Query 045799
Match_columns 231
No_of_seqs 141 out of 2106
Neff 10.3
Searched_HMMs 29240
Date Mon Mar 25 09:30:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045799.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045799hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2a14_A Indolethylamine N-methy 99.8 1.3E-20 4.3E-25 147.3 10.4 168 25-217 8-239 (263)
2 3lcc_A Putative methyl chlorid 99.8 9.8E-20 3.4E-24 139.8 11.5 161 32-226 32-217 (235)
3 3dli_A Methyltransferase; PSI- 99.8 7E-20 2.4E-24 141.1 9.3 142 53-217 27-185 (240)
4 3sm3_A SAM-dependent methyltra 99.8 4E-19 1.4E-23 136.1 11.6 149 71-227 29-218 (235)
5 3h2b_A SAM-dependent methyltra 99.8 6.2E-19 2.1E-23 132.3 12.3 125 73-218 42-184 (203)
6 3e23_A Uncharacterized protein 99.8 3.4E-19 1.2E-23 134.6 10.6 157 32-221 13-187 (211)
7 3ou2_A SAM-dependent methyltra 99.8 4.8E-19 1.7E-23 134.1 10.7 144 71-221 45-210 (218)
8 4gek_A TRNA (CMO5U34)-methyltr 99.8 2.7E-19 9.2E-24 139.3 8.6 142 71-214 69-243 (261)
9 3l8d_A Methyltransferase; stru 99.8 1.3E-18 4.6E-23 133.9 12.2 130 71-217 52-201 (242)
10 3pfg_A N-methyltransferase; N, 99.8 1.1E-18 3.6E-23 136.2 9.5 172 27-213 13-234 (263)
11 1xtp_A LMAJ004091AAA; SGPP, st 99.8 3.7E-19 1.3E-23 138.0 5.8 126 71-216 92-238 (254)
12 2p7i_A Hypothetical protein; p 99.8 2.1E-18 7.3E-23 133.1 8.9 139 71-218 41-201 (250)
13 3g5l_A Putative S-adenosylmeth 99.8 8E-18 2.7E-22 130.5 12.1 140 71-217 43-217 (253)
14 4htf_A S-adenosylmethionine-de 99.8 1.3E-18 4.5E-23 137.3 7.5 139 71-217 67-233 (285)
15 2ex4_A Adrenal gland protein A 99.7 6.3E-18 2.2E-22 130.2 10.7 125 71-216 78-225 (241)
16 2g72_A Phenylethanolamine N-me 99.7 6.3E-18 2.1E-22 133.7 10.9 84 119-218 172-258 (289)
17 3hnr_A Probable methyltransfer 99.7 1.5E-19 5.1E-24 137.3 1.0 138 71-216 44-201 (220)
18 3e8s_A Putative SAM dependent 99.7 1.8E-17 6E-22 126.2 12.5 136 71-215 51-208 (227)
19 1vl5_A Unknown conserved prote 99.7 8.6E-18 3E-22 130.8 8.7 134 71-219 36-193 (260)
20 3dlc_A Putative S-adenosyl-L-m 99.7 1E-18 3.5E-23 132.3 3.1 171 27-215 8-202 (219)
21 3ujc_A Phosphoethanolamine N-m 99.7 2.1E-17 7.1E-22 128.9 10.3 134 70-217 53-207 (266)
22 2i62_A Nicotinamide N-methyltr 99.7 2.3E-17 8E-22 128.5 10.6 166 32-217 18-240 (265)
23 1xxl_A YCGJ protein; structura 99.7 1.4E-17 4.8E-22 128.1 9.2 134 71-219 20-177 (239)
24 3ege_A Putative methyltransfer 99.7 1.3E-17 4.4E-22 130.0 8.9 134 71-221 33-183 (261)
25 1vlm_A SAM-dependent methyltra 99.7 6.2E-17 2.1E-21 122.9 12.1 132 73-217 48-189 (219)
26 2o57_A Putative sarcosine dime 99.7 2.7E-17 9.3E-22 130.4 10.1 131 71-217 81-235 (297)
27 2aot_A HMT, histamine N-methyl 99.7 3.4E-17 1.1E-21 129.7 10.3 153 53-216 35-221 (292)
28 3bkw_A MLL3908 protein, S-aden 99.7 7.8E-17 2.7E-21 124.0 11.9 139 71-216 42-214 (243)
29 3mgg_A Methyltransferase; NYSG 99.7 2.2E-18 7.5E-23 135.3 3.2 141 71-221 36-203 (276)
30 3dtn_A Putative methyltransfer 99.7 1.4E-17 4.8E-22 127.6 7.5 142 71-217 43-215 (234)
31 3bxo_A N,N-dimethyltransferase 99.7 2.6E-17 8.7E-22 126.4 8.6 137 71-214 39-225 (239)
32 3dh0_A SAM dependent methyltra 99.7 3.5E-17 1.2E-21 124.1 9.0 124 71-217 36-182 (219)
33 3g2m_A PCZA361.24; SAM-depende 99.7 3.3E-17 1.1E-21 130.1 8.6 140 71-217 81-275 (299)
34 2gb4_A Thiopurine S-methyltran 99.7 1.1E-16 3.8E-21 123.9 11.3 157 32-218 32-229 (252)
35 3bus_A REBM, methyltransferase 99.7 1.5E-17 5.3E-22 130.2 6.1 135 71-218 60-218 (273)
36 3ccf_A Cyclopropane-fatty-acyl 99.7 4.8E-17 1.6E-21 128.0 8.9 139 71-220 56-214 (279)
37 3cc8_A Putative methyltransfer 99.7 7.5E-17 2.6E-21 122.9 9.5 136 71-219 31-188 (230)
38 2yqz_A Hypothetical protein TT 99.7 5.6E-17 1.9E-21 126.3 9.0 137 71-221 38-201 (263)
39 3thr_A Glycine N-methyltransfe 99.7 8.1E-17 2.8E-21 127.4 9.6 121 27-163 22-178 (293)
40 2kw5_A SLR1183 protein; struct 99.7 3E-17 1E-21 122.9 6.7 126 71-221 29-176 (202)
41 1ri5_A MRNA capping enzyme; me 99.7 2.6E-17 8.9E-22 130.4 6.3 142 71-217 63-251 (298)
42 1y8c_A S-adenosylmethionine-de 99.7 1.7E-16 5.7E-21 122.2 9.7 139 71-216 36-225 (246)
43 3ggd_A SAM-dependent methyltra 99.7 3.8E-17 1.3E-21 126.0 5.8 141 71-219 55-222 (245)
44 3i9f_A Putative type 11 methyl 99.7 1.5E-16 5.3E-21 115.8 8.6 119 71-217 16-149 (170)
45 2p8j_A S-adenosylmethionine-de 99.7 1.7E-16 5.9E-21 119.3 9.2 139 71-218 22-185 (209)
46 4e2x_A TCAB9; kijanose, tetron 99.7 1.3E-16 4.3E-21 132.5 9.2 128 71-217 106-254 (416)
47 3kkz_A Uncharacterized protein 99.7 3E-16 1E-20 122.6 10.7 128 71-217 45-197 (267)
48 1kpg_A CFA synthase;, cyclopro 99.7 2.5E-16 8.6E-21 124.3 10.2 137 70-217 62-229 (287)
49 2p35_A Trans-aconitate 2-methy 99.7 3.8E-16 1.3E-20 121.3 9.5 137 71-215 32-189 (259)
50 3f4k_A Putative methyltransfer 99.6 1.6E-15 5.5E-20 117.6 11.8 128 71-217 45-197 (257)
51 2zfu_A Nucleomethylin, cerebra 99.6 2E-15 6.8E-20 114.1 11.4 105 71-215 66-178 (215)
52 4hg2_A Methyltransferase type 99.6 3.7E-16 1.2E-20 121.2 7.3 85 71-164 38-139 (257)
53 2xvm_A Tellurite resistance pr 99.6 4.6E-16 1.6E-20 116.0 7.6 120 71-216 31-173 (199)
54 1nkv_A Hypothetical protein YJ 99.6 2.9E-16 9.9E-21 121.8 6.5 127 71-215 35-186 (256)
55 3hem_A Cyclopropane-fatty-acyl 99.6 9.3E-16 3.2E-20 121.9 9.4 138 70-218 70-245 (302)
56 2vdw_A Vaccinia virus capping 99.6 2.7E-15 9.3E-20 119.1 11.9 142 71-217 47-247 (302)
57 2gs9_A Hypothetical protein TT 99.6 2.5E-16 8.5E-21 118.7 5.6 118 71-207 35-171 (211)
58 1pjz_A Thiopurine S-methyltran 99.6 6.1E-17 2.1E-21 121.6 2.2 122 71-218 21-178 (203)
59 3vc1_A Geranyl diphosphate 2-C 99.6 6.3E-16 2.2E-20 123.5 8.3 133 70-218 115-271 (312)
60 2pxx_A Uncharacterized protein 99.6 4.8E-16 1.7E-20 117.2 7.1 123 32-167 6-166 (215)
61 4fsd_A Arsenic methyltransfera 99.6 3.8E-16 1.3E-20 128.1 7.0 139 71-219 82-254 (383)
62 3jwg_A HEN1, methyltransferase 99.6 1.5E-15 5.3E-20 115.0 8.3 131 71-214 28-190 (219)
63 3jwh_A HEN1; methyltransferase 99.6 7.5E-16 2.6E-20 116.6 6.4 130 71-213 28-189 (217)
64 2fk8_A Methoxy mycolic acid sy 99.6 1.7E-15 5.8E-20 121.3 8.3 137 70-217 88-255 (318)
65 3ocj_A Putative exported prote 99.6 2.7E-15 9.1E-20 119.5 9.3 139 71-215 117-290 (305)
66 3gu3_A Methyltransferase; alph 99.6 7.6E-16 2.6E-20 121.4 5.3 139 71-215 21-189 (284)
67 3bkx_A SAM-dependent methyltra 99.6 2.5E-15 8.6E-20 117.7 8.1 141 71-216 42-219 (275)
68 1wzn_A SAM-dependent methyltra 99.6 4.8E-15 1.6E-19 114.7 8.7 116 32-161 8-146 (252)
69 3cgg_A SAM-dependent methyltra 99.6 6.4E-15 2.2E-19 109.2 8.8 111 71-215 45-174 (195)
70 3d2l_A SAM-dependent methyltra 99.6 5.9E-15 2E-19 113.4 8.2 137 71-215 32-222 (243)
71 3i53_A O-methyltransferase; CO 99.6 2.5E-15 8.7E-20 121.0 5.9 132 71-217 168-322 (332)
72 3lst_A CALO1 methyltransferase 99.6 8.2E-15 2.8E-19 118.8 8.6 132 71-215 183-335 (348)
73 1ve3_A Hypothetical protein PH 99.5 1.5E-14 5E-19 110.1 9.0 87 71-163 37-145 (227)
74 3dp7_A SAM-dependent methyltra 99.5 4.6E-15 1.6E-19 120.9 6.0 141 71-215 178-341 (363)
75 3reo_A (ISO)eugenol O-methyltr 99.5 5.5E-15 1.9E-19 120.6 6.4 138 71-217 202-356 (368)
76 2avn_A Ubiquinone/menaquinone 99.5 3.1E-15 1.1E-19 116.4 4.5 137 71-217 53-214 (260)
77 3mcz_A O-methyltransferase; ad 99.5 2.8E-15 9.5E-20 121.7 4.3 136 73-215 180-338 (352)
78 3ofk_A Nodulation protein S; N 99.5 9.1E-15 3.1E-19 110.5 6.7 87 71-163 50-157 (216)
79 3p9c_A Caffeic acid O-methyltr 99.5 8.2E-15 2.8E-19 119.4 6.7 138 71-217 200-354 (364)
80 3gwz_A MMCR; methyltransferase 99.5 2.2E-14 7.5E-19 117.1 9.2 132 71-215 201-355 (369)
81 3iv6_A Putative Zn-dependent a 99.5 6.3E-15 2.2E-19 114.1 4.9 84 71-161 44-149 (261)
82 2r3s_A Uncharacterized protein 99.5 4.1E-15 1.4E-19 119.8 3.5 136 71-216 164-323 (335)
83 3m70_A Tellurite resistance pr 99.5 1.9E-14 6.6E-19 113.4 7.0 121 71-216 119-260 (286)
84 2ip2_A Probable phenazine-spec 99.5 1.9E-14 6.6E-19 115.9 6.9 131 74-216 169-322 (334)
85 1tw3_A COMT, carminomycin 4-O- 99.5 1.7E-14 5.7E-19 117.4 6.4 135 71-217 182-340 (360)
86 1qzz_A RDMB, aclacinomycin-10- 99.5 1.1E-14 3.8E-19 119.1 5.3 135 71-217 181-340 (374)
87 1x19_A CRTF-related protein; m 99.5 2.1E-14 7.3E-19 116.8 6.5 137 71-217 189-349 (359)
88 3orh_A Guanidinoacetate N-meth 99.5 5.5E-15 1.9E-19 113.4 2.8 127 71-220 59-214 (236)
89 1fp2_A Isoflavone O-methyltran 99.5 1.9E-14 6.7E-19 116.7 6.1 135 71-216 187-341 (352)
90 1fp1_D Isoliquiritigenin 2'-O- 99.5 9.2E-15 3.1E-19 119.5 3.7 136 71-216 208-360 (372)
91 4a6d_A Hydroxyindole O-methylt 99.5 4.7E-14 1.6E-18 114.4 7.7 136 71-217 178-335 (353)
92 3bgv_A MRNA CAP guanine-N7 met 99.5 9E-14 3.1E-18 111.0 8.4 147 71-217 33-233 (313)
93 3g07_A 7SK snRNA methylphospha 99.5 3.4E-15 1.2E-19 118.1 0.2 90 118-216 174-269 (292)
94 3q87_B N6 adenine specific DNA 99.5 6.8E-13 2.3E-17 96.6 11.6 109 71-217 22-150 (170)
95 3g5t_A Trans-aconitate 3-methy 99.5 2.8E-14 9.6E-19 113.2 4.0 86 71-162 35-151 (299)
96 3hp7_A Hemolysin, putative; st 99.4 2.5E-13 8.6E-18 106.3 9.0 128 71-217 84-233 (291)
97 3m33_A Uncharacterized protein 99.4 2.9E-13 9.9E-18 103.1 7.1 105 71-220 47-171 (226)
98 4df3_A Fibrillarin-like rRNA/T 99.4 5.5E-13 1.9E-17 101.2 8.3 120 68-215 73-216 (233)
99 3mq2_A 16S rRNA methyltransfer 99.4 7E-13 2.4E-17 100.3 8.6 131 71-220 26-188 (218)
100 1zx0_A Guanidinoacetate N-meth 99.4 8.6E-14 2.9E-18 106.7 3.5 87 71-162 59-172 (236)
101 2qe6_A Uncharacterized protein 99.4 1.1E-12 3.8E-17 102.7 9.1 128 72-213 77-239 (274)
102 1zg3_A Isoflavanone 4'-O-methy 99.4 1.2E-13 4E-18 112.4 3.6 136 71-216 192-347 (358)
103 1xdz_A Methyltransferase GIDB; 99.4 4.5E-12 1.5E-16 97.3 12.2 108 71-216 69-202 (240)
104 3opn_A Putative hemolysin; str 99.4 7.8E-13 2.7E-17 101.0 7.3 128 71-217 36-185 (232)
105 3mti_A RRNA methylase; SAM-dep 99.4 7.1E-13 2.4E-17 97.6 6.7 86 71-162 21-137 (185)
106 3grz_A L11 mtase, ribosomal pr 99.4 6.9E-13 2.4E-17 99.3 6.7 105 71-215 59-184 (205)
107 3p2e_A 16S rRNA methylase; met 99.4 1E-12 3.5E-17 99.9 6.9 135 71-219 23-188 (225)
108 3hm2_A Precorrin-6Y C5,15-meth 99.4 3.6E-12 1.2E-16 93.1 9.4 111 71-221 24-158 (178)
109 1yzh_A TRNA (guanine-N(7)-)-me 99.3 3.8E-12 1.3E-16 96.0 9.3 86 71-160 40-156 (214)
110 3e05_A Precorrin-6Y C5,15-meth 99.3 1.4E-11 4.7E-16 92.2 11.1 101 71-210 39-162 (204)
111 2nxc_A L11 mtase, ribosomal pr 99.3 4.1E-12 1.4E-16 98.4 8.5 104 71-215 119-243 (254)
112 3fzg_A 16S rRNA methylase; met 99.3 1.9E-13 6.6E-18 99.5 -0.1 84 71-160 48-152 (200)
113 3htx_A HEN1; HEN1, small RNA m 99.3 6E-12 2.1E-16 109.7 8.9 89 71-163 720-837 (950)
114 2ld4_A Anamorsin; methyltransf 99.3 1.6E-11 5.6E-16 89.6 10.1 120 70-215 10-133 (176)
115 3evz_A Methyltransferase; NYSG 99.3 7.1E-12 2.4E-16 95.5 8.1 111 71-215 54-205 (230)
116 3njr_A Precorrin-6Y methylase; 99.3 3.8E-11 1.3E-15 89.9 11.2 108 71-221 54-185 (204)
117 3dxy_A TRNA (guanine-N(7)-)-me 99.3 8.5E-12 2.9E-16 94.4 7.6 86 71-160 33-150 (218)
118 2fca_A TRNA (guanine-N(7)-)-me 99.3 1.6E-11 5.4E-16 92.6 8.7 86 71-160 37-153 (213)
119 1af7_A Chemotaxis receptor met 99.3 2.5E-12 8.6E-17 100.3 4.4 41 119-159 211-251 (274)
120 3g89_A Ribosomal RNA small sub 99.3 5.4E-11 1.8E-15 91.8 11.4 108 71-216 79-212 (249)
121 3sso_A Methyltransferase; macr 99.2 3.6E-12 1.2E-16 103.3 4.5 120 34-163 182-327 (419)
122 3b5i_A S-adenosyl-L-methionine 99.2 5.3E-11 1.8E-15 96.4 11.2 148 71-218 51-300 (374)
123 2b3t_A Protein methyltransfera 99.2 6.8E-12 2.3E-16 98.3 5.7 109 71-214 108-261 (276)
124 1l3i_A Precorrin-6Y methyltran 99.2 3.3E-11 1.1E-15 88.8 8.5 104 71-215 32-159 (192)
125 2yxd_A Probable cobalt-precorr 99.2 9.3E-11 3.2E-15 85.7 10.4 104 71-218 34-159 (183)
126 4dzr_A Protein-(glutamine-N5) 99.2 5.8E-12 2E-16 94.6 3.9 85 71-159 29-163 (215)
127 3bwc_A Spermidine synthase; SA 99.2 4.4E-11 1.5E-15 95.0 9.2 115 71-215 94-239 (304)
128 3fpf_A Mtnas, putative unchara 99.2 1.8E-11 6E-16 95.8 6.7 83 70-161 120-223 (298)
129 1ej0_A FTSJ; methyltransferase 99.2 3.3E-11 1.1E-15 87.6 7.6 87 71-163 21-139 (180)
130 1fbn_A MJ fibrillarin homologu 99.2 1.1E-10 3.8E-15 88.9 10.7 116 70-216 72-213 (230)
131 3lpm_A Putative methyltransfer 99.2 6.7E-11 2.3E-15 91.8 9.3 109 72-216 49-201 (259)
132 2frn_A Hypothetical protein PH 99.2 7E-11 2.4E-15 92.6 9.3 110 71-215 124-256 (278)
133 1p91_A Ribosomal RNA large sub 99.2 4.7E-11 1.6E-15 93.1 8.1 83 71-166 84-184 (269)
134 3eey_A Putative rRNA methylase 99.2 1.5E-11 5.1E-16 91.4 5.0 88 71-163 21-142 (197)
135 1jsx_A Glucose-inhibited divis 99.2 3.1E-11 1E-15 90.4 5.4 78 72-159 65-164 (207)
136 1dus_A MJ0882; hypothetical pr 99.2 3.9E-11 1.3E-15 88.5 5.9 86 71-163 51-160 (194)
137 3id6_C Fibrillarin-like rRNA/T 99.2 2E-10 6.7E-15 87.3 9.7 119 69-216 73-216 (232)
138 3dmg_A Probable ribosomal RNA 99.2 5.9E-11 2E-15 96.9 7.3 85 71-161 232-341 (381)
139 1nt2_A Fibrillarin-like PRE-rR 99.1 4.6E-11 1.6E-15 89.8 6.1 81 70-159 55-160 (210)
140 3giw_A Protein of unknown func 99.1 3.8E-11 1.3E-15 92.9 5.7 81 124-213 163-244 (277)
141 2plw_A Ribosomal RNA methyltra 99.1 9.3E-11 3.2E-15 87.3 7.3 91 71-163 21-157 (201)
142 2ipx_A RRNA 2'-O-methyltransfe 99.1 6.3E-11 2.2E-15 90.4 6.3 84 70-160 75-182 (233)
143 3bzb_A Uncharacterized protein 99.1 1.6E-10 5.6E-15 90.7 8.3 82 71-159 78-204 (281)
144 3mb5_A SAM-dependent methyltra 99.1 9.1E-11 3.1E-15 90.7 6.6 105 70-214 91-220 (255)
145 3p9n_A Possible methyltransfer 99.1 7.3E-11 2.5E-15 87.1 5.7 88 71-164 43-157 (189)
146 3kr9_A SAM-dependent methyltra 99.1 2.5E-10 8.5E-15 86.2 8.6 105 71-215 14-142 (225)
147 3lec_A NADB-rossmann superfami 99.1 2.4E-10 8.3E-15 86.4 8.4 105 71-215 20-148 (230)
148 3q7e_A Protein arginine N-meth 99.1 1.3E-10 4.5E-15 94.0 7.0 82 71-158 65-171 (349)
149 1yb2_A Hypothetical protein TA 99.1 2.2E-10 7.6E-15 89.6 8.0 106 70-215 108-236 (275)
150 4dcm_A Ribosomal RNA large sub 99.1 1.5E-10 5.3E-15 94.3 6.8 86 71-160 221-334 (375)
151 3lbf_A Protein-L-isoaspartate 99.1 9.6E-11 3.3E-15 87.9 5.0 78 71-162 76-176 (210)
152 3r0q_C Probable protein argini 99.1 1.6E-10 5.5E-15 94.4 6.5 83 71-160 62-169 (376)
153 2p41_A Type II methyltransfera 99.1 9.5E-10 3.2E-14 87.2 10.4 85 71-163 81-194 (305)
154 2nyu_A Putative ribosomal RNA 99.1 3.5E-10 1.2E-14 83.8 7.3 94 71-164 21-149 (196)
155 3gnl_A Uncharacterized protein 99.1 4.9E-10 1.7E-14 85.4 8.1 105 71-215 20-148 (244)
156 2oxt_A Nucleoside-2'-O-methylt 99.1 9.2E-10 3.1E-14 85.5 9.7 85 71-163 73-188 (265)
157 1o54_A SAM-dependent O-methylt 99.0 5.3E-10 1.8E-14 87.5 8.0 106 70-215 110-238 (277)
158 4azs_A Methyltransferase WBDD; 99.0 3.2E-11 1.1E-15 103.7 0.8 85 71-161 65-174 (569)
159 2pjd_A Ribosomal RNA small sub 99.0 3.7E-11 1.3E-15 97.1 1.2 88 71-162 195-305 (343)
160 3ckk_A TRNA (guanine-N(7)-)-me 99.0 2.5E-10 8.6E-15 87.3 5.7 86 71-160 45-168 (235)
161 2fyt_A Protein arginine N-meth 99.0 3.3E-10 1.1E-14 91.3 6.0 79 71-157 63-168 (340)
162 2efj_A 3,7-dimethylxanthine me 99.0 1.2E-09 4.3E-14 88.5 9.0 144 73-217 53-293 (384)
163 3lcv_B Sisomicin-gentamicin re 99.0 6.3E-10 2.1E-14 84.9 6.6 122 71-217 131-273 (281)
164 1vbf_A 231AA long hypothetical 99.0 3.9E-10 1.3E-14 85.8 5.4 79 71-163 69-168 (231)
165 2pwy_A TRNA (adenine-N(1)-)-me 99.0 1.5E-09 5.2E-14 83.8 8.8 105 70-215 94-223 (258)
166 3gdh_A Trimethylguanosine synt 99.0 3.2E-12 1.1E-16 98.1 -6.3 80 72-159 78-180 (241)
167 2yxe_A Protein-L-isoaspartate 99.0 4E-10 1.4E-14 84.8 5.2 81 71-162 76-179 (215)
168 1g8a_A Fibrillarin-like PRE-rR 99.0 4.5E-09 1.5E-13 79.7 11.1 85 70-159 71-177 (227)
169 1ws6_A Methyltransferase; stru 99.0 3.6E-10 1.2E-14 81.7 4.7 84 72-165 41-152 (171)
170 3dou_A Ribosomal RNA large sub 99.0 2.3E-09 7.8E-14 79.3 9.1 89 71-165 24-144 (191)
171 2y1w_A Histone-arginine methyl 99.0 4E-10 1.4E-14 91.2 5.2 82 71-159 49-154 (348)
172 2ift_A Putative methylase HI07 99.0 4.2E-10 1.4E-14 83.9 4.8 84 72-163 53-166 (201)
173 3u81_A Catechol O-methyltransf 99.0 3.8E-10 1.3E-14 85.4 4.6 87 71-163 57-173 (221)
174 1g6q_1 HnRNP arginine N-methyl 99.0 8.4E-10 2.9E-14 88.5 6.8 82 71-158 37-143 (328)
175 3adn_A Spermidine synthase; am 99.0 9.7E-10 3.3E-14 86.7 7.0 86 71-160 82-198 (294)
176 2igt_A SAM dependent methyltra 99.0 1.4E-09 4.8E-14 87.2 8.0 83 71-161 152-273 (332)
177 2ozv_A Hypothetical protein AT 99.0 4.4E-09 1.5E-13 81.6 10.5 89 71-159 35-169 (260)
178 1dl5_A Protein-L-isoaspartate 99.0 4.5E-10 1.5E-14 89.7 4.7 81 71-162 74-177 (317)
179 1ixk_A Methyltransferase; open 99.0 1.4E-09 4.9E-14 86.6 7.5 115 70-214 116-273 (315)
180 2bm8_A Cephalosporin hydroxyla 98.9 1.6E-09 5.5E-14 82.8 7.4 85 72-161 81-188 (236)
181 2fpo_A Methylase YHHF; structu 98.9 1E-09 3.5E-14 81.9 6.1 84 72-163 54-163 (202)
182 3ntv_A MW1564 protein; rossman 98.9 9.3E-10 3.2E-14 83.9 5.7 83 71-162 70-178 (232)
183 2wa2_A Non-structural protein 98.9 1.5E-09 5E-14 84.8 6.5 86 71-164 81-197 (276)
184 3r3h_A O-methyltransferase, SA 98.9 1.4E-09 4.9E-14 83.4 6.2 85 71-163 59-173 (242)
185 2fhp_A Methylase, putative; al 98.9 7.8E-10 2.7E-14 81.2 4.2 87 71-165 43-159 (187)
186 2esr_A Methyltransferase; stru 98.9 7.6E-10 2.6E-14 80.7 4.1 87 71-165 30-143 (177)
187 1m6e_X S-adenosyl-L-methionnin 98.9 4E-09 1.4E-13 84.9 8.3 148 71-218 50-282 (359)
188 3uwp_A Histone-lysine N-methyl 98.9 7.4E-10 2.5E-14 90.1 3.7 89 70-165 171-293 (438)
189 3tfw_A Putative O-methyltransf 98.9 2.8E-09 9.5E-14 82.1 6.8 85 71-163 62-173 (248)
190 2h00_A Methyltransferase 10 do 98.9 1.1E-10 3.9E-15 90.2 -1.6 132 72-217 65-239 (254)
191 3c3p_A Methyltransferase; NP_9 98.9 3.5E-09 1.2E-13 79.3 6.7 82 71-161 55-161 (210)
192 3tr6_A O-methyltransferase; ce 98.9 4.2E-09 1.4E-13 79.7 6.6 85 71-163 63-177 (225)
193 1jg1_A PIMT;, protein-L-isoasp 98.8 1.4E-09 4.8E-14 83.0 3.9 80 71-163 90-192 (235)
194 2b25_A Hypothetical protein; s 98.8 1.9E-09 6.4E-14 86.8 4.7 133 71-217 104-282 (336)
195 3gjy_A Spermidine synthase; AP 98.8 1.7E-09 5.8E-14 85.6 4.3 85 74-162 91-202 (317)
196 3duw_A OMT, O-methyltransferas 98.8 5E-09 1.7E-13 79.2 6.7 85 71-163 57-170 (223)
197 1o9g_A RRNA methyltransferase; 98.8 3.9E-09 1.3E-13 81.3 6.0 43 119-161 166-215 (250)
198 1ne2_A Hypothetical protein TA 98.8 2.7E-08 9.3E-13 73.8 10.3 74 71-150 50-139 (200)
199 2gpy_A O-methyltransferase; st 98.8 1.5E-09 5.2E-14 82.7 3.4 83 71-162 53-162 (233)
200 2yvl_A TRMI protein, hypotheti 98.8 7.5E-09 2.6E-13 79.4 6.8 78 71-161 90-191 (248)
201 3dr5_A Putative O-methyltransf 98.8 4E-09 1.4E-13 79.8 5.0 81 73-161 57-164 (221)
202 3frh_A 16S rRNA methylase; met 98.8 2.7E-09 9.1E-14 80.6 3.9 81 71-159 104-205 (253)
203 2vdv_E TRNA (guanine-N(7)-)-me 98.8 8.8E-09 3E-13 79.2 7.0 84 71-160 48-173 (246)
204 1u2z_A Histone-lysine N-methyl 98.8 1.5E-09 5E-14 89.7 2.6 86 70-162 240-361 (433)
205 2o07_A Spermidine synthase; st 98.8 6.5E-09 2.2E-13 82.4 6.0 86 71-160 94-209 (304)
206 2i7c_A Spermidine synthase; tr 98.8 4.9E-09 1.7E-13 82.3 5.2 86 71-160 77-192 (283)
207 1xj5_A Spermidine synthase 1; 98.8 6.1E-09 2.1E-13 83.5 5.7 85 71-159 119-234 (334)
208 4dmg_A Putative uncharacterize 98.8 7.2E-08 2.5E-12 79.0 12.0 86 71-162 213-328 (393)
209 1iy9_A Spermidine synthase; ro 98.8 8.7E-09 3E-13 80.5 6.1 87 71-160 74-189 (275)
210 3cbg_A O-methyltransferase; cy 98.8 9.3E-09 3.2E-13 78.3 6.0 85 71-163 71-185 (232)
211 3ajd_A Putative methyltransfer 98.8 1.5E-08 5E-13 79.2 7.0 90 71-163 82-214 (274)
212 3a27_A TYW2, uncharacterized p 98.8 3.6E-08 1.2E-12 76.9 9.2 83 71-163 118-222 (272)
213 2yxl_A PH0851 protein, 450AA l 98.8 1.6E-08 5.5E-13 84.4 7.6 92 70-164 257-393 (450)
214 1wy7_A Hypothetical protein PH 98.8 1E-07 3.4E-12 71.1 11.1 109 71-217 48-176 (207)
215 1uir_A Polyamine aminopropyltr 98.8 6.8E-09 2.3E-13 82.7 4.9 86 71-160 76-195 (314)
216 2b2c_A Spermidine synthase; be 98.8 7.2E-09 2.5E-13 82.4 5.1 85 71-160 107-222 (314)
217 1r18_A Protein-L-isoaspartate( 98.7 5.7E-09 1.9E-13 79.2 4.2 83 71-161 83-195 (227)
218 2pt6_A Spermidine synthase; tr 98.7 9.9E-09 3.4E-13 82.0 5.5 86 71-160 115-230 (321)
219 1i1n_A Protein-L-isoaspartate 98.7 9E-09 3.1E-13 77.9 5.1 81 71-162 76-184 (226)
220 3k6r_A Putative transferase PH 98.7 1.1E-07 3.7E-12 74.1 10.7 110 71-215 124-256 (278)
221 1inl_A Spermidine synthase; be 98.7 1.5E-08 5.3E-13 80.0 6.0 86 71-160 89-205 (296)
222 1i9g_A Hypothetical protein RV 98.7 1.8E-08 6.1E-13 78.8 6.2 84 70-163 97-206 (280)
223 3b3j_A Histone-arginine methyl 98.7 3.8E-09 1.3E-13 88.8 2.5 81 71-158 157-261 (480)
224 1sui_A Caffeoyl-COA O-methyltr 98.7 1E-08 3.4E-13 78.9 4.7 83 71-161 78-191 (247)
225 4hc4_A Protein arginine N-meth 98.7 1.9E-08 6.6E-13 81.6 6.0 80 72-158 83-187 (376)
226 2xyq_A Putative 2'-O-methyl tr 98.7 7.3E-08 2.5E-12 75.5 8.9 108 70-214 61-195 (290)
227 2avd_A Catechol-O-methyltransf 98.7 1.8E-08 6.1E-13 76.4 5.1 84 71-162 68-181 (229)
228 1mjf_A Spermidine synthase; sp 98.7 1.3E-08 4.5E-13 79.8 4.4 84 71-160 74-193 (281)
229 2cmg_A Spermidine synthase; tr 98.7 3.7E-08 1.3E-12 76.3 6.7 76 71-160 71-171 (262)
230 1sqg_A SUN protein, FMU protei 98.7 6E-08 2.1E-12 80.5 8.2 91 69-163 243-377 (429)
231 3tm4_A TRNA (guanine N2-)-meth 98.6 9.7E-08 3.3E-12 77.8 8.8 107 71-216 216-352 (373)
232 3m6w_A RRNA methylase; rRNA me 98.6 4.2E-08 1.4E-12 81.8 6.4 91 70-163 99-232 (464)
233 2hnk_A SAM-dependent O-methylt 98.6 4.6E-08 1.6E-12 74.7 6.1 83 71-161 59-182 (239)
234 2pbf_A Protein-L-isoaspartate 98.6 2.8E-08 9.6E-13 75.2 4.1 83 71-161 79-194 (227)
235 3c3y_A Pfomt, O-methyltransfer 98.6 6.1E-08 2.1E-12 74.0 5.9 83 71-161 69-182 (237)
236 2b78_A Hypothetical protein SM 98.6 5E-08 1.7E-12 79.8 5.5 86 71-161 211-332 (385)
237 1wxx_A TT1595, hypothetical pr 98.6 5E-08 1.7E-12 79.8 5.3 85 72-162 209-327 (382)
238 1nv8_A HEMK protein; class I a 98.6 3.1E-08 1.1E-12 77.7 3.7 81 72-159 123-248 (284)
239 3m4x_A NOL1/NOP2/SUN family pr 98.6 5.8E-08 2E-12 80.8 5.1 91 70-163 103-237 (456)
240 2f8l_A Hypothetical protein LM 98.5 3.3E-08 1.1E-12 79.7 3.5 90 71-160 129-256 (344)
241 3tma_A Methyltransferase; thum 98.5 9.1E-08 3.1E-12 77.5 5.8 87 71-160 202-317 (354)
242 3c0k_A UPF0064 protein YCCW; P 98.5 1.6E-07 5.4E-12 77.2 7.0 84 71-161 219-340 (396)
243 2yx1_A Hypothetical protein MJ 98.5 3.2E-07 1.1E-11 73.7 8.6 79 71-163 194-294 (336)
244 2qm3_A Predicted methyltransfe 98.5 6.8E-07 2.3E-11 72.8 10.5 81 71-159 171-277 (373)
245 2as0_A Hypothetical protein PH 98.5 6.7E-08 2.3E-12 79.4 4.3 85 71-162 216-337 (396)
246 3evf_A RNA-directed RNA polyme 98.5 1E-06 3.5E-11 67.7 9.5 92 71-163 73-187 (277)
247 3v97_A Ribosomal RNA large sub 98.5 9E-08 3.1E-12 84.0 3.9 83 71-160 538-657 (703)
248 2frx_A Hypothetical protein YE 98.4 4.4E-07 1.5E-11 76.2 7.2 89 72-163 117-249 (479)
249 2ih2_A Modification methylase 98.4 9E-07 3.1E-11 73.2 8.4 88 71-161 38-165 (421)
250 1yub_A Ermam, rRNA methyltrans 98.4 2.1E-08 7.2E-13 77.0 -1.9 80 71-159 28-144 (245)
251 1zq9_A Probable dimethyladenos 98.3 1.6E-07 5.4E-12 73.7 2.7 21 71-91 27-47 (285)
252 1uwv_A 23S rRNA (uracil-5-)-me 98.3 6.7E-06 2.3E-10 68.3 11.1 83 71-159 285-388 (433)
253 3gcz_A Polyprotein; flavivirus 98.3 2.9E-06 9.9E-11 65.2 7.8 88 71-163 89-204 (282)
254 2h1r_A Dimethyladenosine trans 98.2 2.1E-06 7.2E-11 67.8 5.8 55 71-131 41-116 (299)
255 2jjq_A Uncharacterized RNA met 98.2 3.7E-06 1.3E-10 69.6 7.0 78 71-160 289-387 (425)
256 2okc_A Type I restriction enzy 98.1 1.9E-06 6.6E-11 71.8 3.6 90 71-160 170-307 (445)
257 2k4m_A TR8_protein, UPF0146 pr 98.0 1.4E-05 4.8E-10 55.3 6.9 81 71-163 34-124 (153)
258 3eld_A Methyltransferase; flav 98.0 3.5E-05 1.2E-09 59.7 9.7 87 71-162 80-193 (300)
259 2qy6_A UPF0209 protein YFCK; s 97.9 5.4E-06 1.8E-10 63.9 3.8 62 121-216 173-235 (257)
260 1qam_A ERMC' methyltransferase 97.9 2.1E-06 7.3E-11 65.7 1.0 21 71-91 29-49 (244)
261 2qfm_A Spermine synthase; sper 97.9 7.9E-06 2.7E-10 65.6 4.1 85 71-160 187-314 (364)
262 3gru_A Dimethyladenosine trans 97.9 1E-05 3.6E-10 63.5 4.1 22 71-92 49-70 (295)
263 3o4f_A Spermidine synthase; am 97.8 6.2E-05 2.1E-09 58.8 7.7 87 71-160 82-198 (294)
264 2vz8_A Fatty acid synthase; tr 97.8 1.3E-05 4.3E-10 79.3 4.3 133 71-214 1239-1393(2512)
265 3vyw_A MNMC2; tRNA wobble urid 97.8 7E-05 2.4E-09 58.7 7.6 64 118-218 183-250 (308)
266 3tqs_A Ribosomal RNA small sub 97.7 6.5E-05 2.2E-09 57.8 5.8 22 71-92 28-49 (255)
267 2px2_A Genome polyprotein [con 97.7 8.7E-05 3E-09 56.3 6.2 92 71-163 72-186 (269)
268 3k0b_A Predicted N6-adenine-sp 97.6 3.4E-05 1.1E-09 63.2 3.3 92 71-162 200-352 (393)
269 3bt7_A TRNA (uracil-5-)-methyl 97.5 5.2E-05 1.8E-09 61.6 3.7 20 73-92 214-233 (369)
270 3ldu_A Putative methylase; str 97.5 4.2E-05 1.4E-09 62.5 3.1 92 71-162 194-346 (385)
271 4auk_A Ribosomal RNA large sub 97.5 0.001 3.6E-08 53.4 10.8 71 71-153 210-296 (375)
272 2ar0_A M.ecoki, type I restric 97.5 3.5E-05 1.2E-09 65.7 2.0 90 71-160 168-312 (541)
273 3ldg_A Putative uncharacterize 97.5 9.5E-05 3.2E-09 60.3 4.4 92 71-162 193-345 (384)
274 2dul_A N(2),N(2)-dimethylguano 97.4 9.6E-05 3.3E-09 60.1 4.1 80 72-160 47-164 (378)
275 2r6z_A UPF0341 protein in RSP 97.4 7.3E-05 2.5E-09 57.6 3.1 34 71-110 82-115 (258)
276 4gqb_A Protein arginine N-meth 97.4 0.00011 3.7E-09 63.4 4.4 80 72-157 357-464 (637)
277 3khk_A Type I restriction-modi 97.4 0.0001 3.5E-09 62.9 4.1 104 50-160 229-395 (544)
278 3axs_A Probable N(2),N(2)-dime 97.4 0.00014 4.8E-09 59.4 4.3 82 71-160 51-158 (392)
279 3fut_A Dimethyladenosine trans 97.4 0.00012 4.2E-09 56.7 3.7 22 71-93 46-67 (271)
280 3ua3_A Protein arginine N-meth 97.3 4E-05 1.4E-09 66.3 0.9 38 119-157 493-531 (745)
281 3lkz_A Non-structural protein 97.3 0.0017 5.8E-08 50.3 9.3 89 71-164 93-208 (321)
282 3uzu_A Ribosomal RNA small sub 97.3 0.00012 4.1E-09 57.1 2.7 22 71-92 41-62 (279)
283 3ftd_A Dimethyladenosine trans 97.2 0.0014 4.6E-08 50.2 8.1 37 71-112 30-66 (249)
284 2b9e_A NOL1/NOP2/SUN domain fa 97.1 0.00089 3E-08 52.9 6.3 23 70-92 100-122 (309)
285 3p8z_A Mtase, non-structural p 97.1 0.0055 1.9E-07 45.9 9.8 90 71-165 77-191 (267)
286 3lkd_A Type I restriction-modi 97.1 0.0019 6.6E-08 54.9 8.5 89 71-160 220-358 (542)
287 3s1s_A Restriction endonucleas 97.0 0.0012 4E-08 58.3 6.6 89 71-160 320-465 (878)
288 3v97_A Ribosomal RNA large sub 96.9 0.00081 2.8E-08 59.1 4.8 91 71-161 189-348 (703)
289 3cvo_A Methyltransferase-like 96.8 0.0081 2.8E-07 44.2 8.6 35 119-160 120-154 (202)
290 3c6k_A Spermine synthase; sper 96.7 0.0023 7.9E-08 51.6 5.7 84 71-159 204-330 (381)
291 1qyr_A KSGA, high level kasuga 96.6 0.00078 2.7E-08 51.6 2.3 37 71-113 20-56 (252)
292 1m6y_A S-adenosyl-methyltransf 96.4 0.001 3.5E-08 52.3 1.8 40 71-114 25-64 (301)
293 4fzv_A Putative methyltransfer 96.2 0.0038 1.3E-07 50.3 4.1 91 69-163 145-287 (359)
294 3r24_A NSP16, 2'-O-methyl tran 96.1 0.026 8.7E-07 43.8 7.9 93 68-165 105-222 (344)
295 1rjd_A PPM1P, carboxy methyl t 96.1 0.014 4.9E-07 46.5 6.8 132 72-209 97-281 (334)
296 2wk1_A NOVP; transferase, O-me 95.9 0.0075 2.6E-07 46.8 4.4 40 118-161 206-245 (282)
297 3ll7_A Putative methyltransfer 95.8 0.004 1.4E-07 51.0 2.3 20 72-91 93-112 (410)
298 2zig_A TTHA0409, putative modi 95.2 0.064 2.2E-06 41.9 7.4 97 101-217 22-137 (297)
299 3ufb_A Type I restriction-modi 94.7 0.052 1.8E-06 46.1 6.0 36 50-91 201-236 (530)
300 2zig_A TTHA0409, putative modi 94.3 0.016 5.6E-07 45.3 2.0 37 71-113 234-270 (297)
301 2oyr_A UPF0341 protein YHIQ; a 94.0 0.018 6.2E-07 44.1 1.6 18 74-91 90-107 (258)
302 2uyo_A Hypothetical protein ML 94.0 0.15 5.2E-06 40.1 6.8 134 74-211 104-274 (310)
303 1boo_A Protein (N-4 cytosine-s 93.6 0.29 9.8E-06 38.7 7.9 96 98-216 12-120 (323)
304 3iei_A Leucine carboxyl methyl 92.6 0.32 1.1E-05 38.7 6.8 110 99-214 163-279 (334)
305 3ps9_A TRNA 5-methylaminomethy 92.3 0.41 1.4E-05 41.9 7.6 61 120-214 178-239 (676)
306 3pvc_A TRNA 5-methylaminomethy 92.2 0.72 2.5E-05 40.4 9.2 63 119-215 169-232 (689)
307 1wg8_A Predicted S-adenosylmet 92.1 0.075 2.6E-06 41.1 2.4 37 71-113 21-57 (285)
308 2km1_A Protein DRE2; yeast, an 89.6 0.26 8.8E-06 33.5 3.0 43 116-158 54-96 (136)
309 1i4w_A Mitochondrial replicati 87.1 0.39 1.4E-05 38.4 3.0 20 72-91 58-77 (353)
310 3mag_A VP39; methylated adenin 86.6 2.1 7.3E-05 33.1 6.6 83 72-164 60-142 (307)
311 1g60_A Adenine-specific methyl 84.7 0.59 2E-05 35.6 2.9 36 71-112 211-246 (260)
312 1f8f_A Benzyl alcohol dehydrog 81.8 1 3.6E-05 36.0 3.4 79 70-160 188-289 (371)
313 1eg2_A Modification methylase 77.6 1.3 4.6E-05 34.8 2.7 54 102-159 40-105 (319)
314 3tka_A Ribosomal RNA small sub 73.1 2.5 8.6E-05 33.5 3.1 42 70-114 55-96 (347)
315 4ej6_A Putative zinc-binding d 72.6 4.7 0.00016 32.2 4.8 34 119-160 251-284 (370)
316 1kol_A Formaldehyde dehydrogen 72.5 2.3 7.7E-05 34.4 2.9 38 120-159 253-299 (398)
317 1g60_A Adenine-specific methyl 71.9 5.9 0.0002 29.9 4.9 21 139-159 53-73 (260)
318 1pqw_A Polyketide synthase; ro 71.6 1.8 6.2E-05 31.0 1.9 31 120-159 106-136 (198)
319 3gms_A Putative NADPH:quinone 71.3 3.8 0.00013 32.3 3.9 77 70-160 142-243 (340)
320 3fpc_A NADP-dependent alcohol 71.2 3.3 0.00011 32.8 3.5 79 70-160 164-266 (352)
321 3s2e_A Zinc-containing alcohol 71.0 2.3 7.9E-05 33.5 2.5 78 70-160 164-263 (340)
322 1uuf_A YAHK, zinc-type alcohol 69.9 5 0.00017 32.1 4.3 76 70-159 192-287 (369)
323 2dph_A Formaldehyde dismutase; 67.9 4.6 0.00016 32.6 3.8 86 70-159 183-298 (398)
324 3two_A Mannitol dehydrogenase; 67.8 5.8 0.0002 31.3 4.3 77 70-160 174-265 (348)
325 3ip1_A Alcohol dehydrogenase, 67.3 8.1 0.00028 31.2 5.1 34 120-160 281-318 (404)
326 1ej6_A Lambda2; icosahedral, n 66.7 45 0.0015 30.9 9.8 130 71-205 820-972 (1289)
327 3trk_A Nonstructural polyprote 64.3 2.8 9.6E-05 32.0 1.6 47 120-168 210-267 (324)
328 3uog_A Alcohol dehydrogenase; 63.4 3.4 0.00012 32.9 2.1 77 70-160 187-287 (363)
329 2jhf_A Alcohol dehydrogenase E 63.0 11 0.00038 30.0 5.1 31 121-159 261-292 (374)
330 1pl8_A Human sorbitol dehydrog 61.5 9.9 0.00034 30.0 4.6 33 120-160 241-273 (356)
331 1p0f_A NADP-dependent alcohol 61.5 10 0.00035 30.1 4.7 32 121-160 261-293 (373)
332 1cdo_A Alcohol dehydrogenase; 61.5 11 0.00036 30.1 4.7 32 121-160 262-294 (374)
333 2fzw_A Alcohol dehydrogenase c 60.7 11 0.00037 30.0 4.7 32 121-160 260-292 (373)
334 3g7u_A Cytosine-specific methy 60.4 25 0.00086 28.2 6.7 18 74-91 3-20 (376)
335 1v3u_A Leukotriene B4 12- hydr 59.8 4.6 0.00016 31.6 2.3 31 120-159 213-243 (333)
336 2hwk_A Helicase NSP2; rossman 59.0 6.1 0.00021 30.5 2.6 46 120-165 205-259 (320)
337 2zwa_A Leucine carboxyl methyl 58.7 37 0.0013 29.7 8.0 108 100-214 189-307 (695)
338 3tka_A Ribosomal RNA small sub 58.5 3.8 0.00013 32.5 1.5 30 137-166 251-280 (347)
339 1wg8_A Predicted S-adenosylmet 58.1 6.1 0.00021 30.5 2.6 28 137-164 210-237 (285)
340 3uko_A Alcohol dehydrogenase c 57.3 13 0.00045 29.6 4.6 32 121-160 263-295 (378)
341 2oo3_A Protein involved in cat 56.6 5.7 0.0002 30.6 2.2 85 73-159 92-197 (283)
342 1e3i_A Alcohol dehydrogenase, 56.0 13 0.00043 29.7 4.3 32 121-160 265-297 (376)
343 1e3j_A NADP(H)-dependent ketos 55.4 15 0.00051 28.9 4.6 33 120-160 239-271 (352)
344 4b7c_A Probable oxidoreductase 54.9 5.1 0.00017 31.4 1.7 31 120-159 217-247 (336)
345 4dvj_A Putative zinc-dependent 53.6 13 0.00046 29.4 4.1 33 119-159 237-269 (363)
346 2eih_A Alcohol dehydrogenase; 53.0 9.9 0.00034 29.9 3.2 32 120-160 234-265 (343)
347 3jv7_A ADH-A; dehydrogenase, n 52.8 4.9 0.00017 31.6 1.4 79 70-160 169-270 (345)
348 1zkd_A DUF185; NESG, RPR58, st 52.7 10 0.00035 30.7 3.2 21 71-91 79-99 (387)
349 2d8a_A PH0655, probable L-thre 52.4 9.8 0.00034 29.9 3.1 33 120-160 235-267 (348)
350 1yb5_A Quinone oxidoreductase; 51.8 11 0.00037 29.8 3.2 32 120-160 238-269 (351)
351 3iyl_W VP1; non-enveloped viru 51.8 36 0.0012 31.7 6.6 132 73-209 828-982 (1299)
352 2c0c_A Zinc binding alcohol de 50.3 9.9 0.00034 30.2 2.8 32 120-160 230-261 (362)
353 3qwb_A Probable quinone oxidor 49.8 7.6 0.00026 30.4 2.0 31 120-159 216-246 (334)
354 2py6_A Methyltransferase FKBM; 49.3 11 0.00037 30.7 2.9 22 70-91 224-245 (409)
355 4eye_A Probable oxidoreductase 48.6 12 0.0004 29.5 2.9 77 70-160 157-257 (342)
356 2hcy_A Alcohol dehydrogenase 1 47.1 6 0.0002 31.2 1.0 32 121-160 238-269 (347)
357 2yjg_A Lactate racemase apopro 52.8 4 0.00014 33.6 0.0 45 120-164 275-321 (436)
358 3ggo_A Prephenate dehydrogenas 46.9 25 0.00085 27.3 4.5 76 73-157 33-125 (314)
359 3jyn_A Quinone oxidoreductase; 46.0 6.5 0.00022 30.6 1.1 32 120-160 208-239 (325)
360 1qor_A Quinone oxidoreductase; 45.9 7.7 0.00026 30.2 1.5 32 120-160 208-239 (327)
361 2fi0_A Conserved domain protei 45.0 18 0.00063 21.8 2.8 18 194-211 61-78 (81)
362 4dcm_A Ribosomal RNA large sub 44.3 48 0.0017 26.4 6.0 85 73-160 39-136 (375)
363 1whz_A Hypothetical protein; a 43.9 29 0.00099 20.1 3.5 20 194-213 5-24 (70)
364 3tos_A CALS11; methyltransfera 43.6 11 0.00039 28.5 2.0 40 119-162 180-219 (257)
365 2raf_A Putative dinucleotide-b 43.1 19 0.00064 26.0 3.1 71 71-157 17-87 (209)
366 3fwz_A Inner membrane protein 43.0 27 0.00092 23.2 3.7 17 73-91 7-23 (140)
367 2j3h_A NADP-dependent oxidored 42.2 11 0.00036 29.6 1.7 31 120-159 224-254 (345)
368 1boo_A Protein (N-4 cytosine-s 41.7 16 0.00055 28.5 2.7 37 70-112 250-286 (323)
369 1rjw_A ADH-HT, alcohol dehydro 41.6 19 0.00063 28.2 3.1 32 121-160 230-261 (339)
370 1vpt_A VP39; RNA CAP, poly(A) 41.2 95 0.0033 24.4 6.8 82 73-164 76-157 (348)
371 1m6y_A S-adenosyl-methyltransf 41.2 9 0.00031 29.8 1.2 29 137-165 222-250 (301)
372 1iz0_A Quinone oxidoreductase; 41.2 11 0.00038 28.9 1.7 72 71-159 124-217 (302)
373 4gua_A Non-structural polyprot 41.1 16 0.00055 31.1 2.6 47 119-167 219-276 (670)
374 1wly_A CAAR, 2-haloacrylate re 40.7 14 0.00048 28.8 2.3 32 120-160 213-244 (333)
375 2pv7_A T-protein [includes: ch 40.4 14 0.00047 28.5 2.1 74 74-157 22-96 (298)
376 2g1u_A Hypothetical protein TM 39.1 85 0.0029 21.0 6.3 19 71-91 17-35 (155)
377 1piw_A Hypothetical zinc-type 38.3 12 0.00041 29.6 1.5 34 120-159 242-275 (360)
378 2j8z_A Quinone oxidoreductase; 37.5 14 0.00047 29.2 1.7 32 120-160 230-261 (354)
379 3iht_A S-adenosyl-L-methionine 37.1 1E+02 0.0036 21.4 7.2 21 71-91 39-59 (174)
380 1jvb_A NAD(H)-dependent alcoho 37.0 11 0.00036 29.7 1.0 32 120-159 239-270 (347)
381 4eez_A Alcohol dehydrogenase 1 36.2 29 0.00099 27.1 3.5 21 140-160 243-263 (348)
382 4dup_A Quinone oxidoreductase; 33.2 13 0.00044 29.4 0.9 32 120-160 234-265 (353)
383 4f3n_A Uncharacterized ACR, CO 32.2 23 0.00079 29.1 2.2 75 140-215 279-362 (432)
384 2dq4_A L-threonine 3-dehydroge 31.3 48 0.0016 25.8 4.0 31 121-159 231-261 (343)
385 3g2e_A OORC subunit of 2-oxogl 30.6 71 0.0024 22.8 4.5 32 120-161 69-100 (194)
386 1tt7_A YHFP; alcohol dehydroge 29.8 35 0.0012 26.4 2.9 32 119-159 215-246 (330)
387 1eg2_A Modification methylase 28.2 31 0.0011 26.9 2.3 35 70-110 240-274 (319)
388 3qha_A Putative oxidoreductase 28.0 35 0.0012 26.1 2.6 76 74-159 16-104 (296)
389 2c71_A Glycoside hydrolase, fa 27.8 1.7E+02 0.0056 21.1 6.1 24 137-160 133-156 (216)
390 2jvf_A De novo protein M7; tet 27.6 96 0.0033 18.1 4.6 61 137-220 29-90 (96)
391 1xa0_A Putative NADPH dependen 27.4 23 0.00078 27.5 1.4 31 120-159 215-245 (328)
392 3dmg_A Probable ribosomal RNA 26.7 58 0.002 26.0 3.7 82 73-160 46-139 (381)
393 2c7p_A Modification methylase 26.5 34 0.0012 26.8 2.3 20 72-91 10-29 (327)
394 4f3n_A Uncharacterized ACR, CO 25.3 1.3E+02 0.0046 24.6 5.6 19 73-91 138-156 (432)
395 1ny1_A Probable polysaccharide 25.2 1.4E+02 0.0047 22.0 5.4 49 138-213 178-226 (240)
396 3llv_A Exopolyphosphatase-rela 24.8 71 0.0024 20.8 3.4 17 73-91 6-22 (141)
397 4gbj_A 6-phosphogluconate dehy 23.9 2.2E+02 0.0075 21.6 6.5 76 75-159 7-96 (297)
398 1jg5_A GTP cyclohydrolase I fe 23.9 1.2E+02 0.0043 18.1 4.0 27 194-220 50-76 (83)
399 2ew2_A 2-dehydropantoate 2-red 23.4 89 0.003 23.6 4.2 34 121-159 74-107 (316)
400 3goh_A Alcohol dehydrogenase, 22.9 33 0.0011 26.3 1.6 74 70-159 140-228 (315)
401 3e8x_A Putative NAD-dependent 22.5 1.1E+02 0.0037 21.9 4.4 58 71-132 19-95 (236)
402 3gqv_A Enoyl reductase; medium 22.4 93 0.0032 24.5 4.2 32 120-159 230-262 (371)
403 2f1k_A Prephenate dehydrogenas 22.2 52 0.0018 24.6 2.6 33 120-157 56-88 (279)
404 1g55_A DNA cytosine methyltran 21.7 42 0.0014 26.4 2.0 18 74-91 3-20 (343)
405 3d1l_A Putative NADP oxidoredu 21.4 50 0.0017 24.5 2.3 34 121-159 68-101 (266)
406 3c24_A Putative oxidoreductase 20.5 49 0.0017 25.0 2.1 32 121-157 67-98 (286)
407 1tvm_A PTS system, galactitol- 20.3 1.1E+02 0.0037 19.5 3.5 50 77-130 24-78 (113)
No 1
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.83 E-value=1.3e-20 Score=147.28 Aligned_cols=168 Identities=14% Similarity=0.180 Sum_probs=114.1
Q ss_pred hHHHhh--HHHhhHHHHHHhccCCcccc--hhhhHHhhcccccCCCCCCCCCCCeEEEEcCCCCcchHHHhcCccccccc
Q 045799 25 EEHYQS--KAKKYWDGFYKRHKNKFFKD--RHYLEKDWGNYFSDDSCCPNGNPKVVLEVGCGAGNTIFPLVSHSEFREER 100 (231)
Q Consensus 25 ~~~~~~--~~~~~w~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~ 100 (231)
++.|.+ ++..||+.+|....+.+..+ ..|..+.+.+++.. ...++.+|||||||+|.++..++... +
T Consensus 8 ~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~g~~vLDiGCG~G~~~~~~~~~~-~---- 78 (263)
T 2a14_A 8 GDEYQKHFLPRDYLATYYSFDGSPSPEAEMLKFNLECLHKTFGP----GGLQGDTLIDIGSGPTIYQVLAACDS-F---- 78 (263)
T ss_dssp HHHHHHHCCHHHHHHHHCCCCCSCCHHHHHHHHHHHHHHHHHST----TSCCEEEEEESSCTTCCGGGTTGGGT-E----
T ss_pred hhhhhhccCHHHHHHHhcCCCcccchhhHHHHHHHHHHHHHhcC----CCCCCceEEEeCCCccHHHHHHHHhh-h----
Confidence 445555 46689999998777665554 55777777776632 23567899999999998776554221 0
Q ss_pred eeeeeecCCccccc------------------------------------------------------CC---CCCCCee
Q 045799 101 VNAFVCNVVNDDLS------------------------------------------------------RN---VNPSSVD 123 (231)
Q Consensus 101 ~~~~~~D~~~~~~~------------------------------------------------------~~---~~~~~fD 123 (231)
-+++++|+++.++. .+ ...++||
T Consensus 79 ~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~D~~~~~~~~~~~~~~fD 158 (263)
T 2a14_A 79 QDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRAAVKRVLKCDVHLGNPLAPAVLPLAD 158 (263)
T ss_dssp EEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHHHEEEEEECCTTSSSTTTTCCCCCEE
T ss_pred cceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHHhhhheEEeccccCCCCCCccccCCCC
Confidence 13444444432111 11 1356899
Q ss_pred EEEEeeeeeccCC--CCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeE-EEeeCHHHHH
Q 045799 124 VVTLIFMLSAVSP--KKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTC-SFYFSEDFLS 200 (231)
Q Consensus 124 ~ii~~~~l~~~~~--~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~ 200 (231)
+|++++++||+.+ +++..++++++++|||||.+++.+....+ ++..+.... ..+++.+++.
T Consensus 159 ~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~----------------~~~~g~~~~~~~~~~~~~l~ 222 (263)
T 2a14_A 159 CVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLP----------------SYMVGKREFSCVALEKGEVE 222 (263)
T ss_dssp EEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCC----------------EEEETTEEEECCCCCHHHHH
T ss_pred EeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCc----------------cceeCCeEeeccccCHHHHH
Confidence 9999999999742 46678999999999999999998643221 111111111 1247999999
Q ss_pred HHHHHcCceEEEEEEEe
Q 045799 201 TLFLEAGFSTVDINIHL 217 (231)
Q Consensus 201 ~~l~~~Gf~~~~~~~~~ 217 (231)
++|+++||+++++....
T Consensus 223 ~~l~~aGF~i~~~~~~~ 239 (263)
T 2a14_A 223 QAVLDAGFDIEQLLHSP 239 (263)
T ss_dssp HHHHHTTEEEEEEEEEC
T ss_pred HHHHHCCCEEEEEeecc
Confidence 99999999999988765
No 2
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.82 E-value=9.8e-20 Score=139.81 Aligned_cols=161 Identities=16% Similarity=0.271 Sum_probs=113.0
Q ss_pred HHhhHHHHHHhccCCcccc-hh-hhHHhhcccccCCCCCCCCCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCC
Q 045799 32 AKKYWDGFYKRHKNKFFKD-RH-YLEKDWGNYFSDDSCCPNGNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVV 109 (231)
Q Consensus 32 ~~~~w~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~ 109 (231)
...+|+..|......+... .. .+...+... ..++.+|||||||+|.++..++.. +.+++++|++
T Consensus 32 ~~~~w~~~~~~~~~~~~~~~~~~~l~~~~~~~--------~~~~~~vLDiGcG~G~~~~~l~~~------~~~v~gvD~s 97 (235)
T 3lcc_A 32 EEGGWEKCWEEEITPWDQGRATPLIVHLVDTS--------SLPLGRALVPGCGGGHDVVAMASP------ERFVVGLDIS 97 (235)
T ss_dssp HHHHHHHHHHTTCCTTCCSSCCHHHHHHHHTT--------CSCCEEEEEETCTTCHHHHHHCBT------TEEEEEECSC
T ss_pred CHHHHHHHHhcCCCCcccCCCCHHHHHHHHhc--------CCCCCCEEEeCCCCCHHHHHHHhC------CCeEEEEECC
Confidence 4578999887654433211 11 222222211 134469999999999999988742 3456677766
Q ss_pred cccccC-----------------------CCCCCCeeEEEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCch
Q 045799 110 NDDLSR-----------------------NVNPSSVDVVTLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDF 166 (231)
Q Consensus 110 ~~~~~~-----------------------~~~~~~fD~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~ 166 (231)
+.++.. ..++++||+|++..+++|+++++...+++++.++|+|||.+++.++.....
T Consensus 98 ~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~ 177 (235)
T 3lcc_A 98 ESALAKANETYGSSPKAEYFSFVKEDVFTWRPTELFDLIFDYVFFCAIEPEMRPAWAKSMYELLKPDGELITLMYPITDH 177 (235)
T ss_dssp HHHHHHHHHHHTTSGGGGGEEEECCCTTTCCCSSCEEEEEEESSTTTSCGGGHHHHHHHHHHHEEEEEEEEEEECCCSCC
T ss_pred HHHHHHHHHHhhccCCCcceEEEECchhcCCCCCCeeEEEEChhhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEeccccc
Confidence 544311 124568999999999999977799999999999999999999987655322
Q ss_pred hhhhhhccccccccceEEeCCCeEEEeeCHHHHHHHHHHcCceEEEEEEEeeeeeccccc
Q 045799 167 AQVKLLDRNQMIGDSFYVRGDGTCSFYFSEDFLSTLFLEAGFSTVDINIHLKQIKNRSQD 226 (231)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~~~~~~~~~~~~~ 226 (231)
.. .....++.+++.++|+++||+++++......+..+...
T Consensus 178 ~~--------------------~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~g~ 217 (235)
T 3lcc_A 178 VG--------------------GPPYKVDVSTFEEVLVPIGFKAVSVEENPHAIPTRKGK 217 (235)
T ss_dssp CS--------------------CSSCCCCHHHHHHHHGGGTEEEEEEEECTTCCTTTTTS
T ss_pred CC--------------------CCCccCCHHHHHHHHHHcCCeEEEEEecCCccccccCH
Confidence 10 00123689999999999999999999988887776544
No 3
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.81 E-value=7e-20 Score=141.10 Aligned_cols=142 Identities=15% Similarity=0.204 Sum_probs=104.4
Q ss_pred hhHHhhcccccCCCCCCCCCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC-----------------
Q 045799 53 YLEKDWGNYFSDDSCCPNGNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR----------------- 115 (231)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~----------------- 115 (231)
.+...+...+..+ .++.+|||||||+|.++..++.. +.+++++|+++.++..
T Consensus 27 ~~~~~~~~~l~~~-----~~~~~vLDiGcG~G~~~~~l~~~------~~~v~gvD~s~~~~~~a~~~~~~~~~d~~~~~~ 95 (240)
T 3dli_A 27 LVKARLRRYIPYF-----KGCRRVLDIGCGRGEFLELCKEE------GIESIGVDINEDMIKFCEGKFNVVKSDAIEYLK 95 (240)
T ss_dssp HHHHHHGGGGGGT-----TTCSCEEEETCTTTHHHHHHHHH------TCCEEEECSCHHHHHHHHTTSEEECSCHHHHHH
T ss_pred HHHHHHHHHHhhh-----cCCCeEEEEeCCCCHHHHHHHhC------CCcEEEEECCHHHHHHHHhhcceeeccHHHHhh
Confidence 3444444444433 66789999999999999888743 3456788887665321
Q ss_pred CCCCCCeeEEEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeEEEeeC
Q 045799 116 NVNPSSVDVVTLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYFS 195 (231)
Q Consensus 116 ~~~~~~fD~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (231)
++++++||+|++..+++|+++++...++++++++|||||.+++.++........... . ....+..+++
T Consensus 96 ~~~~~~fD~i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~----~--------~~~~~~~~~~ 163 (240)
T 3dli_A 96 SLPDKYLDGVMISHFVEHLDPERLFELLSLCYSKMKYSSYIVIESPNPTSLYSLINF----Y--------IDPTHKKPVH 163 (240)
T ss_dssp TSCTTCBSEEEEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEECTTSHHHHHHH----T--------TSTTCCSCCC
T ss_pred hcCCCCeeEEEECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCCcchhHHHHHH----h--------cCccccccCC
Confidence 567899999999999999965577999999999999999999987765543221000 0 0111234578
Q ss_pred HHHHHHHHHHcCceEEEEEEEe
Q 045799 196 EDFLSTLFLEAGFSTVDINIHL 217 (231)
Q Consensus 196 ~~~l~~~l~~~Gf~~~~~~~~~ 217 (231)
.+++.++++++||+++++....
T Consensus 164 ~~~l~~~l~~aGf~~~~~~~~~ 185 (240)
T 3dli_A 164 PETLKFILEYLGFRDVKIEFFE 185 (240)
T ss_dssp HHHHHHHHHHHTCEEEEEEEEC
T ss_pred HHHHHHHHHHCCCeEEEEEEec
Confidence 9999999999999999988765
No 4
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.80 E-value=4e-19 Score=136.05 Aligned_cols=149 Identities=18% Similarity=0.287 Sum_probs=101.3
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccc----------------------------cCCCCCCCe
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDL----------------------------SRNVNPSSV 122 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~----------------------------~~~~~~~~f 122 (231)
+++.+|||+|||+|.++..++.. +.+++++|+++.++ ..++++++|
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~~------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 102 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELASK------GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSF 102 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT------TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCE
T ss_pred CCCCeEEEECCCCCHHHHHHHhC------CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCce
Confidence 57789999999999999988744 22445555543321 114467899
Q ss_pred eEEEEeeeeeccCCCCHH---HHHHHHHHhcCCCeEEEEEeccCCchhhhhhh---cc--ccccccceEEeC-----CCe
Q 045799 123 DVVTLIFMLSAVSPKKMP---LILQNIKAVLKPDGYILVCDYAIGDFAQVKLL---DR--NQMIGDSFYVRG-----DGT 189 (231)
Q Consensus 123 D~ii~~~~l~~~~~~~~~---~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~---~~--~~~~~~~~~~~~-----~~~ 189 (231)
|+|++..+++|+ .++. .+++++.++|+|||.+++.++........... .. .......+.... ...
T Consensus 103 D~v~~~~~l~~~--~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (235)
T 3sm3_A 103 DFAVMQAFLTSV--PDPKERSRIIKEVFRVLKPGAYLYLVEFGQNWHLKLYRKRYLHDFPITKEEGSFLARDPETGETEF 180 (235)
T ss_dssp EEEEEESCGGGC--CCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCTTSHHHHHHHHHHHHHHCSTTEEEEECTTTCCEEE
T ss_pred eEEEEcchhhcC--CCHHHHHHHHHHHHHHcCCCeEEEEEECCcchhHHHHHHHhhhhccchhhhcceEecccccCCcce
Confidence 999999999999 5555 89999999999999999988766432211000 00 000111111111 123
Q ss_pred EEEeeCHHHHHHHHHHcCceEEEEEEEeeeeecccccc
Q 045799 190 CSFYFSEDFLSTLFLEAGFSTVDINIHLKQIKNRSQDI 227 (231)
Q Consensus 190 ~~~~~~~~~l~~~l~~~Gf~~~~~~~~~~~~~~~~~~~ 227 (231)
...+++.+++.++|+++||+++++........+..+..
T Consensus 181 ~~~~~~~~~l~~ll~~aGf~~~~~~~~~~~~~~g~~~~ 218 (235)
T 3sm3_A 181 IAHHFTEKELVFLLTDCRFEIDYFRVKELETRTGNKIL 218 (235)
T ss_dssp EEECBCHHHHHHHHHTTTEEEEEEEEEEEECTTSCEEE
T ss_pred eeEeCCHHHHHHHHHHcCCEEEEEEecceeeccCCccc
Confidence 34679999999999999999999988777666555443
No 5
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.80 E-value=6.2e-19 Score=132.30 Aligned_cols=125 Identities=15% Similarity=0.171 Sum_probs=96.9
Q ss_pred CCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc------------------CCCCCCCeeEEEEeeeeecc
Q 045799 73 PKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS------------------RNVNPSSVDVVTLIFMLSAV 134 (231)
Q Consensus 73 ~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~------------------~~~~~~~fD~ii~~~~l~~~ 134 (231)
+.+|||+|||+|.++..++.. +.+++++|+++.++. .++++++||+|++..+++|+
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 115 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL------GHQIEGLEPATRLVELARQTHPSVTFHHGTITDLSDSPKRWAGLLAWYSLIHM 115 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT------TCCEEEECCCHHHHHHHHHHCTTSEEECCCGGGGGGSCCCEEEEEEESSSTTC
T ss_pred CCeEEEecCCCCHHHHHHHhc------CCeEEEEeCCHHHHHHHHHhCCCCeEEeCcccccccCCCCeEEEEehhhHhcC
Confidence 789999999999999988754 235667777655432 14567899999999999999
Q ss_pred CCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeEEEeeCHHHHHHHHHHcCceEEEEE
Q 045799 135 SPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYFSEDFLSTLFLEAGFSTVDIN 214 (231)
Q Consensus 135 ~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~ 214 (231)
+++++..++++++++|+|||.+++.++....... .........+++.+++.++|+++||+++++.
T Consensus 116 ~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 180 (203)
T 3h2b_A 116 GPGELPDALVALRMAVEDGGGLLMSFFSGPSLEP---------------MYHPVATAYRWPLPELAQALETAGFQVTSSH 180 (203)
T ss_dssp CTTTHHHHHHHHHHTEEEEEEEEEEEECCSSCEE---------------ECCSSSCEEECCHHHHHHHHHHTTEEEEEEE
T ss_pred CHHHHHHHHHHHHHHcCCCcEEEEEEccCCchhh---------------hhchhhhhccCCHHHHHHHHHHCCCcEEEEE
Confidence 8779999999999999999999998765544210 0011112456899999999999999999987
Q ss_pred EEee
Q 045799 215 IHLK 218 (231)
Q Consensus 215 ~~~~ 218 (231)
....
T Consensus 181 ~~~~ 184 (203)
T 3h2b_A 181 WDPR 184 (203)
T ss_dssp ECTT
T ss_pred ecCC
Confidence 6543
No 6
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.80 E-value=3.4e-19 Score=134.56 Aligned_cols=157 Identities=17% Similarity=0.193 Sum_probs=109.6
Q ss_pred HHhhHHHHHHhccCCcccchhhhHHhhcccccCCCCCCCCCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcc
Q 045799 32 AKKYWDGFYKRHKNKFFKDRHYLEKDWGNYFSDDSCCPNGNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVND 111 (231)
Q Consensus 32 ~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~ 111 (231)
..++|+.....+...... ...+ ..++..+ .++.+|||+|||+|.++..++.. +.+++++|+++.
T Consensus 13 ~~~~~~~~~~~y~~~~~~-~~~~----~~~~~~~-----~~~~~vLDiGcG~G~~~~~l~~~------~~~v~~vD~s~~ 76 (211)
T 3e23_A 13 TLRFYRGNATAYAERQPR-SATL----TKFLGEL-----PAGAKILELGCGAGYQAEAMLAA------GFDVDATDGSPE 76 (211)
T ss_dssp HHHHHHHSHHHHTTCCCC-CHHH----HHHHTTS-----CTTCEEEESSCTTSHHHHHHHHT------TCEEEEEESCHH
T ss_pred HHHHHHHHHHHHhhccch-hHHH----HHHHHhc-----CCCCcEEEECCCCCHHHHHHHHc------CCeEEEECCCHH
Confidence 455666655555444332 2222 2223222 56789999999999999988854 346778888765
Q ss_pred ccc-----------------CCCCCCCeeEEEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhcc
Q 045799 112 DLS-----------------RNVNPSSVDVVTLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDR 174 (231)
Q Consensus 112 ~~~-----------------~~~~~~~fD~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~ 174 (231)
++. .+ .+++||+|++..+++|++++++..++++++++|||||++++..........
T Consensus 77 ~~~~a~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~------ 149 (211)
T 3e23_A 77 LAAEASRRLGRPVRTMLFHQLD-AIDAYDAVWAHACLLHVPRDELADVLKLIWRALKPGGLFYASYKSGEGEGR------ 149 (211)
T ss_dssp HHHHHHHHHTSCCEECCGGGCC-CCSCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCSSCEE------
T ss_pred HHHHHHHhcCCceEEeeeccCC-CCCcEEEEEecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEEEcCCCcccc------
Confidence 432 12 568999999999999996558899999999999999999997543322110
Q ss_pred ccccccceEEeCCCeEEEeeCHHHHHHHHHHcC-ceEEEEEEEeeeee
Q 045799 175 NQMIGDSFYVRGDGTCSFYFSEDFLSTLFLEAG-FSTVDINIHLKQIK 221 (231)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~G-f~~~~~~~~~~~~~ 221 (231)
...+....+++.+++.++|+++| |+++++......-.
T Consensus 150 ----------~~~~~~~~~~~~~~~~~~l~~aG~f~~~~~~~~~~~~~ 187 (211)
T 3e23_A 150 ----------DKLARYYNYPSEEWLRARYAEAGTWASVAVESSEGKGF 187 (211)
T ss_dssp ----------CTTSCEECCCCHHHHHHHHHHHCCCSEEEEEEEEEECT
T ss_pred ----------cccchhccCCCHHHHHHHHHhCCCcEEEEEEeccCCCC
Confidence 11122235689999999999999 99999887655433
No 7
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.79 E-value=4.8e-19 Score=134.14 Aligned_cols=144 Identities=15% Similarity=0.096 Sum_probs=93.5
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc------------------CCCCCCCeeEEEEeeeee
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS------------------RNVNPSSVDVVTLIFMLS 132 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~------------------~~~~~~~fD~ii~~~~l~ 132 (231)
.++.+|||||||+|.++..++.. +.+++++|+++.++. ..+++++||+|++..+++
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~------~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~l~ 118 (218)
T 3ou2_A 45 NIRGDVLELASGTGYWTRHLSGL------ADRVTALDGSAEMIAEAGRHGLDNVEFRQQDLFDWTPDRQWDAVFFAHWLA 118 (218)
T ss_dssp TSCSEEEEESCTTSHHHHHHHHH------SSEEEEEESCHHHHHHHGGGCCTTEEEEECCTTSCCCSSCEEEEEEESCGG
T ss_pred CCCCeEEEECCCCCHHHHHHHhc------CCeEEEEeCCHHHHHHHHhcCCCCeEEEecccccCCCCCceeEEEEechhh
Confidence 56679999999999999888733 224455555443221 124678999999999999
Q ss_pred ccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeE----EEeeCHHHHHHHHHHcCc
Q 045799 133 AVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTC----SFYFSEDFLSTLFLEAGF 208 (231)
Q Consensus 133 ~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~l~~~Gf 208 (231)
|+++++...+++++.++|+|||.+++.++..+.......... ............+.. ..+++.+++.++|+++||
T Consensus 119 ~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 197 (218)
T 3ou2_A 119 HVPDDRFEAFWESVRSAVAPGGVVEFVDVTDHERRLEQQDDS-EPEVAVRRTLQDGRSFRIVKVFRSPAELTERLTALGW 197 (218)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEEECCCC-------------CEEEEECTTSCEEEEECCCCCHHHHHHHHHHTTE
T ss_pred cCCHHHHHHHHHHHHHHcCCCeEEEEEeCCCCccccchhhhc-ccccceeeecCCcchhhHhhcCCCHHHHHHHHHHCCC
Confidence 996444689999999999999999999877643221110000 000000000111111 236799999999999999
Q ss_pred eEEEEEEEeeeee
Q 045799 209 STVDINIHLKQIK 221 (231)
Q Consensus 209 ~~~~~~~~~~~~~ 221 (231)
+++..........
T Consensus 198 ~v~~~~~~~~~~~ 210 (218)
T 3ou2_A 198 SCSVDEVHPGFLY 210 (218)
T ss_dssp EEEEEEEETTEEE
T ss_pred EEEeeeccccceE
Confidence 9877666554433
No 8
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.79 E-value=2.7e-19 Score=139.30 Aligned_cols=142 Identities=17% Similarity=0.227 Sum_probs=97.7
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC----------------------CCCCCCeeEEEEe
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR----------------------NVNPSSVDVVTLI 128 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~----------------------~~~~~~fD~ii~~ 128 (231)
.++.+|||||||+|..+..++... ...+++++++|+++.|++. .++.++||+|++.
T Consensus 69 ~~~~~vLDlGcGtG~~~~~la~~~--~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~~~d~v~~~ 146 (261)
T 4gek_A 69 QPGTQVYDLGCSLGAATLSVRRNI--HHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIENASMVVLN 146 (261)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTC--CSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCCSEEEEEEE
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhc--CCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccccccccccceee
Confidence 778999999999999999988432 2346678899999877531 2345689999999
Q ss_pred eeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhh--hhc------cccccccce-E-Ee-CCCeEEEeeCHH
Q 045799 129 FMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVK--LLD------RNQMIGDSF-Y-VR-GDGTCSFYFSED 197 (231)
Q Consensus 129 ~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~--~~~------~~~~~~~~~-~-~~-~~~~~~~~~~~~ 197 (231)
++++|+++++...++++++++|||||.+++.+.......... +.. ......+.. . .. .-......++.+
T Consensus 147 ~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~~~~~~~~~~~~~~~~~~~~~~g~s~~ei~~~~~~l~~~~~~~s~~ 226 (261)
T 4gek_A 147 FTLQFLEPSERQALLDKIYQGLNPGGALVLSEKFSFEDAKVGELLFNMHHDFKRANGYSELEISQKRSMLENVMLTDSVE 226 (261)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCSSHHHHHHHHHHHHHHHHHTTGGGSTTHHHHHHHHHHCCCBCHH
T ss_pred eeeeecCchhHhHHHHHHHHHcCCCcEEEEEeccCCCCHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhhcccccCCCHH
Confidence 999999777778899999999999999999886655322110 000 000000000 0 00 000001236889
Q ss_pred HHHHHHHHcCceEEEEE
Q 045799 198 FLSTLFLEAGFSTVDIN 214 (231)
Q Consensus 198 ~l~~~l~~~Gf~~~~~~ 214 (231)
++.++|+++||+.+++.
T Consensus 227 ~~~~~L~~AGF~~ve~~ 243 (261)
T 4gek_A 227 THKARLHKAGFEHSELW 243 (261)
T ss_dssp HHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHcCCCeEEEE
Confidence 99999999999988764
No 9
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.78 E-value=1.3e-18 Score=133.87 Aligned_cols=130 Identities=21% Similarity=0.219 Sum_probs=95.0
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc--------------------CCCCCCCeeEEEEeee
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS--------------------RNVNPSSVDVVTLIFM 130 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~--------------------~~~~~~~fD~ii~~~~ 130 (231)
+++.+|||||||+|.++..++.. +.+++++|+++.++. .++++++||+|++..+
T Consensus 52 ~~~~~vLDiG~G~G~~~~~l~~~------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 125 (242)
T 3l8d_A 52 KKEAEVLDVGCGDGYGTYKLSRT------GYKAVGVDISEVMIQKGKERGEGPDLSFIKGDLSSLPFENEQFEAIMAINS 125 (242)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT------TCEEEEEESCHHHHHHHHTTTCBTTEEEEECBTTBCSSCTTCEEEEEEESC
T ss_pred CCCCeEEEEcCCCCHHHHHHHHc------CCeEEEEECCHHHHHHHHhhcccCCceEEEcchhcCCCCCCCccEEEEcCh
Confidence 56789999999999999988844 224556665543321 2456789999999999
Q ss_pred eeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeEEEeeCHHHHHHHHHHcCceE
Q 045799 131 LSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYFSEDFLSTLFLEAGFST 210 (231)
Q Consensus 131 l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~ 210 (231)
++|+ +++..++++++++|+|||++++.++........... .... ....+...++..++.++++++||++
T Consensus 126 l~~~--~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~--~~~~-------~~~~~~~~~~~~~~~~~l~~~Gf~~ 194 (242)
T 3l8d_A 126 LEWT--EEPLRALNEIKRVLKSDGYACIAILGPTAKPRENSY--PRLY-------GKDVVCNTMMPWEFEQLVKEQGFKV 194 (242)
T ss_dssp TTSS--SCHHHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGG--GGGG-------TCCCSSCCCCHHHHHHHHHHTTEEE
T ss_pred Hhhc--cCHHHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhh--hhhc-------cccccccCCCHHHHHHHHHHcCCEE
Confidence 9999 789999999999999999999988665443221111 0001 1111234589999999999999999
Q ss_pred EEEEEEe
Q 045799 211 VDINIHL 217 (231)
Q Consensus 211 ~~~~~~~ 217 (231)
++.....
T Consensus 195 ~~~~~~~ 201 (242)
T 3l8d_A 195 VDGIGVY 201 (242)
T ss_dssp EEEEEEE
T ss_pred EEeeccc
Confidence 9987553
No 10
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.77 E-value=1.1e-18 Score=136.24 Aligned_cols=172 Identities=16% Similarity=0.210 Sum_probs=105.9
Q ss_pred HHhhHHHhhHHHHHHhccCCcccchhhhHHhhcccccCCCCCCCCCCCeEEEEcCCCCcchHHHhcCccccccceeeeee
Q 045799 27 HYQSKAKKYWDGFYKRHKNKFFKDRHYLEKDWGNYFSDDSCCPNGNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVC 106 (231)
Q Consensus 27 ~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~ 106 (231)
.|+.....+|+..+......+......+...+...+ +++.+|||||||+|.++..++.. ..+++++
T Consensus 13 ~y~~~~a~~yd~~~~~~~~~~~~~~~~~~~~l~~~~--------~~~~~vLDiGcG~G~~~~~l~~~------~~~v~gv 78 (263)
T 3pfg_A 13 DYSGEIAELYDLVHQGKGKDYHREAADLAALVRRHS--------PKAASLLDVACGTGMHLRHLADS------FGTVEGL 78 (263)
T ss_dssp SCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHC--------TTCCEEEEETCTTSHHHHHHTTT------SSEEEEE
T ss_pred ccchhHHHHHHHHhhcCCCCHHHHHHHHHHHHHhhC--------CCCCcEEEeCCcCCHHHHHHHHc------CCeEEEE
Confidence 455445567777664322222221222233332222 55689999999999999988754 2256677
Q ss_pred cCCcccccC------------------CCCCCCeeEEEEee-eeeccC-CCCHHHHHHHHHHhcCCCeEEEEEeccCCch
Q 045799 107 NVVNDDLSR------------------NVNPSSVDVVTLIF-MLSAVS-PKKMPLILQNIKAVLKPDGYILVCDYAIGDF 166 (231)
Q Consensus 107 D~~~~~~~~------------------~~~~~~fD~ii~~~-~l~~~~-~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~ 166 (231)
|+++.++.. ++ +++||+|++.. +++|++ +++...++++++++|+|||.+++.++..+..
T Consensus 79 D~s~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~ 157 (263)
T 3pfg_A 79 ELSADMLAIARRRNPDAVLHHGDMRDFSL-GRRFSAVTCMFSSIGHLAGQAELDAALERFAAHVLPDGVVVVEPWWFPEN 157 (263)
T ss_dssp ESCHHHHHHHHHHCTTSEEEECCTTTCCC-SCCEEEEEECTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEECCCCCTTT
T ss_pred ECCHHHHHHHHhhCCCCEEEECChHHCCc-cCCcCEEEEcCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEEeccChhh
Confidence 776554321 22 67999999998 999994 3477889999999999999999975544331
Q ss_pred hhhhhhc------cc---------------cccccceEEe-CCC--------eEEEeeCHHHHHHHHHHcCceEEEE
Q 045799 167 AQVKLLD------RN---------------QMIGDSFYVR-GDG--------TCSFYFSEDFLSTLFLEAGFSTVDI 213 (231)
Q Consensus 167 ~~~~~~~------~~---------------~~~~~~~~~~-~~~--------~~~~~~~~~~l~~~l~~~Gf~~~~~ 213 (231)
....... .. ..+...+... ..+ ....+|+.+++.++|+++||+++++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~ 234 (263)
T 3pfg_A 158 FTPGYVAAGTVEAGGTTVTRVSHSSREGEATRIEVHYLVAGPDRGITHHEESHRITLFTREQYERAFTAAGLSVEFM 234 (263)
T ss_dssp CCTTEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEETTTEEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEE
T ss_pred ccccccccceeccCCceeEEEEEEEecCcEEEEEEEEEEecCCCcEEEEEEEEEEEeecHHHHHHHHHHCCCEEEEe
Confidence 1000000 00 0001111111 111 1135689999999999999999886
No 11
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.76 E-value=3.7e-19 Score=137.98 Aligned_cols=126 Identities=18% Similarity=0.286 Sum_probs=89.5
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccc---------------------cCCCCCCCeeEEEEee
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDL---------------------SRNVNPSSVDVVTLIF 129 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~---------------------~~~~~~~~fD~ii~~~ 129 (231)
.++.+|||||||+|.++..++... ...++++|+++.++ ..++++++||+|++..
T Consensus 92 ~~~~~vLDiG~G~G~~~~~l~~~~-----~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 166 (254)
T 1xtp_A 92 HGTSRALDCGAGIGRITKNLLTKL-----YATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETATLPPNTYDLIVIQW 166 (254)
T ss_dssp CCCSEEEEETCTTTHHHHHTHHHH-----CSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCCCCSSCEEEEEEES
T ss_pred cCCCEEEEECCCcCHHHHHHHHhh-----cCEEEEEeCCHHHHHHHHHHhccCCceEEEEccHHHCCCCCCCeEEEEEcc
Confidence 567899999999999998887321 11233444433221 1245678999999999
Q ss_pred eeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeEEEeeCHHHHHHHHHHcCce
Q 045799 130 MLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYFSEDFLSTLFLEAGFS 209 (231)
Q Consensus 130 ~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~ 209 (231)
+++|++++++..++++++++|||||.+++.+....... +... ......+++.+++.++|+++||+
T Consensus 167 ~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~--------------~~~~-~~~~~~~~~~~~~~~~l~~aGf~ 231 (254)
T 1xtp_A 167 TAIYLTDADFVKFFKHCQQALTPNGYIFFKENCSTGDR--------------FLVD-KEDSSLTRSDIHYKRLFNESGVR 231 (254)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC--CC--------------EEEE-TTTTEEEBCHHHHHHHHHHHTCC
T ss_pred hhhhCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCccc--------------ceec-ccCCcccCCHHHHHHHHHHCCCE
Confidence 99999766789999999999999999999875332111 0000 11113357999999999999999
Q ss_pred EEEEEEE
Q 045799 210 TVDINIH 216 (231)
Q Consensus 210 ~~~~~~~ 216 (231)
++++...
T Consensus 232 ~~~~~~~ 238 (254)
T 1xtp_A 232 VVKEAFQ 238 (254)
T ss_dssp EEEEEEC
T ss_pred EEEeeec
Confidence 9987654
No 12
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.75 E-value=2.1e-18 Score=133.09 Aligned_cols=139 Identities=15% Similarity=0.115 Sum_probs=94.4
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc------------------CCCCCCCeeEEEEeeeee
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS------------------RNVNPSSVDVVTLIFMLS 132 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~------------------~~~~~~~fD~ii~~~~l~ 132 (231)
.++.+|||||||+|.++..++... .+++++|+++.++. ..+++++||+|++.++++
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~~------~~v~gvD~s~~~~~~a~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~l~ 114 (250)
T 2p7i_A 41 FRPGNLLELGSFKGDFTSRLQEHF------NDITCVEASEEAISHAQGRLKDGITYIHSRFEDAQLPRRYDNIVLTHVLE 114 (250)
T ss_dssp CCSSCEEEESCTTSHHHHHHTTTC------SCEEEEESCHHHHHHHHHHSCSCEEEEESCGGGCCCSSCEEEEEEESCGG
T ss_pred cCCCcEEEECCCCCHHHHHHHHhC------CcEEEEeCCHHHHHHHHHhhhCCeEEEEccHHHcCcCCcccEEEEhhHHH
Confidence 356789999999999999887432 14556666544321 123578999999999999
Q ss_pred ccCCCCHHHHHHHHH-HhcCCCeEEEEEeccCCchhhhhhhccccccccce-EE--eCCCeEEEeeCHHHHHHHHHHcCc
Q 045799 133 AVSPKKMPLILQNIK-AVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSF-YV--RGDGTCSFYFSEDFLSTLFLEAGF 208 (231)
Q Consensus 133 ~~~~~~~~~~l~~~~-~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~l~~~l~~~Gf 208 (231)
|+ +++..++++++ ++|||||.+++.++............ ........ +. .....+..+++.+++.++|+++||
T Consensus 115 ~~--~~~~~~l~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf 191 (250)
T 2p7i_A 115 HI--DDPVALLKRINDDWLAEGGRLFLVCPNANAVSRQIAVK-MGIISHNSAVTEAEFAHGHRCTYALDTLERDASRAGL 191 (250)
T ss_dssp GC--SSHHHHHHHHHHTTEEEEEEEEEEEECTTCHHHHHHHH-TTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHHHTTC
T ss_pred hh--cCHHHHHHHHHHHhcCCCCEEEEEcCChHHHHHHHHHH-cCccccchhcccccccccccccCCHHHHHHHHHHCCC
Confidence 99 78999999999 99999999999886665432211000 00000000 00 001112246899999999999999
Q ss_pred eEEEEEEEee
Q 045799 209 STVDINIHLK 218 (231)
Q Consensus 209 ~~~~~~~~~~ 218 (231)
+++++.....
T Consensus 192 ~~~~~~~~~~ 201 (250)
T 2p7i_A 192 QVTYRSGIFF 201 (250)
T ss_dssp EEEEEEEEEE
T ss_pred eEEEEeeeEe
Confidence 9999876443
No 13
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.75 E-value=8e-18 Score=130.48 Aligned_cols=140 Identities=17% Similarity=0.188 Sum_probs=92.6
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc--------------------CCCCCCCeeEEEEeee
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS--------------------RNVNPSSVDVVTLIFM 130 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~--------------------~~~~~~~fD~ii~~~~ 130 (231)
.++.+|||||||+|.++..++.... .+++++|+++.++. .++++++||+|++..+
T Consensus 43 ~~~~~vLD~GcG~G~~~~~l~~~~~-----~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 117 (253)
T 3g5l_A 43 FNQKTVLDLGCGFGWHCIYAAEHGA-----KKVLGIDLSERMLTEAKRKTTSPVVCYEQKAIEDIAIEPDAYNVVLSSLA 117 (253)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTC-----SEEEEEESCHHHHHHHHHHCCCTTEEEEECCGGGCCCCTTCEEEEEEESC
T ss_pred cCCCEEEEECCCCCHHHHHHHHcCC-----CEEEEEECCHHHHHHHHHhhccCCeEEEEcchhhCCCCCCCeEEEEEchh
Confidence 4788999999999999998874411 14566666543321 2456789999999999
Q ss_pred eeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhh----hhcccc--------ccccceEE---eCCCeEEEeeC
Q 045799 131 LSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVK----LLDRNQ--------MIGDSFYV---RGDGTCSFYFS 195 (231)
Q Consensus 131 l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~----~~~~~~--------~~~~~~~~---~~~~~~~~~~~ 195 (231)
++|+ +++..++++++++|||||.+++....+....... +..... ........ .........++
T Consensus 118 l~~~--~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t 195 (253)
T 3g5l_A 118 LHYI--ASFDDICKKVYINLKSSGSFIFSVEHPVFTADGRQDWYTDETGNKLHWPVDRYFNESMRTSHFLGEDVQKYHRT 195 (253)
T ss_dssp GGGC--SCHHHHHHHHHHHEEEEEEEEEEEECHHHHSSSSCSCEECSSCCEEEEEECCTTCCCEEEEEETTEEEEEECCC
T ss_pred hhhh--hhHHHHHHHHHHHcCCCcEEEEEeCCCccccCccccceeccCCceEEEEeccccccceEEEeeccccCccEecC
Confidence 9999 8899999999999999999999754432111000 000000 00000000 00011122349
Q ss_pred HHHHHHHHHHcCceEEEEEEEe
Q 045799 196 EDFLSTLFLEAGFSTVDINIHL 217 (231)
Q Consensus 196 ~~~l~~~l~~~Gf~~~~~~~~~ 217 (231)
.+++.++|+++||+++++....
T Consensus 196 ~~~~~~~l~~aGF~~~~~~e~~ 217 (253)
T 3g5l_A 196 VTTYIQTLLKNGFQINSVIEPE 217 (253)
T ss_dssp HHHHHHHHHHTTEEEEEEECCC
T ss_pred HHHHHHHHHHcCCeeeeeecCC
Confidence 9999999999999999987544
No 14
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.75 E-value=1.3e-18 Score=137.29 Aligned_cols=139 Identities=15% Similarity=0.194 Sum_probs=94.5
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc------------------------CC-CCCCCeeEE
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS------------------------RN-VNPSSVDVV 125 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~------------------------~~-~~~~~fD~i 125 (231)
.++.+|||||||+|.++..++.. +.+++++|+++.++. .+ +.+++||+|
T Consensus 67 ~~~~~vLDiGcG~G~~~~~l~~~------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v 140 (285)
T 4htf_A 67 PQKLRVLDAGGGEGQTAIKMAER------GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLI 140 (285)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEE
T ss_pred CCCCEEEEeCCcchHHHHHHHHC------CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEE
Confidence 44689999999999999988744 235566666543321 12 467899999
Q ss_pred EEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhcc-ccccccceEE--eCCCeEEEeeCHHHHHHH
Q 045799 126 TLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDR-NQMIGDSFYV--RGDGTCSFYFSEDFLSTL 202 (231)
Q Consensus 126 i~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~l~~~ 202 (231)
++..+++|+ +++..++++++++|||||.+++.++............. ...+...... .....+..+++.+++.++
T Consensus 141 ~~~~~l~~~--~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 218 (285)
T 4htf_A 141 LFHAVLEWV--ADPRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNMVAGNFDYVQAGMPKKKKRTLSPDYPRDPTQVYLW 218 (285)
T ss_dssp EEESCGGGC--SCHHHHHHHHHHTEEEEEEEEEEEEBHHHHHHHHHHTTCHHHHHTTCCCC----CCCSCCBCHHHHHHH
T ss_pred EECchhhcc--cCHHHHHHHHHHHcCCCeEEEEEEeCCchHHHHHHHhcCHHHHhhhccccccccCCCCCCCCHHHHHHH
Confidence 999999999 78999999999999999999998766543221111000 0000000000 001111246899999999
Q ss_pred HHHcCceEEEEEEEe
Q 045799 203 FLEAGFSTVDINIHL 217 (231)
Q Consensus 203 l~~~Gf~~~~~~~~~ 217 (231)
|+++||+++++....
