Query 045809
Match_columns 549
No_of_seqs 247 out of 1658
Neff 7.0
Searched_HMMs 46136
Date Fri Mar 29 05:43:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045809.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/045809hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR00934 2a38euk potassium up 100.0 1.1E-72 2.4E-77 621.1 36.0 334 200-548 444-799 (800)
2 PRK10750 potassium transporter 100.0 3.4E-52 7.4E-57 450.7 31.7 382 42-547 71-482 (483)
3 TIGR00933 2a38 potassium uptak 100.0 1.2E-51 2.5E-56 439.1 30.3 360 63-534 5-390 (390)
4 COG0168 TrkG Trk-type K+ trans 100.0 9.5E-50 2.1E-54 432.7 30.8 401 33-547 17-487 (499)
5 KOG1341 Na+/K+ transporter [In 100.0 5.9E-47 1.3E-51 398.2 21.1 333 200-545 456-817 (854)
6 PF02386 TrkH: Cation transpor 100.0 6.3E-44 1.4E-48 375.4 15.6 322 200-546 6-354 (354)
7 PRK05482 potassium-transportin 100.0 8.5E-28 1.9E-32 258.9 27.5 239 251-540 221-498 (559)
8 TIGR00933 2a38 potassium uptak 99.9 2.3E-23 5E-28 222.1 18.4 254 246-543 14-280 (390)
9 TIGR00934 2a38euk potassium up 99.7 7.8E-17 1.7E-21 179.5 16.3 298 42-411 453-784 (800)
10 PRK10750 potassium transporter 99.7 3.6E-15 7.8E-20 162.4 19.3 248 246-543 96-353 (483)
11 COG0168 TrkG Trk-type K+ trans 99.6 4.9E-14 1.1E-18 154.0 21.5 245 71-411 196-470 (499)
12 PF02386 TrkH: Cation transpor 99.6 3.6E-14 7.7E-19 149.8 14.1 55 71-125 51-109 (354)
13 PRK05482 potassium-transportin 98.7 4.4E-07 9.6E-12 99.3 16.2 191 209-411 282-491 (559)
14 KOG1341 Na+/K+ transporter [In 97.9 2.6E-06 5.6E-11 92.3 -0.6 68 35-109 23-90 (854)
15 PF03814 KdpA: Potassium-trans 97.6 0.18 3.9E-06 55.6 30.7 398 20-538 31-492 (552)
16 COG2060 KdpA K+-transporting A 97.3 0.43 9.3E-06 51.9 29.1 142 373-538 333-499 (560)
17 TIGR00680 kdpA K+-transporting 96.8 1.2 2.6E-05 49.3 31.1 180 335-538 283-501 (563)
18 TIGR00680 kdpA K+-transporting 83.8 27 0.00059 38.9 14.5 39 75-113 335-373 (563)
19 PF07885 Ion_trans_2: Ion chan 77.4 8.6 0.00019 31.1 6.4 40 473-533 23-62 (79)
20 PF03814 KdpA: Potassium-trans 73.2 94 0.002 34.9 14.7 39 75-113 327-365 (552)
21 PF07885 Ion_trans_2: Ion chan 52.3 49 0.0011 26.6 6.1 60 53-118 8-67 (79)
22 COG2060 KdpA K+-transporting A 51.7 3.5E+02 0.0075 30.3 13.8 37 75-113 334-372 (560)
23 PLN03192 Voltage-dependent pot 51.6 1.2E+02 0.0027 35.9 11.7 47 364-412 242-289 (823)
24 PF12616 DUF3775: Protein of u 30.8 35 0.00076 28.0 1.9 23 515-538 10-32 (75)
25 PRK10537 voltage-gated potassi 29.5 5.2E+02 0.011 27.9 11.2 39 372-412 168-207 (393)
26 PRK10537 voltage-gated potassi 27.0 2.9E+02 0.0064 29.8 8.7 42 71-114 166-207 (393)
No 1
>TIGR00934 2a38euk potassium uptake protein, Trk family. The proteins of the Trk family are derived from Gram-negative and Gram-positive bacteria, yeast and wheat. The proteins of E. coli K12 TrkH and TrkG as well as several yeast proteins have been functionally characterized.The E. coli TrkH and TrkG proteins are complexed to two peripheral membrane proteins, TrkA, an NAD-binding protein, and TrkE, an ATP-binding protein. This complex forms the potassium uptake system. This family is specific for the eukaryotic Trk system.
Probab=100.00 E-value=1.1e-72 Score=621.09 Aligned_cols=334 Identities=31% Similarity=0.576 Sum_probs=296.5
Q ss_pred ccCchHhhHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHhhhccchhHHHHHHHhhhcccCccccccCCcccccccChh
Q 045809 200 KYNSVRVLVYVVLGYILVTHVVGSSLVALYTSLAPSAKQILKQKGLQIFTFSVFTTASTFSNCGFVPTNENMMVFKKNAL 279 (549)
Q Consensus 200 ~~~~~~~l~~~i~~~~~~i~~iGallL~l~~~~~~~~~~~~~~~~~~~~~~AiF~avSAf~naGFs~~~~sl~~y~~~~~ 279 (549)
||++++.|.++++.|+++++++|++++..|+...+.+++.++..|.+++|+|+|||+||||||||++.++||++|+++++
T Consensus 444 EYRaLk~L~~Iv~~Y~~~~~llG~i~l~~wi~~~~~~~~~l~~~gin~~W~aiFhAVSAFnNAGFsL~~dSM~~F~~~~~ 523 (800)
T TIGR00934 444 EYRALKCLCSIVLVYFLGFNILGFVLLLPWINHVKTYSEVVRSKGVSPTWWGFFTAMSAFANLGLTLTPESMVSFNKNSY 523 (800)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHhhcCccHHHHHHHHHHHHHhcCCCCcCCCcchhhccCcc
Confidence 89999999999999999999999999999987767777778788889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHhhcc-----hhhhHHHHhcchhhHHhhhcchhHHHHHHHHHHHHHHHHHHHH
Q 045809 280 LLLILFPQGLLGNTLYPSCLRFVIWVLKKITN-----REEFDYILRNSKEMIYRHLLSKAYSYFLAITVFGFIFVQLVLF 354 (549)
Q Consensus 280 v~~vi~~liilGGlgF~v~~~~i~~~~~r~~~-----~~~~~~ll~~~r~~~~~~l~~s~~tk~vl~~~~~l~~ig~il~ 354 (549)
+++++++||++||+|||+++++++|...|..+ ++.+.++++||||| +.++||+.+||+++.++++|++++++++
T Consensus 524 vllvm~~LIi~GntGFPVllrliiw~~~k~~~~~s~~~e~l~fll~~pRr~-~s~Lfps~~T~ill~tt~iL~~ig~ilf 602 (800)
T TIGR00934 524 LLLLMIWFIIIGNTGFPIFLRLIIWILFKISPDLSKRKESLGFLLDHPRRC-FTLLFPSGATWWLFFTLVGLNAIDLILF 602 (800)
T ss_pred HHHHHHHHHHHcccchHHHHHHHHHHHhhccccccchhhhhhhhccCccce-ecccccccchhhHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998766542 33455677888876 7778999999999999999999999999
Q ss_pred HHHhcccccCCCCCHHHHHHHHHHHHhccCCcccccccCCCchhHHHHHHHHHHhcCCcceEEe----------------
Q 045809 355 CALEWDSEATDGLNFFEKLVASLFQVVNSRHTGESVFDISIISPAILVLFVVMMYLPPYTSFWP---------------- 418 (549)
Q Consensus 355 ~l~e~~~~~~~~~~~~~~l~~slFqsvSarTAGFst~d~~~~s~~~~~lliiLMfIGgstt~~~---------------- 418 (549)
+++||+|++++++|+++|+++|+||++++|||||+++|++.+++++++++++|||||++|+..-
T Consensus 603 ~lLE~nn~tl~~lp~g~Ril~aLFQSVstRTAGFntVdls~Lspatlvl~iiLMyIGa~PtaggIK~TTvyee~sLgi~~ 682 (800)
T TIGR00934 603 IILDWGSSVVDGLSKGIKVLNGLFQSVSTRTAGFTVVDLSQLHPAIQVSYMLMMYVSVLPLAISIRRTNVYEEQSLGLYN 682 (800)
T ss_pred HHHhcCccccccCCHHHHHHHHHHHhcccccccccccchHhcChhHHHHHHHHHHhccCCccceeeceeeeheeheeeee
Confidence 9999998889999999999999999999999999999999999999999999999998764221
Q ss_pred ccccccccccccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCC-CCCcccHHHHHHHHhhcccCccCCCCccC
Q 045809 419 SRNREGDSRNFKEKKNKKKTFVQNFIFSQLSYLVIFIILVCITERDKMKK-DPLNFNVLNVTIEVISAYGNVGFSTGYSC 497 (549)
Q Consensus 419 ~r~~~~~~~~~~~r~i~~~~~~~a~~~~~l~~~~~~~~~l~~~e~~~~~~-~~~~~~~~~~lFEvvSA~gtvGlS~G~~~ 497 (549)
.+++++.... ++|++..+.+++++.+. +++++++++++|++|++++.. +|.++++++++|||+|||||||||+|+
T Consensus 683 ~~g~~~~~~~-~~rsi~~~~irrqLs~d-lw~I~l~~flI~I~E~~~l~~~~~~~fs~f~ILFEVVSAyGTVGLSlG~-- 758 (800)
T TIGR00934 683 EENEEHEGES-STKSFIGAHLRRQLSFD-LWYIFLGLFIICICEGRKIQDPDPPNFNVFNILFEVVSAYGTVGLSLGY-- 758 (800)
T ss_pred ccCCcccccc-ccccccHHHHHHHHHHH-HHHHHHHHHHHHHhcCccccccccccccHHHHHhhhhhhccceeecCCC--
Confidence 2333333113 67788888888887765 667778889999999766543 667799999999999999999999998
Q ss_pred cccCCCCCCCCCcccccccccChhhHHHHHHHHHhccCCccccCCCccccc
Q 045809 498 KRQLRPDSSCKDAWYGFVGRWSNQGKVILILVMFFGRIKKFNMKGGKAWQI 548 (549)
Q Consensus 498 ~~~~~~~~~~~~~~~s~t~~l~~~~Klili~lM~iGRl~~~t~~gg~~~~~ 548 (549)
|+.+||||++|++.||+|+|++|++||||++|.+.++||..
T Consensus 759 ----------p~~~~SfSg~ls~~sKLVII~vM~~GRhggLP~alDrAi~L 799 (800)
T TIGR00934 759 ----------SCSNYSFSGQFTTLSKLVIIAMLIRGRHRGLPYALDRAIIL 799 (800)
T ss_pred ----------CCcccccCCCCCcchHHHHhHHHHccCCCCCcccccceecC
Confidence 47799999999999999999999999999999999999975
No 2
>PRK10750 potassium transporter; Provisional
Probab=100.00 E-value=3.4e-52 Score=450.67 Aligned_cols=382 Identities=15% Similarity=0.143 Sum_probs=293.4
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCcccchhheecccccccccceee-CCccChHHHHHHHHHHHHhhhHHHHH
Q 045809 42 WIQLSYFISISSVGYLILRVSKPRDSSFINPKNIDVFFTSVSAMTGSSMSTVE-MEVFSNFQLIIMTILMFVGGEVFISM 120 (549)
Q Consensus 42 ~i~~~~f~~i~~iG~~lL~l~~~~~~~~~~~s~~DAlF~avSAvt~TGLs~vd-~~~~s~~gq~vl~~LiqiGGlg~~s~ 120 (549)
.+..+.|+++.++|++++++.. ...++++||+||++|++|+||+++.+ +|+++..-++...++.|+||+|++++
T Consensus 71 ~~v~~~W~~~~l~galPf~~~g-----~~~~s~~dA~FEs~Sg~TTTGaTvl~~~~~~p~sil~WRs~~qWiGGlGiivl 145 (483)
T PRK10750 71 LIVVLFWTVLGSVGALPFIFSE-----SPNLTITDAFFESFSGLTTTGATTLVGLDSLPHAILFYRQMLQWFGGMGIIVL 145 (483)
T ss_pred HHHHHHHHHHHHHHHHHHHHcC-----CCCCCHHHHHHHHHHhccccchhccCChhhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 5667899999999999999721 01368999999999999999999995 79999999999999999999999999
Q ss_pred HHHHH-hhccchhhhhhhcccCCCCCCCCCCCCCCCCCCCCcccccchhhcccccccccCCCCCCCcccccccCCCCccc
Q 045809 121 FGLHA-RSKFYSLNQLFENRINPNLTPSSSSSSSSSSSENSTEFTDQIELGIVSHSYITNEEPNNGLENEHRMSSNDDNL 199 (549)
Q Consensus 121 ~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 199 (549)
...++ +.+.+.++... .|. ..|. + +|++
T Consensus 146 ~vail~~lg~~~~~l~~-----aE~--------------~g~~-------------------~------------~~~~- 174 (483)
T PRK10750 146 AVAILPILGVGGMQLYR-----AEM--------------PGPL-------------------K------------DNKM- 174 (483)
T ss_pred HHHHHHhcCCCchheee-----ccc--------------CCCC-------------------c------------cccc-
Confidence 88887 43544333221 111 0000 0 1222
Q ss_pred ccCchHhhHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHhhhccchhHHHHHHHhhhcccCccccccCCcccccccChh
Q 045809 200 KYNSVRVLVYVVLGYILVTHVVGSSLVALYTSLAPSAKQILKQKGLQIFTFSVFTTASTFSNCGFVPTNENMMVFKKNAL 279 (549)
Q Consensus 200 ~~~~~~~l~~~i~~~~~~i~~iGallL~l~~~~~~~~~~~~~~~~~~~~~~AiF~avSAf~naGFs~~~~sl~~y~~~~~ 279 (549)
...++...|.+...|+.+++++++++.+ . + +++|||+|||+||+||+||++.|+|+ .|.+|+.
