTT
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCC
Confidence 999877777889999999999999999843
No 397
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.40 E-value=6.7e-13 Score=130.56 Aligned_cols=103 Identities=27% Similarity=0.276 Sum_probs=60.9
Q ss_pred EEeccccCCCCccCcCccCCccCCeeeecCCCCCCCCCccccCCCCCCEEEccCCCCCCccCcccccCcCcceEeeeccc
Q 045798 58 ALDLMSKSLSGSLSPHLGNLSFLREINLSNNTIQGEIPPEFGRLFRLEALFLSNNSLVGKIPANLSYCSRLTVLCIEYNK 137 (1008)
Q Consensus 58 ~l~l~~~~l~~~l~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~ 137 (1008)
.+|++++.++ .+|..+. +.|++|+|++|+|++..|..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+
T Consensus 13 ~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~ 89 (170)
T 3g39_A 13 TVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQ 89 (170)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCc
Confidence 3444555555 3555443 566666666666665556666666666666666666665555555666666666666666
Q ss_pred cccCCCccccccCCCCeeecccccCC
Q 045798 138 LQGRIPLEFVSLSKLKDLSLAKNKLT 163 (1008)
Q Consensus 138 l~~~~p~~~~~l~~L~~L~L~~n~l~ 163 (1008)
|++..+..|..+++|++|+|++|.++
T Consensus 90 l~~~~~~~~~~l~~L~~L~L~~N~~~ 115 (170)
T 3g39_A 90 LKSIPRGAFDNLKSLTHIWLLNNPWD 115 (170)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred cCEeCHHHhcCCCCCCEEEeCCCCCC
Confidence 66544445555666666666666555
No 398
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.40 E-value=9.9e-13 Score=129.77 Aligned_cols=110 Identities=25% Similarity=0.308 Sum_probs=83.4
Q ss_pred eeeeeccccccCCCCCccccccccceEEecCccccCCcchhccCCCCCceEEccCCcccccccccccCCCCcceeecccc
Q 045798 353 QILILSSNQFYGSIPLGIGNLVDLYLLGMVENQFTGAIPKEMGKLQKLQGLDFSGNHFSGEIPSSLGNLSSLYEVFFNNN 432 (1008)
Q Consensus 353 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N 432 (1008)
+.+++++|.++ .+|..+. ++|+.|+|++|+|++..|..|..+++|++|+|++|+|++..+..|.++++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 45666666665 5565553 67777777777777777777888888888888888888665566788888888888888
Q ss_pred ccccccCCCCcCCCcccEeecccccccCCcchhh
Q 045798 433 NLSGVIPFSLGNLKRLAFLEMSGNELSGTIPEDI 466 (1008)
Q Consensus 433 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~~~ 466 (1008)
+|++..+..|..+++|+.|+|++|.+. ..|..+
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~-c~~~~~ 124 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWD-CECRDI 124 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBC-TTBGGG
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcc-cccccH
Confidence 888766667888999999999999987 444433
No 399
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.37 E-value=1.3e-12 Score=129.01 Aligned_cols=104 Identities=23% Similarity=0.264 Sum_probs=63.0
Q ss_pred EEEeccccCCCCccCcCccCCccCCeeeecCCCCCCCCCccccCCCCCCEEEccCCCCCCccCcccccCcCcceEeeecc
Q 045798 57 TALDLMSKSLSGSLSPHLGNLSFLREINLSNNTIQGEIPPEFGRLFRLEALFLSNNSLVGKIPANLSYCSRLTVLCIEYN 136 (1008)
Q Consensus 57 ~~l~l~~~~l~~~l~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n 136 (1008)
+.++++++.++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 35666666664 5555553 56666666666666666666666666666666666666544444556666666666666
Q ss_pred ccccCCCccccccCCCCeeecccccCC
Q 045798 137 KLQGRIPLEFVSLSKLKDLSLAKNKLT 163 (1008)
Q Consensus 137 ~l~~~~p~~~~~l~~L~~L~L~~n~l~ 163 (1008)
+|++..+..|..+++|++|+|++|.+.
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcc
Confidence 666444444555666666666666555
No 400
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.28 E-value=9.2e-14 Score=154.89 Aligned_cols=140 Identities=14% Similarity=0.161 Sum_probs=74.2
Q ss_pred CCCceEEccCCccccccccccc-CCCCcceeeccccccccccCCCC-----cCCCcccEeecccccccCCcchhhhhhhh
Q 045798 398 QKLQGLDFSGNHFSGEIPSSLG-NLSSLYEVFFNNNNLSGVIPFSL-----GNLKRLAFLEMSGNELSGTIPEDIFNISY 471 (1008)
Q Consensus 398 ~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~l~~N~l~~~~p~~~-----~~l~~L~~L~Ls~N~l~~~lp~~~~~~~~ 471 (1008)
++|+.|+|++|.++......+. .+++|+.|+|++|.++......+ ...++|+.|+|++|.|+.. ...
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~---~~~---- 173 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAA---GVA---- 173 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHH---HHH----
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChH---HHH----
Confidence 4555555655555432222221 23445555555555543222222 1235566666666666410 000
Q ss_pred hhhhhcccCccccCCCcccccccccccccccccccccCC----CCcccccccccceeeccCcccccc----hhhhhhccc
Q 045798 472 LSNSLNLARNHLVGIIPPRIGNLRALRSFDVSNNDLSGE----IPIELGHCSSLEEIYLAGNLFHGS----IPSFFNALK 543 (1008)
Q Consensus 472 ~~~~L~L~~N~l~~~~p~~~~~l~~L~~Ldls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~ 543 (1008)
.++..+..+++|++|||++|.+++. ++..+..+++|++|+|++|.|+.. ++..+...+
T Consensus 174 --------------~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~ 239 (372)
T 3un9_A 174 --------------VLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHP 239 (372)
T ss_dssp --------------HHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCS
T ss_pred --------------HHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCC
Confidence 1233344556677777777776532 244455566777777777777643 334455567
Q ss_pred cccEEecCCCccccc
Q 045798 544 GVQKIDLSRNNLSGQ 558 (1008)
Q Consensus 544 ~L~~L~ls~N~l~~~ 558 (1008)
+|+.|||++|.|+..
T Consensus 240 ~L~~L~Ls~N~i~~~ 254 (372)
T 3un9_A 240 SLELLHLYFNELSSE 254 (372)
T ss_dssp SCCEEECTTSSCCHH
T ss_pred CCCEEeccCCCCCHH
Confidence 777777777777643
No 401
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.27 E-value=8.8e-11 Score=132.79 Aligned_cols=133 Identities=11% Similarity=0.200 Sum_probs=63.3
Q ss_pred cchhccCCCCCceEEccCCcccccccccccCCCCcceeeccccccccccCCCCcCCCcccEeecccccccCCcchhhhhh
Q 045798 390 IPKEMGKLQKLQGLDFSGNHFSGEIPSSLGNLSSLYEVFFNNNNLSGVIPFSLGNLKRLAFLEMSGNELSGTIPEDIFNI 469 (1008)
Q Consensus 390 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~~~~~~ 469 (1008)
....|.++.+|+.+.+..+... .....|.+++.|+.+.+. +.+..+...+|.++.+|+.++|..+ ++ .
T Consensus 257 ~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~-~-------- 324 (394)
T 4gt6_A 257 ETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-IT-Q-------- 324 (394)
T ss_dssp CTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CC-E--------
T ss_pred ccceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-cc-E--------
Confidence 3445556666666666554433 344455566666666664 3344344555666666666655432 22 1
Q ss_pred hhhhhhhcccCccccCCCcccccccccccccccccccccCCCCcccccccccceeeccCcccccchhhhhhccccccEEe
Q 045798 470 SYLSNSLNLARNHLVGIIPPRIGNLRALRSFDVSNNDLSGEIPIELGHCSSLEEIYLAGNLFHGSIPSFFNALKGVQKID 549 (1008)
Q Consensus 470 ~~~~~~L~L~~N~l~~~~p~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 549 (1008)
+-..+|.++.+|+.+.+..+ ++..-...|.+|++|+.+++.+|... + ..|....+|+.+.
T Consensus 325 ----------------I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~--~-~~~~~~~~L~~i~ 384 (394)
T 4gt6_A 325 ----------------ILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQ--W-NAISTDSGLQNLP 384 (394)
T ss_dssp ----------------ECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHH--H-HTCBCCCCC----
T ss_pred ----------------ehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceee--h-hhhhccCCCCEEE
Confidence 22234555556666666433 43233345555666666666555432 1 3444555555555
Q ss_pred cCCCc
Q 045798 550 LSRNN 554 (1008)
Q Consensus 550 ls~N~ 554 (1008)
+..|.
T Consensus 385 i~~~~ 389 (394)
T 4gt6_A 385 VAPGS 389 (394)
T ss_dssp -----
T ss_pred eCCCC
Confidence 55443
No 402
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.25 E-value=1.6e-10 Score=130.63 Aligned_cols=84 Identities=12% Similarity=0.143 Sum_probs=43.7
Q ss_pred ccccccccceEEecCccccCCcchhccCCCCCceEEccCCcccccccccccCCCCcceeeccccccccccCCCCcCCCcc
Q 045798 369 GIGNLVDLYLLGMVENQFTGAIPKEMGKLQKLQGLDFSGNHFSGEIPSSLGNLSSLYEVFFNNNNLSGVIPFSLGNLKRL 448 (1008)
Q Consensus 369 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L 448 (1008)
.|.++..|+.+.+.++... +....|.++++|+.+.+. +.++......|.++.+|+.+.|..+ ++.+-..+|.++.+|
T Consensus 260 aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L 336 (394)
T 4gt6_A 260 AFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQL 336 (394)
T ss_dssp TTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTC
T ss_pred eeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCC
Confidence 3444555555555433222 344455555666666664 3344333445556666666666543 443445566666666
Q ss_pred cEeeccc
Q 045798 449 AFLEMSG 455 (1008)
Q Consensus 449 ~~L~Ls~ 455 (1008)
+.+.+..
T Consensus 337 ~~i~ip~ 343 (394)
T 4gt6_A 337 ERIAIPS 343 (394)
T ss_dssp CEEEECT
T ss_pred CEEEECc
Confidence 6666543
No 403
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.24 E-value=1.4e-11 Score=136.91 Aligned_cols=108 Identities=25% Similarity=0.296 Sum_probs=85.1
Q ss_pred CCcccceEEcCCCCeEEEEecccc-CCCCccCcCccCCccCCeeeecC-CCCCCCCCccccCCCCCCEEEccCCCCCCcc
Q 045798 41 FCEWEGITCGRRHRRVTALDLMSK-SLSGSLSPHLGNLSFLREINLSN-NTIQGEIPPEFGRLFRLEALFLSNNSLVGKI 118 (1008)
Q Consensus 41 ~c~w~gv~c~~~~~~v~~l~l~~~-~l~~~l~~~l~~l~~L~~L~L~~-n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~ 118 (1008)
.|.|.+|.|. ++ +++ .+|. +..+++|++|+|++ |.|++..+..|.+|++|++|+|++|+|++..
T Consensus 7 ~C~~~~v~~~------------~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 72 (347)
T 2ifg_A 7 PHGSSGLRCT------------RDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVA 72 (347)
T ss_dssp CSSSSCEECC------------SSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEEC
T ss_pred cccCCEEEcC------------CCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeC
Confidence 4888777774 33 566 4777 88888899999986 8888777788888888888888888888888
Q ss_pred CcccccCcCcceEeeeccccccCCCccccccCCCCeeecccccCC
Q 045798 119 PANLSYCSRLTVLCIEYNKLQGRIPLEFVSLSKLKDLSLAKNKLT 163 (1008)
Q Consensus 119 p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~ 163 (1008)
|..|++|++|++|+|++|+|++..+..|..++ |+.|+|++|.+.
T Consensus 73 ~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 73 PDAFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp TTGGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred HHHhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 88888888888888888888866555665555 888888888776
No 404
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.22 E-value=1e-13 Score=154.55 Aligned_cols=134 Identities=14% Similarity=0.091 Sum_probs=64.6
Q ss_pred CCCCEEEccCCCCCCccCcccccC-----cCcceEeeeccccccCCCcccc-ccCCCCeeecccccCCCCCCCCC-----
Q 045798 102 FRLEALFLSNNSLVGKIPANLSYC-----SRLTVLCIEYNKLQGRIPLEFV-SLSKLKDLSLAKNKLTGGIPPFL----- 170 (1008)
Q Consensus 102 ~~L~~L~Ls~n~l~~~~p~~l~~l-----~~L~~L~Ls~n~l~~~~p~~~~-~l~~L~~L~L~~n~l~~~~~~~~----- 170 (1008)
++|++|+|++|.++......+..+ ++|++|+|++|.++......+. .+++|++|+|++|.|+......+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 456666666666654333333322 4566666666665433222222 24455666666665543222222
Q ss_pred ccccccchhhcccccCCC----CCCccccCCCCCcEEEecCCccccc----CCccccCCCCcceecccccccc
Q 045798 171 GNLTSLEVLSLAGNSFGR----NIPDSLGQLKQLKILAIGGNNLSGP----IPPSIYNLSFLVVFSVSHNQIH 235 (1008)
Q Consensus 171 ~~l~~L~~L~L~~n~l~~----~~~~~~~~l~~L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~ls~N~l~ 235 (1008)
...++|++|+|++|.++. .++..+..+++|++|+|++|.|++. +...+...++|+.|+|++|.|+
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~ 224 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAG 224 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCC
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCC
Confidence 123445555555555532 1223334555566666666655432 1334444455555555555554
No 405
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.19 E-value=5.2e-11 Score=132.30 Aligned_cols=104 Identities=17% Similarity=0.138 Sum_probs=87.3
Q ss_pred eeeeccc-cccCCCCCccccccccceEEecC-ccccCCcchhccCCCCCceEEccCCcccccccccccCCCCcceeeccc
Q 045798 354 ILILSSN-QFYGSIPLGIGNLVDLYLLGMVE-NQFTGAIPKEMGKLQKLQGLDFSGNHFSGEIPSSLGNLSSLYEVFFNN 431 (1008)
Q Consensus 354 ~L~Ls~N-~l~~~~p~~~~~l~~L~~L~L~~-n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~ 431 (1008)
.++++++ .++ .+|. +..+.+|+.|+|++ |+|++..+..|..+++|+.|+|++|+|++..|..|.+|++|+.|+|++
T Consensus 12 ~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 4577777 777 5777 88888888888886 888888788899999999999999999988888889999999999999
Q ss_pred cccccccCCCCcCCCcccEeecccccccC
Q 045798 432 NNLSGVIPFSLGNLKRLAFLEMSGNELSG 460 (1008)
Q Consensus 432 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 460 (1008)
|+|++..+..|..++ |+.|+|++|.+..
