BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045807
(320 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|13278055|gb|AAH03883.1| CDNA sequence BC003883 [Mus musculus]
Length = 310
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 263/321 (81%), Positives = 275/321 (85%), Gaps = 13/321 (4%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLL+NMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLANMYQRPDMITP 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
GVDPQGQ LDPRKIQ HFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE
Sbjct: 61 GVDPQGQPLDPRKIQQHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
HA ALRNL+GRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL
Sbjct: 121 HAGEALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
Query: 181 RRRLFGRSRRRRSRSRSRSRSPHKYRGGYEERSHGGGRGSGRRDDDRDHRLHGRGRRPRS 240
RR+LFGR RRR SRSRSRS H+ G+ +R H GGRG GRRDDDR+ R H +GRRPRS
Sbjct: 181 RRQLFGRYRRRHSRSRSRSPQAHR---GHGDRPH-GGRGYGRRDDDRNQRYHDKGRRPRS 236
Query: 241 RSPGRRGGRSRSPGARR-RSPVRESSVERRAKIEQWNREKEQADSGNKVDNSSYNDDRND 299
RSPG R GRSRSP RR RSPVRE+S ERRAKI QWNREKEQAD+GN N D+
Sbjct: 237 RSPGHR-GRSRSPPGRRDRSPVRENSEERRAKIAQWNREKEQADTGNNDVNHDVTDNH-- 293
Query: 300 DDRDGNGFTPNGGEYSD-PQQ 319
NGF NG +Y D PQQ
Sbjct: 294 ----ANGFQDNGEDYYDHPQQ 310
>gi|356505320|ref|XP_003521439.1| PREDICTED: splicing factor U2af small subunit B-like [Glycine max]
Length = 314
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 238/311 (76%), Positives = 257/311 (82%), Gaps = 10/311 (3%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDM--- 57
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKP+ISPTL+LSNMYQRPDM
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPTISPTLVLSNMYQRPDMNMS 60
Query: 58 -ITPGVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQF 116
IT PQ Q+LDP K+QDHF+DFYEDLFEELSKYG I+SLNICDNLADHMVGNVYVQF
Sbjct: 61 IITNPDQPQPQSLDPDKVQDHFDDFYEDLFEELSKYGPIQSLNICDNLADHMVGNVYVQF 120
Query: 117 REEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKI 176
REE+HAANAL NL GRFY+GRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKI
Sbjct: 121 REEDHAANALMNLTGRFYSGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKI 180
Query: 177 SRELRRRLFGRSRRRRSRSRSRSRSPHKYRGGYEERSHGGGRGSGRRDDDRDHRLHGRGR 236
SR+LRR+LFGR+RR RS SRSRSP + R + E SH GRGSGRRD DR H HGR
Sbjct: 181 SRDLRRKLFGRNRRWNGRSGSRSRSPPRNR-NHGENSH-SGRGSGRRDFDRSHGPHGRRP 238
Query: 237 RPRSRSPGRRGGRSRSPGARRRS-PVRESSVERRAKIEQWNREKEQADSGNKVDNSSYND 295
R RS RG RSRSP R RS P+RESS ERRAKIEQWNREKEQ D+GN ++NS +D
Sbjct: 239 RSRSPR--YRGKRSRSPVGRDRSPPIRESSAERRAKIEQWNREKEQGDTGN-MNNSKSSD 295
Query: 296 DRNDDDRDGNG 306
D + NG
Sbjct: 296 DYQEQSVAQNG 306
>gi|255575357|ref|XP_002528581.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus
communis]
gi|223531977|gb|EEF33789.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus
communis]
Length = 313
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 241/324 (74%), Positives = 253/324 (78%), Gaps = 15/324 (4%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDM+TP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMLTP 60
Query: 61 GVDPQGQA--LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFRE 118
GVDPQ Q+ LDPRKIQDHFEDFY+DLFEELSKYG+IESLNICDNLADHMVGNVYVQFRE
Sbjct: 61 GVDPQAQSQSLDPRKIQDHFEDFYQDLFEELSKYGDIESLNICDNLADHMVGNVYVQFRE 120
Query: 119 EEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISR 178
E+HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISR
Sbjct: 121 EDHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISR 180
Query: 179 ELRRRLFGRSRRRRSRSRSRSRSPHKYRGGYEERSHGGGRGSGRRDDDRDHRLHGRGRRP 238
ELRRR R R R GY+ER H GGRG GRRDDDR H R
Sbjct: 181 ELRRR---LFGRNRRRRSRSRSHSPSRHRGYDERPH-GGRGFGRRDDDRAHHHERGRRPR 236
Query: 239 RSRSPGRRGGRSRSPGARRRS-PVRESSVERRAKIEQWNREKEQADSGNKVDNSSYNDDR 297
R G G R RS PVRESS ERRAKIEQWNRE+EQ +SGN+ D +
Sbjct: 237 SRSPGRRGGRSRSPAGRRNRSPPVRESSAERRAKIEQWNREREQTESGNR-------DGQ 289
Query: 298 N-DDDRDGNGFTPNGGEYSDPQQH 320
N D+DR+ NG NGG Y D Q H
Sbjct: 290 NLDNDRNSNGDAKNGGHYDDDQHH 313
>gi|356572520|ref|XP_003554416.1| PREDICTED: splicing factor U2af small subunit B-like [Glycine max]
Length = 314
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 234/311 (75%), Positives = 255/311 (81%), Gaps = 10/311 (3%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDM--- 57
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKP+ISPTL+LSNMYQRPDM
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPTISPTLVLSNMYQRPDMNMN 60
Query: 58 -ITPGVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQF 116
IT PQ Q+LDP K+QDHF+DFYEDLFEELSKYG I+SLNICDNLADHMVGNVYVQF
Sbjct: 61 IITNPDQPQPQSLDPDKVQDHFDDFYEDLFEELSKYGPIQSLNICDNLADHMVGNVYVQF 120
Query: 117 REEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKI 176
REE+HAANAL NL GRFY+GRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKI
Sbjct: 121 REEDHAANALMNLTGRFYSGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKI 180
Query: 177 SRELRRRLFGRSRRRRSRSRSRSRSPHKYRGGYEERSHGGGRGSGRRDDDRDHRLHGRGR 236
SR+LRR+LFGR+RR RS SRS+SP + R + E H GRGSGRRD DR H HGR
Sbjct: 181 SRDLRRKLFGRNRRWNGRSGSRSKSPPRNR-NHGEHLH-SGRGSGRRDFDRSHGHHGRRP 238
Query: 237 RPRSRSPGRRGGRSRSPGARRRS-PVRESSVERRAKIEQWNREKEQADSGNKVDNSSYND 295
R RS RG RSRSP R RS P+RE+S ERRAKIEQWNREKEQ ++ NK +N+ ND
Sbjct: 239 RSRSPR--YRGKRSRSPVGRDRSPPIRENSAERRAKIEQWNREKEQGETSNK-NNTKSND 295
Query: 296 DRNDDDRDGNG 306
D + NG
Sbjct: 296 DYQEQSVAQNG 306
>gi|294463000|gb|ADE77038.1| unknown [Picea sitchensis]
Length = 334
Score = 436 bits (1120), Expect = e-120, Method: Compositional matrix adjust.
Identities = 232/324 (71%), Positives = 252/324 (77%), Gaps = 32/324 (9%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHT+PSISPT+LLSNMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTRPSISPTILLSNMYQRPDMITP 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
G+DPQG ALDP+KIQ+HFEDFYEDLFEEL KYGEIESLN+CDNLADHMVGNVYVQFREEE
Sbjct: 61 GMDPQGHALDPQKIQEHFEDFYEDLFEELGKYGEIESLNVCDNLADHMVGNVYVQFREEE 120
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
HAA AL+ L GRFYAGR IIVDFSPVTDFREATCRQYEEN CNRGGYCNFMHLKKISREL
Sbjct: 121 HAAAALQALTGRFYAGRAIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKKISREL 180
Query: 181 RRRLFGRSRR-----------------RRSRSRSRSRSPHKYRG---------GYEERSH 214
RR+LFGR RR R R P RG GY++R H
Sbjct: 181 RRQLFGRYRRYGHGYSRSRSRSLSPGLSVERHRGYDDRPRGGRGYDDRPYGGRGYDDRPH 240
Query: 215 GGGRGSGRRDDDRDHRLHG---RGRRPRSRSPGRRGGRSRSPGARR-RSPVRESSVERRA 270
GGRG GR+ ++RD+ + GRRPRSRSPG R GRSRS +R RSPVRE S ERRA
Sbjct: 241 -GGRGFGRK-NERDYPGYHDDRHGRRPRSRSPGHRQGRSRSHSPKRNRSPVREGSAERRA 298
Query: 271 KIEQWNREKEQADSGNKVDNSSYN 294
KIEQWNRE+EQA + + + S N
Sbjct: 299 KIEQWNREREQAAASSDANQSMQN 322
>gi|449451104|ref|XP_004143302.1| PREDICTED: splicing factor U2af small subunit A-like [Cucumis
sativus]
Length = 317
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 254/291 (87%), Positives = 266/291 (91%), Gaps = 6/291 (2%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
GVDPQGQALDPRK+QDHFEDFYEDLFEELSKYG++ESLNICDNLADHMVGNVYVQFREEE
Sbjct: 61 GVDPQGQALDPRKVQDHFEDFYEDLFEELSKYGDLESLNICDNLADHMVGNVYVQFREEE 120
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
AANAL NLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL
Sbjct: 121 QAANALHNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
Query: 181 RRRLFGRSRRRRSRSRSRSRSPHKYRGGYEE----RSHGGGRGSGRRDDDRDHRLHGRGR 236
RRRLFGRSRRRRSRSRSRS+SPHK+ GYEE G GRG RRD ++D R H R R
Sbjct: 181 RRRLFGRSRRRRSRSRSRSQSPHKHH-GYEERSHGGGGGRGRGPSRRDGEKDPRYHDRSR 239
Query: 237 RPRSRSPGRRGGRSRSPGARR-RSPVRESSVERRAKIEQWNREKEQADSGN 286
RPRSRSP RGGRSRSPG RR RSPVRESS ERRAKIEQWNR++E+ D+G+
Sbjct: 240 RPRSRSPRHRGGRSRSPGGRRNRSPVRESSAERRAKIEQWNRDREKEDNGS 290
>gi|449528561|ref|XP_004171272.1| PREDICTED: splicing factor U2af small subunit A-like [Cucumis
sativus]
Length = 317
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 254/291 (87%), Positives = 266/291 (91%), Gaps = 6/291 (2%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
GVDPQGQALDPRK+QDHFEDFYEDLFEELSKYG++ESLNICDNLADHMVGNVYVQFREEE
Sbjct: 61 GVDPQGQALDPRKVQDHFEDFYEDLFEELSKYGDLESLNICDNLADHMVGNVYVQFREEE 120
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
AANAL NLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL
Sbjct: 121 QAANALHNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
Query: 181 RRRLFGRSRRRRSRSRSRSRSPHKYRGGYEE----RSHGGGRGSGRRDDDRDHRLHGRGR 236
RRRLFGRSRRRRSRSRSRS+SPHK+ GYEE G GRG RRD ++D R H R R
Sbjct: 181 RRRLFGRSRRRRSRSRSRSQSPHKHH-GYEERSHGGGGGRGRGPSRRDGEKDPRYHDRSR 239
Query: 237 RPRSRSPGRRGGRSRSPGARR-RSPVRESSVERRAKIEQWNREKEQADSGN 286
RPRSRSP RGGRSRSPG RR RSPVRESS ERRAKIEQWNR++E+ D+G+
Sbjct: 240 RPRSRSPRHRGGRSRSPGGRRNRSPVRESSAERRAKIEQWNRDREKDDNGS 290
>gi|449443402|ref|XP_004139466.1| PREDICTED: splicing factor U2af small subunit A-like [Cucumis
sativus]
gi|449510609|ref|XP_004163713.1| PREDICTED: splicing factor U2af small subunit A-like [Cucumis
sativus]
Length = 326
Score = 419 bits (1077), Expect = e-115, Method: Compositional matrix adjust.
Identities = 222/281 (79%), Positives = 238/281 (84%), Gaps = 2/281 (0%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
GVD QG +DPR IQDHFE+FYEDLF+EL+KYGEIESLN+CDNLADHMVGNVYVQFREEE
Sbjct: 61 GVDAQGNPIDPRNIQDHFEEFYEDLFQELNKYGEIESLNVCDNLADHMVGNVYVQFREEE 120
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
AANALRNL+GRFYAGRPIIVDFSPVTDFREATCRQYEEN+CNRGGYCNFMHLK+I REL
Sbjct: 121 QAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRIGREL 180
Query: 181 RRRLFGRSRRRRSRSRSRSRSPHKYRGGYEERSHGGGRGSGRRDDDRDHRLHGRGRRPRS 240
R LF RRR S SRSRSRSP++ YEERS+G G RR D+RD R RR R+
Sbjct: 181 RHELFAMYRRRHSHSRSRSRSPYR-HRSYEERSYGK-HGHSRRYDERDAYHESRSRRHRT 238
Query: 241 RSPGRRGGRSRSPGARRRSPVRESSVERRAKIEQWNREKEQ 281
SPG R G + RSPVRE S ERRAKIEQWN+E+EQ
Sbjct: 239 TSPGHRSRSRSPRGRKNRSPVREGSEERRAKIEQWNKEREQ 279
>gi|255573032|ref|XP_002527446.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus
communis]
gi|223533181|gb|EEF34938.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus
communis]
Length = 322
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 235/321 (73%), Positives = 258/321 (80%), Gaps = 7/321 (2%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPS+SPTLLLSNMYQRPD+ITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSVSPTLLLSNMYQRPDIITP 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
GVD G +DPRKIQ HFE+FYEDLF+ELSKYGEI+SLN+CDNLADHMVGNVYVQFREEE
Sbjct: 61 GVDANGNPIDPRKIQQHFEEFYEDLFQELSKYGEIDSLNVCDNLADHMVGNVYVQFREEE 120
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A NALRNL+GRFYAGRPII DFSPVTDFREATCRQYEEN CNRGGYCNFMHLK+I REL
Sbjct: 121 DAENALRNLSGRFYAGRPIIADFSPVTDFREATCRQYEENACNRGGYCNFMHLKRIGREL 180
Query: 181 RRRLFGRSRRRRSRSRSRSRSPHKYRGGYEERSHGGGRGSGRRDDDRDHRLHGRGRRPRS 240
R +LFGR RRRRS S SRSRS ++R +EE H GRGSGRR DD D R RR RS
Sbjct: 181 RHQLFGRYRRRRSHSHSRSRSLQRHR-SHEEYYH-VGRGSGRRYDDEDRYRGSRSRRYRS 238
Query: 241 RSPGRRGGRSRSPGARR-RSPVRESSVERRAKIEQWNREKE-QADSGNKVDNSSYNDDRN 298
SP + RSRSPG RR RSPVRE S ERRA+I QWN+EKE Q ++ +V+ S N+
Sbjct: 239 ISPDQSRRRSRSPGLRRNRSPVREGSEERRARIAQWNKEKEQQQETAKQVNTDSGNNTSG 298
Query: 299 DDDRDGNGFTPNGGEYSDPQQ 319
D NG+ NG + QQ
Sbjct: 299 VGD---NGYKQNGNKDHGYQQ 316
>gi|388521171|gb|AFK48647.1| unknown [Medicago truncatula]
Length = 327
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 232/315 (73%), Positives = 253/315 (80%), Gaps = 25/315 (7%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKP+ISPTL+LSNMYQRPDM
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPTISPTLVLSNMYQRPDMNLN 60
Query: 61 GVDPQG--------------QALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLAD 106
++P ++LDP K+Q+HF+DFYEDLFEELSKYG+I+SLNICDNLAD
Sbjct: 61 FINPTPNQPQQPQPPQPPQPESLDPDKLQEHFDDFYEDLFEELSKYGQIQSLNICDNLAD 120
Query: 107 HMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGG 166
HMVGNVYVQ++EE+HAANAL NL GRFY+GRPIIV FSPVTDFREATCRQYEENVCNRGG
Sbjct: 121 HMVGNVYVQYKEEDHAANALMNLTGRFYSGRPIIVGFSPVTDFREATCRQYEENVCNRGG 180
Query: 167 YCNFMHLKKISRELRRRLFGRSRRRRS-RSRSRSRSPHKYRGGYEERSHGGGRGSGRRDD 225
YCNFMHLKKISR+LR+RLFGRS RR + RS SRSRSP + R YE RS+ GRGSGRRD
Sbjct: 181 YCNFMHLKKISRDLRKRLFGRSSRRWNDRSGSRSRSPPRNR-NYEGRSY-SGRGSGRRDL 238
Query: 226 DRDHRLHGRGRRPRSRSPGRRGGRSRSPGARRRSP-----VRESSVERRAKIEQWNREKE 280
DR H HGR R RS RG RSRSP R RSP RESSVERRA+IEQWNREKE
Sbjct: 239 DRSHGSHGRRPRSRSPR--HRGRRSRSPVGRDRSPNPVRGERESSVERRARIEQWNREKE 296
Query: 281 QADSGNKVDNSSYND 295
DSGNK DN S ND
Sbjct: 297 VGDSGNK-DNKSNND 310
>gi|224286856|gb|ACN41131.1| unknown [Picea sitchensis]
Length = 312
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 236/327 (72%), Positives = 252/327 (77%), Gaps = 29/327 (8%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHT+P+ISPT+LLSNMYQRPDM+TP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTRPTISPTILLSNMYQRPDMVTP 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
G+D QG A+DPRKIQ+HFEDFYEDLFEEL KYGE+ESLN+CDNLADHMVGNVYVQFREEE
Sbjct: 61 GMDIQGHAMDPRKIQEHFEDFYEDLFEELGKYGELESLNVCDNLADHMVGNVYVQFREEE 120
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE- 179
AANALR+L GRFYAGRPIIVDFSPVTDFREATCRQYEEN CNRGGYCNFMHLKKISRE
Sbjct: 121 QAANALRSLQGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKKISREL 180
Query: 180 LRRRLFGRSRRRRSRSRSRSRSPHKYRGGYEERSH------GGGRGSGRRDDDRDHRLHG 233
RR R SRSRSRS SPHK YE+ H GGRG RR D D H
Sbjct: 181 RRRLFGRYRRYSHSRSRSRSASPHK---DYEKHRHHDDRPRHGGRGYDRRYDVDDRDGH- 236
Query: 234 RGRRPRSRSP-GRRGGRSRSPGARR-RSPVRESSVERRAKIEQWNREKEQADSGNKVDNS 291
RGRR RSRSP G R GRSRS RR RSP+RE S ERRAKIEQWNREKE A + + + N
Sbjct: 237 RGRRTRSRSPGGHRRGRSRSHSPRRNRSPIREGSAERRAKIEQWNREKE-AQASSTIANY 295
Query: 292 SYNDDRNDDDRDGNGFTPNGGEYSDPQ 318
NGG YS+PQ
Sbjct: 296 PMQ---------------NGGAYSNPQ 307
>gi|116788026|gb|ABK24730.1| unknown [Picea sitchensis]
Length = 312
Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust.
Identities = 234/324 (72%), Positives = 252/324 (77%), Gaps = 23/324 (7%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHT+P+ISPT+LLSNMYQRPDM+TP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTRPTISPTILLSNMYQRPDMVTP 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
G+D QG A+DPRKIQ+HFEDFYEDLFEEL KYGE+ESLN+CDNLADHMVGNVYVQFREEE
Sbjct: 61 GMDIQGHAMDPRKIQEHFEDFYEDLFEELGKYGELESLNVCDNLADHMVGNVYVQFREEE 120
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE- 179
AANALR+L GRFYAGRPIIVDFSPVTDFREATCRQYEEN CNRGGYCNFMHLKKISRE
Sbjct: 121 QAANALRSLQGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKKISREL 180
Query: 180 LRRRLFGRSRRRRSRSRSRSRSPHK---YRGGYEERSHGGGRGSGRRDDDRDHRLHGRGR 236
RR R SRSRSRS SPHK +++R GGRG RR D D H RGR
Sbjct: 181 RRRLFGRYRRYSHSRSRSRSASPHKDHEKHRHHDDRPRHGGRGYDRRYDVDDRDGH-RGR 239
Query: 237 RPRSRSP-GRRGGRSRSPGARR-RSPVRESSVERRAKIEQWNREKEQADSGNKVDNSSYN 294
R RSRSP G R GRSRS RR RSP+RE S ERRAKIEQWNREKE A + + + N
Sbjct: 240 RTRSRSPGGHRRGRSRSHSPRRNRSPIREGSAERRAKIEQWNREKE-AQASSTIANHPMQ 298
Query: 295 DDRNDDDRDGNGFTPNGGEYSDPQ 318
NGG YS+PQ
Sbjct: 299 ---------------NGGAYSNPQ 307
>gi|356543538|ref|XP_003540217.1| PREDICTED: splicing factor U2af small subunit A-like [Glycine max]
Length = 315
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 218/298 (73%), Positives = 236/298 (79%), Gaps = 9/298 (3%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPT+LLSNMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTILLSNMYQRPDMITP 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
GVD G +DPRKIQDHFE+FYEDLF+ELSKYG+IESLN+CDNLADHMVGNVYVQFREEE
Sbjct: 61 GVDAHGHPIDPRKIQDHFEEFYEDLFDELSKYGDIESLNVCDNLADHMVGNVYVQFREEE 120
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
HAANA+RNL GRFYAGRPIIVDFSPVTDFREATCRQYEEN CNRGGYCNFMHLK+ISREL
Sbjct: 121 HAANAVRNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISREL 180
Query: 181 RRRLFGRSRRRRSRSRSRSRSPHKYRGGYEERSHGGGRGSGRRDDDRD---HRLHGRGRR 237
RR+LFG+S R SRSRSRS +EERSH R R+ DDRD R R
Sbjct: 181 RRQLFGKSHGRHSRSRSRSPY---RHRSHEERSH---RSHSRKYDDRDHHHESRSRRHRS 234
Query: 238 PRSRSPGRRGGRSRSPGARRRSPVRESSVERRAKIEQWNREKEQADSGNKVDNSSYND 295
R R G R SPVR+ S ERRA+IEQWNRE+E + G KV+ N+
Sbjct: 235 TSPRHRRGRSRSRSPGGRRHHSPVRDGSEERRARIEQWNREREDQEPGYKVNAEEINN 292
>gi|388506242|gb|AFK41187.1| unknown [Lotus japonicus]
Length = 318
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 218/302 (72%), Positives = 236/302 (78%), Gaps = 13/302 (4%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKP+ISPTL+LSNMYQRPDM
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPTISPTLVLSNMYQRPDMNLN 60
Query: 61 GVDPQGQALDPR------KIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYV 114
+ Q K+QDHF+DFYEDLF+ELSKYG+I+SLNICDNLADHMVGNVYV
Sbjct: 61 IITQPNQPQHQPQPLDPDKLQDHFDDFYEDLFQELSKYGQIQSLNICDNLADHMVGNVYV 120
Query: 115 QFREEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLK 174
Q++EE+HAANAL NL GRFY+GRPII DFSPVTDFREATCRQYEENVCNRGGYCNFMHLK
Sbjct: 121 QYKEEDHAANALTNLTGRFYSGRPIIADFSPVTDFREATCRQYEENVCNRGGYCNFMHLK 180
Query: 175 KISRELRRRLFGRSRR---RRSRSRSRSRSPHKYRGGYEERSHGGGRGSGRRDD-DRDHR 230
KISR+LRRRLFGR++R RR YEER GGRG R D DR H
Sbjct: 181 KISRDLRRRLFGRNKRWNDRRGSRSRSRSRSPPRNRNYEERPQFGGRGGSGRRDFDRSHG 240
Query: 231 LHGRGRRPRSRSPGR-RGGRSRSPGARRRSPVRESSVERRAKIEQWNREKEQADSGNKVD 289
H GR+PRSRSP R RG RSRSP R RSPVRESS ERRAKIEQWN EKEQ D+G K +
Sbjct: 241 RH--GRKPRSRSPPRFRGKRSRSPAGRDRSPVRESSAERRAKIEQWNGEKEQDDTGPKNN 298
Query: 290 NS 291
S
Sbjct: 299 TS 300
>gi|148908155|gb|ABR17193.1| unknown [Picea sitchensis]
Length = 344
Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust.
Identities = 229/333 (68%), Positives = 243/333 (72%), Gaps = 45/333 (13%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAEHLASIFGTEKDRVNCPFYFKIG CRHGDRCSRLHT+PSISPTLLLSNMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGVCRHGDRCSRLHTRPSISPTLLLSNMYQRPDMITP 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
G+DPQG ALDPRKIQ+HFEDFYEDLFEEL KYG IESLN+CDNLADHMVGNVYVQFREEE
Sbjct: 61 GMDPQGHALDPRKIQEHFEDFYEDLFEELGKYGAIESLNVCDNLADHMVGNVYVQFREEE 120
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
HAA AL+ L GRFYA R IIVDFSPVTDFREATCRQYEEN CNRGGYCNFMHLKKISREL
Sbjct: 121 HAAAALQALTGRFYAERAIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKKISREL 180
Query: 181 RRRLFGRSRR-------RRSRSRSRSRSPHKYRGGYEERSHGGGRGSGRRDDDRDHRLHG 233
RR+LFGR RR RSRS S S + R GY++R G GR DDR H G
Sbjct: 181 RRQLFGRYRRYGHGYSRSRSRSLSPQLSVERNR-GYDDRPRG-----GRGYDDRPHGGRG 234
Query: 234 -------------------------------RGRRPRSRSPGRRGGRSRSPGARRRS-PV 261
GRRPRSRSPG R GRSRS +R V
Sbjct: 235 YDGGRGRGYDGRGRGFGRRNERDYPSYHDDRHGRRPRSRSPGHRRGRSRSRSPKRNRGSV 294
Query: 262 RESSVERRAKIEQWNREKEQADSGNKVDNSSYN 294
RE S ERRAKIEQWNRE+EQA + + + S N
Sbjct: 295 REGSAERRAKIEQWNREREQAATSSTANESMQN 327
>gi|359482307|ref|XP_002277445.2| PREDICTED: splicing factor U2af small subunit B-like [Vitis
vinifera]
Length = 343
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 181/186 (97%), Positives = 185/186 (99%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDM+TP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMVTP 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
GVDPQGQ LDPRKIQ+HFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE
Sbjct: 61 GVDPQGQPLDPRKIQEHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEEN+CNRGGYCNFMHLKKISREL
Sbjct: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENICNRGGYCNFMHLKKISREL 180
Query: 181 RRRLFG 186
RR+LFG
Sbjct: 181 RRQLFG 186
>gi|226506342|ref|NP_001150605.1| splicing factor U2af 38 kDa subunit [Zea mays]
gi|195640524|gb|ACG39730.1| splicing factor U2af 38 kDa subunit [Zea mays]
gi|223947729|gb|ACN27948.1| unknown [Zea mays]
gi|407232662|gb|AFT82673.1| C3H4 C3H transcription factor, partial [Zea mays subsp. mays]
gi|414591925|tpg|DAA42496.1| TPA: Splicing factor U2af subunit isoform 1 [Zea mays]
gi|414591926|tpg|DAA42497.1| TPA: Splicing factor U2af subunit isoform 2 [Zea mays]
gi|414591927|tpg|DAA42498.1| TPA: Splicing factor U2af subunit isoform 3 [Zea mays]
gi|414591928|tpg|DAA42499.1| TPA: Splicing factor U2af subunit isoform 4 [Zea mays]
Length = 299
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/298 (67%), Positives = 226/298 (75%), Gaps = 20/298 (6%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P+ISPTL+L+NMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLVLANMYQRPDMITP 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
GVD QGQ +DP K+Q+HFEDFYED++EEL K+GEIE+LN+CDNLADHM+GNVYVQFREEE
Sbjct: 61 GVDAQGQPIDPEKMQEHFEDFYEDIYEELGKFGEIENLNVCDNLADHMIGNVYVQFREEE 120
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
AA A L GRFY+GRPIIV++SPVTDFREATCRQ+EEN CNRGGYCNFMH+K+I R+L
Sbjct: 121 QAAAAYNALQGRFYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGRDL 180
Query: 181 RRRLFGRSRRRRSRSRSRSRSPHKYRGGY------------------EERSHGGGRGSGR 222
RR+L+GRS RR RSRSRSP R G+ + G G G
Sbjct: 181 RRKLYGRSASRRYHGRSRSRSPPPQRRGHRDRDDYRGGGGGGRGRGSRYDRYDDGAGRGG 240
Query: 223 RDDDRDHRLHGRGRRPRSRSPGRRGGRSRSPGARRRSPVRESSVERRAKIEQWNREKE 280
R D D GR R GRR R SP R RSPVRESS ERRAKIEQWNRE+E
Sbjct: 241 RHDRYDDGAGRGGRHDRYDDGGRR--RHGSPPRRARSPVRESSEERRAKIEQWNRERE 296
>gi|242088837|ref|XP_002440251.1| hypothetical protein SORBIDRAFT_09g028530 [Sorghum bicolor]
gi|241945536|gb|EES18681.1| hypothetical protein SORBIDRAFT_09g028530 [Sorghum bicolor]
Length = 307
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 201/306 (65%), Positives = 225/306 (73%), Gaps = 28/306 (9%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P+ISPTL+L+NMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLVLANMYQRPDMITP 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
GVD QGQ +DP K+Q+HFEDFYED++EEL K+GEIE+LN+CDNLADHM+GNVYVQFREEE
Sbjct: 61 GVDAQGQPIDPEKMQEHFEDFYEDIYEELGKFGEIENLNVCDNLADHMIGNVYVQFREEE 120
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
AA A L GRFY+GRPIIV++SPVTDFREATCRQ+EEN CNRGGYCNFMH+K+I R+L
Sbjct: 121 QAAAAYNALQGRFYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGRDL 180
Query: 181 RRRLFGRSRRRRSRSRSRSRSPHKYRGG--------------------------YEERSH 214
RR+L+GRS RR RSRSRSP R G +
Sbjct: 181 RRKLYGRSASRRYHGRSRSRSPPPQRRGHRDRDDYHHRDRDDYRGGGGGGRGRGSRHDRY 240
Query: 215 GGGRGSGRRDDDRDHRLHGRGRRPRSRSPGRRGGRSRSPGARRRSPVRESSVERRAKIEQ 274
G G G R D D GR R GRR R SP R RSPVRESS ERRAKIEQ
Sbjct: 241 DDGAGRGGRHDRYDDGAGRGGRHERYDDGGRR--RHGSPPRRARSPVRESSEERRAKIEQ 298
Query: 275 WNREKE 280
WNRE+E
Sbjct: 299 WNRERE 304
>gi|413948479|gb|AFW81128.1| splicing factor U2af subunit isoform 1 [Zea mays]
gi|413948480|gb|AFW81129.1| splicing factor U2af subunit isoform 2 [Zea mays]
gi|413948481|gb|AFW81130.1| splicing factor U2af subunit isoform 3 [Zea mays]
gi|413948482|gb|AFW81131.1| splicing factor U2af subunit isoform 4 [Zea mays]
gi|413948483|gb|AFW81132.1| splicing factor U2af subunit isoform 5 [Zea mays]
Length = 304
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 201/303 (66%), Positives = 227/303 (74%), Gaps = 25/303 (8%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P+ISPTL+L+NMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLVLANMYQRPDMITP 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
GVD QGQ +DP K+Q+HFEDFYED++EEL K+GEIE+LN+CDNLADHM+GNVYVQFREEE
Sbjct: 61 GVDAQGQPIDPEKMQEHFEDFYEDIYEELGKFGEIENLNVCDNLADHMIGNVYVQFREEE 120
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
AA A L GRFY+GRPIIV++SPVTDFREATCRQ+EEN CNRGGYCNFMH+K+I R+L
Sbjct: 121 QAAAAYNALQGRFYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGRDL 180
Query: 181 RRRLFGRSRRRRSRSRSRSRSPHK--YRGGYEERS---------------------HGGG 217
RR+L+GRS RR +RSRS P + YR Y R + G
Sbjct: 181 RRKLYGRSASRRYHARSRSPPPQRRGYREDYHHRDRDEYRGGGGGGGRGRGSRHDRYDDG 240
Query: 218 RGSGRRDDDRDHRLHGRGRRPRSRSPGRRGGRSRSPGARRRSPVRESSVERRAKIEQWNR 277
G G R D D GR R GRR R SP R RSPVRESS ERRAKIEQWNR
Sbjct: 241 AGRGGRHDRYDDGAGRGGRYERYDDGGRR--RHGSPPRRGRSPVRESSEERRAKIEQWNR 298
Query: 278 EKE 280
E+E
Sbjct: 299 ERE 301
>gi|226492577|ref|NP_001148499.1| splicing factor U2af 38 kDa subunit [Zea mays]
gi|195619816|gb|ACG31738.1| splicing factor U2af 38 kDa subunit [Zea mays]
Length = 305
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 201/304 (66%), Positives = 227/304 (74%), Gaps = 26/304 (8%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P+ISPTL+L+NMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLVLANMYQRPDMITP 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
GVD QGQ +DP K+Q+HFEDFYED++EEL K+GEIE+LN+CDNLADHM+GNVYVQFREEE
Sbjct: 61 GVDAQGQPIDPEKMQEHFEDFYEDIYEELGKFGEIENLNVCDNLADHMIGNVYVQFREEE 120
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
AA A L GRFY+GRPIIV++SPVTDFREATCRQ+EEN CNRGGYCNFMH+K+I R+L
Sbjct: 121 QAAAAYNALQGRFYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGRDL 180
Query: 181 RRRLFGRSRRRRSRSRSRSRSPHK--YRGGYEERS----------------------HGG 216
RR+L+GRS RR +RSRS P + YR Y R +
Sbjct: 181 RRKLYGRSASRRYHARSRSPPPQRRGYREDYHHRDRDEYRGGGGGGGGRGRGSRHDRYDD 240
Query: 217 GRGSGRRDDDRDHRLHGRGRRPRSRSPGRRGGRSRSPGARRRSPVRESSVERRAKIEQWN 276
G G G R D D GR R GRR R SP R RSPVRESS ERRAKIEQWN
Sbjct: 241 GAGRGGRHDRYDDGAGRGGRYERYDDGGRR--RHGSPPRRGRSPVRESSEERRAKIEQWN 298
Query: 277 REKE 280
RE+E
Sbjct: 299 RERE 302
>gi|297818960|ref|XP_002877363.1| hypothetical protein ARALYDRAFT_323163 [Arabidopsis lyrata subsp.
lyrata]
gi|297323201|gb|EFH53622.1| hypothetical protein ARALYDRAFT_323163 [Arabidopsis lyrata subsp.
lyrata]
Length = 277
Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust.
Identities = 205/293 (69%), Positives = 219/293 (74%), Gaps = 25/293 (8%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAEHLASIFGTEKDR NC FYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRANCHFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
GVD G +DPRK+Q HFEDFYEDLFEEL+KYGEIESLN+CDNL+DHMVGNVYVQFREEE
Sbjct: 61 GVDVNGNRIDPRKMQAHFEDFYEDLFEELNKYGEIESLNVCDNLSDHMVGNVYVQFREEE 120
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A NAL NL GRFYAGRPIIVDFSPVTDFREATCRQYEE C RGGYCNFMHLK IS L
Sbjct: 121 QAGNALHNLQGRFYAGRPIIVDFSPVTDFREATCRQYEEETCKRGGYCNFMHLKSISSGL 180
Query: 181 RRRLFGRSRRRRSRSRSRSRSPHKYRGGYEERSHGGGRGSGRRDDDRDHRLH-------G 233
RR+L+GR + R SRSRS Y RSH DDR H H
Sbjct: 181 RRQLYGRYKNRHIHSRSRS--------PYRHRSH----------DDRSHERHSRSRRYDD 222
Query: 234 RGRRPRSRSPGRRGGRSRSPGARRRSPVRESSVERRAKIEQWNREKEQADSGN 286
SRS RR G R++SPVR+ S ERRAKIEQWNREKE+ ++ N
Sbjct: 223 DDDDGESRSRSRRYRSRSPSGRRQKSPVRDGSEERRAKIEQWNREKEEQENAN 275
>gi|195625888|gb|ACG34774.1| splicing factor U2af 38 kDa subunit [Zea mays]
Length = 307
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 205/311 (65%), Positives = 230/311 (73%), Gaps = 38/311 (12%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P+ISPTL+L+NMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLVLANMYQRPDMITP 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
GVD QGQ +DP K+Q+HFEDFYED++EEL K+GEIE+LN+CDNLADHM+GNVYVQFREEE
Sbjct: 61 GVDAQGQPIDPEKMQEHFEDFYEDIYEELGKFGEIENLNVCDNLADHMIGNVYVQFREEE 120
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
AA A L GRFY+GRPIIV++SPVTDFREATCRQ+EEN CNRGGYCNFMH+K+I R+L
Sbjct: 121 QAAAAYNALQGRFYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGRDL 180
Query: 181 RRRLFGRSRRRRSRSRSRSRSPHKYRGGYEERSH-------------------------- 214
RR+L+GRS RR RSRSRSP R G+ +R
Sbjct: 181 RRKLYGRSASRRYHGRSRSRSPPPQRRGHRDRDDYHHRDRDDYRGGGGGGRGRGSRYDRY 240
Query: 215 --GGGRGS--GRRDDDRDHRLHGR-GRRPRSRSPGRRGGRSRSPGARRRSPVRESSVERR 269
G GRG R DD GR GR R GRR R SP R RSPVRESS ERR
Sbjct: 241 DDGAGRGGRHARYDDG-----AGRGGRHDRYDDGGRR--RHGSPSRRARSPVRESSEERR 293
Query: 270 AKIEQWNREKE 280
AKIEQWNRE+E
Sbjct: 294 AKIEQWNRERE 304
>gi|212275838|ref|NP_001130754.1| splicing factor U2af subunit isoform 1 [Zea mays]
gi|194690026|gb|ACF79097.1| unknown [Zea mays]
gi|194703336|gb|ACF85752.1| unknown [Zea mays]
gi|407232734|gb|AFT82709.1| C3H53 C3H type transcription factor, partial [Zea mays subsp. mays]
gi|413946518|gb|AFW79167.1| splicing factor U2af subunit isoform 1 [Zea mays]
gi|413946519|gb|AFW79168.1| splicing factor U2af subunit isoform 2 [Zea mays]
gi|413946520|gb|AFW79169.1| splicing factor U2af subunit isoform 3 [Zea mays]
Length = 307
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 201/323 (62%), Positives = 227/323 (70%), Gaps = 62/323 (19%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P+ISPTL+L+NMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLVLANMYQRPDMITP 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
GVD QGQ +DP K+Q+HFEDFYED++EEL K+GEIE+LN+CDNLADHM+GNVYVQFREEE
Sbjct: 61 GVDAQGQPIDPEKMQEHFEDFYEDIYEELGKFGEIENLNVCDNLADHMIGNVYVQFREEE 120
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
AA A L GRFY+GRPIIV++SPVTDFREATCRQ+EEN CNRGGYCNFMH+K+I R+L
Sbjct: 121 QAAAAYNALQGRFYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGRDL 180
Query: 181 RRRLFGRSRRRRSRSRSRSRSPHKYRGG-------------------------------Y 209
RR+L+GRS RR RSRSRSP R G Y
Sbjct: 181 RRKLYGRSASRRYHGRSRSRSPPPQRRGHRDRDDYHHRDRDDYRGGGGGGRGRGSRYDRY 240
Query: 210 EERSH----------GGGRGSGRRD--DDRDHRLHGRGRRPRSRSPGRRGGRSRSPGARR 257
++ + G GRG GR D DD R HG SP R
Sbjct: 241 DDGAGRGGRHGRYDDGAGRG-GRHDRYDDGGRRRHG------------------SPSRRA 281
Query: 258 RSPVRESSVERRAKIEQWNREKE 280
RSPVRESS ERRAKIEQWNRE+E
Sbjct: 282 RSPVRESSEERRAKIEQWNRERE 304
>gi|351629504|gb|AEQ54731.1| SiU2af35 [Setaria italica]
Length = 294
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 197/291 (67%), Positives = 224/291 (76%), Gaps = 11/291 (3%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P+ISPTL+L+NMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLVLANMYQRPDMITP 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
GVD QGQ +DP K+Q+HFEDFYED++EEL K+GEIE+LN+CDNLADHM+GNVYVQFREEE
Sbjct: 61 GVDAQGQPIDPEKMQEHFEDFYEDIYEELGKFGEIENLNVCDNLADHMIGNVYVQFREEE 120
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
AA A L GRFY+GRPIIV++SPVTDFREATCRQ+EEN CNRGGYCNFMH+K+I ++L
Sbjct: 121 QAAAAYNALQGRFYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGKDL 180
Query: 181 RRRLFGRSRRRRSRSRSRSRSPHKYRGGYEERSHGGGRGSGRRDDDRDHRLHGRGRRPRS 240
RR+L+GRS R+ RSRSRSP R G+ +R R R G
Sbjct: 181 RRKLYGRSASRKYHGRSRSRSPPPQRRGHRDRDDYHRDRDDYRGGGGGGRGRGSRHDRYD 240
Query: 241 RSPGRR--------GGRSR--SPGARR-RSPVRESSVERRAKIEQWNREKE 280
GR GGR R SP RR RSPVRESS ERRAKIEQWNRE+E
Sbjct: 241 DGGGRGGRHDRYDDGGRRRHGSPPPRRGRSPVRESSEERRAKIEQWNRERE 291
>gi|242058279|ref|XP_002458285.1| hypothetical protein SORBIDRAFT_03g030670 [Sorghum bicolor]
gi|241930260|gb|EES03405.1| hypothetical protein SORBIDRAFT_03g030670 [Sorghum bicolor]
Length = 288
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 198/286 (69%), Positives = 224/286 (78%), Gaps = 6/286 (2%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P+ISPTL+L NMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLVLVNMYQRPDMITP 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
GVD QGQ +DPRK+Q+HFEDFYED++EELSK+GEIE+LN+CDNLADHM+GNVYVQFREE+
Sbjct: 61 GVDAQGQPIDPRKMQEHFEDFYEDIYEELSKFGEIENLNVCDNLADHMIGNVYVQFREED 120
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
AA A L GRFY+GRPI+VDFSPVTDFREATCRQYEEN CNRGGYCNFMH+KKI R+L
Sbjct: 121 QAAAAHTALQGRFYSGRPIVVDFSPVTDFREATCRQYEENSCNRGGYCNFMHVKKIGRDL 180
Query: 181 RRRLFGRSRRRRSRSRSRSRSPHKYRGGYEERSHGGGRGSGRRDDDRDHRLHGRGRRPRS 240
R+++FG +R R RSRS SPH R + + G G G R D G R S
Sbjct: 181 RKKMFGHY-KRPYRGRSRSPSPHHRRERRDRDDYRGAGGGGGRGRDDYRGGGGGRRGGGS 239
Query: 241 RSP-----GRRGGRSRSPGARRRSPVRESSVERRAKIEQWNREKEQ 281
R GRR P R RSPVRESS ERRAKIEQWNRE+++
Sbjct: 240 RHERYDDGGRRRHGGSPPPRRARSPVRESSEERRAKIEQWNRERDE 285
>gi|195615822|gb|ACG29741.1| splicing factor U2af 38 kDa subunit [Zea mays]
Length = 307
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 199/323 (61%), Positives = 225/323 (69%), Gaps = 62/323 (19%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P+ISPTL+L+NMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLVLANMYQRPDMITP 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
GVD QGQ +DP K+Q+HFEDFYED++EEL K+GEIE+LN+CDNLADHM+GNVYVQFREEE
Sbjct: 61 GVDAQGQPIDPEKMQEHFEDFYEDIYEELGKFGEIENLNVCDNLADHMIGNVYVQFREEE 120
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
AA A L GRFY+GRPIIV++SPVTDFREATCRQ+EEN CNRGGYCNFMH+K+I R+L
Sbjct: 121 QAAAAYNALQGRFYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGRDL 180
Query: 181 RRRLFGRSRRRRSRSRSRSRSP-------------------------------HKYRGGY 209
RR+L+GRS RR RSRSRSP Y
Sbjct: 181 RRKLYGRSASRRYHGRSRSRSPPPQRRDHRDRDDYHHRDRDDYRGGGGGGRGRGSRYDRY 240
Query: 210 EERSH----------GGGRGSGRRD--DDRDHRLHGRGRRPRSRSPGRRGGRSRSPGARR 257
++ + G GRG GR D DD R HG SP R
Sbjct: 241 DDGAGRGGRHGRYDDGAGRG-GRHDRYDDGGRRRHG------------------SPSRRA 281
Query: 258 RSPVRESSVERRAKIEQWNREKE 280
RSPVRESS ERRAKIEQWNRE+E
Sbjct: 282 RSPVRESSEERRAKIEQWNRERE 304
>gi|297740057|emb|CBI30239.3| unnamed protein product [Vitis vinifera]
Length = 191
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 174/179 (97%), Positives = 178/179 (99%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDM+TP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMVTP 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
GVDPQGQ LDPRKIQ+HFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE
Sbjct: 61 GVDPQGQPLDPRKIQEHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEEN+CNRGGYCNFMHLKKISR+
Sbjct: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENICNRGGYCNFMHLKKISRQ 179
>gi|224086130|ref|XP_002307825.1| predicted protein [Populus trichocarpa]
gi|222857274|gb|EEE94821.1| predicted protein [Populus trichocarpa]
Length = 272
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 196/289 (67%), Positives = 219/289 (75%), Gaps = 27/289 (9%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P+ISPTLLLSN Y RPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNTYHRPDMITP 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
GVD QGQ LDP KIQ+HFEDFYED+FEELSK+GEIE+LN+CDNLADHM+GNVYVQF+EE+
Sbjct: 61 GVDAQGQPLDPHKIQEHFEDFYEDIFEELSKFGEIENLNVCDNLADHMIGNVYVQFKEED 120
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
AA AL++L GRFY+GRPII DFSPVTDFREATCRQYEEN CNRGGYCNFMH+K I ++L
Sbjct: 121 QAAAALQSLQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKLIGKDL 180
Query: 181 RRRLFGRSR-------RRRSRSRSRSRSPHKYRGGYEERSHGGGRGSGRRDDDRDHRLHG 233
RR+LFGR R R RS S R + R RG+GRR+D
Sbjct: 181 RRKLFGRYRGYRVSRSRSRSVSPRRRDRDYDRRERDYRDRDRDYRGNGRRND-------- 232
Query: 234 RGRRPRSRSPGRRGGRSRSPGARR-RSPVRESSVERRAKIEQWNREKEQ 281
R GGR R RR RSPVRE S ERRA+IEQWNRE+E+
Sbjct: 233 -----------RDGGRKRHGSPRRSRSPVREGSEERRARIEQWNREREE 270
>gi|294461365|gb|ADE76244.1| unknown [Picea sitchensis]
Length = 290
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 198/291 (68%), Positives = 224/291 (76%), Gaps = 7/291 (2%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +PSISPTLLLSNMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPSISPTLLLSNMYQRPDMITP 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
G+DPQGQA+DPRKIQ+HFEDF+ED+FEELSK+GEIE+LNICDNLADHMVGNVYVQFREEE
Sbjct: 61 GLDPQGQAMDPRKIQEHFEDFFEDIFEELSKFGEIENLNICDNLADHMVGNVYVQFREEE 120
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
AA AL+ + GRFY+GRPIIVDFSPVTDFREATCRQ+EEN CNRGGYCNFMH+KKI+++L
Sbjct: 121 QAAAALKAMQGRFYSGRPIIVDFSPVTDFREATCRQFEENNCNRGGYCNFMHVKKINKDL 180
Query: 181 RRRLFGRSRRRRSRSRSRSRSPHKYRGGYEERSHGG--GRGSGRRDDDRDHRLHGRGRRP 238
RR+LFGR RR R RG+GRR +DRD+R R R
Sbjct: 181 RRKLFGRFRRFRGGRSRSRSRSLSPLPPPPPSRSRRYDDRGNGRRYEDRDYRSSDRDER- 239
Query: 239 RSRSPGRRGGRSRSPGARRRSPVRESSVERRAKIEQWNREKEQADSGNKVD 289
G R RSP R+ S ERRA+IEQWNRE+E ++ + D
Sbjct: 240 ----RGSVKRTRSRSPRRNRSPARDGSAERRARIEQWNRERESQNASSAYD 286
>gi|224068961|ref|XP_002326241.1| predicted protein [Populus trichocarpa]
gi|222833434|gb|EEE71911.1| predicted protein [Populus trichocarpa]
Length = 209
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 174/182 (95%), Positives = 178/182 (97%), Gaps = 2/182 (1%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKP+ISPTLLLSNMYQRPDM+TP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPTISPTLLLSNMYQRPDMLTP 60
Query: 61 GVDPQGQA--LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFRE 118
GVDPQ Q+ LDPRKIQDHFEDFYEDLFEELSKYG+IESLNICDNLADHMVGNVYVQFRE
Sbjct: 61 GVDPQAQSQSLDPRKIQDHFEDFYEDLFEELSKYGDIESLNICDNLADHMVGNVYVQFRE 120
Query: 119 EEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISR 178
EEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISR
Sbjct: 121 EEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISR 180
Query: 179 EL 180
L
Sbjct: 181 WL 182
>gi|15239067|ref|NP_199096.1| Splicing factor U2af small subunit B [Arabidopsis thaliana]
gi|42573547|ref|NP_974870.1| Splicing factor U2af small subunit B [Arabidopsis thaliana]
gi|75334092|sp|Q9FMY5.1|U2AFB_ARATH RecName: Full=Splicing factor U2af small subunit B; AltName:
Full=U2 auxiliary factor 35 kDa subunit B; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
small subunit B; Short=U2 snRNP auxiliary factor small
subunit B; AltName: Full=Zinc finger CCCH
domain-containing protein 60; Short=AtC3H60
gi|10177285|dbj|BAB10638.1| U2 snRNP auxiliary factor, small subunit [Arabidopsis thaliana]
gi|22531195|gb|AAM97101.1| U2 snRNP auxiliary factor small subunit [Arabidopsis thaliana]
gi|23198022|gb|AAN15538.1| U2 snRNP auxiliary factor small subunit [Arabidopsis thaliana]
gi|332007485|gb|AED94868.1| Splicing factor U2af small subunit B [Arabidopsis thaliana]
gi|332007486|gb|AED94869.1| Splicing factor U2af small subunit B [Arabidopsis thaliana]
Length = 283
Score = 369 bits (947), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 203/289 (70%), Positives = 223/289 (77%), Gaps = 14/289 (4%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P+ISPTLLLSNMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
GVDPQGQ LDP KIQDHFEDFYED+FEEL+K+GE+ESLN+CDNLADHM+GNVYV F+EE+
Sbjct: 61 GVDPQGQPLDPSKIQDHFEDFYEDIFEELNKFGEVESLNVCDNLADHMIGNVYVLFKEED 120
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
HAA AL+ L GRFY+GRPII DFSPVTDFREATCRQYEEN CNRGGYCNFMH+K+ISREL
Sbjct: 121 HAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKQISREL 180
Query: 181 RRRLFGRSRRRRSRSRSRSRSPHKYRGGYEERSHGGGRGSGRRDDDRDHRLHGRGRRPRS 240
RR+LFGR RR R R E H R G D RD HG G+R
Sbjct: 181 RRKLFGRYRRSYRRGSRSRSRSISPRRKRE---HSRERERG---DVRDRDRHGNGKRSSD 234
Query: 241 RSP-----GRRGGRSRSPGARRRSP--VRESSVERRAKIEQWNREKEQA 282
RS G R SP R RSP VRE S ERRA+IEQWNRE+++
Sbjct: 235 RSERHDRDGGGRRRHGSP-KRSRSPRNVREGSEERRARIEQWNRERDEG 282
>gi|297791697|ref|XP_002863733.1| hypothetical protein ARALYDRAFT_494737 [Arabidopsis lyrata subsp.
lyrata]
gi|297309568|gb|EFH39992.1| hypothetical protein ARALYDRAFT_494737 [Arabidopsis lyrata subsp.
lyrata]
Length = 280
Score = 368 bits (945), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 203/287 (70%), Positives = 222/287 (77%), Gaps = 14/287 (4%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P+ISPTLLLSNMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
GVDPQGQ LDP KIQDHFEDFYED+FEEL+K+GE+ESLN+CDNLADHM+GNVYV F+EE+
Sbjct: 61 GVDPQGQPLDPSKIQDHFEDFYEDIFEELNKFGEVESLNVCDNLADHMIGNVYVLFKEED 120
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
HAA AL+ L GRFY+GRPII DFSPVTDFREATCRQYEEN CNRGGYCNFMH+K+ISREL
Sbjct: 121 HAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKQISREL 180
Query: 181 RRRLFGRSRRRRSRSRSRSRSPHKYRGGYEERSHGGGRGSGRRDDDRDHRLHGRGRRPRS 240
RR+LFGR RR R R E H R G D RD HG G+R
Sbjct: 181 RRKLFGRYRRSYRRGSRSRSRSISPRRKRE---HSRERERG---DLRDRDRHGNGKRSSD 234
Query: 241 RSP-----GRRGGRSRSPGARRRSP--VRESSVERRAKIEQWNREKE 280
RS G R SP R RSP VRE S ERRA+IEQWNRE++
Sbjct: 235 RSERHDRDGGGRRRHGSP-KRSRSPRNVREGSEERRARIEQWNRERD 280
>gi|356574563|ref|XP_003555415.1| PREDICTED: splicing factor U2af small subunit A-like [Glycine max]
Length = 268
Score = 366 bits (940), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 192/281 (68%), Positives = 208/281 (74%), Gaps = 15/281 (5%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +PSISPTLLLSNMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPSISPTLLLSNMYQRPDMITP 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
GVDPQGQ LDPRKIQ HFEDFYED+F EL+K+GEIESLN+CDNLADHM+GNVYVQFREE+
Sbjct: 61 GVDPQGQTLDPRKIQQHFEDFYEDIFTELAKFGEIESLNVCDNLADHMIGNVYVQFREED 120
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
AA AL L GRFY RPII DFSPVTDFREATCRQ+EEN CNRGGYCNFMH+K I R+L
Sbjct: 121 QAAKALHALRGRFYNARPIIADFSPVTDFREATCRQFEENSCNRGGYCNFMHVKLIGRDL 180
Query: 181 RRRLFGRSRRRRSRSRSRSRSPHKYRGGYEERSHGGGRGSGRRDDDRDHRLHGRGRRPRS 240
RRRLFGR+ R S + R R R S R R G
Sbjct: 181 RRRLFGRNHRGGSGTYHRVSRSRSRSRSASPRYRRERRESDSRGGRRSRERDG------- 233
Query: 241 RSPGRRGGRSRSPGARRRSPVRESSVERRAKIEQWNREKEQ 281
GGR R G+ P RE S ERRA+IEQWNRE+E+
Sbjct: 234 -----SGGRRRQHGS---PPAREGSEERRARIEQWNREREE 266
>gi|297727107|ref|NP_001175917.1| Os09g0491756 [Oryza sativa Japonica Group]
gi|75338870|sp|Q9ZQW8.1|U2AFA_ORYSJ RecName: Full=Splicing factor U2af small subunit A; AltName:
Full=U2 auxiliary factor 35 kDa subunit A; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
small subunit A; Short=U2 snRNP auxiliary factor small
subunit A; AltName: Full=Zinc finger CCCH
domain-containing protein 60; Short=OsC3H60
gi|3850818|emb|CAA77133.1| U2 snRNP auxiliary factor, small subunit [Oryza sativa]
gi|125564203|gb|EAZ09583.1| hypothetical protein OsI_31864 [Oryza sativa Indica Group]
gi|125606167|gb|EAZ45203.1| hypothetical protein OsJ_29848 [Oryza sativa Japonica Group]
gi|215692945|dbj|BAG88365.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215704518|dbj|BAG94151.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255679017|dbj|BAH94645.1| Os09g0491756 [Oryza sativa Japonica Group]
Length = 290
Score = 365 bits (938), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 198/307 (64%), Positives = 221/307 (71%), Gaps = 44/307 (14%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH KPS+SPTLLLSNMY RPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNKPSVSPTLLLSNMYLRPDMITP 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
G+D QG +DP KIQ FEDFYED+FEELSKYGEIESL++CDN ADHM+GNVYVQFREE+
Sbjct: 61 GIDAQGNPIDPEKIQADFEDFYEDIFEELSKYGEIESLHVCDNFADHMIGNVYVQFREED 120
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
AA AL+ L GR+Y+GRPIIV+FSPV+DFREATCRQYEEN CNRGGYCNFMH+K+I R+L
Sbjct: 121 QAARALQALTGRYYSGRPIIVEFSPVSDFREATCRQYEENSCNRGGYCNFMHVKEIGRDL 180
Query: 181 RRRLFG---RSRRRRSRSRSRSRSPHK-------------------YRGGYEERSHGGGR 218
R+RLFG RSRR S RSRS SP+ YRGG + GG R
Sbjct: 181 RKRLFGHLHRSRRSHSHGRSRSPSPYHYRRDYDRRSSSRSRDHDDYYRGGSHDYYRGGSR 240
Query: 219 GSGRRDD---DRDHRLHGRGRRPRSRSPGRRGGRSRSPGARRRSPVRESSVERRAKIEQW 275
S R D D G R +R RSPVR+ S ERRA+IEQW
Sbjct: 241 RSSERHRSSYDSD-------------------GSRRRHRSRTRSPVRDGSEERRAQIEQW 281
Query: 276 NREKEQA 282
NRE+E A
Sbjct: 282 NREREAA 288
>gi|357135864|ref|XP_003569528.1| PREDICTED: splicing factor U2af small subunit B-like isoform 1
[Brachypodium distachyon]
gi|357135866|ref|XP_003569529.1| PREDICTED: splicing factor U2af small subunit B-like isoform 2
[Brachypodium distachyon]
gi|357135868|ref|XP_003569530.1| PREDICTED: splicing factor U2af small subunit B-like isoform 3
[Brachypodium distachyon]
Length = 281
Score = 365 bits (938), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 187/282 (66%), Positives = 213/282 (75%), Gaps = 5/282 (1%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSR+H +P+ISPT++L NMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRIHNRPTISPTIVLMNMYQRPDMITP 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
GVD QGQ +DPRK+Q+HFEDFYED+FEELSK+GEIE+LN+CDNL+DHM+GNVYVQFREE+
Sbjct: 61 GVDAQGQPIDPRKMQEHFEDFYEDIFEELSKFGEIETLNVCDNLSDHMIGNVYVQFREED 120
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
AA A L GRFY+GR IIVDFSPVTDFREATCRQYEEN C RGG+CNFMH+K+I ++L
Sbjct: 121 QAAAAHTALQGRFYSGRLIIVDFSPVTDFREATCRQYEENTCTRGGHCNFMHVKQIGKDL 180
Query: 181 RRRLFGRSRRRRSRSRSRSRSPHKYRGGYEERSHGGGRGSGRRDDDRDHRLHGRGRRPRS 240
R++LFGR RR H+ + G R G R R
Sbjct: 181 RKKLFGRYRRSHRGRSRSPSPHHRRERRDRDDYRGRDDYRRGGGGGGGGRRGGSSRNERH 240
Query: 241 RSPGRR--GGRSRSPGARRRSPVRESSVERRAKIEQWNREKE 280
GRR GG SP R RSPVRE+S ERRAKIEQWNREKE
Sbjct: 241 DDGGRRRYGG---SPPRRARSPVRENSEERRAKIEQWNREKE 279
>gi|312282783|dbj|BAJ34257.1| unnamed protein product [Thellungiella halophila]
Length = 308
Score = 363 bits (932), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 206/309 (66%), Positives = 227/309 (73%), Gaps = 27/309 (8%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P+ISPTLLLSNMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
GVD QGQ LDPRKIQ+HFEDF+EDLFEEL K+GEIESLNICDNLADHM+GNVYVQF+EE+
Sbjct: 61 GVDAQGQPLDPRKIQEHFEDFFEDLFEELGKFGEIESLNICDNLADHMIGNVYVQFKEED 120
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
AA AL+ L GRFY+GRPII DFSPVTDFREATCRQYEEN CNRGGYCNFMH+K +SREL
Sbjct: 121 QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKLVSREL 180
Query: 181 RRRLFGRSRRRRSRSRSRSR---SP-HKYRGGYEERSHGGGRGSGRRDDDRDHRLHGRGR 236
RR+LFGR RR R SP HK + SH R RD DR+ HG G+
Sbjct: 181 RRKLFGRYRRSYRRGSRSRSRSISPRHKREHDRRDPSH---REFSHRDRDREFYRHGSGK 237
Query: 237 RPRSRS-----PGRRGGRSRSPGARRRSPVRESSV---------------ERRAKIEQWN 276
R RS G RG R S G R S R S ERRA+IEQWN
Sbjct: 238 RSSERSERGDREGSRGDREGSRGDREGSRRRHESSPKRGGSPGGGREGSEERRARIEQWN 297
Query: 277 REKEQADSG 285
RE+E+ ++G
Sbjct: 298 REREEKEAG 306
>gi|15723293|gb|AAL06332.1|AF409140_1 U2 auxiliary factor small subunit [Arabidopsis thaliana]
Length = 283
Score = 362 bits (929), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 201/289 (69%), Positives = 221/289 (76%), Gaps = 14/289 (4%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P+ISPTLLLSNMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
GVDPQGQ LDP KIQDHFEDFYED+FEEL+K+GE+ESLN+C NLADHM+GNVYV F+EE+
Sbjct: 61 GVDPQGQPLDPSKIQDHFEDFYEDIFEELNKFGEVESLNVCVNLADHMIGNVYVLFKEED 120
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
HAA AL+ L GRFY+GRPII DFSPVTDFREATCRQYEEN CNRGG CNFMH+K+ISREL
Sbjct: 121 HAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENSCNRGGCCNFMHVKQISREL 180
Query: 181 RRRLFGRSRRRRSRSRSRSRSPHKYRGGYEERSHGGGRGSGRRDDDRDHRLHGRGRRPRS 240
RR+LFGR RR R R E H R G D RD HG G+R
Sbjct: 181 RRKLFGRYRRSYRRGSRSRSRSISPRRKRE---HSRERERG---DVRDRDRHGNGKRSSD 234
Query: 241 RSP-----GRRGGRSRSPGARRRSP--VRESSVERRAKIEQWNREKEQA 282
RS G R SP R RSP VRE S ERRA+IEQWNRE+++
Sbjct: 235 RSERYDRDGGGRRRHGSP-KRSRSPRNVREGSEERRARIEQWNRERDEG 282
>gi|255539352|ref|XP_002510741.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus
communis]
gi|223551442|gb|EEF52928.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus
communis]
Length = 272
Score = 362 bits (928), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 197/281 (70%), Positives = 218/281 (77%), Gaps = 11/281 (3%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P+ISPTLLLSNMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
GVD QGQ +DPRKIQ+HFEDFYED+FEEL K+GEIESLN+CDNLADHM+GNVYVQFREE+
Sbjct: 61 GVDAQGQPIDPRKIQEHFEDFYEDIFEELGKFGEIESLNVCDNLADHMIGNVYVQFREED 120
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
AA AL+ L GRFY+GRPII DFSPVTDFREATCRQ+EEN CNRGGYCNFMH+K I R+L
Sbjct: 121 QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 180
Query: 181 RRRLFGRSRRRRSRSRSRSRSPHKYRGGYEERSHGGGRGSGRRDDDRDHRLHGRGRRPRS 240
RR+LFGR R R+ E+S+ R D RD G GRR
Sbjct: 181 RRKLFGRYRGYRASRSRSRSVSPSRH--RREKSN-----DRRERDYRDRDYRGNGRRSGD 233
Query: 241 RSPGRRGGRSRSPGARRRSPVRESSVERRAKIEQWNREKEQ 281
R RR G R R RSPVRE S ERRA+IEQWNRE+E+
Sbjct: 234 RHDRRRHGSPR----RSRSPVREGSEERRARIEQWNREREE 270
>gi|326498815|dbj|BAK02393.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 281
Score = 361 bits (927), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 186/282 (65%), Positives = 214/282 (75%), Gaps = 5/282 (1%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSR+H +P+ISPT++L NMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRIHNRPTISPTIVLMNMYQRPDMITP 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
GVD QGQ +DPRK+Q+HFEDFYED+FEELSK+GEIE+LN+CDNL+DHM+GNVYVQFREE+
Sbjct: 61 GVDAQGQPIDPRKMQEHFEDFYEDIFEELSKFGEIETLNVCDNLSDHMIGNVYVQFREED 120
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
AA A L GRFY+GR IIVDFSPVTDFREATCRQYEEN C RGG+CNFMH+K+I ++L
Sbjct: 121 QAAAAHTALQGRFYSGRLIIVDFSPVTDFREATCRQYEENTCTRGGHCNFMHVKQIGKDL 180
Query: 181 RRRLFGRSRRRRSRSRSRSRSPHKYRGGYEERSHGGGRGSGRRDDDRDHRLHGRGRRPRS 240
R++LFGR RR + H+ + G R G R R
Sbjct: 181 RKKLFGRYRRSQRGRSRSPSPHHRRERRDRDDYRGRDDFRRGGGGGGGGRRGGSSRHERH 240
Query: 241 RSPGRR--GGRSRSPGARRRSPVRESSVERRAKIEQWNREKE 280
GRR GG SP R RSPVRE+S ERRAKIEQWNRE+E
Sbjct: 241 DDGGRRRYGG---SPPRRARSPVRENSEERRAKIEQWNRERE 279
>gi|3850819|emb|CAA77134.1| U2 snRNP auxiliary factor, small subunit [Oryza sativa]
Length = 274
Score = 360 bits (923), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 193/285 (67%), Positives = 216/285 (75%), Gaps = 16/285 (5%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH KPS+SPTLLLSNMY RPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNKPSVSPTLLLSNMYLRPDMITP 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
G+D QG +DP KIQ FEDFYED+FEELSKYGEIESL++CDN ADHM+GNVYVQFREE+
Sbjct: 61 GIDAQGNPIDPEKIQADFEDFYEDIFEELSKYGEIESLHVCDNFADHMIGNVYVQFREED 120
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
AA AL+ L GR+Y+GRPIIV+FSPV+DFREATCRQYEEN CNRGGYCNFMH+K+I R+L
Sbjct: 121 QAARALQALTGRYYSGRPIIVEFSPVSDFREATCRQYEENSCNRGGYCNFMHVKEIGRDL 180
Query: 181 RRRLFG---RSRRRRSRSRSRSRSPHKYRGGYEERSHGGGRGSGRRDDDRDHRLHGRGRR 237
R+RLFG RSRR S RSRS SP+ YR Y+ RS R H +
Sbjct: 181 RKRLFGHLHRSRRSHSHGRSRSPSPYHYRRDYDRRSSSRSRDHDDYYRGGSHDYY----- 235
Query: 238 PRSRSPGRRGGRSRSPGARRRSPVRESSVERRAKIEQWNREKEQA 282
RGG RS R S + S ERRA+IEQWNRE+E A
Sbjct: 236 --------RGGSRRSSERHRSSYDSDGSEERRAQIEQWNREREAA 272
>gi|326528149|dbj|BAJ89126.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 314
Score = 358 bits (918), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 191/296 (64%), Positives = 222/296 (75%), Gaps = 24/296 (8%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH KPS+SPTLLL NMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNKPSVSPTLLLCNMYQRPDMITP 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
GVD QG ++P KIQ FEDFYED+F+ELSK+GE+E+L++CDNLADH++GNVYVQFREE+
Sbjct: 61 GVDAQGNPINPVKIQGDFEDFYEDIFDELSKHGEVENLHVCDNLADHLIGNVYVQFREED 120
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
AA AL+ L GRFY+GRPII +FSPVTDFREATCRQ+EE+ CNRGGYCNFMH+K+I R+L
Sbjct: 121 QAAKALQALQGRFYSGRPIIAEFSPVTDFREATCRQFEEHNCNRGGYCNFMHVKQIGRDL 180
Query: 181 RRRLFGR----------------SRRRRSRSRSRSRSPHKYRGGYEERSHGGGRGSGRRD 224
R+RL+G R +R R RS S K RG Y +G GS R
Sbjct: 181 RKRLYGHLHSSRRSHSRSSRSPSPYRHHARDRDRS-SRSKDRGDY----YG---GSLDRG 232
Query: 225 DDRDHRLHGRGRRPRSRSPGRRGGRSRSPGARRRSPVRESSVERRAKIEQWNREKE 280
D D+ H R R+R+ G R R +R RSPVRE S ERRAKIEQWNRE++
Sbjct: 233 DYGDYYHHSRRSSERNRNYDSDGSRRRRHRSRTRSPVREGSEERRAKIEQWNRERD 288
>gi|68036691|gb|AAY84879.1| U2AF small subunit [Triticum aestivum]
Length = 314
Score = 358 bits (918), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 190/288 (65%), Positives = 218/288 (75%), Gaps = 8/288 (2%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH KPS+SPTLLL NMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNKPSVSPTLLLCNMYQRPDMITP 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
GVD QG +DP KIQ FEDFYED+F+ELSK+GE+E+L++CDNLADH++GNVYVQFREE+
Sbjct: 61 GVDAQGNPIDPVKIQGDFEDFYEDIFDELSKHGEVENLHVCDNLADHLIGNVYVQFREED 120
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
AA AL+ L GRFY+GRPII +FSPVTDFREATCRQ+EE+ CNRGGYCNFMH+K+I R+L
Sbjct: 121 QAAKALQALQGRFYSGRPIIAEFSPVTDFREATCRQFEEHNCNRGGYCNFMHVKEIGRDL 180
Query: 181 RRRLFGRSRRRRSRSRSRSRSPHKYRGGYEERSHGGGR--------GSGRRDDDRDHRLH 232
R+RL+G R SRSP YR +R GS R D D+ H
Sbjct: 181 RKRLYGHLHRSGRSHSRSSRSPSPYRHHARDRDRSSRSRDRGDYYGGSLDRGDYGDYYHH 240
Query: 233 GRGRRPRSRSPGRRGGRSRSPGARRRSPVRESSVERRAKIEQWNREKE 280
R R+R+ G R R +R RSPVRE S ERRAKIEQWNRE+E
Sbjct: 241 SRRSSERNRNYDSDGSRCRRHRSRTRSPVREGSEERRAKIEQWNRERE 288
>gi|15217666|ref|NP_174086.1| splicing factor U2af small subunit A [Arabidopsis thaliana]
gi|75336807|sp|Q9S709.1|U2AFA_ARATH RecName: Full=Splicing factor U2af small subunit A; AltName:
Full=U2 auxiliary factor 35 kDa subunit A; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
small subunit A; Short=U2 snRNP auxiliary factor small
subunit A; AltName: Full=Zinc finger CCCH
domain-containing protein 8; Short=AtC3H8
gi|5668775|gb|AAD46002.1|AC005916_14 Strong similarity to gb|Y18349 U2 snRNP auxiliary factor, small
subunit from Oryza sativa. ESTs gb|AA586295 and
gb|AA597332 come from this gene [Arabidopsis thaliana]
gi|6693017|gb|AAF24943.1|AC012375_6 T22C5.10 [Arabidopsis thaliana]
gi|12744991|gb|AAK06875.1|AF344324_1 putative U2 snRNP auxiliary factor [Arabidopsis thaliana]
gi|17528936|gb|AAL38678.1| putative U2 snRNP auxiliary factor [Arabidopsis thaliana]
gi|19699275|gb|AAL91249.1| At1g27650/T22C5_2 [Arabidopsis thaliana]
gi|20465943|gb|AAM20157.1| putative U2 snRNP auxiliary factor protein [Arabidopsis thaliana]
gi|21595106|gb|AAM66073.1| putative U2 snRNP auxiliary factor [Arabidopsis thaliana]
gi|21689611|gb|AAM67427.1| At1g27650/T22C5_2 [Arabidopsis thaliana]
gi|332192737|gb|AEE30858.1| splicing factor U2af small subunit A [Arabidopsis thaliana]
Length = 296
Score = 356 bits (914), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 196/287 (68%), Positives = 213/287 (74%), Gaps = 13/287 (4%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P+ISPTLLLSNMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
GVD QGQ LDPRKIQ+HFEDF+EDLFEEL K+GEIESLNICDNLADHM+GNVYVQF+EE+
Sbjct: 61 GVDAQGQPLDPRKIQEHFEDFFEDLFEELGKFGEIESLNICDNLADHMIGNVYVQFKEED 120
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
AA AL+ L GRFY+GRPII DFSPVTDFREATCRQYEEN CNRGGYCNFMH+K +SREL
Sbjct: 121 QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKLVSREL 180
Query: 181 RRRLFGRSRRRRSRSRSRSR-----SPHKYRGGYEERSHGGGRGSGRRDDDRDHRLHGRG 235
RR+LFGR RR R SP R +R R RD DR+ HG G
Sbjct: 181 RRKLFGRYRRSYRRGSRSRSRSRSISPRNKRDN--DRRDPSHREFSHRDRDREFYRHGSG 238
Query: 236 RRPRSRSP-----GRRGGRSRSPGARRRSPVRESSV-ERRAKIEQWN 276
+R RS G RG R SP ERRA+IEQWN
Sbjct: 239 KRSSERSERQERDGSRGRRQASPKRGGSPGGGREGSEERRARIEQWN 285
>gi|297845720|ref|XP_002890741.1| hypothetical protein ARALYDRAFT_472969 [Arabidopsis lyrata subsp.
lyrata]
gi|297336583|gb|EFH67000.1| hypothetical protein ARALYDRAFT_472969 [Arabidopsis lyrata subsp.
lyrata]
Length = 296
Score = 355 bits (910), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 198/299 (66%), Positives = 215/299 (71%), Gaps = 37/299 (12%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P+ISPTLLLSNMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
GVD QGQ LDPRKIQ+HFEDF+EDLFEEL K+GEIESLNICDNLADHM+GNVYVQF+EE+
Sbjct: 61 GVDAQGQPLDPRKIQEHFEDFFEDLFEELGKFGEIESLNICDNLADHMIGNVYVQFKEED 120
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
AA AL+ L GRFY+GRPII DFSPVTDFREATCRQYEEN CNRGGYCNFMH+K +SREL
Sbjct: 121 QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKLVSREL 180
Query: 181 RRRLFGRSRR-----------------RRSRSRSRSRSPHKYRGGYEERSHGGGRGSGRR 223
RR+LFGR RR R R R PH+ E SH R
Sbjct: 181 RRKLFGRYRRSYRRGSRSRSRSRSISPRNKREYDRRDPPHR------EFSH--------R 226
Query: 224 DDDRDHRLHGRGRRPRSRSP-----GRRGGRSRSPGARRRSPVRESSV-ERRAKIEQWN 276
D DR+ HG G+R RS G RG R SP ERRA+IEQWN
Sbjct: 227 DRDREFYRHGSGKRSSERSERQERDGSRGRRQASPKRGGSPGGGREGSEERRARIEQWN 285
>gi|195622372|gb|ACG33016.1| splicing factor U2af 38 kDa subunit [Zea mays]
gi|195639644|gb|ACG39290.1| splicing factor U2af 38 kDa subunit [Zea mays]
Length = 284
Score = 354 bits (908), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 188/283 (66%), Positives = 211/283 (74%), Gaps = 2/283 (0%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH KPSISPTLLL NMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNKPSISPTLLLCNMYQRPDMITP 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
GVD QG +DP +IQ+ FEDFYED+F ELSK+GEIESL++CDNLADHM+GNVYV+FREEE
Sbjct: 61 GVDAQGNPIDPERIQEDFEDFYEDIFVELSKHGEIESLHVCDNLADHMIGNVYVEFREEE 120
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
AA AL+ L GR+Y+GRPII +FSPVTDFREATCRQ+EE+ CNRGGYCNFMH+K++ R+L
Sbjct: 121 QAARALQALQGRYYSGRPIIAEFSPVTDFREATCRQFEEHSCNRGGYCNFMHVKQVGRDL 180
Query: 181 RRRLFGRSRRR-RSRSRSRSRSPHKYRGGYEERSHGGGRGSGRRDDDRDHRLHGRGRRPR 239
RR+LFG R RS SR SRSP YR + R R
Sbjct: 181 RRKLFGHLHRSLRSHSRG-SRSPSPYRRRGSSSRSRDRDDYYYYNYRSGSGSRRSSERHR 239
Query: 240 SRSPGRRGGRSRSPGARRRSPVRESSVERRAKIEQWNREKEQA 282
S R +R RSPVRE S ERRAKIEQWNRE+E A
Sbjct: 240 SHDSDGSRRRRGRSRSRSRSPVREGSEERRAKIEQWNREREAA 282
>gi|224132068|ref|XP_002328177.1| predicted protein [Populus trichocarpa]
gi|222837692|gb|EEE76057.1| predicted protein [Populus trichocarpa]
Length = 179
Score = 353 bits (907), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 162/178 (91%), Positives = 170/178 (95%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPS+SPTLLLSNMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSVSPTLLLSNMYQRPDMITP 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
GVD QG +DPR+IQ HFE+FYEDLFEEL KYGEIESLN+CDNLADHMVGNVYVQFREEE
Sbjct: 61 GVDAQGNPIDPRRIQQHFEEFYEDLFEELRKYGEIESLNVCDNLADHMVGNVYVQFREEE 120
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISR 178
HA+NAL+NL GRFYAGRPIIVDFSPVTDFREATCRQYEEN CNRGGYCNFMHLK+I R
Sbjct: 121 HASNALKNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENACNRGGYCNFMHLKRIGR 178
>gi|356521086|ref|XP_003529189.1| PREDICTED: splicing factor U2af small subunit A-like isoform 1
[Glycine max]
gi|356521088|ref|XP_003529190.1| PREDICTED: splicing factor U2af small subunit A-like isoform 2
[Glycine max]
gi|356521090|ref|XP_003529191.1| PREDICTED: splicing factor U2af small subunit A-like isoform 3
[Glycine max]
Length = 271
Score = 353 bits (905), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 162/190 (85%), Positives = 174/190 (91%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +PSISPTLLLSNMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPSISPTLLLSNMYQRPDMITP 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
GVDPQGQ LDPRKIQ HFEDFYED+F EL+K+G+IESLN+CDNLADHM+GNVYVQFREE+
Sbjct: 61 GVDPQGQPLDPRKIQQHFEDFYEDIFTELAKFGDIESLNVCDNLADHMIGNVYVQFREED 120
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
AA AL L+GRFY RPII DFSPVTDFREATCRQ+EEN CNRGGYCNFMH+K I R+L
Sbjct: 121 QAAKALHALHGRFYNARPIIADFSPVTDFREATCRQFEENSCNRGGYCNFMHVKLIGRDL 180
Query: 181 RRRLFGRSRR 190
RRRLFGR R
Sbjct: 181 RRRLFGRHHR 190
>gi|224061819|ref|XP_002300614.1| predicted protein [Populus trichocarpa]
gi|222842340|gb|EEE79887.1| predicted protein [Populus trichocarpa]
Length = 273
Score = 352 bits (903), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 187/292 (64%), Positives = 212/292 (72%), Gaps = 32/292 (10%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P+ISPTLLLSNMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
GVD QGQ LDP KIQ+HFE+FYED+FEEL+K+GEIESLN+CDNLADHM+GNVYV F+EE+
Sbjct: 61 GVDAQGQPLDPHKIQEHFEEFYEDIFEELNKFGEIESLNVCDNLADHMIGNVYVLFKEED 120
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
AA AL+ L GRFY+GRPII DFSPVTDFREATCRQ+EEN CNRGGYCNFMH+K I R+L
Sbjct: 121 QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 180
Query: 181 RRRLFGRSR-----------RRRSRSRSRSRSPHKYRGGYEERSHGGGRGSGRRDDDRDH 229
RR+LFGR R + + + RG+GRR+D D
Sbjct: 181 RRKLFGRYRGYRVSRSRSRSVSPRKRERDYDRRERDYRDRDRDRDRDYRGNGRRNDKYD- 239
Query: 230 RLHGRGRRPRSRSPGRRGGRSRSPGARRRSPVRESSVERRAKIEQWNREKEQ 281
R GGR R S VRE S ERRA+IEQWNRE+E+
Sbjct: 240 ---------------REGGRKRHG-----STVREGSEERRARIEQWNREREE 271
>gi|225457677|ref|XP_002276502.1| PREDICTED: splicing factor U2af small subunit B isoform 1 [Vitis
vinifera]
gi|359491881|ref|XP_003634337.1| PREDICTED: splicing factor U2af small subunit B isoform 2 [Vitis
vinifera]
Length = 272
Score = 352 bits (903), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 195/285 (68%), Positives = 217/285 (76%), Gaps = 19/285 (6%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P+ISPTLLLSNMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
GVD QGQ +DPRKIQ+HFEDFYED+FEEL K+GEIESLN+CDNLADHM+GNVYVQF+EEE
Sbjct: 61 GVDAQGQPIDPRKIQEHFEDFYEDIFEELGKFGEIESLNVCDNLADHMIGNVYVQFKEEE 120
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
AA AL+ L GRFY+GRPII DFSPVTDFREATCRQ+EEN CNRGGYCNFMH+K I R+L
Sbjct: 121 QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 180
Query: 181 RRRLFGRSRRRRSRSRSRSRSPHKYRGGYEERSHGGG---RGSGRRDDDRDHRLHGRGRR 237
RR+LFGR +YR + R G RG+GRR D+
Sbjct: 181 RRKLFGRYSGYGRSRSRSRSLSPRYRRDSDRRRSGDRGDYRGNGRRSGDKH--------- 231
Query: 238 PRSRSPGRRGGRSRSPGARR-RSPVRESSVERRAKIEQWNREKEQ 281
G GGR R RR RSPVRE S ERRA+IE WNRE+E+
Sbjct: 232 ------GSDGGRRRHGSPRRSRSPVREGSEERRARIELWNREREE 270
>gi|15723291|gb|AAL06331.1|AF409139_1 U2 auxiliary factor small subunit [Arabidopsis thaliana]
Length = 296
Score = 350 bits (898), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 194/287 (67%), Positives = 211/287 (73%), Gaps = 13/287 (4%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P+ISPTLLLSNMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
GVD QGQ LDPRKIQ+HFEDF+EDLFEEL K+GEIESLNICDNLADHM+GNVYVQF+EE+
Sbjct: 61 GVDAQGQPLDPRKIQEHFEDFFEDLFEELGKFGEIESLNICDNLADHMIGNVYVQFKEED 120
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
AA AL+ L GRFY+GRPII DFSPVTDFREATCRQYEEN C RGGYCNFMH+K +SREL
Sbjct: 121 QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCYRGGYCNFMHVKLVSREL 180
Query: 181 RRRLFGRSRRRRSRSRSRSR-----SPHKYRGGYEERSHGGGRGSGRRDDDRDHRLHGRG 235
RR+L GR RR R SP R +R R RD DR+ HG G
Sbjct: 181 RRKLSGRYRRSYRRGSRSRSRSRSISPRNKRDN--DRRDPSHREFSHRDRDREFYRHGSG 238
Query: 236 RRPRSRSP-----GRRGGRSRSPGARRRSPVRESSV-ERRAKIEQWN 276
+R RS G RG R SP ERRA+IEQWN
Sbjct: 239 KRSSERSERQERDGSRGRRQASPKRGGSPGGGREGSEERRARIEQWN 285
>gi|357438827|ref|XP_003589690.1| Splicing factor U2af small subunit B [Medicago truncatula]
gi|355478738|gb|AES59941.1| Splicing factor U2af small subunit B [Medicago truncatula]
Length = 272
Score = 349 bits (896), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 158/200 (79%), Positives = 175/200 (87%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P+ISPTLLLSNMYQRPD+ITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDIITP 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
GVDP GQ +DPR+IQ HFEDFYED+F ELSK+G +E+LN+CDNLADHM+GNVYV F+EE+
Sbjct: 61 GVDPNGQPIDPRQIQQHFEDFYEDIFTELSKFGYVETLNVCDNLADHMIGNVYVLFKEED 120
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
HAA AL +L GRFY GRPI+ DFSPVTDFREATCRQYEEN CNRGGYCNFMH+KKI REL
Sbjct: 121 HAAAALASLRGRFYEGRPILADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKKIGREL 180
Query: 181 RRRLFGRSRRRRSRSRSRSR 200
RR+LF RR R R
Sbjct: 181 RRKLFSSQRREAEAENERGR 200
>gi|168049329|ref|XP_001777116.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671559|gb|EDQ58109.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 304
Score = 346 bits (887), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 204/320 (63%), Positives = 227/320 (70%), Gaps = 40/320 (12%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDM-IT 59
MAEHLASIFGTEKDRVNCPFYFKIG CRHGDRCSRLH +P+ S TLLL+NMYQ PD
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGVCRHGDRCSRLHNRPTASQTLLLANMYQSPDAGFH 60
Query: 60 PGVDPQG--QALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFR 117
GVD G Q DPRK+Q+HFEDFYED+FEELSKYGEIE+LN+CDNLADHM+GNVYV+FR
Sbjct: 61 GGVDQHGNIQQSDPRKLQEHFEDFYEDIFEELSKYGEIENLNVCDNLADHMIGNVYVKFR 120
Query: 118 EEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIS 177
EEEHAA AL L+GRFYAGRPII+DFSPVTDFREATCRQYEEN CNRGGYCNFMHLKKIS
Sbjct: 121 EEEHAAAALNALSGRFYAGRPIILDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKKIS 180
Query: 178 RELRRRLFGRSRRRRSRSRSRSRSPHKYRGGYEERSHGGGRGSGRRDDDRDHRLHGRGRR 237
RELRR+LFG R RSRSRS SP+ R G S RR DRD RG
Sbjct: 181 RELRRKLFGNY---RRRSRSRSHSPYG-------RGEARGPPSPRRYGDRDFYDSRRGGG 230
Query: 238 PRSRSPGRRGGRS-------------RSPGARRRSPVRESSVERRAKIEQWNREKEQ--- 281
GR GR RSPGA RE S ERRAKIEQWNRE+E
Sbjct: 231 RGGGGRGRSYGRRRDRSRSRTPPRRGRSPGA------REGSAERRAKIEQWNREREVRQA 284
Query: 282 -----ADSGNKVDNSSYNDD 296
A S ++ D+++Y+++
Sbjct: 285 AETAPAGSPHRRDSAAYDNE 304
>gi|217073019|gb|ACJ84869.1| unknown [Medicago truncatula]
Length = 228
Score = 342 bits (878), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 154/185 (83%), Positives = 171/185 (92%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P+ISPTLLLSNMYQRPD+ITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDIITP 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
GVDP GQ +DPR+IQ HFEDFYED+F ELSK+G +E+LN+CDNLADHM+GNVYV F+EE+
Sbjct: 61 GVDPNGQPIDPRQIQQHFEDFYEDIFTELSKFGYVETLNVCDNLADHMIGNVYVLFKEED 120
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
HAA AL +L GRFY GRPI+ DFSPVTDFREATCRQYEEN CNRGGYCNFMH+KKI REL
Sbjct: 121 HAAAALASLRGRFYEGRPILADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKKIGREL 180
Query: 181 RRRLF 185
RR+LF
Sbjct: 181 RRKLF 185
>gi|168004337|ref|XP_001754868.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693972|gb|EDQ80322.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 283
Score = 342 bits (877), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 199/291 (68%), Positives = 216/291 (74%), Gaps = 20/291 (6%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDM-IT 59
MAEHLASIFGTEKDRVNCPFYFKIG CRHGDRCSRLH +P+ S TLLL+NMYQ PD
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGVCRHGDRCSRLHNRPTASQTLLLANMYQSPDAGFH 60
Query: 60 PGVDPQG--QALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFR 117
GVD G Q DPRK+Q+HFEDFYED+FEELSKYGEIE+LN+CDNLADHM+GNVYV+FR
Sbjct: 61 GGVDQHGNIQQSDPRKLQEHFEDFYEDIFEELSKYGEIENLNVCDNLADHMIGNVYVKFR 120
Query: 118 EEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIS 177
EEEHAA AL L+GRFYAGRPII+DFSPVTDFREATCRQYEEN CNRGGYCNFMHLKKIS
Sbjct: 121 EEEHAAAALNALSGRFYAGRPIILDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKKIS 180
Query: 178 RELRRRLFGRSRRRRSRSRSRSRSPHKYRGGYEERSHGGGRGSGRRDDDRDHRLHGRGRR 237
RELRR+LFG R RSRSRS SP+ R G S RR DRD RG
Sbjct: 181 RELRRKLFGNY---RRRSRSRSHSPYG-------RGEARGPPSPRRYGDRDFYDSRRGGG 230
Query: 238 PRSRSPGRRGGRSRSPGARR------RSP-VRESSVERRAKIEQWNREKEQ 281
GR GR R R RSP RE S ERRAKI+QWNRE+E+
Sbjct: 231 RGGGGRGRGYGRRRDRSRSRTPTRRGRSPAAREGSAERRAKIDQWNREREE 281
>gi|226502062|ref|NP_001140674.1| uncharacterized protein LOC100272749 [Zea mays]
gi|194700362|gb|ACF84265.1| unknown [Zea mays]
gi|194700522|gb|ACF84345.1| unknown [Zea mays]
gi|223975941|gb|ACN32158.1| unknown [Zea mays]
gi|407232750|gb|AFT82717.1| C3H40 C3H type transcription factor, partial [Zea mays subsp. mays]
gi|414886043|tpg|DAA62057.1| TPA: splicing factor U2af subunit isoform 1 [Zea mays]
gi|414886044|tpg|DAA62058.1| TPA: splicing factor U2af subunit isoform 2 [Zea mays]
gi|414886045|tpg|DAA62059.1| TPA: splicing factor U2af subunit isoform 3 [Zea mays]
gi|414886046|tpg|DAA62060.1| TPA: splicing factor U2af subunit isoform 4 [Zea mays]
gi|414886047|tpg|DAA62061.1| TPA: splicing factor U2af subunit isoform 5 [Zea mays]
gi|414886048|tpg|DAA62062.1| TPA: splicing factor U2af subunit isoform 6 [Zea mays]
gi|414886049|tpg|DAA62063.1| TPA: splicing factor U2af subunit isoform 7 [Zea mays]
gi|414886050|tpg|DAA62064.1| TPA: splicing factor U2af subunit isoform 8 [Zea mays]
Length = 287
Score = 341 bits (874), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 161/206 (78%), Positives = 181/206 (87%), Gaps = 2/206 (0%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH KPSISPTLLL NMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNKPSISPTLLLCNMYQRPDMITP 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
GVD QG +DP +IQ+ FEDFYED+F ELSK+GEIESL++CDNLADHM+GNVYV+FREEE
Sbjct: 61 GVDAQGNPIDPERIQEDFEDFYEDIFVELSKHGEIESLHVCDNLADHMIGNVYVEFREEE 120
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
AA AL+ L GR+Y+GRPII +FSPVTDFREATCRQ+EE+ CNRGGYCNFMH+K++ R+L
Sbjct: 121 QAARALQALQGRYYSGRPIIAEFSPVTDFREATCRQFEEHSCNRGGYCNFMHVKQVGRDL 180
Query: 181 RRRLFGRSRRR-RSRSRSRSRSPHKY 205
RR+LFG R RS SR SRSP Y
Sbjct: 181 RRKLFGHLHRSLRSHSRG-SRSPSPY 205
>gi|224034457|gb|ACN36304.1| unknown [Zea mays]
Length = 276
Score = 340 bits (872), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 161/206 (78%), Positives = 181/206 (87%), Gaps = 2/206 (0%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH KPSISPTLLL NMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNKPSISPTLLLCNMYQRPDMITP 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
GVD QG +DP +IQ+ FEDFYED+F ELSK+GEIESL++CDNLADHM+GNVYV+FREEE
Sbjct: 61 GVDAQGNPIDPERIQEDFEDFYEDIFVELSKHGEIESLHVCDNLADHMIGNVYVEFREEE 120
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
AA AL+ L GR+Y+GRPII +FSPVTDFREATCRQ+EE+ CNRGGYCNFMH+K++ R+L
Sbjct: 121 QAARALQALQGRYYSGRPIIAEFSPVTDFREATCRQFEEHSCNRGGYCNFMHVKQVGRDL 180
Query: 181 RRRLFGRSRRR-RSRSRSRSRSPHKY 205
RR+LFG R RS SR SRSP Y
Sbjct: 181 RRKLFGHLHRSLRSHSRG-SRSPSPY 205
>gi|449455651|ref|XP_004145565.1| PREDICTED: splicing factor U2af small subunit B-like [Cucumis
sativus]
gi|449485076|ref|XP_004157064.1| PREDICTED: splicing factor U2af small subunit B-like [Cucumis
sativus]
Length = 276
Score = 340 bits (871), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 159/187 (85%), Positives = 175/187 (93%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P+ISPTLLLSNMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
GVD QGQ +DPRKIQ+HFEDFYED++EEL K+GEIESLN+CDNLADHM+GNVYVQFREE+
Sbjct: 61 GVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNVCDNLADHMIGNVYVQFREED 120
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
AA AL+ L GRFY+GRPII DFSPVTDFREATCRQYEEN CNRGGYCNFMH+K I ++L
Sbjct: 121 QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDL 180
Query: 181 RRRLFGR 187
RR+LFGR
Sbjct: 181 RRKLFGR 187
>gi|218197274|gb|EEC79701.1| hypothetical protein OsI_20991 [Oryza sativa Indica Group]
Length = 308
Score = 340 bits (871), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 148/185 (80%), Positives = 172/185 (92%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P++SPT++L+NMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTVSPTIVLANMYQRPDMITP 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
GVD QGQ +DP K+Q+HFEDFYED++EELSK+GE+E+LN+CDNLADHM+GNVYVQFREEE
Sbjct: 61 GVDAQGQPIDPEKMQEHFEDFYEDIYEELSKFGEVETLNVCDNLADHMIGNVYVQFREEE 120
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A L GRFY+GRPIIV++SPVTDFREATCRQ+EEN CNRGGYCNFMH+K+I REL
Sbjct: 121 QAVAAHNALQGRFYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGREL 180
Query: 181 RRRLF 185
RR+L+
Sbjct: 181 RRKLY 185
>gi|115465463|ref|NP_001056331.1| Os05g0564200 [Oryza sativa Japonica Group]
gi|75323083|sp|Q6AUG0.1|U2AFB_ORYSJ RecName: Full=Splicing factor U2af small subunit B; AltName:
Full=U2 auxiliary factor 35 kDa subunit B; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
small subunit B; Short=U2 snRNP auxiliary factor small
subunit B; AltName: Full=Zinc finger CCCH
domain-containing protein 38; Short=OsC3H38
gi|50511477|gb|AAT77399.1| U2 snRNP auxiliary factor, small subunit [Oryza sativa Japonica
Group]
gi|113579882|dbj|BAF18245.1| Os05g0564200 [Oryza sativa Japonica Group]
gi|215687259|dbj|BAG91824.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215740784|dbj|BAG96940.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632568|gb|EEE64700.1| hypothetical protein OsJ_19555 [Oryza sativa Japonica Group]
Length = 304
Score = 339 bits (869), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 148/185 (80%), Positives = 172/185 (92%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P++SPT++L+NMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTVSPTIVLANMYQRPDMITP 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
GVD QGQ +DP K+Q+HFEDFYED++EELSK+GE+E+LN+CDNLADHM+GNVYVQFREEE
Sbjct: 61 GVDAQGQPIDPEKMQEHFEDFYEDIYEELSKFGEVETLNVCDNLADHMIGNVYVQFREEE 120
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A L GRFY+GRPIIV++SPVTDFREATCRQ+EEN CNRGGYCNFMH+K+I REL
Sbjct: 121 QAVAAHNALQGRFYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGREL 180
Query: 181 RRRLF 185
RR+L+
Sbjct: 181 RRKLY 185
>gi|3850816|emb|CAA77132.1| U2 snRNP auxiliary factor, small subunit [Oryza sativa]
Length = 301
Score = 338 bits (868), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 148/185 (80%), Positives = 172/185 (92%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P++SPT++L+NMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTVSPTIVLANMYQRPDMITP 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
GVD QGQ +DP K+Q+HFEDFYED++EELSK+GE+E+LN+CDNLADHM+GNVYVQFREEE
Sbjct: 61 GVDAQGQPIDPEKMQEHFEDFYEDIYEELSKFGEVETLNVCDNLADHMIGNVYVQFREEE 120
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A L GRFY+GRPIIV++SPVTDFREATCRQ+EEN CNRGGYCNFMH+K+I REL
Sbjct: 121 QAVAAHNALQGRFYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGREL 180
Query: 181 RRRLF 185
RR+L+
Sbjct: 181 RRKLY 185
>gi|357132564|ref|XP_003567899.1| PREDICTED: splicing factor U2af small subunit B-like [Brachypodium
distachyon]
Length = 308
Score = 336 bits (861), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 147/185 (79%), Positives = 170/185 (91%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P+ SPT++L+NMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTTSPTIVLANMYQRPDMITP 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
GVD QG +DP K+Q+HFEDFYED++EELSK+GE+E+LN+CDNLADHM+GNVYVQFREEE
Sbjct: 61 GVDAQGHTIDPEKMQEHFEDFYEDIYEELSKFGEVETLNVCDNLADHMIGNVYVQFREEE 120
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A L GRFY+GRPIIV++SPVTDFREATCRQ+EEN CNRGGYCNFMH+K+I REL
Sbjct: 121 QAVAAHNALQGRFYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGREL 180
Query: 181 RRRLF 185
RR+L+
Sbjct: 181 RRKLY 185
>gi|326522777|dbj|BAJ88434.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 325
Score = 333 bits (855), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 147/185 (79%), Positives = 170/185 (91%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P+ SPT++L+NMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTTSPTIVLANMYQRPDMITP 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
GVD QG A+ P K+Q+HFEDFYED++EELSK+GE+E+LN+CDNLADHM+GNVYVQFREEE
Sbjct: 61 GVDAQGVAIAPEKMQEHFEDFYEDIYEELSKFGEVETLNVCDNLADHMIGNVYVQFREEE 120
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A L GRFY+GRPIIV++SPVTDFREATCRQ+EEN CNRGGYCNFMH+K+I REL
Sbjct: 121 QAVAAHNALQGRFYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGREL 180
Query: 181 RRRLF 185
RR+L+
Sbjct: 181 RRKLY 185
>gi|357154143|ref|XP_003576685.1| PREDICTED: splicing factor U2af small subunit A-like [Brachypodium
distachyon]
Length = 295
Score = 329 bits (844), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 149/186 (80%), Positives = 170/186 (91%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH KPS+SPTLLL NMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNKPSVSPTLLLCNMYQRPDMITP 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
GVD QG +DP KIQ FEDFYED+F+ELSK+G +ESL++CDNLADH++GNVYVQFREE+
Sbjct: 61 GVDAQGNPIDPVKIQGDFEDFYEDIFDELSKHGVVESLHVCDNLADHLIGNVYVQFREED 120
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
AA AL+ L GRFY+GRPII +FSPVTDFREATCRQ+EE+ CNRGGYCNFMH+K+I R+L
Sbjct: 121 QAARALQALQGRFYSGRPIIAEFSPVTDFREATCRQFEEHNCNRGGYCNFMHVKEIGRDL 180
Query: 181 RRRLFG 186
R+RL+G
Sbjct: 181 RKRLYG 186
>gi|302756127|ref|XP_002961487.1| hypothetical protein SELMODRAFT_230014 [Selaginella moellendorffii]
gi|300170146|gb|EFJ36747.1| hypothetical protein SELMODRAFT_230014 [Selaginella moellendorffii]
Length = 200
Score = 329 bits (844), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 155/176 (88%), Positives = 166/176 (94%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH KP+ISPTLLLSNMYQRPDM TP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNKPTISPTLLLSNMYQRPDMATP 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
G+D GQ +D +KIQ+HFEDFYED+FEELSKYGEIESLN+CDNLADHMVGNVYVQFREEE
Sbjct: 61 GMDLNGQTMDQKKIQEHFEDFYEDMFEELSKYGEIESLNVCDNLADHMVGNVYVQFREEE 120
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKI 176
AA AL+ L+GRFYAGRPIIVDFSPVTDFREATCRQYEEN CNRGGYCNFMHL++I
Sbjct: 121 EAAAALKALSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLRRI 176
>gi|297597337|ref|NP_001043811.2| Os01g0667800 [Oryza sativa Japonica Group]
gi|255673535|dbj|BAF05725.2| Os01g0667800 [Oryza sativa Japonica Group]
Length = 207
Score = 325 bits (833), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 144/176 (81%), Positives = 163/176 (92%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAEHLASIFGTEKD+VNCPFYFKIGACRHGDRCS LH +P+ISPT++ +NMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDKVNCPFYFKIGACRHGDRCSCLHNRPTISPTVVFANMYQRPDMITP 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
GVD QGQ +DPR++Q+HFEDFYED+FEELSK+GEIE+LN+CDNLADHM+GNVYVQFREE+
Sbjct: 61 GVDAQGQPIDPRQMQEHFEDFYEDIFEELSKFGEIENLNVCDNLADHMIGNVYVQFREED 120
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKI 176
AA A L GRFY+GRPIIVDFSPVTDFREATCRQYEEN CNRGGYCNF H+K+I
Sbjct: 121 QAAAAHTALQGRFYSGRPIIVDFSPVTDFREATCRQYEENSCNRGGYCNFTHVKQI 176
>gi|302776046|ref|XP_002971319.1| hypothetical protein SELMODRAFT_67301 [Selaginella moellendorffii]
gi|300161301|gb|EFJ27917.1| hypothetical protein SELMODRAFT_67301 [Selaginella moellendorffii]
Length = 275
Score = 323 bits (828), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 153/172 (88%), Positives = 162/172 (94%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH KP+ISPTLLLSNMYQRPDM TP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNKPTISPTLLLSNMYQRPDMATP 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
G+D GQ +D +KIQ+HFEDFYED+FEELSKYGEIESLN+CDNLADHMVGNVYVQFREEE
Sbjct: 61 GMDLNGQTMDQKKIQEHFEDFYEDMFEELSKYGEIESLNVCDNLADHMVGNVYVQFREEE 120
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMH 172
AA AL+ L+GRFYAGRPIIVDFSPVTDFREATCRQYEEN CNRGGYCNFMH
Sbjct: 121 EAAAALKALSGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMH 172
>gi|125527192|gb|EAY75306.1| hypothetical protein OsI_03197 [Oryza sativa Indica Group]
Length = 263
Score = 315 bits (807), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 175/286 (61%), Positives = 201/286 (70%), Gaps = 31/286 (10%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P+ISPT++ +NMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTVVFANMYQRPDMITP 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
GVD QGQ +DPR++Q+HFEDFYED+FEELSK+GEIE+LN+CDNLADHM+GNVYVQFREE+
Sbjct: 61 GVDAQGQPIDPRQMQEHFEDFYEDIFEELSKFGEIENLNVCDNLADHMIGNVYVQFREED 120
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
AA A L GRFY+GRPIIVDFSPVTDFREATCRQ + R+L
Sbjct: 121 QAAAAHTALQGRFYSGRPIIVDFSPVTDFREATCRQL-----------------GLGRDL 163
Query: 181 RRRLFGRSRR-----RRSRSRSRSRSPHKYRGGYEERSHGGGRGSGRRDDDRDHRLHGRG 235
R++LFG R+ RS S S ++ G GRR H H G
Sbjct: 164 RKKLFGHYRKPQRGRSRSPSPSPRHRRERHDRDDYRGRDDYSGGGGRRGGSSRHERHDDG 223
Query: 236 RRPRSRSPGRRGGRSRSPGARRRSPVRESSVERRAKIEQWNREKEQ 281
R R GG SP R RSPVRESS ERRAKIEQWNRE+++
Sbjct: 224 GR------RRHGG---SPPRRARSPVRESSEERRAKIEQWNRERDE 260
>gi|125527197|gb|EAY75311.1| hypothetical protein OsI_03202 [Oryza sativa Indica Group]
Length = 265
Score = 315 bits (806), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 178/283 (62%), Positives = 203/283 (71%), Gaps = 23/283 (8%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P+ISPT++ +NMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTVVFANMYQRPDMITP 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
GVD QGQ +DPR++Q+HFEDFYED+FEELSK+GEIE+LN+CDNLADHM+GNVYVQFREE+
Sbjct: 61 GVDAQGQPIDPRQMQEHFEDFYEDIFEELSKFGEIENLNVCDNLADHMIGNVYVQFREED 120
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
AA A L GRFY+GRPIIVDFSPVTDFREATCRQ + R+L
Sbjct: 121 QAAAAHTALQGRFYSGRPIIVDFSPVTDFREATCRQL-----------------GLGRDL 163
Query: 181 RRRLFGRSRRRRSRSRSRSRSPHKYRGGYEERSHGGGRGSGRRDDDRDHRLHGRGRRPRS 240
R++LFG R+ + R RSRS SP ER R G R R
Sbjct: 164 RKKLFGHYRKPQ-RGRSRSPSPSPSPRHRRERHDRDDYRGRDDYSGGGGRRGGSSRHERH 222
Query: 241 RSPGRR--GGRSRSPGARRRSPVRESSVERRAKIEQWNREKEQ 281
GRR GG SP R RSPVRESS ERRAKIEQWNRE+++
Sbjct: 223 DDGGRRRHGG---SPPRRARSPVRESSEERRAKIEQWNRERDE 262
>gi|222619017|gb|EEE55149.1| hypothetical protein OsJ_02948 [Oryza sativa Japonica Group]
Length = 263
Score = 311 bits (798), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 173/286 (60%), Positives = 200/286 (69%), Gaps = 31/286 (10%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAEHLASIFGTEKD+VNCPFYFKIGACRHGDRCS LH +P+ISPT++ +NMYQRPDMITP
Sbjct: 1 MAEHLASIFGTEKDKVNCPFYFKIGACRHGDRCSCLHNRPTISPTVVFANMYQRPDMITP 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
GVD QGQ +DPR++Q+HFEDFYED+FEELSK+GEIE+LN+CDNLADHM+GNVYVQFREE+
Sbjct: 61 GVDAQGQPIDPRQMQEHFEDFYEDIFEELSKFGEIENLNVCDNLADHMIGNVYVQFREED 120
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
AA A L GRFY+GRPIIVDFSPVTDFREATCRQ + R+L
Sbjct: 121 QAAAAHTALQGRFYSGRPIIVDFSPVTDFREATCRQL-----------------GLGRDL 163
Query: 181 RRRLFGRSRR-----RRSRSRSRSRSPHKYRGGYEERSHGGGRGSGRRDDDRDHRLHGRG 235
R++LFG R+ RS S S ++ G GRR H H G
Sbjct: 164 RKKLFGHYRKPQRGRSRSPSPSPRHRRERHDRDDYRGRDDYSGGGGRRGGSSRHERHDDG 223
Query: 236 RRPRSRSPGRRGGRSRSPGARRRSPVRESSVERRAKIEQWNREKEQ 281
R R GG SP R RSPVRESS ERRAKIEQWNRE+++
Sbjct: 224 GR------RRHGG---SPPRRARSPVRESSEERRAKIEQWNRERDE 260
>gi|307107585|gb|EFN55827.1| hypothetical protein CHLNCDRAFT_57737 [Chlorella variabilis]
Length = 395
Score = 310 bits (794), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 138/190 (72%), Positives = 166/190 (87%), Gaps = 1/190 (0%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA HLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P+ISPT+LL NMYQ P + P
Sbjct: 1 MANHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTILLQNMYQNPILNAP 60
Query: 61 -GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREE 119
G D +DP+K+Q+ FEDFYED+F EL+K+GE+E LN+CDNLADHMVGNVYV+FR+E
Sbjct: 61 LGPDGLPMPVDPKKVQEFFEDFYEDIFLELAKFGEVEYLNVCDNLADHMVGNVYVKFRDE 120
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
E AA AL+ + GR+YAG+PI+V+FSPVTDFREATCRQYEEN C+RGGYCNFMH++ +SRE
Sbjct: 121 EEAARALQGMQGRYYAGKPIVVEFSPVTDFREATCRQYEENNCSRGGYCNFMHVRPVSRE 180
Query: 180 LRRRLFGRSR 189
LR++LFGR +
Sbjct: 181 LRKQLFGRYK 190
>gi|159476640|ref|XP_001696419.1| U2 snRNP auxiliary factor, small subunit [Chlamydomonas
reinhardtii]
gi|158282644|gb|EDP08396.1| U2 snRNP auxiliary factor, small subunit [Chlamydomonas
reinhardtii]
Length = 273
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 142/191 (74%), Positives = 165/191 (86%), Gaps = 3/191 (1%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P+ISPT+L++NMYQ P + P
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTILMANMYQNPLLNAP 60
Query: 61 GVDPQGQAL--DPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFRE 118
+ P G + DPR Q+HFEDFYED+FEEL+ +GE+E+LN+CDN ADHMVGNVY +FR+
Sbjct: 61 -LGPDGLPIRVDPRAAQEHFEDFYEDVFEELAAHGELENLNVCDNFADHMVGNVYAKFRD 119
Query: 119 EEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISR 178
E+ AA AL L GR+Y GRPIIV+FSPVTDFREATCRQYEEN CNRGGYCNFMHLK ISR
Sbjct: 120 EDAAARALTALQGRYYDGRPIIVEFSPVTDFREATCRQYEENTCNRGGYCNFMHLKPISR 179
Query: 179 ELRRRLFGRSR 189
ELR++LFGR +
Sbjct: 180 ELRKKLFGRYK 190
>gi|384254294|gb|EIE27768.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 248
Score = 308 bits (789), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 140/192 (72%), Positives = 164/192 (85%), Gaps = 1/192 (0%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDM-IT 59
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P+ISPTLLL N+YQ P +
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLPNLYQNPALNAP 60
Query: 60 PGVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREE 119
PG D +D RK Q+HFEDFYED+FEE+ KYG+IE LN+CDNLADHMVGNVY++F +E
Sbjct: 61 PGPDGLPMPVDARKSQEHFEDFYEDIFEEMDKYGQIEHLNVCDNLADHMVGNVYIKFVDE 120
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
+ AA AL+ L GRFYAGRPI+++FSPVTDFREATCRQYEEN C RGGYCNFMHL+ IS+
Sbjct: 121 DAAARALQGLTGRFYAGRPIMIEFSPVTDFREATCRQYEENTCTRGGYCNFMHLRPISKG 180
Query: 180 LRRRLFGRSRRR 191
LR+ LFGR +++
Sbjct: 181 LRKDLFGRYKKK 192
>gi|303287873|ref|XP_003063225.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455057|gb|EEH52361.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 324
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 144/195 (73%), Positives = 163/195 (83%), Gaps = 8/195 (4%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMI-- 58
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH KP++S T+L+SNMYQ P+
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNKPTLSQTILMSNMYQSPEAAMA 60
Query: 59 ----TPGVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYV 114
T G P+ A D RK+Q+HFEDFYED+FEEL+ YGEIE LNICDNLADH+VGNVYV
Sbjct: 61 AQAATSGAVPE--APDARKMQEHFEDFYEDIFEELATYGEIEGLNICDNLADHLVGNVYV 118
Query: 115 QFREEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLK 174
++REEE A AL L+GRFYAGRPI+ +FSPVTDFRE+TCRQYEEN C RGGYCNFMHLK
Sbjct: 119 KYREEESALAALNALSGRFYAGRPILCEFSPVTDFRESTCRQYEENTCTRGGYCNFMHLK 178
Query: 175 KISRELRRRLFGRSR 189
ISR LR+ LFGR +
Sbjct: 179 PISRNLRKILFGRYK 193
>gi|414878158|tpg|DAA55289.1| TPA: hypothetical protein ZEAMMB73_300759 [Zea mays]
Length = 172
Score = 302 bits (774), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 135/166 (81%), Positives = 153/166 (92%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKDRVNCPFYFKIG CRHGDRCSRLH +P+ISPTL+L+NMYQRPDMITP
Sbjct: 1 MAEYLASIFGTEKDRVNCPFYFKIGVCRHGDRCSRLHNRPTISPTLVLANMYQRPDMITP 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
GVD QGQ +DP K+Q+HFEDFYED++EEL K+GEIE+LN+CDNLADHM+GNVYVQFREEE
Sbjct: 61 GVDAQGQPIDPEKMQEHFEDFYEDIYEELGKFGEIENLNVCDNLADHMIGNVYVQFREEE 120
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGG 166
AA A L GRFY+GRPIIV++SPVTDFREATCRQ+EEN CNRGG
Sbjct: 121 QAAVAYNALQGRFYSGRPIIVEYSPVTDFREATCRQFEENSCNRGG 166
>gi|255089300|ref|XP_002506572.1| predicted protein [Micromonas sp. RCC299]
gi|226521844|gb|ACO67830.1| predicted protein [Micromonas sp. RCC299]
Length = 224
Score = 301 bits (771), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 138/189 (73%), Positives = 159/189 (84%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAEHLASIFGTEKDRVNCPFYFKIGACRHG+RCSRLH KP++S T+L+SNMYQ P
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGERCSRLHNKPTLSQTILMSNMYQSPAAAAI 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
DPR IQ+HFEDFYED+FEEL+KYGEIE LN+CDN +DH++GNVYV+FREEE
Sbjct: 61 ANPSAQINTDPRAIQEHFEDFYEDIFEELAKYGEIEGLNVCDNTSDHLIGNVYVKFREEE 120
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A AL L+GRFY+GRPI+ +FSPVTDFRE+TCRQYEEN CNRGGYCNFMHLK ISR+L
Sbjct: 121 SALAALNALSGRFYSGRPILCEFSPVTDFRESTCRQYEENTCNRGGYCNFMHLKPISRQL 180
Query: 181 RRRLFGRSR 189
R+ LFGR +
Sbjct: 181 RKILFGRYK 189
>gi|302846943|ref|XP_002955007.1| hypothetical protein VOLCADRAFT_83022 [Volvox carteri f.