T Consensus 175 -~p~i~~ta~~l~~iY~~lT~~~~~ll~~--~---G----------m~~fdAi~ha~saisTgGFs~~~~si-~~~~~~~ 237 (483)
T PRK10750 175 -RPRIAETAKTLWLIYVLLTVACALALWF--A---G----------MDAFDAIGHSFSTIAIGGFSTHDASI-GYFDSPT 237 (483)
T ss_pred -chhHHHHHHHHHHHHHHHHHHHHHHHHH--c---C----------CcHHHHHHHHHHHHhccCcCCCcccc-ccccCHH
Confidence 2334556788889999999998887542 1 2 68999999999999999999999996 4667899
Q ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHhhcchhhhHHHHhcchhhHHhhhcchhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 045809 280 LLLILFPQGLLGNTLYPSCLRFVIWVLKKITNREEFDYILRNSKEMIYRHLLSKAYSYFLAITVFGFIFVQLVLFCALEW 359 (549)
Q Consensus 280 v~~vi~~liilGGlgF~v~~~~i~~~~~r~~~~~~~~~ll~~~r~~~~~~l~~s~~tk~vl~~~~~l~~ig~il~~l~e~ 359 (549)
++++++++|++||+||.++++++. + + + +++++++.|+|.++.+++++.+++++.++..|+
T Consensus 238 i~~v~~~~milgg~~F~l~~~~~~----~---~-~------------~~~~~~~~e~r~~l~~~~~~~~~~~~~l~~~~~ 297 (483)
T PRK10750 238 INTIIAIFLLISGCNYGLHFSLLS----G---R-S------------LKVYWRDPEFRMFIGVQLTLVVICTLVLWFHNV 297 (483)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHh----C---c-c------------cccccCCHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999988531 0 0 0 011223678899888888888888777765554
Q ss_pred ccccCCCCCHHHHHHHHHHHHhcc-CCcccccccCCCchhHHHHHHHHHHhcCC---cceEE---------------ecc
Q 045809 360 DSEATDGLNFFEKLVASLFQVVNS-RHTGESVFDISIISPAILVLFVVMMYLPP---YTSFW---------------PSR 420 (549)
Q Consensus 360 ~~~~~~~~~~~~~l~~slFqsvSa-rTAGFst~d~~~~s~~~~~lliiLMfIGg---stt~~---------------~~r 420 (549)
. .++.+++++++||++|+ ||+||++.|+++|++.++++++++||||| ||+.. .+|
T Consensus 298 ~------~~~~~~l~~s~Fq~vS~~tTtGF~t~d~~~w~~~~~~ll~~lMfIGG~~GSTaGGIKv~R~~vl~~~~~~~l~ 371 (483)
T PRK10750 298 Y------SSALMTLNQAFFQVVSMATTAGFTTDSIARWPLFLPVLLLCSAFIGGCAGSTGGGLKVIRILLLFKQGNRELK 371 (483)
T ss_pred c------cCHHHHHHHHHHeeeecccCCCCCCCChhhccHHHHHHHHHHHHHcCCcccCcccHHHHHHHHHHHHHHHHHH
Confidence 1 16789999999999998 99999999999999999999999999987 55422 123
Q ss_pred cccc--c---cccccCcccchhHHHHHHHHHHHHHHHHHHHHHH-HHcCCCCCCCCCcccHHHHHHHHhhcccCccCCCC
Q 045809 421 NREG--D---SRNFKEKKNKKKTFVQNFIFSQLSYLVIFIILVC-ITERDKMKKDPLNFNVLNVTIEVISAYGNVGFSTG 494 (549)
Q Consensus 421 ~~~~--~---~~~~~~r~i~~~~~~~a~~~~~l~~~~~~~~~l~-~~e~~~~~~~~~~~~~~~~lFEvvSA~gtvGlS~G 494 (549)
+..+ . .++ ++|+++++.++++..++.++.+++....+. ..++ +++.+++++++||.+|+|+|+|
T Consensus 372 ~~~~P~~V~~v~~-~gr~i~~~~v~~v~~~~~ly~~~~~~~~~~l~~~g---------~~~~sA~~~v~s~l~nvG~s~G 441 (483)
T PRK10750 372 RLVHPNAVYSIKL-GNRALPERILEAVWGFFSAYALVFIVSMLAIIATG---------VDDFSAFASVVATLNNLGPGLG 441 (483)
T ss_pred HhcCCCceeeeeE-CCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHcC---------CcHHHHHHHHHHHhcCCCCCch
Confidence 3222 1 134 889999999988888777766543332222 3332 6899999999999999999999
Q ss_pred ccCcccCCCCCCCCCcccccccccChhhHHHHHHHHHhccCCcccc---CCCcccc
Q 045809 495 YSCKRQLRPDSSCKDAWYGFVGRWSNQGKVILILVMFFGRIKKFNM---KGGKAWQ 547 (549)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~s~t~~l~~~~Klili~lM~iGRl~~~t~---~gg~~~~ 547 (549)
.+ .+||+ ++|+.+|++++++|++||+|++|+ ..+.+||
T Consensus 442 ~~------------~~~f~---~l~~~~K~il~~~MllGRLEi~tvl~~l~~~fwr 482 (483)
T PRK10750 442 VV------------ADNFT---SMNPVAKWILIANMLFGRLEVFTLLVLFTPTFWR 482 (483)
T ss_pred hh------------ccccc---cCCHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhc
Confidence 73 35775 999999999999999999999988 5666776
No 3
>TIGR00933 2a38 potassium uptake protein, TrkH family. The proteins of the Trk family are derived from Gram-negative and Gram-positive bacteria, yeast and wheat. The proteins of E. coli K12 TrkH and TrkG as well as several yeast proteins have been functionally characterized.The E. coli TrkH and TrkG proteins are complexed to two peripheral membrane proteins, TrkA, an NAD-binding protein, and TrkE, an ATP-binding protein. This complex forms the potassium uptake system.
Probab=100.00 E-value=1.2e-51 Score=439.15 Aligned_cols=360 Identities=23% Similarity=0.326 Sum_probs=257.8
Q ss_pred CCCCCCCCCCcccchhheecccccccccceeeC-CccChHHHHHHHHHHHHhhhHHHHHHHHHH---hhccchhhhhhhc
Q 045809 63 KPRDSSFINPKNIDVFFTSVSAMTGSSMSTVEM-EVFSNFQLIIMTILMFVGGEVFISMFGLHA---RSKFYSLNQLFEN 138 (549)
Q Consensus 63 ~~~~~~~~~~s~~DAlF~avSAvt~TGLs~vd~-~~~s~~gq~vl~~LiqiGGlg~~s~~~l~~---~~~~~~~~~~~~~ 138 (549)
|....++.+++|+||+|||+||+|+||++++|. ++++.++|+++.+|+|+||+|++++...++ ++|++.+++.+
T Consensus 5 P~~~~~~~~~s~~dA~FeavSa~ttTGltv~~~~~~~~~~~~~~r~~l~~iGGlG~~v~~~~~l~~~g~~~~~~~~l~-- 82 (390)
T TIGR00933 5 PFVISSGLPLSFIDALFTATSAVTTTGLTVLDTLESLPKAGLFLRSLLQQIGGLGFMVLAVAILILLGKKISLGARLY-- 82 (390)
T ss_pred CeeccCCCCCCHHHHHHhhHhhcccCCCeEccChhhcCHhHHHHHHHHHHHcChHHHHHHHHHHHHHccccCHHHHHH--
Confidence 544432335899999999999999999999985 899999999999999999999999998877 55555655553
Q ss_pred ccCCCCCCCCCCCCCCCCCCCCcccccchhhcccccccccCCCCCCCcccccccCCCCcccccCchHhhHHHHHHHHHHH
Q 045809 139 RINPNLTPSSSSSSSSSSSENSTEFTDQIELGIVSHSYITNEEPNNGLENEHRMSSNDDNLKYNSVRVLVYVVLGYILVT 218 (549)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~i~~~~~~i 218 (549)
.+ |+.+. + + .+++ .+.++. +...++.+
T Consensus 83 --~~-------------------------------------e~~~~-----~--~-~~~~--~~~i~~----~~~~~~~i 109 (390)
T TIGR00933 83 --LA-------------------------------------EALGP-----L--S-DDKL--LPLIKN----TAKFIFVI 109 (390)
T ss_pred --HH-------------------------------------HhCCC-----C--C-cccH--HHHHHH----HHHHHHHH
Confidence 00 10000 0 0 0112 122333 34444555
Q ss_pred HHHHHHHHHHHHhhcchhHHHhhhccchhHHHHHHHhhhcccCccccccCCcccccccChhHHHHHHHHHHHhcccHHHH
Q 045809 219 HVVGSSLVALYTSLAPSAKQILKQKGLQIFTFSVFTTASTFSNCGFVPTNENMMVFKKNALLLLILFPQGLLGNTLYPSC 298 (549)
Q Consensus 219 ~~iGallL~l~~~~~~~~~~~~~~~~~~~~~~AiF~avSAf~naGFs~~~~sl~~y~~~~~v~~vi~~liilGGlgF~v~ 298 (549)
|++++++..+.+.. . +.+++|||+|||+||+|||||++.|+|..+|.+++.++++++++|++||+||+++
T Consensus 110 y~~lt~l~~~~~~~--~--------g~~~~~~Aif~avSa~~taGFs~~~~~~~~~~~~~~i~~v~~~lm~iGg~gF~v~ 179 (390)
T TIGR00933 110 YLLGTILLAVRFVL--T--------GWMPLFDAIFHSISAFNNGGFSTHSDSSIGYFHDPSVNLVIAFLIILGGLGFTVH 179 (390)
T ss_pred HHHHHHHHHHHHHH--h--------cchHHHHHHHHHHHHHhcCCcCCCCCcchhhccChHHHHHHHHHHHHHhcCHHHH
Confidence 55555554443321 1 0158999999999999999999999966677788999999999999999999999
Q ss_pred HHHHHHHHHhhcchhhhHHHHhcchhhHHhhhcchhHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCHHHHHHHHHH
Q 045809 299 LRFVIWVLKKITNREEFDYILRNSKEMIYRHLLSKAYSYFLAITVFGFIFVQLVLFCALEWDSEATDGLNFFEKLVASLF 378 (549)
Q Consensus 299 ~~~i~~~~~r~~~~~~~~~ll~~~r~~~~~~l~~s~~tk~vl~~~~~l~~ig~il~~l~e~~~~~~~~~~~~~~l~~slF 378 (549)
+++... .| |. .+++ ..++|..+.++++++.++++.+++.|+++ ...+.++ +..+++.|
T Consensus 180 ~~~~~~--~~---~~-------------~~~l--~~~~~~~~~~~~~l~~~~~i~~~l~~~~~-~~~~~~~-~~~~~~~f 237 (390)
T TIGR00933 180 YDVYLL--LR---KR-------------VFKL--SLDTKVRLFVTFLLLAIGFILFLLLERGN-TLYSYSF-GALLLSAF 237 (390)
T ss_pred HHHHHH--cc---cC-------------ccee--ecCccHHHHHHHHHHHHHHHHHHHHHHcc-cccCCCH-HHHHHHHH
Confidence 875311 01 00 0112 34666666777778888888888888865 2333444 45677777
Q ss_pred HHhcc-CCcccccccCCCchhHHHHHHHHHHhcCC---cceEE-------e--------cc-ccccccccccCcccchhH
Q 045809 379 QVVNS-RHTGESVFDISIISPAILVLFVVMMYLPP---YTSFW-------P--------SR-NREGDSRNFKEKKNKKKT 438 (549)
Q Consensus 379 qsvSa-rTAGFst~d~~~~s~~~~~lliiLMfIGg---stt~~-------~--------~r-~~~~~~~~~~~r~i~~~~ 438 (549)
|++|+ ||+||++.|+++|+++++++++++||||| ||+.. + +| +.++. .+ .+|+++++.
T Consensus 238 ~~~s~~~T~Gfst~d~~~~~~~~~lll~~lMfIGg~~gSTaGGiK~~r~~vl~~~~~~~~~~~~~~~-~v-~~~~i~~~~ 315 (390)
T TIGR00933 238 FQSSTLRTAGFSTIDFAALPTATLVLLLLLMFIGGCSGSTAGGIKTTTFAILLKQVYREIRRGIHPR-II-FSRRIGGKT 315 (390)
T ss_pred HHHhhccCCCccccChhhcCHHHHHHHHHHHHHcCCCcccCCchHHHHHHHHHHHHHHHHHccCCCc-eE-EeEEECCee
Confidence 77777 99999999999999999999999999987 55321 1 23 22222 23 778888888
Q ss_pred HHHHHHHHHHHHHH--HHHHHHHHHcCCCCCCCCCcccHHHHHHHHhhcccCccCCCCccCcccCCCCCCCCCccccccc
Q 045809 439 FVQNFIFSQLSYLV--IFIILVCITERDKMKKDPLNFNVLNVTIEVISAYGNVGFSTGYSCKRQLRPDSSCKDAWYGFVG 516 (549)
Q Consensus 439 ~~~a~~~~~l~~~~--~~~~~l~~~e~~~~~~~~~~~~~~~~lFEvvSA~gtvGlS~G~~~~~~~~~~~~~~~~~~s~t~ 516 (549)
+.++.....+++++ +++++++..|-. ...+++.+++||++||++|||+|+|+. ++
T Consensus 316 v~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~fe~~Sa~~tvGls~g~~------------------~~ 372 (390)
T TIGR00933 316 IDKAILISVWSFFLVFALIFLLSILELI-----SSGYDFLTSLFEVVSAFGTVGLSVGLT------------------TA 372 (390)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHh-----ccCCCHHHHHHHHHHHhcCcCCCCCCC------------------cc
Confidence 88887765554433 334444444411 012789999999999999999999961 36
Q ss_pred ccChhhHHHHHHHHHhcc
Q 045809 517 RWSNQGKVILILVMFFGR 534 (549)
Q Consensus 517 ~l~~~~Klili~lM~iGR 534 (549)
++|+.+|++++++|++||
T Consensus 373 ~l~~~~k~il~~~M~~GR 390 (390)
T TIGR00933 373 NLPDAGKLILIVLMFIGR 390 (390)
T ss_pred cCCHHHHHHHHHHHHcCC
Confidence 999999999999999999
No 4
>COG0168 TrkG Trk-type K+ transport systems, membrane components [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.5e-50 Score=432.73 Aligned_cols=401 Identities=20% Similarity=0.264 Sum_probs=286.2
Q ss_pred HhhcccCHHHHH------HHHHHHHHHHH---HHHhhcCCCCCCC--------------CCCCcccchhheecc--cccc
Q 045809 33 FLVLKVNPLWIQ------LSYFISISSVG---YLILRVSKPRDSS--------------FINPKNIDVFFTSVS--AMTG 87 (549)
Q Consensus 33 ~~~~~~~p~~i~------~~~f~~i~~iG---~~lL~l~~~~~~~--------------~~~~s~~DAlF~avS--Avt~ 87 (549)
+....+.|.++. ..+|...+++| +++|++ |.++++ .....+.|+.|+++| +.|.
T Consensus 17 ~~~~~l~P~~~~~~~~~~~~~f~~~~~i~~~~~~ll~~-~~~~~~~~~~~~~~i~~~~w~~~~~~~~~pF~~~s~~~a~f 95 (499)
T COG0168 17 FSLLMLVPALVALYYEDGLLAFAITILIGLLIGLLLSL-PFRHEPDELRDGFLIVALFWLVASSFGALPFTASSSTDALF 95 (499)
T ss_pred HHHHhhhhHHHHHhccchhHHHHHHHHHHHHHHHHhcC-cccCCCccchhhhHHHHHHhHHHHHHHHHHHHhhhccceEE
Confidence 344456677776 77888888999 999997 555542 123468899999999 9999
Q ss_pred cccceeeC-CccChHH-----HHHHHHHHHHhhhH---HHHHHHHHHhhccchhhhhhhcccCCCCCCCCCCCCCCCCCC
Q 045809 88 SSMSTVEM-EVFSNFQ-----LIIMTILMFVGGEV---FISMFGLHARSKFYSLNQLFENRINPNLTPSSSSSSSSSSSE 158 (549)
Q Consensus 88 TGLs~vd~-~~~s~~g-----q~vl~~LiqiGGlg---~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (549)
||++.+++ +.+...| |.+++.+.|+||+| ++++...+++++....+|++ .+
T Consensus 96 e~lS~~tttg~t~~~g~~~~p~~il~~r~~l~wlGgmgi~vl~~~il~~~~~~~~~l~----~~---------------- 155 (499)
T COG0168 96 EGLSGVTTTGATVLFGLDSLPQSILFWRSQLGWLGGMGIIVLAVAILPRLGVGGMRLY----RA---------------- 155 (499)
T ss_pred eeeceEecCCceEecCCccccHHHHHHHHHHCCCCeehHHHHHHHHHHhcccHHHHHH----HH----------------
Confidence 99999986 5566677 89999999877775 44555555555544455543 00
Q ss_pred CCcccccchhhcccccccccCCCCCCCcccccccCCCCcccccCchHhhHHHHHHHHHHHHHHHHHHHHHHHhhcchhHH
Q 045809 159 NSTEFTDQIELGIVSHSYITNEEPNNGLENEHRMSSNDDNLKYNSVRVLVYVVLGYILVTHVVGSSLVALYTSLAPSAKQ 238 (549)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~i~~~~~~i~~iGallL~l~~~~~~~~~~ 238 (549)
|++. ..+ .+.++...+.+..+...+|+++++++.+.+.. .