T Consensus 90 N~l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 90 NALESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp SCCSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred CccceeCHHHcccCC-ceEEEeeCCCccC
Confidence 999877777777666 9999999999874
No 406
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.18 E-value=4.1e-11 Score=127.38 Aligned_cols=147 Identities=15% Similarity=0.077 Sum_probs=113.0
Q ss_pred HHHHhcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhhc-CCCCceeeeeccccccccC
Q 045798 679 LLKATNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKNI-RHRNLVKVITSCSSIDFQG 757 (1008)
Q Consensus 679 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 757 (1008)
+.....+|++...++.|+.+.||++.. .++.+++|+...........+.+|+++++.+ .+..+.++++++ ..
T Consensus 9 l~~~l~~~~~~~~~~g~s~~~v~~~~~--~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~-----~~ 81 (263)
T 3tm0_A 9 LKKLIEKYRCVKDTEGMSPAKVYKLVG--ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFE-----RH 81 (263)
T ss_dssp HHHHHTTSEEEECCSCCSSSEEEEEEC--SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEE-----EE
T ss_pred HHHHhccceeEeeccCCCCCeEEEEEC--CCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEE-----ec
Confidence 344567898889999999999999976 4689999998753223345689999999998 467788888874 34
Q ss_pred CceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCC---------------------
Q 045798 758 NDFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHC--------------------- 816 (1008)
Q Consensus 758 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~--------------------- 816 (1008)
.+..|+||||++|.+|.+..... .....++.+++++++.||+..
T Consensus 82 ~~~~~lv~e~i~G~~l~~~~~~~---------------~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~ 146 (263)
T 3tm0_A 82 DGWSNLLMSEADGVLCSEEYEDE---------------QSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLL 146 (263)
T ss_dssp TTEEEEEEECCSSEEHHHHCCTT---------------TCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHH
T ss_pred CCceEEEEEecCCeehhhccCCc---------------ccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHH
Confidence 56689999999999998764211 123468899999999999821
Q ss_pred -----------------------------------CCCceeccCCCCCeeecCCCCeEEcccCccc
Q 045798 817 -----------------------------------QEPILHCDLKPSNILLDNDLSGHIGDFGLAR 847 (1008)
Q Consensus 817 -----------------------------------~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~ 847 (1008)
+..++|||++|.||+++++..+.|+||+.+.
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 147 NNDLADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp HTTCSCCSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred hccccccccccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 1358999999999999876566799999875
No 407
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=98.96 E-value=6.6e-10 Score=117.97 Aligned_cols=138 Identities=17% Similarity=0.082 Sum_probs=97.5
Q ss_pred hcCCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhhcCCCC--ceeeeeccccccccCCce
Q 045798 683 TNGFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKNIRHRN--LVKVITSCSSIDFQGNDF 760 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~~~~~~~~~~~~~~~~ 760 (1008)
..+|.+....+.|..+.||++.. .+|+.+++|+.... ....+.+|+++++.+.+.+ +.++++++ ..++.
T Consensus 19 ~~~~~~~~~~~gg~~~~v~~~~~-~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~-----~~~~~ 89 (264)
T 1nd4_A 19 LFGYDWAQQTIGCSDAAVFRLSA-QGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVV-----TEAGR 89 (264)
T ss_dssp TTTCEEEECSCTTSSCEEEEEEC-TTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEE-----ECSSC
T ss_pred cCCCceEecccCCCCceEEEEec-CCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEec-----cCCCC
Confidence 34455433334556699999975 46788999997643 2356789999999985444 45577763 33456
Q ss_pred EEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCC------------------------
Q 045798 761 KAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHC------------------------ 816 (1008)
Q Consensus 761 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~------------------------ 816 (1008)
.++||||++|.++. ... .. ...++.+++..++.||+..
T Consensus 90 ~~~v~e~i~G~~l~--~~~-------------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (264)
T 1nd4_A 90 DWLLLGEVPGQDLL--SSH-------------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAG 151 (264)
T ss_dssp EEEEEECCSSEETT--TSC-------------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTT
T ss_pred CEEEEEecCCcccC--cCc-------------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcC
Confidence 89999999998884 211 11 1256778888888888742
Q ss_pred -------------------------------CCCceeccCCCCCeeecCCCCeEEcccCccc
Q 045798 817 -------------------------------QEPILHCDLKPSNILLDNDLSGHIGDFGLAR 847 (1008)
Q Consensus 817 -------------------------------~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~ 847 (1008)
+..++|||++|.||++++++.+.|+|||.+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 152 LVDQDDLDEEHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp CCCTTSCCGGGTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred CccchhhhhhccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 1129999999999999877667799999875
No 408
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.86 E-value=6.8e-09 Score=115.64 Aligned_cols=147 Identities=13% Similarity=0.144 Sum_probs=106.9
Q ss_pred CCCceEeeccCeeEEEEEEcCCCeEEEEEEec--cccc-hhhHHHHHHHHHHhhcC--CCCceeeeeccccccccCCceE
Q 045798 687 SSTHLIGVGSFGCVYKGALDEDGIVVAIKVIN--LQCE-GASKSFMAECKALKNIR--HRNLVKVITSCSSIDFQGNDFK 761 (1008)
Q Consensus 687 ~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~--~~~~-~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~~~~~~ 761 (1008)
..++.++.|.++.||++... +..+++|+.. .... .....+.+|+++++.+. +..+.+++.++.... ..+..
T Consensus 41 ~~~~~l~~G~sn~~y~v~~~--~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~--~~g~~ 116 (359)
T 3dxp_A 41 LSVEQFKGGQSNPTFKLVTP--GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDES--VIGRA 116 (359)
T ss_dssp CEEEECCC-CCSCEEEEECS--SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTT--TTSSC
T ss_pred ceEEEcCCcccceEEEEEEC--CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCC--ccCCe
Confidence 34678999999999998873 4678899875 3221 22357889999999996 455778888764321 12457
Q ss_pred EEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCC-------------------------
Q 045798 762 AIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHC------------------------- 816 (1008)
Q Consensus 762 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~------------------------- 816 (1008)
++||||++|..+.+.... .++..++..++.+++.+|+.||+..
T Consensus 117 ~~vme~v~G~~l~~~~~~------------~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (359)
T 3dxp_A 117 FYIMEFVSGRVLWDQSLP------------GMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTK 184 (359)
T ss_dssp EEEEECCCCBCCCCTTCT------------TCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHH
T ss_pred EEEEEecCCeecCCCccc------------cCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHH
Confidence 899999998877542110 4677888999999999999999731
Q ss_pred ------------------------------CCCceeccCCCCCeeecCCCC--eEEcccCccccc
Q 045798 817 ------------------------------QEPILHCDLKPSNILLDNDLS--GHIGDFGLARFH 849 (1008)
Q Consensus 817 ------------------------------~~~ivH~Dlkp~NIll~~~~~--~kL~Dfg~a~~~ 849 (1008)
...++|||++|.||+++.++. +.|+||+.+..-
T Consensus 185 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g 249 (359)
T 3dxp_A 185 QYKLSETESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLG 249 (359)
T ss_dssp HHHHHCCSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEE
T ss_pred HHHhcCCcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccC
Confidence 247999999999999987753 689999998743
No 409
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.86 E-value=8.9e-10 Score=121.46 Aligned_cols=165 Identities=13% Similarity=0.130 Sum_probs=92.9
Q ss_pred cchhccCCCCCceEEccCCcccccccccccCCCCcceeeccccccccccCCCCc--CCCcccEeeccc--ccccCCcchh
Q 045798 390 IPKEMGKLQKLQGLDFSGNHFSGEIPSSLGNLSSLYEVFFNNNNLSGVIPFSLG--NLKRLAFLEMSG--NELSGTIPED 465 (1008)
Q Consensus 390 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~--~l~~L~~L~Ls~--N~l~~~lp~~ 465 (1008)
+...+..+++|+.|+|++|.-. .++. + .+++|+.|+|..|.+.......+. .+++|+.|+|+. |...|.. .
T Consensus 164 L~~ll~~~P~L~~L~L~g~~~l-~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~--~ 238 (362)
T 2ra8_A 164 LSPVLDAMPLLNNLKIKGTNNL-SIGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDG--D 238 (362)
T ss_dssp CHHHHHTCTTCCEEEEECCBTC-BCCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCS--C
T ss_pred HHHHHhcCCCCcEEEEeCCCCc-eecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccch--h
Confidence 4455667778888888777311 2233 3 267777888777776543333333 567788887753 2221110 0
Q ss_pred hhhhhhhhhhhcccCccccCCCcccc--cccccccccccccccccCCCCcccc---cccccceeeccCcccccc----hh
Q 045798 466 IFNISYLSNSLNLARNHLVGIIPPRI--GNLRALRSFDVSNNDLSGEIPIELG---HCSSLEEIYLAGNLFHGS----IP 536 (1008)
Q Consensus 466 ~~~~~~~~~~L~L~~N~l~~~~p~~~--~~l~~L~~Ldls~N~l~~~~p~~~~---~l~~L~~L~L~~N~l~~~----~p 536 (1008)
+.. +...+ ..+++|++|+|++|.+.+..+..+. .+++|++|+|+.|.|.+. ++
T Consensus 239 ~~~------------------l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~ 300 (362)
T 2ra8_A 239 MNV------------------FRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLL 300 (362)
T ss_dssp GGG------------------TGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHH
T ss_pred HHH------------------HHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHH
Confidence 000 00111 2467788888888777643333332 467888888888888753 34
Q ss_pred hhhhccccccEEecCCCcccccccCcccccccceeecccCc
Q 045798 537 SFFNALKGVQKIDLSRNNLSGQIPIFLEALSLEYLNLSFND 577 (1008)
Q Consensus 537 ~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~L~~L~l~~N~ 577 (1008)
..+..+++|+.|+|++|.++...-....-.-...+++++|.
T Consensus 301 ~~L~~l~~L~~L~L~~n~i~d~~~~~l~~alg~~~~~~~~~ 341 (362)
T 2ra8_A 301 DHVDKIKHLKFINMKYNYLSDEMKKELQKSLPMKIDVSDSQ 341 (362)
T ss_dssp TTHHHHTTCSEEECCSBBCCHHHHHHHHHHCCSEEECCSBC
T ss_pred hhcccCCcceEEECCCCcCCHHHHHHHHHHcCCEEEecCCc
Confidence 44456788888888888776432111110012456777665
No 410
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.85 E-value=4.5e-08 Score=109.91 Aligned_cols=304 Identities=10% Similarity=0.060 Sum_probs=143.3
Q ss_pred CCCccccccchhhcccccCCCCCCccccCCCCCcEEEecCCcccccCCccccCCCCcceeccccccccccCChhhhhcCC
Q 045798 168 PFLGNLTSLEVLSLAGNSFGRNIPDSLGQLKQLKILAIGGNNLSGPIPPSIYNLSFLVVFSVSHNQIHGSLPPSLGLLLP 247 (1008)
Q Consensus 168 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~lp~~~~~~l~ 247 (1008)
+++....+|+.+.+.. .++.....+|.++.+|+.+.|..+ ++.+...+|.++ +|+.+.+..+ ++ .++...|.. .