nagariensis]
gi|300259770|gb|EFJ43995.1| hypothetical protein VOLCADRAFT_83022 [Volvox carteri f.
nagariensis]
Length = 288
Score = 294 bits (753), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 140/188 (74%), Positives = 164/188 (87%), Gaps = 1/188 (0%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P+ISPT+L++NMYQ P + P
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTILMANMYQNPLLNAP 60
Query: 61 -GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREE 119
G D +DP+ Q+HFEDFYED+FEEL+++GE+E+LN+CDN ADHMVGNVY +FR+E
Sbjct: 61 LGPDGLPIRVDPKAAQEHFEDFYEDVFEELAQHGELENLNVCDNFADHMVGNVYAKFRDE 120
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
+ AA AL+ L GR+Y GRPI+V+FSPVTDFREATCRQYEEN CNRGGYCNFMHLK I RE
Sbjct: 121 DAAARALQALQGRYYDGRPIVVEFSPVTDFREATCRQYEENTCNRGGYCNFMHLKPIGRE 180
Query: 180 LRRRLFGR 187
LRR+LFGR
Sbjct: 181 LRRKLFGR 188
>gi|325180898|emb|CCA15308.1| splicing factor U2AF 35 kDa subunit putative [Albugo laibachii
Nc14]
Length = 331
Score = 278 bits (711), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 137/221 (61%), Positives = 168/221 (76%), Gaps = 10/221 (4%)
Query: 2 AEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRP--DMIT 59
AEHLA I GTE+DRVNCPFYFKIGACRHGDRCSRLH KP S T+L+S+MYQ P +I
Sbjct: 51 AEHLARIHGTEEDRVNCPFYFKIGACRHGDRCSRLHNKPVFSQTILVSHMYQNPLSQIIA 110
Query: 60 PGVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREE 119
DP G LD +K+ + FEDFYE++FEEL K+G++E LNICDNL DH+VGNVYV++ +E
Sbjct: 111 QNGDPSG--LDQKKVDEDFEDFYEEVFEELCKFGKVEELNICDNLGDHLVGNVYVKYEDE 168
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
EHAA A ++L GRFYAGRP++ +FSPVTDFREA CRQ++E CNRGGYCNFMH+K +SR
Sbjct: 169 EHAAAAQKSLYGRFYAGRPLVCEFSPVTDFREARCRQFDEGTCNRGGYCNFMHVKTVSRS 228
Query: 180 LRR---RLFGR---SRRRRSRSRSRSRSPHKYRGGYEERSH 214
++R RL+ R RR +SRS S+SR K R R H
Sbjct: 229 MQRELERLYNRYKPPRRGKSRSVSKSRGHSKSRSRSPPRKH 269
>gi|412985218|emb|CCO20243.1| predicted protein [Bathycoccus prasinos]
Length = 307
Score = 273 bits (697), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 128/195 (65%), Positives = 158/195 (81%), Gaps = 3/195 (1%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMI-T 59
MAEHLASIFGTEKDRVNCPFYFKIGACRHG+RCSRLH KP++S TLLL NMYQ P+
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGERCSRLHNKPTVSQTLLLINMYQSPEQARL 60
Query: 60 PGVDPQG-QALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFRE 118
G + QG + +P+ +Q+H+EDF D+FEEL+ +GEIE LN+CDNLADHMVGNVYV+F +
Sbjct: 61 LGGNAQGARTSEPQDVQEHYEDFCHDIFEELAIHGEIEELNVCDNLADHMVGNVYVKFAD 120
Query: 119 EEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKI-S 177
E+ A A ++L+GR+Y GRPI +FSPVTDFRE+TCRQYEEN C RGGYCNFMH++ I +
Sbjct: 121 EDDAMKAKQSLDGRYYMGRPIKCEFSPVTDFRESTCRQYEENTCTRGGYCNFMHVRPIKN 180
Query: 178 RELRRRLFGRSRRRR 192
+ L LFGR ++R
Sbjct: 181 QTLAHALFGRYGKKR 195
>gi|301115075|ref|XP_002999307.1| splicing factor U2AF 35 kDa subunit [Phytophthora infestans T30-4]
gi|262111401|gb|EEY69453.1| splicing factor U2AF 35 kDa subunit [Phytophthora infestans T30-4]
Length = 340
Score = 272 bits (695), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 124/194 (63%), Positives = 155/194 (79%), Gaps = 7/194 (3%)
Query: 2 AEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRP--DMIT 59
AEHLA I GTE+DRVNCPFYFKIGACRHGDRCSRLH KP S T+L+S+MYQ P +I
Sbjct: 57 AEHLARIHGTEEDRVNCPFYFKIGACRHGDRCSRLHNKPVFSQTILVSHMYQNPIAQVIA 116
Query: 60 PGVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREE 119
DP +LD R++ + FEDFYE++FEEL K+G++E LNICDNL DH+VGNVY ++ +E
Sbjct: 117 QNGDPA--SLDQRQVDEDFEDFYEEVFEELCKFGKVEELNICDNLGDHLVGNVYAKYEDE 174
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
EHAA A ++L GRFYAGRP++ +FSPVTDFREA CRQ++E CNRGGYCNFMH+K +SR
Sbjct: 175 EHAAAAQKSLYGRFYAGRPLVCEFSPVTDFREARCRQFDEGTCNRGGYCNFMHIKTVSRS 234
Query: 180 LRR---RLFGRSRR 190
++R R+F R +R
Sbjct: 235 MQRELERMFNRGKR 248
>gi|124803997|ref|XP_001347871.1| U2 snRNP auxiliary factor, small subunit, putative [Plasmodium
falciparum 3D7]
gi|23496123|gb|AAN35784.1|AE014838_62 U2 snRNP auxiliary factor, small subunit, putative [Plasmodium
falciparum 3D7]
Length = 294
Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 135/302 (44%), Positives = 189/302 (62%), Gaps = 11/302 (3%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDM--- 57
MAEHLA I GTE+DRVNCPF++KIGACRHGD+CSR H KP+ + TL++ +MY P +
Sbjct: 1 MAEHLARIIGTEEDRVNCPFFWKIGACRHGDQCSRSHYKPNCAQTLVIRHMYDNPPIAVA 60
Query: 58 ITPGVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFR 117
I G + + LD K DHFE+FYE++F+EL KYGEIE + +CDN+ DH++GNVY+++
Sbjct: 61 IAEGQMVEDEVLD--KAADHFEEFYEEVFDELMKYGEIEDMVVCDNIGDHIIGNVYIKYT 118
Query: 118 EEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIS 177
E++A A+ LNGRFYAG+P+ ++++PVTDFREA CRQ+ E C RGGYCNFMH+K +
Sbjct: 119 HEDYAEKAVNELNGRFYAGKPLQIEYTPVTDFREARCRQFVEGQCRRGGYCNFMHIKHVP 178
Query: 178 RELRRRLFGRSRRRRSRSRSRSRSPHKYRGGYEERSHGGGRGSGRRDDDRDHRLHGRGRR 237
R ++R+LF R ++ + R S+ G+ +RD H + +
Sbjct: 179 RTVKRKLFRRMYKKYPEYKKRRARKDDSDDDGRRESYREGKDKYKRDRRSSHHYSSKRKN 238
Query: 238 PRSRSPGRRGGRSRSPGARRRSPVRESSVERRAKIEQWNREKEQADSGNKVDNSSYNDDR 297
AR RE+S ERR KIE+WN+E+E + NK DN S D++
Sbjct: 239 RSDNEDDDDDEERSYKHAR-----RENSAERREKIERWNKEREMKNM-NKEDNKSNADEK 292
Query: 298 ND 299
D
Sbjct: 293 ED 294
>gi|82541542|ref|XP_725006.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23479849|gb|EAA16571.1| similar to RIKEN cDNA 2010107D16 gene [Plasmodium yoelii yoelii]
Length = 309
Score = 264 bits (674), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 143/322 (44%), Positives = 205/322 (63%), Gaps = 22/322 (6%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAEHLA I GTE+DRVNCPF++KIGACRHGD+CSR H KP+ + TL++ +MY P M
Sbjct: 1 MAEHLARIIGTEEDRVNCPFFWKIGACRHGDQCSRSHYKPNSAQTLVIRHMYDNPPMAVA 60
Query: 61 GVDPQGQALDPRKIQ---DHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFR 117
+GQ +D + DHFE+FYE++F+EL KYGEIE + +CDN+ DH++GNVY+++
Sbjct: 61 IA--EGQMVDDEVLDQAADHFEEFYEEVFDELMKYGEIEDMVVCDNIGDHIIGNVYIKYT 118
Query: 118 EEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIS 177
E++A A++ LNGRFYAG+P+ ++++PVTDFREA CRQ+ + C RGGYCNFMH+K +
Sbjct: 119 HEDYAEKAVKELNGRFYAGKPLQIEYTPVTDFREARCRQFVDGQCRRGGYCNFMHIKHVP 178
Query: 178 RELRRRLFGR------SRRRRSRSRSRSRSPHKYRGGYEERSHGGGRGSGRRDDDRDHRL 231
R ++RRL R ++ +SR S H+Y Y +R+ R +RD ++
Sbjct: 179 RTVKRRLHKRMYKKFPMYKKNKKSRDDSDGDHRY-DRYRDRN---NRDKNKRDKYGNNYN 234
Query: 232 HGRGRRPRSRSPGRRGGRSRSPGARRRSPVRESSVERRAKIEQWNREKEQADSGNKVDNS 291
R R S G+ RS + P RE+S+ERR KIE+WN+E+E +S N+
Sbjct: 235 SSRRRHRSQSSNGQDDDNQRS----HKYPKRENSLERREKIERWNKEREMKNSQK---NN 287
Query: 292 SYNDDRNDDDRDGNGFTPNGGE 313
+ N+D + G+G N E
Sbjct: 288 NENEDTTKVENHGDGDDDNTKE 309
>gi|302808806|ref|XP_002986097.1| hypothetical protein SELMODRAFT_123490 [Selaginella moellendorffii]
gi|300146245|gb|EFJ12916.1| hypothetical protein SELMODRAFT_123490 [Selaginella moellendorffii]
Length = 262
Score = 263 bits (671), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 148/282 (52%), Positives = 182/282 (64%), Gaps = 29/282 (10%)
Query: 2 AEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPG 61
A+HLA IFGTE+DRVNCPFY K+GACRHGDRCSR H KP S TLLL NMYQ P+ ITPG
Sbjct: 5 AQHLADIFGTEQDRVNCPFYLKMGACRHGDRCSRAHVKPKQSCTLLL-NMYQSPE-ITPG 62
Query: 62 VDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEH 121
+ A+ ++Q + FYED+F+E+SK+G++E+L IC+N +H+ GNVYVQFR EEH
Sbjct: 63 QAYRNTAISKEELQKDLDAFYEDVFKEVSKHGKVEALKICNNFGNHLAGNVYVQFRHEEH 122
Query: 122 AANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELR 181
A A+ LNGRFY+GRPI +FSPVTDFREA+CRQ E+ C+RGG CNF+HL + SR L
Sbjct: 123 AVAAMAALNGRFYSGRPIAAEFSPVTDFREASCRQEEQGGCSRGGCCNFLHLYRPSRALM 182
Query: 182 RRLFGRSRRRRSRSRSRSRSPHKYRGGYEERSHGGGRGSGRRDDDRDHRLHGRGRRPRSR 241
R L G RS S +R E D +RDH+ RRPR
Sbjct: 183 RELMG--------DRSSSPPRRDHRRRPRE-----------EDGERDHK-----RRPREE 218
Query: 242 SPGRRGGRSRSPGARRRSPV--RESSVERRAKIEQWNREKEQ 281
G R R RRSP RES ER AKIE+WN+E+E+
Sbjct: 219 D-GERDYRRDGERHTRRSPPWRRESDRERLAKIERWNKEREK 259
>gi|145354635|ref|XP_001421585.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581823|gb|ABO99878.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 243
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 124/186 (66%), Positives = 145/186 (77%), Gaps = 6/186 (3%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH KP+ S T+LL+N+Y RPD +
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNKPTASQTILLTNLY-RPD-VEV 58
Query: 61 GVDPQ----GQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQF 116
DP+ G A + Q+ FE F ED+FEEL + GEIE +N+CDN+ DHM+GNVYV+F
Sbjct: 59 AADPRAATSGAASRAGRGQEGFEAFVEDVFEELDECGEIEGVNVCDNVTDHMMGNVYVKF 118
Query: 117 REEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKI 176
EEE A A+ L GR+Y GRPI +FSPVTDFRE+TCRQYEEN C RGGYCNFMHLK I
Sbjct: 119 VEEEAAGRAVEKLRGRYYDGRPIAAEFSPVTDFRESTCRQYEENSCTRGGYCNFMHLKPI 178
Query: 177 SRELRR 182
R +R+
Sbjct: 179 GRGMRK 184
>gi|443704810|gb|ELU01671.1| hypothetical protein CAPTEDRAFT_164217 [Capitella teleta]
Length = 234
Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 118/190 (62%), Positives = 143/190 (75%), Gaps = 1/190 (0%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHG+RCSRLH KP+ S T+LL N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGERCSRLHNKPTFSQTMLLQNLYINPQNTAQ 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREE 119
D + ++Q H++DF+E++F EL KYGEIE +N+CDNL DH+VGNVY++FR E
Sbjct: 61 TADGSHIIMSDEQVQQHYDDFFEEVFVELEDKYGEIEEMNVCDNLGDHLVGNVYIKFRSE 120
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
E A + LN R++ GRPI + SPVTDFREA CRQYE C RGG+CNFMHLK ISRE
Sbjct: 121 ESAEKGVEELNNRWFNGRPIHSELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE 180
Query: 180 LRRRLFGRSR 189
LRR L+GRSR
Sbjct: 181 LRRELYGRSR 190
>gi|323454278|gb|EGB10148.1| hypothetical protein AURANDRAFT_14519, partial [Aureococcus
anophagefferens]
Length = 186
Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 118/185 (63%), Positives = 146/185 (78%), Gaps = 4/185 (2%)
Query: 2 AEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRP--DMIT 59
A HLA I GTE+D+VNCPFYFKIGACRHGDRCSR H KP S T+++ +MYQ P +
Sbjct: 1 ATHLARIHGTEEDKVNCPFYFKIGACRHGDRCSRQHHKPPFSQTMIVQHMYQNPASQIAA 60
Query: 60 PGVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREE 119
G DP LDP+K+Q+ F+DFYE++++EL+KYGEIE LN+C+NL DHMVGNVY +F +E
Sbjct: 61 AGGDP--SQLDPKKVQEEFDDFYEEVYDELAKYGEIEELNVCENLGDHMVGNVYAKFADE 118
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
EH +L+ L GRFYAGRP++ +FSPVTDFREA CRQY+E VC RGGYCNFMH++ SR
Sbjct: 119 EHTDASLKALFGRFYAGRPLVCEFSPVTDFREARCRQYDEAVCTRGGYCNFMHIRTPSRS 178
Query: 180 LRRRL 184
LRR L
Sbjct: 179 LRRDL 183
>gi|308812528|ref|XP_003083571.1| U2 snRNP auxiliary factor, small subunit (ISS) [Ostreococcus tauri]
gi|116055452|emb|CAL58120.1| U2 snRNP auxiliary factor, small subunit (ISS) [Ostreococcus tauri]
Length = 246
Score = 257 bits (657), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 128/212 (60%), Positives = 151/212 (71%), Gaps = 23/212 (10%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH KPS S T+LL+NMY+
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNKPSASQTVLLTNMYR------- 53
Query: 61 GVDPQGQALDPR-----------KIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMV 109
+ G +DPR Q HFE F EDLFEEL + GEIE +N+CDN DHM
Sbjct: 54 -AEGAGGTVDPRDAASGKSASASAGQGHFEAFVEDLFEELDECGEIEGVNVCDNATDHMA 112
Query: 110 GNVYVQFREEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCN 169
GNVYV+F +E+ A AL L GR+Y GRPI+V++SPVTDF+E+TCRQYEEN C RGGYCN
Sbjct: 113 GNVYVKFVDEDGARRALEKLQGRYYDGRPILVEYSPVTDFKESTCRQYEENSCTRGGYCN 172
Query: 170 FMHLKKISRELRRRLFGRSRRRRSRSRSRSRS 201
FMHL+ I R +R++L RRR + S + S
Sbjct: 173 FMHLRPIGRSMRKQL----RRRATGSSTMDAS 200
>gi|193875780|gb|ACF24526.1| mRNA splicing factor U2 associated factor [Gymnochlora stellata]
Length = 182
Score = 257 bits (657), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 112/182 (61%), Positives = 147/182 (80%), Gaps = 1/182 (0%)
Query: 13 KDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP-GVDPQGQALDP 71
KDRVNCPFYFKIGACRHGD+CSR+H +P+ S TLL NMYQ P + P G D + L+P
Sbjct: 1 KDRVNCPFYFKIGACRHGDKCSRMHNRPATSQTLLFINMYQNPALTAPLGKDGLPKPLNP 60
Query: 72 RKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNG 131
+Q HF+ FY+D++EEL+ +G+IE+LN+CDNL+DHM+GNVYV++R+E+ A AL+++NG
Sbjct: 61 YNLQSHFQKFYKDIYEELNFFGDIENLNVCDNLSDHMIGNVYVKYRQEKSAMKALKSING 120
Query: 132 RFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRRR 191
RFYAGR I+ + SPVTDFRE+TCRQY++N C+RGGYCNFMHLK I R LR+ LF R +
Sbjct: 121 RFYAGRIIVAETSPVTDFRESTCRQYDDNTCSRGGYCNFMHLKPIKRSLRKELFTRVTKS 180
Query: 192 RS 193
+S
Sbjct: 181 KS 182
>gi|432930414|ref|XP_004081462.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like [Oryzias
latipes]
Length = 230
Score = 256 bits (655), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 116/201 (57%), Positives = 153/201 (76%), Gaps = 1/201 (0%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLH KP+ S T+ + N+Y+ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTVAMLNIYRNPQNTAQ 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREE 119
++ + ++Q+H+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR+E
Sbjct: 61 SMEGVTSNVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRKE 120
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
E A A+ +LN R++ G+PI + SPVTDFREA C QYE C RGG+CNFMHLK ISR+
Sbjct: 121 EDAEKAMLDLNNRWFNGQPIHAELSPVTDFREACCHQYETGGCTRGGFCNFMHLKPISRD 180
Query: 180 LRRRLFGRSRRRRSRSRSRSR 200
LRR+L+G R+ R R RSR R
Sbjct: 181 LRRQLYGHRRKSRQRPRSRDR 201
>gi|387914810|gb|AFK11014.1| splicing factor U2AF35 [Callorhinchus milii]
gi|392876968|gb|AFM87316.1| U2 small nuclear RNA auxiliary factor 1 [Callorhinchus milii]
gi|392879254|gb|AFM88459.1| splicing factor [Callorhinchus milii]
gi|392880418|gb|AFM89041.1| splicing factor [Callorhinchus milii]
Length = 269
Score = 256 bits (655), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 122/202 (60%), Positives = 153/202 (75%), Gaps = 2/202 (0%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLH KP+ S T+ L N+Y+ P T
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNLYRNPQNCTQ 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEEL-SKYGEIESLNICDNLADHMVGNVYVQFREE 119
D A+ ++Q+H+++F+E++F E+ KYGEIE +N+CDNL DH+VGNVYV+FR E
Sbjct: 61 TADGFHCAVGDVEMQEHYDEFFEEVFTEMEEKYGEIEEMNVCDNLGDHLVGNVYVKFRHE 120
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
E A A+ +LN R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISRE
Sbjct: 121 EDAEKAVNDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE 180
Query: 180 LRRRLFGRSRRRRSRSRSRSRS 201
LRR L+GR RR+ + SR S
Sbjct: 181 LRRELYGR-RRKSQQQGSRVTS 201
>gi|68070599|ref|XP_677211.1| U2 snRNP auxiliary factor, small subunit [Plasmodium berghei strain
ANKA]
gi|56497237|emb|CAI00252.1| U2 snRNP auxiliary factor, small subunit, putative [Plasmodium
berghei]
Length = 304
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 134/304 (44%), Positives = 191/304 (62%), Gaps = 16/304 (5%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAEHLA I GTE+DRVNCPF++KIGACRHGD+CSR H KP+ + TL++ +MY P M
Sbjct: 1 MAEHLARIIGTEEDRVNCPFFWKIGACRHGDQCSRSHYKPNSAQTLVIRHMYDNPPMAVA 60
Query: 61 GVDPQGQALDPRKIQ---DHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFR 117
+GQ +D + DHFE+FYE++F+EL KYGEIE + +CDN+ DH++GNVY+++
Sbjct: 61 IA--EGQMVDDEVLDQAADHFEEFYEEVFDELMKYGEIEDMVVCDNIGDHIIGNVYIKYT 118
Query: 118 EEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIS 177
E++A A++ LNGRFYAG+P+ ++++PVTDFREA CRQ+ + C RGGYCNFMH+K +
Sbjct: 119 HEDYAEKAIKELNGRFYAGKPLQIEYTPVTDFREARCRQFVDGQCRRGGYCNFMHIKHVP 178
Query: 178 RELRRRLFGRSRRRRSRSRSRSRSPHKYRGGYEERSHGGGRGSGRRDDDRDHRLHGRGRR 237
R ++RRL R ++ + +S G E H R RD + +
Sbjct: 179 RTVKRRLHKRMYKKFPMYKKNKKSKDDSDG---EHRHDRYRDRNNRDKHKRDKYGNSYNS 235
Query: 238 PRSRSPGRRGGRSRSPGARR-RSPVRESSVERRAKIEQWNREKEQADSGNKVDNSSYNDD 296
R R + R + P RE+S+ERR KIE+WN+E+E + NS N++
Sbjct: 236 SRRRHRSQSSNDQDDDNERSYKHPKRENSLERREKIERWNKERE-------MKNSQKNNN 288
Query: 297 RNDD 300
N+D
Sbjct: 289 ENED 292
>gi|391345692|ref|XP_003747118.1| PREDICTED: splicing factor U2af 38 kDa subunit-like [Metaseiulus
occidentalis]
Length = 229
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 113/186 (60%), Positives = 144/186 (77%), Gaps = 1/186 (0%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSR+H KP+ S T+LL N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTILLQNLYHNPQNTAQ 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREE 119
D + ++Q+HF++F+ED+F EL KYGEIE +N+CDNL DH+VGNVYV+FR+E
Sbjct: 61 TADGSHTNMTEEEMQEHFDNFFEDVFVELEDKYGEIEEMNVCDNLGDHLVGNVYVKFRKE 120
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
+ A A++ LN R++AGRP++ + SPVTDFREA CRQYE C R G+CNFMHL+ ISRE
Sbjct: 121 DDAEKAVKELNNRWFAGRPVVAELSPVTDFREACCRQYEMGECTRSGFCNFMHLRPISRE 180
Query: 180 LRRRLF 185
LR+ L+
Sbjct: 181 LRKELY 186
>gi|410896554|ref|XP_003961764.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 1
[Takifugu rubripes]
Length = 232
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 117/191 (61%), Positives = 147/191 (76%), Gaps = 1/191 (0%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLH KP+ S T+ L N+Y+ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSAQ 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREE 119
D A+ ++Q+HF++F+E++F E+ KYGE+E +NICDNL DH+VGNVYV+FR E
Sbjct: 61 SADGLTCAVSDMQMQEHFDEFFEEVFSEMEEKYGEVEEMNICDNLGDHLVGNVYVKFRNE 120
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
E A A+ +LN R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISRE
Sbjct: 121 EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE 180
Query: 180 LRRRLFGRSRR 190
LRR L+GR ++
Sbjct: 181 LRRELYGRRKK 191
>gi|4204470|gb|AAD13394.1| splicing factor U2AF35 [Takifugu rubripes]
Length = 211
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 117/191 (61%), Positives = 147/191 (76%), Gaps = 1/191 (0%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLH KP+ S T+ L N+Y+ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSAQ 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREE 119
D A+ ++Q+HF++F+E++F E+ KYGE+E +NICDNL DH+VGNVYV+FR E
Sbjct: 61 SADGLTCAVSDMQMQEHFDEFFEEVFSEMEEKYGEVEEMNICDNLGDHLVGNVYVKFRNE 120
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
E A A+ +LN R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISRE
Sbjct: 121 EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE 180
Query: 180 LRRRLFGRSRR 190
LRR L+GR ++
Sbjct: 181 LRRELYGRRKK 191
>gi|47226948|emb|CAG05840.1| unnamed protein product [Tetraodon nigroviridis]
Length = 231
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 117/191 (61%), Positives = 147/191 (76%), Gaps = 1/191 (0%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLH KP+ S T+ L N+Y+ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSAQ 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREE 119
D A+ ++Q+HF++F+E++F E+ KYGE+E +NICDNL DH+VGNVYV+FR E
Sbjct: 61 SADGLTCAVSDMQMQEHFDEFFEEVFSEMEEKYGEVEEMNICDNLGDHLVGNVYVKFRNE 120
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
E A A+ +LN R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISRE
Sbjct: 121 EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE 180
Query: 180 LRRRLFGRSRR 190
LRR L+GR ++
Sbjct: 181 LRRELYGRRKK 191
>gi|410896558|ref|XP_003961766.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 3
[Takifugu rubripes]
Length = 224
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 117/191 (61%), Positives = 147/191 (76%), Gaps = 1/191 (0%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLH KP+ S T+ L N+Y+ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSAQ 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREE 119
D A+ ++Q+HF++F+E++F E+ KYGE+E +NICDNL DH+VGNVYV+FR E
Sbjct: 61 SADGLTCAVSDMQMQEHFDEFFEEVFSEMEEKYGEVEEMNICDNLGDHLVGNVYVKFRNE 120
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
E A A+ +LN R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISRE
Sbjct: 121 EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE 180
Query: 180 LRRRLFGRSRR 190
LRR L+GR ++
Sbjct: 181 LRRELYGRRKK 191
>gi|410896556|ref|XP_003961765.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 2
[Takifugu rubripes]
Length = 231
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 117/191 (61%), Positives = 147/191 (76%), Gaps = 1/191 (0%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLH KP+ S T+ L N+Y+ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSAQ 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREE 119
D A+ ++Q+HF++F+E++F E+ KYGE+E +NICDNL DH+VGNVYV+FR E
Sbjct: 61 SADGLTCAVSDMQMQEHFDEFFEEVFSEMEEKYGEVEEMNICDNLGDHLVGNVYVKFRNE 120
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
E A A+ +LN R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISRE
Sbjct: 121 EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE 180
Query: 180 LRRRLFGRSRR 190
LRR L+GR ++
Sbjct: 181 LRRELYGRRKK 191
>gi|145324040|ref|NP_001077609.1| splicing factor U2af small subunit A [Arabidopsis thaliana]
gi|332192738|gb|AEE30859.1| splicing factor U2af small subunit A [Arabidopsis thaliana]
Length = 246
Score = 254 bits (650), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 149/237 (62%), Positives = 164/237 (69%), Gaps = 13/237 (5%)
Query: 51 MYQRPDMITPGVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVG 110
MYQRPDMITPGVD QGQ LDPRKIQ+HFEDF+EDLFEEL K+GEIESLNICDNLADHM+G
Sbjct: 1 MYQRPDMITPGVDAQGQPLDPRKIQEHFEDFFEDLFEELGKFGEIESLNICDNLADHMIG 60
Query: 111 NVYVQFREEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNF 170
NVYVQF+EE+ AA AL+ L GRFY+GRPII DFSPVTDFREATCRQYEEN CNRGGYCNF
Sbjct: 61 NVYVQFKEEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNF 120
Query: 171 MHLKKISRELRRRLFGRSRRRRSRSRSRSR-----SPHKYRGGYEERSHGGGRGSGRRDD 225
MH+K +SRELRR+LFGR RR R SP R +R R RD
Sbjct: 121 MHVKLVSRELRRKLFGRYRRSYRRGSRSRSRSRSISPRNKRDN--DRRDPSHREFSHRDR 178
Query: 226 DRDHRLHGRGRRPRSRSP-----GRRGGRSRSPGARRRSPVRESSV-ERRAKIEQWN 276
DR+ HG G+R RS G RG R SP ERRA+IEQWN
Sbjct: 179 DREFYRHGSGKRSSERSERQERDGSRGRRQASPKRGGSPGGGREGSEERRARIEQWN 235
>gi|156376577|ref|XP_001630436.1| predicted protein [Nematostella vectensis]
gi|156217457|gb|EDO38373.1| predicted protein [Nematostella vectensis]
Length = 208
Score = 254 bits (649), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 117/186 (62%), Positives = 142/186 (76%), Gaps = 1/186 (0%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLH KP+ S T+LL NMYQ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTILLQNMYQNPQSAAQ 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREE 119
D A+ + Q+H++ F+ED+F EL KYGEIE +N+CDNL DH+VGNVYV+FR E
Sbjct: 61 VADGTSNAISDVEAQEHYDRFFEDVFLELEEKYGEIEEMNVCDNLGDHLVGNVYVKFRYE 120
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
E A A+ +LN R+Y G+PI + SPVTDFREA CRQYE C RGG+CNFMHL+ ISR+
Sbjct: 121 EDAEKAVNDLNNRWYNGQPIYAELSPVTDFREACCRQYEMGECTRGGFCNFMHLRPISRD 180
Query: 180 LRRRLF 185
+RR L+
Sbjct: 181 VRRELY 186
>gi|156543322|ref|XP_001606160.1| PREDICTED: splicing factor U2af 38 kDa subunit-like [Nasonia
vitripennis]
Length = 242
Score = 253 bits (647), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 120/206 (58%), Positives = 151/206 (73%), Gaps = 4/206 (1%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSR+H KP+ S T LL N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTCLLQNLYVNPQNSAK 60
Query: 61 GVDPQGQA--LDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFR 117
D + ++Q+H+++F+ED+F E KYGEIE +N+CDNL DH+VGNVY++FR
Sbjct: 61 SADGSHLVANVSDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR 120
Query: 118 EEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIS 177
EE A A+ +LN R++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK IS
Sbjct: 121 REEDAEKAVNDLNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPIS 180
Query: 178 RELRRRLFGRSR-RRRSRSRSRSRSP 202
R+LRR L+ R + + RSRSRS+SP
Sbjct: 181 RDLRRYLYSRKKGGGKGRSRSRSKSP 206
>gi|291224089|ref|XP_002732040.1| PREDICTED: U2 small nuclear RNA auxillary factor 1-like
[Saccoglossus kowalevskii]
Length = 244
Score = 253 bits (646), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 118/191 (61%), Positives = 144/191 (75%), Gaps = 1/191 (0%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLH KP+ S T++L N+YQ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIVLLNVYQNPQNSAQ 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREE 119
+ + +Q HF+DF+E++F EL KYGEIE +N+CDN+ DH+VGNVYV+FR E
Sbjct: 61 TAEGTHCGMSDVDMQKHFDDFFEEVFTELDDKYGEIEEMNVCDNIGDHLVGNVYVKFRNE 120
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
E A A+ +LN R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISRE
Sbjct: 121 EDAEKAVNDLNNRWFNGQPIRAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE 180
Query: 180 LRRRLFGRSRR 190
LRR L+GR R
Sbjct: 181 LRRELYGRRVR 191
>gi|348537122|ref|XP_003456044.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like [Oreochromis
niloticus]
Length = 227
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 114/187 (60%), Positives = 145/187 (77%), Gaps = 1/187 (0%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLH KP+ S T+L+ N+Y+ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRNPQNSAQ 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREE 119
D A+ ++Q+H+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR E
Sbjct: 61 TADASRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRHE 120
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
E A A+ +LN R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISRE
Sbjct: 121 EDAEKAVMDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE 180
Query: 180 LRRRLFG 186
LRR L+G
Sbjct: 181 LRRELYG 187
>gi|149286928|gb|ABR23363.1| U2 snRNP splicing factor small subunit [Ornithodoros parkeri]
Length = 268
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 121/206 (58%), Positives = 148/206 (71%), Gaps = 15/206 (7%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSR+H KP+ S T+LL N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYHNPQNSAQ 60
Query: 61 GVDPQGQA-LDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFRE 118
D A + ++Q+HF++F+ED+F EL KYGEIE +N+CDNL DH+VGNVYV+FR
Sbjct: 61 TADGSHLANMTEEEMQEHFDNFFEDVFVELEDKYGEIEEMNVCDNLGDHLVGNVYVKFRR 120
Query: 119 EEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENV-------------CNRG 165
EE A A+ +LN R++AG PI + SPVTDFREA CRQYE + C R
Sbjct: 121 EEDAEKAVADLNNRWFAGHPIYSELSPVTDFREACCRQYEMGLKAKTWRGKTASEECTRS 180
Query: 166 GYCNFMHLKKISRELRRRLFGRSRRR 191
G+CNFMHLK ISRELRR L+GR RR+
Sbjct: 181 GFCNFMHLKPISRELRRELYGRKRRK 206
>gi|350534948|ref|NP_001232170.1| putative U2 snRNP auxiliary factor small subunit variant 1
[Taeniopygia guttata]
gi|197127858|gb|ACH44356.1| putative U2 snRNP auxiliary factor small subunit variant 1
[Taeniopygia guttata]
Length = 237
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 115/192 (59%), Positives = 149/192 (77%), Gaps = 1/192 (0%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLH +P+ S T+L+ N+Y+ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNRPTFSRTILIQNIYRNPQNSAQ 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREE 119
D A+ ++Q+H+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR E
Sbjct: 61 TADGSHCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE 120
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
E A A+ +LN R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISRE
Sbjct: 121 EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE 180
Query: 180 LRRRLFGRSRRR 191
LRR L+GR R++
Sbjct: 181 LRRELYGRLRKK 192
>gi|161899399|ref|XP_001712926.1| mRNA splicing factor U2 associated factor [Bigelowiella natans]
gi|75756420|gb|ABA27314.1| mRNA splicing factor U2 associated factor [Bigelowiella natans]
Length = 193
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 112/193 (58%), Positives = 149/193 (77%), Gaps = 1/193 (0%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA+HLASI GTEKDRVNCPFYFKIGACRHG +CSRLH KP+ S T+L N+YQ P + P
Sbjct: 1 MADHLASIHGTEKDRVNCPFYFKIGACRHGSKCSRLHNKPTSSQTILFVNLYQNPALKAP 60
Query: 61 -GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREE 119
G D + +P K Q FE FYEDLF+E+S +G+I+++ +CDNL+DH++GNVYV+F ++
Sbjct: 61 VGKDGLPKPKNPYKSQKQFEFFYEDLFQEMSFFGDIDNIYVCDNLSDHLIGNVYVKFLKD 120
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
+ A AL++++GRFY R I+ + SPVTDFRE+TCRQYE+N CNRGGYCNFMHLK + R
Sbjct: 121 KSAMKALKSVSGRFYDKRLIVAETSPVTDFRESTCRQYEDNTCNRGGYCNFMHLKPLKRS 180
Query: 180 LRRRLFGRSRRRR 192
R ++F + ++
Sbjct: 181 FRNKIFSLKKNKQ 193
>gi|47220971|emb|CAF98200.1| unnamed protein product [Tetraodon nigroviridis]
Length = 227
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 114/187 (60%), Positives = 145/187 (77%), Gaps = 1/187 (0%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLH KP+ S T+L+ N+Y+ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRNPQNSAQ 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREE 119
D A+ ++Q+H+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR E
Sbjct: 61 TADASRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE 120
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
E A A+ +LN R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISRE
Sbjct: 121 EDAEKAVMDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE 180
Query: 180 LRRRLFG 186
LRR L+G
Sbjct: 181 LRRELYG 187
>gi|321468463|gb|EFX79448.1| hypothetical protein DAPPUDRAFT_52589 [Daphnia pulex]
Length = 237
Score = 251 bits (641), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 117/192 (60%), Positives = 142/192 (73%), Gaps = 5/192 (2%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSR+H KP+ S T+ L N Y P T
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTICLQNFYVNPQNATK 60
Query: 61 GVD----PQGQALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQ 115
D P + + Q+HF++F+ED+F E KYGEIE +N+CDNL DH+VGNVY++
Sbjct: 61 TADGTAVPGIVTMSDEEAQEHFDNFFEDVFAECEDKYGEIEEMNVCDNLGDHLVGNVYIK 120
Query: 116 FREEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKK 175
FR EE A A+ +LN R++AGRP+ + SPVTDFREA CRQYE C R G+CNFMHLK
Sbjct: 121 FRREEDAEKAVNDLNNRWFAGRPVYAELSPVTDFREACCRQYELGECTRSGFCNFMHLKP 180
Query: 176 ISRELRRRLFGR 187
ISRELRR L+GR
Sbjct: 181 ISRELRRELYGR 192
>gi|302815930|ref|XP_002989645.1| hypothetical protein SELMODRAFT_4876 [Selaginella moellendorffii]
gi|300142616|gb|EFJ09315.1| hypothetical protein SELMODRAFT_4876 [Selaginella moellendorffii]
Length = 217
Score = 251 bits (640), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 115/185 (62%), Positives = 142/185 (76%), Gaps = 1/185 (0%)
Query: 2 AEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPG 61
A+HLA IFGTE+DRVNCPFY K+GACRHGDRCSR H KP S TLLL+NMYQ P+ ITPG
Sbjct: 1 AQHLADIFGTEQDRVNCPFYLKMGACRHGDRCSRAHVKPKQSCTLLLNNMYQSPE-ITPG 59
Query: 62 VDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEH 121
+ A+ ++Q + FYED+F+E+SK+G++E+L IC+N +H+ GNVYVQFR EEH
Sbjct: 60 QAYRNTAISKEELQKDLDAFYEDVFKEVSKHGKVEALKICNNFGNHLAGNVYVQFRHEEH 119
Query: 122 AANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELR 181
A A+ LNGRFY+GRPI +FSPVTDFREA+CRQ E+ C+RGG CNF+HL SR L
Sbjct: 120 AVAAMAALNGRFYSGRPIAAEFSPVTDFREASCRQEEQGGCSRGGCCNFLHLYHPSRALM 179
Query: 182 RRLFG 186
R L G
Sbjct: 180 RELMG 184
>gi|126329169|ref|XP_001363961.1| PREDICTED: splicing factor U2AF 26 kDa subunit-like isoform 1
[Monodelphis domestica]
Length = 222
Score = 251 bits (640), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 117/204 (57%), Positives = 151/204 (74%), Gaps = 1/204 (0%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLH KP+ S T++L N+Y+ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIVLLNLYRNPQNTAQ 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREE 119
D + ++Q+H++ F+E++F EL KYGEIE +N+CDNL DH+VGNVYV+FR E
Sbjct: 61 TADGSHCHVSDVEVQEHYDSFFEEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRRE 120
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
E A A+ LN R++ G+ + + SPVTDFRE+ CRQYE C RGG+CNFMHL+ ISR+
Sbjct: 121 EDAERAVTELNNRWFNGQAVQAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISRD 180
Query: 180 LRRRLFGRSRRRRSRSRSRSRSPH 203
LRR+L+GR RRR S +R+ H
Sbjct: 181 LRRQLYGRGPRRRGPSPTRAGGGH 204
>gi|432849900|ref|XP_004066668.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like [Oryzias
latipes]
Length = 228
Score = 249 bits (637), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 113/186 (60%), Positives = 144/186 (77%), Gaps = 1/186 (0%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLH KP+ S T+L+ N+Y+ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRNPQNSAQ 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREE 119
D A+ ++Q+H+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR E
Sbjct: 61 TADASRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE 120
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
E A A+ +LN R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISRE
Sbjct: 121 EDAEKAVMDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE 180
Query: 180 LRRRLF 185
LRR L+
Sbjct: 181 LRRELY 186
>gi|25072205|ref|NP_739566.1| splicing factor U2AF 26 kDa subunit [Mus musculus]
gi|56912216|ref|NP_001008775.1| splicing factor U2AF 26 kDa subunit [Rattus norvegicus]
gi|81912059|sp|Q7TP17.1|U2AF4_RAT RecName: Full=Splicing factor U2AF 26 kDa subunit; AltName:
Full=Liver regeneration-related protein LRRG157/LRRG158;
AltName: Full=U2 auxiliary factor 26; AltName: Full=U2
small nuclear RNA auxiliary factor 1-like protein 4
gi|81913106|sp|Q8BGJ9.1|U2AF4_MOUSE RecName: Full=Splicing factor U2AF 26 kDa subunit; AltName: Full=U2
auxiliary factor 26; AltName: Full=U2 small nuclear RNA
auxiliary factor 1-like protein 4
gi|24637023|gb|AAN63524.1|AF419339_1 U2 auxiliary factor 26 [Mus musculus]
gi|24637025|gb|AAN63525.1| U2 auxiliary factor 26 [Mus musculus]
gi|33086654|gb|AAP92639.1| Cb2-807 [Rattus norvegicus]
gi|38511878|gb|AAH60972.1| U2 small nuclear RNA auxiliary factor 1-like 4 [Mus musculus]
gi|74145330|dbj|BAE36125.1| unnamed protein product [Mus musculus]
gi|148692061|gb|EDL24008.1| U2 small nuclear RNA auxiliary factor 1-like 4 [Mus musculus]
gi|149056309|gb|EDM07740.1| U2 small nuclear RNA auxiliary factor 1-like 4, isoform CRA_d
[Rattus norvegicus]
Length = 220
Score = 249 bits (636), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 116/200 (58%), Positives = 149/200 (74%), Gaps = 1/200 (0%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLH KP+ S T++L N+Y+ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIVLLNLYRNPQNTAQ 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREE 119
D + ++Q+H+++F+E++F EL KYGEIE +N+CDNL DH+VGNVYV+FR E
Sbjct: 61 TADGSHCHVSDVEVQEHYDNFFEEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRRE 120
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
E A A+ LN R++ G+ + + SPVTDFRE+ CRQYE C RGG+CNFMHL+ ISR
Sbjct: 121 EDAERAVAELNNRWFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISRN 180
Query: 180 LRRRLFGRSRRRRSRSRSRS 199
LRR+L+GR R RS RS +
Sbjct: 181 LRRQLYGRGPRHRSPPRSHT 200
>gi|330835935|ref|XP_003292017.1| hypothetical protein DICPUDRAFT_57704 [Dictyostelium purpureum]
gi|325077756|gb|EGC31448.1| hypothetical protein DICPUDRAFT_57704 [Dictyostelium purpureum]
Length = 429
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 119/201 (59%), Positives = 147/201 (73%), Gaps = 9/201 (4%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE A+IFGTEKD+ NCPFY KIGACRHGDRCSRLH KP IS T+LL N+YQ P I+
Sbjct: 1 MAERRAAIFGTEKDQQNCPFYLKIGACRHGDRCSRLHNKPVISQTILLPNLYQSP--ISK 58
Query: 61 GVDPQGQALDPR----KIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQF 116
Q + P ++Q HF++FYED+FE L+KYG+++ LN+C NL DH+VGNVYV++
Sbjct: 59 KAIEQNGGVAPNLTEVELQQHFDEFYEDIFEGLTKYGQVDLLNVCANLGDHLVGNVYVKY 118
Query: 117 REEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKI 176
E+ A +++ L GRFY GRPII +FSPVTDF EA CRQY+ CNRGGYCNFMHL
Sbjct: 119 AREDEANESIKGLKGRFYDGRPIIAEFSPVTDFTEARCRQYDIGACNRGGYCNFMHLHTP 178
Query: 177 SRELRRRLFGRSRRRRSRSRS 197
S+ L+ +LFG RRSRS S
Sbjct: 179 SKSLQIKLFG---DRRSRSPS 196
>gi|29126228|ref|NP_803432.1| splicing factor U2AF 35 kDa subunit [Danio rerio]
gi|21105405|gb|AAM34646.1|AF506202_1 U2 small nuclear RNA auxiliary factor small subunit [Danio rerio]
Length = 249
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 115/187 (61%), Positives = 144/187 (77%), Gaps = 2/187 (1%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLH KP+ S T+ L N+Y+ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNTAQ 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEEL-SKYGEIESLNICDNLADHMVGNVYVQFREE 119
D A+ ++Q+H+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR E
Sbjct: 61 SADGL-NAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE 119
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
E A A+ NLN R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISRE
Sbjct: 120 EDAEKAVINLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE 179
Query: 180 LRRRLFG 186
LRR L+G
Sbjct: 180 LRRELYG 186
>gi|197127859|gb|ACH44357.1| putative U2 snRNP auxiliary factor small subunit variant 1
[Taeniopygia guttata]
gi|197127861|gb|ACH44359.1| putative U2 snRNP auxiliary factor small subunit variant 1
[Taeniopygia guttata]
Length = 237
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 113/186 (60%), Positives = 144/186 (77%), Gaps = 1/186 (0%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLH KP+ S T+L+ N+Y+ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRNPQNSAQ 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREE 119
D A+ ++Q+H+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR E
Sbjct: 61 TADGSHCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE 120
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
E A A+ +LN R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISRE
Sbjct: 121 EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE 180
Query: 180 LRRRLF 185
LRR L+
Sbjct: 181 LRRELY 186
>gi|68800128|ref|NP_001020374.1| splicing factor U2AF 35 kDa subunit isoform b [Homo sapiens]
gi|297287452|ref|XP_002803161.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 2
[Macaca mulatta]
gi|332872227|ref|XP_003319151.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 2 [Pan
troglodytes]
gi|344294749|ref|XP_003419078.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 2
[Loxodonta africana]
gi|359323574|ref|XP_003640135.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 2 [Canis
lupus familiaris]
gi|402862238|ref|XP_003895473.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 2 [Papio
anubis]
gi|46911414|emb|CAF29556.1| U2 snRNP auxiliary factor small subunit [Homo sapiens]
gi|119629907|gb|EAX09502.1| U2(RNU2) small nuclear RNA auxiliary factor 1, isoform CRA_b [Homo
sapiens]
gi|410206762|gb|JAA00600.1| U2 small nuclear RNA auxiliary factor 1 [Pan troglodytes]
gi|410289262|gb|JAA23231.1| U2 small nuclear RNA auxiliary factor 1 [Pan troglodytes]
Length = 240
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 113/186 (60%), Positives = 144/186 (77%), Gaps = 1/186 (0%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLH KP+ S T+L+ N+Y+ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRNPQNSAQ 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEEL-SKYGEIESLNICDNLADHMVGNVYVQFREE 119
D A+ ++Q+H+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR E
Sbjct: 61 TADGSHCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE 120
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
E A A+ +LN R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISRE
Sbjct: 121 EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE 180
Query: 180 LRRRLF 185
LRR L+
Sbjct: 181 LRRELY 186
>gi|327268484|ref|XP_003219027.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 2
[Anolis carolinensis]
Length = 242
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 113/186 (60%), Positives = 144/186 (77%), Gaps = 1/186 (0%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLH KP+ S T+L+ N+Y+ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRNPQNSAQ 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEEL-SKYGEIESLNICDNLADHMVGNVYVQFREE 119
D A+ ++Q+H+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR E
Sbjct: 61 TADGSHCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE 120
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
E A A+ +LN R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISRE
Sbjct: 121 EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE 180
Query: 180 LRRRLF 185
LRR L+
Sbjct: 181 LRRELY 186
>gi|254939700|ref|NP_001157241.1| splicing factor U2AF 35 kDa subunit isoform 2 [Mus musculus]
gi|348556405|ref|XP_003464013.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 2
[Cavia porcellus]
gi|148708397|gb|EDL40344.1| mCG14259, isoform CRA_b [Mus musculus]
gi|149043574|gb|EDL97025.1| rCG60540, isoform CRA_b [Rattus norvegicus]
Length = 239
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 113/186 (60%), Positives = 144/186 (77%), Gaps = 1/186 (0%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLH KP+ S T+L+ N+Y+ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRNPQNSAQ 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREE 119
D A+ ++Q+H+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR E
Sbjct: 61 TADGSHCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE 120
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
E A A+ +LN R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISRE
Sbjct: 121 EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE 180
Query: 180 LRRRLF 185
LRR L+
Sbjct: 181 LRRELY 186
>gi|126325215|ref|XP_001364583.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like [Monodelphis
domestica]
gi|395518569|ref|XP_003763432.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 2
[Sarcophilus harrisii]
Length = 248
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 113/186 (60%), Positives = 144/186 (77%), Gaps = 1/186 (0%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLH KP+ S T+L+ N+Y+ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRNPQNSAQ 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREE 119
D A+ ++Q+H+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR E
Sbjct: 61 TADGSHCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE 120
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
E A A+ +LN R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISRE
Sbjct: 121 EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE 180
Query: 180 LRRRLF 185
LRR L+
Sbjct: 181 LRRELY 186
>gi|148223762|ref|NP_001089860.1| U2 small nuclear RNA auxiliary factor 1 [Xenopus laevis]
gi|80477616|gb|AAI08559.1| MGC131026 protein [Xenopus laevis]
Length = 245
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 114/186 (61%), Positives = 145/186 (77%), Gaps = 1/186 (0%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLH KP+ S T+ L N+Y+ P +
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQ 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEEL-SKYGEIESLNICDNLADHMVGNVYVQFREE 119
D A+ ++Q+H+++F+E++F E+ KYGEIE +N+CDNL DH+VGNVYV+FR E
Sbjct: 61 SADGLRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEIEEMNVCDNLGDHLVGNVYVKFRRE 120
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
E A A+++LN R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISRE
Sbjct: 121 EDAEKAVKDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE 180
Query: 180 LRRRLF 185
LRR L+
Sbjct: 181 LRRELY 186
>gi|281203736|gb|EFA77932.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 439
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 116/202 (57%), Positives = 146/202 (72%), Gaps = 9/202 (4%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE A++FGTEKD+ NCPFY KIGACRHGDRCSRLH KP +S T++L N+YQ P + P
Sbjct: 1 MAERRAAMFGTEKDQQNCPFYLKIGACRHGDRCSRLHNKPIVSQTIILPNIYQSPYLKRP 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
P A + +IQ HF+DFYED+ E LSKYG+IE L++C NL DH++GN+YV++ E+
Sbjct: 61 AGQPPIPASE-EEIQKHFDDFYEDIHEGLSKYGKIELLHVCANLGDHLIGNLYVKYSTED 119
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
AA A+ L GRFY GRPI+ +FSPVTDF E+ CRQ++ C+RGG+CNFMHL SREL
Sbjct: 120 AAAAAIEGLKGRFYDGRPIVAEFSPVTDFNESRCRQFDLGTCDRGGFCNFMHLHNPSREL 179
Query: 181 RRRLFGRSRRRRSRSRSRSRSP 202
RLFG R+ SRSP
Sbjct: 180 SVRLFGE--------RAASRSP 193
>gi|113931334|ref|NP_001039113.1| U2 small nuclear RNA auxiliary factor 1 [Xenopus (Silurana)
tropicalis]
gi|89268927|emb|CAJ81820.1| U2(RNU2) small nuclear RNA auxiliary factor 1 [Xenopus (Silurana)
tropicalis]
Length = 243
Score = 248 bits (633), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 113/186 (60%), Positives = 145/186 (77%), Gaps = 1/186 (0%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLH KP+ S T+ L N+Y+ P +
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQ 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREE 119
D A+ ++Q+H+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR E
Sbjct: 61 SADGLRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE 120
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
E A A+++LN R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISRE
Sbjct: 121 EDAEKAVKDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE 180
Query: 180 LRRRLF 185
LRR L+
Sbjct: 181 LRRELY 186
>gi|348530872|ref|XP_003452934.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like [Oreochromis
niloticus]
Length = 238
Score = 248 bits (632), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 113/186 (60%), Positives = 144/186 (77%), Gaps = 1/186 (0%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLH KP+ S T+ L N+Y+ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSAQ 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREE 119
VD + ++Q+H+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR+E
Sbjct: 61 SVDGLTCTISDTEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRKE 120
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
E A A+ +LN R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISRE
Sbjct: 121 EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEIGECTRGGFCNFMHLKPISRE 180
Query: 180 LRRRLF 185
LRR L+
Sbjct: 181 LRRELY 186
>gi|384494564|gb|EIE85055.1| hypothetical protein RO3G_09765 [Rhizopus delemar RA 99-880]
Length = 243
Score = 248 bits (632), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 112/185 (60%), Positives = 142/185 (76%), Gaps = 6/185 (3%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASI+GTEKD+VNC FYFKIGACRHGDRCSR H KP+ S TLL++NMY+ P
Sbjct: 1 MAEYLASIYGTEKDKVNCSFYFKIGACRHGDRCSRKHVKPTFSQTLLIANMYKNP----- 55
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
V L ++Q++F+ FYED+F EL+K+GE+E + +CDN+ DH+VGNVY Q+R EE
Sbjct: 56 -VHDAAFHLTESQLQENFDLFYEDVFMELAKFGEVEDMVVCDNVGDHLVGNVYCQYRLEE 114
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A NA+ +LN RFYAGRP+ + SPVTDFREA CRQ+E CNRGG+CNFMHLK +R +
Sbjct: 115 SAGNAVESLNNRFYAGRPLYAELSPVTDFREACCRQHEIAECNRGGFCNFMHLKHPTRTM 174
Query: 181 RRRLF 185
RR L+
Sbjct: 175 RRELY 179
>gi|260831488|ref|XP_002610691.1| hypothetical protein BRAFLDRAFT_202693 [Branchiostoma floridae]
gi|229296058|gb|EEN66701.1| hypothetical protein BRAFLDRAFT_202693 [Branchiostoma floridae]
Length = 197
Score = 247 bits (631), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 115/188 (61%), Positives = 145/188 (77%), Gaps = 2/188 (1%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLH KP+ S T+L+ N+Y+ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTILMPNLYRNPQNSAQ 60
Query: 61 GVD-PQGQALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFRE 118
D + ++Q+H+++F+E++F EL KYGEIE +N+CDNL DH+VGNVYV+FR
Sbjct: 61 TADGSHCNNISDVEMQEHYDNFFEEVFTELEEKYGEIEEMNVCDNLGDHLVGNVYVKFRY 120
Query: 119 EEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISR 178
EE A A+++LN R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISR
Sbjct: 121 EEDAEKAVKDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISR 180
Query: 179 ELRRRLFG 186
ELRR L+G
Sbjct: 181 ELRRELYG 188
>gi|384486958|gb|EIE79138.1| hypothetical protein RO3G_03843 [Rhizopus delemar RA 99-880]
Length = 230
Score = 246 bits (629), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 114/185 (61%), Positives = 142/185 (76%), Gaps = 6/185 (3%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASI+GTEKD+VNC FYFKIGACRHGDRCSR H KP+ S TLL++NMY+ P
Sbjct: 1 MAEYLASIYGTEKDKVNCSFYFKIGACRHGDRCSRKHVKPTFSQTLLIANMYK-----NP 55
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
DP L ++Q+ F+ FYED+F EL+K+GE+E + +CDN+ DH+VGNVY QFR EE
Sbjct: 56 AHDPNFH-LTENQLQEDFDLFYEDVFMELAKFGEVEEMVVCDNVGDHLVGNVYCQFRLEE 114
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A NA+ +LN RFYAGRP+ + SPVTDFREA CRQ+E CNRGG+CNFMHLK +R L
Sbjct: 115 SAGNAVESLNNRFYAGRPLYAELSPVTDFREACCRQHEIAECNRGGFCNFMHLKHPTRAL 174
Query: 181 RRRLF 185
R+ L+
Sbjct: 175 RQELY 179
>gi|223646964|gb|ACN10240.1| Splicing factor U2AF 35 kDa subunit [Salmo salar]
gi|223672827|gb|ACN12595.1| Splicing factor U2AF 35 kDa subunit [Salmo salar]
Length = 227
Score = 246 bits (629), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 113/186 (60%), Positives = 143/186 (76%), Gaps = 1/186 (0%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLH KP+ S T+ L N+Y+ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNTAQ 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREE 119
D A+ ++Q+H+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR E
Sbjct: 61 SADGLRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE 120
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
E A A+ +LN R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISRE
Sbjct: 121 EDAEKAVMDLNNRWFNGQPIHAELSPVTDFREAYCRQYEMGECTRGGFCNFMHLKPISRE 180
Query: 180 LRRRLF 185
LRR L+
Sbjct: 181 LRRELY 186
>gi|156086588|ref|XP_001610703.1| U2 splicing factor subunit [Babesia bovis T2Bo]
gi|154797956|gb|EDO07135.1| U2 splicing factor subunit, putative [Babesia bovis]
Length = 251
Score = 246 bits (629), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 132/289 (45%), Positives = 176/289 (60%), Gaps = 41/289 (14%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDM--- 57
MAE+LA I GTE+DRVNCPFY+KIGACRHGD+CSR H KPS + TL++ +MYQ P +
Sbjct: 1 MAENLARIIGTEEDRVNCPFYWKIGACRHGDQCSRAHYKPSAAQTLVIRHMYQNPPVAIA 60
Query: 58 ITPGVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFR 117
I G + LD K DHFE+FYE++F EL KYGEIE + +CDN+ DH++GNVYV++R
Sbjct: 61 IAEGQMISDELLD--KAADHFEEFYEEVFLELMKYGEIEDMVVCDNIGDHIIGNVYVKYR 118
Query: 118 EEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIS 177
+E AA+A+ L+GRFY G+PI +++PVTDFREA CRQ+ E C RGGYCNFMH+K +
Sbjct: 119 DENSAAHAISMLSGRFYGGKPIQCEYTPVTDFREARCRQFVEGQCRRGGYCNFMHIKHVP 178
Query: 178 RELRRRLFGRSRRRRSRSRSRSRSPHKYRGGYEERSHGGGRGSGRRDDDRDHRLHGRGRR 237
R +RR+L R + P Y++R+ SGR D R
Sbjct: 179 RSVRRKL---------DERMYAEFPE-----YKKRALRSSERSGRYVDSEALITFHSYER 224
Query: 238 PRSRSPGRRGGRSRSPGARRRSPVRESSVERRAKIEQWNREKEQADSGN 286
P+ R++S ERR IE WNRE++ ++ N
Sbjct: 225 PK----------------------RQTSQERRNMIEMWNRERDARENAN 251
>gi|66811624|ref|XP_639991.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|60466958|gb|EAL65002.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 471
Score = 246 bits (629), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 116/199 (58%), Positives = 147/199 (73%), Gaps = 5/199 (2%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE A+IFGTEKD+ NCPFY KIGACRHGDRCSRLH KP +S T+LL N+YQ P
Sbjct: 1 MAERRAAIFGTEKDQQNCPFYLKIGACRHGDRCSRLHNKPVLSQTILLPNLYQSPISKKA 60
Query: 61 GVDPQGQA--LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFRE 118
GQA L ++Q HF++FYED++E L+KYG+++ LN+C NL DH+VGNVYV++++
Sbjct: 61 IEAAGGQAPNLSDAELQQHFDEFYEDIYEGLAKYGQVDLLNVCANLGDHLVGNVYVKYQK 120
Query: 119 EEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISR 178
E+ A +++ L GRFY GRPII +FSPVTDF EA CRQY+ CNRGG+CNFMHL S+
Sbjct: 121 EDDANESIKGLKGRFYDGRPIISEFSPVTDFTEARCRQYDIGTCNRGGFCNFMHLHNPSK 180
Query: 179 ELRRRLFGRSRRRRSRSRS 197
L +LFG R+SRS S
Sbjct: 181 SLYYKLFG---DRKSRSPS 196
>gi|112983840|ref|NP_001037756.1| uncharacterized protein LOC687575 [Rattus norvegicus]
gi|254939694|ref|NP_077149.2| splicing factor U2AF 35 kDa subunit isoform 1 [Mus musculus]
gi|348556403|ref|XP_003464012.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 1
[Cavia porcellus]
gi|17368837|sp|Q9D883.4|U2AF1_MOUSE RecName: Full=Splicing factor U2AF 35 kDa subunit; AltName: Full=U2
auxiliary factor 35 kDa subunit; AltName: Full=U2 snRNP
auxiliary factor small subunit
gi|12849864|dbj|BAB28511.1| unnamed protein product [Mus musculus]
gi|26354106|dbj|BAC40683.1| unnamed protein product [Mus musculus]
gi|74181282|dbj|BAE29923.1| unnamed protein product [Mus musculus]
gi|76779398|gb|AAI05906.1| Similar to Splicing factor U2AF 35 kDa subunit (U2 auxiliary factor
35 kDa subunit) (U2 snRNP auxiliary factor small
subunit) [Rattus norvegicus]
gi|109730851|gb|AAI15480.1| U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1 [Mus
musculus]
gi|109732120|gb|AAI15481.1| U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1 [Mus
musculus]
gi|148708396|gb|EDL40343.1| mCG14259, isoform CRA_a [Mus musculus]
gi|149043573|gb|EDL97024.1| rCG60540, isoform CRA_a [Rattus norvegicus]
Length = 239
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 113/186 (60%), Positives = 144/186 (77%), Gaps = 1/186 (0%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLH KP+ S T+ L N+Y+ P +
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQ 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREE 119
D A+ ++Q+H+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR E
Sbjct: 61 SADGLRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE 120
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
E A A+ +LN R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISRE
Sbjct: 121 EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE 180
Query: 180 LRRRLF 185
LRR L+
Sbjct: 181 LRRELY 186
>gi|395518567|ref|XP_003763431.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 1
[Sarcophilus harrisii]
Length = 248
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 113/186 (60%), Positives = 144/186 (77%), Gaps = 1/186 (0%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLH KP+ S T+ L N+Y+ P +
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQ 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREE 119
D A+ ++Q+H+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR E
Sbjct: 61 SADGLRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE 120
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
E A A+ +LN R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISRE
Sbjct: 121 EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE 180
Query: 180 LRRRLF 185
LRR L+
Sbjct: 181 LRRELY 186
>gi|327268486|ref|XP_003219028.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 3
[Anolis carolinensis]
Length = 236
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 113/186 (60%), Positives = 144/186 (77%), Gaps = 1/186 (0%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLH KP+ S T+ L N+Y+ P +
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQ 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREE 119
D A+ ++Q+H+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR E
Sbjct: 61 SADGLRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE 120
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
E A A+ +LN R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISRE
Sbjct: 121 EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE 180
Query: 180 LRRRLF 185
LRR L+
Sbjct: 181 LRRELY 186
>gi|327268482|ref|XP_003219026.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 1
[Anolis carolinensis]
Length = 242
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 113/186 (60%), Positives = 144/186 (77%), Gaps = 1/186 (0%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLH KP+ S T+ L N+Y+ P +
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQ 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEEL-SKYGEIESLNICDNLADHMVGNVYVQFREE 119
D A+ ++Q+H+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR E
Sbjct: 61 SADGLRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE 120
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
E A A+ +LN R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISRE
Sbjct: 121 EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE 180
Query: 180 LRRRLF 185
LRR L+
Sbjct: 181 LRRELY 186
>gi|122692549|ref|NP_001073737.1| splicing factor U2AF 35 kDa subunit [Bos taurus]
gi|122703746|ref|NP_989986.2| splicing factor U2AF 35 kDa subunit [Gallus gallus]
gi|146325808|sp|A1A4K8.1|U2AF1_BOVIN RecName: Full=Splicing factor U2AF 35 kDa subunit; AltName: Full=U2
auxiliary factor 35 kDa subunit; AltName: Full=U2 snRNP
auxiliary factor small subunit
gi|13235096|emb|CAC33541.1| U2snRNP auxiliary factor small subunit [Gallus gallus]
gi|13235098|emb|CAC33542.1| U2snRNP auxiliary factor small subunit [Gallus gallus]
gi|13235100|emb|CAC33543.1| U2snRNP auxiliary factor small subunit [Gallus gallus]
gi|119223947|gb|AAI26639.1| U2 small nuclear RNA auxiliary factor 1 [Bos taurus]
gi|296490881|tpg|DAA32994.1| TPA: splicing factor U2AF 35 kDa subunit [Bos taurus]
Length = 237
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 113/186 (60%), Positives = 144/186 (77%), Gaps = 1/186 (0%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLH KP+ S T+ L N+Y+ P +
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQ 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREE 119
D A+ ++Q+H+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR E
Sbjct: 61 SADGLRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE 120
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
E A A+ +LN R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISRE
Sbjct: 121 EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE 180
Query: 180 LRRRLF 185
LRR L+
Sbjct: 181 LRRELY 186
>gi|5803207|ref|NP_006749.1| splicing factor U2AF 35 kDa subunit isoform a [Homo sapiens]
gi|297287450|ref|XP_001118538.2| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 1
[Macaca mulatta]
gi|332872225|ref|XP_001137466.2| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 1 [Pan
troglodytes]
gi|344294747|ref|XP_003419077.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 1
[Loxodonta africana]
gi|359323572|ref|XP_003640134.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 1 [Canis
lupus familiaris]
gi|402862236|ref|XP_003895472.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 1 [Papio
anubis]
gi|410060371|ref|XP_003949235.1| PREDICTED: splicing factor U2AF 35 kDa subunit [Pan troglodytes]
gi|267187|sp|Q01081.3|U2AF1_HUMAN RecName: Full=Splicing factor U2AF 35 kDa subunit; AltName: Full=U2
auxiliary factor 35 kDa subunit; AltName: Full=U2 small
nuclear RNA auxiliary factor 1; AltName: Full=U2 snRNP
auxiliary factor small subunit
gi|338263|gb|AAA36619.1| U2 snRNP auxiliary factor small subunit [Homo sapiens]
gi|7768747|dbj|BAA95534.1| U2 snRNP auxiliary factor small subunit [Homo sapiens]
gi|12654677|gb|AAH01177.1| U2 small nuclear RNA auxiliary factor 1 [Homo sapiens]
gi|12804941|gb|AAH01923.1| U2 small nuclear RNA auxiliary factor 1 [Homo sapiens]
gi|119629911|gb|EAX09506.1| U2(RNU2) small nuclear RNA auxiliary factor 1, isoform CRA_d [Homo
sapiens]
gi|261861084|dbj|BAI47064.1| U2 small nuclear RNA auxiliary factor 1 [synthetic construct]
gi|410206760|gb|JAA00599.1| U2 small nuclear RNA auxiliary factor 1 [Pan troglodytes]
gi|410289260|gb|JAA23230.1| U2 small nuclear RNA auxiliary factor 1 [Pan troglodytes]
gi|410331625|gb|JAA34759.1| U2 small nuclear RNA auxiliary factor 1 [Pan troglodytes]
Length = 240
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 113/186 (60%), Positives = 144/186 (77%), Gaps = 1/186 (0%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLH KP+ S T+ L N+Y+ P +
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQ 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEEL-SKYGEIESLNICDNLADHMVGNVYVQFREE 119
D A+ ++Q+H+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR E
Sbjct: 61 SADGLRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE 120
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
E A A+ +LN R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISRE
Sbjct: 121 EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE 180
Query: 180 LRRRLF 185
LRR L+
Sbjct: 181 LRRELY 186
>gi|71051663|gb|AAH98601.1| U2af1 protein [Danio rerio]
Length = 250
Score = 246 bits (627), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 114/187 (60%), Positives = 144/187 (77%), Gaps = 2/187 (1%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLH KP+ S T+ L N+Y+ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNTAQ 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEEL-SKYGEIESLNICDNLADHMVGNVYVQFREE 119
D A+ ++++H+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR E
Sbjct: 61 SADGL-NAVSDVEMREHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE 119
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
E A A+ NLN R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISRE
Sbjct: 120 EDAEKAVINLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE 179
Query: 180 LRRRLFG 186
LRR L+G
Sbjct: 180 LRRELYG 186
>gi|223646168|gb|ACN09842.1| Splicing factor U2AF 35 kDa subunit [Salmo salar]
gi|223672015|gb|ACN12189.1| Splicing factor U2AF 35 kDa subunit [Salmo salar]
Length = 244
Score = 246 bits (627), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 112/186 (60%), Positives = 143/186 (76%), Gaps = 1/186 (0%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLH KP+ S T+ L N+Y+ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNTAQ 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREE 119
D A+ ++Q+H+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR E
Sbjct: 61 SADGIRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE 120
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
E A A+ +LN R++ G+P+ + SPVTDFREA CRQYE C RGG+CNFMHLK ISRE
Sbjct: 121 EDAEKAVMDLNNRWFNGQPVHSELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE 180
Query: 180 LRRRLF 185
LRR L+
Sbjct: 181 LRRDLY 186
>gi|390354481|ref|XP_789191.3| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 2
[Strongylocentrotus purpuratus]
gi|390354483|ref|XP_003728344.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 1
[Strongylocentrotus purpuratus]
Length = 241
Score = 246 bits (627), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 124/211 (58%), Positives = 155/211 (73%), Gaps = 10/211 (4%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLH KP+ S T+++ N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIVIQNIYHNPANTAQ 60
Query: 61 --------GVDPQGQALDPRKIQDHFEDFYEDLFEEL-SKYGEIESLNICDNLADHMVGN 111
G+ Q L ++Q HF+DF+E++F E+ KYGEIE +N+CDNL DH+VGN
Sbjct: 61 SAEGGAAVGIADQSN-LSDVEVQQHFDDFFEEVFAEMEQKYGEIEEMNVCDNLGDHLVGN 119
Query: 112 VYVQFREEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFM 171
VYV+FR EE A A+ +LN R++ +PI + SPVTDFREA CRQYE C RGG+CNFM
Sbjct: 120 VYVKFRYEEDAEKAVEDLNNRWFNRQPIRAELSPVTDFREACCRQYEMGECTRGGFCNFM 179
Query: 172 HLKKISRELRRRLFGRSRRRRSRSRSRSRSP 202
HLK ISRELRR L+GR +R++ SRS+S SP
Sbjct: 180 HLKPISRELRRELYGRRKRKKRSSRSKSTSP 210
>gi|193613212|ref|XP_001950331.1| PREDICTED: splicing factor U2af 38 kDa subunit-like isoform 1
[Acyrthosiphon pisum]
Length = 249
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 112/188 (59%), Positives = 141/188 (75%), Gaps = 3/188 (1%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSR+H KP+ S T+LL N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNPQNSAK 60
Query: 61 GVDPQGQA--LDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFR 117
D + ++Q+H+++F+ED+F E KYGEIE +N+CDNL DH+VGNVY++FR
Sbjct: 61 SADGSHLVSNVTDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR 120
Query: 118 EEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIS 177
EEHA A+ +LN R++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK IS
Sbjct: 121 REEHAEAAVNDLNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPIS 180
Query: 178 RELRRRLF 185
RELR+ L+
Sbjct: 181 RELRKYLY 188
>gi|138519996|gb|AAI35291.1| LOC733934 protein [Xenopus (Silurana) tropicalis]
Length = 241
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 112/185 (60%), Positives = 144/185 (77%), Gaps = 1/185 (0%)
Query: 2 AEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPG 61
AE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLH KP+ S T+ L N+Y+ P +
Sbjct: 1 AEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQS 60
Query: 62 VDPQGQALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREEE 120
D A+ ++Q+H+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR EE
Sbjct: 61 ADGLRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREE 120
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A+++LN R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISREL
Sbjct: 121 DAEKAVKDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISREL 180
Query: 181 RRRLF 185
RR L+
Sbjct: 181 RRELY 185
>gi|410906167|ref|XP_003966563.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 2
[Takifugu rubripes]
Length = 235
Score = 244 bits (623), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 114/194 (58%), Positives = 146/194 (75%), Gaps = 5/194 (2%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLH KP+ S T+L+ N+Y+ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRNPQNSAQ 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEEL-SKYGEIESLNICDNLADHMVGNVYVQFREE 119
D A+ ++Q+H+++F+E++F E+ KYGE+E +N+CDNL DH+VGN FR E
Sbjct: 61 TADASRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGN----FRRE 116
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
E A A+ +LN R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISRE
Sbjct: 117 EDAEKAVMDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE 176
Query: 180 LRRRLFGRSRRRRS 193
LRR L+GR R+ +S
Sbjct: 177 LRRELYGRRRKSQS 190
>gi|197692189|dbj|BAG70058.1| U2 small nuclear RNA auxillary factor 1 isoform a [Homo sapiens]
Length = 240
Score = 244 bits (623), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 112/186 (60%), Positives = 144/186 (77%), Gaps = 1/186 (0%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLH KP+ S T+ L N+Y+ P +
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQ 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEEL-SKYGEIESLNICDNLADHMVGNVYVQFREE 119
D A+ ++Q+H+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR E
Sbjct: 61 SADGLRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE 120
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
E A A+ +LN R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHL+ ISRE
Sbjct: 121 EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLEPISRE 180
Query: 180 LRRRLF 185
LRR L+
Sbjct: 181 LRRELY 186
>gi|427787701|gb|JAA59302.1| Putative u2 small nuclear riboprotein auxiliary factor 38
[Rhipicephalus pulchellus]
Length = 253
Score = 244 bits (622), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 117/200 (58%), Positives = 143/200 (71%), Gaps = 15/200 (7%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSR+H KP+ S T+LL N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYHNPQNSAQ 60
Query: 61 GVDPQGQA-LDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFRE 118
D A + ++Q+HF++F+ED+F EL KYGEIE +N+CDNL DH+VGNVYV+FR
Sbjct: 61 TADGSHLANMTEEEMQEHFDNFFEDVFVELEDKYGEIEEMNVCDNLGDHLVGNVYVKFRR 120
Query: 119 EEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENV-------------CNRG 165
EE A A+ +LN R++AG PI + SPVTDFREA CRQYE + C R
Sbjct: 121 EEDAEKAVADLNNRWFAGHPIYSELSPVTDFREACCRQYEMGLKAKTWRSTAATEECTRS 180
Query: 166 GYCNFMHLKKISRELRRRLF 185
G+CNFMHLK ISRELRR L+
Sbjct: 181 GFCNFMHLKPISRELRRELY 200
>gi|452820320|gb|EME27364.1| splicing factor U2AF 35 kDa subunit [Galdieria sulphuraria]
Length = 285
Score = 244 bits (622), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 113/188 (60%), Positives = 144/188 (76%), Gaps = 3/188 (1%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAEHLASIFGTEKDRVNCPFYFKIGACRHG+RCSRLH KP S T+LL NMY D I
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGERCSRLHNKPVFSQTILLKNMYLSVDQIAA 60
Query: 61 GVDPQGQA---LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFR 117
G + I+ HF+DFYED+++ELSKYGEIE +++C+N+++H+ GNVY++F+
Sbjct: 61 AAIAVGAKPPEMSEEDIKYHFDDFYEDVYDELSKYGEIEEMHVCENMSEHLTGNVYIKFK 120
Query: 118 EEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIS 177
+E+ A AL+ +NGR+YAGR + +FSPVTDFREA CR YE +C+RG YCNFMH+K+IS
Sbjct: 121 DEDAAQRALQAVNGRYYAGRMVHAEFSPVTDFREARCRPYERQLCDRGDYCNFMHIKRIS 180
Query: 178 RELRRRLF 185
+L LF
Sbjct: 181 DDLFNGLF 188
>gi|196016447|ref|XP_002118076.1| hypothetical protein TRIADDRAFT_33482 [Trichoplax adhaerens]
gi|190579379|gb|EDV19476.1| hypothetical protein TRIADDRAFT_33482 [Trichoplax adhaerens]
Length = 183
Score = 244 bits (622), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 112/183 (61%), Positives = 138/183 (75%), Gaps = 2/183 (1%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHG+RCSRLH KP+ S T+++ N++Q P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGERCSRLHNKPTFSQTIVMQNIFQNPQHTVQ 60
Query: 61 GVDPQGQA-LDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFRE 118
D ++ + Q HF+ +YED+F EL KYGEIE +N+CDNL DH+VGNVYV+FR
Sbjct: 61 LADGSYKSNMSDEDAQKHFDHYYEDIFVELEEKYGEIEEMNVCDNLGDHLVGNVYVKFRS 120
Query: 119 EEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISR 178
EEHA+ A+ +LN R++ G PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISR
Sbjct: 121 EEHASAAVNSLNNRWFNGNPIFAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISR 180
Query: 179 ELR 181
LR
Sbjct: 181 SLR 183
>gi|12805423|gb|AAH02184.1| U2af1 protein, partial [Mus musculus]
Length = 238
Score = 243 bits (621), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 112/185 (60%), Positives = 143/185 (77%), Gaps = 1/185 (0%)
Query: 2 AEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPG 61
AE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLH KP+ S T+ L N+Y+ P +
Sbjct: 1 AEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQS 60
Query: 62 VDPQGQALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREEE 120
D A+ ++Q+H+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR EE
Sbjct: 61 ADGLRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREE 120
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A+ +LN R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISREL
Sbjct: 121 DAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISREL 180
Query: 181 RRRLF 185
RR L+
Sbjct: 181 RRELY 185
>gi|290461985|gb|ADD24040.1| Splicing factor U2af 38 kDa subunit [Lepeophtheirus salmonis]
Length = 239
Score = 243 bits (620), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 111/187 (59%), Positives = 142/187 (75%), Gaps = 2/187 (1%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC F+FKIGACRHG+RCSR+H KP+ S T++L+N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFFFKIGACRHGERCSRIHNKPTFSQTIVLNNLYINPQNSAK 60
Query: 61 GVDPQGQA-LDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFRE 118
D A + R++Q+H+++F+ED F E KYGE+E +N+CDNL DH+VGNVY++FR
Sbjct: 61 SADGSHMAHVSDREMQEHYDNFFEDCFVEAEDKYGEVEEMNVCDNLGDHLVGNVYIKFRR 120
Query: 119 EEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISR 178
EE A A+ +LN R++ GRPI + SPVTDFREA CRQYE C R G+CNFMHLK ISR
Sbjct: 121 EEDAERAVSDLNNRWFGGRPIYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISR 180
Query: 179 ELRRRLF 185
ELRR L+
Sbjct: 181 ELRRDLY 187
>gi|326432262|gb|EGD77832.1| splicing factor U2af 38 kDa subunit [Salpingoeca sp. ATCC 50818]
Length = 278
Score = 243 bits (620), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 113/195 (57%), Positives = 145/195 (74%), Gaps = 2/195 (1%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA++LASIFGTEKD+VNC FY+KIGACRHGDRCSRLH KP+ S T+LL N+YQ P +
Sbjct: 1 MADYLASIFGTEKDKVNCSFYYKIGACRHGDRCSRLHNKPTFSQTVLLQNLYQNPANMPA 60
Query: 61 GVDPQ-GQALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFRE 118
D + G A+ ++Q++F++F+ DLF EL KYG I +N+CDNL DH+VGNVY+ F+
Sbjct: 61 LSDGRPGCAMTEEELQENFDNFFADLFWELEEKYGPIVDMNVCDNLGDHLVGNVYIMFKN 120
Query: 119 EEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISR 178
EE A A+ +LN R+Y G PI+ + SPVTDF+EA CRQYE C RGG+CNFMHLK +S+
Sbjct: 121 EEDAEKAVEDLNNRWYNGNPIVAELSPVTDFKEACCRQYELGECTRGGFCNFMHLKPLSK 180
Query: 179 ELRRRLFGRSRRRRS 193
+R LFG RR S
Sbjct: 181 SMRDVLFGDRRREVS 195
>gi|241556280|ref|XP_002399674.1| U2 snRNP splicing factor, small subunit, putative [Ixodes
scapularis]
gi|215499705|gb|EEC09199.1| U2 snRNP splicing factor, small subunit, putative [Ixodes
scapularis]
Length = 256
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 116/200 (58%), Positives = 142/200 (71%), Gaps = 15/200 (7%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSR+H KP+ S T+LL N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYHNPQNSAQ 60
Query: 61 GVD-PQGQALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFRE 118
D + ++Q+HF++F+ED+F EL KYGEIE +N+CDNL DH+VGNVYV+FR
Sbjct: 61 TADGSHREKYSSEEMQEHFDNFFEDVFVELEDKYGEIEEMNVCDNLGDHLVGNVYVKFRR 120
Query: 119 EEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENV-------------CNRG 165
EE A A+ +LN R++AG PI + SPVTDFREA CRQYE + C R
Sbjct: 121 EEDAEKAVADLNNRWFAGHPIYSELSPVTDFREACCRQYEMGLKAKTWRTTEASEECTRS 180
Query: 166 GYCNFMHLKKISRELRRRLF 185
G+CNFMHLK ISRELRR L+
Sbjct: 181 GFCNFMHLKPISRELRRELY 200
>gi|307172750|gb|EFN64036.1| Splicing factor U2af 38 kDa subunit [Camponotus floridanus]
gi|307174220|gb|EFN64865.1| Splicing factor U2af 38 kDa subunit [Camponotus floridanus]
Length = 240
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 112/188 (59%), Positives = 139/188 (73%), Gaps = 3/188 (1%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSR+H KP+ S T LL N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTCLLQNLYVNPQNSAK 60
Query: 61 GVDPQGQA--LDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFR 117
D + ++Q+H+++F+ED+F E KYGEIE +N+CDNL DH+VGNVY++FR
Sbjct: 61 SADGSHLVANVSDEEMQEHYDNFFEDVFIECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR 120
Query: 118 EEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIS 177
EE A A+ +LN R++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK IS
Sbjct: 121 REEDAEKAVNDLNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPIS 180
Query: 178 RELRRRLF 185
RELRR L+
Sbjct: 181 RELRRYLY 188
>gi|357618954|gb|EHJ71738.1| putative U2 snrnp auxiliary factor, small subunit [Danaus
plexippus]
Length = 227
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 111/190 (58%), Positives = 140/190 (73%), Gaps = 4/190 (2%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LA+IFGTEKD+VNC FYFKIGACRHGDRCSR+H KP+ S T+LL N+Y P
Sbjct: 1 MAEYLAAIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNPQNSAK 60
Query: 61 GVDPQGQAL---DPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQF 116
D + ++Q+H+++F+ED+F E KYGEIE +N+CDNL DH+VGNVY++F
Sbjct: 61 SADGSHLVVANVSDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKF 120
Query: 117 REEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKI 176
R EE A A+ +LN R++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK I
Sbjct: 121 RREEDAEKAVNDLNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPI 180
Query: 177 SRELRRRLFG 186
SRELRR L+
Sbjct: 181 SRELRRYLYA 190
>gi|405969065|gb|EKC34075.1| Splicing factor U2AF 26 kDa subunit [Crassostrea gigas]
Length = 269
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 116/210 (55%), Positives = 144/210 (68%), Gaps = 24/210 (11%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHG+RCSRLH KP+ S T+L+ N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGERCSRLHNKPTFSQTVLIENLYMNPQNTAL 60
Query: 61 GVD--------PQGQA----------------LDPRKIQDHFEDFYEDLFEELSKYGEIE 96
D QGQ +D ++Q +++F+E+++ EL KYGEIE
Sbjct: 61 TADGSHIVLDDVQGQQDFDDFFEEVFTELEDKMDDTELQQFYDEFFEEVYVELEKYGEIE 120
Query: 97 SLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQ 156
+N+CDNL DH+VGNVYV+FR EE A A+ LN R++ GRP+ + SPVTDFREA CRQ
Sbjct: 121 EMNVCDNLGDHLVGNVYVKFRYEEDAEKAVNELNNRWFNGRPVHAELSPVTDFREACCRQ 180
Query: 157 YEENVCNRGGYCNFMHLKKISRELRRRLFG 186
YE C RGG+CNFMHLK ISRELRR L+G
Sbjct: 181 YEMGECTRGGFCNFMHLKPISRELRRELYG 210
>gi|99014572|emb|CAK22276.1| putative U2 snRNP auxiliary factor [Chenopodium rubrum]
Length = 151
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 115/127 (90%), Positives = 122/127 (96%)
Query: 65 QGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAAN 124
QG A+DPRKIQ+HFEDFYEDLFEEL+KYGEIESLNICDNLADHMVGNVYVQ+REEE AAN
Sbjct: 10 QGNAIDPRKIQEHFEDFYEDLFEELNKYGEIESLNICDNLADHMVGNVYVQYREEEEAAN 69
Query: 125 ALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRL 184
A RNL+GRFYAGRPIIVDFSPVTDFREATCRQYEEN CNRGGYCNFMHLK+ISRELRR+L
Sbjct: 70 AHRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENNCNRGGYCNFMHLKRISRELRRQL 129
Query: 185 FGRSRRR 191
FGR RRR
Sbjct: 130 FGRYRRR 136
>gi|298714129|emb|CBJ27310.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 467
Score = 242 bits (618), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 109/185 (58%), Positives = 141/185 (76%), Gaps = 4/185 (2%)
Query: 2 AEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRP--DMIT 59
AEHLA I GTE+D+VNCPF++KIGACRHGDRCSR H KP S T+L+ N+YQ P ++
Sbjct: 61 AEHLARIHGTEEDKVNCPFFYKIGACRHGDRCSRQHHKPPFSQTILVQNLYQNPVSAVMA 120
Query: 60 PGVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREE 119
G DP L +QD FEDF+E++++ELSK+GEI +N+CDNL DH++GNVYV+F +E
Sbjct: 121 AGGDP--SQLPKDHVQDDFEDFFEEVYQELSKFGEISEMNVCDNLGDHLIGNVYVKFLDE 178
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
E A +AL+ L GR+YA RPI+ +FSPVTDFREA CRQ++E CNRGG CNFMH+K + R
Sbjct: 179 EDADSALKGLMGRWYASRPIMCEFSPVTDFREARCRQFDEGTCNRGGQCNFMHVKPVPRL 238
Query: 180 LRRRL 184
+ L
Sbjct: 239 VMSYL 243
>gi|328785395|ref|XP_397281.4| PREDICTED: splicing factor U2af 38 kDa subunit [Apis mellifera]
gi|340723033|ref|XP_003399903.1| PREDICTED: splicing factor U2af 38 kDa subunit-like [Bombus
terrestris]
gi|350423714|ref|XP_003493568.1| PREDICTED: splicing factor U2af 38 kDa subunit-like [Bombus
impatiens]
gi|380029135|ref|XP_003698237.1| PREDICTED: splicing factor U2af 38 kDa subunit-like [Apis florea]
gi|383858860|ref|XP_003704917.1| PREDICTED: splicing factor U2af 38 kDa subunit-like [Megachile
rotundata]
Length = 241
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 112/188 (59%), Positives = 139/188 (73%), Gaps = 3/188 (1%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSR+H KP+ S T LL N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTCLLQNLYVNPQNSAK 60
Query: 61 GVDPQGQA--LDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFR 117
D + ++Q+H+++F+ED+F E KYGEIE +N+CDNL DH+VGNVY++FR
Sbjct: 61 SADGSHLVANVSDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR 120
Query: 118 EEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIS 177
EE A A+ +LN R++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK IS
Sbjct: 121 REEDAERAVNDLNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPIS 180
Query: 178 RELRRRLF 185
RELRR L+
Sbjct: 181 RELRRYLY 188
>gi|307202736|gb|EFN82027.1| Splicing factor U2af 38 kDa subunit [Harpegnathos saltator]
Length = 240
Score = 242 bits (617), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 112/188 (59%), Positives = 139/188 (73%), Gaps = 3/188 (1%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSR+H KP+ S T LL N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTCLLQNLYVNPQNSAK 60
Query: 61 GVDPQGQA--LDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFR 117
D + ++Q+H+++F+ED+F E KYGEIE +N+CDNL DH+VGNVY++FR
Sbjct: 61 SADGSHLVANVSDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR 120
Query: 118 EEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIS 177
EE A A+ +LN R++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK IS
Sbjct: 121 REEDAERAVNDLNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPIS 180
Query: 178 RELRRRLF 185
RELRR L+
Sbjct: 181 RELRRYLY 188
>gi|357017169|gb|AET50613.1| hypothetical protein [Eimeria tenella]
Length = 252
Score = 242 bits (617), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 134/288 (46%), Positives = 173/288 (60%), Gaps = 40/288 (13%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDM--- 57
MAEHLA I GTE+DRVNCPFY+KIGACRHGD+CSR H KPS SPT++L +MY P +
Sbjct: 1 MAEHLARIIGTEEDRVNCPFYWKIGACRHGDQCSRSHYKPSSSPTIVLRHMYPNPPVAIA 60
Query: 58 ITPGVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFR 117
I G + + LD + DHFE F+ ++FEEL KYGE+E + +CDN+ DH++GNVYV++
Sbjct: 61 IAEGQNVSDELLD--EAADHFEAFFSEVFEELYKYGEVEDMVVCDNIGDHIIGNVYVKYS 118
Query: 118 EEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIS 177
+++ A AL L GR+ AG+PI +F+PVTDFREA CRQ+ + C RGGYCNFMHLK +
Sbjct: 119 DDDAAKKALSALQGRYDAGKPIQAEFTPVTDFREARCRQFVDGQCRRGGYCNFMHLKHVP 178
Query: 178 RELRRRLFGRSRRRRSRSRSRSRSPHKYRGGYEER-SHGGGRGSGRRDDDRDHRLHGRGR 236
R L+R+LF + YEE + GRR R H R
Sbjct: 179 RSLKRKLFNKM--------------------YEEHPEYRQRVRGGRRSRSRSGSPHKHRR 218
Query: 237 RPRSRSPGRRGGRSRSPGARRRSPVRESSVERRAKIEQWNREKEQADS 284
P P R P R +S ERRA I QWN+E++ A S
Sbjct: 219 SPSLHRPER--------------PERRTSEERRAMIAQWNQERDAAQS 252
>gi|307197303|gb|EFN78595.1| Splicing factor U2af 38 kDa subunit [Harpegnathos saltator]
Length = 240
Score = 241 bits (616), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 112/188 (59%), Positives = 139/188 (73%), Gaps = 3/188 (1%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSR+H KP+ S T LL N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTCLLQNLYVNPQNSAK 60
Query: 61 GVDPQGQA--LDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFR 117
D + ++Q+H+++F+ED+F E KYGEIE +N+CDNL DH+VGNVY++FR
Sbjct: 61 SADGSHLVANVTDEEMQEHYDNFFEDVFIECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR 120
Query: 118 EEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIS 177
EE A A+ +LN R++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK IS
Sbjct: 121 REEDAERAVNDLNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPIS 180
Query: 178 RELRRRLF 185
RELRR L+
Sbjct: 181 RELRRYLY 188
>gi|311334534|emb|CBN08648.1| U2 small nuclear RNA auxiliary factor 1 [Microcosmus squamiger]
Length = 206
Score = 241 bits (616), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 110/187 (58%), Positives = 146/187 (78%), Gaps = 3/187 (1%)
Query: 7 SIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQG 66
SIFGTEKD+VNC FYFKIGACRHGDRCSRLH KP+ S T++L +YQ P + V P G
Sbjct: 1 SIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIMLQGLYQNPQINNCAV-PNG 59
Query: 67 QALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREEEHAANA 125
+ D ++Q+H+++F+E++F EL KYG+IE +N+CDNL DH+VGNVY++F +EE A A
Sbjct: 60 EVSD-LEMQEHYDEFFEEVFTELEDKYGDIEEMNVCDNLGDHLVGNVYIKFHKEEDAEKA 118
Query: 126 LRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLF 185
+ +LN R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISR+LRR+L+
Sbjct: 119 VNDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRDLRRKLY 178
Query: 186 GRSRRRR 192
GR + ++
Sbjct: 179 GRRKEKK 185
>gi|1621615|gb|AAB17271.1| U2 snRNP auxiliary factor [Drosophila melanogaster]
Length = 264
Score = 241 bits (616), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 111/188 (59%), Positives = 138/188 (73%), Gaps = 3/188 (1%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSR+H KP+ S T+LL N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNPQNSAK 60
Query: 61 GVDPQGQA--LDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFR 117
D + ++Q+H+++F+ED+F E KYGEIE +N+CDNL DH+VGNVY++FR
Sbjct: 61 SADGSDLVANVSDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR 120
Query: 118 EEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIS 177
E A A +LN R++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK IS
Sbjct: 121 NEADAEKAANDLNNRWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPIS 180
Query: 178 RELRRRLF 185
RELRR L+
Sbjct: 181 RELRRYLY 188
>gi|307170197|gb|EFN62583.1| Splicing factor U2af 38 kDa subunit [Camponotus floridanus]
gi|332029584|gb|EGI69473.1| Splicing factor U2af 38 kDa subunit [Acromyrmex echinatior]
Length = 240
Score = 241 bits (616), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 112/188 (59%), Positives = 139/188 (73%), Gaps = 3/188 (1%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSR+H KP+ S T LL N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTCLLQNLYVNPQNSAK 60
Query: 61 GVDPQGQA--LDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFR 117
D + ++Q+H+++F+ED+F E KYGEIE +N+CDNL DH+VGNVY++FR
Sbjct: 61 SADGSHLVANVSDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR 120
Query: 118 EEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIS 177
EE A A+ +LN R++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK IS
Sbjct: 121 REEDAERAVNDLNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPIS 180
Query: 178 RELRRRLF 185
RELRR L+
Sbjct: 181 RELRRYLY 188
>gi|91089827|ref|XP_969424.1| PREDICTED: similar to AGAP002956-PA [Tribolium castaneum]
Length = 227
Score = 241 bits (616), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 112/188 (59%), Positives = 139/188 (73%), Gaps = 3/188 (1%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSR+H KP+ S T LL N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTCLLQNLYVNPQNSAK 60
Query: 61 GVDPQGQA--LDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFR 117
D + ++Q+H+++F+ED+F E KYGEIE +N+CDNL DH+VGNVY++FR