T Consensus 156 ---------------------e~~~-----------~~~---~~~i~~~i~~~~~~~~~iy~~~t~l~~~~~~~--~--- 195 (499)
T COG0168 156 ---------------------EARG-----------PTK---MGKIRPRIKNTAKTLWLIYLLLTILLALAFIL--A--- 195 (499)
T ss_pred ---------------------HccC-----------CCc---cccchHHHHHHHHHHHHHHHHHHHHHHHHHHh--c---
Confidence 1110 000 12223334555566677777777776655432 1
Q ss_pred HhhhccchhHHHHHHHhhhcccCccccccCCcccccccChhHHHHHHHHHHHhcccHHHHHHHHHHHHHhhcchhhhHHH
Q 045809 239 ILKQKGLQIFTFSVFTTASTFSNCGFVPTNENMMVFKKNALLLLILFPQGLLGNTLYPSCLRFVIWVLKKITNREEFDYI 318 (549)
Q Consensus 239 ~~~~~~~~~~~~AiF~avSAf~naGFs~~~~sl~~y~~~~~v~~vi~~liilGGlgF~v~~~~i~~~~~r~~~~~~~~~l 318 (549)
.++++||+|||+||+||||||+.|+|+.+|++|+.++++++++|++||+||+++++++.|. | +.+.+
T Consensus 196 ------gm~~~dAi~hs~Sa~~ngGFS~~~~Si~~f~~~~~i~~i~~~liI~GgigF~v~~~~~~~~--k-----~~~~l 262 (499)
T COG0168 196 ------GMPLFDAIFHSMSAFNNGGFSTHDASIGYFNGSPLINLIITILIILGGIGFPVHYRLLIWI--K-----SLKFL 262 (499)
T ss_pred ------cCCHHHHHHHHHHHhhcCCCCCCcchhhhcccChhHHHHHHHHHHHhcCChHHHHHHHHhh--h-----hhhhh
Confidence 1689999999999999999999999999998899999999999999999999999976553 1 11122
Q ss_pred HhcchhhHHhhhcchhHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCC----CHHHHHHHH---HHHHhccCCcccccc
Q 045809 319 LRNSKEMIYRHLLSKAYSYFLAITVFGFIFVQLVLFCALEWDSEATDGL----NFFEKLVAS---LFQVVNSRHTGESVF 391 (549)
Q Consensus 319 l~~~r~~~~~~l~~s~~tk~vl~~~~~l~~ig~il~~l~e~~~~~~~~~----~~~~~l~~s---lFqsvSarTAGFst~ 391 (549)
++ ++|....+.+.+...+++.++++|++++ ...+ ++.+++.++ +||++++|| ||+++
T Consensus 263 ~~--------------d~k~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~f~~vs~~f~tg~trt-gf~~v 326 (499)
T COG0168 263 SL--------------DPKLRFTLTLLLLATGLLALFLLELNNP-DGGYSFFLSLRDAFFQSVSAIFQTGFTRT-GFNTV 326 (499)
T ss_pred hc--------------ChhHHHHHHHHHHHHHHHHHHHHHHhcc-cccchhHHHHHHHHHhHhHHheecccccC-CCccc
Confidence 23 3333444555566667777777888764 2222 466777777 777788888 99999
Q ss_pred cCCCchhHHHHHHHHHHhcCC---cceEE-------e--------cc--cccc----ccccccCcccchhHHHHHHHHHH
Q 045809 392 DISIISPAILVLFVVMMYLPP---YTSFW-------P--------SR--NREG----DSRNFKEKKNKKKTFVQNFIFSQ 447 (549)
Q Consensus 392 d~~~~s~~~~~lliiLMfIGg---stt~~-------~--------~r--~~~~----~~~~~~~r~i~~~~~~~a~~~~~ 447 (549)
|+++|+++++++++++||||| ||+.. + +| ++++ + ++ ++|++++++++++..++.
T Consensus 327 d~~~~~~~~~~~~~~~MfIGg~~gSTaGGIK~~r~~il~~~~~~~l~~~~~p~~v~~~-k~-~~r~i~~~~i~~~~~~~~ 404 (499)
T COG0168 327 DLSQWPPATLVLLMLLMFIGGSPGSTAGGIKTTRFAVLLKALKRELRRLGHPNAVISV-KI-FGRAIDEDTIRKALAFFF 404 (499)
T ss_pred chhhcChHHHHHHHHHHHHcCCccccccchHHHHHHHHHHHHHHHHHHhcCcccceee-EE-cCccCCHHHHHHHHHHHH
Confidence 999999999999999999987 45321 1 23 3444 2 35 899999999999999888
Q ss_pred HHHHHHH--HHHHHHHcCCCCCCCCCcccHHHHHHHHhhcccCccCCCCccCcccCCCCCCCCCcccccccccChhhHHH
Q 045809 448 LSYLVIF--IILVCITERDKMKKDPLNFNVLNVTIEVISAYGNVGFSTGYSCKRQLRPDSSCKDAWYGFVGRWSNQGKVI 525 (549)
Q Consensus 448 l~~~~~~--~~~l~~~e~~~~~~~~~~~~~~~~lFEvvSA~gtvGlS~G~~~~~~~~~~~~~~~~~~s~t~~l~~~~Kli 525 (549)
++++++. .+++...+. .++.+++||++||+||||||+|++. + |..++ + +++.+|++
T Consensus 405 l~~~~~~i~~~~l~~~~~---------~~~~~~lfEv~SA~gtVGlSlG~t~-----~----~~~~~---~-~~~~~K~v 462 (499)
T COG0168 405 LYLLILIIGALILILTGY---------DPFIDALFEVVSAFGTVGLSLGITG-----D----LASNF---A-LPPLAKLV 462 (499)
T ss_pred HHHHHHHHHHHHHHHhcC---------ccHHHHHHHHHHHhhcCCCCCCCCC-----C----Ccccc---c-cCchHHHH
Confidence 8766543 334444442 1599999999999999999999852 1 12222 3 88999999
Q ss_pred HHHHHHhccCCcccc---CCCcccc
Q 045809 526 LILVMFFGRIKKFNM---KGGKAWQ 547 (549)
Q Consensus 526 li~lM~iGRl~~~t~---~gg~~~~ 547 (549)
++++||+||+|++|+ .-+..|+
T Consensus 463 li~~M~~GRleil~~lv~~~~~~~~ 487 (499)
T COG0168 463 LIALMLIGRLEILTVLVLFTPLFWR 487 (499)
T ss_pred HHHHHHhhccchhhHHHhhhhhhcc
Confidence 999999999999998 4555554
No 5
>KOG1341 consensus Na+/K+ transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.9e-47 Score=398.23 Aligned_cols=333 Identities=29% Similarity=0.559 Sum_probs=284.2
Q ss_pred ccCchHhhHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHhhhccchhHHHHHHHhhhcccCccccccCCcccccccChh
Q 045809 200 KYNSVRVLVYVVLGYILVTHVVGSSLVALYTSLAPSAKQILKQKGLQIFTFSVFTTASTFSNCGFVPTNENMMVFKKNAL 279 (549)
Q Consensus 200 ~~~~~~~l~~~i~~~~~~i~~iGallL~l~~~~~~~~~~~~~~~~~~~~~~AiF~avSAf~naGFs~~~~sl~~y~~~~~ 279 (549)
||+++|.+--+++.|+++..++|.+.+..|++....++......|..+.|+|+|.|+|||+|.||++.++|+.+|+.+.+
T Consensus 456 EyRAlk~Lcsil~vY~l~~nIvafV~llv~i~t~k~~~eVv~~~gisp~ww~~FTs~S~F~nlGfslt~~smvsF~kai~ 535 (854)
T KOG1341|consen 456 EYRALKCLCSILVVYFLGWNIVAFVTLLVFIYTAKTSREVVRSKGISPGWWAFFTSMSAFNNLGFSLTPDSMVSFNKAIF 535 (854)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhhhhcccCCCCcchhhhhhHHHHHhccCcccCcccccccccchh
Confidence 99999999999999999999999999888877665555566677888999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHhhcc-----hhhhHHHHhcchhhHHhhhcchhHHHHHHHHHHHHHHHHHHHH
Q 045809 280 LLLILFPQGLLGNTLYPSCLRFVIWVLKKITN-----REEFDYILRNSKEMIYRHLLSKAYSYFLAITVFGFIFVQLVLF 354 (549)
Q Consensus 280 v~~vi~~liilGGlgF~v~~~~i~~~~~r~~~-----~~~~~~ll~~~r~~~~~~l~~s~~tk~vl~~~~~l~~ig~il~ 354 (549)
.+++.+.+|++|++|||+++++++|.+.|..+ |+...++++||||| +..+||+..+++++.+.+++.++.+++|
T Consensus 536 plil~~~fIi~GNTgFPi~Lr~iIWimyKit~~~~~~~Eal~fLldHpRrc-fTlLfps~~tw~Lf~tl~~lni~d~ilF 614 (854)
T KOG1341|consen 536 PLILMIPFIIIGNTGFPIFLRFIIWIMYKITRFSSQFKEALYFLLDHPRRC-FTLLFPSGATWVLFLTLLGLNIIDLILF 614 (854)
T ss_pred HHHHHHHHHHHcCCCchHHHHHHHHHhhhcccchhhHHHhhhHHhcCCcce-eEEEecCccchhHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998764 45677789999987 8889999999999999999999999999
Q ss_pred HHHhcccccCCCCCHHHHHHHHHHHHhccCCcccccccCCCchhHHHHHHHHHHhcCCcceEEeccccc---ccc-----
Q 045809 355 CALEWDSEATDGLNFFEKLVASLFQVVNSRHTGESVFDISIISPAILVLFVVMMYLPPYTSFWPSRNRE---GDS----- 426 (549)
Q Consensus 355 ~l~e~~~~~~~~~~~~~~l~~slFqsvSarTAGFst~d~~~~s~~~~~lliiLMfIGgstt~~~~r~~~---~~~----- 426 (549)
.++||++...++++-++++..|+||+|++|||||+.+|++++.|+.++.++++|||+.+|....+|..+ +..
T Consensus 615 ~vlD~gS~~v~~lskgyRvv~~lFQsV~TRtaGftvVDLSqLhPaIlVsymlMMYisvyplaisir~tnvyEe~slg~y~ 694 (854)
T KOG1341|consen 615 MVLDFGSEVVESLSKGYRVVNALFQSVCTRTAGFTVVDLSQLHPAILVSYMLMMYISVYPLAISIRRTNVYEERSLGLYA 694 (854)
T ss_pred hhhhcchHHHHhchhHHHHHHHHHHHhhccccCceEeEhHHhChHHHHHHHHHHhccccceeEeeeccceeehhcCCccc
Confidence 999998877888999999999999999999999999999999999999999999999998766555321 100
Q ss_pred -c--cc-c-------CcccchhHHHHHHHHH----HHHHHHHHHHHHHHHcCCCC-CCCCCcccHHHHHHHHhhcccCcc
Q 045809 427 -R--NF-K-------EKKNKKKTFVQNFIFS----QLSYLVIFIILVCITERDKM-KKDPLNFNVLNVTIEVISAYGNVG 490 (549)
Q Consensus 427 -~--~~-~-------~r~i~~~~~~~a~~~~----~l~~~~~~~~~l~~~e~~~~-~~~~~~~~~~~~lFEvvSA~gtvG 490 (549)
. .+ . |..-+++....+.+.. .+++++++.|++|+.|++.. ..+++++++++++|||+||+||||
T Consensus 695 e~t~tEdd~ne~dhdg~s~~rKsf~~~hl~~QLS~DLWyLfLglFIIcIcEGrki~~~~~pnFnvfaIlfEVVsaygtVg 774 (854)
T KOG1341|consen 695 EDTETEDDNNENDHDGNSKKRKSFLGDHLRRQLSFDLWYLFLGLFIICICEGRKIEDVDEPNFNVFAILFEVVSAYGTVG 774 (854)
T ss_pred cccccccCcccccccccchhhhhHHHHHHHHHhhhhHHHHHHhhheEEEeeccccCCCCCCCcchhhHHHHHHHhhceeE
Confidence 0 00 0 1001112333344443 44588899999999996654 346678999999999999999999
Q ss_pred CCCCccCcccCCCCCCCCCcccccccccChhhHHHHHHHHHhccCCccccCCCcc
Q 045809 491 FSTGYSCKRQLRPDSSCKDAWYGFVGRWSNQGKVILILVMFFGRIKKFNMKGGKA 545 (549)
Q Consensus 491 lS~G~~~~~~~~~~~~~~~~~~s~t~~l~~~~Klili~lM~iGRl~~~t~~gg~~ 545 (549)
||+|+ |+.|-|+++.+...+|+|++.+|+.||++.+|.+-..+
T Consensus 775 lslgy------------~~tn~SLsaqfttisklViiAl~irgr~RgLp~alDra 817 (854)
T KOG1341|consen 775 LSLGY------------PNTNESLSAQFTTISKLVIIALLIRGRHRGLPYALDRA 817 (854)
T ss_pred EEEec------------CCCCcchhhhhHHHHHHHHHHHHHhhccCCCCccccce
Confidence 99998 57778888999999999999999999999999866543
No 6
>PF02386 TrkH: Cation transport protein; InterPro: IPR003445 This family consists of various potassium transport proteins (Trk) and V-type sodium ATP synthase subunit J or translocating ATPase J (3.6.1.34 from EC). These proteins are involved in active sodium up-take utilizing ATP in the process. TrkH from Escherichia coli is a hydrophobic membrane protein and determines the specificity and kinetics of cation transport by the TrK system in this organism []. This protein interacts with TrkA and requires TrkE for transport activity.; GO: 0008324 cation transmembrane transporter activity, 0006812 cation transport, 0055085 transmembrane transport; PDB: 3PJZ_A.
Probab=100.00 E-value=6.3e-44 Score=375.42 Aligned_cols=322 Identities=26% Similarity=0.424 Sum_probs=161.8
Q ss_pred ccCchHhhHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHhhhccchhHHHHHHHhhhcccCccccccCCcccccccChh
Q 045809 200 KYNSVRVLVYVVLGYILVTHVVGSSLVALYTSLAPSAKQILKQKGLQIFTFSVFTTASTFSNCGFVPTNENMMVFKKNAL 279 (549)
Q Consensus 200 ~~~~~~~l~~~i~~~~~~i~~iGallL~l~~~~~~~~~~~~~~~~~~~~~~AiF~avSAf~naGFs~~~~sl~~y~~~~~ 279 (549)
+++..+.+.++++.++..+|.+|++.+.+++.....+.......+.+++|||+|||+||+|||||++.++|+++|++|+.