T Consensus 40 ~~~~~~~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~-~I~~~aF~~-~ 113 (379)
T 4h09_A 40 PWYKDRDRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VK-KFGDYVFQG-T 113 (379)
T ss_dssp TTGGGGGGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CC-EECTTTTTT-C
T ss_pred cccccccCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-ee-Eeccceecc-C
Confidence 3455566777777754 355555667777777877777644 555666667665 4666555433 33 444444443 2
Q ss_pred CCcEEEeccccCCCCCCcccccCCCCceeecccccccccccccccCCCcccccccccccCCCCCCCcccccccccccCCC
Q 045798 248 NLKFFQIHHNFFSGSIPISLSNASKLEHIEIANNNFSGKLSVNFGGMKNLSLLNLQFSNLGSGESDEMGFMNSLTNCSKL 327 (1008)
Q Consensus 248 ~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~l~~L 327 (1008)
+|+.+.+..+... ....+|.+. +|+.+.+..+ +..+.... +..+..+
T Consensus 114 ~L~~i~lp~~~~~-i~~~~F~~~-~l~~~~~~~~-v~~i~~~~------------------------------f~~~~~l 160 (379)
T 4h09_A 114 DLDDFEFPGATTE-IGNYIFYNS-SVKRIVIPKS-VTTIKDGI------------------------------GYKAENL 160 (379)
T ss_dssp CCSEEECCTTCCE-ECTTTTTTC-CCCEEEECTT-CCEECSCT------------------------------TTTCTTC
T ss_pred CcccccCCCcccc-ccccccccc-eeeeeeccce-eeccccch------------------------------hcccccc
Confidence 5555555543221 222222222 3333333221 22222223 3344444
Q ss_pred cEEEecCCcCCccCChhhhhhcccceeeeeccccccCCCCCccccccccceEEecCccccCCcchhccCCCCCceEEccC
Q 045798 328 RVLSLGGNQFRGALPHSIANLSSQLQILILSSNQFYGSIPLGIGNLVDLYLLGMVENQFTGAIPKEMGKLQKLQGLDFSG 407 (1008)
Q Consensus 328 ~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 407 (1008)
+.+.+..+...... ..... .+... .....+.....+..+.+.... .......+....+|+.+.+..
T Consensus 161 ~~~~~~~~~~~~~~-~~~~~-----------~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~i~~~~f~~~~~l~~i~~~~ 226 (379)
T 4h09_A 161 EKIEVSSNNKNYVA-ENYVL-----------YNKNK-TILESYPAAKTGTEFTIPSTV-KTVTAYGFSYGKNLKKITITS 226 (379)
T ss_dssp CEEEECTTCSSEEE-ETTEE-----------EETTS-SEEEECCTTCCCSEEECCTTC-CEECTTTTTTCSSCSEEECCT
T ss_pred cccccccccceeec-cccee-----------ccccc-ceeccccccccccccccccce-eEEeecccccccccceeeecc
Confidence 44444433222000 00000 00000 011112222223333222211 112334444555566665544
Q ss_pred CcccccccccccCCCCcceeeccccccccccCCCCcCCCcccEeecccccccCCcchhhhhhhhhhhhhcccCccccCCC
Q 045798 408 NHFSGEIPSSLGNLSSLYEVFFNNNNLSGVIPFSLGNLKRLAFLEMSGNELSGTIPEDIFNISYLSNSLNLARNHLVGII 487 (1008)
Q Consensus 408 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~~~~~~~~~~~~L~L~~N~l~~~~ 487 (1008)
+ +.......|.+...|+.+.+..+ ++.+-..+|.++.+|+.+.+..+ ++ .+ -
T Consensus 227 ~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~-~i------------------------~ 278 (379)
T 4h09_A 227 G-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VK-TV------------------------P 278 (379)
T ss_dssp T-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CS-EE------------------------C
T ss_pred c-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ce-ec------------------------c
Confidence 4 22233445555666666666544 44344555666666666665432 22 12 2
Q ss_pred cccccccccccccccccccccCCCCcccccccccceeeccCcccccchhhhhhccccccEEecCCC
Q 045798 488 PPRIGNLRALRSFDVSNNDLSGEIPIELGHCSSLEEIYLAGNLFHGSIPSFFNALKGVQKIDLSRN 553 (1008)
Q Consensus 488 p~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N 553 (1008)
...|.++.+|+.+++.++.++..-...|.+|.+|+.+.|..+ ++..-...|.++++|+.+.+..+
T Consensus 279 ~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~ 343 (379)
T 4h09_A 279 YLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS 343 (379)
T ss_dssp TTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT
T ss_pred ccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc
Confidence 234555666666666666555334455666666666666544 44333456666677776666544
No 411
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.85 E-value=4.1e-10 Score=124.11 Aligned_cols=206 Identities=14% Similarity=0.167 Sum_probs=113.9
Q ss_pred CeEEEEeccccCCCC-c-------cCcCccCCccCCeeeecCCCCC---------CCCCccccCCCCCCEEEccCCCCCC
Q 045798 54 RRVTALDLMSKSLSG-S-------LSPHLGNLSFLREINLSNNTIQ---------GEIPPEFGRLFRLEALFLSNNSLVG 116 (1008)
Q Consensus 54 ~~v~~l~l~~~~l~~-~-------l~~~l~~l~~L~~L~L~~n~~~---------~~~p~~~~~l~~L~~L~Ls~n~l~~ 116 (1008)
.+|+.|.+......| . +..++..+++|+.|.+.++... +.+...+..+++|+.|+|++|.-.
T Consensus 107 ~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l- 185 (362)
T 2ra8_A 107 PSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL- 185 (362)
T ss_dssp GGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-
T ss_pred hhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-
Confidence 457777776554442 1 2344566788888888664331 123334456677777777776311
Q ss_pred ccCcccccCcCcceEeeeccccccCCCcccc--ccCCCCeeeccc--ccCCCCCCCCCccccccchhhcccccCCCCCCc
Q 045798 117 KIPANLSYCSRLTVLCIEYNKLQGRIPLEFV--SLSKLKDLSLAK--NKLTGGIPPFLGNLTSLEVLSLAGNSFGRNIPD 192 (1008)
Q Consensus 117 ~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~--~l~~L~~L~L~~--n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 192 (1008)
.++. +. +++|++|+|..|.+.......+. .+++|++|+|+. |...+. ..+ ..|. .
T Consensus 186 ~l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~--~~~---~~l~--------------~ 244 (362)
T 2ra8_A 186 SIGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFD--GDM---NVFR--------------P 244 (362)
T ss_dssp BCCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCC--SCG---GGTG--------------G
T ss_pred eecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccc--hhH---HHHH--------------H
Confidence 2222 32 66777777777766543333333 466777776642 111110 001 0111 0
Q ss_pred cc--cCCCCCcEEEecCCcccccCCcccc---CCCCcceeccccccccccCChhhh---hcCCCCcEEEeccccCCCCCC
Q 045798 193 SL--GQLKQLKILAIGGNNLSGPIPPSIY---NLSFLVVFSVSHNQIHGSLPPSLG---LLLPNLKFFQIHHNFFSGSIP 264 (1008)
Q Consensus 193 ~~--~~l~~L~~L~L~~n~l~~~~~~~~~---~l~~L~~L~ls~N~l~~~lp~~~~---~~l~~L~~L~L~~N~l~~~~p 264 (1008)
.+ ..+++|+.|+|++|.+....+..+. .+++|++|+|+.|.+.+.....+. ..+++|+.|+|++|.++...-
T Consensus 245 ~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~ 324 (362)
T 2ra8_A 245 LFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMK 324 (362)
T ss_dssp GSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHH
T ss_pred HHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHH
Confidence 11 2467788888888777643322222 467888888888887753332332 236788888888888775433
Q ss_pred cccccCCCCceeeccccc
Q 045798 265 ISLSNASKLEHIEIANNN 282 (1008)
Q Consensus 265 ~~l~~l~~L~~L~L~~N~ 282 (1008)
..+...- ...++++.++
T Consensus 325 ~~l~~al-g~~~~~~~~~ 341 (362)
T 2ra8_A 325 KELQKSL-PMKIDVSDSQ 341 (362)
T ss_dssp HHHHHHC-CSEEECCSBC
T ss_pred HHHHHHc-CCEEEecCCc
Confidence 3333311 3557888776
No 412
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.84 E-value=1.1e-07 Score=106.70 Aligned_cols=128 Identities=9% Similarity=0.060 Sum_probs=72.4
Q ss_pred CccCCccCCeeeecCCCCCCCCCccccCCCCCCEEEccCCCCCCccCcccccCcCcceEeeeccccccCCCccccccCCC
Q 045798 73 HLGNLSFLREINLSNNTIQGEIPPEFGRLFRLEALFLSNNSLVGKIPANLSYCSRLTVLCIEYNKLQGRIPLEFVSLSKL 152 (1008)
Q Consensus 73 ~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L 152 (1008)
++....+|+.+.+.. .++.+-..+|.++.+|+.++|..+ ++.....+|.++ +|+.+.+..+ ++.+...+|.. .+|
T Consensus 41 ~~~~~~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~-~~L 115 (379)
T 4h09_A 41 WYKDRDRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG-TDL 115 (379)
T ss_dssp TGGGGGGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTT-CCC
T ss_pred ccccccCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceecc-CCc
Confidence 445566788888865 455455667888888888888654 654556667776 5777766543 44344445544 367
Q ss_pred CeeecccccCCCCCCCCCccccccchhhcccccCCCCCCccccCCCCCcEEEecCC
Q 045798 153 KDLSLAKNKLTGGIPPFLGNLTSLEVLSLAGNSFGRNIPDSLGQLKQLKILAIGGN 208 (1008)
Q Consensus 153 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 208 (1008)
+.+.+..+- +......|.+. +|+.+.+..+ ++.....+|..+..++.+.+..+
T Consensus 116 ~~i~lp~~~-~~i~~~~F~~~-~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~ 168 (379)
T 4h09_A 116 DDFEFPGAT-TEIGNYIFYNS-SVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSN 168 (379)
T ss_dssp SEEECCTTC-CEECTTTTTTC-CCCEEEECTT-CCEECSCTTTTCTTCCEEEECTT
T ss_pred ccccCCCcc-ccccccccccc-eeeeeeccce-eeccccchhcccccccccccccc
Confidence 777776542 21333344432 3444443322 33334445555556655555543
No 413
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.81 E-value=1.7e-09 Score=117.47 Aligned_cols=192 Identities=16% Similarity=0.111 Sum_probs=122.4
Q ss_pred CceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhhc-CCCC--ceeeeeccccccccCCceEEEEE
Q 045798 689 THLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKNI-RHRN--LVKVITSCSSIDFQGNDFKAIVY 765 (1008)
Q Consensus 689 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~n--iv~~~~~~~~~~~~~~~~~~lv~ 765 (1008)
++.++.|.+..||++. ..+++|+.... .....+.+|+++++.+ .+.. +.+++..+.. ...-...|+||
T Consensus 25 i~~~~~G~~n~v~~v~-----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~--~~~~~~~~~vm 95 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN-----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMP--SETYQMSFAGF 95 (304)
T ss_dssp CCEEEECSSEEEEEST-----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCC--CSSCSCSCEEE
T ss_pred eEecCCCCcceEEEEC-----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCC--CCCCCcceEEE
Confidence 4679999999999863 45889986432 3456789999999888 3332 3444444221 11112357899
Q ss_pred eccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCC-----------------------------
Q 045798 766 EYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHC----------------------------- 816 (1008)
Q Consensus 766 e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~----------------------------- 816 (1008)
|+++|.++.+... ..++..++..++.+++..++.||+..
T Consensus 96 ~~i~G~~l~~~~~------------~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (304)
T 3sg8_A 96 TKIKGVPLTPLLL------------NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSR 163 (304)
T ss_dssp ECCCCEECCHHHH------------HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTT
T ss_pred cccCCeECCcccc------------ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcc
Confidence 9999988765321 14677788888888888888888621
Q ss_pred --------------------------CCCceeccCCCCCeeecC--CCCeEEcccCcccccccccCcccccc--------
Q 045798 817 --------------------------QEPILHCDLKPSNILLDN--DLSGHIGDFGLARFHQEVSNSTLSSS-------- 860 (1008)
Q Consensus 817 --------------------------~~~ivH~Dlkp~NIll~~--~~~~kL~Dfg~a~~~~~~~~~~~~~~-------- 860 (1008)
...++|+|++|.||++++ +..+.++||+.+..-....+......
T Consensus 164 ~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~ 243 (304)
T 3sg8_A 164 ELKGPQMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGME 243 (304)
T ss_dssp TSCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHH
T ss_pred cCCcccHHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHH
Confidence 135799999999999998 45678999999875332111100000
Q ss_pred --ccccccccccC-ccccCCCCCCcccchhhHHHHHHHHHhCCCCC
Q 045798 861 --VGVKGTIGYTA-PEYGLGSEVSTNGDVYSYGILLLEMVTAKKPT 903 (1008)
Q Consensus 861 --~~~~gt~~y~a-PE~~~~~~~~~~sDvwslG~vl~elltG~~pf 903 (1008)
.......++.. |+.... .....+.|++|.++|.+.+|..+|
T Consensus 244 ~~~~~l~~Y~~~~~~~~~~r--~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 244 FVSKILNHYKHKDIPTVLEK--YRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp HHHHHHHHHTCSCHHHHHHH--HHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHcCCCCcHHHHHH--HHHHHHHHHHHHHHHHHHcCCHHH
Confidence 00000111111 222111 112258999999999999999875
No 414
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.76 E-value=3.9e-11 Score=125.12 Aligned_cols=120 Identities=18% Similarity=0.133 Sum_probs=55.8
Q ss_pred CCcccceEEcCCCCeEEEEeccc---cCCCCccCc-CccCCccCCeeeecCCCCCCCCCc-cccCCCCCCE--EEccCCC
Q 045798 41 FCEWEGITCGRRHRRVTALDLMS---KSLSGSLSP-HLGNLSFLREINLSNNTIQGEIPP-EFGRLFRLEA--LFLSNNS 113 (1008)
Q Consensus 41 ~c~w~gv~c~~~~~~v~~l~l~~---~~l~~~l~~-~l~~l~~L~~L~L~~n~~~~~~p~-~~~~l~~L~~--L~Ls~n~ 113 (1008)
.|.|.|+.|+....+|+.+...+ ..+.+.+++ .+..++. .|...+|.-++.+.- .|...+.|.. ++++.|.