Sbjct: 61 SADGSHLVANVSDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR 120
Query: 118 EEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIS 177
EE A A+ +LN R++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK IS
Sbjct: 121 REEDAERAVNDLNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPIS 180
Query: 178 RELRRRLF 185
RELRR L+
Sbjct: 181 RELRRYLY 188
>gi|340377156|ref|XP_003387096.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like [Amphimedon
queenslandica]
Length = 227
Score = 241 bits (615), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 114/187 (60%), Positives = 143/187 (76%), Gaps = 4/187 (2%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHG+RCSRLH KP+ S T++L NMYQ P+ T
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGERCSRLHNKPTFSQTIVLQNMYQNPNNSTQ 60
Query: 61 GVDPQG-QALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFRE 118
+P G + P Q H+E+F+ED+F E KYG IE +N+CDNL DH+VGNVY++FR
Sbjct: 61 --NPSGLMTVSPEVEQAHYEEFFEDVFIECEEKYGPIEKMNVCDNLGDHLVGNVYIKFRF 118
Query: 119 EEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISR 178
EE A A+++LN R++ G PI + SPVTDF+EA CRQY+ C RGG+CNFMHLK ISR
Sbjct: 119 EEDAEKAVQSLNNRWFNGHPIHAELSPVTDFKEACCRQYDMGECTRGGFCNFMHLKPISR 178
Query: 179 ELRRRLF 185
EL+R L+
Sbjct: 179 ELKRFLY 185
>gi|428167701|gb|EKX36656.1| hypothetical protein GUITHDRAFT_78757 [Guillardia theta CCMP2712]
Length = 216
Score = 241 bits (615), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 113/182 (62%), Positives = 138/182 (75%), Gaps = 3/182 (1%)
Query: 1 MAEHLASIFGTEKDR-VNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPD--M 57
MA+ LASI GTE DR VNCPFYFK+GACRHGDRCSR H KP S T+LLS+MYQ P
Sbjct: 1 MADRLASIHGTELDRLVNCPFYFKVGACRHGDRCSRQHNKPLFSQTVLLSHMYQAPASAQ 60
Query: 58 ITPGVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFR 117
+ G A D + QDHF++FYE+++EEL K+G+IE LN+C NL DHM+GNVYV++
Sbjct: 61 MMSGPTAMATAADDKASQDHFDEFYEEVYEELEKFGKIEELNVCANLGDHMIGNVYVKYE 120
Query: 118 EEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIS 177
EEE A AL LNGRFYAGR I+ ++SPVTDFRE+ CRQYEE C GG+CNFMH+K+ S
Sbjct: 121 EEEQAEKALNALNGRFYAGRLIMAEYSPVTDFRESRCRQYEETQCKYGGHCNFMHIKRPS 180
Query: 178 RE 179
+E
Sbjct: 181 KE 182
>gi|17137284|ref|NP_477208.1| U2 small nuclear riboprotein auxiliary factor 38, isoform A
[Drosophila melanogaster]
gi|442624928|ref|NP_001259814.1| U2 small nuclear riboprotein auxiliary factor 38, isoform B
[Drosophila melanogaster]
gi|14286185|sp|Q94535.2|U2AF1_DROME RecName: Full=Splicing factor U2af 38 kDa subunit; AltName: Full=U2
auxiliary factor 38 kDa subunit; AltName: Full=U2 snRNP
auxiliary factor small subunit
gi|7296221|gb|AAF51512.1| U2 small nuclear riboprotein auxiliary factor 38, isoform A
[Drosophila melanogaster]
gi|16197991|gb|AAL13766.1| LD24048p [Drosophila melanogaster]
gi|220947574|gb|ACL86330.1| U2af38-PA [synthetic construct]
gi|440213060|gb|AGB92351.1| U2 small nuclear riboprotein auxiliary factor 38, isoform B
[Drosophila melanogaster]
Length = 264
Score = 241 bits (615), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 111/188 (59%), Positives = 138/188 (73%), Gaps = 3/188 (1%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSR+H KP+ S T+LL N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNPQNSAK 60
Query: 61 GVDPQGQA--LDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFR 117
D + ++Q+H+++F+ED+F E KYGEIE +N+CDNL DH+VGNVY++FR
Sbjct: 61 SADGSHLVANVSDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR 120
Query: 118 EEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIS 177
E A A +LN R++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK IS
Sbjct: 121 NEADAEKAANDLNNRWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPIS 180
Query: 178 RELRRRLF 185
RELRR L+
Sbjct: 181 RELRRYLY 188
>gi|195470226|ref|XP_002087409.1| GE16227 [Drosophila yakuba]
gi|194173510|gb|EDW87121.1| GE16227 [Drosophila yakuba]
Length = 267
Score = 241 bits (615), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 111/188 (59%), Positives = 138/188 (73%), Gaps = 3/188 (1%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSR+H KP+ S T+LL N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNPQNSAK 60
Query: 61 GVDPQGQA--LDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFR 117
D + ++Q+H+++F+ED+F E KYGEIE +N+CDNL DH+VGNVY++FR
Sbjct: 61 SADGSHLVANVSDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR 120
Query: 118 EEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIS 177
E A A +LN R++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK IS
Sbjct: 121 NEADAEKAANDLNNRWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPIS 180
Query: 178 RELRRRLF 185
RELRR L+
Sbjct: 181 RELRRYLY 188
>gi|195350065|ref|XP_002041562.1| GM16679 [Drosophila sechellia]
gi|195575511|ref|XP_002077621.1| GD22967 [Drosophila simulans]
gi|194123335|gb|EDW45378.1| GM16679 [Drosophila sechellia]
gi|194189630|gb|EDX03206.1| GD22967 [Drosophila simulans]
Length = 263
Score = 241 bits (615), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 111/188 (59%), Positives = 138/188 (73%), Gaps = 3/188 (1%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSR+H KP+ S T+LL N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNPQNSAK 60
Query: 61 GVDPQGQA--LDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFR 117
D + ++Q+H+++F+ED+F E KYGEIE +N+CDNL DH+VGNVY++FR
Sbjct: 61 SADGSHLVANVSDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR 120
Query: 118 EEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIS 177
E A A +LN R++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK IS
Sbjct: 121 NEADAEKAANDLNNRWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPIS 180
Query: 178 RELRRRLF 185
RELRR L+
Sbjct: 181 RELRRYLY 188
>gi|194853379|ref|XP_001968154.1| GG24659 [Drosophila erecta]
gi|190660021|gb|EDV57213.1| GG24659 [Drosophila erecta]
Length = 266
Score = 241 bits (615), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 111/188 (59%), Positives = 138/188 (73%), Gaps = 3/188 (1%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSR+H KP+ S T+LL N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNPQNSAK 60
Query: 61 GVDPQGQA--LDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFR 117
D + ++Q+H+++F+ED+F E KYGEIE +N+CDNL DH+VGNVY++FR
Sbjct: 61 SADGSHLVANVSDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR 120
Query: 118 EEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIS 177
E A A +LN R++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK IS
Sbjct: 121 NEADAEKAANDLNNRWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPIS 180
Query: 178 RELRRRLF 185
RELRR L+
Sbjct: 181 RELRRYLY 188
>gi|444514071|gb|ELV10521.1| Splicing factor U2AF 35 kDa subunit [Tupaia chinensis]
Length = 229
Score = 241 bits (614), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 112/185 (60%), Positives = 139/185 (75%), Gaps = 1/185 (0%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLH +P+ S T+ L N+Y+ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNRPTFSQTVALLNVYRNPQNSCQ 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREE 119
D A ++Q H+ +F++++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR E
Sbjct: 61 SADRSRCAGSDAEMQQHYHEFFQEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE 120
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
E A A+ +LN R++ GRPI + SPVTDFREA CRQYE C RGG+CNFMHLK ISRE
Sbjct: 121 EDAEKAVVDLNNRWFHGRPIYAELSPVTDFREACCRQYETGECARGGFCNFMHLKPISRE 180
Query: 180 LRRRL 184
LRR L
Sbjct: 181 LRREL 185
>gi|332020538|gb|EGI60953.1| Splicing factor U2af 38 kDa subunit [Acromyrmex echinatior]
Length = 240
Score = 241 bits (614), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 111/188 (59%), Positives = 139/188 (73%), Gaps = 3/188 (1%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSR+H KP+ S T LL N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTCLLQNLYVNPQNSAK 60
Query: 61 GVDPQGQA--LDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFR 117
D + ++Q+H+++F+ED+F E KYGEIE +N+CDNL DH+VGNVY++FR
Sbjct: 61 SADGSHLVANVSDEEMQEHYDNFFEDVFIECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR 120
Query: 118 EEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIS 177
EE A A+ +LN R++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK IS
Sbjct: 121 REEDAERAVNDLNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPIS 180
Query: 178 RELRRRLF 185
R+LRR L+
Sbjct: 181 RDLRRYLY 188
>gi|239790945|dbj|BAH72001.1| ACYPI001339 [Acyrthosiphon pisum]
Length = 214
Score = 241 bits (614), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 111/184 (60%), Positives = 138/184 (75%), Gaps = 3/184 (1%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSR+H KP+ S T+LL N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNPQNSAK 60
Query: 61 GVDPQGQA--LDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFR 117
D + ++Q+H+++F+ED+F E KYGEIE +N+CDNL DH+VGNVY++FR
Sbjct: 61 SADGSHLVSNVTDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR 120
Query: 118 EEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIS 177
EEHA A+ +LN R++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK IS
Sbjct: 121 REEHAEAAVNDLNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPIS 180
Query: 178 RELR 181
RELR
Sbjct: 181 RELR 184
>gi|432095948|gb|ELK26863.1| Splicing factor U2AF 35 kDa subunit [Myotis davidii]
Length = 248
Score = 240 bits (613), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 112/185 (60%), Positives = 141/185 (76%), Gaps = 1/185 (0%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIF TEKD+VNC FYFKIGACRHGDRCSRLH KP+ S T+ L N+Y+ P +
Sbjct: 1 MAEYLASIFHTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPKNSSQ 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREE 119
D A+ ++Q+H++ F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR E
Sbjct: 61 SADGLRCAVSDVEMQEHYDAFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE 120
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
E A A+ +LN R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISRE
Sbjct: 121 EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE 180
Query: 180 LRRRL 184
LRR L
Sbjct: 181 LRREL 185
>gi|77736499|ref|NP_001029950.1| splicing factor U2AF 26 kDa subunit [Bos taurus]
gi|426242747|ref|XP_004015232.1| PREDICTED: splicing factor U2AF 26 kDa subunit isoform 1 [Ovis
aries]
gi|122146166|sp|Q3T127.1|U2AF4_BOVIN RecName: Full=Splicing factor U2AF 26 kDa subunit; AltName: Full=U2
small nuclear RNA auxiliary factor 1-like protein 4
gi|74354897|gb|AAI02152.1| Transmembrane protein 149 [Bos taurus]
gi|296477857|tpg|DAA19972.1| TPA: splicing factor U2AF 26 kDa subunit [Bos taurus]
gi|440894920|gb|ELR47238.1| Splicing factor U2AF 26 kDa subunit [Bos grunniens mutus]
Length = 220
Score = 240 bits (613), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 109/186 (58%), Positives = 142/186 (76%), Gaps = 1/186 (0%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLH KP+ S T++L N+Y+ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIVLLNLYRNPQNTAQ 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREE 119
D + ++Q+H+++F+E++F EL KYGEIE +N+CDNL DH+VGNVYV+FR E
Sbjct: 61 TADGSHCHVSDVEVQEHYDNFFEEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRRE 120
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
E A A+ LN R++ G+ + + SPVTDFRE+ CRQYE C RGG+CNFMHL+ ISR+
Sbjct: 121 EDAERAVVELNNRWFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISRD 180
Query: 180 LRRRLF 185
LRR+L+
Sbjct: 181 LRRQLY 186
>gi|311257402|ref|XP_003127103.1| PREDICTED: splicing factor U2AF 26 kDa subunit-like isoform 1 [Sus
scrofa]
Length = 220
Score = 240 bits (612), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 109/186 (58%), Positives = 141/186 (75%), Gaps = 1/186 (0%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLH KP+ S T++L N+Y+ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIVLLNLYRNPQNTAQ 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREE 119
D + ++Q+H+++F+E++F EL KYGEIE +N+CDNL DH+VGNVYV+FR E
Sbjct: 61 TADGSHCHVSDVEVQEHYDNFFEEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRRE 120
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
E A A+ LN R++ G+ + + SPVTDFRE+ CRQYE C RGG+CNFMHL+ ISR
Sbjct: 121 EDAERAVAELNNRWFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISRN 180
Query: 180 LRRRLF 185
LRR+L+
Sbjct: 181 LRRQLY 186
>gi|301771073|ref|XP_002920964.1| PREDICTED: splicing factor U2AF 26 kDa subunit-like [Ailuropoda
melanoleuca]
gi|338709979|ref|XP_003362292.1| PREDICTED: splicing factor U2AF 26 kDa subunit-like isoform 2
[Equus caballus]
Length = 220
Score = 240 bits (612), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 109/186 (58%), Positives = 141/186 (75%), Gaps = 1/186 (0%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLH KP+ S T++L N+Y+ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIVLLNLYRNPQNTAQ 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREE 119
D + ++Q+H+++F+E++F EL KYGEIE +N+CDNL DH+VGNVYV+FR E
Sbjct: 61 TADGSHCHVSDVEVQEHYDNFFEEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRRE 120
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
E A A+ LN R++ G+ + + SPVTDFRE+ CRQYE C RGG+CNFMHL+ ISR
Sbjct: 121 EDAERAVAELNNRWFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISRN 180
Query: 180 LRRRLF 185
LRR+L+
Sbjct: 181 LRRQLY 186
>gi|156098591|ref|XP_001615311.1| U2 snRNP auxiliary factor, small subunit [Plasmodium vivax Sal-1]
gi|148804185|gb|EDL45584.1| U2 snRNP auxiliary factor, small subunit, putative [Plasmodium
vivax]
Length = 316
Score = 240 bits (612), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 144/312 (46%), Positives = 199/312 (63%), Gaps = 22/312 (7%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDM--- 57
MAEHLA I GTE+DRVNCPF++KIGACRHGD+CSR H KP+ + TL++ +MY P M
Sbjct: 1 MAEHLARIIGTEEDRVNCPFFWKIGACRHGDQCSRSHYKPNSAQTLVIRHMYDNPPMAVA 60
Query: 58 ITPGVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFR 117
I G + + LD K DHFE+FYE++FEEL KYGEIE + +CDN+ DH++GNVY+++
Sbjct: 61 IAEGQMVEDEVLD--KAADHFEEFYEEVFEELMKYGEIEDMVVCDNIGDHIIGNVYIKYT 118
Query: 118 EEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIS 177
E++A A++ LNGRFYAG+P+ ++++PVTDFREA CRQ+ + C RGGYCNFMH+K +
Sbjct: 119 HEDYAEKAVKELNGRFYAGKPLQIEYTPVTDFREARCRQFVDGQCRRGGYCNFMHIKHVP 178
Query: 178 RELRRRLFGRSRRRRSRSRSRSRSPHKYRGGYEERSH--GGGRGSGRRD---DDRDHRLH 232
R ++R+L+ R ++ + R ++ GY + SH G R RRD D
Sbjct: 179 RAVKRKLYKRMYKKFPEYKKRRKTKDGSEDGYHD-SHRDRGSRDKHRRDKYGDSHHSSRR 237
Query: 233 GRGRRPRSRSPGRRGGRSRSPGARRRSPVRESSVERRAKIEQWNREKEQADSGNKVDNSS 292
R RSR+ G S R + P RE+S ERR KIE+WN+E+E
Sbjct: 238 RNRSRSRSRNRDDADGDSDGASRRHKHPRRENSAERREKIERWNKEREMK---------- 287
Query: 293 YNDDRNDDDRDG 304
N R+DD++D
Sbjct: 288 -NMQRDDDEQDA 298
>gi|328770702|gb|EGF80743.1| hypothetical protein BATDEDRAFT_11284 [Batrachochytrium
dendrobatidis JAM81]
Length = 240
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 116/213 (54%), Positives = 149/213 (69%), Gaps = 19/213 (8%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
A+HLASI+GTEKD+VNC FYFKIGACRHGDRCSR H KP+ S TLL+ N+Y + P
Sbjct: 1 FADHLASIYGTEKDKVNCSFYFKIGACRHGDRCSRKHVKPNFSQTLLIPNLY-----LNP 55
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
+P G + P +IQ++F+ +EDLF EL+KYGE+E +NICDN+ DH++GNVY +F+ EE
Sbjct: 56 AHNP-GCTMTPDEIQENFDLLFEDLFMELAKYGELEDMNICDNVGDHLIGNVYARFKYEE 114
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A NA+ +LN RFYAGRP+ + SPVTDF EA CRQYE C RGG+CNFMH+KK S+ +
Sbjct: 115 DAGNAVESLNNRFYAGRPLYAELSPVTDFGEACCRQYELGECTRGGFCNFMHIKKPSKAM 174
Query: 181 RRRLFGRSRRR-------------RSRSRSRSR 200
+ ++ R RSRS SR R
Sbjct: 175 IKDMYKAQRLSIKILKPRGDEDDGRSRSHSRER 207
>gi|403348419|gb|EJY73647.1| U2 snRNP auxiliary factor, small subunit, putative [Oxytricha
trifallax]
Length = 386
Score = 239 bits (610), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 110/211 (52%), Positives = 145/211 (68%), Gaps = 7/211 (3%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA+ LA IFGTE+D+VNCPFYFKIGACRHGD C+R+H KP +S TL L ++Y+ P
Sbjct: 1 MADRLAKIFGTEEDKVNCPFYFKIGACRHGDTCTRIHNKPPLSQTLALPHLYENPPAAVA 60
Query: 61 GVD----PQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQF 116
D PQ ++ +HFEDF+E++F EL+K+GE+E + + DN+ DHM+GNVYV+F
Sbjct: 61 FADGLNVPQDALVEA---VNHFEDFFEEVFGELAKFGELEEVIVADNIGDHMIGNVYVKF 117
Query: 117 REEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKI 176
EE A +A LNGR+YAGR I+ ++SPVTDFRE+ CRQY E C+RGGYCNFMH K +
Sbjct: 118 VTEEQAQSAFNGLNGRYYAGRVILAEYSPVTDFRESKCRQYNEGQCDRGGYCNFMHPKHV 177
Query: 177 SRELRRRLFGRSRRRRSRSRSRSRSPHKYRG 207
S++L+R LF R R + RG
Sbjct: 178 SKDLKRALFKSMYDEHPEYREHRREQEQLRG 208
>gi|410906165|ref|XP_003966562.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 1
[Takifugu rubripes]
Length = 223
Score = 239 bits (610), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 111/187 (59%), Positives = 141/187 (75%), Gaps = 5/187 (2%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLH KP+ S T+L+ N+Y+ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRNPQNSAQ 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEEL-SKYGEIESLNICDNLADHMVGNVYVQFREE 119
D A+ ++Q+H+++F+E++F E+ KYGE+E +N+CDNL DH+VGN FR E
Sbjct: 61 TADASRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGN----FRRE 116
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
E A A+ +LN R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISRE
Sbjct: 117 EDAEKAVMDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE 176
Query: 180 LRRRLFG 186
LRR L+G
Sbjct: 177 LRRELYG 183
>gi|355755732|gb|EHH59479.1| U2 auxiliary factor 26 [Macaca fascicularis]
Length = 220
Score = 239 bits (609), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 111/197 (56%), Positives = 145/197 (73%), Gaps = 1/197 (0%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
M E+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLH KP+ S T++L N+Y+ P
Sbjct: 1 MGEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIVLLNLYRNPQNTAQ 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREE 119
D + ++Q+H++ F+E++F EL KYGEIE +N+CD+L DH+VGNVYV+FR E
Sbjct: 61 TADGSHCHVSDVEVQEHYDSFFEEVFTELQEKYGEIEEMNMCDDLGDHLVGNVYVKFRRE 120
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
E A A+ LN R++ G+ + + SPVTDFRE+ CRQYE C RGG+CNFMHL+ IS+
Sbjct: 121 EDAERAVAELNNRWFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISQN 180
Query: 180 LRRRLFGRSRRRRSRSR 196
L R+L+G+ RRRS R
Sbjct: 181 LWRQLYGQGPRRRSPPR 197
>gi|93003154|tpd|FAA00160.1| TPA: zinc finger protein [Ciona intestinalis]
Length = 218
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 125/216 (57%), Positives = 161/216 (74%), Gaps = 9/216 (4%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHG+RCSRLH KP+ S T++L +YQ P +
Sbjct: 6 MAEYLASIFGTEKDKVNCSFYFKIGACRHGERCSRLHNKPTFSQTIVLQGLYQNPQINNT 65
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREE 119
G+ G D ++Q+H+++F+E++F EL KYG IE +N+CDNL DH+VGNVY++F +E
Sbjct: 66 GI---GTVSDV-EMQEHYDNFFEEVFVELEEKYGSIEEMNVCDNLGDHLVGNVYIKFHKE 121
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
E A A+ +LN R++ G+PI+ + S VTDFREA CRQYE C RGG+CNFMHLK ISRE
Sbjct: 122 EDAEKAVNDLNNRWFNGQPIMSELSTVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE 181
Query: 180 LRRRLFGRSRRRRSRSRSRSRSPHKYRGGYEERSHG 215
LRRRL+GR +++ RSRS RGG ER HG
Sbjct: 182 LRRRLYGRKEKKK---RSRSPPTRNRRGGSRER-HG 213
>gi|221056112|ref|XP_002259194.1| U2 snRNP auxiliary factor, small subunit [Plasmodium knowlesi
strain H]
gi|193809265|emb|CAQ39967.1| U2 snRNP auxiliary factor, small subunit,putative [Plasmodium
knowlesi strain H]
Length = 308
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 136/300 (45%), Positives = 191/300 (63%), Gaps = 9/300 (3%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDM--- 57
MAEHLA I GTE+DRVNCPF++KIGACRHGD+CSR H KP+ + TL++ +MY P M
Sbjct: 1 MAEHLARIIGTEEDRVNCPFFWKIGACRHGDQCSRSHYKPNSAQTLVIRHMYDNPPMAVA 60
Query: 58 ITPGVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFR 117
I G + + LD K DHFE+FYE++FEEL KYGEIE + +CDN+ DH++GNVY+++
Sbjct: 61 IAEGQMVEDEVLD--KAADHFEEFYEEVFEELMKYGEIEDMVVCDNIGDHIIGNVYIKYT 118
Query: 118 EEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIS 177
E++A A++ LNGRFYAG+P+ ++++PVTDFREA CRQ+ + C RGGYCNFMH+K +
Sbjct: 119 HEDYAEKAVKELNGRFYAGKPLQIEYTPVTDFREARCRQFVDGQCRRGGYCNFMHIKHVP 178
Query: 178 RELRRRLFGRSRRRRSRSRSRSRSPHKYRGG-YEERSHGGGRGSGRRDD--DRDHRLHGR 234
R ++R+L+ R ++ + R ++ G Y+ G R RRD D H R
Sbjct: 179 RSVKRKLYKRMYKKFPEYKKRRKTKDGSEDGHYDSHRDRGTRDKHRRDKYGDSYHSSRRR 238
Query: 235 GRRPRSRSPGRRGGRSRSPGARR-RSPVRESSVERRAKIEQWNREKEQADSGNKVDNSSY 293
R +RR + P RE+S ERR KIE+WN+E+E + D+ +
Sbjct: 239 NRSRSRSRNRDDADGDSDGASRRHKYPRRENSAERREKIERWNKEREMKNMQKDDDDEQH 298
>gi|66361760|ref|XP_627402.1| U2AG splicing factor U2AF U2snRNP auxilliary factor small subunit
CCCh+RRM+CCCh-like [Cryptosporidium parvum Iowa II]
gi|46228867|gb|EAK89737.1| U2AG splicing factor U2AF U2snRNP auxilliary factor small subunit
CCCh+RRM+CCCh-like [Cryptosporidium parvum Iowa II]
Length = 256
Score = 238 bits (607), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 126/283 (44%), Positives = 170/283 (60%), Gaps = 42/283 (14%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDM--- 57
MAEHLA I GTE+DRVNCPFY+KIGACRHGD+CSR H KP+ SPT+++ ++Y+ +
Sbjct: 8 MAEHLARILGTEEDRVNCPFYWKIGACRHGDQCSRNHYKPTSSPTVIIRHIYENSPVALA 67
Query: 58 ITPGVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFR 117
I G + + D D E FYE++F+ELSKYGEI L ICDN+ DHM+GNVY++F
Sbjct: 68 IAEGQEVSDKLADEE--SDKVEVFYEEMFKELSKYGEILELLICDNIGDHMIGNVYIRFS 125
Query: 118 EEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIS 177
EE+A AL NL G+ YAG+PI ++ SPV+DF+EA CRQY + CNRGGYCNFMH+K +
Sbjct: 126 TEEYAKTALANLRGKMYAGKPINIELSPVSDFKEARCRQYIDGCCNRGGYCNFMHIKHVP 185
Query: 178 RELRRRLFGRSRRRRSRSRSRSRSPHKYRGGYEERSHGGGRGSGRRDDDRDHRLHGRGRR 237
R ++ ++F + R +++ G+ S R D G+G
Sbjct: 186 RCVKDKIFDQMYSEHPEYLHR-------------KTNSCGKSSARDD--------GKG-- 222
Query: 238 PRSRSPGRRGGRSRSPGARRRSPVRESSVERRAKIEQWNREKE 280
S +R R R+SS ERR IE WN+ +E
Sbjct: 223 --------------SESSRPRKFQRQSSEERRLMIESWNKRRE 251
>gi|56202175|dbj|BAD73653.1| U2 auxiliary factor small chain-like [Oryza sativa Japonica Group]
Length = 258
Score = 238 bits (607), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 141/263 (53%), Positives = 169/263 (64%), Gaps = 33/263 (12%)
Query: 26 ACRHGDRCS--RLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKIQDHFEDFYE 83
AC G + L +P+ISPT++ +NMYQRPDMITPGVD QGQ +DPR++Q+HFEDFYE
Sbjct: 19 ACLRGGKTGSGMLSVRPTISPTVVFANMYQRPDMITPGVDAQGQPIDPRQMQEHFEDFYE 78
Query: 84 DLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVDF 143
D+FEELSK+GEIE+LN+CDNLADHM+GNVYVQFREE+ AA A L GRFY+GRPIIVDF
Sbjct: 79 DIFEELSKFGEIENLNVCDNLADHMIGNVYVQFREEDQAAAAHTALQGRFYSGRPIIVDF 138
Query: 144 SPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRRRR-----SRSRSR 198
SPVTDFREATCRQ + R+LR++LFG R+ + S S S
Sbjct: 139 SPVTDFREATCRQL-----------------GLGRDLRKKLFGHYRKPQRGRSRSPSPSP 181
Query: 199 SRSPHKYRGGYEERSHGGGRGSGRRDDDRDHRLHGRGRRPRSRSPGRRGGRSRSPGARRR 258
++ G GRR H H G R R GG SP R R
Sbjct: 182 RHRRERHDRDDYRGRDDYSGGGGRRGGSSRHERHDDGGR------RRHGG---SPPRRAR 232
Query: 259 SPVRESSVERRAKIEQWNREKEQ 281
SPVRESS ERRAKIEQWNRE+++
Sbjct: 233 SPVRESSEERRAKIEQWNRERDE 255
>gi|67624011|ref|XP_668288.1| U2 snRNP auxiliary factor, small subunit [Cryptosporidium hominis
TU502]
gi|54659468|gb|EAL38043.1| U2 snRNP auxiliary factor, small subunit [Cryptosporidium hominis]
Length = 247
Score = 238 bits (607), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 126/283 (44%), Positives = 170/283 (60%), Gaps = 42/283 (14%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDM--- 57
MAEHLA I GTE+DRVNCPFY+KIGACRHGD+CSR H KP+ SPT+++ ++Y+ +
Sbjct: 1 MAEHLARILGTEEDRVNCPFYWKIGACRHGDQCSRNHYKPTSSPTVIIRHIYENSPVALA 60
Query: 58 ITPGVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFR 117
I G + + D D E FYE++F+ELSKYGEI L ICDN+ DHM+GNVY++F
Sbjct: 61 IAEGQEVSDKLADEE--SDKVEVFYEEIFKELSKYGEILELLICDNIGDHMIGNVYIRFS 118
Query: 118 EEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIS 177
EE+A AL NL G+ YAG+PI ++ SPV+DF+EA CRQY + CNRGGYCNFMH+K +
Sbjct: 119 TEEYAKTALLNLRGKLYAGKPINIELSPVSDFKEARCRQYIDGCCNRGGYCNFMHIKHVP 178
Query: 178 RELRRRLFGRSRRRRSRSRSRSRSPHKYRGGYEERSHGGGRGSGRRDDDRDHRLHGRGRR 237
R ++ ++F + R +++ G+ S R D G+G
Sbjct: 179 RCVKDKIFDQMYSEHPEYLHR-------------KTNSCGKSSARDD--------GKG-- 215
Query: 238 PRSRSPGRRGGRSRSPGARRRSPVRESSVERRAKIEQWNREKE 280
S +R R R+SS ERR IE WN+ +E
Sbjct: 216 --------------SESSRPRKFQRQSSEERRLMIESWNKRRE 244
>gi|389583734|dbj|GAB66468.1| U2 snRNP auxiliary factor small subunit, partial [Plasmodium
cynomolgi strain B]
Length = 307
Score = 237 bits (604), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 137/295 (46%), Positives = 191/295 (64%), Gaps = 21/295 (7%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDM--- 57
MAEHLA I GTE+DRVNCPF++KIGACRHGD+CSR H KP+ + TL++ +MY P M
Sbjct: 1 MAEHLARIIGTEEDRVNCPFFWKIGACRHGDQCSRSHYKPNSAQTLVIRHMYDNPPMAVA 60
Query: 58 ITPGVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFR 117
I G + + LD K DHFE+FYE++FEEL KYGEIE + +CDN+ DH++GNVY+++
Sbjct: 61 IAEGQMVEDEVLD--KAADHFEEFYEEVFEELMKYGEIEDMVVCDNIGDHIIGNVYIKYT 118
Query: 118 EEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIS 177
E++A A++ LNGRFYAG+P+ ++++PVTDFREA CRQ+ + C RGGYCNFMH+K +
Sbjct: 119 HEDYAEKAVKELNGRFYAGKPLQIEYTPVTDFREARCRQFVDGQCRRGGYCNFMHIKHVP 178
Query: 178 RELRRRLFGRSRRRRSRSRSRSRSPHKYRGGYEERSHGGGRGSGRRDDDRDHRL------ 231
R ++R+L+ R ++ + R ++ + G E+ H R G RD R +
Sbjct: 179 RAVKRKLYKRMYKKFPEYKKRRKT----KDGSEDGHHDSHRDRGSRDKHRRDKYGDSHHS 234
Query: 232 ------HGRGRRPRSRSPGRRGGRSRSPGARRRSPVRESSVERRAKIEQWNREKE 280
R RSR+ G S R + P RE+S ERR KIE+WN+E+E
Sbjct: 235 SRRRNRSRSRSRNRSRNRDDADGDSDGASRRHKHPRRENSAERREKIERWNKERE 289
>gi|195155565|ref|XP_002018674.1| GL25824 [Drosophila persimilis]
gi|194114827|gb|EDW36870.1| GL25824 [Drosophila persimilis]
Length = 309
Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 107/182 (58%), Positives = 133/182 (73%), Gaps = 3/182 (1%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSR+H KP+ S T+LL N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNPQNSAK 60
Query: 61 GVDPQGQA--LDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFR 117
D + ++Q+H+++F+ED+F E KYGEIE +N+CDNL DH+VGNVY++FR
Sbjct: 61 SADGSHLVANVSDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR 120
Query: 118 EEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIS 177
E A A +LN R++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK IS
Sbjct: 121 NEADAEKAANDLNNRWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPIS 180
Query: 178 RE 179
RE
Sbjct: 181 RE 182
>gi|118781916|ref|XP_311943.3| AGAP002956-PA [Anopheles gambiae str. PEST]
gi|116129321|gb|EAA08115.3| AGAP002956-PA [Anopheles gambiae str. PEST]
Length = 251
Score = 234 bits (597), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 108/182 (59%), Positives = 134/182 (73%), Gaps = 3/182 (1%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSR+H KP+ S T LL N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTCLLQNLYVNPQNSAK 60
Query: 61 GVDPQGQA--LDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFR 117
D + ++Q+H+++F+ED+F E KYGEIE +N+CDNL DH+VGNVY++FR
Sbjct: 61 SADGSHLVANVSDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR 120
Query: 118 EEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIS 177
EE A A ++LN R++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK IS
Sbjct: 121 REEDAERAAKDLNNRWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPIS 180
Query: 178 RE 179
RE
Sbjct: 181 RE 182
>gi|242014352|ref|XP_002427855.1| Splicing factor U2Af 38 kDa subunit, putative [Pediculus humanus
corporis]
gi|212512324|gb|EEB15117.1| Splicing factor U2Af 38 kDa subunit, putative [Pediculus humanus
corporis]
Length = 253
Score = 234 bits (597), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 108/182 (59%), Positives = 134/182 (73%), Gaps = 3/182 (1%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSR+H KP+ S T LL N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTTLLQNLYVNPQNSAK 60
Query: 61 GVDPQGQA--LDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFR 117
D + ++Q+H+++F+ED+F E KYGEIE +N+CDNL DH+VGNVY++FR
Sbjct: 61 SADGSHLVANVSDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR 120
Query: 118 EEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIS 177
EE A A+ +LN R++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK IS
Sbjct: 121 REEDAEKAVNDLNNRWFGGRPVYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPIS 180
Query: 178 RE 179
RE
Sbjct: 181 RE 182
>gi|12842455|dbj|BAB25609.1| unnamed protein product [Mus musculus]
Length = 239
Score = 234 bits (596), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 107/178 (60%), Positives = 137/178 (76%), Gaps = 1/178 (0%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLH KP+ S T+ L N+Y+ P +
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQ 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREE 119
D A+ ++Q+H+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR E
Sbjct: 61 SADGLRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE 120
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIS 177
E A A+ +LN R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK IS
Sbjct: 121 EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPIS 178
>gi|19115857|ref|NP_594945.1| U2AF small subunit, U2AF-23 [Schizosaccharomyces pombe 972h-]
gi|6136086|sp|Q09176.2|U2AF1_SCHPO RecName: Full=Splicing factor U2AF 23 kDa subunit; AltName: Full=U2
auxiliary factor 23 kDa subunit; Short=U2AF23; AltName:
Full=U2 snRNP auxiliary factor small subunit
gi|2347143|gb|AAC49805.1| spU2AF23 [Schizosaccharomyces pombe]
gi|5834791|emb|CAB55173.1| U2AF small subunit, U2AF-23 [Schizosaccharomyces pombe]
Length = 216
Score = 234 bits (596), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 107/190 (56%), Positives = 138/190 (72%), Gaps = 5/190 (2%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA HLASI+GTE+D+VNC FY+KIGACRHG+RCSR H KP+ S T+L NMY+ P
Sbjct: 1 MASHLASIYGTEQDKVNCSFYYKIGACRHGERCSRKHVKPNFSQTILCPNMYKNPIH--- 57
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
+P G+ R++ + F+ FYED+F E SKYGE+E L +CDN+ DH+VGNVYV+F+ EE
Sbjct: 58 --EPNGKKFTQRELAEQFDAFYEDMFCEFSKYGEVEQLVVCDNVGDHLVGNVYVRFKYEE 115
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A NA+ +LN R+Y+ RP+ + SPVTDFREA CRQ+E + C RGG CNFMH KK S +L
Sbjct: 116 SAQNAIDDLNSRWYSQRPVYAELSPVTDFREACCRQHETSECQRGGLCNFMHAKKPSPQL 175
Query: 181 RRRLFGRSRR 190
R L R+
Sbjct: 176 LRDLVLAQRK 185
>gi|348683758|gb|EGZ23573.1| hypothetical protein PHYSODRAFT_370516 [Phytophthora sojae]
Length = 203
Score = 234 bits (596), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 120/185 (64%), Positives = 147/185 (79%), Gaps = 4/185 (2%)
Query: 2 AEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRP--DMIT 59
AEHLA I GTE+DRVNCPFYFKIGACRHGDRCSRLH KP S T+L+S+MYQ P +I
Sbjct: 1 AEHLARIHGTEEDRVNCPFYFKIGACRHGDRCSRLHNKPVFSQTILVSHMYQNPIAQVIA 60
Query: 60 PGVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREE 119
DP +LD R + + FEDFYE++FEEL K+G++E LNICDNL DH+VGNVY ++ +E
Sbjct: 61 QNGDPA--SLDQRHVDEEFEDFYEEVFEELCKFGKLEELNICDNLGDHLVGNVYAKYEDE 118
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
EHAA A + L GRFYAGRP++ +FSPVTDFREA CRQ++E CNRGGYCNFMH+K + R
Sbjct: 119 EHAAAAQKALYGRFYAGRPLVCEFSPVTDFREARCRQFDEGTCNRGGYCNFMHIKTVPRS 178
Query: 180 LRRRL 184
++R L
Sbjct: 179 MQREL 183
>gi|225581058|gb|ACN94635.1| GA17536 [Drosophila miranda]
Length = 290
Score = 234 bits (596), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 107/182 (58%), Positives = 133/182 (73%), Gaps = 3/182 (1%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSR+H KP+ S T+LL N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNPQNSAK 60
Query: 61 GVDPQGQA--LDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFR 117
D + ++Q+H+++F+ED+F E KYGEIE +N+CDNL DH+VGNVY++FR
Sbjct: 61 SADGSHLVANVSDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR 120
Query: 118 EEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIS 177
E A A +LN R++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK IS
Sbjct: 121 NEADAEKAANDLNNRWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPIS 180
Query: 178 RE 179
RE
Sbjct: 181 RE 182
>gi|198476714|ref|XP_001357453.2| GA17536 [Drosophila pseudoobscura pseudoobscura]
gi|198137818|gb|EAL34522.2| GA17536 [Drosophila pseudoobscura pseudoobscura]
Length = 289
Score = 234 bits (596), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 107/182 (58%), Positives = 133/182 (73%), Gaps = 3/182 (1%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSR+H KP+ S T+LL N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNPQNSAK 60
Query: 61 GVDPQGQA--LDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFR 117
D + ++Q+H+++F+ED+F E KYGEIE +N+CDNL DH+VGNVY++FR
Sbjct: 61 SADGSHLVANVSDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR 120
Query: 118 EEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIS 177
E A A +LN R++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK IS
Sbjct: 121 NEADAEKAANDLNNRWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPIS 180
Query: 178 RE 179
RE
Sbjct: 181 RE 182
>gi|157114089|ref|XP_001657976.1| U2 snrnp auxiliary factor, small subunit [Aedes aegypti]
gi|108877446|gb|EAT41671.1| AAEL006713-PA [Aedes aegypti]
Length = 246
Score = 233 bits (595), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 108/182 (59%), Positives = 134/182 (73%), Gaps = 3/182 (1%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSR+H KP+ S T LL N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTCLLQNLYVNPQNSAK 60
Query: 61 GVDPQGQA--LDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFR 117
D + ++Q+H+++F+ED+F E KYGEIE +N+CDNL DH+VGNVY++FR
Sbjct: 61 SADGSHLVANVSDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR 120
Query: 118 EEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIS 177
EE A A ++LN R++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK IS
Sbjct: 121 REEDAERAAKDLNNRWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPIS 180
Query: 178 RE 179
RE
Sbjct: 181 RE 182
>gi|170063641|ref|XP_001867190.1| splicing factor U2af 38 kDa subunit [Culex quinquefasciatus]
gi|167881198|gb|EDS44581.1| splicing factor U2af 38 kDa subunit [Culex quinquefasciatus]
Length = 249
Score = 233 bits (595), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 108/182 (59%), Positives = 134/182 (73%), Gaps = 3/182 (1%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSR+H KP+ S T LL N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTCLLQNLYVNPQNSAK 60
Query: 61 GVDPQGQA--LDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFR 117
D + ++Q+H+++F+ED+F E KYGEIE +N+CDNL DH+VGNVY++FR
Sbjct: 61 SADGSHLVANVSDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR 120
Query: 118 EEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIS 177
EE A A ++LN R++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK IS
Sbjct: 121 REEDAERAAKDLNNRWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPIS 180
Query: 178 RE 179
RE
Sbjct: 181 RE 182
>gi|170035423|ref|XP_001845569.1| splicing factor U2af 38 kDa subunit [Culex quinquefasciatus]
gi|167877385|gb|EDS40768.1| splicing factor U2af 38 kDa subunit [Culex quinquefasciatus]
Length = 217
Score = 233 bits (594), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 108/182 (59%), Positives = 134/182 (73%), Gaps = 3/182 (1%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSR+H KP+ S T LL N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTCLLQNLYVNPQNSAK 60
Query: 61 GVDPQGQA--LDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFR 117
D + ++Q+H+++F+ED+F E KYGEIE +N+CDNL DH+VGNVY++FR
Sbjct: 61 SADGSHLVANVSDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR 120
Query: 118 EEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIS 177
EE A A ++LN R++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK IS
Sbjct: 121 REEDAERAAKDLNNRWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPIS 180
Query: 178 RE 179
RE
Sbjct: 181 RE 182
>gi|194766557|ref|XP_001965391.1| GF24893 [Drosophila ananassae]
gi|190618001|gb|EDV33525.1| GF24893 [Drosophila ananassae]
Length = 267
Score = 233 bits (594), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 107/182 (58%), Positives = 133/182 (73%), Gaps = 3/182 (1%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSR+H KP+ S T+LL N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNPQNSAK 60
Query: 61 GVDPQGQA--LDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFR 117
D + ++Q+H+++F+ED+F E KYGEIE +N+CDNL DH+VGNVY++FR
Sbjct: 61 SADGSHLVANVSDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR 120
Query: 118 EEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIS 177
E A A +LN R++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK IS
Sbjct: 121 NEADAEKAANDLNNRWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPIS 180
Query: 178 RE 179
RE
Sbjct: 181 RE 182
>gi|195035315|ref|XP_001989123.1| GH10217 [Drosophila grimshawi]
gi|193905123|gb|EDW03990.1| GH10217 [Drosophila grimshawi]
Length = 273
Score = 233 bits (594), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 107/182 (58%), Positives = 133/182 (73%), Gaps = 3/182 (1%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSR+H KP+ S T+LL N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNPQNSAK 60
Query: 61 GVDPQGQA--LDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFR 117
D + ++Q+H+++F+ED+F E KYGEIE +N+CDNL DH+VGNVY++FR
Sbjct: 61 SADGSHLVANVSDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR 120
Query: 118 EEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIS 177
E A A +LN R++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK IS
Sbjct: 121 NEADAEKAANDLNNRWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPIS 180
Query: 178 RE 179
RE
Sbjct: 181 RE 182
>gi|219126548|ref|XP_002183517.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405273|gb|EEC45217.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 251
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 119/238 (50%), Positives = 160/238 (67%), Gaps = 13/238 (5%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA+HLA I GTE+D+VNCPFYFKIGACRH DRCSRLH KP+ S TLL+ ++Y+ P
Sbjct: 1 MAQHLARIHGTEEDKVNCPFYFKIGACRHSDRCSRLHHKPAFSQTLLVQHLYRHPTRQAE 60
Query: 61 GVDPQG--QALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFRE 118
G +DPR+ Q+ F F+EDL+ E SK+G IE +++ DNL DHM+G+VYV+F +
Sbjct: 61 LRAAHGGDAHVDPRQAQEDFFAFFEDLYVEFSKFGRIEGMHVVDNLGDHMIGHVYVKFAD 120
Query: 119 EEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISR 178
EE A++AL+ +NGR+Y GRP+I++FSPVTDFREA CR Y+E+ C R GYCNF+H K + R
Sbjct: 121 EEQASDALQVMNGRYYDGRPMIIEFSPVTDFREARCRDYDEDQCARQGYCNFLHSKPVPR 180
Query: 179 ELRRRL--------FGRSRRRRSRSRSRSRSPHKYRGGYEERSHGGGRGSGRRDDDRD 228
L + L RRR +++ + H+ R E+RS+ R GR D RD
Sbjct: 181 ALLQSLEDDCEADRIAEKERRRRDRKTQKKRKHRDRSHSEDRSY---RKHGRSDRHRD 235
>gi|195114476|ref|XP_002001793.1| GI15018 [Drosophila mojavensis]
gi|193912368|gb|EDW11235.1| GI15018 [Drosophila mojavensis]
Length = 274
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 107/182 (58%), Positives = 133/182 (73%), Gaps = 3/182 (1%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSR+H KP+ S T+LL N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNPQNSAK 60
Query: 61 GVDPQGQA--LDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFR 117
D + ++Q+H+++F+ED+F E KYGEIE +N+CDNL DH+VGNVY++FR
Sbjct: 61 SADGSHLVANVSDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR 120
Query: 118 EEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIS 177
E A A +LN R++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK IS
Sbjct: 121 NEADAEKAANDLNNRWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPIS 180
Query: 178 RE 179
RE
Sbjct: 181 RE 182
>gi|355703446|gb|EHH29937.1| U2 auxiliary factor 26 [Macaca mulatta]
Length = 220
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 105/186 (56%), Positives = 139/186 (74%), Gaps = 1/186 (0%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
M E+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLH KP+ S T++L N+Y+ P
Sbjct: 1 MGEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIVLLNLYRNPQNTAQ 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREE 119
D + ++Q+H++ F+E++F EL KYGEIE +N+CD+L DH+VGNVYV+FR E
Sbjct: 61 TADGSHCHVSDVEVQEHYDSFFEEVFTELQEKYGEIEEMNMCDDLGDHLVGNVYVKFRRE 120
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
E A A+ LN R++ G+ + + SPVTDFRE+ CRQYE C RGG+CNFMHL+ IS+
Sbjct: 121 EDAERAVAELNNRWFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISQN 180
Query: 180 LRRRLF 185
LRR+++
Sbjct: 181 LRRQVY 186
>gi|195434328|ref|XP_002065155.1| GK14823 [Drosophila willistoni]
gi|194161240|gb|EDW76141.1| GK14823 [Drosophila willistoni]
Length = 287
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 107/182 (58%), Positives = 133/182 (73%), Gaps = 3/182 (1%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSR+H KP+ S T+LL N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNPQNSAK 60
Query: 61 GVDPQGQA--LDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFR 117
D + ++Q+H+++F+ED+F E KYGEIE +N+CDNL DH+VGNVY++FR
Sbjct: 61 SADGSHLVANVSDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR 120
Query: 118 EEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIS 177
E A A +LN R++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK IS
Sbjct: 121 NEADAEKAANDLNNRWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPIS 180
Query: 178 RE 179
RE
Sbjct: 181 RE 182
>gi|195386376|ref|XP_002051880.1| GJ17240 [Drosophila virilis]
gi|194148337|gb|EDW64035.1| GJ17240 [Drosophila virilis]
Length = 267
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 107/182 (58%), Positives = 133/182 (73%), Gaps = 3/182 (1%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSR+H KP+ S T+LL N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNPQNSAK 60
Query: 61 GVDPQGQA--LDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFR 117
D + ++Q+H+++F+ED+F E KYGEIE +N+CDNL DH+VGNVY++FR
Sbjct: 61 SADGSHLVANVSDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFR 120
Query: 118 EEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIS 177
E A A +LN R++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK IS
Sbjct: 121 NEADAEKAANDLNNRWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPIS 180
Query: 178 RE 179
RE
Sbjct: 181 RE 182
>gi|301791706|ref|XP_002930821.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like [Ailuropoda
melanoleuca]
Length = 290
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 105/177 (59%), Positives = 135/177 (76%), Gaps = 1/177 (0%)
Query: 10 GTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQAL 69
GTEK+RVNC FYFKIGACRHGDRCSRLH KP+ S T+L+ N+Y+ P D A+
Sbjct: 60 GTEKERVNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRNPQNSAQTADGSHCAV 119
Query: 70 DPRKIQDHFEDFYEDLFEEL-SKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRN 128
++Q+H+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR EE A A+ +
Sbjct: 120 SDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVID 179
Query: 129 LNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLF 185
LN R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISRELRR L+
Sbjct: 180 LNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 236
>gi|449303843|gb|EMC99850.1| hypothetical protein BAUCODRAFT_352847 [Baudoinia compniacensis
UAMH 10762]
Length = 210
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 113/208 (54%), Positives = 147/208 (70%), Gaps = 11/208 (5%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA +LASIFGTE+D+VNC FY+KIGACRHGDRCSR H KPS S T+LL N+YQ P
Sbjct: 1 MANYLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQ-----NP 55
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
D + +++D ++Q+HF+ FYED++ E++KYGE+E L +CDN DH++GNVY +F+ EE
Sbjct: 56 AYDTRARSMDASQLQNHFDAFYEDIWCEMNKYGELEELVVCDNNNDHLIGNVYARFKYEE 115
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A LN R+YAGRPI + SPVTDFREA CR C RGG+CNF+H K+ S E+
Sbjct: 116 SAQAASEALNSRWYAGRPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSEEM 175
Query: 181 RRRL------FGRSRRRRSRSRSRSRSP 202
R L + R+R R ++S SRS SP
Sbjct: 176 DRSLELATKKWLRARGRDAKSMSRSPSP 203
>gi|422294712|gb|EKU22012.1| splicing factor U2AF 35 kDa subunit, partial [Nannochloropsis
gaditana CCMP526]
Length = 313
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 109/191 (57%), Positives = 138/191 (72%), Gaps = 8/191 (4%)
Query: 2 AEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPG 61
AEHLA I GTE+D+VNCPFYFKIGACRHG+RCSR H KP S TLLL +MY+ P
Sbjct: 67 AEHLARIHGTEEDKVNCPFYFKIGACRHGERCSRKHNKPPFSQTLLLKHMYKNPASALFT 126
Query: 62 VDPQGQALDPRKIQDH--------FEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVY 113
+G+ P+ D FEDF+E+++EEL+K+GE+E +++CDNL +HM+GNVY
Sbjct: 127 APARGERAAPQGANDATNQAGLDDFEDFFEEVYEELAKFGEVEGMHVCDNLGEHMIGNVY 186
Query: 114 VQFREEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL 173
++ +EE A A + LNGRFYAGR + V+FSPVTDFREA CRQY+E C G YCNF+H+
Sbjct: 187 AKYADEEEADEARQALNGRFYAGRVLEVEFSPVTDFREARCRQYDEGQCTYGPYCNFLHV 246
Query: 174 KKISRELRRRL 184
K ISR LRR L
Sbjct: 247 KTISRALRRDL 257
>gi|313227857|emb|CBY23006.1| unnamed protein product [Oikopleura dioica]
Length = 240
Score = 231 bits (588), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 104/192 (54%), Positives = 141/192 (73%), Gaps = 5/192 (2%)
Query: 2 AEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPG 61
AE+LASIFGTEKD+VNC FYFKIGAC +GDRCSRLH KP+ S T+LL N+Y+ P +
Sbjct: 7 AEYLASIFGTEKDKVNCSFYFKIGACHYGDRCSRLHNKPTFSQTMLLQNLYRSPIL---- 62
Query: 62 VDPQGQALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREEE 120
D GQ + +Q H+++FYE++F E+ KYGEIE +N+C+NL DH+VGNVY++F EE
Sbjct: 63 DDDSGQQITETMLQQHYDEFYEEVFFEIEDKYGEIEEMNVCENLGDHLVGNVYIKFYREE 122
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A +N R++ +PI+ + SPVT+FREA CR YE C RGG+CNFMHLK IS++L
Sbjct: 123 DCEKAAEGVNDRWFGMQPIVGELSPVTNFREACCRDYEMGECTRGGFCNFMHLKPISKDL 182
Query: 181 RRRLFGRSRRRR 192
R++L+ + + R
Sbjct: 183 RKKLYAKKDKHR 194
>gi|169778681|ref|XP_001823805.1| splicing factor U2AF subunit [Aspergillus oryzae RIB40]
gi|238499237|ref|XP_002380853.1| U2 auxiliary factor small subunit, putative [Aspergillus flavus
NRRL3357]
gi|83772544|dbj|BAE62672.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220692606|gb|EED48952.1| U2 auxiliary factor small subunit, putative [Aspergillus flavus
NRRL3357]
gi|391870811|gb|EIT79981.1| U2 snRNP splicing factor, small subunit [Aspergillus oryzae 3.042]
Length = 209
Score = 231 bits (588), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 117/215 (54%), Positives = 146/215 (67%), Gaps = 12/215 (5%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA +LASIFGTE+D+VNC FY+KIGACRHGDRCSR H KPS S T+L+ NMYQ P
Sbjct: 1 MANYLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILMPNMYQ-----NP 55
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
DP+ + ++P ++Q+HF+ FYED++ E+ KYGEIE L +CDN DH++GNVY +F+ EE
Sbjct: 56 AYDPKNK-MNPSQLQNHFDAFYEDVWCEMCKYGEIEELVVCDNNNDHLIGNVYARFKYEE 114
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A LN R+YA RPI + SPVTDFREA CR C RGG+CNF+H K S EL
Sbjct: 115 DAQKACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKDPSNEL 174
Query: 181 RRRL------FGRSRRRRSRSRSRSRSPHKYRGGY 209
R L + + R R +RS SRS SP R Y
Sbjct: 175 DRELRLSTKKWLKERGRDARSVSRSPSPEPTRRRY 209
>gi|2130488|pir||JC6068 U2 auxiliary factor small chain - fission yeast
(Schizosaccharomyces pombe)
Length = 200
Score = 230 bits (587), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 107/191 (56%), Positives = 139/191 (72%), Gaps = 6/191 (3%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA HLASI+GTE+D+VNC FY+KIGACRHG+RCSR H KP+ S T+L NMY+ P
Sbjct: 1 MASHLASIYGTEQDKVNCSFYYKIGACRHGERCSRKHVKPNFSQTILCPNMYKNPIH--- 57
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
+P G+ R++ + F+ FYED+F E SKYGE+E L +CDN+ DH+VGNVYV+F+ EE
Sbjct: 58 --EPNGKKFTQRELAEQFDAFYEDMFCEFSKYGEVEQLVVCDNVGDHLVGNVYVRFKYEE 115
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A NA+ +LN R+Y+ RP+ + SPVTDFREA CRQ+E + C RGG CNFMH KK S +
Sbjct: 116 SAQNAIDDLNSRWYSQRPVYAELSPVTDFREACCRQHETSECQRGGLCNFMHAKKPSPQS 175
Query: 181 RRRLFGRSRRR 191
R FG S ++
Sbjct: 176 FTR-FGTSTKK 185
>gi|389741909|gb|EIM83097.1| splicing factor U2AF subunit [Stereum hirsutum FP-91666 SS1]
Length = 230
Score = 230 bits (586), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 122/250 (48%), Positives = 156/250 (62%), Gaps = 28/250 (11%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA HLA+IFGTE+DRVNC FY+KIGACRHGDRCSR H KP S T+LL N+Y P
Sbjct: 1 MASHLANIFGTEQDRVNCSFYYKIGACRHGDRCSRKHIKPPFSQTILLPNVYH-----NP 55
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
DP + L P+++QD F+ YEDL+ ELSK+G + L++CDN+ DH++GNVY ++ E
Sbjct: 56 AHDPVCK-LTPKELQDGFDAVYEDLYCELSKFGHLLELHVCDNVGDHLIGNVYARYEWET 114
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A+ NLN R+YAGRP+ + SPVTDFREA CRQ E CNRGG+CNFMHL+ S+EL
Sbjct: 115 EAQAAVDNLNDRWYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHLRLASKEL 174
Query: 181 RRRLFGRSRRRRSRSRSRSRSPHKYRGGYEERSHGGGRGSGRRDDDRDHRLHGRGRRPRS 240
L R + R +P + GG GG +R+ G R RS
Sbjct: 175 VSSL------RHGQRLERKINPPQNAGG------AGGWEPSKRE----------GGRGRS 212
Query: 241 RSPGRRGGRS 250
SP R+ G +
Sbjct: 213 ASPSRKAGST 222
>gi|160358766|sp|Q8WU68.2|U2AF4_HUMAN RecName: Full=Splicing factor U2AF 26 kDa subunit; AltName: Full=U2
auxiliary factor 26; AltName: Full=U2 small nuclear RNA
auxiliary factor 1-like protein 4; AltName:
Full=U2(RNU2) small nuclear RNA auxiliary factor 1-like
protein 3; Short=U2 small nuclear RNA auxiliary factor
1-like protein 3; Short=U2AF1-like protein 3
Length = 220
Score = 230 bits (586), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 104/186 (55%), Positives = 138/186 (74%), Gaps = 1/186 (0%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIG CRHGDRCSRLH KP+ S T++L N+Y+ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGVCRHGDRCSRLHNKPTFSQTIVLLNLYRNPQNTAQ 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREE 119
D + ++Q+H++ F+E++F EL KYGEIE +N+CDNL DH+VGNVYV+FR E
Sbjct: 61 TADGSHCHVSDVEVQEHYDSFFEEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRRE 120
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
E A+ L+ R++ G+ + + SPVTDFRE+ CRQYE C RGG+CNFMHL+ IS+
Sbjct: 121 EDGERAVAELSNRWFNGQAVHGELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISQN 180
Query: 180 LRRRLF 185
L+R+L+
Sbjct: 181 LQRQLY 186
>gi|324504738|gb|ADY42042.1| Splicing factor U2AF 35 kDa subunit [Ascaris suum]
Length = 255
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 106/189 (56%), Positives = 141/189 (74%), Gaps = 4/189 (2%)
Query: 2 AEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPG 61
AE+LASI+GTEKD+VNC FYFKIGACRHGD+CSR H +P+ SPT+LL N Y P +
Sbjct: 18 AEYLASIYGTEKDKVNCSFYFKIGACRHGDKCSRTHHRPTFSPTILLQNFYHNPVVDVRQ 77
Query: 62 VDPQGQA--LDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFRE 118
D + DP + Q +F++FYE++F EL KYGEI+ +N+C+N+ +HM+GNVYV+F
Sbjct: 78 ADAFDKVGKKDPEE-QKYFDEFYEEVFTELERKYGEIDEMNVCENIGEHMIGNVYVKFVR 136
Query: 119 EEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISR 178
EE A A+++L R++ G+PI + SPVTDFREA CRQ+E C++GG+CNFMHLK IS
Sbjct: 137 EEDAEKAVKDLQNRWFNGQPIYAELSPVTDFREARCRQHEVTTCSKGGFCNFMHLKAISP 196
Query: 179 ELRRRLFGR 187
EL RL+GR
Sbjct: 197 ELGDRLYGR 205
>gi|67904750|ref|XP_682631.1| hypothetical protein AN9362.2 [Aspergillus nidulans FGSC A4]
gi|40747273|gb|EAA66429.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4]
gi|259488204|tpe|CBF87476.1| TPA: U2 auxiliary factor small subunit, putative (AFU_orthologue;
AFUA_3G02380) [Aspergillus nidulans FGSC A4]
Length = 209
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 116/215 (53%), Positives = 146/215 (67%), Gaps = 12/215 (5%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA +LASIFGTE+D+VNC FY+KIGACRHGDRCSR H KPS S T+L+ NMYQ P
Sbjct: 1 MANYLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILMPNMYQ-----NP 55
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
DP+ + ++P ++Q+HF+ FYED++ E+ KYGE+E L +CDN DH++GNVY +F+ EE
Sbjct: 56 AYDPKSK-MNPSQLQNHFDAFYEDVWCEMCKYGELEELVVCDNNNDHLIGNVYARFKYEE 114
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A LN R+YA RPI + SPVTDFREA CR C RGG+CNF+H K S EL
Sbjct: 115 DAQAACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKDPSSEL 174
Query: 181 RRRL------FGRSRRRRSRSRSRSRSPHKYRGGY 209
R L + + R R +RS SRS SP R Y
Sbjct: 175 DRELRLSTKKWLKERGRDARSVSRSPSPEPTRRRY 209
>gi|403223158|dbj|BAM41289.1| U2 snRNP auxiliary factor [Theileria orientalis strain Shintoku]
Length = 242
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 135/289 (46%), Positives = 175/289 (60%), Gaps = 51/289 (17%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDM--- 57
MAEHLA I GTE+DRVNCPF++KIGACRHGD+CSR H KPS + TL++ +MYQ P +
Sbjct: 1 MAEHLARIIGTEEDRVNCPFFWKIGACRHGDQCSRTHYKPSAAQTLVIRHMYQNPPVAIA 60
Query: 58 ITPGVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFR 117
I G + LD K DHFE+F+E++F EL KYGEIE + +CDN+ DH++GNVY+++
Sbjct: 61 IAEGQMISDELLD--KAADHFEEFFEEVFLELMKYGEIEDMVVCDNIGDHIIGNVYIKYT 118
Query: 118 EEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIS 177
+E A A+ +L+GR+Y GRPI +++PVTDFREA CRQ+ E C RGGYCNFMH+K +
Sbjct: 119 DESAACRAVTSLSGRYYGGRPIQCEYTPVTDFREARCRQFVEGQCRRGGYCNFMHIKHVP 178
Query: 178 RELRRRLFGRSRRRRSRSRSRSRSPHKYRGGYEERSHGGGRGSGRRDDDRDHRLHGRGRR 237
R LRR+L R + RS RGS R
Sbjct: 179 RSLRRKLMKRMYEEFPEYKRRS-----------------PRGSHRN-------------- 207
Query: 238 PRSRSPGRRGGRSRSPGARRRSPVRESSVERRAKIEQWNREKEQADSGN 286
RSRSP R P R++S ERR IEQWNRE+E +G+
Sbjct: 208 -RSRSPQR--------------PKRQTSEERRDMIEQWNREREAKTAGD 241
>gi|121712082|ref|XP_001273656.1| U2 auxiliary factor small subunit, putative [Aspergillus clavatus
NRRL 1]
gi|119401808|gb|EAW12230.1| U2 auxiliary factor small subunit, putative [Aspergillus clavatus
NRRL 1]
Length = 209
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 115/212 (54%), Positives = 145/212 (68%), Gaps = 12/212 (5%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA +LASIFGTE+D+VNC FY+KIGACRHGDRCSR H KPS S T+L+ NMYQ P
Sbjct: 1 MANYLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILMPNMYQ-----NP 55
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
DP+ + ++P ++Q+HF+ FYED++ E+ KYGE+E L +CDN DH++GNVY +F+ EE
Sbjct: 56 AYDPKSK-MNPSQLQNHFDAFYEDVWCEMCKYGELEELVVCDNNNDHLIGNVYARFKYEE 114
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A LN R+YA RPI + SPVTDFREA CR C RGG+CNF+H K S EL
Sbjct: 115 DAQAACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKDPSAEL 174
Query: 181 RRRL------FGRSRRRRSRSRSRSRSPHKYR 206
R L + + R R +RS SRS SP R
Sbjct: 175 DRELRLSTKKWLKERGRDARSVSRSPSPEPTR 206
>gi|390601914|gb|EIN11307.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 238
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 115/222 (51%), Positives = 146/222 (65%), Gaps = 20/222 (9%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA HLA+IFGTE+DRVNC FY+KIGACRHGDRCSR H KPS S T+LL N+Y P
Sbjct: 1 MASHLANIFGTEQDRVNCSFYYKIGACRHGDRCSRKHIKPSFSQTILLPNVYH-----NP 55
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
DP Q L +++Q+ F+ YEDL+ ELSK+G + L++CDN+ DH++GNVY ++ E
Sbjct: 56 AHDPVCQ-LTEQQLQEGFDAVYEDLYCELSKFGHLLELHVCDNVGDHLIGNVYARYEWET 114
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A+ NLN R+YAGRP+ + SPVTDFREA CRQ E CNRGG+CNFMHL+ S+EL
Sbjct: 115 EAQAAVDNLNNRWYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHLRLASKEL 174
Query: 181 RRRL--------------FGRSRRRRSRSRSRSRSPHKYRGG 208
+ L G++ S+ RS SP RGG
Sbjct: 175 VKSLKHGQRLERRLNPATAGQATEGWVPSKRRSASPPSRRGG 216
>gi|303323541|ref|XP_003071762.1| splicing factor U2AF 23 kDa subunit, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|240111464|gb|EER29617.1| splicing factor U2AF 23 kDa subunit, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|320035093|gb|EFW17035.1| splicing factor U2AF 35 kDa subunit [Coccidioides posadasii str.
Silveira]
Length = 209
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 114/208 (54%), Positives = 144/208 (69%), Gaps = 12/208 (5%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA +LASIFGTE+D+VNC FY+KIGACRHGDRCSR H KPS S T+LL NMYQ P
Sbjct: 1 MANYLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNMYQ-----NP 55
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
DP+ + ++P ++Q+HF+ FYED + E+ KYGE+E + +CDN DH++GNVY +F+ E+
Sbjct: 56 AFDPKNK-MNPSQLQNHFDAFYEDFWCEMCKYGELEEVVVCDNNNDHLIGNVYARFKYED 114
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A NA LN R+YA RPI + SPVTDFREA CR C RGG+CNF+H K+ S EL
Sbjct: 115 SAQNACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSAEL 174
Query: 181 RRRL------FGRSRRRRSRSRSRSRSP 202
R L + + R R RS SRS SP
Sbjct: 175 ERDLELSTKKWLKLRGRDERSVSRSPSP 202
>gi|320590311|gb|EFX02754.1| u2 auxiliary factor small [Grosmannia clavigera kw1407]
Length = 208
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 116/212 (54%), Positives = 143/212 (67%), Gaps = 13/212 (6%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA LASIFGTE+D+VNC FY+KIGACRHGDRCSR H KPS S T+L+ N+YQ P ++
Sbjct: 1 MANFLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILMPNLYQNPANVSN 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
G ++ ++Q+HF+ FYED++ EL KYGE+E L +CDN DH+VGNVY +F+ EE
Sbjct: 61 G-------MNASQLQNHFDAFYEDIWCELCKYGELEELVVCDNNNDHLVGNVYARFKYEE 113
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
AA+A LNGR+YA RPI + SPVTDFREA CR C RGGYCNF+H K S EL
Sbjct: 114 SAASACDALNGRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGYCNFIHRKNPSEEL 173
Query: 181 RRRL------FGRSRRRRSRSRSRSRSPHKYR 206
L + + R R RS SRS SP R
Sbjct: 174 DNELQLATKKWLKLRGRDERSVSRSPSPEPTR 205
>gi|189209401|ref|XP_001941033.1| splicing factor U2af 38 kDa subunit [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187977126|gb|EDU43752.1| splicing factor U2af 38 kDa subunit [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 214
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 115/214 (53%), Positives = 147/214 (68%), Gaps = 12/214 (5%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA +LASIFGTE+D+VNC FY+KIGACRHGDRCSR H KPS S T+LL N+YQ P
Sbjct: 1 MANYLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQ-----NP 55
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
DP+ + ++ +++Q HF+ FYED++ EL +YG +E L +CDN DH++GNVYV+F+ EE
Sbjct: 56 AYDPKNK-MNAQQMQMHFDAFYEDIWCELCQYGLVEELVVCDNNNDHLIGNVYVRFKYEE 114
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A LN R+YAGRPI + SPVTDFREA CR C RGG+CNF+H K+ S EL
Sbjct: 115 DAQKACDALNSRWYAGRPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSAEL 174
Query: 181 RRRL------FGRSRRRRSRSRSRSRSPHKYRGG 208
R L + + R R +RS SRS +P GG
Sbjct: 175 DRELDMCTRKWLKERGRDARSMSRSPTPQPAAGG 208
>gi|336371539|gb|EGN99878.1| hypothetical protein SERLA73DRAFT_180138 [Serpula lacrymans var.
lacrymans S7.3]
gi|336384299|gb|EGO25447.1| hypothetical protein SERLADRAFT_465605 [Serpula lacrymans var.
lacrymans S7.9]
Length = 230
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 122/250 (48%), Positives = 155/250 (62%), Gaps = 28/250 (11%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA HLA+IFGTE+DRVNC FY+KIGACRHGDRCSR H +P S T+LL N+Y P
Sbjct: 1 MASHLANIFGTEQDRVNCSFYYKIGACRHGDRCSRKHIRPPFSQTILLPNVYH-----NP 55
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
DP + L +++Q+ F+ YEDL+ EL+K+G + L++CDN+ DH++GNVY ++ E
Sbjct: 56 AHDPVCK-LTEQELQEGFDAVYEDLYCELAKFGHLLELHVCDNVGDHLIGNVYARYEWET 114
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A+ NLN R+YAGRP+ + SPVTDFREA CRQ E CNRGG+CNFMHL+ S+EL
Sbjct: 115 EAQAAVDNLNDRWYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHLRLASKEL 174
Query: 181 RRRLFGRSRRRRSRSRSRSRSPHKYRGGYEERSHGGGRGSGRRDDDRDHRLHGRGRRPRS 240
L R R S++ S GG+E GGRG RS
Sbjct: 175 VSSLRAGQRLERRLHPSKNESG---GGGWEPTKREGGRG-------------------RS 212
Query: 241 RSPGRRGGRS 250
SP RRGG S
Sbjct: 213 ASPSRRGGHS 222
>gi|330940524|ref|XP_003305953.1| hypothetical protein PTT_18947 [Pyrenophora teres f. teres 0-1]
gi|311316782|gb|EFQ85946.1| hypothetical protein PTT_18947 [Pyrenophora teres f. teres 0-1]
Length = 214
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 115/214 (53%), Positives = 147/214 (68%), Gaps = 12/214 (5%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA +LASIFGTE+D+VNC FY+KIGACRHGDRCSR H KPS S T+LL N+YQ P
Sbjct: 1 MANYLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQ-----NP 55
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
DP+ + ++ +++Q HF+ FYED++ EL +YG +E L +CDN DH++GNVYV+F+ EE
Sbjct: 56 AYDPKNK-MNAQQMQMHFDAFYEDIWCELCQYGLVEELVVCDNNNDHLIGNVYVRFKYEE 114
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A LN R+YAGRPI + SPVTDFREA CR C RGG+CNF+H K+ S EL
Sbjct: 115 DAQKACDALNSRWYAGRPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSAEL 174
Query: 181 RRRL------FGRSRRRRSRSRSRSRSPHKYRGG 208
R L + + R R +RS SRS +P GG
Sbjct: 175 DRELDMCTRKWLKERGRDARSMSRSPTPQPAAGG 208
>gi|145228481|ref|XP_001388549.1| splicing factor U2AF subunit [Aspergillus niger CBS 513.88]
gi|134054638|emb|CAK43483.1| unnamed protein product [Aspergillus niger]
gi|350637745|gb|EHA26101.1| hypothetical protein ASPNIDRAFT_55496 [Aspergillus niger ATCC 1015]
Length = 209
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 116/215 (53%), Positives = 146/215 (67%), Gaps = 12/215 (5%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA +LASIFGTE+D+VNC FY+KIGACRHGDRCSR H KPS S T+L+ NMYQ P
Sbjct: 1 MANYLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILMPNMYQ-----NP 55
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
DP+ + ++P ++Q+HF+ FYED++ E+ KYGE+E L +CDN DH++GNVY +F+ EE
Sbjct: 56 AYDPKSK-MNPSQLQNHFDAFYEDVWCEMCKYGELEELVVCDNNNDHLIGNVYARFKYEE 114
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A LN R+YA RPI + SPVTDFREA CR C RGG+CNF+H K S EL
Sbjct: 115 DAQAACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKDPSNEL 174
Query: 181 RRRL------FGRSRRRRSRSRSRSRSPHKYRGGY 209
R L + + R R +RS SRS SP R Y
Sbjct: 175 DRDLRLSTKKWLKERGRDARSVSRSPSPEPTRRRY 209
>gi|115401000|ref|XP_001216088.1| splicing factor U2AF 23 kDa subunit [Aspergillus terreus NIH2624]
gi|114190029|gb|EAU31729.1| splicing factor U2AF 23 kDa subunit [Aspergillus terreus NIH2624]
Length = 209
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 116/215 (53%), Positives = 146/215 (67%), Gaps = 12/215 (5%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA +LASIFGTE+D+VNC FY+KIGACRHGDRCSR H KPS S T+L+ NMYQ P
Sbjct: 1 MANYLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILMPNMYQ-----NP 55
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
DP+ + ++P ++Q+HF+ FYED++ E+ KYGE+E L +CDN DH++GNVY +F+ EE
Sbjct: 56 AYDPKSK-MNPSQLQNHFDAFYEDVWCEMCKYGELEELVVCDNNNDHLIGNVYARFKYEE 114
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A LN R+YA RPI + SPVTDFREA CR C RGG+CNF+H K S EL
Sbjct: 115 DAQAACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKDPSPEL 174
Query: 181 RRRL------FGRSRRRRSRSRSRSRSPHKYRGGY 209
R L + + R R +RS SRS SP R Y
Sbjct: 175 DRELRLSTKKWLKERGRDARSVSRSPSPEPTRRRY 209
>gi|296415596|ref|XP_002837472.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633344|emb|CAZ81663.1| unnamed protein product [Tuber melanosporum]
Length = 212
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 113/209 (54%), Positives = 145/209 (69%), Gaps = 12/209 (5%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA +LASIFGTE+D+VNC FY+KIGACRHGDRCSR H KPS S T+LL N+YQ P
Sbjct: 1 MANYLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQ-----NP 55
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
DP+ + ++ ++Q+HF+ FYED F E+ KYGE+E + +CDN DH++GNVY +F+ EE
Sbjct: 56 AFDPKNK-MNTSQLQNHFDAFYEDFFCEMCKYGEVEEVVVCDNNNDHLIGNVYARFKYEE 114
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A LN R+YA RPI + SPVTDFREA CR C RGG+CNF+H K+ S++L
Sbjct: 115 DAQTACDALNARWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSKDL 174
Query: 181 RRRL------FGRSRRRRSRSRSRSRSPH 203
R L + R+R R RS SRS SP+
Sbjct: 175 ERELELGMKKWLRARGRDRRSVSRSVSPN 203
>gi|170595997|ref|XP_001902599.1| U2 small nuclear RNA auxiliary factor small subunit [Brugia malayi]
gi|158589634|gb|EDP28552.1| U2 small nuclear RNA auxiliary factor small subunit, putative
[Brugia malayi]
Length = 248
Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 106/190 (55%), Positives = 139/190 (73%), Gaps = 6/190 (3%)
Query: 2 AEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDM---I 58
AE+LASI+GTEKD+VNC FYFKIGACRHGD+CSR H +P+ SPT+LL N Y P +
Sbjct: 20 AEYLASIYGTEKDKVNCSFYFKIGACRHGDKCSRTHHRPTFSPTVLLQNFYHNPIVDVRQ 79
Query: 59 TPGVDPQGQALDPRKIQDHFEDFYEDLFEELSK-YGEIESLNICDNLADHMVGNVYVQFR 117
D G+ D Q +F++FYE++F EL K YGEI+ +N+C+N+ +HM+GNVYV+F
Sbjct: 80 ADAFDKVGKKNDEE--QAYFDEFYEEVFTELEKKYGEIDEMNVCENIGEHMIGNVYVKFL 137
Query: 118 EEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIS 177
EE A A+++L R++ G+PI + SPVTDFRE+ CRQ+E C +GG+CNFMHLK IS
Sbjct: 138 REEDAEKAVKDLENRWFNGQPIYAELSPVTDFRESRCRQHEVTTCYKGGFCNFMHLKAIS 197
Query: 178 RELRRRLFGR 187
EL RLFGR
Sbjct: 198 PELGERLFGR 207
>gi|402592968|gb|EJW86895.1| U2 snRNP splicing factor small subunit [Wuchereria bancrofti]
Length = 248
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 106/190 (55%), Positives = 139/190 (73%), Gaps = 6/190 (3%)
Query: 2 AEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDM---I 58
AE+LASI+GTEKD+VNC FYFKIGACRHGD+CSR H +P+ SPT+LL N Y P +
Sbjct: 20 AEYLASIYGTEKDKVNCSFYFKIGACRHGDKCSRTHHRPTFSPTVLLQNFYHNPIVDVRQ 79
Query: 59 TPGVDPQGQALDPRKIQDHFEDFYEDLFEELSK-YGEIESLNICDNLADHMVGNVYVQFR 117
D G+ D Q +F++FYE++F EL K YGEI+ +N+C+N+ +HM+GNVYV+F
Sbjct: 80 ADAFDKVGKKNDEE--QAYFDEFYEEVFTELEKKYGEIDEMNVCENIGEHMIGNVYVKFL 137
Query: 118 EEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIS 177
EE A A+++L R++ G+PI + SPVTDFRE+ CRQ+E C +GG+CNFMHLK IS
Sbjct: 138 REEDAEKAVKDLENRWFNGQPIYAELSPVTDFRESRCRQHEVTTCYKGGFCNFMHLKAIS 197
Query: 178 RELRRRLFGR 187
EL RLFGR
Sbjct: 198 PELGERLFGR 207
>gi|171695120|ref|XP_001912484.1| hypothetical protein [Podospora anserina S mat+]
gi|170947802|emb|CAP59965.1| unnamed protein product [Podospora anserina S mat+]
Length = 208
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 111/202 (54%), Positives = 143/202 (70%), Gaps = 7/202 (3%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA LASIFGTE+D+VNC FY+KIGACRHGDRCSR H KPS S T+L+ N+YQ P
Sbjct: 1 MANFLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILMPNLYQ-----NP 55
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
DP+ + ++P ++Q+HF+ FYED++ E+ KYGEIE L +CDN DH++GNVY +F+ E+
Sbjct: 56 AFDPKNR-MNPSQLQNHFDAFYEDIWCEMCKYGEIEELVVCDNNNDHLIGNVYARFKYED 114
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A +LN R+YA RPI + SPVTDFREA CR C RGG+CNF+H K S EL
Sbjct: 115 SAQKACDDLNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSPEL 174
Query: 181 RRRLFGRSRRRRSRSRSRSRSP 202
R L S ++ ++R RSRSP
Sbjct: 175 EREL-ELSTKKWLKTRPRSRSP 195
>gi|212526104|ref|XP_002143209.1| U2 auxiliary factor small subunit, putative [Talaromyces marneffei
ATCC 18224]
gi|242780019|ref|XP_002479507.1| U2 auxiliary factor small subunit, putative [Talaromyces stipitatus
ATCC 10500]
gi|210072607|gb|EEA26694.1| U2 auxiliary factor small subunit, putative [Talaromyces marneffei
ATCC 18224]
gi|218719654|gb|EED19073.1| U2 auxiliary factor small subunit, putative [Talaromyces stipitatus
ATCC 10500]
Length = 209
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 114/215 (53%), Positives = 147/215 (68%), Gaps = 12/215 (5%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA +LASIFGTE+D+VNC FY+KIGACRHGDRCSR H KPS S T+LL N+YQ P
Sbjct: 1 MANYLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQ-----NP 55
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
DP+ + ++P +IQ+HF+ FYED++ E+ KYGEIE + +CDN DH++GNVY +F+ E+
Sbjct: 56 AYDPKNK-MNPSQIQNHFDAFYEDIWCEMCKYGEIEEIVVCDNNNDHLIGNVYARFKYED 114
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A LN R+YA RP+ + SPVTDFREA CR C RGG+CNF+H K+ + EL
Sbjct: 115 SAQAACDALNSRWYAARPVYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPTPEL 174
Query: 181 RRRL------FGRSRRRRSRSRSRSRSPHKYRGGY 209
+R L + + R R RS SRS SP R Y
Sbjct: 175 QRELDLATKKWLKERGRDERSVSRSPSPEPTRRRY 209
>gi|70986128|ref|XP_748561.1| U2 auxiliary factor small subunit [Aspergillus fumigatus Af293]
gi|66846190|gb|EAL86523.1| U2 auxiliary factor small subunit, putative [Aspergillus fumigatus
Af293]
gi|159128305|gb|EDP53420.1| U2 auxiliary factor small subunit, putative [Aspergillus fumigatus
A1163]
Length = 209
Score = 228 bits (580), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 116/215 (53%), Positives = 145/215 (67%), Gaps = 12/215 (5%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA +LASIFGTE+D+VNC FY+KIGACRHGDRCSR H KPS S T+L+ NMYQ P
Sbjct: 1 MANYLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILMPNMYQ-----NP 55
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
DP+ + ++P ++Q+HF+ FYED++ E+ KYGE+E L +CDN DH++GNVY +F+ EE
Sbjct: 56 AYDPKNK-MNPSQLQNHFDAFYEDVWCEMCKYGELEELVVCDNNNDHLIGNVYARFKYEE 114
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A LN R+YA RPI + SPVTDFREA CR C RGG+CNF+H K S EL
Sbjct: 115 DAQAACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKDPSPEL 174
Query: 181 RRRL------FGRSRRRRSRSRSRSRSPHKYRGGY 209
R L + + R R RS SRS SP R Y
Sbjct: 175 DRELRLSTKKWLKERGRDPRSASRSPSPEPTRRRY 209
>gi|119474039|ref|XP_001258895.1| U2 auxiliary factor small subunit, putative [Neosartorya fischeri
NRRL 181]
gi|119407048|gb|EAW16998.1| U2 auxiliary factor small subunit, putative [Neosartorya fischeri
NRRL 181]
Length = 209
Score = 228 bits (580), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 115/212 (54%), Positives = 144/212 (67%), Gaps = 12/212 (5%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA +LASIFGTE+D+VNC FY+KIGACRHGDRCSR H KPS S T+L+ NMYQ P
Sbjct: 1 MANYLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILMPNMYQ-----NP 55
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
DP+ + ++P ++Q+HF+ FYED++ E+ KYGE+E L +CDN DH++GNVY +F+ EE
Sbjct: 56 AYDPKNK-MNPSQLQNHFDAFYEDVWCEMCKYGELEELVVCDNNNDHLIGNVYARFKYEE 114
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A LN R+YA RPI + SPVTDFREA CR C RGG+CNF+H K S EL
Sbjct: 115 DAQAACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKDPSPEL 174
Query: 181 RRRL------FGRSRRRRSRSRSRSRSPHKYR 206
R L + + R R RS SRS SP R
Sbjct: 175 DRELRLSTKKWLKERGRDPRSASRSPSPEPTR 206
>gi|402224397|gb|EJU04460.1| RNA-binding domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 272
Score = 227 bits (579), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 119/247 (48%), Positives = 152/247 (61%), Gaps = 27/247 (10%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA HLA+IFGTE+DRVNC FY+KIGACRHGDRCSR H KP S T+LL+N+Y P
Sbjct: 1 MASHLANIFGTEQDRVNCSFYYKIGACRHGDRCSRKHIKPPFSQTILLNNVYH-----NP 55
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
DP + L +++QD+F+ YEDL+ ELSK+G + L++CDN+ DH++GNVY ++ E
Sbjct: 56 AHDPNCK-LSSQELQDNFDQLYEDLYIELSKFGHLLELHVCDNIGDHLIGNVYARYEWEA 114
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A+ LN R+YAGRP+ + SPVTDFREA CRQ E CNRGGYCNFMHL+ S++L
Sbjct: 115 EAQAAVDALNDRWYAGRPLYAELSPVTDFREACCRQNENGECNRGGYCNFMHLRIASKDL 174
Query: 181 RRRLFGRSRRRRSRSRSRSRSPHKYRGGYEERSHGGGRGSGRRDDDRDHRLHGRGRRPRS 240
+ L R R G E + G G G + +R RS
Sbjct: 175 VKSLEVSQRLERRMQ------------GKENSNAGAGAG---------WQPPSASKRARS 213
Query: 241 RSPGRRG 247
RSP R G
Sbjct: 214 RSPARGG 220
>gi|281352323|gb|EFB27907.1| hypothetical protein PANDA_021410 [Ailuropoda melanoleuca]
Length = 178
Score = 227 bits (579), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 104/178 (58%), Positives = 135/178 (75%), Gaps = 1/178 (0%)
Query: 15 RVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKI 74
RVNC FYFKIGACRHGDRCSRLH KP+ S T+ L N+Y+ P + D A+ ++
Sbjct: 1 RVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSADGLRCAVSDVEM 60
Query: 75 QDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRF 133
Q+H+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR EE A A+ +LN R+
Sbjct: 61 QEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRW 120
Query: 134 YAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRRR 191
+ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISRELRR L+GR R++
Sbjct: 121 FNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELYGRRRKK 178
>gi|346324452|gb|EGX94049.1| splicing factor U2AF 35 kDa subunit [Cordyceps militaris CM01]
Length = 211
Score = 227 bits (579), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 115/212 (54%), Positives = 144/212 (67%), Gaps = 10/212 (4%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA LASIFGTE+D+VNC FYFKIGACRHGDRCSR H KPS S T+L+ N+YQ P
Sbjct: 1 MANFLASIFGTEQDKVNCSFYFKIGACRHGDRCSRKHVKPSYSQTILMPNLYQNPAYDQK 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
V+ ++P ++Q+HF+ FYED++ EL KYGE+E L +CDN DH++GNVY +F+ E+
Sbjct: 61 NVN----RMNPSQLQNHFDAFYEDIWCELCKYGELEELVVCDNNNDHLIGNVYARFKYED 116
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
+ A LNGR+YAGRPI + SPVTDFREA CR C RGG+CNF+H K S EL
Sbjct: 117 ASQKACDELNGRWYAGRPIYCELSPVTDFREACCRLNSGEGCMRGGFCNFIHRKNPSDEL 176
Query: 181 RRRL------FGRSRRRRSRSRSRSRSPHKYR 206
R L + RSR R +S SRS +P R
Sbjct: 177 DRDLTLSTKKWLRSRGRDEKSVSRSPTPEPTR 208
>gi|395333024|gb|EJF65402.1| RNA-binding domain-containing protein [Dichomitus squalens LYAD-421
SS1]
Length = 230
Score = 227 bits (579), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 122/249 (48%), Positives = 155/249 (62%), Gaps = 29/249 (11%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA HLA+IFGTE+DRVNC FY+KIGACRHGDRCSR H KP+ S T+LL N+Y P
Sbjct: 1 MASHLANIFGTEQDRVNCSFYYKIGACRHGDRCSRKHIKPAFSQTILLPNVYH-----NP 55
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
DP + +++Q+ F+ YEDL+ EL+K+G + L++CDN+ DH++GNVY ++ E
Sbjct: 56 AHDPVCTKTE-KELQEGFDAVYEDLYCELAKFGHLLELHVCDNVGDHLIGNVYARYEWET 114
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A+ NLN R+YAGRP+ + SPVTDFREA CRQ E CNRGG+CNFMHL+ S EL
Sbjct: 115 EAQAAVDNLNDRWYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHLRLASPEL 174
Query: 181 RRRLFGRSRRRRSRSRSRSRSPHKYRGGYEERSHGGGRGSGRRDDDRDHRLHGRGRRPRS 240
R L R + R P G GGG G+R+ G R RS
Sbjct: 175 VRSL------RHGQRLERRLHPPTTTG-------GGGWEPGKRE----------GGRGRS 211
Query: 241 RSPGRRGGR 249
SP +RGGR
Sbjct: 212 ASPSKRGGR 220
>gi|325303588|tpg|DAA34232.1| TPA_inf: U2 snRNP splicing factor small subunit [Amblyomma
variegatum]
Length = 192
Score = 227 bits (579), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 109/192 (56%), Positives = 135/192 (70%), Gaps = 15/192 (7%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSR+H KP+ S T+LL N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYHNPQNSAQ 60
Query: 61 GVDPQGQA-LDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFRE 118
D A + ++Q+HF++F+ED+F EL KYGEIE +N+CDNL DH+VGNVYV+FR
Sbjct: 61 TADGSHLANMTEEEMQEHFDNFFEDVFVELEDKYGEIEEMNVCDNLGDHLVGNVYVKFRR 120
Query: 119 EEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENV-------------CNRG 165
EE A A+ +LN R++AG PI + SPVTDFREA CRQYE + C R
Sbjct: 121 EEDAEKAVADLNNRWFAGHPIYSELSPVTDFREACCRQYEMGLKAKTWRSTTATEECTRS 180
Query: 166 GYCNFMHLKKIS 177
G+CNFMH + IS
Sbjct: 181 GFCNFMHPQPIS 192
>gi|322707016|gb|EFY98595.1| splicing factor U2AF 23 kDa subunit, putative [Metarhizium
anisopliae ARSEF 23]
Length = 208
Score = 227 bits (579), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 115/208 (55%), Positives = 142/208 (68%), Gaps = 12/208 (5%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA LASIFGTE D+VNC FYFKIGACRHGDRCSR H KPS S T+L+ N+YQ P
Sbjct: 1 MANFLASIFGTELDKVNCSFYFKIGACRHGDRCSRKHVKPSYSQTILMPNLYQ-----NP 55
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
DP+ + ++P ++Q+HF+ FYED++ EL KYGE+E L +CDN DH++GNVY +F+ EE
Sbjct: 56 AYDPKNR-MNPSQLQNHFDAFYEDIWCELCKYGELEELVVCDNNNDHLIGNVYARFKYEE 114
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A LN R+YAGRPI + SPVTDFREA CR C RGG+CNF+H K S EL
Sbjct: 115 SAQKACDELNSRWYAGRPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSEEL 174
Query: 181 RRRL------FGRSRRRRSRSRSRSRSP 202
R L + + R R RS SRS +P
Sbjct: 175 DRDLTLSTKKWLKLRGRDERSMSRSPTP 202
>gi|425770129|gb|EKV08603.1| U2 auxiliary factor small subunit, putative [Penicillium digitatum
Pd1]
gi|425771678|gb|EKV10115.1| U2 auxiliary factor small subunit, putative [Penicillium digitatum
PHI26]
Length = 209
Score = 227 bits (578), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 117/215 (54%), Positives = 145/215 (67%), Gaps = 12/215 (5%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA +LASIFGTE+D+VNC FY+KIGACRHGDRCSR H KPS S T+L+ NMYQ P
Sbjct: 1 MANYLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILMPNMYQ-----NP 55
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
DP+ + ++P ++Q+HF+ FYED++ E+ KYGE+E L ICDN DH++GNVY +F+ EE
Sbjct: 56 AYDPKNK-MNPSQMQNHFDAFYEDVWCEMCKYGELEELVICDNNNDHLIGNVYGRFKYEE 114
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A LN R+YA RPI + SPVTDFREA CR C RGG+CNF+H K S EL
Sbjct: 115 DAQAACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKDPSSEL 174
Query: 181 RRRL------FGRSRRRRSRSRSRSRSPHKYRGGY 209
R L + + R R RS SRS SP R Y
Sbjct: 175 DRELRLSTKKWLKERGRDPRSASRSPSPEPARRRY 209
>gi|302679412|ref|XP_003029388.1| hypothetical protein SCHCODRAFT_78248 [Schizophyllum commune H4-8]
gi|300103078|gb|EFI94485.1| hypothetical protein SCHCODRAFT_78248 [Schizophyllum commune H4-8]
Length = 228
Score = 226 bits (577), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 123/249 (49%), Positives = 158/249 (63%), Gaps = 31/249 (12%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA HLA+IFGTE+DRVNC FY+KIGACRHGDRCSR H +P S T+LL N+Y P
Sbjct: 1 MASHLANIFGTEQDRVNCSFYYKIGACRHGDRCSRKHIRPPFSQTILLPNVYH-----NP 55
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
DP + L+ +++Q+ F+ YEDL+ EL+K+G + L++CDN+ DH++GNVY ++ E
Sbjct: 56 AHDPVCK-LNEKELQEGFDAVYEDLYCELAKFGHLLELHVCDNVGDHLIGNVYARYEWET 114
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A+ NLN R+YAGRP+ + SPVTDFREA CRQ E CNRGG+CNFMHL+ S+EL
Sbjct: 115 EAQAAVDNLNDRWYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHLRLASKEL 174
Query: 181 RRRLFGRSRRRRSRSRSRSRSPHKYRGGYEERSHGGGRGSGRRDDDRDHRLHGRGRRPRS 240
L R + R +P K +GG GGG +RD R RS
Sbjct: 175 VESL------RVGQRLERRLNPQKTQGG------GGGWEPRKRD------------RERS 210
Query: 241 RSPGRRGGR 249
SP RRGGR
Sbjct: 211 ASP-RRGGR 218
>gi|312066026|ref|XP_003136074.1| hypothetical protein LOAG_00486 [Loa loa]
Length = 346
Score = 226 bits (577), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 105/190 (55%), Positives = 139/190 (73%), Gaps = 6/190 (3%)
Query: 2 AEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDM---I 58
AE+LASI+GTEKD+VNC FYFKIGACRHGD+CSR H +P+ SPT+LL N Y P +
Sbjct: 118 AEYLASIYGTEKDKVNCSFYFKIGACRHGDKCSRTHHRPTFSPTVLLQNFYHNPIVDVRQ 177
Query: 59 TPGVDPQGQALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFR 117
D G+ D Q +F++FYE++F EL KYGEI+ +N+C+N+ +HM+GNVYV+F
Sbjct: 178 ADAFDKVGKKNDEE--QAYFDEFYEEVFTELERKYGEIDEMNVCENIGEHMIGNVYVKFM 235
Query: 118 EEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIS 177
EE A A+++L R++ G+PI + SPVTDFRE+ CRQ+E C +GG+CNFMHLK IS
Sbjct: 236 REEDAEKAVKDLENRWFNGQPIYAELSPVTDFRESRCRQHEVTTCYKGGFCNFMHLKAIS 295
Query: 178 RELRRRLFGR 187
EL +LFGR
Sbjct: 296 PELGEKLFGR 305
>gi|169613392|ref|XP_001800113.1| hypothetical protein SNOG_09827 [Phaeosphaeria nodorum SN15]
gi|111061972|gb|EAT83092.1| hypothetical protein SNOG_09827 [Phaeosphaeria nodorum SN15]
Length = 210
Score = 226 bits (577), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 113/208 (54%), Positives = 145/208 (69%), Gaps = 12/208 (5%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA +LASIFGTE+D+VNC FY+KIGACRHGDRCSR H KPS S T+LL N+YQ P
Sbjct: 1 MANYLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQ-----NP 55
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
DP+ + ++P+++Q HF+ FYED++ EL +YG +E L +CDN DH++GNVYV+F+ EE
Sbjct: 56 AYDPKNK-MNPQQMQMHFDAFYEDIWCELCQYGLVEELVVCDNNNDHLIGNVYVRFKYEE 114
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
+ A LN R+YAGRPI + SPVTDFREA CR C RGG+CNF+H K+ S EL
Sbjct: 115 DSQKACDALNSRWYAGRPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSAEL 174
Query: 181 RRRL------FGRSRRRRSRSRSRSRSP 202
R L + + R R RS SRS +P
Sbjct: 175 DRELDMCTRKWLKERGRDERSMSRSPTP 202
>gi|392593590|gb|EIW82915.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 231
Score = 226 bits (577), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 123/250 (49%), Positives = 156/250 (62%), Gaps = 27/250 (10%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA HLA+IFGTE+DRVNC FY+KIGACRHGDRCSR H +P S T+LL N+Y P
Sbjct: 1 MASHLANIFGTEQDRVNCSFYYKIGACRHGDRCSRKHIRPPFSQTILLPNVYH-----NP 55
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
DP + L +++Q+ F+ YEDL+ EL+K+G + L++CDN+ DH++GNVY +F E
Sbjct: 56 AHDPVCK-LTEKELQEGFDAVYEDLYCELAKFGHLLELHVCDNVGDHLIGNVYARFEWET 114
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A+ NLN R+YAGRP+ + SPVTDFREA CRQ E CNRGG+CNFMHL+ S +L
Sbjct: 115 EAQAAVDNLNDRWYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHLRLASADL 174
Query: 181 RRRLFGRSRRRRSRSRSRSRSPHKYRGGYEERSHGGGRGSGRRDDDRDHRLHGRGRRPRS 240
R L + + R +P K GG GG RR+ G R RS
Sbjct: 175 VRSL------KHGQRLQRKINPPKTAGG-----GGGWEPPSRRE----------GGRGRS 213
Query: 241 RSPGRRGGRS 250
SP RRGG S
Sbjct: 214 ASPHRRGGNS 223
>gi|46124965|ref|XP_387036.1| hypothetical protein FG06860.1 [Gibberella zeae PH-1]
gi|408388308|gb|EKJ67994.1| hypothetical protein FPSE_11805 [Fusarium pseudograminearum CS3096]
Length = 209
Score = 226 bits (577), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 116/215 (53%), Positives = 143/215 (66%), Gaps = 12/215 (5%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA LASIFGTE D+VNC FYFKIGACRHGDRCSR H KPS S T+L+ N+YQ P
Sbjct: 1 MANFLASIFGTELDKVNCSFYFKIGACRHGDRCSRKHVKPSYSQTILMPNLYQ-----NP 55
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
DP+ + ++P ++Q+HF+ FYED++ EL KYGE+E L +CDN DH++GNVY +F+ EE
Sbjct: 56 AYDPKNR-MNPSQLQNHFDAFYEDIWCELCKYGELEELVVCDNNNDHLIGNVYARFKYEE 114
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A LN R+YA RPI + SPVTDFREA CR C RGG+CNF+H K S EL
Sbjct: 115 SAQKACDELNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSEEL 174
Query: 181 RRRL------FGRSRRRRSRSRSRSRSPHKYRGGY 209
R L + + R R RS SRS +P R Y
Sbjct: 175 DRDLTLSTKKWLKQRGRDERSASRSPTPEPTRRRY 209
>gi|255941442|ref|XP_002561490.1| Pc16g11900 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211586113|emb|CAP93860.1| Pc16g11900 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 209
Score = 226 bits (577), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 117/215 (54%), Positives = 145/215 (67%), Gaps = 12/215 (5%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA +LASIFGTE+D+VNC FY+KIGACRHGDRCSR H KPS S T+L+ NMYQ P
Sbjct: 1 MANYLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILMPNMYQ-----NP 55
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
DP+ + ++P ++Q+HF+ FYED++ E+ KYGE+E L ICDN DH++GNVY +F+ EE
Sbjct: 56 AYDPKNK-MNPSQMQNHFDAFYEDVWCEMCKYGELEELVICDNNNDHLIGNVYGRFKYEE 114
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A LN R+YA RPI + SPVTDFREA CR C RGG+CNF+H K S EL
Sbjct: 115 DAQAACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKDPSPEL 174
Query: 181 RRRL------FGRSRRRRSRSRSRSRSPHKYRGGY 209
R L + + R R RS SRS SP R Y
Sbjct: 175 DRELRLSTKKWLKERGRDPRSASRSPSPEPTRRRY 209
>gi|119188829|ref|XP_001245021.1| conserved hypothetical protein [Coccidioides immitis RS]
gi|392867930|gb|EAS33646.2| splicing factor U2AF 35 kDa subunit [Coccidioides immitis RS]
Length = 209
Score = 226 bits (577), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 113/208 (54%), Positives = 143/208 (68%), Gaps = 12/208 (5%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA +LASIFGTE+D+VNC FY+KIGACRHGDRCSR H KPS S T+LL NMYQ P
Sbjct: 1 MANYLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNMYQ-----NP 55
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
DP+ + ++P ++Q+HF+ FYED + E+ KYGE+E + +CDN DH++GNVY +F+ E+
Sbjct: 56 AFDPKNK-MNPSQLQNHFDAFYEDFWCEMCKYGELEEVVVCDNNNDHLIGNVYARFKYED 114
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A LN R+YA RPI + SPVTDFREA CR C RGG+CNF+H K+ S EL
Sbjct: 115 SAQKACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSAEL 174
Query: 181 RRRL------FGRSRRRRSRSRSRSRSP 202
R L + + R R RS SRS SP
Sbjct: 175 ERDLELSTKKWLKLRGRDERSVSRSPSP 202
>gi|449546411|gb|EMD37380.1| hypothetical protein CERSUDRAFT_114053 [Ceriporiopsis subvermispora
B]
Length = 230
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 120/247 (48%), Positives = 154/247 (62%), Gaps = 29/247 (11%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA HLA+IFGTE+DRVNC FY+KIGACRHGDRCSR H KP+ S T+LL N+Y P
Sbjct: 1 MASHLANIFGTEQDRVNCSFYYKIGACRHGDRCSRKHIKPAFSQTILLPNVYH-----NP 55
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
DP + L +++Q+ F+ YEDL+ EL+K+G + L++CDN+ DH++GNVY ++ E
Sbjct: 56 AHDPVCK-LTEKELQEGFDAVYEDLYCELAKFGHLLELHVCDNVGDHLIGNVYARYEWET 114
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A+ NLN R+YAGRP+ + SPVTDFREA CRQ E CNRGG+CNFMHL+ S+EL