T Consensus 219 l~~aGf~v~~~~~~~ 233 (285)
T 4htf_A 219 LEEAGWQIMGKTGVR 233 (285)
T ss_dssp HHHTTCEEEEEEEES
T ss_pred HHHCCCceeeeeeEE
Confidence 999999999987764
No 15
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.75 E-value=6.3e-18 Score=130.19 Aligned_cols=125 Identities=19% Similarity=0.271 Sum_probs=89.2
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccc-----------------------cCCCCCCCeeEEEE
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDL-----------------------SRNVNPSSVDVVTL 127 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~-----------------------~~~~~~~~fD~ii~ 127 (231)
.++.+|||||||+|.++..++... ..+++++|+++.++ ..++++++||+|++
T Consensus 78 ~~~~~vLDiGcG~G~~~~~l~~~~-----~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~ 152 (241)
T 2ex4_A 78 TGTSCALDCGAGIGRITKRLLLPL-----FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWI 152 (241)
T ss_dssp CCCSEEEEETCTTTHHHHHTTTTT-----CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhc-----CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEE
Confidence 357899999999999998887432 11344555443322 11345678999999
Q ss_pred eeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeEEEeeCHHHHHHHHHHcC
Q 045799 128 IFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYFSEDFLSTLFLEAG 207 (231)
Q Consensus 128 ~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~G 207 (231)
..+++|+++++...+++++.++|+|||.+++.+...... ..+..... ....+.+++.++|+++|
T Consensus 153 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~--------------~~~~~~~~--~~~~~~~~~~~~l~~aG 216 (241)
T 2ex4_A 153 QWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQEG--------------VILDDVDS--SVCRDLDVVRRIICSAG 216 (241)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEBSSS--------------EEEETTTT--EEEEBHHHHHHHHHHTT
T ss_pred cchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEccCCCc--------------ceecccCC--cccCCHHHHHHHHHHcC
Confidence 999999954446699999999999999999987655430 00111111 22458999999999999
Q ss_pred ceEEEEEEE
Q 045799 208 FSTVDINIH 216 (231)
Q Consensus 208 f~~~~~~~~ 216 (231)
|+++++...
T Consensus 217 f~~~~~~~~ 225 (241)
T 2ex4_A 217 LSLLAEERQ 225 (241)
T ss_dssp CCEEEEEEC
T ss_pred CeEEEeeec
Confidence 999998764
No 16
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.75 E-value=6.3e-18 Score=133.69 Aligned_cols=84 Identities=25% Similarity=0.460 Sum_probs=63.7
Q ss_pred CCCeeEEEEeeeeeccCCC--CHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeE-EEeeC
Q 045799 119 PSSVDVVTLIFMLSAVSPK--KMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTC-SFYFS 195 (231)
Q Consensus 119 ~~~fD~ii~~~~l~~~~~~--~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 195 (231)
+++||+|++.++++|++++ ++..++++++++|||||.+++..... ..++....... ..+++
T Consensus 172 ~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~----------------~~~~~~~~~~~~~~~~~ 235 (289)
T 2g72_A 172 PLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALE----------------ESWYLAGEARLTVVPVS 235 (289)
T ss_dssp CSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEES----------------CCEEEETTEEEECCCCC
T ss_pred CCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEecC----------------cceEEcCCeeeeeccCC
Confidence 4569999999999996544 78999999999999999999974221 11122222111 23689
Q ss_pred HHHHHHHHHHcCceEEEEEEEee
Q 045799 196 EDFLSTLFLEAGFSTVDINIHLK 218 (231)
Q Consensus 196 ~~~l~~~l~~~Gf~~~~~~~~~~ 218 (231)
.+++.++|+++||+++++.....
T Consensus 236 ~~~l~~~l~~aGf~~~~~~~~~~ 258 (289)
T 2g72_A 236 EEEVREALVRSGYKVRDLRTYIM 258 (289)
T ss_dssp HHHHHHHHHHTTEEEEEEEEEEC
T ss_pred HHHHHHHHHHcCCeEEEeeEeec
Confidence 99999999999999999887663
No 17
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.74 E-value=1.5e-19 Score=137.31 Aligned_cols=138 Identities=17% Similarity=0.216 Sum_probs=90.8
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc-------------------CCCCCCCeeEEEEeeee
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS-------------------RNVNPSSVDVVTLIFML 131 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~-------------------~~~~~~~fD~ii~~~~l 131 (231)
.++.+|||+|||+|.++..++.. +.+++++|+++.++. .+++ ++||+|++..++
T Consensus 44 ~~~~~vLDiGcG~G~~~~~l~~~------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~l 116 (220)
T 3hnr_A 44 KSFGNVLEFGVGTGNLTNKLLLA------GRTVYGIEPSREMRMIAKEKLPKEFSITEGDFLSFEVP-TSIDTIVSTYAF 116 (220)
T ss_dssp TCCSEEEEECCTTSHHHHHHHHT------TCEEEEECSCHHHHHHHHHHSCTTCCEESCCSSSCCCC-SCCSEEEEESCG
T ss_pred cCCCeEEEeCCCCCHHHHHHHhC------CCeEEEEeCCHHHHHHHHHhCCCceEEEeCChhhcCCC-CCeEEEEECcch
Confidence 46789999999999999988754 335667777654321 1333 799999999999
Q ss_pred eccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEE-eCCCeEEEeeCHHHHHHHHHHcCceE
Q 045799 132 SAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYV-RGDGTCSFYFSEDFLSTLFLEAGFST 210 (231)
Q Consensus 132 ~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~~Gf~~ 210 (231)
+|+++.+...+++++.++|||||.+++.++.............. .....+.. ........+++.+++.++|+++||++
T Consensus 117 ~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v 195 (220)
T 3hnr_A 117 HHLTDDEKNVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEA-AKQRGFHQLANDLQTEYYTRIPVMQTIFENNGFHV 195 (220)
T ss_dssp GGSCHHHHHHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHH-HHHTTCHHHHHHHHHSCCCBHHHHHHHHHHTTEEE
T ss_pred hcCChHHHHHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHH-HHhCCCccchhhcchhhcCCHHHHHHHHHHCCCEE
Confidence 99943333349999999999999999998655443221100000 00000000 00000013468999999999999999
Q ss_pred EEEEEE
Q 045799 211 VDINIH 216 (231)
Q Consensus 211 ~~~~~~ 216 (231)
+.....
T Consensus 196 ~~~~~~ 201 (220)
T 3hnr_A 196 TFTRLN 201 (220)
T ss_dssp EEEECS
T ss_pred EEeecc
Confidence 887644
No 18
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.74 E-value=1.8e-17 Score=126.15 Aligned_cols=136 Identities=17% Similarity=0.181 Sum_probs=95.2
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC--------------------CC-CCCCeeEEEEee
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR--------------------NV-NPSSVDVVTLIF 129 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~--------------------~~-~~~~fD~ii~~~ 129 (231)
.++.+|||||||+|.++..++.. +.+++++|+++.++.. ++ .+.+||+|++..
T Consensus 51 ~~~~~vLdiG~G~G~~~~~l~~~------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~ 124 (227)
T 3e8s_A 51 RQPERVLDLGCGEGWLLRALADR------GIEAVGVDGDRTLVDAARAAGAGEVHLASYAQLAEAKVPVGKDYDLICANF 124 (227)
T ss_dssp TCCSEEEEETCTTCHHHHHHHTT------TCEEEEEESCHHHHHHHHHTCSSCEEECCHHHHHTTCSCCCCCEEEEEEES
T ss_pred CCCCEEEEeCCCCCHHHHHHHHC------CCEEEEEcCCHHHHHHHHHhcccccchhhHHhhcccccccCCCccEEEECc
Confidence 45689999999999999888755 3467888887655421 22 345699999999
Q ss_pred eeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhcccccc-ccceEEeCCCeEEEeeCHHHHHHHHHHcCc
Q 045799 130 MLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMI-GDSFYVRGDGTCSFYFSEDFLSTLFLEAGF 208 (231)
Q Consensus 130 ~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf 208 (231)
+++ . .++..++++++++|+|||.+++.++.........+....... ...+..........+++.+++.++|+++||
T Consensus 125 ~l~-~--~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 201 (227)
T 3e8s_A 125 ALL-H--QDIIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLNALDMAGL 201 (227)
T ss_dssp CCC-S--SCCHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHHHTTE
T ss_pred hhh-h--hhHHHHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCcccceEEEecHHHHHHHHHHcCC
Confidence 999 5 788999999999999999999998766543221111000000 000000001344567899999999999999
Q ss_pred eEEEEEE
Q 045799 209 STVDINI 215 (231)
Q Consensus 209 ~~~~~~~ 215 (231)
+++++..
T Consensus 202 ~~~~~~~ 208 (227)
T 3e8s_A 202 RLVSLQE 208 (227)
T ss_dssp EEEEEEC
T ss_pred eEEEEec
Confidence 9999876
No 19
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.73 E-value=8.6e-18 Score=130.84 Aligned_cols=134 Identities=16% Similarity=0.178 Sum_probs=95.1
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc-----------------------CCCCCCCeeEEEE
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS-----------------------RNVNPSSVDVVTL 127 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~-----------------------~~~~~~~fD~ii~ 127 (231)
.++.+|||||||+|.++..++... .+++++|+++.++. .++++++||+|++
T Consensus 36 ~~~~~vLDiGcG~G~~~~~l~~~~------~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~fD~V~~ 109 (260)
T 1vl5_A 36 KGNEEVLDVATGGGHVANAFAPFV------KKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPFTDERFHIVTC 109 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHGGGS------SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCSCTTCEEEEEE
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhC------CEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCCCCCCCEEEEEE
Confidence 567899999999999998887432 14556665543321 2567789999999
Q ss_pred eeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhh-hhccccccccceEEeCCCeEEEeeCHHHHHHHHHHc
Q 045799 128 IFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVK-LLDRNQMIGDSFYVRGDGTCSFYFSEDFLSTLFLEA 206 (231)
Q Consensus 128 ~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 206 (231)
..+++|+ .++..++++++++|||||.+++.+...+...... +....... ....+..+++..++.++|+++
T Consensus 110 ~~~l~~~--~d~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~l~~a 180 (260)
T 1vl5_A 110 RIAAHHF--PNPASFVSEAYRVLKKGGQLLLVDNSAPENDAFDVFYNYVEKE-------RDYSHHRAWKKSDWLKMLEEA 180 (260)
T ss_dssp ESCGGGC--SCHHHHHHHHHHHEEEEEEEEEEEEEBCSSHHHHHHHHHHHHH-------HCTTCCCCCBHHHHHHHHHHH
T ss_pred hhhhHhc--CCHHHHHHHHHHHcCCCCEEEEEEcCCCCCHHHHHHHHHHHHh-------cCccccCCCCHHHHHHHHHHC
Confidence 9999999 7899999999999999999999876554322110 00000000 011112357899999999999
Q ss_pred CceEEEEEEEeee
Q 045799 207 GFSTVDINIHLKQ 219 (231)
Q Consensus 207 Gf~~~~~~~~~~~ 219 (231)
||+++.+......
T Consensus 181 Gf~~~~~~~~~~~ 193 (260)
T 1vl5_A 181 GFELEELHCFHKT 193 (260)
T ss_dssp TCEEEEEEEEEEE
T ss_pred CCeEEEEEEeecc
Confidence 9999988776543
No 20
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.73 E-value=1e-18 Score=132.33 Aligned_cols=171 Identities=11% Similarity=0.085 Sum_probs=104.7
Q ss_pred HHhhHHHhhHHHHHHhccCCcccchhhhHHhhcccccCCCCCCCCCCCeEEEEcCCCCcchHHHhcCccccccceeeeee
Q 045799 27 HYQSKAKKYWDGFYKRHKNKFFKDRHYLEKDWGNYFSDDSCCPNGNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVC 106 (231)
Q Consensus 27 ~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~ 106 (231)
.|......+|+..+......... .+...+...+. .++.+|||+|||+|.++..++.. .+.+++++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~-------~~~~~vLdiG~G~G~~~~~l~~~-----~~~~v~~~ 72 (219)
T 3dlc_A 8 KFDKKGAKNMDEISKTLFAPIYP---IIAENIINRFG-------ITAGTCIDIGSGPGALSIALAKQ-----SDFSIRAL 72 (219)
T ss_dssp TTSHHHHHHHHHHHHTTTTTHHH---HHHHHHHHHHC-------CCEEEEEEETCTTSHHHHHHHHH-----SEEEEEEE
T ss_pred hhhhcchhhHHHHHHHhhccccH---HHHHHHHHhcC-------CCCCEEEEECCCCCHHHHHHHHc-----CCCeEEEE
Confidence 35555566777776554333221 22233322221 22339999999999999888743 13345555
Q ss_pred cCCccccc------------------------CCCCCCCeeEEEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEecc
Q 045799 107 NVVNDDLS------------------------RNVNPSSVDVVTLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYA 162 (231)
Q Consensus 107 D~~~~~~~------------------------~~~~~~~fD~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~ 162 (231)
|+++.++. .++++++||+|++..+++|+ +++..++++++++|+|||.+++.+..
T Consensus 73 D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~~--~~~~~~l~~~~~~L~pgG~l~~~~~~ 150 (219)
T 3dlc_A 73 DFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIEDNYADLIVSRGSVFFW--EDVATAFREIYRILKSGGKTYIGGGF 150 (219)
T ss_dssp ESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSCTTCEEEEEEESCGGGC--SCHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred ECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCCcccccEEEECchHhhc--cCHHHHHHHHHHhCCCCCEEEEEecc
Confidence 55543321 14567899999999999999 88999999999999999999998755
Q ss_pred CCchhhhhhhccccccccceEEeCCCeEEEeeCHHHHHHHHHHcCceEEEEEE
Q 045799 163 IGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYFSEDFLSTLFLEAGFSTVDINI 215 (231)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~~ 215 (231)
...................|... ......+++.+++.++|+++||+++++..
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~aGf~~v~~~~ 202 (219)
T 3dlc_A 151 GNKELRDSISAEMIRKNPDWKEF-NRKNISQENVERFQNVLDEIGISSYEIIL 202 (219)
T ss_dssp SSHHHHHHHHHHHHHHCTTHHHH-HHHHSSHHHHHHHHHHHHHHTCSSEEEEE
T ss_pred CcHHHHHHHHHHHHHhHHHHHhh-hhhccccCCHHHHHHHHHHcCCCeEEEEe
Confidence 44321111100000000000000 00001246889999999999999887764
No 21
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.72 E-value=2.1e-17 Score=128.85 Aligned_cols=134 Identities=13% Similarity=0.164 Sum_probs=95.5
Q ss_pred CCCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccc---------------------cCCCCCCCeeEEEEe
Q 045799 70 NGNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDL---------------------SRNVNPSSVDVVTLI 128 (231)
Q Consensus 70 ~~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~---------------------~~~~~~~~fD~ii~~ 128 (231)
..++.+|||||||+|.++..++... +.+++++|+++.++ ..++++++||+|++.
T Consensus 53 ~~~~~~vLdiG~G~G~~~~~l~~~~-----~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~ 127 (266)
T 3ujc_A 53 LNENSKVLDIGSGLGGGCMYINEKY-----GAHTHGIDICSNIVNMANERVSGNNKIIFEANDILTKEFPENNFDLIYSR 127 (266)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHH-----CCEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTCCCCTTCEEEEEEE
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHc-----CCEEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccCCCCCCcEEEEeHH
Confidence 4678899999999999999887421 23455666554322 114567899999999
Q ss_pred eeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeEEEeeCHHHHHHHHHHcCc
Q 045799 129 FMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYFSEDFLSTLFLEAGF 208 (231)
Q Consensus 129 ~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf 208 (231)
.+++|++++++..++++++++|||||.+++.++........... ....... ....+++.+++.++++++||
T Consensus 128 ~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~-~~~~~~~--------~~~~~~~~~~~~~~l~~~Gf 198 (266)
T 3ujc_A 128 DAILALSLENKNKLFQKCYKWLKPTGTLLITDYCATEKENWDDE-FKEYVKQ--------RKYTLITVEEYADILTACNF 198 (266)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEESCGGGCCHH-HHHHHHH--------HTCCCCCHHHHHHHHHHTTC
T ss_pred HHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEeccCCcccchHH-HHHHHhc--------CCCCCCCHHHHHHHHHHcCC
Confidence 99999987789999999999999999999988655442110000 0000000 00135789999999999999
Q ss_pred eEEEEEEEe
Q 045799 209 STVDINIHL 217 (231)
Q Consensus 209 ~~~~~~~~~ 217 (231)
+++++....
T Consensus 199 ~~~~~~~~~ 207 (266)
T 3ujc_A 199 KNVVSKDLS 207 (266)
T ss_dssp EEEEEEECH
T ss_pred eEEEEEeCC
Confidence 999887654
No 22
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.72 E-value=2.3e-17 Score=128.52 Aligned_cols=166 Identities=17% Similarity=0.321 Sum_probs=104.0
Q ss_pred HHhhHHHHHHhccCCcccc--hhhhHHhhcccccCCCCCCCCCCCeEEEEcCCCCcchHHHhcCcc--c-----------
Q 045799 32 AKKYWDGFYKRHKNKFFKD--RHYLEKDWGNYFSDDSCCPNGNPKVVLEVGCGAGNTIFPLVSHSE--F----------- 96 (231)
Q Consensus 32 ~~~~w~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~iLdvGcG~G~~~~~l~~~~~--~----------- 96 (231)
...||+.+|......+..+ ..+....+..++.. ...++.+|||||||+|.++..++.... +
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~ 93 (265)
T 2i62_A 18 PRDYLEKYYSFGSRHCAENEILRHLLKNLFKIFCL----GAVKGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLW 93 (265)
T ss_dssp HHHHHHHHHCCCSSCHHHHHHHHHHHHHHHHHHHS----SSCCEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHH
T ss_pred HHHHHHHHhCcCCcchhHHHHHHhhHHHHHHHhcc----cccCCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHH
Confidence 4579999997665543221 11222222233321 135678999999999999887763210 0
Q ss_pred ------ccc--------------------------------ce-eeeeecCCcccccCCCCCCCeeEEEEeeeeeccCCC
Q 045799 97 ------REE--------------------------------RV-NAFVCNVVNDDLSRNVNPSSVDVVTLIFMLSAVSPK 137 (231)
Q Consensus 97 ------~~~--------------------------------~~-~~~~~D~~~~~~~~~~~~~~fD~ii~~~~l~~~~~~ 137 (231)
... .+ .+...|+.......+...++||+|++.++++|+++.
T Consensus 94 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~ 173 (265)
T 2i62_A 94 ELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPD 173 (265)
T ss_dssp HHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSS
T ss_pred HHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCC
Confidence 000 02 334444432211011122799999999999966433
Q ss_pred --CHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCe-EEEeeCHHHHHHHHHHcCceEEEEE
Q 045799 138 --KMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGT-CSFYFSEDFLSTLFLEAGFSTVDIN 214 (231)
Q Consensus 138 --~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~Gf~~~~~~ 214 (231)
++..+++++.++|||||.+++.+..... ++..+... ....++.+++.++|+++||+++++.
T Consensus 174 ~~~~~~~l~~~~~~LkpgG~li~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~ 237 (265)
T 2i62_A 174 LPAYRTALRNLGSLLKPGGFLVMVDALKSS----------------YYMIGEQKFSSLPLGWETVRDAVEEAGYTIEQFE 237 (265)
T ss_dssp HHHHHHHHHHHHTTEEEEEEEEEEEESSCC----------------EEEETTEEEECCCCCHHHHHHHHHHTTCEEEEEE
T ss_pred hHHHHHHHHHHHhhCCCCcEEEEEecCCCc----------------eEEcCCccccccccCHHHHHHHHHHCCCEEEEEE
Confidence 7889999999999999999998643321 12222221 1235789999999999999999998
Q ss_pred EEe
Q 045799 215 IHL 217 (231)
Q Consensus 215 ~~~ 217 (231)
...
T Consensus 238 ~~~ 240 (265)
T 2i62_A 238 VIS 240 (265)
T ss_dssp EEC
T ss_pred Eec
Confidence 766
No 23
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.72 E-value=1.4e-17 Score=128.13 Aligned_cols=134 Identities=17% Similarity=0.202 Sum_probs=94.6
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccc-----------------------cCCCCCCCeeEEEE
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDL-----------------------SRNVNPSSVDVVTL 127 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~-----------------------~~~~~~~~fD~ii~ 127 (231)
.++.+|||||||+|.++..++... .+++++|+++.++ ..++++++||+|++
T Consensus 20 ~~~~~vLDiGcG~G~~~~~l~~~~------~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~ 93 (239)
T 1xxl_A 20 RAEHRVLDIGAGAGHTALAFSPYV------QECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPDDSFDIITC 93 (239)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGS------SEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCTTCEEEEEE
T ss_pred CCCCEEEEEccCcCHHHHHHHHhC------CEEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCCCCCCcEEEEEE
Confidence 678899999999999998887431 1445555544332 12456789999999
Q ss_pred eeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhh-hhccccccccceEEeCCCeEEEeeCHHHHHHHHHHc
Q 045799 128 IFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVK-LLDRNQMIGDSFYVRGDGTCSFYFSEDFLSTLFLEA 206 (231)
Q Consensus 128 ~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 206 (231)
..+++|+ .++..++++++++|||||.+++.+...+...... +....... ..+.+..+++.+++.++|+++
T Consensus 94 ~~~l~~~--~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~ll~~a 164 (239)
T 1xxl_A 94 RYAAHHF--SDVRKAVREVARVLKQDGRFLLVDHYAPEDPVLDEFVNHLNRL-------RDPSHVRESSLSEWQAMFSAN 164 (239)
T ss_dssp ESCGGGC--SCHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHHHH-------HCTTCCCCCBHHHHHHHHHHT
T ss_pred CCchhhc--cCHHHHHHHHHHHcCCCcEEEEEEcCCCCChhHHHHHHHHHHh-------ccccccCCCCHHHHHHHHHHC
Confidence 9999999 7899999999999999999999876554332110 00000000 011122357899999999999
Q ss_pred CceEEEEEEEeee
Q 045799 207 GFSTVDINIHLKQ 219 (231)
Q Consensus 207 Gf~~~~~~~~~~~ 219 (231)
||+++.+......
T Consensus 165 Gf~~~~~~~~~~~ 177 (239)
T 1xxl_A 165 QLAYQDIQKWNLP 177 (239)
T ss_dssp TEEEEEEEEEEEE
T ss_pred CCcEEEEEeecCc
Confidence 9999988776543
No 24
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.72 E-value=1.3e-17 Score=130.02 Aligned_cols=134 Identities=16% Similarity=0.217 Sum_probs=95.9
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc-----------------CCCCCCCeeEEEEeeeeec
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS-----------------RNVNPSSVDVVTLIFMLSA 133 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~-----------------~~~~~~~fD~ii~~~~l~~ 133 (231)
.++.+|||||||+|.++..++.. +.+++++|+++.++. .++++++||+|++..+++|
T Consensus 33 ~~~~~vLDiGcG~G~~~~~l~~~------~~~v~gvD~s~~~~~~a~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 106 (261)
T 3ege_A 33 PKGSVIADIGAGTGGYSVALANQ------GLFVYAVEPSIVMRQQAVVHPQVEWFTGYAENLALPDKSVDGVISILAIHH 106 (261)
T ss_dssp CTTCEEEEETCTTSHHHHHHHTT------TCEEEEECSCHHHHHSSCCCTTEEEECCCTTSCCSCTTCBSEEEEESCGGG
T ss_pred CCCCEEEEEcCcccHHHHHHHhC------CCEEEEEeCCHHHHHHHHhccCCEEEECchhhCCCCCCCEeEEEEcchHhh
Confidence 56789999999999999998842 346778888765543 1456789999999999999
Q ss_pred cCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeEEEeeCHHHHHHHHHHcCceEEEE
Q 045799 134 VSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYFSEDFLSTLFLEAGFSTVDI 213 (231)
Q Consensus 134 ~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~ 213 (231)
+ +++..++++++++|| ||.+++.++.................. ...+..+++.+++. +|+++||+++++
T Consensus 107 ~--~~~~~~l~~~~~~Lk-gG~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~-~l~~aGF~~v~~ 175 (261)
T 3ege_A 107 F--SHLEKSFQEMQRIIR-DGTIVLLTFDIRLAQRIWLYDYFPFLW-------EDALRFLPLDEQIN-LLQENTKRRVEA 175 (261)
T ss_dssp C--SSHHHHHHHHHHHBC-SSCEEEEEECGGGCCCCGGGGTCHHHH-------HHHHTSCCHHHHHH-HHHHHHCSEEEE
T ss_pred c--cCHHHHHHHHHHHhC-CcEEEEEEcCCchhHHHHHHHHHHHHh-------hhhhhhCCCHHHHH-HHHHcCCCceeE
Confidence 9 889999999999999 998888876654322110000000000 00012346778888 999999999998
Q ss_pred EEEeeeee
Q 045799 214 NIHLKQIK 221 (231)
Q Consensus 214 ~~~~~~~~ 221 (231)
........
T Consensus 176 ~~~~~p~~ 183 (261)
T 3ege_A 176 IPFLLPHD 183 (261)
T ss_dssp EECCEETT
T ss_pred EEecCCCc
Confidence 87755544
No 25
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.72 E-value=6.2e-17 Score=122.88 Aligned_cols=132 Identities=20% Similarity=0.216 Sum_probs=91.1
Q ss_pred CCeEEEEcCCCCcchHHHhcCcccc----------ccceeeeeecCCcccccCCCCCCCeeEEEEeeeeeccCCCCHHHH
Q 045799 73 PKVVLEVGCGAGNTIFPLVSHSEFR----------EERVNAFVCNVVNDDLSRNVNPSSVDVVTLIFMLSAVSPKKMPLI 142 (231)
Q Consensus 73 ~~~iLdvGcG~G~~~~~l~~~~~~~----------~~~~~~~~~D~~~~~~~~~~~~~~fD~ii~~~~l~~~~~~~~~~~ 142 (231)
+.+|||||||+|.++..++.....+ ..++.+...|+.. .++++++||+|++..+++|+ +++..+
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~~~vD~s~~~~~~a~~~~~~~~~~d~~~----~~~~~~~fD~v~~~~~l~~~--~~~~~~ 121 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIKIGVEPSERMAEIARKRGVFVLKGTAEN----LPLKDESFDFALMVTTICFV--DDPERA 121 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCCEEEESCHHHHHHHHHTTCEEEECBTTB----CCSCTTCEEEEEEESCGGGS--SCHHHH
T ss_pred CCcEEEeCCCCCHHHHHHHHHhccCCCHHHHHHHHhcCCEEEEccccc----CCCCCCCeeEEEEcchHhhc--cCHHHH
Confidence 7899999999999998886431000 0023444444432 24567899999999999999 789999
Q ss_pred HHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeEEEeeCHHHHHHHHHHcCceEEEEEEEe
Q 045799 143 LQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYFSEDFLSTLFLEAGFSTVDINIHL 217 (231)
Q Consensus 143 l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~~~~ 217 (231)
++++.++|+|||.+++.++.........+... ..... ......+++.+++.++|+++||+++++....
T Consensus 122 l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~--~~~~~-----~~~~~~~~~~~~l~~~l~~~Gf~~~~~~~~~ 189 (219)
T 1vlm_A 122 LKEAYRILKKGGYLIVGIVDRESFLGREYEKN--KEKSV-----FYKNARFFSTEELMDLMRKAGFEEFKVVQTL 189 (219)
T ss_dssp HHHHHHHEEEEEEEEEEEECSSSHHHHHHHHT--TTC-C-----CSTTCCCCCHHHHHHHHHHTTCEEEEEEEEC
T ss_pred HHHHHHHcCCCcEEEEEEeCCccHHHHHHHHH--hcCcc-----hhcccccCCHHHHHHHHHHCCCeEEEEeccc
Confidence 99999999999999998766543321111100 00000 0011245899999999999999999987654
No 26
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.71 E-value=2.7e-17 Score=130.44 Aligned_cols=131 Identities=20% Similarity=0.093 Sum_probs=93.2
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc------------------------CCCCCCCeeEEE
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS------------------------RNVNPSSVDVVT 126 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~------------------------~~~~~~~fD~ii 126 (231)
.++.+|||||||+|.++..++... +.+++++|+++.++. .++++++||+|+
T Consensus 81 ~~~~~vLDiGcG~G~~~~~l~~~~-----~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~ 155 (297)
T 2o57_A 81 QRQAKGLDLGAGYGGAARFLVRKF-----GVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYDFIW 155 (297)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHH-----CCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEEEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHh-----CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCCCCCCEeEEE
Confidence 677899999999999999887431 225566666554321 255678999999
Q ss_pred EeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeEEEeeCHHHHHHHHHHc
Q 045799 127 LIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYFSEDFLSTLFLEA 206 (231)
Q Consensus 127 ~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 206 (231)
+..+++|+ .++..++++++++|||||.+++.++........... ..+...+. ...+.+..++.++++++
T Consensus 156 ~~~~l~~~--~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~---~~~~~~~~------~~~~~~~~~~~~~l~~a 224 (297)
T 2o57_A 156 SQDAFLHS--PDKLKVFQECARVLKPRGVMAITDPMKEDGIDKSSI---QPILDRIK------LHDMGSLGLYRSLAKEC 224 (297)
T ss_dssp EESCGGGC--SCHHHHHHHHHHHEEEEEEEEEEEEEECTTCCGGGG---HHHHHHHT------CSSCCCHHHHHHHHHHT
T ss_pred ecchhhhc--CCHHHHHHHHHHHcCCCeEEEEEEeccCCCCchHHH---HHHHHHhc------CCCCCCHHHHHHHHHHC
Confidence 99999999 669999999999999999999987655432111000 00000000 01245889999999999
Q ss_pred CceEEEEEEEe
Q 045799 207 GFSTVDINIHL 217 (231)
Q Consensus 207 Gf~~~~~~~~~ 217 (231)
||+++++....
T Consensus 225 Gf~~~~~~~~~ 235 (297)
T 2o57_A 225 GLVTLRTFSRP 235 (297)
T ss_dssp TEEEEEEEECH
T ss_pred CCeEEEEEECc
Confidence 99999987654
No 27
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.71 E-value=3.4e-17 Score=129.71 Aligned_cols=153 Identities=15% Similarity=0.208 Sum_probs=96.7
Q ss_pred hhHHhhcccccCCCCCCCCCCCeEEEEcCCCCcchHHHhcC--ccccccceeeeeecCCcccccC---------------
Q 045799 53 YLEKDWGNYFSDDSCCPNGNPKVVLEVGCGAGNTIFPLVSH--SEFREERVNAFVCNVVNDDLSR--------------- 115 (231)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~iLdvGcG~G~~~~~l~~~--~~~~~~~~~~~~~D~~~~~~~~--------------- 115 (231)
++.+.++.++..+ ....++.+|||||||+|.++..++.. ..+....+.++++|++..|+..
T Consensus 35 ~~~~~l~~~l~~~--~~~~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~ 112 (292)
T 2aot_A 35 FMDKKLPGIIGRI--GDTKSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVK 112 (292)
T ss_dssp HHHHTHHHHSSST--TTTCSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEE
T ss_pred HHHHhchhHHhhc--cCCCCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcce
Confidence 4444555554432 01246679999999999876544311 1111112234778877654320
Q ss_pred -----------------CCCCCCeeEEEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhcccccc
Q 045799 116 -----------------NVNPSSVDVVTLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMI 178 (231)
Q Consensus 116 -----------------~~~~~~fD~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~ 178 (231)
++++++||+|++.+++||+ +++..++++++++|||||.+++............+......+
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~fD~V~~~~~l~~~--~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~ 190 (292)
T 2aot_A 113 FAWHKETSSEYQSRMLEKKELQKWDFIHMIQMLYYV--KDIPATLKFFHSLLGTNAKMLIIVVSGSSGWDKLWKKYGSRF 190 (292)
T ss_dssp EEEECSCHHHHHHHHHTTTCCCCEEEEEEESCGGGC--SCHHHHHHHHHHTEEEEEEEEEEEECTTSHHHHHHHHHGGGS
T ss_pred EEEEecchhhhhhhhccccCCCceeEEEEeeeeeec--CCHHHHHHHHHHHcCCCcEEEEEEecCCccHHHHHHHHHHhc
Confidence 1347899999999999999 889999999999999999999986544221110011001111
Q ss_pred ccceEEeCCCeEEEeeCHHHHHHHHHHcCceEEEEEEE
Q 045799 179 GDSFYVRGDGTCSFYFSEDFLSTLFLEAGFSTVDINIH 216 (231)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~~~ 216 (231)
. .+.+..+++.+++.++|+++||+++.....
T Consensus 191 ~-------~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~ 221 (292)
T 2aot_A 191 P-------QDDLCQYITSDDLTQMLDNLGLKYECYDLL 221 (292)
T ss_dssp C-------CCTTCCCCCHHHHHHHHHHHTCCEEEEEEC
T ss_pred c-------CCCcccCCCHHHHHHHHHHCCCceEEEEec
Confidence 1 001234578999999999999998875443
No 28
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.71 E-value=7.8e-17 Score=123.97 Aligned_cols=139 Identities=14% Similarity=0.174 Sum_probs=91.4
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc--------------------CCCCCCCeeEEEEeee
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS--------------------RNVNPSSVDVVTLIFM 130 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~--------------------~~~~~~~fD~ii~~~~ 130 (231)
.++.+|||||||+|.++..++.... .+++++|+++.++. .++++++||+|++..+
T Consensus 42 ~~~~~vLdiG~G~G~~~~~l~~~~~-----~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 116 (243)
T 3bkw_A 42 VGGLRIVDLGCGFGWFCRWAHEHGA-----SYVLGLDLSEKMLARARAAGPDTGITYERADLDKLHLPQDSFDLAYSSLA 116 (243)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTC-----SEEEEEESCHHHHHHHHHTSCSSSEEEEECCGGGCCCCTTCEEEEEEESC
T ss_pred cCCCEEEEEcCcCCHHHHHHHHCCC-----CeEEEEcCCHHHHHHHHHhcccCCceEEEcChhhccCCCCCceEEEEecc
Confidence 5678999999999999988874411 14556665543321 1445789999999999
Q ss_pred eeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhh----hhccccc--cccceEE--------eCCCeEEEeeCH
Q 045799 131 LSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVK----LLDRNQM--IGDSFYV--------RGDGTCSFYFSE 196 (231)
Q Consensus 131 l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~----~~~~~~~--~~~~~~~--------~~~~~~~~~~~~ 196 (231)
++|+ +++..++++++++|+|||.+++.+..+....... ....+.. ....++. .........++.
T Consensus 117 l~~~--~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~ 194 (243)
T 3bkw_A 117 LHYV--EDVARLFRTVHQALSPGGHFVFSTEHPIYMAPARPGWAIDAEGRRTWPIDRYLVEGPRKTDWLAKGVVKHHRTV 194 (243)
T ss_dssp GGGC--SCHHHHHHHHHHHEEEEEEEEEEEECHHHHCCSSCSCEECTTSCEEEEECCTTCCEEECTTHHHHSCCEEECCH
T ss_pred cccc--chHHHHHHHHHHhcCcCcEEEEEeCCcccccCcCcceeecCCCceEEeecccccccceeeeeccCceEEEeccH
Confidence 9999 7899999999999999999999865432100000 0000000 0000000 000122345799
Q ss_pred HHHHHHHHHcCceEEEEEEE
Q 045799 197 DFLSTLFLEAGFSTVDINIH 216 (231)
Q Consensus 197 ~~l~~~l~~~Gf~~~~~~~~ 216 (231)
+++.++|+++||+++++...
T Consensus 195 ~~~~~~l~~aGF~~~~~~~~ 214 (243)
T 3bkw_A 195 GTTLNALIRSGFAIEHVEEF 214 (243)
T ss_dssp HHHHHHHHHTTCEEEEEEEC
T ss_pred HHHHHHHHHcCCEeeeeccC
Confidence 99999999999999998764
No 29
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.71 E-value=2.2e-18 Score=135.34 Aligned_cols=141 Identities=21% Similarity=0.259 Sum_probs=92.9
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc-----------------------CCCCCCCeeEEEE
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS-----------------------RNVNPSSVDVVTL 127 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~-----------------------~~~~~~~fD~ii~ 127 (231)
.++.+|||||||+|.++..++.... ..+++++|+++.++. .++++++||+|++
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~----~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~ 111 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGAQTVILAKNNP----DAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFEDSSFDHIFV 111 (276)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCT----TSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCTTCEEEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCC----CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCCCCCeeEEEE
Confidence 6788999999999999988874311 234556666543321 2456789999999
Q ss_pred eeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhh----hhhccccccccceEEeCCCeEEEeeCHHHHHHHH
Q 045799 128 IFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQV----KLLDRNQMIGDSFYVRGDGTCSFYFSEDFLSTLF 203 (231)
Q Consensus 128 ~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 203 (231)
..+++|+ .++..+++++.++|+|||.+++.+......... ............. ...+ ...++..++.++|
T Consensus 112 ~~~l~~~--~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--~~~~~~~~l~~~l 185 (276)
T 3mgg_A 112 CFVLEHL--QSPEEALKSLKKVLKPGGTITVIEGDHGSCYFHPEGKKAIEAWNCLIRVQ--AYMK--GNSLVGRQIYPLL 185 (276)
T ss_dssp ESCGGGC--SCHHHHHHHHHHHEEEEEEEEEEEECGGGCEEESCCHHHHHHHHHHHHHH--HHTT--CCTTGGGGHHHHH
T ss_pred echhhhc--CCHHHHHHHHHHHcCCCcEEEEEEcCCCCceECCCcHHHHHHHHHHHHHH--HhcC--CCcchHHHHHHHH
Confidence 9999999 778999999999999999999986443211000 0000000000000 0000 1124567899999
Q ss_pred HHcCceEEEEEEEeeeee
Q 045799 204 LEAGFSTVDINIHLKQIK 221 (231)
Q Consensus 204 ~~~Gf~~~~~~~~~~~~~ 221 (231)
+++||+++++........
T Consensus 186 ~~aGf~~v~~~~~~~~~~ 203 (276)
T 3mgg_A 186 QESGFEKIRVEPRMVYID 203 (276)
T ss_dssp HHTTCEEEEEEEEEEEEC
T ss_pred HHCCCCeEEEeeEEEECC
Confidence 999999999987655443
No 30
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.71 E-value=1.4e-17 Score=127.59 Aligned_cols=142 Identities=15% Similarity=0.153 Sum_probs=93.6
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc---------------------CCCCCCCeeEEEEee
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS---------------------RNVNPSSVDVVTLIF 129 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~---------------------~~~~~~~fD~ii~~~ 129 (231)
.++.+|||||||+|.++..++... ...+++++|+++.++. .+++ ++||+|++..
T Consensus 43 ~~~~~vLDiG~G~G~~~~~l~~~~----~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~ 117 (234)
T 3dtn_A 43 TENPDILDLGAGTGLLSAFLMEKY----PEATFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSKYDFE-EKYDMVVSAL 117 (234)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHC----TTCEEEEEESCHHHHHHHHHHTCSCTTEEEEESCTTTCCCC-SCEEEEEEES
T ss_pred CCCCeEEEecCCCCHHHHHHHHhC----CCCeEEEEECCHHHHHHHHHhhccCCCEEEEeCchhccCCC-CCceEEEEeC
Confidence 567899999999999999887432 1335666776654321 1223 7999999999
Q ss_pred eeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhh--cc------ccccccce--EEeCCCeEEEeeCHHHH
Q 045799 130 MLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLL--DR------NQMIGDSF--YVRGDGTCSFYFSEDFL 199 (231)
Q Consensus 130 ~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~--~~------~~~~~~~~--~~~~~~~~~~~~~~~~l 199 (231)
+++|+++.+...++++++++|||||.+++.++........... .. ........ .......+...++.+++
T Consensus 118 ~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (234)
T 3dtn_A 118 SIHHLEDEDKKELYKRSYSILKESGIFINADLVHGETAFIENLNKTIWRQYVENSGLTEEEIAAGYERSKLDKDIEMNQQ 197 (234)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHHHHHHHTSSCCHHHHHTTC----CCCCCBHHHH
T ss_pred ccccCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCChhhhhHHHHHHHHHHHhcCCCHHHHHHHHHhcccccccCHHHH
Confidence 9999954444579999999999999999998766543211000 00 00000000 00001122346899999
Q ss_pred HHHHHHcCceEEEEEEEe
Q 045799 200 STLFLEAGFSTVDINIHL 217 (231)
Q Consensus 200 ~~~l~~~Gf~~~~~~~~~ 217 (231)
.++|+++||+++++....
T Consensus 198 ~~ll~~aGF~~v~~~~~~ 215 (234)
T 3dtn_A 198 LNWLKEAGFRDVSCIYKY 215 (234)
T ss_dssp HHHHHHTTCEEEEEEEEE
T ss_pred HHHHHHcCCCceeeeeee
Confidence 999999999999886543
No 31
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.71 E-value=2.6e-17 Score=126.39 Aligned_cols=137 Identities=14% Similarity=0.203 Sum_probs=87.9
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc------------------CCCCCCCeeEEEEee-ee
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS------------------RNVNPSSVDVVTLIF-ML 131 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~------------------~~~~~~~fD~ii~~~-~l 131 (231)
.++.+|||+|||+|.++..++... .+++++|+++.++. .++ +++||+|++.. ++
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~------~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~~~~ 111 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEF------GDTAGLELSEDMLTHARKRLPDATLHQGDMRDFRL-GRKFSAVVSMFSSV 111 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHH------SEEEEEESCHHHHHHHHHHCTTCEEEECCTTTCCC-SSCEEEEEECTTGG
T ss_pred CCCCeEEEecccCCHHHHHHHHhC------CcEEEEeCCHHHHHHHHHhCCCCEEEECCHHHccc-CCCCcEEEEcCchH
Confidence 567899999999999998887331 14455565544321 122 57899999654 89
Q ss_pred eccC-CCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhcc------c-------------c--ccccceEEeC-C-
Q 045799 132 SAVS-PKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDR------N-------------Q--MIGDSFYVRG-D- 187 (231)
Q Consensus 132 ~~~~-~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~------~-------------~--~~~~~~~~~~-~- 187 (231)
+|++ +++...++++++++|+|||.+++.++............. + . .....+.... .
T Consensus 112 ~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (239)
T 3bxo_A 112 GYLKTTEELGAAVASFAEHLEPGGVVVVEPWWFPETFADGWVSADVVRRDGRTVARVSHSVREGNATRMEVHFTVADPGK 191 (239)
T ss_dssp GGCCSHHHHHHHHHHHHHTEEEEEEEEECCCCCTTTCCTTCEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEETTT
T ss_pred hhcCCHHHHHHHHHHHHHhcCCCeEEEEEeccCcccccccceEeeEEecCCceEEEEEEEecCCCEEEEEEEEEEecCCC
Confidence 9985 356789999999999999999998655443210000000 0 0 0000111111 1
Q ss_pred -------CeEEEeeCHHHHHHHHHHcCceEEEEE
Q 045799 188 -------GTCSFYFSEDFLSTLFLEAGFSTVDIN 214 (231)
Q Consensus 188 -------~~~~~~~~~~~l~~~l~~~Gf~~~~~~ 214 (231)
..+..+++.+++.++|+++||+++.+.
T Consensus 192 ~~~~~~~~~~~~~~t~~~~~~ll~~aGF~v~~~~ 225 (239)
T 3bxo_A 192 GVRHFSDVHLITLFHQAEYEAAFTAAGLRVEYLE 225 (239)
T ss_dssp EEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEES
T ss_pred cceEEEEEEEeeecCHHHHHHHHHHCCCEEEEeE
Confidence 112356899999999999999877753
No 32
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.70 E-value=3.5e-17 Score=124.12 Aligned_cols=124 Identities=19% Similarity=0.235 Sum_probs=92.5
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc-----------------------CCCCCCCeeEEEE
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS-----------------------RNVNPSSVDVVTL 127 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~-----------------------~~~~~~~fD~ii~ 127 (231)
.++.+|||+|||+|.++..++... ....+++++|+++.++. .++++++||+|++
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~---~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~ 112 (219)
T 3dh0_A 36 KEGMTVLDVGTGAGFYLPYLSKMV---GEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLPDNTVDFIFM 112 (219)
T ss_dssp CTTCEEEESSCTTCTTHHHHHHHH---TTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSCSSCEEEEEE
T ss_pred CCCCEEEEEecCCCHHHHHHHHHh---CCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCCCCCeeEEEe
Confidence 567899999999999999887331 01234556666543321 1456789999999
Q ss_pred eeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeEEEeeCHHHHHHHHHHcC
Q 045799 128 IFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYFSEDFLSTLFLEAG 207 (231)
Q Consensus 128 ~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~G 207 (231)
..+++|+ +++..+++++.++|+|||.+++.++........ . ....+++.+++.++++++|
T Consensus 113 ~~~l~~~--~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~------~------------~~~~~~~~~~~~~~l~~~G 172 (219)
T 3dh0_A 113 AFTFHEL--SEPLKFLEELKRVAKPFAYLAIIDWKKEERDKG------P------------PPEEVYSEWEVGLILEDAG 172 (219)
T ss_dssp ESCGGGC--SSHHHHHHHHHHHEEEEEEEEEEEECSSCCSSS------C------------CGGGSCCHHHHHHHHHHTT
T ss_pred ehhhhhc--CCHHHHHHHHHHHhCCCeEEEEEEecccccccC------C------------chhcccCHHHHHHHHHHCC
Confidence 9999999 789999999999999999999987665443110 0 0012468999999999999
Q ss_pred ceEEEEEEEe
Q 045799 208 FSTVDINIHL 217 (231)
Q Consensus 208 f~~~~~~~~~ 217 (231)
|++++.....
T Consensus 173 f~~~~~~~~~ 182 (219)
T 3dh0_A 173 IRVGRVVEVG 182 (219)
T ss_dssp CEEEEEEEET
T ss_pred CEEEEEEeeC
Confidence 9999876643
No 33
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.70 E-value=3.3e-17 Score=130.14 Aligned_cols=140 Identities=12% Similarity=0.130 Sum_probs=91.4
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc--------------------------CCCCCCCeeE
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS--------------------------RNVNPSSVDV 124 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~--------------------------~~~~~~~fD~ 124 (231)
.++.+|||||||+|.++..++.. +.+++++|+++.++. .++ +++||+
T Consensus 81 ~~~~~vLDlGcG~G~~~~~l~~~------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~ 153 (299)
T 3g2m_A 81 PVSGPVLELAAGMGRLTFPFLDL------GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL-DKRFGT 153 (299)
T ss_dssp CCCSCEEEETCTTTTTHHHHHTT------TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC-SCCEEE
T ss_pred CCCCcEEEEeccCCHHHHHHHHc------CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCc-CCCcCE
Confidence 34459999999999999999844 224455555443321 122 679999
Q ss_pred EEEe-eeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhc-------ccc--ccccc-----------eE
Q 045799 125 VTLI-FMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLD-------RNQ--MIGDS-----------FY 183 (231)
Q Consensus 125 ii~~-~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~-------~~~--~~~~~-----------~~ 183 (231)
|++. .+++|+++++...++++++++|+|||.+++..+............ .+. .+... +.
T Consensus 154 v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 233 (299)
T 3g2m_A 154 VVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLAMSEAAESEPLERKQELPGRSGRRYVLHVRHLPAEEIQEITIH 233 (299)
T ss_dssp EEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECCHHHHSCCCCC-------------CCEEEEEEEEEEEEEEE
T ss_pred EEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecCccccccchhccceeecCCCcEEEEEEEEeccccEEEEEEE
Confidence 9865 567777655689999999999999999999877665431100000 000 00000 00
Q ss_pred EeC--------CCeEEEeeCHHHHHHHHHHcCceEEEEEEEe
Q 045799 184 VRG--------DGTCSFYFSEDFLSTLFLEAGFSTVDINIHL 217 (231)
Q Consensus 184 ~~~--------~~~~~~~~~~~~l~~~l~~~Gf~~~~~~~~~ 217 (231)
... ......+++.+++.++|+++||+++++..+.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~~ 275 (299)
T 3g2m_A 234 PADETTDPFVVCTHRRRLLAPDQVVRELVRSGFDVIAQTPFA 275 (299)
T ss_dssp ESCC--CCCCEEEEEEEEECHHHHHHHHHHTTCEEEEEEEEC
T ss_pred eccCCCCcEEEEEEEEEEeCHHHHHHHHHHCCCEEEEEEecC
Confidence 000 1122357999999999999999999988765
No 34
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.70 E-value=1.1e-16 Score=123.89 Aligned_cols=157 Identities=15% Similarity=0.157 Sum_probs=100.5
Q ss_pred HHhhHHHHHHhccCCccc-chh-hhHHhhcccccCCCCCCCCCCCeEEEEcCCCCcchHHHhcCc---------------
Q 045799 32 AKKYWDGFYKRHKNKFFK-DRH-YLEKDWGNYFSDDSCCPNGNPKVVLEVGCGAGNTIFPLVSHS--------------- 94 (231)
Q Consensus 32 ~~~~w~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~iLdvGcG~G~~~~~l~~~~--------------- 94 (231)
..+||+..|......+.. ... .+.+.+..+.. ..++.+|||+|||+|..+..|+...
T Consensus 32 ~~~~Wd~~y~~~~~~~~~~~~~~~l~~~~~~~~~------~~~~~~vLD~GCG~G~~~~~La~~G~~V~gvD~S~~~i~~ 105 (252)
T 2gb4_A 32 TLEDWKEKWVTRHISFHQEQGHQLLKKHLDTFLK------GQSGLRVFFPLCGKAIEMKWFADRGHTVVGVEISEIGIRE 105 (252)
T ss_dssp CHHHHHHHHHHTCCTTCCTTCCHHHHHHHHHHHT------TCCSCEEEETTCTTCTHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred CHHHHHHHHhcCCCCcccCCCCHHHHHHHHHhcc------CCCCCeEEEeCCCCcHHHHHHHHCCCeEEEEECCHHHHHH
Confidence 568999998765433321 111 22333332221 1467899999999999999998330
Q ss_pred ---cc--------------------cccceeeeeecCCcccccCCCCC-CCeeEEEEeeeeeccCCCCHHHHHHHHHHhc
Q 045799 95 ---EF--------------------REERVNAFVCNVVNDDLSRNVNP-SSVDVVTLIFMLSAVSPKKMPLILQNIKAVL 150 (231)
Q Consensus 95 ---~~--------------------~~~~~~~~~~D~~~~~~~~~~~~-~~fD~ii~~~~l~~~~~~~~~~~l~~~~~~L 150 (231)
.. ...++++...|+... ++.+ ++||+|++..+++|+++++...+++++.++|
T Consensus 106 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l----~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~L 181 (252)
T 2gb4_A 106 FFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDL----PRANIGKFDRIWDRGALVAINPGDHDRYADIILSLL 181 (252)
T ss_dssp HHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTG----GGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTE
T ss_pred HHHhcccccccccccccccccccccCCCceEEEECccccC----CcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHc
Confidence 00 012334444444322 2222 7899999999999998778889999999999
Q ss_pred CCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeEEEeeCHHHHHHHHHHcCceEEEEEEEee
Q 045799 151 KPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYFSEDFLSTLFLEAGFSTVDINIHLK 218 (231)
Q Consensus 151 k~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~~~~~ 218 (231)
||||++++.++...... ... ....++.+++.+++.. +|+++.......
T Consensus 182 kpGG~l~l~~~~~~~~~----------~~g---------~~~~~~~~el~~~l~~-~f~v~~~~~~~~ 229 (252)
T 2gb4_A 182 RKEFQYLVAVLSYDPTK----------HAG---------PPFYVPSAELKRLFGT-KCSMQCLEEVDA 229 (252)
T ss_dssp EEEEEEEEEEEECCTTS----------CCC---------SSCCCCHHHHHHHHTT-TEEEEEEEEEEC
T ss_pred CCCeEEEEEEEecCCcc----------CCC---------CCCCCCHHHHHHHhhC-CeEEEEEecccc
Confidence 99999976543321100 000 0123689999999986 699998875443
No 35
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.69 E-value=1.5e-17 Score=130.25 Aligned_cols=135 Identities=16% Similarity=0.132 Sum_probs=93.2
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccc------------------------cCCCCCCCeeEEE
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDL------------------------SRNVNPSSVDVVT 126 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~------------------------~~~~~~~~fD~ii 126 (231)
.++.+|||||||+|.++..++... +.+++++|+++.++ ..++++++||+|+
T Consensus 60 ~~~~~vLDiGcG~G~~~~~l~~~~-----~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~ 134 (273)
T 3bus_A 60 RSGDRVLDVGCGIGKPAVRLATAR-----DVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFEDASFDAVW 134 (273)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHS-----CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCTTCEEEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHhc-----CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCCCCCccEEE
Confidence 577899999999999998887421 23455555554332 1245678999999
Q ss_pred EeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeEEEeeCHHHHHHHHHHc
Q 045799 127 LIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYFSEDFLSTLFLEA 206 (231)
Q Consensus 127 ~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 206 (231)
+..+++|+ .++..++++++++|||||.+++.++................+...+ ....+++.+++.++++++
T Consensus 135 ~~~~l~~~--~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~l~~a 206 (273)
T 3bus_A 135 ALESLHHM--PDRGRALREMARVLRPGGTVAIADFVLLAPVEGAKKEAVDAFRAGG------GVLSLGGIDEYESDVRQA 206 (273)
T ss_dssp EESCTTTS--SCHHHHHHHHHTTEEEEEEEEEEEEEESSCCCHHHHHHHHHHHHHH------TCCCCCCHHHHHHHHHHT
T ss_pred EechhhhC--CCHHHHHHHHHHHcCCCeEEEEEEeeccCCCChhHHHHHHHHHhhc------CccCCCCHHHHHHHHHHc
Confidence 99999999 7789999999999999999999876543211000000000000000 012357899999999999
Q ss_pred CceEEEEEEEee
Q 045799 207 GFSTVDINIHLK 218 (231)
Q Consensus 207 Gf~~~~~~~~~~ 218 (231)
||+++++...+.
T Consensus 207 Gf~~~~~~~~~~ 218 (273)
T 3bus_A 207 ELVVTSTVDISA 218 (273)
T ss_dssp TCEEEEEEECHH
T ss_pred CCeEEEEEECcH
Confidence 999998877543
No 36
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.69 E-value=4.8e-17 Score=127.96 Aligned_cols=139 Identities=16% Similarity=0.181 Sum_probs=95.8
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc------------------CCCCCCCeeEEEEeeeee
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS------------------RNVNPSSVDVVTLIFMLS 132 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~------------------~~~~~~~fD~ii~~~~l~ 132 (231)
.++.+|||||||+|.++..++.. +.+++++|+++.++. .++ +++||+|++..+++
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~~------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~fD~v~~~~~l~ 128 (279)
T 3ccf_A 56 QPGEFILDLGCGTGQLTEKIAQS------GAEVLGTDNAATMIEKARQNYPHLHFDVADARNFRV-DKPLDAVFSNAMLH 128 (279)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT------TCEEEEEESCHHHHHHHHHHCTTSCEEECCTTTCCC-SSCEEEEEEESCGG
T ss_pred CCCCEEEEecCCCCHHHHHHHhC------CCeEEEEECCHHHHHHHHhhCCCCEEEECChhhCCc-CCCcCEEEEcchhh
Confidence 56789999999999999988752 346677777655432 122 47899999999999
Q ss_pred ccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhh--hhccccccccceEEeCCCeEEEeeCHHHHHHHHHHcCceE
Q 045799 133 AVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVK--LLDRNQMIGDSFYVRGDGTCSFYFSEDFLSTLFLEAGFST 210 (231)
Q Consensus 133 ~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~ 210 (231)
|+ .++..++++++++|||||.+++..+......... +.......... .........+++.+++.++|+++||++
T Consensus 129 ~~--~d~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~aGf~~ 204 (279)
T 3ccf_A 129 WV--KEPEAAIASIHQALKSGGRFVAEFGGKGNIKYILEALYNALETLGIH--NPQALNPWYFPSIGEYVNILEKQGFDV 204 (279)
T ss_dssp GC--SCHHHHHHHHHHHEEEEEEEEEEEECTTTTHHHHHHHHHHHHHHTCC--CGGGGCCCCCCCHHHHHHHHHHHTEEE
T ss_pred hC--cCHHHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHHHHHHhcCCc--cccCcCceeCCCHHHHHHHHHHcCCEE
Confidence 99 7899999999999999999999876554321110 00000000000 000011123578999999999999999
Q ss_pred EEEEEEeeee
Q 045799 211 VDINIHLKQI 220 (231)
Q Consensus 211 ~~~~~~~~~~ 220 (231)
+.+.......
T Consensus 205 ~~~~~~~~~~ 214 (279)
T 3ccf_A 205 TYAALFNRPT 214 (279)
T ss_dssp EEEEEEECCE
T ss_pred EEEEEecccc
Confidence 9887765544
No 37
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.69 E-value=7.5e-17 Score=122.89 Aligned_cols=136 Identities=17% Similarity=0.226 Sum_probs=97.1
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc------------------CCCCCCCeeEEEEeeeee
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS------------------RNVNPSSVDVVTLIFMLS 132 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~------------------~~~~~~~fD~ii~~~~l~ 132 (231)
.++.+|||+|||+|.++..++.. +.+++++|+++.++. .++++++||+|++..+++
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~------~~~~~~~D~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~~~l~ 104 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKEN------GTRVSGIEAFPEAAEQAKEKLDHVVLGDIETMDMPYEEEQFDCVIFGDVLE 104 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTT------TCEEEEEESSHHHHHHHHTTSSEEEESCTTTCCCCSCTTCEEEEEEESCGG
T ss_pred cCCCcEEEeCCCCCHHHHHHHhc------CCeEEEEeCCHHHHHHHHHhCCcEEEcchhhcCCCCCCCccCEEEECChhh
Confidence 46789999999999999988754 135666776554321 245668999999999999
Q ss_pred ccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEe----CCCeEEEeeCHHHHHHHHHHcCc
Q 045799 133 AVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVR----GDGTCSFYFSEDFLSTLFLEAGF 208 (231)
Q Consensus 133 ~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~l~~~Gf 208 (231)
|+ .++..+++++.++|+|||.+++..+........... ....+... ....+..+++.+++.++++++||
T Consensus 105 ~~--~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf 177 (230)
T 3cc8_A 105 HL--FDPWAVIEKVKPYIKQNGVILASIPNVSHISVLAPL-----LAGNWTYTEYGLLDKTHIRFFTFNEMLRMFLKAGY 177 (230)
T ss_dssp GS--SCHHHHHHHTGGGEEEEEEEEEEEECTTSHHHHHHH-----HTTCCCCBSSSTTBTTCCCCCCHHHHHHHHHHTTE
T ss_pred hc--CCHHHHHHHHHHHcCCCCEEEEEeCCcchHHHHHHH-----hcCCceeccCCCCCcceEEEecHHHHHHHHHHcCC
Confidence 99 778999999999999999999987665433211000 00011000 01122346899999999999999
Q ss_pred eEEEEEEEeee
Q 045799 209 STVDINIHLKQ 219 (231)
Q Consensus 209 ~~~~~~~~~~~ 219 (231)
+++++......
T Consensus 178 ~~~~~~~~~~~ 188 (230)
T 3cc8_A 178 SISKVDRVYVD 188 (230)
T ss_dssp EEEEEEEEECC
T ss_pred eEEEEEecccC
Confidence 99998876554
No 38
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.69 E-value=5.6e-17 Score=126.26 Aligned_cols=137 Identities=18% Similarity=0.181 Sum_probs=92.7
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc----------------------CCCCCCCeeEEEEe
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS----------------------RNVNPSSVDVVTLI 128 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~----------------------~~~~~~~fD~ii~~ 128 (231)
.++.+|||||||+|.++..++.. +.+++++|+++.++. .++++++||+|++.
T Consensus 38 ~~~~~vLDiG~G~G~~~~~l~~~------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~ 111 (263)
T 2yqz_A 38 GEEPVFLELGVGTGRIALPLIAR------GYRYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIPLPDESVHGVIVV 111 (263)
T ss_dssp SSCCEEEEETCTTSTTHHHHHTT------TCEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCCSCTTCEEEEEEE
T ss_pred CCCCEEEEeCCcCCHHHHHHHHC------CCEEEEEECCHHHHHHHHHHhhccCCceEEEEcccccCCCCCCCeeEEEEC
Confidence 56789999999999999988844 224556665543321 14567899999999
Q ss_pred eeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhh-----hhhhccccccccceEEeCCCeEEEeeCHHHHHHHH
Q 045799 129 FMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQ-----VKLLDRNQMIGDSFYVRGDGTCSFYFSEDFLSTLF 203 (231)
Q Consensus 129 ~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 203 (231)
.+++|+ ++...+++++.++|+|||.+++. +...+... ..+......... .......+++.+++.++|
T Consensus 112 ~~l~~~--~~~~~~l~~~~~~L~pgG~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l 183 (263)
T 2yqz_A 112 HLWHLV--PDWPKVLAEAIRVLKPGGALLEG-WDQAEASPEWTLQERWRAFAAEEGF-----PVERGLHAKRLKEVEEAL 183 (263)
T ss_dssp SCGGGC--TTHHHHHHHHHHHEEEEEEEEEE-EEEECCCHHHHHHHHHHHHHHHHTC-----CCCCCHHHHHHHHHHHHH
T ss_pred Cchhhc--CCHHHHHHHHHHHCCCCcEEEEE-ecCCCccHHHHHHHHHHHHHHHhCC-----CcccccccCCHHHHHHHH
Confidence 999999 68999999999999999999887 33221000 000000000000 001112357889999999
Q ss_pred HHcCceEEEEEEEeeeee
Q 045799 204 LEAGFSTVDINIHLKQIK 221 (231)
Q Consensus 204 ~~~Gf~~~~~~~~~~~~~ 221 (231)
+++||+++.+....+...
T Consensus 184 ~~~Gf~~~~~~~~~~~~~ 201 (263)
T 2yqz_A 184 RRLGLKPRTREVARWREE 201 (263)
T ss_dssp HHTTCCCEEEEEEEEEEE
T ss_pred HHcCCCcceEEEeeeecC
Confidence 999999888776665443
No 39
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.69 E-value=8.1e-17 Score=127.45 Aligned_cols=121 Identities=16% Similarity=0.252 Sum_probs=85.7
Q ss_pred HHhhHHHhhHHHHHHhccCCcccchhhhHHhhcccccCCCCCCCCCCCeEEEEcCCCCcchHHHhcCccccccceeeeee
Q 045799 27 HYQSKAKKYWDGFYKRHKNKFFKDRHYLEKDWGNYFSDDSCCPNGNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVC 106 (231)
Q Consensus 27 ~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~ 106 (231)
.++....++|+.++........ .+...+...+. ..++.+|||||||+|.++..++.. +.+++++
T Consensus 22 y~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~l~------~~~~~~vLDiGcG~G~~~~~l~~~------~~~v~gv 85 (293)
T 3thr_A 22 YADGEAARVWQLYIGDTRSRTA----EYKAWLLGLLR------QHGCHRVLDVACGTGVDSIMLVEE------GFSVTSV 85 (293)
T ss_dssp TTTCHHHHHHHHHHTCCSCBCH----HHHHHHHHHHH------HTTCCEEEETTCTTSHHHHHHHHT------TCEEEEE
T ss_pred hcCchHHHHHHHHHhcCcchHH----HHHHHHHHHhc------ccCCCEEEEecCCCCHHHHHHHHC------CCeEEEE
Confidence 3455577889988744433322 22233322332 145689999999999999998854 3367788
Q ss_pred cCCcccccC---------------------------C---CCCCCeeEEEEe-eeeeccCC-----CCHHHHHHHHHHhc
Q 045799 107 NVVNDDLSR---------------------------N---VNPSSVDVVTLI-FMLSAVSP-----KKMPLILQNIKAVL 150 (231)
Q Consensus 107 D~~~~~~~~---------------------------~---~~~~~fD~ii~~-~~l~~~~~-----~~~~~~l~~~~~~L 150 (231)
|+++.++.. + +++++||+|++. ++++|++. ++...++++++++|
T Consensus 86 D~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~L 165 (293)
T 3thr_A 86 DASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMV 165 (293)
T ss_dssp ESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTE
T ss_pred ECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHc
Confidence 887655421 1 467899999998 89999943 33999999999999
Q ss_pred CCCeEEEEEeccC
Q 045799 151 KPDGYILVCDYAI 163 (231)
Q Consensus 151 k~gG~l~i~~~~~ 163 (231)
||||++++...+.
T Consensus 166 kpgG~l~~~~~~~ 178 (293)
T 3thr_A 166 RPGGLLVIDHRNY 178 (293)
T ss_dssp EEEEEEEEEEECH
T ss_pred CCCeEEEEEeCCH
Confidence 9999999876543
No 40
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.69 E-value=3e-17 Score=122.95 Aligned_cols=126 Identities=13% Similarity=0.128 Sum_probs=90.3
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc----------------------CCCCCCCeeEEEEe
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS----------------------RNVNPSSVDVVTLI 128 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~----------------------~~~~~~~fD~ii~~ 128 (231)
.++ +|||||||+|.++..++.. +.+++++|+++.++. .++++++||+|++.
T Consensus 29 ~~~-~vLdiGcG~G~~~~~l~~~------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~ 101 (202)
T 2kw5_A 29 PQG-KILCLAEGEGRNACFLASL------GYEVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFDIVADAWEGIVSI 101 (202)
T ss_dssp CSS-EEEECCCSCTHHHHHHHTT------TCEEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBSCCTTTCSEEEEE
T ss_pred CCC-CEEEECCCCCHhHHHHHhC------CCeEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcCCCcCCccEEEEE
Confidence 445 9999999999999888744 235566666543321 13456899999995
Q ss_pred eeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeEEEeeCHHHHHHHHHHcCc
Q 045799 129 FMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYFSEDFLSTLFLEAGF 208 (231)
Q Consensus 129 ~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf 208 (231)
. .|++.++...+++++.++|+|||.+++.++....... . .. .......+++.+++.++|+ ||
T Consensus 102 ~--~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~---~-~~----------~~~~~~~~~~~~~l~~~l~--Gf 163 (202)
T 2kw5_A 102 F--CHLPSSLRQQLYPKVYQGLKPGGVFILEGFAPEQLQY---N-TG----------GPKDLDLLPKLETLQSELP--SL 163 (202)
T ss_dssp C--CCCCHHHHHHHHHHHHTTCCSSEEEEEEEECTTTGGG---T-SC----------CSSSGGGCCCHHHHHHHCS--SS
T ss_pred h--hcCCHHHHHHHHHHHHHhcCCCcEEEEEEeccccccC---C-CC----------CCCcceeecCHHHHHHHhc--Cc
Confidence 3 4555467899999999999999999998876654321 0 00 0001123689999999998 99
Q ss_pred eEEEEEEEeeeee
Q 045799 209 STVDINIHLKQIK 221 (231)
Q Consensus 209 ~~~~~~~~~~~~~ 221 (231)
+++.+......+.
T Consensus 164 ~v~~~~~~~~~~~ 176 (202)
T 2kw5_A 164 NWLIANNLERNLD 176 (202)
T ss_dssp CEEEEEEEEEECS
T ss_pred eEEEEEEEEeecC
Confidence 9999988777653
No 41
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.68 E-value=2.6e-17 Score=130.42 Aligned_cols=142 Identities=15% Similarity=0.264 Sum_probs=92.7
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc------------------------CCC-CCCCeeEE
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS------------------------RNV-NPSSVDVV 125 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~------------------------~~~-~~~~fD~i 125 (231)
.++.+|||||||+|.++..++... ..+++++|+++.++. .++ ++++||+|
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~-----~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v 137 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERAG-----IGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVI 137 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHHT-----CSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHHCC-----CCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEE
Confidence 667899999999999998876321 113445554433221 133 46799999
Q ss_pred EEeeeeec--cCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhh-------------hhc--cccc-cccce--EE-
Q 045799 126 TLIFMLSA--VSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVK-------------LLD--RNQM-IGDSF--YV- 184 (231)
Q Consensus 126 i~~~~l~~--~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~-------------~~~--~~~~-~~~~~--~~- 184 (231)
++..++|| ...+++..+++++.++|+|||.+++..+......... +.. .... ....+ +.
T Consensus 138 ~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~ 217 (298)
T 1ri5_A 138 SSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPSRDVILERYKQGRMSNDFYKIELEKMEDVPMESVREYRFTLL 217 (298)
T ss_dssp EEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEECHHHHHHHHHHTCCBCSSEEEECCCCSSCCTTTCCEEEEEET
T ss_pred EECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHccCccCCeeEEEEeCccccccccccceEEEEEc
Confidence 99999988 3346788999999999999999999875543221100 000 0000 00111 11
Q ss_pred -eCCCeEEEeeCHHHHHHHHHHcCceEEEEEEEe
Q 045799 185 -RGDGTCSFYFSEDFLSTLFLEAGFSTVDINIHL 217 (231)
Q Consensus 185 -~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~~~~ 217 (231)
........+++.+++.++|+++||+++++....
T Consensus 218 ~~~~~~~~~~~~~~~l~~ll~~aGf~~v~~~~~~ 251 (298)
T 1ri5_A 218 DSVNNCIEYFVDFTRMVDGFKRLGLSLVERKGFI 251 (298)
T ss_dssp TSCSSEEEECCCHHHHHHHHHTTTEEEEEEEEHH
T ss_pred hhhcCCcccccCHHHHHHHHHHcCCEEEEecCHH
Confidence 112334567899999999999999999987654
No 42
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.68 E-value=1.7e-16 Score=122.23 Aligned_cols=139 Identities=17% Similarity=0.204 Sum_probs=91.3
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc----------------------CCCCCCCeeEEEEe
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS----------------------RNVNPSSVDVVTLI 128 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~----------------------~~~~~~~fD~ii~~ 128 (231)
.++.+|||+|||+|.++..++.. +.+++++|+++.++. .+++ ++||+|++.
T Consensus 36 ~~~~~vLdiG~G~G~~~~~l~~~------~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~ 108 (246)
T 1y8c_A 36 LVFDDYLDLACGTGNLTENLCPK------FKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLNIN-RKFDLITCC 108 (246)
T ss_dssp CCTTEEEEETCTTSTTHHHHGGG------SSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCCCS-CCEEEEEEC
T ss_pred CCCCeEEEeCCCCCHHHHHHHHC------CCcEEEEECCHHHHHHHHHHHhhcCCCeEEEecccccCCcc-CCceEEEEc
Confidence 46789999999999999988743 234566666544321 1233 789999999
Q ss_pred e-eeeccC-CCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhh----hhc-------cccc------cc--cceEEeC-
Q 045799 129 F-MLSAVS-PKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVK----LLD-------RNQM------IG--DSFYVRG- 186 (231)
Q Consensus 129 ~-~l~~~~-~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~----~~~-------~~~~------~~--~~~~~~~- 186 (231)
. +++|++ ++++..++++++++|+|||.+++............ +.. .... .. ..++...
T Consensus 109 ~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (246)
T 1y8c_A 109 LDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFDINSYYKLSQVLGNNDFNYDDDEVFYYWENQFEDDLVSMYISFFVRDG 188 (246)
T ss_dssp TTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEEEECHHHHHTTTTTCCEEEEETTEEEEEEEEEETTEEEEEEEEEEECS
T ss_pred CccccccCCHHHHHHHHHHHHHhcCCCcEEEEEecCHHHHHhhcCcceEEecCCcEEEEEecccCCceEEEEEEEEEecC
Confidence 8 999994 35788999999999999999998654432211000 000 0000 00 0000001
Q ss_pred -------CCeEEEeeCHHHHHHHHHHcCceEEEEEEE
Q 045799 187 -------DGTCSFYFSEDFLSTLFLEAGFSTVDINIH 216 (231)
Q Consensus 187 -------~~~~~~~~~~~~l~~~l~~~Gf~~~~~~~~ 216 (231)
...+..+++.+++.++|+++||+++++...
T Consensus 189 ~~~~~~~~~~~~~~~~~~~l~~ll~~aGf~~~~~~~~ 225 (246)
T 1y8c_A 189 EFYKRFDEEHEERAYKEEDIEKYLKHGQLNILDKVDC 225 (246)
T ss_dssp SSEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEEEES
T ss_pred CcccccEEEEEEEcCCHHHHHHHHHHCCCeEEEEEcc
Confidence 112245789999999999999999988543
No 43
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.67 E-value=3.8e-17 Score=126.03 Aligned_cols=141 Identities=14% Similarity=0.166 Sum_probs=92.6
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC------------------------CCC-CCCeeEE
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR------------------------NVN-PSSVDVV 125 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~------------------------~~~-~~~fD~i 125 (231)
.++.+|||||||+|.++..++... .+++++|+++.++.. ++. ...||+|
T Consensus 55 ~~~~~vLD~GcG~G~~~~~la~~~------~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v 128 (245)
T 3ggd_A 55 NPELPLIDFACGNGTQTKFLSQFF------PRVIGLDVSKSALEIAAKENTAANISYRLLDGLVPEQAAQIHSEIGDANI 128 (245)
T ss_dssp CTTSCEEEETCTTSHHHHHHHHHS------SCEEEEESCHHHHHHHHHHSCCTTEEEEECCTTCHHHHHHHHHHHCSCEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHHhC------CCEEEEECCHHHHHHHHHhCcccCceEEECcccccccccccccccCccEE
Confidence 677899999999999999987331 145566666544321 010 1248999
Q ss_pred EEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccc-cccccce-EEeCCCeEEEeeCHHHHHHHH
Q 045799 126 TLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRN-QMIGDSF-YVRGDGTCSFYFSEDFLSTLF 203 (231)
Q Consensus 126 i~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~l~~~l 203 (231)
++..+++|+++++...++++++++|||||++++.++...+.......... ....... .....+.....++.+++.++|
T Consensus 129 ~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (245)
T 3ggd_A 129 YMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIELGTGCIDFFNSLLEKYGQLPYELLLVMEHGIRPGIFTAEDIELYF 208 (245)
T ss_dssp EEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEECTTHHHHHHHHHHHHSSCCHHHHHHHTTTCCCCCCCHHHHHHHC
T ss_pred EEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCCccccHHHHHHHhCCCCCchhhhhccccCCCCCccCHHHHHHHh
Confidence 99999999976689999999999999999999998776543211100000 0000000 000111122347899999999
Q ss_pred HHcCceEEEEEEEeee
Q 045799 204 LEAGFSTVDINIHLKQ 219 (231)
Q Consensus 204 ~~~Gf~~~~~~~~~~~ 219 (231)
+||++++.......
T Consensus 209 --aGf~~~~~~~~~~~ 222 (245)
T 3ggd_A 209 --PDFEILSQGEGLFQ 222 (245)
T ss_dssp --TTEEEEEEECCBCC
T ss_pred --CCCEEEeccccccc
Confidence 99999997766543
No 44
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.67 E-value=1.5e-16 Score=115.83 Aligned_cols=119 Identities=18% Similarity=0.272 Sum_probs=91.9
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc---------------CCCCCCCeeEEEEeeeeeccC
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS---------------RNVNPSSVDVVTLIFMLSAVS 135 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~---------------~~~~~~~fD~ii~~~~l~~~~ 135 (231)
.++.+|||+|||+|.++..++... .+++++|+++.++. .++++++||+|++..+++|+
T Consensus 16 ~~~~~vLDiG~G~G~~~~~l~~~~------~~v~~vD~s~~~~~~a~~~~~~v~~~~~d~~~~~~~~D~v~~~~~l~~~- 88 (170)
T 3i9f_A 16 GKKGVIVDYGCGNGFYCKYLLEFA------TKLYCIDINVIALKEVKEKFDSVITLSDPKEIPDNSVDFILFANSFHDM- 88 (170)
T ss_dssp SCCEEEEEETCTTCTTHHHHHTTE------EEEEEECSCHHHHHHHHHHCTTSEEESSGGGSCTTCEEEEEEESCSTTC-
T ss_pred CCCCeEEEECCCCCHHHHHHHhhc------CeEEEEeCCHHHHHHHHHhCCCcEEEeCCCCCCCCceEEEEEccchhcc-
Confidence 567899999999999999988542 25667777654421 24567899999999999999
Q ss_pred CCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeEEEeeCHHHHHHHHHHcCceEEEEEE
Q 045799 136 PKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYFSEDFLSTLFLEAGFSTVDINI 215 (231)
Q Consensus 136 ~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~~ 215 (231)
+++..+++++.++|+|||.+++.++........ .. ....++.+++.++++ ||++++...
T Consensus 89 -~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~------~~------------~~~~~~~~~~~~~l~--Gf~~~~~~~ 147 (170)
T 3i9f_A 89 -DDKQHVISEVKRILKDDGRVIIIDWRKENTGIG------PP------------LSIRMDEKDYMGWFS--NFVVEKRFN 147 (170)
T ss_dssp -SCHHHHHHHHHHHEEEEEEEEEEEECSSCCSSS------SC------------GGGCCCHHHHHHHTT--TEEEEEEEC
T ss_pred -cCHHHHHHHHHHhcCCCCEEEEEEcCccccccC------ch------------HhhhcCHHHHHHHHh--CcEEEEccC
Confidence 789999999999999999999987665432210 00 012378999999998 999998866
Q ss_pred Ee
Q 045799 216 HL 217 (231)
Q Consensus 216 ~~ 217 (231)
..
T Consensus 148 ~~ 149 (170)
T 3i9f_A 148 PT 149 (170)
T ss_dssp SS
T ss_pred CC
Confidence 54
No 45
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.67 E-value=1.7e-16 Score=119.33 Aligned_cols=139 Identities=17% Similarity=0.203 Sum_probs=95.9
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc----------------------CCCCCCCeeEEEEe
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS----------------------RNVNPSSVDVVTLI 128 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~----------------------~~~~~~~fD~ii~~ 128 (231)
.++.+|||+|||+|..+..++... +.+++++|+++.++. .++++++||+|++.
T Consensus 22 ~~~~~vLDiGcG~G~~~~~~~~~~-----~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~ 96 (209)
T 2p8j_A 22 NLDKTVLDCGAGGDLPPLSIFVED-----GYKTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLPFKDESMSFVYSY 96 (209)
T ss_dssp SSCSEEEEESCCSSSCTHHHHHHT-----TCEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCCSCTTCEEEEEEC
T ss_pred CCCCEEEEECCCCCHHHHHHHHhC-----CCEEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCCCCCCceeEEEEc
Confidence 567899999999999855444211 234556666543321 14567899999999
Q ss_pred eeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEE---eCCCeEEEeeCHHHHHHHHHH
Q 045799 129 FMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYV---RGDGTCSFYFSEDFLSTLFLE 205 (231)
Q Consensus 129 ~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~ 205 (231)
.+++|++++++..++++++++|+|||.+++.++...+.... ....+....+. ........+++.+++.+++.+
T Consensus 97 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 172 (209)
T 2p8j_A 97 GTIFHMRKNDVKEAIDEIKRVLKPGGLACINFLTTKDERYN----KGEKIGEGEFLQLERGEKVIHSYVSLEEADKYFKD 172 (209)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEETTSTTTT----CSEEEETTEEEECC-CCCEEEEEECHHHHHHTTTT
T ss_pred ChHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEecccchhcc----chhhhccccceeccCCCceeEEecCHHHHHHHHhh
Confidence 99999976788999999999999999999998776543211 01112222221 122334568999999999999
Q ss_pred cCceEEEEEEEee
Q 045799 206 AGFSTVDINIHLK 218 (231)
Q Consensus 206 ~Gf~~~~~~~~~~ 218 (231)
+||...+.....+
T Consensus 173 ~g~~~~~~~~~~~ 185 (209)
T 2p8j_A 173 MKVLFKEDRVVER 185 (209)
T ss_dssp SEEEEEEEEEEEE
T ss_pred cCceeeeeeeeeh
Confidence 9998877655443
No 46
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.67 E-value=1.3e-16 Score=132.46 Aligned_cols=128 Identities=20% Similarity=0.322 Sum_probs=96.8
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC---------------------CCCCCCeeEEEEee
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR---------------------NVNPSSVDVVTLIF 129 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~---------------------~~~~~~fD~ii~~~ 129 (231)
.++.+|||||||+|.++..++.. +.+++++|++..++.. ++++++||+|++.+
T Consensus 106 ~~~~~VLDiGcG~G~~~~~l~~~------g~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~fD~I~~~~ 179 (416)
T 4e2x_A 106 GPDPFIVEIGCNDGIMLRTIQEA------GVRHLGFEPSSGVAAKAREKGIRVRTDFFEKATADDVRRTEGPANVIYAAN 179 (416)
T ss_dssp SSSCEEEEETCTTTTTHHHHHHT------TCEEEEECCCHHHHHHHHTTTCCEECSCCSHHHHHHHHHHHCCEEEEEEES
T ss_pred CCCCEEEEecCCCCHHHHHHHHc------CCcEEEECCCHHHHHHHHHcCCCcceeeechhhHhhcccCCCCEEEEEECC
Confidence 56789999999999999988754 4478899998765421 22358999999999
Q ss_pred eeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeEEEeeCHHHHHHHHHHcCce
Q 045799 130 MLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYFSEDFLSTLFLEAGFS 209 (231)
Q Consensus 130 ~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~ 209 (231)
+++|+ +++..++++++++|||||++++........... . .+...+ ..+..+++.+++.++++++||+
T Consensus 180 vl~h~--~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~--~----~~~~~~-----~~~~~~~s~~~l~~ll~~aGf~ 246 (416)
T 4e2x_A 180 TLCHI--PYVQSVLEGVDALLAPDGVFVFEDPYLGDIVAK--T----SFDQIF-----DEHFFLFSATSVQGMAQRCGFE 246 (416)
T ss_dssp CGGGC--TTHHHHHHHHHHHEEEEEEEEEEEECHHHHHHH--T----CGGGCS-----TTCCEECCHHHHHHHHHHTTEE
T ss_pred hHHhc--CCHHHHHHHHHHHcCCCeEEEEEeCChHHhhhh--c----chhhhh-----hhhhhcCCHHHHHHHHHHcCCE
Confidence 99999 789999999999999999999976543322110 0 000000 1123468999999999999999
Q ss_pred EEEEEEEe
Q 045799 210 TVDINIHL 217 (231)
Q Consensus 210 ~~~~~~~~ 217 (231)
++++...+
T Consensus 247 ~~~~~~~~ 254 (416)
T 4e2x_A 247 LVDVQRLP 254 (416)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEcc
Confidence 99988754
No 47
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.67 E-value=3e-16 Score=122.55 Aligned_cols=128 Identities=15% Similarity=0.160 Sum_probs=91.1
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc------------------------CCCCCCCeeEEE
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS------------------------RNVNPSSVDVVT 126 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~------------------------~~~~~~~fD~ii 126 (231)
.++.+|||||||+|.++..++... ..+++++|+++.++. .++++++||+|+
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~-----~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~ 119 (267)
T 3kkz_A 45 TEKSLIADIGCGTGGQTMVLAGHV-----TGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRNEELDLIW 119 (267)
T ss_dssp CTTCEEEEETCTTCHHHHHHHTTC-----SSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHhcc-----CCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCCCCEEEEE
Confidence 678999999999999999988541 235566666554321 144678999999
Q ss_pred EeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhh-hhhhccccccccceEEeCCCeEEEeeCHHHHHHHHHH
Q 045799 127 LIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQ-VKLLDRNQMIGDSFYVRGDGTCSFYFSEDFLSTLFLE 205 (231)
Q Consensus 127 ~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 205 (231)
+..+++|+ ++..+++++.++|||||.+++.+........ ..... .+... ...+.+..++.+++++
T Consensus 120 ~~~~~~~~---~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~---~~~~~--------~~~~~~~~~~~~~l~~ 185 (267)
T 3kkz_A 120 SEGAIYNI---GFERGLNEWRKYLKKGGYLAVSECSWFTDERPAEIND---FWMDA--------YPEIDTIPNQVAKIHK 185 (267)
T ss_dssp ESSCGGGT---CHHHHHHHHGGGEEEEEEEEEEEEEESSSCCCHHHHH---HHHHH--------CTTCEEHHHHHHHHHH
T ss_pred EcCCceec---CHHHHHHHHHHHcCCCCEEEEEEeeecCCCChHHHHH---HHHHh--------CCCCCCHHHHHHHHHH
Confidence 99999999 4789999999999999999998764321110 00000 00000 0124688999999999
Q ss_pred cCceEEEEEEEe
Q 045799 206 AGFSTVDINIHL 217 (231)
Q Consensus 206 ~Gf~~~~~~~~~ 217 (231)
+||+++++...+
T Consensus 186 aGf~~v~~~~~~ 197 (267)
T 3kkz_A 186 AGYLPVATFILP 197 (267)
T ss_dssp TTEEEEEEEECC
T ss_pred CCCEEEEEEECC
Confidence 999999886654
No 48
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.67 E-value=2.5e-16 Score=124.28 Aligned_cols=137 Identities=16% Similarity=0.195 Sum_probs=94.3
Q ss_pred CCCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC----------------------CCCCCCeeEEEE
Q 045799 70 NGNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR----------------------NVNPSSVDVVTL 127 (231)
Q Consensus 70 ~~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~----------------------~~~~~~fD~ii~ 127 (231)
..++.+|||||||+|.++..++... +.+++++|+++.++.. .++ ++||+|++
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~-----~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~fD~v~~ 135 (287)
T 1kpg_A 62 LQPGMTLLDVGCGWGATMMRAVEKY-----DVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD-EPVDRIVS 135 (287)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHH-----CCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC-CCCSEEEE
T ss_pred CCCcCEEEEECCcccHHHHHHHHHc-----CCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC-CCeeEEEE
Confidence 4677899999999999998887321 2255666665443210 223 78999999
Q ss_pred eeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhh---------ccccccccceEEeCCCeEEEeeCHHH
Q 045799 128 IFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLL---------DRNQMIGDSFYVRGDGTCSFYFSEDF 198 (231)
Q Consensus 128 ~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (231)
..+++|++++++..+++++.++|||||.+++.++........... .....+....+ .+ ..+++.++
T Consensus 136 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~s~~~ 210 (287)
T 1kpg_A 136 IGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTITGLHPKEIHERGLPMSFTFARFLKFIVTEIF---PG--GRLPSIPM 210 (287)
T ss_dssp ESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEEECCHHHHTTTTCSCHHHHHHHHHHHHHHTS---TT--CCCCCHHH
T ss_pred eCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEecCCCccccccccccccccccchhhhHHheeC---CC--CCCCCHHH
Confidence 999999987889999999999999999999988766543221000 00000000000 00 12468999
Q ss_pred HHHHHHHcCceEEEEEEEe
Q 045799 199 LSTLFLEAGFSTVDINIHL 217 (231)
Q Consensus 199 l~~~l~~~Gf~~~~~~~~~ 217 (231)
+.++++++||+++++...+
T Consensus 211 ~~~~l~~aGf~~~~~~~~~ 229 (287)
T 1kpg_A 211 VQECASANGFTVTRVQSLQ 229 (287)
T ss_dssp HHHHHHTTTCEEEEEEECH
T ss_pred HHHHHHhCCcEEEEEEeCc
Confidence 9999999999999987643
No 49
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.65 E-value=3.8e-16 Score=121.29 Aligned_cols=137 Identities=12% Similarity=-0.002 Sum_probs=89.8
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc------------------CCCCCCCeeEEEEeeeee
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS------------------RNVNPSSVDVVTLIFMLS 132 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~------------------~~~~~~~fD~ii~~~~l~ 132 (231)
.++.+|||||||+|.++..++... . ..+++++|+++.++. .+ ++++||+|++..+++
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~~--~--~~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~ 106 (259)
T 2p35_A 32 ERVLNGYDLGCGPGNSTELLTDRY--G--VNVITGIDSDDDMLEKAADRLPNTNFGKADLATWK-PAQKADLLYANAVFQ 106 (259)
T ss_dssp SCCSSEEEETCTTTHHHHHHHHHH--C--TTSEEEEESCHHHHHHHHHHSTTSEEEECCTTTCC-CSSCEEEEEEESCGG
T ss_pred CCCCEEEEecCcCCHHHHHHHHhC--C--CCEEEEEECCHHHHHHHHHhCCCcEEEECChhhcC-ccCCcCEEEEeCchh
Confidence 567899999999999998887431 1 224566666654421 12 467899999999999
Q ss_pred ccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhc---cccccccceEEeCCCeEEEeeCHHHHHHHHHHcCce
Q 045799 133 AVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLD---RNQMIGDSFYVRGDGTCSFYFSEDFLSTLFLEAGFS 209 (231)
Q Consensus 133 ~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~ 209 (231)
|+ +++..++++++++|+|||.+++.++............ ....+..... ........+++.+++.++|+++||+
T Consensus 107 ~~--~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~aGf~ 183 (259)
T 2p35_A 107 WV--PDHLAVLSQLMDQLESGGVLAVQMPDNLQEPTHIAMHETADGGPWKDAFS-GGGLRRKPLPPPSDYFNALSPKSSR 183 (259)
T ss_dssp GS--TTHHHHHHHHGGGEEEEEEEEEEEECCTTSHHHHHHHHHHHHSTTGGGC--------CCCCCHHHHHHHHGGGEEE
T ss_pred hC--CCHHHHHHHHHHhcCCCeEEEEEeCCCCCcHHHHHHHHHhcCcchHHHhc-cccccccCCCCHHHHHHHHHhcCCc
Confidence 99 7899999999999999999999875443211100000 0000100000 0001123468999999999999998
Q ss_pred EEEEEE
Q 045799 210 TVDINI 215 (231)
Q Consensus 210 ~~~~~~ 215 (231)
+.....
T Consensus 184 v~~~~~ 189 (259)
T 2p35_A 184 VDVWHT 189 (259)
T ss_dssp EEEEEE
T ss_pred eEEEEE
Confidence 654443
No 50
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.64 E-value=1.6e-15 Score=117.63 Aligned_cols=128 Identities=13% Similarity=0.129 Sum_probs=88.9
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc------------------------CCCCCCCeeEEE
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS------------------------RNVNPSSVDVVT 126 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~------------------------~~~~~~~fD~ii 126 (231)
.++.+|||||||+|.++..++.... .+++++|+++.++. .++++++||+|+
T Consensus 45 ~~~~~vLDiG~G~G~~~~~l~~~~~-----~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~ 119 (257)
T 3f4k_A 45 TDDAKIADIGCGTGGQTLFLADYVK-----GQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQNEELDLIW 119 (257)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHCC-----SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCTTCEEEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHhCC-----CeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCCCCCEEEEE
Confidence 6678999999999999998874321 14455555443321 145678999999
Q ss_pred EeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhh-hhhhccccccccceEEeCCCeEEEeeCHHHHHHHHHH
Q 045799 127 LIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQ-VKLLDRNQMIGDSFYVRGDGTCSFYFSEDFLSTLFLE 205 (231)
Q Consensus 127 ~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 205 (231)
+..+++|+ ++..+++++.++|+|||++++.+........ ..... .+...+ ..+.+..++.+++++
T Consensus 120 ~~~~l~~~---~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~---~~~~~~--------~~~~~~~~~~~~l~~ 185 (257)
T 3f4k_A 120 SEGAIYNI---GFERGMNEWSKYLKKGGFIAVSEASWFTSERPAEIED---FWMDAY--------PEISVIPTCIDKMER 185 (257)
T ss_dssp EESCSCCC---CHHHHHHHHHTTEEEEEEEEEEEEEESSSCCCHHHHH---HHHHHC--------TTCCBHHHHHHHHHH
T ss_pred ecChHhhc---CHHHHHHHHHHHcCCCcEEEEEEeeccCCCChHHHHH---HHHHhC--------CCCCCHHHHHHHHHH
Confidence 99999998 4889999999999999999998754221110 00000 000000 114688999999999
Q ss_pred cCceEEEEEEEe
Q 045799 206 AGFSTVDINIHL 217 (231)
Q Consensus 206 ~Gf~~~~~~~~~ 217 (231)
+||++++....+
T Consensus 186 aGf~~v~~~~~~ 197 (257)
T 3f4k_A 186 AGYTPTAHFILP 197 (257)
T ss_dssp TTEEEEEEEECC
T ss_pred CCCeEEEEEECC
Confidence 999999976544
No 51
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.64 E-value=2e-15 Score=114.11 Aligned_cols=105 Identities=20% Similarity=0.277 Sum_probs=81.0
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccc--------cCCCCCCCeeEEEEeeeeeccCCCCHHHH
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDL--------SRNVNPSSVDVVTLIFMLSAVSPKKMPLI 142 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~--------~~~~~~~~fD~ii~~~~l~~~~~~~~~~~ 142 (231)
.++.+|||||||+|.++..++ .+++++|++...+ ..++++++||+|++..++| . .++..+
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l~---------~~v~~~D~s~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~-~--~~~~~~ 133 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSIR---------NPVHCFDLASLDPRVTVCDMAQVPLEDESVDVAVFCLSLM-G--TNIRDF 133 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHCC---------SCEEEEESSCSSTTEEESCTTSCSCCTTCEEEEEEESCCC-S--SCHHHH
T ss_pred CCCCeEEEECCcCCHHHHHhh---------ccEEEEeCCCCCceEEEeccccCCCCCCCEeEEEEehhcc-c--cCHHHH
Confidence 566899999999999988774 1344555543211 1245678999999999996 4 688999
Q ss_pred HHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeEEEeeCHHHHHHHHHHcCceEEEEEE
Q 045799 143 LQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYFSEDFLSTLFLEAGFSTVDINI 215 (231)
Q Consensus 143 l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~~ 215 (231)
++++.++|+|||.+++.++... +.+.+++.++++++||+++....
T Consensus 134 l~~~~~~L~~gG~l~i~~~~~~----------------------------~~~~~~~~~~l~~~Gf~~~~~~~ 178 (215)
T 2zfu_A 134 LEEANRVLKPGGLLKVAEVSSR----------------------------FEDVRTFLRAVTKLGFKIVSKDL 178 (215)
T ss_dssp HHHHHHHEEEEEEEEEEECGGG----------------------------CSCHHHHHHHHHHTTEEEEEEEC
T ss_pred HHHHHHhCCCCeEEEEEEcCCC----------------------------CCCHHHHHHHHHHCCCEEEEEec
Confidence 9999999999999999864320 12778999999999999988654
No 52
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.63 E-value=3.7e-16 Score=121.23 Aligned_cols=85 Identities=16% Similarity=0.314 Sum_probs=70.4
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC-----------------CCCCCCeeEEEEeeeeec
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR-----------------NVNPSSVDVVTLIFMLSA 133 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~-----------------~~~~~~fD~ii~~~~l~~ 133 (231)
+.+.+|||||||+|..+..|+.. ..+++++|++..|+.. ++++++||+|++..++||
T Consensus 38 ~~~~~vLDvGcGtG~~~~~l~~~------~~~v~gvD~s~~ml~~a~~~~~v~~~~~~~e~~~~~~~sfD~v~~~~~~h~ 111 (257)
T 4hg2_A 38 PARGDALDCGCGSGQASLGLAEF------FERVHAVDPGEAQIRQALRHPRVTYAVAPAEDTGLPPASVDVAIAAQAMHW 111 (257)
T ss_dssp SCSSEEEEESCTTTTTHHHHHTT------CSEEEEEESCHHHHHTCCCCTTEEEEECCTTCCCCCSSCEEEEEECSCCTT
T ss_pred CCCCCEEEEcCCCCHHHHHHHHh------CCEEEEEeCcHHhhhhhhhcCCceeehhhhhhhcccCCcccEEEEeeehhH
Confidence 45679999999999999999854 2366788888776532 568899999999999988
Q ss_pred cCCCCHHHHHHHHHHhcCCCeEEEEEeccCC
Q 045799 134 VSPKKMPLILQNIKAVLKPDGYILVCDYAIG 164 (231)
Q Consensus 134 ~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~ 164 (231)
+ ++..++++++|+|||||++++..+...