T Consensus 77 l~~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~--~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N~ 154 (267)
T 3rw6_A 77 LKAVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKL--IMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNR 154 (267)
T ss_dssp HHHTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHH--HHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTTS
T ss_pred HHhcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHH--HHHhccchhccccCHHHcCCCcchhhcCccccCCH
Confidence 48999999987766776655544 223333332 2222222 222333333322211 1333334443 4455553
Q ss_pred CCCccCc----ccccCcCcceEeeecccccc--CCCccccccCCCCeeecccccCC
Q 045798 114 LVGKIPA----NLSYCSRLTVLCIEYNKLQG--RIPLEFVSLSKLKDLSLAKNKLT 163 (1008)
Q Consensus 114 l~~~~p~----~l~~l~~L~~L~Ls~n~l~~--~~p~~~~~l~~L~~L~L~~n~l~ 163 (1008)
.. .++. ...++++|++|+|++|+|++ .+|..+..+++|+.|+|++|+|+
T Consensus 155 ~~-~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~ 209 (267)
T 3rw6_A 155 RS-CMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELK 209 (267)
T ss_dssp HH-HHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCC
T ss_pred HH-HHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccC
Confidence 32 1111 11344555555555555554 22344445555555555555555
No 415
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.48 E-value=6.8e-07 Score=97.49 Aligned_cols=137 Identities=16% Similarity=0.141 Sum_probs=101.1
Q ss_pred CCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhhcCC----CCceeeeeccccccccCCce
Q 045798 685 GFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKNIRH----RNLVKVITSCSSIDFQGNDF 760 (1008)
Q Consensus 685 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~~~~~~~~~~~~~~~~ 760 (1008)
.+..++.++.|....||++ +..+++|+.... .....+.+|+++++.+.+ ..+.+++++ +.
T Consensus 38 ~i~~v~~l~~G~~n~vy~v-----g~~~vlR~~~~~--~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~---------~~ 101 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC-----NEQYVVKVPKRD--SVRISQKRELELYRFLENCKLSYQIPAVVYQ---------SD 101 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE-----TTTEEEEEESSH--HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE---------CS
T ss_pred ceEEEEeCCCCCCceEEEE-----CCEEEEEeCCcH--HHHHHHHHHHHHHHHHHhcCCCCCcceEEec---------CC
Confidence 5667789999999999997 556889986432 224568999999998865 223444443 23
Q ss_pred EEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCC-----------------------
Q 045798 761 KAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQ----------------------- 817 (1008)
Q Consensus 761 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~----------------------- 817 (1008)
.++||||++|.++...... .++..++..++.+++..++.||+...
T Consensus 102 ~~lvme~i~G~~l~~~~~~------------~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (320)
T 3r70_A 102 RFNIMKYIKGERITYEQYH------------KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKK 169 (320)
T ss_dssp SCEEEECCCCBCCCHHHHT------------TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHH
T ss_pred cEEEEeecCCccccccccc------------cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHH
Confidence 5799999999888643211 45667777888888888888885422
Q ss_pred -------------------------------------CCceeccCCCCCeeecCCCCeEEcccCccccc
Q 045798 818 -------------------------------------EPILHCDLKPSNILLDNDLSGHIGDFGLARFH 849 (1008)
Q Consensus 818 -------------------------------------~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~ 849 (1008)
+.++|+|++|.||+++.+..+.++||+.+..-
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 170 LLISILEKEQLLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp HHHHHHHHTTCCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred HHHHHHhhcccccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 23499999999999998766799999998643
No 416
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.37 E-value=6.7e-08 Score=100.68 Aligned_cols=66 Identities=20% Similarity=0.195 Sum_probs=40.5
Q ss_pred cccccceeeccCccccc--chhhhhhccccccEEecCCCcccccccCccccc--ccceeecccCcccccCC
Q 045798 517 HCSSLEEIYLAGNLFHG--SIPSFFNALKGVQKIDLSRNNLSGQIPIFLEAL--SLEYLNLSFNDFEGKIP 583 (1008)
Q Consensus 517 ~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~--~L~~L~l~~N~l~g~~p 583 (1008)
++++|++|+|++|+|++ .+|..+..+++|+.|||++|+|++. .....+. .|++|+|++|.+++.+|
T Consensus 168 ~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~-~~l~~l~~l~L~~L~L~~Npl~~~~~ 237 (267)
T 3rw6_A 168 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE-RELDKIKGLKLEELWLDGNSLCDTFR 237 (267)
T ss_dssp HCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG-GGGGGGTTSCCSEEECTTSTTGGGCS
T ss_pred hCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc-hhhhhcccCCcceEEccCCcCccccC
Confidence 45666666666666665 3456666677777777777777654 1111122 67777777777776665
No 417
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.34 E-value=1e-08 Score=101.85 Aligned_cols=122 Identities=17% Similarity=0.136 Sum_probs=63.3
Q ss_pred cCcCccCCccCCeeeecCC-CCCCC----CCccccCCCCCCEEEccCCCCCCcc----CcccccCcCcceEeeecccccc
Q 045798 70 LSPHLGNLSFLREINLSNN-TIQGE----IPPEFGRLFRLEALFLSNNSLVGKI----PANLSYCSRLTVLCIEYNKLQG 140 (1008)
Q Consensus 70 l~~~l~~l~~L~~L~L~~n-~~~~~----~p~~~~~l~~L~~L~Ls~n~l~~~~----p~~l~~l~~L~~L~Ls~n~l~~ 140 (1008)
+...+...+.|++|+|++| .++.. +...+...++|++|+|++|.|.... ...+...++|++|+|++|.|..
T Consensus 28 l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~ 107 (185)
T 1io0_A 28 LKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISG 107 (185)
T ss_dssp HHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCH
T ss_pred HHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCH
Confidence 3344556667777777777 66532 2334455666777777777766322 2233344556666666666553
Q ss_pred C----CCccccccCCCCeeec--ccccCCCCCCCCCccccccchhhcccccCCCCCCccccCCCCCcEEEecCCccc
Q 045798 141 R----IPLEFVSLSKLKDLSL--AKNKLTGGIPPFLGNLTSLEVLSLAGNSFGRNIPDSLGQLKQLKILAIGGNNLS 211 (1008)
Q Consensus 141 ~----~p~~~~~l~~L~~L~L--~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 211 (1008)
. +...+...++|++|+| ++|.|+..... .+...+...++|++|+|++|.+.
T Consensus 108 ~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~--------------------~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 108 SGILALVEALQSNTSLIELRIDNQSQPLGNNVEM--------------------EIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHH--------------------HHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHH--------------------HHHHHHHhCCCcCEEeccCCCCC
Confidence 2 2223333344444444 34444311100 12234445567777777777765
No 418
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.34 E-value=1.4e-06 Score=92.70 Aligned_cols=142 Identities=16% Similarity=0.074 Sum_probs=99.4
Q ss_pred hcCCCCCceEeeccCe-eEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhhcC-CCCceeeeeccccccccCCce
Q 045798 683 TNGFSSTHLIGVGSFG-CVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKNIR-HRNLVKVITSCSSIDFQGNDF 760 (1008)
Q Consensus 683 ~~~y~~~~~lg~G~~g-~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~ 760 (1008)
..+|+. +.+..|..| .||+.....++..+++|+-.. .....+.+|+.+++.+. +--+.++++++. +++.
T Consensus 24 l~g~~~-~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~---~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~-----~~~~ 94 (272)
T 4gkh_A 24 LYGYRW-ARDNVGQSGATIYRLYGKPNAPELFLKHGKG---SVANDVTDEMVRLNWLTAFMPLPTIKHFIR-----TPDD 94 (272)
T ss_dssp HTTCEE-EEEECSSSSCEEEEEECCTTCCCEEEEEEET---HHHHHHHHHHHHHHHHTTTSCCCCEEEEEE-----ETTE
T ss_pred ccCCeE-EEccCCCcCCeEEEEEecCCCeEEEEEECCC---CCHhHHHHHHHHHHHhccCCCcCeEEEEEE-----ECCe
Confidence 344543 456667666 699988776778899998653 34567889999998883 334667777643 3456
Q ss_pred EEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCC------------------------
Q 045798 761 KAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHC------------------------ 816 (1008)
Q Consensus 761 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~------------------------ 816 (1008)
.++|||+++|.++.+..... ......++.+++..++.||...
T Consensus 95 ~~lvme~l~G~~~~~~~~~~--------------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (272)
T 4gkh_A 95 AWLLTTAIPGKTAFQVLEEY--------------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNG 160 (272)
T ss_dssp EEEEEECCCSEEHHHHHHHC--------------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTT
T ss_pred EEEEEEeeCCccccccccCC--------------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHh
Confidence 89999999998877654321 1223456666777777777421
Q ss_pred -------------------------------CCCceeccCCCCCeeecCCCCeEEcccCccc
Q 045798 817 -------------------------------QEPILHCDLKPSNILLDNDLSGHIGDFGLAR 847 (1008)
Q Consensus 817 -------------------------------~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~ 847 (1008)
...++|+|+.+.||++++++.+-|+||+.+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 161 LVDASDFDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp CCCGGGCCGGGTTCCHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred hhhhhhccccccchHHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 1237899999999999987777799999886
No 419
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.27 E-value=3.4e-06 Score=89.86 Aligned_cols=77 Identities=16% Similarity=0.137 Sum_probs=60.5
Q ss_pred CCceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhhcCCC---CceeeeeccccccccCCceEEEE
Q 045798 688 STHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKNIRHR---NLVKVITSCSSIDFQGNDFKAIV 764 (1008)
Q Consensus 688 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~~~~~~~~~~~~lv 764 (1008)
..+.|+.|.++.||++... +|+.+++|+...........+.+|++.++.+.+. .+.+++++. ..++|
T Consensus 19 ~~~~l~gG~~n~vy~v~~~-dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~---------~~~lv 88 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVELA-DGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD---------DRTLA 88 (288)
T ss_dssp EEEEEEEETTEEEEEEEET-TSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE---------TTEEE
T ss_pred ceeeeCCcchhheEEEEeC-CCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec---------CcEEE
Confidence 4578999999999999874 7889999997544333446789999999999765 577777652 25899
Q ss_pred EeccCCCChh
Q 045798 765 YEYMPNGSLE 774 (1008)
Q Consensus 765 ~e~~~~gsL~ 774 (1008)
|||++++++.
T Consensus 89 me~l~g~~~~ 98 (288)
T 3d1u_A 89 MEWVDERPPT 98 (288)
T ss_dssp EECCCCCCCC
T ss_pred EEecccCCCC
Confidence 9999998753
No 420
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.24 E-value=6.9e-08 Score=95.88 Aligned_cols=121 Identities=17% Similarity=0.094 Sum_probs=75.3
Q ss_pred CccccCCCCCCEEEccCC-CCCCc----cCcccccCcCcceEeeeccccccCC----CccccccCCCCeeecccccCCCC
Q 045798 95 PPEFGRLFRLEALFLSNN-SLVGK----IPANLSYCSRLTVLCIEYNKLQGRI----PLEFVSLSKLKDLSLAKNKLTGG 165 (1008)
Q Consensus 95 p~~~~~l~~L~~L~Ls~n-~l~~~----~p~~l~~l~~L~~L~Ls~n~l~~~~----p~~~~~l~~L~~L~L~~n~l~~~ 165 (1008)
...+...+.|++|+|++| .+... +...+...++|++|+|++|.|...- ...+...++|++|+|++|.|+..
T Consensus 29 ~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~ 108 (185)
T 1io0_A 29 KRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGS 108 (185)
T ss_dssp HHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHH
T ss_pred HHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHH
Confidence 345566778888888888 77643 2334455567777777777765322 22233334555555555555421
Q ss_pred CCCCCccccccchhhcccccCCCCCCccccCCCCCcEEEe--cCCccccc----CCccccCCCCcceecccccccc
Q 045798 166 IPPFLGNLTSLEVLSLAGNSFGRNIPDSLGQLKQLKILAI--GGNNLSGP----IPPSIYNLSFLVVFSVSHNQIH 235 (1008)
Q Consensus 166 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L--~~n~l~~~----~~~~~~~l~~L~~L~ls~N~l~ 235 (1008)
.. ..+..++...++|++|+| ++|.+... +...+...++|++|+|++|.+.
T Consensus 109 g~--------------------~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 109 GI--------------------LALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HH--------------------HHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HH--------------------HHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 10 012345566677888888 77888743 3445666789999999999986
No 421
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.20 E-value=5.2e-06 Score=89.69 Aligned_cols=137 Identities=15% Similarity=0.109 Sum_probs=94.1
Q ss_pred CceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhhcCCC---CceeeeeccccccccCCceEEEEE
Q 045798 689 THLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKNIRHR---NLVKVITSCSSIDFQGNDFKAIVY 765 (1008)
Q Consensus 689 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~~~~~~~~~~~~lv~ 765 (1008)
++.++.|....||+. +..+++|+.. .......+.+|+++++.+.+. .+.+++.++. ...+..++||
T Consensus 24 v~~l~~G~~n~v~~v-----g~~~VlR~~~--~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~----~~~g~~~~v~ 92 (306)
T 3tdw_A 24 VESLGEGFRNYAILV-----NGDWVFRFPK--SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGK----RSDGNPFVGY 92 (306)
T ss_dssp EEEEEECSSEEEEEE-----TTTEEEEEES--SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEE----CTTSCEEEEE
T ss_pred eeecCCCcceeEEEE-----CCEEEEEecC--CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecc----cCCCceEEEE
Confidence 467888999999987 4568888853 233456899999999999642 3455555532 2345578999
Q ss_pred eccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhC------------------------------
Q 045798 766 EYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHH------------------------------ 815 (1008)
Q Consensus 766 e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~------------------------------ 815 (1008)
||++|.++.+.... .++..+...++.+++..|+.||+.