Sbjct: 115 EAQAAVDNLNDRWYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHLRLASKEL 174
Query: 181 RRRLFGRSRRRRSRSRSRSRSPHKYRGGYEERSHGGGRGSGRRDDDRDHRLHGRGRRPRS 240
L R + R P K G GGG +R+ G R RS
Sbjct: 175 VSSL------RHGQRLERRLHPPKTEG-------GGGWEPTKRE----------GARGRS 211
Query: 241 RSPGRRG 247
SP +RG
Sbjct: 212 ASPAKRG 218
>gi|392570233|gb|EIW63406.1| splicing factor U2AF subunit [Trametes versicolor FP-101664 SS1]
Length = 230
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 119/250 (47%), Positives = 157/250 (62%), Gaps = 29/250 (11%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA HLA+IFGTE+DRVNC FY+KIGACRHGDRCSR H KP+ S T+LL N+Y P
Sbjct: 1 MASHLANIFGTEQDRVNCSFYYKIGACRHGDRCSRKHIKPAFSQTILLPNVYH-----NP 55
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
DP + +++Q+ F+ YEDL+ EL+K+G + L++CDN+ DH++GNVY ++ E
Sbjct: 56 AHDPVCTKTE-KELQEGFDAVYEDLYCELAKFGHLLELHVCDNVGDHLIGNVYARYEWET 114
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A+ NLN R+YAGRP+ + SPVTDFREA CRQ E CNRGG+CNFMHL+ + +L
Sbjct: 115 EAQAAVDNLNDRWYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHLRLPTPDL 174
Query: 181 RRRLFGRSRRRRSRSRSRSRSPHKYRGGYEERSHGGGRGSGRRDDDRDHRLHGRGRRPRS 240
R L R + R +P + G GGG +R+ G R RS
Sbjct: 175 ARSL------RHGQRLERRLNPTQTTG-------GGGWEPTKRE----------GARARS 211
Query: 241 RSPGRRGGRS 250
SP +RGGR+
Sbjct: 212 ASPAKRGGRN 221
>gi|343424964|emb|CBQ68501.1| related to splicing factor U2AF 35 kd subunit [Sporisorium
reilianum SRZ2]
Length = 282
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 108/216 (50%), Positives = 148/216 (68%), Gaps = 10/216 (4%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA HLASI+GTE+D+VNC FY+KIGACRHGDRCSR H +P S TLLLSN+Y+ P
Sbjct: 1 MASHLASIYGTEQDKVNCSFYYKIGACRHGDRCSRKHIRPPYSCTLLLSNVYRNPRH--- 57
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
Q + ++Q F+ FYED+F EL++YG++ +++CDN+ DH++GNVY ++R E
Sbjct: 58 --HEQDCTITDTELQAQFDTFYEDMFVELAQYGQLVEMHVCDNVGDHLIGNVYARYRYEA 115
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A+ LN R+Y G+P+ + SPVTDF+EA CRQ E N CNRGG+CNFMHL+ SR +
Sbjct: 116 DAQRAVDALNDRWYDGKPLFAELSPVTDFQEACCRQNETNECNRGGFCNFMHLRYASRPI 175
Query: 181 RR----RLFGRSRRRRSRSRSRSRSPHKYRGGYEER 212
R+ +L R+RR R ++ K R G++ER
Sbjct: 176 RKQLNHQLAVELRKRRDEGRDTAKGVKK-RLGWKER 210
>gi|400602483|gb|EJP70085.1| splicing factor U2AF 23 kDa subunit [Beauveria bassiana ARSEF 2860]
Length = 211
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 113/208 (54%), Positives = 142/208 (68%), Gaps = 10/208 (4%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA LASIFGTE+D+VNC FYFKIGACRHGDRCSR H KPS S T+L+ N+YQ P
Sbjct: 1 MANFLASIFGTEQDKVNCSFYFKIGACRHGDRCSRKHVKPSYSQTILMPNLYQNPAYDQK 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
+ ++P ++Q+HF+ FYED++ EL KYGE+E L +CDN DH++GNVY +F+ E+
Sbjct: 61 NTN----RMNPSQLQNHFDAFYEDIWCELCKYGELEELVVCDNNNDHLIGNVYARFKYED 116
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A LNGR+YAGRPI + SPVTDFREA CR C RGG+CNF+H K S EL
Sbjct: 117 AAQKACDELNGRWYAGRPIYCELSPVTDFREACCRLNSGEGCMRGGFCNFIHRKNPSDEL 176
Query: 181 RRRL------FGRSRRRRSRSRSRSRSP 202
R L + R+R R +S SRS +P
Sbjct: 177 DRDLTLSTKKWLRARGRDEKSVSRSPTP 204
>gi|345565480|gb|EGX48429.1| hypothetical protein AOL_s00080g58 [Arthrobotrys oligospora ATCC
24927]
Length = 210
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 112/208 (53%), Positives = 143/208 (68%), Gaps = 12/208 (5%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA +LASIFGTE+D+VNC FY+KIGACRHGDRCSR H KPS S T+LL NMYQ P
Sbjct: 1 MANYLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTVLLPNMYQ-----NP 55
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
DP+ + ++P ++Q HF+ FYED++ E+ KYGEIE L +CDN DH++GNVY +F+ EE
Sbjct: 56 AFDPKNK-MNPNQLQTHFDGFYEDIWCEMCKYGEIEELVVCDNNNDHLIGNVYARFKFEE 114
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A LN R+YA RPI + SPVTDFREA CR C RGG+CNF+H K+ ++E+
Sbjct: 115 DAQKACDELNQRWYAARPIYCELSPVTDFREACCRLNSGEGCQRGGFCNFIHRKEPTKEM 174
Query: 181 RRRL------FGRSRRRRSRSRSRSRSP 202
R L + R R + R +RS SP
Sbjct: 175 DRDLELSTKKWLRIRGKDEREATRSPSP 202
>gi|322701010|gb|EFY92761.1| splicing factor U2AF 23 kDa subunit, putative [Metarhizium acridum
CQMa 102]
Length = 208
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 114/208 (54%), Positives = 142/208 (68%), Gaps = 12/208 (5%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA LASIFGTE D+VNC FYFKIGACRHGDRCSR H KPS S T+L+ N+YQ P
Sbjct: 1 MANFLASIFGTELDKVNCSFYFKIGACRHGDRCSRKHVKPSYSQTILMPNLYQ-----NP 55
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
DP+ + ++P ++Q+HF+ FYED++ EL KYGE+E L +CDN DH++GNVY +F+ E+
Sbjct: 56 AYDPKNR-MNPSQLQNHFDAFYEDIWCELCKYGELEELVVCDNNNDHLIGNVYARFKYED 114
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A LN R+YAGRPI + SPVTDFREA CR C RGG+CNF+H K S EL
Sbjct: 115 SAQKACDELNSRWYAGRPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSEEL 174
Query: 181 RRRL------FGRSRRRRSRSRSRSRSP 202
R L + + R R RS SRS +P
Sbjct: 175 DRDLTLSTKKWLKLRGRDERSMSRSPTP 202
>gi|324521720|gb|ADY47915.1| Splicing factor U2AF 35 kDa subunit [Ascaris suum]
Length = 253
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 107/193 (55%), Positives = 140/193 (72%), Gaps = 12/193 (6%)
Query: 2 AEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPG 61
AE+LASI+GTEKD+VNC FYFKIGACRHGD+CSR H +P+ SPT+LL N Y P
Sbjct: 20 AEYLASIYGTEKDKVNCSFYFKIGACRHGDKCSRTHNRPTFSPTILLQNFYH-----NPV 74
Query: 62 VDP-QGQALDP-----RKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYV 114
VD Q A D + Q +F++FYE++F EL KYGEI+ +N+C+N+ +HM+GNVYV
Sbjct: 75 VDLRQADAFDKVGKKNEEEQAYFDEFYEEVFTELERKYGEIDEMNVCENIGEHMIGNVYV 134
Query: 115 QFREEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLK 174
+F EE A A+++L R++ G+PI V+ SPVTDFRE+ CRQ+E C +GG+CNFMHLK
Sbjct: 135 KFMREEDAEKAVKDLENRWFNGQPIYVELSPVTDFRESRCRQHEITTCCKGGFCNFMHLK 194
Query: 175 KISRELRRRLFGR 187
IS L +LFGR
Sbjct: 195 AISPALGEKLFGR 207
>gi|451850761|gb|EMD64062.1| hypothetical protein COCSADRAFT_199489 [Cochliobolus sativus
ND90Pr]
Length = 211
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 113/208 (54%), Positives = 145/208 (69%), Gaps = 12/208 (5%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA +LASIFGTE+D+VNC FY+KIGACRHGDRCSR H KPS S T+LL N+YQ P
Sbjct: 1 MANYLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQ-----NP 55
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
DP+ + ++ +++Q HF+ FYED++ EL +YG +E L +CDN DH++GNVYV+F+ EE
Sbjct: 56 AYDPKNK-MNAQQMQMHFDAFYEDIWCELCQYGLVEELVVCDNNNDHLIGNVYVRFKYEE 114
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A LN R+YAGRPI + SPVTDFREA CR C RGG+CNF+H K+ S EL
Sbjct: 115 DAQKACDALNSRWYAGRPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSAEL 174
Query: 181 RRRL------FGRSRRRRSRSRSRSRSP 202
R L + + R R +RS SRS +P
Sbjct: 175 DRELDMCTRKWLKERGRDARSMSRSPTP 202
>gi|428672035|gb|EKX72950.1| U2 snrnp auxiliary factor, small subunit, putative [Babesia equi]
Length = 243
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 135/288 (46%), Positives = 171/288 (59%), Gaps = 51/288 (17%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDM--- 57
MAEHLA I GTE+DRVNCPFY+KIGACRHGD+CSR H KPS S TL++ +MYQ P +
Sbjct: 1 MAEHLARIIGTEEDRVNCPFYWKIGACRHGDQCSRAHYKPSASQTLVIRHMYQNPPVAIA 60
Query: 58 ITPGVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFR 117
I G + LD K DHFE+F+E++F EL KYGEIE + +CDN+ DH++GNVYV++
Sbjct: 61 IAEGQMISDELLD--KAADHFEEFFEEVFLELMKYGEIEDMVVCDNIGDHIIGNVYVKYS 118
Query: 118 EEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIS 177
+E A+ A+ +L+GR+Y GRPI +++PVTDFREA CRQ+ + C RGGYCNFMH+K I
Sbjct: 119 DESAASRAVTSLSGRYYGGRPIQAEYTPVTDFREARCRQFVDGQCRRGGYCNFMHIKHIP 178
Query: 178 RELRRRLFGRSRRRRSRSRSRSRSPHKYRGGYEERSHGGGRGSGRRDDDRDHRLHGRGRR 237
R LRR+L R YEE + R
Sbjct: 179 RSLRRKLMKRM--------------------YEEYP------------------EYKKRS 200
Query: 238 PRSRSPGRRGGRSRSPGARRRSPVRESSVERRAKIEQWNREKEQADSG 285
PRS R G R P R++S ERR I QWNRE+E G
Sbjct: 201 PRSSYRNRSGSPHR--------PKRQTSEERRDMIAQWNREREDKAPG 240
>gi|388858152|emb|CCF48220.1| related to splicing factor U2AF 35 kd subunit [Ustilago hordei]
Length = 284
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 120/289 (41%), Positives = 169/289 (58%), Gaps = 12/289 (4%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA +LASI+GTE+D+VNC FY+KIGACRHGDRCSR H +P S TLLLSN+Y+ P P
Sbjct: 1 MASYLASIYGTEQDKVNCSFYYKIGACRHGDRCSRKHIRPPYSCTLLLSNVYRNPRHHEP 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
+ ++Q F+ FYED+F EL+KYGE+ +++CDN+ DH++GNVY +++ E
Sbjct: 61 DC-----TITDTELQQQFDAFYEDMFTELAKYGELVEMHVCDNVGDHLIGNVYARYKYET 115
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIS--- 177
A A+ LN R+Y G+P+ + SPVTDF+EA CRQ E N CNRGG+CNFMHL+ S
Sbjct: 116 DAQLAVDALNDRWYDGKPLFAELSPVTDFQEACCRQNETNECNRGGFCNFMHLRYASAPT 175
Query: 178 -RELRRRLFGRSRRRRSRSRSRSRSPHKYRGGYEERSHGGGRGSGRRDDDRDHRLHGRGR 236
+EL +L R+R+ RS + K G E + G + + + + +
Sbjct: 176 RKELNHQLAVELRKRKEEGRSTAAGVMKKLGWKERLALEQGEDLAKVEQEAESIEAEEAK 235
Query: 237 RPRSRSPGRRGGRSRSPGARRRSPV---RESSVERRAKIEQWNREKEQA 282
+ RS G G P A R P R E +++E ++QA
Sbjct: 236 KRDWRSGGSGGDWRSQPRAEEREPAEGQRNGDAESPSRVEGEQSARDQA 284
>gi|342890175|gb|EGU89039.1| hypothetical protein FOXB_00451 [Fusarium oxysporum Fo5176]
Length = 209
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 115/215 (53%), Positives = 143/215 (66%), Gaps = 12/215 (5%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA LASIFGTE D+VNC FYFKIGACRHGDRCSR H KPS S T+L+ N+YQ P
Sbjct: 1 MANFLASIFGTELDKVNCSFYFKIGACRHGDRCSRKHVKPSYSQTILMPNLYQ-----NP 55
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
DP+ + ++P ++Q+HF+ FYED++ EL KYGE+E L +CDN DH++GNVY +F+ EE
Sbjct: 56 AYDPKNR-MNPSQLQNHFDAFYEDIWCELCKYGELEELVVCDNNNDHLIGNVYARFKYEE 114
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A LN R+YA RPI + SPVTDFREA CR C RGG+CNF+H K S EL
Sbjct: 115 SAQKACDELNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSEEL 174
Query: 181 RRRL------FGRSRRRRSRSRSRSRSPHKYRGGY 209
R L + + R R +S SRS +P R Y
Sbjct: 175 DRDLTLSTKKWLKERGRDEKSASRSPTPEPTRRRY 209
>gi|403293028|ref|XP_003937526.1| PREDICTED: splicing factor U2AF 26 kDa subunit [Saimiri boliviensis
boliviensis]
Length = 268
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 110/219 (50%), Positives = 148/219 (67%), Gaps = 1/219 (0%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
+AE+LASIFGTEKD+VNC FY KIGACRHGDRCSRLH KP+ S T++L N+Y+ P
Sbjct: 49 LAEYLASIFGTEKDKVNCSFYLKIGACRHGDRCSRLHNKPTFSQTIVLLNLYRNPQNTAQ 108
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREE 119
D + ++Q H++ F+E++F EL KYGEIE +N+ DNL +H+VGN+YV+FR E
Sbjct: 109 NADGSHCHVSDVELQQHYDSFFEEVFTELQEKYGEIEEMNVYDNLRNHLVGNIYVKFRRE 168
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
E A A+ L+ R++ G+ + SPVTDF E+ C QYE C +GG+CNFMHL+ ISR
Sbjct: 169 EDAERAVAELHNRWFNGQGVHAKLSPVTDFWESCCHQYEMGECTQGGFCNFMHLRPISRN 228
Query: 180 LRRRLFGRSRRRRSRSRSRSRSPHKYRGGYEERSHGGGR 218
LR++L+GR R RS RS + + R + H GR
Sbjct: 229 LRQQLYGRGPRCRSPPRSHTGHRPRERNCWHSPDHRHGR 267
>gi|451995958|gb|EMD88425.1| hypothetical protein COCHEDRAFT_1205672 [Cochliobolus
heterostrophus C5]
Length = 211
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 113/208 (54%), Positives = 145/208 (69%), Gaps = 12/208 (5%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA +LASIFGTE+D+VNC FY+KIGACRHGDRCSR H KPS S T+LL N+YQ P
Sbjct: 1 MANYLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQ-----NP 55
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
DP+ + ++ +++Q HF+ FYED++ EL +YG +E L +CDN DH++GNVYV+F+ EE
Sbjct: 56 AYDPKNK-MNAQQMQMHFDAFYEDIWCELCQYGLVEELVVCDNNNDHLIGNVYVRFKYEE 114
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A LN R+YAGRPI + SPVTDFREA CR C RGG+CNF+H K+ S EL
Sbjct: 115 DAQKACDALNSRWYAGRPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSPEL 174
Query: 181 RRRL------FGRSRRRRSRSRSRSRSP 202
R L + + R R +RS SRS +P
Sbjct: 175 DRELDMCTRKWLKERGRDARSMSRSPTP 202
>gi|389624797|ref|XP_003710052.1| splicing factor U2AF 23 kDa subunit [Magnaporthe oryzae 70-15]
gi|351649581|gb|EHA57440.1| splicing factor U2AF 23 kDa subunit [Magnaporthe oryzae 70-15]
gi|440473536|gb|ELQ42326.1| splicing factor U2AF 23 kDa subunit [Magnaporthe oryzae Y34]
gi|440483649|gb|ELQ63999.1| splicing factor U2AF 23 kDa subunit [Magnaporthe oryzae P131]
Length = 209
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 114/212 (53%), Positives = 141/212 (66%), Gaps = 12/212 (5%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA LASIFGTE+D+VNC FYFKIGACRHGDRCSR H KP+ S T+L+ NMYQ P
Sbjct: 1 MANFLASIFGTEQDKVNCSFYFKIGACRHGDRCSRKHVKPTYSQTILMPNMYQ-----NP 55
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
DP+ ++ ++Q+HF+ FYEDL+ EL KYGE+E L +CDN DH++GNVY +F+ E+
Sbjct: 56 AYDPKNN-MNASQLQNHFDAFYEDLWCELCKYGELEELVVCDNNNDHLIGNVYARFKYED 114
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A LN R+YA RPI + SPVTDFREA CR C RGG+CNF+H K S EL
Sbjct: 115 SAQKACDELNSRWYAARPIYCELSPVTDFREACCRLNSGEGCTRGGFCNFIHRKNPSEEL 174
Query: 181 RRRL------FGRSRRRRSRSRSRSRSPHKYR 206
R L + + R R RS SRS +P R
Sbjct: 175 DRELVLATKKWLKMRGRDERSVSRSPTPEPSR 206
>gi|358377722|gb|EHK15405.1| hypothetical protein TRIVIDRAFT_74630 [Trichoderma virens Gv29-8]
Length = 209
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 114/212 (53%), Positives = 143/212 (67%), Gaps = 12/212 (5%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA LASIFGTE D+VNC FYFKIGACRHGDRCSR H KPS S T+L+ N+YQ P
Sbjct: 1 MANFLASIFGTELDKVNCSFYFKIGACRHGDRCSRKHVKPSYSQTILMPNLYQ-----NP 55
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
DP+ + ++P ++Q+HF+ FYED++ EL KYGE+E L +CDN DH++GNVY +F+ E+
Sbjct: 56 AYDPKNR-MNPSQLQNHFDAFYEDIWCELCKYGELEELVVCDNNNDHLIGNVYARFKYED 114
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A+ A LN R+YA RPI + SPVTDFREA CR C RGG+CNF+H K S EL
Sbjct: 115 SASAACEALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSDEL 174
Query: 181 RRRL------FGRSRRRRSRSRSRSRSPHKYR 206
R L + + R R RS SRS +P R
Sbjct: 175 DRELTLSTKKWLKMRGRDERSVSRSPTPEPTR 206
>gi|315051764|ref|XP_003175256.1| splicing factor U2AF subunit [Arthroderma gypseum CBS 118893]
gi|327296385|ref|XP_003232887.1| splicing factor U2AF subunit [Trichophyton rubrum CBS 118892]
gi|311340571|gb|EFQ99773.1| splicing factor U2AF subunit [Arthroderma gypseum CBS 118893]
gi|326465198|gb|EGD90651.1| splicing factor U2AF 35 kDa subunit [Trichophyton rubrum CBS
118892]
gi|326473197|gb|EGD97206.1| splicing factor U2AF 35 kDa subunit [Trichophyton tonsurans CBS
112818]
Length = 209
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 114/215 (53%), Positives = 145/215 (67%), Gaps = 12/215 (5%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA +LASIFGTE+D+VNC FY+KIGACRHGDRCSR H KPS S T+LL N+YQ P
Sbjct: 1 MANYLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQNPQY--- 57
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
DP+ + ++P ++Q+HF+ FYED + E+ KYGEIE + +C+N DH++GNVY +F+ E+
Sbjct: 58 --DPKNK-MNPSQLQNHFDAFYEDFWCEMCKYGEIEEVVVCENNNDHLIGNVYARFKYED 114
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A LN R+YA RPI + SPVTDFREA CR C RGG+CNF+H K+ S EL
Sbjct: 115 SAQKACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSEEL 174
Query: 181 RRRL------FGRSRRRRSRSRSRSRSPHKYRGGY 209
R L + R R R RS +RS SP R Y
Sbjct: 175 DRELELSTKKWLRLRGRDERSVTRSPSPEPTRKRY 209
>gi|409044918|gb|EKM54399.1| hypothetical protein PHACADRAFT_174897 [Phanerochaete carnosa
HHB-10118-sp]
Length = 226
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 114/217 (52%), Positives = 146/217 (67%), Gaps = 21/217 (9%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA HLA+IFGTE+DRVNC FY+KIGACRHGDRCSR H KP+ S T+LL N+Y P
Sbjct: 1 MASHLANIFGTEQDRVNCSFYYKIGACRHGDRCSRKHIKPAFSQTILLPNVYH-----NP 55
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
DP + L +++Q+ F+ YEDL+ EL+K+G + L++CDN+ DH++GNVY ++ E
Sbjct: 56 AHDPVCK-LTEKELQEGFDAVYEDLYCELAKFGHLLELHVCDNVGDHLIGNVYARYEWET 114
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A+ NLN R+YAGRP+ + SPVTDFREA CRQ E CNRGG+CNFMHL+ S EL
Sbjct: 115 EAQTAVDNLNDRWYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHLRLASPEL 174
Query: 181 RRRL-FGRSRRRR--------------SRSRSRSRSP 202
R L G+ RR S+SR+RS SP
Sbjct: 175 VRSLRHGQRLERRLHPQQSTGGGGWEPSKSRARSASP 211
>gi|340924092|gb|EGS18995.1| putative splicing factor [Chaetomium thermophilum var. thermophilum
DSM 1495]
Length = 209
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 110/205 (53%), Positives = 145/205 (70%), Gaps = 9/205 (4%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA LASIFGTE+D+VNC FY+KIGACRHGDRCSR H KPS S T+L+ N+YQ P
Sbjct: 1 MANFLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILMPNLYQ-----NP 55
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
DP+ + ++ +++Q+HF+ FYED++ E+ KYGE+E L +CDN DH++GNVY +F+ EE
Sbjct: 56 AHDPKCR-MNEQQLQNHFDAFYEDIWCEMCKYGELEELVVCDNNNDHLIGNVYARFKYEE 114
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
AA A +LN R+YA RP+ + SPVTDFREA CR C RGG+CNF+H K S EL
Sbjct: 115 DAAKACEDLNSRWYAARPVYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSPEL 174
Query: 181 RRRLFGRSR---RRRSRSRSRSRSP 202
R L ++ + + RSRS +RSP
Sbjct: 175 ERELQLATKKWLKMKPRSRSPTRSP 199
>gi|326913392|ref|XP_003203022.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like [Meleagris
gallopavo]
Length = 243
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 104/184 (56%), Positives = 135/184 (73%), Gaps = 1/184 (0%)
Query: 3 EHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGV 62
E + + FG RVNC FYFKIGACRHGDRCSRLH KP+ S T+ L N+Y+ P +
Sbjct: 9 EQVCNYFGFYTCRVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSA 68
Query: 63 DPQGQALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREEEH 121
D A+ ++Q+H+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR EE
Sbjct: 69 DGLRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREED 128
Query: 122 AANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELR 181
A A+ +LN R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISRELR
Sbjct: 129 AEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELR 188
Query: 182 RRLF 185
R L+
Sbjct: 189 RELY 192
>gi|390478246|ref|XP_002761504.2| PREDICTED: uncharacterized protein LOC100415206 [Callithrix
jacchus]
Length = 933
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 101/174 (58%), Positives = 132/174 (75%), Gaps = 1/174 (0%)
Query: 13 KDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPR 72
+D+VNC FYFKIGACRHGDRCSRLH KP+ S T+ L N+Y+ P + D A+
Sbjct: 706 EDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSADGLRCAVSDV 765
Query: 73 KIQDHFEDFYEDLFEEL-SKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNG 131
++Q+H+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR EE A A+ +LN
Sbjct: 766 EMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNN 825
Query: 132 RFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLF 185
R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISRELRR L+
Sbjct: 826 RWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 879
>gi|440635086|gb|ELR05005.1| splicing factor U2AF 35 kDa subunit [Geomyces destructans 20631-21]
Length = 209
Score = 224 bits (570), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 115/215 (53%), Positives = 142/215 (66%), Gaps = 12/215 (5%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA +LASIFGTE+D+VNC FY+KIGACRHGDRCSR H KPS S T+LL N+YQ P
Sbjct: 1 MANYLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTVLLPNLYQ-----NP 55
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
DP+ + LD +++Q HF+ FYED + E+ KYGE+E + ICDN DH++GNVY +F+ E+
Sbjct: 56 AYDPKAK-LDAKQLQMHFDAFYEDFWCEMCKYGELEEVVICDNNNDHLIGNVYARFKYED 114
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A LN R+YA RPI + SPVTDFREA CR C R G+CNF+H K S EL
Sbjct: 115 SAQKACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRAGFCNFIHRKNPSPEL 174
Query: 181 RRRL------FGRSRRRRSRSRSRSRSPHKYRGGY 209
R L + R R R RS +RS SP R Y
Sbjct: 175 ERELDMSTRKWLRERGRDERSVTRSPSPEPTRRRY 209
>gi|358391429|gb|EHK40833.1| hypothetical protein TRIATDRAFT_301601 [Trichoderma atroviride IMI
206040]
Length = 209
Score = 224 bits (570), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 114/212 (53%), Positives = 142/212 (66%), Gaps = 12/212 (5%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA LASIFGTE D+VNC FYFKIGACRHGDRCSR H KPS S T+L+ N+YQ P
Sbjct: 1 MANFLASIFGTELDKVNCSFYFKIGACRHGDRCSRKHVKPSYSQTILMPNLYQ-----NP 55
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
DP+ + ++ ++Q+HF+ FYED++ EL KYGE+E L +CDN DH++GNVY +F+ E+
Sbjct: 56 AYDPKNR-MNASQLQNHFDAFYEDIWCELCKYGELEELVVCDNNNDHLIGNVYARFKYED 114
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A LN R+YA RPI + SPVTDFREA CR C RGG+CNF+H K S EL
Sbjct: 115 SAQAAADTLNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSEEL 174
Query: 181 RRRL------FGRSRRRRSRSRSRSRSPHKYR 206
R L + +SR R RS SRS +P R
Sbjct: 175 DRELTLSTKKWLKSRGRDERSASRSPTPEPTR 206
>gi|444509612|gb|ELV09368.1| Splicing factor U2AF 35 kDa subunit [Tupaia chinensis]
Length = 252
Score = 224 bits (570), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 108/180 (60%), Positives = 136/180 (75%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLH +P+ S T++L +MY+ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNRPTFSQTIVLRHMYRNPQNPAQ 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
D AL + Q H+E+F++++F E+ +YGE+E +N+CDNL DH+VGNVYV+F EE
Sbjct: 61 SADGVRGALSEAETQQHYEEFFQEVFTEMEEYGEVEEMNVCDNLGDHLVGNVYVKFGREE 120
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A AL +N R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISREL
Sbjct: 121 DAEKALVAVNSRWFHGQPIHAELSPVTDFREACCRQYETGACARGGFCNFMHLKPISREL 180
>gi|167526258|ref|XP_001747463.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774298|gb|EDQ87930.1| predicted protein [Monosiga brevicollis MX1]
Length = 454
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 106/190 (55%), Positives = 135/190 (71%), Gaps = 16/190 (8%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAEHLASIFGTEKD+VNC FY+KIGACRHGDRCSRLH KP+ S T+L+ N+YQ P I
Sbjct: 188 MAEHLASIFGTEKDKVNCSFYYKIGACRHGDRCSRLHNKPTFSQTILMQNLYQNP--INT 245
Query: 61 GVDPQG---QALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQF 116
V P G +L ++Q+HF+ FY D+F EL KYG +E +N+CDNL DH+VGNVYV F
Sbjct: 246 PVMPDGRPGHSLSKGELQEHFDRFYADIFWELEEKYGAVEDMNVCDNLGDHLVGNVYVMF 305
Query: 117 REEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKI 176
+E A+ +LN R+Y VTDFREA CRQYE++ C RGG+CNFMHL+K+
Sbjct: 306 ENDEDGEKAVLDLNNRWYG----------VTDFREACCRQYEKSECTRGGFCNFMHLRKL 355
Query: 177 SRELRRRLFG 186
+++ L+G
Sbjct: 356 GDNMQKTLYG 365
>gi|300176329|emb|CBK23640.2| unnamed protein product [Blastocystis hominis]
Length = 343
Score = 223 bits (569), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 114/225 (50%), Positives = 149/225 (66%), Gaps = 18/225 (8%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA+HL ++GTE+DRVNCPFYFKIGACRHGDRC+R H +P+ S T+L+ +MY P
Sbjct: 1 MADHLVRVYGTEEDRVNCPFYFKIGACRHGDRCTRKHNRPTFSQTILIPHMYHNPKASGV 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSK-YGEIESLNICDNLADHMVGNVYVQFREE 119
DP + IQ F++FYE++++ELS+ YG IE L++CDNL DHM+GNVYV+F +E
Sbjct: 61 TGDPSQAQ---QLIQQQFDEFYEEVYQELSQSYGPIEELHVCDNLNDHMIGNVYVKFEDE 117
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
E A AL+ L R+YAGRP+ ++SPVTDFREA CRQ+EE C RGGYCNFMHL S+
Sbjct: 118 EDAEKALKGLTHRYYAGRPLAPEYSPVTDFREARCRQHEEGQCTRGGYCNFMHLMTPSQP 177
Query: 180 LRRRLFGRSRRRRSRSRSRSRSPHKYRGGYEERSHGGGRGSGRRD 224
+ R F + R +R +E G RG GRR+
Sbjct: 178 VFYRCFPKGRWGYTR--------------FERLHDKGPRGDGRRN 208
>gi|378729857|gb|EHY56316.1| hypothetical protein HMPREF1120_04400 [Exophiala dermatitidis
NIH/UT8656]
Length = 209
Score = 223 bits (569), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 113/215 (52%), Positives = 144/215 (66%), Gaps = 12/215 (5%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA +LASIFGTE+D+VNC FY+KIGACRHGDRCSR H KPS S T+LL N+YQ P
Sbjct: 1 MANYLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQ-----NP 55
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
DP+ + ++ ++Q+HF+ FYED + E+ KYGE+E + +CDN DH++GNVY +F+ E+
Sbjct: 56 AYDPKNK-MNASQLQNHFDAFYEDFWCEMCKYGELEEVVVCDNNNDHLIGNVYARFKYED 114
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A LN R+YA RPI + SPVTDFREA CR C RGG+CNF+H K+ S EL
Sbjct: 115 SAQKACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSPEL 174
Query: 181 RRRL------FGRSRRRRSRSRSRSRSPHKYRGGY 209
R L + + R R RS SRS SP R Y
Sbjct: 175 ERELELSTKKWLKMRGRDERSVSRSPSPEPTRKRY 209
>gi|340519983|gb|EGR50220.1| predicted protein [Trichoderma reesei QM6a]
Length = 209
Score = 223 bits (569), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 113/212 (53%), Positives = 143/212 (67%), Gaps = 12/212 (5%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA LASIFGTE D+VNC FYFKIGACRHGDRCSR H KPS S T+L+ N+YQ P
Sbjct: 1 MANFLASIFGTELDKVNCSFYFKIGACRHGDRCSRKHVKPSYSQTILMPNLYQ-----NP 55
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
DP+ + ++ ++Q+HF+ FYED++ EL KYGE+E L +CDN DH++GNVY +F+ E+
Sbjct: 56 AYDPKNR-MNASQLQNHFDAFYEDIWCELCKYGELEELVVCDNNNDHLIGNVYARFKYED 114
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A+ A LN R+YA RPI + SPVTDFREA CR C RGG+CNF+H K S EL
Sbjct: 115 SASAACEALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSEEL 174
Query: 181 RRRL------FGRSRRRRSRSRSRSRSPHKYR 206
R L + + R R RS+SRS +P R
Sbjct: 175 DRELTLSTKKWLKMRGRDERSQSRSPTPEPSR 206
>gi|310790801|gb|EFQ26334.1| hypothetical protein GLRG_01478 [Glomerella graminicola M1.001]
Length = 209
Score = 223 bits (568), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 114/215 (53%), Positives = 144/215 (66%), Gaps = 12/215 (5%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA LASIFGTE D+VNC FYFKIGACRHGDRCSR H KPS S T+L+ N+YQ P
Sbjct: 1 MANFLASIFGTELDKVNCSFYFKIGACRHGDRCSRKHVKPSYSQTILMPNLYQ-----NP 55
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
DP+ + ++P ++Q+HF+ FYED++ EL KYGE+E L +CDN DH++GNVY +F+ E+
Sbjct: 56 AYDPKNR-MNPSQLQNHFDAFYEDIWCELCKYGELEELVVCDNNNDHLIGNVYARFKYED 114
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A +LN R+YA RPI + SPVTDFREA CR C RGG+CNF+H K S +L
Sbjct: 115 SAQKACDDLNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSEDL 174
Query: 181 RRRL------FGRSRRRRSRSRSRSRSPHKYRGGY 209
R L + + R R RS SRS +P R Y
Sbjct: 175 DRDLTLSTKKWLKERGRDERSPSRSPTPEPTRRRY 209
>gi|380493273|emb|CCF34000.1| hypothetical protein CH063_06082 [Colletotrichum higginsianum]
Length = 209
Score = 223 bits (568), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 114/215 (53%), Positives = 144/215 (66%), Gaps = 12/215 (5%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA LASIFGTE D+VNC FYFKIGACRHGDRCSR H KPS S T+L+ N+YQ P
Sbjct: 1 MANFLASIFGTELDKVNCSFYFKIGACRHGDRCSRKHVKPSYSQTILMPNLYQ-----NP 55
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
DP+ + ++P ++Q+HF+ FYED++ EL KYGE+E L +CDN DH++GNVY +F+ E+
Sbjct: 56 AYDPKNR-MNPSQLQNHFDAFYEDIWCELCKYGELEELVVCDNNNDHLIGNVYARFKYED 114
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A +LN R+YA RPI + SPVTDFREA CR C RGG+CNF+H K S +L
Sbjct: 115 SAQKACDDLNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSEDL 174
Query: 181 RRRL------FGRSRRRRSRSRSRSRSPHKYRGGY 209
R L + + R R RS SRS +P R Y
Sbjct: 175 DRDLTLSTKKWLKDRGRDERSPSRSPTPEPTRRRY 209
>gi|429851228|gb|ELA26437.1| u2 auxiliary factor small [Colletotrichum gloeosporioides Nara gc5]
Length = 208
Score = 223 bits (568), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 113/212 (53%), Positives = 143/212 (67%), Gaps = 12/212 (5%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA LASIFGTE D+VNC FYFKIGACRHGDRCSR H KPS S T+L+ N+YQ P
Sbjct: 1 MANFLASIFGTELDKVNCSFYFKIGACRHGDRCSRKHVKPSYSQTILMPNLYQ-----NP 55
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
DP+ + ++P ++Q+HF+ FYED++ EL KYGE+E L +CDN DH++GNVY +F+ E+
Sbjct: 56 AYDPKNR-MNPSQLQNHFDAFYEDIWCELCKYGELEELVVCDNNNDHLIGNVYARFKYED 114
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A +LN R+YA RPI + SPVTDFREA CR C RGG+CNF+H K S +L
Sbjct: 115 SAQKACDDLNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSEDL 174
Query: 181 RRRL------FGRSRRRRSRSRSRSRSPHKYR 206
R L + + R R RS SRS +P R
Sbjct: 175 DRDLTLSTKKWLKDRGRDERSPSRSPTPEPTR 206
>gi|320163034|gb|EFW39933.1| U2(RNU2) small nuclear RNA auxiliary factor 1 [Capsaspora
owczarzaki ATCC 30864]
Length = 211
Score = 223 bits (568), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 104/190 (54%), Positives = 137/190 (72%), Gaps = 6/190 (3%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE L+S+ GTEKD+ NC FYFK+GACRHG RCSRLH KP+ SPT+LL N Y+ P
Sbjct: 1 MAEFLSSVHGTEKDKGNCSFYFKMGACRHGARCSRLHIKPTFSPTILLPNFYKSP--YPN 58
Query: 61 GVDPQGQALDPRKI---QDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQF 116
+P+ +DP + QDHF++FYED+F E+ KYG +E +N+CDNL++H+VGN YV+F
Sbjct: 59 PANPESGPIDPETMLASQDHFDEFYEDVFTEMEEKYGAVEEMNVCDNLSEHLVGNTYVKF 118
Query: 117 REEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKI 176
R EE A A +LN R++ GR + + S VTDF EA CRQY+ C GG+CNFMH+K I
Sbjct: 119 RREEDAERAAEDLNNRWFDGRVVSAELSTVTDFNEACCRQYDIGQCKFGGFCNFMHIKPI 178
Query: 177 SRELRRRLFG 186
S+ELRR ++G
Sbjct: 179 SKELRREIYG 188
>gi|452983858|gb|EME83616.1| hypothetical protein MYCFIDRAFT_85447 [Pseudocercospora fijiensis
CIRAD86]
Length = 209
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 112/208 (53%), Positives = 143/208 (68%), Gaps = 12/208 (5%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA +LASIFGTE+D+VNC FY+KIGACRHGDRCSR H KPS S T+LL N+YQ P
Sbjct: 1 MANYLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQ-----NP 55
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
D + + ++P+++Q+HF+ FYED + E+ K+GEIE + +CDN DH++GNVY +F+ EE
Sbjct: 56 AYDNKSR-MNPQQLQNHFDAFYEDFWCEMCKFGEIEEVVVCDNNNDHLIGNVYARFKYEE 114
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A LN R+YA RPI + SPVTDFREA CR C RGG+CNF+H K+ S EL
Sbjct: 115 SAQKACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSPEL 174
Query: 181 RRRL------FGRSRRRRSRSRSRSRSP 202
R L + R R R RS +RS SP
Sbjct: 175 ERELELATKKWLRERGRDPRSVTRSPSP 202
>gi|407919834|gb|EKG13056.1| Inositol monophosphatase [Macrophomina phaseolina MS6]
Length = 209
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 112/212 (52%), Positives = 143/212 (67%), Gaps = 12/212 (5%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA +LASIFGTE+D+VNC FY+KIGACRHGDRCSR H KPS S T+LL N+YQ P
Sbjct: 1 MANYLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQ-----NP 55
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
DP+ + ++ ++Q+HF+ FYED + E+ KYGE+E + +CDN DH++GNVY +F+ E+
Sbjct: 56 AYDPKNK-MNASQLQNHFDAFYEDFWCEMCKYGELEEVVVCDNNNDHLIGNVYARFKYED 114
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A +LN R+YA RPI + SPVTDFREA CR C RGG+CNF+H K S EL
Sbjct: 115 SAQKACDDLNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKVPSPEL 174
Query: 181 RRRL------FGRSRRRRSRSRSRSRSPHKYR 206
R L + + R R RS SRS SP R
Sbjct: 175 ERELELSTKKWLKMRGRDERSVSRSPSPEPTR 206
>gi|449268664|gb|EMC79513.1| Splicing factor U2AF 35 kDa subunit, partial [Columba livia]
Length = 222
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 101/172 (58%), Positives = 130/172 (75%), Gaps = 1/172 (0%)
Query: 15 RVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKI 74
RVNC FYFKIGACRHGDRCSRLH KP+ S T+L+ N+Y+ P D A+ ++
Sbjct: 1 RVNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRNPQNSAQTADGSHCAVSDVEM 60
Query: 75 QDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRF 133
Q+H+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR EE A A+ +LN R+
Sbjct: 61 QEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRW 120
Query: 134 YAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLF 185
+ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISRELRR L+
Sbjct: 121 FNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 172
>gi|355560252|gb|EHH16938.1| hypothetical protein EGK_13202, partial [Macaca mulatta]
gi|355747336|gb|EHH51833.1| hypothetical protein EGM_12135, partial [Macaca fascicularis]
Length = 226
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 101/172 (58%), Positives = 130/172 (75%), Gaps = 1/172 (0%)
Query: 15 RVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKI 74
RVNC FYFKIGACRHGDRCSRLH KP+ S T+L+ N+Y+ P D A+ ++
Sbjct: 1 RVNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRNPQNSAQTADGSHCAVSDVEM 60
Query: 75 QDHFEDFYEDLFEEL-SKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRF 133
Q+H+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR EE A A+ +LN R+
Sbjct: 61 QEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRW 120
Query: 134 YAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLF 185
+ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISRELRR L+
Sbjct: 121 FNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 172
>gi|71019619|ref|XP_760040.1| hypothetical protein UM03893.1 [Ustilago maydis 521]
gi|46099833|gb|EAK85066.1| hypothetical protein UM03893.1 [Ustilago maydis 521]
Length = 279
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 117/258 (45%), Positives = 162/258 (62%), Gaps = 14/258 (5%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA +LASI+GTE+D+VNC FY+KIGACRHGDRCSR H +P S TLLLSN+Y+ P
Sbjct: 1 MASYLASIYGTEQDKVNCSFYYKIGACRHGDRCSRKHIRPPYSCTLLLSNVYRNPRH--- 57
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
Q + ++Q F+ FYED+F EL+KYG++ +++CDN+ DH++GNVY +++ E
Sbjct: 58 --HEQDCTITDTELQAQFDAFYEDMFTELAKYGQLVEMHVCDNVGDHLIGNVYARYKYEA 115
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISR-- 178
A A+ LN R+Y +P+ + SPVTDF+EA CRQ E N CNRGG+CNFMHL+ SR
Sbjct: 116 DAQRAVDALNDRWYDAKPLFAELSPVTDFQEACCRQNETNECNRGGFCNFMHLRYASRPI 175
Query: 179 --ELRRRLFGRSRRRRSRSRSRSRSPHKYRGGYEER--SHGGGRGSGRRDDDRDHRLHGR 234
EL +L RRR+ R ++ K R G++ER G + DD + +G+
Sbjct: 176 RKELNHQLAVELRRRKEEGRDTAKGVKK-RLGWKERLALEQGDTLADVEGDDGNREENGK 234
Query: 235 GRRPRSRSPGRRGGRSRS 252
+ R G+ GG RS
Sbjct: 235 AK--RDWRSGKSGGDWRS 250
>gi|452845011|gb|EME46945.1| hypothetical protein DOTSEDRAFT_70773 [Dothistroma septosporum
NZE10]
Length = 209
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 114/215 (53%), Positives = 144/215 (66%), Gaps = 12/215 (5%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA +LASIFGTE+D+VNC FY+KIGACRHGDRCSR H KPS S T+LL N+YQ P
Sbjct: 1 MANYLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTVLLPNLYQ-----NP 55
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
D + + ++P ++Q+HF+ FYED + E+ KYGEIE + +CDN DH++GNVY +F+ E+
Sbjct: 56 AYDNKSR-MNPSQLQNHFDAFYEDFWCEMCKYGEIEEVVVCDNNNDHLIGNVYARFKYED 114
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A LN R+YA RPI + SPVTDFREA CR C RGG+CNF+H K+ S EL
Sbjct: 115 SAQKACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSAEL 174
Query: 181 RRRL------FGRSRRRRSRSRSRSRSPHKYRGGY 209
R L + R R R RS +RS SP R Y
Sbjct: 175 DRELELATKKWLRERGRDDRSVTRSPSPEPTRPRY 209
>gi|268534530|ref|XP_002632396.1| C. briggsae CBR-UAF-2 protein [Caenorhabditis briggsae]
Length = 281
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 105/194 (54%), Positives = 139/194 (71%), Gaps = 6/194 (3%)
Query: 2 AEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMIT-- 59
AE+LASI+GTEKD+VNC F+FK GACRHGD+CSR H P+ SPT++L N Y P +
Sbjct: 10 AEYLASIYGTEKDKVNCSFFFKTGACRHGDKCSRAHHTPTFSPTVVLKNFYHNPVVDVRQ 69
Query: 60 -PGVDPQGQALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFR 117
D G+ D Q +F+DFYE++F E+ KYGE+E +N+C+N+ +HMVGNVYV+F
Sbjct: 70 ADAFDKVGKRNDEE--QRYFDDFYEEVFVEMERKYGEVEEINVCENIGEHMVGNVYVKFM 127
Query: 118 EEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIS 177
+EE A A +LN R++ G+PI + PVTDFRE+ CRQ+E C++GG+CNFMHLK IS
Sbjct: 128 KEEDAEKAKNDLNNRWFNGQPIYAELCPVTDFRESRCRQHEVTTCSKGGFCNFMHLKAIS 187
Query: 178 RELRRRLFGRSRRR 191
EL RL+GR RR
Sbjct: 188 AELGDRLYGRRGRR 201
>gi|308482690|ref|XP_003103548.1| CRE-UAF-2 protein [Caenorhabditis remanei]
gi|308259969|gb|EFP03922.1| CRE-UAF-2 protein [Caenorhabditis remanei]
Length = 287
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 105/194 (54%), Positives = 139/194 (71%), Gaps = 6/194 (3%)
Query: 2 AEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMIT-- 59
AE+LASI+GTEKD+VNC F+FK GACRHGD+CSR H P+ SPT++L N Y P +
Sbjct: 10 AEYLASIYGTEKDKVNCSFFFKTGACRHGDKCSRAHHTPTFSPTVVLKNFYHNPVVDVRQ 69
Query: 60 -PGVDPQGQALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFR 117
D G+ D Q +F+DFYE++F E+ KYGE+E +N+C+N+ +HMVGNVYV+F
Sbjct: 70 ADAFDKVGKRNDEE--QRYFDDFYEEVFVEMERKYGEVEEINVCENIGEHMVGNVYVKFM 127
Query: 118 EEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIS 177
+EE A A +LN R++ G+PI + PVTDFRE+ CRQ+E C++GG+CNFMHLK IS
Sbjct: 128 KEEDAEKAKNDLNNRWFNGQPIYAELCPVTDFRESRCRQHEVTTCSKGGFCNFMHLKAIS 187
Query: 178 RELRRRLFGRSRRR 191
EL RL+GR RR
Sbjct: 188 AELGDRLYGRRGRR 201
>gi|341886073|gb|EGT42008.1| CBN-UAF-2 protein [Caenorhabditis brenneri]
Length = 278
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 105/194 (54%), Positives = 139/194 (71%), Gaps = 6/194 (3%)
Query: 2 AEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMIT-- 59
AE+LASI+GTEKD+VNC F+FK GACRHGD+CSR H P+ SPT++L N Y P +
Sbjct: 10 AEYLASIYGTEKDKVNCSFFFKTGACRHGDKCSRAHHTPTFSPTVVLKNFYHNPVVDVRQ 69
Query: 60 -PGVDPQGQALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFR 117
D G+ D Q +F+DFYE++F E+ KYGE+E +N+C+N+ +HMVGNVYV+F
Sbjct: 70 ADAFDKVGKRNDEE--QRYFDDFYEEVFVEMERKYGEVEEINVCENIGEHMVGNVYVKFM 127
Query: 118 EEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIS 177
+EE A A +LN R++ G+PI + PVTDFRE+ CRQ+E C++GG+CNFMHLK IS
Sbjct: 128 KEEDAEKAKNDLNNRWFNGQPIYAELCPVTDFRESRCRQHEVTTCSKGGFCNFMHLKAIS 187
Query: 178 RELRRRLFGRSRRR 191
EL RL+GR RR
Sbjct: 188 SELGDRLYGRRGRR 201
>gi|302414438|ref|XP_003005051.1| splicing factor U2AF 23 kDa subunit [Verticillium albo-atrum
VaMs.102]
gi|261356120|gb|EEY18548.1| splicing factor U2AF 23 kDa subunit [Verticillium albo-atrum
VaMs.102]
gi|346979310|gb|EGY22762.1| splicing factor U2AF 23 kDa subunit [Verticillium dahliae VdLs.17]
Length = 210
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 113/212 (53%), Positives = 142/212 (66%), Gaps = 12/212 (5%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA LASIFGTE D+VNC FYFKIGACRHGDRCSR H KPS S T+L+ N+YQ P
Sbjct: 1 MANFLASIFGTELDKVNCSFYFKIGACRHGDRCSRKHVKPSYSQTILMPNLYQ-----NP 55
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
DP+ + ++P ++Q+HF+ FYED++ EL +YGE+E L +CDN DH++GNVY +F+ E+
Sbjct: 56 AYDPKNR-MNPSQLQNHFDAFYEDIWCELCQYGELEELVVCDNNNDHLIGNVYARFKYED 114
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A LN R+YA RPI + SPVTDFREA CR C RGG+CNF+H K S EL
Sbjct: 115 SAQKACDALNSRWYAARPIYAELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSDEL 174
Query: 181 RRRL------FGRSRRRRSRSRSRSRSPHKYR 206
R L + + R R RS SRS +P R
Sbjct: 175 DRELVLSTKKWLKDRGRDERSPSRSPTPEPTR 206
>gi|367052051|ref|XP_003656404.1| hypothetical protein THITE_2091571 [Thielavia terrestris NRRL 8126]
gi|347003669|gb|AEO70068.1| hypothetical protein THITE_2091571 [Thielavia terrestris NRRL 8126]
Length = 231
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 112/214 (52%), Positives = 144/214 (67%), Gaps = 11/214 (5%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA LASIFGTE+D+VNC FY+KIGACRHGDRCSR H KPS S T+L+ N+YQ P
Sbjct: 24 MANFLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILMPNLYQ-----NP 78
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
DP+ + ++ ++Q+HF+ FYED++ E+ KYGE+E L +CDN DH++GNVY +F+ E+
Sbjct: 79 AFDPKNR-MNASQLQNHFDAFYEDIWCEMCKYGELEELVVCDNNNDHLIGNVYARFKYED 137
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A LN R+YA RPI + SPVTDFREA CR C RGG+CNF+H K S EL
Sbjct: 138 SAQKACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKDPSPEL 197
Query: 181 RRRLFGRSRRR-----RSRSRSRSRSPHKYRGGY 209
R L +++ RSRS +RS SP R Y
Sbjct: 198 ERELQLATKKWLKMKPRSRSPTRSPSPEPVRRRY 231
>gi|17544466|ref|NP_503036.1| Protein UAF-2 [Caenorhabditis elegans]
gi|5832799|emb|CAB55137.1| Protein UAF-2 [Caenorhabditis elegans]
Length = 285
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 105/194 (54%), Positives = 139/194 (71%), Gaps = 6/194 (3%)
Query: 2 AEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMIT-- 59
AE+LASI+GTEKD+VNC F+FK GACRHGD+CSR H P+ SPT++L N Y P +
Sbjct: 10 AEYLASIYGTEKDKVNCSFFFKTGACRHGDKCSRAHHTPTFSPTVVLKNFYHNPVVDVRQ 69
Query: 60 -PGVDPQGQALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFR 117
D G+ D Q +F+DFYE++F E+ KYGE+E +N+C+N+ +HMVGNVYV+F
Sbjct: 70 ADAFDKVGKRNDQE--QRYFDDFYEEVFVEMERKYGEVEEINVCENIGEHMVGNVYVKFM 127
Query: 118 EEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIS 177
+EE A A +LN R++ G+PI + PVTDFRE+ CRQ+E C++GG+CNFMHLK IS
Sbjct: 128 KEEDAEKAKNDLNNRWFNGQPIYAELCPVTDFRESRCRQHEVTTCSKGGFCNFMHLKAIS 187
Query: 178 RELRRRLFGRSRRR 191
EL RL+GR RR
Sbjct: 188 AELGDRLYGRRGRR 201
>gi|170117299|ref|XP_001889837.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164635177|gb|EDQ99488.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 229
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 122/250 (48%), Positives = 156/250 (62%), Gaps = 29/250 (11%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA HLA+IFGTE+DRVNC FY+KIGACRHGDRCSR H KP S T+LL N+Y P
Sbjct: 1 MASHLANIFGTEQDRVNCSFYYKIGACRHGDRCSRKHIKPPFSQTILLPNVYH-----NP 55
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
DP + L +++Q+ F+ YEDL+ ELSK+G + L++CDN+ DH++GNVY ++ E
Sbjct: 56 AHDPVCK-LTEKELQEGFDAVYEDLYCELSKFGHLLELHVCDNVGDHLIGNVYARYEWET 114
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A+ + N R+YAGRP+ + SPVTDFREA CRQ E CNRGG+CNFMHL+ S++L
Sbjct: 115 EAQAAVDSCNERWYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHLRLASKDL 174
Query: 181 RRRLFGRSRRRRSRSRSRSRSPHKYRGGYEERSHGGGRGSGRRDDDRDHRLHGRGRRPRS 240
L R + R +P K G GGG G+R+ G R RS
Sbjct: 175 VSSL------RAGQRLERRLNPSKNESG------GGGWEPGKRE----------GGRGRS 212
Query: 241 RSPGRRGGRS 250
SP RRGG S
Sbjct: 213 ASP-RRGGHS 221
>gi|116182458|ref|XP_001221078.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88186154|gb|EAQ93622.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 208
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 108/202 (53%), Positives = 141/202 (69%), Gaps = 7/202 (3%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA LASIFGTE+D+VNC FY+KIGACRHGDRCSR H KPS S T+L+ N+YQ P
Sbjct: 1 MANFLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILMPNLYQ-----NP 55
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
DP+ + ++ ++Q+HF+ FYED++ E+ KYGE+E L +CDN DH++GNVY +F+ E+
Sbjct: 56 AFDPKNR-MNASQLQNHFDAFYEDIWCEMCKYGEVEELVVCDNNNDHLIGNVYARFKYED 114
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A +LN R+YA RPI + SPVTDFREA CR C RGG+CNF+H K EL
Sbjct: 115 SAQKACDDLNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPGPEL 174
Query: 181 RRRLFGRSRRRRSRSRSRSRSP 202
R L S ++ ++R RSRSP
Sbjct: 175 DREL-ELSTKKWLKTRPRSRSP 195
>gi|395851239|ref|XP_003798173.1| PREDICTED: splicing factor U2AF 35 kDa subunit [Otolemur garnettii]
Length = 223
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 105/186 (56%), Positives = 133/186 (71%), Gaps = 17/186 (9%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLH KP+ S T+ L N+Y+ P +
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQ 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEEL-SKYGEIESLNICDNLADHMVGNVYVQFREE 119
D A+ ++Q+H+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVY
Sbjct: 61 SADGLRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVY------ 114
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
N R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISRE
Sbjct: 115 ----------NNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE 164
Query: 180 LRRRLF 185
LRR L+
Sbjct: 165 LRRELY 170
>gi|296810970|ref|XP_002845823.1| splicing factor U2AF subunit [Arthroderma otae CBS 113480]
gi|238843211|gb|EEQ32873.1| splicing factor U2AF subunit [Arthroderma otae CBS 113480]
Length = 209
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 113/215 (52%), Positives = 144/215 (66%), Gaps = 12/215 (5%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA +LASIFGTE+D+VNC FY+KIGACRHGDRCSR H KPS S T+LL N+YQ P
Sbjct: 1 MANYLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQNPQY--- 57
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
D + + ++P ++Q+HF+ FYED + E+ KYGEIE + +C+N DH++GNVY +F+ E+
Sbjct: 58 --DSKNK-MNPSQLQNHFDAFYEDFWCEMCKYGEIEEVVVCENNNDHLIGNVYARFKYED 114
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A LN R+YA RPI + SPVTDFREA CR C RGG+CNF+H K+ S EL
Sbjct: 115 SAQKACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSEEL 174
Query: 181 RRRL------FGRSRRRRSRSRSRSRSPHKYRGGY 209
R L + R R R RS +RS SP R Y
Sbjct: 175 DRELDLSTKKWLRLRGRDERSMTRSPSPEPTRKRY 209
>gi|353245348|emb|CCA76358.1| related to splicing factor U2AF 35 kd subunit [Piriformospora
indica DSM 11827]
Length = 217
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 103/184 (55%), Positives = 133/184 (72%), Gaps = 6/184 (3%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA HLA+IFGTE+DRVNC FY+KIGACRHGDRCSR H +P S T+LL N+Y P
Sbjct: 1 MASHLANIFGTEQDRVNCSFYYKIGACRHGDRCSRKHIRPPFSQTILLPNVYH-----NP 55
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
DP + L +++Q+ F+ YEDL+ EL+K+G + L++CDN+ DH++GNVY +F E
Sbjct: 56 ANDPNCK-LSAKELQEGFDAVYEDLYCELTKFGHLLELHVCDNVGDHLIGNVYARFEWET 114
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A+ NLN R+YAGRP+ + SPVTDFREA CRQ E CNRGG+CNFMHL+ S EL
Sbjct: 115 EAQAAVDNLNERWYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHLRLASPEL 174
Query: 181 RRRL 184
++ L
Sbjct: 175 KKSL 178
>gi|261196914|ref|XP_002624860.1| splicing factor U2AF 35 kDa subunit [Ajellomyces dermatitidis
SLH14081]
gi|225562652|gb|EEH10931.1| splicing factor U2AF 23 kDa subunit [Ajellomyces capsulatus G186AR]
gi|239596105|gb|EEQ78686.1| splicing factor U2AF 35 kDa subunit [Ajellomyces dermatitidis
SLH14081]
gi|239609690|gb|EEQ86677.1| splicing factor U2AF 35 kDa subunit [Ajellomyces dermatitidis ER-3]
gi|240279459|gb|EER42964.1| splicing factor U2AF 23 kDa subunit [Ajellomyces capsulatus H143]
gi|325092588|gb|EGC45898.1| splicing factor U2AF 23 kDa subunit [Ajellomyces capsulatus H88]
gi|327355349|gb|EGE84206.1| splicing factor U2AF 35 kDa subunit [Ajellomyces dermatitidis ATCC
18188]
Length = 209
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 112/215 (52%), Positives = 142/215 (66%), Gaps = 12/215 (5%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA +LASIFGTE+D+VNC FY+KIGACRHGDRCSR H KPS S T+LL N+YQ P T
Sbjct: 1 MANYLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQNPAYDT- 59
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
++P ++Q+HF+ FYED + E+ KYGE+E + +CDN DH++GNVY +F+ E+
Sbjct: 60 -----KNKMNPSQLQNHFDAFYEDFWCEMCKYGELEEVVVCDNNNDHLIGNVYARFKYED 114
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A LN R+YA RPI + SPVTDFREA CR C RGG+CNF+H K+ S EL
Sbjct: 115 SAQQACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSPEL 174
Query: 181 RRRL------FGRSRRRRSRSRSRSRSPHKYRGGY 209
R L + + R R RS +RS SP R Y
Sbjct: 175 ERELELSTKKWLKMRGRDERSVTRSPSPEPTRRRY 209
>gi|426219497|ref|XP_004003958.1| PREDICTED: splicing factor U2AF 35 kDa subunit [Ovis aries]
Length = 332
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 100/172 (58%), Positives = 130/172 (75%), Gaps = 1/172 (0%)
Query: 15 RVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKI 74
+VNC FYFKIGACRHGDRCSRLH KP+ S T+L+ N+Y+ P D A+ ++
Sbjct: 97 QVNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRNPQNSAQTADGSHCAVSDVEM 156
Query: 75 QDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRF 133
Q+H+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR EE A A+ +LN R+
Sbjct: 157 QEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRW 216
Query: 134 YAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLF 185
+ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISRELRR L+
Sbjct: 217 FNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 268
>gi|302915833|ref|XP_003051727.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256732666|gb|EEU46014.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 209
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 114/215 (53%), Positives = 142/215 (66%), Gaps = 12/215 (5%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA LASIFGTE D+VNC FYFKIGACRHGDRCSR H KPS S T+L+ N+YQ P
Sbjct: 1 MANFLASIFGTELDKVNCSFYFKIGACRHGDRCSRKHVKPSYSQTILMPNLYQ-----NP 55
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
DP+ + ++ ++Q+HF+ FYED++ EL KYGE+E L +CDN DH++GNVY +F+ EE
Sbjct: 56 AYDPKNR-MNQSQLQNHFDAFYEDIWCELCKYGELEELVVCDNNNDHLIGNVYARFKYEE 114
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A LN R+YA RPI + SPVTDFREA CR C RGG+CNF+H K S EL
Sbjct: 115 SAQKACDELNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSEEL 174
Query: 181 RRRL------FGRSRRRRSRSRSRSRSPHKYRGGY 209
R L + + R R +S SRS +P R Y
Sbjct: 175 DRDLQLSTKKWLKQRGRDEKSVSRSPTPEPTRRRY 209
>gi|154301115|ref|XP_001550971.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
gi|156056997|ref|XP_001594422.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980]
gi|154702015|gb|EDO01754.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980
UF-70]
gi|347840346|emb|CCD54918.1| similar to splicing factor U2af 38 kDa subunit [Botryotinia
fuckeliana]
Length = 210
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 113/215 (52%), Positives = 142/215 (66%), Gaps = 12/215 (5%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA +LASIFGTE D+VNC FY+KIGACRHGDRCSR H KPS S T+LL N+YQ P
Sbjct: 1 MANYLASIFGTEADKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQ-----NP 55
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
DP+ + ++ ++Q+HF+ FYED + E+ K+GEIE + +CDN DH++GNVY +F+ E+
Sbjct: 56 AYDPKNK-MNASQLQNHFDAFYEDFWCEMCKFGEIEEVVVCDNNNDHLIGNVYARFKYED 114
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A LN R+YA RPI + SPVTDFREA CR C RGG+CNF+H K S EL
Sbjct: 115 SAQKACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSDEL 174
Query: 181 RRRL------FGRSRRRRSRSRSRSRSPHKYRGGY 209
R L + R R R RS +RS SP R Y
Sbjct: 175 DRELELSTKKWLRMRGRDERSVTRSPSPEPTRKRY 209
>gi|453086343|gb|EMF14385.1| splicing factor U2AF 35 kDa subunit [Mycosphaerella populorum
SO2202]
Length = 209
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 112/215 (52%), Positives = 144/215 (66%), Gaps = 12/215 (5%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA +LASIFGTE+D+VNC FY+KIGACRHGDRCSR H KPS S T+LL N+YQ P
Sbjct: 1 MANYLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQ-----NP 55
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
D + + ++P+++Q+HF+ FYED + E+ KYGEIE + +CDN DH++GNVY +F+ E+
Sbjct: 56 AYDNKSR-MNPQQLQNHFDAFYEDFWCEMCKYGEIEEVVVCDNNNDHLIGNVYARFKYED 114
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A LN R+YA RPI + SPVTDFREA CR C RGG+CNF+H K+ EL
Sbjct: 115 SAQKACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPGPEL 174
Query: 181 RRRL------FGRSRRRRSRSRSRSRSPHKYRGGY 209
R L + R R R RS +RS SP + Y
Sbjct: 175 ERELELATKKWLRERGRDERSVTRSASPEPLKPRY 209
>gi|169846828|ref|XP_001830128.1| splicing factor U2AF 26 kDa subunit [Coprinopsis cinerea
okayama7#130]
gi|116508898|gb|EAU91793.1| splicing factor U2AF 26 kDa subunit [Coprinopsis cinerea
okayama7#130]
Length = 230
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 121/253 (47%), Positives = 154/253 (60%), Gaps = 34/253 (13%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA HLA+IFGTE+DRVNC FY+KIGACRHGDRCSR H KP S T+LL N+Y P
Sbjct: 1 MASHLANIFGTEQDRVNCSFYYKIGACRHGDRCSRKHIKPPFSQTILLPNVYH-----NP 55
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
DP + L +++Q+ F+ YEDL+ EL+K+G + L++CDN+ DH++GNVY ++ E
Sbjct: 56 AHDPVCK-LTEKELQEGFDAVYEDLYCELAKFGHLLELHVCDNVGDHLIGNVYARYEWET 114
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A+ + N R+YAGRP+ + SPVTDFREA CRQ E CNRGG+CNFMHL+ S EL
Sbjct: 115 EAQAAVDSCNERWYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHLRLPSPEL 174
Query: 181 RRRLFGRSRRRRSRSRSRSRSPHKYR---GGYEERSHGGGRGSGRRDDDRDHRLHGRGRR 237
R+L R + R +P K GG+E GGRG
Sbjct: 175 LRQL------RHGQRLERKLNPPKNENGAGGWEPSKREGGRG------------------ 210
Query: 238 PRSRSPGRRGGRS 250
RS SPGRR S
Sbjct: 211 -RSASPGRRTTHS 222
>gi|340371029|ref|XP_003384048.1| PREDICTED: splicing factor U2af 38 kDa subunit-like [Amphimedon
queenslandica]
Length = 188
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 102/187 (54%), Positives = 138/187 (73%), Gaps = 8/187 (4%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FY KIGACRHGD+CSRLH KP+ S T++L N+YQ P T
Sbjct: 1 MAEYLASIFGTEKDKVNCAFYHKIGACRHGDQCSRLHNKPTFSQTVMLQNLYQNP---TR 57
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREE 119
G+ + P + Q HFE+F+ED+F E KYG IE +++CDNL DH++GNVY++FR E
Sbjct: 58 GIT----TVSPEEEQSHFEEFFEDVFIECEEKYGPIEKMHVCDNLGDHLIGNVYIKFRFE 113
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
E A A+++LN R++ +P+ + SPVT+F+EA C Q++ C RGG+CNF H+K I +
Sbjct: 114 EDAEKAVQSLNNRWFNAQPVRAELSPVTNFKEACCHQFDVGQCGRGGFCNFWHIKPIPHK 173
Query: 180 LRRRLFG 186
LRR L+G
Sbjct: 174 LRRFLYG 180
>gi|396460408|ref|XP_003834816.1| similar to splicing factor U2AF 35 kDa subunit [Leptosphaeria
maculans JN3]
gi|312211366|emb|CBX91451.1| similar to splicing factor U2AF 35 kDa subunit [Leptosphaeria
maculans JN3]
Length = 207
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 111/208 (53%), Positives = 144/208 (69%), Gaps = 12/208 (5%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA +LASIFGTE+D+VNC FY+KIGACRHGDRCSR H KPS S T+LL N+YQ P
Sbjct: 1 MANYLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQ-----NP 55
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
DP+ + ++ +++Q HF+ FYED++ EL ++G +E L +CDN DH++GNVYV+F+ EE
Sbjct: 56 AYDPKNK-MNAQQMQMHFDAFYEDIWCELCQFGLVEELVVCDNNNDHLIGNVYVRFKYEE 114
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
+ A LN R+YAGRPI + SPVTDFREA CR C RGG+CNF+H K+ S EL
Sbjct: 115 DSQKACDALNSRWYAGRPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSPEL 174
Query: 181 RRRL------FGRSRRRRSRSRSRSRSP 202
R L + + R R RS SRS +P
Sbjct: 175 ERELDMCTRKWLKERGRDPRSMSRSPTP 202
>gi|71027337|ref|XP_763312.1| U2 small nuclear ribonucleoprotein, auxiliary factor, small subunit
[Theileria parva strain Muguga]
gi|68350265|gb|EAN31029.1| U2 small nuclear ribonucleoprotein, auxiliary factor, small
subunit, putative [Theileria parva]
Length = 235
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 130/283 (45%), Positives = 171/283 (60%), Gaps = 55/283 (19%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDM--- 57
MAEHLA I GTE+DRVNCPF++KIGACRHGD+CSR H KPS + TL++ +MYQ P +
Sbjct: 1 MAEHLARIIGTEEDRVNCPFFWKIGACRHGDQCSRTHYKPSAAQTLVIRHMYQNPPVAIA 60
Query: 58 ITPGVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFR 117
I G + LD K DHFE+F+E++F EL KYGEIE + +CDN+ DH++GNVY+++
Sbjct: 61 IAEGQMISDELLD--KAADHFEEFFEEVFLELMKYGEIEDMIVCDNIGDHIIGNVYIKYS 118
Query: 118 EEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIS 177
+E A A+ +L+GR+Y GRPI +++PVTDFREA CRQ+ E C RGGYCNFMH+K +
Sbjct: 119 DEAAACRAVTSLSGRYYGGRPIQCEYTPVTDFREARCRQFVEGQCRRGGYCNFMHIKHVP 178
Query: 178 RELRRRLFGRSRRRRSRSRSRSRSPHKYRGGYEERSHGGGRGSGRRDDDRDHRLHGRGRR 237
R LRR+L +R + + R+P R
Sbjct: 179 RSLRRKLM--TRMYQEFPEYKKRTP----------------------------------R 202
Query: 238 PRSRSPGRRGGRSRSPGARRRSPVRESSVERRAKIEQWNREKE 280
RS SP RR R++S ERR IEQWNRE+E
Sbjct: 203 HRSASPYRRK--------------RQTSEERRDMIEQWNRERE 231
>gi|85112805|ref|XP_964414.1| splicing factor U2AF 23 kDa subunit [Neurospora crassa OR74A]
gi|336267438|ref|XP_003348485.1| hypothetical protein SMAC_02979 [Sordaria macrospora k-hell]
gi|28926195|gb|EAA35178.1| splicing factor U2AF 23 kDa subunit [Neurospora crassa OR74A]
gi|336464311|gb|EGO52551.1| splicing factor U2AF 23 kDa subunit [Neurospora tetrasperma FGSC
2508]
gi|350296398|gb|EGZ77375.1| splicing factor U2AF 23 kDa subunit [Neurospora tetrasperma FGSC
2509]
gi|380092140|emb|CCC10408.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 208
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 109/205 (53%), Positives = 142/205 (69%), Gaps = 9/205 (4%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA LASIFGTE+D+VNC FY+KIGACRHGDRCSR H KPS S T+L+ N+Y P
Sbjct: 1 MANFLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILMPNLYH-----NP 55
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
DP+ + ++ ++Q+HF+ FYED++ E+ KYGE+E L +CDN DH++GNVY +F+ E+
Sbjct: 56 AFDPKNR-MNASQLQNHFDAFYEDIWCEMCKYGELEELVVCDNNNDHLIGNVYARFKYED 114
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A +LN R+YA RPI + SPVTDFREA CR C RGG+CNF+H K S EL
Sbjct: 115 SAQKACDDLNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSPEL 174
Query: 181 RRRLFGRSR---RRRSRSRSRSRSP 202
R L ++ + R RSRS +RSP
Sbjct: 175 ERELELSTKKWLKMRPRSRSPTRSP 199
>gi|328875135|gb|EGG23500.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 447
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 109/207 (52%), Positives = 137/207 (66%), Gaps = 19/207 (9%)
Query: 1 MAEHLASIFGTEKD------------------RVNCPFYFKIGACRHGDRCSRLHTKPSI 42
MA+ A++FGTEKD R NCPFY KIGACRHGDRCSRLH KP +
Sbjct: 1 MADRRAAMFGTEKDHTNHIFSIYSFFLFFLSIRQNCPFYLKIGACRHGDRCSRLHNKPIV 60
Query: 43 SPTLLLSNMYQRPDMITPGVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICD 102
S T++L N+YQ P + P QA +IQ HF++FYEDL E LSKYG +E +++C
Sbjct: 61 SHTVILPNLYQSPYLRRGQNQPPVQATQ-EEIQKHFDEFYEDLHEGLSKYGRVELMHVCA 119
Query: 103 NLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVC 162
NL DH++GNVYV++ EE A A+ L GRFY GRPI+ +FSPVTDF E+ CRQ++ C
Sbjct: 120 NLGDHLIGNVYVKYDTEEAAGAAVEGLRGRFYDGRPIVAEFSPVTDFNESRCRQFDMGTC 179
Query: 163 NRGGYCNFMHLKKISRELRRRLFGRSR 189
+RGGYCNFMHL S+ L +LFG R
Sbjct: 180 DRGGYCNFMHLHLPSKPLSIKLFGDRR 206
>gi|432116144|gb|ELK37266.1| Splicing factor U2AF 35 kDa subunit [Myotis davidii]
Length = 244
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 101/172 (58%), Positives = 130/172 (75%), Gaps = 1/172 (0%)
Query: 15 RVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKI 74
RVNC FYFKIGACRHGDRCSRLH KP+ S T+ L N+Y+ P + D A+ ++
Sbjct: 19 RVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSADGLRCAVSDVEM 78
Query: 75 QDHFEDFYEDLFEEL-SKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRF 133
Q+H+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR EE A A+ +LN R+
Sbjct: 79 QEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRW 138
Query: 134 YAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLF 185
+ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISRELRR L+
Sbjct: 139 FNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 190
>gi|402074537|gb|EJT70046.1| splicing factor U2AF 23 kDa subunit [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 209
Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 114/212 (53%), Positives = 140/212 (66%), Gaps = 12/212 (5%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA LASIFGTE+D+VNC FYFKIGACRHGDRCSR H KP+ S T+L+ NMYQ P
Sbjct: 1 MANFLASIFGTEQDKVNCSFYFKIGACRHGDRCSRKHVKPTYSQTILMPNMYQ-----NP 55
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
DP+ + ++ + Q+HF+ FYEDL+ EL KYGE+E L +CDN DH++GNVY +F+ E+
Sbjct: 56 AHDPKNR-MNESQAQNHFDAFYEDLWCELCKYGELEELVVCDNNNDHLIGNVYARFKYED 114
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A LN R+YA RPI + SPVTDFREA CR C R G+CNF+H K S EL
Sbjct: 115 SAQKACDELNNRWYAARPIYCELSPVTDFREACCRLNSGEGCARAGFCNFIHRKNPSEEL 174
Query: 181 RRRL------FGRSRRRRSRSRSRSRSPHKYR 206
R L + + R R RS SRS SP R
Sbjct: 175 DRELQLSTKKWLKMRGRDERSVSRSPSPEPAR 206
>gi|354484665|ref|XP_003504507.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like [Cricetulus
griseus]
Length = 238
Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 101/172 (58%), Positives = 130/172 (75%), Gaps = 1/172 (0%)
Query: 15 RVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKI 74
RVNC FYFKIGACRHGDRCSRLH KP+ S T+ L N+Y+ P + D A+ ++
Sbjct: 14 RVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSADGLRCAVSDVEM 73
Query: 75 QDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRF 133
Q+H+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR EE A A+ +LN R+
Sbjct: 74 QEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRW 133
Query: 134 YAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLF 185
+ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISRELRR L+
Sbjct: 134 FNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 185
>gi|226470094|emb|CAX70328.1| Splicing factor U2AF 35 kDa subunit [Schistosoma japonicum]
gi|226486850|emb|CAX74502.1| Splicing factor U2AF 35 kDa subunit [Schistosoma japonicum]
gi|226486852|emb|CAX74503.1| Splicing factor U2AF 35 kDa subunit [Schistosoma japonicum]
gi|226489605|emb|CAX74953.1| Splicing factor U2AF 35 kDa subunit [Schistosoma japonicum]
gi|226489607|emb|CAX74954.1| Splicing factor U2AF 35 kDa subunit [Schistosoma japonicum]
Length = 221
Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 110/188 (58%), Positives = 135/188 (71%), Gaps = 5/188 (2%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHG++CSRLH KPS T+LL N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGEQCSRLHNKPSFGQTILLQNLYIAPQNTAQ 60
Query: 61 GVDPQGQALDPRKIQDH---FEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFR 117
D G ++ ++Q E F E E KYGEIE +N+CDNL DH+VGNVY++FR
Sbjct: 61 SAD--GSHINLTEVQAQQIFDEFFEEVFVECEEKYGEIEEMNVCDNLGDHLVGNVYIKFR 118
Query: 118 EEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIS 177
EE A A+++LN R++ GRP+ + SPVTDFREA CRQYE C RGG+CNFMHLK IS
Sbjct: 119 REEDAEKAVQDLNERWFGGRPVHAELSPVTDFREACCRQYELGECTRGGFCNFMHLKPIS 178
Query: 178 RELRRRLF 185
REL R+L+
Sbjct: 179 RELCRKLY 186
>gi|256088283|ref|XP_002580274.1| U2 snRNP auxiliary factor small subunit [Schistosoma mansoni]
gi|108861853|gb|ABG21828.1| U2 snRNP auxiliary factor small subunit-like protein [Schistosoma
mansoni]
gi|360043806|emb|CCD81352.1| putative u2 snRNP auxiliary factor, small subunit [Schistosoma
mansoni]
Length = 221
Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 110/188 (58%), Positives = 135/188 (71%), Gaps = 5/188 (2%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHG++CSRLH KPS T+LL N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGEQCSRLHNKPSFGQTILLQNLYIAPQNTAQ 60
Query: 61 GVDPQGQALDPRKIQDH---FEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFR 117
D G ++ ++Q E F E E KYGEIE +N+CDNL DH+VGNVY++FR
Sbjct: 61 SAD--GSHINLTEVQAQQIFDEFFEEVFVECEEKYGEIEEMNVCDNLGDHLVGNVYIKFR 118
Query: 118 EEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIS 177
EE A A+++LN R++ GRP+ + SPVTDFREA CRQYE C RGG+CNFMHLK IS
Sbjct: 119 REEDAEKAVQDLNERWFGGRPVHAELSPVTDFREACCRQYELGECTRGGFCNFMHLKPIS 178
Query: 178 RELRRRLF 185
REL R+L+
Sbjct: 179 RELCRKLY 186
>gi|213401493|ref|XP_002171519.1| splicing factor U2AF subunit [Schizosaccharomyces japonicus yFS275]
gi|211999566|gb|EEB05226.1| splicing factor U2AF subunit [Schizosaccharomyces japonicus yFS275]
Length = 205
Score = 221 bits (562), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 99/190 (52%), Positives = 136/190 (71%), Gaps = 5/190 (2%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA HLA+I+GTE+D+VNC FY+KIGACRHG+RCSR H KP+ S T+L N+Y+ P
Sbjct: 1 MASHLANIYGTEQDKVNCSFYYKIGACRHGERCSRKHVKPNYSQTVLCPNLYKNPIH--- 57
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
+ G+ + ++ + F+ FYED+F E +KYGE+E + +CDN+ DH++GNVYV+F+ EE
Sbjct: 58 --EDSGKHMSQAELDEQFDAFYEDMFCEFAKYGEVEQIVVCDNIGDHLIGNVYVRFKYEE 115
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A NA+ +LN R+Y+ +P+ + SPVTDFREA CRQ+E + C RGG CNFMH KK S L
Sbjct: 116 SAQNAIDDLNSRWYSQKPVYAELSPVTDFREACCRQHETSECGRGGLCNFMHAKKPSPHL 175
Query: 181 RRRLFGRSRR 190
R L R+
Sbjct: 176 IRELMAAQRK 185
>gi|406862517|gb|EKD15567.1| splicing factor U2AF 35 kDa subunit [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 209
Score = 221 bits (562), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 113/215 (52%), Positives = 142/215 (66%), Gaps = 12/215 (5%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA +LASIFGTE D+VNC FY+KIGACRHGDRCSR H KPS S T+LL N+YQ P
Sbjct: 1 MANYLASIFGTEADKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQ-----NP 55
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
DP+ + ++ ++Q+HF+ FYED + E+ K+GEIE + +CDN DH++GNVY +F+ E+
Sbjct: 56 AYDPKNK-MNASQLQNHFDAFYEDFWCEMCKFGEIEEVVVCDNNNDHLIGNVYARFKYED 114
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A LN R+YA RPI + SPVTDFREA CR C RGG+CNF+H K S EL
Sbjct: 115 SAQKASDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSPEL 174
Query: 181 RRRL------FGRSRRRRSRSRSRSRSPHKYRGGY 209
R + + R R R RS SRS SP R Y
Sbjct: 175 DREIELSTKKWLRLRGRDERSASRSPSPEPTRKRY 209
>gi|154279620|ref|XP_001540623.1| splicing factor U2AF 35 kDa subunit [Ajellomyces capsulatus NAm1]
gi|150412566|gb|EDN07953.1| splicing factor U2AF 35 kDa subunit [Ajellomyces capsulatus NAm1]
Length = 270
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 112/215 (52%), Positives = 144/215 (66%), Gaps = 12/215 (5%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA +LASIFGTE+D+VNC FY+KIGACRHGDRCSR H KPS S T+LL N+YQ P
Sbjct: 62 MANYLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQ-----NP 116
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
D + + ++P ++Q+HF+ FYED + E+ KYGE+E + +CDN DH++GNVY +F+ E+
Sbjct: 117 AYDTKNK-MNPSQLQNHFDAFYEDFWCEMCKYGELEEVVVCDNNNDHLIGNVYARFKYED 175
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A LN R+YA RPI + SPVTDFREA CR C RGG+CNF+H K+ S EL
Sbjct: 176 SAQQACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSPEL 235
Query: 181 RRRL------FGRSRRRRSRSRSRSRSPHKYRGGY 209
R L + + R R RS +RS SP R Y
Sbjct: 236 ERELELSTKKWLKMRGRDERSVTRSPSPEPTRRRY 270
>gi|431918574|gb|ELK17792.1| Splicing factor U2AF 26 kDa subunit [Pteropus alecto]
Length = 223
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 101/185 (54%), Positives = 135/185 (72%), Gaps = 1/185 (0%)
Query: 16 VNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKIQ 75
VNC FYFKIGACRHGDRCSRLH KP+ S T++L N+Y+ P D + ++Q
Sbjct: 19 VNCSFYFKIGACRHGDRCSRLHNKPTFSQTVVLLNLYRNPQNTAQTADGSHCHVSDVEVQ 78
Query: 76 DHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFY 134
+H+++F+E++F EL KYGEIE +N+CDNL DH+VGNVYV+FR EE A A+ LN R++
Sbjct: 79 EHYDNFFEEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAVAELNNRWF 138
Query: 135 AGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRRRRSR 194
G+ + + SPVTDFRE+ CRQYE C RGG+CNFMHL+ ISR LRR+L+G+ + RS
Sbjct: 139 NGQAVHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISRNLRRQLYGQGPKHRSP 198
Query: 195 SRSRS 199
RS++
Sbjct: 199 PRSQT 203
>gi|224011894|ref|XP_002294600.1| U2 SnRNP auxillary factor, splicing factor [Thalassiosira
pseudonana CCMP1335]
gi|220969620|gb|EED87960.1| U2 SnRNP auxillary factor, splicing factor [Thalassiosira
pseudonana CCMP1335]
Length = 197
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 103/190 (54%), Positives = 137/190 (72%), Gaps = 6/190 (3%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRP----- 55
MA LA I GTE+D+VNCPFYFKIGACRH DRCSR+H +P+ SPT+L+ ++Y+ P
Sbjct: 1 MARRLAQIHGTEEDKVNCPFYFKIGACRHADRCSRIHHRPAFSPTILIKHIYRHPLREAE 60
Query: 56 -DMITPGVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYV 114
+ G G +D + ++ F F+ED FEELSK+G +E+L+ICDNL DHMVG+VY
Sbjct: 61 LKAASEGRAVDGIEVDEAEAREDFLVFFEDFFEELSKFGRLEALHICDNLGDHMVGHVYA 120
Query: 115 QFREEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLK 174
+F +EE AA+AL +NGRFY GR + V+FSPVTDFREA CR ++E C RGG+CNF+H+K
Sbjct: 121 KFSDEEEAADALNVMNGRFYDGRKMEVEFSPVTDFREARCRDFDEETCRRGGFCNFLHIK 180
Query: 175 KISRELRRRL 184
+ L R +
Sbjct: 181 PVPMCLIRDM 190
>gi|393217218|gb|EJD02707.1| RNA-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 231
Score = 220 bits (561), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 120/250 (48%), Positives = 153/250 (61%), Gaps = 34/250 (13%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA HLA+IFGTE+DRVNC FY+KIGACRHGDRCSR H +P S T+LL N+Y P
Sbjct: 1 MASHLANIFGTEQDRVNCSFYYKIGACRHGDRCSRKHIRPPFSQTILLPNVYH-----NP 55
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
DP + L + +Q+ F+ YEDL+ EL+K+G + L++CDN+ DH++GNVY ++ E
Sbjct: 56 AHDPVCK-LTEKDLQEGFDAVYEDLYCELAKFGHLLELHVCDNVGDHLIGNVYARYEWEA 114
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A+ NLN R+YAGRP+ + SPVTDFREA CRQ E CNRGG+CNFMHL+ S+EL
Sbjct: 115 EAQAAVDNLNDRWYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHLRLASKEL 174
Query: 181 RRRLFGRSRRRRSRSRSRSRSPHK---YRGGYEERSHGGGRGSGRRDDDRDHRLHGRGRR 237
L R + R +P K GG+E GGRG
Sbjct: 175 VDSL------RNGQKLERKLNPQKSIGGGGGWEPGKREGGRG------------------ 210
Query: 238 PRSRSPGRRG 247
RS SPGR+G
Sbjct: 211 -RSASPGRKG 219
>gi|443897457|dbj|GAC74797.1| U2 snRNP splicing factor, small subunit, and related proteins
[Pseudozyma antarctica T-34]
Length = 271
Score = 220 bits (561), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 99/184 (53%), Positives = 135/184 (73%), Gaps = 5/184 (2%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA +LASI+GTE+D+VNC FY+KIGACRHGDRCSR H +P S TLLLSN+Y+ P
Sbjct: 1 MASYLASIYGTEQDKVNCSFYYKIGACRHGDRCSRKHIRPPYSCTLLLSNVYRNPRH--- 57
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
Q A+ ++Q F++FYED+F EL+KYGE++ +++CDN+ DH++GNVY +++ E
Sbjct: 58 --HEQDCAITDAELQAQFDEFYEDMFCELAKYGELQEMHVCDNVGDHLIGNVYARYKYEA 115
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A+ LN R+Y +P+ + SPVTDF+EA CRQ E N CNRGG+CNFMHL+ S L
Sbjct: 116 DAQLAVDALNDRWYDAKPLFAELSPVTDFQEACCRQNETNECNRGGFCNFMHLRYASAPL 175
Query: 181 RRRL 184
R++L
Sbjct: 176 RKQL 179
>gi|440895568|gb|ELR47720.1| Splicing factor U2AF 35 kDa subunit, partial [Bos grunniens mutus]
Length = 223
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 101/172 (58%), Positives = 130/172 (75%), Gaps = 1/172 (0%)
Query: 15 RVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKI 74
RVNC FYFKIGACRHGDRCSRLH KP+ S T+ L N+Y+ P + D A+ ++
Sbjct: 1 RVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSADGLRCAVSDVEM 60
Query: 75 QDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRF 133
Q+H+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR EE A A+ +LN R+
Sbjct: 61 QEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRW 120
Query: 134 YAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLF 185
+ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISRELRR L+
Sbjct: 121 FNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 172
>gi|431901449|gb|ELK08471.1| Splicing factor U2AF 35 kDa subunit, partial [Pteropus alecto]
Length = 226
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 101/172 (58%), Positives = 130/172 (75%), Gaps = 1/172 (0%)
Query: 15 RVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKI 74
RVNC FYFKIGACRHGDRCSRLH KP+ S T+ L N+Y+ P + D A+ ++
Sbjct: 1 RVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSADGLRCAVSDVEM 60
Query: 75 QDHFEDFYEDLFEEL-SKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRF 133
Q+H+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR EE A A+ +LN R+
Sbjct: 61 QEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRW 120
Query: 134 YAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLF 185
+ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISRELRR L+
Sbjct: 121 FNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 172
>gi|339238205|ref|XP_003380657.1| conserved hypothetical protein [Trichinella spiralis]
gi|316976430|gb|EFV59727.1| conserved hypothetical protein [Trichinella spiralis]
Length = 254
Score = 220 bits (560), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 104/203 (51%), Positives = 137/203 (67%), Gaps = 26/203 (12%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMIT- 59
MAE+LASIFGTEKD+VNC FYFKIGACRHGD+CSR+H +P+ S T+LL N+YQ P M
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDKCSRIHNRPTFSQTILLQNLYQNPKMDIH 60
Query: 60 ------------------PGVDPQGQ------ALDPRKIQDHFEDFYEDLFEELS-KYGE 94
P G+ + Q HF++F+E++F+E+ KYGE
Sbjct: 61 RAEAALFCCQFGRDVIGRPSTGALGELWWVMVGVTDSHEQQHFDEFFEEIFDEVEDKYGE 120
Query: 95 IESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATC 154
IE +N+CDN+ +HM+GNVY++F+ EE A A+++LN R++ G PI + SPVTDFREA C
Sbjct: 121 IEEMNVCDNIGEHMIGNVYIKFKREEDAERAVKDLNTRWFGGMPIYAELSPVTDFREACC 180
Query: 155 RQYEENVCNRGGYCNFMHLKKIS 177
RQYE C +GG+CNFMHLK IS
Sbjct: 181 RQYEMGDCGKGGFCNFMHLKPIS 203
>gi|345323475|ref|XP_001511817.2| PREDICTED: hypothetical protein LOC100080963 [Ornithorhynchus
anatinus]
Length = 350
Score = 220 bits (560), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 100/172 (58%), Positives = 130/172 (75%), Gaps = 1/172 (0%)
Query: 15 RVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKI 74
+VNC FYFKIGACRHGDRCSRLH KP+ S T+ L N+Y+ P + D A+ ++
Sbjct: 117 KVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSADGLRCAVSDVEM 176
Query: 75 QDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRF 133
Q+H+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR EE A A+ +LN R+
Sbjct: 177 QEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRW 236
Query: 134 YAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLF 185
+ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISRELRR L+
Sbjct: 237 FNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 288
>gi|351700683|gb|EHB03602.1| Splicing factor U2AF 35 kDa subunit [Heterocephalus glaber]
Length = 387
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 101/175 (57%), Positives = 131/175 (74%), Gaps = 1/175 (0%)
Query: 12 EKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDP 71
E+ VNC FYFKIGACRHGDRCSRLH KP+ S T+ L N+Y+ P + D A+
Sbjct: 172 EEMLVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSADGLRCAVSD 231
Query: 72 RKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLN 130
++Q+H+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR EE A A+ +LN
Sbjct: 232 VEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLN 291
Query: 131 GRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLF 185
R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISRELRR L+
Sbjct: 292 NRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 346
>gi|426378574|ref|XP_004055992.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like, partial
[Gorilla gorilla gorilla]
Length = 193
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 110/196 (56%), Positives = 140/196 (71%), Gaps = 4/196 (2%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+ ASIFGTEK VNC F FKIGAC HGDRCS LH KP+ S T+ L N+Y P +
Sbjct: 1 MAEYPASIFGTEK--VNCSFDFKIGACLHGDRCSWLHHKPTFSQTIALLNIYCNPQNASQ 58
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEEL-SKYGEIESLNICDNLADHMVGNVYVQFREE 119
D A+ ++Q+H+++F+E++F EL KYGE+E +N+CDNL DH+VGNVY + E
Sbjct: 59 SADGLRCAVSDVEMQEHYDEFFEEVFIELGEKYGEVEEMNVCDNLGDHLVGNVYFKLPRE 118
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
E A A+ +LN R++ G+PI + SPVTDFR A CRQYE C RGG+CNFMHLK ISRE
Sbjct: 119 EDAEKAVIDLNNRWFNGQPIHAELSPVTDFRGACCRQYEMGECTRGGFCNFMHLKPISRE 178
Query: 180 LRRRLFGRSRRRRSRS 195
LRR L G+ RR++ RS
Sbjct: 179 LRRELCGQ-RRKKHRS 193
>gi|85000529|ref|XP_954983.1| U2 snRNP auxiliary factor [Theileria annulata strain Ankara]
gi|65303129|emb|CAI75507.1| U2 snRNP auxiliary factor, putative [Theileria annulata]
Length = 236
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 130/283 (45%), Positives = 170/283 (60%), Gaps = 55/283 (19%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDM--- 57
MAEHLA I GTE+DRVNCPF++KIGACRHGD+CSR H KPS + TL++ +MYQ P +
Sbjct: 1 MAEHLARIIGTEEDRVNCPFFWKIGACRHGDQCSRTHYKPSAAQTLVIRHMYQNPPVAIA 60
Query: 58 ITPGVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFR 117
I G + LD K DHFE+F+E++F EL KYGEIE + +CDN+ DH++GNVY+++
Sbjct: 61 IAEGQMISDELLD--KAADHFEEFFEEVFLELMKYGEIEDMVVCDNIGDHIIGNVYIKYS 118
Query: 118 EEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIS 177
+E A A+ +L+GR+Y GRPI +++PVTDFREA CRQ+ E C RGGYCNFMH+K +
Sbjct: 119 DESAACRAVTSLSGRYYGGRPIQCEYTPVTDFREARCRQFVEGQCRRGGYCNFMHIKHVP 178
Query: 178 RELRRRLFGRSRRRRSRSRSRSRSPHKYRGGYEERSHGGGRGSGRRDDDRDHRLHGRGRR 237
R LRR+L R Y+E
Sbjct: 179 RSLRRKLMTRM--------------------YQEFPEY---------------------- 196
Query: 238 PRSRSPGRRGGRSRSPGARRRSPVRESSVERRAKIEQWNREKE 280
+ R P R G SP R+ R++S ERR IEQWNRE+E
Sbjct: 197 -KKRIPYHRSG---SPYKRK----RQTSEERRDMIEQWNRERE 231
>gi|395752868|ref|XP_002830790.2| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 2, partial
[Pongo abelii]
Length = 323
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 100/171 (58%), Positives = 129/171 (75%), Gaps = 1/171 (0%)
Query: 16 VNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKIQ 75
VNC FYFKIGACRHGDRCSRLH KP+ S T+ L N+Y+ P + D A+ ++Q
Sbjct: 99 VNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSADGLRCAVSDVEMQ 158
Query: 76 DHFEDFYEDLFEEL-SKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFY 134
+H+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR EE A A+ +LN R++
Sbjct: 159 EHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRWF 218
Query: 135 AGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLF 185
G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISRELRR L+
Sbjct: 219 NGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 269
>gi|295661444|ref|XP_002791277.1| splicing factor U2AF 23 kDa subunit [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226280839|gb|EEH36405.1| splicing factor U2AF 23 kDa subunit [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226292865|gb|EEH48285.1| splicing factor U2AF 23 kDa subunit [Paracoccidioides brasiliensis
Pb18]
Length = 209
Score = 218 bits (555), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 109/212 (51%), Positives = 140/212 (66%), Gaps = 12/212 (5%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA +LASIFGTE+D+VNC FY+KIGACRHGDRCSR H KPS S T+LL N+YQ P T
Sbjct: 1 MANYLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQNPAYDTK 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
++ ++Q+HF+ FYED + E+ KYGE+E + +CDN DH++GNVY +F+ E+
Sbjct: 61 N------KMNASQLQNHFDAFYEDFWCEMCKYGELEEVVVCDNNNDHLIGNVYARFKYED 114
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A LN R+YA RPI + SPVTDFREA CR C RGG+CNF+H K+ S EL
Sbjct: 115 SAQQACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSPEL 174
Query: 181 RRRL------FGRSRRRRSRSRSRSRSPHKYR 206
+ L + + R R RS +RS SP R
Sbjct: 175 EKELELSTKKWLKMRGRDERSVTRSPSPEPTR 206
>gi|392578781|gb|EIW71908.1| hypothetical protein TREMEDRAFT_58042 [Tremella mesenterica DSM
1558]
Length = 228
Score = 218 bits (555), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 100/195 (51%), Positives = 132/195 (67%), Gaps = 5/195 (2%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA HLA+IFGTE+DRVNC FY KIGACRHGDRCSR H KP S T+LL N+Y P
Sbjct: 1 MASHLANIFGTEQDRVNCSFYLKIGACRHGDRCSRKHIKPQFSSTILLPNVYN-----NP 55
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
P+GQ + P ++Q +F++FYED F EL KYG ++ +++CDN+ DH++GNVY ++ E
Sbjct: 56 AHTPEGQNMTPEQLQQNFDNFYEDFFIELCKYGNLQEMHVCDNVGDHLMGNVYARYEYET 115
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A+ A LN ++YA +P++ + SPV+DFREA CRQ E C R G+CNFMHL S+ L
Sbjct: 116 EASKACDALNDKWYAMKPLMAELSPVSDFREACCRQNEMGECVREGFCNFMHLCHPSKSL 175
Query: 181 RRRLFGRSRRRRSRS 195
L R R R+
Sbjct: 176 VSSLQASQRLSRRRN 190
>gi|58271046|ref|XP_572679.1| splicing factor [Cryptococcus neoformans var. neoformans JEC21]
gi|134114768|ref|XP_773682.1| hypothetical protein CNBH1370 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256310|gb|EAL19035.1| hypothetical protein CNBH1370 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57228938|gb|AAW45372.1| splicing factor, putative [Cryptococcus neoformans var. neoformans
JEC21]
Length = 223
Score = 218 bits (554), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 104/195 (53%), Positives = 131/195 (67%), Gaps = 5/195 (2%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA HLA+IFGTE+DRVNC FY KIGACRHGDRCSR H KP S T+LL N+Y P
Sbjct: 1 MASHLANIFGTEQDRVNCSFYLKIGACRHGDRCSRKHIKPQFSQTILLPNVYN-----NP 55
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
G P+GQ + ++Q F+ FYED F EL+KYG ++ + +CDN+ DH++GNVY +F E
Sbjct: 56 GHTPEGQNMSAEELQADFDRFYEDFFIELAKYGNLQEMIVCDNVGDHLLGNVYARFEYEA 115
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
AA A++ LN R+YA RP+ + SPVTDFRE+ CRQ E C R G+CNFMHL +R L
Sbjct: 116 EAARAVQALNDRWYAMRPLHAELSPVTDFRESCCRQNELGECKREGFCNFMHLCHPTRSL 175
Query: 181 RRRLFGRSRRRRSRS 195
L R R R+
Sbjct: 176 VSALQASQRVSRRRA 190
>gi|321262008|ref|XP_003195723.1| U2 snRNP auxiliary factor small subunit [Cryptococcus gattii WM276]
gi|317462197|gb|ADV23936.1| U2 snRNP auxiliary factor small subunit, putative [Cryptococcus
gattii WM276]
Length = 223
Score = 218 bits (554), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 110/220 (50%), Positives = 142/220 (64%), Gaps = 8/220 (3%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA HLA+IFGTE+DRVNC FY KIGACRHGDRCSR H KP S T+LL N+Y P
Sbjct: 1 MASHLANIFGTEQDRVNCSFYLKIGACRHGDRCSRKHIKPQFSQTILLPNVYN-----NP 55
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
G P+GQ + ++Q F+ FYED F EL+KYG ++ + +CDN+ DH++GNVY +F E
Sbjct: 56 GHTPEGQNMSAEELQADFDRFYEDFFIELAKYGNLQEMIVCDNVGDHLLGNVYARFEYEA 115
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
AA A++ LN R+YA RP+ + SPVTDFRE+ CRQ E C R G+CNFMHL +R L
Sbjct: 116 EAARAVQALNDRWYAMRPLHAELSPVTDFRESCCRQNELGECKREGFCNFMHLCHPTRSL 175
Query: 181 RRRLFGRSRRRRSRSRSRSRSPHKYRG-GYEERSHGGGRG 219
L ++ +R SR R+ + G G+ GG G
Sbjct: 176 VSAL--QASQRVSRRRAHKGAEVDSGGMGWTPAVAAGGEG 213
>gi|294936347|ref|XP_002781727.1| U2 small nuclear ribonucleoprotein, auxiliary factor, small
subunit, putative [Perkinsus marinus ATCC 50983]
gi|239892649|gb|EER13522.1| U2 small nuclear ribonucleoprotein, auxiliary factor, small
subunit, putative [Perkinsus marinus ATCC 50983]
Length = 278
Score = 218 bits (554), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 102/179 (56%), Positives = 129/179 (72%), Gaps = 5/179 (2%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDM--- 57
MAEHLA IFGTE+DRVNCPFYFKIG CRHGD+CSR H +P S T+LL MYQ P
Sbjct: 1 MAEHLARIFGTEEDRVNCPFYFKIGTCRHGDQCSRQHNRPVSSQTVLLKGMYQNPPAAIA 60
Query: 58 ITPGVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFR 117
+ G D + D Q+HFE FYE++F EL+ YGEIE L + DN+ DHM+GNVYV++
Sbjct: 61 LAEGQDIPDEQADAA--QEHFEAFYEEVFLELANYGEIEDLAVVDNIGDHMIGNVYVKYV 118
Query: 118 EEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKI 176
+EE A ++ L GRFYAGR I ++SPVTDF EA CRQ+++ C+RGG+CNF+H K +
Sbjct: 119 KEESAEMCIQKLTGRFYAGRIIQPEYSPVTDFSEARCRQFDDAQCSRGGFCNFIHWKHV 177
>gi|405122366|gb|AFR97133.1| splicing factor [Cryptococcus neoformans var. grubii H99]
Length = 223
Score = 218 bits (554), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 104/195 (53%), Positives = 131/195 (67%), Gaps = 5/195 (2%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA HLA+IFGTE+DRVNC FY KIGACRHGDRCSR H KP S T+LL N+Y P
Sbjct: 1 MASHLANIFGTEQDRVNCSFYLKIGACRHGDRCSRKHIKPQFSQTILLPNVYN-----NP 55
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
G P+GQ + ++Q F+ FYED F EL+KYG ++ + +CDN+ DH++GNVY +F E
Sbjct: 56 GHTPEGQNMSAEELQADFDRFYEDFFIELAKYGNLQEMIVCDNVGDHLLGNVYARFEYEA 115
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
AA A++ LN R+YA RP+ + SPVTDFRE+ CRQ E C R G+CNFMHL +R L
Sbjct: 116 EAARAVQALNDRWYAMRPLHAELSPVTDFRESCCRQNELGECKREGFCNFMHLCHPTRSL 175
Query: 181 RRRLFGRSRRRRSRS 195
L R R R+
Sbjct: 176 VSALQASQRVSRRRA 190
>gi|294877742|ref|XP_002768104.1| U2 small nuclear ribonucleoprotein, auxiliary factor, small
subunit, putative [Perkinsus marinus ATCC 50983]
gi|239870301|gb|EER00822.1| U2 small nuclear ribonucleoprotein, auxiliary factor, small
subunit, putative [Perkinsus marinus ATCC 50983]
Length = 273
Score = 217 bits (552), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 101/179 (56%), Positives = 129/179 (72%), Gaps = 5/179 (2%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDM--- 57
MAEHLA IFGTE+DRVNCPFYFKIG CRHGD+CSR H +P S T+LL MYQ P
Sbjct: 1 MAEHLARIFGTEEDRVNCPFYFKIGTCRHGDQCSRQHNRPVSSQTVLLKGMYQNPPAAIA 60
Query: 58 ITPGVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFR 117
+ G D + D Q+HFE FYE++F EL+ YGEIE L + DN+ DHM+GNVYV++
Sbjct: 61 LAEGQDVADEQADAA--QEHFEAFYEEVFLELANYGEIEDLAVVDNIGDHMIGNVYVKYV 118
Query: 118 EEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKI 176
+EE + ++ L GRFYAGR I ++SPVTDF EA CRQ+++ C+RGG+CNF+H K +
Sbjct: 119 KEESSEMCIQKLTGRFYAGRIIQPEYSPVTDFSEARCRQFDDAQCSRGGFCNFIHWKHV 177
>gi|76156406|gb|AAX27612.2| SJCHGC07381 protein [Schistosoma japonicum]
Length = 219
Score = 216 bits (551), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 108/186 (58%), Positives = 133/186 (71%), Gaps = 5/186 (2%)
Query: 3 EHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGV 62
E+LASIFGTEKD+VNC FYFKIGACRHG++CSRLH KPS T+LL N+Y P
Sbjct: 1 EYLASIFGTEKDKVNCSFYFKIGACRHGEQCSRLHNKPSFGQTILLQNLYIAPQNTAQSA 60
Query: 63 DPQGQALDPRKIQDH---FEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREE 119
D G ++ ++Q E F E E KYGEIE +N+CDNL DH+VGNVY++FR E
Sbjct: 61 D--GSHINLTEVQAQQIFDEFFEEVFVECEEKYGEIEEMNVCDNLGDHLVGNVYIKFRRE 118
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
E A A+++LN R++ GRP+ + SPVTDFREA CRQYE C RGG+CNFMHLK ISRE
Sbjct: 119 EDAEKAVQDLNERWFGGRPVHAELSPVTDFREACCRQYELGECTRGGFCNFMHLKPISRE 178
Query: 180 LRRRLF 185
L R+L+
Sbjct: 179 LCRKLY 184
>gi|409080647|gb|EKM81007.1| hypothetical protein AGABI1DRAFT_71717 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426197561|gb|EKV47488.1| hypothetical protein AGABI2DRAFT_221673 [Agaricus bisporus var.