T Consensus 6 ~~~~~~~~~~~v~~~~~~~~~i~~i~l~~~~~~~~~~~~~~~~~~g~~~~~aifhs~Sa~~t~GFs~~~~sl~~f~~~~~ 85 (354)
T PF02386_consen 6 EYRALRRLIKIVPSYTFTIEIIGAIYLGLTFIYIYLYILAILHLGGMPLFDAIFHSMSAFSTGGFSPFSDSLAPFNSNPF 85 (354)
T ss_dssp -------------------SSSHHHHHHHHHHHHHHHHHHHHHHHT--SHHHHTTTHHHHTT----SSTTGGGSS---TT
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHhcCCceecCCceecccccHH
Confidence 47888888899999999999999999988765433322111112247899999999999999999999999999998899
Q ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHhhcchhhhHHHHhcchhhHHhhhcchhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 045809 280 LLLILFPQGLLGNTLYPSCLRFVIWVLKKITNREEFDYILRNSKEMIYRHLLSKAYSYFLAITVFGFIFVQLVLFCALEW 359 (549)
Q Consensus 280 v~~vi~~liilGGlgF~v~~~~i~~~~~r~~~~~~~~~ll~~~r~~~~~~l~~s~~tk~vl~~~~~l~~ig~il~~l~e~ 359 (549)
++++++++|++||+||+++++++.+..+|.. +++.+...++.+++.+-.+++...+.+.+.........+++.++.+||
T Consensus 86 i~~i~~~lmi~Gg~~F~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (354)
T PF02386_consen 86 IEIIIIILMILGGLGFPLYYRILRGRRYRIT-KREFSLFFKDHERRTFLLLFPGVVLLFLFELWNGLNLVGTIIFLILEW 164 (354)
T ss_dssp HHHHHHHHHHHHTS-HHHHHHHTTTST------T-HHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTT-------------
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHhccccccc-ccccccccccccceeEEEeehHHHHHHHHHHhcccccccccccccccc
Confidence 9999999999999999999997543222211 111222222211100101111111111111111122334555666777
Q ss_pred ccccCCCCCHHHHHHHHHHHHhccCCcccccccCCCchhHHHHHHHHHHhcCC---cceEEe-----------c----c-
Q 045809 360 DSEATDGLNFFEKLVASLFQVVNSRHTGESVFDISIISPAILVLFVVMMYLPP---YTSFWP-----------S----R- 420 (549)
Q Consensus 360 ~~~~~~~~~~~~~l~~slFqsvSarTAGFst~d~~~~s~~~~~lliiLMfIGg---stt~~~-----------~----r- 420 (549)
+++.+++.+..++..+++||+++.|||||++.|+++|++.++++++++||||| ||+... . |
T Consensus 165 ~~~~~~~~~~~~~~~~~f~~~s~~rTtGF~t~d~~~~~~~~~~l~~~lM~IGg~~gSTaGGiK~~r~~il~~~~~~~~~~ 244 (354)
T PF02386_consen 165 NSPTFGGLPFGSKRLSAFFQVSSLRTTGFSTVDISQWSPFTLLLLIILMFIGGSPGSTAGGIKITRFAILLKSIREIKRL 244 (354)
T ss_dssp ------SSHHHHHHHHHHHHHHTTTT----S---SS--THHHHHHHHHTTS-S-TTSS--SS-HHHHHHHHHHHHHHHHH
T ss_pred cccccCCCcHHHHHHHHHHHHhhcCCcccCccChhhCCHHHHHHHHHHHHhcCccccccCCcceehhhHHHhhHHHHHHH
Confidence 76667777888888888888888899999999999999999999999999988 454211 1 1
Q ss_pred ---ccccccccccCcccchhHHHHHHHHHHHHHHHHH--HHHHHHHcCCCCCCCCCcccHHHHHHHHhhcccCccCCCCc
Q 045809 421 ---NREGDSRNFKEKKNKKKTFVQNFIFSQLSYLVIF--IILVCITERDKMKKDPLNFNVLNVTIEVISAYGNVGFSTGY 495 (549)
Q Consensus 421 ---~~~~~~~~~~~r~i~~~~~~~a~~~~~l~~~~~~--~~~l~~~e~~~~~~~~~~~~~~~~lFEvvSA~gtvGlS~G~ 495 (549)
++.+..+. ++|+++++.++++..++.++.+++. ...+...+.+ ..+.+++||++||+||||+|+|.
T Consensus 245 ~~p~~~~~~~~-~~r~i~~~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~--------~~~~~~lfe~~Sa~gtvGls~G~ 315 (354)
T PF02386_consen 245 IHPGAVSPVRF-NGRRISEQTVRKAFAFFFLYFIIVFISTLLLSLDGLD--------FSFFDALFEVISAFGTVGLSLGI 315 (354)
T ss_dssp H-SSS-----S-SS---TTSHHHHHCCHHHHHHHHHHHHHHHHHHHSS---------H--HHHHHHHHHHCTT--S--SS
T ss_pred hcCCCccceee-cceeechhhhhhHHHHHHHHHHHHHHHHHHHHhcccc--------hHHHHHHHHHHHHhcCcCCCCCC
Confidence 11111122 5588999989988777766655443 3333333321 12699999999999999999998
Q ss_pred cCcccCCCCCCCCCcccccccccChhhHHHHHHHHHhccCCcccc---CCCccc
Q 045809 496 SCKRQLRPDSSCKDAWYGFVGRWSNQGKVILILVMFFGRIKKFNM---KGGKAW 546 (549)
Q Consensus 496 ~~~~~~~~~~~~~~~~~s~t~~l~~~~Klili~lM~iGRl~~~t~---~gg~~~ 546 (549)
+ +.+++ ..++.+|++++++|++||||++|+ ..+++|
T Consensus 316 ~------------~~~~s---~~~~~~K~vli~~M~~GRle~~~~l~~~~~~~w 354 (354)
T PF02386_consen 316 T------------TPNLS---FSGPFSKLVLIFLMLLGRLEILPVLLLFAPKFW 354 (354)
T ss_dssp S----------------S---SS-HHHHHHHHHHHHHHHTTTHHHHTTS-STT-
T ss_pred C------------CCCcc---chhhHHHHHHHHHHHHhCccHHHHHHHHHhhcc
Confidence 3 33444 344779999999999999999998 445555
No 7
>PRK05482 potassium-transporting ATPase subunit A; Provisional
Probab=99.96 E-value=8.5e-28 Score=258.93 Aligned_cols=239 Identities=16% Similarity=0.092 Sum_probs=183.7
Q ss_pred HHHHhhhcccCccccccC-Cccccccc-ChhHHHHHHHHHHHhcccHHHHHHHHHHHHHhhcchhhhHHHHhcchhhHHh
Q 045809 251 SVFTTASTFSNCGFVPTN-ENMMVFKK-NALLLLILFPQGLLGNTLYPSCLRFVIWVLKKITNREEFDYILRNSKEMIYR 328 (549)
Q Consensus 251 AiF~avSAf~naGFs~~~-~sl~~y~~-~~~v~~vi~~liilGGlgF~v~~~~i~~~~~r~~~~~~~~~ll~~~r~~~~~ 328 (549)
|-..|+=-..|-|=+.++ +|+.+|.+ |++++++++++|++||+||+++++.. . + |
T Consensus 221 As~~aIK~LGtNGGg~fg~NSl~pfenP~plvNlv~~~LIilgglGf~v~~g~~--~---------------~-~----- 277 (559)
T PRK05482 221 ASQEAIKQLGTNGGGFFGANSAHPFENPTPLSNLVEMLAILLIPAALVFTFGRM--V---------------G-D----- 277 (559)
T ss_pred HhHHHHHHhcCCCCCCCCCCCCccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHH--h---------------c-C-----
Confidence 334444434555556677 69999999 99999999999999999999998732 1 0 1
Q ss_pred hhcchhHHHHHHHHHHHHHHHHHHHHHHHhcc-cccCCCC----CHHHH------HHHHHHHHhccC-Ccc-cccccCCC
Q 045809 329 HLLSKAYSYFLAITVFGFIFVQLVLFCALEWD-SEATDGL----NFFEK------LVASLFQVVNSR-HTG-ESVFDISI 395 (549)
Q Consensus 329 ~l~~s~~tk~vl~~~~~l~~ig~il~~l~e~~-~~~~~~~----~~~~~------l~~slFqsvSar-TAG-Fst~d~~~ 395 (549)
.+|+|+++.++++++++++++++..||+ ||.++++ ++++| +..++||++++| ||| ||+. .++
T Consensus 278 ----~rh~kivl~~~~iL~i~g~~~~~~~E~~~np~l~~l~~~gn~egKE~RfG~~~salF~svTtrtTaG~fNsm-~ds 352 (559)
T PRK05482 278 ----RRQGWAILAAMLVLFLAGLAVTMWAELQGNPALAALGIDGNMEGKEVRFGIAASALFAVVTTAASTGAVNAM-HDS 352 (559)
T ss_pred ----cCceehhHHHHHHHHHHHHHHHHHHHccCCcchhhccCCCCcccchhhhhhHHHHHHHHHHhhhhcchHHHH-HHh
Confidence 1288999999999999999999999998 5666665 66677 999999999998 788 9999 999
Q ss_pred chhHHHHHHHHHHhcC-Cc---ce--------EE--------eccccccccccccCcccchhHHHHHHHHHHHHHHHH--
Q 045809 396 ISPAILVLFVVMMYLP-PY---TS--------FW--------PSRNREGDSRNFKEKKNKKKTFVQNFIFSQLSYLVI-- 453 (549)
Q Consensus 396 ~s~~~~~lliiLMfIG-gs---tt--------~~--------~~r~~~~~~~~~~~r~i~~~~~~~a~~~~~l~~~~~-- 453 (549)
++|.+.++.+++|+|| ++ |. ++ .+++ ++++ . .+|+++.++++++.++..+..+++
T Consensus 353 ltp~~~lv~m~lMfIG~~~pGGtGgGl~~~~tfaIL~vfi~glmvG-rtpe-~-~gRkI~~~eik~A~~vilv~~~lVl~ 429 (559)
T PRK05482 353 LTPLGGLVPLLNMQLGEVIFGGVGSGLYGMLVFVILAVFIAGLMVG-RTPE-Y-LGKKIEAREMKLAALAILVHPLLVLV 429 (559)
T ss_pred hccHHHHHHHHHHHhCCCCCccchHhHHHHHHHHHHHHHHHhHccC-CCCe-E-EccccCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998 33 31 11 1355 4443 4 899999999999988777665443
Q ss_pred HHHHHHHHcCCC-CCCCCCcccHHHHHHHHhhcccCccCCCC-ccCcccCCCCCCCCCcccccccccChhhHHHHHHHHH
Q 045809 454 FIILVCITERDK-MKKDPLNFNVLNVTIEVISAYGNVGFSTG-YSCKRQLRPDSSCKDAWYGFVGRWSNQGKVILILVMF 531 (549)
Q Consensus 454 ~~~~l~~~e~~~-~~~~~~~~~~~~~lFEvvSA~gtvGlS~G-~~~~~~~~~~~~~~~~~~s~t~~l~~~~Klili~lM~ 531 (549)
++.+.+..+... ...+|...++.+++||++||++|+|+|+| . +++ ++++|++++++||
T Consensus 430 ~taial~~~~~~~~~~n~g~hgfseiLyE~~SA~~tnGss~gGL-------------------t~~-t~~~niil~~~M~ 489 (559)
T PRK05482 430 GTALALATPAGRAGISNPGPHGFSEVLYAYTSAAANNGSAFAGL-------------------GAN-TPFWNLTLGIAML 489 (559)
T ss_pred HHHHHHHhccccccccCCCCCCHHHHHHHHHhhccccccccccC-------------------CCC-CHHHHHHHHHHHH
Confidence 332233233211 01122235899999999999999999995 6 345 9999999999999
Q ss_pred hccCCcccc
Q 045809 532 FGRIKKFNM 540 (549)
Q Consensus 532 iGRl~~~t~ 540 (549)
+||++|++.
T Consensus 490 iGR~Gpit~ 498 (559)
T PRK05482 490 LGRFLPIIP 498 (559)
T ss_pred HHHHHHHHH
Confidence 999999876
No 8
>TIGR00933 2a38 potassium uptake protein, TrkH family. The proteins of the Trk family are derived from Gram-negative and Gram-positive bacteria, yeast and wheat. The proteins of E. coli K12 TrkH and TrkG as well as several yeast proteins have been functionally characterized.The E. coli TrkH and TrkG proteins are complexed to two peripheral membrane proteins, TrkA, an NAD-binding protein, and TrkE, an ATP-binding protein. This complex forms the potassium uptake system.
Probab=99.91 E-value=2.3e-23 Score=222.13 Aligned_cols=254 Identities=18% Similarity=0.152 Sum_probs=168.3
Q ss_pred hhHHHHHHHhhhcccCccccccCCcccccccChhHHHHHHHHHHHhcccHHHHHHHHHHHHHhhcc--hhhhHHHHhcc-
Q 045809 246 QIFTFSVFTTASTFSNCGFVPTNENMMVFKKNALLLLILFPQGLLGNTLYPSCLRFVIWVLKKITN--REEFDYILRNS- 322 (549)
Q Consensus 246 ~~~~~AiF~avSAf~naGFs~~~~sl~~y~~~~~v~~vi~~liilGGlgF~v~~~~i~~~~~r~~~--~~~~~~ll~~~- 322 (549)
.+++||+|+|+||+||+|+++.|+. ..+ ++.++++.++++++||+|++++...+....+++.+ ++.++..-.++
T Consensus 14 ~s~~dA~FeavSa~ttTGltv~~~~-~~~--~~~~~~~r~~l~~iGGlG~~v~~~~~l~~~g~~~~~~~~l~~~e~~~~~ 90 (390)
T TIGR00933 14 LSFIDALFTATSAVTTTGLTVLDTL-ESL--PKAGLFLRSLLQQIGGLGFMVLAVAILILLGKKISLGARLYLAEALGPL 90 (390)
T ss_pred CCHHHHHHhhHhhcccCCCeEccCh-hhc--CHhHHHHHHHHHHHcChHHHHHHHHHHHHHccccCHHHHHHHHHhCCCC
Confidence 4799999999999999999999852 223 68899999999999999999998865444333111 11111100111
Q ss_pred hhhH-HhhhcchhHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCHHHHHHHHHHHHhcc-CCcccccccCCC---c-
Q 045809 323 KEMI-YRHLLSKAYSYFLAITVFGFIFVQLVLFCALEWDSEATDGLNFFEKLVASLFQVVNS-RHTGESVFDISI---I- 396 (549)
Q Consensus 323 r~~~-~~~l~~s~~tk~vl~~~~~l~~ig~il~~l~e~~~~~~~~~~~~~~l~~slFqsvSa-rTAGFst~d~~~---~- 396 (549)
+..+ .+++ +...|.++.+.+++.+++++.++..+ + +++++|+||++|+ +|+||++.|.+. .