T Consensus 112 ~---~~~~~~~e~~rvLkpgG~l~~~~~~~~ 139 (257)
T 4hg2_A 112 F---DLDRFWAELRRVARPGAVFAAVTYGLT 139 (257)
T ss_dssp C---CHHHHHHHHHHHEEEEEEEEEEEECCC
T ss_pred h---hHHHHHHHHHHHcCCCCEEEEEECCCC
Confidence 8 367899999999999999998876554
No 53
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.63 E-value=4.6e-16 Score=115.98 Aligned_cols=120 Identities=19% Similarity=0.276 Sum_probs=86.5
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc-----------------------CCCCCCCeeEEEE
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS-----------------------RNVNPSSVDVVTL 127 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~-----------------------~~~~~~~fD~ii~ 127 (231)
.++.+|||+|||+|.++..++.. +.+++++|+++.++. .++ +++||+|++
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~-~~~~D~v~~ 103 (199)
T 2xvm_A 31 VKPGKTLDLGCGNGRNSLYLAAN------GYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTF-DRQYDFILS 103 (199)
T ss_dssp SCSCEEEEETCTTSHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCC-CCCEEEEEE
T ss_pred cCCCeEEEEcCCCCHHHHHHHHC------CCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCC-CCCceEEEE
Confidence 45679999999999999988744 224455555443221 133 679999999
Q ss_pred eeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeEEEeeCHHHHHHHHHHcC
Q 045799 128 IFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYFSEDFLSTLFLEAG 207 (231)
Q Consensus 128 ~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~G 207 (231)
..+++|+++++...+++++.++|+|||.+++.+......... . ......++.+++.+++++
T Consensus 104 ~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~---------~--------~~~~~~~~~~~l~~~~~~-- 164 (199)
T 2xvm_A 104 TVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAAMDTADYPC---------T--------VGFPFAFKEGELRRYYEG-- 164 (199)
T ss_dssp ESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCC---------C--------SCCSCCBCTTHHHHHTTT--
T ss_pred cchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEeeccCCcCC---------C--------CCCCCccCHHHHHHHhcC--
Confidence 999999976689999999999999999988865443221100 0 011235788999999976
Q ss_pred ceEEEEEEE
Q 045799 208 FSTVDINIH 216 (231)
Q Consensus 208 f~~~~~~~~ 216 (231)
|++++....
T Consensus 165 f~~~~~~~~ 173 (199)
T 2xvm_A 165 WERVKYNED 173 (199)
T ss_dssp SEEEEEECC
T ss_pred CeEEEeccc
Confidence 999988654
No 54
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.63 E-value=2.9e-16 Score=121.79 Aligned_cols=127 Identities=13% Similarity=0.165 Sum_probs=88.9
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc------------------------CCCCCCCeeEEE
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS------------------------RNVNPSSVDVVT 126 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~------------------------~~~~~~~fD~ii 126 (231)
.++.+|||||||+|..+..++... +.+++++|+++.++. .++ +++||+|+
T Consensus 35 ~~~~~VLDiGcG~G~~~~~la~~~-----~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~V~ 108 (256)
T 1nkv_A 35 KPGTRILDLGSGSGEMLCTWARDH-----GITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVA-NEKCDVAA 108 (256)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHT-----CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCC-SSCEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhc-----CCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCc-CCCCCEEE
Confidence 677899999999999998887332 124456666543321 123 67899999
Q ss_pred EeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhh-hhhhccccccccceEEeCCCeEEEeeCHHHHHHHHHH
Q 045799 127 LIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQ-VKLLDRNQMIGDSFYVRGDGTCSFYFSEDFLSTLFLE 205 (231)
Q Consensus 127 ~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 205 (231)
+..+++|+ .++..++++++++|||||.+++.+........ ..+.. .+. ......+++..++.++|++
T Consensus 109 ~~~~~~~~--~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~---~~~-------~~~~~~~~~~~~~~~~l~~ 176 (256)
T 1nkv_A 109 CVGATWIA--GGFAGAEELLAQSLKPGGIMLIGEPYWRQLPATEEIAQ---ACG-------VSSTSDFLTLPGLVGAFDD 176 (256)
T ss_dssp EESCGGGT--SSSHHHHHHHTTSEEEEEEEEEEEEEETTCCSSHHHHH---TTT-------CSCGGGSCCHHHHHHHHHT
T ss_pred ECCChHhc--CCHHHHHHHHHHHcCCCeEEEEecCcccCCCChHHHHH---HHh-------cccccccCCHHHHHHHHHH
Confidence 99999999 67899999999999999999998754322110 00000 000 0111235789999999999
Q ss_pred cCceEEEEEE
Q 045799 206 AGFSTVDINI 215 (231)
Q Consensus 206 ~Gf~~~~~~~ 215 (231)
+||+++++..
T Consensus 177 aGf~~~~~~~ 186 (256)
T 1nkv_A 177 LGYDVVEMVL 186 (256)
T ss_dssp TTBCCCEEEE
T ss_pred CCCeeEEEEe
Confidence 9999988654
No 55
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.63 E-value=9.3e-16 Score=121.92 Aligned_cols=138 Identities=15% Similarity=0.191 Sum_probs=95.7
Q ss_pred CCCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC----------------------CCCCCCeeEEEE
Q 045799 70 NGNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR----------------------NVNPSSVDVVTL 127 (231)
Q Consensus 70 ~~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~----------------------~~~~~~fD~ii~ 127 (231)
..++.+|||||||+|.++..++... +.+++++|+++.++.. .+ +++||+|++
T Consensus 70 ~~~~~~vLDiGcG~G~~~~~la~~~-----~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~fD~v~~ 143 (302)
T 3hem_A 70 LEPGMTLLDIGCGWGSTMRHAVAEY-----DVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF-DEPVDRIVS 143 (302)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHH-----CCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC-CCCCSEEEE
T ss_pred CCCcCEEEEeeccCcHHHHHHHHhC-----CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc-CCCccEEEE
Confidence 3678899999999999999887431 1356777776654321 22 689999999
Q ss_pred eeeeeccC-------CCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccc---------cccccceEEeCCCeEE
Q 045799 128 IFMLSAVS-------PKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRN---------QMIGDSFYVRGDGTCS 191 (231)
Q Consensus 128 ~~~l~~~~-------~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~ 191 (231)
..+++|++ .++...+++++.++|||||.+++.++.............. .-+....+ .+ .
T Consensus 144 ~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---p~--~ 218 (302)
T 3hem_A 144 LGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIPDKEEAQELGLTSPMSLLRFIKFILTEIF---PG--G 218 (302)
T ss_dssp ESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHTC---TT--C
T ss_pred cchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEeccCccchhhccccccccccchHHHHHHhcC---CC--C
Confidence 99999994 3456899999999999999999988776644321111000 00000000 00 1
Q ss_pred EeeCHHHHHHHHHHcCceEEEEEEEee
Q 045799 192 FYFSEDFLSTLFLEAGFSTVDINIHLK 218 (231)
Q Consensus 192 ~~~~~~~l~~~l~~~Gf~~~~~~~~~~ 218 (231)
.+.+.+++.++++++||+++++...+.
T Consensus 219 ~~~s~~~~~~~l~~aGf~~~~~~~~~~ 245 (302)
T 3hem_A 219 RLPRISQVDYYSSNAGWKVERYHRIGA 245 (302)
T ss_dssp CCCCHHHHHHHHHHHTCEEEEEEECGG
T ss_pred CCCCHHHHHHHHHhCCcEEEEEEeCch
Confidence 246889999999999999999876543
No 56
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.63 E-value=2.7e-15 Score=119.07 Aligned_cols=142 Identities=13% Similarity=0.191 Sum_probs=92.2
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc------------------------------------
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS------------------------------------ 114 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~------------------------------------ 114 (231)
+++.+|||||||+|..+..++... ..+++++|+++.++.
T Consensus 47 ~~~~~VLDlGCG~G~~l~~~~~~~-----~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l 121 (302)
T 2vdw_A 47 SNKRKVLAIDFGNGADLEKYFYGE-----IALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSV 121 (302)
T ss_dssp CSCCEEEETTCTTTTTHHHHHHTT-----CSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHH
T ss_pred CCCCeEEEEecCCcHhHHHHHhcC-----CCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhh
Confidence 457899999999998777665321 124566666654432
Q ss_pred -CCCCCCCeeEEEEeeeeecc-CCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhh----cccc-ccccc------
Q 045799 115 -RNVNPSSVDVVTLIFMLSAV-SPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLL----DRNQ-MIGDS------ 181 (231)
Q Consensus 115 -~~~~~~~fD~ii~~~~l~~~-~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~----~~~~-~~~~~------ 181 (231)
.++++++||+|+|.+++||+ ..++...++++++++|||||++++.++........... .... ...+.
T Consensus 122 ~~~~~~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 201 (302)
T 2vdw_A 122 REVFYFGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMDGDKLSKLTDKKTFIIHKNLPSSENYMSVEK 201 (302)
T ss_dssp HTTCCSSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEECHHHHTTCCSCEEEECCSSSCTTTSEEEECE
T ss_pred hccccCCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHhcCCcccccccccccceeeecc
Confidence 12356799999999999985 34567899999999999999999887654322211000 0000 00000
Q ss_pred ----e---EE-e--CCCeEEEeeCHHHHHHHHHHcCceEEEEEEEe
Q 045799 182 ----F---YV-R--GDGTCSFYFSEDFLSTLFLEAGFSTVDINIHL 217 (231)
Q Consensus 182 ----~---~~-~--~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~~~~ 217 (231)
. +. . ......++++..++.++++++||++++.....
T Consensus 202 ~~~~~~~~~~~~~~~~~~~e~~v~~~el~~l~~~~Gl~lv~~~~f~ 247 (302)
T 2vdw_A 202 IADDRIVVYNPSTMSTPMTEYIIKKNDIVRVFNEYGFVLVDNVDFA 247 (302)
T ss_dssp EETTEEEEBCTTTBSSCEEEECCCHHHHHHHHHHTTEEEEEEEEHH
T ss_pred ccccccceeeccccCCCceeeeeEHHHHHHHHHHCCCEEEEecChH
Confidence 0 10 0 12223457888999999999999999986544
No 57
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.63 E-value=2.5e-16 Score=118.71 Aligned_cols=118 Identities=20% Similarity=0.147 Sum_probs=82.3
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccce-eeeeecCCccccc------------------CCCCCCCeeEEEEeeee
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERV-NAFVCNVVNDDLS------------------RNVNPSSVDVVTLIFML 131 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~-~~~~~D~~~~~~~------------------~~~~~~~fD~ii~~~~l 131 (231)
.++.+|||+|||+|.++..+ +. +++++|+++.++. .++++++||+|++..++
T Consensus 35 ~~~~~vLdiG~G~G~~~~~l---------~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 105 (211)
T 2gs9_A 35 PPGESLLEVGAGTGYWLRRL---------PYPQKVGVEPSEAMLAVGRRRAPEATWVRAWGEALPFPGESFDVVLLFTTL 105 (211)
T ss_dssp CCCSEEEEETCTTCHHHHHC---------CCSEEEEECCCHHHHHHHHHHCTTSEEECCCTTSCCSCSSCEEEEEEESCT
T ss_pred CCCCeEEEECCCCCHhHHhC---------CCCeEEEEeCCHHHHHHHHHhCCCcEEEEcccccCCCCCCcEEEEEEcChh
Confidence 36789999999999988776 12 4556666543321 24567899999999999
Q ss_pred eccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeEEEeeCHHHHHHHHHHcC
Q 045799 132 SAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYFSEDFLSTLFLEAG 207 (231)
Q Consensus 132 ~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~G 207 (231)
+|+ +++..+++++.++|||||.+++.++.............. .... ....+..+++.+++.++|+ |
T Consensus 106 ~~~--~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~-~~~~-----~~~~~~~~~s~~~l~~~l~--G 171 (211)
T 2gs9_A 106 EFV--EDVERVLLEARRVLRPGGALVVGVLEALSPWAALYRRLG-EKGV-----LPWAQARFLAREDLKALLG--P 171 (211)
T ss_dssp TTC--SCHHHHHHHHHHHEEEEEEEEEEEECTTSHHHHHHHHHH-HTTC-----TTGGGCCCCCHHHHHHHHC--S
T ss_pred hhc--CCHHHHHHHHHHHcCCCCEEEEEecCCcCcHHHHHHHHh-hccC-----ccccccccCCHHHHHHHhc--C
Confidence 999 789999999999999999999988766543211111000 0000 0011234689999999998 7
No 58
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.63 E-value=6.1e-17 Score=121.55 Aligned_cols=122 Identities=9% Similarity=0.069 Sum_probs=84.4
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc-----------------------------------C
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS-----------------------------------R 115 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~-----------------------------------~ 115 (231)
.++.+|||+|||+|..+..|+.. +.+++++|+++.|+. .
T Consensus 21 ~~~~~vLD~GCG~G~~~~~la~~------g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l 94 (203)
T 1pjz_A 21 VPGARVLVPLCGKSQDMSWLSGQ------GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFAL 94 (203)
T ss_dssp CTTCEEEETTTCCSHHHHHHHHH------CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSS
T ss_pred CCCCEEEEeCCCCcHhHHHHHHC------CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccC
Confidence 56789999999999999998732 224455555543321 1
Q ss_pred CCCC-CCeeEEEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeEEEee
Q 045799 116 NVNP-SSVDVVTLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYF 194 (231)
Q Consensus 116 ~~~~-~~fD~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (231)
++.+ ++||+|++..+++|+++++...++++++++|||||++++........ .... ....+
T Consensus 95 ~~~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~----------~~~~---------~~~~~ 155 (203)
T 1pjz_A 95 TARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLITLEYDQA----------LLEG---------PPFSV 155 (203)
T ss_dssp THHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEESSCSS----------SSSS---------CCCCC
T ss_pred CcccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEEecCcc----------ccCC---------CCCCC
Confidence 2222 68999999999999976667789999999999999855443222110 0000 01236
Q ss_pred CHHHHHHHHHHcCceEEEEEEEee
Q 045799 195 SEDFLSTLFLEAGFSTVDINIHLK 218 (231)
Q Consensus 195 ~~~~l~~~l~~~Gf~~~~~~~~~~ 218 (231)
+.+++.+++.+ ||+++.+.....
T Consensus 156 ~~~el~~~~~~-gf~i~~~~~~~~ 178 (203)
T 1pjz_A 156 PQTWLHRVMSG-NWEVTKVGGQDT 178 (203)
T ss_dssp CHHHHHHTSCS-SEEEEEEEESSC
T ss_pred CHHHHHHHhcC-CcEEEEeccccc
Confidence 88999999988 999988766443
No 59
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.63 E-value=6.3e-16 Score=123.50 Aligned_cols=133 Identities=11% Similarity=0.016 Sum_probs=92.9
Q ss_pred CCCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc------------------------CCCCCCCeeEE
Q 045799 70 NGNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS------------------------RNVNPSSVDVV 125 (231)
Q Consensus 70 ~~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~------------------------~~~~~~~fD~i 125 (231)
..++.+|||||||+|.++..++... +.+++++|+++.++. .++++++||+|
T Consensus 115 ~~~~~~vLDiGcG~G~~~~~la~~~-----~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V 189 (312)
T 3vc1_A 115 AGPDDTLVDAGCGRGGSMVMAHRRF-----GSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDKGAVTAS 189 (312)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHH-----CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHHc-----CCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCCCCEeEE
Confidence 3678899999999999999887321 124455555543321 14567899999
Q ss_pred EEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeEEEeeCHHHHHHHHHH
Q 045799 126 TLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYFSEDFLSTLFLE 205 (231)
Q Consensus 126 i~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 205 (231)
++..+++|+ + +..+++++.++|||||.+++.++......... ......+...+. ..+++.+++.++|++
T Consensus 190 ~~~~~l~~~--~-~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~-~~~~~~~~~~~~-------~~~~s~~~~~~~l~~ 258 (312)
T 3vc1_A 190 WNNESTMYV--D-LHDLFSEHSRFLKVGGRYVTITGCWNPRYGQP-SKWVSQINAHFE-------CNIHSRREYLRAMAD 258 (312)
T ss_dssp EEESCGGGS--C-HHHHHHHHHHHEEEEEEEEEEEEEECTTTCSC-CHHHHHHHHHHT-------CCCCBHHHHHHHHHT
T ss_pred EECCchhhC--C-HHHHHHHHHHHcCCCcEEEEEEccccccccch-hHHHHHHHhhhc-------CCCCCHHHHHHHHHH
Confidence 999999999 3 99999999999999999999876554422000 000000000000 125789999999999
Q ss_pred cCceEEEEEEEee
Q 045799 206 AGFSTVDINIHLK 218 (231)
Q Consensus 206 ~Gf~~~~~~~~~~ 218 (231)
+||+++++...+.
T Consensus 259 aGf~~~~~~~~~~ 271 (312)
T 3vc1_A 259 NRLVPHTIVDLTP 271 (312)
T ss_dssp TTEEEEEEEECHH
T ss_pred CCCEEEEEEeCCH
Confidence 9999999887653
No 60
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.63 E-value=4.8e-16 Score=117.22 Aligned_cols=123 Identities=20% Similarity=0.278 Sum_probs=85.4
Q ss_pred HHhhHHHHHHhccC----CcccchhhhHHhhcccccCCCCCCCCCCCeEEEEcCCCCcchHHHhcCccccccceeeeeec
Q 045799 32 AKKYWDGFYKRHKN----KFFKDRHYLEKDWGNYFSDDSCCPNGNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCN 107 (231)
Q Consensus 32 ~~~~w~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D 107 (231)
..+||+.+|..... .++.....+...+...+ .++.+|||+|||+|.++..++.... .+++++|
T Consensus 6 ~~~~W~~~y~~~~~~~~~~~~~~~~~~~~~l~~~~--------~~~~~vLdiGcG~G~~~~~l~~~~~-----~~v~~~D 72 (215)
T 2pxx_A 6 EVEYWDQRYQGAADSAPYDWFGDFSSFRALLEPEL--------RPEDRILVLGCGNSALSYELFLGGF-----PNVTSVD 72 (215)
T ss_dssp CHHHHHHHTTTTTTSCCCCTTCCHHHHHHHHGGGC--------CTTCCEEEETCTTCSHHHHHHHTTC-----CCEEEEE
T ss_pred chhHHHHHhccCCCCCCcccccCHHHHHHHHHHhc--------CCCCeEEEECCCCcHHHHHHHHcCC-----CcEEEEe
Confidence 45799999877652 23333334444444333 6678999999999999998874411 0345555
Q ss_pred CCccccc---------------------CCCCCCCeeEEEEeeeeeccC-------------CCCHHHHHHHHHHhcCCC
Q 045799 108 VVNDDLS---------------------RNVNPSSVDVVTLIFMLSAVS-------------PKKMPLILQNIKAVLKPD 153 (231)
Q Consensus 108 ~~~~~~~---------------------~~~~~~~fD~ii~~~~l~~~~-------------~~~~~~~l~~~~~~Lk~g 153 (231)
+++.++. .++++++||+|++..+++++. .++...+++++.++|+||
T Consensus 73 ~s~~~~~~a~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg 152 (215)
T 2pxx_A 73 YSSVVVAAMQACYAHVPQLRWETMDVRKLDFPSASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPG 152 (215)
T ss_dssp SCHHHHHHHHHHTTTCTTCEEEECCTTSCCSCSSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEE
T ss_pred CCHHHHHHHHHhcccCCCcEEEEcchhcCCCCCCcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCC
Confidence 5433221 145678999999999988773 236689999999999999
Q ss_pred eEEEEEeccCCchh
Q 045799 154 GYILVCDYAIGDFA 167 (231)
Q Consensus 154 G~l~i~~~~~~~~~ 167 (231)
|.+++.++..++..
T Consensus 153 G~li~~~~~~~~~~ 166 (215)
T 2pxx_A 153 GRFISMTSAAPHFR 166 (215)
T ss_dssp EEEEEEESCCHHHH
T ss_pred CEEEEEeCCCcHHH
Confidence 99999987765443
No 61
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.62 E-value=3.8e-16 Score=128.15 Aligned_cols=139 Identities=19% Similarity=0.189 Sum_probs=91.2
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCc-c-------------------------------ccccceeeeeecCCcccc--cCC
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHS-E-------------------------------FREERVNAFVCNVVNDDL--SRN 116 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~-~-------------------------------~~~~~~~~~~~D~~~~~~--~~~ 116 (231)
.++.+|||||||+|.++..++... . +...++.+...|+..... ..+
T Consensus 82 ~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~ 161 (383)
T 4fsd_A 82 LEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEG 161 (383)
T ss_dssp GTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCC
T ss_pred CCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCC
Confidence 577899999999999998887321 0 000234444444432110 015
Q ss_pred CCCCCeeEEEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeEEEeeCH
Q 045799 117 VNPSSVDVVTLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYFSE 196 (231)
Q Consensus 117 ~~~~~fD~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (231)
+++++||+|++..+++|+ .++..++++++++|||||.+++.++................... .....++.
T Consensus 162 ~~~~~fD~V~~~~~l~~~--~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~ 231 (383)
T 4fsd_A 162 VPDSSVDIVISNCVCNLS--TNKLALFKEIHRVLRDGGELYFSDVYADRRLSEAAQQDPILYGE--------CLGGALYL 231 (383)
T ss_dssp CCTTCEEEEEEESCGGGC--SCHHHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHHHCHHHHHT--------TCTTCCBH
T ss_pred CCCCCEEEEEEccchhcC--CCHHHHHHHHHHHcCCCCEEEEEEeccccccCHhHhhhHHHhhc--------ccccCCCH
Confidence 677899999999999999 77999999999999999999998765543211111100000000 00124678
Q ss_pred HHHHHHHHHcCceEEEEEEEeee
Q 045799 197 DFLSTLFLEAGFSTVDINIHLKQ 219 (231)
Q Consensus 197 ~~l~~~l~~~Gf~~~~~~~~~~~ 219 (231)
+++.++|+++||+++++......
T Consensus 232 ~~~~~ll~~aGF~~v~~~~~~~~ 254 (383)
T 4fsd_A 232 EDFRRLVAEAGFRDVRLVSVGPV 254 (383)
T ss_dssp HHHHHHHHHTTCCCEEEEEEEEE
T ss_pred HHHHHHHHHCCCceEEEEecccc
Confidence 99999999999998876654433
No 62
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.61 E-value=1.5e-15 Score=115.03 Aligned_cols=131 Identities=17% Similarity=0.204 Sum_probs=84.3
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc----------------------------CCCCCCCe
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS----------------------------RNVNPSSV 122 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~----------------------------~~~~~~~f 122 (231)
.++.+|||||||+|.++..++.... ..+++++|+++.++. .++++++|
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~----~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~f 103 (219)
T 3jwg_A 28 VNAKKVIDLGCGEGNLLSLLLKDKS----FEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDKRFSGY 103 (219)
T ss_dssp TTCCEEEEETCTTCHHHHHHHTSTT----CCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCGGGTTC
T ss_pred cCCCEEEEecCCCCHHHHHHHhcCC----CCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccccccCCC
Confidence 4568999999999999999884321 124455555543321 12345789
Q ss_pred eEEEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeEEEeeCHHHHH--
Q 045799 123 DVVTLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYFSEDFLS-- 200 (231)
Q Consensus 123 D~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-- 200 (231)
|+|++..+++|+++++...++++++++|||||++++......+... ..+.... .....+...++.+++.
T Consensus 104 D~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~-------~~~~~~~--~~~~~~~~~~~~~~l~~~ 174 (219)
T 3jwg_A 104 DAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTPNKEYNFHY-------GNLFEGN--LRHRDHRFEWTRKEFQTW 174 (219)
T ss_dssp SEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBGGGGGCC-------CCT-------GGGCCTTSBCHHHHHHH
T ss_pred CEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEccchhhhhhh-------cccCccc--ccccCceeeecHHHHHHH
Confidence 9999999999995445689999999999999976655332211110 0000000 0011112347888888
Q ss_pred --HHHHHcCceEEEEE
Q 045799 201 --TLFLEAGFSTVDIN 214 (231)
Q Consensus 201 --~~l~~~Gf~~~~~~ 214 (231)
++++++||++....
T Consensus 175 ~~~l~~~~Gf~v~~~~ 190 (219)
T 3jwg_A 175 AVKVAEKYGYSVRFLQ 190 (219)
T ss_dssp HHHHHHHHTEEEEEEE
T ss_pred HHHHHHHCCcEEEEEe
Confidence 88899999887654
No 63
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.61 E-value=7.5e-16 Score=116.64 Aligned_cols=130 Identities=13% Similarity=0.145 Sum_probs=83.6
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc----------------------------CCCCCCCe
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS----------------------------RNVNPSSV 122 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~----------------------------~~~~~~~f 122 (231)
.++.+|||||||+|.++..++.... ..+++++|+++.++. .+.++++|
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~----~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~f 103 (217)
T 3jwh_A 28 SNARRVIDLGCGQGNLLKILLKDSF----FEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDKRFHGY 103 (217)
T ss_dssp TTCCEEEEETCTTCHHHHHHHHCTT----CSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCGGGCSC
T ss_pred cCCCEEEEeCCCCCHHHHHHHhhCC----CCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccccCCCc
Confidence 4568999999999999999884321 124455555543321 12234789
Q ss_pred eEEEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeEEEeeCHHHHH--
Q 045799 123 DVVTLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYFSEDFLS-- 200 (231)
Q Consensus 123 D~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-- 200 (231)
|+|++..+++|+++++...++++++++|||||++++......+.. + ..+.... .....+...++.+++.
T Consensus 104 D~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~---~----~~~~~~~--~~~~~~~~~~~~~~l~~~ 174 (217)
T 3jwh_A 104 DAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPNIEYNVK---F----ANLPAGK--LRHKDHRFEWTRSQFQNW 174 (217)
T ss_dssp SEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBHHHHHH---T----C-------------CCSCBCHHHHHHH
T ss_pred CEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccCcccchh---h----ccccccc--ccccccccccCHHHHHHH
Confidence 999999999999554568999999999999997776543211110 0 0000000 0011122357888988
Q ss_pred --HHHHHcCceEEEE
Q 045799 201 --TLFLEAGFSTVDI 213 (231)
Q Consensus 201 --~~l~~~Gf~~~~~ 213 (231)
++++++||+++..
T Consensus 175 ~~~~~~~~Gf~v~~~ 189 (217)
T 3jwh_A 175 ANKITERFAYNVQFQ 189 (217)
T ss_dssp HHHHHHHSSEEEEEC
T ss_pred HHHHHHHcCceEEEE
Confidence 8999999998765
No 64
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.60 E-value=1.7e-15 Score=121.28 Aligned_cols=137 Identities=16% Similarity=0.165 Sum_probs=95.1
Q ss_pred CCCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC----------------------CCCCCCeeEEEE
Q 045799 70 NGNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR----------------------NVNPSSVDVVTL 127 (231)
Q Consensus 70 ~~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~----------------------~~~~~~fD~ii~ 127 (231)
..++.+|||||||+|.++..++... +.+++++|+++.++.. .+ +++||+|++
T Consensus 88 ~~~~~~vLDiGcG~G~~~~~la~~~-----~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~fD~v~~ 161 (318)
T 2fk8_A 88 LKPGMTLLDIGCGWGTTMRRAVERF-----DVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDF-AEPVDRIVS 161 (318)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHH-----CCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGC-CCCCSEEEE
T ss_pred CCCcCEEEEEcccchHHHHHHHHHC-----CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHC-CCCcCEEEE
Confidence 3678899999999999998887331 2356677766544321 12 268999999
Q ss_pred eeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhc---------cccccccceEEeCCCeEEEeeCHHH
Q 045799 128 IFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLD---------RNQMIGDSFYVRGDGTCSFYFSEDF 198 (231)
Q Consensus 128 ~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (231)
..+++|++.+++..+++++.++|||||.+++.++............ ....+....+ .+ ..+++.++
T Consensus 162 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~s~~~ 236 (318)
T 2fk8_A 162 IEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSVSYHPYEMAARGKKLSFETARFIKFIVTEIF---PG--GRLPSTEM 236 (318)
T ss_dssp ESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHHTS---TT--CCCCCHHH
T ss_pred eChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEeccCCchhhhhccccccccccchhhHHHHhcC---CC--CcCCCHHH
Confidence 9999999877899999999999999999999887765533210000 0000000000 00 12468999
Q ss_pred HHHHHHHcCceEEEEEEEe
Q 045799 199 LSTLFLEAGFSTVDINIHL 217 (231)
Q Consensus 199 l~~~l~~~Gf~~~~~~~~~ 217 (231)
+.++++++||+++++....
T Consensus 237 ~~~~l~~aGf~~~~~~~~~ 255 (318)
T 2fk8_A 237 MVEHGEKAGFTVPEPLSLR 255 (318)
T ss_dssp HHHHHHHTTCBCCCCEECH
T ss_pred HHHHHHhCCCEEEEEEecc
Confidence 9999999999999876643
No 65
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.60 E-value=2.7e-15 Score=119.47 Aligned_cols=139 Identities=15% Similarity=0.042 Sum_probs=89.7
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc------------------------CCCCCCCeeEEE
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS------------------------RNVNPSSVDVVT 126 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~------------------------~~~~~~~fD~ii 126 (231)
.++.+|||||||+|..+..++... ....+++++|+++.++. .+++ ++||+|+
T Consensus 117 ~~~~~vLDiGcG~G~~~~~la~~~---~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~ 192 (305)
T 3ocj_A 117 RPGCVVASVPCGWMSELLALDYSA---CPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTR-EGYDLLT 192 (305)
T ss_dssp CTTCEEEETTCTTCHHHHTSCCTT---CTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCC-SCEEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhc---CCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCcc-CCeEEEE
Confidence 678899999999999998885211 11335566666544321 1334 8999999
Q ss_pred EeeeeeccCCCCHH---HHHHHHHHhcCCCeEEEEEeccCCchhhhhhhcccccccc-------c-eEEeCCCeEEEeeC
Q 045799 127 LIFMLSAVSPKKMP---LILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGD-------S-FYVRGDGTCSFYFS 195 (231)
Q Consensus 127 ~~~~l~~~~~~~~~---~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~~~~~~~~ 195 (231)
+..+++|++ +.. .++++++++|||||++++.++................... . +..........+++
T Consensus 193 ~~~~~~~~~--~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (305)
T 3ocj_A 193 SNGLNIYEP--DDARVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALRT 270 (305)
T ss_dssp CCSSGGGCC--CHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCC
T ss_pred ECChhhhcC--CHHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhhhccCC
Confidence 999999994 444 4899999999999999998766543221111000000000 0 00000111124579
Q ss_pred HHHHHHHHHHcCceEEEEEE
Q 045799 196 EDFLSTLFLEAGFSTVDINI 215 (231)
Q Consensus 196 ~~~l~~~l~~~Gf~~~~~~~ 215 (231)
.+++.++|+++||+++++..
T Consensus 271 ~~~~~~~l~~aGF~~v~~~~ 290 (305)
T 3ocj_A 271 HAQTRAQLEEAGFTDLRFED 290 (305)
T ss_dssp HHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHCCCEEEEEEc
Confidence 99999999999999998874
No 66
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.59 E-value=7.6e-16 Score=121.43 Aligned_cols=139 Identities=13% Similarity=0.083 Sum_probs=89.3
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc----------------------CCCCCCCeeEEEEe
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS----------------------RNVNPSSVDVVTLI 128 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~----------------------~~~~~~~fD~ii~~ 128 (231)
.++.+|||||||+|.++..++.... .+.+++++|+++.++. .++ +++||+|++.
T Consensus 21 ~~~~~vLDiGcG~G~~~~~l~~~~~---~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~v~~~ 96 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGYLGLVLMPLLP---EGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIEL-NDKYDIAICH 96 (284)
T ss_dssp CSCCEEEEETCTTTHHHHHHTTTSC---TTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTCCC-SSCEEEEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCC---CCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhcCc-CCCeeEEEEC
Confidence 6778999999999999998874321 1245677777655431 123 4689999999
Q ss_pred eeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhh--------hhhhccccccccceEEeCCCeEEEeeCHHHHH
Q 045799 129 FMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQ--------VKLLDRNQMIGDSFYVRGDGTCSFYFSEDFLS 200 (231)
Q Consensus 129 ~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 200 (231)
.+++|+ .++..++++++++|||||.+++.++....... .........+...+..........+.+..++.
T Consensus 97 ~~l~~~--~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 174 (284)
T 3gu3_A 97 AFLLHM--TTPETMLQKMIHSVKKGGKIICFEPHWISNMASYLLDGEKQSEFIQLGVLQKLFESDTQRNGKDGNIGMKIP 174 (284)
T ss_dssp SCGGGC--SSHHHHHHHHHHTEEEEEEEEEEECCHHHHHHSEEETTSCHHHHCCHHHHHHHHHHHHHHTCCCTTGGGTHH
T ss_pred ChhhcC--CCHHHHHHHHHHHcCCCCEEEEEecchhcccccceecCcchhhccchHHHHHHHHHHhhhhcccccHHHHHH
Confidence 999999 78999999999999999999998766110000 00000000000000000000001234566899
Q ss_pred HHHHHcCceEEEEEE
Q 045799 201 TLFLEAGFSTVDINI 215 (231)
Q Consensus 201 ~~l~~~Gf~~~~~~~ 215 (231)
++|+++||+.+++..
T Consensus 175 ~~l~~aGF~~v~~~~ 189 (284)
T 3gu3_A 175 IYLSELGVKNIECRV 189 (284)
T ss_dssp HHHHHTTCEEEEEEE
T ss_pred HHHHHcCCCeEEEEE
Confidence 999999999988754
No 67
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.59 E-value=2.5e-15 Score=117.73 Aligned_cols=141 Identities=13% Similarity=0.103 Sum_probs=91.7
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcc------cc---------------------------cCCC
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVND------DL---------------------------SRNV 117 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~------~~---------------------------~~~~ 117 (231)
.++.+|||||||+|.++..++.... ...+++++|+++. ++ ..++
T Consensus 42 ~~~~~vLDiGcG~G~~~~~l~~~~g---~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 118 (275)
T 3bkx_A 42 KPGEKILEIGCGQGDLSAVLADQVG---SSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDLGPI 118 (275)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHC---TTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCCGGG
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhC---CCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhccCCC
Confidence 6778999999999999988874310 1135566666543 11 1123
Q ss_pred CCCCeeEEEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccc----eEEeCCCeEEEe
Q 045799 118 NPSSVDVVTLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDS----FYVRGDGTCSFY 193 (231)
Q Consensus 118 ~~~~fD~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 193 (231)
++++||+|++..+++|+ .+...+++.+.++++|||.+++.++................+... ...........+
T Consensus 119 ~~~~fD~v~~~~~l~~~--~~~~~~~~~~~~l~~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (275)
T 3bkx_A 119 ADQHFDRVVLAHSLWYF--ASANALALLFKNMAAVCDHVDVAEWSMQPTALDQIGHLQAAMIQGLLYAIAPSDVANIRTL 196 (275)
T ss_dssp TTCCCSEEEEESCGGGS--SCHHHHHHHHHHHTTTCSEEEEEEECSSCSSGGGHHHHHHHHHHHHHHHHSCCTTCSCCCC
T ss_pred CCCCEEEEEEccchhhC--CCHHHHHHHHHHHhCCCCEEEEEEecCCCCchhhhhHHHHHHHHHHHhhcccccccccccc
Confidence 56789999999999999 667778888888888899999988766432111000000000000 000011222346
Q ss_pred eCHHHHHHHHHHcCceEEEEEEE
Q 045799 194 FSEDFLSTLFLEAGFSTVDINIH 216 (231)
Q Consensus 194 ~~~~~l~~~l~~~Gf~~~~~~~~ 216 (231)
++.+++.++++++||+++++...
T Consensus 197 ~s~~~l~~~l~~aGf~~~~~~~~ 219 (275)
T 3bkx_A 197 ITPDTLAQIAHDNTWTYTAGTIV 219 (275)
T ss_dssp CCHHHHHHHHHHHTCEEEECCCB
T ss_pred CCHHHHHHHHHHCCCeeEEEEEe
Confidence 89999999999999999988765
No 68
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.58 E-value=4.8e-15 Score=114.66 Aligned_cols=116 Identities=17% Similarity=0.346 Sum_probs=75.8
Q ss_pred HHhhHHHHHHhccCCcccchhhhHHhhcccccCCCCCCCCCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcc
Q 045799 32 AKKYWDGFYKRHKNKFFKDRHYLEKDWGNYFSDDSCCPNGNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVND 111 (231)
Q Consensus 32 ~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~ 111 (231)
.+.||+..+............++...+.... ..++.+|||+|||+|.++..++.. +.+++++|+++.
T Consensus 8 ~a~~yd~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~vLDlGcG~G~~~~~l~~~------~~~v~gvD~s~~ 74 (252)
T 1wzn_A 8 LAEYYDTIYRRRIERVKAEIDFVEEIFKEDA-------KREVRRVLDLACGTGIPTLELAER------GYEVVGLDLHEE 74 (252)
T ss_dssp TGGGHHHHTHHHHHTHHHHHHHHHHHHHHTC-------SSCCCEEEEETCTTCHHHHHHHHT------TCEEEEEESCHH
T ss_pred HHHHHHHHHhcchhhhHHHHHHHHHHHHHhc-------ccCCCEEEEeCCCCCHHHHHHHHC------CCeEEEEECCHH
Confidence 3467777664432222222223333333222 255689999999999999988744 235667776654
Q ss_pred cccC----------------------CCCCCCeeEEEEee-eeeccCCCCHHHHHHHHHHhcCCCeEEEEEec
Q 045799 112 DLSR----------------------NVNPSSVDVVTLIF-MLSAVSPKKMPLILQNIKAVLKPDGYILVCDY 161 (231)
Q Consensus 112 ~~~~----------------------~~~~~~fD~ii~~~-~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~ 161 (231)
++.. ++ .++||+|++.. .++|++.++...++++++++|+|||.+++...
T Consensus 75 ~l~~a~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~~ 146 (252)
T 1wzn_A 75 MLRVARRKAKERNLKIEFLQGDVLEIAF-KNEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITDFP 146 (252)
T ss_dssp HHHHHHHHHHHTTCCCEEEESCGGGCCC-CSCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHHhcCCceEEEECChhhccc-CCCccEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEecc
Confidence 4321 22 36899999874 46666556788999999999999999987543
No 69
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.58 E-value=6.4e-15 Score=109.22 Aligned_cols=111 Identities=14% Similarity=0.099 Sum_probs=85.7
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc------------------CCCCCCCeeEEEEe-eee
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS------------------RNVNPSSVDVVTLI-FML 131 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~------------------~~~~~~~fD~ii~~-~~l 131 (231)
.++.+|||+|||+|.++..++.. +.+++++|+++.++. .++++++||+|++. .++
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~------~~~v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~~~~~ 118 (195)
T 3cgg_A 45 PRGAKILDAGCGQGRIGGYLSKQ------GHDVLGTDLDPILIDYAKQDFPEARWVVGDLSVDQISETDFDLIVSAGNVM 118 (195)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHT------TCEEEEEESCHHHHHHHHHHCTTSEEEECCTTTSCCCCCCEEEEEECCCCG
T ss_pred cCCCeEEEECCCCCHHHHHHHHC------CCcEEEEcCCHHHHHHHHHhCCCCcEEEcccccCCCCCCceeEEEECCcHH
Confidence 56789999999999999988744 225566666543321 13456899999998 789
Q ss_pred eccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeEEEeeCHHHHHHHHHHcCceEE
Q 045799 132 SAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYFSEDFLSTLFLEAGFSTV 211 (231)
Q Consensus 132 ~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~ 211 (231)
+|+++++...+++++.++|+|||.+++...... .++.+++.++++++||+++
T Consensus 119 ~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~~~----------------------------~~~~~~~~~~l~~~Gf~~~ 170 (195)
T 3cgg_A 119 GFLAEDGREPALANIHRALGADGRAVIGFGAGR----------------------------GWVFGDFLEVAERVGLELE 170 (195)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEEETTS----------------------------SCCHHHHHHHHHHHTEEEE
T ss_pred hhcChHHHHHHHHHHHHHhCCCCEEEEEeCCCC----------------------------CcCHHHHHHHHHHcCCEEe
Confidence 998666778999999999999999998642210 1578899999999999998
Q ss_pred EEEE
Q 045799 212 DINI 215 (231)
Q Consensus 212 ~~~~ 215 (231)
++..
T Consensus 171 ~~~~ 174 (195)
T 3cgg_A 171 NAFE 174 (195)
T ss_dssp EEES
T ss_pred eeec
Confidence 8754
No 70
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.57 E-value=5.9e-15 Score=113.40 Aligned_cols=137 Identities=16% Similarity=0.242 Sum_probs=88.2
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc----------------------CCCCCCCeeEEEEe
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS----------------------RNVNPSSVDVVTLI 128 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~----------------------~~~~~~~fD~ii~~ 128 (231)
.++.+|||+|||+|.++..++.. .+++++|+++.++. .+++ ++||+|++.
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~-------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~ 103 (243)
T 3d2l_A 32 EPGKRIADIGCGTGTATLLLADH-------YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELELP-EPVDAITIL 103 (243)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTT-------SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCCCS-SCEEEEEEC
T ss_pred CCCCeEEEecCCCCHHHHHHhhC-------CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhcCCC-CCcCEEEEe
Confidence 55689999999999999888744 24556666543321 1223 789999998
Q ss_pred e-eeeccC-CCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhh----hhhc-------cccc----------cccceEEe
Q 045799 129 F-MLSAVS-PKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQV----KLLD-------RNQM----------IGDSFYVR 185 (231)
Q Consensus 129 ~-~l~~~~-~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~----~~~~-------~~~~----------~~~~~~~~ 185 (231)
. +++|+. +++...+++++.++|+|||.+++....+...... .+.. .+.. ....++..
T Consensus 104 ~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (243)
T 3d2l_A 104 CDSLNYLQTEADVKQTFDSAARLLTDGGKLLFDVHSPYKMETLFNGKTYATHAEQSSYIWFADPGEEPLSVVHELTFFIE 183 (243)
T ss_dssp TTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEEEECHHHHHTTTSSEEEEEECSSEEEEEEEEECSSTTEEEEEEEEEEE
T ss_pred CCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEEcCCHHHHHHhcCCcceeEECCCcEEEEEeecCccccEEEEEEEEEEE
Confidence 6 899983 4567889999999999999999865433211100 0000 0000 00001111
Q ss_pred -CC--------CeEEEeeCHHHHHHHHHHcCceEEEEEE
Q 045799 186 -GD--------GTCSFYFSEDFLSTLFLEAGFSTVDINI 215 (231)
Q Consensus 186 -~~--------~~~~~~~~~~~l~~~l~~~Gf~~~~~~~ 215 (231)
.. ..+..+++.+++.++|+++||+++++..
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~ 222 (243)
T 3d2l_A 184 GEDGRYDRVDETHHQRTYPPEQYITWLREAGFRVCAVTG 222 (243)
T ss_dssp CTTSCEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEEEE
T ss_pred cCCCceEEEEEEEeEecCCHHHHHHHHHHCCCeEEEEec
Confidence 11 1123578999999999999999998753
No 71
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.56 E-value=2.5e-15 Score=120.99 Aligned_cols=132 Identities=17% Similarity=0.092 Sum_probs=87.6
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccc-----------------------cccceeeeeecCCcccccCCCCCCCeeEEEE
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEF-----------------------REERVNAFVCNVVNDDLSRNVNPSSVDVVTL 127 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~-----------------------~~~~~~~~~~D~~~~~~~~~~~~~~fD~ii~ 127 (231)
.+..+|||||||+|..+..++....- -..++++...|+. .+++. +||+|++
T Consensus 168 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~-----~~~p~-~~D~v~~ 241 (332)
T 3i53_A 168 AALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDLQGPASAAHRRFLDTGLSGRAQVVVGSFF-----DPLPA-GAGGYVL 241 (332)
T ss_dssp GGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTT-----SCCCC-SCSEEEE
T ss_pred CCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecCHHHHHHHHHhhhhcCcCcCeEEecCCCC-----CCCCC-CCcEEEE
Confidence 45689999999999999888732110 0012334444443 12333 8999999
Q ss_pred eeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeEEEeeCHHHHHHHHHHcC
Q 045799 128 IFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYFSEDFLSTLFLEAG 207 (231)
Q Consensus 128 ~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~G 207 (231)
.+++||+++++...+++++++.|+|||++++.+...++....... ........ ....++.++|.++|+++|
T Consensus 242 ~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~------d~~~~~~~---~~~~~t~~e~~~ll~~aG 312 (332)
T 3i53_A 242 SAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGDEHAGTGM------DLRMLTYF---GGKERSLAELGELAAQAG 312 (332)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC---CCHHH------HHHHHHHH---SCCCCCHHHHHHHHHHTT
T ss_pred ehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCCCCccHHH------HHHHHhhC---CCCCCCHHHHHHHHHHCC
Confidence 999999965557899999999999999999988665542100000 00000000 012468999999999999
Q ss_pred ceEEEEEEEe
Q 045799 208 FSTVDINIHL 217 (231)
Q Consensus 208 f~~~~~~~~~ 217 (231)
|+++++...+
T Consensus 313 f~~~~~~~~~ 322 (332)
T 3i53_A 313 LAVRAAHPIS 322 (332)
T ss_dssp EEEEEEEECS
T ss_pred CEEEEEEECC
Confidence 9999987644
No 72
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.56 E-value=8.2e-15 Score=118.77 Aligned_cols=132 Identities=19% Similarity=0.180 Sum_probs=87.3
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCcc---------------------ccccceeeeeecCCcccccCCCCCCCeeEEEEee
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSE---------------------FREERVNAFVCNVVNDDLSRNVNPSSVDVVTLIF 129 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~---------------------~~~~~~~~~~~D~~~~~~~~~~~~~~fD~ii~~~ 129 (231)
.++.+|||||||+|..+..++.... ....++++...|+. .+++ +||+|++.+
T Consensus 183 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~~~~~~~~~~~~v~~~~~d~~-----~~~p--~~D~v~~~~ 255 (348)
T 3lst_A 183 PATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRAEVVARHRLDAPDVAGRWKVVEGDFL-----REVP--HADVHVLKR 255 (348)
T ss_dssp CSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECHHHHTTCCCCCGGGTTSEEEEECCTT-----TCCC--CCSEEEEES
T ss_pred cCCceEEEECCccCHHHHHHHHHCCCCEEEEecCHHHhhcccccccCCCCCeEEEecCCC-----CCCC--CCcEEEEeh
Confidence 5678999999999999998873211 00112333444442 1233 899999999
Q ss_pred eeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeEEEeeCHHHHHHHHHHcCce
Q 045799 130 MLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYFSEDFLSTLFLEAGFS 209 (231)
Q Consensus 130 ~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~ 209 (231)
++||+++++...+++++++.|||||++++.+...++........ ....... ...+ ...++.++|.++|+++||+
T Consensus 256 vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~~~~---~~d~~~~-~~~~--~~~~t~~e~~~ll~~aGf~ 329 (348)
T 3lst_A 256 ILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAHQSK---EMDFMML-AART--GQERTAAELEPLFTAAGLR 329 (348)
T ss_dssp CGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCCHHH---HHHHHHH-HTTS--CCCCBHHHHHHHHHHTTEE
T ss_pred hccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhh---hcChhhh-hcCC--CcCCCHHHHHHHHHHCCCc
Confidence 99999654557999999999999999999886554331110000 0000000 0000 1246899999999999999
Q ss_pred EEEEEE
Q 045799 210 TVDINI 215 (231)
Q Consensus 210 ~~~~~~ 215 (231)
++++..
T Consensus 330 ~~~~~~ 335 (348)
T 3lst_A 330 LDRVVG 335 (348)
T ss_dssp EEEEEE
T ss_pred eEEEEE
Confidence 998865
No 73
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.55 E-value=1.5e-14 Score=110.05 Aligned_cols=87 Identities=20% Similarity=0.350 Sum_probs=64.0
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc----------------------CCCCCCCeeEEEEe
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS----------------------RNVNPSSVDVVTLI 128 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~----------------------~~~~~~~fD~ii~~ 128 (231)
.++.+|||+|||+|.++..++.... +++++|+++.++. .++++++||+|++.
T Consensus 37 ~~~~~vLDlG~G~G~~~~~l~~~~~------~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~ 110 (227)
T 1ve3_A 37 KKRGKVLDLACGVGGFSFLLEDYGF------EVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSFEDKTFDYVIFI 110 (227)
T ss_dssp CSCCEEEEETCTTSHHHHHHHHTTC------EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSCTTCEEEEEEE
T ss_pred CCCCeEEEEeccCCHHHHHHHHcCC------EEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCCCCCCcEEEEEEc
Confidence 4478999999999999988874311 4445555433221 13456799999999
Q ss_pred eeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccC
Q 045799 129 FMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAI 163 (231)
Q Consensus 129 ~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~ 163 (231)
.++++...++...++++++++|+|||.+++.++..
T Consensus 111 ~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 145 (227)
T 1ve3_A 111 DSIVHFEPLELNQVFKEVRRVLKPSGKFIMYFTDL 145 (227)
T ss_dssp SCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred CchHhCCHHHHHHHHHHHHHHcCCCcEEEEEecCh
Confidence 99444433678899999999999999999987653
No 74
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.54 E-value=4.6e-15 Score=120.92 Aligned_cols=141 Identities=18% Similarity=0.176 Sum_probs=89.2
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccc-----------------------cccceeeeeecCCcccccCCCCCCCeeEEEE
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEF-----------------------REERVNAFVCNVVNDDLSRNVNPSSVDVVTL 127 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~-----------------------~~~~~~~~~~D~~~~~~~~~~~~~~fD~ii~ 127 (231)
....+|||||||+|.++..++....- ...++++...|+..... +++ ++||+|++
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~--~~p-~~~D~v~~ 254 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDLPQQLEMMRKQTAGLSGSERIHGHGANLLDRDV--PFP-TGFDAVWM 254 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEECHHHHHHHHHHHTTCTTGGGEEEEECCCCSSSC--CCC-CCCSEEEE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeCHHHHHHHHHHHHhcCcccceEEEEccccccCC--CCC-CCcCEEEE
Confidence 35689999999999999988732110 00234444444432210 233 68999999
Q ss_pred eeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeEEEeeCHHHHHHHHHHcC
Q 045799 128 IFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYFSEDFLSTLFLEAG 207 (231)
Q Consensus 128 ~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~G 207 (231)
..++|++++++...+++++++.|+|||.+++.+...++................+. .........++.++|.++|+++|
T Consensus 255 ~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~t~~e~~~ll~~AG 333 (363)
T 3dp7_A 255 SQFLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWDRQRYETASYCLTQISLYFT-AMANGNSKMFHSDDLIRCIENAG 333 (363)
T ss_dssp ESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTTSCSSHHHHHHHHHHHHHHH-HSSCSSCCSCCHHHHHHHHHTTT
T ss_pred echhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccCCccccchhhHHHHhhhhHH-hhhCCCCcccCHHHHHHHHHHcC
Confidence 99999997666778999999999999999998865544221100000000000000 00000112468999999999999
Q ss_pred ceEEEEEE
Q 045799 208 FSTVDINI 215 (231)
Q Consensus 208 f~~~~~~~ 215 (231)
|+++++..
T Consensus 334 f~~v~~~~ 341 (363)
T 3dp7_A 334 LEVEEIQD 341 (363)
T ss_dssp EEESCCCC
T ss_pred CeEEEEEe
Confidence 99988753
No 75
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.54 E-value=5.5e-15 Score=120.62 Aligned_cols=138 Identities=15% Similarity=0.193 Sum_probs=88.5
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccc----------------cccceeeeeecCCcccccCCCCCCCeeEEEEeeeeecc
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEF----------------REERVNAFVCNVVNDDLSRNVNPSSVDVVTLIFMLSAV 134 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~----------------~~~~~~~~~~D~~~~~~~~~~~~~~fD~ii~~~~l~~~ 134 (231)
.+..+|||||||+|.++..++....- ...++++...|+.. +++.+ |+|++..++||+
T Consensus 202 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~v~~~~~d~~~-----~~p~~--D~v~~~~vlh~~ 274 (368)
T 3reo_A 202 EGLTTIVDVGGGTGAVASMIVAKYPSINAINFDLPHVIQDAPAFSGVEHLGGDMFD-----GVPKG--DAIFIKWICHDW 274 (368)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCCCTTEEEEECCTTT-----CCCCC--SEEEEESCGGGB
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEehHHHHHhhhhcCCCEEEecCCCC-----CCCCC--CEEEEechhhcC
Confidence 55689999999999999999832110 01233444444431 33443 999999999999
Q ss_pred CCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhh-hccccccccceEEeCCCeEEEeeCHHHHHHHHHHcCceEEEE
Q 045799 135 SPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKL-LDRNQMIGDSFYVRGDGTCSFYFSEDFLSTLFLEAGFSTVDI 213 (231)
Q Consensus 135 ~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~ 213 (231)
++++...+++++++.|+|||.+++.+...++...... ................+ ...++.++|.++|+++||+++++
T Consensus 275 ~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~--g~~rt~~e~~~ll~~AGF~~v~~ 352 (368)
T 3reo_A 275 SDEHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNPG--GKERTEKEFQALAMASGFRGFKV 352 (368)
T ss_dssp CHHHHHHHHHHHHHHSCTTCEEEEEECCCCSSCCCCHHHHHHHHHHHHHHHHSSB--CCCCCHHHHHHHHHHTTCCEEEE
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhhhHHHhhhHHHHhhcCC--CccCCHHHHHHHHHHCCCeeeEE
Confidence 7666779999999999999999999876543221000 00000000000000000 12368999999999999999998
Q ss_pred EEEe
Q 045799 214 NIHL 217 (231)
Q Consensus 214 ~~~~ 217 (231)
....
T Consensus 353 ~~~~ 356 (368)
T 3reo_A 353 ASCA 356 (368)
T ss_dssp EEEE
T ss_pred EEeC
Confidence 7654
No 76
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.54 E-value=3.1e-15 Score=116.42 Aligned_cols=137 Identities=20% Similarity=0.218 Sum_probs=89.3
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc-----------------CCCCCCCeeEEEEeeeeec
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS-----------------RNVNPSSVDVVTLIFMLSA 133 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~-----------------~~~~~~~fD~ii~~~~l~~ 133 (231)
.++.+|||||||+|.++..++.. +.+++++|+++.++. .++++++||+|++..++.|
T Consensus 53 ~~~~~vLDiGcG~G~~~~~l~~~------~~~v~gvD~s~~~l~~a~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~~~ 126 (260)
T 2avn_A 53 KNPCRVLDLGGGTGKWSLFLQER------GFEVVLVDPSKEMLEVAREKGVKNVVEAKAEDLPFPSGAFEAVLALGDVLS 126 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHHTT------TCEEEEEESCHHHHHHHHHHTCSCEEECCTTSCCSCTTCEEEEEECSSHHH
T ss_pred CCCCeEEEeCCCcCHHHHHHHHc------CCeEEEEeCCHHHHHHHHhhcCCCEEECcHHHCCCCCCCEEEEEEcchhhh
Confidence 36789999999999999988754 236677777655432 2456789999999987766
Q ss_pred cCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhh-----hhhccccccccceEE-eCCC--eEEEeeCHHHHHHHHHH
Q 045799 134 VSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQV-----KLLDRNQMIGDSFYV-RGDG--TCSFYFSEDFLSTLFLE 205 (231)
Q Consensus 134 ~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~-----~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~l~~~l~~ 205 (231)
+. +++..+++++.++|+|||.+++..++....... .+......+...... .... ....+++.+++.++
T Consensus 127 ~~-~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l--- 202 (260)
T 2avn_A 127 YV-ENKDKAFSEIRRVLVPDGLLIATVDNFYTFLQQMIEKDAWDQITRFLKTQTTSVGTTLFSFNSYAFKPEDLDSL--- 202 (260)
T ss_dssp HC-SCHHHHHHHHHHHEEEEEEEEEEEEBHHHHHHHHHHTTCHHHHHHHHHHCEEEEECSSEEEEEECBCGGGGSSC---
T ss_pred cc-ccHHHHHHHHHHHcCCCeEEEEEeCChHHHHHHhhcchhHHHHHHHHhccccccCCCceeEEEeccCHHHHHHh---
Confidence 64 349999999999999999999987654311100 000000000000000 0000 11236899898888
Q ss_pred cCceEEEEEEEe
Q 045799 206 AGFSTVDINIHL 217 (231)
Q Consensus 206 ~Gf~~~~~~~~~ 217 (231)
+||+++++....
T Consensus 203 aGf~~~~~~~~~ 214 (260)
T 2avn_A 203 EGFETVDIRGIG 214 (260)
T ss_dssp TTEEEEEEEEEC
T ss_pred cCceEEEEECCC
Confidence 999999887644
No 77
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.54 E-value=2.8e-15 Score=121.69 Aligned_cols=136 Identities=17% Similarity=0.261 Sum_probs=86.8
Q ss_pred CCeEEEEcCCCCcchHHHhcCcccc-----------------------ccceeeeeecCCcccccCCCCCCCeeEEEEee
Q 045799 73 PKVVLEVGCGAGNTIFPLVSHSEFR-----------------------EERVNAFVCNVVNDDLSRNVNPSSVDVVTLIF 129 (231)
Q Consensus 73 ~~~iLdvGcG~G~~~~~l~~~~~~~-----------------------~~~~~~~~~D~~~~~~~~~~~~~~fD~ii~~~ 129 (231)
+.+|||||||+|.++..++...... ..++.+...|+.... ++..+.||+|++.+
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~~~~~~D~v~~~~ 256 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDLPTTRDAARKTIHAHDLGGRVEFFEKNLLDAR---NFEGGAADVVMLND 256 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEECGGGHHHHHHHHHHTTCGGGEEEEECCTTCGG---GGTTCCEEEEEEES
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHHhcCCCCceEEEeCCcccCc---ccCCCCccEEEEec
Confidence 7899999999999999887321100 012333333333211 11345799999999
Q ss_pred eeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeEEEeeCHHHHHHHHHHcCce
Q 045799 130 MLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYFSEDFLSTLFLEAGFS 209 (231)
Q Consensus 130 ~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~ 209 (231)
++||+++++...+++++++.|+|||.+++.+...++......... ...........+ ...++.++|.++|+++||+
T Consensus 257 vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~--~~~~~~~~~~~~--~~~~t~~e~~~ll~~aGf~ 332 (352)
T 3mcz_A 257 CLHYFDAREAREVIGHAAGLVKPGGALLILTMTMNDDRVTPALSA--DFSLHMMVNTNH--GELHPTPWIAGVVRDAGLA 332 (352)
T ss_dssp CGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSHHHH--HHHHHHHHHSTT--CCCCCHHHHHHHHHHTTCE
T ss_pred ccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCchHH--HhhHHHHhhCCC--CCcCCHHHHHHHHHHCCCc
Confidence 999996656799999999999999999998866554321100000 000000000000 1236899999999999999
Q ss_pred EEEEEE
Q 045799 210 TVDINI 215 (231)
Q Consensus 210 ~~~~~~ 215 (231)
+++...
T Consensus 333 ~~~~~~ 338 (352)
T 3mcz_A 333 VGERSI 338 (352)
T ss_dssp EEEEEE
T ss_pred eeeecc
Confidence 998543
No 78
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.53 E-value=9.1e-15 Score=110.49 Aligned_cols=87 Identities=22% Similarity=0.302 Sum_probs=65.8
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC--------------------CCCCCCeeEEEEeee
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR--------------------NVNPSSVDVVTLIFM 130 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~--------------------~~~~~~fD~ii~~~~ 130 (231)
.++.+|||+|||+|.++..++.. ..+++++|+++.++.. ..++++||+|++..+
T Consensus 50 ~~~~~vLDiGcG~G~~~~~l~~~------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~ 123 (216)
T 3ofk_A 50 GAVSNGLEIGCAAGAFTEKLAPH------CKRLTVIDVMPRAIGRACQRTKRWSHISWAATDILQFSTAELFDLIVVAEV 123 (216)
T ss_dssp SSEEEEEEECCTTSHHHHHHGGG------EEEEEEEESCHHHHHHHHHHTTTCSSEEEEECCTTTCCCSCCEEEEEEESC
T ss_pred CCCCcEEEEcCCCCHHHHHHHHc------CCEEEEEECCHHHHHHHHHhcccCCCeEEEEcchhhCCCCCCccEEEEccH
Confidence 56789999999999999988743 2355666665543311 114689999999999
Q ss_pred eeccCC-CCHHHHHHHHHHhcCCCeEEEEEeccC
Q 045799 131 LSAVSP-KKMPLILQNIKAVLKPDGYILVCDYAI 163 (231)
Q Consensus 131 l~~~~~-~~~~~~l~~~~~~Lk~gG~l~i~~~~~ 163 (231)
++|++. ++...+++++.++|+|||.+++.+...
T Consensus 124 l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 157 (216)
T 3ofk_A 124 LYYLEDMTQMRTAIDNMVKMLAPGGHLVFGSARD 157 (216)
T ss_dssp GGGSSSHHHHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred HHhCCCHHHHHHHHHHHHHHcCCCCEEEEEecCC
Confidence 999942 333678999999999999999976544
No 79
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.53 E-value=8.2e-15 Score=119.40 Aligned_cols=138 Identities=16% Similarity=0.184 Sum_probs=89.4
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccc----------------cccceeeeeecCCcccccCCCCCCCeeEEEEeeeeecc
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEF----------------REERVNAFVCNVVNDDLSRNVNPSSVDVVTLIFMLSAV 134 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~----------------~~~~~~~~~~D~~~~~~~~~~~~~~fD~ii~~~~l~~~ 134 (231)
.+..+|||||||+|.++..++....- ...+++++..|+.. +++.+ |+|++.+++|++
T Consensus 200 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~v~~~~~D~~~-----~~p~~--D~v~~~~vlh~~ 272 (364)
T 3p9c_A 200 EGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDLPHVISEAPQFPGVTHVGGDMFK-----EVPSG--DTILMKWILHDW 272 (364)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCCCTTEEEEECCTTT-----CCCCC--SEEEEESCGGGS
T ss_pred cCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecCHHHHHhhhhcCCeEEEeCCcCC-----CCCCC--CEEEehHHhccC
Confidence 56789999999999999999832110 01234444444432 33443 999999999999
Q ss_pred CCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhc-cccccccceEEeCCCeEEEeeCHHHHHHHHHHcCceEEEE
Q 045799 135 SPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLD-RNQMIGDSFYVRGDGTCSFYFSEDFLSTLFLEAGFSTVDI 213 (231)
Q Consensus 135 ~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~ 213 (231)
++++...+++++++.|+|||.+++.+...++........ ..............+ ...++.++|.++|+++||+++++
T Consensus 273 ~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~m~~~~~~--g~~rt~~e~~~ll~~AGF~~v~~ 350 (364)
T 3p9c_A 273 SDQHCATLLKNCYDALPAHGKVVLVQCILPVNPEANPSSQGVFHVDMIMLAHNPG--GRERYEREFQALARGAGFTGVKS 350 (364)
T ss_dssp CHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSCCSSHHHHHHHHHHHHHHHHCSS--CCCCBHHHHHHHHHHTTCCEEEE
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCcchhhhhHHHhHHHHHhcccC--CccCCHHHHHHHHHHCCCceEEE
Confidence 777778999999999999999999987654421100000 000000000000000 12368999999999999999998
Q ss_pred EEEe
Q 045799 214 NIHL 217 (231)
Q Consensus 214 ~~~~ 217 (231)
....
T Consensus 351 ~~~~ 354 (364)
T 3p9c_A 351 TYIY 354 (364)
T ss_dssp EEEE
T ss_pred EEcC
Confidence 7654
No 80
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.53 E-value=2.2e-14 Score=117.13 Aligned_cols=132 Identities=16% Similarity=0.177 Sum_probs=88.1
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccc-----------------------cCCCCCCCeeEEEE
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDL-----------------------SRNVNPSSVDVVTL 127 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~-----------------------~~~~~~~~fD~ii~ 127 (231)
.+..+|||||||+|.++..++... . .++++++|+ +.++ ..+++. .||+|++
T Consensus 201 ~~~~~vlDvG~G~G~~~~~l~~~~--p--~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~p~-~~D~v~~ 274 (369)
T 3gwz_A 201 SGAATAVDIGGGRGSLMAAVLDAF--P--GLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFFETIPD-GADVYLI 274 (369)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHC--T--TCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTTCCCS-SCSEEEE
T ss_pred ccCcEEEEeCCCccHHHHHHHHHC--C--CCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCCCCCCC-CceEEEh
Confidence 567899999999999999887321 1 223344443 2211 013344 7999999
Q ss_pred eeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeEEEeeCHHHHHHHHHHcC
Q 045799 128 IFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYFSEDFLSTLFLEAG 207 (231)
Q Consensus 128 ~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~G 207 (231)
.+++|++++++...+++++++.|+|||++++.+...++..... . . ........... ...++.++|.++|+++|
T Consensus 275 ~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~-~-~--~~d~~~~~~~~---g~~~t~~e~~~ll~~aG 347 (369)
T 3gwz_A 275 KHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDERPAAS-T-L--FVDLLLLVLVG---GAERSESEFAALLEKSG 347 (369)
T ss_dssp ESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHH-H-H--HHHHHHHHHHS---CCCBCHHHHHHHHHTTT
T ss_pred hhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCc-h-h--HhhHHHHhhcC---CccCCHHHHHHHHHHCC
Confidence 9999999655556899999999999999999887665432111 0 0 00000000000 12478999999999999
Q ss_pred ceEEEEEE
Q 045799 208 FSTVDINI 215 (231)
Q Consensus 208 f~~~~~~~ 215 (231)
|+++++..
T Consensus 348 f~~~~~~~ 355 (369)
T 3gwz_A 348 LRVERSLP 355 (369)
T ss_dssp EEEEEEEE
T ss_pred CeEEEEEE
Confidence 99999865
No 81
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.52 E-value=6.3e-15 Score=114.05 Aligned_cols=84 Identities=8% Similarity=0.010 Sum_probs=68.7
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC-----------------CC-----CCCCeeEEEEe
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR-----------------NV-----NPSSVDVVTLI 128 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~-----------------~~-----~~~~fD~ii~~ 128 (231)
.++.+|||||||+|.++..++.. +.+++++|+++.|+.. .. .+++||+|++.
T Consensus 44 ~~g~~VLDlGcGtG~~a~~La~~------g~~V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~~~~~~~~~~~~~fD~Vv~~ 117 (261)
T 3iv6_A 44 VPGSTVAVIGASTRFLIEKALER------GASVTVFDFSQRMCDDLAEALADRCVTIDLLDITAEIPKELAGHFDFVLND 117 (261)
T ss_dssp CTTCEEEEECTTCHHHHHHHHHT------TCEEEEEESCHHHHHHHHHHTSSSCCEEEECCTTSCCCGGGTTCCSEEEEE
T ss_pred CCcCEEEEEeCcchHHHHHHHhc------CCEEEEEECCHHHHHHHHHHHHhccceeeeeecccccccccCCCccEEEEh
Confidence 67889999999999999999854 3367788888766531 11 14689999999
Q ss_pred eeeeccCCCCHHHHHHHHHHhcCCCeEEEEEec
Q 045799 129 FMLSAVSPKKMPLILQNIKAVLKPDGYILVCDY 161 (231)
Q Consensus 129 ~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~ 161 (231)
.+++|+++++...+++++.++| |||.++++..
T Consensus 118 ~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~ 149 (261)
T 3iv6_A 118 RLINRFTTEEARRACLGMLSLV-GSGTVRASVK 149 (261)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEEE
T ss_pred hhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEec
Confidence 9999997778889999999999 9999998753
No 82
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.52 E-value=4.1e-15 Score=119.83 Aligned_cols=136 Identities=17% Similarity=0.184 Sum_probs=88.8
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc------------------------CCCCCCCeeEEE
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS------------------------RNVNPSSVDVVT 126 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~------------------------~~~~~~~fD~ii 126 (231)
.++.+|||||||+|.++..++.... ..+++++|++ .++. .+++ +.||+|+
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p----~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~D~v~ 237 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNP----NAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVDYG-NDYDLVL 237 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCT----TCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSCCC-SCEEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCC----CCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCCCC-CCCcEEE
Confidence 5568999999999999988874321 2234444443 2211 1233 3499999
Q ss_pred EeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeEEEeeCHHHHHHHHHHc
Q 045799 127 LIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYFSEDFLSTLFLEA 206 (231)
Q Consensus 127 ~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 206 (231)
+.+++||+++++...+++++++.|+|||.+++.++..++......... ........... ....++.++|.++++++
T Consensus 238 ~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~t~~~~~~ll~~a 313 (335)
T 2r3s_A 238 LPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPNSDRITPPDAA--AFSLVMLATTP--NGDAYTFAEYESMFSNA 313 (335)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCSHHHH--HHHHHHHHHSS--SCCCCCHHHHHHHHHHT
T ss_pred EcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCchHHH--HHHHHHHeeCC--CCCcCCHHHHHHHHHHC
Confidence 999999997666789999999999999999998876654211000000 00000000000 01347899999999999
Q ss_pred CceEEEEEEE
Q 045799 207 GFSTVDINIH 216 (231)
Q Consensus 207 Gf~~~~~~~~ 216 (231)
||+++++...
T Consensus 314 Gf~~~~~~~~ 323 (335)
T 2r3s_A 314 GFSHSQLHSL 323 (335)
T ss_dssp TCSEEEEECC
T ss_pred CCCeeeEEEC
Confidence 9999987553
No 83
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.51 E-value=1.9e-14 Score=113.41 Aligned_cols=121 Identities=19% Similarity=0.292 Sum_probs=86.8
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC---------------------CCCCCCeeEEEEee
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR---------------------NVNPSSVDVVTLIF 129 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~---------------------~~~~~~fD~ii~~~ 129 (231)
.++.+|||+|||+|.++..++.. +.+++++|++..++.. ...+++||+|++..
T Consensus 119 ~~~~~vLD~GcG~G~~~~~l~~~------g~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~fD~i~~~~ 192 (286)
T 3m70_A 119 ISPCKVLDLGCGQGRNSLYLSLL------GYDVTSWDHNENSIAFLNETKEKENLNISTALYDINAANIQENYDFIVSTV 192 (286)
T ss_dssp SCSCEEEEESCTTCHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCCCSCEEEEEECS
T ss_pred cCCCcEEEECCCCCHHHHHHHHC------CCeEEEEECCHHHHHHHHHHHHHcCCceEEEEeccccccccCCccEEEEcc
Confidence 35789999999999999998844 2355666666544321 11267899999999
Q ss_pred eeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeEEEeeCHHHHHHHHHHcCce
Q 045799 130 MLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYFSEDFLSTLFLEAGFS 209 (231)
Q Consensus 130 ~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~ 209 (231)
+++|+++++...+++++.++|+|||.+++........... .......++..++.+++.. |+
T Consensus 193 ~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~-----------------~~~~~~~~~~~~l~~~~~~--~~ 253 (286)
T 3m70_A 193 VFMFLNRERVPSIIKNMKEHTNVGGYNLIVAAMSTDDVPC-----------------PLPFSFTFAENELKEYYKD--WE 253 (286)
T ss_dssp SGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCC-----------------SSCCSCCBCTTHHHHHTTT--SE
T ss_pred chhhCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCCCCC-----------------CCCccccCCHHHHHHHhcC--CE
Confidence 9999987788899999999999999987765433221100 0011234778899999854 99
Q ss_pred EEEEEEE
Q 045799 210 TVDINIH 216 (231)
Q Consensus 210 ~~~~~~~ 216 (231)
++.....
T Consensus 254 ~~~~~~~ 260 (286)
T 3m70_A 254 FLEYNEN 260 (286)
T ss_dssp EEEEECC
T ss_pred EEEEEcc
Confidence 9888644
No 84
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.51 E-value=1.9e-14 Score=115.89 Aligned_cols=131 Identities=15% Similarity=0.205 Sum_probs=86.9
Q ss_pred CeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc-----------------------CCCCCCCeeEEEEeee
Q 045799 74 KVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS-----------------------RNVNPSSVDVVTLIFM 130 (231)
Q Consensus 74 ~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~-----------------------~~~~~~~fD~ii~~~~ 130 (231)
.+|||||||+|..+..++... . ..+++++|+ +.++. .+++ ++||+|++.++
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~--p--~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~D~v~~~~v 242 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAE--P--SARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQEVP-SNGDIYLLSRI 242 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHC--T--TCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTTCCC-SSCSEEEEESC
T ss_pred CEEEEeCCCchHHHHHHHHHC--C--CCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCCCCC-CCCCEEEEchh
Confidence 899999999999998887331 1 224455554 33321 1223 57999999999
Q ss_pred eeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeEEEeeCHHHHHHHHHHcCceE
Q 045799 131 LSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYFSEDFLSTLFLEAGFST 210 (231)
Q Consensus 131 l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~ 210 (231)
+||+++++...+++++++.|+|||.+++.+...++........ ........... ...++.++|.++++++||++
T Consensus 243 l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~---~~~~~~~~~~~---~~~~t~~e~~~ll~~aGf~~ 316 (334)
T 2ip2_A 243 IGDLDEAASLRLLGNCREAMAGDGRVVVIERTISASEPSPMSV---LWDVHLFMACA---GRHRTTEEVVDLLGRGGFAV 316 (334)
T ss_dssp GGGCCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSSCCHHHH---HHHHHHHHHHS---CCCCBHHHHHHHHHHTTEEE
T ss_pred ccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhH---HhhhHhHhhCC---CcCCCHHHHHHHHHHCCCce
Confidence 9999655566999999999999999999986654321100000 00000000000 12358999999999999999
Q ss_pred EEEEEE
Q 045799 211 VDINIH 216 (231)
Q Consensus 211 ~~~~~~ 216 (231)
+++...
T Consensus 317 ~~~~~~ 322 (334)
T 2ip2_A 317 ERIVDL 322 (334)
T ss_dssp EEEEEE
T ss_pred eEEEEC
Confidence 988654
No 85
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.51 E-value=1.7e-14 Score=117.44 Aligned_cols=135 Identities=19% Similarity=0.235 Sum_probs=87.8
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc-----------------------CCCCCCCeeEEEE
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS-----------------------RNVNPSSVDVVTL 127 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~-----------------------~~~~~~~fD~ii~ 127 (231)
.++.+|||||||+|.++..++.... .+.++++|+ +.++. .+++. .||+|++
T Consensus 182 ~~~~~vLDvG~G~G~~~~~l~~~~~----~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~D~v~~ 255 (360)
T 1tw3_A 182 TNVRHVLDVGGGKGGFAAAIARRAP----HVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFEPLPR-KADAIIL 255 (360)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCT----TCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTSCCSS-CEEEEEE
T ss_pred ccCcEEEEeCCcCcHHHHHHHHhCC----CCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCCCCC-CccEEEE
Confidence 5678999999999999988873211 223344443 22110 12233 4999999
Q ss_pred eeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEecc-CCchhhhhhhccccccccceEEeCCCeEEEeeCHHHHHHHHHHc
Q 045799 128 IFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYA-IGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYFSEDFLSTLFLEA 206 (231)
Q Consensus 128 ~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 206 (231)
.+++||+++++...+++++++.|+|||.+++.++. .++.....+.. .......... + ...++.++|.++|+++
T Consensus 256 ~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~---~~~~~~~~~~-~--~~~~t~~e~~~ll~~a 329 (360)
T 1tw3_A 256 SFVLLNWPDHDAVRILTRCAEALEPGGRILIHERDDLHENSFNEQFT---ELDLRMLVFL-G--GALRTREKWDGLAASA 329 (360)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCSHHHH---HHHHHHHHHH-S--CCCCBHHHHHHHHHHT
T ss_pred cccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCcchhh---hccHHHhhhc-C--CcCCCHHHHHHHHHHC
Confidence 99999996545578999999999999999998876 33221100000 0000000000 0 1347999999999999
Q ss_pred CceEEEEEEEe
Q 045799 207 GFSTVDINIHL 217 (231)
Q Consensus 207 Gf~~~~~~~~~ 217 (231)
||+++++...+
T Consensus 330 Gf~~~~~~~~~ 340 (360)
T 1tw3_A 330 GLVVEEVRQLP 340 (360)
T ss_dssp TEEEEEEEEEE
T ss_pred CCeEEEEEeCC
Confidence 99999987764
No 86
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.50 E-value=1.1e-14 Score=119.05 Aligned_cols=135 Identities=21% Similarity=0.222 Sum_probs=85.8
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc-----------------------CCCCCCCeeEEEE
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS-----------------------RNVNPSSVDVVTL 127 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~-----------------------~~~~~~~fD~ii~ 127 (231)
.++.+|||||||+|.++..++.... .++++++|+ +.++. .+++. .||+|++
T Consensus 181 ~~~~~vlDvG~G~G~~~~~l~~~~~----~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~D~v~~ 254 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAAIALRAP----HLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFKPLPV-TADVVLL 254 (374)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHCT----TCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSC-CEEEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCC----CCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCcCCC-CCCEEEE
Confidence 5678999999999999988873321 223444443 22211 12232 4999999
Q ss_pred eeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEec--cCCchhhhhhhccccccccceEEeCCCeEEEeeCHHHHHHHHHH
Q 045799 128 IFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDY--AIGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYFSEDFLSTLFLE 205 (231)
Q Consensus 128 ~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 205 (231)
.+++||+++++...+++++++.|+|||.+++.+. ..++........ .....+..... ...++.++|.++|++
T Consensus 255 ~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~---~~~~~~~~~~~---~~~~~~~~~~~ll~~ 328 (374)
T 1qzz_A 255 SFVLLNWSDEDALTILRGCVRALEPGGRLLVLDRADVEGDGADRFFST---LLDLRMLTFMG---GRVRTRDEVVDLAGS 328 (374)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCH-------HHHHH---HHHHHHHHHHS---CCCCCHHHHHHHHHT
T ss_pred eccccCCCHHHHHHHHHHHHHhcCCCcEEEEEechhhcCCCCCcchhh---hcchHHHHhCC---CcCCCHHHHHHHHHH
Confidence 9999999544446899999999999999999887 433211100000 00000000000 134799999999999
Q ss_pred cCceEEEEEEEe
Q 045799 206 AGFSTVDINIHL 217 (231)
Q Consensus 206 ~Gf~~~~~~~~~ 217 (231)
+||+++++...+
T Consensus 329 aGf~~~~~~~~~ 340 (374)
T 1qzz_A 329 AGLALASERTSG 340 (374)
T ss_dssp TTEEEEEEEEEC
T ss_pred CCCceEEEEECC
Confidence 999999987654
No 87
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.50 E-value=2.1e-14 Score=116.79 Aligned_cols=137 Identities=13% Similarity=0.191 Sum_probs=89.7
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc------------------------CCCCCCCeeEEE
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS------------------------RNVNPSSVDVVT 126 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~------------------------~~~~~~~fD~ii 126 (231)
.++.+|||||||+|.++..++.... ..+++++|+ +.++. .+++ .+|+|+
T Consensus 189 ~~~~~vLDvG~G~G~~~~~l~~~~p----~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~--~~D~v~ 261 (359)
T 1x19_A 189 DGVKKMIDVGGGIGDISAAMLKHFP----ELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESYP--EADAVL 261 (359)
T ss_dssp TTCCEEEEESCTTCHHHHHHHHHCT----TCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCC--CCSEEE
T ss_pred CCCCEEEEECCcccHHHHHHHHHCC----CCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCCC--CCCEEE
Confidence 5678999999999999998874321 234455555 33321 1222 349999
Q ss_pred EeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeEEEeeCHHHHHHHHHHc
Q 045799 127 LIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYFSEDFLSTLFLEA 206 (231)
Q Consensus 127 ~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 206 (231)
+..++||+++++...+++++++.|+|||.+++.++..++.....+......+.. .........+++.++|.++|+++
T Consensus 262 ~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~---~~~g~~~~~~~t~~e~~~ll~~a 338 (359)
T 1x19_A 262 FCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVIDDPENPNFDYLSHYILG---AGMPFSVLGFKEQARYKEILESL 338 (359)
T ss_dssp EESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECCCCTTSCCHHHHHHHGGG---GGSSCCCCCCCCGGGHHHHHHHH
T ss_pred EechhccCCHHHHHHHHHHHHHhcCCCCEEEEEecccCCCCCchHHHHHHHHHh---cCCCCcccCCCCHHHHHHHHHHC
Confidence 999999996555899999999999999999998866543211000000000000 00000112357899999999999
Q ss_pred CceEEEEEEEe
Q 045799 207 GFSTVDINIHL 217 (231)
Q Consensus 207 Gf~~~~~~~~~ 217 (231)
||+++++....
T Consensus 339 Gf~~v~~~~~~ 349 (359)
T 1x19_A 339 GYKDVTMVRKY 349 (359)
T ss_dssp TCEEEEEEEET
T ss_pred CCceEEEEecC
Confidence 99999887653
No 88
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.50 E-value=5.5e-15 Score=113.42 Aligned_cols=127 Identities=17% Similarity=0.204 Sum_probs=83.1
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC------------------------CCCCCCeeEEE
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR------------------------NVNPSSVDVVT 126 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~------------------------~~~~~~fD~ii 126 (231)
.++.+|||||||+|..+..++... ..+++++|+++.++.. ++++++||.|+
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~-----~~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~ 133 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAP-----IDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGIL 133 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSC-----EEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEE
T ss_pred cCCCeEEEECCCccHHHHHHHHhC-----CcEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEE
Confidence 678999999999999998887432 1256778887665431 46778999997
Q ss_pred E-----eeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeEEEeeCHHHHHH
Q 045799 127 L-----IFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYFSEDFLST 201 (231)
Q Consensus 127 ~-----~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 201 (231)
. ...++|+ .++..++++++|+|||||+|++.+....... . ...... ......+.+..
T Consensus 134 ~D~~~~~~~~~~~--~~~~~~~~e~~rvLkPGG~l~f~~~~~~~~~----~--~~~~~~----------~~~~~~~~~~~ 195 (236)
T 3orh_A 134 YDTYPLSEETWHT--HQFNFIKNHAFRLLKPGGVLTYCNLTSWGEL----M--KSKYSD----------ITIMFEETQVP 195 (236)
T ss_dssp ECCCCCBGGGTTT--HHHHHHHHTHHHHEEEEEEEEECCHHHHHHH----T--TTTCSC----------HHHHHHHHTHH
T ss_pred Eeeeecccchhhh--cchhhhhhhhhheeCCCCEEEEEecCCchhh----h--hhhhhh----------hhhhhHHHHHH
Confidence 5 3345566 6788999999999999999987532211100 0 000000 00012345667
Q ss_pred HHHHcCceEEEEEEEeeee
Q 045799 202 LFLEAGFSTVDINIHLKQI 220 (231)
Q Consensus 202 ~l~~~Gf~~~~~~~~~~~~ 220 (231)
.|.++||+++.++.....+
T Consensus 196 ~L~eaGF~~~~i~~~~~~l 214 (236)
T 3orh_A 196 ALLEAGFRRENIRTEVMAL 214 (236)
T ss_dssp HHHHHTCCGGGEEEEEEEC
T ss_pred HHHHcCCeEEEEEEEeecc
Confidence 7888999987766544433
No 89
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.50 E-value=1.9e-14 Score=116.73 Aligned_cols=135 Identities=19% Similarity=0.261 Sum_probs=86.9
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc----------------CCCCCCCeeEEEEeeeeecc
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS----------------RNVNPSSVDVVTLIFMLSAV 134 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~----------------~~~~~~~fD~ii~~~~l~~~ 134 (231)
.+..+|||||||+|.++..++... . +.+++++|+ +.++. .+++ .||+|++.+++||+
T Consensus 187 ~~~~~vlDvG~G~G~~~~~l~~~~--p--~~~~~~~D~-~~~~~~a~~~~~v~~~~~d~~~~~p--~~D~v~~~~~lh~~ 259 (352)
T 1fp2_A 187 DGLESIVDVGGGTGTTAKIICETF--P--KLKCIVFDR-PQVVENLSGSNNLTYVGGDMFTSIP--NADAVLLKYILHNW 259 (352)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHC--T--TCEEEEEEC-HHHHTTCCCBTTEEEEECCTTTCCC--CCSEEEEESCGGGS
T ss_pred ccCceEEEeCCCccHHHHHHHHHC--C--CCeEEEeeC-HHHHhhcccCCCcEEEeccccCCCC--CccEEEeehhhccC
Confidence 456899999999999999887321 1 224455554 33221 1223 39999999999999
Q ss_pred CCCCHHHHHHHHHHhcCC---CeEEEEEeccCCchhhhh-hhccccccccceEEeCCCeEEEeeCHHHHHHHHHHcCceE
Q 045799 135 SPKKMPLILQNIKAVLKP---DGYILVCDYAIGDFAQVK-LLDRNQMIGDSFYVRGDGTCSFYFSEDFLSTLFLEAGFST 210 (231)
Q Consensus 135 ~~~~~~~~l~~~~~~Lk~---gG~l~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~ 210 (231)
++++...+++++++.|+| ||++++.++..++..... ................ ...++.++|.++|+++||++
T Consensus 260 ~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~----g~~~t~~e~~~ll~~aGf~~ 335 (352)
T 1fp2_A 260 TDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMACLN----GKERNEEEWKKLFIEAGFQH 335 (352)
T ss_dssp CHHHHHHHHHHHHHHHSGGGCCCEEEEEECEECTTTSCHHHHHHHHHHHHHGGGGT----CCCEEHHHHHHHHHHTTCCE
T ss_pred CHHHHHHHHHHHHHhCCCCCCCcEEEEEEeecCCCCCccchhhhHhhccHHHHhcc----CCCCCHHHHHHHHHHCCCCe
Confidence 544444999999999999 999999886654322100 0000000000000000 12358899999999999999
Q ss_pred EEEEEE
Q 045799 211 VDINIH 216 (231)
Q Consensus 211 ~~~~~~ 216 (231)
+++...
T Consensus 336 ~~~~~~ 341 (352)
T 1fp2_A 336 YKISPL 341 (352)
T ss_dssp EEEEEE
T ss_pred eEEEec
Confidence 987664
No 90
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.49 E-value=9.2e-15 Score=119.52 Aligned_cols=136 Identities=15% Similarity=0.221 Sum_probs=85.9
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc----------------CCCCCCCeeEEEEeeeeecc
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS----------------RNVNPSSVDVVTLIFMLSAV 134 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~----------------~~~~~~~fD~ii~~~~l~~~ 134 (231)
.+..+|||||||+|.++..++.... .+.++++|+ +.++. .+++. ||+|++.+++||+
T Consensus 208 ~~~~~vLDvG~G~G~~~~~l~~~~~----~~~~~~~D~-~~~~~~a~~~~~v~~~~~d~~~~~~~--~D~v~~~~~lh~~ 280 (372)
T 1fp1_D 208 EGISTLVDVGGGSGRNLELIISKYP----LIKGINFDL-PQVIENAPPLSGIEHVGGDMFASVPQ--GDAMILKAVCHNW 280 (372)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCT----TCEEEEEEC-HHHHTTCCCCTTEEEEECCTTTCCCC--EEEEEEESSGGGS
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHCC----CCeEEEeCh-HHHHHhhhhcCCCEEEeCCcccCCCC--CCEEEEecccccC
Confidence 4568999999999999999873321 223344443 22211 12332 9999999999999
Q ss_pred CCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhc-cccccccceEEeCCCeEEEeeCHHHHHHHHHHcCceEEEE
Q 045799 135 SPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLD-RNQMIGDSFYVRGDGTCSFYFSEDFLSTLFLEAGFSTVDI 213 (231)
Q Consensus 135 ~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~ 213 (231)
++++...+++++++.|+|||.+++.++..++........ .............. ...++.++|.++|+++||+++++
T Consensus 281 ~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~---~~~~t~~e~~~ll~~aGf~~~~~ 357 (372)
T 1fp1_D 281 SDEKCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEESKLVSTLDNLMFITVG---GRERTEKQYEKLSKLSGFSKFQV 357 (372)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEEEEEEEECSSCCSSHHHHHHHHHHHHHHHHHS---CCCEEHHHHHHHHHHTTCSEEEE
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCccchHHHHHHHhhHHHHhccC---CccCCHHHHHHHHHHCCCceEEE
Confidence 544444999999999999999999876554321100000 00000000000000 12358999999999999999988
Q ss_pred EEE
Q 045799 214 NIH 216 (231)
Q Consensus 214 ~~~ 216 (231)
...
T Consensus 358 ~~~ 360 (372)
T 1fp1_D 358 ACR 360 (372)
T ss_dssp EEE
T ss_pred EEc
Confidence 763
No 91
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.49 E-value=4.7e-14 Score=114.44 Aligned_cols=136 Identities=21% Similarity=0.220 Sum_probs=90.6
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCcc----------------------ccccceeeeeecCCcccccCCCCCCCeeEEEEe
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSE----------------------FREERVNAFVCNVVNDDLSRNVNPSSVDVVTLI 128 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~----------------------~~~~~~~~~~~D~~~~~~~~~~~~~~fD~ii~~ 128 (231)
....+|||||||+|.++..++.... ....+++++..|+.+. + ...+|++++.
T Consensus 178 ~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dlp~v~~~a~~~~~~~~~~rv~~~~gD~~~~----~--~~~~D~~~~~ 251 (353)
T 4a6d_A 178 SVFPLMCDLGGGAGALAKECMSLYPGCKITVFDIPEVVWTAKQHFSFQEEEQIDFQEGDFFKD----P--LPEADLYILA 251 (353)
T ss_dssp GGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEECHHHHHHHHHHSCC--CCSEEEEESCTTTS----C--CCCCSEEEEE
T ss_pred ccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccCHHHHHHHHHhhhhcccCceeeecCccccC----C--CCCceEEEee
Confidence 4567999999999999999982110 0123456666665432 2 2357999999
Q ss_pred eeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeEEEeeCHHHHHHHHHHcCc
Q 045799 129 FMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYFSEDFLSTLFLEAGF 208 (231)
Q Consensus 129 ~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf 208 (231)
.+||++++++...+|+++++.|+|||.++|.+...++......... ...-.+.....+ .-++.++|.++|+++||
T Consensus 252 ~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~~~--~~dl~ml~~~~g---~ert~~e~~~ll~~AGf 326 (353)
T 4a6d_A 252 RVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQ--LYSLNMLVQTEG---QERTPTHYHMLLSSAGF 326 (353)
T ss_dssp SSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHHHH--HHHHHHHHSSSC---CCCCHHHHHHHHHHHTC
T ss_pred eecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHHHH--HHHHHHHHhCCC---cCCCHHHHHHHHHHCCC
Confidence 9999997767789999999999999999999876543221100000 000000000011 12589999999999999
Q ss_pred eEEEEEEEe
Q 045799 209 STVDINIHL 217 (231)
Q Consensus 209 ~~~~~~~~~ 217 (231)
+++++...+
T Consensus 327 ~~v~v~~~~ 335 (353)
T 4a6d_A 327 RDFQFKKTG 335 (353)
T ss_dssp EEEEEECCS
T ss_pred ceEEEEEcC
Confidence 999886543
No 92
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.48 E-value=9e-14 Score=111.02 Aligned_cols=147 Identities=15% Similarity=0.175 Sum_probs=88.5
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccc-----------------------------cccceeeeeecCCcccccCCCC--C
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEF-----------------------------REERVNAFVCNVVNDDLSRNVN--P 119 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~-----------------------------~~~~~~~~~~D~~~~~~~~~~~--~ 119 (231)
.++.+|||+|||+|.++..++..... ...++.+...|+....+..+++ +
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 112 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQ 112 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTT
T ss_pred CCCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCC
Confidence 46789999999999999988742100 0002334444443322111232 4
Q ss_pred CCeeEEEEeeeeecc--CCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccc----------------
Q 045799 120 SSVDVVTLIFMLSAV--SPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDS---------------- 181 (231)
Q Consensus 120 ~~fD~ii~~~~l~~~--~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~---------------- 181 (231)
++||+|++.+++||+ +.++...++++++++|+|||.+++..+....................
T Consensus 113 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~ 192 (313)
T 3bgv_A 113 MCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPNSFELIRRLEASETESFGNEIYTVKFQKKGDYPLFG 192 (313)
T ss_dssp CCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEECHHHHHHHHTTSSSSEEECSSEEEEESCSSCCCSSC
T ss_pred CCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCChHHHHHHHHhhccCccCCeeEEEEeCCCCCCCCcc
Confidence 589999999999987 33567899999999999999999987655322110000000000000
Q ss_pred ----eEE-eCCCeEEEeeCHHHHHHHHHHcCceEEEEEEEe
Q 045799 182 ----FYV-RGDGTCSFYFSEDFLSTLFLEAGFSTVDINIHL 217 (231)
Q Consensus 182 ----~~~-~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~~~~ 217 (231)
+.. .........++.+++.+++++.||+++....+.
T Consensus 193 ~~~~f~l~~~~~~~~~~~~~~~~~~l~~~~G~~~v~~~~f~ 233 (313)
T 3bgv_A 193 CKYDFNLEGVVDVPEFLVYFPLLNEMAKKYNMKLVYKKTFL 233 (313)
T ss_dssp CEEEEEEC---CCEEECCCHHHHHHHGGGGTEEEEEEEEHH
T ss_pred ceEEEEECCcccCcceEEcHHHHHHHHHHcCcEEEEecCHH
Confidence 000 001112345788899999999999999976543
No 93
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.48 E-value=3.4e-15 Score=118.12 Aligned_cols=90 Identities=16% Similarity=0.294 Sum_probs=58.0
Q ss_pred CCCCeeEEEEeeeeecc----CCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeEEEe
Q 045799 118 NPSSVDVVTLIFMLSAV----SPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTCSFY 193 (231)
Q Consensus 118 ~~~~fD~ii~~~~l~~~----~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (231)
.+++||+|++..+++|+ +++++..++++++++|+|||++++........... ......+..++. ...
T Consensus 174 ~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~~~~~LkpGG~lil~~~~~~~y~~~--~~~~~~~~~~~~-------~~~ 244 (292)
T 3g07_A 174 QTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRRIYRHLRPGGILVLEPQPWSSYGKR--KTLTETIYKNYY-------RIQ 244 (292)
T ss_dssp CCCCEEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCHHHHHTT--TTSCHHHHHHHH-------HCC
T ss_pred cCCCcCEEEEChHHHHhhhcCCHHHHHHHHHHHHHHhCCCcEEEEecCCchhhhhh--hcccHHHHhhhh-------cEE
Confidence 56899999999999877 34488999999999999999999864322211100 000000111110 012
Q ss_pred eCHHHHHHHHHH--cCceEEEEEEE
Q 045799 194 FSEDFLSTLFLE--AGFSTVDINIH 216 (231)
Q Consensus 194 ~~~~~l~~~l~~--~Gf~~~~~~~~ 216 (231)
+.++++.++|.+ +||+.+++...
T Consensus 245 ~~p~~~~~~L~~~~~GF~~~~~~~~ 269 (292)
T 3g07_A 245 LKPEQFSSYLTSPDVGFSSYELVAT 269 (292)
T ss_dssp CCGGGHHHHHTSTTTCCCEEEEC--
T ss_pred EcHHHHHHHHHhcCCCceEEEEecc
Confidence 456889999998 99988776543
No 94
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.46 E-value=6.8e-13 Score=96.57 Aligned_cols=109 Identities=16% Similarity=0.141 Sum_probs=82.6
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc-------------CCCCCCCeeEEEEeeeeeccCCC
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS-------------RNVNPSSVDVVTLIFMLSAVSPK 137 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~-------------~~~~~~~fD~ii~~~~l~~~~~~ 137 (231)
.++.+|||+|||+|.++..++... +++++|+++.++. .++++++||+|+++..+++.++.