bisporus H97]
Length = 227
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 105/208 (50%), Positives = 141/208 (67%), Gaps = 12/208 (5%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA HLA+IFGTE+DRVNC FY+KIGACRHGDRCSR H KP S T+LL N+Y P
Sbjct: 1 MASHLANIFGTEQDRVNCSFYYKIGACRHGDRCSRKHIKPPFSQTILLPNVYH-----NP 55
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
DP + L +++Q+ F+ YEDL+ EL+K+G + L++CDN+ DH++GNVY ++ E
Sbjct: 56 AHDPICK-LTEKELQEGFDAVYEDLYCELAKFGHLLELHVCDNVGDHLIGNVYARYEWET 114
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A+ + N R+YAGRP+ + SPVTDFREA CRQ E CNRGG+CNFMHL+ S +L
Sbjct: 115 EAQAAVDSCNERWYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHLRNASPDL 174
Query: 181 RRRLFGRSRRRRSRSRSRSRSPHKYRGG 208
++L R + R P +++GG
Sbjct: 175 VKQL------RHGQRLERKLHPPQHQGG 196
>gi|403169415|ref|XP_003328862.2| hypothetical protein PGTG_10163 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375167949|gb|EFP84443.2| hypothetical protein PGTG_10163 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 278
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 99/192 (51%), Positives = 133/192 (69%), Gaps = 6/192 (3%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA HL++I+G+E+D+VNC FY KIGACRHG+RCSR H KP+ S TL+++NMYQ P
Sbjct: 1 MASHLSNIYGSEQDKVNCSFYLKIGACRHGERCSRKHIKPTFSQTLVIANMYQ-----NP 55
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
DP + L ++ +FE FYED+F EL KYG + +++CDN+ DH++GNVY ++ E+
Sbjct: 56 AHDPNCK-LSEAELTSYFETFYEDVFCELVKYGNLLEMHVCDNVGDHLIGNVYARYDWED 114
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A+ N R+YAGRP+ + SPVTDFREA CRQ + CNRGG+CNFMHLK+ L
Sbjct: 115 EAQIAVDAFNQRWYAGRPLFAELSPVTDFREACCRQNDMGECNRGGFCNFMHLKEPRSSL 174
Query: 181 RRRLFGRSRRRR 192
R L + R R
Sbjct: 175 VRELHAQQRVER 186
>gi|225680499|gb|EEH18783.1| splicing factor U2af 38 kDa subunit [Paracoccidioides brasiliensis
Pb03]
Length = 209
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 108/212 (50%), Positives = 139/212 (65%), Gaps = 12/212 (5%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA +LASIFGTE+D+VNC FY+KIGACRHGDRCSR H KPS S T+LL N+YQ P T
Sbjct: 1 MANYLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQNPAYDTK 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
++ ++Q+HF+ FYED + E+ KYGE+E + +CDN DH++GNVY +F+ E+
Sbjct: 61 N------KMNASQLQNHFDAFYEDFWCEMCKYGELEEVVVCDNNNDHLIGNVYARFKYED 114
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A LN R+YA RPI + SPVTDFREA CR C RGG+CNF+H K+ S EL
Sbjct: 115 SAQQGCDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSPEL 174
Query: 181 RRRL------FGRSRRRRSRSRSRSRSPHKYR 206
+ L + + R R RS +RS SP R
Sbjct: 175 EKELELSTKKWLKMRGRDERSVTRSPSPEPTR 206
>gi|444511515|gb|ELV09911.1| Splicing factor U2AF 35 kDa subunit [Tupaia chinensis]
Length = 218
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 99/181 (54%), Positives = 131/181 (72%), Gaps = 1/181 (0%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE LASIF TEKD+VNC YFK+GACRHGDRCS LH KP+ S T++L N+Y+ +P
Sbjct: 1 MAESLASIFSTEKDKVNCSSYFKLGACRHGDRCSGLHNKPTFSQTIVLLNIYRNLHNSSP 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREE 119
A+ ++Q H+++F++++F E+ KYGE+E +N+CDN DH+ GNVYV+FR E
Sbjct: 61 SAGGLHGAVSDAEMQQHYDEFFKEVFTEMEEKYGEVEEMNVCDNAGDHLAGNVYVKFRRE 120
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
E A A+ +LN R++ +PI + SPVTDFREA CRQYE C +GG+CN MHLK ISRE
Sbjct: 121 EDAEKAVMDLNNRWFNRQPIRAELSPVTDFREACCRQYEMGECTQGGFCNLMHLKPISRE 180
Query: 180 L 180
L
Sbjct: 181 L 181
>gi|328861623|gb|EGG10726.1| hypothetical protein MELLADRAFT_42160 [Melampsora larici-populina
98AG31]
Length = 244
Score = 214 bits (546), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 105/235 (44%), Positives = 147/235 (62%), Gaps = 11/235 (4%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA HL++I+G+E+D+VNC FY KIGACRHG+RCSR H KP+ S T +++NMYQ P
Sbjct: 1 MASHLSNIYGSEQDKVNCSFYLKIGACRHGERCSRKHIKPTFSQTFVIANMYQ-----NP 55
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
DP + L ++ +FE FYED+F EL KYG + +++CDN+ DH++GNVY ++ E+
Sbjct: 56 AHDPNCK-LSEAELASYFETFYEDVFCELVKYGNLLEMHVCDNVGDHLIGNVYARYEWED 114
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A+ N R+YAGRP+ + SPVTDFREA CRQ + CNRGG+CNFMHLK+ L
Sbjct: 115 EAQIAVDAFNQRWYAGRPLFAELSPVTDFREACCRQNDMGECNRGGFCNFMHLKEPRSSL 174
Query: 181 RRRLFGRSRRRR-----SRSRSRSRSPHKYRGGYEERSHGGGRGSGRRDDDRDHR 230
R L + R R +R + R+R ++ + H S + + D R
Sbjct: 175 VRELHAQQRVERKLNPSARDQERAREMAEFGVAPVSKDHAMADPSDQDPEQLDDR 229
>gi|324522962|gb|ADY48164.1| Splicing factor U2AF 26 kDa subunit, partial [Ascaris suum]
Length = 303
Score = 214 bits (545), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 101/196 (51%), Positives = 135/196 (68%), Gaps = 8/196 (4%)
Query: 6 ASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQ 65
+S+F EKDRVNC FYFKIGACRHGD+CSRLH +P+ S T+LL N Y+ G
Sbjct: 10 SSLFTPEKDRVNCSFYFKIGACRHGDKCSRLHIRPTYSQTILLKNFYR-------GAGIH 62
Query: 66 GQALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREEEHAAN 124
+ Q F++FY ++F E+ +YG IE +N+CDN+ +HM+GNVYV+FR E A
Sbjct: 63 SSDTSKEEAQREFDEFYREVFVEIDDEYGRIEEMNVCDNVGEHMLGNVYVKFRHESSAER 122
Query: 125 ALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRL 184
A+ +LN R++ GRPI + SPV DFR+A CRQYE CNRGG+CNFMHLKK+S L+R+L
Sbjct: 123 AVNSLNERWFDGRPIHCELSPVVDFRDACCRQYEIGECNRGGFCNFMHLKKVSSGLKRKL 182
Query: 185 FGRSRRRRSRSRSRSR 200
RS R++ R ++ R
Sbjct: 183 LRRSERQKRRKCTKWR 198
>gi|398408734|ref|XP_003855832.1| hypothetical protein MYCGRDRAFT_51803 [Zymoseptoria tritici IPO323]
gi|339475717|gb|EGP90808.1| hypothetical protein MYCGRDRAFT_51803 [Zymoseptoria tritici IPO323]
Length = 209
Score = 213 bits (543), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 108/212 (50%), Positives = 141/212 (66%), Gaps = 12/212 (5%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA +LASIFGTE+D+VNC FY+KIGACRHGDRCSR H KPS S T+LL N+YQ P
Sbjct: 1 MANYLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILLPNLYQ-----NP 55
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
D + + + P ++Q+HF+ FY+D + E+ K+GE+E + +CDN DH++GNVY +F+ E+
Sbjct: 56 AYDNKSR-MTPSQLQNHFDAFYDDFWCEMCKFGELEEVVVCDNNNDHLIGNVYARFKYED 114
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A LN R+YA RPI + SPVTDFREA CR C RGG+CNF+H K+ S +L
Sbjct: 115 AAQKACDELNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSPDL 174
Query: 181 RRRL------FGRSRRRRSRSRSRSRSPHKYR 206
+ L R R R RS +RS SP R
Sbjct: 175 EKELELATKKHLRIRGRDERSVTRSPSPEPTR 206
>gi|198430519|ref|XP_002128159.1| PREDICTED: zinc finger (C-x8-C-x5-C-x3-H)-16 [Ciona intestinalis]
Length = 187
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 113/215 (52%), Positives = 139/215 (64%), Gaps = 33/215 (15%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHG+RCSRLH KP+ S T+ N ++ +
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGERCSRLHNKPTFSQTIHYDNFFEEVFV--- 57
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
E KYG IE +N+CDNL DH+VGNVY++F +EE
Sbjct: 58 --------------------------ELEEKYGSIEEMNVCDNLGDHLVGNVYIKFHKEE 91
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A+ +LN R++ G+PI+ + S VTDFREA CRQYE C RGG+CNFMHLK ISREL
Sbjct: 92 DAEKAVNDLNNRWFNGQPIMSELSTVTDFREACCRQYEMGECTRGGFCNFMHLKPISREL 151
Query: 181 RRRLFGRSRRRRSRSRSRSRSPHKYRGGYEERSHG 215
RRRL+GR +++ RSRS RGG ER HG
Sbjct: 152 RRRLYGRKEKKK---RSRSPPTRNRRGGSRER-HG 182
>gi|358059521|dbj|GAA94678.1| hypothetical protein E5Q_01331 [Mixia osmundae IAM 14324]
Length = 260
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 95/191 (49%), Positives = 136/191 (71%), Gaps = 5/191 (2%)
Query: 2 AEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPG 61
A HLA+I+G+E+D+VNC FY KIGACRHGDRCSR H KP S T+++ NMYQ P+ G
Sbjct: 17 ASHLAAIYGSEQDKVNCSFYLKIGACRHGDRCSRKHIKPHFSQTIVIQNMYQNPNH---G 73
Query: 62 VDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEH 121
+D +++D ++QD F+ F+ED++ EL K+G + +++CDN+ DH++GNVY ++ E+
Sbjct: 74 MDAGAKSVD--QLQDEFDQFFEDVYCELVKFGHLLEMHVCDNVGDHLIGNVYARYDFEDE 131
Query: 122 AANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELR 181
A A+ LN R++AGRP+ + SPVTDFREATCRQ + C+RGG+CNF HL+K L
Sbjct: 132 AQTAIDTLNTRWFAGRPLFAELSPVTDFREATCRQNDLGNCDRGGFCNFHHLRKPRAALV 191
Query: 182 RRLFGRSRRRR 192
+ L + R R
Sbjct: 192 KELDAQQRVER 202
>gi|312088442|ref|XP_003145864.1| hypothetical protein LOAG_10291 [Loa loa]
gi|307758974|gb|EFO18208.1| hypothetical protein LOAG_10291 [Loa loa]
Length = 252
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 105/209 (50%), Positives = 139/209 (66%), Gaps = 2/209 (0%)
Query: 2 AEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPG 61
AE+LASI+GTEKD+VNC FYFKIGACRHGD+CSR H PS S T+LL N+Y P + T
Sbjct: 9 AEYLASIYGTEKDKVNCSFYFKIGACRHGDKCSRTHIMPSFSQTVLLKNLYHNPMIDTRQ 68
Query: 62 VDPQGQA--LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREE 119
D + ++ ++ Q E F E E K+G I+ +N+CDN+ +HM+GNVYV+F E
Sbjct: 69 ADAFAKVGQMNEQEQQYFEEFFEEIFVELEDKFGPIDEMNVCDNIGEHMIGNVYVKFENE 128
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
E A ++ L R++ G P+ + SPVTDFREA CRQYE CN+G +CNFMHLK+ISR+
Sbjct: 129 EDADKCVKGLENRWFNGSPVYAELSPVTDFREACCRQYELGGCNKGAFCNFMHLKQISRD 188
Query: 180 LRRRLFGRSRRRRSRSRSRSRSPHKYRGG 208
LRR+L+G R + H+ RGG
Sbjct: 189 LRRKLYGSRAEYRGGGYYGGGNWHEGRGG 217
>gi|170596198|ref|XP_001902678.1| splicing factor U2AF35 [Brugia malayi]
gi|158589514|gb|EDP28475.1| splicing factor U2AF35, putative [Brugia malayi]
Length = 247
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 105/209 (50%), Positives = 139/209 (66%), Gaps = 2/209 (0%)
Query: 2 AEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPG 61
AE+LASI+GTEKD+VNC FYFKIGACRHGD+CSR H PS S T+LL N+Y P + T
Sbjct: 9 AEYLASIYGTEKDKVNCSFYFKIGACRHGDKCSRTHIMPSFSQTVLLKNLYHNPMIDTRQ 68
Query: 62 VDPQGQA--LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREE 119
D + ++ ++ Q E F E E K+G I+ +N+CDN+ +HM+GNVYV+F E
Sbjct: 69 ADAFAKVGQMNEQEQQYFEEFFEEIFVELEDKFGPIDEMNVCDNIGEHMIGNVYVKFENE 128
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
E A ++ L R++ G P+ + SPVTDFREA CRQYE CN+G +CNFMHLK+ISR+
Sbjct: 129 EDADKCVKGLENRWFNGSPVYAELSPVTDFREACCRQYELGGCNKGAFCNFMHLKQISRD 188
Query: 180 LRRRLFGRSRRRRSRSRSRSRSPHKYRGG 208
LRR+L+G R + H+ RGG
Sbjct: 189 LRRKLYGSRAEYRGGGYYGGGNWHEGRGG 217
>gi|399217872|emb|CCF74759.1| unnamed protein product [Babesia microti strain RI]
Length = 234
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 103/190 (54%), Positives = 144/190 (75%), Gaps = 5/190 (2%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDM--- 57
MAEHLA I GTE+DRVNCPF++KIGACRHG++CSR H +PS + T+++ +MYQ P +
Sbjct: 1 MAEHLARIIGTEEDRVNCPFFWKIGACRHGEQCSRSHYRPSSAQTIVIKHMYQNPPIAIA 60
Query: 58 ITPGVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFR 117
I+ G + D + DHFE+F+E++F EL KYGE+E + +CDN+ DH++GNVYV++
Sbjct: 61 ISEGQMVSDEVYD--QAADHFEEFFEEVFLELCKYGEVEDMIVCDNIGDHIIGNVYVKYS 118
Query: 118 EEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIS 177
+E AANA+ L+GRFY G+ I+V+++PVTDFREA CRQ+ + C RGGYCNFMH+K +
Sbjct: 119 DEMSAANAISTLSGRFYGGKQIMVEYTPVTDFREARCRQFVDGQCKRGGYCNFMHVKHVP 178
Query: 178 RELRRRLFGR 187
R LRR+L +
Sbjct: 179 RSLRRKLMNK 188
>gi|312381446|gb|EFR27193.1| hypothetical protein AND_06248 [Anopheles darlingi]
Length = 372
Score = 211 bits (537), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 96/168 (57%), Positives = 120/168 (71%), Gaps = 3/168 (1%)
Query: 15 RVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQA--LDPR 72
RVNC FYFKIGACRHGDRCSR+H KP+ S T LL N+Y P D +
Sbjct: 132 RVNCSFYFKIGACRHGDRCSRIHNKPTFSQTCLLQNLYVNPQNSAKSADGSHLVANVSDE 191
Query: 73 KIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNG 131
++Q+H+++F+ED+F E KYGEIE +N+CDNL DH+VGNVY++FR EE A A ++LN
Sbjct: 192 EMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAERAAKDLNN 251
Query: 132 RFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
R++ GRP+ + SPVTDFREA CRQYE C R G+CNFMHLK ISRE
Sbjct: 252 RWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRE 299
>gi|238586680|ref|XP_002391246.1| hypothetical protein MPER_09353 [Moniliophthora perniciosa FA553]
gi|215455659|gb|EEB92176.1| hypothetical protein MPER_09353 [Moniliophthora perniciosa FA553]
Length = 249
Score = 211 bits (537), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 119/259 (45%), Positives = 153/259 (59%), Gaps = 34/259 (13%)
Query: 1 MAEHLASI-----FGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRP 55
MA HLASI FGTE+DRVNC FY+KIGA RHGDRCSR H +P S T+LL N+Y
Sbjct: 1 MASHLASIVSANIFGTEQDRVNCSFYYKIGAWRHGDRCSRKHIRPPFSQTILLPNVYH-- 58
Query: 56 DMITPGVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQ 115
P DP + L +++Q+ F+ YEDL+ EL+K+G + L++CDN+ DH++GNVY +
Sbjct: 59 ---NPAHDPVCK-LTEKELQEGFDAVYEDLYCELAKFGHLLELHVCDNVGDHLIGNVYAR 114
Query: 116 FREEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKK 175
+ E A A+ NLN R+YAGRP+ + SPVTDFREA CRQ E CNRGG+CNFMHL+
Sbjct: 115 YEWETEAQTAVDNLNDRWYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHLRL 174
Query: 176 ISRELRRRLFGRSRRRRSRSRSRSRSPHKYRGGYEERSHGGGRGSGRRDDDRDHRLHGRG 235
S+EL L R R R P + GGG R++ R
Sbjct: 175 ASKELVDSL-----RVGQRLERRLHPP---------ATQGGGGWEPRQE---------RW 211
Query: 236 RRPRSRSPGRRGGRSRSPG 254
R+ SP R GG R+ G
Sbjct: 212 RKRAYASPKRGGGPVRTAG 230
>gi|388580357|gb|EIM20672.1| RNA-binding domain-containing protein [Wallemia sebi CBS 633.66]
Length = 216
Score = 211 bits (537), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 102/183 (55%), Positives = 129/183 (70%), Gaps = 6/183 (3%)
Query: 2 AEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPG 61
A LASIFGTE+DRVNC FY+KIGACRHG+RCSR H KP S T+++ N+YQ P M P
Sbjct: 3 ASRLASIFGTEQDRVNCSFYYKIGACRHGERCSRKHIKPQFSQTIVMPNVYQNP-MHRPD 61
Query: 62 VDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEH 121
LD R IQ F+ F+EDLF EL K+G + +++CDN+ DH++GNVY ++ E
Sbjct: 62 -----NKLDQRGIQVDFDMFFEDLFMELCKFGNLLEMHVCDNVGDHLIGNVYARYEWETE 116
Query: 122 AANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELR 181
A A+ LN R+YAGRP+ + SPVTDFREA CRQ + CNRGG+CNFMHLK+ +R L
Sbjct: 117 AQAAVDKLNERWYAGRPLHCELSPVTDFREACCRQNDTGDCNRGGFCNFMHLKRPTRSLI 176
Query: 182 RRL 184
R L
Sbjct: 177 RDL 179
>gi|70952191|ref|XP_745280.1| U2 snRNP auxiliary factor, small subunit [Plasmodium chabaudi
chabaudi]
gi|56525554|emb|CAH89145.1| U2 snRNP auxiliary factor, small subunit, putative [Plasmodium
chabaudi chabaudi]
Length = 299
Score = 210 bits (535), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 128/322 (39%), Positives = 176/322 (54%), Gaps = 57/322 (17%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAEHLA I GTE+DRVNCPF++KIGACRHGD+CSR H KP+ + TL++ +MY P M
Sbjct: 1 MAEHLARIIGTEEDRVNCPFFWKIGACRHGDQCSRSHYKPNSAQTLVIRHMYDNPPMAVA 60
Query: 61 GVDPQGQALDPRKIQ---DHFEDFYEDLFEELSKYGEIESL-NICDNLADHMVGNVYVQF 116
+GQ +D + DHFE+FYE++F+EL K EIE +CDN + +
Sbjct: 61 IA--EGQMVDDEVLDQAADHFEEFYEEVFDELMK-XEIEDXGXVCDNGDHXYWKCLXLNI 117
Query: 117 REEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKI 176
E++A A++ LNGRFYAG+P+ ++++PVTDFREA CRQ+ + C RGGYCNFMH+K +
Sbjct: 118 HXEDYAEKAIKELNGRFYAGKPLQIEYTPVTDFREARCRQFVDGQCRRGGYCNFMHIKHV 177
Query: 177 SRELRRRLFGR--------SRRRRSRSRS----------RSRSPHKYRGGYEERSHGGGR 218
R ++RRL R + R+SR S KY Y
Sbjct: 178 PRTVKRRLHKRMYKKFPMYKKNRKSRDDSDGERRHDRYRDRSRRDKYGSSYNSSRRRHRS 237
Query: 219 GSGRRDDDRDHRLHGRGRRPRSRSPGRRGGRSRSPGARRRSPVRESSVERRAKIEQWNRE 278
S +DD + R H + P RE+S ERR KIE+WN+E
Sbjct: 238 QSSNGNDDDNERSH-------------------------KHPRRENSSERREKIERWNKE 272
Query: 279 KEQADSGNKVDNSSYNDDRNDD 300
+E + N+ N+D N+D
Sbjct: 273 RE-------MKNNQKNNDENED 287
>gi|442763053|gb|JAA73685.1| Putative u2 snrnp splicing factor small subunit, partial [Ixodes
ricinus]
Length = 218
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 115/216 (53%), Positives = 150/216 (69%), Gaps = 12/216 (5%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDM--- 57
MAE+LA I GTE+DRVNCPFY+KIGACRHGD+ SR H KPS + TL++ +MYQ P +
Sbjct: 1 MAENLARIIGTEEDRVNCPFYWKIGACRHGDQGSRAHYKPSAAQTLVIRHMYQNPPVAIA 60
Query: 58 ITPGVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFR 117
I G + LD K DHFE+F+E++F EL KYGEIE + +CDN+ DH++GNVYV++R
Sbjct: 61 IAEGQMISDELLD--KAADHFEEFFEEVFLELMKYGEIEDMVVCDNIGDHIIGNVYVKYR 118
Query: 118 EEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIS 177
+E A A+ L+GRFY G+PI +++PVTDFREA CRQ+ + C RGGYCNFMH+K +
Sbjct: 119 DENSAGLAISMLSGRFYGGKPIQCEYTPVTDFREARCRQFVDGQCRRGGYCNFMHIKHVP 178
Query: 178 RELRRRL-------FGRSRRRRSRSRSRSRSPHKYR 206
R +RR+L + RRR R S SP K R
Sbjct: 179 RSVRRKLNERMYAEYPEYRRRSPRRSDCSASPDKRR 214
>gi|209882274|ref|XP_002142574.1| U2 snRNP auxiliary factor small subunit [Cryptosporidium muris
RN66]
gi|209558180|gb|EEA08225.1| U2 snRNP auxiliary factor small subunit, putative [Cryptosporidium
muris RN66]
Length = 255
Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 124/283 (43%), Positives = 168/283 (59%), Gaps = 37/283 (13%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAEHLA I GTE+DRVNCPFY+KIGACRHGD+CSR H KP+ SPT+++ +MY+ I+
Sbjct: 1 MAEHLARIIGTEEDRVNCPFYWKIGACRHGDQCSRSHYKPTNSPTVIIRHMYENSP-ISL 59
Query: 61 GVDPQGQALDPRKIQDHFED----FYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQF 116
+ +GQ +D K+ D+ D FYE++FEEL+KYGEI L +CDN+ DHM+GNVYV++
Sbjct: 60 AI-AEGQVVDD-KLADNESDRFEEFYEEIFEELAKYGEISDLLVCDNIGDHMIGNVYVRY 117
Query: 117 REEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKI 176
EE+A +AL L GR Y+G+ I + SPV+DF+EA CRQ+ + CNRGGYCNFMH+K I
Sbjct: 118 TNEEYAKSALDKLKGRSYSGKLIDAELSPVSDFKEARCRQFIDGCCNRGGYCNFMHIKHI 177
Query: 177 SRELRRRLFGRSRRRRSRSRSRSRSPHKYRGGYEERSHGGGRGSGRRDDDRDHRLHGRGR 236
R ++ ++F + YR E R S R DD
Sbjct: 178 PRCVKNKIFQQM----------------YRDHPEYSKKKSDRYSDYRHDDLKRE------ 215
Query: 237 RPRSRSPGRRGGRSRSPGARRRSPVRESSVERRAKIEQWNREK 279
R + +R+SS ERR IE WN+++
Sbjct: 216 --------LLDDDDRYDYTKHTKYIRQSSEERRQMIEMWNKQR 250
>gi|402586021|gb|EJW79960.1| U2(RNU2) small nuclear RNA auxiliary factor 1 [Wuchereria
bancrofti]
Length = 215
Score = 207 bits (528), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 102/205 (49%), Positives = 136/205 (66%), Gaps = 2/205 (0%)
Query: 2 AEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPG 61
AE+LASI+GTEKD+VNC FYFKIGACRHGD+CSR H PS S T+LL N+Y P + T
Sbjct: 9 AEYLASIYGTEKDKVNCSFYFKIGACRHGDKCSRTHIMPSFSQTVLLKNLYHNPMIDTRQ 68
Query: 62 VDPQGQA--LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREE 119
D + ++ ++ Q E F E E K+G I+ +N+CDN+ +HM+GNVYV+F E
Sbjct: 69 ADAFAKVGQMNEQEQQYFEEFFEEIFVELEDKFGPIDEMNVCDNIGEHMIGNVYVKFENE 128
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
E A ++ L R++ G P+ + SPVTDFREA CRQYE CN+G +CNFMHLK+ISR+
Sbjct: 129 EDADKCVKGLENRWFNGSPVYAELSPVTDFREACCRQYELGGCNKGAFCNFMHLKQISRD 188
Query: 180 LRRRLFGRSRRRRSRSRSRSRSPHK 204
LRR+L+G R + H+
Sbjct: 189 LRRKLYGSRAEYRGGGYYGGGNWHE 213
>gi|324505367|gb|ADY42309.1| Splicing factor U2AF 35 kDa subunit [Ascaris suum]
Length = 275
Score = 207 bits (526), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 108/218 (49%), Positives = 143/218 (65%), Gaps = 14/218 (6%)
Query: 2 AEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPG 61
AE+LASI+GTEKD+VNC FYFKIGACRHG++CSR H PS S T+LL N+Y P + T
Sbjct: 10 AEYLASIYGTEKDKVNCSFYFKIGACRHGEKCSRTHIMPSFSQTVLLKNLYHNPLIDTRQ 69
Query: 62 VDPQGQA--LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREE 119
D +A + ++ Q E F E E K+G I+ +N+CDN+ +HM+GNVYV+F E
Sbjct: 70 ADAFAKAGQQNDQEQQYFEEFFEELFVELEDKFGPIDEMNVCDNIGEHMIGNVYVKFENE 129
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
E A ++ L+ R++ G PI + SPVTDFREA CRQYE CN+G +CNFMHLK+ISR+
Sbjct: 130 EDADKCVKGLDDRWFNGCPIYAELSPVTDFREACCRQYELGGCNKGAFCNFMHLKQISRD 189
Query: 180 LRRRLFGRSRRRRSRSRSRSRSPHKYRGGYEERSHGGG 217
LRR+L+G SR+ ++ G Y SH G
Sbjct: 190 LRRKLYG------------SRADYRGTGYYGAGSHAGA 215
>gi|164660716|ref|XP_001731481.1| hypothetical protein MGL_1664 [Malassezia globosa CBS 7966]
gi|159105381|gb|EDP44267.1| hypothetical protein MGL_1664 [Malassezia globosa CBS 7966]
Length = 258
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 100/205 (48%), Positives = 136/205 (66%), Gaps = 6/205 (2%)
Query: 9 FGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQA 68
+GTE+D+VNC FYFKIGACRHGDRCSR H +P S T+LLSN+YQ P + DP +A
Sbjct: 8 YGTEQDKVNCSFYFKIGACRHGDRCSRRHIRPERSHTILLSNVYQNPKYL----DPDCRA 63
Query: 69 LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRN 128
D ++Q F+ F+ D F+ LS YG + +++CDN+ DH++GNVY ++ E+ A A+
Sbjct: 64 SDA-ELQQQFDAFFSDFFKGLSDYGTLIEMHVCDNVGDHLIGNVYARYETEDDAQRAVDG 122
Query: 129 LNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRS 188
LN R+Y RP+ + SPV+DFREA CRQ E N CNRGG CNFMHL+ S EL R L+ +
Sbjct: 123 LNTRWYHQRPLFAELSPVSDFREACCRQNETNECNRGGQCNFMHLRYASPELVRELYQQL 182
Query: 189 RRRRSRSRSRSRSPHKY-RGGYEER 212
R + + H + R G++ER
Sbjct: 183 AVENRERRREAHAKHDFLRLGWKER 207
>gi|149056307|gb|EDM07738.1| U2 small nuclear RNA auxiliary factor 1-like 4, isoform CRA_c
[Rattus norvegicus]
Length = 188
Score = 203 bits (517), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 92/159 (57%), Positives = 120/159 (75%), Gaps = 1/159 (0%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLH KP+ S T++L N+Y+ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIVLLNLYRNPQNTAQ 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREE 119
D + ++Q+H+++F+E++F EL KYGEIE +N+CDNL DH+VGNVYV+FR E
Sbjct: 61 TADGSHCHVSDVEVQEHYDNFFEEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRRE 120
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYE 158
E A A+ LN R++ G+ + + SPVTDFRE+ CRQYE
Sbjct: 121 EDAERAVAELNNRWFNGQAVHAELSPVTDFRESCCRQYE 159
>gi|50555327|ref|XP_505072.1| YALI0F06292p [Yarrowia lipolytica]
gi|49650942|emb|CAG77879.1| YALI0F06292p [Yarrowia lipolytica CLIB122]
Length = 203
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 94/199 (47%), Positives = 131/199 (65%), Gaps = 1/199 (0%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRP-DMIT 59
MA HLASI+GTE D+VNC FY+KIGACRHG++CSR H KP+ S T+L SN+YQ P + +
Sbjct: 1 MASHLASIYGTENDKVNCSFYYKIGACRHGEKCSRKHVKPTYSNTVLCSNLYQNPANGES 60
Query: 60 PGVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREE 119
++ G + + HF FYED++ E +K G +E + +C+N DH+ GN Y++FR +
Sbjct: 61 DPLNEDGSKMTKADLDKHFALFYEDIYMEAAKLGRLEEMIVCENGNDHLTGNTYLRFRNQ 120
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
E A A N R+YAGRP+ + SPV DF E+ CRQ++ N C+RG CNFMH K+ R+
Sbjct: 121 EDAQRACDLFNTRWYAGRPVWCELSPVNDFTESCCRQHDTNECSRGNMCNFMHAKRPPRQ 180
Query: 180 LRRRLFGRSRRRRSRSRSR 198
L + L R+ +R R R
Sbjct: 181 LAKDLDASQRKFYNRQRDR 199
>gi|390478906|ref|XP_003735604.1| PREDICTED: LOW QUALITY PROTEIN: splicing factor U2AF 26 kDa subunit
[Callithrix jacchus]
Length = 283
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 101/186 (54%), Positives = 130/186 (69%), Gaps = 3/186 (1%)
Query: 2 AEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPG 61
AE+LASIFGTEKD+VNC FYFKIGACRHGD+ SRLH KP+ + T++L N+Y+ P
Sbjct: 62 AEYLASIFGTEKDKVNCSFYFKIGACRHGDQYSRLHNKPTFTQTVVLLNLYRNPQNTAQI 121
Query: 62 VDPQGQALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREEE 120
D + ++Q+H++ F E++F EL KYGEIE +N+ DNL DH+VGNVYV+FR EE
Sbjct: 122 ADGSHCHVSDVEVQEHYDSF-EEVFTELQEKYGEIEEMNVXDNLGDHLVGNVYVKFRREE 180
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A+ LN F G+ + + S VTDFRE+ C QYE C RGG+CNFMHL+ IS+ L
Sbjct: 181 DAERAVAELNNXF-NGQAVHAELSHVTDFRESCCCQYEMGECTRGGFCNFMHLRPISQNL 239
Query: 181 RRRLFG 186
R R G
Sbjct: 240 RPRSMG 245
>gi|118399961|ref|XP_001032304.1| zinc finger protein [Tetrahymena thermophila]
gi|89286644|gb|EAR84641.1| zinc finger protein [Tetrahymena thermophila SB210]
Length = 389
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 91/186 (48%), Positives = 126/186 (67%), Gaps = 1/186 (0%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQR-PDMIT 59
MAE L+ ++GTE+D+VNCPFYFKIGACR+ ++C R+H +PS S T+L+ +MYQ P +
Sbjct: 60 MAEKLSRMYGTEEDKVNCPFYFKIGACRYENKCLRIHNRPSESQTILIKHMYQNSPTELA 119
Query: 60 PGVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREE 119
+ + +K +H+E+FYE++F EL+ YGEI+ L ICDN+ DHM GNVYV++ E
Sbjct: 120 LAQGNRVSEEEAQKALNHYEEFYEEVFLELASYGEIDDLIICDNIGDHMKGNVYVKYVRE 179
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
A L +L R+Y + + +FSPVTDF A C+QY E C R GYCN++H K I R
Sbjct: 180 SEALKCLMSLKTRYYDKQQLQPEFSPVTDFSNAKCKQYIEGQCKRSGYCNYIHSKPIGRP 239
Query: 180 LRRRLF 185
RR LF
Sbjct: 240 FRRSLF 245
>gi|312071157|ref|XP_003138478.1| hypothetical protein LOAG_02893 [Loa loa]
gi|307766351|gb|EFO25585.1| hypothetical protein LOAG_02893 [Loa loa]
Length = 307
Score = 201 bits (511), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 93/186 (50%), Positives = 133/186 (71%), Gaps = 11/186 (5%)
Query: 12 EKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDP 71
+K RVNC FY KIGACRHGD+CSRLH +P+ S T+LL N Y +I Q L
Sbjct: 19 QKHRVNCSFYLKIGACRHGDKCSRLHIRPNSSKTILLKNFYHFDGIIR-------QELSK 71
Query: 72 RKIQDHFEDFYEDLFEEL-SKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLN 130
+ Q F++F+ +++ E+ KYGEI+ +N+CDN +HM+GNVY++F E +A+NA++ LN
Sbjct: 72 EREQREFDEFFREVYLEIDEKYGEIDEMNVCDNTGEHMLGNVYIKFLHESNASNAMKALN 131
Query: 131 GRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRL---FGR 187
R++ G+PI + SPV+DFR+A CRQYE C+RGG+CNFMHLKK+S L+R+L G+
Sbjct: 132 NRWFDGKPIHCELSPVSDFRDACCRQYENGECSRGGFCNFMHLKKVSSSLKRKLEKESGK 191
Query: 188 SRRRRS 193
+RR++S
Sbjct: 192 ARRKKS 197
>gi|397625258|gb|EJK67720.1| hypothetical protein THAOC_11212 [Thalassiosira oceanica]
Length = 188
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 97/172 (56%), Positives = 123/172 (71%), Gaps = 6/172 (3%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRP----- 55
MA HLA I GTE+DRVNCPFYFKIGACRHGDRCSR H KP+ S T+L+ ++Y+ P
Sbjct: 1 MACHLARIHGTEEDRVNCPFYFKIGACRHGDRCSRHHHKPAFSQTVLIKHIYRHPIREAE 60
Query: 56 -DMITPGVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYV 114
+ G +D K ++ F FYED +EELSK+G IE+L+ICDNL DHM+G+ Y
Sbjct: 61 LNAARMGQSVDVIQIDEAKAKEDFLSFYEDFYEELSKFGRIEALHICDNLGDHMLGHAYC 120
Query: 115 QFREEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGG 166
+F EEE AA+AL +NGR+Y GR + V+FSPV DFREA CR ++E+ C RGG
Sbjct: 121 KFSEEEEAADALNVMNGRYYDGRQMEVEFSPVLDFREARCRDFDEDSCRRGG 172
>gi|67474354|ref|XP_652926.1| U2 auxiliary factor [Entamoeba histolytica HM-1:IMSS]
gi|56469830|gb|EAL47539.1| U2 auxiliary factor, putative [Entamoeba histolytica HM-1:IMSS]
gi|449709632|gb|EMD48863.1| U2 auxiliary factor, putative [Entamoeba histolytica KU27]
Length = 227
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 98/197 (49%), Positives = 139/197 (70%), Gaps = 2/197 (1%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA+ LASI GTEKD+VNC F+FKIGACRHGD C+R H +P IS T+LL+++Y P I
Sbjct: 1 MAQDLASIHGTEKDKVNCAFFFKIGACRHGDSCTRNHFQPEISRTILLTHLYDNP-YIHK 59
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
+ + +D F FYED+F EL+K+GEI+ + +C NL++HM GNVYV+FR+E+
Sbjct: 60 EESSMTEDEKKKIKKD-FNIFYEDIFNELAKHGEIDEMLVCRNLSEHMTGNVYVRFRDEK 118
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
+A+ A++ L R+YAGR I +S VTDF+EA C+QYE C+R G+CNF+H+ + + L
Sbjct: 119 NASEAMKFLLARYYAGRMIQPSYSHVTDFKEARCKQYESGECDRHGFCNFLHVIEPNHSL 178
Query: 181 RRRLFGRSRRRRSRSRS 197
+R+LF R R+ R R+
Sbjct: 179 QRKLFERQPLRQKRIRN 195
>gi|407044754|gb|EKE42803.1| U2 snRNP auxiliary factor small subunit, putative [Entamoeba
nuttalli P19]
Length = 227
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 98/197 (49%), Positives = 139/197 (70%), Gaps = 2/197 (1%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA+ LASI GTEKD+VNC F+FKIGACRHGD C+R H +P IS T+LL+++Y P I
Sbjct: 1 MAQDLASIHGTEKDKVNCAFFFKIGACRHGDSCTRNHFQPEISRTILLTHLYDNP-YIHK 59
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
+ + +D F FYED+F EL+K+GEI+ + +C NL++HM GNVYV+FR+E+
Sbjct: 60 EESSMTEDEKKKIKKD-FNIFYEDIFNELAKHGEIDEMLVCRNLSEHMTGNVYVRFRDEK 118
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
+A+ A++ L R+YAGR I +S VTDF+EA C+QYE C+R G+CNF+H+ + + L
Sbjct: 119 NASEAMKFLLARYYAGRMIQPSYSHVTDFKEARCKQYESGECDRHGFCNFLHVIEPNHSL 178
Query: 181 RRRLFGRSRRRRSRSRS 197
+R+LF R R+ R R+
Sbjct: 179 QRKLFERQPLRQKRIRN 195
>gi|426242749|ref|XP_004015233.1| PREDICTED: splicing factor U2AF 26 kDa subunit isoform 2 [Ovis
aries]
Length = 181
Score = 197 bits (501), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 99/186 (53%), Positives = 121/186 (65%), Gaps = 40/186 (21%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLH KP+ S
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFS----------------- 43
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREE 119
+++F EL KYGEIE +N+CDNL DH+VGNVYV+FR E
Sbjct: 44 ----------------------QEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRRE 81
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
E A A+ LN R++ G+ + + SPVTDFRE+ CRQYE C RGG+CNFMHL+ ISR+
Sbjct: 82 EDAERAVVELNNRWFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISRD 141
Query: 180 LRRRLF 185
LRR+L+
Sbjct: 142 LRRQLY 147
>gi|344298239|ref|XP_003420801.1| PREDICTED: splicing factor U2AF 26 kDa subunit-like [Loxodonta
africana]
Length = 181
Score = 197 bits (501), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 99/186 (53%), Positives = 120/186 (64%), Gaps = 40/186 (21%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLH KP+ S
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFS----------------- 43
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREE 119
+++F EL KYGEIE +N+CDNL DH+VGNVYV+FR E
Sbjct: 44 ----------------------QEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRRE 81
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
E A A+ LN R++ G+ + + SPVTDFRE+ CRQYE C RGG+CNFMHL+ ISR
Sbjct: 82 EDAERAVTELNNRWFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISRN 141
Query: 180 LRRRLF 185
LRR+L+
Sbjct: 142 LRRQLY 147
>gi|194215326|ref|XP_001492664.2| PREDICTED: splicing factor U2AF 26 kDa subunit-like isoform 1
[Equus caballus]
gi|345785118|ref|XP_853689.2| PREDICTED: splicing factor U2AF 26 kDa subunit isoform 2 [Canis
lupus familiaris]
gi|410983235|ref|XP_003997947.1| PREDICTED: splicing factor U2AF 26 kDa subunit [Felis catus]
Length = 181
Score = 197 bits (501), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 99/186 (53%), Positives = 120/186 (64%), Gaps = 40/186 (21%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLH KP+ S
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFS----------------- 43
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREE 119
+++F EL KYGEIE +N+CDNL DH+VGNVYV+FR E
Sbjct: 44 ----------------------QEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRRE 81
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
E A A+ LN R++ G+ + + SPVTDFRE+ CRQYE C RGG+CNFMHL+ ISR
Sbjct: 82 EDAERAVAELNNRWFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISRN 141
Query: 180 LRRRLF 185
LRR+L+
Sbjct: 142 LRRQLY 147
>gi|335289512|ref|XP_003355908.1| PREDICTED: splicing factor U2AF 26 kDa subunit-like isoform 2 [Sus
scrofa]
Length = 181
Score = 197 bits (501), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 99/186 (53%), Positives = 120/186 (64%), Gaps = 40/186 (21%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLH KP+ S
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFS----------------- 43
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREE 119
+++F EL KYGEIE +N+CDNL DH+VGNVYV+FR E
Sbjct: 44 ----------------------QEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRRE 81
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
E A A+ LN R++ G+ + + SPVTDFRE+ CRQYE C RGG+CNFMHL+ ISR
Sbjct: 82 EDAERAVAELNNRWFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISRN 141
Query: 180 LRRRLF 185
LRR+L+
Sbjct: 142 LRRQLY 147
>gi|114676803|ref|XP_001160959.1| PREDICTED: splicing factor U2AF 26 kDa subunit isoform 3 [Pan
troglodytes]
Length = 181
Score = 197 bits (500), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 101/197 (51%), Positives = 124/197 (62%), Gaps = 40/197 (20%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIG CRHGDRCSRLH KP+ S
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGVCRHGDRCSRLHNKPTFS----------------- 43
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREE 119
+++F EL KYGEIE +N+CDNL DH+VGNVYV+FR E
Sbjct: 44 ----------------------QEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRRE 81
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
E A+ LN R++ G+ + + SPVTDFRE+ CRQYE C RGG+CNFMHL+ IS+
Sbjct: 82 EDGERAVAELNNRWFNGQAVHGELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISQN 141
Query: 180 LRRRLFGRSRRRRSRSR 196
L+R+L+GR R RS R
Sbjct: 142 LQRQLYGRGPRHRSPPR 158
>gi|397490405|ref|XP_003816195.1| PREDICTED: splicing factor U2AF 26 kDa subunit isoform 2 [Pan
paniscus]
Length = 181
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 101/197 (51%), Positives = 124/197 (62%), Gaps = 40/197 (20%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIG CRHGDRCSRLH KP+ S
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGVCRHGDRCSRLHNKPTFS----------------- 43
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREE 119
+++F EL KYGEIE +N+CDNL DH+VGNVYV+FR E
Sbjct: 44 ----------------------QEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRRE 81
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
E A+ LN R++ G+ + + SPVTDFRE+ CRQYE C RGG+CNFMHL+ IS+
Sbjct: 82 EDGERAVAELNNRWFNGQAVHGELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISQN 141
Query: 180 LRRRLFGRSRRRRSRSR 196
L+R+L+GR R RS R
Sbjct: 142 LQRQLYGRGPRHRSPPR 158
>gi|167377957|ref|XP_001734607.1| splicing factor U2AF 23 kDa subunit [Entamoeba dispar SAW760]
gi|165903812|gb|EDR29241.1| splicing factor U2AF 23 kDa subunit, putative [Entamoeba dispar
SAW760]
Length = 227
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 96/197 (48%), Positives = 140/197 (71%), Gaps = 2/197 (1%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA+ LASI GTEKD+VNC F+FKIGACRHGD C+R H +P IS T+LL+++Y P I
Sbjct: 1 MAQDLASIHGTEKDKVNCAFFFKIGACRHGDSCTRNHFQPEISRTILLTHLYDNP-YIHK 59
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
+ + + +D F FYED+F EL+K+GE++ + +C NL++HM GNVYV+FR+E+
Sbjct: 60 EENSMTEEEKKKIKKD-FNIFYEDIFNELAKHGEVDEMLVCGNLSEHMTGNVYVRFRDEK 118
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
+A+ A++ L R+YAGR I +S VTDF+EA C+QYE C+R G+CNF+H+ + + L
Sbjct: 119 NASEAMKFLLARYYAGRMIQPSYSHVTDFKEARCKQYECGECDRHGFCNFLHVIEPNHSL 178
Query: 181 RRRLFGRSRRRRSRSRS 197
+R+LF R R+ R ++
Sbjct: 179 QRKLFERQPLRQKRIKN 195
>gi|332262088|ref|XP_003280097.1| PREDICTED: splicing factor U2AF 26 kDa subunit isoform 2 [Nomascus
leucogenys]
Length = 181
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 101/194 (52%), Positives = 124/194 (63%), Gaps = 40/194 (20%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VN FYFKIGACRHGDRCSRLH KP+ S
Sbjct: 1 MAEYLASIFGTEKDKVNRSFYFKIGACRHGDRCSRLHNKPTFS----------------- 43
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREE 119
+++F EL KYGEIE +N+CDNL DH+VGNVYV+FR E
Sbjct: 44 ----------------------QEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRRE 81
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
E A A+ L+ R++ G+ + + SPVTDFRE+ CRQYE C RGG+CNFMHL+ IS+
Sbjct: 82 EDAERAVAELSNRWFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISQN 141
Query: 180 LRRRLFGRSRRRRS 193
LRR+L+G RRRS
Sbjct: 142 LRRQLYGWGPRRRS 155
>gi|358333982|dbj|GAA30118.2| splicing factor U2AF 35 kDa subunit [Clonorchis sinensis]
Length = 220
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 98/174 (56%), Positives = 121/174 (69%), Gaps = 5/174 (2%)
Query: 15 RVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKI 74
RVNC FYFKIGACRHG++CSRLH KPS T+LL N+Y P D G ++ ++
Sbjct: 11 RVNCSFYFKIGACRHGEQCSRLHNKPSFGQTILLQNLYIAPQNTAQSAD--GSHINLTEV 68
Query: 75 QDH---FEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNG 131
Q E F E E KYGEIE +N+CDNL DH+VGNVY++FR EE A A+++LN
Sbjct: 69 QAQQIFDEFFEEVFVECEEKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVQDLNL 128
Query: 132 RFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLF 185
R++ GRP+ + SPVTDFREA CRQYE C RGG+CNFMHLK ISREL R+L+
Sbjct: 129 RWFGGRPVHAELSPVTDFREACCRQYELGECTRGGFCNFMHLKPISRELCRKLY 182
>gi|440295153|gb|ELP88066.1| splicing factor U2AF 23 kDa subunit, putative [Entamoeba invadens
IP1]
Length = 198
Score = 194 bits (492), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 135/194 (69%), Gaps = 2/194 (1%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA LA+I GTEKD+VNC F++K+GACRHGD CSR H +P +SPT+LL+NMY P ++
Sbjct: 1 MATDLATIHGTEKDKVNCSFFYKVGACRHGDACSRNHHRPEVSPTILLTNMYDNP--LSH 58
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
+ + A + + ++D F FYED+F EL++ GEI+ + +C NL +HM+GNV+V+F + +
Sbjct: 59 KEEEKMTADELKVVRDGFNVFYEDVFNELAERGEIDEMIVCANLNEHMLGNVFVRFHDVK 118
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A +A++ L R+Y GR I +S VTDFR+A C+Q E C RGG+CNF+H+ + + L
Sbjct: 119 GAESAMKILLARYYGGRMIQPSYSHVTDFRDAKCKQQEAGNCERGGFCNFIHVLEPNHAL 178
Query: 181 RRRLFGRSRRRRSR 194
+R+L R RR R
Sbjct: 179 KRKLLERQPLRRQR 192
>gi|403331231|gb|EJY64551.1| U2 splicing factor subunit, putative [Oxytricha trifallax]
Length = 452
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 124/321 (38%), Positives = 173/321 (53%), Gaps = 57/321 (17%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA+ LA IFGTE+D+ HGD C+RLH KP ++ T+L+ +MY+ P
Sbjct: 1 MADRLARIFGTEEDK-------------HGDTCTRLHNKPVVAQTILMPHMYENPPAAVA 47
Query: 61 GVDPQGQALDPRKIQ--DHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFRE 118
D Q D I+ +HFE FYE++F EL+KYGE+E ++ICDN+ +H++GNVY +F +
Sbjct: 48 FADG-LQVPDHLLIEAINHFESFYEEVFLELAKYGEVEEMHICDNIGEHLLGNVYCKFIQ 106
Query: 119 EEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISR 178
E A A+R LNGR+YAG+ I V+FSPVTDF E+ CR Y E C+RGGYCNFMHLK +++
Sbjct: 107 ELDADKAMRGLNGRYYAGKQIKVEFSPVTDFNESRCRLYVEGQCDRGGYCNFMHLKHMTK 166
Query: 179 ELRRRL------------FGRSRRRRSRSRSRSRSPH------KYRGGYEERSHGGGRGS 220
E + + R +R+R +++S P K R +RS R
Sbjct: 167 EFQHDMKCLMYSEFPEYKAHRDQRKRVAKQNKSIEPESNKSISKSRSPQPKRSRSKDRKQ 226
Query: 221 GRR--------------DDDRDHRLHGRGRRPRSR------SPGRRGGRSRSPGARRRSP 260
RR + R H + RR +S+ S R R+ +R+ S
Sbjct: 227 KRRYNRKSSQSSSRSKSRNSTTSRSHSQDRRHKSKRKHHRYSRSRSRNERRARNSRKDSR 286
Query: 261 V---RESSVERRAKIEQWNRE 278
V RE+S ERRA I WN E
Sbjct: 287 VNLGRETSKERRAIIAAWNDE 307
>gi|443916710|gb|ELU37680.1| splicing factor U2AF 26 kDa subunit [Rhizoctonia solani AG-1 IA]
Length = 517
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 89/174 (51%), Positives = 116/174 (66%), Gaps = 6/174 (3%)
Query: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALD 70
++DRVNC FY+KIGACRHGDRCSR H +P S T+LL N+Y P + Q
Sbjct: 297 VQQDRVNCSFYYKIGACRHGDRCSRKHIRPPFSQTILLPNVYHNPAHNPSATYSEDQ--- 353
Query: 71 PRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLN 130
+Q F+ YEDL+ EL+KYG + L++CDN+ DH++GNVY ++ E A A+ LN
Sbjct: 354 ---LQQDFDTTYEDLYCELAKYGNLLELHVCDNVGDHLIGNVYARYEWETEAQAAVDALN 410
Query: 131 GRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRL 184
R+YAGRP+ + SPVTDFREA CRQ E CNRGG+CNFMHL+ S++L L
Sbjct: 411 NRWYAGRPLYAELSPVTDFREACCRQNENGECNRGGFCNFMHLRLASKKLVSEL 464
>gi|426388322|ref|XP_004060590.1| PREDICTED: splicing factor U2AF 26 kDa subunit [Gorilla gorilla
gorilla]
Length = 181
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 96/186 (51%), Positives = 119/186 (63%), Gaps = 40/186 (21%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLH K + S
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKSTFS----------------- 43
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREE 119
+++F EL KYGEIE +N+CDNL DH+VGNVYV+FR E
Sbjct: 44 ----------------------QEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRRE 81
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
E A+ LN R++ G+ + V+ SPVTDFRE+ CRQYE C RGG+CNFMHL+ IS+
Sbjct: 82 EDGQWAVAELNNRWFNGQAVHVELSPVTDFRESCCRQYEMGECTRGGFCNFMHLQPISQN 141
Query: 180 LRRRLF 185
L+R+L+
Sbjct: 142 LQRQLY 147
>gi|297276805|ref|XP_001112161.2| PREDICTED: splicing factor U2AF 26 kDa subunit-like [Macaca
mulatta]
Length = 181
Score = 190 bits (483), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 95/186 (51%), Positives = 119/186 (63%), Gaps = 40/186 (21%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
M E+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLH KP+ S
Sbjct: 1 MGEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFS----------------- 43
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREE 119
+++F EL KYGEIE +N+CD+L DH+VGNVYV+FR E
Sbjct: 44 ----------------------QEVFTELQEKYGEIEEMNMCDDLGDHLVGNVYVKFRRE 81
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
E A A+ LN R++ G+ + + SPVTDFRE+ CRQYE C RGG+CNFMHL+ IS+
Sbjct: 82 EDAERAVAELNNRWFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISQN 141
Query: 180 LRRRLF 185
LRR+++
Sbjct: 142 LRRQVY 147
>gi|145477617|ref|XP_001424831.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124391898|emb|CAK57433.1| unnamed protein product [Paramecium tetraurelia]
Length = 289
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 90/204 (44%), Positives = 131/204 (64%), Gaps = 11/204 (5%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA L ++GTE+D+VNC FY KIGACR+ ++C R+H+ P IS T+L +MYQ M
Sbjct: 1 MAGGLERVYGTEEDKVNCSFYIKIGACRYENKCQRIHSIPPISQTILFKHMYQNSPM--E 58
Query: 61 GVDPQGQALDPRKIQD---HFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFR 117
G A+ I++ FE+FYED+F +L+++GEIE L +C+N+ DH+VGNVYV++
Sbjct: 59 VAIASGNAVSQAGIEEALEKFENFYEDVFLKLAEFGEIEDLIVCENIGDHLVGNVYVKYT 118
Query: 118 EE---EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLK 174
E E NAL+NL+ Y RP+ +++SPV DF A C+QY + C RGG CN++HLK
Sbjct: 119 SELFAESCFNALQNLS---YENRPLQMEYSPVLDFSSAKCKQYIDGTCQRGGACNYLHLK 175
Query: 175 KISRELRRRLFGRSRRRRSRSRSR 198
KIS + ++ LF + R +
Sbjct: 176 KISTKFKKSLFNQMYEEHPEYREK 199
>gi|94536809|ref|NP_001035515.1| splicing factor U2AF 26 kDa subunit isoform 1 [Homo sapiens]
gi|92090952|gb|AAT72770.3| U2 small nuclear RNA auxiliary factor 1-like 3 splicing variant 1
[Homo sapiens]
Length = 181
Score = 187 bits (475), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 94/186 (50%), Positives = 118/186 (63%), Gaps = 40/186 (21%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIG CRHGDRCSRLH KP+ S
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGVCRHGDRCSRLHNKPTFS----------------- 43
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREE 119
+++F EL KYGEIE +N+CDNL DH+VGNVYV+FR E
Sbjct: 44 ----------------------QEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRRE 81
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
E A+ L+ R++ G+ + + SPVTDFRE+ CRQYE C RGG+CNFMHL+ IS+
Sbjct: 82 EDGERAVAELSNRWFNGQAVHGELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISQN 141
Query: 180 LRRRLF 185
L+R+L+
Sbjct: 142 LQRQLY 147
>gi|145484545|ref|XP_001428282.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124395367|emb|CAK60884.1| unnamed protein product [Paramecium tetraurelia]
Length = 312
Score = 187 bits (475), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 86/201 (42%), Positives = 126/201 (62%), Gaps = 5/201 (2%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA L ++GTE+D+VNC FY KIGACR+ ++C R+H+ P IS T+L +MYQ M
Sbjct: 1 MAGGLERVYGTEEDKVNCSFYIKIGACRYENKCQRIHSIPPISQTILFKHMYQNSPM--E 58
Query: 61 GVDPQGQALDPRKIQD---HFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFR 117
G A+ I++ FE+FYED+F +L+++GEIE L +C+N+ DH+VGNVYV++
Sbjct: 59 VAIASGNAVSQAGIEEALEKFENFYEDVFLKLAEFGEIEDLIVCENIGDHLVGNVYVKYT 118
Query: 118 EEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIS 177
E A + L Y RP+ +++SPV DF A C+QY + C RGG CN++HLKKIS
Sbjct: 119 SELFAESCFNTLQNLSYENRPLQMEYSPVLDFSSAKCKQYIDGTCQRGGACNYLHLKKIS 178
Query: 178 RELRRRLFGRSRRRRSRSRSR 198
+ ++ LF + R +
Sbjct: 179 TKFKKSLFNQMYEEHPEYREK 199
>gi|344304841|gb|EGW35073.1| hypothetical protein SPAPADRAFT_130696 [Spathaspora passalidarum
NRRL Y-27907]
Length = 251
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 82/187 (43%), Positives = 120/187 (64%)
Query: 16 VNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKIQ 75
V C FY KIGACRHG++CS+ H KP+ S TLLLSN+YQ P + T D L P++IQ
Sbjct: 17 VTCAFYNKIGACRHGEKCSKKHIKPTTSRTLLLSNLYQNPKLKTATTDDAEDELTPKQIQ 76
Query: 76 DHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYA 135
+ F+ FY D+F + GEI L +C+N +H+ GNVYV+++ E A+ +++ LN ++
Sbjct: 77 EIFDQFYRDIFVHFATTGEISQLVVCENENNHLNGNVYVRYKSETDASESMKQLNSEWFN 136
Query: 136 GRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRRRRSRS 195
GRP+ + SPV F EA CR YE +VC+RG +CN+MH++K +++L LF + R
Sbjct: 137 GRPVHCELSPVDSFSEANCRAYETDVCSRGEHCNYMHVRKPTKKLADDLFKAQEKTRLLK 196
Query: 196 RSRSRSP 202
R + P
Sbjct: 197 RMQELIP 203
>gi|211939918|gb|ACJ13439.1| U2 snRNP auxiliary factor [Amphidinium carterae]
Length = 203
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 87/176 (49%), Positives = 120/176 (68%), Gaps = 1/176 (0%)
Query: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMY-QRPDMITPGVDPQGQAL 69
TE+DRVNCPFYFKIGACR+GDRC+R+HT+P+ TLL+ +Y P+ + D + +
Sbjct: 14 TEEDRVNCPFYFKIGACRNGDRCNRMHTRPTKGHTLLIPRLYPSIPEALVVANDDEWDDV 73
Query: 70 DPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNL 129
Q H E FY++++ ELS YGE+E + + DN++DHM+GN+YV++ EE A A + L
Sbjct: 74 QYDLAQAHCEAFYQEVWLELSSYGEVEDMVVLDNVSDHMLGNIYVRYYREEDAEVAAQKL 133
Query: 130 NGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLF 185
+ RFY R I V++SPV +F EA CR Y E C RGG CNFMH K I + +RRR+
Sbjct: 134 SNRFYGTRLIQVEYSPVANFSEARCRTYHETRCARGGLCNFMHTKHIPKAIRRRVV 189
>gi|406696973|gb|EKD00243.1| splicing factor [Trichosporon asahii var. asahii CBS 8904]
Length = 161
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 87/166 (52%), Positives = 111/166 (66%), Gaps = 5/166 (3%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA HLA+I+GTE+DRVNC FY KIGACRHGDRCSR H KP S T+LL N+Y P
Sbjct: 1 MASHLANIYGTEQDRVNCSFYLKIGACRHGDRCSRKHIKPQFSQTVLLPNVYNNPSHT-- 58
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
P+G + ++Q F+ FYED F EL KYG ++ +++CDN+ DH+ GNVYV++ E
Sbjct: 59 ---PEGLTMTKDELQADFDRFYEDFFIELCKYGNVQEMHVCDNIGDHLEGNVYVRYEWEA 115
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGG 166
A A+ LN R+Y RP+ + SPV+DFREA CRQ E C R G
Sbjct: 116 EANKAVEQLNNRWYGMRPLHAELSPVSDFREACCRQNELGECKREG 161
>gi|145478691|ref|XP_001425368.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124392438|emb|CAK57970.1| unnamed protein product [Paramecium tetraurelia]
Length = 302
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 88/193 (45%), Positives = 130/193 (67%), Gaps = 11/193 (5%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA L ++GTE+D+VNC FY KIGACR+ ++C R+H+ P IS T+L +MYQ +
Sbjct: 1 MAGGLERVYGTEEDKVNCSFYIKIGACRYENKCQRIHSIPPISQTILFKHMYQNSPI--E 58
Query: 61 GVDPQGQALDPRKIQD---HFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFR 117
G A+ I++ FE+FYED+F +L+++GEIE L +C+N+ DH+VGNVYV++
Sbjct: 59 VAIASGNAVSQAGIEEALEKFENFYEDVFLKLAEFGEIEDLIVCENIGDHLVGNVYVKYT 118
Query: 118 EEEHAA---NALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLK 174
E +A NAL+NL+ Y RP+ +++SPV DF A C+QY + C RGG CN++HLK
Sbjct: 119 SEYYAEGCFNALQNLS---YENRPLQMEYSPVLDFSSAKCKQYIDGTCQRGGACNYLHLK 175
Query: 175 KISRELRRRLFGR 187
KIS + ++ LF +
Sbjct: 176 KISTKFKKSLFNQ 188
>gi|294654416|ref|XP_456476.2| DEHA2A03058p [Debaryomyces hansenii CBS767]
gi|199428865|emb|CAG84428.2| DEHA2A03058p [Debaryomyces hansenii CBS767]
Length = 234
Score = 184 bits (466), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 81/184 (44%), Positives = 127/184 (69%), Gaps = 5/184 (2%)
Query: 13 KDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPR 72
+DR+ C FY KIGACRHG++CSR H KPS S T+LL N+YQ P + G+ L+P+
Sbjct: 5 EDRIICTFYTKIGACRHGEKCSRKHVKPSSSDTILLPNLYQNPKL----NKNDGEELNPK 60
Query: 73 KIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGR 132
++Q++F+ FY+D+F + + +GE+ S+ +C+N +H+ GNVYV+F E+ A NA+ LN
Sbjct: 61 QVQEYFDHFYKDIFLKFALFGEVYSMVVCENDNNHLNGNVYVKFANEDSAYNAVMLLNQE 120
Query: 133 FYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRRRR 192
++ GRP+ + SPV F +A CR YE + CNRG +CNFMH+ K + +L+ LF +S+ +
Sbjct: 121 WFGGRPVHCELSPVESFHDANCRAYESSTCNRGDHCNFMHIHKPTPQLKSSLF-KSQEKS 179
Query: 193 SRSR 196
+ ++
Sbjct: 180 TLTK 183
>gi|145530874|ref|XP_001451209.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124418853|emb|CAK83812.1| unnamed protein product [Paramecium tetraurelia]
Length = 302
Score = 184 bits (466), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 86/193 (44%), Positives = 130/193 (67%), Gaps = 11/193 (5%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA L ++GTE+D+VNC FY KIGACR+ ++C R+H+ P IS T+L +MYQ +
Sbjct: 1 MAGGLERVYGTEEDKVNCSFYIKIGACRYENKCQRIHSIPPISQTILFKHMYQNSPI--E 58
Query: 61 GVDPQGQALDPRKIQD---HFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFR 117
G A+ I++ FE+FYED+F +L+++GEIE L +C+N+ DH+VGNVYV++
Sbjct: 59 VAIASGNAVSQAGIEEALEKFENFYEDVFLKLAEFGEIEDLIVCENIGDHLVGNVYVKYT 118
Query: 118 EEEHAA---NALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLK 174
E +A NAL+NL+ Y +P+ +++SPV DF A C+QY + C RGG CN++HLK
Sbjct: 119 SEYYAEGCFNALQNLS---YENKPLQMEYSPVLDFSSAKCKQYIDGTCQRGGACNYLHLK 175
Query: 175 KISRELRRRLFGR 187
KI+ + ++ LF +
Sbjct: 176 KIATKFKKSLFNQ 188
>gi|358375412|dbj|GAA91994.1| splicing factor U2AF 23 kDa subunit [Aspergillus kawachii IFO 4308]
Length = 184
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 101/215 (46%), Positives = 129/215 (60%), Gaps = 37/215 (17%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA +LASIFGTE+D+VNC FY+KIGACRHGDRCSR H KPS S T+L+ NMYQ P
Sbjct: 1 MANYLASIFGTEQDKVNCSFYYKIGACRHGDRCSRKHVKPSYSQTILMPNMYQ-----NP 55
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
DP+ + ++P ++Q+HF+ FYED++ E+ KYGE+E L +CDN DH++GNVY +F+ EE
Sbjct: 56 AYDPKSK-MNPSQLQNHFDAFYEDVWCEMCKYGELEELVVCDNNNDHLIGNVYARFKYEE 114
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A LN R G C RGG+CNF+H K S EL
Sbjct: 115 DAQAACDALNSRCGEG-------------------------CVRGGFCNFIHRKDPSNEL 149
Query: 181 RRRL------FGRSRRRRSRSRSRSRSPHKYRGGY 209
R L + + R R +RS SRS SP R Y
Sbjct: 150 DRDLRLSTKKWLKERGRDARSVSRSPSPEPTRRRY 184
>gi|148677752|gb|EDL09699.1| mCG12604 [Mus musculus]
Length = 212
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 83/153 (54%), Positives = 112/153 (73%), Gaps = 1/153 (0%)
Query: 35 RLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKIQDHFEDFYEDLFEELS-KYG 93
RLH KP+ S T+ L N+Y+ P + D A+ ++Q+H+++F+E++F E+ KYG
Sbjct: 6 RLHNKPTFSQTIALLNIYRNPQNSSQSADGLRCAVSDVEMQEHYDEFFEEVFTEMEEKYG 65
Query: 94 EIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREAT 153
E+E +N+CDNL DH+VGNVYV+FR EE A A+ +LN R++ G+PI + SPVTDFREA
Sbjct: 66 EVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAMIDLNNRWFNGQPIHAELSPVTDFREAC 125
Query: 154 CRQYEENVCNRGGYCNFMHLKKISRELRRRLFG 186
CRQYE C RGG+CNFMHLK ISRELRR L+G
Sbjct: 126 CRQYEMGECTRGGFCNFMHLKPISRELRRELYG 158
>gi|355727234|gb|AES09127.1| U2 small nuclear RNA auxiliary factor 1-like 4 [Mustela putorius
furo]
Length = 168
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 84/165 (50%), Positives = 115/165 (69%), Gaps = 1/165 (0%)
Query: 36 LHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKIQDHFEDFYEDLFEELS-KYGE 94
LH KP+ S T++L N+YQ P D + ++Q+H+++F+E++F EL KYGE
Sbjct: 1 LHNKPTFSQTIVLLNLYQNPQNTAQTADGSHCHVSDEEVQEHYDNFFEEVFTELQEKYGE 60
Query: 95 IESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATC 154
IE +N+CDNL DH+VGNVYV+FR EE A A+ LN R++ G+ + + SPVTDFRE+ C
Sbjct: 61 IEEMNVCDNLGDHLVGNVYVKFRREEDAERAVAELNNRWFNGQAVHAELSPVTDFRESCC 120
Query: 155 RQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRRRRSRSRSRS 199
RQYE C RGG+CNFMHL+ ISR L+R+L+GR R RS RS +
Sbjct: 121 RQYEMGECTRGGFCNFMHLRPISRNLQRQLYGRGPRHRSPPRSHT 165
>gi|170580643|ref|XP_001895352.1| U2 small nuclear RNA auxiliary factor small subunit [Brugia malayi]
gi|158597751|gb|EDP35805.1| U2 small nuclear RNA auxiliary factor small subunit, putative
[Brugia malayi]
Length = 294
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 86/187 (45%), Positives = 120/187 (64%), Gaps = 23/187 (12%)
Query: 12 EKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDP 71
+K RVNC FY KIGACRHGD+CSRLHT P+ S
Sbjct: 19 QKHRVNCSFYLKIGACRHGDKCSRLHTXPTSSKV----------------------NFPK 56
Query: 72 RKIQDHFEDFYEDLFEEL-SKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLN 130
K Q F++F+ +++ E+ +YGEI+ +N+CDN +HM+GNVY++F E +A NA++ LN
Sbjct: 57 EKEQREFDEFFREVYLEIDEEYGEIDEMNVCDNTGEHMLGNVYIKFMHESNAXNAVKALN 116
Query: 131 GRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRR 190
R++ G+PI + SPV+DFR+A CRQYE C+RGG+CNFMHLKK+S L+R+L S
Sbjct: 117 NRWFNGKPIHCELSPVSDFRDACCRQYENGECSRGGFCNFMHLKKVSSSLKRKLEKESEG 176
Query: 191 RRSRSRS 197
R+ R +S
Sbjct: 177 RKRRKKS 183
>gi|380807533|gb|AFE75642.1| splicing factor U2AF 35 kDa subunit isoform b, partial [Macaca
mulatta]
Length = 192
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 80/150 (53%), Positives = 109/150 (72%), Gaps = 1/150 (0%)
Query: 37 HTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKIQDHFEDFYEDLFEELS-KYGEI 95
H KP+ S T+L+ N+Y+ P D A+ ++Q+H+++F+E++F E+ KYGE+
Sbjct: 1 HNKPTFSQTILIQNIYRNPQNSAQTADGSHCAVSDVEMQEHYDEFFEEVFTEMEEKYGEV 60
Query: 96 ESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCR 155
E +N+CDNL DH+VGNVYV+FR EE A A+ +LN R++ G+PI + SPVTDFREA CR
Sbjct: 61 EEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCR 120
Query: 156 QYEENVCNRGGYCNFMHLKKISRELRRRLF 185
QYE C RGG+CNFMHLK ISRELRR L+
Sbjct: 121 QYEMGECTRGGFCNFMHLKPISRELRRELY 150
>gi|33086652|gb|AAP92638.1| Cb2-806 [Rattus norvegicus]
Length = 254
Score = 174 bits (440), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 83/178 (46%), Positives = 117/178 (65%), Gaps = 1/178 (0%)
Query: 23 KIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKIQDHFEDFY 82
++G H S L + + T++L N+Y+ P D + ++Q+H+++F+
Sbjct: 57 RVGYTLHAVPLSELRSLLNFVQTIVLLNLYRNPQNTAQTADGSHCHVSDVEVQEHYDNFF 116
Query: 83 EDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIV 141
E++F EL KYGEIE +N+CDNL DH+VGNVYV+FR EE A A+ LN R++ G+ +
Sbjct: 117 EEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAVAELNNRWFNGQAVHA 176
Query: 142 DFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRRRRSRSRSRS 199
+ SPVTDFRE+ CRQYE C RGG+CNFMHL+ ISR LRR+L+GR R RS RS +
Sbjct: 177 ELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISRNLRRQLYGRGPRHRSPPRSHT 234
>gi|440302723|gb|ELP95030.1| splicing factor U2AF 35 kDa subunit, putative [Entamoeba invadens
IP1]
Length = 263
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 81/174 (46%), Positives = 111/174 (63%), Gaps = 2/174 (1%)
Query: 13 KDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPR 72
K++ C F+FKIGACRHGD C + H +P S TLL + MYQ P + + +G D +
Sbjct: 14 KEKPICDFFFKIGACRHGDSCKKQHFRPESSQTLLFTRMYQNPKIRID--ESEGLEKDEK 71
Query: 73 KIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGR 132
K++ F +FYED+F ++ YGE+E +C N DHM+GNVYV++ +EE A A L GR
Sbjct: 72 KMRHDFNEFYEDVFSQIQNYGEVEEFIVCGNDNDHMMGNVYVKYTKEEEAKKAKDELTGR 131
Query: 133 FYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFG 186
+YAG+ + F VTDFREA CRQ E+ C RGG CNF+H+ + L+R LF
Sbjct: 132 YYAGKMLQPSFCRVTDFREAICRQQEQGTCTRGGQCNFIHVIEPDPSLKRGLFA 185
>gi|444513449|gb|ELV10328.1| Splicing factor U2AF 35 kDa subunit [Tupaia chinensis]
Length = 365
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 79/149 (53%), Positives = 110/149 (73%), Gaps = 1/149 (0%)
Query: 45 TLLLSNMYQRPDMITPGVDPQGQALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDN 103
T+ L N+Y+ P + D A+ ++Q+H+++F+E++F E+ KYGE+E +N+CDN
Sbjct: 127 TIALLNIYRNPQNSSQSADGLRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDN 186
Query: 104 LADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCN 163
L DH+VGNVYV+FR EE A A+ +LN R++ G+PI + SPVTDFREA CRQYE C
Sbjct: 187 LGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECT 246
Query: 164 RGGYCNFMHLKKISRELRRRLFGRSRRRR 192
RGG+CNFMHLK ISRELRR L+GR R+++
Sbjct: 247 RGGFCNFMHLKPISRELRRELYGRRRKKQ 275
>gi|150951186|ref|XP_001387460.2| Splicing factor U2AF 23 kDa subunit (U2 auxiliary factor 23 kDa
subunit) (U2 snRNP auxiliary factor small subunit)
(U2AF23) [Scheffersomyces stipitis CBS 6054]
gi|149388389|gb|EAZ63437.2| Splicing factor U2AF 23 kDa subunit (U2 auxiliary factor 23 kDa
subunit) (U2 snRNP auxiliary factor small subunit)
(U2AF23), partial [Scheffersomyces stipitis CBS 6054]
Length = 184
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 75/173 (43%), Positives = 116/173 (67%), Gaps = 4/173 (2%)
Query: 13 KDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPR 72
+DR+ C FY KIGACRHG++CSR H +P S T+LL N+YQ P + +G+ L+P+
Sbjct: 11 EDRLPCTFYNKIGACRHGEKCSRKHIRPLTSFTILLPNLYQNPKL----NKNEGEELNPK 66
Query: 73 KIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGR 132
++Q +F+ F++D+F + + GEI+ L +C+N +H+ GNVYV+F+ ++ AA A LN
Sbjct: 67 QLQQNFDQFFKDIFVKFATLGEIKELVVCENENNHLNGNVYVRFKTKQEAAEATLLLNQE 126
Query: 133 FYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLF 185
++ RP+ + SPV+ F EA CR YE + C RG +CNFMH++ ++ L LF
Sbjct: 127 WFNARPVHCELSPVSSFPEANCRAYETSSCTRGDHCNFMHVRHPTQSLVESLF 179
>gi|344234071|gb|EGV65941.1| splicing factor U2AF 23 kDa subunit [Candida tenuis ATCC 10573]
Length = 213
Score = 167 bits (423), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 80/173 (46%), Positives = 117/173 (67%), Gaps = 6/173 (3%)
Query: 14 DRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRK 73
D +NC FY KIGACRHG++CS+ HTKP S T+LL+N+YQ P + + Q L+P++
Sbjct: 3 DFMNCQFYTKIGACRHGEKCSKRHTKPLTSYTVLLANLYQNPKL-----NKNEQDLNPKQ 57
Query: 74 IQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRF 133
I+++FE+FY+D+F L K EI +L +C+N +H+ GNVY +F+ EE A A+ LN +
Sbjct: 58 IREYFENFYKDVFIRLGKIEEIAALVVCENENNHLNGNVYCRFKNEEGARRAVVELNQEW 117
Query: 134 YAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFG 186
+ RP+ + SPV F +A CR Y+ N C+R +CNFMH+ + S EL R+LF
Sbjct: 118 FGSRPVHCELSPVQSFHDANCRDYDTNSCSR-DHCNFMHVIRPSDELERQLFS 169
>gi|441672642|ref|XP_004092375.1| PREDICTED: splicing factor U2AF 35 kDa subunit [Nomascus
leucogenys]
Length = 213
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 76/142 (53%), Positives = 104/142 (73%), Gaps = 1/142 (0%)
Query: 45 TLLLSNMYQRPDMITPGVDPQGQALDPRKIQDHFEDFYEDLFEEL-SKYGEIESLNICDN 103
T+L+ N+Y+ P D A+ ++Q+H+++F+E++F E+ KYGE+E +N+CDN
Sbjct: 18 TILIQNIYRNPQNSAQTADGSHCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDN 77
Query: 104 LADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCN 163
L DH+VGNVYV+FR EE A A+ +LN R++ G+PI + SPVTDFREA CRQYE C
Sbjct: 78 LGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECT 137
Query: 164 RGGYCNFMHLKKISRELRRRLF 185
RGG+CNFMHLK ISRELRR L+
Sbjct: 138 RGGFCNFMHLKPISRELRRELY 159
>gi|448519331|ref|XP_003868065.1| hypothetical protein CORT_0B09260 [Candida orthopsilosis Co 90-125]
gi|380352404|emb|CCG22630.1| hypothetical protein CORT_0B09260 [Candida orthopsilosis]
Length = 280
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 75/170 (44%), Positives = 109/170 (64%), Gaps = 4/170 (2%)
Query: 16 VNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKIQ 75
+ C FY KIGACRHG++CS+ H KP+ S TLLL+N+YQ P + + + + ++IQ
Sbjct: 46 ITCSFYNKIGACRHGEKCSKKHIKPTTSKTLLLANLYQNPKL----NKNESEEVTEKQIQ 101
Query: 76 DHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYA 135
+ F+ FY+D+F L+ GEI +C+N +H+ GNVYVQF A+ LN ++
Sbjct: 102 EQFDLFYQDIFIHLANMGEIYDFVVCENENNHLNGNVYVQFVSSSDASTVNTTLNQEWFN 161
Query: 136 GRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLF 185
GRP+ D SPVTDF +A CR Y+ N C RG CN+MH+++ S +LR L+
Sbjct: 162 GRPVHSDLSPVTDFADARCRAYDTNSCERGEMCNYMHIRQPSPKLRELLY 211
>gi|260945991|ref|XP_002617293.1| hypothetical protein CLUG_02737 [Clavispora lusitaniae ATCC 42720]
gi|238849147|gb|EEQ38611.1| hypothetical protein CLUG_02737 [Clavispora lusitaniae ATCC 42720]
Length = 258
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 80/201 (39%), Positives = 124/201 (61%), Gaps = 17/201 (8%)
Query: 2 AEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPG 61
A HL +F + + C FY KIGACRHGD+CSR H +P+ S T+LL+N+Y
Sbjct: 22 ARHLLHLFSMDSQAI-CTFYQKIGACRHGDKCSRKHIRPTESKTVLLANLY--------- 71
Query: 62 VDPQGQALDPRKIQ-DHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
Q+ + K+ + F+ FY D++ ++ GEIE + +C+N H+ GNVYV++ + +
Sbjct: 72 ----TQSAEKNKVSPESFDQFYADIYTHAAQSGEIEQMVVCENENFHLCGNVYVRYSDTQ 127
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A+ LN +Y GRP+ + SPV++F EA CR Y+ N C+RG +CNFMH ++ S EL
Sbjct: 128 SADKAVAQLNQEWYGGRPVYCELSPVSNFAEANCRAYDNNQCSRGDHCNFMHTRRPSSEL 187
Query: 181 RRRLFGRSRRRRSRSRSRSRS 201
R +L R +R+S + ++ R+
Sbjct: 188 RAQL--RQAQRKSLALAKIRA 206
>gi|167396211|ref|XP_001741956.1| splicing factor U2AF 23 kDa subunit [Entamoeba dispar SAW760]
gi|165893246|gb|EDR21570.1| splicing factor U2AF 23 kDa subunit, putative [Entamoeba dispar
SAW760]
Length = 278
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/181 (48%), Positives = 116/181 (64%), Gaps = 7/181 (3%)
Query: 6 ASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQ 65
A I GT K++ C F++KIGACRHGD C++ H KP S TLL + MYQ P +D
Sbjct: 10 AIINGT-KEKPVCEFFYKIGACRHGDACNKTHIKPESSQTLLFTRMYQNP---KKRID-D 64
Query: 66 GQAL--DPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAA 123
G+AL D +KI F +FYED+F EL YGEI +C N DHM+GNVYV++ EEHAA
Sbjct: 65 GEALERDEKKIMREFNEFYEDVFRELENYGEILDFIVCGNDNDHMMGNVYVKYDTEEHAA 124
Query: 124 NALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRR 183
A + L GR+YA + + +F VT+F+EA CRQ + C RGG CNF+H+ + R L+
Sbjct: 125 AAKKALTGRYYAKKILAPNFCRVTEFKEAICRQQQIGTCTRGGMCNFIHVIEPDRNLKYD 184
Query: 184 L 184
L
Sbjct: 185 L 185
>gi|354544051|emb|CCE40773.1| hypothetical protein CPAR2_108080 [Candida parapsilosis]
Length = 307
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 73/170 (42%), Positives = 107/170 (62%), Gaps = 4/170 (2%)
Query: 16 VNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKIQ 75
+ C FY KIGACRHG++CS+ H KP+ S TLLL+N+YQ P + + + L ++IQ
Sbjct: 75 ITCAFYNKIGACRHGEKCSKKHIKPTTSKTLLLANLYQNPKL----NKNETEELTEKQIQ 130
Query: 76 DHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYA 135
+ F+ FY+D+F L GEI L +C+N +H+ GNVYVQF A+ LN ++
Sbjct: 131 EQFDLFYQDIFIHLGSMGEIYDLVVCENENNHLNGNVYVQFNSASDASLVNTALNQEWFN 190
Query: 136 GRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLF 185
GRP+ D SPV F +A CR Y+ N C RG CN+MH+++ + L++ L+
Sbjct: 191 GRPVHSDLSPVDSFPDAHCRAYDTNSCERGEMCNYMHIRQPTTSLKQSLY 240
>gi|67482135|ref|XP_656417.1| U2 snRNP auxiliary factor small subunit [Entamoeba histolytica
HM-1:IMSS]
gi|56473613|gb|EAL51031.1| U2 snRNP auxiliary factor small subunit, putative [Entamoeba
histolytica HM-1:IMSS]
gi|449708944|gb|EMD48310.1| zinc finger Cx8-C-x5-C-x3-H type (and similar) domain containing
protein [Entamoeba histolytica KU27]
Length = 279
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/179 (47%), Positives = 113/179 (63%), Gaps = 6/179 (3%)
Query: 8 IFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQ 67
I K++ C F++KIGACRHGD C++ H KP S TLL + MYQ P +D G+
Sbjct: 12 IINGTKEKPVCEFFYKIGACRHGDACNKTHIKPESSQTLLFTRMYQNP---KKRID-DGE 67
Query: 68 AL--DPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANA 125
AL D +KI F +FYED+F EL YGEI +C N DHM+GNVYV++ EEHAA A
Sbjct: 68 ALERDEKKIMREFNEFYEDVFRELENYGEILDFIVCGNDNDHMMGNVYVKYDTEEHAAAA 127
Query: 126 LRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRL 184
+ L GR+YA + + +F VT+F+EA CRQ + C RGG CNF+H+ + R L+ L
Sbjct: 128 KKALTGRYYAKKILTPNFCRVTEFKEAICRQQQIGTCTRGGMCNFIHVIEPDRNLKYDL 186
>gi|380802765|gb|AFE73258.1| splicing factor U2AF 26 kDa subunit isoform 1, partial [Macaca
mulatta]
Length = 131
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 82/169 (48%), Positives = 104/169 (61%), Gaps = 40/169 (23%)
Query: 20 FYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKIQDHFE 79
FYFKIGACRHGDRCSRLH KP+ S
Sbjct: 2 FYFKIGACRHGDRCSRLHNKPTFS------------------------------------ 25
Query: 80 DFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRP 138
+++F EL KYGEIE +N+CD+L DH+VGNVYV+FR EE A A+ LN R++ G+
Sbjct: 26 ---QEVFTELQEKYGEIEEMNMCDDLGDHLVGNVYVKFRREEDAERAVAELNNRWFNGQA 82
Query: 139 IIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGR 187
+ + SPVTDFRE+ CRQYE C RGG+CNFMHL+ IS+ LRR+++GR
Sbjct: 83 VHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISQNLRRQVYGR 131
>gi|407038759|gb|EKE39293.1| zinc finger c-x8-c-x5-c-x3-h type domain containing protein
[Entamoeba nuttalli P19]
Length = 279
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/179 (47%), Positives = 113/179 (63%), Gaps = 6/179 (3%)
Query: 8 IFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQ 67
I K++ C F++KIGACRHGD C++ H KP S TLL + MYQ P +D G+
Sbjct: 12 IINGTKEKPVCEFFYKIGACRHGDACNKTHIKPESSQTLLFTRMYQNP---KKRID-DGE 67
Query: 68 AL--DPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANA 125
AL D +KI F +FYED+F EL YGEI +C N DHM+GNVYV++ EEHAA A
Sbjct: 68 ALERDEKKIMREFNEFYEDVFRELENYGEILDFIVCGNDNDHMMGNVYVKYDTEEHAAAA 127
Query: 126 LRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRL 184
+ L GR+YA + + +F VT+F+EA CRQ + C RGG CNF+H+ + R L+ L
Sbjct: 128 KKALTGRYYAKKILTPNFCRVTEFKEAICRQQQIGTCTRGGMCNFIHVIEPDRNLKYDL 186
>gi|149244812|ref|XP_001526949.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449343|gb|EDK43599.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 295
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 82/204 (40%), Positives = 125/204 (61%), Gaps = 6/204 (2%)
Query: 16 VNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKIQ 75
+ C FY KIGACRHG++CS+ H KP+ S TL+L+N+YQ P + D Q ++Q
Sbjct: 52 ITCQFYNKIGACRHGEKCSKKHIKPTNSKTLILANLYQNPKLNKNESDELSQL----QLQ 107
Query: 76 DHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYA 135
+ + F++D+F LS+ GE+ SL +C+N +H+ GNVYV+F E+ A A + LN ++
Sbjct: 108 ESLDLFFQDVFIHLSQKGEVASLVVCENENNHLNGNVYVRFYSEKDAQQANQELNQEWFN 167
Query: 136 GRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLF-GRSRRRRSR 194
GRP+ D SPV F EA CR Y+ N C RG CN+MHL+ ++ L +L G+ ++ S+
Sbjct: 168 GRPVHSDLSPVYSFDEARCRAYDTNSCERGEMCNYMHLRLPTKSLLDKLTQGQEKKYASK 227
Query: 195 SRSRSRSPHKYRGG-YEERSHGGG 217
R ++ + GG Y+ + GG
Sbjct: 228 RLERLKTELRELGGDYDAGFYNGG 251
>gi|402585483|gb|EJW79423.1| U2 snRNP splicing factor small subunit, partial [Wuchereria
bancrofti]
Length = 160
Score = 160 bits (404), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 74/148 (50%), Positives = 104/148 (70%), Gaps = 8/148 (5%)
Query: 12 EKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDP 71
+K RVNC FY KIGACRHGD+CSRLHT+P S T+LL N Y D+I Q
Sbjct: 19 QKHRVNCSFYLKIGACRHGDKCSRLHTRPISSKTILLKNFYHFGDIIR-------QDFSK 71
Query: 72 RKIQDHFEDFYEDLFEEL-SKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLN 130
K Q F++F+ +++ E+ +YGEI+ +N+CDN +HM+GNVY++F E +A+NA++ LN
Sbjct: 72 EKEQREFDEFFREVYLEIDEEYGEIDEMNVCDNTGEHMLGNVYIKFMHESNASNAVKALN 131
Query: 131 GRFYAGRPIIVDFSPVTDFREATCRQYE 158
R++ G+PI + SPV+DFR+A CRQYE
Sbjct: 132 NRWFNGKPIHCELSPVSDFRDACCRQYE 159
>gi|302502949|ref|XP_003013435.1| hypothetical protein ARB_00253 [Arthroderma benhamiae CBS 112371]
gi|302652540|ref|XP_003018117.1| hypothetical protein TRV_07874 [Trichophyton verrucosum HKI 0517]
gi|291176999|gb|EFE32795.1| hypothetical protein ARB_00253 [Arthroderma benhamiae CBS 112371]
gi|291181728|gb|EFE37472.1| hypothetical protein TRV_07874 [Trichophyton verrucosum HKI 0517]
Length = 180
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 91/215 (42%), Positives = 121/215 (56%), Gaps = 41/215 (19%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MA +LASIFGTE+D+ T+LL N+YQ P
Sbjct: 1 MANYLASIFGTEQDK-----------------------------TILLPNLYQNPQY--- 28
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
DP+ + ++P ++Q+HF+ FYED + E+ KYGEIE + +C+N DH++GNVY +F+ E+
Sbjct: 29 --DPKNK-MNPSQLQNHFDAFYEDFWCEMCKYGEIEEVVVCENNNDHLIGNVYARFKYED 85
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A LN R+YA RPI + SPVTDFREA CR C RGG+CNF+H K+ S EL
Sbjct: 86 SAQKACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSEEL 145
Query: 181 RRRL------FGRSRRRRSRSRSRSRSPHKYRGGY 209
R L + R R R RS +RS SP R Y
Sbjct: 146 DRELELSTKKWLRLRGRDERSVTRSPSPEPTRKRY 180
>gi|355727231|gb|AES09126.1| U2 small nuclear RNA auxiliary factor 1 [Mustela putorius furo]
Length = 133
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 71/120 (59%), Positives = 95/120 (79%), Gaps = 1/120 (0%)
Query: 68 ALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREEEHAANAL 126
A+ ++Q+H+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR EE A A+
Sbjct: 1 AVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAV 60
Query: 127 RNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFG 186
+LN R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISRELRR L+G
Sbjct: 61 IDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELYG 120
>gi|332263383|ref|XP_003280726.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 2 [Nomascus
leucogenys]
gi|332872231|ref|XP_003319153.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 4 [Pan
troglodytes]
gi|397506809|ref|XP_003823909.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 3 [Pan
paniscus]
Length = 202
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 70/119 (58%), Positives = 94/119 (78%), Gaps = 1/119 (0%)
Query: 68 ALDPRKIQDHFEDFYEDLFEEL-SKYGEIESLNICDNLADHMVGNVYVQFREEEHAANAL 126
A+ ++Q+H+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR EE A A+
Sbjct: 30 AVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAV 89
Query: 127 RNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLF 185
+LN R++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISRELRR L+
Sbjct: 90 IDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 148
>gi|324505230|gb|ADY42252.1| Splicing factor U2AF 35 kDa subunit [Ascaris suum]
Length = 151
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 72/135 (53%), Positives = 99/135 (73%), Gaps = 4/135 (2%)
Query: 2 AEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPG 61
AE+LASI+GTEKD+VNC FYFKIGACRHGD+CSR H +P+ SPT+LL N Y P +
Sbjct: 18 AEYLASIYGTEKDKVNCSFYFKIGACRHGDKCSRTHHRPTFSPTILLQNFYHNPVVDVRQ 77
Query: 62 VDPQGQA--LDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFRE 118
D + DP + Q +F++FYE++F EL KYGEI+ +N+C+N+ +HM+GNVYV+F
Sbjct: 78 ADAFDKVGKKDPEE-QKYFDEFYEEVFTELERKYGEIDEMNVCENIGEHMIGNVYVKFVR 136
Query: 119 EEHAANALRNLNGRF 133
EE A A+++L R+
Sbjct: 137 EEDAEKAVKDLQNRW 151
>gi|432119315|gb|ELK38408.1| Splicing factor U2AF 35 kDa subunit [Myotis davidii]
Length = 121
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/145 (51%), Positives = 94/145 (64%), Gaps = 24/145 (16%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCS LH KP+ S T+ L N+Y+ P +
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSWLHNKPTFSQTVALLNVYRNPHNSSQ 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
D E+ KYGE+E +N+CDNL DH+VGNVYVQFR EE
Sbjct: 61 SAD------------------------EMEKYGEVEEMNVCDNLRDHLVGNVYVQFRPEE 96
Query: 121 HAANALRNLNGRFYAGRPIIVDFSP 145
A A+ +L+ R++ G+PI + SP
Sbjct: 97 DAEKAVMDLDNRWFNGQPIYAELSP 121
>gi|395751008|ref|XP_003780722.1| PREDICTED: LOW QUALITY PROTEIN: splicing factor U2AF 26 kDa subunit
[Pongo abelii]
Length = 179
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 70/142 (49%), Positives = 100/142 (70%), Gaps = 1/142 (0%)
Query: 45 TLLLSNMYQRPDMITPGVDPQGQALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDN 103
T++L N+Y+ P D + ++Q+H+++F+E++F EL KYGE E +N+CDN
Sbjct: 4 TIVLLNLYRNPQNTAQTADGSHCHVSDVEVQEHYDNFFEEVFTELQEKYGEXEEMNVCDN 63
Query: 104 LADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCN 163
L DH+VGNVYV+FR EE A A+ LN R++ G+ + + SPVTDFRE+ CRQYE C
Sbjct: 64 LGDHLVGNVYVKFRREEDAERAVAELNNRWFNGQAVHAELSPVTDFRESCCRQYEMGECT 123
Query: 164 RGGYCNFMHLKKISRELRRRLF 185
RGG+CNFMHL+ IS+ LRR+L+
Sbjct: 124 RGGFCNFMHLRPISQNLRRQLY 145
>gi|294875296|ref|XP_002767259.1| U2 small nuclear ribonucleoprotein, auxiliary factor, small
subunit, putative [Perkinsus marinus ATCC 50983]
gi|239868814|gb|EEQ99976.1| U2 small nuclear ribonucleoprotein, auxiliary factor, small
subunit, putative [Perkinsus marinus ATCC 50983]
Length = 235
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 101/179 (56%), Gaps = 43/179 (24%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDM--- 57
MAEHLA IFGTE+DRVNCPFYFKIG CRHGD+CSR H +P S T+LL MYQ P
Sbjct: 1 MAEHLARIFGTEEDRVNCPFYFKIGTCRHGDQCSRQHNRPVSSQTVLLKGMYQNPPAAIA 60
Query: 58 ITPGVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFR 117
+ G D + D Q+HFE FYE++F EL+ YG
Sbjct: 61 LAEGQDVADEQAD--AAQEHFEAFYEEVFLELANYG------------------------ 94
Query: 118 EEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKI 176
FYAGR I ++SPVTDF EA CRQ+++ C+RGG+CNF+H K +
Sbjct: 95 --------------TFYAGRIIQPEYSPVTDFSEARCRQFDDAQCSRGGFCNFIHWKHV 139
>gi|380793475|gb|AFE68613.1| splicing factor U2AF 35 kDa subunit isoform a, partial [Macaca
mulatta]
Length = 155
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 69/113 (61%), Positives = 91/113 (80%), Gaps = 1/113 (0%)
Query: 74 IQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGR 132
+Q+H+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR EE A A+ +LN R
Sbjct: 1 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 60
Query: 133 FYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLF 185
++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISRELRR L+
Sbjct: 61 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 113
>gi|190347807|gb|EDK40149.2| hypothetical protein PGUG_04247 [Meyerozyma guilliermondii ATCC
6260]
Length = 307
Score = 154 bits (388), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 137/266 (51%), Gaps = 28/266 (10%)
Query: 18 CPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKIQDH 77
C FY KIGACRHGD+CSR H P S T+L+ N+Y+ +P+G + ++IQ
Sbjct: 5 CTFYSKIGACRHGDKCSRRHIHPRRSDTILIFNLYR---------NPKGSS---QQIQQR 52
Query: 78 FEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGR 137
F+ FY+D+F +++ GEI+++ +C+N DH+ GNVYV+F + A + LN +Y
Sbjct: 53 FDQFYQDVFVYIARIGEIDAMVVCENDNDHLNGNVYVKFMNDTVAETVMNALNEEWYDAL 112
Query: 138 PIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRRRRSRSRS 197
PI + SPV F++A CR Y+ C+RGG+CNFMH+++ + E++ L + +
Sbjct: 113 PIHCELSPVESFQDANCRAYDAGACSRGGHCNFMHIRRPTPEVKSVLHQAQDKWKVEKAL 172
Query: 198 RSRSP--------HKYRGGYEERS--------HGGGRGSGRRDDDRDHRLHGRGRRPRSR 241
+P + YEER R ++ + R+ + R
Sbjct: 173 EKVAPDDPLVVAMRERVKAYEEREARRKESEKKVTQESEKRVTEESEKRVTEENEKKRVT 232
Query: 242 SPGRRGGRSRSPGARRRSPVRESSVE 267
+ R +S + + S ++E+ +E
Sbjct: 233 EENEKVKRVKSEESEKVSKIQETKIE 258
>gi|393907857|gb|EFO28010.2| hypothetical protein LOAG_00486 [Loa loa]
Length = 251
Score = 154 bits (388), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 72/136 (52%), Positives = 98/136 (72%), Gaps = 6/136 (4%)
Query: 2 AEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMIT-- 59
AE+LASI+GTEKD+VNC FYFKIGACRHGD+CSR H +P+ SPT+LL N Y P +
Sbjct: 118 AEYLASIYGTEKDKVNCSFYFKIGACRHGDKCSRTHHRPTFSPTVLLQNFYHNPIVDVRQ 177
Query: 60 -PGVDPQGQALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFR 117
D G+ D Q +F++FYE++F EL KYGEI+ +N+C+N+ +HM+GNVYV+F
Sbjct: 178 ADAFDKVGKKNDEE--QAYFDEFYEEVFTELERKYGEIDEMNVCENIGEHMIGNVYVKFM 235
Query: 118 EEEHAANALRNLNGRF 133
EE A A+++L R+
Sbjct: 236 REEDAEKAVKDLENRW 251
>gi|68800138|ref|NP_001020375.1| splicing factor U2AF 35 kDa subunit isoform c [Homo sapiens]
gi|194226294|ref|XP_001490926.2| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 1
[Equus caballus]
gi|332263381|ref|XP_003280725.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 1 [Nomascus
leucogenys]
gi|332872229|ref|XP_003319152.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 3 [Pan
troglodytes]
gi|338720813|ref|XP_003364254.1| PREDICTED: splicing factor U2AF 35 kDa subunit-like isoform 2
[Equus caballus]
gi|345795464|ref|XP_535599.3| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 4 [Canis
lupus familiaris]
gi|359323577|ref|XP_003640136.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 3 [Canis
lupus familiaris]
gi|397506805|ref|XP_003823907.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 1 [Pan
paniscus]
gi|397506807|ref|XP_003823908.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 2 [Pan
paniscus]
gi|403271413|ref|XP_003927619.1| PREDICTED: splicing factor U2AF 35 kDa subunit [Saimiri boliviensis
boliviensis]
gi|410969865|ref|XP_003991412.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 1 [Felis
catus]
gi|410969867|ref|XP_003991413.1| PREDICTED: splicing factor U2AF 35 kDa subunit isoform 2 [Felis
catus]
gi|441672637|ref|XP_004092374.1| PREDICTED: splicing factor U2AF 35 kDa subunit [Nomascus
leucogenys]
gi|33341702|gb|AAQ15222.1|AF370386_1 FP793 [Homo sapiens]
gi|119629906|gb|EAX09501.1| U2(RNU2) small nuclear RNA auxiliary factor 1, isoform CRA_a [Homo
sapiens]
gi|119629909|gb|EAX09504.1| U2(RNU2) small nuclear RNA auxiliary factor 1, isoform CRA_a [Homo
sapiens]
gi|119629910|gb|EAX09505.1| U2(RNU2) small nuclear RNA auxiliary factor 1, isoform CRA_a [Homo
sapiens]
Length = 167
Score = 153 bits (387), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 69/113 (61%), Positives = 91/113 (80%), Gaps = 1/113 (0%)
Query: 74 IQDHFEDFYEDLFEEL-SKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGR 132
+Q+H+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+FR EE A A+ +LN R
Sbjct: 1 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 60
Query: 133 FYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLF 185
++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISRELRR L+
Sbjct: 61 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 113
>gi|401414385|ref|XP_003871690.1| putative U2 splicing auxiliary factor [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322487909|emb|CBZ23153.1| putative U2 splicing auxiliary factor [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 210
Score = 153 bits (387), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 75/198 (37%), Positives = 117/198 (59%), Gaps = 13/198 (6%)
Query: 18 CPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQ-ALDPRKIQD 76
C F+ K+GACRHGD+C++LH +P SPT+L MY P I D + LD + ++
Sbjct: 8 CAFFSKMGACRHGDQCTKLHYRPDTSPTVLFPLMYPNPHAIAHIKDREWTFELDKKYLKK 67
Query: 77 HFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAG 136
HFE FY++++ ++G I L + NL DH++GNVY++F + + A ++ L G+
Sbjct: 68 HFEHFYKEVWRTFMEFGRIAELRVVSNLGDHLLGNVYIRFEDPQVATRIVKELRGKKLND 127
Query: 137 RPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRL------FGRSRR 190
++ + SPVT+F EA C++ EN C RG CN++H+ K+SR L +L + + +
Sbjct: 128 VIVLPELSPVTNFAEACCKEDLENRCQRGEQCNYLHIMKVSRRLLEKLEKEQSKYWKKKE 187
Query: 191 RR------SRSRSRSRSP 202
+R R RSRSRSP
Sbjct: 188 KRHEHDSGDRKRSRSRSP 205
>gi|146415096|ref|XP_001483518.1| hypothetical protein PGUG_04247 [Meyerozyma guilliermondii ATCC
6260]
Length = 307
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 69/167 (41%), Positives = 107/167 (64%), Gaps = 12/167 (7%)
Query: 18 CPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKIQDH 77
C FY KIGACRHGD+CSR H P S T+L+ N+Y+ +P+G + ++IQ
Sbjct: 5 CTFYSKIGACRHGDKCSRRHIHPRRSDTILIFNLYR---------NPKGSS---QQIQQR 52
Query: 78 FEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGR 137
F+ FY+D+F +++ GEI+++ +C+N DH+ GNVYV+F + A + LN +Y
Sbjct: 53 FDQFYQDVFVYIARIGEIDAMVVCENDNDHLNGNVYVKFMNDTVAETVMNALNEEWYDAL 112
Query: 138 PIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRL 184
PI + SPV F++A CR Y+ C+RGG+CNFMH+++ + E++ L
Sbjct: 113 PIHCELSPVESFQDANCRAYDAGACSRGGHCNFMHIRRPTPEVKSVL 159
>gi|257219672|gb|ACV51810.1| ZRSR2Y, partial [Bos taurus]
Length = 445
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 75/167 (44%), Positives = 95/167 (56%), Gaps = 4/167 (2%)
Query: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPG---VDPQGQ 67
EKDR NCPFY K GACR GDRCSR H P+ SPTLL+ +M+ M G DP
Sbjct: 158 MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCGRDDYDPDAN 217
Query: 68 A-LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANAL 126
+I F DFY+D+ E G++ + NL H+ GNVYVQ++ EE AL
Sbjct: 218 LEYSEEEIYQQFLDFYDDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAAL 277
Query: 127 RNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL 173
NGR+YAGR + +F PVT + A C +E C RG YCNF+H+
Sbjct: 278 SLFNGRWYAGRQLQCEFCPVTQWNMAICGLFEIQQCPRGKYCNFLHV 324
>gi|448101861|ref|XP_004199664.1| Piso0_002204 [Millerozyma farinosa CBS 7064]
gi|359381086|emb|CCE81545.1| Piso0_002204 [Millerozyma farinosa CBS 7064]
Length = 229
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/175 (41%), Positives = 113/175 (64%), Gaps = 1/175 (0%)
Query: 12 EKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMIT-PGVDPQGQALD 70
E ++ C FY KIGACRHG++CSR H KP+ S T+L+ N+Y+ P G Q D
Sbjct: 4 ENPKLICTFYTKIGACRHGEKCSRRHIKPTSSDTILMPNLYKNPRFANNEGNGQQAPITD 63
Query: 71 PRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLN 130
+++Q HFEDFY+D+F + G+++++ +C+N +H+ GNVY++F + A +A+ LN
Sbjct: 64 EKELQQHFEDFYKDVFVRAATLGKVDAMVVCENNNNHLNGNVYIKFASRDIAYDAVVKLN 123
Query: 131 GRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLF 185
+Y GRP+ + SPV +A CR Y+ N C+RG +CNFMH+++ S L+ LF
Sbjct: 124 QEWYDGRPVYCELSPVESLSDANCRAYDTNSCSRGDHCNFMHIRRPSPGLKSFLF 178
>gi|255715815|ref|XP_002554189.1| KLTH0E16302p [Lachancea thermotolerans]
gi|238935571|emb|CAR23752.1| KLTH0E16302p [Lachancea thermotolerans CBS 6340]
Length = 189
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 73/165 (44%), Positives = 109/165 (66%), Gaps = 11/165 (6%)
Query: 20 FYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKIQDHFE 79
FY+KIGACRHGDRCS+ H +P SPT+L+ NMY+RP+ P+ Q D F+
Sbjct: 25 FYYKIGACRHGDRCSKKHIRPLHSPTVLVPNMYRRPE----SEGPEAQQRD-------FD 73
Query: 80 DFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPI 139
FYED++ E K+GE++++ +C+N DH+ GNVY+ F A +A + N R++ RP+
Sbjct: 74 AFYEDVYMEACKFGELQAMVVCENKNDHLNGNVYLMFTNSRDANSAKDSFNTRWFNERPL 133
Query: 140 IVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRL 184
+FS V+DFREA CR+++ C RG CNFMH+++ +R+L+ L
Sbjct: 134 YCEFSHVSDFREAICRKHDMRSCERGDECNFMHVQRPTRDLQSDL 178
>gi|402872265|ref|XP_003900044.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like isoform 2 [Papio
anubis]
Length = 485
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 104/275 (37%), Positives = 133/275 (48%), Gaps = 38/275 (13%)
Query: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMIT---PGVDPQGQ 67
EKDR NCPFY K GACR GDRCSR H P+ SPTLL+ +M+ M DP
Sbjct: 176 MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDAS 235
Query: 68 A-LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANAL 126
+I F DFYED+ E G++ + NL H+ GNVYVQ++ EE AL
Sbjct: 236 LEYSEEEIYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAAL 295
Query: 127 RNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKK----------- 175
NGR+YAGR + +F PVT ++ A C +E C RG +CNF+H+ +
Sbjct: 296 SLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFRNPNNEFWEANR 355
Query: 176 ---ISRELRRRLFGRSRRRRSR--------SRSRSR---SP-HKY-RGGYEERSHGGGRG 219
+S + FG++ RR R SR R R SP H Y R G ER RG
Sbjct: 356 DIHLSPDQTGSSFGKNSERRERMGHHDHYSSRLRGRRNPSPDHSYKRNGESERKRSSHRG 415
Query: 220 SGRRDDDRDHRLHGRGRRPRSRSPGRRGGRSRSPG 254
+ H+ H R + SP R R RS G
Sbjct: 416 K------KSHK-HTSKSREKHNSPSRGRNRHRSQG 443
>gi|402872263|ref|XP_003900043.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like isoform 1 [Papio
anubis]
Length = 500
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 104/275 (37%), Positives = 133/275 (48%), Gaps = 38/275 (13%)
Query: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMIT---PGVDPQGQ 67
EKDR NCPFY K GACR GDRCSR H P+ SPTLL+ +M+ M DP
Sbjct: 191 MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDAS 250
Query: 68 A-LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANAL 126
+I F DFYED+ E G++ + NL H+ GNVYVQ++ EE AL
Sbjct: 251 LEYSEEEIYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAAL 310
Query: 127 RNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKK----------- 175
NGR+YAGR + +F PVT ++ A C +E C RG +CNF+H+ +
Sbjct: 311 SLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFRNPNNEFWEANR 370
Query: 176 ---ISRELRRRLFGRSRRRRSR--------SRSRSR---SP-HKY-RGGYEERSHGGGRG 219
+S + FG++ RR R SR R R SP H Y R G ER RG
Sbjct: 371 DIHLSPDQTGSSFGKNSERRERMGHHDHYSSRLRGRRNPSPDHSYKRNGESERKRSSHRG 430
Query: 220 SGRRDDDRDHRLHGRGRRPRSRSPGRRGGRSRSPG 254
+ H+ H R + SP R R RS G
Sbjct: 431 K------KSHK-HTSKSREKHNSPSRGRNRHRSQG 458
>gi|358420073|ref|XP_003584415.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Bos taurus]
Length = 686
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 75/166 (45%), Positives = 95/166 (57%), Gaps = 4/166 (2%)
Query: 12 EKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPG---VDPQGQA 68
EKDR NCPFY K GACR GDRCSR H P+ SPTLL+ +M+ M G DP
Sbjct: 400 EKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCGRDDYDPDANL 459
Query: 69 -LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALR 127
+I F DFY+D+ E G++ + NL H+ GNVYVQ++ EE AL
Sbjct: 460 EYSEEEIYQQFLDFYDDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALS 519
Query: 128 NLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL 173
NGR+YAGR + +F PVT + A C +E C RG YCNF+H+
Sbjct: 520 LFNGRWYAGRQLQCEFCPVTQWNMAICGLFEIQQCPRGKYCNFLHV 565
>gi|340374312|ref|XP_003385682.1| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Amphimedon
queenslandica]
Length = 466
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 65/171 (38%), Positives = 105/171 (61%), Gaps = 6/171 (3%)
Query: 9 FGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQ--- 65
+GTEKD++NCPF+ K GACR+GD CSR+H P+ S TL++ MY + +D
Sbjct: 100 YGTEKDKINCPFFIKTGACRYGDHCSRVHPIPNSSTTLIIRGMYNHVVLTQQLLDEHDED 159
Query: 66 -GQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAAN 124
G +D + F++FY+D+F E K+GE+ + N H+ GN+YVQ+ EE A
Sbjct: 160 VGLEMDDEDMLKDFKEFYQDVFPEFEKFGEVVQFKVSCNYESHLRGNLYVQYSTEEACAA 219
Query: 125 ALRNLNGRFYAGRPIIVDFSPVTDFREATCRQY--EENVCNRGGYCNFMHL 173
A++ NGR+YAG+ + ++ PV ++ A C ++ + + C +G +CNF+H+
Sbjct: 220 AIKQFNGRYYAGKQLSCEYCPVEKWKTAICGEFLKQGSQCPKGKHCNFLHV 270
>gi|355758818|gb|EHH61525.1| U2(RNU2) small nuclear RNA auxiliary factor 1-like 1 [Macaca
fascicularis]
Length = 472
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 74/167 (44%), Positives = 95/167 (56%), Gaps = 4/167 (2%)
Query: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMIT---PGVDPQGQ 67
EKDR NCPFY K GACR GDRCSR H P+ SPTLL+ +M+ M DP
Sbjct: 163 MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDAS 222
Query: 68 A-LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANAL 126
+I F DFYED+ E G++ + NL H+ GNVYVQ++ EE AL
Sbjct: 223 LEYSEEEIYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAAL 282
Query: 127 RNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL 173
NGR+YAGR + +F PVT ++ A C +E C RG +CNF+H+
Sbjct: 283 SLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 329
>gi|31455228|gb|AAH05915.1| U2 small nuclear RNA auxiliary factor 1 [Homo sapiens]
gi|312151474|gb|ADQ32249.1| U2 small nuclear RNA auxiliary factor 1 [synthetic construct]
Length = 167
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 68/113 (60%), Positives = 90/113 (79%), Gaps = 1/113 (0%)
Query: 74 IQDHFEDFYEDLFEEL-SKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGR 132
+Q+H+++F+E++F E+ KY E+E +N+CDNL DH+VGNVYV+FR EE A A+ +LN R
Sbjct: 1 MQEHYDEFFEEVFTEMEEKYREVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNR 60
Query: 133 FYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLF 185
++ G+PI + SPVTDFREA CRQYE C RGG+CNFMHLK ISRELRR L+
Sbjct: 61 WFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 113
>gi|355691520|gb|EHH26705.1| U2(RNU2) small nuclear RNA auxiliary factor 1-like 2 [Macaca
mulatta]
Length = 472
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 74/167 (44%), Positives = 95/167 (56%), Gaps = 4/167 (2%)
Query: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMIT---PGVDPQGQ 67
EKDR NCPFY K GACR GDRCSR H P+ SPTLL+ +M+ M DP
Sbjct: 163 MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDAS 222
Query: 68 A-LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANAL 126
+I F DFYED+ E G++ + NL H+ GNVYVQ++ EE AL
Sbjct: 223 LEYSEEEIYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAAL 282
Query: 127 RNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL 173
NGR+YAGR + +F PVT ++ A C +E C RG +CNF+H+
Sbjct: 283 SLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 329
>gi|291407124|ref|XP_002719965.1| PREDICTED: U2 small nuclear RNA auxiliary factor 1-like 2
[Oryctolagus cuniculus]
Length = 498
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/258 (36%), Positives = 123/258 (47%), Gaps = 32/258 (12%)
Query: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMIT---PGVDPQGQ 67
EKDR NCPFY K GACR GDRCSR H P+ SPTLL+ +M+ M DP
Sbjct: 168 MEKDRANCPFYNKTGACRFGDRCSRKHNFPASSPTLLIKSMFTTFGMEQCRRDDYDPDAS 227
Query: 68 A-LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANAL 126
+ F DFY+D+ E G++ + NL H+ GNVYVQ++ EE AL
Sbjct: 228 LEYSEEETYQQFLDFYDDVLPEFKNVGKVVQFKVSCNLEPHLRGNVYVQYQSEEECQTAL 287
Query: 127 RNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKK----------- 175
NGR+YAGR + +F PVT ++ A C +E C RG +CNF+H+ +
Sbjct: 288 SLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFRNPNNEFWEANR 347
Query: 176 ---ISRELRRRLFGRSRRRRSRSRSRSRSPHKYRGGYEERSHGGGRGSGRRDDDRDHRLH 232
+S + FG++ RR R+ GY + H GR RR DH
Sbjct: 348 DLYLSPDRTGSAFGKNSERRDRT------------GYHDEYH--GRLRRRRSPSADHSYK 393
Query: 233 GRGRRPRSRSPGRRGGRS 250
G R R RG +S
Sbjct: 394 RNGESERKRRSSHRGKKS 411
>gi|395821701|ref|XP_003784175.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Otolemur garnettii]
Length = 482
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 74/172 (43%), Positives = 97/172 (56%), Gaps = 4/172 (2%)
Query: 6 ASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMIT---PGV 62
A + EKDR NCPFY K GACR GDRCSR H P+ SPTLL+ +M+ M
Sbjct: 155 ADLRVVEKDRANCPFYSKTGACRFGDRCSRKHNFPASSPTLLIKSMFTTFGMEQCRRDDY 214
Query: 63 DP-QGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEH 121
DP G + F DFY+D+ E G++ + NL H+ GNVYVQ++ EE
Sbjct: 215 DPDAGLEYSEEETYQQFLDFYDDVLPEFKNVGKVIKFKVSCNLEPHLRGNVYVQYQSEEE 274
Query: 122 AANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL 173
AL NGR+YAGR + +F PVT ++ A C +E C RG +CNF+H+
Sbjct: 275 CQTALSVFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIKQCPRGRHCNFLHV 326
>gi|327268246|ref|XP_003218909.1| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Anolis carolinensis]
Length = 487
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/174 (41%), Positives = 96/174 (55%), Gaps = 14/174 (8%)
Query: 9 FGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDP---- 64
GTEKDR NCPFY K GACR GDRCSR H P+ S TLL+ M+ +T G++
Sbjct: 192 IGTEKDRANCPFYIKTGACRFGDRCSRKHNYPTSSQTLLIRGMF-----VTFGMEQCKRD 246
Query: 65 -----QGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREE 119
+I F DFYED+ E G++ + N H+ GNVYVQ++ E
Sbjct: 247 DYDTDASLEYSEEEIYQQFLDFYEDVLPEFKNVGKVVQFKVSCNFEPHLRGNVYVQYQSE 306
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL 173
+ AL NGR+YAGR + +F PVT ++ A C +E C RG +CNF+H+
Sbjct: 307 QECQEALTLFNGRWYAGRQLQCEFCPVTRWKTAICGLFERQKCPRGKHCNFLHV 360
>gi|397512928|ref|XP_003826785.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like isoform 1 [Pan
paniscus]
gi|397512932|ref|XP_003826787.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like isoform 3 [Pan
paniscus]
gi|397512934|ref|XP_003826788.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like isoform 4 [Pan
paniscus]
gi|410039576|ref|XP_003950650.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like [Pan troglodytes]
Length = 489
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/166 (43%), Positives = 94/166 (56%), Gaps = 4/166 (2%)
Query: 12 EKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMIT---PGVDPQGQA 68
EKDR NCPFY K GACR GDRCSR H P+ SPTLL+ +M+ M DP
Sbjct: 181 EKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASL 240
Query: 69 -LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALR 127
+ F DFYED+ E G++ + NL H+ GNVYVQ++ EE AL
Sbjct: 241 EFSEEETYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALS 300
Query: 128 NLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL 173
NGR+YAGR + +F PVT ++ A C +E C RG +CNF+H+
Sbjct: 301 LFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 346
>gi|345327120|ref|XP_001515642.2| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Ornithorhynchus
anatinus]
Length = 466
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 98/177 (55%), Gaps = 14/177 (7%)
Query: 6 ASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDP- 64
A + TEKDR NCPFY K G+CR GDRCSR H P++SPTLL+ +M+ IT G++
Sbjct: 159 ADVRITEKDRANCPFYIKTGSCRFGDRCSRKHNYPTLSPTLLIRSMF-----ITFGMEQC 213
Query: 65 --------QGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQF 116
+ F DFYED+ E G++ + N H+ GNVYVQ+
Sbjct: 214 RRDDYDTDASLEYSEEETYQQFLDFYEDVLPEFKNVGKVIQFKVSCNFEPHLRGNVYVQY 273
Query: 117 REEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL 173
+ EE A NGR+YAGR + +F PVT ++ A C +E C RG +CNF+H+
Sbjct: 274 QSEEECQEAFSLFNGRWYAGRQLQCEFCPVTRWKMAICGLFERQKCPRGKHCNFLHV 330
>gi|397512930|ref|XP_003826786.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like isoform 2 [Pan
paniscus]
Length = 504
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/167 (43%), Positives = 94/167 (56%), Gaps = 4/167 (2%)
Query: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMIT---PGVDPQGQ 67
EKDR NCPFY K GACR GDRCSR H P+ SPTLL+ +M+ M DP
Sbjct: 195 MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDAS 254
Query: 68 A-LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANAL 126
+ F DFYED+ E G++ + NL H+ GNVYVQ++ EE AL
Sbjct: 255 LEFSEEETYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAAL 314
Query: 127 RNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL 173
NGR+YAGR + +F PVT ++ A C +E C RG +CNF+H+
Sbjct: 315 SLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 361
>gi|355757207|gb|EHH60732.1| U2(RNU2) small nuclear RNA auxiliary factor 1-like 2 [Macaca
fascicularis]
Length = 467
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 73/166 (43%), Positives = 94/166 (56%), Gaps = 4/166 (2%)
Query: 12 EKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMIT---PGVDPQGQA 68
EKDR NCPFY K GACR GDRCSR H P+ SPTLL+ +M+ M DP
Sbjct: 153 EKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASL 212
Query: 69 -LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALR 127
+ F DFYED+ E G++ + NL H+ GNVYVQ++ EE AL
Sbjct: 213 EYSEEETYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALS 272
Query: 128 NLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL 173
NGR+YAGR + +F PVT ++ A C +E C RG +CNF+H+
Sbjct: 273 LFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 318
>gi|448097995|ref|XP_004198814.1| Piso0_002204 [Millerozyma farinosa CBS 7064]
gi|359380236|emb|CCE82477.1| Piso0_002204 [Millerozyma farinosa CBS 7064]
Length = 229
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 72/175 (41%), Positives = 112/175 (64%), Gaps = 1/175 (0%)
Query: 12 EKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDP 71
E ++ C FY KIGACRHG++CSR H KP+ S T+L+ N+Y+ P + Q +
Sbjct: 4 ENPKLICTFYTKIGACRHGEKCSRRHIKPTSSDTILMPNLYKNPKFSNNEANGQQVPITG 63
Query: 72 RK-IQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLN 130
K +Q HFEDFY+D+F + G+++++ +C+N +H+ GNVY++F + A +A+ LN
Sbjct: 64 EKELQQHFEDFYKDVFVRAATLGKVDAMVVCENNNNHLNGNVYIKFSSRDIAYDAVVKLN 123
Query: 131 GRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLF 185
+Y GRP+ + SPV +A CR Y+ N C+RG +CNFMH+++ S L+ LF
Sbjct: 124 QEWYDGRPVYCELSPVESLSDANCRAYDTNSCSRGDHCNFMHIRRPSPGLKNFLF 178
>gi|255573856|ref|XP_002527847.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus
communis]
gi|223532771|gb|EEF34550.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus
communis]
Length = 857
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 110/178 (61%), Gaps = 8/178 (4%)
Query: 1 MAEHLASI---FGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDM 57
M E++A FGTE+D+ +CPF+ K GACR G RCSR+H P + TLL+ NMY P +
Sbjct: 201 MLENVAQQIPNFGTEQDKAHCPFHLKTGACRFGQRCSRVHFYPDKANTLLMKNMYNGPGL 260
Query: 58 ITPGVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFR 117
+G +++ +E+FYED+ E KYGEI + +C N + H+ GNVYVQ++
Sbjct: 261 AWEQ--DEGLEHTDEEVERSYEEFYEDVHTEFLKYGEIVNFKVCKNSSFHLRGNVYVQYK 318
Query: 118 EEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEEN---VCNRGGYCNFMH 172
+ A A ++NGR++AG+ + +F VT ++ A C +Y ++ +C+RG CNF+H
Sbjct: 319 SLDSAVLAYCSINGRYFAGKQVNCEFVNVTRWKVAICGEYMKSRLQMCSRGTACNFIH 376
>gi|332223957|ref|XP_003261134.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 isoform 1 [Nomascus
leucogenys]
Length = 478
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 73/167 (43%), Positives = 94/167 (56%), Gaps = 4/167 (2%)
Query: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMIT---PGVDPQGQ 67
EKDR NCPFY K GACR GDRCSR H P+ SPTLL+ +M+ M DP
Sbjct: 165 MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDAS 224
Query: 68 A-LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANAL 126
+ F DFYED+ E G++ + NL H+ GNVYVQ++ EE AL
Sbjct: 225 LEYSEEETYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAAL 284
Query: 127 RNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL 173
NGR+YAGR + +F PVT ++ A C +E C RG +CNF+H+
Sbjct: 285 SLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 331
>gi|426395275|ref|XP_004063900.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like [Gorilla gorilla
gorilla]
Length = 461
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 73/167 (43%), Positives = 94/167 (56%), Gaps = 4/167 (2%)
Query: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMIT---PGVDPQGQ 67
EKDR NCPFY K GACR GDRCSR H P+ SPTLL+ +M+ M DP
Sbjct: 152 MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDAS 211
Query: 68 A-LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANAL 126
+ F DFYED+ E G++ + NL H+ GNVYVQ++ EE AL
Sbjct: 212 LEYSEEETYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAAL 271
Query: 127 RNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL 173
NGR+YAGR + +F PVT ++ A C +E C RG +CNF+H+
Sbjct: 272 SLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 318
>gi|395736068|ref|XP_002815836.2| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like [Pongo abelii]
Length = 489
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 104/270 (38%), Positives = 133/270 (49%), Gaps = 36/270 (13%)
Query: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMIT---PGVDPQGQ 67
EKDR NCPFY K GACR GDRCSR H P+ SPTLL+ +M+ M DP
Sbjct: 180 MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDAS 239
Query: 68 A-LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANAL 126
+ F DFYED+ E G++ + NL H+ GNVYVQ++ EE AL
Sbjct: 240 LEYSEEETYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAAL 299
Query: 127 RNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKK----------- 175
NGR+YAGR + +F PVT ++ A C +E C RG +CNF+H+ +
Sbjct: 300 SLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFRNPNNEFWEANR 359
Query: 176 ---ISRELRRRLFGRSRRRRSR--------SRSRSR---SP-HKY-RGGYEER---SHGG 216
+S + FG++ RR + SR R R SP H Y R G ER SH G
Sbjct: 360 DIYLSPDQTGSSFGKNSERREKMGHHDDYYSRQRGRRNPSPDHSYKRNGESERKRSSHRG 419
Query: 217 GRGSGRRDDDRD-HRLHGRGR-RPRSRSPG 244
+ R R+ H RGR R RSR G
Sbjct: 420 KKSHKRTSKSRERHNSPSRGRNRHRSRDQG 449
>gi|1125020|dbj|BAA08532.1| U2AF1-RS1 [Homo sapiens]
Length = 479
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 73/166 (43%), Positives = 94/166 (56%), Gaps = 4/166 (2%)
Query: 12 EKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMIT---PGVDPQGQA 68
EKDR NCPFY K GACR GDRCSR H P+ SPTLL+ +M+ M DP
Sbjct: 171 EKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASL 230
Query: 69 -LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALR 127
+ F DFYED+ E G++ + NL H+ GNVYVQ++ EE AL
Sbjct: 231 EYSEEETYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALS 290
Query: 128 NLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL 173
NGR+YAGR + +F PVT ++ A C +E C RG +CNF+H+
Sbjct: 291 LFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 336
>gi|2833265|sp|Q15695.2|U2AFL_HUMAN RecName: Full=U2 small nuclear ribonucleoprotein auxiliary factor
35 kDa subunit-related protein 1; AltName: Full=CCCH
type zinc finger, RNA-binding motif and serine/arginine
rich protein 1; AltName: Full=U2(RNU2) small nuclear RNA
auxiliary factor 1-like 1
gi|1293653|gb|AAA98669.1| U2AFBPL [Homo sapiens]
Length = 479
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 73/166 (43%), Positives = 94/166 (56%), Gaps = 4/166 (2%)
Query: 12 EKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMIT---PGVDPQGQA 68
EKDR NCPFY K GACR GDRCSR H P+ SPTLL+ +M+ M DP
Sbjct: 171 EKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASL 230
Query: 69 -LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALR 127
+ F DFYED+ E G++ + NL H+ GNVYVQ++ EE AL
Sbjct: 231 EYSEEETYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALS 290
Query: 128 NLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL 173
NGR+YAGR + +F PVT ++ A C +E C RG +CNF+H+
Sbjct: 291 LFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 336
>gi|297303397|ref|XP_001116975.2| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Macaca mulatta]
Length = 479
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 73/167 (43%), Positives = 94/167 (56%), Gaps = 4/167 (2%)
Query: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMIT---PGVDPQGQ 67
EKDR NCPFY K GACR GDRCSR H P+ SPTLL+ +M+ M DP
Sbjct: 164 MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDAS 223
Query: 68 A-LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANAL 126
+ F DFYED+ E G++ + NL H+ GNVYVQ++ EE AL
Sbjct: 224 LEYSEEETYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAAL 283
Query: 127 RNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL 173
NGR+YAGR + +F PVT ++ A C +E C RG +CNF+H+
Sbjct: 284 SLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 330
>gi|189069316|dbj|BAG36348.1| unnamed protein product [Homo sapiens]
Length = 479
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 73/166 (43%), Positives = 94/166 (56%), Gaps = 4/166 (2%)
Query: 12 EKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMIT---PGVDPQGQA 68
EKDR NCPFY K GACR GDRCSR H P+ SPTLL+ +M+ M DP
Sbjct: 171 EKDRANCPFYSKTGACRFGDRCSRRHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASL 230
Query: 69 -LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALR 127
+ F DFYED+ E G++ + NL H+ GNVYVQ++ EE AL
Sbjct: 231 EYSEEETYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALS 290
Query: 128 NLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL 173
NGR+YAGR + +F PVT ++ A C +E C RG +CNF+H+
Sbjct: 291 LFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 336
>gi|119619307|gb|EAW98901.1| U2(RNU2) small nuclear RNA auxiliary factor 1-like 2, isoform CRA_b
[Homo sapiens]
Length = 446
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 73/167 (43%), Positives = 94/167 (56%), Gaps = 4/167 (2%)
Query: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMIT---PGVDPQGQ 67
EKDR NCPFY K GACR GDRCSR H P+ SPTLL+ +M+ M DP
Sbjct: 162 MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDAS 221
Query: 68 A-LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANAL 126
+ F DFYED+ E G++ + NL H+ GNVYVQ++ EE AL
Sbjct: 222 LEYSEEETYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAAL 281
Query: 127 RNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL 173
NGR+YAGR + +F PVT ++ A C +E C RG +CNF+H+
Sbjct: 282 SLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 328
>gi|332223959|ref|XP_003261135.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 isoform 2 [Nomascus
leucogenys]
Length = 482
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 73/167 (43%), Positives = 94/167 (56%), Gaps = 4/167 (2%)
Query: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMIT---PGVDPQGQ 67
EKDR NCPFY K GACR GDRCSR H P+ SPTLL+ +M+ M DP
Sbjct: 165 MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDAS 224
Query: 68 A-LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANAL 126
+ F DFYED+ E G++ + NL H+ GNVYVQ++ EE AL
Sbjct: 225 LEYSEEETYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAAL 284
Query: 127 RNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL 173
NGR+YAGR + +F PVT ++ A C +E C RG +CNF+H+
Sbjct: 285 SLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 331
>gi|296234985|ref|XP_002762699.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Callithrix jacchus]
Length = 474
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 73/167 (43%), Positives = 94/167 (56%), Gaps = 4/167 (2%)
Query: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMIT---PGVDPQGQ 67
EKDR NCPFY K GACR GDRCSR H P+ SPTLL+ +M+ M DP
Sbjct: 165 MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDAS 224
Query: 68 A-LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANAL 126
+ F DFYED+ E G++ + NL H+ GNVYVQ++ EE AL
Sbjct: 225 LEYSEEETYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAAL 284
Query: 127 RNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL 173
NGR+YAGR + +F PVT ++ A C +E C RG +CNF+H+
Sbjct: 285 SLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 331
>gi|402909571|ref|XP_003917490.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Papio anubis]
Length = 480
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 73/167 (43%), Positives = 94/167 (56%), Gaps = 4/167 (2%)
Query: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMIT---PGVDPQGQ 67
EKDR NCPFY K GACR GDRCSR H P+ SPTLL+ +M+ M DP
Sbjct: 165 MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDAS 224
Query: 68 A-LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANAL 126
+ F DFYED+ E G++ + NL H+ GNVYVQ++ EE AL
Sbjct: 225 LEYSEEETYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAAL 284
Query: 127 RNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL 173
NGR+YAGR + +F PVT ++ A C +E C RG +CNF+H+
Sbjct: 285 SLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 331
>gi|4827046|ref|NP_005080.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2 [Homo sapiens]
gi|2833266|sp|Q15696.2|U2AFM_HUMAN RecName: Full=U2 small nuclear ribonucleoprotein auxiliary factor
35 kDa subunit-related protein 2; AltName: Full=CCCH
type zinc finger, RNA-binding motif and serine/arginine
rich protein 2; AltName: Full=Renal carcinoma antigen
NY-REN-20; AltName: Full=U2(RNU2) small nuclear RNA
auxiliary factor 1-like 2; AltName: Full=U2AF35-related
protein; Short=URP
gi|1808582|dbj|BAA08533.1| U2AF1-RS2 [Homo sapiens]
gi|109731267|gb|AAI13455.1| Zinc finger (CCCH type), RNA-binding motif and serine/arginine rich
2 [Homo sapiens]
gi|109731281|gb|AAI13481.1| Zinc finger (CCCH type), RNA-binding motif and serine/arginine rich
2 [Homo sapiens]
gi|119619306|gb|EAW98900.1| U2(RNU2) small nuclear RNA auxiliary factor 1-like 2, isoform CRA_a
[Homo sapiens]
gi|313883686|gb|ADR83329.1| zinc finger (CCCH type), RNA-binding motif and serine/arginine rich
2 [synthetic construct]
Length = 482
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 73/167 (43%), Positives = 94/167 (56%), Gaps = 4/167 (2%)
Query: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMIT---PGVDPQGQ 67
EKDR NCPFY K GACR GDRCSR H P+ SPTLL+ +M+ M DP
Sbjct: 165 MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDAS 224
Query: 68 A-LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANAL 126
+ F DFYED+ E G++ + NL H+ GNVYVQ++ EE AL
Sbjct: 225 LEYSEEETYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAAL 284
Query: 127 RNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL 173
NGR+YAGR + +F PVT ++ A C +E C RG +CNF+H+
Sbjct: 285 SLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 331
>gi|332860347|ref|XP_520951.3| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 isoform 2 [Pan
troglodytes]
Length = 478
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 73/167 (43%), Positives = 94/167 (56%), Gaps = 4/167 (2%)
Query: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMIT---PGVDPQGQ 67
EKDR NCPFY K GACR GDRCSR H P+ SPTLL+ +M+ M DP
Sbjct: 165 MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDAS 224
Query: 68 A-LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANAL 126
+ F DFYED+ E G++ + NL H+ GNVYVQ++ EE AL
Sbjct: 225 LEYSEEETYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAAL 284
Query: 127 RNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL 173
NGR+YAGR + +F PVT ++ A C +E C RG +CNF+H+
Sbjct: 285 SLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 331
>gi|297709488|ref|XP_002831462.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Pongo abelii]
Length = 478
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 73/167 (43%), Positives = 94/167 (56%), Gaps = 4/167 (2%)
Query: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMIT---PGVDPQGQ 67
EKDR NCPFY K GACR GDRCSR H P+ SPTLL+ +M+ M DP
Sbjct: 165 MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDAS 224
Query: 68 A-LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANAL 126
+ F DFYED+ E G++ + NL H+ GNVYVQ++ EE AL
Sbjct: 225 LEYSEEETYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAAL 284
Query: 127 RNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL 173
NGR+YAGR + +F PVT ++ A C +E C RG +CNF+H+
Sbjct: 285 SLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 331
>gi|127797587|gb|AAH50451.2| Zinc finger (CCCH type), RNA-binding motif and serine/arginine rich
2 [Homo sapiens]
Length = 482
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 73/167 (43%), Positives = 94/167 (56%), Gaps = 4/167 (2%)
Query: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMIT---PGVDPQGQ 67
EKDR NCPFY K GACR GDRCSR H P+ SPTLL+ +M+ M DP
Sbjct: 165 MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDAS 224
Query: 68 A-LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANAL 126
+ F DFYED+ E G++ + NL H+ GNVYVQ++ EE AL
Sbjct: 225 LEYSEEETYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAAL 284
Query: 127 RNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL 173
NGR+YAGR + +F PVT ++ A C +E C RG +CNF+H+
Sbjct: 285 SLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 331
>gi|343958430|dbj|BAK63070.1| signal recognition particle 19kDa [Pan troglodytes]
Length = 310
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 101/272 (37%), Positives = 132/272 (48%), Gaps = 38/272 (13%)
Query: 12 EKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP---GVDPQGQA 68
EKDR NCPFY K GACR GDRCSR H P+ SPTLL+ +M+ M DP
Sbjct: 2 EKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASL 61
Query: 69 -LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALR 127
+ F DFYED+ E G++ + NL H+ GNVYVQ++ EE AL
Sbjct: 62 EFSEEETYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALS 121
Query: 128 NLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKK------------ 175
NGR++AGR + +F PVT ++ A C +E C RG +CNF+H+ +
Sbjct: 122 LFNGRWHAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFRNPNNEFWEANRD 181
Query: 176 --ISRELRRRLFGRSRRRRSR--------SRSRSR---SP-HKY-RGGYEERSHGGGRGS 220
+S + FG++ RR + SR R R SP H Y R G ER RG
Sbjct: 182 IYLSPDQTGSSFGKNSERREKMGHHDHYCSRQRGRRNPSPDHTYKRNGESERKKSSHRGK 241
Query: 221 GRRDDDRDHRLHGRGRRPRSRSPGRRGGRSRS 252
+ H+ + R R SP R G R RS
Sbjct: 242 ------KSHKRTSKSRE-RHNSPSRGGNRHRS 266
>gi|348554507|ref|XP_003463067.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Cavia porcellus]
Length = 490
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 103/280 (36%), Positives = 136/280 (48%), Gaps = 38/280 (13%)
Query: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMIT---PGVDPQGQ 67
EKDR NCPFY K GACR GDRCSR H P+ SPTLL+ +M+ M DP
Sbjct: 164 MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIRSMFTTFGMEQCRRDDYDPDAS 223
Query: 68 A-LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANAL 126
+ F DFY+D+ E G++ + NL H+ GNVYVQ++ EE AL
Sbjct: 224 LEYSEEETYQQFLDFYDDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAAL 283
Query: 127 RNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKK----------- 175
NGR+YAGR + +F PVT ++ A C +E C RG +CNF+H+ +
Sbjct: 284 SLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFRNPNNEFWEANR 343
Query: 176 ---ISRELRRRLFGRSRRRRSRS-----------RSRSRSP-HKYR--GGYEERSHGGGR 218
+S + FG++ R R+ R RS SP H Y+ G E + G R
Sbjct: 344 DLYLSPDRTGSSFGKNLDRGKRAGHHDDYYGRTRRRRSPSPDHSYKRNGESERKRRSGHR 403
Query: 219 GSGRRDDDRDHRLHGRGRRPRSRSPGRRGGRSRSPGARRR 258
G R H H SRS GR+ RSRS G++ R
Sbjct: 404 GKKAHKRSRSHERHS------SRSRGRKRNRSRSRGSQMR 437
>gi|332860349|ref|XP_003317416.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 isoform 1 [Pan
troglodytes]
Length = 482
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 73/167 (43%), Positives = 94/167 (56%), Gaps = 4/167 (2%)
Query: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMIT---PGVDPQGQ 67
EKDR NCPFY K GACR GDRCSR H P+ SPTLL+ +M+ M DP
Sbjct: 165 MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDAS 224
Query: 68 A-LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANAL 126
+ F DFYED+ E G++ + NL H+ GNVYVQ++ EE AL
Sbjct: 225 LEYSEEETYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAAL 284
Query: 127 RNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL 173
NGR+YAGR + +F PVT ++ A C +E C RG +CNF+H+
Sbjct: 285 SLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 331
>gi|301617734|ref|XP_002938300.1| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Xenopus (Silurana)
tropicalis]
Length = 529
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 73/175 (41%), Positives = 98/175 (56%), Gaps = 12/175 (6%)
Query: 9 FGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMY--------QRPDMITP 60
+GTEKDR NCPFY K GACR G+RCSR H PS S TLL+ +M+ +R D T
Sbjct: 152 YGTEKDRANCPFYLKTGACRFGERCSRKHNYPSSSQTLLIRSMFVTFGMEQCRRDDYDTD 211
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
G+ +I F +FY D+ E G++ + N H+ GNVYVQ++ EE
Sbjct: 212 ASLEYGEE----EIYQQFLEFYADVVPEFKNAGKVVQFKVSCNFEPHLRGNVYVQYQTEE 267
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKK 175
A NGR+YA R + +FSPVT ++ A C +E C RG +CNF+H+ K
Sbjct: 268 ECLKAFTQFNGRWYASRQLQCEFSPVTRWKTAICGLFERQKCPRGKHCNFLHVFK 322
>gi|449680951|ref|XP_002158120.2| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Hydra
magnipapillata]
Length = 403
Score = 147 bits (370), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 68/172 (39%), Positives = 100/172 (58%), Gaps = 4/172 (2%)
Query: 6 ASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQ 65
+ +FGTE D NC FY K GACR G RCSR+H K SPT+L+ N + + P ++ +
Sbjct: 44 SDMFGTEMDPRNCKFYIKTGACRFGPRCSRIHLKFDNSPTILIQNFFTDARLAIPMLNER 103
Query: 66 ----GQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEH 121
G D + FE FY+D+ E G + C N H+ GNVYVQ+++
Sbjct: 104 NNDFGLEYDEVDLIHEFEKFYDDVIGEFRAAGTVVMFKCCQNYVPHLRGNVYVQYQDHNG 163
Query: 122 AANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL 173
A AL+ NGR+YAGR + V+ SPVT+++ + C +++ +C RG CNF+H+
Sbjct: 164 ALRALKMFNGRWYAGRQLSVELSPVTNWKSSICGLFDKRLCPRGKACNFLHV 215
>gi|410988239|ref|XP_004000394.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Felis catus]
Length = 519
Score = 147 bits (370), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 73/167 (43%), Positives = 94/167 (56%), Gaps = 4/167 (2%)
Query: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMIT---PGVDPQGQ 67
EKDR NCPFY K GACR GDRCSR H PS SPTLL+ +M+ M DP
Sbjct: 219 MEKDRANCPFYSKTGACRFGDRCSRKHNFPSSSPTLLIKSMFTTFGMEQCRRDDYDPDAS 278
Query: 68 A-LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANAL 126
+ F DFY+D+ E G++ + NL H+ GNVYVQ++ EE AL
Sbjct: 279 LEYSEEETYQQFLDFYDDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAAL 338
Query: 127 RNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL 173
NGR+YAGR + +F PVT ++ A C +E C RG +CNF+H+
Sbjct: 339 SLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 385
>gi|15218489|ref|NP_172503.1| zinc finger CCCH domain-containing protein 5 [Arabidopsis thaliana]
gi|229621703|sp|Q9SY74.2|C3H5_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 5;
Short=AtC3H5
gi|332190444|gb|AEE28565.1| zinc finger CCCH domain-containing protein 5 [Arabidopsis thaliana]
Length = 757
Score = 147 bits (370), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 70/167 (41%), Positives = 106/167 (63%), Gaps = 5/167 (2%)
Query: 9 FGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQA 68
FGTE+D+ +CPF+ K GACR G RCSR+H P+ S TLL+ NMY P IT D +G
Sbjct: 237 FGTEQDKAHCPFHLKTGACRFGQRCSRVHFYPNKSCTLLMKNMYNGPG-ITWEQD-EGLE 294
Query: 69 LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRN 128
+ + +E+FYED+ E KYGE+ + +C N + H+ GNVYV +R E A A ++
Sbjct: 295 YTDEEAELCYEEFYEDVHTEFLKYGELVNFKVCRNGSFHLKGNVYVHYRSLESAILAYQS 354
Query: 129 LNGRFYAGRPIIVDFSPVTDFREATCRQYEEN---VCNRGGYCNFMH 172
+NGR++AG+ + +F ++ ++ A C +Y ++ C+RG CNF+H
Sbjct: 355 INGRYFAGKQVNCEFVNISRWKVAICGEYMKSRLKTCSRGSACNFIH 401
>gi|194227695|ref|XP_001490095.2| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Equus caballus]
Length = 470
Score = 147 bits (370), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 72/167 (43%), Positives = 94/167 (56%), Gaps = 4/167 (2%)
Query: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMIT---PGVDPQGQ 67
EKDR NCPFY K GACR GDRCSR H P+ SPTLL+ +M+ M DP
Sbjct: 163 MEKDRANCPFYSKTGACRFGDRCSRKHNFPASSPTLLIRSMFTTFGMEQCRRDDYDPDAS 222
Query: 68 A-LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANAL 126
+ F DFY+D+ E G++ + NL H+ GNVYVQ++ EE AL
Sbjct: 223 LEYSEEETYQQFLDFYDDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQTAL 282
Query: 127 RNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL 173
NGR+YAGR + +F PVT ++ A C +E C RG +CNF+H+
Sbjct: 283 SLFNGRWYAGRQLQCEFCPVTQWKMAICGLFEIQQCPRGKHCNFLHV 329
>gi|301788732|ref|XP_002929785.1| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Ailuropoda
melanoleuca]
Length = 464
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 73/167 (43%), Positives = 94/167 (56%), Gaps = 4/167 (2%)
Query: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMIT---PGVDPQGQ 67
EKDR NCPFY K GACR GDRCSR H PS SPTLL+ +M+ M DP
Sbjct: 164 MEKDRANCPFYSKTGACRFGDRCSRKHNFPSSSPTLLIKSMFTTFGMEQCRRDDYDPDAS 223
Query: 68 A-LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANAL 126
+ F DFY+D+ E G++ + NL H+ GNVYVQ++ EE AL
Sbjct: 224 LEYSEEETYQQFLDFYDDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAAL 283
Query: 127 RNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL 173
NGR+YAGR + +F PVT ++ A C +E C RG +CNF+H+
Sbjct: 284 SLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 330
>gi|359392832|gb|AEV45823.1| rough endosperm 3-umu1 alpha isoform [Zea mays]
Length = 790
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 101/167 (60%), Gaps = 5/167 (2%)
Query: 9 FGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQA 68
FGTE+D+ +CPF+ K GACR G RCSR+H P S TLL+ NMY P + +G
Sbjct: 252 FGTEQDKAHCPFHLKTGACRFGLRCSRVHFYPDKSITLLMKNMYNGPGLALE--QDEGLE 309
Query: 69 LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRN 128
+I+ +E+FYED+ E K+GE+ + +C N + H+ GNVYV ++ + A A +
Sbjct: 310 FTDEEIEQSYEEFYEDVHTEFLKFGELVNFKVCRNGSFHLRGNVYVHYKSLDSALLAYSS 369
Query: 129 LNGRFYAGRPIIVDFSPVTDFREATCRQYEEN---VCNRGGYCNFMH 172
+NGR++AG+ I +F VT ++ A C +Y + C+ G CNF+H
Sbjct: 370 MNGRYFAGKQITCEFVAVTRWKAAICGEYMRSRYKTCSHGVACNFIH 416
>gi|363543273|ref|NP_001241852.1| RGH3 splicing factor [Zea mays]
gi|330470888|gb|AEC32092.1| RGH3 splicing factor [Zea mays]
gi|356609668|gb|AET25330.1| RGH3/ZmURP alpha protein isoform [Zea mays]
gi|359392836|gb|AEV45825.1| rough endosperm 3 alpha isoform [Zea mays]
Length = 755
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 101/167 (60%), Gaps = 5/167 (2%)
Query: 9 FGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQA 68
FGTE+D+ +CPF+ K GACR G RCSR+H P S TLL+ NMY P + +G
Sbjct: 217 FGTEQDKAHCPFHLKTGACRFGLRCSRVHFYPDKSITLLMKNMYNGPGLALE--QDEGLE 274
Query: 69 LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRN 128
+I+ +E+FYED+ E K+GE+ + +C N + H+ GNVYV ++ + A A +
Sbjct: 275 FTDEEIEQSYEEFYEDVHTEFLKFGELVNFKVCRNGSFHLRGNVYVHYKSLDSALLAYSS 334
Query: 129 LNGRFYAGRPIIVDFSPVTDFREATCRQYEEN---VCNRGGYCNFMH 172
+NGR++AG+ I +F VT ++ A C +Y + C+ G CNF+H
Sbjct: 335 MNGRYFAGKQITCEFVAVTRWKAAICGEYMRSRYKTCSHGVACNFIH 381
>gi|281340363|gb|EFB15947.1| hypothetical protein PANDA_020065 [Ailuropoda melanoleuca]
Length = 398
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/167 (43%), Positives = 94/167 (56%), Gaps = 4/167 (2%)
Query: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP---GVDPQGQ 67
EKDR NCPFY K GACR GDRCSR H PS SPTLL+ +M+ M DP
Sbjct: 98 MEKDRANCPFYSKTGACRFGDRCSRKHNFPSSSPTLLIKSMFTTFGMEQCRRDDYDPDAS 157
Query: 68 A-LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANAL 126
+ F DFY+D+ E G++ + NL H+ GNVYVQ++ EE AL
Sbjct: 158 LEYSEEETYQQFLDFYDDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAAL 217
Query: 127 RNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL 173
NGR+YAGR + +F PVT ++ A C +E C RG +CNF+H+
Sbjct: 218 SLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 264
>gi|355731037|gb|AES10395.1| zinc finger , RNA-binding motif and serine/arginine rich 2 [Mustela
putorius furo]
Length = 463
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/167 (43%), Positives = 94/167 (56%), Gaps = 4/167 (2%)
Query: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMIT---PGVDPQGQ 67
EKDR NCPFY K GACR GDRCSR H PS SPTLL+ +M+ M DP
Sbjct: 164 MEKDRANCPFYSKTGACRFGDRCSRKHNFPSSSPTLLIKSMFTTFGMEQCRRDDYDPDAS 223
Query: 68 A-LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANAL 126
+ F DFY+D+ E G++ + NL H+ GNVYVQ++ EE AL
Sbjct: 224 LEYSEEETYQQFLDFYDDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAAL 283
Query: 127 RNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL 173
NGR+YAGR + +F PVT ++ A C +E C RG +CNF+H+
Sbjct: 284 SLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 330
>gi|335305731|ref|XP_001926829.3| PREDICTED: LOW QUALITY PROTEIN: U2 small nuclear ribonucleoprotein
auxiliary factor 35 kDa subunit-related protein 2 [Sus
scrofa]
Length = 485
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 72/167 (43%), Positives = 94/167 (56%), Gaps = 4/167 (2%)
Query: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMIT---PGVDPQGQ 67
EKDR NCPFY K GACR GDRCSR H P+ SPTLL+ +M+ M DP
Sbjct: 172 MEKDRANCPFYSKTGACRFGDRCSRKHNFPASSPTLLIKSMFTTFGMEQCRRDDYDPDAS 231
Query: 68 A-LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANAL 126
+ F DFY+D+ E G++ + NL H+ GNVYVQ++ EE AL
Sbjct: 232 LEYSEEETYQQFLDFYDDVLPEFKNVGKVVQFKVSCNLEPHLRGNVYVQYQSEEECQAAL 291
Query: 127 RNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL 173
NGR+YAGR + +F PVT ++ A C +E C RG +CNF+H+
Sbjct: 292 ALFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 338
>gi|119619308|gb|EAW98902.1| U2(RNU2) small nuclear RNA auxiliary factor 1-like 2, isoform CRA_c
[Homo sapiens]
Length = 344
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/166 (43%), Positives = 94/166 (56%), Gaps = 4/166 (2%)
Query: 12 EKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMIT---PGVDPQGQA 68
EKDR NCPFY K GACR GDRCSR H P+ SPTLL+ +M+ M DP
Sbjct: 28 EKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASL 87
Query: 69 -LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALR 127
+ F DFYED+ E G++ + NL H+ GNVYVQ++ EE AL
Sbjct: 88 EYSEEETYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALS 147
Query: 128 NLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL 173
NGR+YAGR + +F PVT ++ A C +E C RG +CNF+H+
Sbjct: 148 LFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 193
>gi|356528629|ref|XP_003532902.1| PREDICTED: zinc finger CCCH domain-containing protein 5-like
[Glycine max]
Length = 587
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 101/167 (60%), Gaps = 3/167 (1%)
Query: 9 FGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQA 68
FGTE+D+ +CPF+ K GACR G RCSR+H P S TLL+ NMY P + +G
Sbjct: 167 FGTEQDKAHCPFHLKTGACRFGIRCSRVHFYPDKSSTLLIKNMYSGPGLACDQDQDEGLE 226
Query: 69 LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRN 128
+++ FE+FYED+ E K+GEI + +C N + H+ GNVYVQ++ + A A
Sbjct: 227 YTDEEVERCFEEFYEDVHTEFLKFGEIVNFKVCKNGSFHLRGNVYVQYKSLDSALLAYNT 286
Query: 129 LNGRFYAGRPIIVDFSPVTDFREATCRQYEEN---VCNRGGYCNFMH 172
+NGR++AG+ + F +T ++ A C +Y ++ C+ G CNF+H
Sbjct: 287 VNGRYFAGKQVSCQFVNLTRWKVAICGEYMKSGFKTCSHGTTCNFIH 333
>gi|426257963|ref|XP_004023719.1| PREDICTED: LOW QUALITY PROTEIN: U2 small nuclear ribonucleoprotein
auxiliary factor 35 kDa subunit-related protein 2-like
[Ovis aries]
Length = 502
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 72/167 (43%), Positives = 94/167 (56%), Gaps = 4/167 (2%)
Query: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMIT---PGVDPQGQ 67
EKDR NCPFY K GACR GDRCSR H P+ SPTLL+ +M+ M DP
Sbjct: 193 MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDAS 252
Query: 68 A-LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANAL 126
+ F DFY+D+ E G++ + NL H+ GNVYVQ++ EE AL
Sbjct: 253 LEYSEEETYQQFLDFYDDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAAL 312
Query: 127 RNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL 173
NGR+YAGR + +F PVT ++ A C +E C RG +CNF+H+
Sbjct: 313 SLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 359
>gi|358420032|ref|XP_003584397.1| PREDICTED: LOW QUALITY PROTEIN: U2 small nuclear ribonucleoprotein
auxiliary factor 35 kDa subunit-related protein 2 [Bos
taurus]
gi|359082042|ref|XP_003588252.1| PREDICTED: LOW QUALITY PROTEIN: U2 small nuclear ribonucleoprotein
auxiliary factor 35 kDa subunit-related protein 2 [Bos
taurus]
Length = 477
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 72/167 (43%), Positives = 94/167 (56%), Gaps = 4/167 (2%)
Query: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMIT---PGVDPQGQ 67
EKDR NCPFY K GACR GDRCSR H P+ SPTLL+ +M+ M DP
Sbjct: 168 MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDAS 227
Query: 68 A-LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANAL 126
+ F DFY+D+ E G++ + NL H+ GNVYVQ++ EE AL
Sbjct: 228 LEYSEEETYQQFLDFYDDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAAL 287
Query: 127 RNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL 173
NGR+YAGR + +F PVT ++ A C +E C RG +CNF+H+
Sbjct: 288 SLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 334
>gi|357142577|ref|XP_003572619.1| PREDICTED: zinc finger CCCH domain-containing protein 16-like
[Brachypodium distachyon]
Length = 748
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/167 (39%), Positives = 100/167 (59%), Gaps = 5/167 (2%)
Query: 9 FGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQA 68
FGTE+D+ +CPFY K ACR G RCSR+H P S TLL+ NMY P + +G
Sbjct: 203 FGTEQDKAHCPFYLKTAACRFGVRCSRVHFYPDKSCTLLMKNMYNGPGLALE--QDEGLE 260
Query: 69 LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRN 128
+++ +E+FYED+ E K+GE+ + +C N + H+ GNVYV ++ + A A +
Sbjct: 261 FTDEEVEQSYEEFYEDVHTEFLKFGELVNFKVCRNGSFHLRGNVYVHYKSLDSALLAYNS 320
Query: 129 LNGRFYAGRPIIVDFSPVTDFREATCRQYEEN---VCNRGGYCNFMH 172
+NGR++AG+ I +F VT ++ A C +Y + C+ G CNF+H
Sbjct: 321 MNGRYFAGKQITCEFVAVTKWKAAICGEYMRSRFKTCSHGVACNFIH 367
>gi|397467387|ref|XP_003805402.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Pan paniscus]
Length = 478
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/167 (43%), Positives = 93/167 (55%), Gaps = 4/167 (2%)
Query: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMIT---PGVDPQGQ 67
EKDR NCPFY K GACR GDRCSR H P+ SPTLL+ +M+ M DP
Sbjct: 165 MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDAS 224
Query: 68 A-LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANAL 126
+ F DFYED+ E G++ + NL H+ GNVYVQ++ EE A
Sbjct: 225 LEYSEEETYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAAF 284
Query: 127 RNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL 173
NGR+YAGR + +F PVT ++ A C +E C RG +CNF+H+
Sbjct: 285 SLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 331
>gi|255730573|ref|XP_002550211.1| hypothetical protein CTRG_04509 [Candida tropicalis MYA-3404]
gi|240132168|gb|EER31726.1| hypothetical protein CTRG_04509 [Candida tropicalis MYA-3404]
Length = 293
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 115/214 (53%), Gaps = 41/214 (19%)
Query: 13 KDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRP------------DMITP 60
++ V C FY +IGACRHG+ CS+ H +P+ S T++L+N+YQ P + + P
Sbjct: 30 ENLVVCLFYTRIGACRHGENCSKKHIRPNSSNTIMLANLYQNPKVKKSNNTDNGSEQLIP 89
Query: 61 GVDP---------------------------QGQALDP--RKIQDHFEDFYEDLFEELSK 91
+ + +DP +IQ++F+ FY D+F +S+
Sbjct: 90 ASESGKTEVEMANEEEPQEDKEEKSQQQKEVEESEVDPTEEEIQEYFDQFYADVFVHISQ 149
Query: 92 YGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVDFSPVTDFRE 151
I L++C+N DH+ GNVYVQF EE A R LN ++ RP+ + SPV+DF E
Sbjct: 150 MRPIYKLSVCENQNDHLNGNVYVQFFSEEDAGFVNRQLNSEWFNERPVYSELSPVSDFEE 209
Query: 152 ATCRQYEENVCNRGGYCNFMHLKKISRELRRRLF 185
A CR Y+ C+RGG CN+MH+++ + EL LF
Sbjct: 210 AHCRAYDNGGCDRGGRCNYMHVRQPTEELFDELF 243
>gi|441598673|ref|XP_004087475.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1 [Nomascus leucogenys]
gi|441598677|ref|XP_004087476.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1 [Nomascus leucogenys]
Length = 492
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/167 (43%), Positives = 93/167 (55%), Gaps = 4/167 (2%)
Query: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMIT---PGVDPQGQ 67
EKDR NCPFY K GACR G RCSR H P+ SPTLL+ +M+ M DP
Sbjct: 180 MEKDRANCPFYSKTGACRFGHRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDAS 239
Query: 68 A-LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANAL 126
+ F DFYED+ E G++ + NL H+ GNVYVQ++ EE AL
Sbjct: 240 LEYSEEETYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAAL 299
Query: 127 RNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL 173
NGR+YAGR + +F PVT ++ A C +E C RG +CNF+H+
Sbjct: 300 SLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 346
>gi|395837998|ref|XP_003791914.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Otolemur garnettii]
Length = 493
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/167 (42%), Positives = 93/167 (55%), Gaps = 4/167 (2%)
Query: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMIT---PGVDPQGQ 67
EKDR NCPFY K GACR GDRCSR H P+ SPTLL+ +M+ M DP
Sbjct: 164 MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDAS 223
Query: 68 A-LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANAL 126
+ F DFY+D+ E G++ + NL H+ GNVYVQ++ EE A
Sbjct: 224 LEYSEEETYQQFLDFYDDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQTEEECQTAF 283
Query: 127 RNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL 173
NGR+YAGR + +F PVT ++ A C +E C RG +CNF+H+
Sbjct: 284 SLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 330
>gi|389592512|ref|XP_003721697.1| putative U2 splicing auxiliary factor [Leishmania major strain
Friedlin]
gi|321438230|emb|CBZ11982.1| putative U2 splicing auxiliary factor [Leishmania major strain
Friedlin]
Length = 210
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 104/168 (61%), Gaps = 1/168 (0%)
Query: 18 CPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQ-ALDPRKIQD 76
C F+ K+GACRHGD+C++LH +P SPT+L MY P I D + LD + ++
Sbjct: 8 CVFFSKMGACRHGDQCTKLHYRPDTSPTVLFPLMYPNPHAIEHIKDREWNFELDKKYLKK 67
Query: 77 HFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAG 136
HFE FY++++ ++G I L + NL DH++GNVY++F + + A ++ L G+
Sbjct: 68 HFEHFYKEVWRTFMEFGRIAELRVVSNLGDHLLGNVYIRFEDPQVATRIVKELRGKKLND 127
Query: 137 RPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRL 184
++ + SPVT+F EA C++ EN C RG CN++H+ K+SR L +L
Sbjct: 128 IIVLPELSPVTNFAEACCKEDLENRCQRGEQCNYLHIMKVSRRLLEKL 175
>gi|363756078|ref|XP_003648255.1| hypothetical protein Ecym_8150 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891455|gb|AET41438.1| Hypothetical protein Ecym_8150 [Eremothecium cymbalariae
DBVPG#7215]
Length = 258
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/176 (42%), Positives = 106/176 (60%), Gaps = 10/176 (5%)
Query: 20 FYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKIQDHFE 79
FY+KIGACRHGD+CS+ H++P S T+++ NMY P+ I + QA D F+
Sbjct: 63 FYYKIGACRHGDKCSKRHSRPINSQTIVIYNMYIPPNDIN---QVKLQAED-------FD 112
Query: 80 DFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPI 139
FYED+F E +K+GE++ + +C+N DH+ GNVY++F + A A R+Y RP+
Sbjct: 113 FFYEDVFLEAAKFGEVQEIIVCENKTDHLNGNVYIRFSTSDAAKAARDAFVTRWYGERPL 172
Query: 140 IVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRRRRSRS 195
D S VTDFREA C+ YEE C RG CNF+H +++ L L ++R S
Sbjct: 173 YCDLSHVTDFREAVCKSYEEGKCGRGEQCNFIHRRRVDYSLANGLLLSQWKKRHIS 228
>gi|332221469|ref|XP_003259883.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1 isoform 5 [Nomascus
leucogenys]
Length = 507
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/167 (43%), Positives = 93/167 (55%), Gaps = 4/167 (2%)
Query: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMIT---PGVDPQGQ 67
EKDR NCPFY K GACR G RCSR H P+ SPTLL+ +M+ M DP
Sbjct: 195 MEKDRANCPFYSKTGACRFGHRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDAS 254
Query: 68 A-LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANAL 126
+ F DFYED+ E G++ + NL H+ GNVYVQ++ EE AL
Sbjct: 255 LEYSEEETYQQFLDFYEDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAAL 314
Query: 127 RNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL 173
NGR+YAGR + +F PVT ++ A C +E C RG +CNF+H+
Sbjct: 315 SLFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 361
>gi|367009756|ref|XP_003679379.1| hypothetical protein TDEL_0B00390 [Torulaspora delbrueckii]
gi|359747037|emb|CCE90168.1| hypothetical protein TDEL_0B00390 [Torulaspora delbrueckii]
Length = 190
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 74/176 (42%), Positives = 107/176 (60%), Gaps = 15/176 (8%)
Query: 20 FYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKIQDHFE 79
FY KIGACRHGD+CS+ H +P S T++L NM P G+D Q FE
Sbjct: 27 FYCKIGACRHGDKCSKKHIRPVRSNTIVLYNMLHIP---ASGLD-----------QSSFE 72
Query: 80 DFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPI 139
DFYED++ E ++G + S+ +C+N DH+ GNVY+ F A A+ + N R+Y RPI
Sbjct: 73 DFYEDVYIEACRFGAVRSMVVCENGNDHLKGNVYLHFEHPNEAQRAMDDFNTRWYDERPI 132
Query: 140 IVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRRRRSRS 195
D + + DFR+A CR++++ C RG CNFMH+++ S+ L+ L RS+ +SRS
Sbjct: 133 YCDLTHIVDFRDAICRRHDQQACERGDECNFMHIRRPSQGLKIDL-ERSQTSKSRS 187
>gi|444707445|gb|ELW48720.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 1 [Tupaia chinensis]
Length = 612
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 72/166 (43%), Positives = 94/166 (56%), Gaps = 4/166 (2%)
Query: 12 EKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMIT---PGVDPQGQA 68
EKDR NCPFY K GACR GDRCSR H P+ SPTLL+ +M+ M DP
Sbjct: 295 EKDRANCPFYSKTGACRFGDRCSRKHNFPASSPTLLIRSMFTTFGMEQCRRDDYDPDASL 354
Query: 69 -LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALR 127
+ F DFY+D+ E G++ + NL H+ GNVYVQ++ EE AL
Sbjct: 355 EYSEEETYQQFLDFYDDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALS 414
Query: 128 NLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL 173
NGR+YAGR + +F PVT ++ A C +E C RG +CNF+H+
Sbjct: 415 LFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 460
>gi|297849356|ref|XP_002892559.1| hypothetical protein ARALYDRAFT_471143 [Arabidopsis lyrata subsp.