T Consensus 91 ~~~~~~~~i--~~~~~~~~~iy~~lt~l~~~~~~~~g----------~-~~~~~Aif~avSa~~taGFs~~~~~~~~~~~ 157 (390)
T TIGR00933 91 SDDKLLPLI--KNTAKFIFVIYLLGTILLAVRFVLTG----------W-MPLFDAIFHSISAFNNGGFSTHSDSSIGYFH 157 (390)
T ss_pred CcccHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhc----------c-hHHHHHHHHHHHHHhcCCcCCCCCcchhhcc
Confidence 1000 1122 56778888888877777777665432 1 5799999999999 999999999742 2
Q ss_pred hhHHHHHHHHHHhcCCc--ceEEecc--ccccccccccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCc
Q 045809 397 SPAILVLFVVMMYLPPY--TSFWPSR--NREGDSRNFKEKKNKKKTFVQNFIFSQLSYLVIFIILVCITERDKMKKDPLN 472 (549)
Q Consensus 397 s~~~~~lliiLMfIGgs--tt~~~~r--~~~~~~~~~~~r~i~~~~~~~a~~~~~l~~~~~~~~~l~~~e~~~~~~~~~~ 472 (549)
++..+++.+++|++||. +.+..+. .++. .++..++... .....+.++.++.+.+.+.|.++...+...
T Consensus 158 ~~~i~~v~~~lm~iGg~gF~v~~~~~~~~~~~------~~~l~~~~~~--~~~~~~~l~~~~~i~~~l~~~~~~~~~~~~ 229 (390)
T TIGR00933 158 DPSVNLVIAFLIILGGLGFTVHYDVYLLLRKR------VFKLSLDTKV--RLFVTFLLLAIGFILFLLLERGNTLYSYSF 229 (390)
T ss_pred ChHHHHHHHHHHHHHhcCHHHHHHHHHHcccC------cceeecCccH--HHHHHHHHHHHHHHHHHHHHHcccccCCCH
Confidence 45689999999999983 2221111 1110 0112111111 122222233344455555564321111112
Q ss_pred ccHHHHHHHHhhcccCccCCCCccCcccCCCCCCCCCcccccccccChhhHHHHHHHHHhccCCccccCCC
Q 045809 473 FNVLNVTIEVISAYGNVGFSTGYSCKRQLRPDSSCKDAWYGFVGRWSNQGKVILILVMFFGRIKKFNMKGG 543 (549)
Q Consensus 473 ~~~~~~lFEvvSA~gtvGlS~G~~~~~~~~~~~~~~~~~~s~t~~l~~~~Klili~lM~iGRl~~~t~~gg 543 (549)
.+..++.||++|+.+|+|+++++ .++|++.+|++++++|++|. .+.+++||
T Consensus 230 ~~~~~~~f~~~s~~~T~Gfst~d-------------------~~~~~~~~~lll~~lMfIGg-~~gSTaGG 280 (390)
T TIGR00933 230 GALLLSAFFQSSTLRTAGFSTID-------------------FAALPTATLVLLLLLMFIGG-CSGSTAGG 280 (390)
T ss_pred HHHHHHHHHHHhhccCCCccccC-------------------hhhcCHHHHHHHHHHHHHcC-CCcccCCc
Confidence 46899999999999999999986 35899999999999999999 88999887
No 9
>TIGR00934 2a38euk potassium uptake protein, Trk family. The proteins of the Trk family are derived from Gram-negative and Gram-positive bacteria, yeast and wheat. The proteins of E. coli K12 TrkH and TrkG as well as several yeast proteins have been functionally characterized.The E. coli TrkH and TrkG proteins are complexed to two peripheral membrane proteins, TrkA, an NAD-binding protein, and TrkE, an ATP-binding protein. This complex forms the potassium uptake system. This family is specific for the eukaryotic Trk system.
Probab=99.72 E-value=7.8e-17 Score=179.52 Aligned_cols=298 Identities=14% Similarity=0.105 Sum_probs=183.0
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCCC-------CCCC-cccchhheecccccccccceee--CCcc--ChHHHHHHHHH
Q 045809 42 WIQLSYFISISSVGYLILRVSKPRDSS-------FINP-KNIDVFFTSVSAMTGSSMSTVE--MEVF--SNFQLIIMTIL 109 (549)
Q Consensus 42 ~i~~~~f~~i~~iG~~lL~l~~~~~~~-------~~~~-s~~DAlF~avSAvt~TGLs~vd--~~~~--s~~gq~vl~~L 109 (549)
.++..||+.+-++|.+.|.. ...... ..++ .+.-|+|+|+||+|++|++..+ +..| +.+-++++++|
T Consensus 453 ~Iv~~Y~~~~~llG~i~l~~-wi~~~~~~~~~l~~~gin~~W~aiFhAVSAFnNAGFsL~~dSM~~F~~~~~vllvm~~L 531 (800)
T TIGR00934 453 SIVLVYFLGFNILGFVLLLP-WINHVKTYSEVVRSKGVSPTWWGFFTAMSAFANLGLTLTPESMVSFNKNSYLLLLMIWF 531 (800)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHhcCccHHHHHhhcCccHHHHHHHHHHHHHhcCCCCcCCCcchhhccCccHHHHHHHH
Confidence 67778999998999887764 222110 1122 4778999999999999999998 4455 57999999999
Q ss_pred HHHhhhHHHHHHHHHHh--hccchhh-hhhhcccCCCCCCCCCCCCCCCCCCCCcccccchhhcccccccccCCCCCCCc
Q 045809 110 MFVGGEVFISMFGLHAR--SKFYSLN-QLFENRINPNLTPSSSSSSSSSSSENSTEFTDQIELGIVSHSYITNEEPNNGL 186 (549)
Q Consensus 110 iqiGGlg~~s~~~l~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (549)
|.+||+||.++.-++.. .|+..+. +.. +.+ ..+ ++ +.++..
T Consensus 532 Ii~GntGFPVllrliiw~~~k~~~~~s~~~-----e~l--------------------~fl-----l~----~pRr~~-- 575 (800)
T TIGR00934 532 IIIGNTGFPIFLRLIIWILFKISPDLSKRK-----ESL--------------------GFL-----LD----HPRRCF-- 575 (800)
T ss_pred HHHcccchHHHHHHHHHHHhhccccccchh-----hhh--------------------hhh-----cc----Ccccee--
Confidence 99999999999877652 2221100 000 000 000 00 000000
Q ss_pred ccccccCCCCcccccCchHhhHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHhhhcc-chhHHHHHHHhhhcccCcccc
Q 045809 187 ENEHRMSSNDDNLKYNSVRVLVYVVLGYILVTHVVGSSLVALYTSLAPSAKQILKQKG-LQIFTFSVFTTASTFSNCGFV 265 (549)
Q Consensus 187 ~~~~~~~~~~~l~~~~~~~~l~~~i~~~~~~i~~iGallL~l~~~~~~~~~~~~~~~~-~~~~~~AiF~avSAf~naGFs 265 (549)
.-+ .. +...+.++.+++++.++|++++++.-...+. +++.. ...+.+|+|+|+++ -+|||+
T Consensus 576 ---------s~L--fp--s~~T~ill~tt~iL~~ig~ilf~lLE~nn~t----l~~lp~g~Ril~aLFQSVst-RTAGFn 637 (800)
T TIGR00934 576 ---------TLL--FP--SGATWWLFFTLVGLNAIDLILFIILDWGSSV----VDGLSKGIKVLNGLFQSVST-RTAGFT 637 (800)
T ss_pred ---------ccc--cc--ccchhhHHHHHHHHHHHHHHHHHHHhcCccc----cccCCHHHHHHHHHHHhccc-cccccc
Confidence 001 11 2344667788888889998887654222221 22222 26899999999999 599999
Q ss_pred ccCCcccccccChhHHHHHHHHHHHhcccHHH------HHH-H--HHHHHHhhcchhhhHHHHhcchhhHHhhhcchhHH
Q 045809 266 PTNENMMVFKKNALLLLILFPQGLLGNTLYPS------CLR-F--VIWVLKKITNREEFDYILRNSKEMIYRHLLSKAYS 336 (549)
Q Consensus 266 ~~~~sl~~y~~~~~v~~vi~~liilGGlgF~v------~~~-~--i~~~~~r~~~~~~~~~ll~~~r~~~~~~l~~s~~t 336 (549)
++|-+. -++.++++.+++|++|+-.-.. ++. . -+|.. + ++++.... ..| + ++..+.
T Consensus 638 tVdls~----Lspatlvl~iiLMyIGa~PtaggIK~TTvyee~sLgi~~~-~--g~~~~~~~--~~r-----s-i~~~~i 702 (800)
T TIGR00934 638 VVDLSQ----LHPAIQVSYMLMMYVSVLPLAISIRRTNVYEEQSLGLYNE-E--NEEHEGES--STK-----S-FIGAHL 702 (800)
T ss_pred ccchHh----cChhHHHHHHHHHHhccCCccceeeceeeeheeheeeeec-c--CCcccccc--ccc-----c-ccHHHH
Confidence 998753 2578999999999999854100 000 0 00000 0 01111000 011 1 113333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccccCCC-CCHHHHHHHHHHHHhcc-CCccccccc-------CCCchhHHHHHHHHH
Q 045809 337 YFLAITVFGFIFVQLVLFCALEWDSEATDG-LNFFEKLVASLFQVVNS-RHTGESVFD-------ISIISPAILVLFVVM 407 (549)
Q Consensus 337 k~vl~~~~~l~~ig~il~~l~e~~~~~~~~-~~~~~~l~~slFqsvSa-rTAGFst~d-------~~~~s~~~~~lliiL 407 (549)
+--+...+..++++.+++++.|-.+ +.+ .+....+.+.+|++||| .|.|+++.- .+.|++.+|++++++
T Consensus 703 rrqLs~dlw~I~l~~flI~I~E~~~--l~~~~~~~fs~f~ILFEVVSAyGTVGLSlG~p~~~~SfSg~ls~~sKLVII~v 780 (800)
T TIGR00934 703 RRQLSFDLWYIFLGLFIICICEGRK--IQDPDPPNFNVFNILFEVVSAYGTVGLSLGYSCSNYSFSGQFTTLSKLVIIAM 780 (800)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCcc--ccccccccccHHHHHhhhhhhccceeecCCCCCcccccCCCCCcchHHHHhHH
Confidence 3334444556667777777777432 211 23334688999999999 899999973 578999999999999
Q ss_pred HhcC
Q 045809 408 MYLP 411 (549)
Q Consensus 408 MfIG 411 (549)
||+|
T Consensus 781 M~~G 784 (800)
T TIGR00934 781 LIRG 784 (800)
T ss_pred HHcc
Confidence 9996
No 10
>PRK10750 potassium transporter; Provisional
Probab=99.65 E-value=3.6e-15 Score=162.42 Aligned_cols=248 Identities=15% Similarity=0.148 Sum_probs=160.0
Q ss_pred hhHHHHHHHhhhcccCccccccCCcccccccChhHHHHHHHHHHHhcccHHHHHHHHHHHHHhhcchhhhHHHHhcc---
Q 045809 246 QIFTFSVFTTASTFSNCGFVPTNENMMVFKKNALLLLILFPQGLLGNTLYPSCLRFVIWVLKKITNREEFDYILRNS--- 322 (549)
Q Consensus 246 ~~~~~AiF~avSAf~naGFs~~~~sl~~y~~~~~v~~vi~~liilGGlgF~v~~~~i~~~~~r~~~~~~~~~ll~~~--- 322 (549)
.++-||+|.|+|++.|+|.+..++ ++. ..+.+++-=..+-.+||+|+.++.-.+.-..+ .-..+-.+.....|
T Consensus 96 ~s~~dA~FEs~Sg~TTTGaTvl~~-~~~--~p~sil~WRs~~qWiGGlGiivl~vail~~lg-~~~~~l~~aE~~g~~~~ 171 (483)
T PRK10750 96 LTITDAFFESFSGLTTTGATTLVG-LDS--LPHAILFYRQMLQWFGGMGIIVLAVAILPILG-VGGMQLYRAEMPGPLKD 171 (483)
T ss_pred CCHHHHHHHHHHhccccchhccCC-hhh--cCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCchheeecccCCCCcc
Confidence 368899999999999999999874 322 23567777888899999999888554322211 00010000000011
Q ss_pred hhhHHhhhcchhHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCHHHHHHHHHHHHhcc-CCcccccccCC--Cc-hh
Q 045809 323 KEMIYRHLLSKAYSYFLAITVFGFIFVQLVLFCALEWDSEATDGLNFFEKLVASLFQVVNS-RHTGESVFDIS--II-SP 398 (549)
Q Consensus 323 r~~~~~~l~~s~~tk~vl~~~~~l~~ig~il~~l~e~~~~~~~~~~~~~~l~~slFqsvSa-rTAGFst~d~~--~~-s~ 398 (549)
++..+ +. ....|.+..+++.+.+++++++++ .+++ +++|+||++|+ .|+||++.|-+ .+ ++
T Consensus 172 ~~~~p-~i--~~ta~~l~~iY~~lT~~~~~ll~~--------~Gm~----~fdAi~ha~saisTgGFs~~~~si~~~~~~ 236 (483)
T PRK10750 172 NKMRP-RI--AETAKTLWLIYVLLTVACALALWF--------AGMD----AFDAIGHSFSTIAIGGFSTHDASIGYFDSP 236 (483)
T ss_pred cccch-hH--HHHHHHHHHHHHHHHHHHHHHHHH--------cCCc----HHHHHHHHHHHHhccCcCCCccccccccCH
Confidence 11101 11 345788888888898888877653 3344 77889999999 99999999855 22 46
Q ss_pred HHHHHHHHHHhcCCc--ceEE-eccccccccccccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCcccH
Q 045809 399 AILVLFVVMMYLPPY--TSFW-PSRNREGDSRNFKEKKNKKKTFVQNFIFSQLSYLVIFIILVCITERDKMKKDPLNFNV 475 (549)
Q Consensus 399 ~~~~lliiLMfIGgs--tt~~-~~r~~~~~~~~~~~r~i~~~~~~~a~~~~~l~~~~~~~~~l~~~e~~~~~~~~~~~~~ 475 (549)
...++.+++|++||- +... .+|+++. ++..++. ..|.++...+...+++.+.+...|.. ++....+
T Consensus 237 ~i~~v~~~~milgg~~F~l~~~~~~~~~~------~~~~~~~-e~r~~l~~~~~~~~~~~~~l~~~~~~----~~~~~~l 305 (483)
T PRK10750 237 TINTIIAIFLLISGCNYGLHFSLLSGRSL------KVYWRDP-EFRMFIGVQLTLVVICTLVLWFHNVY----SSALMTL 305 (483)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHhCccc------ccccCCH-HHHHHHHHHHHHHHHHHHHHHHHhcc----cCHHHHH
Confidence 688999999999882 1111 1333210 1111222 23444433333333333333333421 1122468
Q ss_pred HHHHHHHhhcccCccCCCCccCcccCCCCCCCCCcccccccccChhhHHHHHHHHHhccCCccccCCC
Q 045809 476 LNVTIEVISAYGNVGFSTGYSCKRQLRPDSSCKDAWYGFVGRWSNQGKVILILVMFFGRIKKFNMKGG 543 (549)
Q Consensus 476 ~~~lFEvvSA~gtvGlS~G~~~~~~~~~~~~~~~~~~s~t~~l~~~~Klili~lM~iGRl~~~t~~gg 543 (549)
.+++|+++|+..|.|+++.+ -++|++.+|++++++||+|. ++.+++||
T Consensus 306 ~~s~Fq~vS~~tTtGF~t~d-------------------~~~w~~~~~~ll~~lMfIGG-~~GSTaGG 353 (483)
T PRK10750 306 NQAFFQVVSMATTAGFTTDS-------------------IARWPLFLPVLLLCSAFIGG-CAGSTGGG 353 (483)
T ss_pred HHHHHeeeecccCCCCCCCC-------------------hhhccHHHHHHHHHHHHHcC-CcccCccc
Confidence 89999999999999999875 24899999999999999999 89999887
No 11
>COG0168 TrkG Trk-type K+ transport systems, membrane components [Inorganic ion transport and metabolism]
Probab=99.60 E-value=4.9e-14 Score=154.04 Aligned_cols=245 Identities=18% Similarity=0.233 Sum_probs=148.0
Q ss_pred CCcccchhheecccccccccceee--CCccC--hHHHHHHHHHHHHhhhHHHHHHHHHHhhccchhhhhhhcccCCCCCC
Q 045809 71 NPKNIDVFFTSVSAMTGSSMSTVE--MEVFS--NFQLIIMTILMFVGGEVFISMFGLHARSKFYSLNQLFENRINPNLTP 146 (549)
Q Consensus 71 ~~s~~DAlF~avSAvt~TGLs~vd--~~~~s--~~gq~vl~~LiqiGGlg~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~ 146 (549)
++++.||+|||+||+|+.|+++-| +.+|+ +.-|+++.++|.+||++|.....++.++| .++ +..