T Consensus 93 e~i~G~~l~~~~~~------------~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~ 160 (306)
T 3tdw_A 93 RKVQGQILGEDGMA------------VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQV 160 (306)
T ss_dssp ECCCSEECHHHHHT------------TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHT
T ss_pred eccCCeECchhhhh------------hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhc
Confidence 99999888653211 234445555555666655555542
Q ss_pred ---------------------------CCCCceeccCCCCCeeecC---CCCe-EEcccCcccc
Q 045798 816 ---------------------------CQEPILHCDLKPSNILLDN---DLSG-HIGDFGLARF 848 (1008)
Q Consensus 816 ---------------------------~~~~ivH~Dlkp~NIll~~---~~~~-kL~Dfg~a~~ 848 (1008)
.+..++|+|++|.||+++. ++.+ .|+||+.+..
T Consensus 161 ~~~l~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 161 FPLLDESLRDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp GGGSCHHHHHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred ccccchhhHHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 1235699999999999987 4554 8999998863
No 422
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.15 E-value=9.8e-06 Score=89.59 Aligned_cols=78 Identities=9% Similarity=0.099 Sum_probs=56.6
Q ss_pred CCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhhcCCCC--ceeeeeccccccccCCceEEE
Q 045798 686 FSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKNIRHRN--LVKVITSCSSIDFQGNDFKAI 763 (1008)
Q Consensus 686 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~~~~~~~~~~~~~~~~~~l 763 (1008)
...++.++.|....+|+... ++..+++|+.... ..+.+|+.+++.+.... +.+++.++.. ..+..++
T Consensus 43 ~~~i~~l~gG~~n~~y~v~~--~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~----~~g~~~l 111 (362)
T 3ovc_A 43 VSDLMQLSEGEESRAFSFDV--GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEF----SESLTYC 111 (362)
T ss_dssp CEEEEEEEECSSEEEEEEEE--TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEES----SSSCEEE
T ss_pred CceEEECCCCCcceEEEEEE--CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccC----CCCCeEE
Confidence 34467799999999999886 5889999987532 35888999999885433 4555655322 2256799
Q ss_pred EEeccCCCChh
Q 045798 764 VYEYMPNGSLE 774 (1008)
Q Consensus 764 v~e~~~~gsL~ 774 (1008)
||||++|.++.
T Consensus 112 v~e~l~G~~l~ 122 (362)
T 3ovc_A 112 ISRRAQGVTLQ 122 (362)
T ss_dssp EEECCCSEETT
T ss_pred EEEecCCCCcc
Confidence 99999887665
No 423
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.94 E-value=1.7e-05 Score=87.83 Aligned_cols=86 Identities=6% Similarity=-0.099 Sum_probs=56.6
Q ss_pred CceE-eeccCeeEEEEEEc--C----CCeEEEEEEecccc---chhhHHHHHHHHHHhhcC-C--CCceeeeeccccccc
Q 045798 689 THLI-GVGSFGCVYKGALD--E----DGIVVAIKVINLQC---EGASKSFMAECKALKNIR-H--RNLVKVITSCSSIDF 755 (1008)
Q Consensus 689 ~~~l-g~G~~g~Vy~~~~~--~----~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h--~niv~~~~~~~~~~~ 755 (1008)
.+.| +.|....+|+.... . +++.+++|+..... ......+.+|+.+++.+. + -.+.+++.++.....
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 3567 78888999998763 1 16789999875432 111256788999888883 2 356677776433211
Q ss_pred cCCceEEEEEeccCCCChhcc
Q 045798 756 QGNDFKAIVYEYMPNGSLEKW 776 (1008)
Q Consensus 756 ~~~~~~~lv~e~~~~gsL~~~ 776 (1008)
....++||||++|..+.+.
T Consensus 105 --~g~~~~v~e~l~G~~l~~~ 123 (357)
T 3ats_A 105 --LGTPFFLMDYVEGVVPPDV 123 (357)
T ss_dssp --TSSCEEEEECCCCBCCCBT
T ss_pred --cCCceEEEEecCCCChhhc
Confidence 1346899999998887653
No 424
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.83 E-value=2.1e-06 Score=82.69 Aligned_cols=82 Identities=15% Similarity=0.066 Sum_probs=36.4
Q ss_pred cCCeeeecCCCCCCCCCccccCCCCCCEEEccCCC-CCCccCcccccC----cCcceEeeeccc-cccCCCccccccCCC
Q 045798 79 FLREINLSNNTIQGEIPPEFGRLFRLEALFLSNNS-LVGKIPANLSYC----SRLTVLCIEYNK-LQGRIPLEFVSLSKL 152 (1008)
Q Consensus 79 ~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~-l~~~~p~~l~~l----~~L~~L~Ls~n~-l~~~~p~~~~~l~~L 152 (1008)
.|++|||+++.++..--..+..+++|++|+|++|. |++..-..++.+ ++|++|+|++|. |+..--..+.++++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 45555555555543333344455555555555552 443333333332 244555555442 433222233344444
Q ss_pred Ceeecccc
Q 045798 153 KDLSLAKN 160 (1008)
Q Consensus 153 ~~L~L~~n 160 (1008)
++|+|+++
T Consensus 142 ~~L~L~~c 149 (176)
T 3e4g_A 142 KYLFLSDL 149 (176)
T ss_dssp CEEEEESC
T ss_pred CEEECCCC
Confidence 44444443
No 425
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.80 E-value=6.3e-06 Score=79.31 Aligned_cols=84 Identities=8% Similarity=0.079 Sum_probs=45.6
Q ss_pred CCCCEEEccCCCCCCccCcccccCcCcceEeeeccc-cccCCCcccccc----CCCCeeeccccc-CCCCCCCCCccccc
Q 045798 102 FRLEALFLSNNSLVGKIPANLSYCSRLTVLCIEYNK-LQGRIPLEFVSL----SKLKDLSLAKNK-LTGGIPPFLGNLTS 175 (1008)
Q Consensus 102 ~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~-l~~~~p~~~~~l----~~L~~L~L~~n~-l~~~~~~~~~~l~~ 175 (1008)
.+|++|||++|.|+...-..+..+++|++|+|++|. |++.--..++.+ ++|++|+|++|. |+...-..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 356666666666665555555666666666666663 443333333332 246666666653 55433334555666
Q ss_pred cchhhccccc
Q 045798 176 LEVLSLAGNS 185 (1008)
Q Consensus 176 L~~L~L~~n~ 185 (1008)
|++|+|++|.
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 6666666654
No 426
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.78 E-value=3.8e-05 Score=86.45 Aligned_cols=76 Identities=18% Similarity=0.111 Sum_probs=49.3
Q ss_pred CceEeeccCeeEEEEEEcCCCeEEEEEEeccccc-------hhhHHHHHHHHHHhhcCC--C-CceeeeeccccccccCC
Q 045798 689 THLIGVGSFGCVYKGALDEDGIVVAIKVINLQCE-------GASKSFMAECKALKNIRH--R-NLVKVITSCSSIDFQGN 758 (1008)
Q Consensus 689 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~E~~~l~~l~h--~-niv~~~~~~~~~~~~~~ 758 (1008)
.+.+|.|.++.||++....+++.|+||....... ...+++..|+++++.+.. + .+.+++.+ +.
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~-------d~ 107 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS-------DT 107 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE-------ET
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE-------cC
Confidence 4679999999999997655678899998653211 123567889999988732 3 34455543 12
Q ss_pred ceEEEEEeccCCC
Q 045798 759 DFKAIVYEYMPNG 771 (1008)
Q Consensus 759 ~~~~lv~e~~~~g 771 (1008)
+..++|||++++.
T Consensus 108 ~~~~lvmE~l~g~ 120 (397)
T 2olc_A 108 EMAVTVMEDLSHL 120 (397)
T ss_dssp TTTEEEECCCTTS
T ss_pred CccEEEEEeCCCc
Confidence 2358999999763
No 427
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.72 E-value=0.0002 Score=78.74 Aligned_cols=152 Identities=17% Similarity=0.124 Sum_probs=80.9
Q ss_pred ceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhhcCC--CCceeeeecccccc-ccCCceEEEEEe
Q 045798 690 HLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKNIRH--RNLVKVITSCSSID-FQGNDFKAIVYE 766 (1008)
Q Consensus 690 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~-~~~~~~~~lv~e 766 (1008)
+.|+.|..+.||++... +..+++|+.... ...+..|+.+++.+.. -.+.+++....... ...++..++|||
T Consensus 38 ~~l~gG~~n~~~~v~~~--~~~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~ 111 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTD--SGAVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYD 111 (346)
T ss_dssp EECC----CEEEEEEET--TEEEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEE
T ss_pred eeccccccCcEEEEEeC--CCCEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEE
Confidence 45666778999998873 345999998642 2334456666665521 13344443211000 123456789999
Q ss_pred ccCCCChhc--------------ccccCCC----CCCCcccccccCHHH-------------------------------
Q 045798 767 YMPNGSLEK--------------WLHPHAV----PKRDKEIEIKLTLLQ------------------------------- 797 (1008)
Q Consensus 767 ~~~~gsL~~--------------~l~~~~~----~~~~~~~~~~l~~~~------------------------------- 797 (1008)
|++|..+.. .++.... +.........-.|..
T Consensus 112 ~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 191 (346)
T 2q83_A 112 WIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQE 191 (346)
T ss_dssp CCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHH
T ss_pred eecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHH
Confidence 998866531 0111000 000000000011111
Q ss_pred HHHHHHHHHHHHHHHhh----------CCCCCceeccCCCCCeeecCCCCeEEcccCccc
Q 045798 798 RISIAIDVASALDYLHH----------HCQEPILHCDLKPSNILLDNDLSGHIGDFGLAR 847 (1008)
Q Consensus 798 ~~~i~~qi~~~L~~LH~----------~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~ 847 (1008)
...+..++..++++|++ ..+..++|||+++.||+++.++.+.++||+.+.
T Consensus 192 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 192 IDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 11122234456667763 023589999999999999888899999999875
No 428
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.53 E-value=0.00024 Score=75.78 Aligned_cols=79 Identities=15% Similarity=0.136 Sum_probs=57.5
Q ss_pred CCCCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhhcCC---CCceeeeeccccccccCCceE
Q 045798 685 GFSSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKNIRH---RNLVKVITSCSSIDFQGNDFK 761 (1008)
Q Consensus 685 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h---~niv~~~~~~~~~~~~~~~~~ 761 (1008)
...-++.+|.|..+.||+.... +|+.|++|+...........|..|++.|+.+.- -.+.+++++. ..
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l~-DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~---------~~ 85 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVELA-DGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD---------DR 85 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEET-TSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE---------TT
T ss_pred CeEEEEecCCCCCeEEEEEEEC-CCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc---------Cc
Confidence 3445678999999999999984 889999998765444445678899999998832 2345555542 13
Q ss_pred EEEEeccCCCCh
Q 045798 762 AIVYEYMPNGSL 773 (1008)
Q Consensus 762 ~lv~e~~~~gsL 773 (1008)
++||||++++..
T Consensus 86 ~lv~e~l~~~~~ 97 (288)
T 3f7w_A 86 TLAMEWVDERPP 97 (288)
T ss_dssp EEEEECCCCCCC
T ss_pred eEEEEeecccCC
Confidence 789999977654
No 429
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.45 E-value=0.00065 Score=72.75 Aligned_cols=75 Identities=13% Similarity=0.076 Sum_probs=57.6
Q ss_pred CceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhhcC---CCCceeeeeccccccccCCceEEEEE
Q 045798 689 THLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKNIR---HRNLVKVITSCSSIDFQGNDFKAIVY 765 (1008)
Q Consensus 689 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~~~~~~~~~lv~ 765 (1008)
.+.|+.|....+|+... ++..+++|+.... ....+..|++.++.+. ...+.+++.++. .++..++||
T Consensus 41 ~~~l~gG~~n~~y~v~~--~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~-----~~g~~~lvm 110 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND--EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGN-----SQGHSFLLL 110 (312)
T ss_dssp EEEECCSSSSEEEEEES--SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEE-----CSSEEEEEE
T ss_pred eEEeCCccceeeeEEEE--CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEee-----cCCceEEEE
Confidence 46799999999999876 4678889987532 3567889999998883 356777877743 235689999
Q ss_pred eccCCCCh
Q 045798 766 EYMPNGSL 773 (1008)
Q Consensus 766 e~~~~gsL 773 (1008)
||+++..+
T Consensus 111 e~l~G~~~ 118 (312)
T 3jr1_A 111 EALNKSKN 118 (312)
T ss_dssp ECCCCCCC
T ss_pred EeccCCCC
Confidence 99998765
No 430
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.35 E-value=0.0011 Score=72.06 Aligned_cols=172 Identities=11% Similarity=0.055 Sum_probs=91.9
Q ss_pred CCCCHHHHHHHhcCCCCC-----ceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhhcCCCC--ce
Q 045798 672 PKMSYKSLLKATNGFSST-----HLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKNIRHRN--LV 744 (1008)
Q Consensus 672 ~~~~~~~~~~~~~~y~~~-----~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv 744 (1008)
..++.+++......|.+. +.|+.|....+|++... +| .+++|+.... ...+.+..|+.+++.+.... +.