lyrata]
gi|297338401|gb|EFH68818.1| hypothetical protein ARALYDRAFT_471143 [Arabidopsis lyrata subsp.
lyrata]
Length = 772
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 104/167 (62%), Gaps = 5/167 (2%)
Query: 9 FGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQA 68
FGTE+D+ +CPF+ K GACR G RCSR+H P+ S TLL+ NMY P + +G
Sbjct: 237 FGTEQDKAHCPFHLKTGACRFGPRCSRVHFYPNKSCTLLMKNMYNGPGIAWE--QDEGLE 294
Query: 69 LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRN 128
+ + +E+FYED+ E KYGE+ + +C N + H+ GNVYV +R E A A ++
Sbjct: 295 YTDEEAEHCYEEFYEDVHTEFLKYGELINFKVCRNGSFHLKGNVYVHYRSLESAILAYQS 354
Query: 129 LNGRFYAGRPIIVDFSPVTDFREATCRQYEEN---VCNRGGYCNFMH 172
+NGR++AG+ + +F ++ ++ A C +Y ++ C+RG CNF+H
Sbjct: 355 INGRYFAGKQVNCEFVNISRWKVAICGEYMKSRLKTCSRGSACNFIH 401
>gi|121949800|ref|NP_033479.2| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2 isoform 1 [Mus musculus]
gi|162319138|gb|AAI56405.1| Zinc finger (CCCH type), RNA binding motif and serine/arginine rich
2 [synthetic construct]
gi|225000398|gb|AAI72696.1| Zinc finger (CCCH type), RNA binding motif and serine/arginine rich
2 [synthetic construct]
Length = 541
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 72/166 (43%), Positives = 92/166 (55%), Gaps = 4/166 (2%)
Query: 12 EKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMIT---PGVDPQGQA 68
EKDR NCPFY K GACR GDRCSR H P+ SPTLL+ M+ M DP
Sbjct: 170 EKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKGMFTTFGMEQCRRDDYDPDSSL 229
Query: 69 -LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALR 127
+I F DFY D+ E G++ + NL H+ GNVYVQ++ EE A
Sbjct: 230 EFSEEEIYQQFLDFYYDVLPEFKSVGKVIQFKVSCNLEPHLRGNVYVQYQSEEDCQAAFS 289
Query: 128 NLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL 173
NGR+YAGR + +F PVT ++ A C +E C RG +CNF+H+
Sbjct: 290 VFNGRWYAGRQLQCEFCPVTRWKMAICGLFEVQQCPRGKHCNFLHV 335
>gi|148708819|gb|EDL40766.1| U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1,
related sequence 2 [Mus musculus]
Length = 498
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 72/166 (43%), Positives = 92/166 (55%), Gaps = 4/166 (2%)
Query: 12 EKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMIT---PGVDPQGQA 68
EKDR NCPFY K GACR GDRCSR H P+ SPTLL+ M+ M DP
Sbjct: 127 EKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKGMFTTFGMEQCRRDDYDPDSSL 186
Query: 69 -LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALR 127
+I F DFY D+ E G++ + NL H+ GNVYVQ++ EE A
Sbjct: 187 EFSEEEIYQQFLDFYYDVLPEFKSVGKVIQFKVSCNLEPHLRGNVYVQYQSEEDCQAAFS 246
Query: 128 NLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL 173
NGR+YAGR + +F PVT ++ A C +E C RG +CNF+H+
Sbjct: 247 VFNGRWYAGRQLQCEFCPVTRWKMAICGLFEVQQCPRGKHCNFLHV 292
>gi|449432946|ref|XP_004134259.1| PREDICTED: uncharacterized protein LOC101216050 [Cucumis sativus]
Length = 867
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 100/167 (59%), Gaps = 5/167 (2%)
Query: 9 FGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQA 68
FGTE+D+ +CPF+ K GACR G RCSR+H P S TLL+ NMY P + +G
Sbjct: 212 FGTEQDKSHCPFHLKTGACRFGQRCSRIHFYPEKSCTLLIKNMYNGPGLAWE--QDEGLE 269
Query: 69 LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRN 128
+++ +E+FY+D+ E KYGEI + +C N + H+ GN+YV ++ + A A
Sbjct: 270 FTDEEVERCYEEFYDDVHTEFLKYGEIVNFKVCKNGSFHLRGNLYVHYKSVDSAVLAYNA 329
Query: 129 LNGRFYAGRPIIVDFSPVTDFREATCRQYEEN---VCNRGGYCNFMH 172
NGRFYAG+ II +F VT ++ A C ++ + C+ G CNF+H
Sbjct: 330 NNGRFYAGKQIICEFINVTRWKIAICGEFMKTRYKTCSHGTACNFIH 376
>gi|350595997|ref|XP_003360579.2| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Sus scrofa]
Length = 407
Score = 144 bits (362), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 69/167 (41%), Positives = 94/167 (56%), Gaps = 4/167 (2%)
Query: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMIT---PGVDPQGQ 67
EKDR +CPFY K GACR GD+CSR H+ P+ SPTLL+ +M+ M DP
Sbjct: 136 MEKDRAHCPFYIKTGACRFGDKCSRKHSFPASSPTLLIKSMFTTFGMEQCRRDDYDPDAS 195
Query: 68 A-LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANAL 126
+ F DFY+D+ E G++ + NL H+ GNVYVQ++ EE AL
Sbjct: 196 LEYSEEETYQQFLDFYDDVLPEFKNVGKVVQFKVSCNLEPHLRGNVYVQYQSEEECQAAL 255
Query: 127 RNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL 173
NGR+YAGR + + PVT ++ A C +E C RG +CNF+H+
Sbjct: 256 SLFNGRWYAGRQLQCEICPVTQWKMAICGLFEIQQCPRGKHCNFLHV 302
>gi|154331585|ref|XP_001561610.1| putative U2 splicing auxiliary factor [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134058929|emb|CAM36756.1| putative U2 splicing auxiliary factor [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 210
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 67/177 (37%), Positives = 107/177 (60%), Gaps = 3/177 (1%)
Query: 9 FGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQ- 67
T DR C F+ ++GACRHGD+C++LH +P SPT+L MY P I D +
Sbjct: 1 MTTHVDR--CVFFSRMGACRHGDQCTKLHYRPDTSPTVLFPMMYPNPHAIVHIKDREWNF 58
Query: 68 ALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALR 127
LD + ++ HFE FY++++ ++G I L + NL DH++GNVY++F + + A+ +
Sbjct: 59 ELDKKYLKKHFEHFYKEVWRTFMEFGRIAELRVVSNLGDHLLGNVYIRFEDPQVASRIVN 118
Query: 128 NLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRL 184
L G+ ++ + SPVT+F EA C++ E+ C RG CN++H+ K+SR L +L
Sbjct: 119 ELRGKKLNAVIVLPELSPVTNFAEACCKEDLESRCQRGEQCNYLHIMKVSRRLLEKL 175
>gi|146075783|ref|XP_001462772.1| putative U2 splicing auxiliary factor [Leishmania infantum JPCM5]
gi|398009570|ref|XP_003857984.1| U2 splicing auxiliary factor, putative [Leishmania donovani]
gi|134066852|emb|CAM59993.1| putative U2 splicing auxiliary factor [Leishmania infantum JPCM5]
gi|322496188|emb|CBZ31259.1| U2 splicing auxiliary factor, putative [Leishmania donovani]
Length = 210
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 104/168 (61%), Gaps = 1/168 (0%)
Query: 18 CPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQ-ALDPRKIQD 76
C F+ K+GACRHGD+C++LH +P SPT+L MY P + D + LD + ++
Sbjct: 8 CVFFSKMGACRHGDQCTKLHYRPDTSPTVLFPLMYPNPHAVEHIKDREWNFELDRKYLKK 67
Query: 77 HFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAG 136
HFE FY++++ ++G I L + NL DH++GNVY++F + + A ++ L G+
Sbjct: 68 HFEHFYKEVWRTFMEFGRIAELRVVSNLGDHLLGNVYIRFEDPQVATRIVKELRGKKLND 127
Query: 137 RPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRL 184
++ + SPVT+F EA C++ EN C RG CN++H+ K+SR L +L
Sbjct: 128 IIVLPELSPVTNFAEACCKEDLENRCQRGEQCNYLHIMKVSRRLLEKL 175
>gi|410978386|ref|XP_003995574.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Felis catus]
Length = 468
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 71/166 (42%), Positives = 92/166 (55%), Gaps = 4/166 (2%)
Query: 12 EKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMIT---PGVDPQGQA 68
EKDR NCPFY K GACR GDRC R H PS SPTLL+ +M+ M DP
Sbjct: 166 EKDRANCPFYGKTGACRFGDRCLRKHNFPSSSPTLLIKSMFTTFGMEQCRRDDYDPDASL 225
Query: 69 -LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALR 127
+ F DFY+D+ E G++ + N H+ GNVYVQ++ EE AL
Sbjct: 226 EYSEEETYQQFLDFYDDVLPEFRSVGKVIQFKVSCNFEPHLRGNVYVQYQSEEECQAALS 285
Query: 128 NLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL 173
NGR+YAGR + +F PVT ++ A C +E C RG +CNF+H+
Sbjct: 286 LFNGRWYAGRQLRCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 331
>gi|293350806|ref|XP_001067753.2| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Rattus norvegicus]
gi|293362880|ref|XP_217612.5| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Rattus norvegicus]
Length = 541
Score = 143 bits (361), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 71/166 (42%), Positives = 92/166 (55%), Gaps = 4/166 (2%)
Query: 12 EKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMIT---PGVDPQGQA 68
EKDR NCPFY K GACR GDRCSR H P+ SPTLL+ +M+ M DP
Sbjct: 166 EKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDSSL 225
Query: 69 -LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALR 127
+ F DFY D+ E G++ + NL H+ GNVYVQ++ EE A
Sbjct: 226 EYSEEETYQQFLDFYYDVLPEFKSVGKVIQFKVSCNLEPHLRGNVYVQYQSEEDCQAAFS 285
Query: 128 NLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL 173
NGR+YAGR + +F PVT ++ A C +E C RG +CNF+H+
Sbjct: 286 VFNGRWYAGRQLQCEFCPVTRWKMAICGLFEVQQCPRGKHCNFLHV 331
>gi|449478305|ref|XP_004155279.1| PREDICTED: zinc finger CCCH domain-containing protein 5-like
[Cucumis sativus]
Length = 838
Score = 143 bits (361), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 100/167 (59%), Gaps = 5/167 (2%)
Query: 9 FGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQA 68
FGTE+D+ +CPF+ K GACR G RCSR+H P S TLL+ NMY P + +G
Sbjct: 212 FGTEQDKSHCPFHLKTGACRFGQRCSRIHFYPEKSCTLLIKNMYNGPGLAWE--QDEGLE 269
Query: 69 LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRN 128
+++ +E+FY+D+ E KYGEI + +C N + H+ GN+YV ++ + A A
Sbjct: 270 FTDEEVERCYEEFYDDVHTEFLKYGEIVNFKVCKNGSFHLRGNLYVHYKSVDSAVLAYNA 329
Query: 129 LNGRFYAGRPIIVDFSPVTDFREATCRQYEEN---VCNRGGYCNFMH 172
NGRFYAG+ II +F VT ++ A C ++ + C+ G CNF+H
Sbjct: 330 NNGRFYAGKQIICEFINVTRWKIAICGEFMKTRYKTCSHGTACNFIH 376
>gi|431909774|gb|ELK12920.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2 [Pteropus alecto]
Length = 461
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/166 (42%), Positives = 93/166 (56%), Gaps = 4/166 (2%)
Query: 12 EKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMIT---PGVDPQGQA 68
EKDR NCPFY K GACR GDRCSR H P+ SPTLL+ +M+ M DP
Sbjct: 161 EKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIRSMFTTFGMEQCRRDDYDPDASL 220
Query: 69 -LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALR 127
+ F DFYED+ E G++ + N+ H+ GNVYVQ++ EE A
Sbjct: 221 EYSEEETYQQFLDFYEDVLPEFRNVGKVVQFKVSCNMEPHLRGNVYVQYQSEEECQAARS 280
Query: 128 NLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL 173
NGR+YAGR + +F PVT ++ A C +E C RG +CNF+H+
Sbjct: 281 LFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 326
>gi|407410372|gb|EKF32829.1| U2 splicing auxiliary factor, putative [Trypanosoma cruzi
marinkellei]
gi|407410375|gb|EKF32830.1| U2 splicing auxiliary factor, putative [Trypanosoma cruzi
marinkellei]
Length = 233
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/227 (35%), Positives = 120/227 (52%), Gaps = 24/227 (10%)
Query: 18 CPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQA-LDPRKIQD 76
C F+ K+GACRHGD C+++H +P+ SPT+L MY P I D Q + D + ++
Sbjct: 6 CIFFSKMGACRHGDHCTKVHVRPTSSPTVLFPMMYPNPMAIEHIQDRQWEFHFDRKYLKR 65
Query: 77 HFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAG 136
HFE FY++ + + G I L + NL DH++GNVY++F E A++ R L +
Sbjct: 66 HFEHFYKETWRTFMELGRIAELRVVSNLGDHLLGNVYIRFEEAAEASHIARELKAKKLNE 125
Query: 137 RPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRRRRSRSR 196
++ + SPVT+F +A C++ E C RG CN++H+ K+SR+L +L
Sbjct: 126 IILLPELSPVTNFADACCKEDLEGKCGRGAQCNYLHIIKVSRKLMEKL------------ 173
Query: 197 SRSRSPHKYRGGYEERSHGGGRGSGRRDDDRDHRLHGRGRRPRSRSP 243
+ KY E+ S GG R R D RG R RSRSP
Sbjct: 174 --EKEQAKYWKKKEKHSRGGDRKRERSKD--------RG-RDRSRSP 209
>gi|344288487|ref|XP_003415981.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Loxodonta africana]
Length = 489
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/167 (41%), Positives = 95/167 (56%), Gaps = 4/167 (2%)
Query: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVD---PQGQ 67
TEKDR CPFY K GACR GDRCSR H+ P+ SPTLL+ +M+ M +D P
Sbjct: 151 TEKDRAYCPFYSKTGACRFGDRCSRKHSFPASSPTLLIKSMFTTFGMEQSRMDDYDPDAS 210
Query: 68 A-LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANAL 126
+ F +FY+D+ E G++ + N H+ GNVYVQ++ EE A
Sbjct: 211 LEYSEEETYQQFLEFYDDVLPEFKNVGKVIQFKVSCNSEPHLRGNVYVQYQSEEECQAAH 270
Query: 127 RNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL 173
NGR+YAGR + +F PVT ++ A CR +E C RG +CNF+H+
Sbjct: 271 SLFNGRWYAGRQLQCEFCPVTRWQMAICRVFETQQCPRGKHCNFLHV 317
>gi|71399405|ref|XP_802775.1| U2 splicing auxiliary factor [Trypanosoma cruzi strain CL Brener]
gi|71657119|ref|XP_817079.1| U2 splicing auxiliary factor [Trypanosoma cruzi strain CL Brener]
gi|70864869|gb|EAN81329.1| U2 splicing auxiliary factor, putative [Trypanosoma cruzi]
gi|70882249|gb|EAN95228.1| U2 splicing auxiliary factor, putative [Trypanosoma cruzi]
Length = 233
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 113/203 (55%), Gaps = 7/203 (3%)
Query: 18 CPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQA-LDPRKIQD 76
C F+ K+GACRHGD C+++H +P+ SPT+L MY P I D Q D + ++
Sbjct: 6 CIFFSKMGACRHGDHCTKVHVRPTSSPTVLFPMMYPNPMAIEHIQDRQWDFHFDRKYLKR 65
Query: 77 HFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAG 136
HFE FY++ + + G I L + NL DH++GNVY++F E A++ R L +
Sbjct: 66 HFEHFYKETWRTFMELGRIAELRVVSNLGDHLLGNVYIRFEEAADASHIARELKAKKLNE 125
Query: 137 RPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRL------FGRSRR 190
++ + SPVT+F +A C++ E C RG CN++H+ K+SR+L +L + + +
Sbjct: 126 IILLPELSPVTNFADACCKEDLEGKCGRGAQCNYLHIIKVSRKLMEKLEKEQAKYWKKKE 185
Query: 191 RRSRSRSRSRSPHKYRGGYEERS 213
+ SR R R K RG RS
Sbjct: 186 KHSRGSDRKRERSKDRGRERSRS 208
>gi|407849824|gb|EKG04420.1| U2 splicing auxiliary factor, putative [Trypanosoma cruzi]
Length = 233
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 113/203 (55%), Gaps = 7/203 (3%)
Query: 18 CPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQA-LDPRKIQD 76
C F+ K+GACRHGD C+++H +P+ SPT+L MY P I D Q D + ++
Sbjct: 6 CIFFSKMGACRHGDHCTKVHVRPTSSPTVLFPMMYPNPMAIEHIQDRQWDFHFDRKYLKR 65
Query: 77 HFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAG 136
HFE FY++ + + G I L + NL DH++GNVY++F E A++ R L +
Sbjct: 66 HFEHFYKETWRTFMELGRIAELRVVSNLGDHLLGNVYIRFEEAADASHIARELKAKKLNE 125
Query: 137 RPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRL------FGRSRR 190
++ + SPVT+F +A C++ E C RG CN++H+ K+SR+L +L + + +
Sbjct: 126 IILLPELSPVTNFADACCKEDLEGKCGRGAQCNYLHIIKVSRKLMEKLEKEQAKYWKKKE 185
Query: 191 RRSRSRSRSRSPHKYRGGYEERS 213
+ SR R R K RG RS
Sbjct: 186 KHSRVSDRKRERSKDRGRERSRS 208
>gi|225465261|ref|XP_002268270.1| PREDICTED: uncharacterized protein LOC100247160 [Vitis vinifera]
Length = 887
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/167 (39%), Positives = 101/167 (60%), Gaps = 5/167 (2%)
Query: 9 FGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQA 68
FGTE+D+ +CPF+ K GACR G RCSR+H P S TLL+ NMY P + +G
Sbjct: 197 FGTEQDKDHCPFHIKTGACRFGQRCSRVHFYPDKSCTLLIKNMYNGPGLAWE--QDEGLE 254
Query: 69 LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRN 128
+++ +E+FYED+ E K+GEI + +C N + H+ GNVYV ++ + A A +
Sbjct: 255 YTDEEVERCYEEFYEDVQTEFLKFGEIVNFKVCRNGSFHLRGNVYVHYKSLDSAVLAYHS 314
Query: 129 LNGRFYAGRPIIVDFSPVTDFREATCRQYEEN---VCNRGGYCNFMH 172
+NG +YAG+ + +F VT ++ A C +Y ++ C+ G CNF+H
Sbjct: 315 INGLYYAGKQVTCEFVGVTRWKVAICGEYMKSRFKTCSHGTACNFIH 361
>gi|449483114|ref|XP_002194245.2| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Taeniopygia guttata]
Length = 644
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 98/177 (55%), Gaps = 16/177 (9%)
Query: 9 FGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGV------ 62
GTEKDR NCPFY K G+CR GDRCSR H P+ S TLL+ M+ IT G+
Sbjct: 335 LGTEKDRANCPFYIKTGSCRFGDRCSRKHNYPTSSKTLLVRGMF-----ITFGMEQCRRD 389
Query: 63 ----DPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFRE 118
D + D Q F +FYED+ E G++ + N H+ GNVYVQ++
Sbjct: 390 DYDTDASLEYSDEETYQ-QFLEFYEDVLPEFQNVGKVVQFKVSCNYEPHLRGNVYVQYQS 448
Query: 119 EEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKK 175
E+ AL +GR+YAGR + +F PVT ++ A C +E C RG +CNF+H+ K
Sbjct: 449 EKDCQAALALFSGRWYAGRQLHCEFCPVTRWKTAICGLFERQKCPRGKHCNFLHVFK 505
>gi|326477662|gb|EGE01672.1| splicing factor U2AF 35 kDa subunit [Trichophyton equinum CBS
127.97]
Length = 169
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 71/147 (48%), Positives = 94/147 (63%), Gaps = 6/147 (4%)
Query: 69 LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRN 128
++P ++Q+HF+ FYED + E+ KYGEIE + +C+N DH++GNVY +F+ E+ A A
Sbjct: 23 MNPSQLQNHFDAFYEDFWCEMCKYGEIEEVVVCENNNDHLIGNVYARFKYEDSAQKACDA 82
Query: 129 LNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRL---- 184
LN R+YA RPI + SPVTDFREA CR C RGG+CNF+H K+ S EL R L
Sbjct: 83 LNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSEELDRELELST 142
Query: 185 --FGRSRRRRSRSRSRSRSPHKYRGGY 209
+ R R R RS +RS SP R Y
Sbjct: 143 KKWLRLRGRDERSVTRSPSPEPTRKRY 169
>gi|326913598|ref|XP_003203123.1| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Meleagris gallopavo]
Length = 473
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 98/177 (55%), Gaps = 16/177 (9%)
Query: 9 FGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGV------ 62
GTEKDR NCPFY K G+CR GDRCSR H P+ S TLL+ M+ IT G+
Sbjct: 164 IGTEKDRANCPFYIKTGSCRFGDRCSRKHNYPTSSKTLLVRGMF-----ITFGMEQCRRD 218
Query: 63 ----DPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFRE 118
D + D Q F +FYED+ E G++ + N H+ GNVYVQ++
Sbjct: 219 DYDTDASLEYSDEETYQ-QFLEFYEDVLPEFQNVGKVVQFKVSCNYEPHLRGNVYVQYQT 277
Query: 119 EEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKK 175
E+ AL +GR+YAGR + +F PVT ++ A C +E C RG +CNF+H+ K
Sbjct: 278 EKDCQAALALFSGRWYAGRQLHCEFCPVTRWKTAICGLFERQKCPRGKHCNFLHVFK 334
>gi|449270924|gb|EMC81567.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2, partial [Columba livia]
Length = 453
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 98/177 (55%), Gaps = 16/177 (9%)
Query: 9 FGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGV------ 62
GTEKDR NCPFY K G+CR GDRCSR H P+ S TLL+ M+ IT G+
Sbjct: 150 IGTEKDRANCPFYIKTGSCRFGDRCSRKHNYPTSSKTLLVRGMF-----ITFGMEQCRRD 204
Query: 63 ----DPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFRE 118
D + D Q F +FYED+ E G++ + N H+ GNVYVQ++
Sbjct: 205 DYDTDASLEYSDEETYQ-QFLEFYEDVLPEFQNVGKVVQFKVSCNYEPHLRGNVYVQYQS 263
Query: 119 EEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKK 175
E+ AL +GR+YAGR + +F PVT ++ A C +E C RG +CNF+H+ K
Sbjct: 264 EKDCQAALALFSGRWYAGRQLHCEFCPVTRWKTAICGLFERQKCPRGKHCNFLHVFK 320
>gi|342184023|emb|CCC93504.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 234
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 79/232 (34%), Positives = 122/232 (52%), Gaps = 23/232 (9%)
Query: 18 CPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQA-LDPRKIQD 76
C F+ K+GACRHGD C+++H +P+ SPT+L MY P I D + D R ++
Sbjct: 6 CIFFSKMGACRHGDNCTKIHVRPTSSPTVLFPLMYPNPAAIEHIQDREWDFHFDRRYLRQ 65
Query: 77 HFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAG 136
HFE FY++ + + G I L + NL DH++GNVY++F + A +R L +
Sbjct: 66 HFERFYKETWRTFMELGHIAELRVVSNLGDHLLGNVYIRFEDSHEALRVVRELKAKKLNN 125
Query: 137 RPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRRRRSRSR 196
++ + SPVT+F +A C++ E C RG CN++H+ K+SR+L +L
Sbjct: 126 IVLLPELSPVTNFADACCKEDLEGNCERGSQCNYLHIMKVSRKLMEKL------------ 173
Query: 197 SRSRSPHKYRGGYEERSHGGGRGSGRRDDDRDHRLHGRGRRPRSRSPGRRGG 248
+ KYR ++ H G S +R+ +D RG R R +SP GG
Sbjct: 174 --EKEQAKYRKKKDK--HSGSTSSRKRERSKD-----RG-RDRQKSPRAHGG 215
>gi|189525066|ref|XP_001920562.1| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Danio rerio]
Length = 635
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 93/173 (53%), Gaps = 12/173 (6%)
Query: 9 FGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMY--------QRPDMITP 60
+GTEKD+ NCPF+ K GACR GDRCSR H P+ S TL++ M+ +R D T
Sbjct: 176 YGTEKDKANCPFFLKTGACRFGDRCSRKHDHPASSCTLMVRGMFVSFGMEQSRRDDYDTD 235
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
++ F DFYED E G + + N H+ GNVYVQ+ EE
Sbjct: 236 A----SLEYSEEELHQQFLDFYEDALPEFKNAGRVVQFKVSCNFEPHLRGNVYVQYETEE 291
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL 173
A NGR+YAGR + +FSPVT ++ A C ++ C +G +CNF+H+
Sbjct: 292 QCKEAFVMFNGRWYAGRQLQCEFSPVTRWKTAICGLFDRRKCPKGKHCNFLHV 344
>gi|344288699|ref|XP_003416084.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Loxodonta africana]
Length = 532
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 69/167 (41%), Positives = 94/167 (56%), Gaps = 4/167 (2%)
Query: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVD---PQGQ 67
EKDR CPFY K GACR GDRCSR H+ P+ SPTLL+ +M+ M +D P
Sbjct: 214 MEKDRAYCPFYSKTGACRFGDRCSRKHSFPTSSPTLLIKSMFTTFGMEQCRMDDYDPDAS 273
Query: 68 A-LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANAL 126
+ F +FY+D+ E G++ + N H+ GNVYVQ++ EE AL
Sbjct: 274 LEYSEEETYQQFLEFYDDVLPEFRNVGKVIQFKVSCNFEPHLRGNVYVQYQSEEECQAAL 333
Query: 127 RNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL 173
NGR+YAGR + +F PVT ++ A C +E C RG +CNF+H+
Sbjct: 334 SVFNGRWYAGRQLQCEFCPVTRWQMAICGLFETQQCPRGKHCNFLHV 380
>gi|449682646|ref|XP_002156010.2| PREDICTED: splicing factor U2AF 26 kDa subunit-like [Hydra
magnipapillata]
Length = 190
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 85/175 (48%), Positives = 109/175 (62%), Gaps = 27/175 (15%)
Query: 51 MYQRPDMITP----GVDPQGQALDPRKIQDHFEDFYEDLFEEL-----SKYGEIESLNIC 101
M+Q P + G ++ + Q+H Y++ FE++ +KYGEIE +N+C
Sbjct: 1 MFQNPQNLAVTNEFGQSNAASIMNDVEAQEH----YDNFFEDVFLELEAKYGEIEEMNVC 56
Query: 102 DNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENV 161
DNL DH+VGNVYV+FR EE A A+ N+N R+Y G+PI + SPVTDFRE+ CRQYE
Sbjct: 57 DNLGDHLVGNVYVKFRFEEDAEKAVDNVNNRWYNGQPIYAELSPVTDFRESCCRQYEMGE 116
Query: 162 CNRGGYCNFMHLKKISRELRRRLFGRSRR--------------RRSRSRSRSRSP 202
C RGG+CNFMHLK ISRELRRRL+GR R +R RSRS S SP
Sbjct: 117 CTRGGFCNFMHLKPISRELRRRLYGRRRGGAGVGGGAASGPMVKRGRSRSISPSP 171
>gi|440802051|gb|ELR22990.1| zinc finger domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 294
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 100/189 (52%), Gaps = 48/189 (25%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRP---DM 57
MA HLA IFGTEKD S TLL+ +MY P +
Sbjct: 1 MARHLAEIFGTEKD----------------------------SQTLLIPHMYMPPVPAEW 32
Query: 58 ITPGVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFR 117
T D Q R ++HF DF+ED+ +EL +G +E L++CDN +
Sbjct: 33 PTSPDDVQAMQKIQRDAEEHFNDFFEDIHDELRNFGRLEDLHVCDNTGE----------- 81
Query: 118 EEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIS 177
A++ L GRFY GR ++ +FSPVTDFREA CRQY+ N CNRGG CNFMHLK++
Sbjct: 82 ------KAMKALTGRFYGGRLLVPEFSPVTDFREARCRQYDSNECNRGGQCNFMHLKQVD 135
Query: 178 RELRRRLFG 186
EL RRLFG
Sbjct: 136 PELERRLFG 144
>gi|363728701|ref|XP_425572.3| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Gallus gallus]
Length = 473
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 98/177 (55%), Gaps = 16/177 (9%)
Query: 9 FGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGV------ 62
GTEKDR NCPFY K G+CR GDRCSR H P+ S TLL+ M+ IT G+
Sbjct: 164 IGTEKDRANCPFYIKTGSCRFGDRCSRKHNYPTSSKTLLVRGMF-----ITFGMEQCRRD 218
Query: 63 ----DPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFRE 118
D + D Q F +FYED+ E G++ + N H+ GNVYVQ++
Sbjct: 219 DYDTDASLEYSDEETYQ-QFLEFYEDVLPEFQNVGKVVQFKVSCNYEPHLRGNVYVQYQT 277
Query: 119 EEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKK 175
E+ AL +GR+YAGR + +F PVT ++ A C +E C RG +CNF+H+ K
Sbjct: 278 EKDCQAALALFSGRWYAGRQLHCEFCPVTRWKTAICGLFERQKCPRGKHCNFLHVFK 334
>gi|351696721|gb|EHA99639.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2 [Heterocephalus glaber]
Length = 511
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 71/166 (42%), Positives = 92/166 (55%), Gaps = 4/166 (2%)
Query: 12 EKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMIT---PGVDPQGQA 68
EKDR NCPFY K GACR GDRCSR H P+ S TLL+ +M+ M DP
Sbjct: 186 EKDRANCPFYSKTGACRFGDRCSRKHNFPTSSSTLLIRSMFTTFGMEQCRRDDYDPDASL 245
Query: 69 -LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALR 127
+ F DFY D+ E G++ + NL H+ GNVYVQ++ EE AL
Sbjct: 246 EYSDEETYQQFLDFYHDVVPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECHAALS 305
Query: 128 NLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL 173
NGR+YAGR + +F PVT ++ A C +E C RG +CNF+H+
Sbjct: 306 LFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 351
>gi|226469292|emb|CAX70125.1| Splicing factor U2AF 35 kDa subunit [Schistosoma japonicum]
Length = 198
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 62/95 (65%), Positives = 77/95 (81%)
Query: 91 KYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVDFSPVTDFR 150
KYGEIE +N+CDNL DH+VGNVY++FR EE A A+++LN R++ GRP+ + SPVTDFR
Sbjct: 69 KYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVQDLNERWFGGRPVHAELSPVTDFR 128
Query: 151 EATCRQYEENVCNRGGYCNFMHLKKISRELRRRLF 185
EA CRQYE C RGG+CNFMHLK ISREL R+L+
Sbjct: 129 EACCRQYELGECTRGGFCNFMHLKPISRELCRKLY 163
>gi|297745616|emb|CBI40781.3| unnamed protein product [Vitis vinifera]
Length = 179
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 69/114 (60%), Positives = 76/114 (66%), Gaps = 34/114 (29%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P+ISPTLLLSNMYQ
Sbjct: 11 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQ------- 63
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYV 114
+L K+GEIESLN+CDNLADHM+G V +
Sbjct: 64 ---------------------------QLGKFGEIESLNVCDNLADHMIGAVLL 90
>gi|367000677|ref|XP_003685074.1| hypothetical protein TPHA_0C04920 [Tetrapisispora phaffii CBS 4417]
gi|357523371|emb|CCE62640.1| hypothetical protein TPHA_0C04920 [Tetrapisispora phaffii CBS 4417]
Length = 229
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 81/203 (39%), Positives = 115/203 (56%), Gaps = 25/203 (12%)
Query: 12 EKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRP-----------DMITP 60
EK+R C FY+K+G CRHG++CS+ HT P+ S T++L N+ P T
Sbjct: 16 EKER--CLFYYKVGVCRHGNKCSKSHTSPNRSHTIVLLNLVDFPRNADVTTSNTATTTTD 73
Query: 61 GVDPQGQALDPRK----------IQD-HFEDFYEDLFEELSKYGEIESLNICDNLADHMV 109
D Q P K I D ++ YEDL+ EL+KYG I + ICDN DH+
Sbjct: 74 ESDKSTQETKPNKPTTKNKSTPPIDDKEYDSIYEDLYIELAKYGRIMEMYICDNGNDHLR 133
Query: 110 GNVYVQFREEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENV-CNRGGYC 168
GNVYV++ E++A +A LN R++ G+PI D + + DF EA CR+ EE C RG +C
Sbjct: 134 GNVYVRYSSEQNARDANNELNTRWFNGKPIYCDLTHIHDFGEAICRKPEEKSGCERGDHC 193
Query: 169 NFMHLKKISRELRRRLFGRSRRR 191
NFMH++K S +L+ L R++
Sbjct: 194 NFMHIRKPSPQLQTDLENAQRKK 216
>gi|218190979|gb|EEC73406.1| hypothetical protein OsI_07661 [Oryza sativa Indica Group]
Length = 731
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 102/175 (58%), Gaps = 13/175 (7%)
Query: 9 FGTEK--------DRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
FGTE+ D+ +CPF+ K GACR G RCSR+H P S TLL+ NMY P +
Sbjct: 205 FGTEQASSMILFQDKAHCPFHLKTGACRFGVRCSRVHFYPDKSCTLLMRNMYSGPGLALE 264
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
+G +I+ +E+FYED+ E K+GE+ + +C N + H+ GNVYV ++ +
Sbjct: 265 --QDEGLECTDEEIEQSYEEFYEDVHTEFLKFGELVNFKVCRNGSLHLRGNVYVHYKSLD 322
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEEN---VCNRGGYCNFMH 172
A A ++NGR++AG+ I +F VT ++ A C +Y + C+RG CNF+H
Sbjct: 323 SALIAYSSMNGRYFAGKQITCEFVAVTRWKVAICGEYMRSRFKTCSRGIACNFIH 377
>gi|222623064|gb|EEE57196.1| hypothetical protein OsJ_07143 [Oryza sativa Japonica Group]
Length = 635
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 102/175 (58%), Gaps = 13/175 (7%)
Query: 9 FGTEK--------DRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
FGTE+ D+ +CPF+ K GACR G RCSR+H P S TLL+ NMY P +
Sbjct: 109 FGTEQASSMILFQDKAHCPFHLKTGACRFGVRCSRVHFYPDKSCTLLMRNMYSGPGLALE 168
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
+G +I+ +E+FYED+ E K+GE+ + +C N + H+ GNVYV ++ +
Sbjct: 169 --QDEGLECTDEEIEQSYEEFYEDVHTEFLKFGELVNFKVCRNGSLHLRGNVYVHYKSLD 226
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEEN---VCNRGGYCNFMH 172
A A ++NGR++AG+ I +F VT ++ A C +Y + C+RG CNF+H
Sbjct: 227 SALIAYSSMNGRYFAGKQITCEFVAVTRWKVAICGEYMRSRFKTCSRGIACNFIH 281
>gi|432851674|ref|XP_004067028.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like [Oryzias latipes]
Length = 591
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 98/174 (56%), Gaps = 14/174 (8%)
Query: 9 FGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDP---- 64
+GTE+D NCPF+ K GACR G+RCSR H P+ SPTL++ M+ +T G++
Sbjct: 168 YGTERDVANCPFFLKTGACRFGERCSRKHVYPTSSPTLMIRGMF-----MTFGMEQLRRD 222
Query: 65 ---QGQALD--PRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREE 119
L+ + + F +FY D+ E G++ +C N H+ GNVY+QF +
Sbjct: 223 DYDMDACLEHSEEDLHESFLEFYHDVLPEFKSVGKVVQFKVCCNYEPHLKGNVYIQFETD 282
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL 173
+ AL NGR+YAGR + + SPVT ++ A C ++ C +G +CNF+H+
Sbjct: 283 DQCKEALMKFNGRWYAGRQLQCEISPVTRWKNAICGLFDRRKCPKGKHCNFLHV 336
>gi|334346699|ref|XP_001380936.2| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Monodelphis
domestica]
Length = 466
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/209 (36%), Positives = 106/209 (50%), Gaps = 28/209 (13%)
Query: 10 GTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDP----- 64
TEKD+ NCPFY K G+CR GDRCSR H P+ S TLL+ +M+ IT G++
Sbjct: 163 ATEKDQANCPFYIKTGSCRFGDRCSRKHNYPTSSQTLLIRSMF-----ITFGMEQCRRDD 217
Query: 65 ----QGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
+ F DFYED+ E G++ + N H+ GNVYVQ++ EE
Sbjct: 218 YDTDASLEYSEEETYQQFLDFYEDVLPEFKNVGKVIQFKVSCNFEPHLRGNVYVQYQSEE 277
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKK----- 175
A NGR+YAGR + +FSPVT ++ A C + C RG +CNF+H+ +
Sbjct: 278 ECQAAFSLFNGRWYAGRQLQCEFSPVTRWKMAICGLFGRQKCPRGKHCNFLHVFRNPNNE 337
Query: 176 ---------ISRELRRRLFGRSRRRRSRS 195
+S + FG+S RR R+
Sbjct: 338 FWEANRDIHMSPDWANTSFGKSSERRDRT 366
>gi|205688456|sp|Q6YVX9.2|C3H16_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 16;
Short=OsC3H16
Length = 678
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 99/164 (60%), Gaps = 5/164 (3%)
Query: 12 EKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDP 71
++D+ +CPF+ K GACR G RCSR+H P S TLL+ NMY P + +G
Sbjct: 163 QQDKAHCPFHLKTGACRFGVRCSRVHFYPDKSCTLLMRNMYSGPGLALE--QDEGLECTD 220
Query: 72 RKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNG 131
+I+ +E+FYED+ E K+GE+ + +C N + H+ GNVYV ++ + A A ++NG
Sbjct: 221 EEIEQSYEEFYEDVHTEFLKFGELVNFKVCRNGSLHLRGNVYVHYKSLDSALIAYSSMNG 280
Query: 132 RFYAGRPIIVDFSPVTDFREATCRQYEEN---VCNRGGYCNFMH 172
R++AG+ I +F VT ++ A C +Y + C+RG CNF+H
Sbjct: 281 RYFAGKQITCEFVAVTRWKVAICGEYMRSRFKTCSRGIACNFIH 324
>gi|395841461|ref|XP_003793555.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Otolemur garnettii]
Length = 491
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/261 (34%), Positives = 115/261 (44%), Gaps = 50/261 (19%)
Query: 12 EKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMIT---PGVDPQGQA 68
EKDR NCPFY K GACR GDRCSR H P+ SPTLL+ +M+ M DP
Sbjct: 165 EKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIRSMFTTFGMEQCRRDDYDPDASL 224
Query: 69 -LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALR 127
+ F DFY+D+ E G++ + N H+ GNVYVQ++ EE A
Sbjct: 225 EYSEEETYQQFLDFYDDVLPEFKNVGKVIQFKVSCNWEPHLRGNVYVQYQTEEECQTAFS 284
Query: 128 NLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL-------------- 173
NGR+YAGR + +F PVT ++ A C +E C RG +CNF+H+
Sbjct: 285 LFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHVFRNPNNEFWEANRD 344
Query: 174 ---------KKISRELRRR--------LFGRSRRR---------------RSRSRSRSRS 201
+ L RR +GR RRR R R R +
Sbjct: 345 IYLSPDRTGSSFGKNLERRERTGHHDEYYGRLRRRSPSPDRSYKRNGESERKRRSHREKK 404
Query: 202 PHKYRGGYEERSHGGGRGSGR 222
HK+ ER G RG R
Sbjct: 405 SHKHTSKSCERHSSGNRGRKR 425
>gi|431899712|gb|ELK07664.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2 [Pteropus alecto]
Length = 449
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/166 (42%), Positives = 93/166 (56%), Gaps = 4/166 (2%)
Query: 12 EKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP---GVDPQGQA 68
EKD NCPFY K GACR G+RCSR H P+ SPTLL+ +M+ M DP
Sbjct: 149 EKDPANCPFYNKTGACRFGNRCSRKHNFPTSSPTLLIRSMFTTFGMEQCRRDDYDPDASL 208
Query: 69 -LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALR 127
+ F DFYED+ E G++ + NL H+ GNVYVQ++ +E AL
Sbjct: 209 EYSEEETYQQFLDFYEDVLPEFRNVGKVVQFKVSCNLEPHLRGNVYVQYQSKEECQAALS 268
Query: 128 NLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL 173
NGR+YAGR + +F PVT ++ A C +E C RG +CNF+H+
Sbjct: 269 LFNGRWYAGRQLQCEFCPVTRWKMAICGLFEIQQCPRGKHCNFLHV 314
>gi|395526914|ref|XP_003765599.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Sarcophilus harrisii]
Length = 470
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 94/173 (54%), Gaps = 14/173 (8%)
Query: 10 GTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDP----- 64
TEKD+ NCPFY K G+CR GDRCSR H P+ S TLL+ +M+ IT G++
Sbjct: 164 ATEKDQANCPFYIKTGSCRFGDRCSRKHNYPTSSQTLLIRSMF-----ITFGMEQCRRDD 218
Query: 65 ----QGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
+ F DFYED+ E G++ + N H+ GNVYVQ++ EE
Sbjct: 219 YDTDASLEYSEEETYQQFLDFYEDVLPEFKNVGKVIQFKVSCNFEPHLRGNVYVQYQSEE 278
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL 173
A NGR+YAGR + +FSPVT ++ A C + C RG +CNF+H+
Sbjct: 279 ECQAAFSLFNGRWYAGRQLQCEFSPVTRWKMAICGLFGRQKCPRGKHCNFLHV 331
>gi|21616732|gb|AAM66350.1|AF499017_1 U2 splicing auxiliary factor [Trypanosoma cruzi]
Length = 233
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 112/203 (55%), Gaps = 7/203 (3%)
Query: 18 CPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQA-LDPRKIQD 76
C F+ K+GACRHGD C+++H + + SPT+L MY P I D Q D + ++
Sbjct: 6 CIFFSKMGACRHGDHCTKVHVRSTSSPTVLFLMMYPNPMAIEHIQDRQWDFHFDRKYLKR 65
Query: 77 HFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAG 136
HFE FY++ + + G I L + NL DH++GNVY++F E A++ R L +
Sbjct: 66 HFEHFYKETWRTFMELGRIAELRVVSNLGDHLLGNVYIRFEEAADASHIARELKAKKLNE 125
Query: 137 RPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRL------FGRSRR 190
++ + SPVT+F +A C++ E C RG CN++H+ K+SR+L +L + + +
Sbjct: 126 IILLPELSPVTNFADACCKEDLEGKCGRGAQCNYLHIVKVSRKLMEKLEKEQAKYWKKKE 185
Query: 191 RRSRSRSRSRSPHKYRGGYEERS 213
+ SR R R K RG RS
Sbjct: 186 KHSRGSDRKRERSKDRGRERSRS 208
>gi|340056926|emb|CCC51265.1| putative U2 splicing auxiliary factor [Trypanosoma vivax Y486]
Length = 239
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 100/168 (59%), Gaps = 1/168 (0%)
Query: 18 CPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRK-IQD 76
C F+ K+GACRHGD C+++H +PS SPT+L MY P I D Q RK ++
Sbjct: 6 CIFFSKMGACRHGDHCTKVHVRPSSSPTVLFPLMYPNPMAIEHIHDRQWDFCFERKYLRR 65
Query: 77 HFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAG 136
HFE FY++ + + G I L + NL DH++GNVY++F E AA +R L +
Sbjct: 66 HFEHFYKETWRTFMELGRIAELRVVSNLGDHLLGNVYIRFEESSDAARIVRELKAKKLNE 125
Query: 137 RPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRL 184
++ + SPVT+F +A C++ E C RG CN++H+ K+SR+L +L
Sbjct: 126 IILLPEISPVTNFADACCKEDLEGKCERGTQCNYLHIMKVSRKLMDKL 173
>gi|123474332|ref|XP_001320349.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121903153|gb|EAY08126.1| hypothetical protein TVAG_302130 [Trichomonas vaginalis G3]
Length = 339
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 63/144 (43%), Positives = 89/144 (61%)
Query: 29 HGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKIQDHFEDFYEDLFEE 88
HG+ CSR+H KP +S TLLL+N YQ P + P ++ I+++F++FY D++EE
Sbjct: 2 HGEICSRMHIKPQVSNTLLLANFYQNPYHFMSLLPPDTLIIENETIRNNFDEFYLDVYEE 61
Query: 89 LSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVDFSPVTD 148
L +G I + NL +H++GNV V + E+A A NL GR+Y GRPI V FSPV +
Sbjct: 62 LRTFGPISEFVVSGNLCEHLLGNVLVMYENLENALTAYNNLRGRYYGGRPIDVQFSPVVN 121
Query: 149 FREATCRQYEENVCNRGGYCNFMH 172
F A CRQ++E C CNF+H
Sbjct: 122 FNVAVCRQFKEGKCPHNEKCNFIH 145
>gi|348541563|ref|XP_003458256.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Oreochromis
niloticus]
Length = 595
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 79/215 (36%), Positives = 114/215 (53%), Gaps = 27/215 (12%)
Query: 9 FGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP-----GVD 63
FGTE+D NCPF+ K GACR GDRCSR HT P+ SPTL++ M++ M +D
Sbjct: 169 FGTERDVANCPFFLKTGACRFGDRCSRKHTYPTTSPTLMIRGMFRTFGMEESRRDDYDID 228
Query: 64 PQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAA 123
+ + ++Q+ F +FY D+ E G++ + N H+ GNVYVQF EE
Sbjct: 229 ACLEHSE-EEMQESFLEFYHDVLPEFKSVGKVLQFKVSCNYEPHLRGNVYVQFDTEEQCK 287
Query: 124 NALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL--------KK 175
A NGR+YAGR + + SPVT ++ A C ++ + C +G +CNF+H+ +
Sbjct: 288 EAFIKFNGRWYAGRQLHCEISPVTRWKNAICGLFDRHRCPKGKHCNFLHVFRNPGNEFWE 347
Query: 176 ISRELR----RRLFG---------RSRRRRSRSRS 197
R+L R + G RS R+R SRS
Sbjct: 348 ADRDLHMSPDRSVRGSHRDGWYSSRSWRQRHYSRS 382
>gi|356555094|ref|XP_003545874.1| PREDICTED: zinc finger CCCH domain-containing protein 5-like
[Glycine max]
Length = 518
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 99/167 (59%), Gaps = 3/167 (1%)
Query: 9 FGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQA 68
FGTE+D+ +CPF+ K GAC G RCSR+H P S T L+ NMY P + +G
Sbjct: 178 FGTEQDKAHCPFHLKTGACCFGIRCSRVHFYPDKSSTFLIKNMYNGPGLACDRDQDEGLE 237
Query: 69 LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRN 128
+++ FE+FYED+ E K+GE+ + +C N + H GNVYVQ++ + A A +
Sbjct: 238 YKDEEVERCFEEFYEDVHTEFLKFGEVVNFKVCKNGSFHWRGNVYVQYKSLDSALLAYNS 297
Query: 129 LNGRFYAGRPIIVDFSPVTDFREATCRQYEEN---VCNRGGYCNFMH 172
+NGR++AG+ + F +T ++ A C +Y ++ C+ G CNF+H
Sbjct: 298 VNGRYFAGKQVSCQFVNLTRWKVAICGEYMKSGFKTCSHGTACNFIH 344
>gi|290993180|ref|XP_002679211.1| predicted protein [Naegleria gruberi]
gi|284092827|gb|EFC46467.1| predicted protein [Naegleria gruberi]
Length = 189
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 106/177 (59%), Gaps = 8/177 (4%)
Query: 17 NCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQG--QALDPRKI 74
C FY+KIGACR GDRCS LH KP+ S T+++ +MY P VD G + I
Sbjct: 6 TCTFYWKIGACRLGDRCSHLHQKPAYSQTIMIRHMYPNPKG-AHFVDENGILRPFSQEFI 64
Query: 75 QDHFEDFYEDLFEEL-SKYG-EIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGR 132
++ FE+FY D+F+EL +K G +IE L ICDN +HM GNVY+ A L G+
Sbjct: 65 KEWFENFYADIFKELETKNGIKIEDLYICDNTCEHMFGNVYISLASIPDAQKCYELLKGK 124
Query: 133 FYAGRPIIVDFSPVTDFREATCRQYE---ENVCNRGGYCNFMHLKKISRELRRRLFG 186
++AGR + ++SPV DF EA C+ ++ E C +G CN +H+ + S EL + LFG
Sbjct: 125 YHAGRLLTPEYSPVLDFSEAKCKLFDRGGEEHCPKGANCNNLHVLRPSEELAKHLFG 181
>gi|225554163|gb|EEH02527.1| splicing factor U2AF 23 kDa subunit [Ajellomyces capsulatus G186AR]
Length = 147
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 69/147 (46%), Positives = 93/147 (63%), Gaps = 6/147 (4%)
Query: 69 LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRN 128
++P ++Q+HF+ FYED + E+ KYGE+E + +CDN DH++GNVY +F+ E+ A A
Sbjct: 1 MNPSQLQNHFDAFYEDFWCEMCKYGELEEVVVCDNNNDHLIGNVYARFKYEDSAQQACDA 60
Query: 129 LNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRL---- 184
LN R+YA RPI + SPVTDFREA CR C RGG+CN +H K+ S EL R L
Sbjct: 61 LNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNLIHRKEPSPELERELELST 120
Query: 185 --FGRSRRRRSRSRSRSRSPHKYRGGY 209
+ + R R RS +RS SP R Y
Sbjct: 121 KKWLKMRGRDERSVTRSPSPEPTRRRY 147
>gi|255730555|ref|XP_002550202.1| predicted protein [Candida tropicalis MYA-3404]
gi|240132159|gb|EER31717.1| predicted protein [Candida tropicalis MYA-3404]
Length = 481
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 109/210 (51%), Gaps = 43/210 (20%)
Query: 18 CPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRP-------------------DMI 58
C FY K+GACRH RC++ H P++S T+ +SN+Y P +
Sbjct: 221 CSFYTKVGACRHYGRCTKRHIDPTVSNTIKISNLYPNPLAKYDFPDDEDENSEGSEVEEA 280
Query: 59 TPGVD-----------------------PQGQALDPRKIQDHFEDFYEDLFEELSKYGEI 95
GVD P+ Q L +IQ+ F+ FY+D+F +SK GEI
Sbjct: 281 DAGVDVDVNGNKESASGEKTVSKPSNYEPEVQ-LTEEEIQEKFDLFYKDVFTHISKLGEI 339
Query: 96 ESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCR 155
++L +C+N+ +H+ GNVYVQF + A+ A + LN ++ RP+ SPV DF EA C
Sbjct: 340 KNLVVCENVNNHLNGNVYVQFVRTQEASEASKQLNSEWFNERPVYSTLSPVRDFEEAYCH 399
Query: 156 QYEENVCNRGGYCNFMHLKKISRELRRRLF 185
+Y C G CN+MHL+ + +L ++++
Sbjct: 400 EYSVGACEHGERCNYMHLRYPTPDLEQKMY 429
>gi|410912868|ref|XP_003969911.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Takifugu rubripes]
gi|4741995|gb|AAD28792.1|AF146688_1 U2 small nuclear ribonucleoprotein auxiliary factor subunit-related
protein [Takifugu rubripes]
Length = 605
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 95/169 (56%), Gaps = 4/169 (2%)
Query: 9 FGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQG-- 66
+GTE+D NCPF+ K G+CR GDRCSR H P+ SPT+++ +M++ M D
Sbjct: 165 YGTERDVSNCPFFLKTGSCRFGDRCSRKHVYPTASPTMMIRSMFKTFGMEEARRDDYDID 224
Query: 67 QALD--PRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAAN 124
L+ ++ + F +FY D+ E G++ + N H+ GNVYVQF EE
Sbjct: 225 ACLEHSEEELYESFLEFYHDVLPEFKSVGKVLQFKVSCNHEPHLRGNVYVQFETEEQCKE 284
Query: 125 ALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL 173
A NGR+YAGR + + PVT ++ A C ++ C +G +CNF+H+
Sbjct: 285 AFIKFNGRWYAGRQLHCEMCPVTRWKNAICGLFDRQKCPKGKHCNFLHV 333
>gi|196002924|ref|XP_002111329.1| hypothetical protein TRIADDRAFT_55208 [Trichoplax adhaerens]
gi|190585228|gb|EDV25296.1| hypothetical protein TRIADDRAFT_55208 [Trichoplax adhaerens]
Length = 462
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 89/248 (35%), Positives = 121/248 (48%), Gaps = 16/248 (6%)
Query: 18 CPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQ----GQALDPRK 73
CPF+ K G CR GDRCSRLH P S LL+ NM+ + D Q
Sbjct: 147 CPFFNKTGVCRFGDRCSRLHVHPESSRVLLIPNMFTSIGLSEGLQDEQEFDTNLEYSEND 206
Query: 74 IQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRF 133
++ F +FY D++ E GEI IC N H+ GNVYV+++ EE A R +GR+
Sbjct: 207 LRSQFIEFYNDIYPEFQAAGEIREFKICCNYEPHLRGNVYVEYQSEEECHKAFRMFHGRW 266
Query: 134 YAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKK--ISRELRRRLFGRSRRR 191
YA R + FSPV +++ A C + + C +G +CNF+H+ + +++ R R RR
Sbjct: 267 YAQRQLFCQFSPVNNWKSAICGLFRQKRCPKGKHCNFLHVFENPVAQSTRSAFNDRHRR- 325
Query: 192 RSRSRSRSRSPHKYRGGYEERSHGGGRGSGRRDDDRDHRLHGR-GRRPRSRSPG-----R 245
S + +RS Y G E RS R D R H R RR RSR +
Sbjct: 326 --HSFNNNRSVRDY-GKIENRSSRSDRHRNHDDRVRRSDWHDRHNRRDRSRDNDNYRHEK 382
Query: 246 RGGRSRSP 253
R RSRSP
Sbjct: 383 RSKRSRSP 390
>gi|354479997|ref|XP_003502195.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like [Cricetulus griseus]
gi|344244263|gb|EGW00367.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 1 [Cricetulus griseus]
Length = 427
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 91/166 (54%), Gaps = 4/166 (2%)
Query: 12 EKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDP----QGQ 67
EK R +CPFY K GACR G+RCSR H P+ SPTLL+ +M+ M D
Sbjct: 156 EKYRASCPFYSKTGACRFGNRCSRKHDFPTSSPTLLVKSMFTTFGMEQCRRDDYDSDASL 215
Query: 68 ALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALR 127
+ F DFY D+ E G++ + NL H+ GNVYVQ++ EE AL
Sbjct: 216 EYSEEETYQQFLDFYHDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALS 275
Query: 128 NLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL 173
NGR+YAGR + +F PVT ++ A C YE C +G +CNF+H+
Sbjct: 276 LFNGRWYAGRQLQCEFCPVTRWKIAICGLYEMQKCPKGKHCNFLHV 321
>gi|354498940|ref|XP_003511570.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Cricetulus griseus]
Length = 537
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/264 (34%), Positives = 126/264 (47%), Gaps = 18/264 (6%)
Query: 12 EKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMIT---PGVDPQGQA 68
EKDR NCPFY K GACR GDRCSR H P+ SPTLL+ +M+ M DP
Sbjct: 214 EKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDSSL 273
Query: 69 -LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALR 127
+ F DFY D+ E G++ + NL H+ GNVYVQ++ EE A
Sbjct: 274 EYSEEETYQQFLDFYHDVLPEFKNVGKVVQFKVSCNLEPHLRGNVYVQYQSEEDCQAAFS 333
Query: 128 NLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIS----RELRRR 183
NGR+YAGR + +F PVT ++ A C +E C RG +CNF+H+ + RE R
Sbjct: 334 LFNGRWYAGRQLQCEFCPVTRWKMAICGLFEVQQCPRGKHCNFLHVFRNPNNEFREANRD 393
Query: 184 LF-----GRSRRRRSRSRSRSRSPHKYRGGYEERSHGGGRGSGRRDDDRDHRLHGRG-RR 237
++ S ++ R P Y Y +G R D ++ +G R+
Sbjct: 394 IYQSPDWTSSSFGKNFEREGGEGPSHYDDIY----YGRSRRRRSLSPDLSYKRNGESDRK 449
Query: 238 PRSRSPGRRGGRSRSPGARRRSPV 261
RS G++ + + RRS +
Sbjct: 450 SRSNHRGKKSHKHVTKSRERRSSL 473
>gi|71747034|ref|XP_822572.1| U2 splicing auxiliary factor [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|70832240|gb|EAN77744.1| U2 splicing auxiliary factor, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
gi|261332325|emb|CBH15319.1| U2 splicing auxiliary factor, putative [Trypanosoma brucei
gambiense DAL972]
Length = 247
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 100/168 (59%), Gaps = 1/168 (0%)
Query: 18 CPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRK-IQD 76
C F+ K+GACRHGD C+++H +P+ SPT+L MY P I D + RK ++
Sbjct: 6 CIFFSKMGACRHGDGCTKVHVRPTTSPTVLFPFMYPNPAAIEHIQDREWNFHFERKYLRR 65
Query: 77 HFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAG 136
HFE FY++ + + G I L + NL DH++GNVY++F + A+ +R L +
Sbjct: 66 HFEHFYKETWRTFMELGRIAELRVVSNLGDHLLGNVYIRFEDSHDASRIVRELKAKKLND 125
Query: 137 RPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRL 184
++ + SPVT+F EA C++ E C RG CN++H+ K+SR+L +L
Sbjct: 126 IVLLPELSPVTNFAEACCKEDLEGKCERGPQCNYLHIMKVSRKLMEKL 173
>gi|302307163|ref|NP_983740.2| ADL355Wp [Ashbya gossypii ATCC 10895]
gi|299788867|gb|AAS51564.2| ADL355Wp [Ashbya gossypii ATCC 10895]
gi|374106953|gb|AEY95861.1| FADL355Wp [Ashbya gossypii FDAG1]
Length = 192
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/169 (40%), Positives = 96/169 (56%), Gaps = 10/169 (5%)
Query: 24 IGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKIQDHFEDFYE 83
IGACRHGD+CS+ H P S T+++ NMY P D + + FE FYE
Sbjct: 2 IGACRHGDKCSKRHNSPINSYTIVIYNMYV----------PPRDYKDLHALTEDFESFYE 51
Query: 84 DLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVDF 143
D+F E +++GE++ L +C+N DH+ GNVY+++ + A A L R+Y RP+ D
Sbjct: 52 DVFLEAARFGEVQELIVCENKTDHLNGNVYIRYSTIDAAKAARDALITRWYGERPLYCDL 111
Query: 144 SPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRRRR 192
S VTDFREA C+ YEE C+RG CNF+H + I + L + R
Sbjct: 112 SHVTDFREAVCKSYEEGTCDRGEQCNFIHRRIIGYHIANGLMLSQWKSR 160
>gi|2842648|sp|Q62377.1|U2AFM_MOUSE RecName: Full=U2 small nuclear ribonucleoprotein auxiliary factor
35 kDa subunit-related protein 2; AltName: Full=CCCH
type zinc finger, RNA-binding motif and serine/arginine
rich protein 2; AltName: Full=U2(RNU2) small nuclear RNA
auxiliary factor 1-like 2; AltName: Full=U2AF35-related
protein; Short=URP
gi|927659|dbj|BAA08143.1| U2af1-rs2 [Mus musculus]
Length = 462
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/245 (35%), Positives = 114/245 (46%), Gaps = 26/245 (10%)
Query: 12 EKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMIT---PGVDPQGQA 68
EKDR NCPFY K GACR GDRCSR H P+ SPTLL+ M+ M DP
Sbjct: 170 EKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKGMFTTFGMEQCRRDDYDPDSSL 229
Query: 69 -LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALR 127
+I F DFY D+ E G++ + NL H+ GNVYVQ++ EE A
Sbjct: 230 EFSEEEIYQQFLDFYYDVLPEFKSVGKVIQFKVSCNLEPHLRGNVYVQYQSEEDCQAAFS 289
Query: 128 NLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL----KKISRELRRR 183
NGR+YAGR + +F PVT ++ A C +E C RG +CNF+H+ R+ R
Sbjct: 290 VFNGRWYAGRQLQCEFCPVTRWKMAICGLFEVQQCPRGKHCNFLHVFRNPNNEYRDANRD 349
Query: 184 LF------GRSRRRRSRSRSRSRSPHKYRGG------------YEERSHGGGRGSGRRDD 225
L+ S + S R R+ +Y G Y+ + S R
Sbjct: 350 LYPSPDWTSSSFGKNSERRERASHYDEYYGRSRRRRRSPSPDFYKRNGESDRKSSSRHRV 409
Query: 226 DRDHR 230
+ HR
Sbjct: 410 KKSHR 414
>gi|340508294|gb|EGR34030.1| zinc finger protein, putative [Ichthyophthirius multifiliis]
Length = 126
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 64/128 (50%), Positives = 90/128 (70%), Gaps = 5/128 (3%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE L+ ++GTE+D+VNCPFYFKIG+CR+ ++C R+H +PS S T+L+ +MY T
Sbjct: 1 MAEKLSRMYGTEEDKVNCPFYFKIGSCRYENKCLRIHNRPSESQTVLIKHMYTSSA--TE 58
Query: 61 GVDPQGQALDPRKIQ---DHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFR 117
QG + +I+ D FE+FYE++F EL+ YGEI+ L ICDN+ DHM GNVYV++
Sbjct: 59 LALAQGNRVSEEEIKKALDTFEEFYEEVFLELANYGEIDDLIICDNIGDHMRGNVYVKYI 118
Query: 118 EEEHAANA 125
+E AAN
Sbjct: 119 KESSAANV 126
>gi|281354289|gb|EFB29873.1| hypothetical protein PANDA_009769 [Ailuropoda melanoleuca]
Length = 204
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 69/140 (49%), Positives = 84/140 (60%), Gaps = 40/140 (28%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLH KP+
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPT------------------- 41
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREE 119
F +++F EL KYGEIE +N+CDNL DH+VGNVYV+FR E
Sbjct: 42 --------------------FSQEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRRE 81
Query: 120 EHAANALRNLNGRFYAGRPI 139
E A A+ LN R++ G+ +
Sbjct: 82 EDAERAVAELNNRWFNGQAV 101
>gi|62945360|ref|NP_001017504.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 1 [Rattus norvegicus]
gi|55778495|gb|AAH86322.1| Zinc finger (CCCH type), RNA binding motif and serine/arginine rich
1 [Rattus norvegicus]
Length = 428
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 91/166 (54%), Gaps = 4/166 (2%)
Query: 12 EKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDP----QGQ 67
EK R +CPFY K GACR G+RCSR H P+ SPTLL+ +M+ M D
Sbjct: 158 EKYRPSCPFYNKTGACRFGNRCSRKHDFPTSSPTLLVKSMFTTFGMEQCRRDDYDSDANL 217
Query: 68 ALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALR 127
+ F DFY D+ E G++ + NL H+ GNVYVQ++ EE AL
Sbjct: 218 EYSEEETYQQFLDFYHDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALS 277
Query: 128 NLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL 173
NGR+YAGR + +F PVT ++ A C +E C +G +CNF+H+
Sbjct: 278 LFNGRWYAGRQLQCEFCPVTRWKVAICGLFEMQKCPKGKHCNFLHV 323
>gi|546061|gb|AAB30301.1| human U2af35 homolog [Mus musculus]
Length = 428
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 91/166 (54%), Gaps = 4/166 (2%)
Query: 12 EKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDP----QGQ 67
EK R +CPFY K GACR G+RCSR H P+ SPTLL+ +M+ M D
Sbjct: 157 EKYRPSCPFYNKTGACRFGNRCSRKHDFPTSSPTLLVKSMFTTFGMEQCRRDDYDSDANL 216
Query: 68 ALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALR 127
+ F DFY D+ E G++ + NL H+ GNVYVQ++ EE AL
Sbjct: 217 EYSEEETYQQFLDFYHDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALS 276
Query: 128 NLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL 173
NGR+YAGR + +F PVT ++ A C +E C +G +CNF+H+
Sbjct: 277 LFNGRWYAGRQLQCEFCPVTRWKVAICGLFEMQKCPKGKHCNFLHV 322
>gi|26326547|dbj|BAC27017.1| unnamed protein product [Mus musculus]
Length = 428
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 91/166 (54%), Gaps = 4/166 (2%)
Query: 12 EKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDP----QGQ 67
EK R +CPFY K GACR G+RCSR H P+ SPTLL+ +M+ M D
Sbjct: 157 EKYRPSCPFYNKTGACRFGNRCSRKHDFPTSSPTLLVKSMFTTFGMEQCRRDDYDSDANL 216
Query: 68 ALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALR 127
+ F DFY D+ E G++ + NL H+ GNVYVQ++ EE AL
Sbjct: 217 EYSEEETYQQFLDFYHDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALS 276
Query: 128 NLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL 173
NGR+YAGR + +F PVT ++ A C +E C +G +CNF+H+
Sbjct: 277 LFNGRWYAGRQLQCEFCPVTRWKVAICGLFEMQKCPKGKHCNFLHV 322
>gi|6755917|ref|NP_035793.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 1 [Mus musculus]
gi|2842676|sp|Q64707.1|U2AFL_MOUSE RecName: Full=U2 small nuclear ribonucleoprotein auxiliary factor
35 kDa subunit-related protein 1; AltName: Full=CCCH
type zinc finger, RNA-binding motif and serine/arginine
rich protein 1; AltName: Full=SP2; AltName:
Full=U2(RNU2) small nuclear RNA auxiliary factor 1-like
1
gi|12044258|gb|AAG47771.1|AF309654_1 U2AF small subunit-related protein [Mus musculus]
gi|544778|gb|AAB29564.1| SP2=U2 small nuclear ribonucleoprotein auxiliary factor small
subunit homolog [mice, brain, Peptide, 428 aa]
gi|575893|dbj|BAA04230.1| SP2 [Mus musculus]
gi|1468962|dbj|BAA05486.1| U2AF small subunit-related protein [Mus musculus]
gi|22255349|dbj|BAC07536.1| U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) related
protein [Mus musculus]
gi|124376102|gb|AAI32556.1| Zrsr1 protein [Mus musculus]
gi|148675928|gb|EDL07875.1| U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1,
related sequence 1 [Mus musculus]
gi|223460302|gb|AAI38595.1| Zrsr1 protein [Mus musculus]
Length = 428
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 91/166 (54%), Gaps = 4/166 (2%)
Query: 12 EKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDP----QGQ 67
EK R +CPFY K GACR G+RCSR H P+ SPTLL+ +M+ M D
Sbjct: 157 EKYRPSCPFYNKTGACRFGNRCSRKHDFPTSSPTLLVKSMFTTFGMEQCRRDDYDSDANL 216
Query: 68 ALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALR 127
+ F DFY D+ E G++ + NL H+ GNVYVQ++ EE AL
Sbjct: 217 EYSEEETYQQFLDFYHDVLPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALS 276
Query: 128 NLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL 173
NGR+YAGR + +F PVT ++ A C +E C +G +CNF+H+
Sbjct: 277 LFNGRWYAGRQLQCEFCPVTRWKVAICGLFEMQKCPKGKHCNFLHV 322
>gi|156537789|ref|XP_001608048.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Nasonia vitripennis]
Length = 721
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 97/172 (56%), Gaps = 6/172 (3%)
Query: 5 LASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDP 64
L S+ T+ + CPF+ K GACR+GD CSR H +P +S +L+ N Y + +
Sbjct: 162 LRSLNETQPGKEICPFFNKTGACRYGDICSRNHQRPGLSTVILVPNFYTHFSLERHSHEY 221
Query: 65 QGQA---LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEH 121
D R+ ++HF DFY D+ EL K+G+I++L C N H+ GN+YV++ E
Sbjct: 222 DTDVRLEYDHRETRNHFRDFYFDVVPELEKFGKIKTLQYCKNTEAHLRGNLYVEYATERE 281
Query: 122 AANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL 173
AA ALR L GR+YAGR + +F + +R A C C +G CNF+H+
Sbjct: 282 AARALRGLKGRWYAGRQLHCEFVNLKSWRGAICGMMR---CPKGSACNFLHV 330
>gi|297739459|emb|CBI29641.3| unnamed protein product [Vitis vinifera]
Length = 875
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 104/192 (54%), Gaps = 28/192 (14%)
Query: 9 FGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDM----------- 57
FGTE+D+ +CPF+ K GACR G RCSR+H P S TLL+ NMY P +
Sbjct: 194 FGTEQDKDHCPFHIKTGACRFGQRCSRVHFYPDKSCTLLIKNMYNGPGLAWEQDEGLEKF 253
Query: 58 ----------ITPGVDPQGQALDP----RKIQDHFEDFYEDLFEELSKYGEIESLNICDN 103
P + + +P +++ +E+FYED+ E K+GEI + +C N
Sbjct: 254 ISRFIWWSSWFWPWLGWTCRRQNPLYTDEEVERCYEEFYEDVQTEFLKFGEIVNFKVCRN 313
Query: 104 LADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEEN--- 160
+ H+ GNVYV ++ + A A ++NG +YAG+ + +F VT ++ A C +Y ++
Sbjct: 314 GSFHLRGNVYVHYKSLDSAVLAYHSINGLYYAGKQVTCEFVGVTRWKVAICGEYMKSRFK 373
Query: 161 VCNRGGYCNFMH 172
C+ G CNF+H
Sbjct: 374 TCSHGTACNFIH 385
>gi|390363017|ref|XP_788119.3| PREDICTED: uncharacterized protein LOC583099 [Strongylocentrotus
purpuratus]
Length = 746
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 88/167 (52%), Gaps = 4/167 (2%)
Query: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQR----PDMITPGVDPQG 66
EK C F+ K GACR +RCSR H P TL++ MY PD G
Sbjct: 177 AEKKEEICSFFLKTGACRFKERCSRTHPYPEQGTTLMIPGMYTNFGLGPDFKDEYDADVG 236
Query: 67 QALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANAL 126
D +F +FYED+ E +YGE+ L +C N H+ GNVYVQ+R EE AA A
Sbjct: 237 LECDEESAYLNFHEFYEDVLPEFREYGEVVQLKVCRNWEPHLRGNVYVQYRSEEEAAKAA 296
Query: 127 RNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL 173
+ GRFY G+ + + PV+ ++ A C + + C RG +CNF+H+
Sbjct: 297 QVFAGRFYGGKQLDPRYCPVSRWKPAICGLFHRDKCPRGKHCNFLHV 343
>gi|114676797|ref|XP_512599.2| PREDICTED: splicing factor U2AF 26 kDa subunit isoform 4 [Pan
troglodytes]
gi|410220668|gb|JAA07553.1| U2 small nuclear RNA auxiliary factor 1-like 4 [Pan troglodytes]
gi|410247510|gb|JAA11722.1| U2 small nuclear RNA auxiliary factor 1-like 4 [Pan troglodytes]
gi|410287276|gb|JAA22238.1| U2 small nuclear RNA auxiliary factor 1-like 4 [Pan troglodytes]
gi|410329231|gb|JAA33562.1| U2 small nuclear RNA auxiliary factor 1-like 4 [Pan troglodytes]
Length = 202
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 86/158 (54%), Gaps = 40/158 (25%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIG CRHGDRCSRLH KP+
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGVCRHGDRCSRLHNKPT------------------- 41
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREE 119
F +++F EL KYGEIE +N+CDNL DH+VGNVYV+FR E
Sbjct: 42 --------------------FSQEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRRE 81
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQY 157
E A+ LN R++ G+ + + V C +
Sbjct: 82 EDGERAVAELNNRWFNGQAVHGNVPEVASATSCICGPF 119
>gi|397490403|ref|XP_003816194.1| PREDICTED: splicing factor U2AF 26 kDa subunit isoform 1 [Pan
paniscus]
Length = 202
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 86/158 (54%), Gaps = 40/158 (25%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIG CRHGDRCSRLH KP+
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGVCRHGDRCSRLHNKPT------------------- 41
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREE 119
F +++F EL KYGEIE +N+CDNL DH+VGNVYV+FR E
Sbjct: 42 --------------------FSQEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRRE 81
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQY 157
E A+ LN R++ G+ + + V C +
Sbjct: 82 EDGERAVAELNNRWFNGQAVHGNVPEVASATSCICGPF 119
>gi|383865202|ref|XP_003708064.1| PREDICTED: uncharacterized protein LOC100879762 [Megachile
rotundata]
Length = 620
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 138/293 (47%), Gaps = 27/293 (9%)
Query: 3 EHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGV 62
E L + ++ + CPF+ K GACR+GD CSR H + +S +L+ Y +
Sbjct: 162 EALREVIESQPGKELCPFFNKTGACRYGDTCSRNHRRVCLSKVILVPGFYTHFSLEKNSA 221
Query: 63 DPQ---GQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREE 119
+ + + + HF +FY+D+ EL +G I++L C N H+ GN+YV++ E
Sbjct: 222 EYDTDIALEFETSETRQHFREFYKDVVPELESFGRIKTLKYCCNTEIHLRGNLYVEYYTE 281
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMH------- 172
AA ALR L GR+YAGR + +F + +R A C + C +G CNF+H
Sbjct: 282 REAARALRRLKGRWYAGRQLNCEFVNLKSWRSAVCGM---SKCPKGRACNFLHTFKNPYN 338
Query: 173 ---LKKISRELRRRLFGRSRRRRSRSRSRSRSPHKYRGGYEERSHGGGRGSGRRDDDRDH 229
+K R +++L S S RS RS K+ G + R S + + +H
Sbjct: 339 EYDIKSPPRWTKQQLLSSSHEVASSRRSEHRSKSKWEDGSDVEQGKNWRWSESPEVEVEH 398
Query: 230 RLHGRGRRPR---SRSPGRRGGRSR--------SPGARRRSPVRESSVERRAK 271
R +R R + P ++ R + +P RRRS + S+E +AK
Sbjct: 399 RSKTTDKRHRYSDEKDPRQKSTRDKRCDLSERDTPVKRRRSNSEKRSLEEKAK 451
>gi|426388320|ref|XP_004060589.1| PREDICTED: splicing factor U2AF 26 kDa subunit [Gorilla gorilla
gorilla]
Length = 202
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 85/158 (53%), Gaps = 40/158 (25%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLH K
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNK--------------------- 39
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREE 119
F +++F EL KYGEIE +N+CDNL DH+VGNVYV+FR E
Sbjct: 40 ------------------STFSQEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRRE 81
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQY 157
E A+ LN R++ G+ + + V C +
Sbjct: 82 EDGQWAVAELNNRWFNGQAVHGNVPEVASATSCICSPF 119
>gi|260796659|ref|XP_002593322.1| hypothetical protein BRAFLDRAFT_119587 [Branchiostoma floridae]
gi|229278546|gb|EEN49333.1| hypothetical protein BRAFLDRAFT_119587 [Branchiostoma floridae]
Length = 571
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 89/165 (53%), Gaps = 12/165 (7%)
Query: 17 NCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMY--------QRPDMITPGVDPQGQA 68
+CPF+ K GACR GDRCSR HT+P S TLL++ M+ QR D G+
Sbjct: 129 DCPFFKKTGACRFGDRCSRKHTRPDSSTTLLIAGMFATFALDQTQRDDFDETMYLEYGED 188
Query: 69 LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRN 128
++ F +FY D E G + +C N H+ GNVYVQ+ EE A+R
Sbjct: 189 ----ELYKDFIEFYNDTLPEFRTLGRVVQFKVCCNHEPHLRGNVYVQYEREEDCLEAIRK 244
Query: 129 LNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL 173
+GRFYAG+ + + +PVT ++ A C + C +G +CNF+H+
Sbjct: 245 FHGRFYAGKQLTCEMTPVTSWKSAICGLFSRKRCPKGKHCNFLHV 289
>gi|291239418|ref|XP_002739620.1| PREDICTED: U2 small nuclear RNA auxiliary factor 1-like 2-like,
partial [Saccoglossus kowalevskii]
Length = 641
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 88/170 (51%), Gaps = 4/170 (2%)
Query: 8 IFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQ 67
+ +K C F+ K GACR GDRCSR H S+S TL++ M+ M D
Sbjct: 24 MIKADKPTEKCSFFIKTGACRFGDRCSRYHPPTSVSTTLVIPKMFSNFSMEQCMRDEYDT 83
Query: 68 AL----DPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAA 123
+ D + F FY+D+ E GE+ +C N H+ GNVYVQ+ E+ +
Sbjct: 84 DICLEFDEKDAYADFLSFYDDVLGEFRALGEVIQFKVCCNWEPHLRGNVYVQYNSEDECS 143
Query: 124 NALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL 173
A+ NGR+YAG+ + + P+T ++ A C + + C +G +CNF+H+
Sbjct: 144 KAISMFNGRYYAGKQLTCLYCPITKWKSAICGLFAKKRCPKGKHCNFLHV 193
>gi|359392870|gb|AEV45842.1| rough endosperm 3 epsilon isoform [Zea mays]
Length = 368
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 91/149 (61%), Gaps = 2/149 (1%)
Query: 9 FGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQA 68
FGTE+D+ +CPF+ K GACR G RCSR+H P S TLL+ NMY P + +G
Sbjct: 217 FGTEQDKAHCPFHLKTGACRFGLRCSRVHFYPDKSITLLMKNMYNGPGLALE--QDEGLE 274
Query: 69 LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRN 128
+I+ +E+FYED+ E K+GE+ + +C N + H+ GNVYV ++ + A A +
Sbjct: 275 FTDEEIEQSYEEFYEDVHTEFLKFGELVNFKVCRNGSFHLRGNVYVHYKSLDSALLAYSS 334
Query: 129 LNGRFYAGRPIIVDFSPVTDFREATCRQY 157
+NGR++AG+ I +F VT ++ A C +
Sbjct: 335 MNGRYFAGKQITCEFVAVTRWKAAICDMF 363
>gi|94536807|ref|NP_659424.2| splicing factor U2AF 26 kDa subunit isoform 2 [Homo sapiens]
gi|261861058|dbj|BAI47051.1| U2 small nuclear RNA auxiliary factor 1-like 4 [synthetic
construct]
Length = 202
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/158 (43%), Positives = 86/158 (54%), Gaps = 40/158 (25%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIG CRHGDRCSRLH KP+
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGVCRHGDRCSRLHNKPT------------------- 41
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREE 119
F +++F EL KYGEIE +N+CDNL DH+VGNVYV+FR E
Sbjct: 42 --------------------FSQEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRRE 81
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQY 157
E A+ L+ R++ G+ + + V C +
Sbjct: 82 EDGERAVAELSNRWFNGQAVHGNVPEVASATSCICGPF 119
>gi|18088983|gb|AAH21186.1| U2 small nuclear RNA auxiliary factor 1-like 4 [Homo sapiens]
gi|123983214|gb|ABM83348.1| U2 small nuclear RNA auxiliary factor 1-like 4 [synthetic
construct]
gi|123997921|gb|ABM86562.1| U2 small nuclear RNA auxiliary factor 1-like 4 [synthetic
construct]
Length = 202
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/158 (43%), Positives = 86/158 (54%), Gaps = 40/158 (25%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIG CRHGDRCSRLH KP+
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGVCRHGDRCSRLHNKPT------------------- 41
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREE 119
F +++F EL KYGEIE +N+CDNL DH+VGNVYV+FR E
Sbjct: 42 --------------------FSQEVFTELQEKYGEIEEMNVCDNLGDHVVGNVYVKFRRE 81
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQY 157
E A+ L+ R++ G+ + + V C +
Sbjct: 82 EDGERAVAELSNRWFNGQAVHGNVPEVASATSCICGPF 119
>gi|226489603|emb|CAX74952.1| Splicing factor U2AF 35 kDa subunit [Schistosoma japonicum]
Length = 123
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 56/88 (63%), Positives = 71/88 (80%)
Query: 98 LNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQY 157
+N+CDNL DH+VGNVY++FR EE A A+++LN R++ GRP+ + SPVTDFREA CRQY
Sbjct: 1 MNVCDNLGDHLVGNVYIKFRREEDAEKAVQDLNERWFGGRPVHAELSPVTDFREACCRQY 60
Query: 158 EENVCNRGGYCNFMHLKKISRELRRRLF 185
E C RGG+CNFMHLK ISREL R+L+
Sbjct: 61 ELGECTRGGFCNFMHLKPISRELCRKLY 88
>gi|441627326|ref|XP_004089246.1| PREDICTED: splicing factor U2AF 26 kDa subunit [Nomascus
leucogenys]
Length = 202
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 87/158 (55%), Gaps = 40/158 (25%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VN FYFKIGACRHGDRCSRLH KP+
Sbjct: 1 MAEYLASIFGTEKDKVNRSFYFKIGACRHGDRCSRLHNKPT------------------- 41
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREE 119
F +++F EL KYGEIE +N+CDNL DH+VGNVYV+FR E
Sbjct: 42 --------------------FSQEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRRE 81
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQY 157
E A A+ L+ R++ G+ + + V C +
Sbjct: 82 EDAERAVAELSNRWFNGQAVHGNVPEVASATSCICDPF 119
>gi|156838866|ref|XP_001643131.1| hypothetical protein Kpol_455p4 [Vanderwaltozyma polyspora DSM
70294]
gi|156113726|gb|EDO15273.1| hypothetical protein Kpol_455p4 [Vanderwaltozyma polyspora DSM
70294]
Length = 190
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 107/185 (57%), Gaps = 17/185 (9%)
Query: 14 DRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNM--YQRPDMITPGVDPQGQALDP 71
DR C FY+K+G CRHG++CS+ H P+ S ++++ NM +Q VD
Sbjct: 18 DRERCHFYYKVGVCRHGNKCSKKHIPPANSRSIVVLNMIAFQSDGTRMSDVD-------- 69
Query: 72 RKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNG 131
F+ +YED+F EL K+G+I+S I +N DH+ GNVY + A A +LN
Sbjct: 70 ------FDGYYEDVFIELCKFGKIKSFLITENGNDHLRGNVYALYDNVRSAKEARDSLNT 123
Query: 132 RFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRRR 191
R+Y +P+ D + + DF +A CR+Y+ C+RG CNFMH+++ S L+ L RS+ +
Sbjct: 124 RWYNEKPLYSDLTHIVDFNDAICRKYDVGSCDRGNECNFMHVRRPSPSLKSDL-DRSQAK 182
Query: 192 RSRSR 196
+ +S+
Sbjct: 183 KWQSQ 187
>gi|397606182|gb|EJK59239.1| hypothetical protein THAOC_20568 [Thalassiosira oceanica]
Length = 109
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/99 (57%), Positives = 76/99 (76%)
Query: 69 LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRN 128
+D K ++ F FYED +EELSK+G IE+L+ICDNL DHM+G+ Y +F EEE AA+AL
Sbjct: 10 IDEAKAKEDFLSFYEDFYEELSKFGRIEALHICDNLGDHMLGHAYCKFSEEEEAADALNV 69
Query: 129 LNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGY 167
+NGR+Y GR + V+FSPV DFREA CR ++E+ C RGG+
Sbjct: 70 MNGRYYDGRQMEVEFSPVLDFREARCRDFDEDSCRRGGF 108
>gi|396082086|gb|AFN83698.1| U2 small nuclear RNA auxillary factor [Encephalitozoon romaleae
SJ-2008]
Length = 259
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 94/170 (55%), Gaps = 7/170 (4%)
Query: 18 CPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKIQDH 77
C FY K CR+G C++ H P+ S +++ NMY + P DP + LD +Q H
Sbjct: 8 CIFYSKTNGCRYGLECTKAHRIPARSKVVVVKNMY-----LYPKNDPDSK-LDNEAVQIH 61
Query: 78 FEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAG 136
+ FYED F E+S KYG + L I N + ++GN+Y++F +E+ + + ++ R+Y+G
Sbjct: 62 LDLFYEDWFSEVSMKYGAVRMLAIASNSSLQLLGNIYIEFEDEKASLRCIEDIGKRYYSG 121
Query: 137 RPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFG 186
+ I+V+ + C YE+ +C +G C F+H+ K++ L LF
Sbjct: 122 KRIVVELGNCYRISDGVCTDYEKGLCGKGERCGFIHVAKVTESLMEELFA 171
>gi|406603045|emb|CCH45380.1| Splicing factor U2af small subunit A [Wickerhamomyces ciferrii]
Length = 160
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 92/159 (57%), Gaps = 9/159 (5%)
Query: 48 LSNMYQRPDM-------ITPGVDPQGQALDPRKIQD--HFEDFYEDLFEELSKYGEIESL 98
++N+YQ PD+ + P+ Q+ F+DFY+D+F E S G+I+ L
Sbjct: 1 MTNLYQNPDVSRDHNNNTNSKTESNELPTIPKDQQEVIKFDDFYKDIFIESSLIGQIDEL 60
Query: 99 NICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYE 158
+C+N DH+ GNVYV+F EE A A + R+Y +PI + SPV DFR +TCRQ++
Sbjct: 61 TVCENHNDHLNGNVYVKFNSEEAATKARDLFSTRWYNSKPIYCELSPVVDFRGSTCRQHD 120
Query: 159 ENVCNRGGYCNFMHLKKISRELRRRLFGRSRRRRSRSRS 197
C+RGG CNFMH+K+ SR+L + L R+ +S
Sbjct: 121 SKTCDRGGMCNFMHVKRPSRDLLKTLKLSQRKYYQEKKS 159
>gi|47230617|emb|CAF99810.1| unnamed protein product [Tetraodon nigroviridis]
Length = 471
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 97/199 (48%), Gaps = 34/199 (17%)
Query: 9 FGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDP--QG 66
+GTE+D NCPF+ K G+CR GDRCSR H P+ SPTL++ +M++ M D
Sbjct: 152 YGTERDISNCPFFLKTGSCRFGDRCSRKHVYPTASPTLMIRSMFKTFGMEEARRDDYDMD 211
Query: 67 QALD--PRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAAN 124
L+ ++ + F +FY D+ E G++ + N H+ GNVYVQF EE
Sbjct: 212 ACLEHSEEELYESFLEFYHDVLPEFKSVGKVLQFKVSCNHEPHLRGNVYVQFGSEEQCKE 271
Query: 125 ALRNLNGRFYAGRPIIVDFSPVTDFREATCRQ---------------------------- 156
AL NGR+YAGR + + PVT ++ A C Q
Sbjct: 272 ALIKFNGRWYAGRQLHCEMCPVTRWKNAICGQLLLSHHIRAHSNVHALDLPLRMCFVFLP 331
Query: 157 --YEENVCNRGGYCNFMHL 173
++ C +G +CNF+H+
Sbjct: 332 GLFDRQKCPKGKHCNFLHV 350
>gi|307200055|gb|EFN80401.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2 [Harpegnathos saltator]
Length = 490
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 90/173 (52%), Gaps = 6/173 (3%)
Query: 3 EHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGV 62
E L + T+ + CPF+ K GACR+GD+CS+ H +S +L+ Y +
Sbjct: 160 EALREVSETQPGKELCPFFMKTGACRYGDKCSKNHRAVFLSKVILIPGFYSHFSLEKNSA 219
Query: 63 DPQGQA---LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREE 119
+ + + HF +FYED+ EL YG+I L C N H+ GN+YV+++ E
Sbjct: 220 EYDTDVSLEFETSETWQHFREFYEDVITELESYGKISVLRCCCNTETHLRGNLYVEYQTE 279
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMH 172
A A + LNGR+YAG+ + +F + +R A C + C +G CNF+H
Sbjct: 280 REATRAWKRLNGRWYAGKQLRCEFVNLISWRNAICGM---SKCPKGTACNFLH 329
>gi|401881081|gb|EJT45386.1| splicing factor [Trichosporon asahii var. asahii CBS 2479]
Length = 128
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 79/130 (60%), Gaps = 5/130 (3%)
Query: 37 HTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIE 96
H KP S T+LL N+Y P P+G + ++Q F+ FYED F EL KYG ++
Sbjct: 4 HIKPQFSQTVLLPNVYNNPSHT-----PEGLTMTKDELQADFDRFYEDFFIELCKYGNVQ 58
Query: 97 SLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQ 156
+++CDN+ DH+ GNVYV++ E A A+ LN R+Y RP+ + SPV+DFREA CRQ
Sbjct: 59 EMHVCDNIGDHLEGNVYVRYEWEAEANKAVEQLNNRWYGMRPLHAELSPVSDFREACCRQ 118
Query: 157 YEENVCNRGG 166
E C R G
Sbjct: 119 NELGECKREG 128
>gi|401828573|ref|XP_003888000.1| hypothetical protein EHEL_091240 [Encephalitozoon hellem ATCC
50504]
gi|392999008|gb|AFM99019.1| hypothetical protein EHEL_091240 [Encephalitozoon hellem ATCC
50504]
Length = 257
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 112/233 (48%), Gaps = 10/233 (4%)
Query: 18 CPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKIQDH 77
C FY K CR+G C++ H PS S +++ NMY + P DP+ L +Q H
Sbjct: 8 CIFYSKTNGCRYGLECTKAHRIPSRSKVVVIKNMY-----LYPRNDPES-VLSKDAVQIH 61
Query: 78 FEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAG 136
+ FYED F E+S KYG + L I N++ ++GN+Y++F EE A + + R+Y G
Sbjct: 62 LDLFYEDWFSEMSVKYGAVRMLAIASNISPQLLGNIYIEFEEERAALRCMEEIGKRYYCG 121
Query: 137 RPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRRRRSRSR 196
+ I+V+ + C +E+++C +G C F+H+ K + L L R ++
Sbjct: 122 KRIVVELGNCYRISDGVCTDHEKDLCAKGERCGFIHVAKATASLVEELLASQRLLYTQIG 181
Query: 197 SRSRSPHKYRGGYEERSHGGGRGSGRRDDDRDHRLHGRGRRPRSRSPGRRGGR 249
S ++ R + + G RD +R H RR S+ +R R
Sbjct: 182 SMGKNRPDERNITSQANWVEG---SLRDGNRIENYHADRRRLESQENAKRSKR 231
>gi|193788564|ref|NP_001123327.1| zinc finger protein ZF(C3H)-13 [Ciona intestinalis]
gi|93003114|tpd|FAA00140.1| TPA: zinc finger protein [Ciona intestinalis]
Length = 479
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 92/167 (55%), Gaps = 11/167 (6%)
Query: 18 CPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMY--------QRPDMITPGVDPQGQAL 69
C F+ ++GACR GD CS+LH KP+ S TLLL +M+ R D AL
Sbjct: 211 CYFFERVGACRFGDSCSKLHEKPTSSRTLLLPSMFNTFAFDIASRASRSNVHGDSSDLAL 270
Query: 70 D--PRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALR 127
+ + + FE FY+D+F E +K+G +E L +C N H+ GNVYVQ+ A A +
Sbjct: 271 EHSDEDLYEDFEVFYDDVFPEFNKFGHVEQLKVCCNRDQHLRGNVYVQYATVSQAETAFQ 330
Query: 128 NLNGRFYAGRPIIVDFSPVTDFREATCRQYEEN-VCNRGGYCNFMHL 173
+LNGRFY G+ + + + + A C Y C RGG+CNF+H+
Sbjct: 331 SLNGRFYGGKLLQCMYVTILSWSSAICGLYCTGRPCPRGGHCNFLHV 377
>gi|158299259|ref|XP_319372.4| AGAP010194-PA [Anopheles gambiae str. PEST]
gi|157014279|gb|EAA13785.4| AGAP010194-PA [Anopheles gambiae str. PEST]
Length = 505
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 89/175 (50%), Gaps = 4/175 (2%)
Query: 5 LASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDP 64
L SI T D +C F+ K GACRHG RC H P +S +L+ N + P +
Sbjct: 153 LQSIQHTRADAEDCKFFLKTGACRHGYRCGGNHPTPGVSQVILIPNFFSHPALEQAVHAE 212
Query: 65 QGQ----ALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
G D +++ + +F+ D+ +E +G + + +C N H+ G+VY+++
Sbjct: 213 YGHDARLEFDEDDLKNSYNEFFRDIIQEFEMFGTVRHIFVCRNSVAHLRGSVYIEYESMR 272
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKK 175
+AA A +NGRFYA + + V+F + A C E N C +G CNF+H+ K
Sbjct: 273 NAAAAYLRMNGRFYAKKQLHVEFRNTLTWPTAVCGLNEMNRCQKGAGCNFLHILK 327
>gi|350422847|ref|XP_003493303.1| PREDICTED: hypothetical protein LOC100742355 [Bombus impatiens]
Length = 638
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 93/173 (53%), Gaps = 6/173 (3%)
Query: 3 EHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGV 62
E L + ++ + CPF+ K GACR+GD CSR H + +S +L+ Y +
Sbjct: 171 EALREVIDSQPGKELCPFFTKTGACRYGDTCSRNHRRVCLSKVILVPGFYTHFSLEKNSA 230
Query: 63 DPQ---GQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREE 119
+ + + + HF +FY+D+ EL +G+I++L C N H+ GN+YV++ E
Sbjct: 231 EYDTDIALEFESSETRQHFREFYKDVVPELESFGKIKTLKYCCNTEVHLRGNLYVEYYTE 290
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMH 172
AA ALR L GR+YAGR + +F + +R A C + C +G CNF+H
Sbjct: 291 REAARALRRLKGRWYAGRQLNCEFVNLRSWRSAVCGM---SKCPKGRACNFLH 340
>gi|328789326|ref|XP_392139.2| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like [Apis mellifera]
Length = 455
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 93/173 (53%), Gaps = 6/173 (3%)
Query: 3 EHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGV 62
E L + ++ + CPF+ K GACR+GD CSR H + +S +L+ + Y +
Sbjct: 162 EALREVIDSQPGKELCPFFTKTGACRYGDTCSRNHRRVCLSKVILVPSFYTHFSLEKNCA 221
Query: 63 DPQ---GQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREE 119
+ + + + HF +FY+D+ EL +G I++L C N H+ GN+YV++ E
Sbjct: 222 EYDTDIALEFESSETRQHFREFYKDVVPELESFGRIKTLKYCCNTEVHLRGNLYVEYYTE 281
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMH 172
AA ALR L GR+YAGR + +F + +R A C + C +G CNF+H
Sbjct: 282 REAARALRRLKGRWYAGRQLNCEFVNLKSWRSAVCGM---SKCPKGRACNFLH 331
>gi|380019200|ref|XP_003693502.1| PREDICTED: LOW QUALITY PROTEIN: U2 small nuclear ribonucleoprotein
auxiliary factor 35 kDa subunit-related protein 1-like
[Apis florea]
Length = 459
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 93/173 (53%), Gaps = 6/173 (3%)
Query: 3 EHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGV 62
E L + ++ + CPF+ K GACR+GD CSR H + +S +L+ + Y +
Sbjct: 162 EALREVIDSQPGKELCPFFTKTGACRYGDTCSRNHRRVCLSKVILVPSFYTHFSLEKNCA 221
Query: 63 DPQ---GQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREE 119
+ + + + HF +FY+D+ EL +G I++L C N H+ GN+YV++ E
Sbjct: 222 EYDTDIALEFESSETRQHFREFYKDVVPELESFGRIKTLKYCCNTEVHLRGNLYVEYYTE 281
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMH 172
AA ALR L GR+YAGR + +F + +R A C + C +G CNF+H
Sbjct: 282 REAARALRRLKGRWYAGRQLNCEFVNLKSWRSAVCGM---SKCPKGRACNFLH 331
>gi|340715501|ref|XP_003396250.1| PREDICTED: hypothetical protein LOC100645560 [Bombus terrestris]
Length = 629
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 92/173 (53%), Gaps = 6/173 (3%)
Query: 3 EHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGV 62
E L + ++ + CPF+ K GACR+GD CSR H + +S +L+ Y +
Sbjct: 162 EALREVIDSQPGKELCPFFTKTGACRYGDTCSRNHRRVCLSKVILVPGFYTHFSLEKNSA 221
Query: 63 DPQ---GQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREE 119
+ + + + HF +FY+D+ EL +G I++L C N H+ GN+YV++ E
Sbjct: 222 EYDTDIALEFESSETRQHFREFYKDVVPELESFGRIKTLKYCCNTEVHLRGNLYVEYYTE 281
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMH 172
AA ALR L GR+YAGR + +F + +R A C + C +G CNF+H
Sbjct: 282 REAARALRRLKGRWYAGRQLNCEFVNLRSWRSAVCGM---SKCPKGRACNFLH 331
>gi|390478473|ref|XP_003735517.1| PREDICTED: LOW QUALITY PROTEIN: U2 small nuclear ribonucleoprotein
auxiliary factor 35 kDa subunit-related protein 1-like
[Callithrix jacchus]
Length = 458
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/266 (33%), Positives = 123/266 (46%), Gaps = 31/266 (11%)
Query: 12 EKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGV--------D 63
EKD NCPF K GACR GD CSR H P+ SPTLL+ M+ I G+ D
Sbjct: 164 EKDGANCPFXSKTGACRFGDGCSRKHNFPTSSPTLLIETMF-----IMFGMEQCRRNDYD 218
Query: 64 PQGQALDPRK-IQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHA 122
P D ++ F DFYED+ E G + L + NL H+ GN+YV ++ E
Sbjct: 219 PDAILEDSKEETYPQFLDFYEDVLPEFKNVGRVIQLRVSCNLKPHLRGNIYVHYQLEAEX 278
Query: 123 ANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFM--------HLK 174
AL N R+Y G + +F PV ++ A C +E+ G +CNF+
Sbjct: 279 QAALSLFNKRWYTGPHLQCEFCPVIRWKMAICSSFEKQQHPTGKHCNFLPVFRNPISEFW 338
Query: 175 KISRELRRRL------FGRSRRRRSRSRSRSRSPHKYRGGYE-ERSHGGGRGSGRRDDDR 227
+++R++ L FG++ RR R +K G E +RS G+ S +
Sbjct: 339 EVNRDICLSLNRTASSFGKNSXRRERMGHHDEYSYKRNGESERKRSSHXGKKSHKHTSVS 398
Query: 228 DHRLHGRGRRPRSRSPGR-RGGRSRS 252
R HG R R+R R RG S+S
Sbjct: 399 QER-HGSXSRGRNRHHSRGRGSWSQS 423
>gi|442752923|gb|JAA68621.1| Putative u2 snrnp splicing factor small subunit [Ixodes ricinus]
Length = 116
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 53/90 (58%), Positives = 67/90 (74%), Gaps = 1/90 (1%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSR+H KP+ S T+LL N+Y P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYHNPQNSAQ 60
Query: 61 GVDPQGQA-LDPRKIQDHFEDFYEDLFEEL 89
D A + ++Q+HF++F+ED+F EL
Sbjct: 61 TADGSHLANMTEEEMQEHFDNFFEDVFVEL 90
>gi|85014399|ref|XP_955695.1| U2 small nuclear RNA auxillary factor [Encephalitozoon cuniculi
GB-M1]
gi|19171389|emb|CAD27114.1| U2 snRNP AUXILIARY FACTOR SMALL SUBUNIT (SPLICING FACTOR U2AF)
[Encephalitozoon cuniculi GB-M1]
Length = 254
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 89/173 (51%), Gaps = 7/173 (4%)
Query: 15 RVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKI 74
R C FY K CR+G C+++H P+ S +++ MY + P DP+ L +
Sbjct: 5 REACLFYSKTNGCRYGHECTKVHRIPTRSRVVVVKAMY-----LYPKNDPE-STLGEESV 58
Query: 75 QDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRF 133
Q H + FYED F ELS KYG I L I N ++GN+Y++F EEE A + R+
Sbjct: 59 QIHLDLFYEDWFTELSVKYGAIRKLVIASNSCIQILGNIYIEFHEEEAAMRCAEEIGRRY 118
Query: 134 YAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFG 186
Y G+ I+ + + TC ++E +C +G C F+H ++SR L L
Sbjct: 119 YGGKRIVAELGNCYRTDDGTCTEHERGLCGKGEKCGFIHAARVSRSLVEELLA 171
>gi|449330260|gb|AGE96520.1| u2 snrnp auxiliary factor small subunit [Encephalitozoon cuniculi]
Length = 254
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 89/173 (51%), Gaps = 7/173 (4%)
Query: 15 RVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKI 74
R C FY K CR+G C+++H P+ S +++ MY + P DP+ L +
Sbjct: 5 REACLFYSKTNGCRYGHECTKVHRIPTRSRVVVVKAMY-----LYPKNDPE-STLGEESV 58
Query: 75 QDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRF 133
Q H + FYED F ELS KYG I L I N ++GN+Y++F EEE A + R+
Sbjct: 59 QIHLDLFYEDWFTELSVKYGAIRKLVIASNSCIQILGNIYIEFHEEEAAMRCAEEIGRRY 118
Query: 134 YAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFG 186
Y G+ I+ + + TC ++E +C +G C F+H ++SR L L
Sbjct: 119 YGGKRIVAELGNCYRTDDGTCTEHERGLCGKGEKCGFIHAARVSRSLVEELLA 171
>gi|270006539|gb|EFA02987.1| hypothetical protein TcasGA2_TC010403 [Tribolium castaneum]
Length = 347
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 86/173 (49%), Gaps = 2/173 (1%)
Query: 3 EHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDM--ITP 60
EHL ++ CPF+ K ACR D CSR H KP +S LL+ N Y +
Sbjct: 153 EHLKVSVEMNPNKPVCPFFQKTSACRFRDSCSRNHIKPGVSRILLIPNFYSHYSLEQTEN 212
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
D + + HF+DF+ D+ E+ ++G I +C N H+ GNVYV++
Sbjct: 213 EYDDSSLEFENHETYSHFKDFFFDVLPEMERFGRIRQFKVCCNRESHLRGNVYVEYSTTR 272
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL 173
A + + NGR+Y GR + V+F + ++ A C + C +G CNF+H+
Sbjct: 273 EAVKSFQVFNGRWYGGRQLSVEFCNIESWKSAICGLHSRKKCPKGSSCNFLHV 325
>gi|328352397|emb|CCA38796.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2 , RNA-binding motif and
serine/arginine rich protein 2 [Komagataella pastoris
CBS 7435]
Length = 243
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/221 (33%), Positives = 105/221 (47%), Gaps = 50/221 (22%)
Query: 15 RVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDM--------ITPGVDPQG 66
RV FY +IGACRHG++C + H P+ S ++L N + + + D Q
Sbjct: 12 RVCSAFYRRIGACRHGNKCVKEHIHPTSSYCVVLRNFFDFSLLKVANEGTEVADEGDKQK 71
Query: 67 QAL-----------------------------------DP----RKIQDH--FEDFYEDL 85
Q L DP ++I + F +D+
Sbjct: 72 QQLSGDKKNEQNNGTEKVNQDTSTKDSTSPQNSEPERNDPYTKLKEISESERFNKLLQDI 131
Query: 86 FEELS-KYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVDFS 144
F ELS YG IE + IC+N H+ GNVY++F +E AAN + LN R+Y GRPI + S
Sbjct: 132 FVELSLNYGFIEDIVICENNNVHLKGNVYIKFSTKESAANCNQELNNRWYNGRPIYSELS 191
Query: 145 PVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLF 185
PV F EATCR+++ C RG CN+MH+K+ + LF
Sbjct: 192 PVRSFEEATCRKHDFGRCERGDMCNYMHIKRAPPTVTNNLF 232
>gi|332026662|gb|EGI66771.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 1 [Acromyrmex echinatior]
Length = 478
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 107/214 (50%), Gaps = 11/214 (5%)
Query: 3 EHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDM---IT 59
E L I + + CPF+ K G CR+G+ CS+ H K +S +L+ Y + +
Sbjct: 162 EVLREIVDNQPTKELCPFFSKTGVCRYGNACSKNHRKFFLSRVILIPGFYSHFSLEKNLA 221
Query: 60 PGVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREE 119
+ + HF +FYED+ EL +G I++L C N H+ GNVYV++ E
Sbjct: 222 EYDTDVALEFERSETLHHFYEFYEDVITELESFGRIKTLKCCCNKEIHLRGNVYVEYYTE 281
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGG-YCNFMHLKKISR 178
AA A RNL GR+YAG+ + +F T +R A C N C +G +CNF+H R
Sbjct: 282 REAARAWRNLKGRWYAGKQLNCEFVNFTSWRGAVCGI---NKCPKGSKFCNFLH---TFR 335
Query: 179 ELRRRLFGRS-RRRRSRSRSRSRSPHKYRGGYEE 211
+ +S RR ++ S RS H+ + +EE
Sbjct: 336 NPHNKYDIKSPRREKNNSNDSKRSEHRSKSKWEE 369
>gi|4914334|gb|AAD32882.1|AC005489_20 F14N23.20 [Arabidopsis thaliana]
Length = 836
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 103/214 (48%), Gaps = 52/214 (24%)
Query: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRP----------DMIT- 59
E D+ +CPF+ K GACR G RCSR+H P+ S TLL+ NMY P +++T
Sbjct: 267 IEMDKAHCPFHLKTGACRFGQRCSRVHFYPNKSCTLLMKNMYNGPGITWEQDEGLELLTL 326
Query: 60 ---PGVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNIC--------------- 101
+ P + + +E+FYED+ E KYGE+ + +C
Sbjct: 327 IYSLSLFPPSLQYTDEEAELCYEEFYEDVHTEFLKYGELVNFKVCRFSSAPSPPFPSFPL 386
Query: 102 --------------------DNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIV 141
N + H+ GNVYV +R E A A +++NGR++AG+ +
Sbjct: 387 PPLFFLLSIISHRFILYQIRINGSFHLKGNVYVHYRSLESAILAYQSINGRYFAGKQVNC 446
Query: 142 DFSPVTDFREATCRQYEEN---VCNRGGYCNFMH 172
+F ++ ++ A C +Y ++ C+RG CNF+H
Sbjct: 447 EFVNISRWKVAICGEYMKSRLKTCSRGSACNFIH 480
>gi|157128201|ref|XP_001655088.1| U2 snrnp auxiliary factor, small subunit [Aedes aegypti]
gi|108872656|gb|EAT36881.1| AAEL011071-PA [Aedes aegypti]
Length = 509
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 87/165 (52%), Gaps = 6/165 (3%)
Query: 14 DRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDM-----ITPGVDPQGQA 68
DR C F+ K+GACR G RCS H P +S LLL N + P + G+D +
Sbjct: 185 DRNPCVFFGKVGACRFGVRCSSDHAIPGLSELLLLPNFFAHPALDHQQHPEYGLDSSIE- 243
Query: 69 LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRN 128
D ++ + +F+ D+ EE +G I + N H+ GNVYVQ+ + AA A +
Sbjct: 244 FDDDELYRSYTEFFMDVIEEFESFGPISGFFVTRNFEPHLRGNVYVQYEKVRDAAKAYQR 303
Query: 129 LNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL 173