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~~-------~v~gvD~s~~~~~~~~~~~~~~~d~~~~~~~~~fD~i~~n~~~~~~~~~ 94 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKRN-------TVVSTDLNIRALESHRGGNLVRADLLCSINQESVDVVVFNPPYVPDTDD 94 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTTS-------EEEEEESCHHHHHTCSSSCEEECSTTTTBCGGGCSEEEECCCCBTTCCC
T ss_pred CCCCeEEEeccCccHHHHHHHhcC-------cEEEEECCHHHHhcccCCeEEECChhhhcccCCCCEEEECCCCccCCcc
Confidence 456799999999999999887542 6677887766542 13455899999999888866432
Q ss_pred -------CHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeEEEeeCHHHHHHHHHHcCceE
Q 045799 138 -------KMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYFSEDFLSTLFLEAGFST 210 (231)
Q Consensus 138 -------~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~ 210 (231)
+...++.++.+.| |||.+++..... ...+++.++++++||++
T Consensus 95 ~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~------------------------------~~~~~l~~~l~~~gf~~ 143 (170)
T 3q87_B 95 PIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEA------------------------------NRPKEVLARLEERGYGT 143 (170)
T ss_dssp TTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGG------------------------------GCHHHHHHHHHHTTCEE
T ss_pred ccccCCcchHHHHHHHHhhC-CCCEEEEEEecC------------------------------CCHHHHHHHHHHCCCcE
Confidence 3467899999999 999999874221 24578999999999998
Q ss_pred EEEEEEe
Q 045799 211 VDINIHL 217 (231)
Q Consensus 211 ~~~~~~~ 217 (231)
+.+....
T Consensus 144 ~~~~~~~ 150 (170)
T 3q87_B 144 RILKVRK 150 (170)
T ss_dssp EEEEEEE
T ss_pred EEEEeec
Confidence 8876543
No 95
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.46 E-value=2.8e-14 Score=113.20 Aligned_cols=86 Identities=19% Similarity=0.321 Sum_probs=64.7
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc-------------------------CCCCC------
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS-------------------------RNVNP------ 119 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~-------------------------~~~~~------ 119 (231)
.++.+|||||||+|.++..++.... ...+++++|+++.++. .++++
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~---~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~ 111 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELK---PFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDK 111 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSS---CCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTS
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCC---CCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccC
Confidence 5678999999999999999983110 1234555555543321 12334
Q ss_pred CCeeEEEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEecc
Q 045799 120 SSVDVVTLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYA 162 (231)
Q Consensus 120 ~~fD~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~ 162 (231)
++||+|++..++||+ ++..+++++.++|+|||.+++.++.
T Consensus 112 ~~fD~V~~~~~l~~~---~~~~~l~~~~~~LkpgG~l~i~~~~ 151 (299)
T 3g5t_A 112 QKIDMITAVECAHWF---DFEKFQRSAYANLRKDGTIAIWGYA 151 (299)
T ss_dssp SCEEEEEEESCGGGS---CHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred CCeeEEeHhhHHHHh---CHHHHHHHHHHhcCCCcEEEEEecC
Confidence 799999999999999 7899999999999999999985443
No 96
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.45 E-value=2.5e-13 Score=106.34 Aligned_cols=128 Identities=12% Similarity=0.206 Sum_probs=84.6
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC----------------------CCCCCCeeEEEEe
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR----------------------NVNPSSVDVVTLI 128 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~----------------------~~~~~~fD~ii~~ 128 (231)
.++.+|||||||||.++..++... ..+++++|++..|+.. .++..+||+|++.
T Consensus 84 ~~g~~vLDiGcGTG~~t~~L~~~g-----a~~V~aVDvs~~mL~~a~r~~~rv~~~~~~ni~~l~~~~l~~~~fD~v~~d 158 (291)
T 3hp7_A 84 VEDMITIDIGASTGGFTDVMLQNG-----AKLVYAVDVGTNQLVWKLRQDDRVRSMEQYNFRYAEPVDFTEGLPSFASID 158 (291)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTT-----CSEEEEECSSSSCSCHHHHTCTTEEEECSCCGGGCCGGGCTTCCCSEEEEC
T ss_pred ccccEEEecCCCccHHHHHHHhCC-----CCEEEEEECCHHHHHHHHHhCcccceecccCceecchhhCCCCCCCEEEEE
Confidence 467899999999999998887541 1267888988877632 1233459999998
Q ss_pred eeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeEEEeeCHHHHHHHHHHcCc
Q 045799 129 FMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYFSEDFLSTLFLEAGF 208 (231)
Q Consensus 129 ~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf 208 (231)
.+++++ ..++.+++++|+|||.+++... +.+... ...+... -...+.. .+.+..+++.+++.++||
T Consensus 159 ~sf~sl-----~~vL~e~~rvLkpGG~lv~lvk--Pqfe~~-----~~~~~~~-G~vrd~~-~~~~~~~~v~~~~~~~Gf 224 (291)
T 3hp7_A 159 VSFISL-----NLILPALAKILVDGGQVVALVK--PQFEAG-----REQIGKN-GIVRESS-IHEKVLETVTAFAVDYGF 224 (291)
T ss_dssp CSSSCG-----GGTHHHHHHHSCTTCEEEEEEC--GGGTSC-----GGGCC-C-CCCCCHH-HHHHHHHHHHHHHHHTTE
T ss_pred eeHhhH-----HHHHHHHHHHcCcCCEEEEEEC--cccccC-----hhhcCCC-CccCCHH-HHHHHHHHHHHHHHHCCC
Confidence 777654 6699999999999999988631 111100 0000000 0000000 123577889999999999
Q ss_pred eEEEEEEEe
Q 045799 209 STVDINIHL 217 (231)
Q Consensus 209 ~~~~~~~~~ 217 (231)
.+..+...+
T Consensus 225 ~v~~~~~sp 233 (291)
T 3hp7_A 225 SVKGLDFSP 233 (291)
T ss_dssp EEEEEEECS
T ss_pred EEEEEEECC
Confidence 999876643
No 97
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.42 E-value=2.9e-13 Score=103.07 Aligned_cols=105 Identities=12% Similarity=0.131 Sum_probs=77.3
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc-------------------CCCC-CCCeeEEEEeee
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS-------------------RNVN-PSSVDVVTLIFM 130 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~-------------------~~~~-~~~fD~ii~~~~ 130 (231)
.++.+|||||||+|.++..++.. +.+++++|+++.++. .+++ +++||+|++.
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~-- 118 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQ------AARWAAYDFSPELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSR-- 118 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGG------SSEEEEEESCHHHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEE--
T ss_pred CCCCeEEEeCCCCCHHHHHHHHc------CCEEEEEECCHHHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeC--
Confidence 56789999999999999988744 235566666554321 1345 7899999986
Q ss_pred eeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeEEEeeCHHHHHHHHHHcCceE
Q 045799 131 LSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYFSEDFLSTLFLEAGFST 210 (231)
Q Consensus 131 l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~ 210 (231)
.++..+++++.++|||||.++.. ....+..++.+.+.++||++
T Consensus 119 ------~~~~~~l~~~~~~LkpgG~l~~~-------------------------------~~~~~~~~~~~~l~~~Gf~~ 161 (226)
T 3m33_A 119 ------RGPTSVILRLPELAAPDAHFLYV-------------------------------GPRLNVPEVPERLAAVGWDI 161 (226)
T ss_dssp ------SCCSGGGGGHHHHEEEEEEEEEE-------------------------------ESSSCCTHHHHHHHHTTCEE
T ss_pred ------CCHHHHHHHHHHHcCCCcEEEEe-------------------------------CCcCCHHHHHHHHHHCCCeE
Confidence 24567889999999999999811 01234568899999999999
Q ss_pred EEEEEEeeee
Q 045799 211 VDINIHLKQI 220 (231)
Q Consensus 211 ~~~~~~~~~~ 220 (231)
+.+.......
T Consensus 162 ~~~~~~~~~~ 171 (226)
T 3m33_A 162 VAEDHVSVLA 171 (226)
T ss_dssp EEEEEEEEEE
T ss_pred EEEEeeeecc
Confidence 8887665443
No 98
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.41 E-value=5.5e-13 Score=101.22 Aligned_cols=120 Identities=13% Similarity=0.116 Sum_probs=77.7
Q ss_pred CCCCCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc------------------------CCCCCCCee
Q 045799 68 CPNGNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS------------------------RNVNPSSVD 123 (231)
Q Consensus 68 ~~~~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~------------------------~~~~~~~fD 123 (231)
...+++.+|||+|||+|.++..++.... ..-.++++|+++.++. .+...+++|
T Consensus 73 l~ikpG~~VldlG~G~G~~~~~la~~VG---~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~~~~~vD 149 (233)
T 4df3_A 73 LPVKEGDRILYLGIASGTTASHMSDIIG---PRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLVEGVD 149 (233)
T ss_dssp CCCCTTCEEEEETCTTSHHHHHHHHHHC---TTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGTTTCCCEE
T ss_pred cCCCCCCEEEEecCcCCHHHHHHHHHhC---CCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccccccccceEE
Confidence 4568999999999999999999982211 0113445555544432 144567899
Q ss_pred EEEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeEEEeeCHHHHHHHH
Q 045799 124 VVTLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYFSEDFLSTLF 203 (231)
Q Consensus 124 ~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 203 (231)
+|++. +.|- ++...++.++++.|||||.+++........... .. --..++..+.|
T Consensus 150 vVf~d--~~~~--~~~~~~l~~~~r~LKpGG~lvI~ik~r~~d~~~----p~-----------------~~~~~~ev~~L 204 (233)
T 4df3_A 150 GLYAD--VAQP--EQAAIVVRNARFFLRDGGYMLMAIKARSIDVTT----EP-----------------SEVYKREIKTL 204 (233)
T ss_dssp EEEEC--CCCT--THHHHHHHHHHHHEEEEEEEEEEEECCHHHHHT----CC-----------------CHHHHHHHHHH
T ss_pred EEEEe--ccCC--hhHHHHHHHHHHhccCCCEEEEEEecccCCCCC----Ch-----------------HHHHHHHHHHH
Confidence 98863 3333 677889999999999999999874322211100 00 01123456778
Q ss_pred HHcCceEEEEEE
Q 045799 204 LEAGFSTVDINI 215 (231)
Q Consensus 204 ~~~Gf~~~~~~~ 215 (231)
+++||++++...
T Consensus 205 ~~~GF~l~e~i~ 216 (233)
T 4df3_A 205 MDGGLEIKDVVH 216 (233)
T ss_dssp HHTTCCEEEEEE
T ss_pred HHCCCEEEEEEc
Confidence 899999988654
No 99
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.41 E-value=7e-13 Score=100.27 Aligned_cols=131 Identities=16% Similarity=0.210 Sum_probs=81.3
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc---------------------------CCCCCCCee
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS---------------------------RNVNPSSVD 123 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~---------------------------~~~~~~~fD 123 (231)
.++.+|||||||+|.++..++... ...+++++|+++.++. .++++++ |
T Consensus 26 ~~~~~vLDiGcG~G~~~~~la~~~----p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~-d 100 (218)
T 3mq2_A 26 QYDDVVLDVGTGDGKHPYKVARQN----PSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLSGV-G 100 (218)
T ss_dssp TSSEEEEEESCTTCHHHHHHHHHC----TTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCCCE-E
T ss_pred cCCCEEEEecCCCCHHHHHHHHHC----CCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCCCC-C
Confidence 567899999999999999988431 1346677777765332 1334444 6
Q ss_pred EEEEee---ee--eccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeEEEeeCHHH
Q 045799 124 VVTLIF---ML--SAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYFSEDF 198 (231)
Q Consensus 124 ~ii~~~---~l--~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (231)
.|++.. .+ +|+ .++..++++++++|||||.+++.......... ....... ......+..+.
T Consensus 101 ~v~~~~~~~~~~~~~~--~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~------~~~~~~~------~~~~~~~~~~~ 166 (218)
T 3mq2_A 101 ELHVLMPWGSLLRGVL--GSSPEMLRGMAAVCRPGASFLVALNLHAWRPS------VPEVGEH------PEPTPDSADEW 166 (218)
T ss_dssp EEEEESCCHHHHHHHH--TSSSHHHHHHHHTEEEEEEEEEEEEGGGBTTB------CGGGTTC------CCCCHHHHHHH
T ss_pred EEEEEccchhhhhhhh--ccHHHHHHHHHHHcCCCcEEEEEecccccccc------ccccccC------CccchHHHHHH
Confidence 666332 22 266 56689999999999999999985322111100 0000000 00011123455
Q ss_pred HHHHHHHcCceEEEEEEEeeee
Q 045799 199 LSTLFLEAGFSTVDINIHLKQI 220 (231)
Q Consensus 199 l~~~l~~~Gf~~~~~~~~~~~~ 220 (231)
+..++.++||++.++.......
T Consensus 167 l~~~l~~aGf~i~~~~~~~~~~ 188 (218)
T 3mq2_A 167 LAPRYAEAGWKLADCRYLEPEE 188 (218)
T ss_dssp HHHHHHHTTEEEEEEEEECHHH
T ss_pred HHHHHHHcCCCceeeeccchhh
Confidence 8889999999999988765443
No 100
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.40 E-value=8.6e-14 Score=106.67 Aligned_cols=87 Identities=16% Similarity=0.254 Sum_probs=62.6
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc------------------------CCCCCCCeeEEE
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS------------------------RNVNPSSVDVVT 126 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~------------------------~~~~~~~fD~ii 126 (231)
.++.+|||||||+|.++..++... ..+++++|+++.++. .++++++||+|+
T Consensus 59 ~~~~~vLDiGcGtG~~~~~l~~~~-----~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~ 133 (236)
T 1zx0_A 59 SKGGRVLEVGFGMAIAASKVQEAP-----IDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGIL 133 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHHTSC-----EEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEE
T ss_pred CCCCeEEEEeccCCHHHHHHHhcC-----CCeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccCCCceEEEE
Confidence 567899999999999998886321 125567777665531 156778999999
Q ss_pred E-eeee--eccCCCCHHHHHHHHHHhcCCCeEEEEEecc
Q 045799 127 L-IFML--SAVSPKKMPLILQNIKAVLKPDGYILVCDYA 162 (231)
Q Consensus 127 ~-~~~l--~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~ 162 (231)
+ .+.+ +.....+...++++++++|||||++++.+..
T Consensus 134 ~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~ 172 (236)
T 1zx0_A 134 YDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLT 172 (236)
T ss_dssp ECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHH
T ss_pred ECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEecC
Confidence 9 5554 1221234557899999999999999987544
No 101
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.39 E-value=1.1e-12 Score=102.69 Aligned_cols=128 Identities=15% Similarity=0.152 Sum_probs=82.2
Q ss_pred CCCeEEEEcCCC---CcchHHHhcCccccccceeeeeecCCcccccC--------------------------------C
Q 045799 72 NPKVVLEVGCGA---GNTIFPLVSHSEFREERVNAFVCNVVNDDLSR--------------------------------N 116 (231)
Q Consensus 72 ~~~~iLdvGcG~---G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~--------------------------------~ 116 (231)
...+|||||||+ |.++..++... .+.+++++|+++.++.. .
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~----p~~~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 152 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVN----PDARVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPEYILNHPDVRRM 152 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHC----TTCEEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHHHHHH
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhC----CCCEEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCchhhhccchhhcc
Confidence 347999999999 97765443110 02244555555443210 1
Q ss_pred CCCCCeeEEEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeEEEeeCH
Q 045799 117 VNPSSVDVVTLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYFSE 196 (231)
Q Consensus 117 ~~~~~fD~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (231)
+...+||+|++..++||++++++..+++++++.|+|||++++.++.... ... .. .+...+..... ...+++.
T Consensus 153 ~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~~~-~~~-~~----~~~~~~~~~~~--~~~~~s~ 224 (274)
T 2qe6_A 153 IDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVDTG-LPA-QQ----KLARITRENLG--EGWARTP 224 (274)
T ss_dssp CCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBCSS-CHH-HH----HHHHHHHHHHS--CCCCBCH
T ss_pred CCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecCcc-hHH-HH----HHHHHHHhcCC--CCccCCH
Confidence 2224899999999999997667999999999999999999999876532 100 00 00000000000 1234799
Q ss_pred HHHHHHHHHcCceEEEE
Q 045799 197 DFLSTLFLEAGFSTVDI 213 (231)
Q Consensus 197 ~~l~~~l~~~Gf~~~~~ 213 (231)
+++.++| .||++++.
T Consensus 225 ~ei~~~l--~G~~l~~~ 239 (274)
T 2qe6_A 225 EEIERQF--GDFELVEP 239 (274)
T ss_dssp HHHHHTT--TTCEECTT
T ss_pred HHHHHHh--CCCeEccC
Confidence 9999999 59988863
No 102
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.39 E-value=1.2e-13 Score=112.39 Aligned_cols=136 Identities=18% Similarity=0.211 Sum_probs=85.2
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc----------------CCCCCCCeeEEEEeeeeecc
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS----------------RNVNPSSVDVVTLIFMLSAV 134 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~----------------~~~~~~~fD~ii~~~~l~~~ 134 (231)
.+..+|||||||+|.++..++.... .++++++|+. .++. .+++ +||+|++.+++||+
T Consensus 192 ~~~~~vlDvG~G~G~~~~~l~~~~p----~~~~~~~D~~-~~~~~a~~~~~v~~~~~d~~~~~~--~~D~v~~~~vlh~~ 264 (358)
T 1zg3_A 192 EGLESLVDVGGGTGGVTKLIHEIFP----HLKCTVFDQP-QVVGNLTGNENLNFVGGDMFKSIP--SADAVLLKWVLHDW 264 (358)
T ss_dssp HTCSEEEEETCTTSHHHHHHHHHCT----TSEEEEEECH-HHHSSCCCCSSEEEEECCTTTCCC--CCSEEEEESCGGGS
T ss_pred cCCCEEEEECCCcCHHHHHHHHHCC----CCeEEEeccH-HHHhhcccCCCcEEEeCccCCCCC--CceEEEEcccccCC
Confidence 3457999999999999999873211 1233333431 1111 1223 49999999999999
Q ss_pred CCCCHHHHHHHHHHhcCC---CeEEEEEeccCCchhhhh-hhccccccccceEEeCCCeEEEeeCHHHHHHHHHHcCceE
Q 045799 135 SPKKMPLILQNIKAVLKP---DGYILVCDYAIGDFAQVK-LLDRNQMIGDSFYVRGDGTCSFYFSEDFLSTLFLEAGFST 210 (231)
Q Consensus 135 ~~~~~~~~l~~~~~~Lk~---gG~l~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~ 210 (231)
++++...+++++++.|+| ||.+++.++..++..... ...........+..... ...++.++|.++|+++||++
T Consensus 265 ~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~---g~~~t~~e~~~ll~~aGf~~ 341 (358)
T 1zg3_A 265 NDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYDLVMLTMFL---GKERTKQEWEKLIYDAGFSS 341 (358)
T ss_dssp CHHHHHHHHHHHHHHTGGGGGGCEEEEEECEECTTCSCHHHHHHHHHHHHHHHHHHS---CCCEEHHHHHHHHHHTTCCE
T ss_pred CHHHHHHHHHHHHHhCCCCCCCcEEEEEEeccCCCCccchhhhHHHhhCHHHhccCC---CCCCCHHHHHHHHHHcCCCe
Confidence 544455999999999999 999999886654321100 00000000000000000 12368999999999999999
Q ss_pred EEEEEE
Q 045799 211 VDINIH 216 (231)
Q Consensus 211 ~~~~~~ 216 (231)
+++...
T Consensus 342 ~~~~~~ 347 (358)
T 1zg3_A 342 YKITPI 347 (358)
T ss_dssp EEEEEE
T ss_pred eEEEec
Confidence 987663
No 103
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.39 E-value=4.5e-12 Score=97.35 Aligned_cols=108 Identities=16% Similarity=0.206 Sum_probs=75.9
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC-----------------------CCC---CCCeeE
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR-----------------------NVN---PSSVDV 124 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~-----------------------~~~---~~~fD~ 124 (231)
.++.+|||||||+|..+..++... ...+++++|+++.++.. ++. +++||+
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~----~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~ 144 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICF----PHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDI 144 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHC----TTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhC----CCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccE
Confidence 467899999999999998887311 12356667766544311 221 578999
Q ss_pred EEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeEEEeeCHHHHHHHHH
Q 045799 125 VTLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYFSEDFLSTLFL 204 (231)
Q Consensus 125 ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 204 (231)
|++.. + .++..+++.+.++|+|||.+++....... ....++.+.++
T Consensus 145 V~~~~----~--~~~~~~l~~~~~~LkpgG~l~~~~g~~~~----------------------------~~~~~~~~~l~ 190 (240)
T 1xdz_A 145 VTARA----V--ARLSVLSELCLPLVKKNGLFVALKAASAE----------------------------EELNAGKKAIT 190 (240)
T ss_dssp EEEEC----C--SCHHHHHHHHGGGEEEEEEEEEEECC-CH----------------------------HHHHHHHHHHH
T ss_pred EEEec----c--CCHHHHHHHHHHhcCCCCEEEEEeCCCch----------------------------HHHHHHHHHHH
Confidence 99966 3 56889999999999999999886211100 12346778889
Q ss_pred HcCceEEEEEEE
Q 045799 205 EAGFSTVDINIH 216 (231)
Q Consensus 205 ~~Gf~~~~~~~~ 216 (231)
++||+++++...
T Consensus 191 ~~g~~~~~~~~~ 202 (240)
T 1xdz_A 191 TLGGELENIHSF 202 (240)
T ss_dssp HTTEEEEEEEEE
T ss_pred HcCCeEeEEEEE
Confidence 999999887643
No 104
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.38 E-value=7.8e-13 Score=100.97 Aligned_cols=128 Identities=14% Similarity=0.195 Sum_probs=81.3
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC----------------------CCCCCCeeEEEEe
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR----------------------NVNPSSVDVVTLI 128 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~----------------------~~~~~~fD~ii~~ 128 (231)
.++.+|||||||+|.++..++... ..+++++|+++.|+.. .++...||.+.+.
T Consensus 36 ~~g~~VLDiGcGtG~~t~~la~~g-----~~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~D 110 (232)
T 3opn_A 36 INGKTCLDIGSSTGGFTDVMLQNG-----AKLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQGRPSFTSID 110 (232)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTT-----CSEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCSCCCSEEEEC
T ss_pred CCCCEEEEEccCCCHHHHHHHhcC-----CCEEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCcCCCCEEEEE
Confidence 456799999999999999888541 1267899999887642 0111135666655
Q ss_pred eeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeEEEeeCHHHHHHHHHHcCc
Q 045799 129 FMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYFSEDFLSTLFLEAGF 208 (231)
Q Consensus 129 ~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf 208 (231)
.++.++ ..++++++++|||||.+++.. .+.+... ...+...-.. .+. .....+.+++.++++++||
T Consensus 111 ~v~~~l-----~~~l~~i~rvLkpgG~lv~~~--~p~~e~~-----~~~~~~~G~~-~d~-~~~~~~~~~l~~~l~~aGf 176 (232)
T 3opn_A 111 VSFISL-----DLILPPLYEILEKNGEVAALI--KPQFEAG-----REQVGKNGII-RDP-KVHQMTIEKVLKTATQLGF 176 (232)
T ss_dssp CSSSCG-----GGTHHHHHHHSCTTCEEEEEE--CHHHHSC-----HHHHC-CCCC-CCH-HHHHHHHHHHHHHHHHHTE
T ss_pred EEhhhH-----HHHHHHHHHhccCCCEEEEEE--CcccccC-----HHHhCcCCee-cCc-chhHHHHHHHHHHHHHCCC
Confidence 554443 679999999999999999863 1111100 0000000000 000 0123578899999999999
Q ss_pred eEEEEEEEe
Q 045799 209 STVDINIHL 217 (231)
Q Consensus 209 ~~~~~~~~~ 217 (231)
+++.+...+
T Consensus 177 ~v~~~~~~p 185 (232)
T 3opn_A 177 SVKGLTFSP 185 (232)
T ss_dssp EEEEEEECS
T ss_pred EEEEEEEcc
Confidence 999887643
No 105
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.37 E-value=7.1e-13 Score=97.65 Aligned_cols=86 Identities=15% Similarity=0.261 Sum_probs=60.2
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC------------------------CCCCCCeeEEE
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR------------------------NVNPSSVDVVT 126 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~------------------------~~~~~~fD~ii 126 (231)
.++.+|||+|||+|.++..++.. ..+++++|+++.++.. .+.+++||+|+
T Consensus 21 ~~~~~vLDiGcG~G~~~~~la~~------~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~ 94 (185)
T 3mti_A 21 DDESIVVDATMGNGNDTAFLAGL------SKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAI 94 (185)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTT------SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHh------CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEE
Confidence 67889999999999999999854 2355677766555321 13467899998
Q ss_pred Eee-eeecc------CCCCHHHHHHHHHHhcCCCeEEEEEecc
Q 045799 127 LIF-MLSAV------SPKKMPLILQNIKAVLKPDGYILVCDYA 162 (231)
Q Consensus 127 ~~~-~l~~~------~~~~~~~~l~~~~~~Lk~gG~l~i~~~~ 162 (231)
+.. .+++- .+++...+++++.++|||||.+++..+.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 137 (185)
T 3mti_A 95 FNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYY 137 (185)
T ss_dssp EEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC-
T ss_pred EeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeC
Confidence 863 22210 1144567889999999999999997654
No 106
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.37 E-value=6.9e-13 Score=99.35 Aligned_cols=105 Identities=11% Similarity=0.181 Sum_probs=78.7
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC---------------------CCCCCCeeEEEEee
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR---------------------NVNPSSVDVVTLIF 129 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~---------------------~~~~~~fD~ii~~~ 129 (231)
.++.+|||+|||+|.++..++... ..+++++|+++.++.. .+.+++||+|++..
T Consensus 59 ~~~~~vLDiG~G~G~~~~~l~~~~-----~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~fD~i~~~~ 133 (205)
T 3grz_A 59 VKPLTVADVGTGSGILAIAAHKLG-----AKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLADVDGKFDLIVANI 133 (205)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHTT-----CSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTTCCSCEEEEEEES
T ss_pred cCCCEEEEECCCCCHHHHHHHHCC-----CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccccCCCCceEEEECC
Confidence 567899999999999998877421 1255666666544321 23458999999988
Q ss_pred eeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeEEEeeCHHHHHHHHHHcCce
Q 045799 130 MLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYFSEDFLSTLFLEAGFS 209 (231)
Q Consensus 130 ~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~ 209 (231)
+++++ ..+++++.++|+|||.+++.++.. .+.+++.++++++||+
T Consensus 134 ~~~~~-----~~~l~~~~~~L~~gG~l~~~~~~~------------------------------~~~~~~~~~~~~~Gf~ 178 (205)
T 3grz_A 134 LAEIL-----LDLIPQLDSHLNEDGQVIFSGIDY------------------------------LQLPKIEQALAENSFQ 178 (205)
T ss_dssp CHHHH-----HHHGGGSGGGEEEEEEEEEEEEEG------------------------------GGHHHHHHHHHHTTEE
T ss_pred cHHHH-----HHHHHHHHHhcCCCCEEEEEecCc------------------------------ccHHHHHHHHHHcCCc
Confidence 77654 678999999999999999864322 1457889999999999
Q ss_pred EEEEEE
Q 045799 210 TVDINI 215 (231)
Q Consensus 210 ~~~~~~ 215 (231)
++++..
T Consensus 179 ~~~~~~ 184 (205)
T 3grz_A 179 IDLKMR 184 (205)
T ss_dssp EEEEEE
T ss_pred eEEeec
Confidence 988754
No 107
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.36 E-value=1e-12 Score=99.91 Aligned_cols=135 Identities=14% Similarity=0.153 Sum_probs=76.1
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCC-cccc---c--------C-------------CCCCCCeeEE
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVV-NDDL---S--------R-------------NVNPSSVDVV 125 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~-~~~~---~--------~-------------~~~~~~fD~i 125 (231)
.++.+|||||||+|.++..++... .+..++++|++ ..++ . . .++...+|.|
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~----~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~~d~v 98 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAIND----QNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFELKNIA 98 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTC----TTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGGTTCE
T ss_pred CCCCEEEEEeccCcHHHHHHHHhC----CCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhccCeE
Confidence 567899999999999999887432 24578899998 3331 0 0 1122223444
Q ss_pred EEeeeeeccC------CCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeEEEeeCHHHH
Q 045799 126 TLIFMLSAVS------PKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYFSEDFL 199 (231)
Q Consensus 126 i~~~~l~~~~------~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 199 (231)
.+..+....+ ..+...++++++++|||||.+++............+. .. ... .. ...++..+++
T Consensus 99 ~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~~~~~~~~~~~~~-----~~-~~~---~~-~~~~~~~~el 168 (225)
T 3p2e_A 99 DSISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVTTYSDSYEEAEIK-----KR-GLP---LL-SKAYFLSEQY 168 (225)
T ss_dssp EEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEECCCC-----------------------C-CHHHHHSHHH
T ss_pred EEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEEeccccchhchhh-----hc-CCC---CC-ChhhcchHHH
Confidence 4433321110 0233568999999999999999843222211100000 00 000 00 0011222359
Q ss_pred HHHHHHcCceEEEEEEEeee
Q 045799 200 STLFLEAGFSTVDINIHLKQ 219 (231)
Q Consensus 200 ~~~l~~~Gf~~~~~~~~~~~ 219 (231)
..++.++||++.........
T Consensus 169 ~~~l~~aGf~v~~~~~~~~~ 188 (225)
T 3p2e_A 169 KAELSNSGFRIDDVKELDNE 188 (225)
T ss_dssp HHHHHHHTCEEEEEEEECHH
T ss_pred HHHHHHcCCCeeeeeecCHH
Confidence 99999999999998877643
No 108
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.36 E-value=3.6e-12 Score=93.09 Aligned_cols=111 Identities=16% Similarity=0.202 Sum_probs=78.4
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc----------------------CCCCC--CCeeEEE
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS----------------------RNVNP--SSVDVVT 126 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~----------------------~~~~~--~~fD~ii 126 (231)
.++.+|||+|||+|.++..++... ...+++++|+++.++. ..++. ++||+|+
T Consensus 24 ~~~~~vldiG~G~G~~~~~l~~~~----~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~i~ 99 (178)
T 3hm2_A 24 KPHETLWDIGGGSGSIAIEWLRST----PQTTAVCFEISEERRERILSNAINLGVSDRIAVQQGAPRAFDDVPDNPDVIF 99 (178)
T ss_dssp CTTEEEEEESTTTTHHHHHHHTTS----SSEEEEEECSCHHHHHHHHHHHHTTTCTTSEEEECCTTGGGGGCCSCCSEEE
T ss_pred cCCCeEEEeCCCCCHHHHHHHHHC----CCCeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecchHhhhhccCCCCCEEE
Confidence 567899999999999999887442 1335566666543321 02222 7899999
Q ss_pred EeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeEEEeeCHHHHHHHHHHc
Q 045799 127 LIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYFSEDFLSTLFLEA 206 (231)
Q Consensus 127 ~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 206 (231)
+..++++ ..+++++.+.|+|||.+++.+... .+...+.+++++.
T Consensus 100 ~~~~~~~------~~~l~~~~~~L~~gG~l~~~~~~~------------------------------~~~~~~~~~~~~~ 143 (178)
T 3hm2_A 100 IGGGLTA------PGVFAAAWKRLPVGGRLVANAVTV------------------------------ESEQMLWALRKQF 143 (178)
T ss_dssp ECC-TTC------TTHHHHHHHTCCTTCEEEEEECSH------------------------------HHHHHHHHHHHHH
T ss_pred ECCcccH------HHHHHHHHHhcCCCCEEEEEeecc------------------------------ccHHHHHHHHHHc
Confidence 9888876 558999999999999999875332 1335677888888
Q ss_pred CceEEEEEEEeeeee
Q 045799 207 GFSTVDINIHLKQIK 221 (231)
Q Consensus 207 Gf~~~~~~~~~~~~~ 221 (231)
|+++..+......-.
T Consensus 144 ~~~~~~~~~~~~~~~ 158 (178)
T 3hm2_A 144 GGTISSFAISHEHTV 158 (178)
T ss_dssp CCEEEEEEEEEEEEC
T ss_pred CCeeEEEEeecCccc
Confidence 888888766554433
No 109
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.35 E-value=3.8e-12 Score=96.01 Aligned_cols=86 Identities=17% Similarity=0.232 Sum_probs=57.7
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccc-------------------------cCCCCCCCeeEE
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDL-------------------------SRNVNPSSVDVV 125 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~-------------------------~~~~~~~~fD~i 125 (231)
.++.+|||||||+|.++..++.... ..+++++|+++.++ ...+++++||+|
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~p----~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i 115 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQNP----DINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRL 115 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHCT----TSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEE
T ss_pred CCCCeEEEEccCcCHHHHHHHHHCC----CCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEE
Confidence 4578999999999999998873211 22344444443222 112567889999
Q ss_pred EEeeeeeccC------CCCHHHHHHHHHHhcCCCeEEEEEe
Q 045799 126 TLIFMLSAVS------PKKMPLILQNIKAVLKPDGYILVCD 160 (231)
Q Consensus 126 i~~~~l~~~~------~~~~~~~l~~~~~~Lk~gG~l~i~~ 160 (231)
++.+...+.. .-....+++++.++|+|||.+++..
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 156 (214)
T 1yzh_A 116 YLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKT 156 (214)
T ss_dssp EEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEE
T ss_pred EEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEe
Confidence 9986543221 0023679999999999999998864
No 110
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.32 E-value=1.4e-11 Score=92.19 Aligned_cols=101 Identities=13% Similarity=0.135 Sum_probs=72.6
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC----------------------CC-CCCCeeEEEE
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR----------------------NV-NPSSVDVVTL 127 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~----------------------~~-~~~~fD~ii~ 127 (231)
.++.+|||+|||+|.++..++.... ..+++++|+++.++.. .+ ..++||+|++
T Consensus 39 ~~~~~vLDiG~G~G~~~~~la~~~~----~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~ 114 (204)
T 3e05_A 39 QDDLVMWDIGAGSASVSIEASNLMP----NGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDLPDPDRVFI 114 (204)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHCT----TSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTTSCCCSEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHHCC----CCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhcCCCCCEEEE
Confidence 6778999999999999988874321 2345666665543311 11 2267999998
Q ss_pred eeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeEEEeeCHHHHHHHHHHcC
Q 045799 128 IFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYFSEDFLSTLFLEAG 207 (231)
Q Consensus 128 ~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~G 207 (231)
..+++ +...+++++.+.|+|||.+++..... -+.+++.++++++|
T Consensus 115 ~~~~~-----~~~~~l~~~~~~LkpgG~l~~~~~~~------------------------------~~~~~~~~~l~~~g 159 (204)
T 3e05_A 115 GGSGG-----MLEEIIDAVDRRLKSEGVIVLNAVTL------------------------------DTLTKAVEFLEDHG 159 (204)
T ss_dssp SCCTT-----CHHHHHHHHHHHCCTTCEEEEEECBH------------------------------HHHHHHHHHHHHTT
T ss_pred CCCCc-----CHHHHHHHHHHhcCCCeEEEEEeccc------------------------------ccHHHHHHHHHHCC
Confidence 77553 67899999999999999999864222 13467888999999
Q ss_pred ceE
Q 045799 208 FST 210 (231)
Q Consensus 208 f~~ 210 (231)
|.+
T Consensus 160 ~~~ 162 (204)
T 3e05_A 160 YMV 162 (204)
T ss_dssp CEE
T ss_pred Cce
Confidence 843
No 111
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.32 E-value=4.1e-12 Score=98.39 Aligned_cols=104 Identities=14% Similarity=0.164 Sum_probs=77.7
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC---------------------CCCCCCeeEEEEee
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR---------------------NVNPSSVDVVTLIF 129 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~---------------------~~~~~~fD~ii~~~ 129 (231)
.++.+|||+|||+|.++..++.. +.+++++|+++.++.. .+++++||+|+++.
T Consensus 119 ~~~~~VLDiGcG~G~l~~~la~~------g~~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~~~~~~fD~Vv~n~ 192 (254)
T 2nxc_A 119 RPGDKVLDLGTGSGVLAIAAEKL------GGKALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAALPFGPFDLLVANL 192 (254)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT------TCEEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHHGGGCCEEEEEEEC
T ss_pred CCCCEEEEecCCCcHHHHHHHHh------CCeEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhcCcCCCCCEEEECC
Confidence 56789999999999999887743 1256677776554311 13467899999876
Q ss_pred eeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeEEEeeCHHHHHHHHHHcCce
Q 045799 130 MLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYFSEDFLSTLFLEAGFS 209 (231)
Q Consensus 130 ~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~ 209 (231)
..++ ...++..+.++|+|||++++..... .+.+++.++++++||+
T Consensus 193 ~~~~-----~~~~l~~~~~~LkpgG~lils~~~~------------------------------~~~~~v~~~l~~~Gf~ 237 (254)
T 2nxc_A 193 YAEL-----HAALAPRYREALVPGGRALLTGILK------------------------------DRAPLVREAMAGAGFR 237 (254)
T ss_dssp CHHH-----HHHHHHHHHHHEEEEEEEEEEEEEG------------------------------GGHHHHHHHHHHTTCE
T ss_pred cHHH-----HHHHHHHHHHHcCCCCEEEEEeecc------------------------------CCHHHHHHHHHHCCCE
Confidence 5443 4679999999999999999864221 2457899999999999
Q ss_pred EEEEEE
Q 045799 210 TVDINI 215 (231)
Q Consensus 210 ~~~~~~ 215 (231)
++++..
T Consensus 238 ~~~~~~ 243 (254)
T 2nxc_A 238 PLEEAA 243 (254)
T ss_dssp EEEEEE
T ss_pred EEEEec
Confidence 988654
No 112
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.30 E-value=1.9e-13 Score=99.54 Aligned_cols=84 Identities=15% Similarity=0.318 Sum_probs=67.3
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC---------------------CCCCCCeeEEEEee
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR---------------------NVNPSSVDVVTLIF 129 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~---------------------~~~~~~fD~ii~~~ 129 (231)
.+..+|||+|||+|.++..++.... ..++..+|++..+++. ..+.++||+|++..
T Consensus 48 ~~~~~VLDlGCG~GplAl~l~~~~p----~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~~d~~~~~~~~~~DvVLa~k 123 (200)
T 3fzg_A 48 KHVSSILDFGCGFNPLALYQWNENE----KIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRFLNKESDVYKGTYDVVFLLK 123 (200)
T ss_dssp CCCSEEEEETCTTHHHHHHHHCSSC----CCEEEEECSCHHHHHHHHHHHHHSCCSSEEEEECCHHHHTTSEEEEEEEET
T ss_pred CCCCeEEEecCCCCHHHHHHHhcCC----CCEEEEEeCCHHHHHHHHHHHHhcCCCccEEEecccccCCCCCcChhhHhh
Confidence 6688999999999999999974432 3367788887776532 12467899999999
Q ss_pred eeeccCCCCHHHHHHHHHHhcCCCeEEEEEe
Q 045799 130 MLSAVSPKKMPLILQNIKAVLKPDGYILVCD 160 (231)
Q Consensus 130 ~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~ 160 (231)
++||+ ++.+..+.++.+.|+|||+++--+
T Consensus 124 ~LHlL--~~~~~al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 124 MLPVL--KQQDVNILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp CHHHH--HHTTCCHHHHHHTCEEEEEEEEEE
T ss_pred HHHhh--hhhHHHHHHHHHHhCCCCEEEEeC
Confidence 99999 677778889999999999997653
No 113
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.30 E-value=6e-12 Score=109.71 Aligned_cols=89 Identities=12% Similarity=0.262 Sum_probs=67.0
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc-----------------------------CCCCCCC
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS-----------------------------RNVNPSS 121 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~-----------------------------~~~~~~~ 121 (231)
.++.+|||||||+|.++..++.... ...+++++|++..++. .++.+++
T Consensus 720 ~~g~rVLDVGCGTG~lai~LAr~g~---p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~d~s 796 (950)
T 3htx_A 720 SSASTLVDFGCGSGSLLDSLLDYPT---SLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSRLHD 796 (950)
T ss_dssp SCCSEEEEETCSSSHHHHHHTSSCC---CCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTTSCS
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCC---CCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcccCC
Confidence 4678999999999999999874421 1135667777655432 1345689
Q ss_pred eeEEEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccC
Q 045799 122 VDVVTLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAI 163 (231)
Q Consensus 122 fD~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~ 163 (231)
||+|++..+++|+++.....+++++.++|||| .+++.+++.
T Consensus 797 FDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN~ 837 (950)
T 3htx_A 797 VDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPNY 837 (950)
T ss_dssp CCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECBG
T ss_pred eeEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecCc
Confidence 99999999999996545557999999999999 777776544
No 114
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.30 E-value=1.6e-11 Score=89.58 Aligned_cols=120 Identities=15% Similarity=0.106 Sum_probs=79.6
Q ss_pred CCCCCeEEEEcCCCCc--chHHHhc--CccccccceeeeeecCCcccccCCCCCCCeeEEEEeeeeeccCCCCHHHHHHH
Q 045799 70 NGNPKVVLEVGCGAGN--TIFPLVS--HSEFREERVNAFVCNVVNDDLSRNVNPSSVDVVTLIFMLSAVSPKKMPLILQN 145 (231)
Q Consensus 70 ~~~~~~iLdvGcG~G~--~~~~l~~--~~~~~~~~~~~~~~D~~~~~~~~~~~~~~fD~ii~~~~l~~~~~~~~~~~l~~ 145 (231)
..++.+|||||||+.. .+..++. .... ...+.+...|+..... .++++++||+|++..++||++ ++...++++
T Consensus 10 ~~~g~~vL~~~~g~v~vD~s~~ml~~a~~~~-~~~~~~~~~d~~~~~~-~~~~~~~fD~V~~~~~l~~~~-~~~~~~l~~ 86 (176)
T 2ld4_A 10 ISAGQFVAVVWDKSSPVEALKGLVDKLQALT-GNEGRVSVENIKQLLQ-SAHKESSFDIILSGLVPGSTT-LHSAEILAE 86 (176)
T ss_dssp CCTTSEEEEEECTTSCHHHHHHHHHHHHHHT-TTTSEEEEEEGGGGGG-GCCCSSCEEEEEECCSTTCCC-CCCHHHHHH
T ss_pred CCCCCEEEEecCCceeeeCCHHHHHHHHHhc-ccCcEEEEechhcCcc-ccCCCCCEeEEEECChhhhcc-cCHHHHHHH
Confidence 4788999999999854 1111111 1111 1136777888764321 123678999999999999983 346899999
Q ss_pred HHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeEEEeeCHHHHHHHHHHcCceEEEEEE
Q 045799 146 IKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYFSEDFLSTLFLEAGFSTVDINI 215 (231)
Q Consensus 146 ~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~~ 215 (231)
++++|||||++++.+...... . .. ....+.+++.++|+++|| +. +..
T Consensus 87 ~~r~LkpgG~l~~~~~~~~~~--------~----~~---------~~~~~~~~~~~~l~~aGf-i~-~~~ 133 (176)
T 2ld4_A 87 IARILRPGGCLFLKEPVETAV--------D----NN---------SKVKTASKLCSALTLSGL-VE-VKE 133 (176)
T ss_dssp HHHHEEEEEEEEEEEEEESSS--------C----SS---------SSSCCHHHHHHHHHHTTC-EE-EEE
T ss_pred HHHHCCCCEEEEEEccccccc--------c----cc---------cccCCHHHHHHHHHHCCC-cE-eec
Confidence 999999999999954321100 0 00 112478899999999999 55 444
No 115
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.29 E-value=7.1e-12 Score=95.46 Aligned_cols=111 Identities=15% Similarity=0.112 Sum_probs=75.1
Q ss_pred CCCCeEEEEcCC-CCcchHHHhcCccccccceeeeeecCCccccc-----------------------CCCCCCCeeEEE
Q 045799 71 GNPKVVLEVGCG-AGNTIFPLVSHSEFREERVNAFVCNVVNDDLS-----------------------RNVNPSSVDVVT 126 (231)
Q Consensus 71 ~~~~~iLdvGcG-~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~-----------------------~~~~~~~fD~ii 126 (231)
.++.+|||+||| +|.++..++... ..+++++|+++.++. .++++++||+|+
T Consensus 54 ~~~~~vLDlG~G~~G~~~~~la~~~-----~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~ 128 (230)
T 3evz_A 54 RGGEVALEIGTGHTAMMALMAEKFF-----NCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIF 128 (230)
T ss_dssp CSSCEEEEECCTTTCHHHHHHHHHH-----CCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEE
T ss_pred CCCCEEEEcCCCHHHHHHHHHHHhc-----CCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEE
Confidence 678999999999 999998887331 123445555443321 134568999999
Q ss_pred EeeeeeccCCC-----------------CHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCe
Q 045799 127 LIFMLSAVSPK-----------------KMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGT 189 (231)
Q Consensus 127 ~~~~l~~~~~~-----------------~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (231)
+.-.+++.+.. ....+++++.++|+|||.+++......
T Consensus 129 ~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~------------------------- 183 (230)
T 3evz_A 129 SAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKE------------------------- 183 (230)
T ss_dssp ECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCH-------------------------
T ss_pred ECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccH-------------------------
Confidence 98665544211 147899999999999999988632110
Q ss_pred EEEeeCHHHHHHHHHHcCceEEEEEE
Q 045799 190 CSFYFSEDFLSTLFLEAGFSTVDINI 215 (231)
Q Consensus 190 ~~~~~~~~~l~~~l~~~Gf~~~~~~~ 215 (231)
...+++.+++++.||++..+..
T Consensus 184 ----~~~~~~~~~l~~~g~~~~~~~~ 205 (230)
T 3evz_A 184 ----KLLNVIKERGIKLGYSVKDIKF 205 (230)
T ss_dssp ----HHHHHHHHHHHHTTCEEEEEEE
T ss_pred ----hHHHHHHHHHHHcCCceEEEEe
Confidence 1346888999999998877643
No 116
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.28 E-value=3.8e-11 Score=89.90 Aligned_cols=108 Identities=15% Similarity=0.138 Sum_probs=76.4
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC-----------------------CC-CCCCeeEEE
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR-----------------------NV-NPSSVDVVT 126 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~-----------------------~~-~~~~fD~ii 126 (231)
.++.+|||+|||+|.++..++.. ..+++++|+++.++.. .+ ...+||+|+
T Consensus 54 ~~~~~vLDlGcG~G~~~~~la~~------~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~D~v~ 127 (204)
T 3njr_A 54 RRGELLWDIGGGSGSVSVEWCLA------GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLPLPEAVF 127 (204)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSCCCSEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHc------CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCCCCCEEE
Confidence 66789999999999999888743 2244555554433210 01 224799999
Q ss_pred EeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeEEEeeCHHHHHHHHHHc
Q 045799 127 LIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYFSEDFLSTLFLEA 206 (231)
Q Consensus 127 ~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 206 (231)
+...+ +.. +++++.+.|+|||.+++..... -+..++.+.+++.
T Consensus 128 ~~~~~------~~~-~l~~~~~~LkpgG~lv~~~~~~------------------------------~~~~~~~~~l~~~ 170 (204)
T 3njr_A 128 IGGGG------SQA-LYDRLWEWLAPGTRIVANAVTL------------------------------ESETLLTQLHARH 170 (204)
T ss_dssp ECSCC------CHH-HHHHHHHHSCTTCEEEEEECSH------------------------------HHHHHHHHHHHHH
T ss_pred ECCcc------cHH-HHHHHHHhcCCCcEEEEEecCc------------------------------ccHHHHHHHHHhC
Confidence 86633 456 9999999999999999874322 1345778889999
Q ss_pred CceEEEEEEEeeeee
Q 045799 207 GFSTVDINIHLKQIK 221 (231)
Q Consensus 207 Gf~~~~~~~~~~~~~ 221 (231)
|+++..+........
T Consensus 171 g~~i~~i~~~~~~~~ 185 (204)
T 3njr_A 171 GGQLLRIDIAQAEPL 185 (204)
T ss_dssp CSEEEEEEEEEEEEE
T ss_pred CCcEEEEEeeccccc
Confidence 999999877655543
No 117
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.27 E-value=8.5e-12 Score=94.39 Aligned_cols=86 Identities=16% Similarity=0.237 Sum_probs=61.0
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC--------------------------CCCCCCeeE
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR--------------------------NVNPSSVDV 124 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~--------------------------~~~~~~fD~ 124 (231)
.++..|||||||+|..+..++.... ...++++|++..++.. .+++++||.
T Consensus 33 ~~~~~vLDiGcG~G~~~~~lA~~~p----~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~ 108 (218)
T 3dxy_A 33 REAPVTLEIGFGMGASLVAMAKDRP----EQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRM 108 (218)
T ss_dssp SCCCEEEEESCTTCHHHHHHHHHCT----TSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEE
T ss_pred CCCCeEEEEeeeChHHHHHHHHHCC----CCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChhe
Confidence 3567999999999999999884321 3356677776654421 257889999
Q ss_pred EEEeeeeeccCCCCH------HHHHHHHHHhcCCCeEEEEEe
Q 045799 125 VTLIFMLSAVSPKKM------PLILQNIKAVLKPDGYILVCD 160 (231)
Q Consensus 125 ii~~~~l~~~~~~~~------~~~l~~~~~~Lk~gG~l~i~~ 160 (231)
|++.+...+...... ..++++++++|||||.+++.+
T Consensus 109 v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~t 150 (218)
T 3dxy_A 109 VQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMAT 150 (218)
T ss_dssp EEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEe
Confidence 998754433211111 259999999999999999875
No 118
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.27 E-value=1.6e-11 Score=92.61 Aligned_cols=86 Identities=19% Similarity=0.225 Sum_probs=58.2
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC-------------------------CCCCCCeeEE
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR-------------------------NVNPSSVDVV 125 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~-------------------------~~~~~~fD~i 125 (231)
.++..|||||||+|.++..++.... ..+++++|++..++.. .+++++||.|
T Consensus 37 ~~~~~vLDiGcG~G~~~~~la~~~p----~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v 112 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQFISGMAKQNP----DINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRV 112 (213)
T ss_dssp SCCCEEEEECCTTSHHHHHHHHHCT----TSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEE
T ss_pred CCCceEEEEecCCCHHHHHHHHHCC----CCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEE
Confidence 4567899999999999999873311 2345556655443210 1467889999
Q ss_pred EEeeeeeccC------CCCHHHHHHHHHHhcCCCeEEEEEe
Q 045799 126 TLIFMLSAVS------PKKMPLILQNIKAVLKPDGYILVCD 160 (231)
Q Consensus 126 i~~~~l~~~~------~~~~~~~l~~~~~~Lk~gG~l~i~~ 160 (231)
++.+...+.. +-....+++++.++|+|||.+++..
T Consensus 113 ~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~t 153 (213)
T 2fca_A 113 YLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKT 153 (213)
T ss_dssp EEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEE
T ss_pred EEECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEe
Confidence 8765432220 0013678999999999999999863
No 119
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.27 E-value=2.5e-12 Score=100.29 Aligned_cols=41 Identities=22% Similarity=0.347 Sum_probs=36.9
Q ss_pred CCCeeEEEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEE
Q 045799 119 PSSVDVVTLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVC 159 (231)
Q Consensus 119 ~~~fD~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~ 159 (231)
.++||+|+|.++++|++++...++++++++.|+|||++++.
T Consensus 211 ~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 211 PGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp CCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred CCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 46899999999999997666689999999999999999884
No 120
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.26 E-value=5.4e-11 Score=91.78 Aligned_cols=108 Identities=13% Similarity=0.084 Sum_probs=74.7
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC-----------------------C---CCCCCeeE
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR-----------------------N---VNPSSVDV 124 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~-----------------------~---~~~~~fD~ 124 (231)
.++.+|||||||+|..+..++... ...+++++|++..++.. + ..+++||+
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~----~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~ 154 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVR----PELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYAR 154 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHC----TTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHC----CCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceE
Confidence 567899999999999998887321 12355666666544321 1 12479999
Q ss_pred EEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeEEEeeCHHHHHHHHH
Q 045799 125 VTLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYFSEDFLSTLFL 204 (231)
Q Consensus 125 ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 204 (231)
|++.. + .+...+++.+.++|||||++++........ ...++.+.++
T Consensus 155 I~s~a----~--~~~~~ll~~~~~~LkpgG~l~~~~g~~~~~----------------------------e~~~~~~~l~ 200 (249)
T 3g89_A 155 AVARA----V--APLCVLSELLLPFLEVGGAAVAMKGPRVEE----------------------------ELAPLPPALE 200 (249)
T ss_dssp EEEES----S--CCHHHHHHHHGGGEEEEEEEEEEECSCCHH----------------------------HHTTHHHHHH
T ss_pred EEECC----c--CCHHHHHHHHHHHcCCCeEEEEEeCCCcHH----------------------------HHHHHHHHHH
Confidence 99964 3 567889999999999999998863211110 1235667788
Q ss_pred HcCceEEEEEEE
Q 045799 205 EAGFSTVDINIH 216 (231)
Q Consensus 205 ~~Gf~~~~~~~~ 216 (231)
..||.++++...
T Consensus 201 ~~G~~~~~~~~~ 212 (249)
T 3g89_A 201 RLGGRLGEVLAL 212 (249)
T ss_dssp HHTEEEEEEEEE
T ss_pred HcCCeEEEEEEe
Confidence 889998887655
No 121
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.25 E-value=3.6e-12 Score=103.26 Aligned_cols=120 Identities=15% Similarity=0.161 Sum_probs=80.2
Q ss_pred hhHHHHHHhccCCcccchhhhHHhhcccccCCCCCCCCCCCeEEEEcCC------CCcchHHHhcCccccccceeeeeec
Q 045799 34 KYWDGFYKRHKNKFFKDRHYLEKDWGNYFSDDSCCPNGNPKVVLEVGCG------AGNTIFPLVSHSEFREERVNAFVCN 107 (231)
Q Consensus 34 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iLdvGcG------~G~~~~~l~~~~~~~~~~~~~~~~D 107 (231)
..|+....+|....+.+..++...+..++..+ ..++.+||||||| +|..+..++... +. +.+++++|
T Consensus 182 ~~fd~lA~~Y~tDK~~~~h~y~~~Ye~lL~~l----~~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~-fP--~a~V~GVD 254 (419)
T 3sso_A 182 PDLSELSSRYFTPKFGFLHWFTPHYDRHFRDY----RNQQVRVLEIGVGGYKHPEWGGGSLRMWKSF-FP--RGQIYGLD 254 (419)
T ss_dssp CCHHHHHHHTTCTTBSSSCBCHHHHHHHHGGG----TTSCCEEEEECCSCTTCSSCCCHHHHHHHHH-CT--TCEEEEEE
T ss_pred ccHHHHHHHhCCCcccccchHHHHHHHHHHhh----cCCCCEEEEEecCCCcCCCCCHHHHHHHHHh-CC--CCEEEEEE
Confidence 45888888877544443222323333323221 1457899999999 777777776321 11 34677888
Q ss_pred CCcccccC--------------CCC------CCCeeEEEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccC
Q 045799 108 VVNDDLSR--------------NVN------PSSVDVVTLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAI 163 (231)
Q Consensus 108 ~~~~~~~~--------------~~~------~~~fD~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~ 163 (231)
+++.+... ++. +++||+|++.. .|++ .+...++++++++|||||++++.+...
T Consensus 255 iSp~m~~~~~rI~fv~GDa~dlpf~~~l~~~d~sFDlVisdg-sH~~--~d~~~aL~el~rvLKPGGvlVi~Dl~t 327 (419)
T 3sso_A 255 IMDKSHVDELRIRTIQGDQNDAEFLDRIARRYGPFDIVIDDG-SHIN--AHVRTSFAALFPHVRPGGLYVIEDMWT 327 (419)
T ss_dssp SSCCGGGCBTTEEEEECCTTCHHHHHHHHHHHCCEEEEEECS-CCCH--HHHHHHHHHHGGGEEEEEEEEEECGGG
T ss_pred CCHHHhhcCCCcEEEEecccccchhhhhhcccCCccEEEECC-cccc--hhHHHHHHHHHHhcCCCeEEEEEeccc
Confidence 88776431 122 57899999865 4666 678899999999999999999987653
No 122
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=99.24 E-value=5.3e-11 Score=96.41 Aligned_cols=148 Identities=14% Similarity=0.254 Sum_probs=94.4
Q ss_pred CCCCeEEEEcCCCCcchHHHhcC------cc-----ccccceeeeeecCCcccc--------------------------
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSH------SE-----FREERVNAFVCNVVNDDL-------------------------- 113 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~------~~-----~~~~~~~~~~~D~~~~~~-------------------------- 113 (231)
+...+|+|+|||+|.++..++.. .. .....++++..|+...++
T Consensus 51 ~~~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~ 130 (374)
T 3b5i_A 51 PPPFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNR 130 (374)
T ss_dssp CCCEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCB
T ss_pred CCceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCC
Confidence 34689999999999999888511 01 112356666666544442
Q ss_pred ------------cCCCCCCCeeEEEEeeeeeccC--CC----------------------------------CHHHHHHH
Q 045799 114 ------------SRNVNPSSVDVVTLIFMLSAVS--PK----------------------------------KMPLILQN 145 (231)
Q Consensus 114 ------------~~~~~~~~fD~ii~~~~l~~~~--~~----------------------------------~~~~~l~~ 145 (231)
...+++++||+|+++.+||+++ ++ |+..+|+.
T Consensus 131 ~~f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ 210 (374)
T 3b5i_A 131 SYFVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRA 210 (374)
T ss_dssp CSEEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 1245789999999999999985 21 45567999
Q ss_pred HHHhcCCCeEEEEEeccCCchhh-------h----hhhccc-cccccceEE----eCCCeEEEeeCHHHHHHHHH-HcCc
Q 045799 146 IKAVLKPDGYILVCDYAIGDFAQ-------V----KLLDRN-QMIGDSFYV----RGDGTCSFYFSEDFLSTLFL-EAGF 208 (231)
Q Consensus 146 ~~~~Lk~gG~l~i~~~~~~~~~~-------~----~~~~~~-~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~-~~Gf 208 (231)
.++.|+|||.+++...+..+... . .+.... ....+.... ..-....++.+.+++..+++ +.||
T Consensus 211 ra~eL~pGG~mvl~~~gr~~~~~~~~~~~~~~~~~~l~~al~~l~~eG~i~~e~~d~f~~P~y~ps~~E~~~~l~~~~~F 290 (374)
T 3b5i_A 211 RAAEVKRGGAMFLVCLGRTSVDPTDQGGAGLLFGTHFQDAWDDLVREGLVAAEKRDGFNIPVYAPSLQDFKEVVDANGSF 290 (374)
T ss_dssp HHHHEEEEEEEEEEEEECCCSSTTCCHHHHHHHSSHHHHHHHHTTSSSSSCHHHHSSCCCCBCCCCHHHHHHHHHHHCSE
T ss_pred HHHHhCCCCEEEEEEecCCCCccccccchhhHHHHHHHHHHHHHHHhCCcchhhcccCCccccCCCHHHHHHHHHhcCCc
Confidence 99999999999998766654210 0 000000 000010000 00112234689999999998 5899
Q ss_pred eEEEEEEEee
Q 045799 209 STVDINIHLK 218 (231)
Q Consensus 209 ~~~~~~~~~~ 218 (231)
++..++....
T Consensus 291 ~I~~le~~~~ 300 (374)
T 3b5i_A 291 AIDKLVVYKG 300 (374)
T ss_dssp EEEEEEEEEC
T ss_pred EEEEEEEEee
Confidence 9999887653
No 123
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.24 E-value=6.8e-12 Score=98.34 Aligned_cols=109 Identities=16% Similarity=0.275 Sum_probs=75.1
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc----------------------CCCCCCCeeEEEEe
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS----------------------RNVNPSSVDVVTLI 128 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~----------------------~~~~~~~fD~ii~~ 128 (231)
.++.+|||+|||+|..+..++.... ..+++++|+++.++. .++++++||+|++.
T Consensus 108 ~~~~~vLDlG~GsG~~~~~la~~~~----~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~fD~Iv~n 183 (276)
T 2b3t_A 108 EQPCRILDLGTGTGAIALALASERP----DCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSALAGQQFAMIVSN 183 (276)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHHCT----TSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGGTTCCEEEEEEC
T ss_pred cCCCEEEEecCCccHHHHHHHHhCC----CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhhcccCCccEEEEC
Confidence 4567999999999999998873211 224555565543321 12336789999997
Q ss_pred e-------------eeeccCC----------CCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEe
Q 045799 129 F-------------MLSAVSP----------KKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVR 185 (231)
Q Consensus 129 ~-------------~l~~~~~----------~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (231)
. +++|-|. +....+++.+.+.|+|||.+++..
T Consensus 184 pPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~------------------------- 238 (276)
T 2b3t_A 184 PPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEH------------------------- 238 (276)
T ss_dssp CCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEEC-------------------------
T ss_pred CCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEE-------------------------
Confidence 3 3334331 245788999999999999998851
Q ss_pred CCCeEEEeeCHHHHHHHHHHcCceEEEEE
Q 045799 186 GDGTCSFYFSEDFLSTLFLEAGFSTVDIN 214 (231)
Q Consensus 186 ~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~ 214 (231)
.+.+.+++.++++++||+.+++.
T Consensus 239 ------~~~~~~~~~~~l~~~Gf~~v~~~ 261 (276)
T 2b3t_A 239 ------GWQQGEAVRQAFILAGYHDVETC 261 (276)
T ss_dssp ------CSSCHHHHHHHHHHTTCTTCCEE
T ss_pred ------CchHHHHHHHHHHHCCCcEEEEE
Confidence 01356789999999999876544
No 124
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.23 E-value=3.3e-11 Score=88.79 Aligned_cols=104 Identities=21% Similarity=0.330 Sum_probs=73.1
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc-----------------------CCCCC-CCeeEEE
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS-----------------------RNVNP-SSVDVVT 126 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~-----------------------~~~~~-~~fD~ii 126 (231)
.++.+|||+|||+|.++..++... .+++++|+++.++. ..++. ++||+|+
T Consensus 32 ~~~~~vldiG~G~G~~~~~l~~~~------~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~ 105 (192)
T 1l3i_A 32 GKNDVAVDVGCGTGGVTLELAGRV------RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKIPDIDIAV 105 (192)
T ss_dssp CTTCEEEEESCTTSHHHHHHHTTS------SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTSCCEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhc------CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhcccCCCCCEEE
Confidence 667899999999999998887442 24455555432211 01233 5899999
Q ss_pred EeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeEEEeeCHHHHHHHHHHc
Q 045799 127 LIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYFSEDFLSTLFLEA 206 (231)
Q Consensus 127 ~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 206 (231)
+..+++ ....+++.+.++|+|||.+++..... .+..++.+.+++.
T Consensus 106 ~~~~~~-----~~~~~l~~~~~~l~~gG~l~~~~~~~------------------------------~~~~~~~~~l~~~ 150 (192)
T 1l3i_A 106 VGGSGG-----ELQEILRIIKDKLKPGGRIIVTAILL------------------------------ETKFEAMECLRDL 150 (192)
T ss_dssp ESCCTT-----CHHHHHHHHHHTEEEEEEEEEEECBH------------------------------HHHHHHHHHHHHT
T ss_pred ECCchH-----HHHHHHHHHHHhcCCCcEEEEEecCc------------------------------chHHHHHHHHHHC
Confidence 987654 45889999999999999999874321 1345788899999
Q ss_pred CceEEEEEE
Q 045799 207 GFSTVDINI 215 (231)
Q Consensus 207 Gf~~~~~~~ 215 (231)
||.+.....
T Consensus 151 g~~~~~~~~ 159 (192)
T 1l3i_A 151 GFDVNITEL 159 (192)
T ss_dssp TCCCEEEEE
T ss_pred CCceEEEEE
Confidence 996554443
No 125
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.22 E-value=9.3e-11 Score=85.71 Aligned_cols=104 Identities=13% Similarity=0.241 Sum_probs=74.9
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc----------------------CCCCCCCeeEEEEe
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS----------------------RNVNPSSVDVVTLI 128 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~----------------------~~~~~~~fD~ii~~ 128 (231)
.++.+|||+|||+|.++..++.. ..+++++|+++.++. .++++++||+|++.
T Consensus 34 ~~~~~vLdiG~G~G~~~~~l~~~------~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~i~~~ 107 (183)
T 2yxd_A 34 NKDDVVVDVGCGSGGMTVEIAKR------CKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAEDVLDKLEFNKAFIG 107 (183)
T ss_dssp CTTCEEEEESCCCSHHHHHHHTT------SSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHHHGGGCCCSEEEEC
T ss_pred CCCCEEEEeCCCCCHHHHHHHhc------CCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccccccCCCCcEEEEC
Confidence 56789999999999999988741 334556665543321 02345789999998
Q ss_pred eeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeEEEeeCHHHHHHHHHHcCc
Q 045799 129 FMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYFSEDFLSTLFLEAGF 208 (231)
Q Consensus 129 ~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf 208 (231)
.+ .+...+++++.++ |||.+++.+... .+..++.+.++++||
T Consensus 108 ~~------~~~~~~l~~~~~~--~gG~l~~~~~~~------------------------------~~~~~~~~~l~~~g~ 149 (183)
T 2yxd_A 108 GT------KNIEKIIEILDKK--KINHIVANTIVL------------------------------ENAAKIINEFESRGY 149 (183)
T ss_dssp SC------SCHHHHHHHHHHT--TCCEEEEEESCH------------------------------HHHHHHHHHHHHTTC
T ss_pred Cc------ccHHHHHHHHhhC--CCCEEEEEeccc------------------------------ccHHHHHHHHHHcCC
Confidence 76 4678899999998 999999875322 124578899999999
Q ss_pred eEEEEEEEee
Q 045799 209 STVDINIHLK 218 (231)
Q Consensus 209 ~~~~~~~~~~ 218 (231)
.+..+.....
T Consensus 150 ~~~~~~~~~~ 159 (183)
T 2yxd_A 150 NVDAVNVFIS 159 (183)
T ss_dssp EEEEEEEEEE
T ss_pred eEEEEEeeee
Confidence 8877654433
No 126
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.21 E-value=5.8e-12 Score=94.62 Aligned_cols=85 Identities=13% Similarity=0.073 Sum_probs=54.5
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC---------------------CCCC-----CCeeE
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR---------------------NVNP-----SSVDV 124 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~---------------------~~~~-----~~fD~ 124 (231)
.++.+|||+|||+|.++..++... ...+++++|+++.++.. ++++ ++||+
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~----~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~ 104 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALAC----PGVSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIEWLIERAERGRPWHA 104 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHC----TTEEEEEEECC-------------------CCHHHHHHHHHHHHHTTCCBSE
T ss_pred CCCCEEEEecCCHhHHHHHHHHhC----CCCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHhhhhhhhhccCcccE
Confidence 567899999999999999888432 14467788887665532 2233 89999
Q ss_pred EEEeee------eeccCCCCH------------------HHHHHHHHHhcCCCeEEEEE
Q 045799 125 VTLIFM------LSAVSPKKM------------------PLILQNIKAVLKPDGYILVC 159 (231)
Q Consensus 125 ii~~~~------l~~~~~~~~------------------~~~l~~~~~~Lk~gG~l~i~ 159 (231)
|++... +++++++.. ..+++++.++|+|||.+++.
T Consensus 105 i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 163 (215)
T 4dzr_A 105 IVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFL 163 (215)
T ss_dssp EEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEE
T ss_pred EEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEE
Confidence 999533 333322211 78889999999999995444
No 127
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.21 E-value=4.4e-11 Score=94.97 Aligned_cols=115 Identities=20% Similarity=0.262 Sum_probs=73.6
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC-----------------------------CCCCCC
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR-----------------------------NVNPSS 121 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~-----------------------------~~~~~~ 121 (231)
+++.+|||||||+|..+..++.... ..+++++|+++.++.. ..++++
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~----~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~ 169 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGT----VEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNT 169 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTT----CCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTC
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCC----CCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCc
Confidence 4568999999999999999984421 2244555554322110 114678
Q ss_pred eeEEEEeeeeeccCCCCH--HHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeEEEeeCHHHH
Q 045799 122 VDVVTLIFMLSAVSPKKM--PLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYFSEDFL 199 (231)
Q Consensus 122 fD~ii~~~~l~~~~~~~~--~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 199 (231)
||+|++....++.+.... ..++++++++|+|||++++...+... .......+
T Consensus 170 fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~--------------------------~~~~~~~~ 223 (304)
T 3bwc_A 170 YDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGESIWL--------------------------DLELIEKM 223 (304)
T ss_dssp EEEEEEECC---------CCHHHHHHHHHHEEEEEEEEEEECCTTT--------------------------CHHHHHHH
T ss_pred eeEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCCccc--------------------------chHHHHHH
Confidence 999999766554432222 68999999999999999886322100 01245678
Q ss_pred HHHHHHcCceEEEEEE
Q 045799 200 STLFLEAGFSTVDINI 215 (231)
Q Consensus 200 ~~~l~~~Gf~~~~~~~ 215 (231)
.+.++++||..+....
T Consensus 224 ~~~l~~~GF~~v~~~~ 239 (304)
T 3bwc_A 224 SRFIRETGFASVQYAL 239 (304)
T ss_dssp HHHHHHHTCSEEEEEE
T ss_pred HHHHHhCCCCcEEEEE
Confidence 8999999998776654
No 128
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.21 E-value=1.8e-11 Score=95.83 Aligned_cols=83 Identities=16% Similarity=0.144 Sum_probs=60.9
Q ss_pred CCCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC---------------------CCCCCCeeEEEEe
Q 045799 70 NGNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR---------------------NVNPSSVDVVTLI 128 (231)
Q Consensus 70 ~~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~---------------------~~~~~~fD~ii~~ 128 (231)
..++.+|||||||+|.++..+++.. .+.+++++|+++.+++. .+++++||+|++.
T Consensus 120 l~~g~rVLDIGcG~G~~ta~~lA~~----~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~d~~FDvV~~~ 195 (298)
T 3fpf_A 120 FRRGERAVFIGGGPLPLTGILLSHV----YGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVIDGLEFDVLMVA 195 (298)
T ss_dssp CCTTCEEEEECCCSSCHHHHHHHHT----TCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGGGCCCSEEEEC
T ss_pred CCCcCEEEEECCCccHHHHHHHHHc----cCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCCCCCcCEEEEC
Confidence 4789999999999998775544221 13456666666555421 2346799999985
Q ss_pred eeeeccCCCCHHHHHHHHHHhcCCCeEEEEEec
Q 045799 129 FMLSAVSPKKMPLILQNIKAVLKPDGYILVCDY 161 (231)
Q Consensus 129 ~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~ 161 (231)
.. + ++...+++++.+.|||||++++.+.
T Consensus 196 a~---~--~d~~~~l~el~r~LkPGG~Lvv~~~ 223 (298)
T 3fpf_A 196 AL---A--EPKRRVFRNIHRYVDTETRIIYRTY 223 (298)
T ss_dssp TT---C--SCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred CC---c--cCHHHHHHHHHHHcCCCcEEEEEcC
Confidence 53 4 6889999999999999999999763
No 129
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.21 E-value=3.3e-11 Score=87.60 Aligned_cols=87 Identities=20% Similarity=0.192 Sum_probs=64.1
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC-------------C--------CCCCCeeEEEEee
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR-------------N--------VNPSSVDVVTLIF 129 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~-------------~--------~~~~~fD~ii~~~ 129 (231)
.++.+|||+|||+|.++..++.... ...+++++|+++ +... + +++++||+|++..
T Consensus 21 ~~~~~vLd~G~G~G~~~~~l~~~~~---~~~~v~~~D~~~-~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~D~i~~~~ 96 (180)
T 1ej0_A 21 KPGMTVVDLGAAPGGWSQYVVTQIG---GKGRIIACDLLP-MDPIVGVDFLQGDFRDELVMKALLERVGDSKVQVVMSDM 96 (180)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHHC---TTCEEEEEESSC-CCCCTTEEEEESCTTSHHHHHHHHHHHTTCCEEEEEECC
T ss_pred CCCCeEEEeCCCCCHHHHHHHHHhC---CCCeEEEEECcc-ccccCcEEEEEcccccchhhhhhhccCCCCceeEEEECC
Confidence 5678999999999999988874310 123556666654 3211 1 4567899999998
Q ss_pred eeeccCCCCH-----------HHHHHHHHHhcCCCeEEEEEeccC
Q 045799 130 MLSAVSPKKM-----------PLILQNIKAVLKPDGYILVCDYAI 163 (231)
Q Consensus 130 ~l~~~~~~~~-----------~~~l~~~~~~Lk~gG~l~i~~~~~ 163 (231)
++++. ... ..+++++.++|+|||.+++..+..
T Consensus 97 ~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 139 (180)
T 1ej0_A 97 APNMS--GTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQG 139 (180)
T ss_dssp CCCCC--SCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESS
T ss_pred Ccccc--CCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecC
Confidence 88877 344 689999999999999999876544
No 130
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.20 E-value=1.1e-10 Score=88.95 Aligned_cols=116 Identities=17% Similarity=0.205 Sum_probs=72.7
Q ss_pred CCCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc-------------------------CCCCCCCeeE
Q 045799 70 NGNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS-------------------------RNVNPSSVDV 124 (231)
Q Consensus 70 ~~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~-------------------------~~~~~~~fD~ 124 (231)
..++.+|||+|||+|.++..++.... ...++++|+++.++. .++. ++||+
T Consensus 72 ~~~~~~VLDlGcG~G~~~~~la~~~~----~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~-~~~D~ 146 (230)
T 1fbn_A 72 IKRDSKILYLGASAGTTPSHVADIAD----KGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIV-EKVDV 146 (230)
T ss_dssp CCTTCEEEEESCCSSHHHHHHHHHTT----TSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTS-CCEEE
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHcC----CcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccccccC-ccEEE
Confidence 35778999999999999998873321 124455555543321 1223 68999
Q ss_pred EEEeeeeeccCC-CCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeEEEeeCHHHHHHHH
Q 045799 125 VTLIFMLSAVSP-KKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYFSEDFLSTLF 203 (231)
Q Consensus 125 ii~~~~l~~~~~-~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 203 (231)
|+ ++++. .....+++++.+.|+|||.+++. +...... ..... ..+..+++. +|
T Consensus 147 v~-----~~~~~~~~~~~~l~~~~~~LkpgG~l~i~-~~~~~~~------~~~~~-------------~~~~~~~l~-~l 200 (230)
T 1fbn_A 147 IY-----EDVAQPNQAEILIKNAKWFLKKGGYGMIA-IKARSID------VTKDP-------------KEIFKEQKE-IL 200 (230)
T ss_dssp EE-----ECCCSTTHHHHHHHHHHHHEEEEEEEEEE-EEGGGTC------SSSCH-------------HHHHHHHHH-HH
T ss_pred EE-----EecCChhHHHHHHHHHHHhCCCCcEEEEE-EecCCCC------CCCCH-------------HHhhHHHHH-HH
Confidence 98 45532 23377899999999999999986 2211100 00000 012346777 88
Q ss_pred HHcCceEEEEEEE
Q 045799 204 LEAGFSTVDINIH 216 (231)
Q Consensus 204 ~~~Gf~~~~~~~~ 216 (231)
.++||++++....
T Consensus 201 ~~~Gf~~~~~~~~ 213 (230)
T 1fbn_A 201 EAGGFKIVDEVDI 213 (230)
T ss_dssp HHHTEEEEEEEEC
T ss_pred HHCCCEEEEEEcc
Confidence 9999999887653
No 131
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.20 E-value=6.7e-11 Score=91.80 Aligned_cols=109 Identities=10% Similarity=0.023 Sum_probs=74.0
Q ss_pred CCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc--------------------------CCCCCCCeeEE
Q 045799 72 NPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS--------------------------RNVNPSSVDVV 125 (231)
Q Consensus 72 ~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~--------------------------~~~~~~~fD~i 125 (231)
++.+|||+|||+|.++..++.... .+++++|+++.++. ..+++++||+|
T Consensus 49 ~~~~vLDlG~G~G~~~~~la~~~~-----~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~I 123 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLSTRTK-----AKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIV 123 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHHTTCC-----CEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEE
T ss_pred CCCEEEEcCCchhHHHHHHHHhcC-----CcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEE
Confidence 678999999999999998874421 14455555543321 12447899999
Q ss_pred EEeeeeecc------------------CCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCC
Q 045799 126 TLIFMLSAV------------------SPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGD 187 (231)
Q Consensus 126 i~~~~l~~~------------------~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (231)
+++-.+... ...+...+++.+.++|+|||.+++.. ..
T Consensus 124 i~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~-~~------------------------ 178 (259)
T 3lpm_A 124 TCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVH-RP------------------------ 178 (259)
T ss_dssp EECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEE-CT------------------------
T ss_pred EECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEE-cH------------------------
Confidence 996433221 11235679999999999999999852 11
Q ss_pred CeEEEeeCHHHHHHHHHHcCceEEEEEEE
Q 045799 188 GTCSFYFSEDFLSTLFLEAGFSTVDINIH 216 (231)
Q Consensus 188 ~~~~~~~~~~~l~~~l~~~Gf~~~~~~~~ 216 (231)
....++...+.+.||....+..+
T Consensus 179 ------~~~~~~~~~l~~~~~~~~~~~~v 201 (259)
T 3lpm_A 179 ------ERLLDIIDIMRKYRLEPKRIQFV 201 (259)
T ss_dssp ------TTHHHHHHHHHHTTEEEEEEEEE
T ss_pred ------HHHHHHHHHHHHCCCceEEEEEe
Confidence 23457788888889988877654
No 132
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.19 E-value=7e-11 Score=92.64 Aligned_cols=110 Identities=9% Similarity=0.087 Sum_probs=76.9
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC-----------------------CCCCCCeeEEEE
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR-----------------------NVNPSSVDVVTL 127 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~-----------------------~~~~~~fD~ii~ 127 (231)
.++.+|||+|||+|.++..++.... . +++++|+++.++.. ...+++||+|++
T Consensus 124 ~~~~~VLDlgcG~G~~~~~la~~~~----~-~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~~~~fD~Vi~ 198 (278)
T 2frn_A 124 KPDELVVDMFAGIGHLSLPIAVYGK----A-KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILM 198 (278)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTC----C-EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEEE
T ss_pred CCCCEEEEecccCCHHHHHHHHhCC----C-EEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcccCCccEEEE
Confidence 5688999999999999999874311 1 45666666544321 112578999988
Q ss_pred eeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeEEEeeCHHHHHHHHHHcC
Q 045799 128 IFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYFSEDFLSTLFLEAG 207 (231)
Q Consensus 128 ~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~G 207 (231)
.. +.....++.++.++|+|||.+++.+........ .-..+.+.+.++++|
T Consensus 199 ~~------p~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~------------------------~~~~~~i~~~~~~~G 248 (278)
T 2frn_A 199 GY------VVRTHEFIPKALSIAKDGAIIHYHNTVPEKLMP------------------------REPFETFKRITKEYG 248 (278)
T ss_dssp CC------CSSGGGGHHHHHHHEEEEEEEEEEEEEEGGGTT------------------------TTTHHHHHHHHHHTT
T ss_pred CC------chhHHHHHHHHHHHCCCCeEEEEEEeecccccc------------------------ccHHHHHHHHHHHcC
Confidence 42 245577899999999999999998655422110 014568899999999
Q ss_pred ceEEEEEE
Q 045799 208 FSTVDINI 215 (231)
Q Consensus 208 f~~~~~~~ 215 (231)
|++..+..
T Consensus 249 ~~~~~~~~ 256 (278)
T 2frn_A 249 YDVEKLNE 256 (278)
T ss_dssp CEEEEEEE
T ss_pred CeeEEeee
Confidence 99877443
No 133
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.19 E-value=4.7e-11 Score=93.08 Aligned_cols=83 Identities=18% Similarity=0.393 Sum_probs=61.5
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc------------------CCCCCCCeeEEEEeeeee
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS------------------RNVNPSSVDVVTLIFMLS 132 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~------------------~~~~~~~fD~ii~~~~l~ 132 (231)
.++.+|||||||+|.++..++.... +.+++++|+++.++. .++++++||+|++.++..
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~----~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~~ 159 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALP----EITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAIIRIYAPC 159 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCT----TSEEEEEESCHHHHHHHHHHCTTSEEEECCTTSCSBCTTCEEEEEEESCCC
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCC----CCeEEEEeCCHHHHHHHHHhCCCcEEEEcchhhCCCCCCceeEEEEeCChh
Confidence 4678999999999999998885421 235677777654421 245678999999865421
Q ss_pred ccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCch
Q 045799 133 AVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDF 166 (231)
Q Consensus 133 ~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~ 166 (231)
+++++.++|||||.+++.++.....
T Consensus 160 ---------~l~~~~~~L~pgG~l~~~~~~~~~~ 184 (269)
T 1p91_A 160 ---------KAEELARVVKPGGWVITATPGPRHL 184 (269)
T ss_dssp ---------CHHHHHHHEEEEEEEEEEEECTTTT
T ss_pred ---------hHHHHHHhcCCCcEEEEEEcCHHHH
Confidence 4788999999999999987766544
No 134
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.19 E-value=1.5e-11 Score=91.40 Aligned_cols=88 Identities=20% Similarity=0.256 Sum_probs=60.5
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC-------------------------CCCCCCeeEE
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR-------------------------NVNPSSVDVV 125 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~-------------------------~~~~~~fD~i 125 (231)
.++.+|||+|||+|.++..++.... ...+++++|+++.++.. .+.+++||+|
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~---~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v 97 (197)
T 3eey_A 21 KEGDTVVDATCGNGNDTAFLASLVG---ENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAV 97 (197)
T ss_dssp CTTCEEEESCCTTSHHHHHHHHHHC---TTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEE
T ss_pred CCCCEEEEcCCCCCHHHHHHHHHhC---CCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEE
Confidence 6678999999999999988873310 01244555555433210 1345789999
Q ss_pred EEeeeeeccC---------CCCHHHHHHHHHHhcCCCeEEEEEeccC
Q 045799 126 TLIFMLSAVS---------PKKMPLILQNIKAVLKPDGYILVCDYAI 163 (231)
Q Consensus 126 i~~~~l~~~~---------~~~~~~~l~~~~~~Lk~gG~l~i~~~~~ 163 (231)
++...+ ++ .++...+++++.++|+|||.+++..+..
T Consensus 98 ~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~ 142 (197)
T 3eey_A 98 MFNLGY--LPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYG 142 (197)
T ss_dssp EEEESB--CTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCB
T ss_pred EEcCCc--ccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccC
Confidence 988654 21 1244679999999999999999986544
No 135
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.16 E-value=3.1e-11 Score=90.38 Aligned_cols=78 Identities=12% Similarity=0.105 Sum_probs=56.2
Q ss_pred CCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc----------------------CCCCCCCeeEEEEee
Q 045799 72 NPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS----------------------RNVNPSSVDVVTLIF 129 (231)
Q Consensus 72 ~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~----------------------~~~~~~~fD~ii~~~ 129 (231)
++.+|||+|||+|..+..++.... ..+++++|+++.++. ...+.++||+|++..
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~----~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~~~ 140 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRP----EAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPSEPPFDGVISRA 140 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCT----TSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSCCCSCEEEEECSC
T ss_pred CCCeEEEECCCCCHHHHHHHHHCC----CCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCCccCCcCEEEEec
Confidence 468999999999999998873211 234555555543321 011357899999753
Q ss_pred eeeccCCCCHHHHHHHHHHhcCCCeEEEEE
Q 045799 130 MLSAVSPKKMPLILQNIKAVLKPDGYILVC 159 (231)
Q Consensus 130 ~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~ 159 (231)
+ .+...+++.+.+.|+|||.+++.
T Consensus 141 ----~--~~~~~~l~~~~~~L~~gG~l~~~ 164 (207)
T 1jsx_A 141 ----F--ASLNDMVSWCHHLPGEQGRFYAL 164 (207)
T ss_dssp ----S--SSHHHHHHHHTTSEEEEEEEEEE
T ss_pred ----c--CCHHHHHHHHHHhcCCCcEEEEE
Confidence 3 56789999999999999999886
No 136
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.15 E-value=3.9e-11 Score=88.51 Aligned_cols=86 Identities=19% Similarity=0.236 Sum_probs=61.7
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccc------------------------cCCCCCCCeeEEE
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDL------------------------SRNVNPSSVDVVT 126 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~------------------------~~~~~~~~fD~ii 126 (231)
.++.+|||+|||+|.++..++.. ..+++++|+++.++ ...+++++||+|+
T Consensus 51 ~~~~~vLdiG~G~G~~~~~~~~~------~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~ 124 (194)
T 1dus_A 51 DKDDDILDLGCGYGVIGIALADE------VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVKDRKYNKII 124 (194)
T ss_dssp CTTCEEEEETCTTSHHHHHHGGG------SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCTTSCEEEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHc------CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcccccCCceEEE
Confidence 46789999999999999888743 12334444432211 0123457899999
Q ss_pred EeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccC
Q 045799 127 LIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAI 163 (231)
Q Consensus 127 ~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~ 163 (231)
+...+++. .++...+++++.++|+|||.+++.+...
T Consensus 125 ~~~~~~~~-~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 160 (194)
T 1dus_A 125 TNPPIRAG-KEVLHRIIEEGKELLKDNGEIWVVIQTK 160 (194)
T ss_dssp ECCCSTTC-HHHHHHHHHHHHHHEEEEEEEEEEEEST
T ss_pred ECCCcccc-hhHHHHHHHHHHHHcCCCCEEEEEECCC
Confidence 98887762 1567899999999999999999986444
No 137
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.15 E-value=2e-10 Score=87.33 Aligned_cols=119 Identities=18% Similarity=0.054 Sum_probs=70.4
Q ss_pred CCCCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc------------------------CCCCCCCeeE
Q 045799 69 PNGNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS------------------------RNVNPSSVDV 124 (231)
Q Consensus 69 ~~~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~------------------------~~~~~~~fD~ 124 (231)
...++.+|||+|||+|.++..++.... ..-.++++|+++.++. .....++||+
T Consensus 73 ~l~~g~~VLDlG~GtG~~t~~la~~v~---~~G~V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da~~~~~~~~~~~~~D~ 149 (232)
T 3id6_C 73 PIRKGTKVLYLGAASGTTISHVSDIIE---LNGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSYKSVVENVDV 149 (232)
T ss_dssp SCCTTCEEEEETCTTSHHHHHHHHHHT---TTSEEEEEECCHHHHHHHHHHHHHCTTEEEEECCTTCGGGTTTTCCCEEE
T ss_pred CCCCCCEEEEEeecCCHHHHHHHHHhC---CCCEEEEEECcHHHHHHHHHHhhhcCCeEEEEcccccchhhhccccceEE
Confidence 357899999999999999988873210 0114455555553310 0112368999
Q ss_pred EEEeeeeeccCCCCHHH-HHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeEEEeeCHHHHHHHH
Q 045799 125 VTLIFMLSAVSPKKMPL-ILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYFSEDFLSTLF 203 (231)
Q Consensus 125 ii~~~~l~~~~~~~~~~-~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 203 (231)
|++.... .+... +...+.+.|||||.+++......-... .. .. -..+...+.|
T Consensus 150 I~~d~a~-----~~~~~il~~~~~~~LkpGG~lvisik~~~~d~t--~~-----~~--------------e~~~~~~~~L 203 (232)
T 3id6_C 150 LYVDIAQ-----PDQTDIAIYNAKFFLKVNGDMLLVIKARSIDVT--KD-----PK--------------EIYKTEVEKL 203 (232)
T ss_dssp EEECCCC-----TTHHHHHHHHHHHHEEEEEEEEEEEC---------CC-----SS--------------SSTTHHHHHH
T ss_pred EEecCCC-----hhHHHHHHHHHHHhCCCCeEEEEEEccCCcccC--CC-----HH--------------HHHHHHHHHH
Confidence 9986432 33444 455666699999999987422210000 00 00 0123466778
Q ss_pred HHcCceEEEEEEE
Q 045799 204 LEAGFSTVDINIH 216 (231)
Q Consensus 204 ~~~Gf~~~~~~~~ 216 (231)
+++||++++....
T Consensus 204 ~~~gf~~~~~~~l 216 (232)
T 3id6_C 204 ENSNFETIQIINL 216 (232)
T ss_dssp HHTTEEEEEEEEC
T ss_pred HHCCCEEEEEecc
Confidence 8899999986643
No 138
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.15 E-value=5.9e-11 Score=96.95 Aligned_cols=85 Identities=15% Similarity=0.184 Sum_probs=65.0
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC----------------------CCCCCCeeEEEEe
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR----------------------NVNPSSVDVVTLI 128 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~----------------------~~~~~~fD~ii~~ 128 (231)
.++.+|||+|||+|.++..++.. +.+++++|++..++.. ..++++||+|++.
T Consensus 232 ~~~~~VLDlGcG~G~~~~~la~~------g~~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~~~~~~fD~Ii~n 305 (381)
T 3dmg_A 232 VRGRQVLDLGAGYGALTLPLARM------GAEVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEALTEEARFDIIVTN 305 (381)
T ss_dssp TTTCEEEEETCTTSTTHHHHHHT------TCEEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTSCTTCCEEEEEEC
T ss_pred CCCCEEEEEeeeCCHHHHHHHHc------CCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhccccCCCeEEEEEC
Confidence 46789999999999999999844 2355666666544321 2234799999999
Q ss_pred eeeec---cCCCCHHHHHHHHHHhcCCCeEEEEEec
Q 045799 129 FMLSA---VSPKKMPLILQNIKAVLKPDGYILVCDY 161 (231)
Q Consensus 129 ~~l~~---~~~~~~~~~l~~~~~~Lk~gG~l~i~~~ 161 (231)
..+|+ ...++...+++++.+.|+|||.+++...
T Consensus 306 pp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n 341 (381)
T 3dmg_A 306 PPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSN 341 (381)
T ss_dssp CCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEEc
Confidence 99888 2236678999999999999999999743
No 139
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.15 E-value=4.6e-11 Score=89.84 Aligned_cols=81 Identities=15% Similarity=0.236 Sum_probs=57.5
Q ss_pred CCCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc-------------------------CCCCCCCeeE
Q 045799 70 NGNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS-------------------------RNVNPSSVDV 124 (231)
Q Consensus 70 ~~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~-------------------------~~~~~~~fD~ 124 (231)
..++.+|||+|||+|..+..++.... ..+++++|+++.++. .++ .++||+
T Consensus 55 ~~~g~~VLDlGcGtG~~~~~la~~~~----~~~V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~~~~~~~~~~-~~~fD~ 129 (210)
T 1nt2_A 55 LRGDERVLYLGAASGTTVSHLADIVD----EGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGI-VEKVDL 129 (210)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHTT----TSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTT-CCCEEE
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHcC----CCEEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCchhhccc-ccceeE
Confidence 36788999999999999988874321 125677777764310 012 368999
Q ss_pred EEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEE
Q 045799 125 VTLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVC 159 (231)
Q Consensus 125 ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~ 159 (231)
|++.. .+ +++...++++++++|||||.+++.
T Consensus 130 V~~~~-~~---~~~~~~~l~~~~r~LkpgG~l~i~ 160 (210)
T 1nt2_A 130 IYQDI-AQ---KNQIEILKANAEFFLKEKGEVVIM 160 (210)
T ss_dssp EEECC-CS---TTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEec-cC---hhHHHHHHHHHHHHhCCCCEEEEE
Confidence 99862 11 234455699999999999999987
No 140
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.15 E-value=3.8e-11 Score=92.93 Aligned_cols=81 Identities=12% Similarity=0.081 Sum_probs=53.9
Q ss_pred EEEEeeeeeccCCCC-HHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeEEEeeCHHHHHHH
Q 045799 124 VVTLIFMLSAVSPKK-MPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYFSEDFLSTL 202 (231)
Q Consensus 124 ~ii~~~~l~~~~~~~-~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 202 (231)
.|+++.+|||+++++ +..+++++++.|+|||+|++++......... .. .+...+ ...+....+++.+++..+
T Consensus 163 av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~d~~p~~-~~----~~~~~~--~~~g~p~~~rs~~ei~~~ 235 (277)
T 3giw_A 163 ALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTAEFAPQE-VG----RVAREY--AARNMPMRLRTHAEAEEF 235 (277)
T ss_dssp EEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECCTTSHHH-HH----HHHHHH--HHTTCCCCCCCHHHHHHT
T ss_pred hHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccCCCCHHH-HH----HHHHHH--HhcCCCCccCCHHHHHHH
Confidence 688999999996443 6899999999999999999998765421110 00 000000 000111245799999999
Q ss_pred HHHcCceEEEE
Q 045799 203 FLEAGFSTVDI 213 (231)
Q Consensus 203 l~~~Gf~~~~~ 213 (231)
|. ||++++-
T Consensus 236 f~--GlelveP 244 (277)
T 3giw_A 236 FE--GLELVEP 244 (277)
T ss_dssp TT--TSEECTT
T ss_pred hC--CCcccCC
Confidence 94 9997763
No 141
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.14 E-value=9.3e-11 Score=87.31 Aligned_cols=91 Identities=13% Similarity=0.187 Sum_probs=61.8
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccc------------cCC----------------------
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDL------------SRN---------------------- 116 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~------------~~~---------------------- 116 (231)
.++.+|||+|||+|.++..++.... ....+++++|+++... ..+
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~--~~~~~v~gvD~s~~~~~~~v~~~~~d~~~~~~~~~~~~~~i~~~~~~~~~~~~ 98 (201)
T 2plw_A 21 KKNKIILDIGCYPGSWCQVILERTK--NYKNKIIGIDKKIMDPIPNVYFIQGEIGKDNMNNIKNINYIDNMNNNSVDYKL 98 (201)
T ss_dssp CTTEEEEEESCTTCHHHHHHHHHTT--TSCEEEEEEESSCCCCCTTCEEEECCTTTTSSCCC-----------CHHHHHH
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHcC--CCCceEEEEeCCccCCCCCceEEEccccchhhhhhccccccccccchhhHHHH
Confidence 5678999999999999998874321 0023567777765310 011
Q ss_pred ---CCCCCeeEEEEeeeeeccCC--CCH-------HHHHHHHHHhcCCCeEEEEEeccC
Q 045799 117 ---VNPSSVDVVTLIFMLSAVSP--KKM-------PLILQNIKAVLKPDGYILVCDYAI 163 (231)
Q Consensus 117 ---~~~~~fD~ii~~~~l~~~~~--~~~-------~~~l~~~~~~Lk~gG~l~i~~~~~ 163 (231)
+++++||+|++...+++... .+. ..+++++.++|+|||.+++..+..
T Consensus 99 ~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 157 (201)
T 2plw_A 99 KEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYLG 157 (201)
T ss_dssp HHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred HhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeCC
Confidence 34578999999887766321 111 247889999999999999865443
No 142
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.13 E-value=6.3e-11 Score=90.44 Aligned_cols=84 Identities=14% Similarity=0.149 Sum_probs=57.2
Q ss_pred CCCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc------------------------CCCCCCCeeEE
Q 045799 70 NGNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS------------------------RNVNPSSVDVV 125 (231)
Q Consensus 70 ~~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~------------------------~~~~~~~fD~i 125 (231)
..++.+|||+|||+|.++..++.... ...+++++|+++.++. .++.+++||+|
T Consensus 75 ~~~~~~vLDlG~G~G~~~~~la~~~g---~~~~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~~D~V 151 (233)
T 2ipx_A 75 IKPGAKVLYLGAASGTTVSHVSDIVG---PDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVI 151 (233)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHC---TTCEEEEECCCHHHHHHHHHHHHHCTTEEEECSCTTCGGGGGGGCCCEEEE
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHhC---CCcEEEEEECCHHHHHHHHHHhhccCCeEEEEcccCChhhhcccCCcEEEE
Confidence 46788999999999999998874310 0124556666532110 12235789999
Q ss_pred EEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEe
Q 045799 126 TLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCD 160 (231)
Q Consensus 126 i~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~ 160 (231)
++... .++....++.++.+.|||||.+++..
T Consensus 152 ~~~~~----~~~~~~~~~~~~~~~LkpgG~l~i~~ 182 (233)
T 2ipx_A 152 FADVA----QPDQTRIVALNAHTFLRNGGHFVISI 182 (233)
T ss_dssp EECCC----CTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEcCC----CccHHHHHHHHHHHHcCCCeEEEEEE
Confidence 98443 22444667889999999999999953
No 143
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.12 E-value=1.6e-10 Score=90.68 Aligned_cols=82 Identities=22% Similarity=0.198 Sum_probs=61.4
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecC-Cccccc-----------------------C-----------
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNV-VNDDLS-----------------------R----------- 115 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~-~~~~~~-----------------------~----------- 115 (231)
.++.+|||||||+|.++..++... ..+++++|+ ++.++. .