T Consensus 5 ~~~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~-~g-~~vlk~~~~~--~~~~~l~~e~~~l~~L~~~g~~vP 80 (322)
T 2ppq_A 5 TDITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTT-KD-PLILTLYEKR--VEKNDLPFFLGLMQHLAAKGLSCP 80 (322)
T ss_dssp CCCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEES-SC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCC
T ss_pred ccCCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeC-Cc-cEEEEEeCCC--CCHHHHHHHHHHHHHHHHCCCCCC
Confidence 346677777777777652 34667888999998874 34 6889988642 12345667888887773222 33
Q ss_pred eeeecccccc-ccCCceEEEEEeccCCCChhcc--------------cccCCC--CCCCcccccccCHHHHHH-------
Q 045798 745 KVITSCSSID-FQGNDFKAIVYEYMPNGSLEKW--------------LHPHAV--PKRDKEIEIKLTLLQRIS------- 800 (1008)
Q Consensus 745 ~~~~~~~~~~-~~~~~~~~lv~e~~~~gsL~~~--------------l~~~~~--~~~~~~~~~~l~~~~~~~------- 800 (1008)
+++....... ....+..++||+|++|..+... ++.... ............|.....
T Consensus 81 ~~~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 160 (322)
T 2ppq_A 81 LPLPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERAD 160 (322)
T ss_dssp CBCCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGG
T ss_pred cccCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHH
Confidence 3332210000 0123457899999988665321 111000 000000000001111000
Q ss_pred -----HHHHHHHHHHHHhhC----CCCCceeccCCCCCeeecCCCCeEEcccCccc
Q 045798 801 -----IAIDVASALDYLHHH----CQEPILHCDLKPSNILLDNDLSGHIGDFGLAR 847 (1008)
Q Consensus 801 -----i~~qi~~~L~~LH~~----~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~ 847 (1008)
+...+...++++++. .+.+++|+|+.+.||+++++..+.++||+.+.
T Consensus 161 ~~~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 161 EVEKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp GTSTTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhhhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 011234445555532 23479999999999999987656899999875
No 431
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.18 E-value=0.0012 Score=74.69 Aligned_cols=79 Identities=8% Similarity=0.028 Sum_probs=49.5
Q ss_pred CCceeccCCCCCeeecCCCCeEEcccCcccccccccCccccccccccccccccCccccCCC---CCCcccchhhHHHHHH
Q 045798 818 EPILHCDLKPSNILLDNDLSGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGS---EVSTNGDVYSYGILLL 894 (1008)
Q Consensus 818 ~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~sDvwslG~vl~ 894 (1008)
..++|||++|.||+++.++ ++++||+.+..-....+..... ..-...|.+|+..... ......++.+.+..+|
T Consensus 232 ~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (420)
T 2pyw_A 232 QALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAYL---GNLILAFFAQDGHATQENDRKEYKQWILRTIEQTW 307 (420)
T ss_dssp CEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHHH---HHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHH
T ss_pred CeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHHH---HHHHHHHHhcccccccccchHHHHHHHHHHHHHHH
Confidence 5899999999999998876 9999999997543222111100 0012346666654311 1122355668888888
Q ss_pred HHHhCC
Q 045798 895 EMVTAK 900 (1008)
Q Consensus 895 elltG~ 900 (1008)
+.+++.
T Consensus 308 ~~y~~~ 313 (420)
T 2pyw_A 308 NLFNKR 313 (420)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887754
No 432
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.10 E-value=0.0019 Score=70.27 Aligned_cols=99 Identities=8% Similarity=0.054 Sum_probs=60.6
Q ss_pred CCCCCHHHHHHHhcCCCC-----CceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhhcCCC--Cc
Q 045798 671 LPKMSYKSLLKATNGFSS-----THLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKNIRHR--NL 743 (1008)
Q Consensus 671 ~~~~~~~~~~~~~~~y~~-----~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~--ni 743 (1008)
....+.+.+......|.+ ++.++ |....||++... +|+.+++|+..... .....+..|..+++.+... .+
T Consensus 8 ~~~l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~-~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~v 84 (328)
T 1zyl_A 8 FQTLHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDE-DRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPV 84 (328)
T ss_dssp CCCCCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCT-TCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSB
T ss_pred CCCCCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcC-CCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCee
Confidence 455666666666555533 34576 888899987763 56789999986331 2345677788888877322 23
Q ss_pred eeeeeccccc-cccCCceEEEEEeccCCCCh
Q 045798 744 VKVITSCSSI-DFQGNDFKAIVYEYMPNGSL 773 (1008)
Q Consensus 744 v~~~~~~~~~-~~~~~~~~~lv~e~~~~gsL 773 (1008)
++++.. ... -...++..++|||+++|..+
T Consensus 85 p~~~~~-~g~~~~~~~g~~~~l~~~i~G~~~ 114 (328)
T 1zyl_A 85 AAPVAF-NGQTLLNHQGFYFAVFPSVGGRQF 114 (328)
T ss_dssp CCCCCB-TTBSCEEETTEEEEEEECCCCEEC
T ss_pred cceeec-CCcEEEEECCEEEEEEEecCCCCC
Confidence 444432 100 01124567899999987554
No 433
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.96 E-value=0.0017 Score=69.69 Aligned_cols=73 Identities=11% Similarity=0.067 Sum_probs=45.5
Q ss_pred CCCceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhhcCCCCc-eeeeeccccccccCCceEEEEE
Q 045798 687 SSTHLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKNIRHRNL-VKVITSCSSIDFQGNDFKAIVY 765 (1008)
Q Consensus 687 ~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~~~~~~~~~~~~~~~~~~lv~ 765 (1008)
.-++.|+.|....+|++ ..+++|+....... .....+|+.+++.+....+ .++++.+ ++..++|+
T Consensus 21 ~~i~~l~gG~tN~~~~~------~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~~-------~~~~~~v~ 86 (301)
T 3dxq_A 21 TGPLERLGGLTNLVFRA------GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHVD-------PATGVMVT 86 (301)
T ss_dssp CSCEEEESCSSEEEEEE------TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEEC-------TTTCCEEE
T ss_pred cceeEcCCcccccccee------eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEEE-------CCCCEEEE
Confidence 33788999999999998 45889987643221 1234568887777732222 4555542 22246899
Q ss_pred ecc-CCCCh
Q 045798 766 EYM-PNGSL 773 (1008)
Q Consensus 766 e~~-~~gsL 773 (1008)
||+ ++.++
T Consensus 87 e~i~~g~~l 95 (301)
T 3dxq_A 87 RYIAGAQTM 95 (301)
T ss_dssp ECCTTCEEC
T ss_pred eecCCCccC
Confidence 999 66555
No 434
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.88 E-value=0.0022 Score=70.62 Aligned_cols=144 Identities=15% Similarity=0.157 Sum_probs=83.7
Q ss_pred CceEeeccCeeEEEEEEcC-------CCeEEEEEEeccccchhhHHHHHHHHHHhhcC-CCCceeeeeccccccccCCce
Q 045798 689 THLIGVGSFGCVYKGALDE-------DGIVVAIKVINLQCEGASKSFMAECKALKNIR-HRNLVKVITSCSSIDFQGNDF 760 (1008)
Q Consensus 689 ~~~lg~G~~g~Vy~~~~~~-------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~ 760 (1008)
++.+..|-...+|++.... +++.|++|+.... ........+|.++++.+. +.-..++++.+. +
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~-----~--- 125 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFP-----E--- 125 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEET-----T---
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcC-----C---
Confidence 4668778889999988742 3578999986432 223456678999998883 333356666532 2
Q ss_pred EEEEEeccCCCChhcc-c----------------ccCCCCCCCccccccc--CHHHHHHHHHHHHH--------------
Q 045798 761 KAIVYEYMPNGSLEKW-L----------------HPHAVPKRDKEIEIKL--TLLQRISIAIDVAS-------------- 807 (1008)
Q Consensus 761 ~~lv~e~~~~gsL~~~-l----------------~~~~~~~~~~~~~~~l--~~~~~~~i~~qi~~-------------- 807 (1008)
.+||||++|.++..- + +....+ ..... -+.++.++..++..
T Consensus 126 -g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~-----~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~ 199 (379)
T 3feg_A 126 -GRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMP-----FTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEM 199 (379)
T ss_dssp -EEEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCS-----SCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHH
T ss_pred -ccEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCC-----CCCCcccHHHHHHHHHHHHHhccCcccchhhhhhh
Confidence 289999988665421 0 111000 00011 24455555544422
Q ss_pred -----HHHHHh----hC-CCCCceeccCCCCCeeecCC----CCeEEcccCccc
Q 045798 808 -----ALDYLH----HH-CQEPILHCDLKPSNILLDND----LSGHIGDFGLAR 847 (1008)
Q Consensus 808 -----~L~~LH----~~-~~~~ivH~Dlkp~NIll~~~----~~~kL~Dfg~a~ 847 (1008)
.++.|. .. .+..++|+|+.+.||+++.+ +.+.++||..|.
T Consensus 200 ~~l~~~~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 200 YSLKDEMGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp TTHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 223332 21 13468999999999999876 789999999886
No 435
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.82 E-value=0.0045 Score=70.10 Aligned_cols=76 Identities=16% Similarity=0.081 Sum_probs=48.9
Q ss_pred CceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhhcCCCCc-eeeeeccccccccCCceEEEEEec
Q 045798 689 THLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKNIRHRNL-VKVITSCSSIDFQGNDFKAIVYEY 767 (1008)
Q Consensus 689 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~~~~~~~~~~~~~~~~~~lv~e~ 767 (1008)
++.|+.|-...+|++.....+..|++|+........ -+..+|..+++.+...++ .++++++ . + ..||||
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~-idR~~E~~vl~~L~~~gl~P~ll~~~-----~-~---G~v~e~ 182 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEI-INREREKKISCILYNKNIAKKIYVFF-----T-N---GRIEEF 182 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSC-SCHHHHHHHHHHHTTSSSBCCEEEEE-----T-T---EEEEEC
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhh-cCHHHHHHHHHHHHhcCCCCCEEEEe-----C-C---eEEEEe
Confidence 467888999999999885335889999875432211 123689999998854444 4566653 1 1 359999
Q ss_pred cCCCChh
Q 045798 768 MPNGSLE 774 (1008)
Q Consensus 768 ~~~gsL~ 774 (1008)
++|.++.
T Consensus 183 I~G~~l~ 189 (458)
T 2qg7_A 183 MDGYALS 189 (458)
T ss_dssp CCSEECC
T ss_pred eCCccCC
Confidence 9875553
No 436
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.78 E-value=0.0028 Score=71.43 Aligned_cols=74 Identities=20% Similarity=0.222 Sum_probs=49.8
Q ss_pred CceEeeccCeeEEEEEEcC-------CCeEEEEEEeccccchhhHHHHHHHHHHhhcCCCC-ceeeeeccccccccCCce
Q 045798 689 THLIGVGSFGCVYKGALDE-------DGIVVAIKVINLQCEGASKSFMAECKALKNIRHRN-LVKVITSCSSIDFQGNDF 760 (1008)
Q Consensus 689 ~~~lg~G~~g~Vy~~~~~~-------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~~~~~~~~~~~~~~~~ 760 (1008)
++.|+.|....||++.... +++.|++|+.... ...+.+.+|..+++.+...+ ..++++.+ .+
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~-----~~--- 147 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIF-----SG--- 147 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEE-----TT---
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEe-----CC---
Confidence 4678889899999998742 2578999998432 11245668999998884333 35666652 21
Q ss_pred EEEEEeccCCCCh
Q 045798 761 KAIVYEYMPNGSL 773 (1008)
Q Consensus 761 ~~lv~e~~~~gsL 773 (1008)
.+|+||++|.++
T Consensus 148 -g~v~e~l~G~~l 159 (429)
T 1nw1_A 148 -GRLEEYIPSRPL 159 (429)
T ss_dssp -EEEECCCCEEEC
T ss_pred -CEEEEEeCCccc
Confidence 389999986554
No 437
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.77 E-value=0.0027 Score=69.12 Aligned_cols=32 Identities=22% Similarity=0.267 Sum_probs=27.7
Q ss_pred CCCceeccCCCCCeeecCC----CCeEEcccCcccc
Q 045798 817 QEPILHCDLKPSNILLDND----LSGHIGDFGLARF 848 (1008)
Q Consensus 817 ~~~ivH~Dlkp~NIll~~~----~~~kL~Dfg~a~~ 848 (1008)
+..++|||+.+.||+++.+ +.+.++||+.+..