+NGRFYA + + V+F + A C +E + C +G CN++HL
Sbjct: 304 MNGRFYASKQLRVEFRAPIVWTAAVCGLFERSRCQKGKSCNYLHL 348
>gi|380804095|gb|AFE73923.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2, partial [Macaca mulatta]
Length = 261
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 79/146 (54%), Gaps = 4/146 (2%)
Query: 32 RCSRLHTKPSISPTLLLSNMYQRPDMITP---GVDPQGQA-LDPRKIQDHFEDFYEDLFE 87
RCSR H P+ SPTLL+ +M+ M DP +I F DFYED+
Sbjct: 1 RCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASLEYSEEEIYQQFLDFYEDVLP 60
Query: 88 ELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVDFSPVT 147
E G++ + NL H+ GNVYVQ++ EE AL NGR+YAGR + +F PVT
Sbjct: 61 EFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVT 120
Query: 148 DFREATCRQYEENVCNRGGYCNFMHL 173
++ A C +E C RG +CNF+H+
Sbjct: 121 RWKMAICGLFEIQQCPRGKHCNFLHV 146
>gi|302757309|ref|XP_002962078.1| hypothetical protein SELMODRAFT_77053 [Selaginella moellendorffii]
gi|300170737|gb|EFJ37338.1| hypothetical protein SELMODRAFT_77053 [Selaginella moellendorffii]
Length = 132
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 79/132 (59%), Gaps = 2/132 (1%)
Query: 13 KDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPR 72
+D+ +CPF+ K GACR G RCSRLH P S TLL+ NMY P + +G
Sbjct: 2 QDKTHCPFHTKTGACRFGPRCSRLHVYPEKSCTLLIKNMYTGPGLAWE--HDEGLECTDE 59
Query: 73 KIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGR 132
+I+ FE+FYED+ E K+GE+ + +C N + H+ GNVYV ++ E A A L+GR
Sbjct: 60 EIEQKFEEFYEDVHSEFLKFGELVNFKVCRNSSPHLRGNVYVHYQSEADAVAACLALSGR 119
Query: 133 FYAGRPIIVDFS 144
FYA + ++ +S
Sbjct: 120 FYASKQVLARYS 131
>gi|254567930|ref|XP_002491075.1| hypothetical protein [Komagataella pastoris GS115]
gi|238030872|emb|CAY68795.1| Hypothetical protein PAS_chr2-1_0187 [Komagataella pastoris GS115]
Length = 239
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 103/216 (47%), Gaps = 50/216 (23%)
Query: 20 FYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDM--------ITPGVDPQGQAL-- 69
FY +IGACRHG++C + H P+ S ++L N + + + D Q Q L
Sbjct: 13 FYRRIGACRHGNKCVKEHIHPTSSYCVVLRNFFDFSLLKVANEGTEVADEGDKQKQQLSG 72
Query: 70 ---------------------------------DP----RKIQDH--FEDFYEDLFEELS 90
DP ++I + F +D+F ELS
Sbjct: 73 DKKNEQNNGTEKVNQDTSTKDSTSPQNSEPERNDPYTKLKEISESERFNKLLQDIFVELS 132
Query: 91 -KYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVDFSPVTDF 149
YG IE + IC+N H+ GNVY++F +E AAN + LN R+Y GRPI + SPV F
Sbjct: 133 LNYGFIEDIVICENNNVHLKGNVYIKFSTKESAANCNQELNNRWYNGRPIYSELSPVRSF 192
Query: 150 REATCRQYEENVCNRGGYCNFMHLKKISRELRRRLF 185
EATCR+++ C RG CN+MH+K+ + LF
Sbjct: 193 EEATCRKHDFGRCERGDMCNYMHIKRAPPTVTNNLF 228
>gi|213688747|gb|ACJ53923.1| U2 small nuclear RNA auxiliary factor 1 [Bubalus bubalis]
Length = 110
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 78/110 (70%), Gaps = 1/110 (0%)
Query: 46 LLLSNMYQRPDMITPGVDPQGQALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNICDNL 104
+ L N+Y+ P + D A+ ++Q+H+++F+E++F E+ KYGE+E +N+CDNL
Sbjct: 1 IALLNIYRNPQNSSQSADGLRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNL 60
Query: 105 ADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATC 154
DH+VGNVYV+FR EE A A+ +LN R++ G+PI + SPVTDFREA C
Sbjct: 61 GDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACC 110
>gi|403255704|ref|XP_003920552.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like [Saimiri boliviensis
boliviensis]
Length = 464
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 79/148 (53%), Gaps = 4/148 (2%)
Query: 30 GDRCSRLHTKPSISPTLLLSNMYQRPDMIT---PGVDPQGQA-LDPRKIQDHFEDFYEDL 85
G +CSR H P+ SPTLL+ +M+ M DP + F DFYED+
Sbjct: 174 GLKCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASLEYSEEETYQQFLDFYEDV 233
Query: 86 FEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVDFSP 145
E G++ + NL H+ GNVYVQ++ EE AL NGR+YAGR + +F P
Sbjct: 234 LPEFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCP 293
Query: 146 VTDFREATCRQYEENVCNRGGYCNFMHL 173
VT ++ A C +E C RG +CNF+H+
Sbjct: 294 VTRWKMAICGLFEIQQCPRGKHCNFLHV 321
>gi|380804933|gb|AFE74342.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2, partial [Macaca mulatta]
Length = 261
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 78/146 (53%), Gaps = 4/146 (2%)
Query: 32 RCSRLHTKPSISPTLLLSNMYQRPDMITP---GVDPQGQA-LDPRKIQDHFEDFYEDLFE 87
RCSR H P+ SPTLL+ +M+ M DP + F DFYED+
Sbjct: 1 RCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASLEYSEEETYQQFLDFYEDVLP 60
Query: 88 ELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVDFSPVT 147
E G++ + NL H+ GNVYVQ++ EE AL NGR+YAGR + +F PVT
Sbjct: 61 EFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVT 120
Query: 148 DFREATCRQYEENVCNRGGYCNFMHL 173
++ A C +E C RG +CNF+H+
Sbjct: 121 RWKMAICGLFEIQQCPRGKHCNFLHV 146
>gi|344244411|gb|EGW00515.1| Splicing factor U2AF 35 kDa subunit [Cricetulus griseus]
Length = 98
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 48/89 (53%), Positives = 67/89 (75%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC YFKIGACRHGDRCSRLH KP+ S T+ L N+Y+ P +
Sbjct: 1 MAEYLASIFGTEKDKVNCSLYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQ 60
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEEL 89
D A+ ++++H+++F+E++F E+
Sbjct: 61 YADSLHCAVSDVEMKEHYDEFFEEVFTEM 89
>gi|167384024|ref|XP_001736783.1| splicing factor U2Af 38 kDa subunit [Entamoeba dispar SAW760]
gi|165900719|gb|EDR26968.1| splicing factor U2Af 38 kDa subunit, putative [Entamoeba dispar
SAW760]
Length = 251
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 91/163 (55%), Gaps = 12/163 (7%)
Query: 18 CPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKIQDH 77
C F+ K+G+CRHGD C ++H P S T+LL P V P Q + P+ Q+
Sbjct: 7 CEFFSKVGSCRHGDICEKVHIIPQSSVTILL-----------PHVWPAQQVITPQD-QEQ 54
Query: 78 FEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGR 137
+E F+ DL+ S +G++ + + +N A H+ GNV V+F E AA A+++L G+ ++
Sbjct: 55 YEHFFFDLYTLCSGFGQVVDMIVSENQAPHLKGNVLVKFATEAMAAEAVKHLQGQLFSSV 114
Query: 138 PIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
+ + + D +E+ C+Q++ VC + CN++H+ I +
Sbjct: 115 VLNPSYVGIIDLKESRCKQHDMGVCPKHSGCNYLHVLPIPNQF 157
>gi|258575975|ref|XP_002542169.1| splicing factor U2AF 23 kDa subunit [Uncinocarpus reesii 1704]
gi|237902435|gb|EEP76836.1| splicing factor U2AF 23 kDa subunit [Uncinocarpus reesii 1704]
Length = 139
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 84/149 (56%), Gaps = 27/149 (18%)
Query: 60 PGVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREE 119
P DP+ + ++P ++Q+HF+ FYEDL+ +++GNVY +F+ E
Sbjct: 5 PAFDPKNK-MNPSQLQNHFDAFYEDLW--------------------YLIGNVYARFKYE 43
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRE 179
+ A A LN R+YA RPI + SPVTDFREA CR C RGG+CNF+H K+ S E
Sbjct: 44 DSAQKACDALNSRWYAARPIYCELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKEPSAE 103
Query: 180 LRRRL------FGRSRRRRSRSRSRSRSP 202
L R L + + R R RS SRS SP
Sbjct: 104 LERDLELSTKKWLKMRGRDERSASRSPSP 132
>gi|426395277|ref|XP_004063901.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like [Gorilla gorilla
gorilla]
Length = 295
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 77/145 (53%), Gaps = 4/145 (2%)
Query: 33 CSRLHTKPSISPTLLLSNMYQRPDMITP---GVDPQGQA-LDPRKIQDHFEDFYEDLFEE 88
CSR H P+ SPTLL+ +M+ M DP + F DFYED+ E
Sbjct: 4 CSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASLEYSEEETYQQFLDFYEDVLPE 63
Query: 89 LSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVDFSPVTD 148
G++ + NL H+ GNVYVQ++ EE AL NGR+YAGR + +F PVT
Sbjct: 64 FKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVTR 123
Query: 149 FREATCRQYEENVCNRGGYCNFMHL 173
++ A C +E C RG +CNF+H+
Sbjct: 124 WKMAICGLFEIQQCPRGKHCNFLHV 148
>gi|380804633|gb|AFE74192.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2, partial [Macaca mulatta]
Length = 199
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 78/146 (53%), Gaps = 4/146 (2%)
Query: 32 RCSRLHTKPSISPTLLLSNMYQRPDMITP---GVDPQGQA-LDPRKIQDHFEDFYEDLFE 87
RCSR H P+ SPTLL+ +M+ M DP + F DFYED+
Sbjct: 1 RCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDASLEYSEEETYQQFLDFYEDVLP 60
Query: 88 ELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVDFSPVT 147
E G++ + NL H+ GNVYVQ++ EE AL NGR+YAGR + +F PVT
Sbjct: 61 EFKNVGKVIQFKVSCNLEPHLRGNVYVQYQSEEECQAALSLFNGRWYAGRQLQCEFCPVT 120
Query: 148 DFREATCRQYEENVCNRGGYCNFMHL 173
++ A C +E C RG +CNF+H+
Sbjct: 121 RWKMAICGLFEIQQCPRGKHCNFLHV 146
>gi|241948859|ref|XP_002417152.1| spliceosomal factor U2AF small subunit, putative [Candida
dubliniensis CD36]
gi|223640490|emb|CAX44743.1| spliceosomal factor U2AF small subunit, putative [Candida
dubliniensis CD36]
Length = 374
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 72/114 (63%), Gaps = 1/114 (0%)
Query: 73 KIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGR 132
+ Q F+ F++D+F +SK+G+I + +C+N +H+ GNVYV F E A NA LN
Sbjct: 209 QTQHDFDQFFQDIFVHISKFGQISDIAVCENENNHLAGNVYVMFESPEDAYNANLQLNQE 268
Query: 133 FYAGRPIIVDFSPVTDFREATCRQYE-ENVCNRGGYCNFMHLKKISRELRRRLF 185
+Y GRP+ + SPV+DF EA C Y + C RG CN+MH++ SR+L + L+
Sbjct: 269 WYNGRPVYSELSPVSDFNEACCEAYSYYHNCERGAMCNYMHIRLPSRDLEQSLY 322
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 31/42 (73%)
Query: 16 VNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDM 57
V C FY +IGACRHG+ CS+ H KP S T+LL+N+YQ P +
Sbjct: 20 VLCSFYSRIGACRHGENCSKKHLKPISSRTILLANLYQNPKL 61
>gi|189237330|ref|XP_973215.2| PREDICTED: similar to U2 small nuclear ribonucleoprotein auxiliary
factor (U2AF) 1, related sequence 2 [Tribolium
castaneum]
Length = 337
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 83/173 (47%), Gaps = 12/173 (6%)
Query: 3 EHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDM--ITP 60
EHL ++ CPF+ K ACR D CSR H KP +S LL+ N Y +
Sbjct: 153 EHLKVSVEMNPNKPVCPFFQKTSACRFRDSCSRNHIKPGVSRILLIPNFYSHYSLEQTEN 212
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
D + + HF+DF+ D+ E+ ++G I +C N H+ GNVYV++
Sbjct: 213 EYDDSSLEFENHETYSHFKDFFFDVLPEMERFGRIRQFKVCCNRESHLRGNVYVEYSTTR 272
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL 173
A + + NGR+Y GR + V+F + ++ A C G CNF+H+
Sbjct: 273 EAVKSFQVFNGRWYGGRQLSVEFCNIESWKSAIC----------GSSCNFLHV 315
>gi|168061106|ref|XP_001782532.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666017|gb|EDQ52684.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 158
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 88/161 (54%), Gaps = 4/161 (2%)
Query: 13 KDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPR 72
+D+ NCPFY K G CR G RCSRLH + + TLL+ +MY + V+
Sbjct: 1 QDKRNCPFYIKTGVCRFGVRCSRLHPVFNEACTLLMRSMYTGAGLALEQVE--SLEYTDE 58
Query: 73 KIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGR 132
++ +E+FY+D+ E ++GE+ + +C N + H+ GNVYV + +E A A ++NGR
Sbjct: 59 EVAQEYEEFYDDVHSEFIQFGELVNFKVCRNGSPHLRGNVYVHYASQESAMLAYNHMNGR 118
Query: 133 FYAGRPIIVD-FSPVTDFREATCRQYEENVCNRGGYCNFMH 172
FYA + +++ + D A C C+ G CNFMH
Sbjct: 119 FYAKKQVVLPRGWKICDIL-ACCFWSTVQTCSHGSACNFMH 158
>gi|42572579|ref|NP_974385.1| Zinc finger C-x8-C-x5-C-x3-H type family protein [Arabidopsis
thaliana]
gi|332644432|gb|AEE77953.1| Zinc finger C-x8-C-x5-C-x3-H type family protein [Arabidopsis
thaliana]
Length = 75
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 53/74 (71%), Positives = 61/74 (82%), Gaps = 2/74 (2%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
M EHLASI+GTEKDRVNCPFYFKIG CR+GDRCSRL+TKPSISPTLLLSN YQ+ +
Sbjct: 1 MVEHLASIYGTEKDRVNCPFYFKIGVCRNGDRCSRLYTKPSISPTLLLSNTYQQ-GRLKQ 59
Query: 61 GVDP-QGQALDPRK 73
+DP Q + DP+K
Sbjct: 60 FLDPVQSREKDPKK 73
>gi|2833358|sp|Q29350.3|U2AF1_PIG RecName: Full=Splicing factor U2AF 35 kDa subunit; AltName:
Full=U2 auxiliary factor 35 kDa subunit; AltName:
Full=U2 snRNP auxiliary factor small subunit
Length = 82
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 46/82 (56%), Positives = 61/82 (74%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLH KP+ S T++L N+Y+ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIVLLNLYRNPQNTAQ 60
Query: 61 GVDPQGQALDPRKIQDHFEDFY 82
D + ++Q+H+++F+
Sbjct: 61 TADGSHCHVSDVEVQEHYDNFF 82
>gi|322795207|gb|EFZ18029.1| hypothetical protein SINV_09275 [Solenopsis invicta]
Length = 470
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 89/177 (50%), Gaps = 7/177 (3%)
Query: 3 EHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGV 62
E L I + + CPF+ K G CR+G+ CS+ H K +S +L+ Y +
Sbjct: 154 EALRRIVDNQPSKEPCPFFTKTGVCRYGNACSKNHRKVFLSNVILIPGFYSHFSLQQHAE 213
Query: 63 DPQGQA---LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREE 119
+ + + HF +F+ED+ EL +G I+ + C N+ H+ GN+YV++ E
Sbjct: 214 EYDTDVALEFENSETWQHFYEFFEDVITELESFGRIKVIKCCRNMEVHLRGNLYVEYYTE 273
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGG-YCNFMHLKK 175
AA A RNL GR+Y G+ + +F + + A C + C +G YCNF+H K
Sbjct: 274 REAARAWRNLKGRWYGGKRLHCEFVNLISWGGAICGIAQ---CPKGTKYCNFLHTFK 327
>gi|357617275|gb|EHJ70693.1| hypothetical protein KGM_02050 [Danaus plexippus]
Length = 392
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 116/248 (46%), Gaps = 14/248 (5%)
Query: 3 EHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMY-----QRPDM 57
+ L +++ + + CPFY K CR GD CSR H P IS LL N++ + +
Sbjct: 146 QELLTLYESRPNCDPCPFYAKTACCRFGDECSRNHKYPGISKILLAPNLFGHFGLENSNF 205
Query: 58 ITPGVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFR 117
D + D +D F++F+ D+ E K+G++ + +C+N H+ GN Y+++
Sbjct: 206 NEYDTDIMLEYEDSDTYKD-FKEFFFDILPEFQKFGQVVEIKVCNNFEKHLRGNTYIEYS 264
Query: 118 EEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIS 177
+ A +A R L+ R+Y G+ + + F + + A C C +G CNF+H+ K
Sbjct: 265 DVRSAVSAYRALHTRWYGGKQLSLQFCRLLSWSSAICGLQVTGRCPKGRACNFLHVFKNP 324
Query: 178 RELRRRLFGRSRRRRSRSRSRSRSPHKYRGGYEERSHGGGRGSGRRDDDRD---HRLHGR 234
+L +R S+ + + S ER R S R+DD R H +
Sbjct: 325 IDLHIAY----EKRYSKRQQHTSSRSWRWSESPERESPTSR-SKRKDDGHSKSRERRHYQ 379
Query: 235 GRRPRSRS 242
R PRSRS
Sbjct: 380 HRSPRSRS 387
>gi|67476636|ref|XP_653880.1| U2 snRNP auxiliary factor [Entamoeba histolytica HM-1:IMSS]
gi|56470879|gb|EAL48494.1| U2 snRNP auxiliary factor, putative [Entamoeba histolytica
HM-1:IMSS]
gi|407039409|gb|EKE39628.1| U2 snRNP auxiliary factor small subunit, putative [Entamoeba
nuttalli P19]
gi|449708002|gb|EMD47542.1| U2 snRNP auxiliary factor, putative [Entamoeba histolytica KU27]
Length = 251
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 89/163 (54%), Gaps = 12/163 (7%)
Query: 18 CPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKIQDH 77
C F+ K+G+CRHG+ C ++H P S T+LL P V P Q + P+ Q+
Sbjct: 7 CEFFSKVGSCRHGNICEKVHITPHSSVTILL-----------PHVWPAQQVITPQD-QEQ 54
Query: 78 FEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGR 137
+E F+ DL+ S +G++ + + +N A H+ GNV V+F E A A+++L G+ +
Sbjct: 55 YEHFFFDLYTLCSGFGKVVDMIVSENQASHLKGNVLVKFATEAMAEEAIKHLQGQLFGSV 114
Query: 138 PIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
+ + + D +E+ C+Q++ VC + CN++H+ I +
Sbjct: 115 VLNPSYVGIIDLKESRCKQHDMGVCPKHSGCNYLHVLPIPNQF 157
>gi|254576833|ref|XP_002494403.1| ZYRO0A00638p [Zygosaccharomyces rouxii]
gi|238937292|emb|CAR25470.1| ZYRO0A00638p [Zygosaccharomyces rouxii]
Length = 137
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 80/141 (56%), Gaps = 11/141 (7%)
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
G+DPQ F+ YED++ E ++G + S+ IC+N DH+ GNVY+ + E+
Sbjct: 8 GIDPQD-----------FDALYEDIYMEACRFGPVRSMVICENRNDHLKGNVYLYYEREQ 56
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A +A N N R++ RP+ D + V DFREA CR+++ C RGG CNFMH+++ S ++
Sbjct: 57 DAEDAKNNFNTRWFDERPLYCDLTHVADFREAVCRKHDLGTCERGGDCNFMHVRRPSTKI 116
Query: 181 RRRLFGRSRRRRSRSRSRSRS 201
R L + RS+S
Sbjct: 117 RIDLEKSQAKHWQFETKRSKS 137
>gi|307171941|gb|EFN63567.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 1 [Camponotus floridanus]
Length = 507
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 89/174 (51%), Gaps = 7/174 (4%)
Query: 3 EHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGV 62
E L I + + CPF+ K G CR+GD CS+ H + +S +L+ Y +
Sbjct: 160 EALREIIDNQPSKDICPFFTKTGVCRYGDMCSKNHRRVFLSKVILIPGFYTHFSLEKNSA 219
Query: 63 DPQ---GQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREE 119
+ G + + HF FYED+ + L +G+I++L C N H+ GN+YV++ E
Sbjct: 220 EYDTDIGLEFENSETWHHFRKFYEDVIKILELFGKIKTLKCCCNTELHLRGNLYVEYYTE 279
Query: 120 EHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGG-YCNFMH 172
AA A R+L G YA + + +F +T +R+A C + C +G CNF+H
Sbjct: 280 REAARAWRHLKGYTYANKQLNCEFVNLTSWRKAICGMTK---CPKGSKACNFLH 330
>gi|238879030|gb|EEQ42668.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 371
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 69/112 (61%), Gaps = 1/112 (0%)
Query: 75 QDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFY 134
Q F+ F++D+F +SK G+I + +C+N +H+ GNVYV F E A NA LN ++
Sbjct: 208 QKDFDQFFQDIFVHISKLGQIRDIAVCENENNHLAGNVYVMFESAEDAYNANLQLNQEWF 267
Query: 135 AGRPIIVDFSPVTDFREATCRQYEE-NVCNRGGYCNFMHLKKISRELRRRLF 185
G+P+ D SPV DF +A C +Y + + C RG CN+MH++ S ++ L+
Sbjct: 268 NGKPVYSDLSPVNDFNDACCEEYRDYHDCQRGAMCNYMHVRLPSSDIEESLY 319
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 32/42 (76%)
Query: 16 VNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDM 57
V C FY KIGACRHG++CS+ H KP S T+LL+N+YQ P +
Sbjct: 20 VLCSFYSKIGACRHGEKCSKKHLKPISSRTILLANLYQNPTL 61
>gi|68490905|ref|XP_710740.1| potential spliceosomal U2AF small subunit [Candida albicans SC5314]
gi|68490926|ref|XP_710731.1| potential spliceosomal U2AF small subunit [Candida albicans SC5314]
gi|46431969|gb|EAK91483.1| potential spliceosomal U2AF small subunit [Candida albicans SC5314]
gi|46431979|gb|EAK91492.1| potential spliceosomal U2AF small subunit [Candida albicans SC5314]
Length = 371
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 69/112 (61%), Gaps = 1/112 (0%)
Query: 75 QDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFY 134
Q F+ F++D+F +SK G+I + +C+N +H+ GNVYV F E A NA LN ++
Sbjct: 208 QKDFDQFFQDIFVHISKLGQIRDIAVCENENNHLAGNVYVMFESAEDAYNANLQLNQEWF 267
Query: 135 AGRPIIVDFSPVTDFREATCRQYEE-NVCNRGGYCNFMHLKKISRELRRRLF 185
G+P+ D SPV DF +A C +Y + + C RG CN+MH++ S ++ L+
Sbjct: 268 NGKPVYSDLSPVNDFNDACCEEYRDYHDCQRGAMCNYMHVRLPSSDIEESLY 319
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 32/42 (76%)
Query: 16 VNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDM 57
V C FY KIGACRHG++CS+ H KP S T+LL+N+YQ P +
Sbjct: 20 VLCSFYSKIGACRHGEKCSKKHLKPISSRTILLANLYQNPTL 61
>gi|123433241|ref|XP_001308579.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121890266|gb|EAX95649.1| hypothetical protein TVAG_045370 [Trichomonas vaginalis G3]
Length = 206
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 89/178 (50%), Gaps = 3/178 (1%)
Query: 13 KDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPR 72
++++ C + K G C G+ C++ H +S LL ++Y PD+ + +
Sbjct: 3 EEKLFCLQFEKTGVCLKGEMCNKPHRSDPMSRVLLFKHLYPDPDVFLSLLPAGSVTISDE 62
Query: 73 KIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGR 132
+ Q + FY D+F ++G +E + I N D M GNVYV F+E + A A NLN +
Sbjct: 63 EKQRAADAFYYDIFLMCQRFGPVEDILIASNKTDIMNGNVYVSFKEVDAAQAAFLNLNNQ 122
Query: 133 FYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRR 190
+YAGR + +P++ A C E C G CN++H KIS + + F RS R
Sbjct: 123 YYAGRKVECVLTPISRLSNAICN---ETSCPYGSTCNYVHPLKISEHITKICFPRSSR 177
>gi|123455079|ref|XP_001315287.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121897959|gb|EAY03064.1| hypothetical protein TVAG_171620 [Trichomonas vaginalis G3]
Length = 241
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 90/173 (52%)
Query: 18 CPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKIQDH 77
C + K G C GDRC+++H P+++ T++ +++ PD + + ++ Q +
Sbjct: 13 CSIFEKTGCCPKGDRCNKVHFIPAMARTVIFHHIFPNPDFFIQCLPDGVITMSAQEKQRY 72
Query: 78 FEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGR 137
+ F+ D+F ++G IE L +C N D + GN YV + + + A AL L+G++YAGR
Sbjct: 73 IDAFFLDMFLMCRRFGAIEDLLLCSNTMDCLSGNFYVFYEQSDCARMALTALDGQYYAGR 132
Query: 138 PIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRR 190
+ V V + A C+ + C+RG C F+H + S L + + R +
Sbjct: 133 KVHVTLCSVPRYSTALCKSSMKGECSRGNECAFIHALEPSFALYQEVIPRINK 185
>gi|123437829|ref|XP_001309706.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121891444|gb|EAX96776.1| hypothetical protein TVAG_216790 [Trichomonas vaginalis G3]
Length = 206
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 89/178 (50%), Gaps = 3/178 (1%)
Query: 13 KDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPR 72
++++ C + K G C G+ C++ H +S LL ++Y PD+ + +
Sbjct: 3 EEKLFCLQFEKTGVCLKGEMCNKPHRSDPMSRILLFKHLYPDPDVFLALLPTGSVTISDE 62
Query: 73 KIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGR 132
+ Q + FY D+F ++G +E + I N D M GNVYV F+E + A A LN +
Sbjct: 63 EKQRAADAFYYDIFLMCQRFGPVEDILIASNKTDIMNGNVYVSFKEVDAAQAAFLTLNNQ 122
Query: 133 FYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRR 190
+YAGR + +P++ A C E+ C G CN++H KIS + + F RS R
Sbjct: 123 YYAGRKVECVLTPISRLSNAICN---ESACPYGSTCNYVHPLKISEHITKICFPRSSR 177
>gi|15988329|pdb|1JMT|A Chain A, X-Ray Structure Of A Core U2af65U2AF35 HETERODIMER
Length = 104
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 72/104 (69%), Gaps = 1/104 (0%)
Query: 43 SPTLLLSNMYQRPDMITPGVDPQGQALDPRKIQDHFEDFYEDLFEELS-KYGEIESLNIC 101
S T+ L N+Y+ P + D A+ ++Q+H+++F+E++F E+ KYGE+E +N+C
Sbjct: 1 SQTIALLNIYRNPQNSSQSADGLRSAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVC 60
Query: 102 DNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVDFSP 145
DNL DH+VGNVYV+FR EE A A+ +LN R++ G+PI + SP
Sbjct: 61 DNLGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSP 104
>gi|345315324|ref|XP_001512892.2| PREDICTED: hypothetical protein LOC100082198, partial
[Ornithorhynchus anatinus]
Length = 384
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 45/76 (59%), Positives = 58/76 (76%), Gaps = 1/76 (1%)
Query: 84 DLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVD 142
++F EL KYGEIE +N+CDNL DH+VGNVYV+FR EE A A+ LN R++ G+ + +
Sbjct: 1 EVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAVSELNNRWFNGQAVQAE 60
Query: 143 FSPVTDFREATCRQYE 158
SPVTDFRE+ CRQYE
Sbjct: 61 LSPVTDFRESCCRQYE 76
>gi|241948837|ref|XP_002417141.1| spliceosomal U2AF small subunit, putative [Candida dubliniensis
CD36]
gi|223640479|emb|CAX44731.1| spliceosomal U2AF small subunit, putative [Candida dubliniensis
CD36]
Length = 372
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 77/129 (59%), Gaps = 1/129 (0%)
Query: 68 ALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALR 127
L +I+ F+ FY+D+F ++K G+I + +C+N +H+ G+VYV+F + E A NA
Sbjct: 201 VLTDEQIRKDFDLFYQDIFVHIAKLGQINDMAVCEN-ENHLSGHVYVKFNDYEDAYNANL 259
Query: 128 NLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGR 187
LN +Y GRPI + SPV +A C ++ CNRG CN++H+K+ ++ +++ L+
Sbjct: 260 QLNQEWYNGRPIYSELSPVNSISDAHCSAWDHGHCNRGATCNYLHVKQPTQGMKKSLYDS 319
Query: 188 SRRRRSRSR 196
+ + R
Sbjct: 320 QSKSYTLKR 328
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 32/43 (74%)
Query: 13 KDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRP 55
K V C FY +IGACRHG++C++ H +P+ + T+L+ N+YQ P
Sbjct: 21 KSTVLCSFYTRIGACRHGEKCTKKHLRPTSTKTILIPNLYQNP 63
>gi|149043575|gb|EDL97026.1| rCG60540, isoform CRA_c [Rattus norvegicus]
Length = 85
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/55 (76%), Positives = 49/55 (89%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRP 55
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLH KP+ S T+L+ N+Y+ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRNP 55
>gi|50949477|emb|CAH10401.1| hypothetical protein [Homo sapiens]
Length = 67
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/55 (76%), Positives = 49/55 (89%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRP 55
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLH KP+ S T+L+ N+Y+ P
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRNP 55
>gi|444322338|ref|XP_004181817.1| hypothetical protein TBLA_0G03640 [Tetrapisispora blattae CBS 6284]
gi|387514862|emb|CCH62298.1| hypothetical protein TBLA_0G03640 [Tetrapisispora blattae CBS 6284]
Length = 213
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 90/167 (53%), Gaps = 16/167 (9%)
Query: 18 CPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKIQDH 77
C F+++IGACR+ +C + H +P+ S ++L N+ +D + L+
Sbjct: 57 CFFFYEIGACRYNSKCIKKHIRPTRSNCIVLLNL----------IDLK---LNTEVTNYA 103
Query: 78 FEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGR 137
F+ Y+D+F E K+G+I SL I N D + GNVY+++ + A +A+ N N R+Y R
Sbjct: 104 FDSIYQDIFLEAMKFGKILSLEISVNENDCLNGNVYIKYLNDSIARDAMNNFNTRWYDER 163
Query: 138 PIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRL 184
PI D + ++ E TCR+Y+ C RG C +H + S L+ L
Sbjct: 164 PIYCD---LVNYNEGTCRRYDNGNCARGPECTLLHRRWPSSRLKWDL 207
>gi|303390771|ref|XP_003073616.1| putative U2 small nuclear RNA auxillary factor [Encephalitozoon
intestinalis ATCC 50506]
gi|303302763|gb|ADM12256.1| putative U2 small nuclear RNA auxillary factor [Encephalitozoon
intestinalis ATCC 50506]
Length = 245
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 87/172 (50%), Gaps = 7/172 (4%)
Query: 15 RVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKI 74
R C FY K ACR+G C++ H P +++ MY + P DP+ L I
Sbjct: 5 RDTCLFYSKTNACRYGLECTKAHRIPIRGKVVVVKGMY-----LYPKNDPE-STLSKESI 58
Query: 75 QDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRF 133
Q H + FYED F ELS +YG I L I N + ++GN+Y++F EE+ A + + R+
Sbjct: 59 QIHLDLFYEDWFSELSIRYGSIRRLVIASNSSSQLLGNIYIEFEEEKTALRCVEEIGKRY 118
Query: 134 YAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLF 185
Y+GR I + + C E+ C +G C F+H ++S +L LF
Sbjct: 119 YSGRRIAAELGNCYRIDDGMCTDNEKEKCEKGEKCGFIHSARVSTDLAEELF 170
>gi|195433120|ref|XP_002064563.1| GK23757 [Drosophila willistoni]
gi|194160648|gb|EDW75549.1| GK23757 [Drosophila willistoni]
Length = 589
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 81/156 (51%), Gaps = 11/156 (7%)
Query: 18 CPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKIQDH 77
C F+ + CR G CS H +P ++ LL+ + + P + D + L ++D
Sbjct: 173 CEFFTRTNCCRFGHTCSHNHRRPMLAKILLIRHFFSHPLLKLTSSDDYLE-LTEHDLRDS 231
Query: 78 FEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGR 137
+++F+ D EL K+G+I + N D++ G+V+V++ +E HA A NL GR+YA R
Sbjct: 232 YDEFFHDAVAELEKFGKIVNFRALRNTLDYLRGHVFVEYAQERHALRAFINLQGRYYASR 291
Query: 138 PIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL 173
+ V+FS + +R A C G C ++HL
Sbjct: 292 QLNVEFSNLKGWRGAVC----------GYSCAYLHL 317
>gi|302775180|ref|XP_002971007.1| hypothetical protein SELMODRAFT_94627 [Selaginella moellendorffii]
gi|300160989|gb|EFJ27605.1| hypothetical protein SELMODRAFT_94627 [Selaginella moellendorffii]
Length = 132
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/132 (42%), Positives = 81/132 (61%), Gaps = 2/132 (1%)
Query: 13 KDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPR 72
+D+ +CPF+ K GACR G RCSRLH P S TLL+ NMY P + +G
Sbjct: 2 QDKTHCPFHTKTGACRFGPRCSRLHVYPEKSCTLLIKNMYTGPGLAWE--HDEGLECTDE 59
Query: 73 KIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGR 132
+I++ FE+FYED+ E K+GE+ + +C N + H+ GNVYV ++ EE A A L+GR
Sbjct: 60 EIEEKFEEFYEDVHSEFLKFGELVNFKVCRNSSPHLRGNVYVHYQSEEDAVAACLALSGR 119
Query: 133 FYAGRPIIVDFS 144
FYA + ++ +S
Sbjct: 120 FYASKQVLARYS 131
>gi|238879039|gb|EEQ42677.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 377
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 76/125 (60%), Gaps = 1/125 (0%)
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
G+D L +IQ F+ FY+D+F ++K G+I + +C+N +H+ G+VY++F +
Sbjct: 201 GLDENHPVLTDEQIQKDFDLFYQDIFVHVAKLGQINDMAVCEN-ENHLSGHVYIKFNDYN 259
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A LN +Y G+P+ + SPV +A C+ ++ C+RG CN++H+K+ ++ +
Sbjct: 260 DAIAANLQLNQEWYNGKPVYSELSPVNILADAHCKSWDHGHCDRGAKCNYLHVKQPTQGI 319
Query: 181 RRRLF 185
++ L+
Sbjct: 320 KKSLW 324
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 32/43 (74%)
Query: 13 KDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRP 55
K V C FY KIG+CRHG+ CS+ H KP+I+ T+LL N+YQ P
Sbjct: 11 KPAVLCSFYTKIGSCRHGEECSKKHLKPTITKTILLPNLYQNP 53
>gi|68490634|ref|XP_710864.1| potential spliceosomal U2AF small subunit [Candida albicans SC5314]
gi|68490659|ref|XP_710852.1| potential spliceosomal U2AF small subunit [Candida albicans SC5314]
gi|46432105|gb|EAK91608.1| potential spliceosomal U2AF small subunit [Candida albicans SC5314]
gi|46432119|gb|EAK91621.1| potential spliceosomal U2AF small subunit [Candida albicans SC5314]
Length = 377
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 76/125 (60%), Gaps = 1/125 (0%)
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
G+D L +IQ F+ FY+D+F ++K G+I + +C+N +H+ G+VY++F +
Sbjct: 201 GLDENHPVLTDEQIQKDFDLFYQDIFVHVAKLGQINDMAVCEN-ENHLSGHVYIKFNDYN 259
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180
A A LN +Y G+P+ + SPV +A C+ ++ C+RG CN++H+K+ ++ +
Sbjct: 260 DAIAANLQLNQEWYNGKPVYSELSPVNILADAHCKSWDHGHCDRGAKCNYLHVKQPTQGI 319
Query: 181 RRRLF 185
++ L+
Sbjct: 320 KKSLW 324
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 32/43 (74%)
Query: 13 KDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRP 55
K V C FY KIG+CRHG+ CS+ H KP+I+ T+LL N+YQ P
Sbjct: 11 KTAVLCSFYTKIGSCRHGEECSKKHLKPTITKTILLPNLYQNP 53
>gi|242007963|ref|XP_002424784.1| U2 snrnp auxiliary factor, small subunit, putative [Pediculus
humanus corporis]
gi|212508307|gb|EEB12046.1| U2 snrnp auxiliary factor, small subunit, putative [Pediculus
humanus corporis]
Length = 408
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 86/181 (47%), Gaps = 32/181 (17%)
Query: 5 LASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQR---------- 54
L ++ T + C F+ K+GACR G++CSR H IS TLL+SN Y
Sbjct: 157 LQAVSETNPGKEMCLFFNKVGACRFGNQCSRNHQHFKISNTLLVSNFYSHFTLEQNKSSE 216
Query: 55 --PDMITPGVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNV 112
D+I D + HF++FY D+ E K+G++ + +C N H+ GNV
Sbjct: 217 YDTDIILEYEDSD--------MYSHFKEFYTDIVPEFKKFGDLTMVKVCCNSEPHLRGNV 268
Query: 113 YVQFREEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMH 172
Y++++ ++ A A + GR+Y D+ A C + C +G CNF+H
Sbjct: 269 YIEYKHKKDALLAYKEFQGRWYG------------DWGGAVCGDFARRRCLKGKSCNFLH 316
Query: 173 L 173
+
Sbjct: 317 V 317
>gi|198475533|ref|XP_001357071.2| GA17206 [Drosophila pseudoobscura pseudoobscura]
gi|198138864|gb|EAL34137.2| GA17206 [Drosophila pseudoobscura pseudoobscura]
Length = 448
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 88/177 (49%), Gaps = 6/177 (3%)
Query: 3 EHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGV 62
+HL + T + C F+ + +CR+G C+ H +P + LL+ + + + V
Sbjct: 154 DHLLRMVETHPEERPCEFFTRTNSCRYGHSCTFNHRRPMLGRILLIRHFFSHSLLHDKKV 213
Query: 63 DPQ------GQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQF 116
+ G + ++ +++F+ D EL K+G+I + N +H+ G+V+V++
Sbjct: 214 HKEYASADEGLEMTEHDLRSDYDEFFNDAVTELEKFGKIVNFRALRNTLEHLSGHVFVEY 273
Query: 117 REEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL 173
E+ A A NL GR+YA R + V+FS + +R A C C +G C ++HL
Sbjct: 274 ANEKCALRAFINLQGRYYASRRLNVEFSNLHTWRGAVCGLSLTRKCPKGNSCGYLHL 330
>gi|195159884|ref|XP_002020806.1| GL14474 [Drosophila persimilis]
gi|194117756|gb|EDW39799.1| GL14474 [Drosophila persimilis]
Length = 448
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 88/177 (49%), Gaps = 6/177 (3%)
Query: 3 EHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGV 62
+HL + T + C F+ + +CR+G C+ H +P + LL+ + + + V
Sbjct: 154 DHLLRMVETHPEERPCEFFTRTNSCRYGHSCTFNHRRPMLGRILLIRHFFSHSLLHDKKV 213
Query: 63 DPQ------GQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQF 116
+ G + ++ +++F+ D EL K+G+I + N +H+ G+V+V++
Sbjct: 214 HKEYASGDEGLEMTEHDLRSDYDEFFNDAVTELEKFGKIVNFRALRNTLEHLSGHVFVEY 273
Query: 117 REEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL 173
E+ A A NL GR+YA R + V+FS + +R A C C +G C ++HL
Sbjct: 274 ANEKCALRAFINLQGRYYASRRLNVEFSNLHTWRGAVCGLSLTRKCPKGNSCGYLHL 330
>gi|195386482|ref|XP_002051933.1| GJ24411 [Drosophila virilis]
gi|194148390|gb|EDW64088.1| GJ24411 [Drosophila virilis]
Length = 449
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 85/175 (48%), Gaps = 6/175 (3%)
Query: 5 LASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDP 64
L + T + C FY + CR+G C+ H +P ++ LL+ + Y P +
Sbjct: 157 LRRVVETHPEERLCEFYTRTNCCRYGHSCTFNHRRPMLAKILLIRHFYTHPLLQVDATHK 216
Query: 65 QGQALDPR-KIQDH-----FEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFRE 118
+ D ++ H +++F++D EL K+G+I + N H+ G+V+V++
Sbjct: 217 EYAGADEHLELTQHDLRADYDEFFKDATGELEKFGKIVNFRTVCNTLPHLRGHVFVEYAH 276
Query: 119 EEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL 173
E A A NL GR+YA R + V+FS + +R A C C +G C ++HL
Sbjct: 277 ERFALRAFINLQGRYYAARRLNVEFSNLKAWRGAVCGLSLTRKCPKGYSCGYLHL 331
>gi|221472666|ref|NP_608857.2| CG3294, isoform A [Drosophila melanogaster]
gi|220901945|gb|AAF50982.3| CG3294, isoform A [Drosophila melanogaster]
Length = 456
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 86/176 (48%), Gaps = 6/176 (3%)
Query: 4 HLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLL------SNMYQRPDM 57
HL + T + C F+ + CR+G C+ H +P + LL+ S + +R
Sbjct: 156 HLLRVMETHPEERACEFFSRTNCCRYGHACTFNHRRPMLGRILLIRHFFNHSMLQKRCTH 215
Query: 58 ITPGVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFR 117
+ L + ++ +++F+ D+ EEL K+G I + N +H+ G+V+V++
Sbjct: 216 KEYASAEEHLELTEQDLRHDYDEFFNDVVEELRKFGTIVNFRTVRNTLEHLRGHVFVEYT 275
Query: 118 EEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL 173
E A A NL GR+YA + + V+FS + +R A C C +G C ++HL
Sbjct: 276 NERSALRAFTNLQGRYYASKRLNVEFSNLRTWRGAVCGLSLTRKCPKGNDCGYLHL 331
>gi|195471335|ref|XP_002087960.1| GE18306 [Drosophila yakuba]
gi|194174061|gb|EDW87672.1| GE18306 [Drosophila yakuba]
Length = 496
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 102/218 (46%), Gaps = 24/218 (11%)
Query: 4 HLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLL------SNMYQRPDM 57
HL + T + C F+ + CR+G C+ H +P ++ LL+ S + +R
Sbjct: 156 HLLRVMETHPEERACEFFSRTNCCRYGHACTFNHRRPMLARILLIRHFFNHSMLQERRAH 215
Query: 58 ITPGVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFR 117
+ L + ++ +++F+ D EEL K+G I + N +H+ G+V+V++
Sbjct: 216 KEYAAAEEHLELTEQDLRHDYDEFFRDAVEELEKFGTIVNFRTVRNTLEHLRGHVFVEYT 275
Query: 118 EEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL---- 173
E A A NL GR+YA + + V+FS + +R A C G C ++HL
Sbjct: 276 SERSALRAFTNLQGRYYASKRLNVEFSNLRTWRGAVC----------GNGCGYLHLFGNP 325
Query: 174 -KKISRELRRRLFGRSRRRRSRS---RSRSRSPHKYRG 207
+ + EL RS RR S++ ++ S HK RG
Sbjct: 326 NNQFNTELEYTTGPRSERRSSQTPTAKTPSWDEHKERG 363
>gi|149035842|gb|EDL90509.1| similar to U2af1-rs2 (predicted) [Rattus norvegicus]
Length = 337
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 56/97 (57%)
Query: 77 HFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAG 136
F DFY D+ E G++ + NL H+ GNVYVQ++ EE A NGR+YAG
Sbjct: 31 QFLDFYYDVLPEFKSVGKVIQFKVSCNLEPHLRGNVYVQYQSEEDCQAAFSVFNGRWYAG 90
Query: 137 RPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL 173
R + +F PVT ++ A C +E C RG +CNF+H+
Sbjct: 91 RQLQCEFCPVTRWKMAICGLFEVQQCPRGKHCNFLHV 127
>gi|195576588|ref|XP_002078157.1| GD23299 [Drosophila simulans]
gi|194190166|gb|EDX03742.1| GD23299 [Drosophila simulans]
Length = 492
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 85/176 (48%), Gaps = 6/176 (3%)
Query: 4 HLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVD 63
HL + T + C F+ + CR+G C+ H +P + LL+ + + +
Sbjct: 156 HLLRVMETHPEERPCEFFSRTNCCRYGHACTFNHRRPMLGRILLIRHFFNHSMLQKRWAH 215
Query: 64 PQGQA------LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFR 117
+ + L + ++ +++F+ D EEL K+G I + N +H+ G+V+V++
Sbjct: 216 KEYDSAEEHLELTEQDLRHDYDEFFNDAVEELGKFGTIVNFRTVRNTLEHLRGHVFVEYT 275
Query: 118 EEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL 173
E A A NL GR+YA + + V+FS + +R A C C +G C ++HL
Sbjct: 276 NERSALRAFTNLQGRYYASKRLNVEFSNLRTWRGAVCGLSLTRKCPKGNGCGYLHL 331
>gi|294887769|ref|XP_002772227.1| splicing factor U2AF 35 kDa subunit, putative [Perkinsus marinus
ATCC 50983]
gi|239876261|gb|EER04043.1| splicing factor U2AF 35 kDa subunit, putative [Perkinsus marinus
ATCC 50983]
Length = 53
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 40/53 (75%), Positives = 44/53 (83%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQ 53
MAEHLA IFGTE+DRVNCPFYFKIG CRHGD+CSR H +P S T+LL MYQ
Sbjct: 1 MAEHLARIFGTEEDRVNCPFYFKIGTCRHGDQCSRQHNRPVSSQTVLLKGMYQ 53
>gi|194766159|ref|XP_001965192.1| GF21431 [Drosophila ananassae]
gi|190617802|gb|EDV33326.1| GF21431 [Drosophila ananassae]
Length = 314
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 80/157 (50%), Gaps = 6/157 (3%)
Query: 4 HLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVD 63
HL I T C + + CR+G C+ HT+P +S LL+ + + + V
Sbjct: 156 HLLRIMETHPGERVCELFSRTNCCRYGHSCTFNHTRPMLSRILLIRHFFSHSLLQERRVH 215
Query: 64 PQGQALDPR-KIQDH-----FEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFR 117
+ + D ++ +H F++F+ED +EL K+G I + N +H+ G+V+V++
Sbjct: 216 KEYASADEELELTEHDLRSDFDEFFEDAIKELEKFGSIVNFRAVRNTLEHLRGHVFVEYG 275
Query: 118 EEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATC 154
E A A NL GR+YA R + V+FS + +R A C
Sbjct: 276 HERSALRAFINLQGRYYASRRLNVEFSNLKTWRGAVC 312
>gi|326523703|dbj|BAJ93022.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 495
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 64/104 (61%), Gaps = 3/104 (2%)
Query: 73 KIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGR 132
+I+ +E+FYED+ E K+GE+ + +C N + H+ GNVYV ++ + A A ++NGR
Sbjct: 6 EIEQSYEEFYEDVHTEFLKFGELVNFKVCRNGSFHLRGNVYVHYKALDSALLAYNSMNGR 65
Query: 133 FYAGRPIIVDFSPVTDFREATCRQYEEN---VCNRGGYCNFMHL 173
++AG+ I +F +T ++ A C +Y + C+ G CNF+H
Sbjct: 66 YFAGKQITCEFVALTKWKSAICGEYMRSRFKTCSHGVACNFIHC 109
>gi|194856250|ref|XP_001968707.1| GG25018 [Drosophila erecta]
gi|190660574|gb|EDV57766.1| GG25018 [Drosophila erecta]
Length = 447
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 85/176 (48%), Gaps = 18/176 (10%)
Query: 5 LASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMY-------QRPDM 57
L + T + C F+ + CR+G C+ H +P ++ LL+ + + +RP
Sbjct: 157 LLRVMETHPEERACEFFSRTNCCRYGHACTFNHRRPMLARILLIRHFFNHSMLQERRPHK 216
Query: 58 ITPGVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFR 117
+ + L + ++ +++F+ D EEL K+G I + N +H+ G+V+V++
Sbjct: 217 EYASAEEHLE-LTEQDLRHDYDEFFNDAVEELRKFGTIVNFRTVRNTVEHLRGHVFVEYT 275
Query: 118 EEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL 173
E A A NL GR+YA + + V+FS + +R A C G C ++HL
Sbjct: 276 NERSALRAFTNLQGRYYASKKLNVEFSNLKTWRGAVC----------GNGCGYLHL 321
>gi|195035213|ref|XP_001989072.1| GH11518 [Drosophila grimshawi]
gi|193905072|gb|EDW03939.1| GH11518 [Drosophila grimshawi]
Length = 312
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 81/156 (51%), Gaps = 6/156 (3%)
Query: 5 LASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDP 64
L + T + C FY + CR+G C+ H +P ++ LL+ + + P +
Sbjct: 155 LQRVLETHPEERLCEFYTRTNCCRYGHSCTFNHRRPMLAKILLIRHFFTHPLLQIGDTHK 214
Query: 65 QGQALD------PRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFRE 118
+ D P+ ++ ++ F+ D+ +EL K+G+I + + N H+ G+V+V++ +
Sbjct: 215 EYANADAHLEQTPQDLRADYDAFFNDVVDELQKFGKIINFRVVCNTLPHLRGHVFVEYAQ 274
Query: 119 EEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATC 154
E +A A NL GR+YA R + V+FS + +R A C
Sbjct: 275 ERYALRAFVNLQGRYYASRRLNVEFSNLKAWRGAVC 310
>gi|195342524|ref|XP_002037850.1| GM18489 [Drosophila sechellia]
gi|194132700|gb|EDW54268.1| GM18489 [Drosophila sechellia]
Length = 447
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 83/176 (47%), Gaps = 16/176 (9%)
Query: 4 HLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVD 63
HL + T + C F+ + CR+G C+ H +P + LL+ + + +
Sbjct: 156 HLLRVMETHPEERACEFFSRTNCCRYGHACTFNHRRPMLGRILLIRHFFNHSMLQKRWTH 215
Query: 64 PQGQA------LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFR 117
+ + L + ++ +++F+ D EEL K+G I + N +H+ G+V+V++
Sbjct: 216 KEYDSAEEHLELTEQDLRHDYDEFFNDAVEELRKFGTIVNFRTVRNTLEHLRGHVFVEYT 275
Query: 118 EEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL 173
E A A NL GR+YA + + V+FS + +R A C G C ++HL
Sbjct: 276 NERSALRAFTNLQGRYYASKRLNVEFSNLRTWRGAVC----------GNGCGYLHL 321
>gi|344249745|gb|EGW05849.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2 [Cricetulus griseus]
Length = 138
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 59/110 (53%), Gaps = 4/110 (3%)
Query: 12 EKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMIT---PGVDPQGQA 68
EKDR NCPFY K GACR GDRCSR H P+ SPTLL+ +M+ M DP
Sbjct: 28 EKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDSSL 87
Query: 69 -LDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFR 117
+ F DFY D+ E G++ + NL H+ GNVYVQ++
Sbjct: 88 EYSEEETYQQFLDFYHDVLPEFKNVGKVVQFKVSCNLEPHLRGNVYVQYQ 137
>gi|325187017|emb|CCA21561.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunitrelated protein 2 [Albugo laibachii Nc14]
Length = 341
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 78/166 (46%), Gaps = 18/166 (10%)
Query: 16 VNCPFYFKIGACRHGD-RCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKI 74
++CPFY + G C G RC R H P S LLL + LD +
Sbjct: 160 ISCPFYLQTGCCPFGKHRCDRSHQAPRSSKFLLLKHF----------------CLDEILV 203
Query: 75 QDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFY 134
+ ++ ELS+ + + + NLA H+ GNVY++F EE A A + L R+Y
Sbjct: 204 DGSATELLYEMSLELSRIVSLVRVELVQNLASHLRGNVYIEFESEEGAKQAWQALRVRYY 263
Query: 135 AGRPIIVDFSPVTDFREATCRQYEENVCNRGGY-CNFMHLKKISRE 179
GR + + P+ ++ + C + + C +G CN++HL +R+
Sbjct: 264 KGRILDAELVPLVHWKASVCGSFVKGACAQGNENCNYLHLNPYNRK 309
>gi|325187018|emb|CCA21562.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunitrelated protein 2 [Albugo laibachii Nc14]
Length = 314
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 78/166 (46%), Gaps = 18/166 (10%)
Query: 16 VNCPFYFKIGACRHGD-RCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKI 74
++CPFY + G C G RC R H P S LLL + LD +
Sbjct: 133 ISCPFYLQTGCCPFGKHRCDRSHQAPRSSKFLLLKHF----------------CLDEILV 176
Query: 75 QDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFY 134
+ ++ ELS+ + + + NLA H+ GNVY++F EE A A + L R+Y
Sbjct: 177 DGSATELLYEMSLELSRIVSLVRVELVQNLASHLRGNVYIEFESEEGAKQAWQALRVRYY 236
Query: 135 AGRPIIVDFSPVTDFREATCRQYEENVCNRGGY-CNFMHLKKISRE 179
GR + + P+ ++ + C + + C +G CN++HL +R+
Sbjct: 237 KGRILDAELVPLVHWKASVCGSFVKGACAQGNENCNYLHLNPYNRK 282
>gi|224129496|ref|XP_002328731.1| predicted protein [Populus trichocarpa]
gi|222839029|gb|EEE77380.1| predicted protein [Populus trichocarpa]
Length = 546
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 66/110 (60%), Gaps = 3/110 (2%)
Query: 66 GQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANA 125
Q +++ +E+FYED+ E KYGEI + +C N + H+ GNVYV ++ + A A
Sbjct: 15 AQHYTDEEVECSYEEFYEDVHTEFLKYGEIVNFKVCKNGSFHLRGNVYVHYKSLDSAILA 74
Query: 126 LRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEEN---VCNRGGYCNFMH 172
++NGR++AG+ + +F +T ++ A C ++ ++ C+ G CNF+H
Sbjct: 75 YHSINGRYFAGKQVKCEFINLTRWKVAICGEFMKSRLKTCSHGSACNFIH 124
>gi|357445231|ref|XP_003592893.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355481941|gb|AES63144.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
Length = 1146
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 62/98 (63%), Gaps = 3/98 (3%)
Query: 78 FEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGR 137
FE+FYED+ E K+GEI + +C N + H+ GNVYVQ++ + A A ++NGR++AG+
Sbjct: 15 FEEFYEDVHTEFLKFGEIVNFKVCKNGSFHLRGNVYVQYKLLDSALLAYNSVNGRYFAGK 74
Query: 138 PIIVDFSPVTDFREATCRQYEEN---VCNRGGYCNFMH 172
+ F +T ++ A C +Y ++ C+ G CNF+H
Sbjct: 75 QVSCKFVNLTRWKVAICGEYMKSGYKTCSHGTACNFIH 112
>gi|325187019|emb|CCA21563.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunitrelated protein 2 [Albugo laibachii Nc14]
Length = 301
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 78/166 (46%), Gaps = 18/166 (10%)
Query: 16 VNCPFYFKIGACRHGD-RCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKI 74
++CPFY + G C G RC R H P S LLL + LD +
Sbjct: 120 ISCPFYLQTGCCPFGKHRCDRSHQAPRSSKFLLLKHF----------------CLDEILV 163
Query: 75 QDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFY 134
+ ++ ELS+ + + + NLA H+ GNVY++F EE A A + L R+Y
Sbjct: 164 DGSATELLYEMSLELSRIVSLVRVELVQNLASHLRGNVYIEFESEEGAKQAWQALRVRYY 223
Query: 135 AGRPIIVDFSPVTDFREATCRQYEENVCNRGGY-CNFMHLKKISRE 179
GR + + P+ ++ + C + + C +G CN++HL +R+
Sbjct: 224 KGRILDAELVPLVHWKASVCGSFVKGACAQGNENCNYLHLNPYNRK 269
>gi|140053486|gb|ABO80461.1| Concanavalin A-like lectin/glucanase; U2 auxiliary factor small
subunit [Medicago truncatula]
Length = 584
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 62/98 (63%), Gaps = 3/98 (3%)
Query: 78 FEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGR 137
FE+FYED+ E K+GEI + +C N + H+ GNVYVQ++ + A A ++NGR++AG+
Sbjct: 13 FEEFYEDVHTEFLKFGEIVNFKVCKNGSFHLRGNVYVQYKLLDSALLAYNSVNGRYFAGK 72
Query: 138 PIIVDFSPVTDFREATCRQYEEN---VCNRGGYCNFMH 172
+ F +T ++ A C +Y ++ C+ G CNF+H
Sbjct: 73 QVSCKFVNLTRWKVAICGEYMKSGYKTCSHGTACNFIH 110
>gi|13235102|emb|CAC33544.1| U2snRNP auxiliary factor small subunit (truncated) [Gallus
gallus]
Length = 49
Score = 86.7 bits (213), Expect = 1e-14, Method: Composition-based stats.
Identities = 38/48 (79%), Positives = 42/48 (87%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLL 48
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLH KP+ S +L
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQEAML 48
>gi|443697246|gb|ELT97781.1| hypothetical protein CAPTEDRAFT_161525 [Capitella teleta]
Length = 346
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 54/100 (54%)
Query: 74 IQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRF 133
+ HF +FYED+ E G + +C N H+ GNVY+Q+ E A L NGR+
Sbjct: 28 VMRHFREFYEDVTPEFRALGRLVQFKVCCNYEPHLRGNVYIQYESESDAERCLSAFNGRW 87
Query: 134 YAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL 173
YAGR + +S VT ++ A C + C +G CNF+H+
Sbjct: 88 YAGRQLSCQYSAVTQWKNAICGLFSRKKCPKGRACNFLHV 127
>gi|123474570|ref|XP_001320467.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121903273|gb|EAY08244.1| hypothetical protein TVAG_404120 [Trichomonas vaginalis G3]
Length = 225
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 81/174 (46%), Gaps = 4/174 (2%)
Query: 18 CPFYFKIGACR--HGDRCSRL-HTKPSISPTLLLSNMYQRPDMITPGVDPQGQAL-DPRK 73
C Y K GAC + +C H +S L+ ++Y PD + Q + R
Sbjct: 27 CQIYEKTGACPNDYFPKCCPFKHPIKLMSRCLVFHHLYPNPDYFASFLPKNEQTMIKTRN 86
Query: 74 IQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRF 133
+Q + F+ D++ E ++G ++ + I NL +H+ GNVYV+F E + A + L GRF
Sbjct: 87 LQSMIDSFFLDVYAEFKQFGNVQDIVIASNLTEHLYGNVYVRFNEPDEALACHKALQGRF 146
Query: 134 YAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGR 187
YAGR + C + C G C ++H +ISR++ + F R
Sbjct: 147 YAGRKVTSSLIFFDKLSSLICVSKQSGKCFHGQCCPYVHPLQISRDVFNQAFPR 200
>gi|405978554|gb|EKC42934.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 1 [Crassostrea gigas]
Length = 729
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 66/118 (55%), Gaps = 7/118 (5%)
Query: 5 LASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDM---ITPG 61
+ I GTE R C F+ K G CR GDRCSR H P +S TLL +MY ++ +
Sbjct: 503 VTLIPGTE--RETCMFFSKTGTCRFGDRCSRGHPHPEVSNTLLFHSMYNHFELEQGLKDD 560
Query: 62 VDPQGQAL--DPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFR 117
+D L D ++ +F+DFY D+ E YG++ + +C+N H+ GNVYVQ++
Sbjct: 561 LDTTDVTLEYDDGELYQNFQDFYLDIVPEFRNYGKLSQVKVCNNYEPHLRGNVYVQYK 618
>gi|256070881|ref|XP_002571770.1| arylformamidase [Schistosoma mansoni]
gi|353228669|emb|CCD74840.1| putative kynurenine aminotransferase [Schistosoma mansoni]
Length = 967
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 106/218 (48%), Gaps = 41/218 (18%)
Query: 7 SIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPS----ISPTLLLSN------------ 50
+I T ++ C F+ K GACR+G CSRLH PS I + +++
Sbjct: 166 AIVSTVMEK--CSFFRKTGACRYGFLCSRLHQYPSRYDDIIESFNIADDQDVGGLDEPID 223
Query: 51 ----MYQRPDMIT---------PGVDPQ--GQALDPRKIQDHFEDFYEDLFEEL-SKYGE 94
+ Q P M T + Q G +D ++ + +FY D+ EL S++G+
Sbjct: 224 NSCLVLQIPKMFTHYHLDLTKNTSSEDQDSGLEVDESQLLSDYHEFYHDVRMELESRWGK 283
Query: 95 IESLNICDNLADHMVGNVYVQF-REEEHAANALRNLNGRFYAGRPIIVDFSPV-TDFREA 152
I + C NLADH+ G+VYV+F R A +A NGR++AGR + + +REA
Sbjct: 284 ISVIRTCRNLADHLRGSVYVEFSRGPSAAWDAAEACNGRWFAGRKLTCTVVRLGGGWREA 343
Query: 153 TCRQYEENVCNRGG-YCNFMHL----KKISRELRRRLF 185
C Y C +G +CNF+H+ + S +L++ L+
Sbjct: 344 ICGLYHRGKCPKGDLHCNFLHVFLNPGETSNDLQKTLW 381
>gi|197127860|gb|ACH44358.1| putative U2 snRNP auxiliary factor small subunit variant 1
[Taeniopygia guttata]
Length = 42
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/42 (88%), Positives = 40/42 (95%)
Query: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSI 42
MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLH KP+I
Sbjct: 1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPNI 42
>gi|21483354|gb|AAM52652.1| GM14666p [Drosophila melanogaster]
Length = 321
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 78/157 (49%), Gaps = 6/157 (3%)
Query: 4 HLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLL------SNMYQRPDM 57
HL + T + C F+ + CR+G C+ H +P + LL+ S + +R
Sbjct: 163 HLLRVMETHPEERACEFFSRTNCCRYGHACTFNHRRPMLGRILLIRHFFNHSMLQKRCTH 222
Query: 58 ITPGVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFR 117
+ L + ++ +++F+ D+ EEL K+G I + N +H+ G+V+V++
Sbjct: 223 KEYASAEEHLELTEQDLRHDYDEFFNDVVEELRKFGTIVNFRTVRNTLEHLRGHVFVEYT 282
Query: 118 EEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATC 154
E A A NL GR+YA + + V+FS + +R A C
Sbjct: 283 NERSALRAFTNLQGRYYASKRLNVEFSNLRTWRGAVC 319
>gi|28574034|ref|NP_787976.1| CG3294, isoform B [Drosophila melanogaster]
gi|28380246|gb|AAO41150.1| CG3294, isoform B [Drosophila melanogaster]
Length = 314
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 78/157 (49%), Gaps = 6/157 (3%)
Query: 4 HLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLL------SNMYQRPDM 57
HL + T + C F+ + CR+G C+ H +P + LL+ S + +R
Sbjct: 156 HLLRVMETHPEERACEFFSRTNCCRYGHACTFNHRRPMLGRILLIRHFFNHSMLQKRCTH 215
Query: 58 ITPGVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFR 117
+ L + ++ +++F+ D+ EEL K+G I + N +H+ G+V+V++
Sbjct: 216 KEYASAEEHLELTEQDLRHDYDEFFNDVVEELRKFGTIVNFRTVRNTLEHLRGHVFVEYT 275
Query: 118 EEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATC 154
E A A NL GR+YA + + V+FS + +R A C
Sbjct: 276 NERSALRAFTNLQGRYYASKRLNVEFSNLRTWRGAVC 312
>gi|195114372|ref|XP_002001741.1| GI17015 [Drosophila mojavensis]
gi|193912316|gb|EDW11183.1| GI17015 [Drosophila mojavensis]
Length = 170
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 78/144 (54%), Gaps = 8/144 (5%)
Query: 18 CPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQA-------LD 70
C FY + CR+G+ C+ H +P ++ LL+ + + P ++ G + A L
Sbjct: 26 CEFYTRTNCCRYGNSCTFNHRRPMLAKILLIRHFFTHP-LLQVGETHKEYASTDEHLELT 84
Query: 71 PRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLN 130
+ +++ +++F+ D EL K+G+I + N H+ G+V+V++ +E A A NL
Sbjct: 85 EQDLRNDYDEFFNDAIGELQKFGKILNFRAVRNTLPHLRGHVFVEYAQERFALRAFVNLQ 144
Query: 131 GRFYAGRPIIVDFSPVTDFREATC 154
GR+YA R + V+FS + +R A C
Sbjct: 145 GRYYASRRLQVEFSNLKGWRGAVC 168
>gi|157141689|ref|XP_001647741.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit
related-protein 2 [Aedes aegypti]
gi|108867907|gb|EAT32409.1| AAEL015434-PA, partial [Aedes aegypti]
Length = 296
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 68/133 (51%), Gaps = 6/133 (4%)
Query: 46 LLLSNMYQRPDM-----ITPGVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNI 100
LLL N + P + G+D + D ++ + +F+ D+ EE +G I +
Sbjct: 2 LLLPNFFAHPALDHQQHPEYGLDSSIE-FDDDELYRSYTEFFMDVIEEFESFGPISGFFV 60
Query: 101 CDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEEN 160
N H+ GNVYVQ+ + AA A + +NGRFYA + + V+F + A C +E +
Sbjct: 61 TRNFEPHLRGNVYVQYEKVRDAAKAYQRMNGRFYASKQLRVEFRAPIVWTAAVCGLFERS 120
Query: 161 VCNRGGYCNFMHL 173
C +G CN++HL
Sbjct: 121 RCQKGKSCNYLHL 133
>gi|156379393|ref|XP_001631442.1| predicted protein [Nematostella vectensis]
gi|156218482|gb|EDO39379.1| predicted protein [Nematostella vectensis]
Length = 361
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 49/80 (61%)
Query: 78 FEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGR 137
+E+F+ D+ E K G++ C N H+ GNVYVQF++EE A A NGR+YA +
Sbjct: 15 YEEFFNDVLPEFEKAGKVVQFKACCNYEPHLRGNVYVQFKDEESCARAFAAFNGRWYAQK 74
Query: 138 PIIVDFSPVTDFREATCRQY 157
+ +FSPVT ++ A C ++
Sbjct: 75 QLSCEFSPVTRWKSAICDRF 94
>gi|413937280|gb|AFW71831.1| hypothetical protein ZEAMMB73_658558 [Zea mays]
Length = 272
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 51/85 (60%), Gaps = 2/85 (2%)
Query: 11 TEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALD 70
++D+ +CPF+ K GACR G RCSR+H P S TLL+ NMY P + +G
Sbjct: 174 IQEDKAHCPFHLKTGACRFGLRCSRVHFYPDKSITLLMKNMYNGPGLALE--QDEGLEFT 231
Query: 71 PRKIQDHFEDFYEDLFEELSKYGEI 95
+I+ +E+FYED+ E K+GE+
Sbjct: 232 DEEIEQSYEEFYEDVHTEFLKFGEL 256
>gi|239505105|gb|ACR78698.1| U2 small nuclear auxiliary factor 1 [Rimicaris exoculata]
Length = 53
Score = 74.7 bits (182), Expect = 5e-11, Method: Composition-based stats.
Identities = 33/50 (66%), Positives = 40/50 (80%)
Query: 2 AEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNM 51
AE+LASI+GTEKD+VNC FY K GACRH +RCSR H KP S T+++ NM
Sbjct: 4 AEYLASIYGTEKDKVNCSFYIKTGACRHSERCSRKHNKPQYSQTVVMQNM 53
>gi|359082061|ref|XP_003588255.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Bos taurus]
Length = 130
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Query: 12 EKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPG---VDPQGQA 68
EKDR NCPFY K GACR GDRCSR H P+ SPTLL+ +M+ M G DP
Sbjct: 28 EKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCGRDDYDPDANL 87
Query: 69 -LDPRKIQDHFEDFYEDLFEELSKYGEI 95
+I F DFY+D+ E G++
Sbjct: 88 EYSEEEIYQQFLDFYDDVLPEFKNVGKV 115
>gi|170038926|ref|XP_001847298.1| U2 snrnp auxiliary factor [Culex quinquefasciatus]
gi|167862539|gb|EDS25922.1| U2 snrnp auxiliary factor [Culex quinquefasciatus]
Length = 398
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 59/119 (49%), Gaps = 6/119 (5%)
Query: 3 EHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRP---DMIT 59
E L + T C F+ KIG CR+G RCS H P +S LL+ N + P D
Sbjct: 152 ESLCQMVDTRPGANVCGFFGKIGVCRYGIRCSSNHPTPGLSQLLLIPNFFAHPALDDRNN 211
Query: 60 P--GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQF 116
P G D G D ++ + +F+ D+ E +G I + +C N A H+ GNV++Q+
Sbjct: 212 PEYGTDS-GIEFDEDELYRCYNEFFHDIIAEFESFGLIRYIFVCRNHAVHLRGNVFIQY 269
>gi|302785351|ref|XP_002974447.1| hypothetical protein SELMODRAFT_18213 [Selaginella moellendorffii]
gi|300158045|gb|EFJ24669.1| hypothetical protein SELMODRAFT_18213 [Selaginella moellendorffii]
Length = 56
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 40/56 (71%)
Query: 129 LNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRL 184
LNGRFY+GR I + SPVTDFREA+CRQ E+ C+RG CNF+ L SR L R L
Sbjct: 1 LNGRFYSGRSIAAELSPVTDFREASCRQEEQGGCSRGRCCNFLDLYHPSRALMRAL 56
>gi|242065404|ref|XP_002453991.1| hypothetical protein SORBIDRAFT_04g022813 [Sorghum bicolor]
gi|241933822|gb|EES06967.1| hypothetical protein SORBIDRAFT_04g022813 [Sorghum bicolor]
Length = 263
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 35/49 (71%)
Query: 9 FGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDM 57
FGTE+D+ +CPF+ K GACR G RCSR+H P S TLL+ NMY P +
Sbjct: 206 FGTEQDKAHCPFHLKTGACRFGVRCSRVHFYPDKSSTLLMKNMYNGPGL 254
>gi|253746096|gb|EET01601.1| Splicing factor U2AF subunit, putative [Giardia intestinalis ATCC
50581]
Length = 191
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 74/160 (46%), Gaps = 17/160 (10%)
Query: 18 CPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKIQDH 77
C F+ G CRHG C HT + L+L N + P+ Q D ++
Sbjct: 13 CRFHECTGYCRHGTECRNRHTLFTGGRMLMLRN-----------IIPRIQYTDRAELYKF 61
Query: 78 FEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGR 137
++ +ED+F L + G ++ + +N +H+ G VY Q+ + A +A L+ +YAG
Sbjct: 62 YDHCFEDIFLRLVQLGPLQDFLVAEN-TNHLAGTVYAQYASQVAAQDAASKLSDTYYAGF 120
Query: 138 PIIVDFSPVTDFREATCR-QYEE----NVCNRGGYCNFMH 172
P+ + V + + CR +Y + C G C+F+H
Sbjct: 121 PVKAEVIGVENVHKMLCRDEYASGKPGSKCAHGLSCSFVH 160
>gi|140053487|gb|ABO80462.1| U2 auxiliary factor small subunit [Medicago truncatula]
Length = 251
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 34/49 (69%)
Query: 9 FGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDM 57
FGTE D+ +CPF+ K ACR GDRCSR+H P S TLL+ NMY P +
Sbjct: 184 FGTELDKAHCPFHLKTAACRFGDRCSRVHFYPDKSCTLLIKNMYNGPGL 232
>gi|308161619|gb|EFO64057.1| Splicing factor U2AF subunit, putative [Giardia lamblia P15]
Length = 191
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 72/160 (45%), Gaps = 17/160 (10%)
Query: 18 CPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKIQDH 77
C F+ G CRHG C H + L+L N + P+ Q D ++
Sbjct: 13 CRFHECTGYCRHGTECRNRHALFTGGRMLMLRN-----------IIPRIQHKDKAELYRF 61
Query: 78 FEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGR 137
++ +ED+F L++ G ++ + +N +H+ G VY Q+ + A + L+ +YAG
Sbjct: 62 YDHCFEDIFLRLAQLGPMQDFLVAEN-TNHLAGTVYAQYTSQVAAQDVASKLSNTYYAGF 120
Query: 138 PIIVDFSPVTDFREATCR-QYEE----NVCNRGGYCNFMH 172
P+ + V + CR +Y N C G C+F+H
Sbjct: 121 PVKAEVIGVESIHKTLCRDEYASGKSGNKCAHGLSCSFVH 160
>gi|359392834|gb|AEV45824.1| rough endosperm 3-umu1 gamma isoform [Zea mays]
Length = 311
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 35/49 (71%)
Query: 9 FGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDM 57
FGTE+D+ +CPF+ K GACR G RCSR+H P S TLL+ NMY P +
Sbjct: 252 FGTEQDKAHCPFHLKTGACRFGLRCSRVHFYPDKSITLLMKNMYNGPGL 300
>gi|325187016|emb|CCA21560.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunitrelated protein 2 [Albugo laibachii Nc14]
Length = 344
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 55/107 (51%), Gaps = 1/107 (0%)
Query: 68 ALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALR 127
LD + + ++ ELS+ + + + NLA H+ GNVY++F EE A A +
Sbjct: 200 CLDEILVDGSATELLYEMSLELSRIVSLVRVELVQNLASHLRGNVYIEFESEEGAKQAWQ 259
Query: 128 NLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGY-CNFMHL 173
L R+Y GR + + P+ ++ + C + + C +G CN++HL
Sbjct: 260 ALRVRYYKGRILDAELVPLVHWKASVCGSFVKGACAQGNENCNYLHL 306
>gi|359392864|gb|AEV45839.1| rough endosperm 3 delta isoform [Zea mays]
Length = 289
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 35/49 (71%)
Query: 9 FGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDM 57
FGTE+D+ +CPF+ K GACR G RCSR+H P S TLL+ NMY P +
Sbjct: 217 FGTEQDKAHCPFHLKTGACRFGLRCSRVHFYPDKSITLLMKNMYNGPGL 265
>gi|359392846|gb|AEV45830.1| rough endosperm 3 gamma isoform 1 [Zea mays]
gi|359392848|gb|AEV45831.1| rough endosperm 3 gamma isoform 2 [Zea mays]
gi|359392850|gb|AEV45832.1| rough endosperm 3 gamma isoform 3 [Zea mays]
gi|359392852|gb|AEV45833.1| rough endosperm 3 gamma isoform 4 [Zea mays]
gi|359392854|gb|AEV45834.1| rough endosperm 3 gamma isoform 5 [Zea mays]
gi|359392856|gb|AEV45835.1| rough endosperm 3 gamma isoform 6 [Zea mays]
gi|359392858|gb|AEV45836.1| rough endosperm 3 gamma isoform 7 [Zea mays]
gi|359392860|gb|AEV45837.1| rough endosperm 3 gamma isoform 8 [Zea mays]
gi|359392862|gb|AEV45838.1| rough endosperm 3 gamma isoform 9 [Zea mays]
Length = 276
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 35/49 (71%)
Query: 9 FGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDM 57
FGTE+D+ +CPF+ K GACR G RCSR+H P S TLL+ NMY P +
Sbjct: 217 FGTEQDKAHCPFHLKTGACRFGLRCSRVHFYPDKSITLLMKNMYNGPGL 265
>gi|224129492|ref|XP_002328730.1| predicted protein [Populus trichocarpa]
gi|222839028|gb|EEE77379.1| predicted protein [Populus trichocarpa]
Length = 71
Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/49 (55%), Positives = 35/49 (71%)
Query: 9 FGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDM 57
FGTE+D+ +CPF+ K GACR G RCSR+H P + TLL+ NMY P +
Sbjct: 12 FGTEQDKAHCPFHLKTGACRFGQRCSRVHFYPDKACTLLIKNMYNGPGL 60
>gi|359392838|gb|AEV45826.1| rough endosperm 3 beta isoform 1 [Zea mays]
gi|359392840|gb|AEV45827.1| rough endosperm 3 beta isoform 2 [Zea mays]
gi|359392842|gb|AEV45828.1| rough endosperm 3 beta isoform 3 [Zea mays]
gi|359392844|gb|AEV45829.1| rough endosperm 3 beta isoform 4 [Zea mays]
Length = 302
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 35/49 (71%)
Query: 9 FGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDM 57
FGTE+D+ +CPF+ K GACR G RCSR+H P S TLL+ NMY P +
Sbjct: 217 FGTEQDKAHCPFHLKTGACRFGLRCSRVHFYPDKSITLLMKNMYNGPGL 265
>gi|325187020|emb|CCA21564.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunitrelated protein 2 [Albugo laibachii Nc14]
Length = 304
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 58/113 (51%), Gaps = 1/113 (0%)
Query: 68 ALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALR 127
LD + + ++ ELS+ + + + NLA H+ GNVY++F EE A A +
Sbjct: 160 CLDEILVDGSATELLYEMSLELSRIVSLVRVELVQNLASHLRGNVYIEFESEEGAKQAWQ 219
Query: 128 NLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGY-CNFMHLKKISRE 179
L R+Y GR + + P+ ++ + C + + C +G CN++HL +R+
Sbjct: 220 ALRVRYYKGRILDAELVPLVHWKASVCGSFVKGACAQGNENCNYLHLNPYNRK 272
>gi|302785353|ref|XP_002974448.1| hypothetical protein SELMODRAFT_101529 [Selaginella
moellendorffii]
gi|300158046|gb|EFJ24670.1| hypothetical protein SELMODRAFT_101529 [Selaginella
moellendorffii]
Length = 69
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/41 (73%), Positives = 33/41 (80%)
Query: 13 KDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQ 53
+DRVNCPFY K+GACR DRCSR H KP S TLLL+NMYQ
Sbjct: 1 QDRVNCPFYLKMGACRRRDRCSRAHLKPKQSCTLLLNNMYQ 41
>gi|357445229|ref|XP_003592892.1| Splicing factor U2af 38 kDa subunit [Medicago truncatula]
gi|355481940|gb|AES63143.1| Splicing factor U2af 38 kDa subunit [Medicago truncatula]
Length = 300
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 34/49 (69%)
Query: 9 FGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDM 57
FGTE D+ +CPF+ K ACR GDRCSR+H P S TLL+ NMY P +
Sbjct: 184 FGTELDKAHCPFHLKTAACRFGDRCSRVHFYPDKSCTLLIKNMYNGPGL 232
>gi|119629908|gb|EAX09503.1| U2(RNU2) small nuclear RNA auxiliary factor 1, isoform CRA_c [Homo
sapiens]
Length = 128
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 38/44 (86%), Gaps = 1/44 (2%)
Query: 74 IQDHFEDFYEDLFEELS-KYGEIESLNICDNLADHMVGNVYVQF 116
+Q+H+++F+E++F E+ KYGE+E +N+CDNL DH+VGNVYV+
Sbjct: 1 MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKV 44
>gi|156379395|ref|XP_001631443.1| predicted protein [Nematostella vectensis]
gi|156218483|gb|EDO39380.1| predicted protein [Nematostella vectensis]
Length = 357
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 33/45 (73%)
Query: 9 FGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQ 53
FGTE+D VNC FY K G+CR G+RCSR H +P S TLL+ MYQ
Sbjct: 189 FGTEQDTVNCAFYLKTGSCRFGERCSRQHPRPPSSVTLLIPGMYQ 233
>gi|159112951|ref|XP_001706703.1| Splicing factor U2AF subunit, putative [Giardia lamblia ATCC 50803]
gi|157434802|gb|EDO79029.1| Splicing factor U2AF subunit, putative [Giardia lamblia ATCC 50803]
Length = 193
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 17/160 (10%)
Query: 18 CPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKIQDH 77
C F+ G CRHG C H + L+L N + P+ Q D ++
Sbjct: 15 CRFHECTGYCRHGTECRNRHALFTDGRMLMLRN-----------IIPRIQHKDKAELYKF 63
Query: 78 FEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGR 137
++ +ED+F L++ G ++ + +N +H+ G VY Q+ + A + L+ +YAG
Sbjct: 64 YDHCFEDIFLRLAQLGPMQDFLVAEN-TNHLAGTVYAQYASQVAAQDVASKLSNTYYAGF 122
Query: 138 PIIVDFSPVTDFREATCR-QYEE----NVCNRGGYCNFMH 172
P+ + V + CR +Y + C G C+F+H
Sbjct: 123 PVKAEVIGVESIHKTLCRDEYASGKSGSKCAHGLSCSFVH 162
>gi|358334074|dbj|GAA52523.1| kynurenine---oxoglutarate transaminase [Clonorchis sinensis]
Length = 1330
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 81/185 (43%), Gaps = 30/185 (16%)
Query: 18 CPFYFKIGACRHGDRCSRLHTKPS-----------------ISPTLLLSNMYQRPDMITP 60
C F+ K G CR+G CSR H P L + +M+ P + P
Sbjct: 455 CSFFRKTGTCRYGFSCSRRHDYPQRIESAVEEDAAAEDGDHSCIVLCIPHMFTHPHLPPP 514
Query: 61 GV------DPQGQALDPRKI--QDHFEDFYEDLFEEL-SKYGEIESLNICDNLADHMVGN 111
D + D + D+ E FY D+ +EL +++G + +L C N +H+ G
Sbjct: 515 DATSGELEDSGTLSADEESVLCADYVE-FYHDVRDELEARWGRVAALRTCRNRTEHLRGT 573
Query: 112 VYVQFREEEHAA-NALRNLNGRFYAGRPIIVDFSPV-TDFREATCRQYEENVCNRG-GYC 168
VYV+F A +A GR++AGR + + +REA C + C +G C
Sbjct: 574 VYVEFALGSGATWDAAEACAGRWFAGRQLTCMVVRLGGGWREAICGLHHRRRCPKGDSKC 633
Query: 169 NFMHL 173
NF+H+
Sbjct: 634 NFLHV 638
>gi|242061866|ref|XP_002452222.1| hypothetical protein SORBIDRAFT_04g021976 [Sorghum bicolor]
gi|241932053|gb|EES05198.1| hypothetical protein SORBIDRAFT_04g021976 [Sorghum bicolor]
Length = 88
Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/49 (51%), Positives = 33/49 (67%)
Query: 9 FGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDM 57
FGT++D+V+CPF+ GAC G RC R+H P S TLL+ NMY P +
Sbjct: 29 FGTKQDKVHCPFHLMTGACCFGVRCGRVHFYPDKSSTLLMKNMYSDPGL 77
>gi|156344584|ref|XP_001621239.1| hypothetical protein NEMVEDRAFT_v1g222211 [Nematostella vectensis]
gi|156206977|gb|EDO29139.1| predicted protein [Nematostella vectensis]
Length = 220
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 28/40 (70%)
Query: 14 DRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQ 53
D VNC FY K G+CR G+RCSR H +P S TLL+ MYQ
Sbjct: 162 DTVNCAFYLKTGSCRFGERCSRQHPRPPSSVTLLIPGMYQ 201
>gi|221058957|ref|XP_002260124.1| splicing factor [Plasmodium knowlesi strain H]
gi|193810197|emb|CAQ41391.1| splicing factor, putative [Plasmodium knowlesi strain H]
Length = 970
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 15/111 (13%)
Query: 33 CSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKIQDHFEDFYEDLFEELSKY 92
++ +T +I+P L+L NM+ P+ G DP D F D ED+ EE SKY
Sbjct: 864 AAQSNTLNNITPNLVLCNMFS-PNDENIGSDP-----------DFFSDIIEDVKEECSKY 911
Query: 93 GEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVDF 143
G I + + D G +Y+++ +++ A A + LNGR++ G I F
Sbjct: 912 GSITKIWMDTKNID---GKIYIKYTKQDEAFKAFQFLNGRYFGGSLINAYF 959
>gi|241561670|ref|XP_002401206.1| U2 snrnp auxiliary factor, small subunit, putative [Ixodes
scapularis]
gi|215499816|gb|EEC09310.1| U2 snrnp auxiliary factor, small subunit, putative [Ixodes
scapularis]
Length = 409
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 34/55 (61%)
Query: 119 EEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHL 173
EE A AL NGR+YAGR I +FSPV ++ A C + N C +G CNF+H+
Sbjct: 156 EEEATRALVMFNGRWYAGRQISCEFSPVQRWKSAICGLFFRNRCPKGRGCNFLHV 210
>gi|161612122|gb|AAI56009.1| LOC100135135 protein [Xenopus (Silurana) tropicalis]
Length = 260
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 125 ALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKK 175
A NGR+YA R + +FSPVT ++ A C +E C RG +CNF+H+ K
Sbjct: 3 AFTQFNGRWYASRQLQCEFSPVTRWKTAICGLFERQKCPRGKHCNFLHVFK 53
>gi|119589408|gb|EAW69002.1| hCG1642635 [Homo sapiens]
Length = 145
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 31/41 (75%), Gaps = 2/41 (4%)
Query: 12 EKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMY 52
EKD VNCPFY K GACR GDRCS H P+ SPTLL+ +M+
Sbjct: 22 EKDGVNCPFYSKTGACRFGDRCS--HDFPTSSPTLLIKSMF 60
>gi|156099298|ref|XP_001615651.1| splicing factor [Plasmodium vivax Sal-1]
gi|148804525|gb|EDL45924.1| splicing factor, putative [Plasmodium vivax]
Length = 1016
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 16/113 (14%)
Query: 42 ISPTLLLSNMYQRPDMITPGVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNIC 101
I+P L+L NM+ P+ + G DP D F D ED+ EE SKYG I + +
Sbjct: 919 ITPNLVLCNMFS-PNDESIGSDP-----------DFFTDIIEDVKEECSKYGSIAKIWLD 966
Query: 102 DNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATC 154
+ ++ G +Y+++ + + A + LNGR++ G +I + + ++TC
Sbjct: 967 ---SKNIDGKIYIKYATPDESLKAFQFLNGRYFGG-SLISAYFITAEVWDSTC 1015
>gi|389585114|dbj|GAB67845.1| splicing factor [Plasmodium cynomolgi strain B]
Length = 877
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 60/118 (50%), Gaps = 16/118 (13%)
Query: 37 HTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIE 96
+T +I+P L+L NM+ P+ + G DP D F D ED+ EE SKYG +
Sbjct: 775 NTLNNITPNLVLCNMFS-PNDESIGSDP-----------DFFTDIIEDVKEECSKYGSVT 822
Query: 97 SLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATC 154
+ + ++ G +Y+++ + + A + LNGR++ G +I + T+ ++ C
Sbjct: 823 KIWLD---TKNIDGKIYIKYANNDESLKAFQFLNGRYFGG-SLINAYFLTTEMWDSIC 876
>gi|449547880|gb|EMD38847.1| hypothetical protein CERSUDRAFT_81656 [Ceriporiopsis subvermispora
B]
Length = 476
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 46/97 (47%), Gaps = 24/97 (24%)
Query: 71 PRKIQD--HFEDFYEDLFEELSKYGEIESLNI--------------------CDNLADHM 108
P ++QD + D YED+ EE +YG +E L I LAD
Sbjct: 352 PEELQDDQEYADIYEDITEECGRYGAVEDLRIPRPVKRDKAKWGENGMDSARAAQLADEA 411
Query: 109 --VGNVYVQFREEEHAANALRNLNGRFYAGRPIIVDF 143
VG VYV++ + AANAL+ L GR +AGR II
Sbjct: 412 AGVGRVYVKYAQPNSAANALKALAGRSFAGRSIIATL 448
>gi|340371085|ref|XP_003384076.1| PREDICTED: hypothetical protein LOC100639094 [Amphimedon
queenslandica]
Length = 692
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 65/127 (51%), Gaps = 16/127 (12%)
Query: 63 DPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHA 122
DP+ +DP I D +DL EE SK+GE++ + + D H+ G V F+E E A
Sbjct: 262 DPKEFEVDPTLITD----IRDDLREECSKFGEVKKVLVFDR---HVDGVASVAFKEFEPA 314
Query: 123 ANALRNLNGRFYAGRPI-IVDFSPVTDF--------REATCRQYEENVCNRGGYCNFMHL 173
A+ +NGR+YAGR + + + VT++ RE +Q+EE + + +++
Sbjct: 315 EAAITAMNGRYYAGRQLEVFLWDGVTNYQIEETDKERELRLKQWEEYLQSGASKSFLLYI 374
Query: 174 KKISREL 180
+S +
Sbjct: 375 PSLSLTI 381
>gi|428672327|gb|EKX73241.1| RNA recognition motif domain containing protein [Babesia equi]
Length = 511
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 57/106 (53%), Gaps = 18/106 (16%)
Query: 43 SPTLLLSNMYQRPDMITPGVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICD 102
+ ++LSNM+ D PG D +P + F + ED+ EE KYG++ ++ +
Sbjct: 416 TSNIILSNMFTAND---PGAD------EP----NFFVEIEEDVKEECEKYGKVVAVYLNK 462
Query: 103 NLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVDFSPVTD 148
D G V+V+F+ A+ A + LNGR++AG I V++ VTD
Sbjct: 463 KTID---GKVWVKFQNSTDASTAYKGLNGRYFAGNTIKVEY--VTD 503
>gi|440468063|gb|ELQ37246.1| splicing factor U2AF 50 kDa subunit [Magnaporthe oryzae Y34]
gi|440489023|gb|ELQ68704.1| splicing factor U2AF 50 kDa subunit [Magnaporthe oryzae P131]
Length = 640
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 52/119 (43%), Gaps = 19/119 (15%)
Query: 40 PSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLN 99
P +SP L L NM +++ D +E+ ED+ EE +KYG + L
Sbjct: 517 PDLSPVLQLLNMVTADELMD---------------NDDYEEICEDVQEECAKYGTVIELK 561
Query: 100 I----CDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATC 154
+ VG +YV+F E + AL+ L GR +A R ++ + P +F C
Sbjct: 562 VPRPSSGAKQAAGVGKIYVKFDSIESSTKALKALGGRKFADRTVVTTYFPEENFAVNAC 620
>gi|320170643|gb|EFW47542.1| splicing factor u2af large subunit [Capsaspora owczarzaki ATCC
30864]
Length = 393
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 54/98 (55%), Gaps = 12/98 (12%)
Query: 49 SNMYQRPDMITPGVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLAD-- 106
+ + Q +M+TP + +DP + ++D +D+ EE SKYGE+ S+ I +
Sbjct: 294 TPVVQLLNMVTPE-----ELMDP----EEYQDIVDDIREECSKYGEVVSVAIPRPVPGRE 344
Query: 107 -HMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVDF 143
VG VYV+F +HA AL+ L+GR +A R ++ F
Sbjct: 345 VSGVGKVYVEFSNVDHAYQALQALSGRKFASRIVVTSF 382
>gi|448118323|ref|XP_004203467.1| Piso0_001076 [Millerozyma farinosa CBS 7064]
gi|448120732|ref|XP_004204050.1| Piso0_001076 [Millerozyma farinosa CBS 7064]
gi|359384335|emb|CCE79039.1| Piso0_001076 [Millerozyma farinosa CBS 7064]
gi|359384918|emb|CCE78453.1| Piso0_001076 [Millerozyma farinosa CBS 7064]
Length = 581
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 13/96 (13%)
Query: 68 ALDPRKIQD--HFEDFYEDLFEELSKYGEIESLNI-----------CDNLADHMVGNVYV 114
A+ PR+I+D FE D+ E+SKYG ++S+ + +L + VG +++
Sbjct: 482 AVSPREIRDKAEFEFIINDIVNEVSKYGRVKSVKVPQPSSEYYQISLSDLPEPHVGRIFI 541
Query: 115 QFREEEHAANALRNLNGRFYAGRPIIVDFSPVTDFR 150
+ +E+ A NA+ L GR Y R ++ F D++
Sbjct: 542 ELEDEDSALNAIMKLAGRLYNDRVVVCAFFDYNDYK 577
>gi|170088030|ref|XP_001875238.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650438|gb|EDR14679.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 370
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 56/121 (46%), Gaps = 16/121 (13%)
Query: 39 KPSISPTLLLSNMYQRPDMITP-GVDPQGQA--------LDPRKIQD--HFEDFYEDLFE 87
P + P L + P I P G DP + + P + D + D YED+ E
Sbjct: 222 TPGMIPNLPYDQFPEIPRPIMPAGKDPATDSRILLMLNMVTPDDLTDDQEYGDLYEDVKE 281
Query: 88 ELSKYGEIESLNICDNLADHM-----VGNVYVQFREEEHAANALRNLNGRFYAGRPIIVD 142
E S YG +E L I A + VG VYV++++ E A AL NL GR +AGR II
Sbjct: 282 ECSNYGAVEDLRIPRPDAVRLDEASGVGRVYVKYKDSESATAALNNLAGRSFAGRSIIAT 341
Query: 143 F 143
Sbjct: 342 L 342
>gi|341038664|gb|EGS23656.1| hypothetical protein CTHT_0003520 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 584
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 55/110 (50%), Gaps = 14/110 (12%)
Query: 49 SNMYQRPDMITPGVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNIC----DNL 104
S + Q +M+TP + +D D +E+ ED+ EE K+G + SL I N
Sbjct: 484 SRVLQLLNMVTPE-----ELMD----NDDYEEIREDVLEECKKFGNVLSLKIPRPIGGNR 534
Query: 105 ADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATC 154
VG +YV+F + E A ALR L GR ++ R ++ + P ++ E C
Sbjct: 535 QSAGVGKIYVKFEQVESATKALRALAGRKFSDRTVVTTYFPEENY-EVNC 583
>gi|401410470|ref|XP_003884683.1| hypothetical protein NCLIV_050810 [Neospora caninum Liverpool]
gi|325119101|emb|CBZ54653.1| hypothetical protein NCLIV_050810 [Neospora caninum Liverpool]
Length = 119
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 5/65 (7%)
Query: 51 MYQRPDM---ITPGVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADH 107
MY P + I G + + LD + DHFE F+ ++FEEL+KYGE+E + +CDN+ +
Sbjct: 1 MYPNPPVAVAIAEGQNVSDELLD--QAADHFEAFFSEVFEELAKYGEVEDMVVCDNIEET 58
Query: 108 MVGNV 112
+ +V
Sbjct: 59 ISEDV 63
>gi|440791603|gb|ELR12841.1| splicing factor, CC1like subfamily protein [Acanthamoeba
castellanii str. Neff]
Length = 594
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 3/64 (4%)
Query: 80 DFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPI 139
D ED+ EE SKYG++ C + D G VY++F E AA A++ LNGR++AG+ I
Sbjct: 522 DIQEDVTEECSKYGKVLQ---CHVVRDSPSGLVYLRFESSEGAAKAIQALNGRWFAGKVI 578
Query: 140 IVDF 143
+F
Sbjct: 579 SAEF 582
>gi|348681357|gb|EGZ21173.1| hypothetical protein PHYSODRAFT_488481 [Phytophthora sojae]
Length = 640
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Query: 68 ALDPRKIQDHFEDFYEDLFEELSKYGEIESLNIC---DNLADHMVGNVYVQFREEEHAAN 124
++D + D + D ED+ EE ++G + L I D +G +YV+F EE++A +
Sbjct: 550 SIDELRDDDEYADLAEDVEEECKRFGNVTGLEIPRPKDGEEVPGLGCIYVRFEEEKNAVD 609
Query: 125 ALRNLNGRFYAGRPIIVDFSPVTDF 149
AL+ LNGR + G + V + P+ F
Sbjct: 610 ALKALNGRKFGGNIVKVTYFPLDKF 634
>gi|395331854|gb|EJF64234.1| hypothetical protein DICSQDRAFT_144911 [Dichomitus squalens
LYAD-421 SS1]
Length = 587
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 44/97 (45%), Gaps = 24/97 (24%)
Query: 71 PRKIQD--HFEDFYEDLFEELSKYGEIESLNI--------------------CDNLADHM 108
P ++QD + D ED+ EE KYGE+E L I AD
Sbjct: 463 PEELQDDQEYADILEDVKEECGKYGEVEDLRIPRPVKKDKAKWGEGGRDSALAQQRADEA 522
Query: 109 --VGNVYVQFREEEHAANALRNLNGRFYAGRPIIVDF 143
VG VYV++ AANAL+ L GR +AGR II
Sbjct: 523 AGVGRVYVKYASPRSAANALKALAGRSFAGRSIIATL 559
>gi|345569109|gb|EGX51978.1| hypothetical protein AOL_s00043g712 [Arthrobotrys oligospora ATCC
24927]
Length = 569
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Query: 75 QDHFEDFYEDLFEELSKYGEIESLNIC----DNLADHMVGNVYVQFREEEHAANALRNLN 130
Q+ +E+ ED+ +E +K+G I + I + A VG +YV+F E E A AL++L
Sbjct: 486 QEEYEEILEDVTDECNKFGPIIDIKIPRPSGNQRAAAGVGKIYVRFEEHESAEKALKSLA 545
Query: 131 GRFYAGRPIIVDF 143
GR +A R +IV +
Sbjct: 546 GRKFADRTVIVSY 558
>gi|407929464|gb|EKG22293.1| hypothetical protein MPH_00360 [Macrophomina phaseolina MS6]
Length = 824
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 12/105 (11%)
Query: 56 DMITPGVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNIC---DNLADHMVGNV 112
+M+TP + +DP++ +E+ ED+ EE SKYG++E L I + VG +
Sbjct: 255 NMVTPE-----ELMDPQE----YEEIQEDVHEECSKYGKVEELKIPRPQPPKENKGVGKI 305
Query: 113 YVQFREEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQY 157
+V++ E A ALR L GR +A R ++V F F C ++
Sbjct: 306 FVKYDTPESAQKALRALAGRKFADRTVVVTFFGEEYFDVDACVKW 350
>gi|224081877|ref|XP_002306512.1| predicted protein [Populus trichocarpa]
gi|222855961|gb|EEE93508.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 59/121 (48%), Gaps = 15/121 (12%)
Query: 40 PSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKIQDHFE-----------DFYEDLFEE 88
P I T + + P + +P +P GQ + +++ F+ D ED+ EE
Sbjct: 243 PIIGQTAIGAAALPAPVLSSPAYEPIGQPSECLMLKNMFDPATETEPDFDLDIKEDVEEE 302
Query: 89 LSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVDFSPVTD 148
SKYG++E + + N G VY++F E AA A R ++ R++A R I+ F P +
Sbjct: 303 CSKYGQVEHIFVDKN----STGCVYLRFGSIEAAAGAQRAMHMRWFARRLILAVFMPTRE 358
Query: 149 F 149
+
Sbjct: 359 Y 359
>gi|225434618|ref|XP_002279321.1| PREDICTED: uncharacterized protein LOC100246760 [Vitis vinifera]
Length = 429
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 47/106 (44%), Gaps = 19/106 (17%)
Query: 84 DLFEELSKYGEIESLNIC-DNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVD 142
DL S+YGEI +N+ D G +V + ++ A+ NLNG GR I VD
Sbjct: 51 DLLAVFSQYGEIVDVNLVRDKGTGKSKGFAFVAYEDQRSTNLAVDNLNGAQILGRIIRVD 110
Query: 143 FSPVTDF--------------REA--TCRQYEENVCNRGGYCNFMH 172
V+++ REA CR ++ CNRG C F H
Sbjct: 111 H--VSNYKKKEEEDEETERQKREARGVCRAFQRGECNRGAGCKFSH 154
>gi|328860245|gb|EGG09351.1| hypothetical protein MELLADRAFT_42536 [Melampsora larici-populina
98AG31]
Length = 304
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 84 DLFEELSKYGEIESLNIC-DNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVD 142
DL E S+YG++E + I D +D G +V R+ + A+ + LNG GRPI VD
Sbjct: 76 DLEAEFSRYGKVEKVVIVYDQRSDRSRGFGFVTMRDVQDASTCISELNGLDLHGRPIRVD 135
Query: 143 FSPVTDFREATCRQY 157
+S T + T QY
Sbjct: 136 YSVTTKPHQPTPGQY 150
>gi|147840589|emb|CAN72715.1| hypothetical protein VITISV_032469 [Vitis vinifera]
Length = 737
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 82/199 (41%), Gaps = 39/199 (19%)
Query: 84 DLFEELSKYGEIESLNIC-DNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVD 142
DL S+YGEI +N+ D G +V + ++ A+ NLNG GR I VD
Sbjct: 51 DLLAVFSQYGEIVDVNLVRDKGTGKSKGFAFVAYEDQRSTNLAVDNLNGAQILGRIIRVD 110
Query: 143 FSPVTDF--------------REA--TCRQYEENVCNRGGYCNFMH------LKKISREL 180
V+++ REA CR ++ CNRG C F H +S+
Sbjct: 111 H--VSNYKKKEEEDEETERQKREARGVCRAFQRGECNRGAGCKFSHDEQDLTFSWLSKSW 168
Query: 181 RRRLFGRSRRRRSRSRSRSRSPHKYRGGYEERSHGGGRGSGRRDDDRDHRLH----GRGR 236
R L G R + S +S R G+ ++ G + GR + +R+H G G
Sbjct: 169 RLVLQGLERASNTGWGSEDKSS---RWGH-DKFQGSTKSDGRPNSIPTNRVHEPTVGEGH 224
Query: 237 R------PRSRSPGRRGGR 249
R SR+ G GGR
Sbjct: 225 RFGNKDARSSRTKGSEGGR 243
>gi|403164040|ref|XP_003324121.2| hypothetical protein PGTG_06023 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375164717|gb|EFP79702.2| hypothetical protein PGTG_06023 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 294
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 54/115 (46%), Gaps = 7/115 (6%)
Query: 50 NMYQRPDMITPGVDPQ--GQALDPRKIQDHFEDFY----EDLFEELSKYGEIESLNIC-D 102
N+ RP + P V P+ Q + P + F DL E S+YG++E + I D
Sbjct: 37 NLRDRPIVSGPPVRPRHAPQDVQPTNVLGVFGLSIRTREADLEAEFSRYGKVEKVVIVYD 96
Query: 103 NLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQY 157
+D G +V R+ + A+ + LNG GRPI VD+S T + T QY
Sbjct: 97 QRSDRSRGFGFVTMRDVQDASACISELNGLDLHGRPIRVDYSVTTKPHQPTPGQY 151
>gi|226532572|ref|NP_001144599.1| uncharacterized protein LOC100277614 [Zea mays]
gi|195644392|gb|ACG41664.1| hypothetical protein [Zea mays]
Length = 165
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/36 (77%), Positives = 29/36 (80%), Gaps = 2/36 (5%)
Query: 247 GGRSR--SPGARRRSPVRESSVERRAKIEQWNREKE 280
GGR R SP R RSPVRESS ERRAKIEQWNRE+E
Sbjct: 127 GGRRRHGSPPRRGRSPVRESSEERRAKIEQWNRERE 162
>gi|297745915|emb|CBI15971.3| unnamed protein product [Vitis vinifera]
Length = 375
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 47/106 (44%), Gaps = 19/106 (17%)
Query: 84 DLFEELSKYGEIESLNIC-DNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVD 142
DL S+YGEI +N+ D G +V + ++ A+ NLNG GR I VD
Sbjct: 51 DLLAVFSQYGEIVDVNLVRDKGTGKSKGFAFVAYEDQRSTNLAVDNLNGAQILGRIIRVD 110
Query: 143 FSPVTDF--------------REA--TCRQYEENVCNRGGYCNFMH 172
V+++ REA CR ++ CNRG C F H
Sbjct: 111 H--VSNYKKKEEEDEETERQKREARGVCRAFQRGECNRGAGCKFSH 154
>gi|310798506|gb|EFQ33399.1| CC1-like family splicing factor [Glomerella graminicola M1.001]
Length = 565
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 59/114 (51%), Gaps = 12/114 (10%)
Query: 36 LHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKIQDHFEDFYEDLFEEL-SKYGE 94
L K P + NM R ++ DP+ + D D ++ +D+ +E +KYG
Sbjct: 450 LKPKTETKPLPVNVNMASRCVVLHNMFDPEEEEGD-----DWVKELEDDVRQEAETKYGR 504
Query: 95 IESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVDFSPVTD 148
+ +++ N G++Y++F + + NA+R LNGR++ GR ++D SPV D
Sbjct: 505 VVHISVDPNSK----GDIYLKFDKVQGGENAIRGLNGRYFGGR--MIDASPVVD 552
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 32/65 (49%)
Query: 77 HFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAG 136
HF +DL +GE+E + + + G +VQ+RE A AL +NG AG
Sbjct: 287 HFNVTEQDLQAVFEPFGELEFVQLQKDDNGRSRGYGFVQYREASQAREALEKMNGFDLAG 346
Query: 137 RPIIV 141
RPI V
Sbjct: 347 RPIRV 351
>gi|413948478|gb|AFW81127.1| hypothetical protein ZEAMMB73_610548, partial [Zea mays]
Length = 108
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 45/82 (54%), Gaps = 22/82 (26%)
Query: 202 PHKYRGGYEER-SHGGGRGSGR--RDDDRDHRLHGRGRRPRSRSPGRRGGRSRSPGARRR 258
P RGG +R G GRG GR R DD R HG SP RRG R
Sbjct: 43 PRAGRGGRHDRYDDGAGRG-GRYERYDDGGRRRHG--------SPPRRG----------R 83
Query: 259 SPVRESSVERRAKIEQWNREKE 280
SPVRESS ERRAKIEQWNRE+E
Sbjct: 84 SPVRESSEERRAKIEQWNRERE 105
>gi|302915553|ref|XP_003051587.1| hypothetical protein NECHADRAFT_68161 [Nectria haematococca mpVI
77-13-4]
gi|256732526|gb|EEU45874.1| hypothetical protein NECHADRAFT_68161 [Nectria haematococca mpVI
77-13-4]
Length = 564
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 59/114 (51%), Gaps = 12/114 (10%)
Query: 36 LHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKIQDHFEDFYEDLFEEL-SKYGE 94
L K P + NM R ++ DP+ + D D ++ +D+ +E S+YG
Sbjct: 449 LKPKMETKPLPMNVNMASRCVVLHNMFDPEEEEGD-----DWVKELEDDVRQEAESRYGH 503
Query: 95 IESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVDFSPVTD 148
+ +++ N G++Y++F + + NA++ LNGR++ GR ++D SPV D
Sbjct: 504 VVHISVDPNSK----GDIYLKFDKVQGGENAIKGLNGRYFGGR--MIDASPVVD 551
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 32/65 (49%)
Query: 77 HFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAG 136
HF +DL +GE+E + + + G +VQFR+ A AL +NG AG
Sbjct: 285 HFNVTEQDLQAVFEPFGELEFVQLQKDENGRSRGYGFVQFRDAGQAREALEKMNGFDLAG 344
Query: 137 RPIIV 141
RPI V
Sbjct: 345 RPIRV 349
>gi|297819328|ref|XP_002877547.1| hypothetical protein ARALYDRAFT_905943 [Arabidopsis lyrata subsp.