T Consensus 78 ~~~~~vLDlG~G~G~~~~~~a~~~-----~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~ 152 (281)
T 3bzb_A 78 IAGKTVCELGAGAGLVSIVAFLAG-----ADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSP 152 (281)
T ss_dssp TTTCEEEETTCTTSHHHHHHHHTT-----CSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCT
T ss_pred cCCCeEEEecccccHHHHHHHHcC-----CCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCcc
Confidence 456799999999999998877431 115566777 332210 0
Q ss_pred -CC----CCCCeeEEEEeeeeeccCCCCHHHHHHHHHHhcC---C--CeEEEEE
Q 045799 116 -NV----NPSSVDVVTLIFMLSAVSPKKMPLILQNIKAVLK---P--DGYILVC 159 (231)
Q Consensus 116 -~~----~~~~fD~ii~~~~l~~~~~~~~~~~l~~~~~~Lk---~--gG~l~i~ 159 (231)
.+ ++++||+|++..+++|. ++...+++.+.++|+ | ||.+++.
T Consensus 153 ~~~~~~~~~~~fD~Ii~~dvl~~~--~~~~~ll~~l~~~Lk~~~p~~gG~l~v~ 204 (281)
T 3bzb_A 153 DSLQRCTGLQRFQVVLLADLLSFH--QAHDALLRSVKMLLALPANDPTAVALVT 204 (281)
T ss_dssp HHHHHHHSCSSBSEEEEESCCSCG--GGHHHHHHHHHHHBCCTTTCTTCEEEEE
T ss_pred HHHHhhccCCCCCEEEEeCcccCh--HHHHHHHHHHHHHhcccCCCCCCEEEEE
Confidence 01 25789999999999988 789999999999999 9 9988764
No 144
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.12 E-value=9.1e-11 Score=90.69 Aligned_cols=105 Identities=16% Similarity=0.177 Sum_probs=72.1
Q ss_pred CCCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccc-----------------------cCCCCCCCeeEEE
Q 045799 70 NGNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDL-----------------------SRNVNPSSVDVVT 126 (231)
Q Consensus 70 ~~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~-----------------------~~~~~~~~fD~ii 126 (231)
..++.+|||+|||+|.++..++.... ...+++++|+++.++ ...+++++||+|+
T Consensus 91 ~~~~~~vldiG~G~G~~~~~l~~~~~---~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~v~ 167 (255)
T 3mb5_A 91 ISPGDFIVEAGVGSGALTLFLANIVG---PEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEGIEEENVDHVI 167 (255)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHC---TTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGCCCCCSEEEEE
T ss_pred CCCCCEEEEecCCchHHHHHHHHHhC---CCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhccCCCCcCEEE
Confidence 36788999999999999988873300 012344555543322 1135667899999
Q ss_pred EeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeEEEeeCHHHHHHHHHHc
Q 045799 127 LIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYFSEDFLSTLFLEA 206 (231)
Q Consensus 127 ~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 206 (231)
+ +. .++..+++++.++|+|||.+++..... ....++.+.+++.
T Consensus 168 ~-----~~--~~~~~~l~~~~~~L~~gG~l~~~~~~~------------------------------~~~~~~~~~l~~~ 210 (255)
T 3mb5_A 168 L-----DL--PQPERVVEHAAKALKPGGFFVAYTPCS------------------------------NQVMRLHEKLREF 210 (255)
T ss_dssp E-----CS--SCGGGGHHHHHHHEEEEEEEEEEESSH------------------------------HHHHHHHHHHHHT
T ss_pred E-----CC--CCHHHHHHHHHHHcCCCCEEEEEECCH------------------------------HHHHHHHHHHHHc
Confidence 7 34 567789999999999999999864221 1235677888888
Q ss_pred C--ceEEEEE
Q 045799 207 G--FSTVDIN 214 (231)
Q Consensus 207 G--f~~~~~~ 214 (231)
| |..+++.
T Consensus 211 g~~f~~~~~~ 220 (255)
T 3mb5_A 211 KDYFMKPRTI 220 (255)
T ss_dssp GGGBSCCEEE
T ss_pred CCCccccEEE
Confidence 8 8666553
No 145
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.11 E-value=7.3e-11 Score=87.13 Aligned_cols=88 Identities=14% Similarity=0.057 Sum_probs=64.0
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC-------------------------CCCCCCeeEE
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR-------------------------NVNPSSVDVV 125 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~-------------------------~~~~~~fD~i 125 (231)
.++.+|||+|||+|.++..++... ..+++++|+++.++.. .+++++||+|
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~~-----~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i 117 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSRG-----AASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLV 117 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTT-----CSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSSCCSEE
T ss_pred CCCCEEEEeCCCcCHHHHHHHHCC-----CCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCCCccEE
Confidence 457899999999999998776421 1245666666544321 1346899999
Q ss_pred EEeeeeeccCCCCHHHHHHHHHH--hcCCCeEEEEEeccCC
Q 045799 126 TLIFMLSAVSPKKMPLILQNIKA--VLKPDGYILVCDYAIG 164 (231)
Q Consensus 126 i~~~~l~~~~~~~~~~~l~~~~~--~Lk~gG~l~i~~~~~~ 164 (231)
++...+++. .++...+++.+.+ +|+|||++++......
T Consensus 118 ~~~~p~~~~-~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~~ 157 (189)
T 3p9n_A 118 LADPPYNVD-SADVDAILAALGTNGWTREGTVAVVERATTC 157 (189)
T ss_dssp EECCCTTSC-HHHHHHHHHHHHHSSSCCTTCEEEEEEETTS
T ss_pred EECCCCCcc-hhhHHHHHHHHHhcCccCCCeEEEEEecCCC
Confidence 998776653 1467889999999 9999999999765443
No 146
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.11 E-value=2.5e-10 Score=86.16 Aligned_cols=105 Identities=21% Similarity=0.233 Sum_probs=75.6
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC-----------------------CCCCC-CeeEEE
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR-----------------------NVNPS-SVDVVT 126 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~-----------------------~~~~~-~fD~ii 126 (231)
+++.+|||||||+|.++..++.... ...++.+|+++.++.. +++.+ +||+|+
T Consensus 14 ~~g~~VlDIGtGsG~l~i~la~~~~----~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~~~~~D~Iv 89 (225)
T 3kr9_A 14 SQGAILLDVGSDHAYLPIELVERGQ----IKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEETDQVSVIT 89 (225)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTS----EEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHhCC----CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhcccCcCCCEEE
Confidence 6778999999999999999884321 2245666666544321 23333 699998
Q ss_pred EeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeEEEeeCHHHHHHHHHHc
Q 045799 127 LIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYFSEDFLSTLFLEA 206 (231)
Q Consensus 127 ~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 206 (231)
...+-..+ ...++....+.|+++|.+++... .....++++|.+.
T Consensus 90 iaG~Gg~~----i~~Il~~~~~~L~~~~~lVlq~~--------------------------------~~~~~vr~~L~~~ 133 (225)
T 3kr9_A 90 IAGMGGRL----IARILEEGLGKLANVERLILQPN--------------------------------NREDDLRIWLQDH 133 (225)
T ss_dssp EEEECHHH----HHHHHHHTGGGCTTCCEEEEEES--------------------------------SCHHHHHHHHHHT
T ss_pred EcCCChHH----HHHHHHHHHHHhCCCCEEEEECC--------------------------------CCHHHHHHHHHHC
Confidence 87654322 67789999999999999988621 1346889999999
Q ss_pred CceEEEEEE
Q 045799 207 GFSTVDINI 215 (231)
Q Consensus 207 Gf~~~~~~~ 215 (231)
||.+++...
T Consensus 134 Gf~i~~e~l 142 (225)
T 3kr9_A 134 GFQIVAESI 142 (225)
T ss_dssp TEEEEEEEE
T ss_pred CCEEEEEEE
Confidence 999998753
No 147
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.11 E-value=2.4e-10 Score=86.39 Aligned_cols=105 Identities=20% Similarity=0.149 Sum_probs=77.3
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC-----------------------CCCC-CCeeEEE
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR-----------------------NVNP-SSVDVVT 126 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~-----------------------~~~~-~~fD~ii 126 (231)
+++.+|||||||+|.++..++.... ...++++|+++.++.. .+.. ++||+|+
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~----~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~~D~Iv 95 (230)
T 3lec_A 20 PKGARLLDVGSDHAYLPIFLLQMGY----CDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADNIDTIT 95 (230)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTC----EEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEE
T ss_pred CCCCEEEEECCchHHHHHHHHHhCC----CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccccccCEEE
Confidence 6788999999999999999884421 2245667766555421 1222 3799998
Q ss_pred EeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeEEEeeCHHHHHHHHHHc
Q 045799 127 LIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYFSEDFLSTLFLEA 206 (231)
Q Consensus 127 ~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 206 (231)
..++-..+ ...++....+.|+++|.+++.. ....+.++++|.+.
T Consensus 96 iaGmGg~l----I~~IL~~~~~~l~~~~~lIlqp--------------------------------~~~~~~lr~~L~~~ 139 (230)
T 3lec_A 96 ICGMGGRL----IADILNNDIDKLQHVKTLVLQP--------------------------------NNREDDLRKWLAAN 139 (230)
T ss_dssp EEEECHHH----HHHHHHHTGGGGTTCCEEEEEE--------------------------------SSCHHHHHHHHHHT
T ss_pred EeCCchHH----HHHHHHHHHHHhCcCCEEEEEC--------------------------------CCChHHHHHHHHHC
Confidence 87765543 6778889999999999998862 12457899999999
Q ss_pred CceEEEEEE
Q 045799 207 GFSTVDINI 215 (231)
Q Consensus 207 Gf~~~~~~~ 215 (231)
||.+++...
T Consensus 140 Gf~i~~E~l 148 (230)
T 3lec_A 140 DFEIVAEDI 148 (230)
T ss_dssp TEEEEEEEE
T ss_pred CCEEEEEEE
Confidence 999998764
No 148
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.10 E-value=1.3e-10 Score=93.99 Aligned_cols=82 Identities=21% Similarity=0.225 Sum_probs=61.4
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc------------------------CCCCCCCeeEEE
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS------------------------RNVNPSSVDVVT 126 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~------------------------~~~~~~~fD~ii 126 (231)
.++.+|||||||+|.++..++... ..+++++|+++ ++. .++++++||+|+
T Consensus 65 ~~~~~VLDvGcG~G~~~~~la~~g-----~~~v~gvD~s~-~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Ii 138 (349)
T 3q7e_A 65 FKDKVVLDVGSGTGILCMFAAKAG-----ARKVIGIECSS-ISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIII 138 (349)
T ss_dssp HTTCEEEEESCTTSHHHHHHHHTT-----CSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEE
T ss_pred CCCCEEEEEeccchHHHHHHHHCC-----CCEEEEECcHH-HHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEE
Confidence 567899999999999998887441 12556666662 221 145678999999
Q ss_pred Eeeeeecc-CCCCHHHHHHHHHHhcCCCeEEEE
Q 045799 127 LIFMLSAV-SPKKMPLILQNIKAVLKPDGYILV 158 (231)
Q Consensus 127 ~~~~l~~~-~~~~~~~~l~~~~~~Lk~gG~l~i 158 (231)
+..+.+++ ....+..++..+.++|||||+++.
T Consensus 139 s~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 139 SEWMGYCLFYESMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp ECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEES
T ss_pred EccccccccCchhHHHHHHHHHHhCCCCCEEcc
Confidence 97764444 247889999999999999999874
No 149
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.09 E-value=2.2e-10 Score=89.64 Aligned_cols=106 Identities=16% Similarity=0.114 Sum_probs=72.5
Q ss_pred CCCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccc-----------------------cCCCCCCCeeEEE
Q 045799 70 NGNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDL-----------------------SRNVNPSSVDVVT 126 (231)
Q Consensus 70 ~~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~-----------------------~~~~~~~~fD~ii 126 (231)
..++.+|||+|||+|.++..++... ....+++++|+++.++ ..++++++||+|+
T Consensus 108 ~~~~~~VLD~G~G~G~~~~~la~~~---~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~~fD~Vi 184 (275)
T 1yb2_A 108 LRPGMDILEVGVGSGNMSSYILYAL---NGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFISDQMYDAVI 184 (275)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHH---TTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCCCSCCEEEEE
T ss_pred CCCcCEEEEecCCCCHHHHHHHHHc---CCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhccCcCCCccEEE
Confidence 4677899999999999998887320 0012344444433211 1134557899999
Q ss_pred EeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeEEEeeCHHHHHHHHHHc
Q 045799 127 LIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYFSEDFLSTLFLEA 206 (231)
Q Consensus 127 ~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 206 (231)
+ ++ .++..+++++.+.|+|||.+++.+... ...+.+.+.++++
T Consensus 185 ~-----~~--~~~~~~l~~~~~~LkpgG~l~i~~~~~------------------------------~~~~~~~~~l~~~ 227 (275)
T 1yb2_A 185 A-----DI--PDPWNHVQKIASMMKPGSVATFYLPNF------------------------------DQSEKTVLSLSAS 227 (275)
T ss_dssp E-----CC--SCGGGSHHHHHHTEEEEEEEEEEESSH------------------------------HHHHHHHHHSGGG
T ss_pred E-----cC--cCHHHHHHHHHHHcCCCCEEEEEeCCH------------------------------HHHHHHHHHHHHC
Confidence 8 45 567889999999999999999875221 0234667778888
Q ss_pred CceEEEEEE
Q 045799 207 GFSTVDINI 215 (231)
Q Consensus 207 Gf~~~~~~~ 215 (231)
||..+++..
T Consensus 228 Gf~~~~~~~ 236 (275)
T 1yb2_A 228 GMHHLETVE 236 (275)
T ss_dssp TEEEEEEEE
T ss_pred CCeEEEEEE
Confidence 988777654
No 150
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.08 E-value=1.5e-10 Score=94.35 Aligned_cols=86 Identities=13% Similarity=0.232 Sum_probs=60.7
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc-------------------------CCCCCCCeeEE
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS-------------------------RNVNPSSVDVV 125 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~-------------------------~~~~~~~fD~i 125 (231)
.++.+|||+|||+|.++..++.... ..+++++|++..++. .++++++||+|
T Consensus 221 ~~~~~VLDlGcG~G~~s~~la~~~p----~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~~~~~fD~I 296 (375)
T 4dcm_A 221 NLEGEIVDLGCGNGVIGLTLLDKNP----QAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAV 296 (375)
T ss_dssp SCCSEEEEETCTTCHHHHHHHHHCT----TCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTCCTTCEEEE
T ss_pred cCCCeEEEEeCcchHHHHHHHHHCC----CCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccCCCCCeeEE
Confidence 4458999999999999999883311 234555665544321 13456799999
Q ss_pred EEeeeeec---cCCCCHHHHHHHHHHhcCCCeEEEEEe
Q 045799 126 TLIFMLSA---VSPKKMPLILQNIKAVLKPDGYILVCD 160 (231)
Q Consensus 126 i~~~~l~~---~~~~~~~~~l~~~~~~Lk~gG~l~i~~ 160 (231)
++...+|+ +.......+++++.+.|+|||.+++..
T Consensus 297 i~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~ 334 (375)
T 4dcm_A 297 LCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVA 334 (375)
T ss_dssp EECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEE
Confidence 99988875 333445578999999999999999974
No 151
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.08 E-value=9.6e-11 Score=87.89 Aligned_cols=78 Identities=13% Similarity=0.103 Sum_probs=56.7
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc-----------------------CCCCCCCeeEEEE
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS-----------------------RNVNPSSVDVVTL 127 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~-----------------------~~~~~~~fD~ii~ 127 (231)
.++.+|||+|||+|.++..++.. ..+++++|+++.++. ...++++||+|++
T Consensus 76 ~~~~~vLdiG~G~G~~~~~la~~------~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~ 149 (210)
T 3lbf_A 76 TPQSRVLEIGTGSGYQTAILAHL------VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQARAPFDAIIV 149 (210)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHH------SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHh------CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCccCCCccEEEE
Confidence 67889999999999999888733 123444444432221 1123578999999
Q ss_pred eeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEecc
Q 045799 128 IFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYA 162 (231)
Q Consensus 128 ~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~ 162 (231)
..+++|+++ .+.+.|+|||++++....
T Consensus 150 ~~~~~~~~~--------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 150 TAAPPEIPT--------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp SSBCSSCCT--------HHHHTEEEEEEEEEEECS
T ss_pred ccchhhhhH--------HHHHhcccCcEEEEEEcC
Confidence 999999952 578999999999987544
No 152
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.07 E-value=1.6e-10 Score=94.38 Aligned_cols=83 Identities=18% Similarity=0.209 Sum_probs=61.8
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC------------------------CCCCCCeeEEE
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR------------------------NVNPSSVDVVT 126 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~------------------------~~~~~~fD~ii 126 (231)
.++.+|||||||+|.++..++... ..+++++|++ .++.. +++ ++||+|+
T Consensus 62 ~~~~~VLDlGcGtG~ls~~la~~g-----~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~D~Iv 134 (376)
T 3r0q_C 62 FEGKTVLDVGTGSGILAIWSAQAG-----ARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISLP-EKVDVII 134 (376)
T ss_dssp TTTCEEEEESCTTTHHHHHHHHTT-----CSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCCS-SCEEEEE
T ss_pred CCCCEEEEeccCcCHHHHHHHhcC-----CCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCcC-CcceEEE
Confidence 567899999999999998887541 1156677776 44311 223 7899999
Q ss_pred EeeeeeccC-CCCHHHHHHHHHHhcCCCeEEEEEe
Q 045799 127 LIFMLSAVS-PKKMPLILQNIKAVLKPDGYILVCD 160 (231)
Q Consensus 127 ~~~~l~~~~-~~~~~~~l~~~~~~Lk~gG~l~i~~ 160 (231)
+..+.+++. ...+..+++.+.+.|+|||++++..
T Consensus 135 ~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~ 169 (376)
T 3r0q_C 135 SEWMGYFLLRESMFDSVISARDRWLKPTGVMYPSH 169 (376)
T ss_dssp ECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESSE
T ss_pred EcChhhcccchHHHHHHHHHHHhhCCCCeEEEEec
Confidence 976656554 3568889999999999999998643
No 153
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.06 E-value=9.5e-10 Score=87.17 Aligned_cols=85 Identities=14% Similarity=0.043 Sum_probs=55.4
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecC----Ccccc--------------------cCCCCCCCeeEEE
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNV----VNDDL--------------------SRNVNPSSVDVVT 126 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~----~~~~~--------------------~~~~~~~~fD~ii 126 (231)
.++.+|||||||+|.++..++... .++++|+ +..++ ...++.++||+|+
T Consensus 81 ~~g~~VLDlGcG~G~~s~~la~~~-------~V~gvD~~~~~~~~~~~~~~~~~~~~~~v~~~~~~D~~~l~~~~fD~V~ 153 (305)
T 2p41_A 81 TPEGKVVDLGCGRGGWSYYCGGLK-------NVREVKGLTKGGPGHEEPIPMSTYGWNLVRLQSGVDVFFIPPERCDTLL 153 (305)
T ss_dssp CCCEEEEEETCTTSHHHHHHHTST-------TEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCTTTSCCCCCSEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHhcC-------CEEEEeccccCchhHHHHHHhhhcCCCCeEEEeccccccCCcCCCCEEE
Confidence 567899999999999998887541 2233333 11000 0022457899999
Q ss_pred Eeeeee---ccCCCCH--HHHHHHHHHhcCCCeEEEEEeccC
Q 045799 127 LIFMLS---AVSPKKM--PLILQNIKAVLKPDGYILVCDYAI 163 (231)
Q Consensus 127 ~~~~l~---~~~~~~~--~~~l~~~~~~Lk~gG~l~i~~~~~ 163 (231)
+...++ +.. +.. ..++..+.++|||||.+++..+..
T Consensus 154 sd~~~~~g~~~~-d~~~~l~~L~~~~~~LkpGG~~v~kv~~~ 194 (305)
T 2p41_A 154 CDIGESSPNPTV-EAGRTLRVLNLVENWLSNNTQFCVKVLNP 194 (305)
T ss_dssp ECCCCCCSSHHH-HHHHHHHHHHHHHHHCCTTCEEEEEESCC
T ss_pred ECCccccCcchh-hHHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 976653 211 111 157888999999999998866655
No 154
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.06 E-value=3.5e-10 Score=83.77 Aligned_cols=94 Identities=16% Similarity=0.093 Sum_probs=62.3
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCcccc-----ccceeeeeecCCccc-c-------cCC-------------CCCCCeeE
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFR-----EERVNAFVCNVVNDD-L-------SRN-------------VNPSSVDV 124 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~-----~~~~~~~~~D~~~~~-~-------~~~-------------~~~~~fD~ 124 (231)
.++.+|||+|||+|.++..++...... ....+++++|+++.. . ... +++++||+
T Consensus 21 ~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~fD~ 100 (196)
T 2nyu_A 21 RPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFPLEGATFLCPADVTDPRTSQRILEVLPGRRADV 100 (196)
T ss_dssp CTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCCCTTCEEECSCCTTSHHHHHHHHHHSGGGCEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcccCCCCeEEEeccCCCHHHHHHHHHhcCCCCCcE
Confidence 567899999999999999887432100 001366777877533 1 001 12358999
Q ss_pred EEEeeeeeccCC--CCH-------HHHHHHHHHhcCCCeEEEEEeccCC
Q 045799 125 VTLIFMLSAVSP--KKM-------PLILQNIKAVLKPDGYILVCDYAIG 164 (231)
Q Consensus 125 ii~~~~l~~~~~--~~~-------~~~l~~~~~~Lk~gG~l~i~~~~~~ 164 (231)
|++...+++... .+. ..+++++.++|+|||.+++.++...
T Consensus 101 V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~ 149 (196)
T 2nyu_A 101 ILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAGS 149 (196)
T ss_dssp EEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCSG
T ss_pred EEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCc
Confidence 999665443210 112 4789999999999999999866543
No 155
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.05 E-value=4.9e-10 Score=85.39 Aligned_cols=105 Identities=12% Similarity=0.093 Sum_probs=75.6
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC-----------------------CCCC-CCeeEEE
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR-----------------------NVNP-SSVDVVT 126 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~-----------------------~~~~-~~fD~ii 126 (231)
+++.+|||||||+|.++..++.... ...++++|+++.++.. .+.. ++||+|+
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~----~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~Iv 95 (244)
T 3gnl_A 20 TKNERIADIGSDHAYLPCFAVKNQT----ASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIV 95 (244)
T ss_dssp CSSEEEEEETCSTTHHHHHHHHTTS----EEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEE
T ss_pred CCCCEEEEECCccHHHHHHHHHhCC----CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccccccEEE
Confidence 6788999999999999999884321 2245666666554321 2222 3599998
Q ss_pred EeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeEEEeeCHHHHHHHHHHc
Q 045799 127 LIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYFSEDFLSTLFLEA 206 (231)
Q Consensus 127 ~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 206 (231)
...+-..+ ...++....+.|+++|.+++.. ......++++|.+.
T Consensus 96 iagmGg~l----I~~IL~~~~~~L~~~~~lIlq~--------------------------------~~~~~~lr~~L~~~ 139 (244)
T 3gnl_A 96 IAGMGGTL----IRTILEEGAAKLAGVTKLILQP--------------------------------NIAAWQLREWSEQN 139 (244)
T ss_dssp EEEECHHH----HHHHHHHTGGGGTTCCEEEEEE--------------------------------SSCHHHHHHHHHHH
T ss_pred EeCCchHH----HHHHHHHHHHHhCCCCEEEEEc--------------------------------CCChHHHHHHHHHC
Confidence 87665433 6778899999999999998862 12356889999999
Q ss_pred CceEEEEEE
Q 045799 207 GFSTVDINI 215 (231)
Q Consensus 207 Gf~~~~~~~ 215 (231)
||.+++...
T Consensus 140 Gf~i~~E~l 148 (244)
T 3gnl_A 140 NWLITSEAI 148 (244)
T ss_dssp TEEEEEEEE
T ss_pred CCEEEEEEE
Confidence 999977653
No 156
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.05 E-value=9.2e-10 Score=85.52 Aligned_cols=85 Identities=13% Similarity=0.069 Sum_probs=57.7
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcc------c-------------c--c---CCCCCCCeeEEE
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVND------D-------------L--S---RNVNPSSVDVVT 126 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~------~-------------~--~---~~~~~~~fD~ii 126 (231)
.++.+|||||||+|.++..++.. ..++++|+++. . + . ..+++++||+|+
T Consensus 73 ~~g~~VLDlGcGtG~~s~~la~~-------~~V~gvD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~~~~fD~V~ 145 (265)
T 2oxt_A 73 ELTGRVVDLGCGRGGWSYYAASR-------PHVMDVRAYTLGVGGHEVPRITESYGWNIVKFKSRVDIHTLPVERTDVIM 145 (265)
T ss_dssp CCCEEEEEESCTTSHHHHHHHTS-------TTEEEEEEECCCCSSCCCCCCCCBTTGGGEEEECSCCTTTSCCCCCSEEE
T ss_pred CCCCEEEEeCcCCCHHHHHHHHc-------CcEEEEECchhhhhhhhhhhhhhccCCCeEEEecccCHhHCCCCCCcEEE
Confidence 67889999999999999888744 13344554431 0 0 0 013467899999
Q ss_pred EeeeeeccCCCC---H--HHHHHHHHHhcCCCe--EEEEEeccC
Q 045799 127 LIFMLSAVSPKK---M--PLILQNIKAVLKPDG--YILVCDYAI 163 (231)
Q Consensus 127 ~~~~l~~~~~~~---~--~~~l~~~~~~Lk~gG--~l~i~~~~~ 163 (231)
+..+ ++.+... . ..++..+.++|+||| .+++..+.+
T Consensus 146 sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~~ 188 (265)
T 2oxt_A 146 CDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLCP 188 (265)
T ss_dssp ECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESCT
T ss_pred EeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCCC
Confidence 9876 4432111 1 137899999999999 999877663
No 157
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.04 E-value=5.3e-10 Score=87.54 Aligned_cols=106 Identities=13% Similarity=0.081 Sum_probs=71.6
Q ss_pred CCCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc-----------------------CCCCCCCeeEEE
Q 045799 70 NGNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS-----------------------RNVNPSSVDVVT 126 (231)
Q Consensus 70 ~~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~-----------------------~~~~~~~fD~ii 126 (231)
..++.+|||+|||+|.++..++.... ...+++++|+++.++. ..+++++||+|+
T Consensus 110 ~~~~~~VLDiG~G~G~~~~~la~~~~---~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~V~ 186 (277)
T 1o54_A 110 VKEGDRIIDTGVGSGAMCAVLARAVG---SSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGFDEKDVDALF 186 (277)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHTT---TTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCCSCCSEEEEE
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHhC---CCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHcccCCccCEEE
Confidence 35678999999999999988873210 0124455554432211 123557899999
Q ss_pred EeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeEEEeeCHHHHHHHHHHc
Q 045799 127 LIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYFSEDFLSTLFLEA 206 (231)
Q Consensus 127 ~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 206 (231)
+ +. .++..++.++.++|+|||.+++.+... -...++.+.|++.
T Consensus 187 ~-----~~--~~~~~~l~~~~~~L~pgG~l~~~~~~~------------------------------~~~~~~~~~l~~~ 229 (277)
T 1o54_A 187 L-----DV--PDPWNYIDKCWEALKGGGRFATVCPTT------------------------------NQVQETLKKLQEL 229 (277)
T ss_dssp E-----CC--SCGGGTHHHHHHHEEEEEEEEEEESSH------------------------------HHHHHHHHHHHHS
T ss_pred E-----CC--cCHHHHHHHHHHHcCCCCEEEEEeCCH------------------------------HHHHHHHHHHHHC
Confidence 8 33 567789999999999999999874221 0234667778889
Q ss_pred CceEEEEEE
Q 045799 207 GFSTVDINI 215 (231)
Q Consensus 207 Gf~~~~~~~ 215 (231)
||..+++..
T Consensus 230 gf~~~~~~~ 238 (277)
T 1o54_A 230 PFIRIEVWE 238 (277)
T ss_dssp SEEEEEEEC
T ss_pred CCceeEEEE
Confidence 998776543
No 158
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.03 E-value=3.2e-11 Score=103.66 Aligned_cols=85 Identities=13% Similarity=0.203 Sum_probs=61.9
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC-------------------------CCCCCCeeEE
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR-------------------------NVNPSSVDVV 125 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~-------------------------~~~~~~fD~i 125 (231)
..+.+|||||||+|.++..|+.. +.+++++|+++.++.. .+.+++||+|
T Consensus 65 ~~~~~vLDvGCG~G~~~~~la~~------ga~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v 138 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLSLASK------GATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLA 138 (569)
T ss_dssp TSCCEEEEETCTTSHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEE
T ss_pred CCCCeEEEECCCCcHHHHHHHhC------CCEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEE
Confidence 45689999999999999999855 4577888888766531 2356799999
Q ss_pred EEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEec
Q 045799 126 TLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDY 161 (231)
Q Consensus 126 i~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~ 161 (231)
+|..+++|+++.+....+..+.+.|+++|..++...
T Consensus 139 ~~~e~~ehv~~~~~~~~~~~~~~tl~~~~~~~~~~~ 174 (569)
T 4azs_A 139 IGLSVFHHIVHLHGIDEVKRLLSRLADVTQAVILEL 174 (569)
T ss_dssp EEESCHHHHHHHHCHHHHHHHHHHHHHHSSEEEEEC
T ss_pred EECcchhcCCCHHHHHHHHHHHHHhccccceeeEEe
Confidence 999999999422222334567777877777666543
No 159
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.03 E-value=3.7e-11 Score=97.05 Aligned_cols=88 Identities=19% Similarity=0.284 Sum_probs=64.7
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC--------------------CCCCCCeeEEEEeee
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR--------------------NVNPSSVDVVTLIFM 130 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~--------------------~~~~~~fD~ii~~~~ 130 (231)
.++.+|||+|||+|.++..++... ...+++++|++..++.. ...+++||+|++..+
T Consensus 195 ~~~~~VLDlGcG~G~~~~~la~~~----~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~~~~~fD~Iv~~~~ 270 (343)
T 2pjd_A 195 HTKGKVLDVGCGAGVLSVAFARHS----PKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFSEVKGRFDMIISNPP 270 (343)
T ss_dssp TCCSBCCBTTCTTSHHHHHHHHHC----TTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTCCSCEEEEEECCC
T ss_pred CCCCeEEEecCccCHHHHHHHHHC----CCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEccccccccCCeeEEEECCC
Confidence 346799999999999999887432 12355677766544321 223678999999999
Q ss_pred eecc---CCCCHHHHHHHHHHhcCCCeEEEEEecc
Q 045799 131 LSAV---SPKKMPLILQNIKAVLKPDGYILVCDYA 162 (231)
Q Consensus 131 l~~~---~~~~~~~~l~~~~~~Lk~gG~l~i~~~~ 162 (231)
+|+. ..++...++++++++|+|||.+++....
T Consensus 271 ~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 305 (343)
T 2pjd_A 271 FHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANA 305 (343)
T ss_dssp CCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEET
T ss_pred cccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEcC
Confidence 8852 2256788999999999999999987543
No 160
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.03 E-value=2.5e-10 Score=87.26 Aligned_cols=86 Identities=13% Similarity=0.152 Sum_probs=55.2
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc------------------------------CC--CC
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS------------------------------RN--VN 118 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~------------------------------~~--~~ 118 (231)
.++.+|||||||+|.++..++.... ...++++|++..++. .+ ++
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p----~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~ 120 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFP----DTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFY 120 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGST----TSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCC
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCC----CCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCC
Confidence 5667899999999999999883311 224455555432210 01 45
Q ss_pred CCCeeEEEEeeeeeccC------CCCHHHHHHHHHHhcCCCeEEEEEe
Q 045799 119 PSSVDVVTLIFMLSAVS------PKKMPLILQNIKAVLKPDGYILVCD 160 (231)
Q Consensus 119 ~~~fD~ii~~~~l~~~~------~~~~~~~l~~~~~~Lk~gG~l~i~~ 160 (231)
+++||.|++.+.-.+.. +-....++++++++|||||.+++..
T Consensus 121 ~~~~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~t 168 (235)
T 3ckk_A 121 KGQLTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTIT 168 (235)
T ss_dssp TTCEEEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred CcCeeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEe
Confidence 78999998754322220 0011479999999999999999874
No 161
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.01 E-value=3.3e-10 Score=91.34 Aligned_cols=79 Identities=23% Similarity=0.250 Sum_probs=58.2
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc------------------------CCCCCCCeeEEE
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS------------------------RNVNPSSVDVVT 126 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~------------------------~~~~~~~fD~ii 126 (231)
.++.+|||||||+|.++..++... ..+++++|+++ ++. .++++++||+|+
T Consensus 63 ~~~~~VLDiGcGtG~ls~~la~~g-----~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv 136 (340)
T 2fyt_A 63 FKDKVVLDVGCGTGILSMFAAKAG-----AKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVEKVDVII 136 (340)
T ss_dssp TTTCEEEEETCTTSHHHHHHHHTT-----CSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCSCEEEEE
T ss_pred cCCCEEEEeeccCcHHHHHHHHcC-----CCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCCCcEEEEE
Confidence 567899999999999998887431 12456666653 221 134567999999
Q ss_pred Eeee---eeccCCCCHHHHHHHHHHhcCCCeEEE
Q 045799 127 LIFM---LSAVSPKKMPLILQNIKAVLKPDGYIL 157 (231)
Q Consensus 127 ~~~~---l~~~~~~~~~~~l~~~~~~Lk~gG~l~ 157 (231)
+..+ +.+. ..+..++.++.++|||||.++
T Consensus 137 s~~~~~~l~~~--~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 137 SEWMGYFLLFE--SMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp ECCCBTTBTTT--CHHHHHHHHHHHHEEEEEEEE
T ss_pred EcCchhhccCH--HHHHHHHHHHHhhcCCCcEEE
Confidence 8764 3333 667889999999999999997
No 162
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=99.00 E-value=1.2e-09 Score=88.50 Aligned_cols=144 Identities=16% Similarity=0.171 Sum_probs=92.0
Q ss_pred CCeEEEEcCCCCcchHHHhcC------ccc-------cccceeeeeecCCcccc--------------------------
Q 045799 73 PKVVLEVGCGAGNTIFPLVSH------SEF-------REERVNAFVCNVVNDDL-------------------------- 113 (231)
Q Consensus 73 ~~~iLdvGcG~G~~~~~l~~~------~~~-------~~~~~~~~~~D~~~~~~-------------------------- 113 (231)
..+|+|+||++|.++..++.. ..+ ....++++..|+...++
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f 132 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCL 132 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceE
Confidence 588999999999999888721 111 23467788888763333
Q ss_pred ---------cCCCCCCCeeEEEEeeeeeccC--CCCH-----------------------------------HHHHHHHH
Q 045799 114 ---------SRNVNPSSVDVVTLIFMLSAVS--PKKM-----------------------------------PLILQNIK 147 (231)
Q Consensus 114 ---------~~~~~~~~fD~ii~~~~l~~~~--~~~~-----------------------------------~~~l~~~~ 147 (231)
...|+++++|+|+++.+||+++ ++.. ..+|+..+
T Consensus 133 ~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~Ra 212 (384)
T 2efj_A 133 IGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIHS 212 (384)
T ss_dssp EEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1246889999999999999985 2121 12377779
Q ss_pred HhcCCCeEEEEEeccCCch--hhh---hhhccc-----c-ccccceEEeCCCeEEEeeCHHHHHHHHHHc-CceEEEEEE
Q 045799 148 AVLKPDGYILVCDYAIGDF--AQV---KLLDRN-----Q-MIGDSFYVRGDGTCSFYFSEDFLSTLFLEA-GFSTVDINI 215 (231)
Q Consensus 148 ~~Lk~gG~l~i~~~~~~~~--~~~---~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-Gf~~~~~~~ 215 (231)
+.|+|||.+++...+..+. ... .+.... . .+.+.- ...-....++.+.+++..+++++ +|++..++.
T Consensus 213 ~eL~pGG~mvl~~~gr~~~~~~~~~~~~l~~al~~lv~eGli~~ek-~dsf~~P~y~ps~~E~~~~le~~g~F~i~~le~ 291 (384)
T 2efj_A 213 EELISRGRMLLTFICKEDEFDHPNSMDLLEMSINDLVIEGHLEEEK-LDSFNVPIYAPSTEEVKRIVEEEGSFEILYLET 291 (384)
T ss_dssp HHEEEEEEEEEEEECCCTTTCCCCHHHHHHHHHHHHHHHTSSCHHH-HHTCCCSBCCCCHHHHHHHHHHHCSEEEEEEEE
T ss_pred HHhccCCeEEEEEecCCCcccCcccHHHHHHHHHHHHHhCCcchhh-hcccCCcccCCCHHHHHHHHHHcCCceEEEEEE
Confidence 9999999999987776554 200 000000 0 000000 00011123468999999999998 589999877
Q ss_pred Ee
Q 045799 216 HL 217 (231)
Q Consensus 216 ~~ 217 (231)
..
T Consensus 292 ~~ 293 (384)
T 2efj_A 292 FN 293 (384)
T ss_dssp EE
T ss_pred Ee
Confidence 64
No 163
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.00 E-value=6.3e-10 Score=84.86 Aligned_cols=122 Identities=8% Similarity=0.090 Sum_probs=81.6
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC---------------------CCCCCCeeEEEEee
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR---------------------NVNPSSVDVVTLIF 129 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~---------------------~~~~~~fD~ii~~~ 129 (231)
....+|||||||+|.++..++... ....+.++|+.+.+++. ..+.++||++++.-
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~~----p~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~~p~~~~DvaL~lk 206 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGLP----AETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDRLDEPADVTLLLK 206 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTCC----TTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSCCCSCCSEEEETT
T ss_pred CCCceeeeeccCccHHHHHHHhhC----CCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecccCCCCCcchHHHHH
Confidence 457899999999999998887432 24467788888776542 33568999999999
Q ss_pred eeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeEEEeeCHHHHHHHHHHcCce
Q 045799 130 MLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYFSEDFLSTLFLEAGFS 209 (231)
Q Consensus 130 ~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~ 209 (231)
+++|+..+.....+ ++.+.|+++|+++--+.-.-.-. ...+... | ...|.+.+.+.|+.
T Consensus 207 ti~~Le~q~kg~g~-~ll~aL~~~~vvVSfp~ksl~Gr-------s~gm~~~------------Y-~~~~e~~~~~~g~~ 265 (281)
T 3lcv_B 207 TLPCLETQQRGSGW-EVIDIVNSPNIVVTFPTKSLGQR-------SKGMFQN------------Y-SQSFESQARERSCR 265 (281)
T ss_dssp CHHHHHHHSTTHHH-HHHHHSSCSEEEEEEECC--------------CHHHH------------H-HHHHHHHHHHHTCC
T ss_pred HHHHhhhhhhHHHH-HHHHHhCCCCEEEeccchhhcCC-------CcchhhH------------H-HHHHHHHHHhcCCc
Confidence 99999644445666 99999999999876532110000 0011111 1 24788888888986
Q ss_pred EEEEEEEe
Q 045799 210 TVDINIHL 217 (231)
Q Consensus 210 ~~~~~~~~ 217 (231)
+.++...+
T Consensus 266 ~~~~~~~n 273 (281)
T 3lcv_B 266 IQRLEIGN 273 (281)
T ss_dssp EEEEEETT
T ss_pred eeeeeecC
Confidence 66654433
No 164
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=98.99 E-value=3.9e-10 Score=85.76 Aligned_cols=79 Identities=14% Similarity=0.059 Sum_probs=55.8
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc--------------------C-CCCCCCeeEEEEee
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS--------------------R-NVNPSSVDVVTLIF 129 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~--------------------~-~~~~~~fD~ii~~~ 129 (231)
.++.+|||+|||+|.++..++... .+++++|+++.++. . ...+++||+|++..
T Consensus 69 ~~~~~vLdiG~G~G~~~~~l~~~~------~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~ 142 (231)
T 1vbf_A 69 HKGQKVLEIGTGIGYYTALIAEIV------DKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYEEEKPYDRVVVWA 142 (231)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHS------SEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCGGGCCEEEEEESS
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHc------CEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCcccccccCCCccEEEECC
Confidence 667899999999999998887321 13334443322110 0 11357899999999
Q ss_pred eeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccC
Q 045799 130 MLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAI 163 (231)
Q Consensus 130 ~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~ 163 (231)
+++|++ .++.++|+|||.+++.....
T Consensus 143 ~~~~~~--------~~~~~~L~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 143 TAPTLL--------CKPYEQLKEGGIMILPIGVG 168 (231)
T ss_dssp BBSSCC--------HHHHHTEEEEEEEEEEECSS
T ss_pred cHHHHH--------HHHHHHcCCCcEEEEEEcCC
Confidence 999984 36889999999999986443
No 165
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=98.99 E-value=1.5e-09 Score=83.80 Aligned_cols=105 Identities=20% Similarity=0.149 Sum_probs=71.0
Q ss_pred CCCCCeEEEEcCCCCcchHHHhcCc-c-c-----------------------cccceeeeeecCCcccccCCCCCCCeeE
Q 045799 70 NGNPKVVLEVGCGAGNTIFPLVSHS-E-F-----------------------REERVNAFVCNVVNDDLSRNVNPSSVDV 124 (231)
Q Consensus 70 ~~~~~~iLdvGcG~G~~~~~l~~~~-~-~-----------------------~~~~~~~~~~D~~~~~~~~~~~~~~fD~ 124 (231)
..++.+|||+|||+|.++..++... . . ...++.+...|+... ++++++||+
T Consensus 94 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~----~~~~~~~D~ 169 (258)
T 2pwy_A 94 LAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEA----ELEEAAYDG 169 (258)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGC----CCCTTCEEE
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhc----CCCCCCcCE
Confidence 3678899999999999998887321 0 0 001233333333211 356678999
Q ss_pred EEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeEEEeeCHHHHHHHHH
Q 045799 125 VTLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYFSEDFLSTLFL 204 (231)
Q Consensus 125 ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 204 (231)
|++ +. .++..+++++.++|+|||.+++.+... -...++.+.++
T Consensus 170 v~~-----~~--~~~~~~l~~~~~~L~~gG~l~~~~~~~------------------------------~~~~~~~~~l~ 212 (258)
T 2pwy_A 170 VAL-----DL--MEPWKVLEKAALALKPDRFLVAYLPNI------------------------------TQVLELVRAAE 212 (258)
T ss_dssp EEE-----ES--SCGGGGHHHHHHHEEEEEEEEEEESCH------------------------------HHHHHHHHHHT
T ss_pred EEE-----CC--cCHHHHHHHHHHhCCCCCEEEEEeCCH------------------------------HHHHHHHHHHH
Confidence 998 34 567789999999999999999875221 02346677788
Q ss_pred HcCceEEEEEE
Q 045799 205 EAGFSTVDINI 215 (231)
Q Consensus 205 ~~Gf~~~~~~~ 215 (231)
+.||..+++..
T Consensus 213 ~~gf~~~~~~~ 223 (258)
T 2pwy_A 213 AHPFRLERVLE 223 (258)
T ss_dssp TTTEEEEEEEE
T ss_pred HCCCceEEEEE
Confidence 89998777654
No 166
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=98.99 E-value=3.2e-12 Score=98.09 Aligned_cols=80 Identities=16% Similarity=0.226 Sum_probs=60.7
Q ss_pred CCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC-----------------------CCCCCCeeEEEEe
Q 045799 72 NPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR-----------------------NVNPSSVDVVTLI 128 (231)
Q Consensus 72 ~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~-----------------------~~~~~~fD~ii~~ 128 (231)
++.+|||+|||+|.++..++.. +.+++++|+++.++.. ..++++||+|++.
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~ 151 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALT------GMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLASFLKADVVFLS 151 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHGGGCCCSEEEEC
T ss_pred CCCEEEECccccCHHHHHHHHc------CCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhcccCCCCEEEEC
Confidence 6789999999999999999844 2355666666544321 1145799999999
Q ss_pred eeeeccCCCCHHHHHHHHHHhcCCCeEEEEE
Q 045799 129 FMLSAVSPKKMPLILQNIKAVLKPDGYILVC 159 (231)
Q Consensus 129 ~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~ 159 (231)
..+++. .+....+.+++++|+|||.+++.
T Consensus 152 ~~~~~~--~~~~~~~~~~~~~L~pgG~~i~~ 180 (241)
T 3gdh_A 152 PPWGGP--DYATAETFDIRTMMSPDGFEIFR 180 (241)
T ss_dssp CCCSSG--GGGGSSSBCTTTSCSSCHHHHHH
T ss_pred CCcCCc--chhhhHHHHHHhhcCCcceeHHH
Confidence 999988 55555777899999999996654
No 167
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=98.99 E-value=4e-10 Score=84.79 Aligned_cols=81 Identities=15% Similarity=0.052 Sum_probs=57.7
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc----------------------CCCC-CCCeeEEEE
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS----------------------RNVN-PSSVDVVTL 127 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~----------------------~~~~-~~~fD~ii~ 127 (231)
.++.+|||+|||+|.++..++.... ...+++++|+++.++. ..++ +++||+|++
T Consensus 76 ~~~~~vLdiG~G~G~~~~~l~~~~~---~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~ 152 (215)
T 2yxe_A 76 KPGMKVLEIGTGCGYHAAVTAEIVG---EDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYEPLAPYDRIYT 152 (215)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHC---TTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCGGGCCEEEEEE
T ss_pred CCCCEEEEECCCccHHHHHHHHHhC---CCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCCCCCeeEEEE
Confidence 6778999999999999988873320 0124455555433221 1222 568999999
Q ss_pred eeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEecc
Q 045799 128 IFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYA 162 (231)
Q Consensus 128 ~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~ 162 (231)
..+++|++ .++.++|+|||.+++....
T Consensus 153 ~~~~~~~~--------~~~~~~L~pgG~lv~~~~~ 179 (215)
T 2yxe_A 153 TAAGPKIP--------EPLIRQLKDGGKLLMPVGR 179 (215)
T ss_dssp SSBBSSCC--------HHHHHTEEEEEEEEEEESS
T ss_pred CCchHHHH--------HHHHHHcCCCcEEEEEECC
Confidence 99999984 3789999999999987543
No 168
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=98.98 E-value=4.5e-09 Score=79.68 Aligned_cols=85 Identities=19% Similarity=0.230 Sum_probs=53.8
Q ss_pred CCCCCeEEEEcCCCCcchHHHhcCcc--c-------c-------------ccceeeeeecCCcccccCCCCCCCeeEEEE
Q 045799 70 NGNPKVVLEVGCGAGNTIFPLVSHSE--F-------R-------------EERVNAFVCNVVNDDLSRNVNPSSVDVVTL 127 (231)
Q Consensus 70 ~~~~~~iLdvGcG~G~~~~~l~~~~~--~-------~-------------~~~~~~~~~D~~~~~~~~~~~~~~fD~ii~ 127 (231)
..++.+|||+|||+|.++..++.... . + ..++.+...|+.......+ ..++||+|++
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~-~~~~~D~v~~ 149 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRA-LVPKVDVIFE 149 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTT-TCCCEEEEEE
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchhhc-ccCCceEEEE
Confidence 36778999999999999988873210 0 0 0123333444432111011 1358999997
Q ss_pred eeeeeccCCCCHHHHHHHHHHhcCCCeEEEEE
Q 045799 128 IFMLSAVSPKKMPLILQNIKAVLKPDGYILVC 159 (231)
Q Consensus 128 ~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~ 159 (231)
... .+.....++.++.+.|||||.+++.
T Consensus 150 ~~~----~~~~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 150 DVA----QPTQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp CCC----STTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCC----CHhHHHHHHHHHHHhcCCCCEEEEE
Confidence 543 1233445599999999999999887
No 169
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=98.98 E-value=3.6e-10 Score=81.69 Aligned_cols=84 Identities=8% Similarity=0.053 Sum_probs=58.4
Q ss_pred CCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC------------------------CC--CCCCeeEE
Q 045799 72 NPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR------------------------NV--NPSSVDVV 125 (231)
Q Consensus 72 ~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~------------------------~~--~~~~fD~i 125 (231)
++.+|||+|||+|.++..++... ..++++|+++.++.. .. .+++||+|
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~------~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i 114 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEG------WEAVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVA 114 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTT------CEEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHHCC------CeEEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEE
Confidence 67899999999999999887441 125677776544311 00 12479999
Q ss_pred EEeeeeeccCCCCHHHHHHHHH--HhcCCCeEEEEEeccCCc
Q 045799 126 TLIFMLSAVSPKKMPLILQNIK--AVLKPDGYILVCDYAIGD 165 (231)
Q Consensus 126 i~~~~l~~~~~~~~~~~l~~~~--~~Lk~gG~l~i~~~~~~~ 165 (231)
++...++ .....+++.+. ++|+|||.+++.......
T Consensus 115 ~~~~~~~----~~~~~~~~~~~~~~~L~~gG~~~~~~~~~~~ 152 (171)
T 1ws6_A 115 FMAPPYA----MDLAALFGELLASGLVEAGGLYVLQHPKDLY 152 (171)
T ss_dssp EECCCTT----SCTTHHHHHHHHHTCEEEEEEEEEEEETTSC
T ss_pred EECCCCc----hhHHHHHHHHHhhcccCCCcEEEEEeCCccC
Confidence 9987665 23445666666 999999999987655543
No 170
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=98.98 E-value=2.3e-09 Score=79.28 Aligned_cols=89 Identities=15% Similarity=0.105 Sum_probs=59.4
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC-------CC-------------C---CCCeeEEEE
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR-------NV-------------N---PSSVDVVTL 127 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~-------~~-------------~---~~~fD~ii~ 127 (231)
.++.+|||+|||+|.++..++.. ...++++|+++..... .+ . .++||+|++
T Consensus 24 ~~g~~VLDlG~G~G~~s~~la~~------~~~V~gvD~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~D~Vls 97 (191)
T 3dou_A 24 RKGDAVIEIGSSPGGWTQVLNSL------ARKIISIDLQEMEEIAGVRFIRCDIFKETIFDDIDRALREEGIEKVDDVVS 97 (191)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTT------CSEEEEEESSCCCCCTTCEEEECCTTSSSHHHHHHHHHHHHTCSSEEEEEE
T ss_pred CCCCEEEEEeecCCHHHHHHHHc------CCcEEEEeccccccCCCeEEEEccccCHHHHHHHHHHhhcccCCcceEEec
Confidence 67899999999999999988754 2356677776532100 00 0 148999999
Q ss_pred eeeeeccCC---------CCHHHHHHHHHHhcCCCeEEEEEeccCCc
Q 045799 128 IFMLSAVSP---------KKMPLILQNIKAVLKPDGYILVCDYAIGD 165 (231)
Q Consensus 128 ~~~l~~~~~---------~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~ 165 (231)
......... +....+++.+.++|||||.+++..+....
T Consensus 98 d~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~~ 144 (191)
T 3dou_A 98 DAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGDM 144 (191)
T ss_dssp CCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTH
T ss_pred CCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCCC
Confidence 653221100 11356788999999999999987655443
No 171
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=98.98 E-value=4e-10 Score=91.16 Aligned_cols=82 Identities=23% Similarity=0.310 Sum_probs=61.7
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc------------------------CCCCCCCeeEEE
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS------------------------RNVNPSSVDVVT 126 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~------------------------~~~~~~~fD~ii 126 (231)
.++.+|||||||+|.++..++... ..+++++|+++ +.. .++ .++||+|+
T Consensus 49 ~~~~~VLDiGcGtG~ls~~la~~g-----~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~-~~~~D~Iv 121 (348)
T 2y1w_A 49 FKDKIVLDVGCGSGILSFFAAQAG-----ARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSL-PEQVDIII 121 (348)
T ss_dssp TTTCEEEEETCTTSHHHHHHHHTT-----CSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCC-SSCEEEEE
T ss_pred CCcCEEEEcCCCccHHHHHHHhCC-----CCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCCC-CCceeEEE
Confidence 467899999999999998887431 12455666553 211 011 26899999
Q ss_pred EeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEE
Q 045799 127 LIFMLSAVSPKKMPLILQNIKAVLKPDGYILVC 159 (231)
Q Consensus 127 ~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~ 159 (231)
+..+++|+..+.....+..+.+.|+|||.+++.
T Consensus 122 s~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 122 SEPMGYMLFNERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp ECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESC
T ss_pred EeCchhcCChHHHHHHHHHHHhhcCCCeEEEEe
Confidence 999988887677888899999999999999854
No 172
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=98.97 E-value=4.2e-10 Score=83.95 Aligned_cols=84 Identities=17% Similarity=0.115 Sum_probs=58.1
Q ss_pred CCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc---------------------------CCCCCCC-ee
Q 045799 72 NPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS---------------------------RNVNPSS-VD 123 (231)
Q Consensus 72 ~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~---------------------------~~~~~~~-fD 123 (231)
++.+|||+|||+|.++..++.... ..++++|+++.++. ..+++++ ||
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~-----~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD 127 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQA-----KKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFD 127 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTC-----SEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEE
T ss_pred CCCeEEEcCCccCHHHHHHHHccC-----CEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCC
Confidence 467999999999999988663311 13455555543321 0113568 99
Q ss_pred EEEEeeeeeccCCCCHHHHHHHH--HHhcCCCeEEEEEeccC
Q 045799 124 VVTLIFMLSAVSPKKMPLILQNI--KAVLKPDGYILVCDYAI 163 (231)
Q Consensus 124 ~ii~~~~l~~~~~~~~~~~l~~~--~~~Lk~gG~l~i~~~~~ 163 (231)
+|++...++ . .+...+++.+ .++|+|||.+++.....
T Consensus 128 ~I~~~~~~~-~--~~~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 128 VVFLDPPFH-F--NLAEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp EEEECCCSS-S--CHHHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred EEEECCCCC-C--ccHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 999987744 3 6678889988 56799999999876444
No 173
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=98.97 E-value=3.8e-10 Score=85.41 Aligned_cols=87 Identities=16% Similarity=0.215 Sum_probs=61.1
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC--------------------------CCC----CC
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR--------------------------NVN----PS 120 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~--------------------------~~~----~~ 120 (231)
.++.+|||||||+|..+..++.... .+.+++++|+++.++.. .+. .+
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~---~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~ 133 (221)
T 3u81_A 57 YSPSLVLELGAYCGYSAVRMARLLQ---PGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVD 133 (221)
T ss_dssp HCCSEEEEECCTTSHHHHHHHTTSC---TTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCC
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCC---CCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCC
Confidence 4568999999999999999984321 12355666666544321 111 26
Q ss_pred CeeEEEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccC
Q 045799 121 SVDVVTLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAI 163 (231)
Q Consensus 121 ~fD~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~ 163 (231)
+||+|++....++. .....++..+ ++|+|||++++.+...
T Consensus 134 ~fD~V~~d~~~~~~--~~~~~~~~~~-~~LkpgG~lv~~~~~~ 173 (221)
T 3u81_A 134 TLDMVFLDHWKDRY--LPDTLLLEKC-GLLRKGTVLLADNVIV 173 (221)
T ss_dssp CCSEEEECSCGGGH--HHHHHHHHHT-TCCCTTCEEEESCCCC
T ss_pred ceEEEEEcCCcccc--hHHHHHHHhc-cccCCCeEEEEeCCCC
Confidence 89999998877766 4455677777 9999999999876443
No 174
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=98.97 E-value=8.4e-10 Score=88.52 Aligned_cols=82 Identities=21% Similarity=0.255 Sum_probs=59.0
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc------------------------CCCCCCCeeEEE
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS------------------------RNVNPSSVDVVT 126 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~------------------------~~~~~~~fD~ii 126 (231)
.++.+|||||||+|.++..++... ..+++++|++ .++. .++++++||+|+
T Consensus 37 ~~~~~VLDiGcGtG~ls~~la~~g-----~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv 110 (328)
T 1g6q_1 37 FKDKIVLDVGCGTGILSMFAAKHG-----AKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDIII 110 (328)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHTC-----CSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEEE
T ss_pred cCCCEEEEecCccHHHHHHHHHCC-----CCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhccCCCCcccEEE
Confidence 456899999999999998887431 1245666665 2221 134557899999
Q ss_pred EeeeeeccC-CCCHHHHHHHHHHhcCCCeEEEE
Q 045799 127 LIFMLSAVS-PKKMPLILQNIKAVLKPDGYILV 158 (231)
Q Consensus 127 ~~~~l~~~~-~~~~~~~l~~~~~~Lk~gG~l~i 158 (231)
+..+.+++. ...+..++..+.+.|+|||.++.
T Consensus 111 s~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 111 SEWMGYFLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp ECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred EeCchhhcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 976544442 36788999999999999999973
No 175
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=98.97 E-value=9.7e-10 Score=86.67 Aligned_cols=86 Identities=19% Similarity=0.251 Sum_probs=55.7
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC-----------------------------CCCCCC
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR-----------------------------NVNPSS 121 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~-----------------------------~~~~~~ 121 (231)
+++.+|||||||+|..+..++.... ..+++++|+++.++.. ...+++
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~----~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~ 157 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKN----VESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQT 157 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTT----CCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCC
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCC----CCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCC
Confidence 4568999999999999999985421 2244556655433210 113578
Q ss_pred eeEEEEeeeeeccCCCCH--HHHHHHHHHhcCCCeEEEEEe
Q 045799 122 VDVVTLIFMLSAVSPKKM--PLILQNIKAVLKPDGYILVCD 160 (231)
Q Consensus 122 fD~ii~~~~l~~~~~~~~--~~~l~~~~~~Lk~gG~l~i~~ 160 (231)
||+|++.......+.... ..+++.++++|+|||++++..
T Consensus 158 fDvIi~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 198 (294)
T 3adn_A 158 FDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp EEEEEECC----------CCHHHHHHHHHTEEEEEEEEEEE
T ss_pred ccEEEECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEec
Confidence 999999654333322222 789999999999999998864
No 176
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=98.97 E-value=1.4e-09 Score=87.24 Aligned_cols=83 Identities=16% Similarity=0.197 Sum_probs=58.5
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC-----------------------C-C-----CCCC
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR-----------------------N-V-----NPSS 121 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~-----------------------~-~-----~~~~ 121 (231)
.++.+|||+|||+|.++..++.. +.+++++|+++.++.. . . .+++
T Consensus 152 ~~~~~VLDlgcGtG~~sl~la~~------ga~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~ 225 (332)
T 2igt_A 152 DRPLKVLNLFGYTGVASLVAAAA------GAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGST 225 (332)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHT------TCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCC
T ss_pred CCCCcEEEcccccCHHHHHHHHc------CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCC
Confidence 45679999999999999998843 2255667766544321 0 0 1468
Q ss_pred eeEEEEee----------eeeccCCCCHHHHHHHHHHhcCCCeEEEEEec
Q 045799 122 VDVVTLIF----------MLSAVSPKKMPLILQNIKAVLKPDGYILVCDY 161 (231)
Q Consensus 122 fD~ii~~~----------~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~ 161 (231)
||+|++.- ++++. ++...++..+.++|+|||.+++...
T Consensus 226 fD~Ii~dPP~~~~~~~~~~~~~~--~~~~~ll~~~~~~LkpgG~lli~~~ 273 (332)
T 2igt_A 226 YDIILTDPPKFGRGTHGEVWQLF--DHLPLMLDICREILSPKALGLVLTA 273 (332)
T ss_dssp BSEEEECCCSEEECTTCCEEEHH--HHHHHHHHHHHHTBCTTCCEEEEEE
T ss_pred ceEEEECCccccCCchHHHHHHH--HHHHHHHHHHHHhcCcCcEEEEEEC
Confidence 99999932 22333 4578899999999999999877643
No 177
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=98.96 E-value=4.4e-09 Score=81.55 Aligned_cols=89 Identities=12% Similarity=0.183 Sum_probs=57.3
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCcc--------------------c-----c--ccceeeeeecCCcccc---cCCCCCC
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSE--------------------F-----R--EERVNAFVCNVVNDDL---SRNVNPS 120 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~--------------------~-----~--~~~~~~~~~D~~~~~~---~~~~~~~ 120 (231)
.++.+|||+|||+|.++..++.... . . ..++.++..|+..... ...++++
T Consensus 35 ~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~ 114 (260)
T 2ozv_A 35 DRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPDE 114 (260)
T ss_dssp CSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCTT
T ss_pred cCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCCC
Confidence 5678999999999999988872210 0 0 0124555555543210 0124567
Q ss_pred CeeEEEEeeee----------------eccCCCCHHHHHHHHHHhcCCCeEEEEE
Q 045799 121 SVDVVTLIFML----------------SAVSPKKMPLILQNIKAVLKPDGYILVC 159 (231)
Q Consensus 121 ~fD~ii~~~~l----------------~~~~~~~~~~~l~~~~~~Lk~gG~l~i~ 159 (231)
+||+|+++-.+ .|........+++.+.++|+|||.+++.
T Consensus 115 ~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 169 (260)
T 2ozv_A 115 HFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLI 169 (260)
T ss_dssp CEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEE
T ss_pred CcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEE
Confidence 99999997221 1222345788999999999999999885
No 178
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=98.96 E-value=4.5e-10 Score=89.72 Aligned_cols=81 Identities=19% Similarity=0.112 Sum_probs=57.9
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC-----------------------CCCCCCeeEEEE
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR-----------------------NVNPSSVDVVTL 127 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~-----------------------~~~~~~fD~ii~ 127 (231)
.++.+|||||||+|.++..++.... ...+++++|+++.++.. ...+++||+|++
T Consensus 74 ~~~~~VLDiGcG~G~~~~~la~~~~---~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~~~~~fD~Iv~ 150 (317)
T 1dl5_A 74 DKGMRVLEIGGGTGYNAAVMSRVVG---EKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPEFSPYDVIFV 150 (317)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHC---TTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEE
T ss_pred CCcCEEEEecCCchHHHHHHHHhcC---CCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhccccCCCeEEEEE
Confidence 6788999999999999988873211 01234555555433210 113478999999
Q ss_pred eeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEecc
Q 045799 128 IFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYA 162 (231)
Q Consensus 128 ~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~ 162 (231)
..+++|++ +.+.+.|||||++++....
T Consensus 151 ~~~~~~~~--------~~~~~~LkpgG~lvi~~~~ 177 (317)
T 1dl5_A 151 TVGVDEVP--------ETWFTQLKEGGRVIVPINL 177 (317)
T ss_dssp CSBBSCCC--------HHHHHHEEEEEEEEEEBCB
T ss_pred cCCHHHHH--------HHHHHhcCCCcEEEEEECC
Confidence 99999984 5678999999999997543
No 179
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=98.95 E-value=1.4e-09 Score=86.64 Aligned_cols=115 Identities=12% Similarity=0.109 Sum_probs=71.2
Q ss_pred CCCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC-----------------------CCCCCCeeEEE
Q 045799 70 NGNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR-----------------------NVNPSSVDVVT 126 (231)
Q Consensus 70 ~~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~-----------------------~~~~~~fD~ii 126 (231)
..++.+|||+|||+|..+..++.... ....++++|++..++.. +..+++||+|+
T Consensus 116 ~~~g~~VLDlg~G~G~~t~~la~~~~---~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~~~~fD~Il 192 (315)
T 1ixk_A 116 PKPGEIVADMAAAPGGKTSYLAQLMR---NDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELNVEFDKIL 192 (315)
T ss_dssp CCTTCEEEECCSSCSHHHHHHHHHTT---TCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGGCCCEEEEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhC---CCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcccccccCCEEE
Confidence 36778999999999999998873211 01244555555443210 11246899999
Q ss_pred Eee------eeeccCCC--------------CHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeC
Q 045799 127 LIF------MLSAVSPK--------------KMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRG 186 (231)
Q Consensus 127 ~~~------~l~~~~~~--------------~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (231)
+.. ++++.|.. ....+++++.++|||||.+++++.+.....
T Consensus 193 ~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~~E------------------- 253 (315)
T 1ixk_A 193 LDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEPEE------------------- 253 (315)
T ss_dssp EECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCGGG-------------------
T ss_pred EeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCChHH-------------------
Confidence 842 23332210 025889999999999999998764432211
Q ss_pred CCeEEEeeCHHHHHHHHHHcCceEEEEE
Q 045799 187 DGTCSFYFSEDFLSTLFLEAGFSTVDIN 214 (231)
Q Consensus 187 ~~~~~~~~~~~~l~~~l~~~Gf~~~~~~ 214 (231)
....+...+++.||+++.+.
T Consensus 254 --------ne~~v~~~l~~~~~~~~~~~ 273 (315)
T 1ixk_A 254 --------NEFVIQWALDNFDVELLPLK 273 (315)
T ss_dssp --------THHHHHHHHHHSSEEEECCC
T ss_pred --------hHHHHHHHHhcCCCEEecCC
Confidence 23455666777787776553
No 180
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=98.95 E-value=1.6e-09 Score=82.81 Aligned_cols=85 Identities=9% Similarity=0.092 Sum_probs=58.3
Q ss_pred CCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC---------------------CC-CCCCeeEEEEee
Q 045799 72 NPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR---------------------NV-NPSSVDVVTLIF 129 (231)
Q Consensus 72 ~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~---------------------~~-~~~~fD~ii~~~ 129 (231)
++.+|||||||+|..+..++..........+++++|+++.++.. +. .+.+||+|++..
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I~~d~ 160 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPASDMENITLHQGDCSDLTTFEHLREMAHPLIFIDN 160 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGGGCTTEEEEECCSSCSGGGGGGSSSCSSEEEEES
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhccCCceEEEECcchhHHHHHhhccCCCCEEEECC
Confidence 45799999999999999887431000112355666666554321 11 123799999866
Q ss_pred eeeccCCCCHHHHHHHHHH-hcCCCeEEEEEec
Q 045799 130 MLSAVSPKKMPLILQNIKA-VLKPDGYILVCDY 161 (231)
Q Consensus 130 ~l~~~~~~~~~~~l~~~~~-~Lk~gG~l~i~~~ 161 (231)
. | .+...++.++.+ +|||||++++.+.
T Consensus 161 ~--~---~~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 161 A--H---ANTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp S--C---SSHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred c--h---HhHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 4 3 367889999997 9999999999764
No 181
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=98.95 E-value=1e-09 Score=81.90 Aligned_cols=84 Identities=11% Similarity=0.020 Sum_probs=59.0
Q ss_pred CCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC------------------------CCCCCCeeEEEE
Q 045799 72 NPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR------------------------NVNPSSVDVVTL 127 (231)
Q Consensus 72 ~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~------------------------~~~~~~fD~ii~ 127 (231)
++.+|||+|||+|.++..++.... .+++++|+++.++.. +..+++||+|++
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~~-----~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~ 128 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRYA-----AGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFV 128 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTC-----SEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHhcCC-----CEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEE
Confidence 468999999999999988663311 145566665544321 234578999998
Q ss_pred eeeeeccCCCCHHHHHHHHHH--hcCCCeEEEEEeccC
Q 045799 128 IFMLSAVSPKKMPLILQNIKA--VLKPDGYILVCDYAI 163 (231)
Q Consensus 128 ~~~l~~~~~~~~~~~l~~~~~--~Lk~gG~l~i~~~~~ 163 (231)
...++ . .....+++.+.+ +|+|||++++.....
T Consensus 129 ~~p~~-~--~~~~~~l~~l~~~~~L~pgG~l~i~~~~~ 163 (202)
T 2fpo_A 129 DPPFR-R--GLLEETINLLEDNGWLADEALIYVESEVE 163 (202)
T ss_dssp CCSSS-T--TTHHHHHHHHHHTTCEEEEEEEEEEEEGG
T ss_pred CCCCC-C--CcHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 76643 3 567788888876 499999999875443
No 182
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=98.94 E-value=9.3e-10 Score=83.91 Aligned_cols=83 Identities=17% Similarity=0.233 Sum_probs=59.3
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC-------------------------C-CCCCCeeE
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR-------------------------N-VNPSSVDV 124 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~-------------------------~-~~~~~fD~ 124 (231)
.++.+|||||||+|..+..++.... ..+++++|+++.++.. + ..+++||+
T Consensus 70 ~~~~~vLDiG~G~G~~~~~la~~~~----~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~ 145 (232)
T 3ntv_A 70 NNVKNILEIGTAIGYSSMQFASISD----DIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDM 145 (232)
T ss_dssp HTCCEEEEECCSSSHHHHHHHTTCT----TCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEE
T ss_pred cCCCEEEEEeCchhHHHHHHHHhCC----CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccE
Confidence 4578999999999999999985211 2355666665433210 1 12578999
Q ss_pred EEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEecc
Q 045799 125 VTLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYA 162 (231)
Q Consensus 125 ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~ 162 (231)
|++... ......+++.+.++|+|||++++.+..
T Consensus 146 V~~~~~-----~~~~~~~l~~~~~~LkpgG~lv~d~~~ 178 (232)
T 3ntv_A 146 IFIDAA-----KAQSKKFFEIYTPLLKHQGLVITDNVL 178 (232)
T ss_dssp EEEETT-----SSSHHHHHHHHGGGEEEEEEEEEECTT
T ss_pred EEEcCc-----HHHHHHHHHHHHHhcCCCeEEEEeeCC
Confidence 996532 367788999999999999999886543
No 183
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.93 E-value=1.5e-09 Score=84.84 Aligned_cols=86 Identities=16% Similarity=0.105 Sum_probs=57.9
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcc-------c------------c--c---CCCCCCCeeEEE
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVND-------D------------L--S---RNVNPSSVDVVT 126 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~-------~------------~--~---~~~~~~~fD~ii 126 (231)
.++.+|||+|||+|.++..++.. ..++++|+++. . + . ..+++++||+|+
T Consensus 81 ~~g~~VLDlGcGtG~~s~~la~~-------~~V~gVD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~~~~fD~Vv 153 (276)
T 2wa2_A 81 ELKGTVVDLGCGRGSWSYYAASQ-------PNVREVKAYTLGTSGHEKPRLVETFGWNLITFKSKVDVTKMEPFQADTVL 153 (276)
T ss_dssp CCCEEEEEESCTTCHHHHHHHTS-------TTEEEEEEECCCCTTSCCCCCCCCTTGGGEEEECSCCGGGCCCCCCSEEE
T ss_pred CCCCEEEEeccCCCHHHHHHHHc-------CCEEEEECchhhhhhhhchhhhhhcCCCeEEEeccCcHhhCCCCCcCEEE
Confidence 57889999999999999888744 13344444431 0 0 0 013467899999
Q ss_pred EeeeeeccCCC---CH--HHHHHHHHHhcCCCe--EEEEEeccCC
Q 045799 127 LIFMLSAVSPK---KM--PLILQNIKAVLKPDG--YILVCDYAIG 164 (231)
Q Consensus 127 ~~~~l~~~~~~---~~--~~~l~~~~~~Lk~gG--~l~i~~~~~~ 164 (231)
+..+ ++.+.. .. ..++..+.++||||| .+++..+.+.
T Consensus 154 sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~~~ 197 (276)
T 2wa2_A 154 CDIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLNPY 197 (276)
T ss_dssp ECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESCCC
T ss_pred ECCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCCCC
Confidence 9876 443211 11 137899999999999 9988776633
No 184
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=98.92 E-value=1.4e-09 Score=83.40 Aligned_cols=85 Identities=13% Similarity=0.162 Sum_probs=62.9
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC-------------------------C-C----CCC
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR-------------------------N-V----NPS 120 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~-------------------------~-~----~~~ 120 (231)
.++.+|||||||+|..+..++.... .+.+++++|+++.++.. + + .++
T Consensus 59 ~~~~~VLDiG~G~G~~t~~la~~~~---~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~ 135 (242)
T 3r3h_A 59 TRAKKVLELGTFTGYSALAMSLALP---DDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEH 135 (242)
T ss_dssp HTCSEEEEEESCCSHHHHHHHHTSC---TTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSS
T ss_pred cCcCEEEEeeCCcCHHHHHHHHhCC---CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCC
Confidence 4568999999999999999984321 13467788887765532 0 0 047
Q ss_pred CeeEEEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccC
Q 045799 121 SVDVVTLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAI 163 (231)
Q Consensus 121 ~fD~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~ 163 (231)
+||+|++... ..+...+++++.++|+|||++++.+...
T Consensus 136 ~fD~V~~d~~-----~~~~~~~l~~~~~~LkpGG~lv~d~~~~ 173 (242)
T 3r3h_A 136 QFDFIFIDAD-----KTNYLNYYELALKLVTPKGLIAIDNIFW 173 (242)
T ss_dssp CEEEEEEESC-----GGGHHHHHHHHHHHEEEEEEEEEECSSS
T ss_pred CEeEEEEcCC-----hHHhHHHHHHHHHhcCCCeEEEEECCcc
Confidence 8999998653 2567789999999999999999976543
No 185
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=98.91 E-value=7.8e-10 Score=81.16 Aligned_cols=87 Identities=14% Similarity=0.091 Sum_probs=60.7
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC----------------------------CCCCCCe
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR----------------------------NVNPSSV 122 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~----------------------------~~~~~~f 122 (231)
.++.+|||+|||+|.++..++... ..+++++|+++.++.. +..+++|
T Consensus 43 ~~~~~vLD~GcG~G~~~~~~~~~~-----~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~f 117 (187)
T 2fhp_A 43 FDGGMALDLYSGSGGLAIEAVSRG-----MDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQF 117 (187)
T ss_dssp CSSCEEEETTCTTCHHHHHHHHTT-----CSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCE
T ss_pred cCCCCEEEeCCccCHHHHHHHHcC-----CCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCC
Confidence 457899999999999998877421 1245666665543310 1126789
Q ss_pred eEEEEeeeeeccCCCCHHHHHHHH--HHhcCCCeEEEEEeccCCc
Q 045799 123 DVVTLIFMLSAVSPKKMPLILQNI--KAVLKPDGYILVCDYAIGD 165 (231)
Q Consensus 123 D~ii~~~~l~~~~~~~~~~~l~~~--~~~Lk~gG~l~i~~~~~~~ 165 (231)
|+|++...++ . ......++.+ .++|+|||.+++.......
T Consensus 118 D~i~~~~~~~-~--~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~~ 159 (187)
T 2fhp_A 118 DLVLLDPPYA-K--QEIVSQLEKMLERQLLTNEAVIVCETDKTVK 159 (187)
T ss_dssp EEEEECCCGG-G--CCHHHHHHHHHHTTCEEEEEEEEEEEETTCC
T ss_pred CEEEECCCCC-c--hhHHHHHHHHHHhcccCCCCEEEEEeCCccc
Confidence 9999987644 2 4567777877 8889999999987654433
No 186
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=98.91 E-value=7.6e-10 Score=80.67 Aligned_cols=87 Identities=14% Similarity=0.070 Sum_probs=60.1
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC-------------------------CCCCCCeeEE
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR-------------------------NVNPSSVDVV 125 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~-------------------------~~~~~~fD~i 125 (231)
.++.+|||+|||+|.++..++... ..+++++|+++.++.. +..+++||+|
T Consensus 30 ~~~~~vLDlGcG~G~~~~~l~~~~-----~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i 104 (177)
T 2esr_A 30 FNGGRVLDLFAGSGGLAIEAVSRG-----MSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLV 104 (177)
T ss_dssp CCSCEEEEETCTTCHHHHHHHHTT-----CCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEE
T ss_pred cCCCeEEEeCCCCCHHHHHHHHcC-----CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEE
Confidence 457899999999999998887441 1255667766543211 1123579999
Q ss_pred EEeeeeeccCCCCHHHHHHHHH--HhcCCCeEEEEEeccCCc
Q 045799 126 TLIFMLSAVSPKKMPLILQNIK--AVLKPDGYILVCDYAIGD 165 (231)
Q Consensus 126 i~~~~l~~~~~~~~~~~l~~~~--~~Lk~gG~l~i~~~~~~~ 165 (231)
++...++. .....+++.+. ++|+|||++++.......
T Consensus 105 ~~~~~~~~---~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~~ 143 (177)
T 2esr_A 105 FLDPPYAK---ETIVATIEALAAKNLLSEQVMVVCETDKTVL 143 (177)
T ss_dssp EECCSSHH---HHHHHHHHHHHHTTCEEEEEEEEEEEETTCC
T ss_pred EECCCCCc---chHHHHHHHHHhCCCcCCCcEEEEEECCccc
Confidence 99765532 34566777777 999999999997655443
No 187
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=98.90 E-value=4e-09 Score=84.85 Aligned_cols=148 Identities=14% Similarity=0.173 Sum_probs=94.1
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCc-----------cc-cccceeeeeecCCccccc------------------------
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHS-----------EF-REERVNAFVCNVVNDDLS------------------------ 114 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~-----------~~-~~~~~~~~~~D~~~~~~~------------------------ 114 (231)
+...+|+|+||++|.++..+.... .. ....++++..|+...++.
T Consensus 50 ~~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgS 129 (359)
T 1m6e_X 50 TTRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGS 129 (359)
T ss_dssp SSEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESC
T ss_pred CCceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchh
Confidence 445789999999999998777330 11 234567777775544432
Q ss_pred ---CCCCCCCeeEEEEeeeeeccC--CC-----------------------------CHHHHHHHHHHhcCCCeEEEEEe
Q 045799 115 ---RNVNPSSVDVVTLIFMLSAVS--PK-----------------------------KMPLILQNIKAVLKPDGYILVCD 160 (231)
Q Consensus 115 ---~~~~~~~fD~ii~~~~l~~~~--~~-----------------------------~~~~~l~~~~~~Lk~gG~l~i~~ 160 (231)
..++++++|+|+++.+||+++ ++ |+..+|+..++.|+|||.+++..
T Consensus 130 Fy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~ 209 (359)
T 1m6e_X 130 FYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTI 209 (359)
T ss_dssp SSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEE
T ss_pred hhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEE
Confidence 246889999999999999984 11 23456999999999999999987
Q ss_pred ccCCchhh--------h-hhhcccc-ccccceEEe----CCCeEEEeeCHHHHHHHHHHcC-ceEEEEEEEee
Q 045799 161 YAIGDFAQ--------V-KLLDRNQ-MIGDSFYVR----GDGTCSFYFSEDFLSTLFLEAG-FSTVDINIHLK 218 (231)
Q Consensus 161 ~~~~~~~~--------~-~~~~~~~-~~~~~~~~~----~~~~~~~~~~~~~l~~~l~~~G-f~~~~~~~~~~ 218 (231)
.+..+... . .+..... ...+..... .-....++.+.+++...++++| |++..++....
T Consensus 210 ~gr~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~ek~d~f~~P~y~ps~~E~~~~ie~~G~F~i~~~e~~~~ 282 (359)
T 1m6e_X 210 LGRRSEDRASTECCLIWQLLAMALNQMVSEGLIEEEKMDKFNIPQYTPSPTEVEAEILKEGSFLIDHIEASEI 282 (359)
T ss_dssp EECSSSSSSSTTTSTTTHHHHHHHHHHHHTTCSCCSTTGGGCCCCBCCCSHHHHHHHHHTTTBCCEEEEEEEE
T ss_pred ecCCCCCccccchHHHHHHHHHHHHHHHHccccchhhhhccCCCccCCCHHHHHHHHHHcCCceEEEEEEEee
Confidence 66654310 0 0000000 000000000 0012235678999999999985 58888876643
No 188
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=98.89 E-value=7.4e-10 Score=90.12 Aligned_cols=89 Identities=11% Similarity=0.122 Sum_probs=61.0
Q ss_pred CCCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccc--------------------------------cCCC
Q 045799 70 NGNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDL--------------------------------SRNV 117 (231)
Q Consensus 70 ~~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~--------------------------------~~~~ 117 (231)
..++.+|||||||+|..+..++.... .-.++++|+++.++ ..++
T Consensus 171 l~~gd~VLDLGCGtG~l~l~lA~~~g----~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~lp~ 246 (438)
T 3uwp_A 171 MTDDDLFVDLGSGVGQVVLQVAAATN----CKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSEEW 246 (438)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHCC----CSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTSHHH
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHCC----CCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccCCcc
Confidence 47889999999999999988873211 01245555553110 0011
Q ss_pred CC--CCeeEEEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCc
Q 045799 118 NP--SSVDVVTLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGD 165 (231)
Q Consensus 118 ~~--~~fD~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~ 165 (231)
.+ ..||+|+++.++ +. ++....|.++++.|||||.+++.+...+.
T Consensus 247 ~d~~~~aDVVf~Nn~~-F~--pdl~~aL~Ei~RvLKPGGrIVssE~f~p~ 293 (438)
T 3uwp_A 247 RERIANTSVIFVNNFA-FG--PEVDHQLKERFANMKEGGRIVSSKPFAPL 293 (438)
T ss_dssp HHHHHTCSEEEECCTT-CC--HHHHHHHHHHHTTSCTTCEEEESSCSSCT
T ss_pred ccccCCccEEEEcccc-cC--chHHHHHHHHHHcCCCCcEEEEeecccCC
Confidence 11 369999987664 33 57888899999999999999998755543
No 189
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=98.89 E-value=2.8e-09 Score=82.10 Aligned_cols=85 Identities=12% Similarity=0.080 Sum_probs=60.4
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC--------------------------CC-CCCCee
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR--------------------------NV-NPSSVD 123 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~--------------------------~~-~~~~fD 123 (231)
.++.+|||||||+|..+..++.... ...+++++|+++.++.. .+ ..++||
T Consensus 62 ~~~~~VLdiG~G~G~~~~~la~~~~---~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD 138 (248)
T 3tfw_A 62 TQAKRILEIGTLGGYSTIWMARELP---ADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFD 138 (248)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTSC---TTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCS
T ss_pred cCCCEEEEecCCchHHHHHHHHhCC---CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeE
Confidence 4678999999999999999984421 12356677766544321 11 134899
Q ss_pred EEEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccC
Q 045799 124 VVTLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAI 163 (231)
Q Consensus 124 ~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~ 163 (231)
+|++... . .+...+++++.++|||||++++.+...
T Consensus 139 ~V~~d~~---~--~~~~~~l~~~~~~LkpGG~lv~~~~~~ 173 (248)
T 3tfw_A 139 LIFIDAD---K--PNNPHYLRWALRYSRPGTLIIGDNVVR 173 (248)
T ss_dssp EEEECSC---G--GGHHHHHHHHHHTCCTTCEEEEECCSG
T ss_pred EEEECCc---h--HHHHHHHHHHHHhcCCCeEEEEeCCCc
Confidence 9998542 2 566789999999999999998876443
No 190
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=98.87 E-value=1.1e-10 Score=90.16 Aligned_cols=132 Identities=13% Similarity=-0.008 Sum_probs=68.8
Q ss_pred CCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccc---------------------------cCCCC---CCC
Q 045799 72 NPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDL---------------------------SRNVN---PSS 121 (231)
Q Consensus 72 ~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~---------------------------~~~~~---~~~ 121 (231)
++.+|||+|||+|.++..++.... ..+++++|+++.++ ..+++ +++
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~----~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 140 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLN----GWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEII 140 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHH----CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCC
T ss_pred CCCEEEEeCCChhHHHHHHHHhCC----CCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCc
Confidence 567999999999999888773210 12333444333221 11233 268
Q ss_pred eeEEEEeeeeeccCC-------------CCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCC
Q 045799 122 VDVVTLIFMLSAVSP-------------KKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDG 188 (231)
Q Consensus 122 fD~ii~~~~l~~~~~-------------~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (231)
||+|++.-.+++... +....++.+++++|||||.+.+.+....... .+.. ...+....
T Consensus 141 fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~~~~~~~~~--~~l~-----~~g~~~~~-- 211 (254)
T 2h00_A 141 YDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSL--QLKK-----RLRWYSCM-- 211 (254)
T ss_dssp BSEEEECCCCC-------------------------CTTTTHHHHTHHHHHHHHHHHHH--HHGG-----GBSCEEEE--
T ss_pred ccEEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEEHHHHHHHH--hccc-----ceEEEEEC--
Confidence 999999754443320 1123567888999999998876532111100 0000 00111000
Q ss_pred eEEEeeCHHHHHHHHHHcCceEEEEEEEe
Q 045799 189 TCSFYFSEDFLSTLFLEAGFSTVDINIHL 217 (231)
Q Consensus 189 ~~~~~~~~~~l~~~l~~~Gf~~~~~~~~~ 217 (231)
.......+++.++|+++||+.+++....
T Consensus 212 -~~~~~~~~~~~~~l~~~Gf~~v~~~~~~ 239 (254)
T 2h00_A 212 -LGKKCSLAPLKEELRIQGVPKVTYTEFC 239 (254)
T ss_dssp -ESSTTSHHHHHHHHHHTTCSEEEEEEEE
T ss_pred -CCChhHHHHHHHHHHHcCCCceEEEEEe
Confidence 0011234789999999999887765543
No 191
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=98.87 E-value=3.5e-09 Score=79.35 Aligned_cols=82 Identities=11% Similarity=0.183 Sum_probs=58.7
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC-------------------------CCCCCCeeEE
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR-------------------------NVNPSSVDVV 125 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~-------------------------~~~~~~fD~i 125 (231)
.++.+|||||||+|..+..++.... .+.+++++|+++.++.. +..++ ||+|
T Consensus 55 ~~~~~vLdiG~G~G~~~~~la~~~~---~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v 130 (210)
T 3c3p_A 55 KQPQLVVVPGDGLGCASWWFARAIS---ISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDIL 130 (210)
T ss_dssp HCCSEEEEESCGGGHHHHHHHTTSC---TTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEE
T ss_pred hCCCEEEEEcCCccHHHHHHHHhCC---CCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEE
Confidence 3567999999999999999884321 12355667766544310 22235 9999
Q ss_pred EEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEec
Q 045799 126 TLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDY 161 (231)
Q Consensus 126 i~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~ 161 (231)
++.. +..+...+++++.++|+|||++++.+.
T Consensus 131 ~~~~-----~~~~~~~~l~~~~~~LkpgG~lv~~~~ 161 (210)
T 3c3p_A 131 FMDC-----DVFNGADVLERMNRCLAKNALLIAVNA 161 (210)
T ss_dssp EEET-----TTSCHHHHHHHHGGGEEEEEEEEEESS
T ss_pred EEcC-----ChhhhHHHHHHHHHhcCCCeEEEEECc
Confidence 9863 226788999999999999999988653
No 192
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.85 E-value=4.2e-09 Score=79.67 Aligned_cols=85 Identities=14% Similarity=0.151 Sum_probs=60.4
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC--------------------------CCC----CC
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR--------------------------NVN----PS 120 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~--------------------------~~~----~~ 120 (231)
.++.+|||||||+|..+..++.... ...+++++|+++.++.. .+. .+
T Consensus 63 ~~~~~vLdiG~G~G~~~~~la~~~~---~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~ 139 (225)
T 3tr6_A 63 MQAKKVIDIGTFTGYSAIAMGLALP---KDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAW 139 (225)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCC---TTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTT
T ss_pred hCCCEEEEeCCcchHHHHHHHHhCC---CCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCC
Confidence 4568999999999999999984321 12356677776544311 011 17
Q ss_pred CeeEEEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccC
Q 045799 121 SVDVVTLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAI 163 (231)
Q Consensus 121 ~fD~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~ 163 (231)
+||+|++... ..+...+++.+.++|+|||++++.+...
T Consensus 140 ~fD~v~~~~~-----~~~~~~~l~~~~~~L~pgG~lv~~~~~~ 177 (225)
T 3tr6_A 140 QYDLIYIDAD-----KANTDLYYEESLKLLREGGLIAVDNVLR 177 (225)
T ss_dssp CEEEEEECSC-----GGGHHHHHHHHHHHEEEEEEEEEECSSG
T ss_pred CccEEEECCC-----HHHHHHHHHHHHHhcCCCcEEEEeCCCc
Confidence 8999996442 2567889999999999999999876543
No 193
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=98.85 E-value=1.4e-09 Score=83.01 Aligned_cols=80 Identities=16% Similarity=0.234 Sum_probs=55.2
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccc----------------------cCCCCC-CCeeEEEE
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDL----------------------SRNVNP-SSVDVVTL 127 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~----------------------~~~~~~-~~fD~ii~ 127 (231)
.++.+|||||||+|.++..++.... .+++++|+++.++ ..++++ .+||+|++
T Consensus 90 ~~~~~vLdiG~G~G~~~~~la~~~~-----~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Ii~ 164 (235)
T 1jg1_A 90 KPGMNILEVGTGSGWNAALISEIVK-----TDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGFPPKAPYDVIIV 164 (235)
T ss_dssp CTTCCEEEECCTTSHHHHHHHHHHC-----SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEE
T ss_pred CCCCEEEEEeCCcCHHHHHHHHHhC-----CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCcccCCCCCCCccEEEE
Confidence 6678999999999999988873211 1334444433221 112333 35999999
Q ss_pred eeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccC
Q 045799 128 IFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAI 163 (231)
Q Consensus 128 ~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~ 163 (231)
..++++++ .++.+.|+|||.+++.....
T Consensus 165 ~~~~~~~~--------~~~~~~L~pgG~lvi~~~~~ 192 (235)
T 1jg1_A 165 TAGAPKIP--------EPLIEQLKIGGKLIIPVGSY 192 (235)
T ss_dssp CSBBSSCC--------HHHHHTEEEEEEEEEEECSS
T ss_pred CCcHHHHH--------HHHHHhcCCCcEEEEEEecC
Confidence 99998883 26789999999999875443
No 194
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=98.85 E-value=1.9e-09 Score=86.77 Aligned_cols=133 Identities=16% Similarity=0.143 Sum_probs=54.7
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCcc--c-------------------c--------------ccceeeeeecCCcccccC
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSE--F-------------------R--------------EERVNAFVCNVVNDDLSR 115 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~--~-------------------~--------------~~~~~~~~~D~~~~~~~~ 115 (231)
.++.+|||+|||+|.++..++.... . . ..++.+...|+.... .
T Consensus 104 ~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~--~ 181 (336)
T 2b25_A 104 NPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGAT--E 181 (336)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC---
T ss_pred CCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHcc--c
Confidence 6788999999999999988873210 0 0 012333333433211 1
Q ss_pred CCCCCCeeEEEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhh--hhcc---------ccccccceEE
Q 045799 116 NVNPSSVDVVTLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVK--LLDR---------NQMIGDSFYV 184 (231)
Q Consensus 116 ~~~~~~fD~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~--~~~~---------~~~~~~~~~~ 184 (231)
++++++||+|++.. ..+..++.++.++|+|||.+++............ +... .......|..
T Consensus 182 ~~~~~~fD~V~~~~-------~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~w~~ 254 (336)
T 2b25_A 182 DIKSLTFDAVALDM-------LNPHVTLPVFYPHLKHGGVCAVYVVNITQVIELLDGIRTCELALSCEKISEVIVRDWLV 254 (336)
T ss_dssp ------EEEEEECS-------SSTTTTHHHHGGGEEEEEEEEEEESSHHHHHHHHHHHHHHTCCEEEEEEECCCCCCEEE
T ss_pred ccCCCCeeEEEECC-------CCHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhcCCCcccceEEEecccceEE
Confidence 23456899999842 2334488999999999999998765443221110 0000 0011111111
Q ss_pred eCCCeEEEeeCHHHHHHHHHHcCceEEEEEEEe
Q 045799 185 RGDGTCSFYFSEDFLSTLFLEAGFSTVDINIHL 217 (231)
Q Consensus 185 ~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~~~~ 217 (231)
.. . . ....+....|+++||+.+++....
T Consensus 255 ~~-~---~-~~~g~y~~~l~~aGF~~v~~~~~~ 282 (336)
T 2b25_A 255 CL-A---K-QKNGILAQKVESKINTDVQLDSQE 282 (336)
T ss_dssp CC-------------------------------
T ss_pred Ee-e---c-ccccchhhhhcccccccccccccc
Confidence 00 0 0 011278889999999999876654
No 195
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.85 E-value=1.7e-09 Score=85.62 Aligned_cols=85 Identities=15% Similarity=0.148 Sum_probs=57.2
Q ss_pred CeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC-------------------------CCCCCCeeEEEEe
Q 045799 74 KVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR-------------------------NVNPSSVDVVTLI 128 (231)
Q Consensus 74 ~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~-------------------------~~~~~~fD~ii~~ 128 (231)
.+|||||||+|..+..++... . .++++.+|+++.++.. .+++++||+|++.
T Consensus 91 ~rVLdIG~G~G~la~~la~~~--p--~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D 166 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVY--P--QSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRD 166 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHS--T--TCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEEC
T ss_pred CEEEEEECCcCHHHHHHHHHC--C--CcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEEC
Confidence 499999999999999988421 1 2244555555443211 2346789999986
Q ss_pred eeeeccCCCC--HHHHHHHHHHhcCCCeEEEEEecc
Q 045799 129 FMLSAVSPKK--MPLILQNIKAVLKPDGYILVCDYA 162 (231)
Q Consensus 129 ~~l~~~~~~~--~~~~l~~~~~~Lk~gG~l~i~~~~ 162 (231)
...+...+.. ...+++.++++|+|||++++....
T Consensus 167 ~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~~ 202 (317)
T 3gjy_A 167 VFAGAITPQNFTTVEFFEHCHRGLAPGGLYVANCGD 202 (317)
T ss_dssp CSTTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred CCCccccchhhhHHHHHHHHHHhcCCCcEEEEEecC
Confidence 4333221112 268999999999999999887543
No 196
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=98.84 E-value=5e-09 Score=79.22 Aligned_cols=85 Identities=11% Similarity=0.087 Sum_probs=60.4
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC--------------------------CC---CCCC
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR--------------------------NV---NPSS 121 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~--------------------------~~---~~~~ 121 (231)
.++.+|||||||+|..+..++.... .+.+++++|+++.++.. .+ ..++
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~---~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~ 133 (223)
T 3duw_A 57 QGARNILEIGTLGGYSTIWLARGLS---SGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEP 133 (223)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCC---SSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCC
T ss_pred hCCCEEEEecCCccHHHHHHHHhCC---CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCC
Confidence 4678999999999999999984421 12356777776544321 00 0157
Q ss_pred eeEEEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccC
Q 045799 122 VDVVTLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAI 163 (231)
Q Consensus 122 fD~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~ 163 (231)
||+|++.... .....+++.+.++|+|||++++.+...
T Consensus 134 fD~v~~d~~~-----~~~~~~l~~~~~~L~pgG~lv~~~~~~ 170 (223)
T 3duw_A 134 FDFIFIDADK-----QNNPAYFEWALKLSRPGTVIIGDNVVR 170 (223)
T ss_dssp CSEEEECSCG-----GGHHHHHHHHHHTCCTTCEEEEESCSG
T ss_pred cCEEEEcCCc-----HHHHHHHHHHHHhcCCCcEEEEeCCCc
Confidence 9999986542 456789999999999999998875443
No 197
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=98.83 E-value=3.9e-09 Score=81.31 Aligned_cols=43 Identities=21% Similarity=0.209 Sum_probs=33.1
Q ss_pred CCCeeEEEEeeeeeccCC-------CCHHHHHHHHHHhcCCCeEEEEEec
Q 045799 119 PSSVDVVTLIFMLSAVSP-------KKMPLILQNIKAVLKPDGYILVCDY 161 (231)
Q Consensus 119 ~~~fD~ii~~~~l~~~~~-------~~~~~~l~~~~~~Lk~gG~l~i~~~ 161 (231)
.++||+|++...+.+... +....+++++.++|+|||++++...
T Consensus 166 ~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 215 (250)
T 1o9g_A 166 GSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAVIAVTDR 215 (250)
T ss_dssp TCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCEEEEEES
T ss_pred CCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcEEEEeCc
Confidence 348999999876665521 2345899999999999999998543
No 198
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.83 E-value=2.7e-08 Score=73.84 Aligned_cols=74 Identities=9% Similarity=0.065 Sum_probs=49.5
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC----------------CCCCCCeeEEEEeeeeecc
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR----------------NVNPSSVDVVTLIFMLSAV 134 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~----------------~~~~~~fD~ii~~~~l~~~ 134 (231)
.++.+|||+|||+|.++..++... ..+++++|+++.++.. .++ ++||+|++...+++.