T Consensus 196 gm~~~dAi~hs~Sa~~ngGFS~~~~Si~~f~~~~~i~~i~~~liI~GgigF~v~~~~~~~~k-~~~-~l~---------- 263 (499)
T COG0168 196 GMPLFDAIFHSMSAFNNGGFSTHDASIGYFNGSPLINLIITILIILGGIGFPVHYRLLIWIK-SLK-FLS---------- 263 (499)
T ss_pred cCCHHHHHHHHHHHhhcCCCCCCcchhhhcccChhHHHHHHHHHHHhcCChHHHHHHHHhhh-hhh-hhh----------
Confidence 367999999999999999999997 46774 79999999999999999999988876432 111 100
Q ss_pred CCCCCCCCCCCCCCcccccchhhcccccccccCCCCCCCcccccccCCCCcccccCchHhhHHHHHHHHHHHHHHHHHHH
Q 045809 147 SSSSSSSSSSSENSTEFTDQIELGIVSHSYITNEEPNNGLENEHRMSSNDDNLKYNSVRVLVYVVLGYILVTHVVGSSLV 226 (549)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~i~~~~~~i~~iGallL 226 (549)
+ +..++.. .++.....+.+.+
T Consensus 264 ---------------------------~--------------------------d~k~~~~------~~~~~~~~~~l~~ 284 (499)
T COG0168 264 ---------------------------L--------------------------DPKLRFT------LTLLLLATGLLAL 284 (499)
T ss_pred ---------------------------c--------------------------ChhHHHH------HHHHHHHHHHHHH
Confidence 0 1112222 2222223333332
Q ss_pred HHHHhhcchhHHHhhhccchhHHHHHHHhhhcccCccccccCCcccccc-cChhHHHHHHHHHHHhcc------c-----
Q 045809 227 ALYTSLAPSAKQILKQKGLQIFTFSVFTTASTFSNCGFVPTNENMMVFK-KNALLLLILFPQGLLGNT------L----- 294 (549)
Q Consensus 227 ~l~~~~~~~~~~~~~~~~~~~~~~AiF~avSAf~naGFs~~~~sl~~y~-~~~~v~~vi~~liilGGl------g----- 294 (549)
.+.....+... . .-.+++-+++|+++|++.++|++..|-+..++. ..+..+++++++|++||- |
T Consensus 285 ~~~~~~~~~~~--~--~~~~~~~~~~f~~vs~~f~tg~trtgf~~vd~~~~~~~~~~~~~~~MfIGg~~gSTaGGIK~~r 360 (499)
T COG0168 285 FLLELNNPDGG--Y--SFFLSLRDAFFQSVSAIFQTGFTRTGFNTVDLSQWPPATLVLLMLLMFIGGSPGSTAGGIKTTR 360 (499)
T ss_pred HHHHHhccccc--c--hhHHHHHHHHHhHhHHheecccccCCCcccchhhcChHHHHHHHHHHHHcCCccccccchHHHH
Confidence 22221111100 0 001468899999999999999887754433322 357889999999999985 2
Q ss_pred HHHHHHHHHHHHHhhcchhhhHHHHhcch-----hhHHhhhcch--hHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCC
Q 045809 295 YPSCLRFVIWVLKKITNREEFDYILRNSK-----EMIYRHLLSK--AYSYFLAITVFGFIFVQLVLFCALEWDSEATDGL 367 (549)
Q Consensus 295 F~v~~~~i~~~~~r~~~~~~~~~ll~~~r-----~~~~~~l~~s--~~tk~vl~~~~~l~~ig~il~~l~e~~~~~~~~~ 367 (549)
|.+....+.+..+|. .||+ |...|.+-++ .....++...+.+++++.+++...+.
T Consensus 361 ~~il~~~~~~~l~~~----------~~p~~v~~~k~~~r~i~~~~i~~~~~~~~l~~~~~~i~~~~l~~~~~-------- 422 (499)
T COG0168 361 FAVLLKALKRELRRL----------GHPNAVISVKIFGRAIDEDTIRKALAFFFLYLLILIIGALILILTGY-------- 422 (499)
T ss_pred HHHHHHHHHHHHHHh----------cCcccceeeEEcCccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--------
Confidence 333333322222111 1222 1101111111 12333444444455555554443321
Q ss_pred CHHHHHHHHHHHHhcc-CCcccccccCCC------chhHHHHHHHHHHhcC
Q 045809 368 NFFEKLVASLFQVVNS-RHTGESVFDISI------ISPAILVLFVVMMYLP 411 (549)
Q Consensus 368 ~~~~~l~~slFqsvSa-rTAGFst~d~~~------~s~~~~~lliiLMfIG 411 (549)
+ .+.+++|+++|| .|.|-+....+. +++.+|++++++|++|
T Consensus 423 ~---~~~~~lfEv~SA~gtVGlSlG~t~~~~~~~~~~~~~K~vli~~M~~G 470 (499)
T COG0168 423 D---PFIDALFEVVSAFGTVGLSLGITGDLASNFALPPLAKLVLIALMLIG 470 (499)
T ss_pred c---cHHHHHHHHHHHhhcCCCCCCCCCCCccccccCchHHHHHHHHHHhh
Confidence 1 588999999999 899998776643 4555699999999997
No 12
>PF02386 TrkH: Cation transport protein; InterPro: IPR003445 This family consists of various potassium transport proteins (Trk) and V-type sodium ATP synthase subunit J or translocating ATPase J (3.6.1.34 from EC). These proteins are involved in active sodium up-take utilizing ATP in the process. TrkH from Escherichia coli is a hydrophobic membrane protein and determines the specificity and kinetics of cation transport by the TrK system in this organism []. This protein interacts with TrkA and requires TrkE for transport activity.; GO: 0008324 cation transmembrane transporter activity, 0006812 cation transport, 0055085 transmembrane transport; PDB: 3PJZ_A.
Probab=99.55 E-value=3.6e-14 Score=149.78 Aligned_cols=55 Identities=29% Similarity=0.439 Sum_probs=41.7
Q ss_pred CCcccchhheecccccccccceee--CCccC--hHHHHHHHHHHHHhhhHHHHHHHHHH
Q 045809 71 NPKNIDVFFTSVSAMTGSSMSTVE--MEVFS--NFQLIIMTILMFVGGEVFISMFGLHA 125 (549)
Q Consensus 71 ~~s~~DAlF~avSAvt~TGLs~vd--~~~~s--~~gq~vl~~LiqiGGlg~~s~~~l~~ 125 (549)
+.++.||+|+|+||+|+.|+++.| +..|+ ...|++++++|.+||++|.....++.
T Consensus 51 g~~~~~aifhs~Sa~~t~GFs~~~~sl~~f~~~~~i~~i~~~lmi~Gg~~F~~~~~~~~ 109 (354)
T PF02386_consen 51 GMPLFDAIFHSMSAFSTGGFSPFSDSLAPFNSNPFIEIIIIILMILGGLGFPLYYRILR 109 (354)
T ss_dssp T--SHHHHTTTHHHHTT----SSTTGGGSS---TTHHHHHHHHHHHHTS-HHHHHHHTT
T ss_pred CCcHHHHHHHHHHHHhcCCceecCCceecccccHHHHHHHHHHHHHhcCCHHHHHHHHh
Confidence 467999999999999999999998 46775 59999999999999999998777764
No 13
>PRK05482 potassium-transporting ATPase subunit A; Provisional
Probab=98.67 E-value=4.4e-07 Score=99.29 Aligned_cols=191 Identities=13% Similarity=0.156 Sum_probs=101.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhh-cchhHH-----Hhhhcc--chhHHHHHHHhhhcccCcc-ccccCCcccccccChh
Q 045809 209 YVVLGYILVTHVVGSSLVALYTSL-APSAKQ-----ILKQKG--LQIFTFSVFTTASTFSNCG-FVPTNENMMVFKKNAL 279 (549)
Q Consensus 209 ~~i~~~~~~i~~iGallL~l~~~~-~~~~~~-----~~~~~~--~~~~~~AiF~avSAf~naG-Fs~~~~sl~~y~~~~~ 279 (549)
|+++..++++-++|+++.++..+. +|.... .++++. ...+..|+|+++++-.++| |+..-+|+ ++.
T Consensus 282 kivl~~~~iL~i~g~~~~~~~E~~~np~l~~l~~~gn~egKE~RfG~~~salF~svTtrtTaG~fNsm~dsl-----tp~ 356 (559)
T PRK05482 282 WAILAAMLVLFLAGLAVTMWAELQGNPALAALGIDGNMEGKEVRFGIAASALFAVVTTAASTGAVNAMHDSL-----TPL 356 (559)
T ss_pred ehhHHHHHHHHHHHHHHHHHHHccCCcchhhccCCCCcccchhhhhhHHHHHHHHHHhhhhcchHHHHHHhh-----ccH
Confidence 445566667777777776544332 221110 000000 0237899999999985666 97764443 467
Q ss_pred HHHHHHHHHHHhc-c------cHHH--HHHHHHHHHHhhcchhhhHHHHhcchhhHHhhhcchhHHHHHHHHHHHHHHHH
Q 045809 280 LLLILFPQGLLGN-T------LYPS--CLRFVIWVLKKITNREEFDYILRNSKEMIYRHLLSKAYSYFLAITVFGFIFVQ 350 (549)
Q Consensus 280 v~~vi~~liilGG-l------gF~v--~~~~i~~~~~r~~~~~~~~~ll~~~r~~~~~~l~~s~~tk~vl~~~~~l~~ig 350 (549)
..++.+++|++|+ . |.-. .+.++........++++.++. .||...+.. ...-.++.+...+++++
T Consensus 357 ~~lv~m~lMfIG~~~pGGtGgGl~~~~tfaIL~vfi~glmvGrtpe~~---gRkI~~~ei---k~A~~vilv~~~lVl~~ 430 (559)
T PRK05482 357 GGLVPLLNMQLGEVIFGGVGSGLYGMLVFVILAVFIAGLMVGRTPEYL---GKKIEAREM---KLAALAILVHPLLVLVG 430 (559)
T ss_pred HHHHHHHHHHhCCCCCccchHhHHHHHHHHHHHHHHHhHccCCCCeEE---ccccCHHHH---HHHHHHHHHHHHHHHHH
Confidence 8889999999983 2 2222 111111111111122222211 111111111 11222333333444555
Q ss_pred HHHHHHHhcccccCCCCCHHHHHHHHHHHHhcc-CCcccccccCCCchhHHHHHHHHHHhcC
Q 045809 351 LVLFCALEWDSEATDGLNFFEKLVASLFQVVNS-RHTGESVFDISIISPAILVLFVVMMYLP 411 (549)
Q Consensus 351 ~il~~l~e~~~~~~~~~~~~~~l~~slFqsvSa-rTAGFst~d~~~~s~~~~~lliiLMfIG 411 (549)
+.+....+.......+ +-...+.+.+|+.+|+ .|.|-+..+++.-++..+++++++||+|
T Consensus 431 taial~~~~~~~~~~n-~g~hgfseiLyE~~SA~~tnGss~gGLt~~t~~~niil~~~M~iG 491 (559)
T PRK05482 431 TALALATPAGRAGISN-PGPHGFSEVLYAYTSAAANNGSAFAGLGANTPFWNLTLGIAMLLG 491 (559)
T ss_pred HHHHHHhccccccccC-CCCCCHHHHHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHH
Confidence 4333333431100111 1013577889999999 8999998766666999999999999997
No 14
>KOG1341 consensus Na+/K+ transporter [Inorganic ion transport and metabolism]
Probab=97.86 E-value=2.6e-06 Score=92.31 Aligned_cols=68 Identities=24% Similarity=0.367 Sum_probs=58.6
Q ss_pred hcccCHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCcccchhheecccccccccceeeCCccChHHHHHHHHH
Q 045809 35 VLKVNPLWIQLSYFISISSVGYLILRVSKPRDSSFINPKNIDVFFTSVSAMTGSSMSTVEMEVFSNFQLIIMTIL 109 (549)
Q Consensus 35 ~~~~~p~~i~~~~f~~i~~iG~~lL~l~~~~~~~~~~~s~~DAlF~avSAvt~TGLs~vd~~~~s~~gq~vl~~L 109 (549)
....|+..+|.+|.+.+.+|++++|+- .....|+||+|.|.+|.|.|||++||+.+++.+||+|+.+.