lyrata]
gi|297323385|gb|EFH53806.1| hypothetical protein ARALYDRAFT_905943 [Arabidopsis lyrata subsp.
lyrata]
Length = 316
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 44/107 (41%), Gaps = 15/107 (14%)
Query: 84 DLFEELSKYGEIESLNIC-DNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVD 142
DL S+YGEI +N+ D G ++ + ++ A+ NLNG GR I VD
Sbjct: 51 DLLAVFSQYGEIVDVNLIRDKGTGKSKGFAFLAYEDQRSTVLAVDNLNGALVLGRTIKVD 110
Query: 143 F------------SPVTDFREA--TCRQYEENVCNRGGYCNFMHLKK 175
REA CR ++ C RG C F H +K
Sbjct: 111 HCREYKKHEEEDEETRRQNREARGVCRAFQRGECTRGDSCKFSHDEK 157
>gi|380478594|emb|CCF43506.1| CC1-like family splicing factor [Colletotrichum higginsianum]
Length = 565
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 59/114 (51%), Gaps = 12/114 (10%)
Query: 36 LHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKIQDHFEDFYEDLFEEL-SKYGE 94
L K P + NM R ++ DP+ + D + ++ +D+ +E +KYG
Sbjct: 450 LKPKTETKPLPVNVNMASRCVVLHNMFDPEEEEGD-----EWVKELEDDVRQEAETKYGR 504
Query: 95 IESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVDFSPVTD 148
+ +++ N G++Y++F + + NA+R LNGR++ GR ++D SPV D
Sbjct: 505 VVHISVDPNSK----GDIYLKFDKVQGGENAIRGLNGRYFGGR--MIDASPVVD 552
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 32/65 (49%)
Query: 77 HFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAG 136
HF +DL +GE+E + + + G +VQ+RE A AL +NG AG
Sbjct: 287 HFNVTEQDLQAVFEPFGELEFVQLQKDDNGRSRGYGFVQYREASQAREALEKMNGFDLAG 346
Query: 137 RPIIV 141
RPI V
Sbjct: 347 RPIRV 351
>gi|157818333|ref|NP_001101729.1| HIV-1 Tat specific factor 1 [Rattus norvegicus]
gi|149015808|gb|EDL75132.1| HIV TAT specific factor 1 (predicted) [Rattus norvegicus]
Length = 776
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 63/136 (46%), Gaps = 8/136 (5%)
Query: 83 EDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVD 142
EDL E SK+G+I L + D H G V FRE E A N ++ L+GR++ GR I
Sbjct: 289 EDLRVECSKFGQIRKLLLFDR---HPDGVASVSFREPEEADNCIQTLDGRWFGGRQITAQ 345
Query: 143 -FSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRR--RLFGRSRRRRSRSRSRS 199
+ TD++ E G+ F++ + +R L+R + G R SR R S
Sbjct: 346 AWDGTTDYQ--VEETSREREERLRGWEAFLNAPEANRGLQRMDSICGSERPGPSRVRHFS 403
Query: 200 RSPHKYRGGYEERSHG 215
P G +E + G
Sbjct: 404 EHPSMSNMGAQEATTG 419
>gi|346972403|gb|EGY15855.1| RNA-binding protein rsd1 [Verticillium dahliae VdLs.17]
Length = 570
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 62/124 (50%), Gaps = 12/124 (9%)
Query: 26 ACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKIQDHFEDFYEDL 85
A D L K P + NM R ++ DP+ + + +D ++ +D+
Sbjct: 445 ASNAVDERQTLKPKTETKPLPVNVNMASRCVVLHNMFDPEEE-----EGEDWAKELEDDV 499
Query: 86 FEEL-SKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVDFS 144
+E SKYG + +++ N G++Y++F + + NA++ LNGR++ GR ++D S
Sbjct: 500 RQEAESKYGRVVHISVDPNSK----GDIYLKFDKVQGGENAIKGLNGRYFGGR--MIDAS 553
Query: 145 PVTD 148
PV D
Sbjct: 554 PVVD 557
>gi|449454219|ref|XP_004144853.1| PREDICTED: RNA-binding protein 39-like [Cucumis sativus]
gi|449506986|ref|XP_004162902.1| PREDICTED: RNA-binding protein 39-like [Cucumis sativus]
Length = 562
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 21/108 (19%)
Query: 43 SPTLLLSNMYQRPDMITPGVDPQGQALDPRKIQDHFE-DFYEDLFEELSKYGEIESLNIC 101
S LLL NM+ DP ++ + F+ D +D+ EE S++G+++ + +
Sbjct: 467 SECLLLKNMF----------DPTAES------EPTFDLDIRDDVEEECSRFGKLKHIYVD 510
Query: 102 DNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVDFSPVTDF 149
N A G VY++F + E A A R LNGR++AG+ I F + +
Sbjct: 511 RNSA----GFVYLRFEKSESAMEAQRALNGRWFAGKMIGATFMDIPSY 554
>gi|344297715|ref|XP_003420542.1| PREDICTED: HIV Tat-specific factor 1 homolog [Loxodonta africana]
Length = 743
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 57/122 (46%), Gaps = 6/122 (4%)
Query: 83 EDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVD 142
EDL E SK+G+I+ L + D H G V FR+ E A + L+GR++ GR I +
Sbjct: 289 EDLRVECSKFGQIKKLILFDR---HPDGVASVSFRDPEEADYCIHTLDGRWFGGRQITAE 345
Query: 143 -FSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRRRRSRSRSRSRS 201
+ TD++ + E G+ F++ + +R RR + R SR R S
Sbjct: 346 AWDGTTDYQVEETTREREERLR--GWEAFLNEPEANRGFRRSNLASASERAGPSRVRHFS 403
Query: 202 PH 203
H
Sbjct: 404 EH 405
>gi|357490653|ref|XP_003615614.1| RNA binding domain protein [Medicago truncatula]
gi|355516949|gb|AES98572.1| RNA binding domain protein [Medicago truncatula]
Length = 393
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 46/109 (42%), Gaps = 16/109 (14%)
Query: 80 DFYE-DLFEELSKYGEIESLNIC-DNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGR 137
DF E D+ ++YGE+ +N+ D G ++ + ++ A+ NLNG +GR
Sbjct: 46 DFTEGDVIAVFAQYGEVVDINLVRDKGTGKSKGFAFIAYEDQRSTNLAVDNLNGAQVSGR 105
Query: 138 PIIVDF------------SPVTDFREA--TCRQYEENVCNRGGYCNFMH 172
I VD REA CR ++ C RG C F H
Sbjct: 106 IIRVDHVDKYKKMEEEDEEEAKQKREARGVCRAFQRGECTRGAGCKFSH 154
>gi|86438143|gb|AAI12691.1| HTATSF1 protein [Bos taurus]
Length = 524
Score = 45.1 bits (105), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 58/122 (47%), Gaps = 6/122 (4%)
Query: 83 EDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVD 142
EDL E SK+G+I L + D H G V FR+ E A ++ LNGR++ GR I
Sbjct: 289 EDLRVECSKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLNGRWFGGRQITAQ 345
Query: 143 -FSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRRRRSRSRSRSRS 201
+ TD++ + E G+ F++ + +R L+R R+ R SR R S
Sbjct: 346 AWDGTTDYQVEETTREREERMR--GWEAFLNAPEANRGLQRSNSIRAPERAGPSRVRHFS 403
Query: 202 PH 203
H
Sbjct: 404 EH 405
>gi|330340363|ref|NP_001193343.1| HIV Tat-specific factor 1 [Bos taurus]
Length = 773
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 58/122 (47%), Gaps = 6/122 (4%)
Query: 83 EDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVD 142
EDL E SK+G+I L + D H G V FR+ E A ++ LNGR++ GR I
Sbjct: 289 EDLRVECSKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLNGRWFGGRQITAQ 345
Query: 143 -FSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRRRRSRSRSRSRS 201
+ TD++ + E G+ F++ + +R L+R R+ R SR R S
Sbjct: 346 AWDGTTDYQVEETTREREERLR--GWEAFLNAPEANRGLQRSNSIRAPERAGPSRVRHFS 403
Query: 202 PH 203
H
Sbjct: 404 EH 405
>gi|348557907|ref|XP_003464760.1| PREDICTED: LOW QUALITY PROTEIN: HIV Tat-specific factor 1 homolog
[Cavia porcellus]
Length = 752
Score = 44.7 bits (104), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 64/136 (47%), Gaps = 8/136 (5%)
Query: 83 EDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVD 142
EDL E +K+G+I+ L + D H G V FR+ E A + ++ L+GR++ GR I
Sbjct: 289 EDLRVECAKFGQIKKLLLFDR---HPDGVASVSFRDAEEADHCIQTLDGRWFGGRQITAQ 345
Query: 143 -FSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRR--RLFGRSRRRRSRSRSRS 199
+ TD++ + E G+ F++ + +R L+R + SR+R S
Sbjct: 346 AWDGTTDYQVEETSREREERLK--GWEAFLNAPEANRSLQRSDSVSASEMAGPSRARHFS 403
Query: 200 RSPHKYRGGYEERSHG 215
P ++ +E G
Sbjct: 404 EPPSTWKMNAQEAETG 419
>gi|429860108|gb|ELA34858.1| RNA splicing factor (pad-1) [Colletotrichum gloeosporioides Nara
gc5]
Length = 628
Score = 44.3 bits (103), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 60/124 (48%), Gaps = 12/124 (9%)
Query: 26 ACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKIQDHFEDFYEDL 85
A D L K I P + +M R ++ DP+ + D D ++ +D+
Sbjct: 446 ASNGADERQVLKPKTEIKPLPVNVSMASRCVVLHNMFDPEEEDGD-----DWAKELEDDV 500
Query: 86 FEELSK-YGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVDFS 144
+E K YG + + + N G++Y++F + + NA+R LNGR++ GR ++D S
Sbjct: 501 RQEAEKKYGRVVHIAVDPNSK----GDIYLKFDKVQGGENAIRGLNGRYFGGR--MIDAS 554
Query: 145 PVTD 148
PV D
Sbjct: 555 PVVD 558
Score = 37.7 bits (86), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 32/65 (49%)
Query: 77 HFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAG 136
HF +DL +GE+E + + + G +VQ+RE A AL +NG AG
Sbjct: 293 HFNVTEQDLQAVFEPFGELEFVQLQKDDNGRSRGYGFVQYREASQAREALEKMNGFDLAG 352
Query: 137 RPIIV 141
RPI V
Sbjct: 353 RPIRV 357
>gi|12847222|dbj|BAB27483.1| unnamed protein product [Mus musculus]
Length = 561
Score = 44.3 bits (103), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 62/136 (45%), Gaps = 8/136 (5%)
Query: 83 EDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVD 142
EDL E SK+G+I L + D H G V FRE E A + ++ L+GR++ GR I
Sbjct: 290 EDLRVECSKFGQIRKLLLFDR---HPDGVASVSFREPEEADHCIQTLDGRWFGGRQITAQ 346
Query: 143 -FSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRR--LFGRSRRRRSRSRSRS 199
+ TD++ E G+ F++ + SR LRR + G R SR R S
Sbjct: 347 AWDGTTDYQ--VEETSREREERLRGWEAFLNAPEASRGLRRMDSIAGSERPGPSRMRHFS 404
Query: 200 RSPHKYRGGYEERSHG 215
P +E + G
Sbjct: 405 EHPSMSNMKAQEATTG 420
>gi|426257498|ref|XP_004022363.1| PREDICTED: HIV Tat-specific factor 1 homolog [Ovis aries]
Length = 774
Score = 43.9 bits (102), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 58/122 (47%), Gaps = 6/122 (4%)
Query: 83 EDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVD 142
EDL E SK+G+I L + D H G V F++ E A ++ LNGR++ GR I
Sbjct: 289 EDLRVECSKFGQIRKLLLFDR---HPDGVASVSFKDPEEADYCIQTLNGRWFGGRQITAQ 345
Query: 143 -FSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRRRRSRSRSRSRS 201
+ TD++ + E G+ F++ + +R L+R R+ R SR R S
Sbjct: 346 AWDGTTDYQVEETTREREERLR--GWEAFLNAPEANRGLQRSNSIRAPERAGPSRVRHFS 403
Query: 202 PH 203
H
Sbjct: 404 EH 405
>gi|293334639|ref|NP_001169755.1| uncharacterized protein LOC100383636 [Zea mays]
gi|224031469|gb|ACN34810.1| unknown [Zea mays]
gi|414887660|tpg|DAA63674.1| TPA: hypothetical protein ZEAMMB73_707044 [Zea mays]
gi|414887661|tpg|DAA63675.1| TPA: hypothetical protein ZEAMMB73_707044 [Zea mays]
Length = 246
Score = 43.9 bits (102), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 78 FEDFYEDLFEELSKYGEIESLNIC-DNLADHMVGNVYVQFREEEHAANALRNLNGRFYAG 136
F +DLF KYGEI + I D G +V+++ E+ A A+ L+GR G
Sbjct: 26 FRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGFAFVRYKYEDEAQKAVERLDGRLVDG 85
Query: 137 RPIIVDFS 144
R I+V F+
Sbjct: 86 REIMVQFA 93
>gi|148710216|gb|EDL42162.1| HIV TAT specific factor 1, isoform CRA_b [Mus musculus]
Length = 793
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 62/136 (45%), Gaps = 8/136 (5%)
Query: 83 EDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVD 142
EDL E SK+G+I L + D H G V FRE E A + ++ L+GR++ GR I
Sbjct: 326 EDLRVECSKFGQIRKLLLFDR---HPDGVASVSFREPEEADHCIQTLDGRWFGGRQITAQ 382
Query: 143 -FSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRR--RLFGRSRRRRSRSRSRS 199
+ TD++ E G+ F++ + SR LRR + G R SR R S
Sbjct: 383 AWDGTTDYQ--VEETSREREERLRGWEAFLNAPEASRGLRRMDSIAGSERPGPSRMRHFS 440
Query: 200 RSPHKYRGGYEERSHG 215
P +E + G
Sbjct: 441 EHPSMSNMKAQEATTG 456
>gi|23956212|ref|NP_082518.1| HIV Tat-specific factor 1 homolog [Mus musculus]
gi|321267528|ref|NP_083647.1| HIV Tat-specific factor 1 homolog [Mus musculus]
gi|81913100|sp|Q8BGC0.1|HTSF1_MOUSE RecName: Full=HIV Tat-specific factor 1 homolog
gi|22902415|gb|AAH37711.1| HIV TAT specific factor 1 [Mus musculus]
gi|26340228|dbj|BAC33777.1| unnamed protein product [Mus musculus]
gi|148710215|gb|EDL42161.1| HIV TAT specific factor 1, isoform CRA_a [Mus musculus]
Length = 757
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 62/136 (45%), Gaps = 8/136 (5%)
Query: 83 EDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVD 142
EDL E SK+G+I L + D H G V FRE E A + ++ L+GR++ GR I
Sbjct: 290 EDLRVECSKFGQIRKLLLFDR---HPDGVASVSFREPEEADHCIQTLDGRWFGGRQITAQ 346
Query: 143 -FSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRR--RLFGRSRRRRSRSRSRS 199
+ TD++ E G+ F++ + SR LRR + G R SR R S
Sbjct: 347 AWDGTTDYQ--VEETSREREERLRGWEAFLNAPEASRGLRRMDSIAGSERPGPSRMRHFS 404
Query: 200 RSPHKYRGGYEERSHG 215
P +E + G
Sbjct: 405 EHPSMSNMKAQEATTG 420
>gi|406700649|gb|EKD03814.1| RRM protein [Trichosporon asahii var. asahii CBS 8904]
Length = 423
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 84 DLFEELSKYGEIESLNIC-DNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVD 142
DL +E S++G++E + I D D G ++ R E A + LNG GR I VD
Sbjct: 191 DLEDEFSRFGDVEKVVIVYDQRTDRSRGFGFITMRSTEDATRCIEKLNGIVLHGRAIRVD 250
Query: 143 FSPVTDFREATCRQY 157
+S T +Y
Sbjct: 251 YSATNKAHAPTPGEY 265
>gi|256091162|ref|XP_002581498.1| hypothetical protein [Schistosoma mansoni]
Length = 60
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/24 (75%), Positives = 21/24 (87%)
Query: 162 CNRGGYCNFMHLKKISRELRRRLF 185
C RGG+CNFMHLK ISREL R+L+
Sbjct: 2 CTRGGFCNFMHLKPISRELCRKLY 25
>gi|452984713|gb|EME84470.1| hypothetical protein MYCFIDRAFT_203037 [Pseudocercospora fijiensis
CIRAD86]
Length = 343
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 44/101 (43%)
Query: 61 GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
G DP+ R H+E +DL E + G S+ + + D G YV + +E
Sbjct: 91 GRDPESTGSKLRVDNIHYELTEDDLRELFERVGPTLSVRLLYDRQDRSQGTAYVIYEDER 150
Query: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENV 161
A +AL +G+ G+PI + P R+A R + +
Sbjct: 151 DARDALHKFDGQNANGQPIRISLMPSGPSRDAPPRGIADRI 191
>gi|401882602|gb|EJT46854.1| hypothetical protein A1Q1_04405 [Trichosporon asahii var. asahii
CBS 2479]
Length = 392
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 84 DLFEELSKYGEIESLNIC-DNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVD 142
DL +E S++G++E + I D D G ++ R E A + LNG GR I VD
Sbjct: 191 DLEDEFSRFGDVEKVVIVYDQRTDRSRGFGFITMRSTEDATRCIEKLNGIVLHGRAIRVD 250
Query: 143 FSPVTDFREATCRQY 157
+S T +Y
Sbjct: 251 YSATNKAHAPTPGEY 265
>gi|296481686|tpg|DAA23801.1| TPA: HIV-1 Tat specific factor 1-like [Bos taurus]
Length = 766
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 55/122 (45%), Gaps = 6/122 (4%)
Query: 83 EDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVD 142
EDL E SK+G+I L + D H G V FR E A ++ LNGR++ GR I
Sbjct: 289 EDLRVECSKFGQIRKLLLFDR---HPDGVASVSFRSPEEADYCIQTLNGRWFGGRQITAQ 345
Query: 143 -FSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRRRRSRSRSRSRS 201
+ TD + E G+ F++ + +R L+R R+ R SR R S
Sbjct: 346 AWDGTTDCQVEETTSEREERLR--GWEAFLNAPEANRGLQRSDSIRAPERAGSSRVRHFS 403
Query: 202 PH 203
H
Sbjct: 404 EH 405
>gi|148710217|gb|EDL42163.1| HIV TAT specific factor 1, isoform CRA_c [Mus musculus]
Length = 464
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 62/136 (45%), Gaps = 8/136 (5%)
Query: 83 EDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVD 142
EDL E SK+G+I L + D H G V FRE E A + ++ L+GR++ GR I
Sbjct: 193 EDLRVECSKFGQIRKLLLFDR---HPDGVASVSFREPEEADHCIQTLDGRWFGGRQITAQ 249
Query: 143 -FSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRR--LFGRSRRRRSRSRSRS 199
+ TD++ E G+ F++ + SR LRR + G R SR R S
Sbjct: 250 AWDGTTDYQ--VEETSREREERLRGWEAFLNAPEASRGLRRMDSIAGSERPGPSRMRHFS 307
Query: 200 RSPHKYRGGYEERSHG 215
P +E + G
Sbjct: 308 EHPSMSNMKAQEATTG 323
>gi|307109776|gb|EFN58013.1| hypothetical protein CHLNCDRAFT_57088 [Chlorella variabilis]
Length = 546
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 46/98 (46%), Gaps = 19/98 (19%)
Query: 46 LLLSNMYQRPDMITPGVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLA 105
LLL NM+ DP + D + + ED+ E KYG +E + + N
Sbjct: 456 LLLKNMF----------DPAEETAD-----NWDAEIAEDVGSECQKYGPVEHVFVDRN-- 498
Query: 106 DHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVDF 143
G VYV+F AANA R L+GR++A R I DF
Sbjct: 499 --SRGFVYVKFTAISSAANAQRALHGRWFAARQIAADF 534
>gi|156404394|ref|XP_001640392.1| predicted protein [Nematostella vectensis]
gi|156227526|gb|EDO48329.1| predicted protein [Nematostella vectensis]
Length = 332
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
Query: 76 DHFEDFYEDLFEELSKYGEIESLNICDNLADHM----VGNVYVQFREEEHAANALRNLNG 131
+ FE+ Y+D+ EE SKYG ++S+ I + M VG ++V+F + A A L G
Sbjct: 249 EEFEEIYDDVREECSKYGRVKSMEIPRPMEGLMEPPGVGKIFVEFSSIDDAKKAAAALGG 308
Query: 132 RFYAGRPIIVDFSP 145
R +A R ++ + P
Sbjct: 309 RKFANRVVVTSYYP 322
>gi|226530532|ref|NP_001140562.1| uncharacterized protein LOC100272627 [Zea mays]
gi|194699996|gb|ACF84082.1| unknown [Zea mays]
gi|414590932|tpg|DAA41503.1| TPA: hypothetical protein ZEAMMB73_776046 [Zea mays]
Length = 251
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 78 FEDFYEDLFEELSKYGEIESLNIC-DNLADHMVGNVYVQFREEEHAANALRNLNGRFYAG 136
F +DLF KYGEI + I D G +V+++ E+ A A+ L+GR G
Sbjct: 26 FRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGFAFVRYKYEDEAQKAVDRLDGRLVDG 85
Query: 137 RPIIVDFS 144
R I+V F+
Sbjct: 86 REIMVQFA 93
>gi|414887662|tpg|DAA63676.1| TPA: hypothetical protein ZEAMMB73_707044 [Zea mays]
Length = 207
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 78 FEDFYEDLFEELSKYGEIESLNIC-DNLADHMVGNVYVQFREEEHAANALRNLNGRFYAG 136
F +DLF KYGEI + I D G +V+++ E+ A A+ L+GR G
Sbjct: 26 FRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGFAFVRYKYEDEAQKAVERLDGRLVDG 85
Query: 137 RPIIVDFS 144
R I+V F+
Sbjct: 86 REIMVQFA 93
>gi|194708586|gb|ACF88377.1| unknown [Zea mays]
gi|414590930|tpg|DAA41501.1| TPA: hypothetical protein ZEAMMB73_776046 [Zea mays]
gi|414590931|tpg|DAA41502.1| TPA: hypothetical protein ZEAMMB73_776046 [Zea mays]
Length = 238
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 78 FEDFYEDLFEELSKYGEIESLNIC-DNLADHMVGNVYVQFREEEHAANALRNLNGRFYAG 136
F +DLF KYGEI + I D G +V+++ E+ A A+ L+GR G
Sbjct: 26 FRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGFAFVRYKYEDEAQKAVDRLDGRLVDG 85
Query: 137 RPIIVDFS 144
R I+V F+
Sbjct: 86 REIMVQFA 93
>gi|301118214|ref|XP_002906835.1| splicing factor, arginine/serine-rich, putative [Phytophthora
infestans T30-4]
gi|262108184|gb|EEY66236.1| splicing factor, arginine/serine-rich, putative [Phytophthora
infestans T30-4]
Length = 233
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 83 EDLFEELSKYGEIESLNIC-DNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIV 141
ED+ +E +YGE+ + I D G +V+FR E A +A RNL+G GR I V
Sbjct: 21 EDIRKEFERYGEVRDVYIPKDFYTKEPKGFAFVEFRSEREAEDARRNLDGVRIDGRDIRV 80
Query: 142 DFS 144
F+
Sbjct: 81 VFA 83
>gi|383415877|gb|AFH31152.1| serine/arginine-rich splicing factor 12 [Macaca mulatta]
Length = 261
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 83 EDLFEELSKYGEIESLNI-CDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIV 141
EDL E +YG I + I D G YVQF + A +AL NLN ++ GR I +
Sbjct: 24 EDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFEDVREAEDALYNLNRKWVCGRQIEI 83
Query: 142 DFS 144
F+
Sbjct: 84 QFA 86
>gi|324508128|gb|ADY43435.1| RNA-binding protein 39 [Ascaris suum]
Length = 535
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 79 EDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRP 138
ED +FE +G+I++L I +L+ G YV FR + A A+ +NG AGRP
Sbjct: 282 EDMLRRIFE---PFGKIDTLEIATDLSGVSKGYAYVTFRHADDAKRAMEQMNGFELAGRP 338
Query: 139 IIV 141
+ V
Sbjct: 339 MKV 341
>gi|324507842|gb|ADY43315.1| RNA-binding protein 39 [Ascaris suum]
Length = 618
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 79 EDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRP 138
ED +FE +G+I++L I +L+ G YV FR + A A+ +NG AGRP
Sbjct: 365 EDMLRRIFE---PFGKIDTLEIATDLSGVSKGYAYVTFRHADDAKRAMEQMNGFELAGRP 421
Query: 139 IIV 141
+ V
Sbjct: 422 MKV 424
>gi|301769097|ref|XP_002919964.1| PREDICTED: HIV Tat-specific factor 1 homolog [Ailuropoda
melanoleuca]
Length = 767
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 57/122 (46%), Gaps = 6/122 (4%)
Query: 83 EDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVD 142
EDL E SK+G+I L + D H G V FR+ E A ++ L+GR++ GR I
Sbjct: 289 EDLRVECSKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQ 345
Query: 143 -FSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRRRRSRSRSRSRS 201
+ TD++ + E G+ F++ + +R LRR + R SR R S
Sbjct: 346 AWDGATDYQVEETTREREERLR--GWEAFLNAPEANRGLRRLNSVCASERAGPSRVRHFS 403
Query: 202 PH 203
H
Sbjct: 404 EH 405
>gi|354475309|ref|XP_003499872.1| PREDICTED: HIV Tat-specific factor 1 homolog [Cricetulus griseus]
Length = 714
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 83 EDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVD 142
EDL E +K+G+I+ L + D H G V FRE E A ++ L+GR++ GR I +
Sbjct: 216 EDLRVECAKFGQIKKLLLFDR---HPDGVASVSFREPEEADYCIQTLDGRWFGGRQITAE 272
Query: 143 -FSPVTDFR 150
+ TD++
Sbjct: 273 AWDGTTDYQ 281
>gi|208973274|ref|NP_001129183.1| 35 kDa SR repressor protein [Rattus norvegicus]
Length = 261
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 83 EDLFEELSKYGEIESLNI-CDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIV 141
EDL E +YG I + I D + G YVQF + A +AL NLN ++ GR I +
Sbjct: 24 EDLRREFGRYGPIVDVYIPLDFYSRRPRGFAYVQFEDVRDAEDALYNLNRKWVCGRQIEI 83
Query: 142 DFS 144
F+
Sbjct: 84 QFA 86
>gi|291510230|gb|ADE10071.1| RRM [Tremella fuciformis]
Length = 326
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 84 DLFEELSKYGEIESLNIC-DNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVD 142
DL +E ++YGE+E + I D D G ++ R E A + LNG GR + VD
Sbjct: 134 DLEDEFARYGEVEKVVIVYDQRTDRSRGFGFITMRTVEDAQLCVEKLNGLLLHGRAVRVD 193
Query: 143 FS 144
FS
Sbjct: 194 FS 195
>gi|407918973|gb|EKG12232.1| hypothetical protein MPH_10639 [Macrophomina phaseolina MS6]
Length = 602
Score = 41.6 bits (96), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 7/72 (9%)
Query: 78 FEDFYEDLFEEL-SKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAG 136
++ +D+ EE +KYG + + + N G++YV+F + NA++ LNGRF+ G
Sbjct: 526 MKELEDDVKEECQAKYGTVVHIALDPNTQ----GDIYVKFDTVQGGENAIKGLNGRFFGG 581
Query: 137 RPIIVDFSPVTD 148
R I PV D
Sbjct: 582 RQITA--QPVVD 591
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 30/65 (46%)
Query: 77 HFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAG 136
HF DL +GE+E + + G +VQFR+ A AL +NG AG
Sbjct: 317 HFSITESDLQNVFEPFGELEFVQLQKEEGGRSRGYGFVQFRDPAQAKEALEKMNGFDLAG 376
Query: 137 RPIIV 141
RPI V
Sbjct: 377 RPIRV 381
>gi|115456325|ref|NP_001051763.1| Os03g0826400 [Oryza sativa Japonica Group]
gi|122246709|sp|Q10B98.1|C3H25_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 25;
Short=OsC3H25
gi|15042832|gb|AAK82455.1|AC091247_22 putative RNA binding protein [Oryza sativa Japonica Group]
gi|18855068|gb|AAL79760.1|AC096687_24 putative small nuclear ribonucleoprotein [Oryza sativa Japonica
Group]
gi|108711850|gb|ABF99645.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113550234|dbj|BAF13677.1| Os03g0826400 [Oryza sativa Japonica Group]
gi|125588469|gb|EAZ29133.1| hypothetical protein OsJ_13196 [Oryza sativa Japonica Group]
Length = 312
Score = 41.6 bits (96), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 44/104 (42%), Gaps = 15/104 (14%)
Query: 84 DLFEELSKYGEIESLNIC-DNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVD 142
DL ++YGE+ +N+ D G ++ + ++ A+ NLNG GR + VD
Sbjct: 51 DLLAVFAQYGEVVDVNLVRDKGTGKSKGFAFLAYEDQRSTILAVDNLNGAKVLGRIVRVD 110
Query: 143 F------------SPVTDFREA--TCRQYEENVCNRGGYCNFMH 172
+ REA C +++ CNRG C + H
Sbjct: 111 HVSKYKKKEEEDEEELQKKREARGVCYAFQKGECNRGASCRYSH 154
>gi|353241625|emb|CCA73428.1| related to NSR1-nuclear localization sequence binding protein
[Piriformospora indica DSM 11827]
Length = 657
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 85 LFEELSKYGEIESLNI-CDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVDF 143
L+E ++G+I S+ + D M G YV+F E+A +A LNG+ AGR I +DF
Sbjct: 506 LWETFGEHGDIVSVRLPTDRETGQMKGFGYVEFTSVENAKSAFNALNGKDIAGRNIRLDF 565
Query: 144 S 144
S
Sbjct: 566 S 566
>gi|307219223|ref|NP_001182527.1| splicing factor, arginine/serine-rich 13B [Sus scrofa]
Length = 261
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 83 EDLFEELSKYGEIESLNI-CDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIV 141
EDL E +YG I + I D G YVQF + A +AL NLN ++ GR I +
Sbjct: 24 EDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFEDVRDAEDALYNLNRKWVCGRQIEI 83
Query: 142 DFS 144
F+
Sbjct: 84 QFA 86
>gi|148612890|ref|NP_542781.3| serine/arginine-rich splicing factor 12 [Homo sapiens]
gi|47606193|sp|Q8WXF0.1|SRS12_HUMAN RecName: Full=Serine/arginine-rich splicing factor 12; AltName:
Full=35 kDa SR repressor protein; Short=SRrp35; AltName:
Full=Splicing factor, arginine/serine-rich 13B; AltName:
Full=Splicing factor, arginine/serine-rich 19
gi|18034491|gb|AAL57515.1|AF449428_1 SRrp35 [Homo sapiens]
gi|189054199|dbj|BAG36719.1| unnamed protein product [Homo sapiens]
gi|261859278|dbj|BAI46161.1| 35 kDa SR repressor protein [synthetic construct]
gi|380809714|gb|AFE76732.1| serine/arginine-rich splicing factor 12 [Macaca mulatta]
gi|384945376|gb|AFI36293.1| serine/arginine-rich splicing factor 12 [Macaca mulatta]
Length = 261
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 83 EDLFEELSKYGEIESLNI-CDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIV 141
EDL E +YG I + I D G YVQF + A +AL NLN ++ GR I +
Sbjct: 24 EDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFEDVRDAEDALYNLNRKWVCGRQIEI 83
Query: 142 DFS 144
F+
Sbjct: 84 QFA 86
>gi|393215487|gb|EJD00978.1| RNA-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 247
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 84 DLFEELSKYGEIESLNIC-DNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVD 142
DL EE S++G +E + I D +D G +++ E AA ++ LNG GR I VD
Sbjct: 49 DLDEEFSRFGRVEKVTIVYDQRSDRSRGFGFIKLASVEDAARCIQELNGVELNGRRIRVD 108
Query: 143 FS 144
+S
Sbjct: 109 YS 110
>gi|354466061|ref|XP_003495494.1| PREDICTED: serine/arginine-rich splicing factor 12-like, partial
[Cricetulus griseus]
Length = 249
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 83 EDLFEELSKYGEIESLNI-CDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIV 141
EDL E +YG I + I D G YVQF + A +AL NLN ++ GR I +
Sbjct: 12 EDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFEDVRDAEDALYNLNRKWVCGRQIEI 71
Query: 142 DFS 144
F+
Sbjct: 72 QFA 74
>gi|344247059|gb|EGW03163.1| HIV Tat-specific factor 1-like [Cricetulus griseus]
Length = 528
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 83 EDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVD 142
EDL E +K+G+I+ L + D H G V FRE E A ++ L+GR++ GR I +
Sbjct: 30 EDLRVECAKFGQIKKLLLFDR---HPDGVASVSFREPEEADYCIQTLDGRWFGGRQITAE 86
Query: 143 -FSPVTDFR 150
+ TD++
Sbjct: 87 AWDGTTDYQ 95
>gi|410989518|ref|XP_004001008.1| PREDICTED: HIV Tat-specific factor 1 homolog [Felis catus]
Length = 780
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 57/122 (46%), Gaps = 6/122 (4%)
Query: 83 EDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVD 142
EDL E +K+G+I L + D H G V FR+ E A ++ L+GR++ GR I
Sbjct: 303 EDLRVECAKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQ 359
Query: 143 -FSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRRRRSRSRSRSRS 201
+ TD++ + E G+ F++ + +R LRR + R SR R S
Sbjct: 360 AWDGTTDYQVEETTREREERLR--GWEAFLNAPEANRGLRRSNSVCASERAGPSRVRHFS 417
Query: 202 PH 203
H
Sbjct: 418 EH 419
>gi|431891353|gb|ELK02229.1| HIV Tat-specific factor 1 like protein [Pteropus alecto]
Length = 786
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 57/122 (46%), Gaps = 6/122 (4%)
Query: 83 EDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVD 142
EDL E SK+G+I L + D H G V FR+ E A ++ L+GR++ GR I
Sbjct: 288 EDLRVECSKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQ 344
Query: 143 -FSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRRRRSRSRSRSRS 201
+ TD++ + E G+ F++ + ++ LRR + R SR R S
Sbjct: 345 VWDGTTDYQVEETTREREERLK--GWEAFLNAPEANKGLRRSNSICASERAGPSRIRHFS 402
Query: 202 PH 203
H
Sbjct: 403 EH 404
>gi|345807273|ref|XP_538183.3| PREDICTED: HIV Tat-specific factor 1 homolog [Canis lupus
familiaris]
Length = 768
Score = 41.2 bits (95), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 6/101 (5%)
Query: 83 EDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVD 142
EDL E SK+G+I L + D H G V FR+ E A ++ L+GR++ GR I
Sbjct: 289 EDLRVECSKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQ 345
Query: 143 -FSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRR 182
+ TD++ + E G+ F++ + +R LRR
Sbjct: 346 AWDGTTDYQVEETTREREERLR--GWEAFLNAPEANRSLRR 384
>gi|410445335|gb|ADB77883.2| Rbmy [Bos taurus]
Length = 387
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Query: 83 EDLFEELSKYGEI-ESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIV 141
E L E KYG I E L I D + G ++ F A +A + +NG+F G+ I V
Sbjct: 21 ESLEAEFGKYGHIVEVLLIKDRNTNKSRGFAFITFESPADAKDAAKEMNGKFLDGKTIKV 80
Query: 142 DFSPVTDFREATCRQYEENVCNRG 165
+ + F ++ + NRG
Sbjct: 81 EQANKPSFESGGRQKLQPPARNRG 104
>gi|395860822|ref|XP_003802703.1| PREDICTED: HIV Tat-specific factor 1 homolog [Otolemur garnettii]
Length = 767
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 83 EDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVD 142
EDL E SK+G+I L + D H G V FR+ E A + LNGR++ GR I +
Sbjct: 289 EDLRVECSKFGQIRKLLLFDR---HPDGVASVSFRDAEEADYCIHTLNGRWFGGRQITAE 345
Query: 143 -FSPVTDFR 150
+ TD++
Sbjct: 346 AWDGTTDYQ 354
>gi|332246954|ref|XP_003272619.1| PREDICTED: HIV Tat-specific factor 1 homolog isoform 1 [Nomascus
leucogenys]
Length = 754
Score = 41.2 bits (95), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 57/122 (46%), Gaps = 6/122 (4%)
Query: 83 EDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVD 142
EDL E SK+G+I L + D H G V FR+ E A ++ L+GR++ GR I
Sbjct: 289 EDLRVECSKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQ 345
Query: 143 -FSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRRRRSRSRSRSRS 201
+ TD++ E G+ F++ + +R LRR + R SR+R S
Sbjct: 346 AWDGTTDYQ--VEETSREREERLRGWEAFLNAPEANRGLRRSDSVSASERAGPSRARHFS 403
Query: 202 PH 203
H
Sbjct: 404 EH 405
>gi|452842907|gb|EME44842.1| hypothetical protein DOTSEDRAFT_70785 [Dothistroma septosporum
NZE10]
Length = 337
Score = 41.2 bits (95), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 34/69 (49%)
Query: 77 HFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAG 136
H+E EDL + + G S+ + + AD +G YV + + A A+ + NG+ G
Sbjct: 108 HYELTEEDLRDLFERIGPTTSVRLLYDRADRSLGTAYVIYEDPRDARQAVDDFNGQMANG 167
Query: 137 RPIIVDFSP 145
+PI + P
Sbjct: 168 QPIRLQLMP 176
>gi|297304889|ref|XP_001082302.2| PREDICTED: HIV Tat-specific factor 1 homolog isoform 1 [Macaca
mulatta]
gi|355705198|gb|EHH31123.1| hypothetical protein EGK_20983 [Macaca mulatta]
Length = 754
Score = 41.2 bits (95), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 57/122 (46%), Gaps = 6/122 (4%)
Query: 83 EDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVD 142
EDL E SK+G+I L + D H G V FR+ E A ++ L+GR++ GR I
Sbjct: 289 EDLRVECSKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQ 345
Query: 143 -FSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRRRRSRSRSRSRS 201
+ TD++ E G+ F++ + +R LRR + R SR+R S
Sbjct: 346 AWDGTTDYQ--VEETSREREERLRGWEAFLNAPEANRGLRRSDSVSASERAGPSRARHFS 403
Query: 202 PH 203
H
Sbjct: 404 EH 405
>gi|18203864|gb|AAH21715.1| Serine-arginine repressor protein (35 kDa) [Homo sapiens]
gi|123982510|gb|ABM82996.1| serine-arginine repressor protein (35 kDa) [synthetic construct]
gi|123997175|gb|ABM86189.1| serine-arginine repressor protein (35 kDa) [synthetic construct]
Length = 261
Score = 41.2 bits (95), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 83 EDLFEELSKYGEIESLNI-CDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIV 141
EDL E +YG I + I D G YVQF + A +AL NLN ++ GR I +
Sbjct: 24 EDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFEDVRGAEDALYNLNRKWVCGRQIEI 83
Query: 142 DFS 144
F+
Sbjct: 84 QFA 86
>gi|355757742|gb|EHH61267.1| hypothetical protein EGM_19235 [Macaca fascicularis]
Length = 754
Score = 41.2 bits (95), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 57/122 (46%), Gaps = 6/122 (4%)
Query: 83 EDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVD 142
EDL E SK+G+I L + D H G V FR+ E A ++ L+GR++ GR I
Sbjct: 289 EDLRVECSKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQ 345
Query: 143 -FSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRRRRSRSRSRSRS 201
+ TD++ E G+ F++ + +R LRR + R SR+R S
Sbjct: 346 AWDGTTDYQ--VEETSREREERLRGWEAFLNAPEANRGLRRSDSVSASERAGPSRARHFS 403
Query: 202 PH 203
H
Sbjct: 404 EH 405
>gi|58258445|ref|XP_566635.1| hypothetical protein CNA02490 [Cryptococcus neoformans var.
neoformans JEC21]
gi|57222772|gb|AAW40816.1| hypothetical protein CNA02490 [Cryptococcus neoformans var.
neoformans JEC21]
Length = 287
Score = 41.2 bits (95), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query: 84 DLFEELSKYGEIESLNIC-DNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVD 142
DL +E +YG++E + I D D G ++ R + AA + LNG GR I VD
Sbjct: 97 DLEDEFMRYGDVEKVVIVYDQRTDRSRGFGFITMRTVDDAARCIEKLNGLSLHGRNIRVD 156
Query: 143 FSPVTDFREATCRQY 157
+S +T QY
Sbjct: 157 YSATQKPHSSTPGQY 171
>gi|402911564|ref|XP_003918392.1| PREDICTED: HIV Tat-specific factor 1 homolog [Papio anubis]
Length = 645
Score = 41.2 bits (95), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 57/122 (46%), Gaps = 6/122 (4%)
Query: 83 EDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVD 142
EDL E SK+G+I L + D H G V FR+ E A ++ L+GR++ GR I
Sbjct: 184 EDLRVECSKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQ 240
Query: 143 -FSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRRRRSRSRSRSRS 201
+ TD++ E G+ F++ + +R LRR + R SR+R S
Sbjct: 241 AWDGTTDYQ--VEETSREREERLRGWEAFLNAPEANRGLRRSDSVSASERAGPSRARHFS 298
Query: 202 PH 203
H
Sbjct: 299 EH 300
>gi|291408297|ref|XP_002720373.1| PREDICTED: HIV-1 Tat specific factor 1 isoform 2 [Oryctolagus
cuniculus]
Length = 752
Score = 41.2 bits (95), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 83 EDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVD 142
EDL E SK+G+I+ L + D H G V FR+ E A ++ L+GR++ GR I +
Sbjct: 289 EDLRVECSKFGQIKKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAE 345
Query: 143 -FSPVTDFR 150
+ TD++
Sbjct: 346 AWDGTTDYQ 354
>gi|197102050|ref|NP_001125576.1| HIV Tat-specific factor 1 homolog [Pongo abelii]
gi|75070769|sp|Q5RB63.1|HTSF1_PONAB RecName: Full=HIV Tat-specific factor 1 homolog
gi|55728510|emb|CAH90997.1| hypothetical protein [Pongo abelii]
Length = 754
Score = 41.2 bits (95), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 57/122 (46%), Gaps = 6/122 (4%)
Query: 83 EDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVD 142
EDL E SK+G+I L + D H G V FR+ E A ++ L+GR++ GR I
Sbjct: 289 EDLRVECSKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQ 345
Query: 143 -FSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRRRRSRSRSRSRS 201
+ TD++ E G+ F++ + +R LRR + R SR+R S
Sbjct: 346 AWDGTTDYQ--VEETSREREERLRGWEAFLNAPEANRGLRRSDSVSASERAGPSRARHFS 403
Query: 202 PH 203
H
Sbjct: 404 EH 405
>gi|58331865|ref|NP_001011096.1| serine/arginine-rich splicing factor 10 [Xenopus (Silurana)
tropicalis]
gi|54038246|gb|AAH84490.1| FUS interacting protein (serine/arginine-rich) 1 [Xenopus
(Silurana) tropicalis]
Length = 258
Score = 41.2 bits (95), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Query: 64 PQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNI-CDNLADHMVGNVYVQFREEEHA 122
P +L R I D EDL E +YG I + + D G YVQF + A
Sbjct: 7 PPNTSLFVRNIADDIRS--EDLRREFGRYGPIVDVYVPLDYYTRRPRGFAYVQFEDVRDA 64
Query: 123 ANALRNLNGRFYAGRPIIVDFS 144
+AL NL+ ++ GR I + F+
Sbjct: 65 EDALHNLDKKWICGRQIEIQFA 86
>gi|291408295|ref|XP_002720372.1| PREDICTED: HIV-1 Tat specific factor 1 isoform 1 [Oryctolagus
cuniculus]
Length = 770
Score = 41.2 bits (95), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 83 EDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVD 142
EDL E SK+G+I+ L + D H G V FR+ E A ++ L+GR++ GR I +
Sbjct: 289 EDLRVECSKFGQIKKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAE 345
Query: 143 -FSPVTDFR 150
+ TD++
Sbjct: 346 AWDGTTDYQ 354
>gi|62088186|dbj|BAD92540.1| HIV TAT specific factor 1 variant [Homo sapiens]
Length = 758
Score = 41.2 bits (95), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 57/122 (46%), Gaps = 6/122 (4%)
Query: 83 EDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVD 142
EDL E SK+G+I L + D H G V FR+ E A ++ L+GR++ GR I
Sbjct: 292 EDLRVECSKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQ 348
Query: 143 -FSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRRRRSRSRSRSRS 201
+ TD++ E G+ F++ + +R LRR + R SR+R S
Sbjct: 349 AWDGTTDYQ--VEETSREREERLRGWEAFLNAPEANRGLRRSDSVSASERAGPSRARHFS 406
Query: 202 PH 203
H
Sbjct: 407 EH 408
>gi|30584025|gb|AAP36261.1| Homo sapiens HIV TAT specific factor 1 [synthetic construct]
gi|60653905|gb|AAX29645.1| HIV TAT specific factor 1 [synthetic construct]
gi|60653907|gb|AAX29646.1| HIV TAT specific factor 1 [synthetic construct]
Length = 756
Score = 41.2 bits (95), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 57/122 (46%), Gaps = 6/122 (4%)
Query: 83 EDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVD 142
EDL E SK+G+I L + D H G V FR+ E A ++ L+GR++ GR I
Sbjct: 289 EDLRVECSKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQ 345
Query: 143 -FSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRRRRSRSRSRSRS 201
+ TD++ E G+ F++ + +R LRR + R SR+R S
Sbjct: 346 AWDGTTDYQ--VEETSREREERLRGWEAFLNAPEANRGLRRSDSVSASERAGPSRARHFS 403
Query: 202 PH 203
H
Sbjct: 404 EH 405
>gi|397482309|ref|XP_003812372.1| PREDICTED: HIV Tat-specific factor 1 [Pan paniscus]
gi|410211494|gb|JAA02966.1| HIV-1 Tat specific factor 1 [Pan troglodytes]
gi|410261782|gb|JAA18857.1| HIV-1 Tat specific factor 1 [Pan troglodytes]
gi|410304122|gb|JAA30661.1| HIV-1 Tat specific factor 1 [Pan troglodytes]
gi|410333195|gb|JAA35544.1| HIV-1 Tat specific factor 1 [Pan troglodytes]
Length = 755
Score = 41.2 bits (95), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 57/122 (46%), Gaps = 6/122 (4%)
Query: 83 EDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVD 142
EDL E SK+G+I L + D H G V FR+ E A ++ L+GR++ GR I
Sbjct: 289 EDLRVECSKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQ 345
Query: 143 -FSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRRRRSRSRSRSRS 201
+ TD++ E G+ F++ + +R LRR + R SR+R S
Sbjct: 346 AWDGTTDYQ--VEETSREREERLRGWEAFLNAPEANRGLRRSDSVSASERAGPSRARHFS 403
Query: 202 PH 203
H
Sbjct: 404 EH 405
>gi|21361437|ref|NP_055315.2| HIV Tat-specific factor 1 [Homo sapiens]
gi|253970456|ref|NP_001156752.1| HIV Tat-specific factor 1 [Homo sapiens]
gi|74754346|sp|O43719.1|HTSF1_HUMAN RecName: Full=HIV Tat-specific factor 1; Short=Tat-SF1
gi|14602772|gb|AAH09896.1| HIV-1 Tat specific factor 1 [Homo sapiens]
gi|30582611|gb|AAP35532.1| HIV TAT specific factor 1 [Homo sapiens]
gi|61362248|gb|AAX42186.1| HIV TAT specific factor 1 [synthetic construct]
gi|119608874|gb|EAW88468.1| HIV-1 Tat specific factor 1, isoform CRA_a [Homo sapiens]
gi|119608875|gb|EAW88469.1| HIV-1 Tat specific factor 1, isoform CRA_a [Homo sapiens]
gi|157929022|gb|ABW03796.1| HIV-1 Tat specific factor 1 [synthetic construct]
Length = 755
Score = 41.2 bits (95), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 57/122 (46%), Gaps = 6/122 (4%)
Query: 83 EDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVD 142
EDL E SK+G+I L + D H G V FR+ E A ++ L+GR++ GR I
Sbjct: 289 EDLRVECSKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQ 345
Query: 143 -FSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRRRRSRSRSRSRS 201
+ TD++ E G+ F++ + +R LRR + R SR+R S
Sbjct: 346 AWDGTTDYQ--VEETSREREERLRGWEAFLNAPEANRGLRRSDSVSASERAGPSRARHFS 403
Query: 202 PH 203
H
Sbjct: 404 EH 405
>gi|426397566|ref|XP_004064985.1| PREDICTED: HIV Tat-specific factor 1 [Gorilla gorilla gorilla]
Length = 755
Score = 41.2 bits (95), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 57/122 (46%), Gaps = 6/122 (4%)
Query: 83 EDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVD 142
EDL E SK+G+I L + D H G V FR+ E A ++ L+GR++ GR I
Sbjct: 289 EDLRVECSKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQ 345
Query: 143 -FSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRRRRSRSRSRSRS 201
+ TD++ E G+ F++ + +R LRR + R SR+R S
Sbjct: 346 AWDGTTDYQ--VEETSREREERLRGWEAFLNAPEANRGLRRSDSVSASERAGPSRARHFS 403
Query: 202 PH 203
H
Sbjct: 404 EH 405
>gi|351695595|gb|EHA98513.1| HIV Tat-specific factor 1-like protein [Heterocephalus glaber]
Length = 728
Score = 40.8 bits (94), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 51/101 (50%), Gaps = 6/101 (5%)
Query: 83 EDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVD 142
+DL E SK+G+I+ L + D H G V FR+ E A + ++ L+GR++ GR I
Sbjct: 286 DDLRVECSKFGQIKKLLLFDR---HPDGVASVSFRDPEEADHCIQTLDGRWFGGRQITAQ 342
Query: 143 -FSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRR 182
+ TD++ + E G+ F+ + +R LRR
Sbjct: 343 PWDGTTDYQVEETAREREERLK--GWEAFLSTPEANRGLRR 381
>gi|255080824|ref|XP_002503985.1| predicted protein [Micromonas sp. RCC299]
gi|226519252|gb|ACO65243.1| predicted protein [Micromonas sp. RCC299]
Length = 809
Score = 40.8 bits (94), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 10/82 (12%)
Query: 69 LDPRKIQD------HFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHA 122
DP +I D + D E++ EE +K+G + L + H G V+V+F E A
Sbjct: 720 FDPAQIGDGGEGDAWWVDIGEEVREECAKHGAVTHLAV----DRHSQGFVFVKFATPEAA 775
Query: 123 ANALRNLNGRFYAGRPIIVDFS 144
A L+ R++ GR + +F+
Sbjct: 776 TGARSTLHARWFGGRLVTCEFT 797
>gi|322704095|gb|EFY95694.1| RNA splicing factor Pad-1 [Metarhizium anisopliae ARSEF 23]
Length = 558
Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 55/111 (49%), Gaps = 12/111 (10%)
Query: 39 KPSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKIQDHFEDFYEDLFEELS-KYGEIES 97
K P + NM R ++ DP+ + D D ++ +D+ E +YG +
Sbjct: 446 KTEAKPLPVNVNMASRCVVLHNMFDPEEEEGD-----DWVKELEDDIRAEAERQYGHVVH 500
Query: 98 LNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVDFSPVTD 148
+ + N G+VY++F + + NA++ LNGR++ GR +++ SPV D
Sbjct: 501 IAVDPNSK----GDVYLKFDKVQGGENAIKGLNGRYFGGR--MINASPVVD 545
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 32/65 (49%)
Query: 77 HFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAG 136
HF +DL +GE+E + + + G +VQFR+ A AL +NG AG
Sbjct: 281 HFNVTEQDLQAVFEPFGELEYVQLQKDDNGRSRGYGFVQFRDATQAREALEKMNGFDLAG 340
Query: 137 RPIIV 141
RPI V
Sbjct: 341 RPIRV 345
>gi|89272025|emb|CAJ83230.1| FUS interacting protein (serine/arginine-rich) 1 [Xenopus
(Silurana) tropicalis]
Length = 257
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Query: 64 PQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNI-CDNLADHMVGNVYVQFREEEHA 122
P +L R I D EDL E +YG I + + D G YVQF + A
Sbjct: 7 PPNTSLFVRNIADDIRS--EDLRREFGRYGPIVDVYVPLDYYTRRPRGFAYVQFEDVRDA 64
Query: 123 ANALRNLNGRFYAGRPIIVDFS 144
+AL NL+ ++ GR I + F+
Sbjct: 65 EDALHNLDKKWICGRQIEIQFA 86
>gi|194387946|dbj|BAG61386.1| unnamed protein product [Homo sapiens]
Length = 721
Score = 40.8 bits (94), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 57/122 (46%), Gaps = 6/122 (4%)
Query: 83 EDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVD 142
EDL E SK+G+I L + D H G V FR+ E A ++ L+GR++ GR I
Sbjct: 289 EDLRVECSKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQ 345
Query: 143 -FSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRRRRSRSRSRSRS 201
+ TD++ E G+ F++ + +R LRR + R SR+R S
Sbjct: 346 AWDGTTDYQ--VEETSREREERLRGWEAFLNAPEANRGLRRSDSVSASERAGPSRARHFS 403
Query: 202 PH 203
H
Sbjct: 404 EH 405
>gi|41055271|ref|NP_956827.1| splicing factor, arginine/serine-rich 13A [Danio rerio]
gi|33604116|gb|AAH56275.1| Zgc:65772 protein [Danio rerio]
gi|42542503|gb|AAH66442.1| Zgc:65772 [Danio rerio]
Length = 248
Score = 40.8 bits (94), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Query: 64 PQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNI-CDNLADHMVGNVYVQFREEEHA 122
P +L R I D E EDL E +YG I + I D + G Y+QF + A
Sbjct: 7 PPNSSLFVRNISD--ESRPEDLRREFGRYGPIVDVYIPLDFYSRRPRGFAYIQFEDVRDA 64
Query: 123 ANALRNLNGRFYAGRPIIVDFS 144
+AL NL+ ++ GR I + F+
Sbjct: 65 EDALHNLDRKWVCGRQIEIQFA 86
>gi|417404468|gb|JAA48986.1| Putative transcription elongation factor tat-sf1 [Desmodus
rotundus]
Length = 766
Score = 40.8 bits (94), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 57/122 (46%), Gaps = 6/122 (4%)
Query: 83 EDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVD 142
EDL E SK+G+I+ L + D H G V FR E A + ++ L+GR++ GR I
Sbjct: 289 EDLRVECSKFGQIKKLLLFDR---HPDGVASVSFRNPEEADHCIQTLDGRWFGGRQITAQ 345
Query: 143 -FSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRRRRSRSRSRSRS 201
+ TD++ E G+ F++ + ++ L+R + R SR R S
Sbjct: 346 AWDGTTDYQ--VEETTREREERLKGWEAFLNAPEANKGLQRSNSICASERAGPSRVRHFS 403
Query: 202 PH 203
H
Sbjct: 404 EH 405
>gi|405117618|gb|AFR92393.1| transformer-2-beta isoform 3 [Cryptococcus neoformans var. grubii
H99]
Length = 307
Score = 40.8 bits (94), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query: 84 DLFEELSKYGEIESLNIC-DNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVD 142
DL +E +YG++E + I D D G ++ R E AA + LNG GR I VD
Sbjct: 118 DLEDEFMRYGDVEKVVIVYDQRTDRSRGFGFITMRTVEDAARCIEKLNGLSLHGRNIRVD 177
Query: 143 FSPVTDFREATCRQY 157
+S +T QY
Sbjct: 178 YSATQKPHSSTPGQY 192
>gi|344264100|ref|XP_003404132.1| PREDICTED: serine/arginine-rich splicing factor 12-like [Loxodonta
africana]
Length = 387
Score = 40.8 bits (94), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 83 EDLFEELSKYGEIESLNI-CDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIV 141
EDL E +YG I + I D G YVQF + A +AL NLN ++ GR I +
Sbjct: 150 EDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFEDVRDAEDALYNLNRKWVCGRQIEI 209
Query: 142 DFS 144
F+
Sbjct: 210 QFA 212
>gi|56118384|ref|NP_001007946.1| serine/arginine-rich splicing factor 12 [Xenopus (Silurana)
tropicalis]
gi|51513232|gb|AAH80452.1| serine-arginine repressor protein (35 kDa) [Xenopus (Silurana)
tropicalis]
gi|89272962|emb|CAJ83214.1| serine-arginine repressor protein (35 kDa) [Xenopus (Silurana)
tropicalis]
Length = 253
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 83 EDLFEELSKYGEIESLNI-CDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIV 141
EDL E +YG I + + D G Y+QF + A +AL NLN ++ GR I +
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYIQFEDVRDAEDALYNLNRKWVCGRQIEI 83
Query: 142 DFS 144
F+
Sbjct: 84 QFA 86
>gi|238011430|gb|ACR36750.1| unknown [Zea mays]
gi|414590933|tpg|DAA41504.1| TPA: hypothetical protein ZEAMMB73_776046 [Zea mays]
gi|414590934|tpg|DAA41505.1| TPA: hypothetical protein ZEAMMB73_776046 [Zea mays]
Length = 190
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 83 EDLFEELSKYGEIESLNIC-DNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIV 141
+DLF KYGEI + I D G +V+++ E+ A A+ L+GR GR I+V
Sbjct: 31 DDLFPLFDKYGEIVDIYIPRDRRTGDSRGFAFVRYKYEDEAQKAVDRLDGRLVDGREIMV 90
Query: 142 DFS 144
F+
Sbjct: 91 QFA 93
>gi|296236526|ref|XP_002763352.1| PREDICTED: HIV Tat-specific factor 1 homolog [Callithrix jacchus]
Length = 744
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 57/122 (46%), Gaps = 6/122 (4%)
Query: 83 EDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVD 142
EDL E SK+G+I L + D H G V FR+ E A ++ L+GR++ GR I
Sbjct: 290 EDLRVECSKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQ 346
Query: 143 -FSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRRRRSRSRSRSRS 201
+ TD++ E G+ F++ + +R LRR + R SR+R S
Sbjct: 347 AWDGTTDYQ--VEETSREREERLRGWEAFLNAPESNRGLRRSDSVSASARAGPSRARHFS 404
Query: 202 PH 203
H
Sbjct: 405 EH 406
>gi|440907708|gb|ELR57819.1| HIV Tat-specific factor 1 [Bos grunniens mutus]
Length = 766
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 83 EDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIV 141
EDL E SK+G+I L + D H G V FR E A ++ LNGR++ GR I
Sbjct: 289 EDLRVECSKFGQIRKLLLFDR---HPDGVASVSFRSPEEADYCIQTLNGRWFGGRQITA 344
>gi|409050086|gb|EKM59563.1| hypothetical protein PHACADRAFT_250155 [Phanerochaete carnosa
HHB-10118-sp]
Length = 277
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 84 DLFEELSKYGEIESLNIC-DNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVD 142
DL EE S++G +E + I D +D G ++ E A+ ++ LNG GR I VD
Sbjct: 91 DLDEEFSRFGRVEKVVIVYDQRSDRSRGFGFITMSTVEEASRCIKELNGVELNGRRIRVD 150
Query: 143 FSPVTD 148
+S VTD
Sbjct: 151 YS-VTD 155
>gi|22902265|gb|AAH37591.1| FUS interacting protein (serine-arginine rich) 1 [Mus musculus]
Length = 261
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Query: 64 PQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNI-CDNLADHMVGNVYVQFREEEHA 122
P +L R + D + EDL E +YG I + + D G YVQF + A
Sbjct: 7 PPNTSLFVRNVADDTQS--EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDA 64
Query: 123 ANALRNLNGRFYAGRPIIVDFS 144
+AL NL+ ++ GR I + F+
Sbjct: 65 EDALHNLDRKWICGRQIEIQFA 86
>gi|387018626|gb|AFJ51431.1| Serine/arginine-rich splicing factor 12-like [Crotalus adamanteus]
Length = 234
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 83 EDLFEELSKYGEIESLNI-CDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIV 141
EDL E +YG + + I D G Y+QF + A +AL NLN ++ GR I +
Sbjct: 24 EDLRREFGRYGPVVDVYIPLDFYTRRPRGFAYIQFEDVRDAEDALYNLNRKWVCGRQIEI 83
Query: 142 DFS 144
F+
Sbjct: 84 QFA 86
>gi|402226431|gb|EJU06491.1| RNA-binding domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 304
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 84 DLFEELSKYGEIESLNIC-DNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVD 142
DL E ++YG +E + I D +D G ++Q E A + LNGR GR I VD
Sbjct: 87 DLEELFNQYGTVEHVTIVYDQRSDRSRGFGFIQMATVEDATKCISELNGRDVNGRNIRVD 146
Query: 143 FS 144
+S
Sbjct: 147 YS 148
>gi|403419677|emb|CCM06377.1| predicted protein [Fibroporia radiculosa]
Length = 582
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 85 LFEELSKYGEIESLNI-CDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVDF 143
L+E S+YG+++S+ + D G YV+F + E A +A ++G+ AGR + +D+
Sbjct: 430 LWETFSEYGDVKSVRVPTDRETGSPKGFAYVEFSDVETAKSAYEGVSGKEIAGRAVRLDY 489
Query: 144 S 144
S
Sbjct: 490 S 490
>gi|78191396|gb|ABB29919.1| unknown [Solanum tuberosum]
Length = 258
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 78 FEDFYEDLFEELSKYGEIESLNIC-DNLADHMVGNVYVQFREEEHAANALRNLNGRFYAG 136
F +DLF KYG++ + I D G +V+++ ++ A A+ L+GR G
Sbjct: 25 FRTTADDLFPLFDKYGKVVDVFIPRDRRTGDSRGFAFVRYKYQDEAQKAVEKLDGRVVDG 84
Query: 137 RPIIVDFS 144
R I+V F+
Sbjct: 85 REIMVRFA 92
>gi|336386026|gb|EGO27172.1| hypothetical protein SERLADRAFT_434943 [Serpula lacrymans var.
lacrymans S7.9]
Length = 284
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 84 DLFEELSKYGEIESLNIC-DNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVD 142
DL EE S++G +E + I D +D G +++ E A ++ LNG GR I VD
Sbjct: 98 DLDEEFSRFGRVEKVTIVYDQRSDRSRGFGFIKMSTVEEATRCIQELNGVDLNGRRIRVD 157
Query: 143 FSPVTD 148
+S VTD
Sbjct: 158 YS-VTD 162
>gi|341038993|gb|EGS23985.1| RNA splicing factor (pad-1)-like protein [Chaetomium thermophilum
var. thermophilum DSM 1495]
Length = 594
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 51/103 (49%), Gaps = 24/103 (23%)
Query: 64 PQGQALDPRKIQ-------------DHFEDFYEDLFEEL-----SKYGEIESLNICDNLA 105
P+ Q L P+ ++ ED+ ++L +E+ KYG + + + N
Sbjct: 485 PERQILKPKTVETKPLPVNVNMASRQQGEDWIKELEDEVRQEAEEKYGHVVHIAVDPN-- 542
Query: 106 DHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVDFSPVTD 148
G++Y++F + + NA++ LNGR++ GR ++ +PV D
Sbjct: 543 --SNGDIYLKFDKVQGGENAIKGLNGRYFDGR--MITAAPVVD 581
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 32/65 (49%)
Query: 77 HFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAG 136
HF DL +GE+E + + + G +VQFR+ +A AL +NG AG
Sbjct: 335 HFSITETDLQHVFEPFGELEFVQLQKDENGRSRGYGFVQFRDAANAREALEKMNGFDLAG 394
Query: 137 RPIIV 141
RPI V
Sbjct: 395 RPIRV 399
>gi|147899629|ref|NP_001079656.1| serine/arginine-rich splicing factor 10 [Xenopus laevis]
gi|28302303|gb|AAH46695.1| MGC53149 protein [Xenopus laevis]
Length = 258
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Query: 64 PQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNI-CDNLADHMVGNVYVQFREEEHA 122
P +L R I D EDL E +YG I + + D G YVQF + A
Sbjct: 7 PPNSSLFVRNIADDIRS--EDLRREFGRYGPIVDVYVPLDYYNRRPRGFAYVQFEDVRDA 64
Query: 123 ANALRNLNGRFYAGRPIIVDFS 144
+AL NL+ ++ GR I + F+
Sbjct: 65 EDALHNLDKKWICGRQIEIQFA 86
>gi|403300078|ref|XP_003940786.1| PREDICTED: HIV Tat-specific factor 1 homolog [Saimiri boliviensis
boliviensis]
Length = 743
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 83 EDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVD 142
EDL E SK+G+I L + D H G V FR+ E A ++ L+GR++ GR I
Sbjct: 289 EDLRVECSKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQ 345
Query: 143 -FSPVTDFR 150
+ TD++
Sbjct: 346 AWDGTTDYQ 354
>gi|449488891|ref|XP_004174435.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 10 [Taeniopygia guttata]
Length = 262
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 83 EDLFEELSKYGEIESLNI-CDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIV 141
EDL E +YG I + + D G YVQF + A +AL NL+ ++ GR I +
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
Query: 142 DFS 144
F+
Sbjct: 84 QFA 86
>gi|218200049|gb|EEC82476.1| hypothetical protein OsI_26921 [Oryza sativa Indica Group]
Length = 271
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 78 FEDFYEDLFEELSKYGEIESLNIC-DNLADHMVGNVYVQFREEEHAANALRNLNGRFYAG 136
F +DL KYGE+ + I D G +V+++ E+ A A+ L+GR G
Sbjct: 25 FRTTADDLSPLFEKYGEVVDIYIPRDRRTGDSRGFAFVRYKYEDEAQKAVDRLDGRVVDG 84
Query: 137 RPIIVDFS 144
R I+V F+
Sbjct: 85 REIMVQFA 92
>gi|355557671|gb|EHH14451.1| hypothetical protein EGK_00378 [Macaca mulatta]
gi|355745027|gb|EHH49652.1| hypothetical protein EGM_00350 [Macaca fascicularis]
Length = 261
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 83 EDLFEELSKYGEIESLNI-CDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIV 141
EDL E +YG I + + D G YVQF + A +AL NL+ ++ GR I +
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
Query: 142 DFS 144
F+
Sbjct: 84 QFA 86
>gi|115473447|ref|NP_001060322.1| Os07g0623300 [Oryza sativa Japonica Group]
gi|33146621|dbj|BAC79909.1| putative splicing factor, arginine/serine-rich 2 (Splicing factor
SC35) [Oryza sativa Japonica Group]
gi|113611858|dbj|BAF22236.1| Os07g0623300 [Oryza sativa Japonica Group]
gi|215687327|dbj|BAG91873.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222637485|gb|EEE67617.1| hypothetical protein OsJ_25178 [Oryza sativa Japonica Group]
Length = 275
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 78 FEDFYEDLFEELSKYGEIESLNIC-DNLADHMVGNVYVQFREEEHAANALRNLNGRFYAG 136
F +DL KYGE+ + I D G +V+++ E+ A A+ L+GR G
Sbjct: 25 FRTTADDLSPLFEKYGEVVDIYIPRDRRTGDSRGFAFVRYKYEDEAQKAVDRLDGRVVDG 84
Query: 137 RPIIVDFS 144
R I+V F+
Sbjct: 85 REIMVQFA 92
>gi|300360547|ref|NP_001177934.1| serine/arginine-rich splicing factor 10 isoform 3 [Homo sapiens]
gi|307133714|ref|NP_001182513.1| splicing factor, arginine/serine-rich 13A [Macaca mulatta]
gi|16265859|gb|AAL16666.1|AF419332_1 TLS-associated protein TASR-2 [Homo sapiens]
gi|193786066|dbj|BAG50956.1| unnamed protein product [Homo sapiens]
Length = 261
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 83 EDLFEELSKYGEIESLNI-CDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIV 141
EDL E +YG I + + D G YVQF + A +AL NL+ ++ GR I +
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
Query: 142 DFS 144
F+
Sbjct: 84 QFA 86
>gi|197097312|ref|NP_001125358.1| splicing factor, arginine/serine-rich 13A [Pongo abelii]
gi|55727814|emb|CAH90660.1| hypothetical protein [Pongo abelii]
Length = 262
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 83 EDLFEELSKYGEIESLNI-CDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIV 141
EDL E +YG I + + D G YVQF + A +AL NL+ ++ GR I +
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
Query: 142 DFS 144
F+
Sbjct: 84 QFA 86
>gi|16905517|ref|NP_473357.1| serine/arginine-rich splicing factor 10 isoform 2 [Homo sapiens]
gi|122937372|ref|NP_001073856.1| serine/arginine-rich splicing factor 10 isoform 2 [Mus musculus]
gi|332807987|ref|XP_003307925.1| PREDICTED: uncharacterized protein LOC456627 [Pan troglodytes]
gi|344287388|ref|XP_003415435.1| PREDICTED: serine/arginine-rich splicing factor 10-like isoform 1
[Loxodonta africana]
gi|397140010|ref|XP_003846472.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Homo
sapiens]
gi|397478979|ref|XP_003810811.1| PREDICTED: serine/arginine-rich splicing factor 10 [Pan paniscus]
gi|403287348|ref|XP_003934911.1| PREDICTED: serine/arginine-rich splicing factor 10 [Saimiri
boliviensis boliviensis]
gi|403287350|ref|XP_003934912.1| PREDICTED: serine/arginine-rich splicing factor 10 [Saimiri
boliviensis boliviensis]
gi|441676930|ref|XP_004092715.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Nomascus
leucogenys]
gi|47605579|sp|O75494.1|SRS10_HUMAN RecName: Full=Serine/arginine-rich splicing factor 10; AltName:
Full=40 kDa SR-repressor protein; Short=SRrp40; AltName:
Full=FUS-interacting serine-arginine-rich protein 1;
AltName: Full=Splicing factor SRp38; AltName:
Full=Splicing factor, arginine/serine-rich 13A; AltName:
Full=TLS-associated protein with Ser-Arg repeats;
Short=TASR; Short=TLS-associated protein with SR
repeats; AltName: Full=TLS-associated serine-arginine
protein; Short=TLS-associated SR protein
gi|47605750|sp|Q9R0U0.2|SRS10_MOUSE RecName: Full=Serine/arginine-rich splicing factor 10; AltName:
Full=FUS-interacting serine-arginine-rich protein 1;
AltName: Full=Neural-salient serine/arginine-rich
protein; AltName: Full=Neural-specific SR protein;
AltName: Full=Splicing factor, arginine/serine-rich 13A;
AltName: Full=TLS-associated protein with Ser-Arg
repeats; Short=TASR; Short=TLS-associated protein with
SR repeats; AltName: Full=TLS-associated serine-arginine
protein; Short=TLS-associated SR protein
gi|18034489|gb|AAL57514.1|AF449427_1 SRrp40 [Homo sapiens]
gi|3327957|gb|AAC26715.1| TLS-associated protein TASR-2 [Mus musculus]
gi|3327976|gb|AAC26727.1| TLS-associated protein TASR-2 [Homo sapiens]
gi|12852132|dbj|BAB29286.1| unnamed protein product [Mus musculus]
gi|13477159|gb|AAH05039.1| FUS interacting protein (serine/arginine-rich) 1 [Homo sapiens]
gi|15787483|gb|AAL06099.1| TLS-associated SR protein 2 [Homo sapiens]
gi|25006522|gb|AAN65380.1| splicing factor SRp38 [Homo sapiens]
gi|29144881|gb|AAH43060.1| FUS interacting protein (serine-arginine rich) 1 [Mus musculus]
gi|52789308|gb|AAH83082.1| FUS interacting protein (serine-arginine rich) 1 [Mus musculus]
gi|74214326|dbj|BAE40403.1| unnamed protein product [Mus musculus]
gi|74214388|dbj|BAE40431.1| unnamed protein product [Mus musculus]
gi|410223010|gb|JAA08724.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410261892|gb|JAA18912.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410261896|gb|JAA18914.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410261898|gb|JAA18915.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410302464|gb|JAA29832.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410302466|gb|JAA29833.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410302468|gb|JAA29834.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410330569|gb|JAA34231.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410330573|gb|JAA34233.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|417398022|gb|JAA46044.1| Putative serine/arginine-rich splicing factor 10 [Desmodus
rotundus]
Length = 262
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 83 EDLFEELSKYGEIESLNI-CDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIV 141
EDL E +YG I + + D G YVQF + A +AL NL+ ++ GR I +
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
Query: 142 DFS 144
F+
Sbjct: 84 QFA 86
>gi|346986281|ref|NP_001231298.1| serine/arginine-rich splicing factor 10 isoform 1 [Sus scrofa]
gi|338784425|gb|AEI98875.1| serine/arginine-rich splicing factor 10 isoform 2 [Sus scrofa]
Length = 262
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 83 EDLFEELSKYGEIESLNI-CDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIV 141
EDL E +YG I + + D G YVQF + A +AL NL+ ++ GR I +
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
Query: 142 DFS 144
F+
Sbjct: 84 QFA 86
>gi|62897549|dbj|BAD96714.1| FUS interacting protein (serine-arginine rich) 1 isoform 2 variant
[Homo sapiens]
Length = 262
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 83 EDLFEELSKYGEIESLNI-CDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIV 141
EDL E +YG I + + D G YVQF + A +AL NL+ ++ GR I +
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
Query: 142 DFS 144
F+
Sbjct: 84 QFA 86
>gi|410910852|ref|XP_003968904.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Takifugu
rubripes]
Length = 238
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Query: 64 PQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNI-CDNLADHMVGNVYVQFREEEHA 122
P +L R I D E EDL E +YG I + I D G Y+QF + A
Sbjct: 7 PPNTSLFVRNISD--ESRPEDLRREFGRYGPIVDVYIPLDFYTRQPRGFAYIQFEDVRDA 64
Query: 123 ANALRNLNGRFYAGRPIIVDFS 144
+AL +L+ ++ GR I + F+
Sbjct: 65 EDALHSLDRKWVCGRQIEIQFA 86
>gi|359318927|ref|XP_003638945.1| PREDICTED: serine/arginine-rich splicing factor 10 [Canis lupus
familiaris]
Length = 262
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 83 EDLFEELSKYGEIESLNI-CDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIV 141
EDL E +YG I + + D G YVQF + A +AL NL+ ++ GR I +
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
Query: 142 DFS 144
F+
Sbjct: 84 QFA 86
>gi|71897267|ref|NP_001026077.1| splicing factor, arginine/serine-rich 13A [Gallus gallus]
gi|53126728|emb|CAG30979.1| hypothetical protein RCJMB04_1g4 [Gallus gallus]
Length = 262
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 83 EDLFEELSKYGEIESLNI-CDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIV 141
EDL E +YG I + + D G YVQF + A +AL NL+ ++ GR I +
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
Query: 142 DFS 144
F+
Sbjct: 84 QFA 86
>gi|4001720|dbj|BAA35092.1| neural specific sr protein NSSR 1 [Mus musculus]
Length = 262
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 83 EDLFEELSKYGEIESLNI-CDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIV 141
EDL E +YG I + + D G YVQF + A +AL NL+ ++ GR I +
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
Query: 142 DFS 144
F+
Sbjct: 84 QFA 86
>gi|1667611|gb|AAB18823.1| Tat-SF1 [Homo sapiens]
Length = 754
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 83 EDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVD 142
EDL E SK+G+I L + D H G V FR+ E A ++ L+GR++ GR I
Sbjct: 289 EDLRVECSKFGQIRKLLLFDR---HPDGVASVSFRDPEEADYCIQTLDGRWFGGRQITAQ 345
Query: 143 -FSPVTDFR 150
+ TD++
Sbjct: 346 AWDGTTDYQ 354
>gi|426224259|ref|XP_004006291.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Ovis
aries]
Length = 262
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Query: 64 PQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNI-CDNLADHMVGNVYVQFREEEHA 122
P +L R + D + Y DL E +YG + + + D G YVQF + A
Sbjct: 7 PPNTSLFVRNVAD--DTRYGDLRREFGRYGPVVDVYVPLDFYTRRPRGFAYVQFEDVRDA 64
Query: 123 ANALRNLNGRFYAGRPIIVDFS 144
+AL NL+ ++ GR I + F+
Sbjct: 65 EDALHNLDRKWICGRQIEIQFA 86
>gi|126328572|ref|XP_001362618.1| PREDICTED: serine/arginine-rich splicing factor 10-like
[Monodelphis domestica]
Length = 262
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 83 EDLFEELSKYGEIESLNI-CDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIV 141
EDL E +YG I + + D G YVQF + A +AL NL+ ++ GR I +
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
Query: 142 DFS 144
F+
Sbjct: 84 QFA 86
>gi|390473557|ref|XP_003734621.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Callithrix
jacchus]
Length = 262
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 83 EDLFEELSKYGEIESLNIC-DNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIV 141
EDL E +YG I + + D G YVQF + A +ALRNL+ ++ GR + +
Sbjct: 24 EDLRREFGRYGPIVDVYVPPDFYTRRPRGFAYVQFEDVRDAEDALRNLDRKWICGRQMEI 83
Query: 142 DFS 144
F+
Sbjct: 84 QFA 86
>gi|74179690|dbj|BAE22485.1| unnamed protein product [Mus musculus]
Length = 262
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 83 EDLFEELSKYGEIESLNI-CDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIV 141
EDL E +YG I + + D G YVQF + A +AL NL+ ++ GR I +
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
Query: 142 DFS 144
F+
Sbjct: 84 QFA 86
>gi|452822795|gb|EME29811.1| splicing factor, arginine/serine-rich 2 [Galdieria sulphuraria]
Length = 211
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 84 DLFEELSKYGEIESLNICDNLAD-HMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVD 142
DL KYGE+ I N + H G +V+FR+EE A A+ ++GR GR I V
Sbjct: 42 DLTPLFDKYGEVVDCYIPRNRRNGHSRGFAFVRFRKEEDARKAMEEMDGREVDGRSITVQ 101
Query: 143 FS 144
F+
Sbjct: 102 FA 103
>gi|356524836|ref|XP_003531034.1| PREDICTED: uncharacterized protein LOC100778928 [Glycine max]
Length = 267
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 78 FEDFYEDLFEELSKYGEIESLNIC-DNLADHMVGNVYVQFREEEHAANALRNLNGRFYAG 136
F +DLF KYG++ + I D G +V+++ + A A+ L+GR G
Sbjct: 25 FRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFAFVRYKYADEAQKAVERLDGRMVDG 84
Query: 137 RPIIVDFS 144
R I V F+
Sbjct: 85 REITVQFA 92
>gi|242035597|ref|XP_002465193.1| hypothetical protein SORBIDRAFT_01g033710 [Sorghum bicolor]
gi|241919047|gb|EER92191.1| hypothetical protein SORBIDRAFT_01g033710 [Sorghum bicolor]
Length = 216
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 78 FEDFYEDLFEELSKYGEIESLNIC-DNLADHMVGNVYVQFREEEHAANALRNLNGRFYAG 136
F +DLF +YGE+ ++I D G +V++ E+ A +A+ L+G + G
Sbjct: 25 FRTTADDLFPLFDRYGEVVDIHIPRDRRTGESRGFAFVRYNYEDEAQDAIDGLDGMRFGG 84
Query: 137 RPIIVDFS 144
R ++V F+
Sbjct: 85 RALMVQFA 92
>gi|392592864|gb|EIW82190.1| RNA-binding domain-containing protein, partial [Coniophora puteana
RWD-64-598 SS2]
Length = 306
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 84 DLFEELSKYGEIESLNIC-DNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVD 142
DL +E S++G +E + I D +D G +++ E A ++ LNG GR I VD
Sbjct: 99 DLDDEFSRFGRVEKVTIVYDQRSDRSRGFGFIKMSAVEEATRCIQELNGVELNGRRIRVD 158
Query: 143 FSPVTD 148
+S VTD
Sbjct: 159 YS-VTD 163
>gi|444705508|gb|ELW46932.1| HIV Tat-specific factor 1 like protein [Tupaia chinensis]
Length = 623
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 83 EDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVD 142
EDL E SK+G+I+ L + D H G V FR+ + A ++ L+GR++ GR I
Sbjct: 168 EDLRVECSKFGQIKKLLLFDR---HPDGVASVSFRDPDEADLCIQTLDGRWFGGRQITAQ 224
Query: 143 -FSPVTDFR 150
+ TD++
Sbjct: 225 AWDGTTDYQ 233
>gi|296207043|ref|XP_002750472.1| PREDICTED: serine/arginine-rich splicing factor 10 isoform 2
[Callithrix jacchus]
Length = 262
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 83 EDLFEELSKYGEIESLNI-CDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIV 141
EDL E +YG I + + D G YVQF + A +AL NL+ ++ GR I +
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
Query: 142 DFS 144
F+
Sbjct: 84 QFA 86
>gi|449550007|gb|EMD40972.1| hypothetical protein CERSUDRAFT_111545 [Ceriporiopsis subvermispora
B]
Length = 286
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 84 DLFEELSKYGEIESLNIC-DNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVD 142
DL +E S++G ++ + I D +D G ++ E A ++ LNG GR I VD
Sbjct: 94 DLDDEFSRFGRVDKVTIVYDQRSDRSRGFGFITMSTTEEAGRCIKELNGVELNGRRIRVD 153
Query: 143 FSPVTD 148
+S VTD
Sbjct: 154 YS-VTD 158
>gi|356512057|ref|XP_003524737.1| PREDICTED: uncharacterized protein LOC100804370 [Glycine max]
Length = 267
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 78 FEDFYEDLFEELSKYGEIESLNIC-DNLADHMVGNVYVQFREEEHAANALRNLNGRFYAG 136
F +DLF KYG++ + I D G +V+++ + A A+ L+GR G
Sbjct: 25 FRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFAFVRYKYADEAQKAVERLDGRMVDG 84
Query: 137 RPIIVDFS 144
R I V F+
Sbjct: 85 REITVQFA 92
>gi|255082273|ref|XP_002508355.1| predicted protein [Micromonas sp. RCC299]
gi|226523631|gb|ACO69613.1| predicted protein [Micromonas sp. RCC299]
Length = 518
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 19/107 (17%)
Query: 40 PSISPTLLLSNMYQRPDMITPGVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLN 99
P + LLL NM+ + P + + D ED+ +E SK+G + ++
Sbjct: 422 PIPTQCLLLKNMFDPAEETEP---------------EWWIDIGEDVKDECSKHGPVSHIH 466
Query: 100 ICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVDFSPV 146
+ G VY++F E A+ A + L+GR++AG+ I +F V
Sbjct: 467 V----DKESRGFVYLKFGSTEGASAARQALHGRWFAGKMIAAEFQFV 509
>gi|74141008|dbj|BAE22085.1| unnamed protein product [Mus musculus]
Length = 278
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Query: 64 PQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNI-CDNLADHMVGNVYVQFREEEHA 122
P +L R + D EDL E +YG I + + D G YVQF + A
Sbjct: 7 PPNTSLFVRNVADDTRS--EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDA 64
Query: 123 ANALRNLNGRFYAGRPIIVDFS 144
+AL NL+ ++ GR I + F+
Sbjct: 65 EDALHNLDRKWICGRQIEIQFA 86
>gi|393245975|gb|EJD53484.1| RNA-binding domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 288
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 84 DLFEELSKYGEIESLNIC-DNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVD 142
DL EE ++YG +E + I D +D G +++ E A + LNG GR I VD
Sbjct: 102 DLDEEFARYGAVEKVTIVYDQRSDRSRGFGFIRMATVEDAQRCIDKLNGIELNGRRIRVD 161
Query: 143 FSPVTD 148
FS VTD
Sbjct: 162 FS-VTD 166
>gi|348519627|ref|XP_003447331.1| PREDICTED: serine/arginine-rich splicing factor 10-like
[Oreochromis niloticus]
Length = 240
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Query: 64 PQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNI-CDNLADHMVGNVYVQFREEEHA 122
P +L R I D E EDL E +YG I + I D G Y+QF + A
Sbjct: 7 PPNTSLFVRNISD--ESRPEDLRREFGRYGPIVDVYIPLDFYTRQPRGFAYIQFEDVRDA 64
Query: 123 ANALRNLNGRFYAGRPIIVDFS 144
+AL +L+ ++ GR I + F+
Sbjct: 65 EDALHSLDRKWVCGRQIEIQFA 86
>gi|325093985|gb|EGC47295.1| alpha-actinin [Ajellomyces capsulatus H88]
Length = 1058
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 64/147 (43%), Gaps = 25/147 (17%)
Query: 76 DHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYA 135
D ED EDLF ++ G I +L++ + A G +V ++ A NA+R +G
Sbjct: 154 DLTEDDLEDLF---TRIGPISALSLRYDRAGRSEGIAFVTYKRLVDAQNAIREFDGANAK 210
Query: 136 GRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRRRRSRS 195
G+PI + T R A + +F+ K S LF R+ + R+R+
Sbjct: 211 GQPITLTMISATPGRSAGRNPF-----------DFVEKPKGS------LFDRTEKPRTRN 253
Query: 196 RSRSRSPHKYRGGYEERSHGGGRGSGR 222
SRS SP E GRGSGR
Sbjct: 254 -SRSLSPE----ASESADVTTGRGSGR 275
>gi|406604132|emb|CCH44355.1| Polyadenylate-binding protein, cytoplasmic and nuclear
[Wickerhamomyces ciferrii]
Length = 349
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 84 DLFEELSKYGEIESLNIC-DNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVD 142
DL +E SKYGE+E + + D G ++ F + A A + NG GR II D
Sbjct: 96 DLQKEFSKYGEVERVRVVRDKDTSKSKGYAFILFDHDSSAKAAYKEANGLKIKGRAIITD 155
Query: 143 F 143
Sbjct: 156 I 156
>gi|410170856|ref|XP_003960061.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Homo
sapiens]
gi|426328339|ref|XP_004024960.1| PREDICTED: serine/arginine-rich splicing factor 10 [Gorilla gorilla
gorilla]
Length = 217
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Query: 64 PQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNI-CDNLADHMVGNVYVQFREEEHA 122
P +L R + D EDL E +YG I + + D G YVQF + A
Sbjct: 7 PPNTSLFVRNVADDTRS--EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDA 64
Query: 123 ANALRNLNGRFYAGRPIIVDFS 144
+AL NL+ ++ GR I + F+
Sbjct: 65 EDALHNLDRKWICGRQIEIQFA 86
>gi|395854840|ref|XP_003799887.1| PREDICTED: serine/arginine-rich splicing factor 10 [Otolemur
garnettii]
Length = 221
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 83 EDLFEELSKYGEIESLNI-CDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIV 141
EDL E +YG I + + D G YVQF + A +AL NL+ ++ GR I +
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
Query: 142 DFS 144
F+
Sbjct: 84 QFA 86
>gi|357490717|ref|XP_003615646.1| Splicing factor, arginine/serine-rich [Medicago truncatula]
gi|217073250|gb|ACJ84984.1| unknown [Medicago truncatula]
gi|355516981|gb|AES98604.1| Splicing factor, arginine/serine-rich [Medicago truncatula]
Length = 267
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 78 FEDFYEDLFEELSKYGEIESLNIC-DNLADHMVGNVYVQFREEEHAANALRNLNGRFYAG 136
F +DLF KYG++ + I D G +V+++ + A+ A+ L+GR G
Sbjct: 25 FRTTADDLFPLFDKYGKVVDIFIPRDRRTGESRGFAFVRYKYADEASKAVDRLDGRMVDG 84
Query: 137 RPIIVDFS 144
R I V F+
Sbjct: 85 REITVQFA 92
>gi|90079587|dbj|BAE89473.1| unnamed protein product [Macaca fascicularis]
Length = 219
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Query: 64 PQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNI-CDNLADHMVGNVYVQFREEEHA 122
P +L R + D EDL E +YG I + + D G YVQF + A
Sbjct: 7 PPNTSLFVRNVADDTRS--EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDA 64
Query: 123 ANALRNLNGRFYAGRPIIVDFS 144
+AL NL+ ++ GR I + F+
Sbjct: 65 EDALHNLDRKWICGRQIEIQFA 86
>gi|390600853|gb|EIN10247.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 329
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 84 DLFEELSKYGEIESLNIC-DNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVD 142
DL +E S++G++E + I D + G +++ E A A+ NLNG GR I VD
Sbjct: 90 DLDDEFSRFGQVEKVTIVYDQRSGRSRGFGFIKMATVEDATKAIENLNGVDLNGRRIRVD 149
Query: 143 FS 144
+S
Sbjct: 150 YS 151
>gi|255581357|ref|XP_002531488.1| serine/arginine rich splicing factor, putative [Ricinus communis]
gi|223528897|gb|EEF30895.1| serine/arginine rich splicing factor, putative [Ricinus communis]
Length = 257
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 78 FEDFYEDLFEELSKYGEIESLNIC-DNLADHMVGNVYVQFREEEHAANALRNLNGRFYAG 136
F +DLF KYG++ + I D G +V+++ + A A+ L+GR G
Sbjct: 25 FRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVERLDGRVVDG 84
Query: 137 RPIIVDFS 144
R I V F+
Sbjct: 85 REITVQFA 92
>gi|409081762|gb|EKM82121.1| hypothetical protein AGABI1DRAFT_112242 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426198598|gb|EKV48524.1| hypothetical protein AGABI2DRAFT_192114 [Agaricus bisporus var.
bisporus H97]
Length = 275
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 84 DLFEELSKYGEIESLNIC-DNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVD 142
DL +E S++G +E + I D +D G +++ + AA ++ LNG GR I VD
Sbjct: 97 DLDDEFSRFGRVEKVTIVYDQRSDRSRGFGFIKMSTVDEAARCIQELNGVELNGRRIRVD 156
Query: 143 FSPVTD 148
+S VTD
Sbjct: 157 YS-VTD 161
>gi|170575391|ref|XP_001893221.1| splicing factor, CC1-like family protein [Brugia malayi]
gi|158600898|gb|EDP37951.1| splicing factor, CC1-like family protein [Brugia malayi]
Length = 640
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 79 EDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRP 138
ED +F+ +G+IE+L I +L+ G YV FR + A+ +NG AGRP
Sbjct: 382 EDMLGRIFD---PFGKIENLEIATDLSGVSKGYAYVTFRHADDGKRAMEQMNGFELAGRP 438
Query: 139 IIV 141
+ V
Sbjct: 439 MKV 441
>gi|213513443|ref|NP_001133450.1| FUS-interacting serine-arginine-rich protein 1 [Salmo salar]
gi|209154048|gb|ACI33256.1| FUS-interacting serine-arginine-rich protein 1 [Salmo salar]
Length = 271
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Query: 64 PQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNI-CDNLADHMVGNVYVQFREEEHA 122
P +L R I D E EDL E +YG + + I D + G Y+QF + A
Sbjct: 7 PPNTSLFIRNISD--ESRPEDLRREFGRYGPVVDVYIPLDFYSRRPRGFAYIQFEDVRDA 64
Query: 123 ANALRNLNGRFYAGRPIIVDFS 144
+AL NL+ ++ GR I + F+
Sbjct: 65 EDALHNLDRKWVCGRQIEIQFA 86
>gi|255642028|gb|ACU21281.1| unknown [Glycine max]
Length = 254
Score = 38.1 bits (87), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 78 FEDFYEDLFEELSKYGEIESLNIC-DNLADHMVGNVYVQFREEEHAANALRNLNGRFYAG 136
F +DLF KYG++ + I D G +V+++ + A A+ L+GR G
Sbjct: 25 FRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFAFVRYKYADEAQKAVERLDGRMVDG 84
Query: 137 RPIIVDFS 144
R I V F+
Sbjct: 85 REITVQFA 92
>gi|313242082|emb|CBY34259.1| unnamed protein product [Oikopleura dioica]
Length = 186
Score = 38.1 bits (87), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 83 EDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVD 142
E L + SKYGEI + I + G +V+F ++ A +A+ L+GR GR I VD
Sbjct: 27 ESLRRKFSKYGEIGDVYIPKDKYGESRGFAFVRFHDKRDAGDAIDQLDGRDIDGREIRVD 86
Query: 143 FS 144
++
Sbjct: 87 YA 88
>gi|313227248|emb|CBY22395.1| unnamed protein product [Oikopleura dioica]
Length = 186
Score = 38.1 bits (87), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 83 EDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVD 142
E L + SKYGEI + I + G +V+F ++ A +A+ L+GR GR I VD
Sbjct: 27 ESLRRKFSKYGEIGDVYIPKDKYGESRGFAFVRFHDKRDAGDAIDQLDGRDIDGREIRVD 86
Query: 143 FS 144
++
Sbjct: 87 YA 88
>gi|395521768|ref|XP_003764987.1| PREDICTED: serine/arginine-rich splicing factor 10 [Sarcophilus
harrisii]
Length = 347
Score = 38.1 bits (87), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 83 EDLFEELSKYGEIESLNI-CDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIV 141
EDL E +YG I + + D G YVQF + A +AL NL+ ++ GR I +
Sbjct: 109 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 168
Query: 142 DFS 144
F+
Sbjct: 169 QFA 171
>gi|67517282|ref|XP_658521.1| hypothetical protein AN0917.2 [Aspergillus nidulans FGSC A4]
gi|40746790|gb|EAA65946.1| hypothetical protein AN0917.2 [Aspergillus nidulans FGSC A4]
gi|259488796|tpe|CBF88530.1| TPA: RNA splicing factor (Pad-1), putative (AFU_orthologue;
AFUA_1G15810) [Aspergillus nidulans FGSC A4]
Length = 552
Score = 37.7 bits (86), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 6/58 (10%)
Query: 91 KYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVDFSPVTD 148
KYG + + + N G++Y++F + NA++ LNGRF+ GR I PV D
Sbjct: 488 KYGHVVHIALDPNSQ----GDIYLKFDRVQGGENAIKGLNGRFFGGRQITA--QPVVD 539
>gi|154285798|ref|XP_001543694.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150407335|gb|EDN02876.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 395
Score = 37.7 bits (86), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 57/128 (44%), Gaps = 21/128 (16%)
Query: 76 DHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYA 135
D ED EDLF ++ G I +L++ + A G +V ++ A NA+R +G
Sbjct: 163 DLTEDDLEDLF---TRIGPISALSLRYDRAGRSEGIAFVTYKRLVDAQNAIREFDGANAK 219
Query: 136 GRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRRRRSRS 195
G+PI + T R A ++ F+ K S LF R+ + R+R+
Sbjct: 220 GQPITLTMISATPGRSAGRNPFD-----------FVEKPKGS------LFDRTEKPRTRN 262
Query: 196 RSRSRSPH 203
SRS SP
Sbjct: 263 -SRSLSPE 269
>gi|159470953|ref|XP_001693621.1| SR protein factor [Chlamydomonas reinhardtii]
gi|158283124|gb|EDP08875.1| SR protein factor [Chlamydomonas reinhardtii]
Length = 286
Score = 37.7 bits (86), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 83 EDLFEELSKYGEIESLNIC-DNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIV 141
EDL + KYGE++ + I D G +++F+E A +A+ NL+ GR I V
Sbjct: 65 EDLRAKFEKYGELKDVYIPRDYYTQRPRGFGFIEFKETRDAEDAMYNLDRSVVNGREISV 124
Query: 142 DFS 144
FS
Sbjct: 125 TFS 127
>gi|326933179|ref|XP_003212685.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Meleagris
gallopavo]
Length = 278
Score = 37.7 bits (86), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 83 EDLFEELSKYGEIESLNI-CDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIV 141
EDL E +YG I + + D G YVQF + A +AL NL+ ++ GR I +
Sbjct: 99 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 158
Query: 142 DFS 144
F+
Sbjct: 159 QFA 161
>gi|375332101|gb|AFA52590.1| hypothetical protein [Vaucheria litorea]
Length = 312
Score = 37.7 bits (86), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 21/96 (21%), Positives = 44/96 (45%), Gaps = 14/96 (14%)
Query: 62 VDPQGQALDPRKIQDHFEDFYEDLF--------------EELSKYGEIESLNICDNLADH 107
++ + + +P+K + D Y+ LF E +YG+I+ + + ++L D
Sbjct: 95 IEREIKKWNPKKDPNATGDAYKTLFVANMSYDTSEKKLRREFEQYGQIKKIRLVNDLEDQ 154
Query: 108 MVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVDF 143
G ++++ EE A + +GR R ++VD
Sbjct: 155 PRGYAFIEYEREEDMHMAYKKADGRKVDSRRLLVDV 190
>gi|336274132|ref|XP_003351820.1| hypothetical protein SMAC_00366 [Sordaria macrospora k-hell]
Length = 309
Score = 37.7 bits (86), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Query: 63 DPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHA 122
DP+G + I H+E EDL S+ G + L++ + A G +V + + A
Sbjct: 68 DPRGSKIRVDNI--HYELTQEDLEGLFSRIGPLVKLDMKYDRAGRSEGTAFVTYESPQDA 125
Query: 123 ANALRNLNGRFYAGRPIIVDFSP 145
+ A+R +G AG+PI + P
Sbjct: 126 SRAIREYDGANAAGQPIRLTLMP 148
>gi|225558206|gb|EEH06490.1| RNA binding domain-containing protein [Ajellomyces capsulatus
G186AR]
Length = 395
Score = 37.7 bits (86), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 57/128 (44%), Gaps = 21/128 (16%)
Query: 76 DHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYA 135
D ED EDLF ++ G I +L++ + A G +V ++ A NA+R +G
Sbjct: 163 DLTEDDLEDLF---TRIGPISALSLRYDRAGRSEGIAFVTYKRLVDAQNAIREFDGANAK 219
Query: 136 GRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRSRRRRSRS 195
G+PI + T R A ++ F+ K S LF R+ + R+R+
Sbjct: 220 GQPITLTMISATPGRSAGRNPFD-----------FVEKPKGS------LFDRTEKPRTRN 262
Query: 196 RSRSRSPH 203
SRS SP
Sbjct: 263 -SRSLSPE 269
>gi|296476640|tpg|DAA18755.1| TPA: FUS interacting protein (serine-arginine rich) 1-like [Bos
taurus]
Length = 262
Score = 37.4 bits (85), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 83 EDLFEELSKYGEIESLNI-CDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIV 141
EDL E +YG I + + D G YVQF + A +AL NL+ + GR I +
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKCICGRQIEI 83
Query: 142 DFS 144
F+
Sbjct: 84 QFA 86
>gi|327285770|ref|XP_003227605.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 10-like [Anolis carolinensis]
Length = 262
Score = 37.4 bits (85), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 83 EDLFEELSKYGEIESLNI-CDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIV 141
EDL E +YG I + + D G YVQF + A +A NL+ ++ GR I +
Sbjct: 24 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDAFHNLDRKWICGRQIEI 83
Query: 142 DFS 144
F+
Sbjct: 84 QFA 86
>gi|330840365|ref|XP_003292187.1| hypothetical protein DICPUDRAFT_99253 [Dictyostelium purpureum]
gi|325077575|gb|EGC31278.1| hypothetical protein DICPUDRAFT_99253 [Dictyostelium purpureum]
Length = 288
Score = 37.4 bits (85), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 7/62 (11%)
Query: 83 EDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALRNLNGRFYAGRPIIVD 142
ED+ SK+G+I+ L + G +V++ ++ A +A+ + N +F+ GR I+V+
Sbjct: 16 EDILNRFSKFGKIDKLEL-------RKGFCFVEYLDKNAADDAINSENKQFFLGRDIVVE 68
Query: 143 FS 144
S
Sbjct: 69 LS 70
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.137 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,706,795,402
Number of Sequences: 23463169
Number of extensions: 262855585
Number of successful extensions: 1479403
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2954
Number of HSP's successfully gapped in prelim test: 14447
Number of HSP's that attempted gapping in prelim test: 1266295
Number of HSP's gapped (non-prelim): 117985
length of query: 320
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 178
effective length of database: 9,027,425,369
effective search space: 1606881715682
effective search space used: 1606881715682
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 77 (34.3 bits)