T Consensus 50 ~~~~~vlD~gcG~G~~~~~l~~~~-----~~~v~~vD~~~~~~~~a~~~~~~~~~~~~d~~~~~-~~~D~v~~~~p~~~~ 123 (200)
T 1ne2_A 50 IGGRSVIDAGTGNGILACGSYLLG-----AESVTAFDIDPDAIETAKRNCGGVNFMVADVSEIS-GKYDTWIMNPPFGSV 123 (200)
T ss_dssp SBTSEEEEETCTTCHHHHHHHHTT-----BSEEEEEESCHHHHHHHHHHCTTSEEEECCGGGCC-CCEEEEEECCCC---
T ss_pred CCCCEEEEEeCCccHHHHHHHHcC-----CCEEEEEECCHHHHHHHHHhcCCCEEEECcHHHCC-CCeeEEEECCCchhc
Confidence 467899999999999998887441 1245677766544321 122 689999999999988
Q ss_pred CCCCHHHHHHHHHHhc
Q 045799 135 SPKKMPLILQNIKAVL 150 (231)
Q Consensus 135 ~~~~~~~~l~~~~~~L 150 (231)
+......+++++.+.+
T Consensus 124 ~~~~~~~~l~~~~~~~ 139 (200)
T 1ne2_A 124 VKHSDRAFIDKAFETS 139 (200)
T ss_dssp ----CHHHHHHHHHHE
T ss_pred cCchhHHHHHHHHHhc
Confidence 5444567899999998
No 199
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=98.83 E-value=1.5e-09 Score=82.66 Aligned_cols=83 Identities=13% Similarity=0.169 Sum_probs=58.5
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC-------------------------CCC--CCCee
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR-------------------------NVN--PSSVD 123 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~-------------------------~~~--~~~fD 123 (231)
.++.+|||+|||+|..+..++.... ..+++++|+++.++.. +.. +++||
T Consensus 53 ~~~~~vLdiG~G~G~~~~~la~~~~----~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD 128 (233)
T 2gpy_A 53 AAPARILEIGTAIGYSAIRMAQALP----EATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFD 128 (233)
T ss_dssp HCCSEEEEECCTTSHHHHHHHHHCT----TCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEE
T ss_pred cCCCEEEEecCCCcHHHHHHHHHCC----CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCcc
Confidence 4578999999999999988874321 2244555554332210 111 46899
Q ss_pred EEEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEecc
Q 045799 124 VVTLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYA 162 (231)
Q Consensus 124 ~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~ 162 (231)
+|++.... .+...+++.+.++|+|||.+++.+..
T Consensus 129 ~I~~~~~~-----~~~~~~l~~~~~~L~pgG~lv~~~~~ 162 (233)
T 2gpy_A 129 VLFIDAAK-----GQYRRFFDMYSPMVRPGGLILSDNVL 162 (233)
T ss_dssp EEEEEGGG-----SCHHHHHHHHGGGEEEEEEEEEETTT
T ss_pred EEEECCCH-----HHHHHHHHHHHHHcCCCeEEEEEcCC
Confidence 99986643 46788999999999999999997543
No 200
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=98.81 E-value=7.5e-09 Score=79.41 Aligned_cols=78 Identities=15% Similarity=0.112 Sum_probs=56.2
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc-----------------------CCC-CCCCeeEEE
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS-----------------------RNV-NPSSVDVVT 126 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~-----------------------~~~-~~~~fD~ii 126 (231)
.++.+|||+|||+|.++..++.. ..+++++|+++.++. ..+ ++++||+|+
T Consensus 90 ~~~~~vldiG~G~G~~~~~l~~~------~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~ 163 (248)
T 2yvl_A 90 NKEKRVLEFGTGSGALLAVLSEV------AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEGIFHAAF 163 (248)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHH------SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCTTCBSEEE
T ss_pred CCCCEEEEeCCCccHHHHHHHHh------CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCCCcccEEE
Confidence 57789999999999999888743 123445554432211 122 456899999
Q ss_pred EeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEec
Q 045799 127 LIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDY 161 (231)
Q Consensus 127 ~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~ 161 (231)
+ +. .++..+++.+.++|+|||.+++...
T Consensus 164 ~-----~~--~~~~~~l~~~~~~L~~gG~l~~~~~ 191 (248)
T 2yvl_A 164 V-----DV--REPWHYLEKVHKSLMEGAPVGFLLP 191 (248)
T ss_dssp E-----CS--SCGGGGHHHHHHHBCTTCEEEEEES
T ss_pred E-----CC--cCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 7 33 4677899999999999999998754
No 201
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=98.80 E-value=4e-09 Score=79.77 Aligned_cols=81 Identities=10% Similarity=0.128 Sum_probs=56.8
Q ss_pred CCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc---------------------------CCCCCCCeeEE
Q 045799 73 PKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS---------------------------RNVNPSSVDVV 125 (231)
Q Consensus 73 ~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~---------------------------~~~~~~~fD~i 125 (231)
+.+|||||||+|..+..++... ..+.+++++|+++.++. ..+++++||+|
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~---~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V 133 (221)
T 3dr5_A 57 STGAIAITPAAGLVGLYILNGL---ADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLV 133 (221)
T ss_dssp CCEEEEESTTHHHHHHHHHHHS---CTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEE
T ss_pred CCCEEEEcCCchHHHHHHHHhC---CCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeE
Confidence 4599999999999999887321 01224556665544321 02236799999
Q ss_pred EEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEec
Q 045799 126 TLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDY 161 (231)
Q Consensus 126 i~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~ 161 (231)
++... ..+...+++.+.++|+|||++++.+.
T Consensus 134 ~~d~~-----~~~~~~~l~~~~~~LkpGG~lv~dn~ 164 (221)
T 3dr5_A 134 FGQVS-----PMDLKALVDAAWPLLRRGGALVLADA 164 (221)
T ss_dssp EECCC-----TTTHHHHHHHHHHHEEEEEEEEETTT
T ss_pred EEcCc-----HHHHHHHHHHHHHHcCCCcEEEEeCC
Confidence 88542 25677899999999999999998643
No 202
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.80 E-value=2.7e-09 Score=80.63 Aligned_cols=81 Identities=11% Similarity=0.183 Sum_probs=61.8
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC---------------------CCCCCCeeEEEEee
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR---------------------NVNPSSVDVVTLIF 129 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~---------------------~~~~~~fD~ii~~~ 129 (231)
.++.+|||||||+|.++..++ ....+.++|+++.++.. ..+.++||+|++.-
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~-------~~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~~~~~~DvvLllk 176 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER-------GIASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAPPAEAGDLALIFK 176 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT-------TCSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSCCCCBCSEEEEES
T ss_pred CCCCeEEEecCCccHHHHHhc-------cCCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccCCCCCCcchHHHHH
Confidence 457899999999999998877 13466777877766532 22446999999999
Q ss_pred eeeccCCCCHHHHHHHHHHhcCCCeEEEEE
Q 045799 130 MLSAVSPKKMPLILQNIKAVLKPDGYILVC 159 (231)
Q Consensus 130 ~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~ 159 (231)
++||+...+....+ ++...|+++|+++..
T Consensus 177 ~lh~LE~q~~~~~~-~ll~aL~~~~vvVsf 205 (253)
T 3frh_A 177 LLPLLEREQAGSAM-ALLQSLNTPRMAVSF 205 (253)
T ss_dssp CHHHHHHHSTTHHH-HHHHHCBCSEEEEEE
T ss_pred HHHHhhhhchhhHH-HHHHHhcCCCEEEEc
Confidence 99999644555555 888899999888664
No 203
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=98.80 E-value=8.8e-09 Score=79.15 Aligned_cols=84 Identities=17% Similarity=0.268 Sum_probs=54.0
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccc-------------------------------cccceeeeeecCCcccccCCCCC
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEF-------------------------------REERVNAFVCNVVNDDLSRNVNP 119 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~-------------------------------~~~~~~~~~~D~~~~~~~~~~~~ 119 (231)
.++.+|||||||+|.++..++..... .-.++.++..|+... +...+..
T Consensus 48 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~-l~~~~~~ 126 (246)
T 2vdv_E 48 TKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKF-LPNFFEK 126 (246)
T ss_dssp SCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSC-GGGTSCT
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHH-HHHhccc
Confidence 46789999999999999988732100 001334444444321 1112456
Q ss_pred CCeeEEEEeeeeeccCCCCH-----------HHHHHHHHHhcCCCeEEEEEe
Q 045799 120 SSVDVVTLIFMLSAVSPKKM-----------PLILQNIKAVLKPDGYILVCD 160 (231)
Q Consensus 120 ~~fD~ii~~~~l~~~~~~~~-----------~~~l~~~~~~Lk~gG~l~i~~ 160 (231)
+++|.|+..+ ++..+ ..++.++.++|+|||.+++..
T Consensus 127 ~~~d~v~~~~-----p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~t 173 (246)
T 2vdv_E 127 GQLSKMFFCF-----PDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTIT 173 (246)
T ss_dssp TCEEEEEEES-----CCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccCEEEEEC-----CCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEe
Confidence 7888888533 22221 489999999999999999863
No 204
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=98.80 E-value=1.5e-09 Score=89.65 Aligned_cols=86 Identities=15% Similarity=0.218 Sum_probs=58.5
Q ss_pred CCCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc----------------------------CCC----
Q 045799 70 NGNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS----------------------------RNV---- 117 (231)
Q Consensus 70 ~~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~----------------------------~~~---- 117 (231)
..++.+|||||||+|.++..++.... ...++++|++..++. ..+
T Consensus 240 l~~g~~VLDLGCGsG~la~~LA~~~g----~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~~~~ 315 (433)
T 1u2z_A 240 LKKGDTFMDLGSGVGNCVVQAALECG----CALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDNN 315 (433)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHC----CSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTCH
T ss_pred CCCCCEEEEeCCCcCHHHHHHHHHCC----CCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCcccccc
Confidence 36788999999999999998874211 012344444322100 011
Q ss_pred ----CCCCeeEEEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEecc
Q 045799 118 ----NPSSVDVVTLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYA 162 (231)
Q Consensus 118 ----~~~~fD~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~ 162 (231)
..++||+|++..++ +. ++...+++++.+.|||||.+++.+..
T Consensus 316 ~~~~~~~~FDvIvvn~~l-~~--~d~~~~L~el~r~LKpGG~lVi~d~f 361 (433)
T 1u2z_A 316 RVAELIPQCDVILVNNFL-FD--EDLNKKVEKILQTAKVGCKIISLKSL 361 (433)
T ss_dssp HHHHHGGGCSEEEECCTT-CC--HHHHHHHHHHHTTCCTTCEEEESSCS
T ss_pred ccccccCCCCEEEEeCcc-cc--ccHHHHHHHHHHhCCCCeEEEEeecc
Confidence 13589999987665 33 56788899999999999999998533
No 205
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.79 E-value=6.5e-09 Score=82.37 Aligned_cols=86 Identities=23% Similarity=0.288 Sum_probs=54.8
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc----------------------------CCCCCCCe
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS----------------------------RNVNPSSV 122 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~----------------------------~~~~~~~f 122 (231)
.++.+|||||||+|..+..++.... ..+++++|+++.++. .+..+++|
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~----~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~f 169 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPS----VESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAF 169 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTT----CCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCE
T ss_pred CCCCEEEEECCCchHHHHHHHHcCC----CCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCc
Confidence 4568999999999999999984421 123445554432210 01135789
Q ss_pred eEEEEeeeeeccCCC--CHHHHHHHHHHhcCCCeEEEEEe
Q 045799 123 DVVTLIFMLSAVSPK--KMPLILQNIKAVLKPDGYILVCD 160 (231)
Q Consensus 123 D~ii~~~~l~~~~~~--~~~~~l~~~~~~Lk~gG~l~i~~ 160 (231)
|+|++....+..+.. ....++++++++|+|||++++..
T Consensus 170 D~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 209 (304)
T 2o07_A 170 DVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG 209 (304)
T ss_dssp EEEEEECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred eEEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEec
Confidence 999996543322111 23678999999999999998865
No 206
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.79 E-value=4.9e-09 Score=82.32 Aligned_cols=86 Identities=23% Similarity=0.290 Sum_probs=57.3
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC----------------------------CCCCCCe
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR----------------------------NVNPSSV 122 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~----------------------------~~~~~~f 122 (231)
+++.+|||||||+|..+..++.... ..+++++|+++.++.. +..+++|
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~----~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~f 152 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKS----VENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTY 152 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTT----CCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCE
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCC----CCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCc
Confidence 4568999999999999999974321 2244455544322110 1125789
Q ss_pred eEEEEeeeeeccCCCCH--HHHHHHHHHhcCCCeEEEEEe
Q 045799 123 DVVTLIFMLSAVSPKKM--PLILQNIKAVLKPDGYILVCD 160 (231)
Q Consensus 123 D~ii~~~~l~~~~~~~~--~~~l~~~~~~Lk~gG~l~i~~ 160 (231)
|+|++....++.+.... ..+++.++++|+|||++++..
T Consensus 153 D~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 192 (283)
T 2i7c_A 153 DVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 192 (283)
T ss_dssp EEEEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEEC
T ss_pred eEEEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEC
Confidence 99999654333222222 689999999999999998864
No 207
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.79 E-value=6.1e-09 Score=83.53 Aligned_cols=85 Identities=22% Similarity=0.305 Sum_probs=56.2
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc-----------------------------CCCCCCC
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS-----------------------------RNVNPSS 121 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~-----------------------------~~~~~~~ 121 (231)
.++.+|||||||+|..+..++.... ..+++++|+++.++. ...++++
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~~----~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~ 194 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHAS----IEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGS 194 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTT----CCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTC
T ss_pred CCCCEEEEECCCccHHHHHHHHcCC----CCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCC
Confidence 4568999999999999999984321 224445554432210 0123578
Q ss_pred eeEEEEeeeeeccCCCC--HHHHHHHHHHhcCCCeEEEEE
Q 045799 122 VDVVTLIFMLSAVSPKK--MPLILQNIKAVLKPDGYILVC 159 (231)
Q Consensus 122 fD~ii~~~~l~~~~~~~--~~~~l~~~~~~Lk~gG~l~i~ 159 (231)
||+|++......-+.+. ...+++.++++|+|||++++.
T Consensus 195 fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 234 (334)
T 1xj5_A 195 YDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQ 234 (334)
T ss_dssp EEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred ccEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 99999855321111121 468999999999999999885
No 208
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.78 E-value=7.2e-08 Score=78.96 Aligned_cols=86 Identities=12% Similarity=0.075 Sum_probs=58.8
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC-----------------------CCCCCCeeEEEE
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR-----------------------NVNPSSVDVVTL 127 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~-----------------------~~~~~~fD~ii~ 127 (231)
.++.+|||+|||+|.++..++.. +..++++|+++.++.. +...+.||+|++
T Consensus 213 ~~g~~VLDlg~GtG~~sl~~a~~------ga~V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~~~~~fD~Ii~ 286 (393)
T 4dmg_A 213 RPGERVLDVYSYVGGFALRAARK------GAYALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPTLRGLEGPFHHVLL 286 (393)
T ss_dssp CTTCEEEEESCTTTHHHHHHHHT------TCEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHHTCCCCEEEEEE
T ss_pred cCCCeEEEcccchhHHHHHHHHc------CCeEEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHHHhcCCCCEEEE
Confidence 45889999999999999998853 2236788887766531 011334999998
Q ss_pred eeeeeccC-------CCCHHHHHHHHHHhcCCCeEEEEEecc
Q 045799 128 IFMLSAVS-------PKKMPLILQNIKAVLKPDGYILVCDYA 162 (231)
Q Consensus 128 ~~~l~~~~-------~~~~~~~l~~~~~~Lk~gG~l~i~~~~ 162 (231)
.-....-. ..+...++..+.++|+|||.+++.+.+
T Consensus 287 dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s 328 (393)
T 4dmg_A 287 DPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCS 328 (393)
T ss_dssp CCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 53210000 023467899999999999999876533
No 209
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.77 E-value=8.7e-09 Score=80.53 Aligned_cols=87 Identities=23% Similarity=0.284 Sum_probs=55.5
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCcc---------------------------ccccceeeeeecCCcccccCCCCCCCee
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSE---------------------------FREERVNAFVCNVVNDDLSRNVNPSSVD 123 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~---------------------------~~~~~~~~~~~D~~~~~~~~~~~~~~fD 123 (231)
+++.+|||||||+|..+..++.... +...+++++..|.... + +..+++||
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~-l--~~~~~~fD 150 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMH-I--AKSENQYD 150 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHH-H--HTCCSCEE
T ss_pred CCCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHH-H--hhCCCCee
Confidence 4568999999999999999884311 0112233333333211 0 11357899
Q ss_pred EEEEeeeeeccCCCC--HHHHHHHHHHhcCCCeEEEEEe
Q 045799 124 VVTLIFMLSAVSPKK--MPLILQNIKAVLKPDGYILVCD 160 (231)
Q Consensus 124 ~ii~~~~l~~~~~~~--~~~~l~~~~~~Lk~gG~l~i~~ 160 (231)
+|++....+..+... ...+++.+++.|+|||++++..
T Consensus 151 ~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~ 189 (275)
T 1iy9_A 151 VIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQT 189 (275)
T ss_dssp EEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred EEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 999955433222111 3689999999999999998864
No 210
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=98.77 E-value=9.3e-09 Score=78.34 Aligned_cols=85 Identities=13% Similarity=0.178 Sum_probs=59.7
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC----------------------------CCCC--C
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR----------------------------NVNP--S 120 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~----------------------------~~~~--~ 120 (231)
.++.+|||||||+|..+..++.... .+.+++++|+++.++.. +..+ +
T Consensus 71 ~~~~~vLdiG~G~G~~~~~la~~~~---~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~ 147 (232)
T 3cbg_A 71 TGAKQVLEIGVFRGYSALAMALQLP---PDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLP 147 (232)
T ss_dssp HTCCEEEEECCTTSHHHHHHHTTSC---TTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCC
T ss_pred cCCCEEEEecCCCCHHHHHHHHhCC---CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCC
Confidence 3567999999999999999984321 12355666665443210 1112 7
Q ss_pred CeeEEEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccC
Q 045799 121 SVDVVTLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAI 163 (231)
Q Consensus 121 ~fD~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~ 163 (231)
+||+|++... ..+...+++++.++|+|||++++.+...
T Consensus 148 ~fD~V~~d~~-----~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 185 (232)
T 3cbg_A 148 EFDLIFIDAD-----KRNYPRYYEIGLNLLRRGGLMVIDNVLW 185 (232)
T ss_dssp CEEEEEECSC-----GGGHHHHHHHHHHTEEEEEEEEEECTTG
T ss_pred CcCEEEECCC-----HHHHHHHHHHHHHHcCCCeEEEEeCCCc
Confidence 8999997653 2567889999999999999999876443
No 211
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=98.76 E-value=1.5e-08 Score=79.22 Aligned_cols=90 Identities=11% Similarity=0.122 Sum_probs=59.4
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC-----------------------CC----CCCCee
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR-----------------------NV----NPSSVD 123 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~-----------------------~~----~~~~fD 123 (231)
.++.+|||+|||+|..+..++.... ....++++|++..++.. +. ..++||
T Consensus 82 ~~g~~VLDlgaG~G~~t~~la~~~~---~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~fD 158 (274)
T 3ajd_A 82 REDDFILDMCAAPGGKTTHLAQLMK---NKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEIFFD 158 (274)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHHTT---TCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTTCCEE
T ss_pred CCcCEEEEeCCCccHHHHHHHHHcC---CCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhccccCC
Confidence 5778999999999999988874211 01245666666544321 11 256899
Q ss_pred EEEEee------eeeccC----------CCCHHHHHHHHHHhcCCCeEEEEEeccC
Q 045799 124 VVTLIF------MLSAVS----------PKKMPLILQNIKAVLKPDGYILVCDYAI 163 (231)
Q Consensus 124 ~ii~~~------~l~~~~----------~~~~~~~l~~~~~~Lk~gG~l~i~~~~~ 163 (231)
+|++.. ++++-| .+....+++.+.+.|||||.+++++.+.
T Consensus 159 ~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~ 214 (274)
T 3ajd_A 159 KILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSM 214 (274)
T ss_dssp EEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred EEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCC
Confidence 999863 222100 0456789999999999999999876444
No 212
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=98.76 E-value=3.6e-08 Score=76.89 Aligned_cols=83 Identities=19% Similarity=0.206 Sum_probs=58.4
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC---------------------CC-CCCCeeEEEEe
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR---------------------NV-NPSSVDVVTLI 128 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~---------------------~~-~~~~fD~ii~~ 128 (231)
.++.+|||+|||+|.++..++.... ..+++++|+++.++.. .+ ..++||+|++.
T Consensus 118 ~~~~~VLDlgcG~G~~s~~la~~~~----~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~~~~~~~D~Vi~d 193 (272)
T 3a27_A 118 NENEVVVDMFAGIGYFTIPLAKYSK----PKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVELKDVADRVIMG 193 (272)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTC----CSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCCCTTCEEEEEEC
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCC----CCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHcCccCCceEEEEC
Confidence 6778999999999999999884311 1244555555433210 01 14689999885
Q ss_pred eeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccC
Q 045799 129 FMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAI 163 (231)
Q Consensus 129 ~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~ 163 (231)
.. .....++..+.+.|+|||.+++.+...
T Consensus 194 ~p------~~~~~~l~~~~~~LkpgG~l~~s~~~~ 222 (272)
T 3a27_A 194 YV------HKTHKFLDKTFEFLKDRGVIHYHETVA 222 (272)
T ss_dssp CC------SSGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred Cc------ccHHHHHHHHHHHcCCCCEEEEEEcCc
Confidence 43 266778999999999999999886554
No 213
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.76 E-value=1.6e-08 Score=84.45 Aligned_cols=92 Identities=15% Similarity=0.209 Sum_probs=59.5
Q ss_pred CCCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc-------------------------CCCCCCCeeE
Q 045799 70 NGNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS-------------------------RNVNPSSVDV 124 (231)
Q Consensus 70 ~~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~-------------------------~~~~~~~fD~ 124 (231)
..++.+|||+|||+|..+..++.... ....++++|++..++. ..+++++||+
T Consensus 257 ~~~g~~VLDlgaG~G~~t~~la~~~~---~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~fD~ 333 (450)
T 2yxl_A 257 PKPGETVVDLAAAPGGKTTHLAELMK---NKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEIIGEEVADK 333 (450)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTT---TCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSSSCSSCEEE
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcC---CCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchhhccCCCCE
Confidence 46778999999999999999874211 0123444554433221 0134478999
Q ss_pred EEE------eeeeeccC-------CCCH-------HHHHHHHHHhcCCCeEEEEEeccCC
Q 045799 125 VTL------IFMLSAVS-------PKKM-------PLILQNIKAVLKPDGYILVCDYAIG 164 (231)
Q Consensus 125 ii~------~~~l~~~~-------~~~~-------~~~l~~~~~~Lk~gG~l~i~~~~~~ 164 (231)
|++ ..++++.| +++. ..++..+.+.|||||.+++++.+..
T Consensus 334 Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~ 393 (450)
T 2yxl_A 334 VLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIF 393 (450)
T ss_dssp EEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCC
T ss_pred EEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCC
Confidence 997 22343331 1222 5789999999999999998875553
No 214
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=98.75 E-value=1e-07 Score=71.09 Aligned_cols=109 Identities=17% Similarity=0.137 Sum_probs=71.2
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC--------------------CCCCCCeeEEEEeee
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR--------------------NVNPSSVDVVTLIFM 130 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~--------------------~~~~~~fD~ii~~~~ 130 (231)
.++.+|||+|||+|.++..++... ...++++|+++.++.. .+ +++||+|++...
T Consensus 48 ~~~~~vlD~g~G~G~~~~~l~~~~-----~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~-~~~~D~v~~~~p 121 (207)
T 1wy7_A 48 IEGKVVADLGAGTGVLSYGALLLG-----AKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEF-NSRVDIVIMNPP 121 (207)
T ss_dssp STTCEEEEETCTTCHHHHHHHHTT-----CSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGC-CCCCSEEEECCC
T ss_pred CCcCEEEEeeCCCCHHHHHHHHcC-----CCEEEEEECCHHHHHHHHHHHHHcCCCEEEEECchHHc-CCCCCEEEEcCC
Confidence 467899999999999999887431 1145566665443210 12 248999999888
Q ss_pred eeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeEEEeeCHHHHHHHHHHcCceE
Q 045799 131 LSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYFSEDFLSTLFLEAGFST 210 (231)
Q Consensus 131 l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~ 210 (231)
+++........+++.+.+.+ |+.+++. .... -+.+.+.+.+.+.||++
T Consensus 122 ~~~~~~~~~~~~l~~~~~~l--~~~~~~~-~~~~-----------------------------~~~~~~~~~l~~~g~~~ 169 (207)
T 1wy7_A 122 FGSQRKHADRPFLLKAFEIS--DVVYSIH-LAKP-----------------------------EVRRFIEKFSWEHGFVV 169 (207)
T ss_dssp CSSSSTTTTHHHHHHHHHHC--SEEEEEE-ECCH-----------------------------HHHHHHHHHHHHTTEEE
T ss_pred CccccCCchHHHHHHHHHhc--CcEEEEE-eCCc-----------------------------CCHHHHHHHHHHCCCeE
Confidence 77765455677899999988 5544332 1110 12345677788889887
Q ss_pred EEEEEEe
Q 045799 211 VDINIHL 217 (231)
Q Consensus 211 ~~~~~~~ 217 (231)
..+....
T Consensus 170 ~~~~~~~ 176 (207)
T 1wy7_A 170 THRLTTK 176 (207)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 7665543
No 215
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.75 E-value=6.8e-09 Score=82.70 Aligned_cols=86 Identities=22% Similarity=0.268 Sum_probs=57.2
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc-----------------------------CCCCCCC
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS-----------------------------RNVNPSS 121 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~-----------------------------~~~~~~~ 121 (231)
+++.+|||||||+|..+..++.... ..+++++|+++.++. .+..+++
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~----~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~ 151 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPT----VEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEER 151 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTT----CCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCC
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCC----CCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCC
Confidence 4568999999999999999984321 123444444432210 0113578
Q ss_pred eeEEEEeeeeec---cCCCC--HHHHHHHHHHhcCCCeEEEEEe
Q 045799 122 VDVVTLIFMLSA---VSPKK--MPLILQNIKAVLKPDGYILVCD 160 (231)
Q Consensus 122 fD~ii~~~~l~~---~~~~~--~~~~l~~~~~~Lk~gG~l~i~~ 160 (231)
||+|++....+. -+... ...+++.++++|+|||++++..
T Consensus 152 fD~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 195 (314)
T 1uir_A 152 YDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQT 195 (314)
T ss_dssp EEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred ccEEEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEc
Confidence 999999765543 11111 3789999999999999999864
No 216
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.75 E-value=7.2e-09 Score=82.40 Aligned_cols=85 Identities=19% Similarity=0.297 Sum_probs=52.9
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC----------------------------CCCCCCe
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR----------------------------NVNPSSV 122 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~----------------------------~~~~~~f 122 (231)
.++.+|||||||+|..+..++.... ..+++++|+++.++.. +..+++|
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~~----~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~f 182 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHES----VEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEF 182 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCTT----CCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcCC----CCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCc
Confidence 4568999999999999999984321 2244455544322110 1135789
Q ss_pred eEEEEeeeeeccC-CCCH--HHHHHHHHHhcCCCeEEEEEe
Q 045799 123 DVVTLIFMLSAVS-PKKM--PLILQNIKAVLKPDGYILVCD 160 (231)
Q Consensus 123 D~ii~~~~l~~~~-~~~~--~~~l~~~~~~Lk~gG~l~i~~ 160 (231)
|+|++... +++. .... ..+++.++++|+|||++++..
T Consensus 183 D~Ii~d~~-~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 183 DVIITDSS-DPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp EEEEECCC--------------HHHHHHHHEEEEEEEEEEC
T ss_pred eEEEEcCC-CCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 99998553 3332 1222 689999999999999998864
No 217
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=98.75 E-value=5.7e-09 Score=79.19 Aligned_cols=83 Identities=11% Similarity=0.116 Sum_probs=56.7
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCcccc--ccceeeeeecCCcccc---------------------------cCCCCC-C
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFR--EERVNAFVCNVVNDDL---------------------------SRNVNP-S 120 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~--~~~~~~~~~D~~~~~~---------------------------~~~~~~-~ 120 (231)
.++.+|||||||+|.++..++...... ....+++++|+++.++ ..++++ +
T Consensus 83 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 162 (227)
T 1r18_A 83 KPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPPNA 162 (227)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCGGGC
T ss_pred CCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccCCCcCC
Confidence 677899999999999998887421100 0012445555543321 012333 7
Q ss_pred CeeEEEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEec
Q 045799 121 SVDVVTLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDY 161 (231)
Q Consensus 121 ~fD~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~ 161 (231)
+||+|++..++++++ +++.+.|||||.+++...
T Consensus 163 ~fD~I~~~~~~~~~~--------~~~~~~LkpgG~lvi~~~ 195 (227)
T 1r18_A 163 PYNAIHVGAAAPDTP--------TELINQLASGGRLIVPVG 195 (227)
T ss_dssp SEEEEEECSCBSSCC--------HHHHHTEEEEEEEEEEES
T ss_pred CccEEEECCchHHHH--------HHHHHHhcCCCEEEEEEe
Confidence 899999999988873 678999999999998754
No 218
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.74 E-value=9.9e-09 Score=81.95 Aligned_cols=86 Identities=23% Similarity=0.290 Sum_probs=56.4
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC----------------------------CCCCCCe
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR----------------------------NVNPSSV 122 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~----------------------------~~~~~~f 122 (231)
.++.+|||||||+|..+..++.... ..+++++|+++.++.. +..+++|
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~~----~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~f 190 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYKS----VENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTY 190 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCTT----CCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCE
T ss_pred CCCCEEEEEcCCccHHHHHHHHcCC----CCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCc
Confidence 4568999999999999999884321 2244555554332210 1124689
Q ss_pred eEEEEeeeeeccCCCCH--HHHHHHHHHhcCCCeEEEEEe
Q 045799 123 DVVTLIFMLSAVSPKKM--PLILQNIKAVLKPDGYILVCD 160 (231)
Q Consensus 123 D~ii~~~~l~~~~~~~~--~~~l~~~~~~Lk~gG~l~i~~ 160 (231)
|+|++...-..-+.... ..+++.+++.|+|||++++..
T Consensus 191 DvIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 230 (321)
T 2pt6_A 191 DVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 230 (321)
T ss_dssp EEEEEECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEE
T ss_pred eEEEECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 99998643211111122 789999999999999999864
No 219
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=98.74 E-value=9e-09 Score=77.94 Aligned_cols=81 Identities=15% Similarity=0.131 Sum_probs=55.2
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc----------------------------CCCCCCCe
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS----------------------------RNVNPSSV 122 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~----------------------------~~~~~~~f 122 (231)
.++.+|||+|||+|..+..++.... ...+++++|+++.++. ....+++|
T Consensus 76 ~~~~~vLDiG~G~G~~~~~la~~~~---~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~f 152 (226)
T 1i1n_A 76 HEGAKALDVGSGSGILTACFARMVG---CTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPY 152 (226)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHC---TTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHHhC---CCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCCCc
Confidence 6788999999999999988873210 0123444444332210 01235689
Q ss_pred eEEEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEecc
Q 045799 123 DVVTLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYA 162 (231)
Q Consensus 123 D~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~ 162 (231)
|+|++...++++ +.++.++|||||.+++....
T Consensus 153 D~i~~~~~~~~~--------~~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 153 DAIHVGAAAPVV--------PQALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp EEEEECSBBSSC--------CHHHHHTEEEEEEEEEEESC
T ss_pred CEEEECCchHHH--------HHHHHHhcCCCcEEEEEEec
Confidence 999999888766 25788999999999987543
No 220
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.72 E-value=1.1e-07 Score=74.13 Aligned_cols=110 Identities=9% Similarity=0.094 Sum_probs=72.6
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC-----------------------CCCCCCeeEEEE
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR-----------------------NVNPSSVDVVTL 127 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~-----------------------~~~~~~fD~ii~ 127 (231)
.++.+|||+|||+|.++..++... ..+++++|+++..+.. -...+.||.|++
T Consensus 124 ~~g~~VlD~~aG~G~~~i~~a~~g-----~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~~~~~D~Vi~ 198 (278)
T 3k6r_A 124 KPDELVVDMFAGIGHLSLPIAVYG-----KAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILM 198 (278)
T ss_dssp CTTCEEEETTCTTTTTTHHHHHHT-----CCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEEE
T ss_pred CCCCEEEEecCcCcHHHHHHHHhc-----CCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhccccCCCEEEE
Confidence 678999999999999999887321 1244555555443321 123568999987
Q ss_pred eeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeEEEeeCHHHHHHHHHHcC
Q 045799 128 IFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYFSEDFLSTLFLEAG 207 (231)
Q Consensus 128 ~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~G 207 (231)
.. +.....++..+.++|++||.+.+.++....... ....+.+.+..++.|
T Consensus 199 ~~------p~~~~~~l~~a~~~lk~gG~ih~~~~~~e~~~~------------------------~~~~e~i~~~~~~~g 248 (278)
T 3k6r_A 199 GY------VVRTHEFIPKALSIAKDGAIIHYHNTVPEKLMP------------------------REPFETFKRITKEYG 248 (278)
T ss_dssp CC------CSSGGGGHHHHHHHEEEEEEEEEEEEEEGGGTT------------------------TTTHHHHHHHHHHTT
T ss_pred CC------CCcHHHHHHHHHHHcCCCCEEEEEeeecccccc------------------------hhHHHHHHHHHHHcC
Confidence 43 134456888899999999998776543322110 013467788888999
Q ss_pred ceEEEEEE
Q 045799 208 FSTVDINI 215 (231)
Q Consensus 208 f~~~~~~~ 215 (231)
+++..+..
T Consensus 249 ~~v~~~~~ 256 (278)
T 3k6r_A 249 YDVEKLNE 256 (278)
T ss_dssp CEEEEEEE
T ss_pred CcEEEEEE
Confidence 98765543
No 221
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.72 E-value=1.5e-08 Score=79.96 Aligned_cols=86 Identities=23% Similarity=0.239 Sum_probs=54.1
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc----------------------------CCCCCCCe
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS----------------------------RNVNPSSV 122 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~----------------------------~~~~~~~f 122 (231)
.++.+|||||||+|..+..++.... ..+++++|+++.++. .+..+++|
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~~----~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~f 164 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHDS----VEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEF 164 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTSTT----CSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCE
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcCC----CCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCc
Confidence 3458999999999999999984411 123444444432210 01135689
Q ss_pred eEEEEeeeeeccC-CC--CHHHHHHHHHHhcCCCeEEEEEe
Q 045799 123 DVVTLIFMLSAVS-PK--KMPLILQNIKAVLKPDGYILVCD 160 (231)
Q Consensus 123 D~ii~~~~l~~~~-~~--~~~~~l~~~~~~Lk~gG~l~i~~ 160 (231)
|+|++...-+.+. .. ....+++.+++.|+|||++++..
T Consensus 165 D~Ii~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 205 (296)
T 1inl_A 165 DVIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAET 205 (296)
T ss_dssp EEEEEEC----------CCSHHHHHHHHHHEEEEEEEEEEC
T ss_pred eEEEEcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 9999854322121 11 23789999999999999999864
No 222
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=98.71 E-value=1.8e-08 Score=78.79 Aligned_cols=84 Identities=19% Similarity=0.200 Sum_probs=57.0
Q ss_pred CCCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccc--------------------------cCCCCCCCee
Q 045799 70 NGNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDL--------------------------SRNVNPSSVD 123 (231)
Q Consensus 70 ~~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~--------------------------~~~~~~~~fD 123 (231)
..++.+|||+|||+|.++..++.... ...+++++|+++.++ ..++++++||
T Consensus 97 ~~~~~~vLdiG~G~G~~~~~l~~~~~---~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~~~~~~D 173 (280)
T 1i9g_A 97 IFPGARVLEAGAGSGALTLSLLRAVG---PAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSELPDGSVD 173 (280)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHC---TTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCCCTTCEE
T ss_pred CCCCCEEEEEcccccHHHHHHHHHhC---CCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCCCCCcee
Confidence 36778999999999999988873210 011333344332110 1134567899
Q ss_pred EEEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccC
Q 045799 124 VVTLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAI 163 (231)
Q Consensus 124 ~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~ 163 (231)
+|++ ++ .++..+++++.++|+|||.+++.....
T Consensus 174 ~v~~-----~~--~~~~~~l~~~~~~L~pgG~l~~~~~~~ 206 (280)
T 1i9g_A 174 RAVL-----DM--LAPWEVLDAVSRLLVAGGVLMVYVATV 206 (280)
T ss_dssp EEEE-----ES--SCGGGGHHHHHHHEEEEEEEEEEESSH
T ss_pred EEEE-----CC--cCHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 9998 34 456789999999999999999976443
No 223
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.71 E-value=3.8e-09 Score=88.78 Aligned_cols=81 Identities=23% Similarity=0.316 Sum_probs=59.4
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc------------------------CCCCCCCeeEEE
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS------------------------RNVNPSSVDVVT 126 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~------------------------~~~~~~~fD~ii 126 (231)
.++.+|||||||+|.++..++... ..+++++|++. ++. .++ .++||+|+
T Consensus 157 ~~~~~VLDiGcGtG~la~~la~~~-----~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~-~~~fD~Iv 229 (480)
T 3b3j_A 157 FKDKIVLDVGCGSGILSFFAAQAG-----ARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSL-PEQVDIII 229 (480)
T ss_dssp TTTCEEEEESCSTTHHHHHHHHTT-----CSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCCC-SSCEEEEE
T ss_pred cCCCEEEEecCcccHHHHHHHHcC-----CCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCcc-CCCeEEEE
Confidence 457899999999999998877421 22455666654 221 012 25899999
Q ss_pred EeeeeeccCCCCHHHHHHHHHHhcCCCeEEEE
Q 045799 127 LIFMLSAVSPKKMPLILQNIKAVLKPDGYILV 158 (231)
Q Consensus 127 ~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i 158 (231)
+..+++|+..++....+..+.+.|+|||.+++
T Consensus 230 s~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 230 SEPMGYMLFNERMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp CCCCHHHHTCHHHHHHHHHGGGGEEEEEEEES
T ss_pred EeCchHhcCcHHHHHHHHHHHHhcCCCCEEEE
Confidence 98887887655667788899999999999985
No 224
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=98.71 E-value=1e-08 Score=78.95 Aligned_cols=83 Identities=14% Similarity=0.137 Sum_probs=59.1
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC-------------------------C-C-----CC
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR-------------------------N-V-----NP 119 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~-------------------------~-~-----~~ 119 (231)
.++.+|||||||+|..+..++... . .+.+++++|+++.++.. + + ++
T Consensus 78 ~~~~~VLeiG~G~G~~~~~la~~~--~-~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~ 154 (247)
T 1sui_A 78 INAKNTMEIGVYTGYSLLATALAI--P-EDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNH 154 (247)
T ss_dssp TTCCEEEEECCGGGHHHHHHHHHS--C-TTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGT
T ss_pred hCcCEEEEeCCCcCHHHHHHHHhC--C-CCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCC
Confidence 456799999999999999887421 1 12355666666543210 1 1 15
Q ss_pred CCeeEEEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEec
Q 045799 120 SSVDVVTLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDY 161 (231)
Q Consensus 120 ~~fD~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~ 161 (231)
++||+|++... ..+...+++.+.++|+|||++++.+.
T Consensus 155 ~~fD~V~~d~~-----~~~~~~~l~~~~~~LkpGG~lv~d~~ 191 (247)
T 1sui_A 155 GSYDFIFVDAD-----KDNYLNYHKRLIDLVKVGGVIGYDNT 191 (247)
T ss_dssp TCBSEEEECSC-----STTHHHHHHHHHHHBCTTCCEEEECT
T ss_pred CCEEEEEEcCc-----hHHHHHHHHHHHHhCCCCeEEEEecC
Confidence 78999998643 25678899999999999999988653
No 225
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.69 E-value=1.9e-08 Score=81.60 Aligned_cols=80 Identities=20% Similarity=0.259 Sum_probs=53.1
Q ss_pred CCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc------------------------CCCCCCCeeEEEE
Q 045799 72 NPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS------------------------RNVNPSSVDVVTL 127 (231)
Q Consensus 72 ~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~------------------------~~~~~~~fD~ii~ 127 (231)
+++.|||||||+|.++...+... ..+++++|.+. +.. ..+ ++++|+||+
T Consensus 83 ~~k~VLDvG~GtGiLs~~Aa~aG-----A~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~l-pe~~Dvivs 155 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSIFCAQAG-----ARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVEL-PEQVDAIVS 155 (376)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTT-----CSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCCC-SSCEEEEEC
T ss_pred CCCEEEEeCCCccHHHHHHHHhC-----CCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeecC-CccccEEEe
Confidence 57899999999998886655221 11345555542 211 022 368999998
Q ss_pred eeeeeccC-CCCHHHHHHHHHHhcCCCeEEEE
Q 045799 128 IFMLSAVS-PKKMPLILQNIKAVLKPDGYILV 158 (231)
Q Consensus 128 ~~~l~~~~-~~~~~~~l~~~~~~Lk~gG~l~i 158 (231)
-.+-..+. +..+..++....+.|+|||.++.
T Consensus 156 E~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 156 EWMGYGLLHESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp CCCBTTBTTTCSHHHHHHHHHHHEEEEEEEES
T ss_pred ecccccccccchhhhHHHHHHhhCCCCceECC
Confidence 54433332 35678889999999999999863
No 226
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.69 E-value=7.3e-08 Score=75.53 Aligned_cols=108 Identities=16% Similarity=0.017 Sum_probs=64.2
Q ss_pred CCCCCeEEEEcCCC------CcchHHHhcCccccccceeeeeecCCccccc------------CCCCCCCeeEEEEeeee
Q 045799 70 NGNPKVVLEVGCGA------GNTIFPLVSHSEFREERVNAFVCNVVNDDLS------------RNVNPSSVDVVTLIFML 131 (231)
Q Consensus 70 ~~~~~~iLdvGcG~------G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~------------~~~~~~~fD~ii~~~~l 131 (231)
..++.+|||+|||+ |. ..++... .....++++|+++. +. .++ .++||+|++....
T Consensus 61 l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~---~~~~~V~gvDis~~-v~~v~~~i~gD~~~~~~-~~~fD~Vvsn~~~ 133 (290)
T 2xyq_A 61 VPYNMRVIHFGAGSDKGVAPGT--AVLRQWL---PTGTLLVDSDLNDF-VSDADSTLIGDCATVHT-ANKWDLIISDMYD 133 (290)
T ss_dssp CCTTCEEEEESCCCTTSBCHHH--HHHHHHS---CTTCEEEEEESSCC-BCSSSEEEESCGGGCCC-SSCEEEEEECCCC
T ss_pred CCCCCEEEEeCCCCCCCCCcHH--HHHHHHc---CCCCEEEEEECCCC-CCCCEEEEECccccCCc-cCcccEEEEcCCc
Confidence 36788999999955 54 2222111 11124556665543 10 111 3689999996432
Q ss_pred ec--------cC-CCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeEEEeeCHHHHHHH
Q 045799 132 SA--------VS-PKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYFSEDFLSTL 202 (231)
Q Consensus 132 ~~--------~~-~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 202 (231)
+. .. .+....+++.+.+.|||||.+++..+... ...++.++
T Consensus 134 ~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~------------------------------~~~~l~~~ 183 (290)
T 2xyq_A 134 PRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHS------------------------------WNADLYKL 183 (290)
T ss_dssp CC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSS------------------------------CCHHHHHH
T ss_pred cccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccC------------------------------CHHHHHHH
Confidence 11 10 12245789999999999999998643321 12367778
Q ss_pred HHHcCceEEEEE
Q 045799 203 FLEAGFSTVDIN 214 (231)
Q Consensus 203 l~~~Gf~~~~~~ 214 (231)
+++.||..+++.
T Consensus 184 l~~~GF~~v~~~ 195 (290)
T 2xyq_A 184 MGHFSWWTAFVT 195 (290)
T ss_dssp HTTEEEEEEEEE
T ss_pred HHHcCCcEEEEE
Confidence 888888765543
No 227
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=98.68 E-value=1.8e-08 Score=76.39 Aligned_cols=84 Identities=15% Similarity=0.176 Sum_probs=59.6
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC--------------------------CCC----CC
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR--------------------------NVN----PS 120 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~--------------------------~~~----~~ 120 (231)
.++.+|||+|||+|..+..++.... ...+++++|+++.++.. .+. .+
T Consensus 68 ~~~~~vLdiG~G~G~~~~~la~~~~---~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~ 144 (229)
T 2avd_A 68 IQAKKALDLGTFTGYSALALALALP---ADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAG 144 (229)
T ss_dssp TTCCEEEEECCTTSHHHHHHHTTSC---TTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTT
T ss_pred cCCCEEEEEcCCccHHHHHHHHhCC---CCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCC
Confidence 4568999999999999999884321 12355666766543210 011 16
Q ss_pred CeeEEEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEecc
Q 045799 121 SVDVVTLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYA 162 (231)
Q Consensus 121 ~fD~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~ 162 (231)
+||+|++... ......+++.+.++|+|||++++.+..
T Consensus 145 ~~D~v~~d~~-----~~~~~~~l~~~~~~L~pgG~lv~~~~~ 181 (229)
T 2avd_A 145 TFDVAVVDAD-----KENCSAYYERCLQLLRPGGILAVLRVL 181 (229)
T ss_dssp CEEEEEECSC-----STTHHHHHHHHHHHEEEEEEEEEECCS
T ss_pred CccEEEECCC-----HHHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 8999998543 366788999999999999999987543
No 228
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.67 E-value=1.3e-08 Score=79.77 Aligned_cols=84 Identities=18% Similarity=0.215 Sum_probs=55.0
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc--------------------C--------------C
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS--------------------R--------------N 116 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~--------------------~--------------~ 116 (231)
.++.+|||||||+|..+..++.. . ..+++++|+++.++. . +
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~-~----~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~ 148 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQH-D----VDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIK 148 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTS-C----CSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHH
T ss_pred CCCCeEEEEcCCcCHHHHHHHhC-C----CCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhc
Confidence 45689999999999999998754 1 123445554432210 0 0
Q ss_pred CCCCCeeEEEEeeeeeccCCCC--HHHHHHHHHHhcCCCeEEEEEe
Q 045799 117 VNPSSVDVVTLIFMLSAVSPKK--MPLILQNIKAVLKPDGYILVCD 160 (231)
Q Consensus 117 ~~~~~fD~ii~~~~l~~~~~~~--~~~~l~~~~~~Lk~gG~l~i~~ 160 (231)
. +++||+|++....+.-+... ...+++.+++.|+|||++++..
T Consensus 149 ~-~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 193 (281)
T 1mjf_A 149 N-NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQA 193 (281)
T ss_dssp H-CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred c-cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 1 46899999865432222122 3788999999999999998864
No 229
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.67 E-value=3.7e-08 Score=76.33 Aligned_cols=76 Identities=16% Similarity=0.059 Sum_probs=54.8
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC-------------------------CCCCCCeeEE
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR-------------------------NVNPSSVDVV 125 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~-------------------------~~~~~~fD~i 125 (231)
+.+.+|||||||+|..+..++.. . .++..+|+++.++.. .+. ++||+|
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~-~-----~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~-~~fD~I 143 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKY-D-----THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI-KKYDLI 143 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTS-S-----CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC-CCEEEE
T ss_pred CCCCEEEEEeCCcCHHHHHHHhC-C-----CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH-hhCCEE
Confidence 45689999999999999988754 2 245566665443321 011 579999
Q ss_pred EEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEe
Q 045799 126 TLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCD 160 (231)
Q Consensus 126 i~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~ 160 (231)
++. . .++..+++.+++.|+|||++++..
T Consensus 144 i~d-----~--~dp~~~~~~~~~~L~pgG~lv~~~ 171 (262)
T 2cmg_A 144 FCL-----Q--EPDIHRIDGLKRMLKEDGVFISVA 171 (262)
T ss_dssp EES-----S--CCCHHHHHHHHTTEEEEEEEEEEE
T ss_pred EEC-----C--CChHHHHHHHHHhcCCCcEEEEEc
Confidence 985 2 345569999999999999998864
No 230
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.66 E-value=6e-08 Score=80.55 Aligned_cols=91 Identities=15% Similarity=0.244 Sum_probs=60.7
Q ss_pred CCCCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC----------------------C--CCCCCeeE
Q 045799 69 PNGNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR----------------------N--VNPSSVDV 124 (231)
Q Consensus 69 ~~~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~----------------------~--~~~~~fD~ 124 (231)
...++.+|||+|||+|..+..++.... +..++++|++...+.. + +++++||+
T Consensus 243 ~~~~g~~VLDlgaG~G~~t~~la~~~~----~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~~~~~~~fD~ 318 (429)
T 1sqg_A 243 APQNGEHILDLCAAPGGKTTHILEVAP----EAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDR 318 (429)
T ss_dssp CCCTTCEEEEESCTTCHHHHHHHHHCT----TCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHHHTTCCEEE
T ss_pred CCCCcCeEEEECCCchHHHHHHHHHcC----CCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchhhcccCCCCE
Confidence 346788999999999999999884321 1345666665543311 0 23468999
Q ss_pred EEEe------eeeeccCC-------CCH-------HHHHHHHHHhcCCCeEEEEEeccC
Q 045799 125 VTLI------FMLSAVSP-------KKM-------PLILQNIKAVLKPDGYILVCDYAI 163 (231)
Q Consensus 125 ii~~------~~l~~~~~-------~~~-------~~~l~~~~~~Lk~gG~l~i~~~~~ 163 (231)
|++. .++++.|. ++. ..++..+.+.|||||.+++++.+.
T Consensus 319 Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~ 377 (429)
T 1sqg_A 319 ILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSV 377 (429)
T ss_dssp EEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCC
T ss_pred EEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 9973 23333321 111 478999999999999999986544
No 231
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=98.64 E-value=9.7e-08 Score=77.83 Aligned_cols=107 Identities=14% Similarity=0.143 Sum_probs=67.9
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc------------------------CCCCCCCeeEEE
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS------------------------RNVNPSSVDVVT 126 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~------------------------~~~~~~~fD~ii 126 (231)
.++.+|||+|||+|.++..++.... ..+++++|+++.++. .++++++||+|+
T Consensus 216 ~~~~~vLD~gCGsG~~~i~~a~~~~----~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~~~~fD~Ii 291 (373)
T 3tm4_A 216 LDGGSVLDPMCGSGTILIELALRRY----SGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQYVDSVDFAI 291 (373)
T ss_dssp CCSCCEEETTCTTCHHHHHHHHTTC----CSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGGTCSCEEEEE
T ss_pred CCCCEEEEccCcCcHHHHHHHHhCC----CCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCcccCCcCEEE
Confidence 5678999999999999998874422 114456666554432 134567999999
Q ss_pred EeeeeeccC--CCC----HHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeEEEeeCHHHHH
Q 045799 127 LIFMLSAVS--PKK----MPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYFSEDFLS 200 (231)
Q Consensus 127 ~~~~l~~~~--~~~----~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 200 (231)
++-.+..-. ... ...+++.+.++| +|+.+++. .+.+.+.
T Consensus 292 ~npPyg~r~~~~~~~~~ly~~~~~~l~r~l-~g~~~~i~----------------------------------~~~~~~~ 336 (373)
T 3tm4_A 292 SNLPYGLKIGKKSMIPDLYMKFFNELAKVL-EKRGVFIT----------------------------------TEKKAIE 336 (373)
T ss_dssp EECCCC------CCHHHHHHHHHHHHHHHE-EEEEEEEE----------------------------------SCHHHHH
T ss_pred ECCCCCcccCcchhHHHHHHHHHHHHHHHc-CCeEEEEE----------------------------------CCHHHHH
Confidence 965433211 112 266788888888 44444343 1446777
Q ss_pred HHHHHcCceEEEEEEE
Q 045799 201 TLFLEAGFSTVDINIH 216 (231)
Q Consensus 201 ~~l~~~Gf~~~~~~~~ 216 (231)
+.+.+.||++.+....
T Consensus 337 ~~~~~~G~~~~~~~~~ 352 (373)
T 3tm4_A 337 EAIAENGFEIIHHRVI 352 (373)
T ss_dssp HHHHHTTEEEEEEEEE
T ss_pred HHHHHcCCEEEEEEEE
Confidence 8888889988775443
No 232
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.63 E-value=4.2e-08 Score=81.77 Aligned_cols=91 Identities=13% Similarity=0.114 Sum_probs=59.5
Q ss_pred CCCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC----------------------C-CCCCCeeEEE
Q 045799 70 NGNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR----------------------N-VNPSSVDVVT 126 (231)
Q Consensus 70 ~~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~----------------------~-~~~~~fD~ii 126 (231)
..++.+|||+|||+|..+..++.... . ...++++|++..++.. + ..+++||+|+
T Consensus 99 ~~~g~~VLDlgaGpG~kt~~LA~~~~--~-~g~V~AvDis~~~l~~a~~n~~r~G~~v~~~~~Da~~l~~~~~~~FD~Il 175 (464)
T 3m6w_A 99 PKPGERVLDLAAAPGGKTTHLAARMG--G-KGLLLANEVDGKRVRGLLENVERWGAPLAVTQAPPRALAEAFGTYFHRVL 175 (464)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTT--T-CSEEEEECSCHHHHHHHHHHHHHHCCCCEEECSCHHHHHHHHCSCEEEEE
T ss_pred cCCCCEEEEEcCCcCHHHHHHHHhCC--C-CCEEEEEECCHHHHHHHHHHHHHcCCeEEEEECCHHHhhhhccccCCEEE
Confidence 36788999999999999999983211 1 1245666666544321 1 1257899999
Q ss_pred Ee------eeeeccCC-------CC-------HHHHHHHHHHhcCCCeEEEEEeccC
Q 045799 127 LI------FMLSAVSP-------KK-------MPLILQNIKAVLKPDGYILVCDYAI 163 (231)
Q Consensus 127 ~~------~~l~~~~~-------~~-------~~~~l~~~~~~Lk~gG~l~i~~~~~ 163 (231)
+. .++.+-|. ++ ...++..+.++|||||.++.++.+.
T Consensus 176 ~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~ 232 (464)
T 3m6w_A 176 LDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTF 232 (464)
T ss_dssp EECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred ECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccC
Confidence 62 22322211 11 2678999999999999999875443
No 233
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=98.62 E-value=4.6e-08 Score=74.73 Aligned_cols=83 Identities=22% Similarity=0.287 Sum_probs=56.5
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccc-------------------------------------
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDL------------------------------------- 113 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~------------------------------------- 113 (231)
.++.+|||||||+|..+..++.... ...+++++|+++.++
T Consensus 59 ~~~~~VLdiG~G~G~~~~~la~~~~---~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~ 135 (239)
T 2hnk_A 59 SGAKRIIEIGTFTGYSSLCFASALP---EDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAP 135 (239)
T ss_dssp HTCSEEEEECCTTCHHHHHHHHHSC---TTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCC
T ss_pred hCcCEEEEEeCCCCHHHHHHHHhCC---CCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhcccc
Confidence 4578999999999999998873211 012334444433221
Q ss_pred --cCCCCC--CCeeEEEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEec
Q 045799 114 --SRNVNP--SSVDVVTLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDY 161 (231)
Q Consensus 114 --~~~~~~--~~fD~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~ 161 (231)
...+++ ++||+|++.... ++...+++.+.++|+|||++++.+.
T Consensus 136 ~~~~~f~~~~~~fD~I~~~~~~-----~~~~~~l~~~~~~L~pgG~lv~~~~ 182 (239)
T 2hnk_A 136 SWASDFAFGPSSIDLFFLDADK-----ENYPNYYPLILKLLKPGGLLIADNV 182 (239)
T ss_dssp GGGTTTCCSTTCEEEEEECSCG-----GGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred cccccccCCCCCcCEEEEeCCH-----HHHHHHHHHHHHHcCCCeEEEEEcc
Confidence 011222 789999987543 4566899999999999999998753
No 234
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=98.60 E-value=2.8e-08 Score=75.25 Aligned_cols=83 Identities=13% Similarity=0.138 Sum_probs=55.6
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCcc-ccccceeeeeecCCccccc----------------------------CC----C
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSE-FREERVNAFVCNVVNDDLS----------------------------RN----V 117 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~-~~~~~~~~~~~D~~~~~~~----------------------------~~----~ 117 (231)
.++.+|||||||+|.++..++.... ......+++++|+++.++. .. .
T Consensus 79 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 158 (227)
T 2pbf_A 79 KPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKK 158 (227)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHH
T ss_pred CCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCc
Confidence 6678999999999999988874221 0001124455555432210 01 2
Q ss_pred CCCCeeEEEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEec
Q 045799 118 NPSSVDVVTLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDY 161 (231)
Q Consensus 118 ~~~~fD~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~ 161 (231)
..++||+|++...++++ ++.+.++|+|||++++...
T Consensus 159 ~~~~fD~I~~~~~~~~~--------~~~~~~~LkpgG~lv~~~~ 194 (227)
T 2pbf_A 159 ELGLFDAIHVGASASEL--------PEILVDLLAENGKLIIPIE 194 (227)
T ss_dssp HHCCEEEEEECSBBSSC--------CHHHHHHEEEEEEEEEEEE
T ss_pred cCCCcCEEEECCchHHH--------HHHHHHhcCCCcEEEEEEc
Confidence 34689999999988876 3678999999999998754
No 235
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=98.59 E-value=6.1e-08 Score=74.04 Aligned_cols=83 Identities=13% Similarity=0.070 Sum_probs=57.4
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC--------------------------CC-----CC
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR--------------------------NV-----NP 119 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~--------------------------~~-----~~ 119 (231)
.++.+|||||||+|..+..++.... .+.+++++|+++.++.. .+ +.
T Consensus 69 ~~~~~VLeiG~G~G~~~~~la~~~~---~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~ 145 (237)
T 3c3y_A 69 VNAKKTIEVGVFTGYSLLLTALSIP---DDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESE 145 (237)
T ss_dssp TTCCEEEEECCTTSHHHHHHHHHSC---TTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCT
T ss_pred hCCCEEEEeCCCCCHHHHHHHHhCC---CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCC
Confidence 4567999999999999999873211 12245555555433210 01 25
Q ss_pred CCeeEEEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEec
Q 045799 120 SSVDVVTLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDY 161 (231)
Q Consensus 120 ~~fD~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~ 161 (231)
++||+|++... ..+...+++.+.++|+|||++++.+.
T Consensus 146 ~~fD~I~~d~~-----~~~~~~~l~~~~~~L~pGG~lv~d~~ 182 (237)
T 3c3y_A 146 GSYDFGFVDAD-----KPNYIKYHERLMKLVKVGGIVAYDNT 182 (237)
T ss_dssp TCEEEEEECSC-----GGGHHHHHHHHHHHEEEEEEEEEECT
T ss_pred CCcCEEEECCc-----hHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 78999997532 24678899999999999999988654
No 236
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.58 E-value=5e-08 Score=79.83 Aligned_cols=86 Identities=10% Similarity=0.071 Sum_probs=55.5
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC-----------------------------CCCCCC
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR-----------------------------NVNPSS 121 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~-----------------------------~~~~~~ 121 (231)
.++.+|||+|||+|.++..++... ..+++++|+++.++.. ....++
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~g-----a~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~ 285 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGG-----AMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLT 285 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTT-----BSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCC
T ss_pred cCCCeEEEEeeccCHHHHHHHHCC-----CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCC
Confidence 456899999999999999988421 1145566655544310 001358
Q ss_pred eeEEEEeeee-----eccC--CCCHHHHHHHHHHhcCCCeEEEEEec
Q 045799 122 VDVVTLIFML-----SAVS--PKKMPLILQNIKAVLKPDGYILVCDY 161 (231)
Q Consensus 122 fD~ii~~~~l-----~~~~--~~~~~~~l~~~~~~Lk~gG~l~i~~~ 161 (231)
||+|++.-.. .+.. ......++..+.++|+|||.+++...
T Consensus 286 fD~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~ 332 (385)
T 2b78_A 286 YDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTN 332 (385)
T ss_dssp EEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred ccEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 9999984221 1221 02345577888999999999988753
No 237
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.57 E-value=5e-08 Score=79.81 Aligned_cols=85 Identities=16% Similarity=0.110 Sum_probs=56.6
Q ss_pred CCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC-------------------------CC--CCCCeeE
Q 045799 72 NPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR-------------------------NV--NPSSVDV 124 (231)
Q Consensus 72 ~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~-------------------------~~--~~~~fD~ 124 (231)
++.+|||+|||+|.++..++.. ..+++++|+++.++.. .+ .+++||+
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~------~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~ 282 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG------FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDL 282 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH------EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred CCCeEEEeeeccCHHHHHHHHh------CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeE
Confidence 4679999999999999998743 1245566665443321 00 2568999
Q ss_pred EEEeeeeeccCC-------CCHHHHHHHHHHhcCCCeEEEEEecc
Q 045799 125 VTLIFMLSAVSP-------KKMPLILQNIKAVLKPDGYILVCDYA 162 (231)
Q Consensus 125 ii~~~~l~~~~~-------~~~~~~l~~~~~~Lk~gG~l~i~~~~ 162 (231)
|++.-.....+. .....++..+.++|+|||.+++.+..
T Consensus 283 Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 327 (382)
T 1wxx_A 283 VVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCS 327 (382)
T ss_dssp EEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred EEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 998321111100 34567899999999999999987543
No 238
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=98.57 E-value=3.1e-08 Score=77.74 Aligned_cols=81 Identities=11% Similarity=0.101 Sum_probs=54.8
Q ss_pred CCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC-----------------------CCCCCCe---eEE
Q 045799 72 NPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR-----------------------NVNPSSV---DVV 125 (231)
Q Consensus 72 ~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~-----------------------~~~~~~f---D~i 125 (231)
++.+|||+|||+|..+..++.. . ..+++++|+++.++.. ++ .++| |+|
T Consensus 123 ~~~~vLDlG~GsG~~~~~la~~-~----~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~~-~~~f~~~D~I 196 (284)
T 1nv8_A 123 GIKTVADIGTGSGAIGVSVAKF-S----DAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPF-KEKFASIEMI 196 (284)
T ss_dssp TCCEEEEESCTTSHHHHHHHHH-S----SCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGG-GGGTTTCCEE
T ss_pred CCCEEEEEeCchhHHHHHHHHC-C----CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhhc-ccccCCCCEE
Confidence 5579999999999999988743 1 3355666666544321 11 1478 999
Q ss_pred EEee------------eeeccC------CCCHHHHHHHHH-HhcCCCeEEEEE
Q 045799 126 TLIF------------MLSAVS------PKKMPLILQNIK-AVLKPDGYILVC 159 (231)
Q Consensus 126 i~~~------------~l~~~~------~~~~~~~l~~~~-~~Lk~gG~l~i~ 159 (231)
+++- +. |-| ..+...+++++. +.|+|||.+++.
T Consensus 197 vsnPPyi~~~~~l~~~v~-~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e 248 (284)
T 1nv8_A 197 LSNPPYVKSSAHLPKDVL-FEPPEALFGGEDGLDFYREFFGRYDTSGKIVLME 248 (284)
T ss_dssp EECCCCBCGGGSCTTSCC-CSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEE
T ss_pred EEcCCCCCcccccChhhc-cCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEE
Confidence 9961 22 221 112237899999 999999999875
No 239
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.55 E-value=5.8e-08 Score=80.79 Aligned_cols=91 Identities=11% Similarity=0.078 Sum_probs=58.2
Q ss_pred CCCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC------------------------CCCCCCeeEE
Q 045799 70 NGNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR------------------------NVNPSSVDVV 125 (231)
Q Consensus 70 ~~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~------------------------~~~~~~fD~i 125 (231)
..++.+|||+|||+|..+..++.... . ...++++|++..++.. ...+++||+|
T Consensus 103 ~~~g~~VLDlcaGpGgkt~~lA~~~~--~-~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~~~~~FD~I 179 (456)
T 3m4x_A 103 AKPGEKVLDLCAAPGGKSTQLAAQMK--G-KGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPHFSGFFDRI 179 (456)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHT--T-CSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHHHTTCEEEE
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHcC--C-CCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhhccccCCEE
Confidence 36788999999999999998873211 0 1245566666544321 1124689999
Q ss_pred EEeee---eeccC----------CC-------CHHHHHHHHHHhcCCCeEEEEEeccC
Q 045799 126 TLIFM---LSAVS----------PK-------KMPLILQNIKAVLKPDGYILVCDYAI 163 (231)
Q Consensus 126 i~~~~---l~~~~----------~~-------~~~~~l~~~~~~Lk~gG~l~i~~~~~ 163 (231)
++..- ...+. ++ ....++..+.++|||||.++.++.+.
T Consensus 180 l~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~ 237 (456)
T 3m4x_A 180 VVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTF 237 (456)
T ss_dssp EEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCC
T ss_pred EECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeec
Confidence 98431 11111 01 11378999999999999998876444
No 240
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.55 E-value=3.3e-08 Score=79.72 Aligned_cols=90 Identities=21% Similarity=0.275 Sum_probs=61.5
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCcccc-ccceeeeeecCCcccccC---------------------CCCCCCeeEEEEe
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFR-EERVNAFVCNVVNDDLSR---------------------NVNPSSVDVVTLI 128 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~-~~~~~~~~~D~~~~~~~~---------------------~~~~~~fD~ii~~ 128 (231)
.++.+|||+|||+|.++..++...... ....+++++|+++.++.. +...++||+|+++
T Consensus 129 ~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~~D~l~~~~~~~fD~Ii~N 208 (344)
T 2f8l_A 129 KKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLHQDGLANLLVDPVDVVISD 208 (344)
T ss_dssp CSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCTTSCCCCCCEEEEEEE
T ss_pred CCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCCceEEECCCCCccccCCccEEEEC
Confidence 456899999999999998886321100 012466777776544311 2234789999998
Q ss_pred eeeeccCCCC---------------H-HHHHHHHHHhcCCCeEEEEEe
Q 045799 129 FMLSAVSPKK---------------M-PLILQNIKAVLKPDGYILVCD 160 (231)
Q Consensus 129 ~~l~~~~~~~---------------~-~~~l~~~~~~Lk~gG~l~i~~ 160 (231)
-.+++++.++ . ..+++.+.+.|+|||++++..
T Consensus 209 PPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~ 256 (344)
T 2f8l_A 209 LPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLV 256 (344)
T ss_dssp CCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEE
Confidence 8776663221 1 268999999999999998875
No 241
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=98.54 E-value=9.1e-08 Score=77.47 Aligned_cols=87 Identities=15% Similarity=0.038 Sum_probs=57.0
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc-----------------------CCCCCCCeeEEEE
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS-----------------------RNVNPSSVDVVTL 127 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~-----------------------~~~~~~~fD~ii~ 127 (231)
.++..|||+|||+|.++..++.... ....++++|+++.++. .+.+.+.||+|++
T Consensus 202 ~~~~~vLD~gcGsG~~~ie~a~~~~---~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~~~~~~D~Ii~ 278 (354)
T 3tma_A 202 RPGMRVLDPFTGSGTIALEAASTLG---PTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPRFFPEVDRILA 278 (354)
T ss_dssp CTTCCEEESSCTTSHHHHHHHHHHC---TTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGGTCCCCSEEEE
T ss_pred CCCCEEEeCCCCcCHHHHHHHHhhC---CCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCccccCCCCEEEE
Confidence 5678999999999999988874210 0234455555543331 1223467899999
Q ss_pred eeeeeccCC------CCHHHHHHHHHHhcCCCeEEEEEe
Q 045799 128 IFMLSAVSP------KKMPLILQNIKAVLKPDGYILVCD 160 (231)
Q Consensus 128 ~~~l~~~~~------~~~~~~l~~~~~~Lk~gG~l~i~~ 160 (231)
.-....-.. +....+++.+.+.|+|||.+++.+
T Consensus 279 npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t 317 (354)
T 3tma_A 279 NPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLT 317 (354)
T ss_dssp CCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEE
T ss_pred CCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 544332110 113678999999999999999874
No 242
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.52 E-value=1.6e-07 Score=77.22 Aligned_cols=84 Identities=14% Similarity=0.078 Sum_probs=56.2
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc-----------------------------CCCCCCC
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS-----------------------------RNVNPSS 121 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~-----------------------------~~~~~~~ 121 (231)
.++.+|||+|||+|.++..++... ..+++++|+++.++. ....+++
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g-----~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~ 293 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGG-----CSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEK 293 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTT-----CSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCC
T ss_pred hCCCeEEEeeccCCHHHHHHHHCC-----CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCC
Confidence 456899999999999999998431 013444554432210 0001468
Q ss_pred eeEEEEeee---------eeccCCCCHHHHHHHHHHhcCCCeEEEEEec
Q 045799 122 VDVVTLIFM---------LSAVSPKKMPLILQNIKAVLKPDGYILVCDY 161 (231)
Q Consensus 122 fD~ii~~~~---------l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~ 161 (231)
||+|++.-. .... .....++..+.+.|+|||.+++++.
T Consensus 294 fD~Ii~dpP~~~~~~~~~~~~~--~~~~~~l~~~~~~LkpgG~l~~~~~ 340 (396)
T 3c0k_A 294 FDVIVMDPPKFVENKSQLMGAC--RGYKDINMLAIQLLNEGGILLTFSC 340 (396)
T ss_dssp EEEEEECCSSTTTCSSSSSCCC--THHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred CCEEEECCCCCCCChhHHHHHH--HHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 999998531 1222 5677899999999999999998753
No 243
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.52 E-value=3.2e-07 Score=73.72 Aligned_cols=79 Identities=13% Similarity=0.186 Sum_probs=55.8
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC----------------------CCCCCCeeEEEEe
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR----------------------NVNPSSVDVVTLI 128 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~----------------------~~~~~~fD~ii~~ 128 (231)
.++.+|||+|||+|.++.. +.. ..+++++|+++.++.. .+. ++||+|++.
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~~------~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~-~~fD~Vi~d 265 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CKN------AKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD-VKGNRVIMN 265 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TTT------SSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC-CCEEEEEEC
T ss_pred CCCCEEEEccCccCHHHHh-ccC------CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc-CCCcEEEEC
Confidence 4678999999999999988 642 2355666666543321 112 689999973
Q ss_pred eeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccC
Q 045799 129 FMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAI 163 (231)
Q Consensus 129 ~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~ 163 (231)
- +.....++..+.++|+|||.+++.+...
T Consensus 266 p------P~~~~~~l~~~~~~L~~gG~l~~~~~~~ 294 (336)
T 2yx1_A 266 L------PKFAHKFIDKALDIVEEGGVIHYYTIGK 294 (336)
T ss_dssp C------TTTGGGGHHHHHHHEEEEEEEEEEEEES
T ss_pred C------cHhHHHHHHHHHHHcCCCCEEEEEEeec
Confidence 2 2334578999999999999998875444
No 244
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.52 E-value=6.8e-07 Score=72.83 Aligned_cols=81 Identities=11% Similarity=-0.042 Sum_probs=53.5
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc----------------------CCCC---CCCeeEE
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS----------------------RNVN---PSSVDVV 125 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~----------------------~~~~---~~~fD~i 125 (231)
.++.+|||+| |+|.++..++.... ..+++++|+++.++. .+++ +++||+|
T Consensus 171 ~~~~~VLDlG-G~G~~~~~la~~~~----~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~V 245 (373)
T 2qm3_A 171 LENKDIFVLG-DDDLTSIALMLSGL----PKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTF 245 (373)
T ss_dssp STTCEEEEES-CTTCHHHHHHHHTC----CSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEE
T ss_pred CCCCEEEEEC-CCCHHHHHHHHhCC----CCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEE
Confidence 3578999999 99999988873210 123444454433321 0122 3589999
Q ss_pred EEeeeeeccCCCCHHHHHHHHHHhcCCCeEE-EEE
Q 045799 126 TLIFMLSAVSPKKMPLILQNIKAVLKPDGYI-LVC 159 (231)
Q Consensus 126 i~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l-~i~ 159 (231)
++...++.. ....+++++.+.|+|||.+ ++.
T Consensus 246 i~~~p~~~~---~~~~~l~~~~~~LkpgG~~~~~~ 277 (373)
T 2qm3_A 246 ITDPPETLE---AIRAFVGRGIATLKGPRCAGYFG 277 (373)
T ss_dssp EECCCSSHH---HHHHHHHHHHHTBCSTTCEEEEE
T ss_pred EECCCCchH---HHHHHHHHHHHHcccCCeEEEEE
Confidence 998665443 2588999999999999954 443
No 245
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.50 E-value=6.7e-08 Score=79.43 Aligned_cols=85 Identities=12% Similarity=0.065 Sum_probs=57.6
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC-------------------------C---CCCCCe
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR-------------------------N---VNPSSV 122 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~-------------------------~---~~~~~f 122 (231)
.++.+|||+|||+|.++..++... ..+++++|+++.++.. + ..+++|
T Consensus 216 ~~~~~VLDl~~G~G~~~~~la~~g-----~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~f 290 (396)
T 2as0_A 216 QPGDRVLDVFTYTGGFAIHAAIAG-----ADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKF 290 (396)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHTT-----CSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCE
T ss_pred hCCCeEEEecCCCCHHHHHHHHCC-----CCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCC
Confidence 367899999999999999998431 1145566655443210 0 025689
Q ss_pred eEEEEeeee---------eccCCCCHHHHHHHHHHhcCCCeEEEEEecc
Q 045799 123 DVVTLIFML---------SAVSPKKMPLILQNIKAVLKPDGYILVCDYA 162 (231)
Q Consensus 123 D~ii~~~~l---------~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~ 162 (231)
|+|++.-.. ++. .....++..+.++|+|||.+++.+.+
T Consensus 291 D~Vi~dpP~~~~~~~~~~~~~--~~~~~~l~~~~~~LkpgG~lv~~~~~ 337 (396)
T 2as0_A 291 DIVVLDPPAFVQHEKDLKAGL--RAYFNVNFAGLNLVKDGGILVTCSCS 337 (396)
T ss_dssp EEEEECCCCSCSSGGGHHHHH--HHHHHHHHHHHTTEEEEEEEEEEECC
T ss_pred CEEEECCCCCCCCHHHHHHHH--HHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 999984221 111 34677899999999999999887543
No 246
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.46 E-value=1e-06 Score=67.65 Aligned_cols=92 Identities=15% Similarity=0.097 Sum_probs=55.4
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCC--ccc---------------ccCCCCCCCeeEEEEeeeeec
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVV--NDD---------------LSRNVNPSSVDVVTLIFMLSA 133 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~--~~~---------------~~~~~~~~~fD~ii~~~~l~~ 133 (231)
.++.+|||+|||+|.++..++............+++|.. +.+ -...+++++||+|++....+
T Consensus 73 ~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~~~~~g~~ii~~~~~~dv~~l~~~~~DlVlsD~apn- 151 (277)
T 3evf_A 73 KLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMNVQSLGWNIITFKDKTDIHRLEPVKCDTLLCDIGES- 151 (277)
T ss_dssp CCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCCCCBTTGGGEEEECSCCTTTSCCCCCSEEEECCCCC-
T ss_pred CCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCcccccccCcCCCCeEEEeccceehhcCCCCccEEEecCccC-
Confidence 677899999999999998776331110000001111210 000 01245678999999976555
Q ss_pred cCC---CCHH--HHHHHHHHhcCCC-eEEEEEeccC
Q 045799 134 VSP---KKMP--LILQNIKAVLKPD-GYILVCDYAI 163 (231)
Q Consensus 134 ~~~---~~~~--~~l~~~~~~Lk~g-G~l~i~~~~~ 163 (231)
... +... .++..+.++|+|| |.|++..+.+
T Consensus 152 sG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~p 187 (277)
T 3evf_A 152 SSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLAP 187 (277)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCT
T ss_pred cCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecCC
Confidence 211 1111 3468889999999 9999987773
No 247
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.45 E-value=9e-08 Score=84.02 Aligned_cols=83 Identities=11% Similarity=0.136 Sum_probs=57.8
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC--------------------------CCCCCCeeE
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR--------------------------NVNPSSVDV 124 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~--------------------------~~~~~~fD~ 124 (231)
.++.+|||+|||+|.++..++... ..+++++|+++.++.. +...++||+
T Consensus 538 ~~g~~VLDlg~GtG~~sl~aa~~g-----a~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~ 612 (703)
T 3v97_A 538 SKGKDFLNLFSYTGSATVHAGLGG-----ARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDL 612 (703)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHTT-----CSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEE
T ss_pred cCCCcEEEeeechhHHHHHHHHCC-----CCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccE
Confidence 357899999999999999887421 1134556655544321 113468999
Q ss_pred EEEee-----------eeeccCCCCHHHHHHHHHHhcCCCeEEEEEe
Q 045799 125 VTLIF-----------MLSAVSPKKMPLILQNIKAVLKPDGYILVCD 160 (231)
Q Consensus 125 ii~~~-----------~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~ 160 (231)
|++.- ++... .+...++..+.++|+|||.++++.
T Consensus 613 Ii~DPP~f~~~~~~~~~~~~~--~~~~~ll~~a~~~LkpgG~L~~s~ 657 (703)
T 3v97_A 613 IFIDPPTFSNSKRMEDAFDVQ--RDHLALMKDLKRLLRAGGTIMFSN 657 (703)
T ss_dssp EEECCCSBC-------CCBHH--HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEECCccccCCccchhHHHHH--HHHHHHHHHHHHhcCCCcEEEEEE
Confidence 99843 22333 456788999999999999999874
No 248
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.42 E-value=4.4e-07 Score=76.16 Aligned_cols=89 Identities=11% Similarity=0.207 Sum_probs=57.8
Q ss_pred CCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC-----------------------CC-CCCCeeEEEE
Q 045799 72 NPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR-----------------------NV-NPSSVDVVTL 127 (231)
Q Consensus 72 ~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~-----------------------~~-~~~~fD~ii~ 127 (231)
++.+|||+|||+|..+..++.... ....++++|++..++.. +. .+++||+|++
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~---~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~~~~~fD~Il~ 193 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMN---NEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPEMFDAILL 193 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTT---TCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHHSTTCEEEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCC---CCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhhccccCCEEEE
Confidence 788999999999999999884211 01234555555443210 11 3468999998
Q ss_pred e------eeeeccCCC--------------CHHHHHHHHHHhcCCCeEEEEEeccC
Q 045799 128 I------FMLSAVSPK--------------KMPLILQNIKAVLKPDGYILVCDYAI 163 (231)
Q Consensus 128 ~------~~l~~~~~~--------------~~~~~l~~~~~~Lk~gG~l~i~~~~~ 163 (231)
. .++.+.|.. ....++..+.++|||||+++.++.+.
T Consensus 194 D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~ 249 (479)
T 2frx_A 194 DAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTL 249 (479)
T ss_dssp ECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred CCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccC
Confidence 3 223332210 02478999999999999999886544
No 249
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.39 E-value=9e-07 Score=73.15 Aligned_cols=88 Identities=15% Similarity=0.078 Sum_probs=57.4
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC-------------CCCCCCeeEEEEeeeeec----
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR-------------NVNPSSVDVVTLIFMLSA---- 133 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~-------------~~~~~~fD~ii~~~~l~~---- 133 (231)
.++.+|||+|||+|.++..++.... ...+++++|+++.++.. ....++||+|+++=.+..
T Consensus 38 ~~~~~vLD~gcGtG~~~~~~~~~~~---~~~~i~gvDi~~~~~~~a~~~~~~~~D~~~~~~~~~fD~Ii~NPPy~~~~~~ 114 (421)
T 2ih2_A 38 PRGGRVLEPACAHGPFLRAFREAHG---TAYRFVGVEIDPKALDLPPWAEGILADFLLWEPGEAFDLILGNPPYGIVGEA 114 (421)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHHC---SCSEEEEEESCTTTCCCCTTEEEEESCGGGCCCSSCEEEEEECCCCCCBSCT
T ss_pred CCCCEEEECCCCChHHHHHHHHHhC---CCCeEEEEECCHHHHHhCCCCcEEeCChhhcCccCCCCEEEECcCccCcccc
Confidence 3456999999999999988873210 12356677776655431 123468999999522111
Q ss_pred ------cCCC-----------------CHHHHHHHHHHhcCCCeEEEEEec
Q 045799 134 ------VSPK-----------------KMPLILQNIKAVLKPDGYILVCDY 161 (231)
Q Consensus 134 ------~~~~-----------------~~~~~l~~~~~~Lk~gG~l~i~~~ 161 (231)
++.+ -...+++.+.++|+|||.+++...
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p 165 (421)
T 2ih2_A 115 SKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVP 165 (421)
T ss_dssp TTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEC
Confidence 1100 122678999999999999988753
No 250
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.36 E-value=2.1e-08 Score=77.01 Aligned_cols=80 Identities=13% Similarity=0.077 Sum_probs=48.5
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC---------------------CCC-CCCeeEEEEe
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR---------------------NVN-PSSVDVVTLI 128 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~---------------------~~~-~~~fD~ii~~ 128 (231)
.++.+|||+|||+|.++..++... .+++++|+++.++.. +++ +++| .|+++
T Consensus 28 ~~~~~VLDiG~G~G~~~~~l~~~~------~~v~~id~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~~~~~f-~vv~n 100 (245)
T 1yub_A 28 KETDTVYEIGTGKGHLTTKLAKIS------KQVTSIELDSHLFNLSSEKLKLNTRVTLIHQDILQFQFPNKQRY-KIVGN 100 (245)
T ss_dssp CSSEEEEECSCCCSSCSHHHHHHS------SEEEESSSSCSSSSSSSCTTTTCSEEEECCSCCTTTTCCCSSEE-EEEEE
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhC------CeEEEEECCHHHHHHHHHHhccCCceEEEECChhhcCcccCCCc-EEEEe
Confidence 567899999999999999987321 234455544433211 223 2567 55553
Q ss_pred e-----------eeeccCCCCHHHHH----HHHHHhcCCCeEEEEE
Q 045799 129 F-----------MLSAVSPKKMPLIL----QNIKAVLKPDGYILVC 159 (231)
Q Consensus 129 ~-----------~l~~~~~~~~~~~l----~~~~~~Lk~gG~l~i~ 159 (231)
- ++.|. .....++ +.+.++|+|||.+.+.
T Consensus 101 ~Py~~~~~~~~~~~~~~--~~~~~~lm~q~e~a~rll~~~G~l~v~ 144 (245)
T 1yub_A 101 IPYHLSTQIIKKVVFES--RASDIYLIVEEGFYKRTLDIHRTLGLL 144 (245)
T ss_dssp CCSSSCHHHHHHHHHHC--CCEEEEEEEESSHHHHHHCGGGSHHHH
T ss_pred CCccccHHHHHHHHhCC--CCCeEEEEeeHHHHHHHhCCCCchhhh
Confidence 2 11222 2333344 6689999999998764
No 251
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.35 E-value=1.6e-07 Score=73.74 Aligned_cols=21 Identities=48% Similarity=0.662 Sum_probs=19.2
Q ss_pred CCCCeEEEEcCCCCcchHHHh
Q 045799 71 GNPKVVLEVGCGAGNTIFPLV 91 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~ 91 (231)
.++.+|||||||+|.++..++
T Consensus 27 ~~~~~VLDiG~G~G~lt~~L~ 47 (285)
T 1zq9_A 27 RPTDVVLEVGPGTGNMTVKLL 47 (285)
T ss_dssp CTTCEEEEECCTTSTTHHHHH
T ss_pred CCCCEEEEEcCcccHHHHHHH
Confidence 567899999999999999998
No 252
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.28 E-value=6.7e-06 Score=68.29 Aligned_cols=83 Identities=23% Similarity=0.277 Sum_probs=49.6
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCcc------------------c---cccceeeeeecCCcccccCCCCCCCeeEEEEee
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSE------------------F---REERVNAFVCNVVNDDLSRNVNPSSVDVVTLIF 129 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~------------------~---~~~~~~~~~~D~~~~~~~~~~~~~~fD~ii~~~ 129 (231)
.++.+|||+|||+|.++..++.... . .-.++.+...|+.......++.+++||+|++.
T Consensus 285 ~~~~~VLDlgcG~G~~~~~la~~~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~~~~~~~fD~Vv~d- 363 (433)
T 1uwv_A 285 QPEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLD- 363 (433)
T ss_dssp CTTCEEEEESCTTTTTHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTCCSEEEEC-
T ss_pred CCCCEEEECCCCCCHHHHHHHhhCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhhhhhcCCCCEEEEC-
Confidence 4668999999999999999984310 0 00123344444432111112345689999973
Q ss_pred eeeccCCCCHHHHHHHHHHhcCCCeEEEEE
Q 045799 130 MLSAVSPKKMPLILQNIKAVLKPDGYILVC 159 (231)
Q Consensus 130 ~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~ 159 (231)
-|......+++.+.+ ++|+++++++
T Consensus 364 ----PPr~g~~~~~~~l~~-~~p~~ivyvs 388 (433)
T 1uwv_A 364 ----PARAGAAGVMQQIIK-LEPIRIVYVS 388 (433)
T ss_dssp ----CCTTCCHHHHHHHHH-HCCSEEEEEE
T ss_pred ----CCCccHHHHHHHHHh-cCCCeEEEEE
Confidence 232333456665553 7899988886
No 253
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.26 E-value=2.9e-06 Score=65.24 Aligned_cols=88 Identities=14% Similarity=0.093 Sum_probs=56.3
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccc---------------------cCCCCCCCeeEEEEee
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDL---------------------SRNVNPSSVDVVTLIF 129 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~---------------------~~~~~~~~fD~ii~~~ 129 (231)
.++.+|||+|||+|.++..++.... ...+.++|+...+. ...++.+++|+|++-.
T Consensus 89 k~~~~VLDLGaAPGGWsQvAa~~~g----v~sV~GvdvG~d~~~~pi~~~~~g~~ii~~~~~~dv~~l~~~~~DvVLSDm 164 (282)
T 3gcz_A 89 KPTGIVVDLGCGRGGWSYYAASLKN----VKKVMAFTLGVQGHEKPIMRTTLGWNLIRFKDKTDVFNMEVIPGDTLLCDI 164 (282)
T ss_dssp CCCEEEEEETCTTCHHHHHHHTSTT----EEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSCCGGGSCCCCCSEEEECC
T ss_pred CCCCEEEEeCCCCCHHHHHHHHhcC----CCeeeeEEeccCccccccccccCCCceEEeeCCcchhhcCCCCcCEEEecC
Confidence 6778999999999999987763221 11223333321100 0134568999999976
Q ss_pred eeeccCC---CCHH--HHHHHHHHhcCCC--eEEEEEeccC
Q 045799 130 MLSAVSP---KKMP--LILQNIKAVLKPD--GYILVCDYAI 163 (231)
Q Consensus 130 ~l~~~~~---~~~~--~~l~~~~~~Lk~g--G~l~i~~~~~ 163 (231)
..+ ... +... .++.-+.++|+|| |.|++-.+.+
T Consensus 165 Apn-sG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~p 204 (282)
T 3gcz_A 165 GES-SPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLCP 204 (282)
T ss_dssp CCC-CSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESCC
T ss_pred ccC-CCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEecC
Confidence 655 211 1111 3577778999999 9999987773
No 254
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.18 E-value=2.1e-06 Score=67.78 Aligned_cols=55 Identities=24% Similarity=0.365 Sum_probs=37.0
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC---------------------CCCCCCeeEEEEee
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR---------------------NVNPSSVDVVTLIF 129 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~---------------------~~~~~~fD~ii~~~ 129 (231)
.++.+|||||||+|.++..++.. ..+++++|+++.++.. .++..+||+|++..
T Consensus 41 ~~~~~VLDiG~G~G~lt~~La~~------~~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~D~Vv~n~ 114 (299)
T 2h1r_A 41 KSSDIVLEIGCGTGNLTVKLLPL------AKKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKTVFPKFDVCTANI 114 (299)
T ss_dssp CTTCEEEEECCTTSTTHHHHTTT------SSEEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSSCCCCCSEEEEEC
T ss_pred CCcCEEEEEcCcCcHHHHHHHhc------CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhCCcccCCEEEEcC
Confidence 56789999999999999999843 1245666665443210 12235899999865
Q ss_pred ee
Q 045799 130 ML 131 (231)
Q Consensus 130 ~l 131 (231)
..
T Consensus 115 py 116 (299)
T 2h1r_A 115 PY 116 (299)
T ss_dssp CG
T ss_pred Cc
Confidence 43
No 255
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.16 E-value=3.7e-06 Score=69.57 Aligned_cols=78 Identities=15% Similarity=0.146 Sum_probs=50.0
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC--------------------CCCCCCeeEEEEeee
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR--------------------NVNPSSVDVVTLIFM 130 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~--------------------~~~~~~fD~ii~~~~ 130 (231)
.++.+|||+|||+|.++..++... .+++++|+++.++.. .+...+||+|++.-
T Consensus 289 ~~~~~VLDlgcG~G~~sl~la~~~------~~V~gvD~s~~ai~~A~~n~~~ngl~v~~~~~d~~~~~~~~fD~Vv~dP- 361 (425)
T 2jjq_A 289 VEGEKILDMYSGVGTFGIYLAKRG------FNVKGFDSNEFAIEMARRNVEINNVDAEFEVASDREVSVKGFDTVIVDP- 361 (425)
T ss_dssp CCSSEEEEETCTTTHHHHHHHHTT------CEEEEEESCHHHHHHHHHHHHHHTCCEEEEECCTTTCCCTTCSEEEECC-
T ss_pred CCCCEEEEeeccchHHHHHHHHcC------CEEEEEECCHHHHHHHHHHHHHcCCcEEEEECChHHcCccCCCEEEEcC-
Confidence 567899999999999999988431 244555555433211 11123799999832
Q ss_pred eeccCCCCH-HHHHHHHHHhcCCCeEEEEEe
Q 045799 131 LSAVSPKKM-PLILQNIKAVLKPDGYILVCD 160 (231)
Q Consensus 131 l~~~~~~~~-~~~l~~~~~~Lk~gG~l~i~~ 160 (231)
|.... ..+++.+. .|+|+|+++++.
T Consensus 362 ----Pr~g~~~~~~~~l~-~l~p~givyvsc 387 (425)
T 2jjq_A 362 ----PRAGLHPRLVKRLN-REKPGVIVYVSC 387 (425)
T ss_dssp ----CTTCSCHHHHHHHH-HHCCSEEEEEES
T ss_pred ----CccchHHHHHHHHH-hcCCCcEEEEEC
Confidence 22222 34566655 589999999873
No 256
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.07 E-value=1.9e-06 Score=71.81 Aligned_cols=90 Identities=14% Similarity=0.079 Sum_probs=56.9
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCcc---cc------ccceeeeeecCCcccccC------------------------CC
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSE---FR------EERVNAFVCNVVNDDLSR------------------------NV 117 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~---~~------~~~~~~~~~D~~~~~~~~------------------------~~ 117 (231)
.++.+|||.|||+|.++..++.... .. ....+++++|+.+.++.. ..
T Consensus 170 ~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~~i~~gD~l~~~ 249 (445)
T 2okc_A 170 QMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDRSPIVCEDSLEKE 249 (445)
T ss_dssp CTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSCCSEEECCTTTSC
T ss_pred CCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCCCCEeeCCCCCCc
Confidence 5567999999999999887762210 00 012345566655432210 01
Q ss_pred CCCCeeEEEEeeeeeccCCCC---------------HHHHHHHHHHhcCCCeEEEEEe
Q 045799 118 NPSSVDVVTLIFMLSAVSPKK---------------MPLILQNIKAVLKPDGYILVCD 160 (231)
Q Consensus 118 ~~~~fD~ii~~~~l~~~~~~~---------------~~~~l~~~~~~Lk~gG~l~i~~ 160 (231)
...+||+|+++-.+......+ ...+++.+.+.|+|||++++..
T Consensus 250 ~~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~ 307 (445)
T 2okc_A 250 PSTLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVL 307 (445)
T ss_dssp CSSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEE
Confidence 224899999976655432111 1378999999999999998765
No 257
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.05 E-value=1.4e-05 Score=55.35 Aligned_cols=81 Identities=15% Similarity=0.161 Sum_probs=55.7
Q ss_pred CCCCeEEEEcCCCC-cchHHHhcCccccccceeeeeecCCccccc-------CCCCC--CCeeEEEEeeeeeccCCCCHH
Q 045799 71 GNPKVVLEVGCGAG-NTIFPLVSHSEFREERVNAFVCNVVNDDLS-------RNVNP--SSVDVVTLIFMLSAVSPKKMP 140 (231)
Q Consensus 71 ~~~~~iLdvGcG~G-~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~-------~~~~~--~~fD~ii~~~~l~~~~~~~~~ 140 (231)
.++.+|||||||+| ..+..|+.+. ++.++++|+++..+. .+..+ +.||+|.+.. |+.+++
T Consensus 34 ~~~~rVlEVG~G~g~~vA~~La~~~-----g~~V~atDInp~Av~~v~dDiF~P~~~~Y~~~DLIYsir-----PP~El~ 103 (153)
T 2k4m_A 34 GPGTRVVEVGAGRFLYVSDYIRKHS-----KVDLVLTDIKPSHGGIVRDDITSPRMEIYRGAALIYSIR-----PPAEIH 103 (153)
T ss_dssp CSSSEEEEETCTTCCHHHHHHHHHS-----CCEEEEECSSCSSTTEECCCSSSCCHHHHTTEEEEEEES-----CCTTTH
T ss_pred CCCCcEEEEccCCChHHHHHHHHhC-----CCeEEEEECCccccceEEccCCCCcccccCCcCEEEEcC-----CCHHHH
Confidence 44679999999999 5998887422 456777887654321 12221 4899998865 678888
Q ss_pred HHHHHHHHhcCCCeEEEEEeccC
Q 045799 141 LILQNIKAVLKPDGYILVCDYAI 163 (231)
Q Consensus 141 ~~l~~~~~~Lk~gG~l~i~~~~~ 163 (231)
..+.++++.. |.-++|...+.
T Consensus 104 ~~i~~lA~~v--~adliI~pL~~ 124 (153)
T 2k4m_A 104 SSLMRVADAV--GARLIIKPLTG 124 (153)
T ss_dssp HHHHHHHHHH--TCEEEEECBTT
T ss_pred HHHHHHHHHc--CCCEEEEcCCC
Confidence 8888888754 45577765444
No 258
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.03 E-value=3.5e-05 Score=59.65 Aligned_cols=87 Identities=16% Similarity=0.104 Sum_probs=56.3
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccc---------------------cCCCCCCCeeEEEEee
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDL---------------------SRNVNPSSVDVVTLIF 129 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~---------------------~~~~~~~~fD~ii~~~ 129 (231)
.++.+|||+||++|.++..++.... ...+.++|+...+. ...+..+.+|+|++-.
T Consensus 80 ~~g~~vlDLGaaPGgWsqva~~~~g----v~sV~Gvdlg~~~~~~P~~~~~~~~~iv~~~~~~di~~l~~~~~DlVlsD~ 155 (300)
T 3eld_A 80 RITGRVLDLGCGRGGWSYYAAAQKE----VMSVKGYTLGIEGHEKPIHMQTLGWNIVKFKDKSNVFTMPTEPSDTLLCDI 155 (300)
T ss_dssp CCCEEEEEETCTTCHHHHHHHTSTT----EEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSCCTTTSCCCCCSEEEECC
T ss_pred CCCCEEEEcCCCCCHHHHHHHHhcC----CceeeeEEeccccccccccccccCCceEEeecCceeeecCCCCcCEEeecC
Confidence 6789999999999999988885321 11233444432110 0123567899999965
Q ss_pred eeeccCC---CCH--HHHHHHHHHhcCCC-eEEEEEecc
Q 045799 130 MLSAVSP---KKM--PLILQNIKAVLKPD-GYILVCDYA 162 (231)
Q Consensus 130 ~l~~~~~---~~~--~~~l~~~~~~Lk~g-G~l~i~~~~ 162 (231)
..+ -.. +.. ..++.-+.++|+|| |.|++-.+.
T Consensus 156 APn-sG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~ 193 (300)
T 3eld_A 156 GES-SSNPLVERDRTMKVLENFERWKHVNTENFCVKVLA 193 (300)
T ss_dssp CCC-CSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESS
T ss_pred cCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecc
Confidence 444 211 111 24477778999999 999998777
No 259
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=97.95 E-value=5.4e-06 Score=63.87 Aligned_cols=62 Identities=16% Similarity=0.148 Sum_probs=41.5
Q ss_pred CeeEEEEeee-eeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeEEEeeCHHHH
Q 045799 121 SVDVVTLIFM-LSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYFSEDFL 199 (231)
Q Consensus 121 ~fD~ii~~~~-l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 199 (231)
.||+|+.-.. -...|+--...+++.++++|+|||+++.. +. ...+
T Consensus 173 ~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~ty--sa--------------------------------a~~v 218 (257)
T 2qy6_A 173 KVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATF--TS--------------------------------AGFV 218 (257)
T ss_dssp CEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEES--CC--------------------------------BHHH
T ss_pred eEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEEE--eC--------------------------------CHHH
Confidence 7999998431 11111001357999999999999998752 11 1357
Q ss_pred HHHHHHcCceEEEEEEE
Q 045799 200 STLFLEAGFSTVDINIH 216 (231)
Q Consensus 200 ~~~l~~~Gf~~~~~~~~ 216 (231)
++.|.++||++.+....