T Consensus 23 ~v~P~Fiavhy~yiIsltii~SilLy~-------~~ntryIDaLfLAsga~TQ~GL~tvdln~lsiyQQivly~~ 90 (854)
T KOG1341|consen 23 YVFPNFIAVHYIYIISLTIICSILLYP-------SGNTRYIDALFLASGACTQTGLNTVDLNQLSIYQQIVLYLF 90 (854)
T ss_pred eeccceeeeeeeeeehHhhhheeeEec-------CCChhhHHHHHHhccccccCCcccccchhhhHHHHHHhhhe
Confidence 334556778999999999999999993 23468999999999999999999999999999999988654
No 15
>PF03814 KdpA: Potassium-transporting ATPase A subunit; InterPro: IPR004623 Kdp is a high affinity ATP-driven K+ transport system in Escherichia coli. It is composed of three membrane-bound subunits, KdpA, KdpB and KdpC and one small peptide, KdpF. KdpA is the K+-transporting subunit of this complex. During assembly of the complex, KdpA and KdpC bind to each other. This interaction is thought to stabilise the complex. Data indicates that KdpC might connect the KdpA, the K+-transporting subunit, to KdpB, the ATP-hydrolysing (energy providing) subunit [].; GO: 0008556 potassium-transporting ATPase activity, 0006813 potassium ion transport, 0005886 plasma membrane
Probab=97.56 E-value=0.18 Score=55.61 Aligned_cols=398 Identities=16% Similarity=0.106 Sum_probs=200.9
Q ss_pred HHhHHHHHHHHHHHhhcccC---HHHHHHHHHHHHHHHHH----HHhhcC---CCCCCCCCCCcccchhheecccccccc
Q 045809 20 HQCFLGLFLSSIRFLVLKVN---PLWIQLSYFISISSVGY----LILRVS---KPRDSSFINPKNIDVFFTSVSAMTGSS 89 (549)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~---p~~i~~~~f~~i~~iG~----~lL~l~---~~~~~~~~~~s~~DAlF~avSAvt~TG 89 (549)
.+.+.-+=+.+||......+ ..+--...+++.-++|. ++|++. |.-.....++++--|+=||+|=+|+|-
T Consensus 31 ~~~~~pvE~~iyr~~Gvd~~~em~Wk~Ya~alL~fN~~~~l~~~~ll~~Q~~LPlNP~~~~~~s~dlAfNTAiSFvTNTN 110 (552)
T PF03814_consen 31 DPILGPVERLIYRLCGVDPEEEMSWKQYALALLAFNLIGFLLLYLLLRLQGWLPLNPQGFPGMSPDLAFNTAISFVTNTN 110 (552)
T ss_pred cccccHHHHHHHHHhCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccCCCCCCcchhhhhhhhhhccCc
Confidence 34455566677777644211 12222233333333343 333331 221111345788889999999999999
Q ss_pred cceeeC-CccChHHHHH-HHHHHHHhhh-HHHHHHHHHHhhccchhhhhhhcccCCCCCCCCCCCCCCCCCCCCcccccc
Q 045809 90 MSTVEM-EVFSNFQLII-MTILMFVGGE-VFISMFGLHARSKFYSLNQLFENRINPNLTPSSSSSSSSSSSENSTEFTDQ 166 (549)
Q Consensus 90 Ls~vd~-~~~s~~gq~v-l~~LiqiGGl-g~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (549)
.+--.= +++|.+-|.. +..++.+--- |+.+...++ | ++.+++
T Consensus 111 wQ~YsGEstlSylsQm~gLtvqnFvSAAtGiAv~~Ali-R-g~~~~~--------------------------------- 155 (552)
T PF03814_consen 111 WQHYSGESTLSYLSQMAGLTVQNFVSAATGIAVAIALI-R-GFARKE--------------------------------- 155 (552)
T ss_pred ccccCCcchHHHHHHHHHHHHHHHHhHHHHHHHHHHHH-H-HHHhcc---------------------------------
Confidence 888774 4677766655 5555555544 444444332 2 221110
Q ss_pred hhhcccccccccCCCCCCCcccccccCCCCcccccCchHhhHHHHHHHHHHHHHHHHHHHHHHHhhcchhHH------Hh
Q 045809 167 IELGIVSHSYITNEEPNNGLENEHRMSSNDDNLKYNSVRVLVYVVLGYILVTHVVGSSLVALYTSLAPSAKQ------IL 240 (549)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~i~~~~~~i~~iGallL~l~~~~~~~~~~------~~ 240 (549)
. +.+ .+-...+.|.++...+=+-++++++|.. ...|..-+ .+
T Consensus 156 --------------~--------------~~i--GNFwvDl~R~~l~vLLPlS~v~AliLv~--qGVpQtf~~~~~v~tl 203 (552)
T PF03814_consen 156 --------------T--------------KTI--GNFWVDLVRSTLRVLLPLSFVFALILVS--QGVPQTFSGYVTVTTL 203 (552)
T ss_pred --------------C--------------CCC--CchHHHHHHHHHHHHHHHHHHHHHHHHh--cCccccccCCceeeee
Confidence 0 001 1122333444444444455666776542 12221000 01
Q ss_pred hh------ccchhHHHHHHHhhhcccCccccccCCccccccc-ChhHHHHHHHHHHHhcccHHHHHHHHHHHHHhhcchh
Q 045809 241 KQ------KGLQIFTFSVFTTASTFSNCGFVPTNENMMVFKK-NALLLLILFPQGLLGNTLYPSCLRFVIWVLKKITNRE 313 (549)
Q Consensus 241 ~~------~~~~~~~~AiF~avSAf~naGFs~~~~sl~~y~~-~~~v~~vi~~liilGGlgF~v~~~~i~~~~~r~~~~~ 313 (549)
+. .|+.+-.+|+=|= .-|-+||=-- +|-.||.| +++.+++=++.|++=....+. ..+|..+
T Consensus 204 eg~~Q~i~~GPvAs~eaIK~L--GTNGGGff~a-NSAhPfENPt~~sN~~e~~~illIP~al~~-------~fG~~~~-- 271 (552)
T PF03814_consen 204 EGATQTIPLGPVASQEAIKQL--GTNGGGFFGA-NSAHPFENPTPLSNFLEMLSILLIPAALPF-------TFGRMVG-- 271 (552)
T ss_pred ccceeeeccCccHHHHHHHHh--ccCCCcccCC-CCCCCCCCChHHHHHHHHHHHHHHHHHHHH-------HHHHHHc--
Confidence 11 1223334444442 2255666322 23346654 456666666655553322221 1222211
Q ss_pred hhHHHHhcchhhHHhhhcchhHHHHHHHHHHHHHHHHHHHHHHHhcc-cccCCCC------CHH------HHHHHHHHHH
Q 045809 314 EFDYILRNSKEMIYRHLLSKAYSYFLAITVFGFIFVQLVLFCALEWD-SEATDGL------NFF------EKLVASLFQV 380 (549)
Q Consensus 314 ~~~~ll~~~r~~~~~~l~~s~~tk~vl~~~~~l~~ig~il~~l~e~~-~~~~~~~------~~~------~~l~~slFqs 380 (549)
+ .+|-+.++....++.+++..+.+..|.. ||.+.+. +.+ ...-.++|.+
T Consensus 272 -------~-----------~rqg~~i~~~m~~lf~~~~~~~~~~E~~gnp~~~~~g~~~~gnmEGKE~RFG~~~Salf~~ 333 (552)
T PF03814_consen 272 -------D-----------RRQGWAIFAVMLVLFIVGLALAYWAESAGNPALAALGIDQGGNMEGKEVRFGIAGSALFAV 333 (552)
T ss_pred -------C-----------ccchHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHhccccCCCCccchheechhhhHHHHH
Confidence 1 1244444555555555555555556654 3322211 111 1244678888
Q ss_pred hcc-CCcccccccCCCchhHHHHHHHHHHhcC----C-cce------EE---e-----cccc-ccccccccCcccchhHH
Q 045809 381 VNS-RHTGESVFDISIISPAILVLFVVMMYLP----P-YTS------FW---P-----SRNR-EGDSRNFKEKKNKKKTF 439 (549)
Q Consensus 381 vSa-rTAGFst~d~~~~s~~~~~lliiLMfIG----g-stt------~~---~-----~r~~-~~~~~~~~~r~i~~~~~ 439 (549)
+++ .++|=...--++++|..-++.++.|.+| | ... +. + .-|| +|. -+||++.+++
T Consensus 334 ~TT~ts~GaVN~mhDS~~PlgG~~~l~~M~L~evfGGvG~Gl~~ml~~~il~VFiaGLMVGRTPEy----LGKKIe~~Em 409 (552)
T PF03814_consen 334 VTTATSTGAVNSMHDSLTPLGGMVPLFNMMLGEVFGGVGSGLYGMLMYVILTVFIAGLMVGRTPEY----LGKKIEAREM 409 (552)
T ss_pred HHHHhcccccccccccCCchhHHHHHHHHHhCCcCCCcchhHHHHHHHHHHHHHHHhHhcCCChHH----hcCccchhhH
Confidence 888 7788666667888999999999999884 3 111 00 0 1222 332 5677776666
Q ss_pred HHHHHHHHHH--HHHHHHHHHHHHcCC-CCCCCCCcccHHHHHHHHhhcccCccCCC-CccCcccCCCCCCCCCcccccc
Q 045809 440 VQNFIFSQLS--YLVIFIILVCITERD-KMKKDPLNFNVLNVTIEVISAYGNVGFST-GYSCKRQLRPDSSCKDAWYGFV 515 (549)
Q Consensus 440 ~~a~~~~~l~--~~~~~~~~l~~~e~~-~~~~~~~~~~~~~~lFEvvSA~gtvGlS~-G~~~~~~~~~~~~~~~~~~s~t 515 (549)
+-+.+...+- ++++++.+-+..... ....+|....+.++++|-.||-+|-|=.. |.
T Consensus 410 k~~~l~iL~~P~liL~~taia~~~p~~~~~~~NpG~HG~SevLYaftSaaaNNGSaF~GL-------------------- 469 (552)
T PF03814_consen 410 KLAALAILVHPLLILVGTAIAVATPAGLASISNPGPHGFSEVLYAFTSAAANNGSAFAGL-------------------- 469 (552)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcccccccCCCCcccHHHHHHHHhhccccCccccccC--------------------
Confidence 6554433322 222222222222221 11223444789999999999999999666 33
Q ss_pred cccChhhHHHHHHHHHhccCCcc
Q 045809 516 GRWSNQGKVILILVMFFGRIKKF 538 (549)
Q Consensus 516 ~~l~~~~Klili~lM~iGRl~~~ 538 (549)
++=+++=-+..-+.|++||--|+
T Consensus 470 ~~nt~f~N~~~g~~MllgRf~~i 492 (552)
T PF03814_consen 470 NANTPFWNITTGIAMLLGRFLPI 492 (552)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHH
Confidence 13344556668889999995543
No 16
>COG2060 KdpA K+-transporting ATPase, A chain [Inorganic ion transport and metabolism]
Probab=97.26 E-value=0.43 Score=51.91 Aligned_cols=142 Identities=20% Similarity=0.136 Sum_probs=80.9
Q ss_pred HHHHHHHHhcc-CCcccccccCCCchhHHHHHHHHHHhcC----C-cceE------Ee--------cccc-ccccccccC
Q 045809 373 LVASLFQVVNS-RHTGESVFDISIISPAILVLFVVMMYLP----P-YTSF------WP--------SRNR-EGDSRNFKE 431 (549)
Q Consensus 373 l~~slFqsvSa-rTAGFst~d~~~~s~~~~~lliiLMfIG----g-stt~------~~--------~r~~-~~~~~~~~~ 431 (549)
...++|-++++ .++|=...--+++.|..-++-++.|.+| | .+.. .+ .-|| +|. -+
T Consensus 333 ~~SaLfav~TTa~s~GaVN~MHdS~tplGg~vpl~~m~L~~v~GGvG~Gl~~ml~fviltVFiagLMVGRTPEy----Lg 408 (560)
T COG2060 333 AASALFAVSTTAASCGAVNAMHDSLTPLGGMVPLFLMQLGEVFGGVGSGLYGMLLFVILTVFIAGLMVGRTPEY----LG 408 (560)
T ss_pred hHHHHHHHHHhhhcccchhhhhccccccccHHHHHHHHhCCCcCCcchhHHHHHHHHHHHHHHHHHhcCCCHHH----hc
Confidence 45688888877 6777444445677888888888888873 3 2211 00 1222 332 45
Q ss_pred cccchhHHHHHHHHHHHH-HHH-HHH-HHHHHHcCCCCCCCCCcccHHHHHHHHhhcccCccCCC-CccCcccCCCCCCC
Q 045809 432 KKNKKKTFVQNFIFSQLS-YLV-IFI-ILVCITERDKMKKDPLNFNVLNVTIEVISAYGNVGFST-GYSCKRQLRPDSSC 507 (549)
Q Consensus 432 r~i~~~~~~~a~~~~~l~-~~~-~~~-~~l~~~e~~~~~~~~~~~~~~~~lFEvvSA~gtvGlS~-G~~~~~~~~~~~~~ 507 (549)
||++.++++-+.+.+..- +++ +.. ..+.+.+......+|....+.++++|-.||-+|-|=.. |.+
T Consensus 409 kKIe~kEmk~~~L~iLv~PllvL~~~Aia~~~p~~~a~i~Npg~HG~SevLYa~tSaaaNNGS~F~Gl~----------- 477 (560)
T COG2060 409 KKIEAKEMKLAALAILVHPLLVLIFTAIALMLPGALASISNPGPHGFSEVLYAYTSAAANNGSAFAGLS----------- 477 (560)
T ss_pred CccchhhHHHHHHHHHHHHHHHHHHHHHHHHCchHHhhCCCCCCccHHHHHHHHHhhcccCcccccccc-----------
Confidence 666666555443322211 111 111 12222111111124445789999999999999998666 331
Q ss_pred CCcccccccccChhhHHHHHHHHHhccCCcc
Q 045809 508 KDAWYGFVGRWSNQGKVILILVMFFGRIKKF 538 (549)
Q Consensus 508 ~~~~~s~t~~l~~~~Klili~lM~iGRl~~~ 538 (549)
+=+++=-+..-+.|++||-.++
T Consensus 478 ---------~nt~f~N~~~g~~MllGRy~~I 499 (560)
T COG2060 478 ---------ANTPFWNLTLGVAMLLGRFLPI 499 (560)
T ss_pred ---------CCCchHhHHHHHHHHHHhHHHH
Confidence 2244555678899999996543
No 17
>TIGR00680 kdpA K+-transporting ATPase, KdpA. Kdp is a high affinity ATP-driven K+ transport system in Escherichia coli. It is composed of three membrane-bound subunits, KdpA, KdpB and KdpC and one small peptide, KdpF. KdpA is the K+-transporting subunit of this complex. During assembly of the complex, KdpA and KdpC bind to each other. This interaction is thought to stabilize the complex [PubMed:9858692]. Data indicates that KdpC might connect the KdpA, the K+-transporting subunit, to KdpB, the ATP-hydrolyzing (energy providing) subunit PubMed:9858692].
Probab=96.80 E-value=1.2 Score=49.26 Aligned_cols=180 Identities=14% Similarity=0.083 Sum_probs=101.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcc-cccCCCC------CHH------HHHHHHHHHHhcc-CCcccccccCCCchhHH
Q 045809 335 YSYFLAITVFGFIFVQLVLFCALEWD-SEATDGL------NFF------EKLVASLFQVVNS-RHTGESVFDISIISPAI 400 (549)
Q Consensus 335 ~tk~vl~~~~~l~~ig~il~~l~e~~-~~~~~~~------~~~------~~l~~slFqsvSa-rTAGFst~d~~~~s~~~ 400 (549)
|-+.++....++.+++..+.+..|.. ||.+... +.+ ...-.++|.++++ .++|=...--++++|..