T Consensus 182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 3579999999999999874 6789999998864
No 438
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.58 E-value=0.00023 Score=69.74 Aligned_cols=41 Identities=17% Similarity=0.225 Sum_probs=20.0
Q ss_pred cCCccCCeeeecCC-CCCC----CCCccccCCCCCCEEEccCCCCC
Q 045798 75 GNLSFLREINLSNN-TIQG----EIPPEFGRLFRLEALFLSNNSLV 115 (1008)
Q Consensus 75 ~~l~~L~~L~L~~n-~~~~----~~p~~~~~l~~L~~L~Ls~n~l~ 115 (1008)
..-+.|++|+|++| .|.. .+-+.+..-..|++|+|++|+|.
T Consensus 38 ~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~ig 83 (197)
T 1pgv_A 38 EDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAIS 83 (197)
T ss_dssp TTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCB
T ss_pred hcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCC
Confidence 34455666666553 4432 12233444455555555555555
No 439
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.55 E-value=0.00034 Score=68.55 Aligned_cols=40 Identities=20% Similarity=0.234 Sum_probs=18.7
Q ss_pred CCCCCcEEEecCC-cccc----cCCccccCCCCcceecccccccc
Q 045798 196 QLKQLKILAIGGN-NLSG----PIPPSIYNLSFLVVFSVSHNQIH 235 (1008)
Q Consensus 196 ~l~~L~~L~L~~n-~l~~----~~~~~~~~l~~L~~L~ls~N~l~ 235 (1008)
.-+.|+.|+|++| +|.. .+.+++..-+.|+.|+|++|+|.
T Consensus 39 ~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~ig 83 (197)
T 1pgv_A 39 DDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAIS 83 (197)
T ss_dssp TCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCB
T ss_pred cCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCC
Confidence 3445666666653 5432 12233344444555555555443
No 440
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.40 E-value=0.0028 Score=57.98 Aligned_cols=56 Identities=21% Similarity=0.373 Sum_probs=36.2
Q ss_pred cccccccccc-CCCCcccccccccceeeccCcccccchhhhhhccccccEEecCCCccc
Q 045798 499 SFDVSNNDLS-GEIPIELGHCSSLEEIYLAGNLFHGSIPSFFNALKGVQKIDLSRNNLS 556 (1008)
Q Consensus 499 ~Ldls~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~ 556 (1008)
.+|-+++.++ ..+|..+. .+|++|+|++|+|+...+..|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 4566666664 24554432 45777777777777555566777777777777777665
No 441
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.33 E-value=0.011 Score=64.40 Aligned_cols=31 Identities=26% Similarity=0.318 Sum_probs=27.7
Q ss_pred CCceeccCCCCCeeecCCCCeEEcccCcccc
Q 045798 818 EPILHCDLKPSNILLDNDLSGHIGDFGLARF 848 (1008)
Q Consensus 818 ~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~ 848 (1008)
..++|+|+.+.||++++++.+.++||+.+..
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 4799999999999999888899999988764
No 442
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.33 E-value=0.0075 Score=66.65 Aligned_cols=75 Identities=12% Similarity=0.166 Sum_probs=44.7
Q ss_pred CceEeeccCeeEEEEEEcC--------CCeEEEEEEeccccchhhHHHHHHHHHHhhcCCCC-ceeeeeccccccccCCc
Q 045798 689 THLIGVGSFGCVYKGALDE--------DGIVVAIKVINLQCEGASKSFMAECKALKNIRHRN-LVKVITSCSSIDFQGND 759 (1008)
Q Consensus 689 ~~~lg~G~~g~Vy~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~~~~~~~~~~~~~~~ 759 (1008)
.+.++.|....+|++.... .++.+++|+...... .......|.++++.+...+ +.++++.. .
T Consensus 38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~-~~~~~~~E~~~l~~L~~~g~~P~~~~~~-----~--- 108 (369)
T 3c5i_A 38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD-ELYNTISEFEVYKTMSKYKIAPQLLNTF-----N--- 108 (369)
T ss_dssp EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG-GTSCHHHHHHHHHHHHHTTSSCCEEEEE-----T---
T ss_pred EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc-ceecHHHHHHHHHHHHhcCCCCceEEec-----C---
Confidence 3567888889999998742 126889998754322 1123467888888774323 44565541 1
Q ss_pred eEEEEEeccCCCCh
Q 045798 760 FKAIVYEYMPNGSL 773 (1008)
Q Consensus 760 ~~~lv~e~~~~gsL 773 (1008)
.++||||++|..+
T Consensus 109 -~~~v~e~i~G~~l 121 (369)
T 3c5i_A 109 -GGRIEEWLYGDPL 121 (369)
T ss_dssp -TEEEEECCCSEEC
T ss_pred -CcEEEEEecCCcC
Confidence 2689999987554
No 443
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.13 E-value=0.0059 Score=55.82 Aligned_cols=56 Identities=23% Similarity=0.327 Sum_probs=34.2
Q ss_pred eeecccccCC-CCCCCCCccccccchhhcccccCCCCCCccccCCCCCcEEEecCCccc
Q 045798 154 DLSLAKNKLT-GGIPPFLGNLTSLEVLSLAGNSFGRNIPDSLGQLKQLKILAIGGNNLS 211 (1008)
Q Consensus 154 ~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 211 (1008)
.++.+++.++ ..+|..+. ++|++|+|++|+|+...++.|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 4566666664 24454433 35666677777666666666666777777777776654
No 444
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=95.94 E-value=0.023 Score=55.84 Aligned_cols=103 Identities=16% Similarity=0.078 Sum_probs=65.8
Q ss_pred CChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCCCceeccCCCCCeeecCCCCeEEcccCcccccc
Q 045798 771 GSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQEPILHCDLKPSNILLDNDLSGHIGDFGLARFHQ 850 (1008)
Q Consensus 771 gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~ 850 (1008)
.+|.+.+...+ .+++++++|.++.|.+.+|.-+-.. +.-..+=+.|..|++..+|.+...+ +.+.
T Consensus 33 vSL~eIL~~~~---------~PlsEEqaWALc~Qc~~~L~~~~~~--~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~--- 97 (229)
T 2yle_A 33 LSLEEILRLYN---------QPINEEQAWAVCYQCCGSLRAAARR--RQPRHRVRSAAQIRVWRDGAVTLAP-AADD--- 97 (229)
T ss_dssp EEHHHHHHHHT---------SCCCHHHHHHHHHHHHHHHHHHHHT--TCCCCCCCSGGGEEEETTSCEEECC-C------
T ss_pred ccHHHHHHHcC---------CCcCHHHHHHHHHHHHHHHHhhhhc--ccCCceecCCcceEEecCCceeccc-cccc---
Confidence 36777776543 2899999999999999998776221 0111233456889999999988764 1111
Q ss_pred cccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHhCCCC
Q 045798 851 EVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVTAKKP 902 (1008)
Q Consensus 851 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltG~~p 902 (1008)
.....+.|||... ...+.+.=|||+|+++|..+--..|
T Consensus 98 -------------~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 98 -------------AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp ----------------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred -------------ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 0223466888753 3456788999999999999875554
No 445
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.83 E-value=0.024 Score=62.61 Aligned_cols=145 Identities=14% Similarity=0.144 Sum_probs=82.9
Q ss_pred CceEeeccCeeEEEEEEcC-------CCeEEEEEEeccccch------------------hhHHHHHHHHHHhhcC-CCC
Q 045798 689 THLIGVGSFGCVYKGALDE-------DGIVVAIKVINLQCEG------------------ASKSFMAECKALKNIR-HRN 742 (1008)
Q Consensus 689 ~~~lg~G~~g~Vy~~~~~~-------~~~~vavK~~~~~~~~------------------~~~~~~~E~~~l~~l~-h~n 742 (1008)
++.|..|-...+|++.... .++.|++++.-...+. ..+....|..+++.+. +.-
T Consensus 57 v~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi 136 (401)
T 3f2s_A 57 ISVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSL 136 (401)
T ss_dssp EEEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTS
T ss_pred EEEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCC
Confidence 4667778889999988742 1368899987543221 0112345888888883 444
Q ss_pred ceeeeeccccccccCCceEEEEEeccCCCChhc--cc---------------ccCCCCCCCccccccc--CHHHHHHHHH
Q 045798 743 LVKVITSCSSIDFQGNDFKAIVYEYMPNGSLEK--WL---------------HPHAVPKRDKEIEIKL--TLLQRISIAI 803 (1008)
Q Consensus 743 iv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~--~l---------------~~~~~~~~~~~~~~~l--~~~~~~~i~~ 803 (1008)
..++++++ .. .+|+||++|-+|.. +. +....+ ..... .+..+.++..
T Consensus 137 ~Pkl~~~~-----~~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~-----~~~~~~~l~~~i~~~~~ 202 (401)
T 3f2s_A 137 GPKLYGIF-----PQ----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMP-----FNKEPKWLFGTMEKYLK 202 (401)
T ss_dssp SCCEEEEE-----TT----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCS-----SCCSCCHHHHHHHHHHH
T ss_pred CCeEEEEe-----CC----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCC-----CCCCcchHHHHHHHHHH
Confidence 55666662 22 28999998755532 10 111000 00011 1223333433
Q ss_pred HHH----------------------HHH----HHHhhC-CCCCceeccCCCCCeeecCC------CCeEEcccCccc
Q 045798 804 DVA----------------------SAL----DYLHHH-CQEPILHCDLKPSNILLDND------LSGHIGDFGLAR 847 (1008)
Q Consensus 804 qi~----------------------~~L----~~LH~~-~~~~ivH~Dlkp~NIll~~~------~~~kL~Dfg~a~ 847 (1008)
++. .-+ ++|... .+..++|+|+.+.||+++++ +.+.++||..|.
T Consensus 203 ~l~~~~~~~~~~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 203 EVLRIKFTEESRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHCCCCSHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred HHHhccCcchhhhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 321 112 223322 23468899999999999876 789999998875
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.58 E-value=0.059 Score=60.04 Aligned_cols=75 Identities=8% Similarity=0.084 Sum_probs=48.8
Q ss_pred CceEeeccCeeEEEEEEcCC-------CeEEEEEEeccccchhhHHHHHHHHHHhhcC-CCCceeeeeccccccccCCce
Q 045798 689 THLIGVGSFGCVYKGALDED-------GIVVAIKVINLQCEGASKSFMAECKALKNIR-HRNLVKVITSCSSIDFQGNDF 760 (1008)
Q Consensus 689 ~~~lg~G~~g~Vy~~~~~~~-------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~ 760 (1008)
++.+..|-...+|+...... ++.|++|+.....+ ..-+..+|.++++.+. +.-..++++.+ .
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~-~~idR~~E~~~l~~L~~~gi~P~l~~~~-----~---- 144 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVG-KFYDSKVELDVFRYLSNINIAPNIIADF-----P---- 144 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEE-----T----
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcc-hhcCHHHHHHHHHHHHhcCCCCCEEEEc-----C----
Confidence 46677788899999987421 57899998754322 1223467888888873 32244555432 1
Q ss_pred EEEEEeccCCCCh
Q 045798 761 KAIVYEYMPNGSL 773 (1008)
Q Consensus 761 ~~lv~e~~~~gsL 773 (1008)
.+.||||++|..|
T Consensus 145 ~~~I~efI~G~~l 157 (424)
T 3mes_A 145 EGRIEEFIDGEPL 157 (424)
T ss_dssp TEEEEECCCSEEC
T ss_pred CCEEEEEeCCccC
Confidence 2689999988664
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=90.21 E-value=0.12 Score=57.39 Aligned_cols=28 Identities=29% Similarity=0.345 Sum_probs=24.3
Q ss_pred ceeccCCCCCeee------cCCCCeEEcccCccc
Q 045798 820 ILHCDLKPSNILL------DNDLSGHIGDFGLAR 847 (1008)
Q Consensus 820 ivH~Dlkp~NIll------~~~~~~kL~Dfg~a~ 847 (1008)
++|+|+.+.||++ +++..++++||.+|.
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~ 279 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhcc
Confidence 5799999999999 456779999999886
No 448
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=75.34 E-value=3.6 Score=40.35 Aligned_cols=118 Identities=14% Similarity=0.113 Sum_probs=77.3
Q ss_pred CCCCceeeeeccccccccCCceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHHHHHHHHHhhCCCC
Q 045798 739 RHRNLVKVITSCSSIDFQGNDFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDVASALDYLHHHCQE 818 (1008)
Q Consensus 739 ~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~ 818 (1008)
.||+.+..- + ...++.+.+.++.- .+...|-.- ...+...+++++.+|+....+++.