T Consensus 219 rr~L~~aGF~v~~~~g~ 235 (257)
T 2qy6_A 219 RRGLQEAGFTMQKRKGF 235 (257)
T ss_dssp HHHHHHHTEEEEEECCS
T ss_pred HHHHHHCCCEEEeCCCC
Confidence 88889999998875443
No 260
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=97.91 E-value=2.1e-06 Score=65.71 Aligned_cols=21 Identities=29% Similarity=0.589 Sum_probs=19.2
Q ss_pred CCCCeEEEEcCCCCcchHHHh
Q 045799 71 GNPKVVLEVGCGAGNTIFPLV 91 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~ 91 (231)
.++.+|||||||+|.++..++
T Consensus 29 ~~~~~VLDiG~G~G~lt~~l~ 49 (244)
T 1qam_A 29 NEHDNIFEIGSGKGHFTLELV 49 (244)
T ss_dssp CTTCEEEEECCTTSHHHHHHH
T ss_pred CCCCEEEEEeCCchHHHHHHH
Confidence 567899999999999999988
No 261
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=97.90 E-value=7.9e-06 Score=65.60 Aligned_cols=85 Identities=21% Similarity=0.179 Sum_probs=51.8
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC---------------------------------CC
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR---------------------------------NV 117 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~---------------------------------~~ 117 (231)
+++.+||+||||+|..+..++.... . ++..+|+.+..+.. ..
T Consensus 187 p~pkrVL~IGgG~G~~arellk~~~---~--~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~ 261 (364)
T 2qfm_A 187 YTGKDVLILGGGDGGILCEIVKLKP---K--MVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRY 261 (364)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCC---S--EEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHH
T ss_pred CCCCEEEEEECChhHHHHHHHHCCC---C--EEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhh
Confidence 4678999999999999998874421 1 22333333221100 00
Q ss_pred --CCCCeeEEEEeeee-ecc-CCC--CHHHHHHHH----HHhcCCCeEEEEEe
Q 045799 118 --NPSSVDVVTLIFML-SAV-SPK--KMPLILQNI----KAVLKPDGYILVCD 160 (231)
Q Consensus 118 --~~~~fD~ii~~~~l-~~~-~~~--~~~~~l~~~----~~~Lk~gG~l~i~~ 160 (231)
.+++||+|++-..- ..- .+. ....+++.+ .++|+|||++++..
T Consensus 262 ~~~~~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs 314 (364)
T 2qfm_A 262 AKEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQG 314 (364)
T ss_dssp HHHTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred hccCCCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEc
Confidence 24689999996432 111 011 225666666 89999999998763
No 262
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=97.86 E-value=1e-05 Score=63.49 Aligned_cols=22 Identities=36% Similarity=0.456 Sum_probs=19.7
Q ss_pred CCCCeEEEEcCCCCcchHHHhc
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVS 92 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~ 92 (231)
.++.+|||||||+|.++..++.
T Consensus 49 ~~~~~VLEIG~G~G~lT~~La~ 70 (295)
T 3gru_A 49 TKDDVVLEIGLGKGILTEELAK 70 (295)
T ss_dssp CTTCEEEEECCTTSHHHHHHHH
T ss_pred CCcCEEEEECCCchHHHHHHHh
Confidence 5678999999999999999983
No 263
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=97.81 E-value=6.2e-05 Score=58.79 Aligned_cols=87 Identities=21% Similarity=0.279 Sum_probs=57.9
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCc----------------------------cccccceeeeeecCCcccccCCCCCCCe
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHS----------------------------EFREERVNAFVCNVVNDDLSRNVNPSSV 122 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~----------------------------~~~~~~~~~~~~D~~~~~~~~~~~~~~f 122 (231)
++.++||-||.|.|..++.++.+. .+...+++++..|...-. .-..++|
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l---~~~~~~y 158 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFV---NQTSQTF 158 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTT---SCSSCCE
T ss_pred CCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHH---hhccccC
Confidence 667899999999999999998332 122344555555544222 1245789
Q ss_pred eEEEEeeeeeccCCC--CHHHHHHHHHHhcCCCeEEEEEe
Q 045799 123 DVVTLIFMLSAVSPK--KMPLILQNIKAVLKPDGYILVCD 160 (231)
Q Consensus 123 D~ii~~~~l~~~~~~--~~~~~l~~~~~~Lk~gG~l~i~~ 160 (231)
|+|+.-..=..-+.. -...+++.+++.|+|||+++...
T Consensus 159 DvIi~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~ 198 (294)
T 3o4f_A 159 DVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp EEEEESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEE
T ss_pred CEEEEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEec
Confidence 999985431111111 23579999999999999998753
No 264
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=97.79 E-value=1.3e-05 Score=79.28 Aligned_cols=133 Identities=17% Similarity=0.185 Sum_probs=55.8
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCcc-ccccceeeeeecCCcccc--------------------c-CCCCCCCeeEEEEe
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSE-FREERVNAFVCNVVNDDL--------------------S-RNVNPSSVDVVTLI 128 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~-~~~~~~~~~~~D~~~~~~--------------------~-~~~~~~~fD~ii~~ 128 (231)
.+..+|||||.|+|..+..++.... ....-.++...|++...+ . .++....||+||+.
T Consensus 1239 ~~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~di~~~~~d~~~~~~~~~~~ydlvia~ 1318 (2512)
T 2vz8_A 1239 SPKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQLHVTQGQWDPANPAPGSLGKADLLVCN 1318 (2512)
T ss_dssp SSEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHHTEEEECCCSSCCCC-----CCEEEEE
T ss_pred CCCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhcccccccccccccccCCCCceeEEEEc
Confidence 4567999999999998766542111 000112445555553322 0 12234679999999
Q ss_pred eeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeEEEeeCHHHHHHHHHHcCc
Q 045799 129 FMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYFSEDFLSTLFLEAGF 208 (231)
Q Consensus 129 ~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf 208 (231)
+++|.. .+....+.+++++|||||.+++.+...... +. .. ..+.........++.+.++|.++|.++||
T Consensus 1319 ~vl~~t--~~~~~~l~~~~~lL~p~G~l~~~e~~~~~~----~g----~~-~~~~~~~~r~~~~~~~~~~w~~~l~~~gf 1387 (2512)
T 2vz8_A 1319 CALATL--GDPAVAVGNMAATLKEGGFLLLHTLLAGHP----LG----EM-VGFLTSPEQGGRHLLSQDQWESLFAGASL 1387 (2512)
T ss_dssp CC----------------------CCEEEEEEC-----------------------------------CTTTTSSTTTTE
T ss_pred cccccc--ccHHHHHHHHHHhcCCCcEEEEEecccccc----cc----cc-ccccccccccCCcccCHHHHHHHHHhCCC
Confidence 999876 678889999999999999998876432100 00 00 00100000011234677888999999999
Q ss_pred eEEEEE
Q 045799 209 STVDIN 214 (231)
Q Consensus 209 ~~~~~~ 214 (231)
..+...
T Consensus 1388 ~~~~~~ 1393 (2512)
T 2vz8_A 1388 HLVALK 1393 (2512)
T ss_dssp EEEEEE
T ss_pred ceeeec
Confidence 887653
No 265
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=97.78 E-value=7e-05 Score=58.71 Aligned_cols=64 Identities=19% Similarity=0.045 Sum_probs=45.4
Q ss_pred CCCCeeEEEEeeeeeccCCCCH----HHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeEEEe
Q 045799 118 NPSSVDVVTLIFMLSAVSPKKM----PLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTCSFY 193 (231)
Q Consensus 118 ~~~~fD~ii~~~~l~~~~~~~~----~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (231)
.+.++|+|+.-. +-|..++ ..+++.++++++|||.+.-.
T Consensus 183 ~~~~~Da~flDg---FsP~kNPeLWs~e~f~~l~~~~~pgg~laTY---------------------------------- 225 (308)
T 3vyw_A 183 ENFKADAVFHDA---FSPYKNPELWTLDFLSLIKERIDEKGYWVSY---------------------------------- 225 (308)
T ss_dssp CSCCEEEEEECC---SCTTTSGGGGSHHHHHHHHTTEEEEEEEEES----------------------------------
T ss_pred cccceeEEEeCC---CCcccCcccCCHHHHHHHHHHhCCCcEEEEE----------------------------------
Confidence 445789888754 1233444 58899999999999988542
Q ss_pred eCHHHHHHHHHHcCceEEEEEEEee
Q 045799 194 FSEDFLSTLFLEAGFSTVDINIHLK 218 (231)
Q Consensus 194 ~~~~~l~~~l~~~Gf~~~~~~~~~~ 218 (231)
-....+++.|.++||+|.+..-.++
T Consensus 226 taag~VRR~L~~aGF~V~k~~G~g~ 250 (308)
T 3vyw_A 226 SSSLSVRKSLLTLGFKVGSSREIGR 250 (308)
T ss_dssp CCCHHHHHHHHHTTCEEEEEECC--
T ss_pred eCcHHHHHHHHHCCCEEEecCCCCC
Confidence 1235789999999999998876543
No 266
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=97.67 E-value=6.5e-05 Score=57.77 Aligned_cols=22 Identities=23% Similarity=0.369 Sum_probs=19.8
Q ss_pred CCCCeEEEEcCCCCcchHHHhc
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVS 92 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~ 92 (231)
.++.+|||||||+|.++..++.
T Consensus 28 ~~~~~VLEIG~G~G~lt~~La~ 49 (255)
T 3tqs_A 28 QKTDTLVEIGPGRGALTDYLLT 49 (255)
T ss_dssp CTTCEEEEECCTTTTTHHHHTT
T ss_pred CCcCEEEEEcccccHHHHHHHH
Confidence 5678999999999999999984
No 267
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.66 E-value=8.7e-05 Score=56.27 Aligned_cols=92 Identities=13% Similarity=0.001 Sum_probs=53.4
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeec--CCccc-------c-c-------CCCCCCCeeEEEEeeeeec
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCN--VVNDD-------L-S-------RNVNPSSVDVVTLIFMLSA 133 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D--~~~~~-------~-~-------~~~~~~~fD~ii~~~~l~~ 133 (231)
.++.+|||+||++|.++...+.......-.-.++++| +.+.. + . ..+...++|+|+|-..-.
T Consensus 72 kpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~P~~~~~~Gv~~i~~~~G~Df~~~~~~~~DvVLSDMAPn- 150 (269)
T 2px2_A 72 QPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEEPMLMQSYGWNIVTMKSGVDVFYKPSEISDTLLCDIGES- 150 (269)
T ss_dssp CCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCGGGSCCCCCSEEEECCCCC-
T ss_pred CCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccccCCCcccCCCceEEEeeccCCccCCCCCCCCEEEeCCCCC-
Confidence 8899999999999999988875411111001123333 11110 0 0 012345899999955322
Q ss_pred cCCC--CH---HHHHHHHHHhcCCCe-EEEEEeccC
Q 045799 134 VSPK--KM---PLILQNIKAVLKPDG-YILVCDYAI 163 (231)
Q Consensus 134 ~~~~--~~---~~~l~~~~~~Lk~gG-~l~i~~~~~ 163 (231)
-+.. |. ..++.-+.+.|+||| .|++-.+..
T Consensus 151 SG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFqg 186 (269)
T 2px2_A 151 SPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILCP 186 (269)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCT
T ss_pred CCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECCC
Confidence 1100 11 125666779999999 898887774
No 268
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=97.58 E-value=3.4e-05 Score=63.18 Aligned_cols=92 Identities=10% Similarity=0.050 Sum_probs=57.6
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccc----------------------------------cccceeeeeecCCcccccC-
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEF----------------------------------REERVNAFVCNVVNDDLSR- 115 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~----------------------------------~~~~~~~~~~D~~~~~~~~- 115 (231)
.++..|||.+||+|.++...+....- ......++++|+++.++..
T Consensus 200 ~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~A 279 (393)
T 3k0b_A 200 HPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIA 279 (393)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHHH
Confidence 46789999999999998777621100 0112457888887766531
Q ss_pred ----------------------CCCCCCeeEEEEeeeee-cc-CCCCHHHHHHHHHHhcCC--CeEEEEEecc
Q 045799 116 ----------------------NVNPSSVDVVTLIFMLS-AV-SPKKMPLILQNIKAVLKP--DGYILVCDYA 162 (231)
Q Consensus 116 ----------------------~~~~~~fD~ii~~~~l~-~~-~~~~~~~~l~~~~~~Lk~--gG~l~i~~~~ 162 (231)
....++||+|+++=-.. .+ ..++...+++.+.+.||+ ||.+++.+..
T Consensus 280 r~Na~~~gl~~~I~~~~~D~~~~~~~~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~~ 352 (393)
T 3k0b_A 280 KQNAVEAGLGDLITFRQLQVADFQTEDEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWSVYVLTSY 352 (393)
T ss_dssp HHHHHHTTCTTCSEEEECCGGGCCCCCCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTCEEEEEECC
T ss_pred HHHHHHcCCCCceEEEECChHhCCCCCCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 11235899999973221 11 113456677777777776 8888876543
No 269
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=97.53 E-value=5.2e-05 Score=61.56 Aligned_cols=20 Identities=35% Similarity=0.551 Sum_probs=17.9
Q ss_pred CCeEEEEcCCCCcchHHHhc
Q 045799 73 PKVVLEVGCGAGNTIFPLVS 92 (231)
Q Consensus 73 ~~~iLdvGcG~G~~~~~l~~ 92 (231)
+.+|||+|||+|.++..++.
T Consensus 214 ~~~vLDl~cG~G~~~l~la~ 233 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALAR 233 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGG
T ss_pred CCEEEEccCCCCHHHHHHHh
Confidence 57899999999999998873
No 270
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=97.53 E-value=4.2e-05 Score=62.48 Aligned_cols=92 Identities=5% Similarity=0.134 Sum_probs=58.9
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCcc--------------c--------------------cccceeeeeecCCcccccC-
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSE--------------F--------------------REERVNAFVCNVVNDDLSR- 115 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~--------------~--------------------~~~~~~~~~~D~~~~~~~~- 115 (231)
.++..|||++||+|.++..++.... + ......++++|+++.++..
T Consensus 194 ~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~A 273 (385)
T 3ldu_A 194 KAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIA 273 (385)
T ss_dssp CTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHHH
Confidence 4678999999999999888762210 0 0112457788887766531
Q ss_pred ----------------------CCCCCCeeEEEEeeeee-ccC-CCCHHHHHHHHHHhcCC--CeEEEEEecc
Q 045799 116 ----------------------NVNPSSVDVVTLIFMLS-AVS-PKKMPLILQNIKAVLKP--DGYILVCDYA 162 (231)
Q Consensus 116 ----------------------~~~~~~fD~ii~~~~l~-~~~-~~~~~~~l~~~~~~Lk~--gG~l~i~~~~ 162 (231)
....++||+|+++=-.. .+. .++...+++.+.+.|++ |+.+++.+..
T Consensus 274 r~Na~~~gl~~~i~~~~~D~~~l~~~~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~~ 346 (385)
T 3ldu_A 274 RENAEIAGVDEYIEFNVGDATQFKSEDEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSYYLITSY 346 (385)
T ss_dssp HHHHHHHTCGGGEEEEECCGGGCCCSCBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCEEEEEESC
T ss_pred HHHHHHcCCCCceEEEECChhhcCcCCCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCEEEEEECC
Confidence 11236899999954322 111 13556778888888877 8888776543
No 271
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.51 E-value=0.001 Score=53.42 Aligned_cols=71 Identities=11% Similarity=0.087 Sum_probs=48.7
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccc----------------cCCCCCCCeeEEEEeeeeecc
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDL----------------SRNVNPSSVDVVTLIFMLSAV 134 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~----------------~~~~~~~~fD~ii~~~~l~~~ 134 (231)
.++.++||+||++|.++..++.. +..++++|..+... ....+.+++|+|+|-.+
T Consensus 210 ~~G~~vlDLGAaPGGWT~~l~~r------g~~V~aVD~~~l~~~l~~~~~V~~~~~d~~~~~~~~~~~D~vvsDm~---- 279 (375)
T 4auk_A 210 ANGMWAVDLGACPGGWTYQLVKR------NMWVYSVDNGPMAQSLMDTGQVTWLREDGFKFRPTRSNISWMVCDMV---- 279 (375)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT------TCEEEEECSSCCCHHHHTTTCEEEECSCTTTCCCCSSCEEEEEECCS----
T ss_pred CCCCEEEEeCcCCCHHHHHHHHC------CCEEEEEEhhhcChhhccCCCeEEEeCccccccCCCCCcCEEEEcCC----
Confidence 78999999999999999988754 34677777653221 01234568999999443
Q ss_pred CCCCHHHHHHHHHHhcCCC
Q 045799 135 SPKKMPLILQNIKAVLKPD 153 (231)
Q Consensus 135 ~~~~~~~~l~~~~~~Lk~g 153 (231)
..+..++..+.+.|..+
T Consensus 280 --~~p~~~~~l~~~wl~~~ 296 (375)
T 4auk_A 280 --EKPAKVAALMAQWLVNG 296 (375)
T ss_dssp --SCHHHHHHHHHHHHHTT
T ss_pred --CChHHhHHHHHHHHhcc
Confidence 34666666666666554
No 272
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=97.47 E-value=3.5e-05 Score=65.74 Aligned_cols=90 Identities=14% Similarity=0.098 Sum_probs=55.1
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCcc--ccc------------cceeeeeecCCccccc------------------C---
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSE--FRE------------ERVNAFVCNVVNDDLS------------------R--- 115 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~--~~~------------~~~~~~~~D~~~~~~~------------------~--- 115 (231)
.++.+|||.|||+|.++..++.... ... ....++++|+.+.++. .
T Consensus 168 ~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I~ 247 (541)
T 2ar0_A 168 QPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIR 247 (541)
T ss_dssp CTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBSEE
T ss_pred CCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCccccccCCeE
Confidence 4578999999999998877752110 000 1124555555433211 0
Q ss_pred --------CCCCCCeeEEEEeeeeeccCC------------CCHHHHHHHHHHhcCCCeEEEEEe
Q 045799 116 --------NVNPSSVDVVTLIFMLSAVSP------------KKMPLILQNIKAVLKPDGYILVCD 160 (231)
Q Consensus 116 --------~~~~~~fD~ii~~~~l~~~~~------------~~~~~~l~~~~~~Lk~gG~l~i~~ 160 (231)
.....+||+|+++=.+..... .....+++.+.+.|+|||++.+..
T Consensus 248 ~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~ 312 (541)
T 2ar0_A 248 LGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVV 312 (541)
T ss_dssp ESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEe
Confidence 012468999999654433211 112378999999999999988764
No 273
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=97.47 E-value=9.5e-05 Score=60.29 Aligned_cols=92 Identities=8% Similarity=0.041 Sum_probs=58.9
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCcc--------------c--------------------cccceeeeeecCCcccccC-
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSE--------------F--------------------REERVNAFVCNVVNDDLSR- 115 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~--------------~--------------------~~~~~~~~~~D~~~~~~~~- 115 (231)
.++..+||.+||+|.++...+.... + ......++++|++..++..
T Consensus 193 ~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~A 272 (384)
T 3ldg_A 193 FPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIA 272 (384)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHHH
Confidence 5678999999999999887762110 0 0112457788887766531
Q ss_pred ----------------------CCCCCCeeEEEEeeeee-cc-CCCCHHHHHHHHHHhcCC--CeEEEEEecc
Q 045799 116 ----------------------NVNPSSVDVVTLIFMLS-AV-SPKKMPLILQNIKAVLKP--DGYILVCDYA 162 (231)
Q Consensus 116 ----------------------~~~~~~fD~ii~~~~l~-~~-~~~~~~~~l~~~~~~Lk~--gG~l~i~~~~ 162 (231)
.....+||+|+++=-.. -+ ..++...+++.+.+.||+ ||.+++.+..
T Consensus 273 r~Na~~~gl~~~I~~~~~D~~~l~~~~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~~ 345 (384)
T 3ldg_A 273 RKNAREVGLEDVVKLKQMRLQDFKTNKINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQFILTND 345 (384)
T ss_dssp HHHHHHTTCTTTEEEEECCGGGCCCCCCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSEEEEEESC
T ss_pred HHHHHHcCCCCceEEEECChHHCCccCCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcEEEEEECC
Confidence 01235899999863321 12 124567788888888887 8888877543
No 274
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=97.44 E-value=9.6e-05 Score=60.14 Aligned_cols=80 Identities=14% Similarity=0.029 Sum_probs=49.5
Q ss_pred CCCeEEEEcCCCCcchHHHhcCcccc-------------------------------------c-cceeeeeecCCcccc
Q 045799 72 NPKVVLEVGCGAGNTIFPLVSHSEFR-------------------------------------E-ERVNAFVCNVVNDDL 113 (231)
Q Consensus 72 ~~~~iLdvGcG~G~~~~~l~~~~~~~-------------------------------------~-~~~~~~~~D~~~~~~ 113 (231)
++.+|||+|||+|..+..++....-. . .++.++..|+...+.
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~ 126 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMA 126 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHH
Confidence 46799999999999999887321100 0 012233333322111
Q ss_pred cCCCCCCCeeEEEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEe
Q 045799 114 SRNVNPSSVDVVTLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCD 160 (231)
Q Consensus 114 ~~~~~~~~fD~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~ 160 (231)
. ..++||+|++. |+-....++..+.+.|++||++++..
T Consensus 127 ~---~~~~fD~I~lD------P~~~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 127 E---RHRYFHFIDLD------PFGSPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp H---STTCEEEEEEC------CSSCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred h---ccCCCCEEEeC------CCCCHHHHHHHHHHhcCCCCEEEEEe
Confidence 0 13479998842 11234678999999999999888763
No 275
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=97.42 E-value=7.3e-05 Score=57.62 Aligned_cols=34 Identities=18% Similarity=0.168 Sum_probs=26.6
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCc
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVN 110 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~ 110 (231)
.++.+|||+|||+|..+..++.. +.+++++|+++
T Consensus 82 ~~~~~VLDlgcG~G~~a~~lA~~------g~~V~~vD~s~ 115 (258)
T 2r6z_A 82 TAHPTVWDATAGLGRDSFVLASL------GLTVTAFEQHP 115 (258)
T ss_dssp GGCCCEEETTCTTCHHHHHHHHT------TCCEEEEECCH
T ss_pred CCcCeEEEeeCccCHHHHHHHHh------CCEEEEEECCh
Confidence 45689999999999999988853 23567777776
No 276
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=97.42 E-value=0.00011 Score=63.39 Aligned_cols=80 Identities=18% Similarity=0.293 Sum_probs=48.8
Q ss_pred CCCeEEEEcCCCCcchHHHhcCcccc---------------------------ccceeeeeecCCcccccCCCCCCCeeE
Q 045799 72 NPKVVLEVGCGAGNTIFPLVSHSEFR---------------------------EERVNAFVCNVVNDDLSRNVNPSSVDV 124 (231)
Q Consensus 72 ~~~~iLdvGcG~G~~~~~l~~~~~~~---------------------------~~~~~~~~~D~~~~~~~~~~~~~~fD~ 124 (231)
....|||||||+|.++...+...... ...++++..|+..-. ..+++|+
T Consensus 357 ~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~A~~a~~~v~~N~~~dkVtVI~gd~eev~-----LPEKVDI 431 (637)
T 4gqb_A 357 NVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNAVVTLENWQFEEWGSQVTVVSSDMREWV-----APEKADI 431 (637)
T ss_dssp CEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHHHHHHHHHHHHHTTGGGEEEEESCTTTCC-----CSSCEEE
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHHHHhccCCCeEEEEeCcceecc-----CCcccCE
Confidence 44679999999998854444111111 223445555553221 2378999
Q ss_pred EEEeeeeecc-CCCCHHHHHHHHHHhcCCCeEEE
Q 045799 125 VTLIFMLSAV-SPKKMPLILQNIKAVLKPDGYIL 157 (231)
Q Consensus 125 ii~~~~l~~~-~~~~~~~~l~~~~~~Lk~gG~l~ 157 (231)
||+-.+ .++ ..+-...++....+.|||||.++
T Consensus 432 IVSEwM-G~fLl~E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 432 IVSELL-GSFADNELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp EECCCC-BTTBGGGCHHHHHHHHGGGEEEEEEEE
T ss_pred EEEEcC-cccccccCCHHHHHHHHHhcCCCcEEc
Confidence 999432 222 12445567888889999999975
No 277
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=97.41 E-value=0.0001 Score=62.85 Aligned_cols=104 Identities=10% Similarity=0.029 Sum_probs=60.6
Q ss_pred chhhhHHhhcccccCCCCCCCCCCCeEEEEcCCCCcchHHHhcCcc--c---------cccceeeeeecCCccccc----
Q 045799 50 DRHYLEKDWGNYFSDDSCCPNGNPKVVLEVGCGAGNTIFPLVSHSE--F---------REERVNAFVCNVVNDDLS---- 114 (231)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~iLdvGcG~G~~~~~l~~~~~--~---------~~~~~~~~~~D~~~~~~~---- 114 (231)
.+..+...+.+++. +...+|||.+||+|.++..++.... . ......+.++|+.+.+..
T Consensus 229 TP~~Vv~lmv~ll~-------p~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~ 301 (544)
T 3khk_A 229 TPKSIVTLIVEMLE-------PYKGRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAM 301 (544)
T ss_dssp CCHHHHHHHHHHHC-------CCSEEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHh-------cCCCeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHH
Confidence 44455555554442 2234999999999998877641100 0 001345566665543321
Q ss_pred --------------------C-CCCCCCeeEEEEeeeeec-------------------------cCCC--CHHHHHHHH
Q 045799 115 --------------------R-NVNPSSVDVVTLIFMLSA-------------------------VSPK--KMPLILQNI 146 (231)
Q Consensus 115 --------------------~-~~~~~~fD~ii~~~~l~~-------------------------~~~~--~~~~~l~~~ 146 (231)
. .+.+.+||+|+++=-+.. +++. .--.+++.+
T Consensus 302 Nl~l~gi~~~i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~ 381 (544)
T 3khk_A 302 NMVIRGIDFNFGKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHM 381 (544)
T ss_dssp HHHHTTCCCBCCSSSCCTTTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHH
T ss_pred HHHHhCCCcccceeccchhcCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHH
Confidence 0 123568999999432221 1111 112689999
Q ss_pred HHhcCCCeEEEEEe
Q 045799 147 KAVLKPDGYILVCD 160 (231)
Q Consensus 147 ~~~Lk~gG~l~i~~ 160 (231)
.+.|+|||++.+..
T Consensus 382 l~~Lk~gGr~aiVl 395 (544)
T 3khk_A 382 LYHLAPTGSMALLL 395 (544)
T ss_dssp HHTEEEEEEEEEEE
T ss_pred HHHhccCceEEEEe
Confidence 99999999987764
No 278
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=97.38 E-value=0.00014 Score=59.36 Aligned_cols=82 Identities=12% Similarity=0.030 Sum_probs=51.2
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCcccc-------------------------ccc-eeeeeecCCcccccCCCCCCCeeE
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFR-------------------------EER-VNAFVCNVVNDDLSRNVNPSSVDV 124 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~-------------------------~~~-~~~~~~D~~~~~~~~~~~~~~fD~ 124 (231)
.++.+|||++||+|.++..++.....+ ... +.++..|+..... . ...++||+
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~-~-~~~~~fD~ 128 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLR-K-EWGFGFDY 128 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHH-S-CCSSCEEE
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHH-H-hhCCCCcE
Confidence 356899999999999999887421100 001 3333333321110 0 11357999
Q ss_pred EEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEe
Q 045799 125 VTLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCD 160 (231)
Q Consensus 125 ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~ 160 (231)
|++.- . .....++..+.+.|++||++++..
T Consensus 129 V~lDP----~--g~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 129 VDLDP----F--GTPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp EEECC----S--SCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEECC----C--cCHHHHHHHHHHHhCCCCEEEEEe
Confidence 98743 1 234568999999999999888764
No 279
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=97.36 E-value=0.00012 Score=56.68 Aligned_cols=22 Identities=32% Similarity=0.303 Sum_probs=19.1
Q ss_pred CCCCeEEEEcCCCCcchHHHhcC
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSH 93 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~ 93 (231)
.++ +|||||||+|.++..++..
T Consensus 46 ~~~-~VLEIG~G~G~lt~~L~~~ 67 (271)
T 3fut_A 46 FTG-PVFEVGPGLGALTRALLEA 67 (271)
T ss_dssp CCS-CEEEECCTTSHHHHHHHHT
T ss_pred CCC-eEEEEeCchHHHHHHHHHc
Confidence 556 9999999999999999843
No 280
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=97.35 E-value=4e-05 Score=66.32 Aligned_cols=38 Identities=16% Similarity=0.277 Sum_probs=27.2
Q ss_pred CCCeeEEEEeeeeecc-CCCCHHHHHHHHHHhcCCCeEEE
Q 045799 119 PSSVDVVTLIFMLSAV-SPKKMPLILQNIKAVLKPDGYIL 157 (231)
Q Consensus 119 ~~~fD~ii~~~~l~~~-~~~~~~~~l~~~~~~Lk~gG~l~ 157 (231)
.++.|+||+-.+ .++ ..+-...+|..+.+.|||||.++
T Consensus 493 ~ekVDIIVSElm-Gsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 493 FEQPDIIVSELL-GSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp CCCCSEEEECCC-BTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred CCcccEEEEecc-ccccchhccHHHHHHHHHhCCCCcEEE
Confidence 578999999554 333 22334567888889999999875
No 281
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.31 E-value=0.0017 Score=50.26 Aligned_cols=89 Identities=11% Similarity=0.039 Sum_probs=58.3
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc---------------------CCCCCCCeeEEEEee
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS---------------------RNVNPSSVDVVTLIF 129 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~---------------------~~~~~~~fD~ii~~~ 129 (231)
.++..|||+||++|.++...+.... ...+.++|+-..... ..++..++|+|+|--
T Consensus 93 ~~~~~VlDLGaapGGwsq~~~~~~g----v~~V~avdvG~~~he~P~~~~ql~w~lV~~~~~~Dv~~l~~~~~D~ivcDi 168 (321)
T 3lkz_A 93 EPVGKVIDLGCGRGGWCYYMATQKR----VQEVRGYTKGGPGHEEPQLVQSYGWNIVTMKSGVDVFYRPSECCDTLLCDI 168 (321)
T ss_dssp CCCEEEEEETCTTCHHHHHHTTCTT----EEEEEEECCCSTTSCCCCCCCBTTGGGEEEECSCCTTSSCCCCCSEEEECC
T ss_pred CCCCEEEEeCCCCCcHHHHHHhhcC----CCEEEEEEcCCCCccCcchhhhcCCcceEEEeccCHhhCCCCCCCEEEEEC
Confidence 6778999999999999987774432 114566666554111 123447799999865
Q ss_pred eeeccCCC--CH---HHHHHHHHHhcCCC-eEEEEEeccCC
Q 045799 130 MLSAVSPK--KM---PLILQNIKAVLKPD-GYILVCDYAIG 164 (231)
Q Consensus 130 ~l~~~~~~--~~---~~~l~~~~~~Lk~g-G~l~i~~~~~~ 164 (231)
. +.-+.. +. ..+|..+.+.|+++ |-+++-.+.+.
T Consensus 169 g-eSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~pY 208 (321)
T 3lkz_A 169 G-ESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLCPY 208 (321)
T ss_dssp C-CCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTT
T ss_pred c-cCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcCCC
Confidence 5 333211 11 23677778999998 88888777773
No 282
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=97.27 E-value=0.00012 Score=57.05 Aligned_cols=22 Identities=23% Similarity=0.439 Sum_probs=19.7
Q ss_pred CCCCeEEEEcCCCCcchHHHhc
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVS 92 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~ 92 (231)
.++.+|||||||+|.++..++.
T Consensus 41 ~~~~~VLEIG~G~G~lt~~La~ 62 (279)
T 3uzu_A 41 ERGERMVEIGPGLGALTGPVIA 62 (279)
T ss_dssp CTTCEEEEECCTTSTTHHHHHH
T ss_pred CCcCEEEEEccccHHHHHHHHH
Confidence 5678999999999999999984
No 283
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=97.22 E-value=0.0014 Score=50.19 Aligned_cols=37 Identities=27% Similarity=0.380 Sum_probs=26.0
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccc
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDD 112 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~ 112 (231)
.++.+|||||||+|.++..++... ..+++++|+++.+
T Consensus 30 ~~~~~VLDiG~G~G~lt~~L~~~~-----~~~v~avEid~~~ 66 (249)
T 3ftd_A 30 EEGNTVVEVGGGTGNLTKVLLQHP-----LKKLYVIELDREM 66 (249)
T ss_dssp CTTCEEEEEESCHHHHHHHHTTSC-----CSEEEEECCCHHH
T ss_pred CCcCEEEEEcCchHHHHHHHHHcC-----CCeEEEEECCHHH
Confidence 567899999999999999998441 1244555555433
No 284
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=97.12 E-value=0.00089 Score=52.90 Aligned_cols=23 Identities=17% Similarity=0.185 Sum_probs=20.1
Q ss_pred CCCCCeEEEEcCCCCcchHHHhc
Q 045799 70 NGNPKVVLEVGCGAGNTIFPLVS 92 (231)
Q Consensus 70 ~~~~~~iLdvGcG~G~~~~~l~~ 92 (231)
..++.+|||+|||+|..+..++.
T Consensus 100 ~~~g~~VLDlcaG~G~kt~~la~ 122 (309)
T 2b9e_A 100 PPPGSHVIDACAAPGNKTSHLAA 122 (309)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHH
T ss_pred CCCCCEEEEeCCChhHHHHHHHH
Confidence 36788999999999999998873
No 285
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.09 E-value=0.0055 Score=45.94 Aligned_cols=90 Identities=14% Similarity=0.092 Sum_probs=56.1
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC---------------------CCCCCCeeEEEEee
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR---------------------NVNPSSVDVVTLIF 129 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~---------------------~~~~~~fD~ii~~~ 129 (231)
.++..|||+||++|.++...+..... ..+.++|+-....+. ..+..++|+|+|-.
T Consensus 77 ~~g~~VvDLGaapGGWSq~~a~~~g~----~~V~avdvG~~ghe~P~~~~s~gwn~v~fk~gvDv~~~~~~~~DtllcDI 152 (267)
T 3p8z_A 77 IPEGRVIDLGCGRGGWSYYCAGLKKV----TEVRGYTKGGPGHEEPVPMSTYGWNIVKLMSGKDVFYLPPEKCDTLLCDI 152 (267)
T ss_dssp CCCEEEEEESCTTSHHHHHHHTSTTE----EEEEEECCCSTTSCCCCCCCCTTTTSEEEECSCCGGGCCCCCCSEEEECC
T ss_pred CCCCEEEEcCCCCCcHHHHHHHhcCC----CEEEEEecCCCCccCcchhhhcCcCceEEEeccceeecCCccccEEEEec
Confidence 67889999999999999877744321 144555554332221 23457899999954
Q ss_pred eeeccCCC-CH---HHHHHHHHHhcCCCeEEEEEeccCCc
Q 045799 130 MLSAVSPK-KM---PLILQNIKAVLKPDGYILVCDYAIGD 165 (231)
Q Consensus 130 ~l~~~~~~-~~---~~~l~~~~~~Lk~gG~l~i~~~~~~~ 165 (231)
.=..=.+. |. ..+|.-+.+.|++ |-+++-.+.+..
T Consensus 153 geSs~~~~vE~~RtlrvLela~~wL~~-~~fc~KVl~py~ 191 (267)
T 3p8z_A 153 GESSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKVLNPYM 191 (267)
T ss_dssp CCCCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEESCCCS
T ss_pred CCCCCChhhhhhHHHHHHHHHHHhccc-CCEEEEEccCCC
Confidence 32111000 11 2366667788988 788887777766
No 286
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=97.09 E-value=0.0019 Score=54.93 Aligned_cols=89 Identities=17% Similarity=0.136 Sum_probs=52.1
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccc-------------------------cC--C-CCCCCe
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDL-------------------------SR--N-VNPSSV 122 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~-------------------------~~--~-~~~~~f 122 (231)
.++.+|||.+||+|.++..++.... ......+.+.|+..... .. + ....+|
T Consensus 220 ~~~~~VlDPaCGSG~fLi~a~~~l~-~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d~p~~~~~~f 298 (542)
T 3lkd_A 220 KQGFTLYDATMGSGSLLLNAKRYSR-QPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEPTNF 298 (542)
T ss_dssp CTTCEEEETTCTTSTTGGGHHHHCS-CTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSCSCCSSCCCB
T ss_pred CCCCEEeecccchhHHHHHHHHHHH-hccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecceecccccccccccc
Confidence 4678999999999999887752210 00122334444332211 00 1 235789
Q ss_pred eEEEEeeeee--c-----------------cCC--CCHHHHHHHHHHhcC-CCeEEEEEe
Q 045799 123 DVVTLIFMLS--A-----------------VSP--KKMPLILQNIKAVLK-PDGYILVCD 160 (231)
Q Consensus 123 D~ii~~~~l~--~-----------------~~~--~~~~~~l~~~~~~Lk-~gG~l~i~~ 160 (231)
|+|+++=-+. . +++ ..--.+++.+.+.|+ +||++.+..
T Consensus 299 D~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~Vl 358 (542)
T 3lkd_A 299 DGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVL 358 (542)
T ss_dssp SEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEE
T ss_pred cEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEe
Confidence 9999852111 0 110 011258999999999 999987754
No 287
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=97.02 E-value=0.0012 Score=58.32 Aligned_cols=89 Identities=15% Similarity=0.126 Sum_probs=55.0
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC------------------------------CCCCC
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR------------------------------NVNPS 120 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~------------------------------~~~~~ 120 (231)
.++.+|||.|||+|.++..++..... ....++.+.|+.+..+.. .....
T Consensus 320 ~~g~rVLDPaCGSG~FLIaaA~~l~e-i~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~ 398 (878)
T 3s1s_A 320 TEDEVISDPAAGSGNLLATVSAGFNN-VMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFA 398 (878)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHTSTT-CCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGT
T ss_pred CCCCEEEECCCCccHHHHHHHHHhcc-cCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccC
Confidence 45789999999999999887743210 012344566655432110 11246
Q ss_pred CeeEEEEeeeeec-cC-------------------C-------CCHHHHHHHHHHhcCCCeEEEEEe
Q 045799 121 SVDVVTLIFMLSA-VS-------------------P-------KKMPLILQNIKAVLKPDGYILVCD 160 (231)
Q Consensus 121 ~fD~ii~~~~l~~-~~-------------------~-------~~~~~~l~~~~~~Lk~gG~l~i~~ 160 (231)
+||+|+++=-+.. .. + +-...+++.+.+.|++||++.+..
T Consensus 399 kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIl 465 (878)
T 3s1s_A 399 NVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIM 465 (878)
T ss_dssp TEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred CCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEE
Confidence 8999999543311 00 0 113457889999999999998764
No 288
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=96.91 E-value=0.00081 Score=59.12 Aligned_cols=91 Identities=9% Similarity=0.037 Sum_probs=54.6
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCc----------ccc----------------------------ccceeeeeecCCccc
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHS----------EFR----------------------------EERVNAFVCNVVNDD 112 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~----------~~~----------------------------~~~~~~~~~D~~~~~ 112 (231)
.++..|||.+||+|.++...+... .|. .....++++|+++.+
T Consensus 189 ~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~a 268 (703)
T 3v97_A 189 QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARV 268 (703)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHHH
T ss_pred CCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHHH
Confidence 467899999999999988776211 000 112467788887766
Q ss_pred ccC--------------------------CCCCCCeeEEEEeeee--eccCCCCHHHHHHHHHHhc---CCCeEEEEEec
Q 045799 113 LSR--------------------------NVNPSSVDVVTLIFML--SAVSPKKMPLILQNIKAVL---KPDGYILVCDY 161 (231)
Q Consensus 113 ~~~--------------------------~~~~~~fD~ii~~~~l--~~~~~~~~~~~l~~~~~~L---k~gG~l~i~~~ 161 (231)
+.. +...++||+|+++=-. ..-..++...+++.+.+.| .|||.+++.+.
T Consensus 269 v~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk~~~~g~~~~ilt~ 348 (703)
T 3v97_A 269 IQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSA 348 (703)
T ss_dssp HHHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHHHHCTTCEEEEEES
T ss_pred HHHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence 531 1122389999996322 1111234555666555554 47999988643
No 289
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=96.79 E-value=0.0081 Score=44.23 Aligned_cols=35 Identities=14% Similarity=-0.145 Sum_probs=26.9
Q ss_pred CCCeeEEEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEe
Q 045799 119 PSSVDVVTLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCD 160 (231)
Q Consensus 119 ~~~fD~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~ 160 (231)
.++||+|+.-. ......+..+.+.|+|||++++-+
T Consensus 120 ~~~fDlIfIDg-------~k~~~~~~~~l~~l~~GG~Iv~DN 154 (202)
T 3cvo_A 120 FRHPDVVLVDG-------RFRVGCALATAFSITRPVTLLFDD 154 (202)
T ss_dssp CCCCSEEEECS-------SSHHHHHHHHHHHCSSCEEEEETT
T ss_pred CCCCCEEEEeC-------CCchhHHHHHHHhcCCCeEEEEeC
Confidence 37899999865 334567777889999999997754
No 290
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=96.72 E-value=0.0023 Score=51.65 Aligned_cols=84 Identities=21% Similarity=0.202 Sum_probs=50.9
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC-----------------------------------
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR----------------------------------- 115 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~----------------------------------- 115 (231)
.++++||=||.|.|..++.++.+.. ..+. .+|+.+..++.
T Consensus 204 ~~pkrVLIIGgGdG~~~revlkh~~---~~V~--~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~ 278 (381)
T 3c6k_A 204 YTGKDVLILGGGDGGILCEIVKLKP---KMVT--MVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRY 278 (381)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCC---SEEE--EEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHH
T ss_pred CCCCeEEEECCCcHHHHHHHHhcCC---ceeE--EEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhh
Confidence 4568999999999999999985421 2232 23322221100
Q ss_pred CCCCCCeeEEEEeeeeecc---C--CC---CHHHHHHHHHHhcCCCeEEEEE
Q 045799 116 NVNPSSVDVVTLIFMLSAV---S--PK---KMPLILQNIKAVLKPDGYILVC 159 (231)
Q Consensus 116 ~~~~~~fD~ii~~~~l~~~---~--~~---~~~~~l~~~~~~Lk~gG~l~i~ 159 (231)
.-..++||+||.-..-... | +. -.+.+++.+++.|+|||+++.-
T Consensus 279 ~~~~~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q 330 (381)
T 3c6k_A 279 AKEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQ 330 (381)
T ss_dssp HHHTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred hhccCceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEe
Confidence 0023579999985321110 0 00 1256789999999999999764
No 291
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=96.64 E-value=0.00078 Score=51.62 Aligned_cols=37 Identities=16% Similarity=0.089 Sum_probs=25.1
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccc
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDL 113 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~ 113 (231)
.++.+|||||||+|.++. +... ...+++++|+++.++
T Consensus 20 ~~~~~VLEIG~G~G~lt~-l~~~-----~~~~v~avEid~~~~ 56 (252)
T 1qyr_A 20 QKGQAMVEIGPGLAALTE-PVGE-----RLDQLTVIELDRDLA 56 (252)
T ss_dssp CTTCCEEEECCTTTTTHH-HHHT-----TCSCEEEECCCHHHH
T ss_pred CCcCEEEEECCCCcHHHH-hhhC-----CCCeEEEEECCHHHH
Confidence 567899999999999998 5421 111256666665544
No 292
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=96.42 E-value=0.001 Score=52.33 Aligned_cols=40 Identities=18% Similarity=0.312 Sum_probs=31.6
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS 114 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~ 114 (231)
.++.+|||+|||+|.++..++.... ..+++++|.++.++.
T Consensus 25 ~~g~~vLD~g~G~G~~s~~la~~~~----~~~VigvD~d~~al~ 64 (301)
T 1m6y_A 25 EDEKIILDCTVGEGGHSRAILEHCP----GCRIIGIDVDSEVLR 64 (301)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCT----TCEEEEEESCHHHHH
T ss_pred CCCCEEEEEeCCcCHHHHHHHHHCC----CCEEEEEECCHHHHH
Confidence 5678999999999999999984321 346788998887764
No 293
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=96.21 E-value=0.0038 Score=50.27 Aligned_cols=91 Identities=13% Similarity=0.130 Sum_probs=54.9
Q ss_pred CCCCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc------------------------------CCCC
Q 045799 69 PNGNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS------------------------------RNVN 118 (231)
Q Consensus 69 ~~~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~------------------------------~~~~ 118 (231)
...++.+|||+++|+|.=+.+++.... .-.++..|++..-+. ....
T Consensus 145 ~~~pg~~VLD~CAaPGGKT~~la~~~~----~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~ 220 (359)
T 4fzv_A 145 GLQPGDIVLDLCAAPGGKTLALLQTGC----CRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELE 220 (359)
T ss_dssp CCCTTEEEEESSCTTCHHHHHHHHTTC----EEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHS
T ss_pred CCCCCCEEEEecCCccHHHHHHHHhcC----CCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhc
Confidence 457889999999999999988874211 112334444321110 0123
Q ss_pred CCCeeEEEEeee--------eeccC-------CC-------CHHHHHHHHHHhcCCCeEEEEEeccC
Q 045799 119 PSSVDVVTLIFM--------LSAVS-------PK-------KMPLILQNIKAVLKPDGYILVCDYAI 163 (231)
Q Consensus 119 ~~~fD~ii~~~~--------l~~~~-------~~-------~~~~~l~~~~~~Lk~gG~l~i~~~~~ 163 (231)
.+.||.|++-.- +..-+ ++ -...+|..+.+.|||||+++-++-+.
T Consensus 221 ~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl 287 (359)
T 4fzv_A 221 GDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSL 287 (359)
T ss_dssp TTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCC
T ss_pred cccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCC
Confidence 568999997321 11000 00 11467888999999999998765444
No 294
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=96.13 E-value=0.026 Score=43.81 Aligned_cols=93 Identities=12% Similarity=0.003 Sum_probs=52.2
Q ss_pred CCCCCCCeEEEEcC------CCCcchHHHhcCccccccceeeeeecCCcccccC----------CCCCCCeeEEEEeee-
Q 045799 68 CPNGNPKVVLEVGC------GAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR----------NVNPSSVDVVTLIFM- 130 (231)
Q Consensus 68 ~~~~~~~~iLdvGc------G~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~----------~~~~~~fD~ii~~~~- 130 (231)
...+.+.+|||+|+ .+|.....-. .+.+..++.+|+.+..... ....++||+|++-..
T Consensus 105 ~~vp~gmrVLDLGA~s~kg~APGS~VLr~~-----~p~g~~VVavDL~~~~sda~~~IqGD~~~~~~~~k~DLVISDMAP 179 (344)
T 3r24_A 105 LAVPYNMRVIHFGAGSDKGVAPGTAVLRQW-----LPTGTLLVDSDLNDFVSDADSTLIGDCATVHTANKWDLIISDMYD 179 (344)
T ss_dssp CCCCTTCEEEEESCCCTTSBCHHHHHHHHH-----SCTTCEEEEEESSCCBCSSSEEEESCGGGEEESSCEEEEEECCCC
T ss_pred EeecCCCEEEeCCCCCCCCCCCcHHHHHHh-----CCCCcEEEEeeCcccccCCCeEEEccccccccCCCCCEEEecCCC
Confidence 35688999999996 5665322111 1111233444444322111 012378999999432
Q ss_pred --eeccCCCC------HHHHHHHHHHhcCCCeEEEEEeccCCc
Q 045799 131 --LSAVSPKK------MPLILQNIKAVLKPDGYILVCDYAIGD 165 (231)
Q Consensus 131 --l~~~~~~~------~~~~l~~~~~~Lk~gG~l~i~~~~~~~ 165 (231)
..+.+-+. .+.++.-+.+.|+|||.|++-.+....
T Consensus 180 NtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQGsg 222 (344)
T 3r24_A 180 PRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSW 222 (344)
T ss_dssp TTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSC
T ss_pred CcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecCCC
Confidence 12221111 456677788899999999997655443
No 295
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=96.08 E-value=0.014 Score=46.50 Aligned_cols=132 Identities=14% Similarity=0.166 Sum_probs=83.1
Q ss_pred CCCeEEEEcCCCCcchHHHhcC-c---------------------cc---------------------cccceeeeeecC
Q 045799 72 NPKVVLEVGCGAGNTIFPLVSH-S---------------------EF---------------------REERVNAFVCNV 108 (231)
Q Consensus 72 ~~~~iLdvGcG~G~~~~~l~~~-~---------------------~~---------------------~~~~~~~~~~D~ 108 (231)
+...|+.+|||.......+... . .. ...+...+.+|+
T Consensus 97 ~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~DL 176 (334)
T 1rjd_A 97 EKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDYNESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACDL 176 (334)
T ss_dssp SSEEEEEETCTTCCTHHHHHHHCTTEEEEEEECHHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECCT
T ss_pred CCcEEEEeCCCCccHHHHhcCcCCCCEEEECCCHHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecCC
Confidence 4578999999999888777610 0 00 123566778888
Q ss_pred Cccccc----CCC-CCCCeeEEEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCC---chhhh-hhhccccc-c
Q 045799 109 VNDDLS----RNV-NPSSVDVVTLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIG---DFAQV-KLLDRNQM-I 178 (231)
Q Consensus 109 ~~~~~~----~~~-~~~~fD~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~---~~~~~-~~~~~~~~-~ 178 (231)
...... ... ..+...++++-.++.++++++..++++.+.+.+ |+|.+++.+...+ +.... .+...... .
T Consensus 177 ~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v~~e~i~~~~~~~~fg~~m~~~l~~~r 255 (334)
T 1rjd_A 177 NDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWISYDPIGGSQPNDRFGAIMQSNLKESR 255 (334)
T ss_dssp TCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEECCCCSTTCCHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEEEEeccCCCCCcchHHHHHHHHhhccc
Confidence 764321 111 235679999999999999889999999999887 7888877665444 11110 00000000 0
Q ss_pred ccceEEeCCCeEEEeeCHHHHHHHHHHcCce
Q 045799 179 GDSFYVRGDGTCSFYFSEDFLSTLFLEAGFS 209 (231)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~ 209 (231)
+..+ .+ ...+.+.++..+.|.++||+
T Consensus 256 g~~l----~~-~~~y~s~~~~~~rl~~~Gf~ 281 (334)
T 1rjd_A 256 NLEM----PT-LMTYNSKEKYASRWSAAPNV 281 (334)
T ss_dssp CCCC----TT-TTTTCSHHHHHGGGTTSSEE
T ss_pred CCcc----cc-cccCCCHHHHHHHHHHCCCC
Confidence 0000 00 01246889999999999997
No 296
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=95.94 E-value=0.0075 Score=46.83 Aligned_cols=40 Identities=23% Similarity=0.252 Sum_probs=29.0
Q ss_pred CCCCeeEEEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEec
Q 045799 118 NPSSVDVVTLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDY 161 (231)
Q Consensus 118 ~~~~fD~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~ 161 (231)
+.++||+|+.-.-. . +.....+..+...|+|||++++-++
T Consensus 206 ~~~~~d~vfIDaD~--y--~~~~~~Le~~~p~L~pGGiIv~DD~ 245 (282)
T 2wk1_A 206 PIDTLAVLRMDGDL--Y--ESTWDTLTNLYPKVSVGGYVIVDDY 245 (282)
T ss_dssp CCCCEEEEEECCCS--H--HHHHHHHHHHGGGEEEEEEEEESSC
T ss_pred CCCCEEEEEEcCCc--c--ccHHHHHHHHHhhcCCCEEEEEcCC
Confidence 34678888875421 1 2345789999999999999988764
No 297
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=95.76 E-value=0.004 Score=51.02 Aligned_cols=20 Identities=20% Similarity=0.358 Sum_probs=18.2
Q ss_pred CCCeEEEEcCCCCcchHHHh
Q 045799 72 NPKVVLEVGCGAGNTIFPLV 91 (231)
Q Consensus 72 ~~~~iLdvGcG~G~~~~~l~ 91 (231)
++.+|||+|||+|..+..++
T Consensus 93 ~g~~VLDLgcG~G~~al~LA 112 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALM 112 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHH
Confidence 47899999999999998887
No 298
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=95.20 E-value=0.064 Score=41.92 Aligned_cols=97 Identities=14% Similarity=0.170 Sum_probs=53.7
Q ss_pred eeeeeecCCcccccCCCCCCCeeEEEEeeeeecc----C-C-------------CCHHHHHHHHHHhcCCCeEEEEEecc
Q 045799 101 VNAFVCNVVNDDLSRNVNPSSVDVVTLIFMLSAV----S-P-------------KKMPLILQNIKAVLKPDGYILVCDYA 162 (231)
Q Consensus 101 ~~~~~~D~~~~~~~~~~~~~~fD~ii~~~~l~~~----~-~-------------~~~~~~l~~~~~~Lk~gG~l~i~~~~ 162 (231)
+.+++.|..... ..+++++||+|++.=-.... . . ..+..+++++.++|+|||.+++....
T Consensus 22 ~~i~~gD~~~~l--~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~d 99 (297)
T 2zig_A 22 HRLHVGDAREVL--ASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVGD 99 (297)
T ss_dssp EEEEESCHHHHH--TTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred CEEEECcHHHHH--hhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEECC
Confidence 456677765422 13457889999884322110 0 0 11346788999999999999875211
Q ss_pred CCchhhhhhhccccccccceEEeCCCeEEEeeC-HHHHHHHHHHcCceEEEEEEEe
Q 045799 163 IGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYFS-EDFLSTLFLEAGFSTVDINIHL 217 (231)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~l~~~Gf~~~~~~~~~ 217 (231)
.. . .. ...+.+ ..++ ...+..+++++||......++.
T Consensus 100 ~~-~------------~~----~~~g~~-~~~~~~~~l~~~~~~~Gf~~~~~iiW~ 137 (297)
T 2zig_A 100 VA-V------------AR----RRFGRH-LVFPLHADIQVRCRKLGFDNLNPIIWH 137 (297)
T ss_dssp EE-E------------EC----C----E-EEECHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred Cc-c------------cc----ccCCcc-cccccHHHHHHHHHHcCCeeeccEEEe
Confidence 00 0 00 000001 1122 3567888999999887765544
No 299
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=94.70 E-value=0.052 Score=46.11 Aligned_cols=36 Identities=14% Similarity=0.183 Sum_probs=24.8
Q ss_pred chhhhHHhhcccccCCCCCCCCCCCeEEEEcCCCCcchHHHh
Q 045799 50 DRHYLEKDWGNYFSDDSCCPNGNPKVVLEVGCGAGNTIFPLV 91 (231)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~iLdvGcG~G~~~~~l~ 91 (231)
.+..+.+.+.+++. ..++.+|+|-+||+|.+.....
T Consensus 201 TP~~Vv~lmv~l~~------p~~~~~I~DPacGsGgfL~~a~ 236 (530)
T 3ufb_A 201 TPRPVVRFMVEVMD------PQLGESVLDPACGTGGFLVEAF 236 (530)
T ss_dssp CCHHHHHHHHHHHC------CCTTCCEEETTCTTTHHHHHHH
T ss_pred CcHHHHHHHHHhhc------cCCCCEEEeCCCCcchHHHHHH
Confidence 34445555544442 3567799999999999987664
No 300
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=94.34 E-value=0.016 Score=45.31 Aligned_cols=37 Identities=22% Similarity=0.152 Sum_probs=29.5
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccc
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDL 113 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~ 113 (231)
.++..|||++||+|.++..++.. +.+++++|+++.++
T Consensus 234 ~~~~~vlD~f~GsGt~~~~a~~~------g~~~~g~e~~~~~~ 270 (297)
T 2zig_A 234 FVGDVVLDPFAGTGTTLIAAARW------GRRALGVELVPRYA 270 (297)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHT------TCEEEEEESCHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHc------CCeEEEEeCCHHHH
Confidence 57889999999999999887754 34778999886543
No 301
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=94.02 E-value=0.018 Score=44.13 Aligned_cols=18 Identities=28% Similarity=0.458 Sum_probs=17.2
Q ss_pred CeEEEEcCCCCcchHHHh
Q 045799 74 KVVLEVGCGAGNTIFPLV 91 (231)
Q Consensus 74 ~~iLdvGcG~G~~~~~l~ 91 (231)
.+|||+|||+|..+..++
T Consensus 90 ~~VLDl~~G~G~dal~lA 107 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLA 107 (258)
T ss_dssp CCEEETTCTTCHHHHHHH
T ss_pred CEEEEcCCcCCHHHHHHH
Confidence 899999999999999888
No 302
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=93.96 E-value=0.15 Score=40.08 Aligned_cols=134 Identities=10% Similarity=0.035 Sum_probs=78.5
Q ss_pred CeEEEEcCCCCcchHHHhcC------------------------ccccccceeeeeecCCcccccC-----CCCCCCeeE
Q 045799 74 KVVLEVGCGAGNTIFPLVSH------------------------SEFREERVNAFVCNVVNDDLSR-----NVNPSSVDV 124 (231)
Q Consensus 74 ~~iLdvGcG~G~~~~~l~~~------------------------~~~~~~~~~~~~~D~~~~~~~~-----~~~~~~fD~ 124 (231)
..|+++|||--.....+... ......+...+.+|+.. .+.. .+....--+
T Consensus 104 ~QvV~LGaGlDTra~Rl~~~~~~~v~evD~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d-~~~~~l~~~g~d~~~Pt~ 182 (310)
T 2uyo_A 104 RQFVILASGLDSRAYRLDWPTGTTVYEIDQPKVLAYKSTTLAEHGVTPTADRREVPIDLRQ-DWPPALRSAGFDPSARTA 182 (310)
T ss_dssp CEEEEETCTTCCHHHHSCCCTTCEEEEEECHHHHHHHHHHHHHTTCCCSSEEEEEECCTTS-CHHHHHHHTTCCTTSCEE
T ss_pred CeEEEeCCCCCchhhhccCCCCcEEEEcCCHHHHHHHHHHHHhcCCCCCCCeEEEecchHh-hHHHHHHhccCCCCCCEE
Confidence 57999999976655444310 00123345667778765 3211 233345678
Q ss_pred EEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccc-cceEEeC-----C-CeEEEeeC-H
Q 045799 125 VTLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIG-DSFYVRG-----D-GTCSFYFS-E 196 (231)
Q Consensus 125 ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-----~-~~~~~~~~-~ 196 (231)
+++-.+++|+++++...+++.+.+.+.||+.+++....... ...... ..... ..+...+ . .....+.+ .
T Consensus 183 ~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d~~~~~~-~~~~~~--~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~ 259 (310)
T 2uyo_A 183 WLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVETSPLHG-DEWREQ--MQLRFRRVSDALGFEQAVDVQELIYHDENR 259 (310)
T ss_dssp EEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEECCCTTC-SHHHHH--HHHHHHHHHC-----------CCTTCCTTC
T ss_pred EEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEEecCCCC-cchhHH--HHHHHHHHHHHcCCcCCCCccccccCCCCh
Confidence 88889999999888899999999999899888776544332 100000 00000 0110011 0 00011225 6
Q ss_pred HHHHHHHHHcCceEE
Q 045799 197 DFLSTLFLEAGFSTV 211 (231)
Q Consensus 197 ~~l~~~l~~~Gf~~~ 211 (231)
+++.+.|.+.||+.+
T Consensus 260 ~~~~~~f~~~G~~~~ 274 (310)
T 2uyo_A 260 AVVADWLNRHGWRAT 274 (310)
T ss_dssp CCHHHHHTTTTEEEE
T ss_pred HHHHHHHHHCcCccc
Confidence 789999999999988
No 303
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=93.58 E-value=0.29 Score=38.71 Aligned_cols=96 Identities=14% Similarity=0.069 Sum_probs=55.2
Q ss_pred ccceeeeeecCCcccccCCCCCCCeeEEEEeeeeecc-----CC-------CCHHHHHHHHHHhcCCCeEEEEEeccCCc
Q 045799 98 EERVNAFVCNVVNDDLSRNVNPSSVDVVTLIFMLSAV-----SP-------KKMPLILQNIKAVLKPDGYILVCDYAIGD 165 (231)
Q Consensus 98 ~~~~~~~~~D~~~~~~~~~~~~~~fD~ii~~~~l~~~-----~~-------~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~ 165 (231)
.....++..|.....- .+++++||+|++.=-.... .. .....++.+++++|+|||.+++..-....
T Consensus 12 ~~~~~ii~gD~~~~l~--~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d~~~ 89 (323)
T 1boo_A 12 TSNGSMYIGDSLELLE--SFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGGAYM 89 (323)
T ss_dssp CSSEEEEESCHHHHGG--GSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCEE
T ss_pred cCCceEEeCcHHHHHh--hCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECCEec
Confidence 3445666777653221 3457789999884221100 00 13678899999999999999886211100
Q ss_pred hhhhhhhccccccccceEEeCCCe-EEEeeCHHHHHHHHHHcCceEEEEEEE
Q 045799 166 FAQVKLLDRNQMIGDSFYVRGDGT-CSFYFSEDFLSTLFLEAGFSTVDINIH 216 (231)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~Gf~~~~~~~~ 216 (231)
.+. ....+....+.++++.+||......++
T Consensus 90 ---------------------~g~~~~~~~~~~~i~~~~~~~Gf~~~~~iiW 120 (323)
T 1boo_A 90 ---------------------KGVPARSIYNFRVLIRMIDEVGFFLAEDFYW 120 (323)
T ss_dssp ---------------------TTEEEECCHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred ---------------------CCCcccccchHHHHHHHHHhCCCEEEEEEEE
Confidence 000 001123445667788999988765554
No 304
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=92.63 E-value=0.32 Score=38.67 Aligned_cols=110 Identities=10% Similarity=0.057 Sum_probs=66.9
Q ss_pred cceeeeeecCCccc-cc-----CCCCCCCeeEEEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhh-
Q 045799 99 ERVNAFVCNVVNDD-LS-----RNVNPSSVDVVTLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKL- 171 (231)
Q Consensus 99 ~~~~~~~~D~~~~~-~~-----~~~~~~~fD~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~- 171 (231)
.+...+.+|+.... +. ..+..+.--++++-.++.|+++++..++++.+.+.. |+|.+++.+...++......
T Consensus 163 ~~y~~v~~DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~YL~~~~~~~ll~~ia~~f-~~~~~i~yE~i~p~d~fg~~M 241 (334)
T 3iei_A 163 KRYAVIGADLRDLSELEEKLKKCNMNTQLPTLLIAECVLVYMTPEQSANLLKWAANSF-ERAMFINYEQVNMGDRFGQIM 241 (334)
T ss_dssp SSEEEEECCTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEECCTTSHHHHHH
T ss_pred CceEEEccccccchhHHHHHHhcCCCCCCCEEEEEchhhhCCCHHHHHHHHHHHHHhC-CCceEEEEeccCCCCHHHHHH
Confidence 34566777776421 11 124445678899999999999889999999999877 55666666655443322111
Q ss_pred hccccccccceEEeCCCeEEEeeCHHHHHHHHHHcCceEEEEE
Q 045799 172 LDRNQMIGDSFYVRGDGTCSFYFSEDFLSTLFLEAGFSTVDIN 214 (231)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~ 214 (231)
.......+..+ .....|.+.++..+.|.++||+.+...
T Consensus 242 ~~~l~~~g~pl-----~sl~~y~t~~~~~~r~~~~Gw~~~~~~ 279 (334)
T 3iei_A 242 IENLRRRQCDL-----AGVETCKSLESQKERLLSNGWETASAV 279 (334)
T ss_dssp HHHHHTTTCCC-----TTGGGGGCHHHHHHHHHTTTCSEEEEE
T ss_pred HHHHHHhCCCC-----cccccCCCHHHHHHHHHHcCCCcceee
Confidence 00000011000 000125688899999999999987643
No 305
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=92.26 E-value=0.41 Score=41.86 Aligned_cols=61 Identities=18% Similarity=0.201 Sum_probs=38.5
Q ss_pred CCeeEEEEeeeeeccC-CCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeEEEeeCHHH
Q 045799 120 SSVDVVTLIFMLSAVS-PKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYFSEDF 198 (231)
Q Consensus 120 ~~fD~ii~~~~l~~~~-~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (231)
..||+|+.-..-.... .--...+++.++++++|||.+... -....
T Consensus 178 ~~~d~~~~D~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~----------------------------------~~~~~ 223 (676)
T 3ps9_A 178 QKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATF----------------------------------TSAGF 223 (676)
T ss_dssp TCEEEEEECCSCGGGCGGGSCHHHHHHHHHHEEEEEEEEES----------------------------------CCCHH
T ss_pred CcccEEEECCCCCcCChhhhhHHHHHHHHHHhCCCCEEEec----------------------------------cCcHH
Confidence 4677776644211111 111356788888888888876432 12247
Q ss_pred HHHHHHHcCceEEEEE
Q 045799 199 LSTLFLEAGFSTVDIN 214 (231)
Q Consensus 199 l~~~l~~~Gf~~~~~~ 214 (231)
+++.|.++||.+....
T Consensus 224 vr~~L~~aGf~v~~~~ 239 (676)
T 3ps9_A 224 VRRGLQDAGFTMQKRK 239 (676)
T ss_dssp HHHHHHHHTCEEEEEE
T ss_pred HHHHHHhCCeEEEecc
Confidence 8889999999988765
No 306
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=92.24 E-value=0.72 Score=40.39 Aligned_cols=63 Identities=16% Similarity=0.175 Sum_probs=39.6
Q ss_pred CCCeeEEEEeeeeecc-CCCCHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeEEEeeCHH
Q 045799 119 PSSVDVVTLIFMLSAV-SPKKMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYFSED 197 (231)
Q Consensus 119 ~~~fD~ii~~~~l~~~-~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (231)
+..+|+++.-..-... |.--...++..+.+++++||.+... -...
T Consensus 169 ~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~----------------------------------~~~~ 214 (689)
T 3pvc_A 169 NNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFSTF----------------------------------TAAG 214 (689)
T ss_dssp TTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEEEEEES----------------------------------CCCH
T ss_pred CCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCCEEEec----------------------------------cCcH
Confidence 3567777764421111 1112367788888888888876432 1235
Q ss_pred HHHHHHHHcCceEEEEEE
Q 045799 198 FLSTLFLEAGFSTVDINI 215 (231)
Q Consensus 198 ~l~~~l~~~Gf~~~~~~~ 215 (231)
.+++.|.++||.+.....
T Consensus 215 ~vr~~l~~aGf~~~~~~~ 232 (689)
T 3pvc_A 215 FVRRGLQQAGFNVTKVKG 232 (689)
T ss_dssp HHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHhCCeEEEeccC
Confidence 788999999999888653
No 307
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=92.11 E-value=0.075 Score=41.07 Aligned_cols=37 Identities=5% Similarity=0.008 Sum_probs=31.3
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccc
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDL 113 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~ 113 (231)
.++..+||++||.|..+..++.. +..++++|..+..+
T Consensus 21 ~~gg~~VD~T~G~GGHS~~il~~------~g~VigiD~Dp~Ai 57 (285)
T 1wg8_A 21 RPGGVYVDATLGGAGHARGILER------GGRVIGLDQDPEAV 57 (285)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHT------TCEEEEEESCHHHH
T ss_pred CCCCEEEEeCCCCcHHHHHHHHC------CCEEEEEeCCHHHH
Confidence 67889999999999999999865 33778999987775
No 308
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=89.63 E-value=0.26 Score=33.54 Aligned_cols=43 Identities=14% Similarity=0.203 Sum_probs=31.9
Q ss_pred CCCCCCeeEEEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEE
Q 045799 116 NVNPSSVDVVTLIFMLSAVSPKKMPLILQNIKAVLKPDGYILV 158 (231)
Q Consensus 116 ~~~~~~fD~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i 158 (231)
.++.+.||.|+...--..-...-+..+++.+.+.|||||.|..
T Consensus 54 sLp~stYD~V~~lt~~~~~~~~l~r~li~~l~~aLkpgG~L~g 96 (136)
T 2km1_A 54 TLENAKYETVHYLTPEAQTDIKFPKKLISVLADSLKPNGSLIG 96 (136)
T ss_dssp CCCSSSCCSEEEECCCSSCSCCCCHHHHHHHHTTCCTTCCEEC
T ss_pred cCCcccccEEEEecCCccchhhcCHHHHHHHHHHhCCCCEEEe
Confidence 4678999999986633310013348899999999999999975
No 309
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=87.06 E-value=0.39 Score=38.43 Aligned_cols=20 Identities=20% Similarity=0.104 Sum_probs=18.4
Q ss_pred CCCeEEEEcCCCCcchHHHh
Q 045799 72 NPKVVLEVGCGAGNTIFPLV 91 (231)
Q Consensus 72 ~~~~iLdvGcG~G~~~~~l~ 91 (231)
++..|||||.|.|.++..|+
T Consensus 58 ~~~~VlEIGPG~G~LT~~Ll 77 (353)
T 1i4w_A 58 EELKVLDLYPGVGIQSAIFY 77 (353)
T ss_dssp TTCEEEEESCTTCHHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHH
Confidence 46889999999999999998
No 310
>3mag_A VP39; methylated adenine, methyltransferase, RNA CAP analog, poly (A) polymerase, mRNA processing, transcription; HET: SAH 3MA; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1bky_A* 1jsz_A* 1v39_A* 1p39_A* 1vp9_A* 2vp3_A* 1eam_A* 1jte_A* 1jtf_A* 4dcg_A* 3mct_A* 1b42_A* 1eqa_A* 1av6_A* 3er9_A* 2gaf_A 3er8_A 2ga9_A* 3erc_A*
Probab=86.63 E-value=2.1 Score=33.07 Aligned_cols=83 Identities=22% Similarity=0.201 Sum_probs=52.1
Q ss_pred CCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccCCCCCCCeeEEEEeeeeeccCCCCHHHHHHHHHHhcC
Q 045799 72 NPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSRNVNPSSVDVVTLIFMLSAVSPKKMPLILQNIKAVLK 151 (231)
Q Consensus 72 ~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~fD~ii~~~~l~~~~~~~~~~~l~~~~~~Lk 151 (231)
.+..|+=+|||.|.+...|+....--...++.+.+|..+.... . .+.-++.+.... ++ +.-+.+.++.+.
T Consensus 60 ~~~~VVYVGSApG~HL~~L~~~fp~~f~~ikWvLiDPap~~~~--l-~~~~NV~li~~f---vd----e~dl~~l~~~~~ 129 (307)
T 3mag_A 60 DGATVVYIGSAPGTHIRYLRDHFYNLGVIIKWMLIDGRHHDPI--L-NGLRDVTLVTRF---VD----EEYLRSIKKQLH 129 (307)
T ss_dssp TTCEEEEESCCSCHHHHHHHHHHHHTTCCCEEEEEESSCCCGG--G-TTCTTEEEEECC---CC----HHHHHHHHHHHT
T ss_pred CCcEEEEecccCccHHHHHHHhchhhCCCeEEEEEcCCcchhh--h-cCCCcEEEEecc---CC----HHHHHHHHHhcc
Confidence 3569999999999999988843222124678899999543321 1 112344333332 21 223566777777
Q ss_pred CCeEEEEEeccCC
Q 045799 152 PDGYILVCDYAIG 164 (231)
Q Consensus 152 ~gG~l~i~~~~~~ 164 (231)
...+++|+|....
T Consensus 130 ~~~iLLISDIRS~ 142 (307)
T 3mag_A 130 PSKIILISDVRSK 142 (307)
T ss_dssp TSCEEEEECCCC-
T ss_pred CCCEEEEEEecCC
Confidence 8899999987664
No 311
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=84.74 E-value=0.59 Score=35.59 Aligned_cols=36 Identities=19% Similarity=0.231 Sum_probs=28.3
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccc
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDD 112 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~ 112 (231)
.++..|||..||+|..+...+.. +-+++++|+.+..
T Consensus 211 ~~~~~vlD~f~GsGtt~~~a~~~------gr~~ig~e~~~~~ 246 (260)
T 1g60_A 211 NPNDLVLDCFMGSGTTAIVAKKL------GRNFIGCDMNAEY 246 (260)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHT------TCEEEEEESCHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHc------CCeEEEEeCCHHH
Confidence 67889999999999998877654 3477888887543
No 312
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=81.85 E-value=1 Score=36.01 Aligned_cols=79 Identities=18% Similarity=0.138 Sum_probs=45.2
Q ss_pred CCCCCeEEEEcCCC-CcchHHHhcCccccccceeeeeecCCccccc-------------------C---CCCCCCeeEEE
Q 045799 70 NGNPKVVLEVGCGA-GNTIFPLVSHSEFREERVNAFVCNVVNDDLS-------------------R---NVNPSSVDVVT 126 (231)
Q Consensus 70 ~~~~~~iLdvGcG~-G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~-------------------~---~~~~~~fD~ii 126 (231)
..++.+||-+|+|. |..+..++...... .++.+|.++...+ . ...++.+|+|+
T Consensus 188 ~~~g~~VlV~GaG~vG~~a~qlak~~Ga~----~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~~~gg~D~vi 263 (371)
T 1f8f_A 188 VTPASSFVTWGAGAVGLSALLAAKVCGAS----IIIAVDIVESRLELAKQLGATHVINSKTQDPVAAIKEITDGGVNFAL 263 (371)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHHTCS----EEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTSCEEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCC----eEEEECCCHHHHHHHHHcCCCEEecCCccCHHHHHHHhcCCCCcEEE
Confidence 46789999999875 66666665321100 1233332221110 0 01123688887
Q ss_pred EeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEe
Q 045799 127 LIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCD 160 (231)
Q Consensus 127 ~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~ 160 (231)
.... ....+..+.++|+++|.+++.-
T Consensus 264 d~~g--------~~~~~~~~~~~l~~~G~iv~~G 289 (371)
T 1f8f_A 264 ESTG--------SPEILKQGVDALGILGKIAVVG 289 (371)
T ss_dssp ECSC--------CHHHHHHHHHTEEEEEEEEECC
T ss_pred ECCC--------CHHHHHHHHHHHhcCCEEEEeC
Confidence 6432 1346788899999999998753
No 313
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=77.57 E-value=1.3 Score=34.80 Aligned_cols=54 Identities=19% Similarity=0.262 Sum_probs=32.6
Q ss_pred eee-eecCCcccccCCCCCCCeeEEEEeeee--e---------ccCCCCHHHHHHHHHHhcCCCeEEEEE
Q 045799 102 NAF-VCNVVNDDLSRNVNPSSVDVVTLIFML--S---------AVSPKKMPLILQNIKAVLKPDGYILVC 159 (231)
Q Consensus 102 ~~~-~~D~~~~~~~~~~~~~~fD~ii~~~~l--~---------~~~~~~~~~~l~~~~~~Lk~gG~l~i~ 159 (231)
.++ ..|.....- .++++++|+|+..=-. . ++ +.....+.++.++|+|||.+++.
T Consensus 40 ~l~i~gD~l~~L~--~l~~~svDlI~tDPPY~~~~d~~~~~~~~~--~~~~~~l~~~~rvLk~~G~i~i~ 105 (319)
T 1eg2_A 40 HVYDVCDCLDTLA--KLPDDSVQLIICDPPYNIMLADWDDHMDYI--GWAKRWLAEAERVLSPTGSIAIF 105 (319)
T ss_dssp EEEEECCHHHHHH--TSCTTCEEEEEECCCSBCCGGGGGTCSSHH--HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEECCcHHHHHH--hCccCCcCEEEECCCCCCCCCCccCHHHHH--HHHHHHHHHHHHHcCCCeEEEEE
Confidence 344 555543221 2345678877772211 0 11 13467788899999999999886
No 314
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=73.08 E-value=2.5 Score=33.53 Aligned_cols=42 Identities=10% Similarity=0.066 Sum_probs=32.0
Q ss_pred CCCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccccc
Q 045799 70 NGNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS 114 (231)
Q Consensus 70 ~~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~ 114 (231)
..++..++|..||.|..+..++.... ....++++|..+..+.
T Consensus 55 i~pggiyVD~TlG~GGHS~~iL~~lg---~~GrVig~D~Dp~Al~ 96 (347)
T 3tka_A 55 IRPDGIYIDGTFGRGGHSRLILSQLG---EEGRLLAIDRDPQAIA 96 (347)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHTTCC---TTCEEEEEESCHHHHH
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHhCC---CCCEEEEEECCHHHHH
Confidence 46789999999999999999985421 1336788888876654
No 315
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=72.56 E-value=4.7 Score=32.20 Aligned_cols=34 Identities=21% Similarity=0.283 Sum_probs=24.9
Q ss_pred CCCeeEEEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEe
Q 045799 119 PSSVDVVTLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCD 160 (231)
Q Consensus 119 ~~~fD~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~ 160 (231)
.+.+|+|+.... -...+..+.++|+++|.+++.-
T Consensus 251 ~gg~Dvvid~~G--------~~~~~~~~~~~l~~~G~vv~~G 284 (370)
T 4ej6_A 251 PGGVDVVIECAG--------VAETVKQSTRLAKAGGTVVILG 284 (370)
T ss_dssp TTCEEEEEECSC--------CHHHHHHHHHHEEEEEEEEECS
T ss_pred CCCCCEEEECCC--------CHHHHHHHHHHhccCCEEEEEe
Confidence 347999887431 1346788899999999998753
No 316
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=72.49 E-value=2.3 Score=34.41 Aligned_cols=38 Identities=16% Similarity=0.129 Sum_probs=26.4
Q ss_pred CCeeEEEEeeeee---------ccCCCCHHHHHHHHHHhcCCCeEEEEE
Q 045799 120 SSVDVVTLIFMLS---------AVSPKKMPLILQNIKAVLKPDGYILVC 159 (231)
Q Consensus 120 ~~fD~ii~~~~l~---------~~~~~~~~~~l~~~~~~Lk~gG~l~i~ 159 (231)
..+|+|+....-. |. .++...++.+.++|+++|.+++.
T Consensus 253 ~g~Dvvid~~G~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~G~iv~~ 299 (398)
T 1kol_A 253 PEVDCAVDAVGFEARGHGHEGAKH--EAPATVLNSLMQVTRVAGKIGIP 299 (398)
T ss_dssp SCEEEEEECCCTTCBCSSTTGGGS--BCTTHHHHHHHHHEEEEEEEEEC
T ss_pred CCCCEEEECCCCcccccccccccc--cchHHHHHHHHHHHhcCCEEEEe
Confidence 4689998755321 11 22345788899999999999765
No 317
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=71.85 E-value=5.9 Score=29.93 Aligned_cols=21 Identities=14% Similarity=0.227 Sum_probs=18.0
Q ss_pred HHHHHHHHHHhcCCCeEEEEE
Q 045799 139 MPLILQNIKAVLKPDGYILVC 159 (231)
Q Consensus 139 ~~~~l~~~~~~Lk~gG~l~i~ 159 (231)
...++.+++++|+|+|.+++.
T Consensus 53 ~~~~l~~~~~~Lk~~g~i~v~ 73 (260)
T 1g60_A 53 TYRWIDKVLDKLDKDGSLYIF 73 (260)
T ss_dssp HHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHHHHhcCCeEEEEE
Confidence 456788899999999999885
No 318
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=71.65 E-value=1.8 Score=31.01 Aligned_cols=31 Identities=26% Similarity=0.243 Sum_probs=23.3
Q ss_pred CCeeEEEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEE
Q 045799 120 SSVDVVTLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVC 159 (231)
Q Consensus 120 ~~fD~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~ 159 (231)
+.+|+++.... ...++.+.+.|+++|.++..
T Consensus 106 ~~~D~vi~~~g---------~~~~~~~~~~l~~~G~~v~~ 136 (198)
T 1pqw_A 106 YGVDVVLNSLA---------GEAIQRGVQILAPGGRFIEL 136 (198)
T ss_dssp CCEEEEEECCC---------THHHHHHHHTEEEEEEEEEC
T ss_pred CCCeEEEECCc---------hHHHHHHHHHhccCCEEEEE
Confidence 46898886432 13678889999999998875
No 319
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=71.30 E-value=3.8 Score=32.27 Aligned_cols=77 Identities=18% Similarity=0.167 Sum_probs=43.0
Q ss_pred CCCCCeEEEEcCC--CCcchHHHhcCccccccceeeeeecCCcccccC-----------------------CCCCCCeeE
Q 045799 70 NGNPKVVLEVGCG--AGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR-----------------------NVNPSSVDV 124 (231)
Q Consensus 70 ~~~~~~iLdvGcG--~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~-----------------------~~~~~~fD~ 124 (231)
..++.+||-+|+| .|..+..++... +.+++.++.+....+. ......+|+
T Consensus 142 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~-----Ga~Vi~~~~~~~~~~~~~~lga~~~~~~~~~~~~~~~~~~~~~~g~Dv 216 (340)
T 3gms_A 142 LQRNDVLLVNACGSAIGHLFAQLSQIL-----NFRLIAVTRNNKHTEELLRLGAAYVIDTSTAPLYETVMELTNGIGADA 216 (340)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHH-----TCEEEEEESSSTTHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEE
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHHc-----CCEEEEEeCCHHHHHHHHhCCCcEEEeCCcccHHHHHHHHhCCCCCcE
Confidence 4778999999987 455555555221 2233444433221110 012247898
Q ss_pred EEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEe
Q 045799 125 VTLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCD 160 (231)
Q Consensus 125 ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~ 160 (231)
|+....- . .+....++|+++|.+++.-
T Consensus 217 vid~~g~--------~-~~~~~~~~l~~~G~iv~~G 243 (340)
T 3gms_A 217 AIDSIGG--------P-DGNELAFSLRPNGHFLTIG 243 (340)
T ss_dssp EEESSCH--------H-HHHHHHHTEEEEEEEEECC
T ss_pred EEECCCC--------h-hHHHHHHHhcCCCEEEEEe
Confidence 8774321 1 2233458999999998763
No 320
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=71.20 E-value=3.3 Score=32.77 Aligned_cols=79 Identities=15% Similarity=0.064 Sum_probs=45.6
Q ss_pred CCCCCeEEEEcCCC-CcchHHHhcCccccccceeeeeecCCccccc-------------------C----CCCCCCeeEE
Q 045799 70 NGNPKVVLEVGCGA-GNTIFPLVSHSEFREERVNAFVCNVVNDDLS-------------------R----NVNPSSVDVV 125 (231)
Q Consensus 70 ~~~~~~iLdvGcG~-G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~-------------------~----~~~~~~fD~i 125 (231)
..++.+||-+|+|. |..+..++...... .++.+|.++...+ . ......+|+|
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~----~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~g~D~v 239 (352)
T 3fpc_A 164 IKLGDTVCVIGIGPVGLMSVAGANHLGAG----RIFAVGSRKHCCDIALEYGATDIINYKNGDIVEQILKATDGKGVDKV 239 (352)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHTTTCS----SEEEECCCHHHHHHHHHHTCCEEECGGGSCHHHHHHHHTTTCCEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCc----EEEEECCCHHHHHHHHHhCCceEEcCCCcCHHHHHHHHcCCCCCCEE
Confidence 46788999999864 55555555332110 2334443322110 0 0122468988
Q ss_pred EEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEe
Q 045799 126 TLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCD 160 (231)
Q Consensus 126 i~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~ 160 (231)
+....- ...+..+.++|+++|.++..-
T Consensus 240 ~d~~g~--------~~~~~~~~~~l~~~G~~v~~G 266 (352)
T 3fpc_A 240 VIAGGD--------VHTFAQAVKMIKPGSDIGNVN 266 (352)
T ss_dssp EECSSC--------TTHHHHHHHHEEEEEEEEECC
T ss_pred EECCCC--------hHHHHHHHHHHhcCCEEEEec
Confidence 863311 136788889999999998764
No 321
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=71.03 E-value=2.3 Score=33.50 Aligned_cols=78 Identities=12% Similarity=0.176 Sum_probs=45.6
Q ss_pred CCCCCeEEEEcCCC-CcchHHHhcCccccccceeeeeecCCcccccC---------------C----C--CCCCeeEEEE
Q 045799 70 NGNPKVVLEVGCGA-GNTIFPLVSHSEFREERVNAFVCNVVNDDLSR---------------N----V--NPSSVDVVTL 127 (231)
Q Consensus 70 ~~~~~~iLdvGcG~-G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~---------------~----~--~~~~fD~ii~ 127 (231)
..++.+||-+|+|. |..+..++... +.+++.++.+....+. . + ..+.+|+|+.
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~-----Ga~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~g~~d~vid 238 (340)
T 3s2e_A 164 TRPGQWVVISGIGGLGHVAVQYARAM-----GLRVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQKEIGGAHGVLV 238 (340)
T ss_dssp CCTTSEEEEECCSTTHHHHHHHHHHT-----TCEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHSSEEEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHC-----CCeEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHhCCCCCEEEE
Confidence 46789999999864 55666665322 2244555443322110 0 0 0125777765
Q ss_pred eeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEe
Q 045799 128 IFMLSAVSPKKMPLILQNIKAVLKPDGYILVCD 160 (231)
Q Consensus 128 ~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~ 160 (231)
... -...++.+.++|+++|.+++.-
T Consensus 239 ~~g--------~~~~~~~~~~~l~~~G~iv~~G 263 (340)
T 3s2e_A 239 TAV--------SPKAFSQAIGMVRRGGTIALNG 263 (340)
T ss_dssp SSC--------CHHHHHHHHHHEEEEEEEEECS
T ss_pred eCC--------CHHHHHHHHHHhccCCEEEEeC
Confidence 321 2346788899999999998753
No 322
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=69.92 E-value=5 Score=32.06 Aligned_cols=76 Identities=20% Similarity=0.192 Sum_probs=42.8
Q ss_pred CCCCCeEEEEcCCC-CcchHHHhcCccccccceeeeeecCCccccc-------------------CCCCCCCeeEEEEee
Q 045799 70 NGNPKVVLEVGCGA-GNTIFPLVSHSEFREERVNAFVCNVVNDDLS-------------------RNVNPSSVDVVTLIF 129 (231)
Q Consensus 70 ~~~~~~iLdvGcG~-G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~-------------------~~~~~~~fD~ii~~~ 129 (231)
..++.+||-+|+|. |..+..++... +.+++.++.++...+ .... +.+|+|+...
T Consensus 192 ~~~g~~VlV~GaG~vG~~aiqlak~~-----Ga~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~-~g~Dvvid~~ 265 (369)
T 1uuf_A 192 AGPGKKVGVVGIGGLGHMGIKLAHAM-----GAHVVAFTTSEAKREAAKALGADEVVNSRNADEMAAHL-KSFDFILNTV 265 (369)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT-----TCEEEEEESSGGGHHHHHHHTCSEEEETTCHHHHHTTT-TCEEEEEECC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHC-----CCEEEEEeCCHHHHHHHHHcCCcEEeccccHHHHHHhh-cCCCEEEECC
Confidence 36789999999864 55555555221 122333333322110 0111 4688887643
Q ss_pred eeeccCCCCHHHHHHHHHHhcCCCeEEEEE
Q 045799 130 MLSAVSPKKMPLILQNIKAVLKPDGYILVC 159 (231)
Q Consensus 130 ~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~ 159 (231)
.- . ..++.+.++|+++|.++..
T Consensus 266 g~-----~---~~~~~~~~~l~~~G~iv~~ 287 (369)
T 1uuf_A 266 AA-----P---HNLDDFTTLLKRDGTMTLV 287 (369)
T ss_dssp SS-----C---CCHHHHHTTEEEEEEEEEC
T ss_pred CC-----H---HHHHHHHHHhccCCEEEEe
Confidence 21 1 1356678899999998765
No 323
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=67.90 E-value=4.6 Score=32.58 Aligned_cols=86 Identities=15% Similarity=0.062 Sum_probs=46.3
Q ss_pred CCCCCeEEEEcCCC-CcchHHHhcCccccccceeeeeec------------------CCcccc-cC---C-CCCCCeeEE
Q 045799 70 NGNPKVVLEVGCGA-GNTIFPLVSHSEFREERVNAFVCN------------------VVNDDL-SR---N-VNPSSVDVV 125 (231)
Q Consensus 70 ~~~~~~iLdvGcG~-G~~~~~l~~~~~~~~~~~~~~~~D------------------~~~~~~-~~---~-~~~~~fD~i 125 (231)
..++.+||-+|+|. |..+..++...... +++.+| ...... .. . .....+|+|
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~----~Vi~~~~~~~~~~~a~~lGa~~i~~~~~~~~~~~~~~~~~g~g~Dvv 258 (398)
T 2dph_A 183 VKPGSHVYIAGAGPVGRCAAAGARLLGAA----CVIVGDQNPERLKLLSDAGFETIDLRNSAPLRDQIDQILGKPEVDCG 258 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCS----EEEEEESCHHHHHHHHTTTCEEEETTSSSCHHHHHHHHHSSSCEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCC----EEEEEcCCHHHHHHHHHcCCcEEcCCCcchHHHHHHHHhCCCCCCEE
Confidence 46789999999876 66666666221100 222222 221111 00 0 012368998
Q ss_pred EEeeeeecc------CCCCHHHHHHHHHHhcCCCeEEEEE
Q 045799 126 TLIFMLSAV------SPKKMPLILQNIKAVLKPDGYILVC 159 (231)
Q Consensus 126 i~~~~l~~~------~~~~~~~~l~~~~~~Lk~gG~l~i~ 159 (231)
+....-... ........+..+.++|+++|.+++.
T Consensus 259 id~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~ 298 (398)
T 2dph_A 259 VDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIP 298 (398)
T ss_dssp EECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECC
T ss_pred EECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEe
Confidence 875432110 0001234688889999999998765
No 324
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=67.82 E-value=5.8 Score=31.28 Aligned_cols=77 Identities=12% Similarity=0.094 Sum_probs=44.4
Q ss_pred CCCCCeEEEEcCCC-CcchHHHhcCccccccceeeeeecCCcccccC--------------CCCCCCeeEEEEeeeeecc
Q 045799 70 NGNPKVVLEVGCGA-GNTIFPLVSHSEFREERVNAFVCNVVNDDLSR--------------NVNPSSVDVVTLIFMLSAV 134 (231)
Q Consensus 70 ~~~~~~iLdvGcG~-G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~--------------~~~~~~fD~ii~~~~l~~~ 134 (231)
..++.+||-+|+|. |..+..++... +.+++.++.++...+. .+. +.+|+|+....-
T Consensus 174 ~~~g~~VlV~GaG~vG~~a~qla~~~-----Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~-~~~D~vid~~g~--- 244 (348)
T 3two_A 174 VTKGTKVGVAGFGGLGSMAVKYAVAM-----GAEVSVFARNEHKKQDALSMGVKHFYTDPKQCK-EELDFIISTIPT--- 244 (348)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHT-----TCEEEEECSSSTTHHHHHHTTCSEEESSGGGCC-SCEEEEEECCCS---
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHC-----CCeEEEEeCCHHHHHHHHhcCCCeecCCHHHHh-cCCCEEEECCCc---
Confidence 37789999999864 55555555221 2244454444322110 111 267887763321
Q ss_pred CCCCHHHHHHHHHHhcCCCeEEEEEe
Q 045799 135 SPKKMPLILQNIKAVLKPDGYILVCD 160 (231)
Q Consensus 135 ~~~~~~~~l~~~~~~Lk~gG~l~i~~ 160 (231)
+ ..+..+.++|+++|.+++.-
T Consensus 245 --~---~~~~~~~~~l~~~G~iv~~G 265 (348)
T 3two_A 245 --H---YDLKDYLKLLTYNGDLALVG 265 (348)
T ss_dssp --C---CCHHHHHTTEEEEEEEEECC
T ss_pred --H---HHHHHHHHHHhcCCEEEEEC
Confidence 1 14667788999999998763
No 325
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=67.34 E-value=8.1 Score=31.22 Aligned_cols=34 Identities=9% Similarity=0.085 Sum_probs=21.2
Q ss_pred CCeeEEEEeeeeeccCCCCHHHHHHHHHHhc----CCCeEEEEEe
Q 045799 120 SSVDVVTLIFMLSAVSPKKMPLILQNIKAVL----KPDGYILVCD 160 (231)
Q Consensus 120 ~~fD~ii~~~~l~~~~~~~~~~~l~~~~~~L----k~gG~l~i~~ 160 (231)
..+|+|+... ......+..+.+.| +++|.+++.-
T Consensus 281 ~g~D~vid~~-------g~~~~~~~~~~~~l~~~~~~~G~iv~~G 318 (404)
T 3ip1_A 281 LGAKLFLEAT-------GVPQLVWPQIEEVIWRARGINATVAIVA 318 (404)
T ss_dssp CCCSEEEECS-------SCHHHHHHHHHHHHHHCSCCCCEEEECS
T ss_pred CCCCEEEECC-------CCcHHHHHHHHHHHHhccCCCcEEEEeC
Confidence 3688888633 22323445555555 9999998753
No 326
>1ej6_A Lambda2; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_U
Probab=66.72 E-value=45 Score=30.87 Aligned_cols=130 Identities=17% Similarity=0.190 Sum_probs=70.5
Q ss_pred CCCCeEEEEcCCCCcchHHHhcC----------------ccccccceeeeeecCCcccccCCCCCCCeeEEEEeeeeecc
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSH----------------SEFREERVNAFVCNVVNDDLSRNVNPSSVDVVTLIFMLSAV 134 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~----------------~~~~~~~~~~~~~D~~~~~~~~~~~~~~fD~ii~~~~l~~~ 134 (231)
..+..+||+|+|.-.-...|.-. ..+.. ..++...|.....+. ....+|.+.|.+.|...
T Consensus 820 ~~~~~~lDlGTGPE~RiLsLiP~~~pvtm~D~RP~ae~~~~w~~-~T~f~~~DyL~~~~~---~~~~~D~vt~i~SLGAA 895 (1289)
T 1ej6_A 820 YDGDVVLDLGTGPEAKILELIPATSPVTCVDIRPTAQPSGCWNV-RTTFLELDYLSDGWI---TGVRGDIVTCMLSLGAA 895 (1289)
T ss_dssp CTTCCEEEESCCSSCGGGGTSCTTSCEEEEESSCCCSCSTTBSS-CEEEEESCTTSSSCG---GGCCCSEEEECSCHHHH
T ss_pred cccceEEEccCCCcceeeeecCCCCceEEecccCchhhhccccc-cceeeEcccccccee---ecCCCcEEEEEeechhh
Confidence 55689999999987766666511 11111 234455555444332 24578999999887743
Q ss_pred ---CCCCHHHHHHHHHHhcCCCeE-EEEEeccCCchhh---hhhhccccccccceEEeCCCeEEEeeCHHHHHHHHHH
Q 045799 135 ---SPKKMPLILQNIKAVLKPDGY-ILVCDYAIGDFAQ---VKLLDRNQMIGDSFYVRGDGTCSFYFSEDFLSTLFLE 205 (231)
Q Consensus 135 ---~~~~~~~~l~~~~~~Lk~gG~-l~i~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 205 (231)
..-.+...++++.+.+++.|. -+....+.+-... ...... ......+...+-+...+|.+...+.+++++
T Consensus 896 ~A~a~~tl~~~~~q~l~~~~~~~~~~l~lQlNcpL~s~~~vr~~LeI-d~~~~~Y~F~~~~R~EPY~~~~~l~~ai~~ 972 (1289)
T 1ej6_A 896 AAGKSMTFDAAFQQLIKVLSKSTANVVLVQVNCPTDVVRSIKGYLEI-DSTNKRYRFPKFGRDEPYSDMDALEKICRT 972 (1289)
T ss_dssp HHHHTCCHHHHHHHHHHHHHTSCCSEEEEECCCCSSSCCCBTTTBEE-ETTTTEEEETTTTEEEECCCHHHHHHHHHH
T ss_pred hhccCCcHHHHHHHHHHHHHhcCccEEEEEecCCCCCCCCCCCeEEE-ecccceEEcCCCCcCCCCCCHHHHHHHHHH
Confidence 124567788888888876554 3332222221110 000000 001111222333444678899998888876
No 327
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=64.27 E-value=2.8 Score=31.96 Aligned_cols=47 Identities=19% Similarity=0.344 Sum_probs=32.5
Q ss_pred CCeeEEEEeee----eeccCCCCH-------HHHHHHHHHhcCCCeEEEEEeccCCchhh
Q 045799 120 SSVDVVTLIFM----LSAVSPKKM-------PLILQNIKAVLKPDGYILVCDYAIGDFAQ 168 (231)
Q Consensus 120 ~~fD~ii~~~~----l~~~~~~~~-------~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~ 168 (231)
++||+|++.-- .||. ++- .-+-....++|+|||.+++..++..+...