T Consensus 283 qg~~i~~~m~~lf~~~~~~~~~~E~~gnp~l~~~g~~~~gnmEGKE~RFG~~~Salfa~~TT~tS~GaVN~mhDS~tPlg 362 (563)
T TIGR00680 283 QGWLILWMMFIIYGILIAIAMVGEFQGNPLLNALGGESQPNLEGKEVRFGVVLSALWAVSTTGTSCGAVNGMHDSLTPLG 362 (563)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhccccccCCCcceeeeecchhhHHHHHHHHhhcccchhhhhhccCchh
Confidence 44555555555555555555556753 4433211 111 1245788999988 77886555567888888
Q ss_pred HHHHHHHHhcC-----C-cceE------E---------eccccccccccccCcccchhHHHHHHHHHHHH--HHHHHHHH
Q 045809 401 LVLFVVMMYLP-----P-YTSF------W---------PSRNREGDSRNFKEKKNKKKTFVQNFIFSQLS--YLVIFIIL 457 (549)
Q Consensus 401 ~~lliiLMfIG-----g-stt~------~---------~~r~~~~~~~~~~~r~i~~~~~~~a~~~~~l~--~~~~~~~~ 457 (549)
-++.++.|.+| | .+.+ . .+-+.+|. -+||++.++++-+.+.+.+- ++++++.+
T Consensus 363 G~v~l~~M~LGevifGGvG~Gl~~ml~~~ilaVFiaGLMVGRTPEy----LGKKIe~~EmK~a~l~iLv~P~lvL~~tai 438 (563)
T TIGR00680 363 GMVPLSDMFLGEVIWGGQGTGLAGLFVFLILAVFIAGLMVGRTPEY----LGKKIEKREMKLASLIILIHPIAILIPAAI 438 (563)
T ss_pred hHHHHHHHHHhCcCcCCcchhHHHHHHHHHHHHHhccccccCCchh----cccccchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888773 3 2211 0 12222332 56777766666554433322 22222222
Q ss_pred HHHHcCC-CCCCCCCcccHHHHHHHHhhcccCccCCC-CccCcccCCCCCCCCCcccccccccChhhHHHHHHHHHhccC
Q 045809 458 VCITERD-KMKKDPLNFNVLNVTIEVISAYGNVGFST-GYSCKRQLRPDSSCKDAWYGFVGRWSNQGKVILILVMFFGRI 535 (549)
Q Consensus 458 l~~~e~~-~~~~~~~~~~~~~~lFEvvSA~gtvGlS~-G~~~~~~~~~~~~~~~~~~s~t~~l~~~~Klili~lM~iGRl 535 (549)
-+..... ....+|....+.++++|-.||-+|-|=.. |. ++=+++=-+..-+.|++||-
T Consensus 439 a~~~p~~~~~~~NpGpHG~SevLYaftSaa~NNGSaF~GL--------------------~~nT~f~N~~~g~~MllGRf 498 (563)
T TIGR00680 439 TLAFPDTLAGISNPGPHGISEVLYAYASAANNNGSAFAGL--------------------AANTLWWNLSASFSMIAGRF 498 (563)
T ss_pred HHhccchhhhcCCCCCchHHHHHHHHHhccccCcccccCC--------------------CCCCHHHHHHHHHHHHHHHH
Confidence 2222211 11122334789999999999999999766 33 13344556678889999995
Q ss_pred Ccc
Q 045809 536 KKF 538 (549)
Q Consensus 536 ~~~ 538 (549)
-|+
T Consensus 499 ~~i 501 (563)
T TIGR00680 499 VPI 501 (563)
T ss_pred HHH
Confidence 543
No 18
>TIGR00680 kdpA K+-transporting ATPase, KdpA. Kdp is a high affinity ATP-driven K+ transport system in Escherichia coli. It is composed of three membrane-bound subunits, KdpA, KdpB and KdpC and one small peptide, KdpF. KdpA is the K+-transporting subunit of this complex. During assembly of the complex, KdpA and KdpC bind to each other. This interaction is thought to stabilize the complex [PubMed:9858692]. Data indicates that KdpC might connect the KdpA, the K+-transporting subunit, to KdpB, the ATP-hydrolyzing (energy providing) subunit PubMed:9858692].
Probab=83.76 E-value=27 Score=38.94 Aligned_cols=39 Identities=10% Similarity=0.160 Sum_probs=29.4
Q ss_pred cchhheecccccccccceeeCCccChHHHHHHHHHHHHh
Q 045809 75 IDVFFTSVSAMTGSSMSTVEMEVFSNFQLIIMTILMFVG 113 (549)
Q Consensus 75 ~DAlF~avSAvt~TGLs~vd~~~~s~~gq~vl~~LiqiG 113 (549)
--|+|.++..-+.||-.----+.+++.+-.+.++.||+|
T Consensus 335 ~Salfa~~TT~tS~GaVN~mhDS~tPlgG~v~l~~M~LG 373 (563)
T TIGR00680 335 LSALWAVSTTGTSCGAVNGMHDSLTPLGGMVPLSDMFLG 373 (563)
T ss_pred hhHHHHHHHHhhcccchhhhhhccCchhhHHHHHHHHHh
Confidence 468999988888888432223889887778888888884
No 19
>PF07885 Ion_trans_2: Ion channel; InterPro: IPR013099 This entry includes the two membrane helix type ion channels found in bacteria []. ; PDB: 1KKD_A 2A0L_A 1ORQ_C 3UKM_C 1LNQ_E 3OUS_A 3LDC_A 3LDD_A 3RBZ_A 3LDE_A ....
Probab=77.39 E-value=8.6 Score=31.14 Aligned_cols=40 Identities=20% Similarity=0.456 Sum_probs=30.5
Q ss_pred ccHHHHHHHHhhcccCccCCCCccCcccCCCCCCCCCcccccccccChhhHHHHHHHHHhc
Q 045809 473 FNVLNVTIEVISAYGNVGFSTGYSCKRQLRPDSSCKDAWYGFVGRWSNQGKVILILVMFFG 533 (549)
Q Consensus 473 ~~~~~~lFEvvSA~gtvGlS~G~~~~~~~~~~~~~~~~~~s~t~~l~~~~Klili~lM~iG 533 (549)
.++.++++=++..+.|+|+ |+. .+. ++.+|++.++.|+.|
T Consensus 23 ~~~~da~yfs~~t~tTvGy--GDi------------------~p~-t~~gr~~~~~~~~~G 62 (79)
T PF07885_consen 23 WSFIDALYFSFVTITTVGY--GDI------------------VPQ-TPAGRIFTIIYMLIG 62 (79)
T ss_dssp TSHHHHHHHHHHHHTT-----SSS------------------STS-SHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcccC--CCc------------------cCC-ccchHHHHHHHHHHH
Confidence 6889999999999999995 541 235 888999999999987
No 20
>PF03814 KdpA: Potassium-transporting ATPase A subunit; InterPro: IPR004623 Kdp is a high affinity ATP-driven K+ transport system in Escherichia coli. It is composed of three membrane-bound subunits, KdpA, KdpB and KdpC and one small peptide, KdpF. KdpA is the K+-transporting subunit of this complex. During assembly of the complex, KdpA and KdpC bind to each other. This interaction is thought to stabilise the complex. Data indicates that KdpC might connect the KdpA, the K+-transporting subunit, to KdpB, the ATP-hydrolysing (energy providing) subunit [].; GO: 0008556 potassium-transporting ATPase activity, 0006813 potassium ion transport, 0005886 plasma membrane
Probab=73.21 E-value=94 Score=34.89 Aligned_cols=39 Identities=13% Similarity=0.206 Sum_probs=30.1
Q ss_pred cchhheecccccccccceeeCCccChHHHHHHHHHHHHh
Q 045809 75 IDVFFTSVSAMTGSSMSTVEMEVFSNFQLIIMTILMFVG 113 (549)
Q Consensus 75 ~DAlF~avSAvt~TGLs~vd~~~~s~~gq~vl~~LiqiG 113 (549)
--|+|.+++.-+.||-.----+.+++.+-.+.++.||+|
T Consensus 327 ~Salf~~~TT~ts~GaVN~mhDS~~PlgG~~~l~~M~L~ 365 (552)
T PF03814_consen 327 GSALFAVVTTATSTGAVNSMHDSLTPLGGMVPLFNMMLG 365 (552)
T ss_pred hhHHHHHHHHHhcccccccccccCCchhHHHHHHHHHhC
Confidence 358899998888888432223889988888888999976
No 21
>PF07885 Ion_trans_2: Ion channel; InterPro: IPR013099 This entry includes the two membrane helix type ion channels found in bacteria []. ; PDB: 1KKD_A 2A0L_A 1ORQ_C 3UKM_C 1LNQ_E 3OUS_A 3LDC_A 3LDD_A 3RBZ_A 3LDE_A ....
Probab=52.33 E-value=49 Score=26.61 Aligned_cols=60 Identities=17% Similarity=0.221 Sum_probs=35.8
Q ss_pred HHHHHHhhcCCCCCCCCCCCcccchhheecccccccccceeeCCccChHHHHHHHHHHHHhhhHHH
Q 045809 53 SVGYLILRVSKPRDSSFINPKNIDVFFTSVSAMTGSSMSTVEMEVFSNFQLIIMTILMFVGGEVFI 118 (549)
Q Consensus 53 ~iG~~lL~l~~~~~~~~~~~s~~DAlF~avSAvt~TGLs~vd~~~~s~~gq~vl~~LiqiGGlg~~ 118 (549)
..|++.... .+. .++.++.||++-+...+|+.|.- |...-+..++++..+.+.+|=..+.
T Consensus 8 ~~~~~~~~~---~~~-~~~~~~~da~yfs~~t~tTvGyG--Di~p~t~~gr~~~~~~~~~G~~~~~ 67 (79)
T PF07885_consen 8 AFGAIFFYI---SEG-SEKWSFIDALYFSFVTITTVGYG--DIVPQTPAGRIFTIIYMLIGIFLFA 67 (79)
T ss_dssp HHHHHHHHH---TTS-SSTTSHHHHHHHHHHHHTT---S--SSSTSSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH---HHh-cccCCHHHHHHHHHHHHhcccCC--CccCCccchHHHHHHHHHHHHHHHH
Confidence 445555554 111 24578999999999999999954 3322277788877666555544333
No 22
>COG2060 KdpA K+-transporting ATPase, A chain [Inorganic ion transport and metabolism]
Probab=51.66 E-value=3.5e+02 Score=30.26 Aligned_cols=37 Identities=16% Similarity=0.338 Sum_probs=26.0
Q ss_pred cchhheecccccccccceee-C-CccChHHHHHHHHHHHHh
Q 045809 75 IDVFFTSVSAMTGSSMSTVE-M-EVFSNFQLIIMTILMFVG 113 (549)
Q Consensus 75 ~DAlF~avSAvt~TGLs~vd-~-~~~s~~gq~vl~~LiqiG 113 (549)
..|+|..+-.-+.|| -|| + +.|++.|-.+-+++||+|
T Consensus 334 ~SaLfav~TTa~s~G--aVN~MHdS~tplGg~vpl~~m~L~ 372 (560)
T COG2060 334 ASALFAVSTTAASCG--AVNAMHDSLTPLGGMVPLFLMQLG 372 (560)
T ss_pred HHHHHHHHHhhhccc--chhhhhccccccccHHHHHHHHhC
Confidence 457787655555555 244 5 789988888889999975
No 23
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=51.62 E-value=1.2e+02 Score=35.87 Aligned_cols=47 Identities=6% Similarity=0.263 Sum_probs=35.4
Q ss_pred CCCCCHHHHHHHHHHHHhcc-CCcccccccCCCchhHHHHHHHHHHhcCC
Q 045809 364 TDGLNFFEKLVASLFQVVNS-RHTGESVFDISIISPAILVLFVVMMYLPP 412 (549)
Q Consensus 364 ~~~~~~~~~l~~slFqsvSa-rTAGFst~d~~~~s~~~~~lliiLMfIGg 412 (549)
+.+.+++.+...|++-++.+ .|.|| .|+...++.-.++.+++|++|.
T Consensus 242 ~~~~s~~~~Yi~slYwai~TmtTVGY--GDi~p~t~~E~i~~i~~ml~g~ 289 (823)
T PLN03192 242 FRETSLWIRYISAIYWSITTMTTVGY--GDLHAVNTIEMIFIIFYMLFNL 289 (823)
T ss_pred cccCcHHHHHHHHHHHHHHHHhhccC--CCcCCCccchHHHHHHHHHHHH
Confidence 33457788888999999988 78887 4555666677788888888764
No 24
>PF12616 DUF3775: Protein of unknown function (DUF3775); InterPro: IPR022254 This domain family is found in bacteria, and is approximately 80 amino acids in length. There is a single completely conserved residue G that may be functionally important.
Probab=30.84 E-value=35 Score=27.99 Aligned_cols=23 Identities=22% Similarity=0.528 Sum_probs=19.7
Q ss_pred ccccChhhHHHHHHHHHhccCCcc
Q 045809 515 VGRWSNQGKVILILVMFFGRIKKF 538 (549)
Q Consensus 515 t~~l~~~~Klili~lM~iGRl~~~ 538 (549)
-.++++--+.=+..+||+|| |-+
T Consensus 10 I~~l~~deqaeLvALmwiGR-Gd~ 32 (75)
T PF12616_consen 10 IEDLNEDEQAELVALMWIGR-GDF 32 (75)
T ss_pred HHhCCHHHHHHHHHHHHhcC-CCC
Confidence 45789999999999999999 644
No 25
>PRK10537 voltage-gated potassium channel; Provisional
Probab=29.50 E-value=5.2e+02 Score=27.91 Aligned_cols=39 Identities=15% Similarity=0.205 Sum_probs=26.3
Q ss_pred HHHHHHHHHhcc-CCcccccccCCCchhHHHHHHHHHHhcCC
Q 045809 372 KLVASLFQVVNS-RHTGESVFDISIISPAILVLFVVMMYLPP 412 (549)
Q Consensus 372 ~l~~slFqsvSa-rTAGFst~d~~~~s~~~~~lliiLMfIGg 412 (549)
.+.+|++.++.+ .|.|| .|+...++..+++.+.+|+.|-
T Consensus 168 s~~dA~y~svvt~tTvGy--Gdi~p~t~~grl~~i~~ii~Gi 207 (393)
T PRK10537 168 SLSTAFYFSIVTMSTVGY--GDIVPVSESARLFTISVIILGI 207 (393)
T ss_pred CHHHHHHhhheeeecccC--CCCCCCCHHHHHHHHHHHHHHH
Confidence 455566666666 88998 4555666777788777776653
No 26
>PRK10537 voltage-gated potassium channel; Provisional
Probab=26.96 E-value=2.9e+02 Score=29.81 Aligned_cols=42 Identities=12% Similarity=0.166 Sum_probs=25.6
Q ss_pred CCcccchhheecccccccccceeeCCccChHHHHHHHHHHHHhh
Q 045809 71 NPKNIDVFFTSVSAMTGSSMSTVEMEVFSNFQLIIMTILMFVGG 114 (549)
Q Consensus 71 ~~s~~DAlF~avSAvt~TGLs~vd~~~~s~~gq~vl~~LiqiGG 114 (549)
..++.||++-++-.+|+.|-- |....+..|.++.+++|..|-
T Consensus 166 ~~s~~dA~y~svvt~tTvGyG--di~p~t~~grl~~i~~ii~Gi 207 (393)
T PRK10537 166 IESLSTAFYFSIVTMSTVGYG--DIVPVSESARLFTISVIILGI 207 (393)
T ss_pred CCCHHHHHHhhheeeecccCC--CCCCCCHHHHHHHHHHHHHHH
Confidence 468999999777666655542 222335567666666665443
Done!