T Consensus 43 ~~~~Fl~~~-I-----~e~eD~v~~~y~~~--~~~~~f~~i-----------k~~~~~eKlr~l~ni~~l~~~~~~---- 99 (215)
T 4ann_A 43 HSPYFIDAE-L-----TELRDSFQIHYDIN--DNHTPFDNI-----------KSFTKNEKLRYLLNIKNLEEVNRT---- 99 (215)
T ss_dssp CCTTBCCEE-E-----EECSSEEEEEECCC--TTSEEGGGG-----------GGSCHHHHHHHHHHGGGGGGGGGS----
T ss_pred cCCcccceE-E-----EEcccEEEEEEEcC--cccCCHHHH-----------HhcCHHHHHHHHHHHHHHHHHhcC----
Confidence 688877542 2 23445555555543 233333221 167889999999999998877664
Q ss_pred CceeccCCCCCeeecCCCCeEEcccCcccccccccCccccccccccccccccCccccCCCCCCcccchhhHHHHHHHHHh
Q 045798 819 PILHCDLKPSNILLDNDLSGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYTAPEYGLGSEVSTNGDVYSYGILLLEMVT 898 (1008)
Q Consensus 819 ~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt 898 (1008)
-+|--+.|+||+++.++.+++.-.|+-..+ +|.- .++..=.-.+=|++..+++
T Consensus 100 -r~tf~L~P~NL~f~~~~~p~i~~RGik~~l---------------------~P~~-----~~ee~fL~qyKAliiall~ 152 (215)
T 4ann_A 100 -RYTFVLAPDELFFTRDGLPIAKTRGLQNVV---------------------DPLP-----VSEAEFLTRYKALVICAFN 152 (215)
T ss_dssp -SEECCCSGGGEEECTTSCEEESCCEETTTB---------------------SCCC-----CCHHHHHHHHHHHHHHHHC
T ss_pred -ceEEEEecceEEEcCCCCEEEEEccCccCC---------------------CCCC-----CCHHHHHHHHHHHHHHHHc
Confidence 378889999999999999999877764322 2211 1112223356678889999
Q ss_pred CCCCCCcc
Q 045798 899 AKKPTDVM 906 (1008)
Q Consensus 899 G~~pf~~~ 906 (1008)
++..|+.-
T Consensus 153 ~K~~Fe~l 160 (215)
T 4ann_A 153 EKQSFDAL 160 (215)
T ss_dssp TTCCHHHH
T ss_pred CCCCHHHH
Confidence 99988654
No 449
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=73.96 E-value=3.4 Score=28.80 Aligned_cols=24 Identities=17% Similarity=0.224 Sum_probs=10.3
Q ss_pred eeehhHHHHHHHHHHHHH-Hhhhhh
Q 045798 630 IIISAITAFSGFFMVSFF-ILYWHK 653 (1008)
Q Consensus 630 iii~~~~~~~~~~~~~~~-~~~~~~ 653 (1008)
|+..++.++++++++++. +++|++
T Consensus 13 IA~gVVgGv~~~~ii~~~~~~~~RR 37 (44)
T 2ks1_B 13 IATGMVGALLLLLVVALGIGLFMRR 37 (44)
T ss_dssp STHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEeehhHHHHHHHHHHHHHHHHhhh
Confidence 334444445554444433 333433
No 450
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=73.58 E-value=0.35 Score=54.65 Aligned_cols=60 Identities=10% Similarity=0.052 Sum_probs=17.2
Q ss_pred CCCceEeeccCeeEEEEEEcCCCeEEEE------EEecccc--chhhHHHHHHHHHHhhcCCCCceeeeec
Q 045798 687 SSTHLIGVGSFGCVYKGALDEDGIVVAI------KVINLQC--EGASKSFMAECKALKNIRHRNLVKVITS 749 (1008)
Q Consensus 687 ~~~~~lg~G~~g~Vy~~~~~~~~~~vav------K~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~ 749 (1008)
.+.+.+| ||.||+|.+.....+||+ |..+... .+....+.+|..+++...|||+++.+++
T Consensus 145 ~l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f 212 (463)
T 3cxl_A 145 PIYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNF 212 (463)
T ss_dssp CSTTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCE
T ss_pred cccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcce
Confidence 4456676 999999999755568888 7665321 2334568889999999999999998776
No 451
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=72.95 E-value=3.3 Score=28.79 Aligned_cols=23 Identities=22% Similarity=0.163 Sum_probs=9.5
Q ss_pred eehhHHHHHHHHHHHHHHhhhhh
Q 045798 631 IISAITAFSGFFMVSFFILYWHK 653 (1008)
Q Consensus 631 ii~~~~~~~~~~~~~~~~~~~~~ 653 (1008)
|++.+++++.++++.+.+++|.+
T Consensus 14 Ia~~vVGvll~vi~~l~~~~~~R 36 (44)
T 2jwa_A 14 IISAVVGILLVVVLGVVFGILIK 36 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhhee
Confidence 34444444444444443333333
No 452
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=71.84 E-value=5.6 Score=39.16 Aligned_cols=82 Identities=21% Similarity=0.220 Sum_probs=58.8
Q ss_pred ccCHHHHHHHHHHHHHHHH-HHhhCCCCCceeccCCCCCeeecCCCCeEEcccCcccccccccCcccccccccccccccc
Q 045798 792 KLTLLQRISIAIDVASALD-YLHHHCQEPILHCDLKPSNILLDNDLSGHIGDFGLARFHQEVSNSTLSSSVGVKGTIGYT 870 (1008)
Q Consensus 792 ~l~~~~~~~i~~qi~~~L~-~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~ 870 (1008)
.++...+++++.+|+.... +++. -+|--+.|+||+++.++.+++.-.|+-.. +
T Consensus 81 ~~~~~eKlrll~nl~~L~~~~~~~-----r~tf~l~P~NL~f~~~~~p~i~hRGi~~~---------------------l 134 (219)
T 4ano_A 81 KTTLLSRIRAAIHLVSKVKHHSAR-----RLIFIVCPENLMFNRALEPFFLHVGVKES---------------------L 134 (219)
T ss_dssp TSCHHHHHHHHHHHHHHHSSCCSS-----SEECCCCGGGEEECTTCCEEESCCEETTT---------------------B
T ss_pred hcCHHHHHHHHHHHHHHHHHhhhC-----ceeEEEeCceEEEeCCCcEEEEEcCCccc---------------------C
Confidence 6788899999999988877 6654 47788999999999999999987775432 2
Q ss_pred CccccCCCCCCcccchhhHHHHHHHHHhCCCCCC
Q 045798 871 APEYGLGSEVSTNGDVYSYGILLLEMVTAKKPTD 904 (1008)
Q Consensus 871 aPE~~~~~~~~~~sDvwslG~vl~elltG~~pf~ 904 (1008)
+|.-+ ++.-=.-++=|++..++.++..|+
T Consensus 135 pP~e~-----~ee~fl~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 135 PPDEW-----DDERLLREVKATVLALTEGEYRFD 163 (219)
T ss_dssp SSCSC-----CHHHHHHHHHHHHHHHTTCSSCHH
T ss_pred CCCCC-----CHHHHHHHHHHHHHHHHcCCCCHH
Confidence 33221 111113356678888888888765
No 453
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=62.17 E-value=5.9 Score=27.58 Aligned_cols=23 Identities=13% Similarity=0.176 Sum_probs=9.4
Q ss_pred ehhHHHHHHHHHHHHH-Hhhhhhc
Q 045798 632 ISAITAFSGFFMVSFF-ILYWHKW 654 (1008)
Q Consensus 632 i~~~~~~~~~~~~~~~-~~~~~~~ 654 (1008)
..++.++++++++.+. +++|+++
T Consensus 14 ~gVVgGv~~v~ii~~~~~~~~RRR 37 (44)
T 2l2t_A 14 AGVIGGLFILVIVGLTFAVYVRRK 37 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EeehHHHHHHHHHHHHHHHHhhhh
Confidence 3344444444444333 3444433
No 454
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=37.71 E-value=13 Score=25.42 Aligned_cols=8 Identities=0% Similarity=-0.209 Sum_probs=3.0
Q ss_pred hhHHHHHH
Q 045798 633 SAITAFSG 640 (1008)
Q Consensus 633 ~~~~~~~~ 640 (1008)
+++.++..
T Consensus 18 ~vv~Gv~l 25 (41)
T 2k9y_A 18 GVAVGVVL 25 (41)
T ss_dssp HHHHHHHH
T ss_pred ehhHHHHH
Confidence 33333333
No 455
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=37.27 E-value=81 Score=26.45 Aligned_cols=45 Identities=16% Similarity=0.104 Sum_probs=21.9
Q ss_pred CCCCCCccccCCCCCCEEEccCCCCCCccCcccccCcCcceEeeec
Q 045798 90 IQGEIPPEFGRLFRLEALFLSNNSLVGKIPANLSYCSRLTVLCIEY 135 (1008)
Q Consensus 90 ~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~ 135 (1008)
++.+-..+|.++.+|+.+.|-.+ ++.+...+|.++.+|+.+.+..
T Consensus 8 vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 8 VVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred cCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 34334445555555555555443 2223344555555555555543
No 456
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=36.48 E-value=60 Score=27.24 Aligned_cols=45 Identities=16% Similarity=0.208 Sum_probs=23.4
Q ss_pred CCCCCCCCCccccccchhhcccccCCCCCCccccCCCCCcEEEecC
Q 045798 162 LTGGIPPFLGNLTSLEVLSLAGNSFGRNIPDSLGQLKQLKILAIGG 207 (1008)
Q Consensus 162 l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 207 (1008)
++.+....|.++.+|+.+.+-.+ ++..-..+|.++.+|+.+.+..
T Consensus 8 vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 8 VVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred cCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 33344445555555555555543 3344445566666666655554
No 457
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=34.94 E-value=4.1e+02 Score=30.37 Aligned_cols=47 Identities=19% Similarity=0.109 Sum_probs=34.8
Q ss_pred CHHHHHHHHHHHH--HHHHHHhhCCCCCceeccCCCCCeeecCCCCeEEcccCccc
Q 045798 794 TLLQRISIAIDVA--SALDYLHHHCQEPILHCDLKPSNILLDNDLSGHIGDFGLAR 847 (1008)
Q Consensus 794 ~~~~~~~i~~qi~--~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~ 847 (1008)
.+..+..++..+| ..+.|+=.. +|=.++|||++.+|++.=+|||.+-
T Consensus 453 ~~~a~~nF~~S~A~ySvv~YILGi-------gDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 453 SAEVMDTYVKSCAGYCVITYILGV-------GDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTC-------CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred cHHHHHHHHHHHHHHhHhheeeec-------cCCCCcceeEcCCCCEeeeehHHhh
Confidence 3555666666655 345565532 5778999999999999999999984
No 458
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=30.38 E-value=2.7e+02 Score=29.17 Aligned_cols=140 Identities=17% Similarity=0.074 Sum_probs=72.0
Q ss_pred ceEeeccCeeEEEEEEcCCCeEEEEEEeccccchhhHHHHHHHHHHhhcCCCCceeeeecccc-------------c---
Q 045798 690 HLIGVGSFGCVYKGALDEDGIVVAIKVINLQCEGASKSFMAECKALKNIRHRNLVKVITSCSS-------------I--- 753 (1008)
Q Consensus 690 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-------------~--- 753 (1008)
+..-.| .+.||.+.. ++..|+||-.. ....+.+-.++...=.+.-|+..-+. +... .
T Consensus 75 ~~s~~G-stgvff~~t--d~~~~VVK~s~---~l~~E~l~s~LA~~LGlpiP~~Riv~-~~~~E~~e~~~~L~~~~~~~~ 147 (342)
T 1cja_A 75 ERSEKG-TEGLFFVET--ESGVFIVKRST---NIESETFCSLLCMRLGLHAPKVRVVS-SNSEEGTNMLECLAAIDKSFR 147 (342)
T ss_dssp EECCST-TSCEEEEEE--SSCEEEEECCT---THHHHHHHHHHHHHHTCCCCCEEEEE-SSSHHHHHHHHHHHHHCSSSC
T ss_pred EeccCC-CCCeEEEEe--CCCEEEEeCcH---HHHHHHHHHHHHHHhCCCCCCeeEEe-eCcHHHHHHHHHHHHhhhhhH
Confidence 444445 456666666 57789999542 23344455555444445566533222 1100 0
Q ss_pred --cccCCceEEEEEeccCCCChhcccccCCCCCCCcccccccCHHHHHHHHHHH--HHHHHHHhhCCCC-Cce-eccCCC
Q 045798 754 --DFQGNDFKAIVYEYMPNGSLEKWLHPHAVPKRDKEIEIKLTLLQRISIAIDV--ASALDYLHHHCQE-PIL-HCDLKP 827 (1008)
Q Consensus 754 --~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qi--~~~L~~LH~~~~~-~iv-H~Dlkp 827 (1008)
.........++|||.+|..|...-.... ...+..+ .+.++ +-++.++..+..+ +.+ +.-=.+
T Consensus 148 ~l~~l~~~~~~l~meyv~G~~L~e~~~~~~--------~~~f~~~----~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~ 215 (342)
T 1cja_A 148 VITTLANQANILLMELVRGITLNKLTTTSA--------PEVLTKS----TMQQLGSLMALDVIVNNSDRLPIAWTNEGNL 215 (342)
T ss_dssp HHHHHTTCSEEEEEECCCEEESTTCCSSSH--------HHHSCHH----HHHHHHHHHHHHHHHTCCSSSCSSSCSCCCG
T ss_pred HHHHhhcccceehhhhcCCCccccchhhhh--------hhhcCHH----HHHhhchhheehhhhcCCccCcccccCCCCh
Confidence 0011224669999998766655422110 0023322 23333 2345555544221 122 223578
Q ss_pred CCeeecCCCC-eEEcccCcccc
Q 045798 828 SNILLDNDLS-GHIGDFGLARF 848 (1008)
Q Consensus 828 ~NIll~~~~~-~kL~Dfg~a~~ 848 (1008)
.|||+++++. +.++|-+.+..
T Consensus 216 ~NIL~~~~n~~~~~IDhn~af~ 237 (342)
T 1cja_A 216 DNIMLSERGATVVPIDSKIIPL 237 (342)
T ss_dssp GGEEEESBTTCEEECSCCCCCC
T ss_pred hheEEeCCCCeEEEEcCCcccc
Confidence 9999977554 88999988864
Done!