T Consensus 210 grYDlVfvNv~TpyR~HHY--QQCeDHA~~l~mL~~~al~~L~pGGtlv~~aYGyADR~S 267 (324)
T 3trk_A 210 GRYDLVVINIHTPFRIHHY--QQCVDHAMKLQMLGGDSLRLLKPGGSLLIRAYGYADRTS 267 (324)
T ss_dssp CCEEEEEEECCCCCCSSHH--HHHHHHHHHHHHHHHHGGGGEEEEEEEEEEECCCCSHHH
T ss_pred CceeEEEEecCCccccchH--HHHHHHHHHHHHHHHHHHhhcCCCceEEEEeecccccch
Confidence 79999999652 4554 221 22334556899999999999887776543
No 328
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=63.40 E-value=3.4 Score=32.93 Aligned_cols=77 Identities=17% Similarity=0.119 Sum_probs=43.9
Q ss_pred CCCCCeEEEEcCCC-CcchHHHhcCccccccceeeeeecCCccccc-------------------C----CCCCCCeeEE
Q 045799 70 NGNPKVVLEVGCGA-GNTIFPLVSHSEFREERVNAFVCNVVNDDLS-------------------R----NVNPSSVDVV 125 (231)
Q Consensus 70 ~~~~~~iLdvGcG~-G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~-------------------~----~~~~~~fD~i 125 (231)
..++.+||-+|+|. |..+..++... +.+++.++.++...+ . ......+|+|
T Consensus 187 ~~~g~~VlV~G~G~vG~~a~qla~~~-----Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~~~g~g~D~v 261 (363)
T 3uog_A 187 LRAGDRVVVQGTGGVALFGLQIAKAT-----GAEVIVTSSSREKLDRAFALGADHGINRLEEDWVERVYALTGDRGADHI 261 (363)
T ss_dssp CCTTCEEEEESSBHHHHHHHHHHHHT-----TCEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc-----CCEEEEEecCchhHHHHHHcCCCEEEcCCcccHHHHHHHHhCCCCceEE
Confidence 47789999999764 44555554221 223334333321110 0 0122378988
Q ss_pred EEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEe
Q 045799 126 TLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCD 160 (231)
Q Consensus 126 i~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~ 160 (231)
+.... . ..+..+.++|+++|.+++.-
T Consensus 262 id~~g-----~----~~~~~~~~~l~~~G~iv~~G 287 (363)
T 3uog_A 262 LEIAG-----G----AGLGQSLKAVAPDGRISVIG 287 (363)
T ss_dssp EEETT-----S----SCHHHHHHHEEEEEEEEEEC
T ss_pred EECCC-----h----HHHHHHHHHhhcCCEEEEEe
Confidence 87542 1 24667788999999998764
No 329
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=62.95 E-value=11 Score=29.95 Aligned_cols=31 Identities=10% Similarity=0.028 Sum_probs=22.5
Q ss_pred CeeEEEEeeeeeccCCCCHHHHHHHHHHhcCCC-eEEEEE
Q 045799 121 SVDVVTLIFMLSAVSPKKMPLILQNIKAVLKPD-GYILVC 159 (231)
Q Consensus 121 ~fD~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~g-G~l~i~ 159 (231)
.+|+|+.... ....+..+.++|+++ |.+++.
T Consensus 261 g~D~vid~~g--------~~~~~~~~~~~l~~~~G~iv~~ 292 (374)
T 2jhf_A 261 GVDFSFEVIG--------RLDTMVTALSCCQEAYGVSVIV 292 (374)
T ss_dssp CBSEEEECSC--------CHHHHHHHHHHBCTTTCEEEEC
T ss_pred CCcEEEECCC--------CHHHHHHHHHHhhcCCcEEEEe
Confidence 6888876331 134678888999999 998775
No 330
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=61.53 E-value=9.9 Score=30.04 Aligned_cols=33 Identities=9% Similarity=-0.000 Sum_probs=23.1
Q ss_pred CCeeEEEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEe
Q 045799 120 SSVDVVTLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCD 160 (231)
Q Consensus 120 ~~fD~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~ 160 (231)
+.+|+|+.... -...+..+.++|+++|.++..-
T Consensus 241 ~g~D~vid~~g--------~~~~~~~~~~~l~~~G~iv~~G 273 (356)
T 1pl8_A 241 CKPEVTIECTG--------AEASIQAGIYATRSGGTLVLVG 273 (356)
T ss_dssp SCCSEEEECSC--------CHHHHHHHHHHSCTTCEEEECS
T ss_pred CCCCEEEECCC--------ChHHHHHHHHHhcCCCEEEEEe
Confidence 35788776331 1246778889999999998753
No 331
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=61.53 E-value=10 Score=30.13 Aligned_cols=32 Identities=16% Similarity=-0.061 Sum_probs=23.1
Q ss_pred CeeEEEEeeeeeccCCCCHHHHHHHHHHhcCCC-eEEEEEe
Q 045799 121 SVDVVTLIFMLSAVSPKKMPLILQNIKAVLKPD-GYILVCD 160 (231)
Q Consensus 121 ~fD~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~g-G~l~i~~ 160 (231)
.+|+|+.... ....++.+.++|+++ |.+++.-
T Consensus 261 g~Dvvid~~g--------~~~~~~~~~~~l~~~~G~iv~~G 293 (373)
T 1p0f_A 261 GVDYAVECAG--------RIETMMNALQSTYCGSGVTVVLG 293 (373)
T ss_dssp CBSEEEECSC--------CHHHHHHHHHTBCTTTCEEEECC
T ss_pred CCCEEEECCC--------CHHHHHHHHHHHhcCCCEEEEEc
Confidence 6888876331 134678888999999 9987753
No 332
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=61.50 E-value=11 Score=30.11 Aligned_cols=32 Identities=13% Similarity=0.015 Sum_probs=22.9
Q ss_pred CeeEEEEeeeeeccCCCCHHHHHHHHHHhcCCC-eEEEEEe
Q 045799 121 SVDVVTLIFMLSAVSPKKMPLILQNIKAVLKPD-GYILVCD 160 (231)
Q Consensus 121 ~fD~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~g-G~l~i~~ 160 (231)
.+|+|+.... ....+..+.++|+++ |.+++.-
T Consensus 262 g~D~vid~~g--------~~~~~~~~~~~l~~~~G~iv~~G 294 (374)
T 1cdo_A 262 GVDFSLECVG--------NVGVMRNALESCLKGWGVSVLVG 294 (374)
T ss_dssp CBSEEEECSC--------CHHHHHHHHHTBCTTTCEEEECS
T ss_pred CCCEEEECCC--------CHHHHHHHHHHhhcCCcEEEEEc
Confidence 5788776331 134678889999999 9988753
No 333
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=60.74 E-value=11 Score=29.98 Aligned_cols=32 Identities=13% Similarity=0.040 Sum_probs=23.1
Q ss_pred CeeEEEEeeeeeccCCCCHHHHHHHHHHhcCCC-eEEEEEe
Q 045799 121 SVDVVTLIFMLSAVSPKKMPLILQNIKAVLKPD-GYILVCD 160 (231)
Q Consensus 121 ~fD~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~g-G~l~i~~ 160 (231)
.+|+|+.... ....++.+.++|+++ |.+++.-
T Consensus 260 g~D~vid~~g--------~~~~~~~~~~~l~~~~G~iv~~G 292 (373)
T 2fzw_A 260 GVDYSFECIG--------NVKVMRAALEACHKGWGVSVVVG 292 (373)
T ss_dssp CBSEEEECSC--------CHHHHHHHHHTBCTTTCEEEECS
T ss_pred CCCEEEECCC--------cHHHHHHHHHhhccCCcEEEEEe
Confidence 6888876432 134678889999999 9998753
No 334
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=60.39 E-value=25 Score=28.18 Aligned_cols=18 Identities=17% Similarity=0.209 Sum_probs=16.2
Q ss_pred CeEEEEcCCCCcchHHHh
Q 045799 74 KVVLEVGCGAGNTIFPLV 91 (231)
Q Consensus 74 ~~iLdvGcG~G~~~~~l~ 91 (231)
.++||+-||.|.++..+.
T Consensus 3 ~~vidLFsG~GGlslG~~ 20 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAA 20 (376)
T ss_dssp CEEEEETCTTSHHHHHHH
T ss_pred CeEEEEccCcCHHHHHHH
Confidence 589999999999998876
No 335
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=59.79 E-value=4.6 Score=31.59 Aligned_cols=31 Identities=19% Similarity=0.175 Sum_probs=22.9
Q ss_pred CCeeEEEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEE
Q 045799 120 SSVDVVTLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVC 159 (231)
Q Consensus 120 ~~fD~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~ 159 (231)
+.+|+++.... ...+..+.++|+++|.+++.
T Consensus 213 ~~~d~vi~~~g---------~~~~~~~~~~l~~~G~~v~~ 243 (333)
T 1v3u_A 213 DGYDCYFDNVG---------GEFLNTVLSQMKDFGKIAIC 243 (333)
T ss_dssp TCEEEEEESSC---------HHHHHHHHTTEEEEEEEEEC
T ss_pred CCCeEEEECCC---------hHHHHHHHHHHhcCCEEEEE
Confidence 46888876442 13577888999999999775
No 336
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=59.02 E-value=6.1 Score=30.50 Aligned_cols=46 Identities=15% Similarity=0.250 Sum_probs=30.6
Q ss_pred CCeeEEEEeeee----ecc----CC-CCHHHHHHHHHHhcCCCeEEEEEeccCCc
Q 045799 120 SSVDVVTLIFML----SAV----SP-KKMPLILQNIKAVLKPDGYILVCDYAIGD 165 (231)
Q Consensus 120 ~~fD~ii~~~~l----~~~----~~-~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~ 165 (231)
+++|+|++...- ||. +- .-..-++..+.++|+|||.+++..+...+
T Consensus 205 ~k~DvV~SDMApn~sGh~yqQC~DHarii~Lal~fA~~vLkPGGtfV~KvyggaD 259 (320)
T 2hwk_A 205 PKYDIIFVNVRTPYKYHHYQQCEDHAIKLSMLTKKACLHLNPGGTCVSIGYGYAD 259 (320)
T ss_dssp CCEEEEEEECCCCCCSCHHHHHHHHHHHHHHTHHHHGGGEEEEEEEEEEECCCCS
T ss_pred CcCCEEEEcCCCCCCCccccccchHHHHHHHHHHHHHHhcCCCceEEEEEecCCc
Confidence 679999995532 221 00 11123456677999999999998777764
No 337
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=58.69 E-value=37 Score=29.66 Aligned_cols=108 Identities=16% Similarity=0.242 Sum_probs=64.4
Q ss_pred ceeeeeecCCccc-cc-----CCC-CCCCeeEEEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEeccCCc---hhhh
Q 045799 100 RVNAFVCNVVNDD-LS-----RNV-NPSSVDVVTLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYAIGD---FAQV 169 (231)
Q Consensus 100 ~~~~~~~D~~~~~-~~-----~~~-~~~~fD~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~---~~~~ 169 (231)
....+.+|+.... +. ..+ ....--++++-.++.|+++++..++++.+.+ + ++|.+++.+...+. ....
T Consensus 189 ~y~~v~~Dl~~~~~~~~~l~~~g~~d~~~ptl~i~Egvl~Yl~~~~~~~ll~~~~~-~-~~~~~~~~e~~~~~~~~d~f~ 266 (695)
T 2zwa_A 189 KYLARPCDLNDSKMFSTLLNECQLYDPNVVKVFVAEVSLAYMKPERSDSIIEATSK-M-ENSHFIILEQLIPKGPFEPFS 266 (695)
T ss_dssp SEEEEECCTTCHHHHHHHHHHTTTTCTTEEEEEEEESSGGGSCHHHHHHHHHHHHT-S-SSEEEEEEEECCTTCTTSHHH
T ss_pred CeeEEeCcCCCcHHHHHHHhhccCCCCCCCEEEeeeeEEEEcCHHHHHHHHHHHhh-C-CCceEEEEEeecCCCCCChHH
Confidence 5667788887632 11 123 3455677888888999998899999999985 4 67777776644432 1111
Q ss_pred h-hhccccccccceEEeCCCeEEEeeCHHHHHHHHHHcCceEEEEE
Q 045799 170 K-LLDRNQMIGDSFYVRGDGTCSFYFSEDFLSTLFLEAGFSTVDIN 214 (231)
Q Consensus 170 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~ 214 (231)
. ........+..+. ....+.+.++..+.|.+.||+.+...
T Consensus 267 ~~m~~~~~~~g~~l~-----~~~~~~~~~~~~~~~~~~Gw~~v~~~ 307 (695)
T 2zwa_A 267 KQMLAHFKRNDSPLQ-----SVLKYNTIESQVQRFNKLGFAYVNVG 307 (695)
T ss_dssp HHHHHHHHHTTCCCC-----GGGTCCSHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHcCCCCC-----ccccCCCHHHHHHHHHHCCCCCccee
Confidence 0 0000000000000 00124688999999999999865543
No 338
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=58.49 E-value=3.8 Score=32.50 Aligned_cols=30 Identities=17% Similarity=0.259 Sum_probs=24.6
Q ss_pred CCHHHHHHHHHHhcCCCeEEEEEeccCCch
Q 045799 137 KKMPLILQNIKAVLKPDGYILVCDYAIGDF 166 (231)
Q Consensus 137 ~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~ 166 (231)
++++.+|..+.++|+|||++++..|..-..
T Consensus 251 ~~L~~~L~~a~~~L~~gGRl~VISFHSLED 280 (347)
T 3tka_A 251 EEIEQALKSSLNVLAPGGRLSIISFHSLED 280 (347)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEESSHHHH
T ss_pred HHHHHHHHHHHHHhCCCCEEEEEecCchhH
Confidence 456788999999999999999988766543
No 339
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=58.13 E-value=6.1 Score=30.47 Aligned_cols=28 Identities=21% Similarity=0.361 Sum_probs=23.3
Q ss_pred CCHHHHHHHHHHhcCCCeEEEEEeccCC
Q 045799 137 KKMPLILQNIKAVLKPDGYILVCDYAIG 164 (231)
Q Consensus 137 ~~~~~~l~~~~~~Lk~gG~l~i~~~~~~ 164 (231)
+.+..+|..+.++|+|||++++..|..-
T Consensus 210 ~~L~~~L~~a~~~L~~gGrl~visfHSL 237 (285)
T 1wg8_A 210 NALKEFLEQAAEVLAPGGRLVVIAFHSL 237 (285)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEECSHH
T ss_pred HHHHHHHHHHHHHhcCCCEEEEEecCcH
Confidence 4567889999999999999999866554
No 340
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=57.33 E-value=13 Score=29.61 Aligned_cols=32 Identities=9% Similarity=0.027 Sum_probs=22.9
Q ss_pred CeeEEEEeeeeeccCCCCHHHHHHHHHHhcCCC-eEEEEEe
Q 045799 121 SVDVVTLIFMLSAVSPKKMPLILQNIKAVLKPD-GYILVCD 160 (231)
Q Consensus 121 ~fD~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~g-G~l~i~~ 160 (231)
.+|+|+.... -...+..+.++|++| |.+++.-
T Consensus 263 g~D~vid~~g--------~~~~~~~~~~~l~~g~G~iv~~G 295 (378)
T 3uko_A 263 GVDYSFECIG--------NVSVMRAALECCHKGWGTSVIVG 295 (378)
T ss_dssp CBSEEEECSC--------CHHHHHHHHHTBCTTTCEEEECS
T ss_pred CCCEEEECCC--------CHHHHHHHHHHhhccCCEEEEEc
Confidence 6888876431 134678888999996 9988753
No 341
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=56.59 E-value=5.7 Score=30.59 Aligned_cols=85 Identities=12% Similarity=-0.026 Sum_probs=44.5
Q ss_pred CCeEEEEcCCCCcchHHHhcCcc------------------cc-ccceeeeeecCCcccccCCCCCCCeeEEEEeeeeec
Q 045799 73 PKVVLEVGCGAGNTIFPLVSHSE------------------FR-EERVNAFVCNVVNDDLSRNVNPSSVDVVTLIFMLSA 133 (231)
Q Consensus 73 ~~~iLdvGcG~G~~~~~l~~~~~------------------~~-~~~~~~~~~D~~~~~~~~~~~~~~fD~ii~~~~l~~ 133 (231)
+..+||+=+|||.++..+++... .. ..++++...|.........-+..+||+|++-=-.+.
T Consensus 92 ~~~~LDlfaGSGaLgiEaLS~~d~~vfvE~~~~a~~~L~~Nl~~~~~~~V~~~D~~~~L~~l~~~~~~fdLVfiDPPYe~ 171 (283)
T 2oo3_A 92 LNSTLSYYPGSPYFAINQLRSQDRLYLCELHPTEYNFLLKLPHFNKKVYVNHTDGVSKLNALLPPPEKRGLIFIDPSYER 171 (283)
T ss_dssp SSSSCCEEECHHHHHHHHSCTTSEEEEECCSHHHHHHHTTSCCTTSCEEEECSCHHHHHHHHCSCTTSCEEEEECCCCCS
T ss_pred CCCceeEeCCcHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHhCcCCcEEEEeCcHHHHHHHhcCCCCCccEEEECCCCCC
Confidence 35679999999999999884211 00 122334444432111100112346888877322221
Q ss_pred cCCCCHHHHHHHHHH--hcCCCeEEEEE
Q 045799 134 VSPKKMPLILQNIKA--VLKPDGYILVC 159 (231)
Q Consensus 134 ~~~~~~~~~l~~~~~--~Lk~gG~l~i~ 159 (231)
- ++...+++.+.+ .+.++|++++.
T Consensus 172 k--~~~~~vl~~L~~~~~r~~~Gi~v~W 197 (283)
T 2oo3_A 172 K--EEYKEIPYAIKNAYSKFSTGLYCVW 197 (283)
T ss_dssp T--THHHHHHHHHHHHHHHCTTSEEEEE
T ss_pred C--cHHHHHHHHHHHhCccCCCeEEEEE
Confidence 1 345556655554 34577887775
No 342
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=56.05 E-value=13 Score=29.66 Aligned_cols=32 Identities=16% Similarity=-0.052 Sum_probs=22.8
Q ss_pred CeeEEEEeeeeeccCCCCHHHHHHHHHHhcCCC-eEEEEEe
Q 045799 121 SVDVVTLIFMLSAVSPKKMPLILQNIKAVLKPD-GYILVCD 160 (231)
Q Consensus 121 ~fD~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~g-G~l~i~~ 160 (231)
.+|+|+.... -...++.+.++|+++ |.+++.-
T Consensus 265 g~Dvvid~~G--------~~~~~~~~~~~l~~~~G~iv~~G 297 (376)
T 1e3i_A 265 GVDYSLDCAG--------TAQTLKAAVDCTVLGWGSCTVVG 297 (376)
T ss_dssp CBSEEEESSC--------CHHHHHHHHHTBCTTTCEEEECC
T ss_pred CccEEEECCC--------CHHHHHHHHHHhhcCCCEEEEEC
Confidence 5788776331 134678889999999 9988753
No 343
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=55.41 E-value=15 Score=28.94 Aligned_cols=33 Identities=6% Similarity=-0.055 Sum_probs=23.3
Q ss_pred CCeeEEEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEe
Q 045799 120 SSVDVVTLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCD 160 (231)
Q Consensus 120 ~~fD~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~ 160 (231)
+.+|+|+.... ....++.+.++|+++|.++..-
T Consensus 239 ~g~D~vid~~g--------~~~~~~~~~~~l~~~G~iv~~G 271 (352)
T 1e3j_A 239 DLPNVTIDCSG--------NEKCITIGINITRTGGTLMLVG 271 (352)
T ss_dssp SCCSEEEECSC--------CHHHHHHHHHHSCTTCEEEECS
T ss_pred CCCCEEEECCC--------CHHHHHHHHHHHhcCCEEEEEe
Confidence 45888876432 1236778889999999998753
No 344
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=54.88 E-value=5.1 Score=31.40 Aligned_cols=31 Identities=19% Similarity=0.226 Sum_probs=22.9
Q ss_pred CCeeEEEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEE
Q 045799 120 SSVDVVTLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVC 159 (231)
Q Consensus 120 ~~fD~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~ 159 (231)
+.+|+|+.... ...+..+.++|+++|.+++.
T Consensus 217 ~~~d~vi~~~g---------~~~~~~~~~~l~~~G~iv~~ 247 (336)
T 4b7c_A 217 KGIDVFFDNVG---------GEILDTVLTRIAFKARIVLC 247 (336)
T ss_dssp TCEEEEEESSC---------HHHHHHHHTTEEEEEEEEEC
T ss_pred CCceEEEECCC---------cchHHHHHHHHhhCCEEEEE
Confidence 46888776332 13678888999999999875
No 345
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=53.60 E-value=13 Score=29.42 Aligned_cols=33 Identities=12% Similarity=0.093 Sum_probs=24.1
Q ss_pred CCCeeEEEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEE
Q 045799 119 PSSVDVVTLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVC 159 (231)
Q Consensus 119 ~~~fD~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~ 159 (231)
.+.+|+|+... --...+..+.++|+++|.+++.
T Consensus 237 ~~g~Dvvid~~--------g~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 237 LGAPAFVFSTT--------HTDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp SCCEEEEEECS--------CHHHHHHHHHHHSCTTCEEEEC
T ss_pred CCCceEEEECC--------CchhhHHHHHHHhcCCCEEEEE
Confidence 35788877632 1234678889999999999876
No 346
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=53.00 E-value=9.9 Score=29.85 Aligned_cols=32 Identities=16% Similarity=0.139 Sum_probs=23.2
Q ss_pred CCeeEEEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEe
Q 045799 120 SSVDVVTLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCD 160 (231)
Q Consensus 120 ~~fD~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~ 160 (231)
..+|+|+.... . ..++.+.++|+++|.++..-
T Consensus 234 ~~~d~vi~~~g-~--------~~~~~~~~~l~~~G~~v~~g 265 (343)
T 2eih_A 234 KGADKVVDHTG-A--------LYFEGVIKATANGGRIAIAG 265 (343)
T ss_dssp TCEEEEEESSC-S--------SSHHHHHHHEEEEEEEEESS
T ss_pred CCceEEEECCC-H--------HHHHHHHHhhccCCEEEEEe
Confidence 47899887553 1 14677788999999987753
No 347
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=52.85 E-value=4.9 Score=31.63 Aligned_cols=79 Identities=15% Similarity=0.222 Sum_probs=45.4
Q ss_pred CCCCCeEEEEcCCC-CcchHHHhcCccccccceeeeeecCCcccccC---------------------CC-CCCCeeEEE
Q 045799 70 NGNPKVVLEVGCGA-GNTIFPLVSHSEFREERVNAFVCNVVNDDLSR---------------------NV-NPSSVDVVT 126 (231)
Q Consensus 70 ~~~~~~iLdvGcG~-G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~---------------------~~-~~~~fD~ii 126 (231)
..++.+||-+|+|. |..+..++.... ..+++.+|.++...+. .. ....+|+|+
T Consensus 169 ~~~g~~vlv~GaG~vG~~a~qla~~~g----~~~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~v~~~t~g~g~d~v~ 244 (345)
T 3jv7_A 169 LGPGSTAVVIGVGGLGHVGIQILRAVS----AARVIAVDLDDDRLALAREVGADAAVKSGAGAADAIRELTGGQGATAVF 244 (345)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHC----CCEEEEEESCHHHHHHHHHTTCSEEEECSTTHHHHHHHHHGGGCEEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC----CCEEEEEcCCHHHHHHHHHcCCCEEEcCCCcHHHHHHHHhCCCCCeEEE
Confidence 36788999999864 555555552211 2234444444322110 00 112577777
Q ss_pred EeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEe
Q 045799 127 LIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCD 160 (231)
Q Consensus 127 ~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~ 160 (231)
.... -...+..+.++|+++|.+++.-
T Consensus 245 d~~G--------~~~~~~~~~~~l~~~G~iv~~G 270 (345)
T 3jv7_A 245 DFVG--------AQSTIDTAQQVVAVDGHISVVG 270 (345)
T ss_dssp ESSC--------CHHHHHHHHHHEEEEEEEEECS
T ss_pred ECCC--------CHHHHHHHHHHHhcCCEEEEEC
Confidence 6321 1347788899999999998763
No 348
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=52.70 E-value=10 Score=30.69 Aligned_cols=21 Identities=19% Similarity=0.358 Sum_probs=17.5
Q ss_pred CCCCeEEEEcCCCCcchHHHh
Q 045799 71 GNPKVVLEVGCGAGNTIFPLV 91 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~ 91 (231)
+....|+|+|.|+|.++..++
T Consensus 79 p~~~~ivElGaG~GtLa~diL 99 (387)
T 1zkd_A 79 PQTLRLIEIGPGRGTMMADAL 99 (387)
T ss_dssp CSSEEEEEECCTTSHHHHHHH
T ss_pred CCCcEEEEECCCcchHHHHHH
Confidence 445689999999999988776
No 349
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=52.37 E-value=9.8 Score=29.94 Aligned_cols=33 Identities=21% Similarity=0.230 Sum_probs=23.8
Q ss_pred CCeeEEEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEe
Q 045799 120 SSVDVVTLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCD 160 (231)
Q Consensus 120 ~~fD~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~ 160 (231)
..+|+|+.... ....++.+.++|+++|.++..-
T Consensus 235 ~g~D~vid~~g--------~~~~~~~~~~~l~~~G~iv~~g 267 (348)
T 2d8a_A 235 NGVDVFLEFSG--------APKALEQGLQAVTPAGRVSLLG 267 (348)
T ss_dssp SCEEEEEECSC--------CHHHHHHHHHHEEEEEEEEECC
T ss_pred CCCCEEEECCC--------CHHHHHHHHHHHhcCCEEEEEc
Confidence 36888887432 1346788889999999987753
No 350
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=51.77 E-value=11 Score=29.84 Aligned_cols=32 Identities=16% Similarity=0.338 Sum_probs=23.1
Q ss_pred CCeeEEEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEe
Q 045799 120 SSVDVVTLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCD 160 (231)
Q Consensus 120 ~~fD~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~ 160 (231)
..+|+|+.... ...+....++|+++|.+++.-
T Consensus 238 ~~~D~vi~~~G---------~~~~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 238 KGIDIIIEMLA---------NVNLSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp TCEEEEEESCH---------HHHHHHHHHHEEEEEEEEECC
T ss_pred CCcEEEEECCC---------hHHHHHHHHhccCCCEEEEEe
Confidence 36888876442 135677889999999998753
No 351
>3iyl_W VP1; non-enveloped virus, membrane penetration protein, autocleav myristol group, icosahedral virus; HET: MYR; 3.30A {Grass carp reovirus} PDB: 3k1q_A
Probab=51.76 E-value=36 Score=31.68 Aligned_cols=132 Identities=14% Similarity=0.159 Sum_probs=73.1
Q ss_pred CCeEEEEcCCCCcchHHHhcC----------------ccccccceeeeeecCCcccccCCCCCCCeeEEEEeeeeecc--
Q 045799 73 PKVVLEVGCGAGNTIFPLVSH----------------SEFREERVNAFVCNVVNDDLSRNVNPSSVDVVTLIFMLSAV-- 134 (231)
Q Consensus 73 ~~~iLdvGcG~G~~~~~l~~~----------------~~~~~~~~~~~~~D~~~~~~~~~~~~~~fD~ii~~~~l~~~-- 134 (231)
+..+||+|+|.-+-...+... ..+...-.+++..|.....+. ....+|++.|.+.|...
T Consensus 828 ~~~~lDLGTGPEcRiLsliP~~~pvtmvD~RP~ae~~~~w~~~~T~yi~~DYl~~~~~---~~~~~d~vtailSLGAA~a 904 (1299)
T 3iyl_W 828 LAHLLDLGTGPECRILSLIPPTLQVTMSDSRPCAELMASFDPALTAYVQGDYSTAAFW---NGIRCDSATAIFTIGAAAA 904 (1299)
T ss_dssp GCSEEEETCCSSCSGGGSSCTTSCEEEEESSCCSSCGGGBCTTTEEEEESCSSSGGGG---SSCCCSEEEETTTHHHHHH
T ss_pred CCEEEEcCCCccceeeecCCCCCceEEEecCCccccccccccccceeEEeccccceeE---ecCCCCEEEEeeechhhhh
Confidence 478999999988766666511 111111145666666655543 34678999998877643
Q ss_pred -CCCCHHHHHHHHHHhcCCCeEEE-EEeccCCchh---hhhhhccccccccceEEeCCCeEEEeeCHHHHHHHHHHcCce
Q 045799 135 -SPKKMPLILQNIKAVLKPDGYIL-VCDYAIGDFA---QVKLLDRNQMIGDSFYVRGDGTCSFYFSEDFLSTLFLEAGFS 209 (231)
Q Consensus 135 -~~~~~~~~l~~~~~~Lk~gG~l~-i~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~ 209 (231)
.--++...++++.+.+++.|.-- +...+.+-.. ...+... ......+...+-+...+|.+..++.+++.+. |-
T Consensus 905 ~a~~tl~~~l~~~l~~~~~~~v~~l~lQLN~Pl~~~~~~r~~LeI-d~~~~~Y~F~~~gR~EPY~~~~~~~~~i~~~-~P 982 (1299)
T 3iyl_W 905 AAGTDLIAFVQQLIPRIVAAGGTRMWLQLNTPLYEVSSLPDLIEI-DLRDHVYRFNGGERVEPYADPVPLQQAIAAL-LP 982 (1299)
T ss_dssp HTTCCHHHHHHHHHHHHHHTTCSEEEECCCCCSSCSCCBTTTEEE-ETTTTEEEETTTTBCCBCCCHHHHHHHHHHH-SS
T ss_pred hCCCcHHHHHHHHHHHHHhcCceEEEEEecCCCCCCCCCCceEEE-ecccceEEcCCCCcCCCCCCHHHHHHHHHHh-CC
Confidence 12467788888888887765432 2222222111 0000000 0111112222333345688999999998875 53
No 352
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=50.34 E-value=9.9 Score=30.16 Aligned_cols=32 Identities=22% Similarity=0.210 Sum_probs=23.5
Q ss_pred CCeeEEEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEe
Q 045799 120 SSVDVVTLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCD 160 (231)
Q Consensus 120 ~~fD~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~ 160 (231)
+.+|+|+.... . ..++.+.++|+++|.+++.-
T Consensus 230 ~g~D~vid~~g-------~--~~~~~~~~~l~~~G~iv~~g 261 (362)
T 2c0c_A 230 EGVDVVYESVG-------G--AMFDLAVDALATKGRLIVIG 261 (362)
T ss_dssp TCEEEEEECSC-------T--HHHHHHHHHEEEEEEEEECC
T ss_pred CCCCEEEECCC-------H--HHHHHHHHHHhcCCEEEEEe
Confidence 46888876432 1 47788899999999987753
No 353
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=49.75 E-value=7.6 Score=30.36 Aligned_cols=31 Identities=19% Similarity=0.028 Sum_probs=23.1
Q ss_pred CCeeEEEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEE
Q 045799 120 SSVDVVTLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVC 159 (231)
Q Consensus 120 ~~fD~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~ 159 (231)
..+|+|+....- ..+..+.++|+++|.+++.
T Consensus 216 ~g~D~vid~~g~---------~~~~~~~~~l~~~G~iv~~ 246 (334)
T 3qwb_A 216 KGVDASFDSVGK---------DTFEISLAALKRKGVFVSF 246 (334)
T ss_dssp SCEEEEEECCGG---------GGHHHHHHHEEEEEEEEEC
T ss_pred CCceEEEECCCh---------HHHHHHHHHhccCCEEEEE
Confidence 468988874421 3567788999999999875
No 354
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=49.31 E-value=11 Score=30.72 Aligned_cols=22 Identities=14% Similarity=0.413 Sum_probs=19.2
Q ss_pred CCCCCeEEEEcCCCCcchHHHh
Q 045799 70 NGNPKVVLEVGCGAGNTIFPLV 91 (231)
Q Consensus 70 ~~~~~~iLdvGcG~G~~~~~l~ 91 (231)
..++..++|||++.|..+..++
T Consensus 224 l~~~~~viDvGAn~G~~s~~~a 245 (409)
T 2py6_A 224 FSDSEKMVDCGASIGESLAGLI 245 (409)
T ss_dssp CCSSCEEEEETCTTSHHHHHHH
T ss_pred cCCCCEEEECCCCcCHHHHHHH
Confidence 3678999999999999998766
No 355
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=48.64 E-value=12 Score=29.48 Aligned_cols=77 Identities=16% Similarity=0.175 Sum_probs=43.3
Q ss_pred CCCCCeEEEEcC--CCCcchHHHhcCccccccceeeeeecCCccccc------------------C----CCCCCCeeEE
Q 045799 70 NGNPKVVLEVGC--GAGNTIFPLVSHSEFREERVNAFVCNVVNDDLS------------------R----NVNPSSVDVV 125 (231)
Q Consensus 70 ~~~~~~iLdvGc--G~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~------------------~----~~~~~~fD~i 125 (231)
..++.+||-+|+ |.|..+..++... +.+++.++.+....+ . ......+|+|
T Consensus 157 ~~~g~~VlV~Gasg~iG~~~~~~a~~~-----Ga~Vi~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~v~~~~~~~g~Dvv 231 (342)
T 4eye_A 157 LRAGETVLVLGAAGGIGTAAIQIAKGM-----GAKVIAVVNRTAATEFVKSVGADIVLPLEEGWAKAVREATGGAGVDMV 231 (342)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHT-----TCEEEEEESSGGGHHHHHHHTCSEEEESSTTHHHHHHHHTTTSCEEEE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHc-----CCEEEEEeCCHHHHHHHHhcCCcEEecCchhHHHHHHHHhCCCCceEE
Confidence 367899999997 3455555555221 223333333221110 0 0122368988
Q ss_pred EEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEe
Q 045799 126 TLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCD 160 (231)
Q Consensus 126 i~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~ 160 (231)
+....- ..+..+.++|+++|.+++.-
T Consensus 232 id~~g~---------~~~~~~~~~l~~~G~iv~~G 257 (342)
T 4eye_A 232 VDPIGG---------PAFDDAVRTLASEGRLLVVG 257 (342)
T ss_dssp EESCC-----------CHHHHHHTEEEEEEEEEC-
T ss_pred EECCch---------hHHHHHHHhhcCCCEEEEEE
Confidence 874432 14667888999999998753
No 356
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=47.14 E-value=6 Score=31.19 Aligned_cols=32 Identities=6% Similarity=0.117 Sum_probs=23.1
Q ss_pred CeeEEEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEe
Q 045799 121 SVDVVTLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCD 160 (231)
Q Consensus 121 ~fD~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~ 160 (231)
.+|+|+.... ....++.+.+.|+++|.++..-
T Consensus 238 ~~D~vi~~~g--------~~~~~~~~~~~l~~~G~iv~~g 269 (347)
T 2hcy_A 238 GAHGVINVSV--------SEAAIEASTRYVRANGTTVLVG 269 (347)
T ss_dssp CEEEEEECSS--------CHHHHHHHTTSEEEEEEEEECC
T ss_pred CCCEEEECCC--------cHHHHHHHHHHHhcCCEEEEEe
Confidence 5888876432 1246788889999999987753
No 357
>2yjg_A Lactate racemase apoprotein; isomerase, nickel-dependent enzyme; 1.80A {Thermoanaerobacterium thermosaccharolyorganism_taxid}
Probab=52.80 E-value=4 Score=33.60 Aligned_cols=45 Identities=13% Similarity=0.028 Sum_probs=29.2
Q ss_pred CCeeEEEEeee-ee-ccCCCCHHHHHHHHHHhcCCCeEEEEEeccCC
Q 045799 120 SSVDVVTLIFM-LS-AVSPKKMPLILQNIKAVLKPDGYILVCDYAIG 164 (231)
Q Consensus 120 ~~fD~ii~~~~-l~-~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~~~ 164 (231)
+++|+||.+.. .. ..+.-+..+.+......+|+||.+++......
T Consensus 275 ~~~DvvI~s~gG~P~d~n~yqa~Kal~~a~~~v~~GG~iIl~a~c~~ 321 (436)
T 2yjg_A 275 KPADIVITSNGGYPLDQNIYQSVKGMTAGEAACKDGGVIIIAAECAD 321 (436)
Confidence 67899997542 21 11112335667778899999999998754443
No 358
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=46.85 E-value=25 Score=27.34 Aligned_cols=76 Identities=18% Similarity=0.240 Sum_probs=44.2
Q ss_pred CCeEEEEcCCCCcchHHHhcCccccccce--eeeeecCCccccc------------CCCC---CCCeeEEEEeeeeeccC
Q 045799 73 PKVVLEVGCGAGNTIFPLVSHSEFREERV--NAFVCNVVNDDLS------------RNVN---PSSVDVVTLIFMLSAVS 135 (231)
Q Consensus 73 ~~~iLdvGcG~G~~~~~l~~~~~~~~~~~--~~~~~D~~~~~~~------------~~~~---~~~fD~ii~~~~l~~~~ 135 (231)
..+|.=||+| .++..++.. +...+. ++.+.|.+..... .... -...|+|+. ++|
T Consensus 33 ~~kI~IIG~G--~mG~slA~~--l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~~~~~~~~aDvVil-----avp 103 (314)
T 3ggo_A 33 MQNVLIVGVG--FMGGSFAKS--LRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVML-----SSP 103 (314)
T ss_dssp CSEEEEESCS--HHHHHHHHH--HHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCTTGGGGGCCSEEEE-----CSC
T ss_pred CCEEEEEeeC--HHHHHHHHH--HHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCCHHHHhhccCCEEEE-----eCC
Confidence 4678888865 455555411 111122 5666676543211 0111 134677776 456
Q ss_pred CCCHHHHHHHHHHhcCCCeEEE
Q 045799 136 PKKMPLILQNIKAVLKPDGYIL 157 (231)
Q Consensus 136 ~~~~~~~l~~~~~~Lk~gG~l~ 157 (231)
+.....+++++...++++.+++
T Consensus 104 ~~~~~~vl~~l~~~l~~~~iv~ 125 (314)
T 3ggo_A 104 VRTFREIAKKLSYILSEDATVT 125 (314)
T ss_dssp GGGHHHHHHHHHHHSCTTCEEE
T ss_pred HHHHHHHHHHHhhccCCCcEEE
Confidence 5667888999999999887654
No 359
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=46.01 E-value=6.5 Score=30.64 Aligned_cols=32 Identities=13% Similarity=-0.020 Sum_probs=23.6
Q ss_pred CCeeEEEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEe
Q 045799 120 SSVDVVTLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCD 160 (231)
Q Consensus 120 ~~fD~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~ 160 (231)
..+|+|+....- ..+..+.++|+++|.+++.-
T Consensus 208 ~g~Dvvid~~g~---------~~~~~~~~~l~~~G~iv~~g 239 (325)
T 3jyn_A 208 KKCPVVYDGVGQ---------DTWLTSLDSVAPRGLVVSFG 239 (325)
T ss_dssp CCEEEEEESSCG---------GGHHHHHTTEEEEEEEEECC
T ss_pred CCceEEEECCCh---------HHHHHHHHHhcCCCEEEEEe
Confidence 478988874421 35677889999999998763
No 360
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=45.85 E-value=7.7 Score=30.21 Aligned_cols=32 Identities=16% Similarity=0.045 Sum_probs=23.6
Q ss_pred CCeeEEEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEe
Q 045799 120 SSVDVVTLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCD 160 (231)
Q Consensus 120 ~~fD~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~ 160 (231)
..+|+++.... ...++.+.++|+++|.+++.-
T Consensus 208 ~~~D~vi~~~g---------~~~~~~~~~~l~~~G~iv~~g 239 (327)
T 1qor_A 208 KKVRVVYDSVG---------RDTWERSLDCLQRRGLMVSFG 239 (327)
T ss_dssp CCEEEEEECSC---------GGGHHHHHHTEEEEEEEEECC
T ss_pred CCceEEEECCc---------hHHHHHHHHHhcCCCEEEEEe
Confidence 46898887543 235677889999999987753
No 361
>2fi0_A Conserved domain protein; structural genomics,streptococcus pneumoniae, PSI, protein S initiative; 2.10A {Streptococcus pneumoniae} SCOP: a.248.1.1
Probab=45.00 E-value=18 Score=21.80 Aligned_cols=18 Identities=11% Similarity=0.220 Sum_probs=16.6
Q ss_pred eCHHHHHHHHHHcCceEE
Q 045799 194 FSEDFLSTLFLEAGFSTV 211 (231)
Q Consensus 194 ~~~~~l~~~l~~~Gf~~~ 211 (231)
.+.+.+.+.|.++||+++
T Consensus 61 id~d~l~~~L~~~g~~~~ 78 (81)
T 2fi0_A 61 TPMDKIVRTLEANGYEVI 78 (81)
T ss_dssp CCHHHHHHHHHHTTCEEE
T ss_pred CCHHHHHHHHHHcCCEee
Confidence 688999999999999986
No 362
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=44.30 E-value=48 Score=26.44 Aligned_cols=85 Identities=15% Similarity=0.155 Sum_probs=46.5
Q ss_pred CCeEEEEcCCCCcchHHHhcCccc--cc---------cceeeeeecCCccccc--CCCCCCCeeEEEEeeeeeccCCCCH
Q 045799 73 PKVVLEVGCGAGNTIFPLVSHSEF--RE---------ERVNAFVCNVVNDDLS--RNVNPSSVDVVTLIFMLSAVSPKKM 139 (231)
Q Consensus 73 ~~~iLdvGcG~G~~~~~l~~~~~~--~~---------~~~~~~~~D~~~~~~~--~~~~~~~fD~ii~~~~l~~~~~~~~ 139 (231)
+.+||.++.+.|.++..++..... +. .+...-+++...-.+. ..-....||+|+.... .+. ...
T Consensus 39 ~~~~~~~~d~~gal~~~~~~~~~~~~~ds~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~lp-k~~--~~l 115 (375)
T 4dcm_A 39 RGPVLILNDAFGALSCALAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVP-KTL--ALL 115 (375)
T ss_dssp CSCEEEECCSSSHHHHHTGGGCCEEEESCHHHHHHHHHHHHHTTCCGGGSEEEETTSCCCSSCSEEEEECC-SCH--HHH
T ss_pred CCCEEEECCCCCHHHHhhccCCceEEEhHHHHHHHHHHHHHHcCCCccceEecccccccccCCCEEEEEcC-CCH--HHH
Confidence 467999999999999888632100 00 0000000000000000 0112467998887332 222 345
Q ss_pred HHHHHHHHHhcCCCeEEEEEe
Q 045799 140 PLILQNIKAVLKPDGYILVCD 160 (231)
Q Consensus 140 ~~~l~~~~~~Lk~gG~l~i~~ 160 (231)
...|..+...|++|+.+++..
T Consensus 116 ~~~L~~l~~~l~~~~~i~~~g 136 (375)
T 4dcm_A 116 EQQLRALRKVVTSDTRIIAGA 136 (375)
T ss_dssp HHHHHHHHTTCCTTSEEEEEE
T ss_pred HHHHHHHHhhCCCCCEEEEEe
Confidence 667888888899999997764
No 363
>1whz_A Hypothetical protein; alpha and beta protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.52A {Thermus thermophilus} SCOP: d.50.3.2
Probab=43.90 E-value=29 Score=20.07 Aligned_cols=20 Identities=10% Similarity=0.012 Sum_probs=17.2
Q ss_pred eCHHHHHHHHHHcCceEEEE
Q 045799 194 FSEDFLSTLFLEAGFSTVDI 213 (231)
Q Consensus 194 ~~~~~l~~~l~~~Gf~~~~~ 213 (231)
.+..++.++|++.||.....
T Consensus 5 ~~~~elik~L~~~G~~~~r~ 24 (70)
T 1whz_A 5 PRPEEVARKLRRLGFVERMA 24 (70)
T ss_dssp CCHHHHHHHHHHTTCEEEEE
T ss_pred CCHHHHHHHHHHCCCEEeCC
Confidence 46789999999999998764
No 364
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=43.60 E-value=11 Score=28.49 Aligned_cols=40 Identities=8% Similarity=0.128 Sum_probs=27.7
Q ss_pred CCCeeEEEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEecc
Q 045799 119 PSSVDVVTLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDYA 162 (231)
Q Consensus 119 ~~~fD~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~~ 162 (231)
..++|+|..-.- .. +.....+..+...|+|||++++-++.
T Consensus 180 ~~~~dlv~ID~D--~Y--~~t~~~le~~~p~l~~GGvIv~DD~~ 219 (257)
T 3tos_A 180 QTVIALAYFDLD--LY--EPTKAVLEAIRPYLTKGSIVAFDELD 219 (257)
T ss_dssp TCCEEEEEECCC--CH--HHHHHHHHHHGGGEEEEEEEEESSTT
T ss_pred CCceEEEEEcCc--cc--chHHHHHHHHHHHhCCCcEEEEcCCC
Confidence 345676666442 11 23456788899999999999998764
No 365
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=43.13 E-value=19 Score=26.03 Aligned_cols=71 Identities=11% Similarity=0.083 Sum_probs=39.6
Q ss_pred CCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccCCCCCCCeeEEEEeeeeeccCCCCHHHHHHHHHHhc
Q 045799 71 GNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSRNVNPSSVDVVTLIFMLSAVSPKKMPLILQNIKAVL 150 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~fD~ii~~~~l~~~~~~~~~~~l~~~~~~L 150 (231)
....+|.=||+| .+...++.. +...+.++...|..+. .-...|+|+.. ++......+++++...+
T Consensus 17 ~~~~~I~iiG~G--~mG~~la~~--l~~~g~~V~~~~~~~~------~~~~aD~vi~a-----v~~~~~~~v~~~l~~~~ 81 (209)
T 2raf_A 17 FQGMEITIFGKG--NMGQAIGHN--FEIAGHEVTYYGSKDQ------ATTLGEIVIMA-----VPYPALAALAKQYATQL 81 (209)
T ss_dssp ---CEEEEECCS--HHHHHHHHH--HHHTTCEEEEECTTCC------CSSCCSEEEEC-----SCHHHHHHHHHHTHHHH
T ss_pred cCCCEEEEECCC--HHHHHHHHH--HHHCCCEEEEEcCCHH------HhccCCEEEEc-----CCcHHHHHHHHHHHHhc
Confidence 345678888865 555555421 1122345666776543 12357888873 33345667788887777
Q ss_pred CCCeEEE
Q 045799 151 KPDGYIL 157 (231)
Q Consensus 151 k~gG~l~ 157 (231)
+ +..++
T Consensus 82 ~-~~~vi 87 (209)
T 2raf_A 82 K-GKIVV 87 (209)
T ss_dssp T-TSEEE
T ss_pred C-CCEEE
Confidence 7 55443
No 366
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=42.97 E-value=27 Score=23.17 Aligned_cols=17 Identities=29% Similarity=0.090 Sum_probs=11.1
Q ss_pred CCeEEEEcCCCCcchHHHh
Q 045799 73 PKVVLEVGCGAGNTIFPLV 91 (231)
Q Consensus 73 ~~~iLdvGcG~G~~~~~l~ 91 (231)
..+|+=+||| .++..++
T Consensus 7 ~~~viIiG~G--~~G~~la 23 (140)
T 3fwz_A 7 CNHALLVGYG--RVGSLLG 23 (140)
T ss_dssp CSCEEEECCS--HHHHHHH
T ss_pred CCCEEEECcC--HHHHHHH
Confidence 4678888885 4555554
No 367
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=42.22 E-value=11 Score=29.64 Aligned_cols=31 Identities=19% Similarity=0.284 Sum_probs=22.9
Q ss_pred CCeeEEEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEE
Q 045799 120 SSVDVVTLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVC 159 (231)
Q Consensus 120 ~~fD~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~ 159 (231)
+.+|+|+.... ...++.+.++|+++|.+++.
T Consensus 224 ~~~d~vi~~~g---------~~~~~~~~~~l~~~G~~v~~ 254 (345)
T 2j3h_A 224 NGIDIYFENVG---------GKMLDAVLVNMNMHGRIAVC 254 (345)
T ss_dssp TCEEEEEESSC---------HHHHHHHHTTEEEEEEEEEC
T ss_pred CCCcEEEECCC---------HHHHHHHHHHHhcCCEEEEE
Confidence 46888876432 13678889999999999875
No 368
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=41.67 E-value=16 Score=28.54 Aligned_cols=37 Identities=8% Similarity=0.021 Sum_probs=28.7
Q ss_pred CCCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCccc
Q 045799 70 NGNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDD 112 (231)
Q Consensus 70 ~~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~ 112 (231)
..++..|||.=||+|..+...... +-+++++|+.+..
T Consensus 250 ~~~~~~VlDpF~GsGtt~~aa~~~------gr~~ig~e~~~~~ 286 (323)
T 1boo_A 250 TEPDDLVVDIFGGSNTTGLVAERE------SRKWISFEMKPEY 286 (323)
T ss_dssp CCTTCEEEETTCTTCHHHHHHHHT------TCEEEEEESCHHH
T ss_pred CCCCCEEEECCCCCCHHHHHHHHc------CCCEEEEeCCHHH
Confidence 467889999999999988776644 3477888887544
No 369
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=41.65 E-value=19 Score=28.22 Aligned_cols=32 Identities=9% Similarity=0.136 Sum_probs=22.8
Q ss_pred CeeEEEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEe
Q 045799 121 SVDVVTLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCD 160 (231)
Q Consensus 121 ~fD~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~ 160 (231)
.+|+|+.... ....++.+.++|+++|.++..-
T Consensus 230 ~~d~vid~~g--------~~~~~~~~~~~l~~~G~~v~~g 261 (339)
T 1rjw_A 230 GVHAAVVTAV--------SKPAFQSAYNSIRRGGACVLVG 261 (339)
T ss_dssp SEEEEEESSC--------CHHHHHHHHHHEEEEEEEEECC
T ss_pred CCCEEEECCC--------CHHHHHHHHHHhhcCCEEEEec
Confidence 5788776432 1246788889999999988753
No 370
>1vpt_A VP39; RNA CAP, poly(A) polymerase, methyltransferase; HET: SAM; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1vp3_A*
Probab=41.25 E-value=95 Score=24.40 Aligned_cols=82 Identities=24% Similarity=0.215 Sum_probs=50.6
Q ss_pred CCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccCCCCCCCeeEEEEeeeeeccCCCCHHHHHHHHHHhcCC
Q 045799 73 PKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSRNVNPSSVDVVTLIFMLSAVSPKKMPLILQNIKAVLKP 152 (231)
Q Consensus 73 ~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~fD~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~ 152 (231)
+..|+=+|++.|.....|.....--.-.++++.+|..+-... +.... ++-+... +++ ...++.++..+..
T Consensus 76 g~~VVYaGsAPG~HI~fL~~lF~~l~~~lkwvLiDp~~f~~~--Le~~~-ni~li~~---ffd----e~~i~~l~~~~~~ 145 (348)
T 1vpt_A 76 GATVVYIGSAPGTHIRYLRDHFYNLGVIIKWMLIDGRHHDPI--LNGLR-DVTLVTR---FVD----EEYLRSIKKQLHP 145 (348)
T ss_dssp TCEEEEESCSSCHHHHHHHHHHHHTTCCCEEEEEESSCCCGG--GTTCT-TEEEEEC---CCC----HHHHHHHHHHHTT
T ss_pred CCeEEEeCcCCcchHHHHHHHhhhcCCceEEEEECCCchhhh--hcCCC-cEEeehh---hcC----HHHHHHHHHHhcC
Confidence 569999999999999888743221113567888887654321 11111 3322222 221 2367778888888
Q ss_pred CeEEEEEeccCC
Q 045799 153 DGYILVCDYAIG 164 (231)
Q Consensus 153 gG~l~i~~~~~~ 164 (231)
..+++|+|....
T Consensus 146 ~~vLfISDIRS~ 157 (348)
T 1vpt_A 146 SKIILISDVASA 157 (348)
T ss_dssp SCEEEEECCCC-
T ss_pred CCEEEEEecccC
Confidence 899999987553
No 371
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=41.19 E-value=9 Score=29.76 Aligned_cols=29 Identities=21% Similarity=0.430 Sum_probs=23.4
Q ss_pred CCHHHHHHHHHHhcCCCeEEEEEeccCCc
Q 045799 137 KKMPLILQNIKAVLKPDGYILVCDYAIGD 165 (231)
Q Consensus 137 ~~~~~~l~~~~~~Lk~gG~l~i~~~~~~~ 165 (231)
+++...|..+.++|+|||.+.|..|..-.
T Consensus 222 ~~l~~~l~~~~~~l~~ggr~~visfhsle 250 (301)
T 1m6y_A 222 ENLKEFLKKAEDLLNPGGRIVVISFHSLE 250 (301)
T ss_dssp HHHHHHHHHGGGGEEEEEEEEEEESSHHH
T ss_pred HHHHHHHHHHHHhhCCCCEEEEEecCcHH
Confidence 45578888999999999999998766543
No 372
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=41.16 E-value=11 Score=28.93 Aligned_cols=72 Identities=11% Similarity=0.116 Sum_probs=41.3
Q ss_pred CCCCeEEEEcC--CCCcchHHHhcCccccccceeeeeecCCcccc--------------------cCCCCCCCeeEEEEe
Q 045799 71 GNPKVVLEVGC--GAGNTIFPLVSHSEFREERVNAFVCNVVNDDL--------------------SRNVNPSSVDVVTLI 128 (231)
Q Consensus 71 ~~~~~iLdvGc--G~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~--------------------~~~~~~~~fD~ii~~ 128 (231)
.++.+||-+|+ |.|..+..++... +.+++.++.+.... ...+ +.+|+|+.
T Consensus 124 ~~g~~vlV~Ga~G~vG~~~~~~a~~~-----Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~--~~~d~vid- 195 (302)
T 1iz0_A 124 RPGEKVLVQAAAGALGTAAVQVARAM-----GLRVLAAASRPEKLALPLALGAEEAATYAEVPERAKAW--GGLDLVLE- 195 (302)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHT-----TCEEEEEESSGGGSHHHHHTTCSEEEEGGGHHHHHHHT--TSEEEEEE-
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC-----CCEEEEEeCCHHHHHHHHhcCCCEEEECCcchhHHHHh--cCceEEEE-
Confidence 67889999997 4455555555221 12333333322111 0011 45788776
Q ss_pred eeeeccCCCCHHHHHHHHHHhcCCCeEEEEE
Q 045799 129 FMLSAVSPKKMPLILQNIKAVLKPDGYILVC 159 (231)
Q Consensus 129 ~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~ 159 (231)
..- ..++.+.++|+++|.++..
T Consensus 196 ~g~---------~~~~~~~~~l~~~G~~v~~ 217 (302)
T 1iz0_A 196 VRG---------KEVEESLGLLAHGGRLVYI 217 (302)
T ss_dssp CSC---------TTHHHHHTTEEEEEEEEEC
T ss_pred CCH---------HHHHHHHHhhccCCEEEEE
Confidence 321 2567788999999998764
No 373
>4gua_A Non-structural polyprotein; viral precursor polyprotein, protease, zinc-binding, hydrola; HET: MES; 2.85A {Sindbis virus}
Probab=41.11 E-value=16 Score=31.11 Aligned_cols=47 Identities=17% Similarity=0.276 Sum_probs=32.9
Q ss_pred CCCeeEEEEee----eeeccCCCC-------HHHHHHHHHHhcCCCeEEEEEeccCCchh
Q 045799 119 PSSVDVVTLIF----MLSAVSPKK-------MPLILQNIKAVLKPDGYILVCDYAIGDFA 167 (231)
Q Consensus 119 ~~~fD~ii~~~----~l~~~~~~~-------~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~ 167 (231)
..+||+|+..- -.||. .+ +.-+-....++|+|||.+++..++..+..
T Consensus 219 ~~ryDlvfvn~~t~yr~HHy--qQCeDHa~~l~ml~~~al~~l~pGGt~v~~~YGyADr~ 276 (670)
T 4gua_A 219 QARYDLVFINIGTKYRNHHF--QQCEDHAATLKTLSRSALNCLNPGGTLVVKSYGYADRN 276 (670)
T ss_dssp CCCEEEEEECCCCCCCSCHH--HHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCSHH
T ss_pred CCcccEEEEecCCCcccchH--HHHHHHHHHHHHHhHHHHhhcCCCceEEEEEeeccccc
Confidence 46999999954 24554 21 12334566789999999999888877654
No 374
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=40.74 E-value=14 Score=28.78 Aligned_cols=32 Identities=28% Similarity=0.206 Sum_probs=23.2
Q ss_pred CCeeEEEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEe
Q 045799 120 SSVDVVTLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCD 160 (231)
Q Consensus 120 ~~fD~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~ 160 (231)
..+|+++....- ..++.+.++|+++|.++..-
T Consensus 213 ~~~d~vi~~~g~---------~~~~~~~~~l~~~G~iv~~g 244 (333)
T 1wly_A 213 KGVDVVYDSIGK---------DTLQKSLDCLRPRGMCAAYG 244 (333)
T ss_dssp CCEEEEEECSCT---------TTHHHHHHTEEEEEEEEECC
T ss_pred CCCeEEEECCcH---------HHHHHHHHhhccCCEEEEEe
Confidence 468888864421 35677889999999987753
No 375
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=40.40 E-value=14 Score=28.46 Aligned_cols=74 Identities=14% Similarity=0.109 Sum_probs=42.4
Q ss_pred CeEEEEc-CCCCcchHHHhcCccccccceeeeeecCCcccccCCCCCCCeeEEEEeeeeeccCCCCHHHHHHHHHHhcCC
Q 045799 74 KVVLEVG-CGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSRNVNPSSVDVVTLIFMLSAVSPKKMPLILQNIKAVLKP 152 (231)
Q Consensus 74 ~~iLdvG-cG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~fD~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~ 152 (231)
.+|.=|| +| .++..++.. +...+.++...|.+...-... .-...|+|+. ++|+.....++.++...+++
T Consensus 22 ~~I~iIGg~G--~mG~~la~~--l~~~G~~V~~~~~~~~~~~~~-~~~~aDvVil-----avp~~~~~~vl~~l~~~l~~ 91 (298)
T 2pv7_A 22 HKIVIVGGYG--KLGGLFARY--LRASGYPISILDREDWAVAES-ILANADVVIV-----SVPINLTLETIERLKPYLTE 91 (298)
T ss_dssp CCEEEETTTS--HHHHHHHHH--HHTTTCCEEEECTTCGGGHHH-HHTTCSEEEE-----CSCGGGHHHHHHHHGGGCCT
T ss_pred CEEEEEcCCC--HHHHHHHHH--HHhCCCeEEEEECCcccCHHH-HhcCCCEEEE-----eCCHHHHHHHHHHHHhhcCC
Confidence 4677787 65 455555411 112234556666553210000 0135688887 55656678889999888988
Q ss_pred CeEEE
Q 045799 153 DGYIL 157 (231)
Q Consensus 153 gG~l~ 157 (231)
+.+++
T Consensus 92 ~~iv~ 96 (298)
T 2pv7_A 92 NMLLA 96 (298)
T ss_dssp TSEEE
T ss_pred CcEEE
Confidence 86544
No 376
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=39.07 E-value=85 Score=20.97 Aligned_cols=19 Identities=21% Similarity=0.380 Sum_probs=13.0
Q ss_pred CCCCeEEEEcCCCCcchHHHh
Q 045799 71 GNPKVVLEVGCGAGNTIFPLV 91 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~ 91 (231)
.++.+|+=+||| .++..++
T Consensus 17 ~~~~~v~IiG~G--~iG~~la 35 (155)
T 2g1u_A 17 QKSKYIVIFGCG--RLGSLIA 35 (155)
T ss_dssp CCCCEEEEECCS--HHHHHHH
T ss_pred cCCCcEEEECCC--HHHHHHH
Confidence 567889999874 5555444
No 377
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=38.34 E-value=12 Score=29.60 Aligned_cols=34 Identities=12% Similarity=0.184 Sum_probs=21.5
Q ss_pred CCeeEEEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEE
Q 045799 120 SSVDVVTLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVC 159 (231)
Q Consensus 120 ~~fD~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~ 159 (231)
+.+|+|+....-. + ...++.+.++|+++|.++..
T Consensus 242 ~~~D~vid~~g~~--~----~~~~~~~~~~l~~~G~iv~~ 275 (360)
T 1piw_A 242 DTFDLIVVCASSL--T----DIDFNIMPKAMKVGGRIVSI 275 (360)
T ss_dssp SCEEEEEECCSCS--T----TCCTTTGGGGEEEEEEEEEC
T ss_pred cCCCEEEECCCCC--c----HHHHHHHHHHhcCCCEEEEe
Confidence 4689888754320 0 01234567889999998765
No 378
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=37.54 E-value=14 Score=29.20 Aligned_cols=32 Identities=13% Similarity=0.055 Sum_probs=22.7
Q ss_pred CCeeEEEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEe
Q 045799 120 SSVDVVTLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCD 160 (231)
Q Consensus 120 ~~fD~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~ 160 (231)
..+|+++....- ..+..+.++|+++|.+++.-
T Consensus 230 ~~~d~vi~~~G~---------~~~~~~~~~l~~~G~iv~~G 261 (354)
T 2j8z_A 230 AGVNLILDCIGG---------SYWEKNVNCLALDGRWVLYG 261 (354)
T ss_dssp SCEEEEEESSCG---------GGHHHHHHHEEEEEEEEECC
T ss_pred CCceEEEECCCc---------hHHHHHHHhccCCCEEEEEe
Confidence 468888765431 14667788999999998753
No 379
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=37.08 E-value=1e+02 Score=21.44 Aligned_cols=21 Identities=38% Similarity=0.490 Sum_probs=18.3
Q ss_pred CCCCeEEEEcCCCCcchHHHh
Q 045799 71 GNPKVVLEVGCGAGNTIFPLV 91 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~ 91 (231)
.-..-|||+|-|+|+.--+|.
T Consensus 39 ~~~GpVlElGLGNGRTydHLR 59 (174)
T 3iht_A 39 GLSGPVYELGLGNGRTYHHLR 59 (174)
T ss_dssp TCCSCEEEECCTTCHHHHHHH
T ss_pred CCCCceEEecCCCChhHHHHH
Confidence 445789999999999998888
No 380
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=37.03 E-value=11 Score=29.71 Aligned_cols=32 Identities=19% Similarity=0.119 Sum_probs=22.8
Q ss_pred CCeeEEEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEE
Q 045799 120 SSVDVVTLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVC 159 (231)
Q Consensus 120 ~~fD~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~ 159 (231)
+.+|+|+....- ...++.+.++|+++|.+++.
T Consensus 239 ~~~d~vi~~~g~--------~~~~~~~~~~l~~~G~iv~~ 270 (347)
T 1jvb_A 239 KGVDAVIDLNNS--------EKTLSVYPKALAKQGKYVMV 270 (347)
T ss_dssp SCEEEEEESCCC--------HHHHTTGGGGEEEEEEEEEC
T ss_pred CCceEEEECCCC--------HHHHHHHHHHHhcCCEEEEE
Confidence 468888764421 23567778899999998775
No 381
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=36.16 E-value=29 Score=27.05 Aligned_cols=21 Identities=24% Similarity=0.395 Sum_probs=16.6
Q ss_pred HHHHHHHHHhcCCCeEEEEEe
Q 045799 140 PLILQNIKAVLKPDGYILVCD 160 (231)
Q Consensus 140 ~~~l~~~~~~Lk~gG~l~i~~ 160 (231)
...+....++|+++|.+++.-
T Consensus 243 ~~~~~~~~~~l~~~G~~v~~g 263 (348)
T 4eez_A 243 RIAFEQAVASLKPMGKMVAVA 263 (348)
T ss_dssp HHHHHHHHHTEEEEEEEEECC
T ss_pred cchhheeheeecCCceEEEEe
Confidence 446778889999999987753
No 382
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=33.21 E-value=13 Score=29.39 Aligned_cols=32 Identities=19% Similarity=0.243 Sum_probs=22.9
Q ss_pred CCeeEEEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEe
Q 045799 120 SSVDVVTLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCD 160 (231)
Q Consensus 120 ~~fD~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~ 160 (231)
+.+|+|+....- ..+..+.+.|+++|.+++.-
T Consensus 234 ~g~Dvvid~~g~---------~~~~~~~~~l~~~G~iv~~g 265 (353)
T 4dup_A 234 QGVDIILDMIGA---------AYFERNIASLAKDGCLSIIA 265 (353)
T ss_dssp SCEEEEEESCCG---------GGHHHHHHTEEEEEEEEECC
T ss_pred CCceEEEECCCH---------HHHHHHHHHhccCCEEEEEE
Confidence 468888874421 15677888999999988753
No 383
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=32.16 E-value=23 Score=29.08 Aligned_cols=75 Identities=17% Similarity=0.192 Sum_probs=42.5
Q ss_pred HHHHHHHHHhcCCCeEEEEEeccCCchhhh-------hhhc--cccccccceEEeCCCeEEEeeCHHHHHHHHHHcCceE
Q 045799 140 PLILQNIKAVLKPDGYILVCDYAIGDFAQV-------KLLD--RNQMIGDSFYVRGDGTCSFYFSEDFLSTLFLEAGFST 210 (231)
Q Consensus 140 ~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~-------~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~ 210 (231)
..+++.+.+.|+ +|.+++.|++.....+. .+.. ........+...+..-.....+...+.+..+++|+++
T Consensus 279 ~~~~~~la~~l~-~G~~L~IDYG~~~~eyy~p~r~~GTL~~y~~h~~~~dpl~~pG~~DLTAhVdF~aL~~aa~~~G~~~ 357 (432)
T 4f3n_A 279 VAFVRTVCAMLA-RGAAFFIDYGFPSHEYYHRQRAQGTLMCHYRHRAHGDPFVYPGLQDITAHVEFSAIHEAGVGAGADL 357 (432)
T ss_dssp HHHHHHHHHHEE-EEEEEEEEEEECHHHHTCTTCTTCSCEEESSSCEESCTTSSTTSSEEECCEEHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHhHhc-CCEEEEEeCCCcchhcccCCCCCCChHHHHcCCCCCCcccCCCcccccccccHHHHHHHHHHCCceE
Confidence 467888888886 78888888886543210 0000 0000111111122222334577888999999999988
Q ss_pred EEEEE
Q 045799 211 VDINI 215 (231)
Q Consensus 211 ~~~~~ 215 (231)
.....
T Consensus 358 ~g~~~ 362 (432)
T 4f3n_A 358 LGYTS 362 (432)
T ss_dssp EEEEE
T ss_pred ecccc
Confidence 76544
No 384
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=31.34 E-value=48 Score=25.82 Aligned_cols=31 Identities=16% Similarity=0.080 Sum_probs=22.0
Q ss_pred CeeEEEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEE
Q 045799 121 SVDVVTLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVC 159 (231)
Q Consensus 121 ~fD~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~ 159 (231)
.+|+|+.... -...++.+.++|+++|.++..
T Consensus 231 g~D~vid~~g--------~~~~~~~~~~~l~~~G~iv~~ 261 (343)
T 2dq4_A 231 GVEVLLEFSG--------NEAAIHQGLMALIPGGEARIL 261 (343)
T ss_dssp CEEEEEECSC--------CHHHHHHHHHHEEEEEEEEEC
T ss_pred CCCEEEECCC--------CHHHHHHHHHHHhcCCEEEEE
Confidence 5777765332 124678888999999998775
No 385
>3g2e_A OORC subunit of 2-oxoglutarate:acceptor oxidoredu; structural genomics, PSI-2, protein structure initiative; 2.00A {Campylobacter jejuni}
Probab=30.63 E-value=71 Score=22.77 Aligned_cols=32 Identities=19% Similarity=0.142 Sum_probs=22.4
Q ss_pred CCeeEEEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEEec
Q 045799 120 SSVDVVTLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVCDY 161 (231)
Q Consensus 120 ~~fD~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~~~ 161 (231)
+..|++++.+ +. .+.+....|+|||.+++.+.
T Consensus 69 g~~D~lv~~d---------~~-~~~~~~~~l~~gg~vi~ns~ 100 (194)
T 3g2e_A 69 GEVDFMLSTA---------DK-GYKGFRGGVKEGGIIVVEPN 100 (194)
T ss_dssp TCEEEEEECC---------HH-HHHHHGGGEEEEEEEEECTT
T ss_pred CCCCEEEEcC---------HH-HHHHHHhccCCCeEEEEeCC
Confidence 4799999844 22 23455778999999987643
No 386
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=29.80 E-value=35 Score=26.42 Aligned_cols=32 Identities=9% Similarity=-0.014 Sum_probs=23.2
Q ss_pred CCCeeEEEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEE
Q 045799 119 PSSVDVVTLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVC 159 (231)
Q Consensus 119 ~~~fD~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~ 159 (231)
.+.+|+|+... .. ..+..+.++|+++|.+++.
T Consensus 215 ~~~~d~vid~~-------g~--~~~~~~~~~l~~~G~iv~~ 246 (330)
T 1tt7_A 215 KQQWQGAVDPV-------GG--KQLASLLSKIQYGGSVAVS 246 (330)
T ss_dssp CCCEEEEEESC-------CT--HHHHHHHTTEEEEEEEEEC
T ss_pred cCCccEEEECC-------cH--HHHHHHHHhhcCCCEEEEE
Confidence 34688877633 22 3678888999999999875
No 387
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=28.20 E-value=31 Score=26.94 Aligned_cols=35 Identities=17% Similarity=0.171 Sum_probs=27.3
Q ss_pred CCCCCeEEEEcCCCCcchHHHhcCccccccceeeeeecCCc
Q 045799 70 NGNPKVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVN 110 (231)
Q Consensus 70 ~~~~~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~ 110 (231)
..++..|||.=||+|..+...... +-.++++|+.+
T Consensus 240 ~~~~~~vlDpF~GsGtt~~aa~~~------~r~~ig~e~~~ 274 (319)
T 1eg2_A 240 SHPGSTVLDFFAGSGVTARVAIQE------GRNSICTDAAP 274 (319)
T ss_dssp SCTTCEEEETTCTTCHHHHHHHHH------TCEEEEEESST
T ss_pred CCCCCEEEecCCCCCHHHHHHHHc------CCcEEEEECCc
Confidence 367889999999999988766543 34678888874
No 388
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=27.95 E-value=35 Score=26.09 Aligned_cols=76 Identities=16% Similarity=0.240 Sum_probs=41.6
Q ss_pred CeEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccC----------CCC--CCCeeEEEEeeeeeccCC-CCHH
Q 045799 74 KVVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSR----------NVN--PSSVDVVTLIFMLSAVSP-KKMP 140 (231)
Q Consensus 74 ~~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~----------~~~--~~~fD~ii~~~~l~~~~~-~~~~ 140 (231)
.+|.=||+| .+...++.. +...+.++...|.++..... ... -. .|+|+. ++|. ...+
T Consensus 16 ~~I~vIG~G--~mG~~~A~~--l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~-aDvvi~-----~vp~~~~~~ 85 (296)
T 3qha_A 16 LKLGYIGLG--NMGAPMATR--MTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVAA-ADLIHI-----TVLDDAQVR 85 (296)
T ss_dssp CCEEEECCS--TTHHHHHHH--HTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHHTT-SSEEEE-----CCSSHHHHH
T ss_pred CeEEEECcC--HHHHHHHHH--HHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHHh-CCEEEE-----ECCChHHHH
Confidence 467778775 455555421 11223456667766543211 000 12 577765 4542 2456
Q ss_pred HHHHHHHHhcCCCeEEEEE
Q 045799 141 LILQNIKAVLKPDGYILVC 159 (231)
Q Consensus 141 ~~l~~~~~~Lk~gG~l~i~ 159 (231)
.++..+...+++|..++-.
T Consensus 86 ~v~~~l~~~l~~g~ivv~~ 104 (296)
T 3qha_A 86 EVVGELAGHAKPGTVIAIH 104 (296)
T ss_dssp HHHHHHHTTCCTTCEEEEC
T ss_pred HHHHHHHHhcCCCCEEEEe
Confidence 6788888888888766543
No 389
>2c71_A Glycoside hydrolase, family 11\:clostridium cellulosome enzyme, dockerin type I\:polysaccharide...; acetyl-xylan, esterases, metal-ION; 1.05A {Clostridium thermocellum} SCOP: c.6.2.3 PDB: 2c79_A
Probab=27.76 E-value=1.7e+02 Score=21.07 Aligned_cols=24 Identities=13% Similarity=0.086 Sum_probs=18.3
Q ss_pred CCHHHHHHHHHHhcCCCeEEEEEe
Q 045799 137 KKMPLILQNIKAVLKPDGYILVCD 160 (231)
Q Consensus 137 ~~~~~~l~~~~~~Lk~gG~l~i~~ 160 (231)
.....+.+.+.+.+++|.++++.+
T Consensus 133 ~~~~~i~~~v~~~~~~g~IiL~Hd 156 (216)
T 2c71_A 133 TTAEQRAAAVINGVRDGTIILLHD 156 (216)
T ss_dssp SCHHHHHHHHHHHCCTTBEEEEES
T ss_pred CCHHHHHHHHHhcCCCCcEEEEEC
Confidence 356778888888899988776654
No 390
>2jvf_A De novo protein M7; tetrapeptide fragment-based protein design, artificial fold; NMR {Unidentified} SCOP: k.41.1.1
Probab=27.60 E-value=96 Score=18.08 Aligned_cols=61 Identities=13% Similarity=0.258 Sum_probs=38.6
Q ss_pred CCHHHHHHHHHHhcC-CCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeEEEeeCHHHHHHHHHHcCceEEEEEE
Q 045799 137 KKMPLILQNIKAVLK-PDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYFSEDFLSTLFLEAGFSTVDINI 215 (231)
Q Consensus 137 ~~~~~~l~~~~~~Lk-~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~~ 215 (231)
.++.+.++++-..|. .|..-+-.+.+..+..+... -.+-+.+++.+.|+..+.+.+
T Consensus 29 keleralqelekalaragarnvqitisaendeqake-----------------------lleliarllqklgykdinvrv 85 (96)
T 2jvf_A 29 KELERALQELEKALARAGARNVQITISAENDEQAKE-----------------------LLELIARLLQKLGYKDINVRV 85 (96)
T ss_dssp SHHHHHHHHHHHHHHHHTCSEEEEEEECSSHHHHHH-----------------------HHHHHHHHHHHHTCSEEEEEE
T ss_pred HHHHHHHHHHHHHHHhccccceEEEEEecChHHHHH-----------------------HHHHHHHHHHHhCCCceEEEE
Confidence 678888888887774 45444444444444332211 124577889999999998877
Q ss_pred Eeeee
Q 045799 216 HLKQI 220 (231)
Q Consensus 216 ~~~~~ 220 (231)
.+..+
T Consensus 86 ngtev 90 (96)
T 2jvf_A 86 NGTEV 90 (96)
T ss_dssp ETTEE
T ss_pred cCEEE
Confidence 65443
No 391
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=27.43 E-value=23 Score=27.45 Aligned_cols=31 Identities=10% Similarity=0.045 Sum_probs=21.8
Q ss_pred CCeeEEEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEE
Q 045799 120 SSVDVVTLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVC 159 (231)
Q Consensus 120 ~~fD~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~ 159 (231)
+.+|+|+... . . ..+..+.++|+++|.+++.
T Consensus 215 ~~~d~vid~~-----g--~--~~~~~~~~~l~~~G~~v~~ 245 (328)
T 1xa0_A 215 QRWAAAVDPV-----G--G--RTLATVLSRMRYGGAVAVS 245 (328)
T ss_dssp CCEEEEEECS-----T--T--TTHHHHHHTEEEEEEEEEC
T ss_pred CcccEEEECC-----c--H--HHHHHHHHhhccCCEEEEE
Confidence 4688877633 1 1 1467788899999999875
No 392
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=26.68 E-value=58 Score=26.05 Aligned_cols=82 Identities=18% Similarity=0.219 Sum_probs=46.6
Q ss_pred CCeEEEEcCCCCcchHHHhcCcccc---ccc-----eeeeeecCCcccccCCCCCCCeeEEEEeeeeeccCC----CCHH
Q 045799 73 PKVVLEVGCGAGNTIFPLVSHSEFR---EER-----VNAFVCNVVNDDLSRNVNPSSVDVVTLIFMLSAVSP----KKMP 140 (231)
Q Consensus 73 ~~~iLdvGcG~G~~~~~l~~~~~~~---~~~-----~~~~~~D~~~~~~~~~~~~~~fD~ii~~~~l~~~~~----~~~~ 140 (231)
+.+||.++-+-|.++..+....... ... .+.-+++... ..........||+|+. .+|. ....
T Consensus 46 ~~~~l~~n~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~d~v~~-----~~Pk~k~~~~~~ 119 (381)
T 3dmg_A 46 GERALDLNPGVGWGSLPLEGRMAVERLETSRAAFRCLTASGLQARL-ALPWEAAAGAYDLVVL-----ALPAGRGTAYVQ 119 (381)
T ss_dssp SSEEEESSCTTSTTTGGGBTTBEEEEEECBHHHHHHHHHTTCCCEE-CCGGGSCTTCEEEEEE-----ECCGGGCHHHHH
T ss_pred CCcEEEecCCCCccccccCCCCceEEEeCcHHHHHHHHHcCCCccc-cCCccCCcCCCCEEEE-----ECCcchhHHHHH
Confidence 4689999999998777765221100 000 0000111110 0000123467999887 4442 1246
Q ss_pred HHHHHHHHhcCCCeEEEEEe
Q 045799 141 LILQNIKAVLKPDGYILVCD 160 (231)
Q Consensus 141 ~~l~~~~~~Lk~gG~l~i~~ 160 (231)
..|..+.+.|++||.+++.-
T Consensus 120 ~~l~~~~~~l~~g~~i~~~g 139 (381)
T 3dmg_A 120 ASLVAAARALRMGGRLYLAG 139 (381)
T ss_dssp HHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHhCCCCCEEEEEE
Confidence 77888999999999998763
No 393
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=26.53 E-value=34 Score=26.78 Aligned_cols=20 Identities=15% Similarity=0.164 Sum_probs=17.5
Q ss_pred CCCeEEEEcCCCCcchHHHh
Q 045799 72 NPKVVLEVGCGAGNTIFPLV 91 (231)
Q Consensus 72 ~~~~iLdvGcG~G~~~~~l~ 91 (231)
.+.++||+-||.|.++..+.
T Consensus 10 ~~~~~~dLFaG~Gg~~~g~~ 29 (327)
T 2c7p_A 10 TGLRFIDLFAGLGGFRLALE 29 (327)
T ss_dssp TTCEEEEETCTTTHHHHHHH
T ss_pred CCCcEEEECCCcCHHHHHHH
Confidence 35789999999999998886
No 394
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=25.33 E-value=1.3e+02 Score=24.58 Aligned_cols=19 Identities=32% Similarity=0.566 Sum_probs=16.9
Q ss_pred CCeEEEEcCCCCcchHHHh
Q 045799 73 PKVVLEVGCGAGNTIFPLV 91 (231)
Q Consensus 73 ~~~iLdvGcG~G~~~~~l~ 91 (231)
...|+|+|.|+|.++.-++
T Consensus 138 ~~~ivE~GaG~GtLa~DiL 156 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLL 156 (432)
T ss_dssp CCEEEEESCTTSHHHHHHH
T ss_pred CCeEEEeCCCccHHHHHHH
Confidence 4799999999999888877
No 395
>1ny1_A Probable polysaccharide deacetylase PDAA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.6.2.3 PDB: 1w17_A 1w1b_1 1w1a_1
Probab=25.19 E-value=1.4e+02 Score=21.95 Aligned_cols=49 Identities=12% Similarity=0.069 Sum_probs=31.3
Q ss_pred CHHHHHHHHHHhcCCCeEEEEEeccCCchhhhhhhccccccccceEEeCCCeEEEeeCHHHHHHHHHHcCceEEEE
Q 045799 138 KMPLILQNIKAVLKPDGYILVCDYAIGDFAQVKLLDRNQMIGDSFYVRGDGTCSFYFSEDFLSTLFLEAGFSTVDI 213 (231)
Q Consensus 138 ~~~~~l~~~~~~Lk~gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~ 213 (231)
....+++++.+.+++|+++++.+...... -....+...|++.||+.+.+
T Consensus 178 ~~~~~~~~v~~~~~~g~Iil~Hd~~~~t~---------------------------~aL~~ii~~l~~~Gy~fvtl 226 (240)
T 1ny1_A 178 GKKYAYDHMIKQAHPGAIYLLHTVSRDNA---------------------------EALDDAITDLKKQGYTFKSI 226 (240)
T ss_dssp CHHHHHHHHHHTCCTTEEEEECSCSTTHH---------------------------HHHHHHHHHHHHHTCEEECH
T ss_pred CHHHHHHHHHhCCCCCeEEEEcCCChhHH---------------------------HHHHHHHHHHHHCCCEEEEh
Confidence 45678888888889988776654211000 12356777778888887654
No 396
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=24.77 E-value=71 Score=20.84 Aligned_cols=17 Identities=18% Similarity=0.112 Sum_probs=11.5
Q ss_pred CCeEEEEcCCCCcchHHHh
Q 045799 73 PKVVLEVGCGAGNTIFPLV 91 (231)
Q Consensus 73 ~~~iLdvGcG~G~~~~~l~ 91 (231)
..+|+=+||| .++..++
T Consensus 6 ~~~v~I~G~G--~iG~~la 22 (141)
T 3llv_A 6 RYEYIVIGSE--AAGVGLV 22 (141)
T ss_dssp CCSEEEECCS--HHHHHHH
T ss_pred CCEEEEECCC--HHHHHHH
Confidence 3578888884 4666555
No 397
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=23.89 E-value=2.2e+02 Score=21.64 Aligned_cols=76 Identities=14% Similarity=0.100 Sum_probs=34.2
Q ss_pred eEEEEcCCCCcchHHHhcCccccccceeeeeecCCcccccCC----------C--CCCCeeEEEEeeeeeccCCC-CHHH
Q 045799 75 VVLEVGCGAGNTIFPLVSHSEFREERVNAFVCNVVNDDLSRN----------V--NPSSVDVVTLIFMLSAVSPK-KMPL 141 (231)
Q Consensus 75 ~iLdvGcG~G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~~~----------~--~~~~fD~ii~~~~l~~~~~~-~~~~ 141 (231)
+|==||. |.+...++.+ ....+.++.+.|.++...+.- . .-..-|+|++ +++.+ ....
T Consensus 7 kIgfIGL--G~MG~~mA~~--L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~~dvvi~-----~l~~~~~~~~ 77 (297)
T 4gbj_A 7 KIAFLGL--GNLGTPIAEI--LLEAGYELVVWNRTASKAEPLTKLGATVVENAIDAITPGGIVFS-----VLADDAAVEE 77 (297)
T ss_dssp EEEEECC--STTHHHHHHH--HHHTTCEEEEC-------CTTTTTTCEECSSGGGGCCTTCEEEE-----CCSSHHHHHH
T ss_pred cEEEEec--HHHHHHHHHH--HHHCCCeEEEEeCCHHHHHHHHHcCCeEeCCHHHHHhcCCceee-----eccchhhHHH
Confidence 4444554 5677777622 222344566667665433210 0 0134577665 34321 1122
Q ss_pred -HHHHHHHhcCCCeEEEEE
Q 045799 142 -ILQNIKAVLKPDGYILVC 159 (231)
Q Consensus 142 -~l~~~~~~Lk~gG~l~i~ 159 (231)
+...+...+++|++++-.
T Consensus 78 v~~~~~~~~~~~~~iiid~ 96 (297)
T 4gbj_A 78 LFSMELVEKLGKDGVHVSM 96 (297)
T ss_dssp HSCHHHHHHHCTTCEEEEC
T ss_pred HHHHHHHhhcCCCeEEEEC
Confidence 234577788888876543
No 398
>1jg5_A GTP cyclohydrolase I feedback regulatory protein; alpha/beta structure, beta sheet, protein binding; 2.60A {Rattus norvegicus} SCOP: d.205.1.1 PDB: 1is8_K* 1is7_K* 1wpl_K*
Probab=23.87 E-value=1.2e+02 Score=18.12 Aligned_cols=27 Identities=7% Similarity=0.020 Sum_probs=22.4
Q ss_pred eCHHHHHHHHHHcCceEEEEEEEeeee
Q 045799 194 FSEDFLSTLFLEAGFSTVDINIHLKQI 220 (231)
Q Consensus 194 ~~~~~l~~~l~~~Gf~~~~~~~~~~~~ 220 (231)
-++.-+.+.|+..||.++.+.-+++-+
T Consensus 50 dpPr~VLnKLE~~G~rVvsmtGvgqtl 76 (83)
T 1jg5_A 50 DPPRIVLDKLECRGFRVLSMTGVGQTL 76 (83)
T ss_dssp SCHHHHHHHHHHTTCEEEEEEEETTEE
T ss_pred CChHHHHHHHhccCeEEEEEecCCceE
Confidence 467789999999999999998776544
No 399
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=23.38 E-value=89 Score=23.59 Aligned_cols=34 Identities=15% Similarity=0.460 Sum_probs=23.6
Q ss_pred CeeEEEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEE
Q 045799 121 SVDVVTLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVC 159 (231)
Q Consensus 121 ~fD~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~ 159 (231)
..|+|+.. ++......+++.+...++++..++..
T Consensus 74 ~~d~vi~~-----v~~~~~~~v~~~l~~~l~~~~~iv~~ 107 (316)
T 2ew2_A 74 QVDLIIAL-----TKAQQLDAMFKAIQPMITEKTYVLCL 107 (316)
T ss_dssp CCSEEEEC-----SCHHHHHHHHHHHGGGCCTTCEEEEC
T ss_pred CCCEEEEE-----eccccHHHHHHHHHHhcCCCCEEEEe
Confidence 67888773 34345677888888888887766544
No 400
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=22.87 E-value=33 Score=26.34 Aligned_cols=74 Identities=16% Similarity=0.132 Sum_probs=40.7
Q ss_pred CCCCCeEEEEcCCC-CcchHHHhcCccccccceeeeeecCCccccc--------------CCCCCCCeeEEEEeeeeecc
Q 045799 70 NGNPKVVLEVGCGA-GNTIFPLVSHSEFREERVNAFVCNVVNDDLS--------------RNVNPSSVDVVTLIFMLSAV 134 (231)
Q Consensus 70 ~~~~~~iLdvGcG~-G~~~~~l~~~~~~~~~~~~~~~~D~~~~~~~--------------~~~~~~~fD~ii~~~~l~~~ 134 (231)
..++.+||=+|+|. |..+..++... +.+++.++ ++...+ ..+ .+.+|+|+....-.
T Consensus 140 ~~~g~~VlV~GaG~vG~~a~qlak~~-----Ga~Vi~~~-~~~~~~~~~~lGa~~v~~d~~~v-~~g~Dvv~d~~g~~-- 210 (315)
T 3goh_A 140 LTKQREVLIVGFGAVNNLLTQMLNNA-----GYVVDLVS-ASLSQALAAKRGVRHLYREPSQV-TQKYFAIFDAVNSQ-- 210 (315)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHH-----TCEEEEEC-SSCCHHHHHHHTEEEEESSGGGC-CSCEEEEECC------
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc-----CCEEEEEE-ChhhHHHHHHcCCCEEEcCHHHh-CCCccEEEECCCch--
Confidence 47889999999943 55555555221 22344444 322211 011 45688877643211
Q ss_pred CCCCHHHHHHHHHHhcCCCeEEEEE
Q 045799 135 SPKKMPLILQNIKAVLKPDGYILVC 159 (231)
Q Consensus 135 ~~~~~~~~l~~~~~~Lk~gG~l~i~ 159 (231)
.+..+.++|+++|.++..
T Consensus 211 -------~~~~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 211 -------NAAALVPSLKANGHIICI 228 (315)
T ss_dssp ----------TTGGGEEEEEEEEEE
T ss_pred -------hHHHHHHHhcCCCEEEEE
Confidence 124567899999999876
No 401
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=22.51 E-value=1.1e+02 Score=21.94 Aligned_cols=58 Identities=28% Similarity=0.328 Sum_probs=32.7
Q ss_pred CCCCeEEEEcCCCCcchHHHh----cC-----------c---cccccce-eeeeecCCcccccCCCCCCCeeEEEEeeee
Q 045799 71 GNPKVVLEVGCGAGNTIFPLV----SH-----------S---EFREERV-NAFVCNVVNDDLSRNVNPSSVDVVTLIFML 131 (231)
Q Consensus 71 ~~~~~iLdvGcG~G~~~~~l~----~~-----------~---~~~~~~~-~~~~~D~~~~~~~~~~~~~~fD~ii~~~~l 131 (231)
..+++||=.|+ +|.....++ .. . .....++ .++.+|++ ..+...+ +..|+||.....
T Consensus 19 l~~~~ilVtGa-tG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~-~~~~~~~--~~~D~vi~~ag~ 94 (236)
T 3e8x_A 19 FQGMRVLVVGA-NGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVANLE-EDFSHAF--ASIDAVVFAAGS 94 (236)
T ss_dssp --CCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHTTCSEEEECCTT-SCCGGGG--TTCSEEEECCCC
T ss_pred cCCCeEEEECC-CChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhCCCceEEEcccH-HHHHHHH--cCCCEEEECCCC
Confidence 34678887775 566666655 11 0 0011245 77788887 4443333 368999987764
Q ss_pred e
Q 045799 132 S 132 (231)
Q Consensus 132 ~ 132 (231)
.
T Consensus 95 ~ 95 (236)
T 3e8x_A 95 G 95 (236)
T ss_dssp C
T ss_pred C
Confidence 4
No 402
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=22.40 E-value=93 Score=24.52 Aligned_cols=32 Identities=6% Similarity=-0.067 Sum_probs=21.2
Q ss_pred CCeeEEEEeeeeeccCCCCHHHHHHHHHHhc-CCCeEEEEE
Q 045799 120 SSVDVVTLIFMLSAVSPKKMPLILQNIKAVL-KPDGYILVC 159 (231)
Q Consensus 120 ~~fD~ii~~~~l~~~~~~~~~~~l~~~~~~L-k~gG~l~i~ 159 (231)
+.+|+|+..-. . ...+..+.++| +++|.++..
T Consensus 230 g~~d~v~d~~g-------~-~~~~~~~~~~l~~~~G~iv~~ 262 (371)
T 3gqv_A 230 NNLRYALDCIT-------N-VESTTFCFAAIGRAGGHYVSL 262 (371)
T ss_dssp TCCCEEEESSC-------S-HHHHHHHHHHSCTTCEEEEES
T ss_pred CCccEEEECCC-------c-hHHHHHHHHHhhcCCCEEEEE
Confidence 34787776321 1 24567778888 699999775
No 403
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=22.18 E-value=52 Score=24.62 Aligned_cols=33 Identities=12% Similarity=0.245 Sum_probs=22.7
Q ss_pred CCeeEEEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEE
Q 045799 120 SSVDVVTLIFMLSAVSPKKMPLILQNIKAVLKPDGYIL 157 (231)
Q Consensus 120 ~~fD~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~ 157 (231)
...|+|+. .+|+.....++..+...++++..++
T Consensus 56 ~~~D~vi~-----av~~~~~~~~~~~l~~~~~~~~~vv 88 (279)
T 2f1k_A 56 QTAKIIFL-----CTPIQLILPTLEKLIPHLSPTAIVT 88 (279)
T ss_dssp TTCSEEEE-----CSCHHHHHHHHHHHGGGSCTTCEEE
T ss_pred CCCCEEEE-----ECCHHHHHHHHHHHHhhCCCCCEEE
Confidence 45788777 4444455678888888888877553
No 404
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=21.75 E-value=42 Score=26.42 Aligned_cols=18 Identities=33% Similarity=0.333 Sum_probs=16.2
Q ss_pred CeEEEEcCCCCcchHHHh
Q 045799 74 KVVLEVGCGAGNTIFPLV 91 (231)
Q Consensus 74 ~~iLdvGcG~G~~~~~l~ 91 (231)
.++||+-||.|.++..+.
T Consensus 3 ~~v~dLFaG~Gg~~~g~~ 20 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALR 20 (343)
T ss_dssp EEEEEETCTTCHHHHHHH
T ss_pred CeEEEeCcCccHHHHHHH
Confidence 589999999999998876
No 405
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=21.39 E-value=50 Score=24.52 Aligned_cols=34 Identities=9% Similarity=0.156 Sum_probs=21.9
Q ss_pred CeeEEEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEEEE
Q 045799 121 SVDVVTLIFMLSAVSPKKMPLILQNIKAVLKPDGYILVC 159 (231)
Q Consensus 121 ~fD~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~i~ 159 (231)
..|+|+. ++++.....++..+...++++..++-.
T Consensus 68 ~~Dvvi~-----av~~~~~~~v~~~l~~~~~~~~ivv~~ 101 (266)
T 3d1l_A 68 YAKLYIV-----SLKDSAFAELLQGIVEGKREEALMVHT 101 (266)
T ss_dssp CCSEEEE-----CCCHHHHHHHHHHHHTTCCTTCEEEEC
T ss_pred CCCEEEE-----ecCHHHHHHHHHHHHhhcCCCcEEEEC
Confidence 5687777 344344566777777778777665443
No 406
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=20.47 E-value=49 Score=24.98 Aligned_cols=32 Identities=25% Similarity=0.441 Sum_probs=21.7
Q ss_pred CeeEEEEeeeeeccCCCCHHHHHHHHHHhcCCCeEEE
Q 045799 121 SVDVVTLIFMLSAVSPKKMPLILQNIKAVLKPDGYIL 157 (231)
Q Consensus 121 ~fD~ii~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l~ 157 (231)
..|+|+. .+++.....++..+...++++..++
T Consensus 67 ~aDvVi~-----av~~~~~~~v~~~l~~~l~~~~ivv 98 (286)
T 3c24_A 67 EADVVVL-----ALPDNIIEKVAEDIVPRVRPGTIVL 98 (286)
T ss_dssp TCSEEEE-----CSCHHHHHHHHHHHGGGSCTTCEEE
T ss_pred CCCEEEE-----cCCchHHHHHHHHHHHhCCCCCEEE
Confidence 5688776 4444446777888877788776554
No 407
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=20.33 E-value=1.1e+02 Score=19.54 Aligned_cols=50 Identities=12% Similarity=0.241 Sum_probs=24.6
Q ss_pred EEEcCCCCcchHHHhcC---ccccccce--eeeeecCCcccccCCCCCCCeeEEEEeee
Q 045799 77 LEVGCGAGNTIFPLVSH---SEFREERV--NAFVCNVVNDDLSRNVNPSSVDVVTLIFM 130 (231)
Q Consensus 77 LdvGcG~G~~~~~l~~~---~~~~~~~~--~~~~~D~~~~~~~~~~~~~~fD~ii~~~~ 130 (231)
+=+-||+|.-+..++.. ..+...++ .+..+++.... . ....+|+|++.--
T Consensus 24 IlvvC~sG~gTS~ll~~kl~~~~~~~gi~~~V~~~~~~~~~--~--~~~~~DlIist~~ 78 (113)
T 1tvm_A 24 IIVACGGAVATSTMAAEEIKELCQSHNIPVELIQCRVNEIE--T--YMDGVHLICTTAR 78 (113)
T ss_dssp EEEESCSCSSHHHHHHHHHHHHHHHTTCCEEEEEECTTTTT--T--STTSCSEEEESSC
T ss_pred EEEECCCCHHHHHHHHHHHHHHHHHcCCeEEEEEecHHHHh--h--ccCCCCEEEECCc
Confidence 34678888877776411 12222222 23334443211 1 1246899988653
Done!